Query 015029
Match_columns 414
No_of_seqs 406 out of 4052
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 05:24:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015029.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015029hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2kmw_A Uncharacterized protein 99.9 5.7E-24 1.9E-28 183.3 4.4 105 214-341 5-110 (150)
2 1ejf_A Progesterone receptor P 99.9 7.1E-23 2.4E-27 171.8 6.4 103 215-340 5-109 (125)
3 2xcm_C SGT1-like protein, cyto 99.9 8E-22 2.7E-26 156.6 9.6 91 212-302 1-91 (92)
4 4gco_A Protein STI-1; structur 99.8 6.6E-20 2.3E-24 153.6 17.9 113 2-114 13-125 (126)
5 1wh0_A Ubiquitin carboxyl-term 99.8 1.8E-21 6.2E-26 164.2 8.1 91 213-303 19-122 (134)
6 2cg9_X CO-chaperone protein SB 99.8 2.9E-22 9.9E-27 169.8 1.8 104 214-340 7-126 (134)
7 1x5m_A Calcyclin-binding prote 99.8 1.3E-20 4.6E-25 158.4 11.1 90 213-302 20-114 (127)
8 1rl1_A Suppressor of G2 allele 99.8 8.2E-21 2.8E-25 156.9 9.2 95 211-305 7-101 (114)
9 2hr2_A Hypothetical protein; a 99.8 1.1E-18 3.7E-23 151.6 10.7 117 1-117 10-149 (159)
10 3rkv_A Putative peptidylprolyl 99.8 1.2E-17 4E-22 144.7 15.5 117 2-118 11-146 (162)
11 3upv_A Heat shock protein STI1 99.8 2.8E-17 9.7E-22 135.9 16.7 113 2-114 4-122 (126)
12 2o30_A Nuclear movement protei 99.7 2.7E-18 9.1E-23 145.1 9.3 122 214-384 5-127 (131)
13 4gcn_A Protein STI-1; structur 99.7 5.1E-17 1.8E-21 135.9 15.7 112 2-114 8-126 (127)
14 1wgv_A KIAA1068 protein; CS do 99.7 3.8E-17 1.3E-21 136.7 11.1 91 214-304 20-113 (124)
15 3gyz_A Chaperone protein IPGC; 99.7 2.7E-16 9.1E-21 136.2 16.5 103 2-104 36-138 (151)
16 2jtt_C Calcyclin-binding prote 99.7 2E-18 6.9E-23 108.1 1.8 32 352-383 4-35 (35)
17 3sz7_A HSC70 cochaperone (SGT) 99.7 4.1E-16 1.4E-20 135.2 16.4 113 2-114 11-125 (164)
18 2vgx_A Chaperone SYCD; alterna 99.7 5E-16 1.7E-20 133.4 16.1 115 3-117 22-136 (148)
19 2xcb_A PCRH, regulatory protei 99.7 6.2E-16 2.1E-20 131.2 15.7 115 3-117 19-133 (142)
20 4ga2_A E3 SUMO-protein ligase 99.7 4.8E-16 1.6E-20 133.7 14.8 111 4-114 33-144 (150)
21 3q49_B STIP1 homology and U bo 99.6 5.1E-15 1.7E-19 123.2 16.2 114 2-115 9-127 (137)
22 2fbn_A 70 kDa peptidylprolyl i 99.6 9.5E-15 3.3E-19 130.5 17.8 118 2-119 38-171 (198)
23 1p5q_A FKBP52, FK506-binding p 99.6 1.5E-14 5E-19 141.2 19.8 122 2-123 147-283 (336)
24 1elw_A TPR1-domain of HOP; HOP 99.6 2.5E-14 8.4E-19 114.6 17.6 113 2-114 4-116 (118)
25 3urz_A Uncharacterized protein 99.6 7.5E-15 2.6E-19 132.9 15.7 113 2-114 4-132 (208)
26 1wfi_A Nuclear distribution ge 99.6 1.9E-15 6.6E-20 127.6 10.9 87 214-303 8-99 (131)
27 2rh0_A NUDC domain-containing 99.6 8.9E-16 3.1E-20 133.2 8.9 86 213-302 13-103 (157)
28 1hxi_A PEX5, peroxisome target 99.6 4.4E-15 1.5E-19 123.0 12.8 102 4-105 19-120 (121)
29 1kt0_A FKBP51, 51 kDa FK506-bi 99.6 9.5E-15 3.2E-19 148.6 17.2 120 2-121 268-402 (457)
30 2xev_A YBGF; tetratricopeptide 99.6 2.2E-14 7.4E-19 118.1 15.7 114 1-114 1-120 (129)
31 1a17_A Serine/threonine protei 99.6 1.1E-13 3.9E-18 118.2 20.3 113 2-114 13-125 (166)
32 2vyi_A SGTA protein; chaperone 99.6 8.6E-14 2.9E-18 113.3 18.5 114 2-115 12-125 (131)
33 2lni_A Stress-induced-phosphop 99.6 2E-14 6.9E-19 118.0 14.7 113 2-114 16-128 (133)
34 2dba_A Smooth muscle cell asso 99.6 2.9E-14 1E-18 119.5 15.8 113 2-114 28-143 (148)
35 4gyw_A UDP-N-acetylglucosamine 99.6 3.1E-14 1.1E-18 152.6 19.7 126 2-127 9-134 (723)
36 2pl2_A Hypothetical conserved 99.6 4.2E-14 1.4E-18 128.7 16.8 128 2-129 5-143 (217)
37 1elr_A TPR2A-domain of HOP; HO 99.6 9.1E-14 3.1E-18 113.4 16.2 115 2-117 4-125 (131)
38 3qor_A Nuclear migration prote 99.6 1E-14 3.6E-19 121.2 10.4 88 214-304 17-109 (121)
39 1ihg_A Cyclophilin 40; ppiase 99.6 3.1E-14 1.1E-18 141.0 15.5 118 2-119 223-356 (370)
40 4i17_A Hypothetical protein; T 99.6 1.6E-13 5.3E-18 124.8 18.2 105 2-106 7-112 (228)
41 4gyw_A UDP-N-acetylglucosamine 99.6 1.1E-13 3.7E-18 148.4 19.7 128 2-129 43-170 (723)
42 2h6f_A Protein farnesyltransfe 99.6 8.8E-14 3E-18 138.4 17.5 127 2-128 97-224 (382)
43 2pl2_A Hypothetical conserved 99.6 2.1E-13 7.3E-18 124.1 18.6 128 2-130 39-177 (217)
44 3vtx_A MAMA; tetratricopeptide 99.5 4.5E-13 1.5E-17 117.4 19.8 124 2-125 5-128 (184)
45 4ga2_A E3 SUMO-protein ligase 99.5 8.7E-15 3E-19 125.7 8.5 114 8-121 3-116 (150)
46 1na0_A Designed protein CTPR3; 99.5 5.6E-13 1.9E-17 107.5 18.3 113 2-114 9-121 (125)
47 2h6f_A Protein farnesyltransfe 99.5 1.2E-13 4.3E-18 137.3 14.8 115 2-116 131-246 (382)
48 1zu2_A Mitochondrial import re 99.5 7.5E-14 2.6E-18 120.9 11.0 103 12-114 12-135 (158)
49 2if4_A ATFKBP42; FKBP-like, al 99.5 2.4E-14 8.2E-19 139.9 8.5 113 2-114 179-308 (338)
50 3k9i_A BH0479 protein; putativ 99.5 4.6E-14 1.6E-18 115.4 7.9 101 14-114 2-105 (117)
51 2c2l_A CHIP, carboxy terminus 99.5 2.3E-13 7.9E-18 129.2 13.8 102 2-103 4-105 (281)
52 4i17_A Hypothetical protein; T 99.5 8.3E-13 2.8E-17 120.0 16.9 116 3-118 43-167 (228)
53 2kck_A TPR repeat; tetratricop 99.5 2.7E-13 9.1E-18 107.6 11.3 100 4-103 8-110 (112)
54 3vtx_A MAMA; tetratricopeptide 99.5 3.6E-12 1.2E-16 111.6 19.7 128 2-129 39-166 (184)
55 3urz_A Uncharacterized protein 99.5 1.6E-12 5.3E-17 117.5 16.6 105 8-113 60-199 (208)
56 2fo7_A Synthetic consensus TPR 99.5 5.6E-12 1.9E-16 102.5 18.3 117 3-119 2-118 (136)
57 2e2e_A Formate-dependent nitri 99.5 1.9E-12 6.5E-17 112.9 15.9 112 3-114 45-159 (177)
58 3gyz_A Chaperone protein IPGC; 99.4 1.5E-13 5.2E-18 118.7 7.8 112 21-132 21-132 (151)
59 3as5_A MAMA; tetratricopeptide 99.4 1.4E-11 4.7E-16 106.2 20.3 111 5-115 45-155 (186)
60 1hh8_A P67PHOX, NCF-2, neutrop 99.4 4.2E-12 1.4E-16 113.6 16.5 124 3-129 7-146 (213)
61 3uq3_A Heat shock protein STI1 99.4 3.3E-12 1.1E-16 116.6 15.9 111 3-113 140-256 (258)
62 3qky_A Outer membrane assembly 99.4 3.1E-12 1E-16 118.9 15.9 106 2-107 15-134 (261)
63 1xnf_A Lipoprotein NLPI; TPR, 99.4 1.3E-11 4.3E-16 114.1 19.7 112 2-113 43-154 (275)
64 1hh8_A P67PHOX, NCF-2, neutrop 99.4 3.8E-12 1.3E-16 113.8 14.6 103 2-104 37-155 (213)
65 1wao_1 Serine/threonine protei 99.4 4.8E-13 1.6E-17 136.8 9.7 112 3-114 7-118 (477)
66 4gco_A Protein STI-1; structur 99.4 2.2E-12 7.5E-17 107.4 11.9 103 27-129 4-106 (126)
67 2l6j_A TPR repeat-containing p 99.4 4.8E-13 1.7E-17 106.7 6.9 94 2-95 4-103 (111)
68 2vsy_A XCC0866; transferase, g 99.4 1.3E-11 4.4E-16 128.2 19.1 130 2-131 23-155 (568)
69 3uq3_A Heat shock protein STI1 99.4 1.5E-11 5E-16 112.2 17.3 128 2-129 79-232 (258)
70 3as5_A MAMA; tetratricopeptide 99.4 1.4E-11 4.9E-16 106.1 16.2 128 2-129 8-135 (186)
71 2q7f_A YRRB protein; TPR, prot 99.4 3.4E-11 1.2E-15 109.1 19.3 123 3-125 58-180 (243)
72 3qou_A Protein YBBN; thioredox 99.4 1.6E-11 5.4E-16 116.7 17.3 122 3-124 118-275 (287)
73 2q7f_A YRRB protein; TPR, prot 99.4 5E-11 1.7E-15 107.9 19.8 117 3-119 24-140 (243)
74 1fch_A Peroxisomal targeting s 99.4 1.6E-11 5.5E-16 118.5 16.8 120 3-122 218-348 (368)
75 2vgx_A Chaperone SYCD; alterna 99.4 2.8E-12 9.4E-17 109.9 10.0 112 22-133 7-118 (148)
76 2pzi_A Probable serine/threoni 99.3 3.8E-12 1.3E-16 135.8 13.2 121 3-124 434-554 (681)
77 3ieg_A DNAJ homolog subfamily 99.3 2.3E-11 8E-16 116.1 17.5 111 2-112 3-116 (359)
78 3ieg_A DNAJ homolog subfamily 99.3 3.2E-11 1.1E-15 115.1 18.4 114 5-118 237-354 (359)
79 4abn_A Tetratricopeptide repea 99.3 9.1E-12 3.1E-16 127.0 15.1 115 2-117 102-226 (474)
80 2vq2_A PILW, putative fimbrial 99.3 5.6E-11 1.9E-15 106.0 18.5 124 3-126 9-135 (225)
81 2yhc_A BAMD, UPF0169 lipoprote 99.3 2.3E-11 7.9E-16 110.9 15.9 108 2-109 4-135 (225)
82 4abn_A Tetratricopeptide repea 99.3 1E-11 3.4E-16 126.7 14.9 119 3-121 171-309 (474)
83 3u4t_A TPR repeat-containing p 99.3 2.6E-11 9E-16 112.1 16.1 118 2-119 74-191 (272)
84 3qky_A Outer membrane assembly 99.3 3.6E-11 1.2E-15 111.6 16.7 116 2-117 52-198 (261)
85 2e2e_A Formate-dependent nitri 99.3 8.3E-12 2.8E-16 108.8 11.6 123 9-131 17-142 (177)
86 4eqf_A PEX5-related protein; a 99.3 2.1E-11 7.1E-16 118.3 15.5 127 6-132 181-309 (365)
87 4eqf_A PEX5-related protein; a 99.3 2.4E-11 8.2E-16 117.8 15.7 102 2-103 213-314 (365)
88 2ho1_A Type 4 fimbrial biogene 99.3 4.5E-11 1.5E-15 109.4 16.4 120 3-122 38-159 (252)
89 2ho1_A Type 4 fimbrial biogene 99.3 6.8E-11 2.3E-15 108.1 17.6 127 3-129 72-200 (252)
90 2vq2_A PILW, putative fimbrial 99.3 9.4E-11 3.2E-15 104.5 17.9 129 3-131 43-174 (225)
91 2kat_A Uncharacterized protein 99.3 3.1E-11 1.1E-15 97.7 13.4 84 19-102 2-85 (115)
92 2r5s_A Uncharacterized protein 99.3 3.9E-11 1.3E-15 104.9 14.7 117 4-120 8-160 (176)
93 1w3b_A UDP-N-acetylglucosamine 99.3 5.7E-11 2E-15 116.3 17.1 109 6-114 37-145 (388)
94 2fo7_A Synthetic consensus TPR 99.3 7.7E-11 2.6E-15 95.6 15.2 101 3-103 36-136 (136)
95 3u4t_A TPR repeat-containing p 99.3 1.9E-11 6.4E-16 113.1 12.4 117 3-119 4-123 (272)
96 2xcb_A PCRH, regulatory protei 99.3 1.3E-11 4.3E-16 104.3 10.2 110 23-132 5-114 (142)
97 2pzi_A Probable serine/threoni 99.3 7E-12 2.4E-16 133.7 10.5 112 2-114 467-578 (681)
98 1w3b_A UDP-N-acetylglucosamine 99.3 1E-10 3.5E-15 114.5 17.9 115 5-119 172-286 (388)
99 3hym_B Cell division cycle pro 99.3 1.1E-10 3.6E-15 110.5 17.2 126 4-129 92-218 (330)
100 2y4t_A DNAJ homolog subfamily 99.3 1.5E-10 5.1E-15 115.0 18.8 109 2-110 26-137 (450)
101 2yhc_A BAMD, UPF0169 lipoprote 99.3 8.4E-11 2.9E-15 107.1 15.5 122 3-124 42-204 (225)
102 3cv0_A Peroxisome targeting si 99.3 1.3E-10 4.5E-15 109.6 17.3 115 3-117 173-299 (327)
103 2gw1_A Mitochondrial precursor 99.3 6.3E-11 2.2E-15 119.4 15.8 103 2-105 6-108 (514)
104 3hym_B Cell division cycle pro 99.2 1.9E-10 6.4E-15 108.7 16.7 125 5-129 25-150 (330)
105 1na3_A Designed protein CTPR2; 99.2 1.5E-10 5.1E-15 88.6 13.0 79 5-83 12-90 (91)
106 2y4t_A DNAJ homolog subfamily 99.2 2.1E-10 7.3E-15 113.9 17.7 115 5-119 260-378 (450)
107 2kc7_A BFR218_protein; tetratr 99.2 2.8E-11 9.6E-16 95.0 7.9 91 5-103 3-94 (99)
108 1fch_A Peroxisomal targeting s 99.2 3.1E-10 1.1E-14 109.4 17.0 123 8-131 188-312 (368)
109 3mkr_A Coatomer subunit epsilo 99.2 3E-10 1E-14 108.2 16.0 119 3-121 131-251 (291)
110 3mkr_A Coatomer subunit epsilo 99.2 6.9E-10 2.4E-14 105.7 18.3 100 14-113 178-278 (291)
111 3sz7_A HSC70 cochaperone (SGT) 99.2 2.2E-10 7.4E-15 98.8 13.5 104 32-135 7-110 (164)
112 3upv_A Heat shock protein STI1 99.2 2.6E-10 9E-15 93.5 13.4 97 33-129 1-97 (126)
113 3fp2_A TPR repeat-containing p 99.2 3E-10 1E-14 115.4 15.8 125 4-128 278-402 (537)
114 1p5q_A FKBP52, FK506-binding p 99.2 2.1E-10 7E-15 111.7 13.8 96 2-97 196-292 (336)
115 1xnf_A Lipoprotein NLPI; TPR, 99.2 1.6E-10 5.4E-15 106.7 12.1 118 13-130 16-137 (275)
116 3cv0_A Peroxisome targeting si 99.2 3E-10 1E-14 107.2 14.3 107 4-110 23-129 (327)
117 1a17_A Serine/threonine protei 99.2 5.4E-10 1.8E-14 95.0 13.9 96 3-98 48-145 (166)
118 3edt_B KLC 2, kinesin light ch 99.2 2.6E-10 8.8E-15 105.0 12.7 130 2-131 43-196 (283)
119 2vsy_A XCC0866; transferase, g 99.1 2.6E-10 9E-15 118.3 13.7 115 15-129 2-116 (568)
120 1qqe_A Vesicular transport pro 99.1 3.4E-10 1.2E-14 107.5 13.4 103 2-104 77-192 (292)
121 3ma5_A Tetratricopeptide repea 99.1 4.4E-10 1.5E-14 89.2 11.6 72 31-102 2-73 (100)
122 4gcn_A Protein STI-1; structur 99.1 2.4E-10 8.2E-15 94.9 10.4 92 35-126 7-105 (127)
123 3fp2_A TPR repeat-containing p 99.1 1E-09 3.5E-14 111.4 16.4 128 2-130 243-370 (537)
124 3q49_B STIP1 homology and U bo 99.1 1.8E-09 6E-14 89.2 14.8 100 30-129 3-102 (137)
125 4g1t_A Interferon-induced prot 99.1 2E-09 6.7E-14 107.8 17.8 115 3-117 52-185 (472)
126 1qqe_A Vesicular transport pro 99.1 2.2E-10 7.6E-15 108.7 10.3 104 2-105 117-234 (292)
127 1na3_A Designed protein CTPR2; 99.1 1E-09 3.5E-14 83.9 11.9 81 34-114 7-87 (91)
128 1hxi_A PEX5, peroxisome target 99.1 1.6E-09 5.6E-14 89.1 13.8 91 38-128 19-109 (121)
129 2l6j_A TPR repeat-containing p 99.1 1E-09 3.5E-14 87.0 11.8 80 35-114 3-88 (111)
130 2xpi_A Anaphase-promoting comp 99.1 3.6E-09 1.2E-13 109.0 18.6 126 4-129 375-500 (597)
131 2xpi_A Anaphase-promoting comp 99.1 4E-09 1.4E-13 108.7 18.4 95 5-99 410-504 (597)
132 2kck_A TPR repeat; tetratricop 99.1 7.2E-10 2.4E-14 87.4 9.9 87 31-117 1-89 (112)
133 4a1s_A PINS, partner of inscut 99.1 1.6E-09 5.3E-14 106.4 14.4 118 2-119 48-181 (411)
134 3edt_B KLC 2, kinesin light ch 99.1 8.7E-10 3E-14 101.4 11.8 98 2-99 85-198 (283)
135 3ro3_A PINS homolog, G-protein 99.1 1.8E-09 6.2E-14 90.3 12.6 125 2-126 9-151 (164)
136 1ouv_A Conserved hypothetical 99.1 8.2E-09 2.8E-13 96.0 18.4 109 2-116 6-122 (273)
137 2vyi_A SGTA protein; chaperone 99.0 2.1E-09 7.2E-14 86.8 12.3 84 3-86 47-130 (131)
138 2gw1_A Mitochondrial precursor 99.0 1.3E-09 4.3E-14 109.8 13.1 120 5-124 341-469 (514)
139 2ond_A Cleavage stimulation fa 99.0 3.9E-09 1.3E-13 100.7 15.1 121 3-123 100-222 (308)
140 2fbn_A 70 kDa peptidylprolyl i 99.0 1.6E-09 5.4E-14 96.3 11.2 95 3-97 89-184 (198)
141 1kt0_A FKBP51, 51 kDa FK506-bi 99.0 1.1E-09 3.7E-14 111.1 11.3 91 2-92 317-407 (457)
142 3ro2_A PINS homolog, G-protein 99.0 3.8E-09 1.3E-13 99.1 14.0 118 2-119 5-138 (338)
143 3ulq_A Response regulator aspa 99.0 2.4E-09 8.2E-14 104.9 12.9 128 2-129 143-289 (383)
144 3sf4_A G-protein-signaling mod 99.0 3.5E-09 1.2E-13 103.0 13.4 118 2-119 9-142 (406)
145 3rkv_A Putative peptidylprolyl 99.0 1.8E-09 6E-14 92.8 10.0 86 3-88 64-150 (162)
146 2hr2_A Hypothetical protein; a 99.0 5.5E-09 1.9E-13 90.4 12.6 94 36-129 11-127 (159)
147 3nf1_A KLC 1, kinesin light ch 99.0 3.2E-09 1.1E-13 99.3 12.2 129 3-131 70-222 (311)
148 2if4_A ATFKBP42; FKBP-like, al 99.0 3.9E-10 1.3E-14 109.8 6.0 102 4-105 232-334 (338)
149 1pc2_A Mitochondria fission pr 99.0 6.5E-09 2.2E-13 89.0 12.7 99 17-115 13-116 (152)
150 2lni_A Stress-induced-phosphop 99.0 3.3E-09 1.1E-13 86.3 10.6 83 3-85 51-133 (133)
151 3k9i_A BH0479 protein; putativ 99.0 5.6E-09 1.9E-13 84.7 11.7 83 3-85 28-110 (117)
152 1wao_1 Serine/threonine protei 98.9 7.7E-10 2.6E-14 113.0 7.1 101 2-102 40-153 (477)
153 3nf1_A KLC 1, kinesin light ch 98.9 4.4E-09 1.5E-13 98.3 11.7 127 2-128 27-177 (311)
154 2qfc_A PLCR protein; TPR, HTH, 98.9 2.4E-08 8.2E-13 94.4 16.5 119 5-123 118-255 (293)
155 1ouv_A Conserved hypothetical 98.9 5E-08 1.7E-12 90.6 18.3 107 3-115 39-157 (273)
156 3gw4_A Uncharacterized protein 98.9 5.2E-09 1.8E-13 92.0 10.9 126 2-127 26-170 (203)
157 2kc7_A BFR218_protein; tetratr 98.9 9.6E-09 3.3E-13 80.2 11.2 69 39-107 3-72 (99)
158 3u3w_A Transcriptional activat 98.9 2.9E-09 9.8E-14 100.8 9.6 96 4-99 157-266 (293)
159 3u3w_A Transcriptional activat 98.9 4.8E-09 1.6E-13 99.2 11.1 125 6-130 119-263 (293)
160 2qfc_A PLCR protein; TPR, HTH, 98.9 7.4E-09 2.5E-13 97.9 12.4 99 2-100 155-267 (293)
161 2ond_A Cleavage stimulation fa 98.9 1.7E-08 6E-13 96.1 14.9 106 3-108 51-172 (308)
162 1elw_A TPR1-domain of HOP; HOP 98.9 2.9E-08 9.8E-13 78.6 13.4 93 35-127 3-95 (118)
163 2ifu_A Gamma-SNAP; membrane fu 98.9 4.1E-09 1.4E-13 100.7 10.0 99 3-103 117-227 (307)
164 1ihg_A Cyclophilin 40; ppiase 98.9 7.7E-09 2.6E-13 102.1 12.1 90 3-92 274-363 (370)
165 2xev_A YBGF; tetratricopeptide 98.9 1.6E-08 5.6E-13 82.4 12.1 96 37-132 3-104 (129)
166 3ma5_A Tetratricopeptide repea 98.9 7.3E-09 2.5E-13 82.0 9.7 84 2-85 7-92 (100)
167 3q15_A PSP28, response regulat 98.9 1.4E-08 4.7E-13 99.4 13.7 132 2-133 141-290 (378)
168 3ro3_A PINS homolog, G-protein 98.9 1.1E-08 3.6E-13 85.5 11.1 100 3-102 50-161 (164)
169 3ulq_A Response regulator aspa 98.9 4.9E-09 1.7E-13 102.7 10.2 125 6-130 107-250 (383)
170 3dra_A Protein farnesyltransfe 98.9 5.7E-08 2E-12 93.4 17.4 113 6-118 36-158 (306)
171 4g1t_A Interferon-induced prot 98.9 2.7E-08 9.1E-13 99.6 15.7 112 3-114 95-219 (472)
172 2dba_A Smooth muscle cell asso 98.9 2.9E-08 9.9E-13 82.4 13.1 100 31-130 23-125 (148)
173 1na0_A Designed protein CTPR3; 98.9 3.3E-08 1.1E-12 78.9 13.0 82 3-84 44-125 (125)
174 3sf4_A G-protein-signaling mod 98.9 1.1E-08 3.6E-13 99.5 11.9 128 3-130 188-333 (406)
175 2r5s_A Uncharacterized protein 98.9 2.4E-08 8.2E-13 87.0 12.9 80 19-98 91-172 (176)
176 1dce_A Protein (RAB geranylger 98.9 2.3E-08 8E-13 104.2 14.8 115 3-117 64-191 (567)
177 3dra_A Protein farnesyltransfe 98.9 7.2E-08 2.5E-12 92.7 17.0 115 3-117 68-193 (306)
178 2ifu_A Gamma-SNAP; membrane fu 98.9 9.4E-09 3.2E-13 98.1 10.7 101 2-103 76-188 (307)
179 4a1s_A PINS, partner of inscut 98.9 2.1E-09 7.1E-14 105.5 6.2 127 3-129 224-368 (411)
180 3rjv_A Putative SEL1 repeat pr 98.8 3.3E-08 1.1E-12 89.2 12.6 125 2-131 18-156 (212)
181 2c2l_A CHIP, carboxy terminus 98.8 4.3E-08 1.5E-12 92.5 13.8 97 33-129 1-97 (281)
182 1zu2_A Mitochondrial import re 98.8 1.3E-08 4.5E-13 87.9 9.2 69 2-70 36-125 (158)
183 3ro2_A PINS homolog, G-protein 98.8 1.7E-08 5.7E-13 94.7 10.3 127 3-129 184-328 (338)
184 3q15_A PSP28, response regulat 98.8 3.6E-08 1.2E-12 96.5 13.0 101 2-102 182-293 (378)
185 3bee_A Putative YFRE protein; 98.8 6E-08 2E-12 76.3 11.3 74 32-105 2-78 (93)
186 4f3v_A ESX-1 secretion system 98.8 3E-08 1E-12 93.9 11.3 105 5-110 138-247 (282)
187 3n71_A Histone lysine methyltr 98.8 7.9E-08 2.7E-12 98.3 15.3 112 3-114 310-442 (490)
188 3qou_A Protein YBBN; thioredox 98.8 3.1E-08 1.1E-12 93.8 11.5 88 11-98 194-283 (287)
189 1elr_A TPR2A-domain of HOP; HO 98.8 4.4E-08 1.5E-12 79.0 10.8 95 35-129 3-104 (131)
190 2kat_A Uncharacterized protein 98.7 6.9E-08 2.4E-12 77.6 10.6 83 2-84 19-103 (115)
191 1dce_A Protein (RAB geranylger 98.7 1.7E-07 5.9E-12 97.6 16.2 111 8-118 34-157 (567)
192 3dss_A Geranylgeranyl transfer 98.7 2.5E-07 8.5E-12 89.7 16.0 107 4-110 110-233 (331)
193 3q7a_A Farnesyltransferase alp 98.7 3.7E-07 1.3E-11 89.0 17.2 105 15-119 67-174 (349)
194 3dss_A Geranylgeranyl transfer 98.7 4E-07 1.4E-11 88.3 17.1 114 4-117 66-192 (331)
195 3rjv_A Putative SEL1 repeat pr 98.7 5.8E-08 2E-12 87.6 10.3 109 2-114 50-172 (212)
196 3qww_A SET and MYND domain-con 98.7 8.6E-08 3E-12 96.5 12.1 110 4-113 300-430 (433)
197 3gw4_A Uncharacterized protein 98.7 7E-08 2.4E-12 84.6 9.9 100 2-101 66-178 (203)
198 2v5f_A Prolyl 4-hydroxylase su 98.7 2.3E-07 7.9E-12 74.1 11.8 76 2-77 5-87 (104)
199 3q7a_A Farnesyltransferase alp 98.7 2E-07 6.9E-12 90.9 13.4 114 3-116 89-213 (349)
200 2ooe_A Cleavage stimulation fa 98.6 3.8E-07 1.3E-11 93.5 15.1 124 3-126 322-447 (530)
201 2v5f_A Prolyl 4-hydroxylase su 98.6 6.2E-07 2.1E-11 71.6 12.5 80 35-114 4-90 (104)
202 4f3v_A ESX-1 secretion system 98.6 1.2E-07 4E-12 89.8 9.3 124 5-129 105-233 (282)
203 3qwp_A SET and MYND domain-con 98.6 3.6E-07 1.2E-11 91.9 13.5 112 3-114 288-420 (429)
204 3ly7_A Transcriptional activat 98.6 1.3E-06 4.5E-11 85.3 16.2 102 2-104 196-344 (372)
205 1nzn_A CGI-135 protein, fissio 98.6 6E-07 2.1E-11 74.2 11.3 103 13-115 12-119 (126)
206 1klx_A Cysteine rich protein B 98.5 1.2E-06 4.1E-11 73.5 12.8 89 8-100 31-127 (138)
207 1hz4_A MALT regulatory protein 98.5 1.1E-06 3.8E-11 85.1 14.3 97 5-101 56-166 (373)
208 2ooe_A Cleavage stimulation fa 98.5 1.4E-06 4.8E-11 89.2 14.9 106 3-108 273-394 (530)
209 1hz4_A MALT regulatory protein 98.5 1.6E-06 5.6E-11 83.9 13.7 128 3-130 15-161 (373)
210 2xm6_A Protein corresponding t 98.4 2.3E-06 8E-11 86.7 14.3 104 5-114 294-409 (490)
211 2xm6_A Protein corresponding t 98.4 1E-05 3.4E-10 81.9 18.3 108 2-115 39-158 (490)
212 1klx_A Cysteine rich protein B 98.3 6.7E-06 2.3E-10 68.9 12.5 94 15-116 8-105 (138)
213 3bee_A Putative YFRE protein; 98.3 3.2E-06 1.1E-10 66.3 9.1 68 2-69 6-76 (93)
214 3n71_A Histone lysine methyltr 98.3 1.5E-06 5.1E-11 88.8 8.2 103 2-104 351-469 (490)
215 3e4b_A ALGK; tetratricopeptide 98.2 7.4E-06 2.5E-10 82.6 12.9 105 5-114 179-293 (452)
216 1pc2_A Mitochondria fission pr 98.2 5.6E-06 1.9E-10 70.7 9.2 78 2-79 32-114 (152)
217 3u64_A Protein TP_0956; tetrat 98.2 7.1E-06 2.4E-10 77.3 10.0 85 18-102 179-272 (301)
218 3e4b_A ALGK; tetratricopeptide 98.1 1E-05 3.5E-10 81.5 11.4 100 6-114 217-328 (452)
219 1y8m_A FIS1; mitochondria, unk 98.1 9.1E-05 3.1E-09 62.1 14.0 83 33-115 36-122 (144)
220 3o48_A Mitochondria fission 1 98.1 3.9E-05 1.3E-09 63.6 11.4 85 35-119 39-127 (134)
221 3ffl_A Anaphase-promoting comp 98.0 3.1E-05 1.1E-09 66.7 9.6 109 5-114 23-165 (167)
222 3mv2_B Coatomer subunit epsilo 98.0 9.8E-05 3.3E-09 70.6 14.0 98 5-102 103-210 (310)
223 4b4t_Q 26S proteasome regulato 98.0 6.4E-05 2.2E-09 73.8 12.8 96 4-99 6-124 (434)
224 1xi4_A Clathrin heavy chain; a 97.9 4.5E-05 1.6E-09 85.4 12.5 104 3-114 1196-1324(1630)
225 3mv2_B Coatomer subunit epsilo 97.9 4E-05 1.4E-09 73.4 10.5 99 9-112 183-295 (310)
226 4b4t_Q 26S proteasome regulato 97.9 5.1E-05 1.7E-09 74.6 11.3 96 4-99 57-204 (434)
227 1b89_A Protein (clathrin heavy 97.9 3E-05 1E-09 77.7 8.5 101 4-114 124-251 (449)
228 3gla_A Low molecular weight he 97.8 0.00013 4.4E-09 57.7 9.3 78 215-292 6-98 (100)
229 1xi4_A Clathrin heavy chain; a 97.7 0.00022 7.4E-09 80.0 12.1 65 33-102 1102-1166(1630)
230 4fei_A Heat shock protein-rela 97.6 0.00032 1.1E-08 55.7 9.8 79 215-293 8-96 (102)
231 2k8q_A Protein SHQ1; beta-sand 97.6 5.2E-05 1.8E-09 62.7 4.9 81 215-300 5-91 (134)
232 3aab_A Putative uncharacterize 97.5 0.00047 1.6E-08 56.7 8.9 79 215-293 26-117 (123)
233 1nzn_A CGI-135 protein, fissio 97.5 0.00043 1.5E-08 57.0 8.3 77 3-79 36-117 (126)
234 3eud_A Protein SHQ1; CS domain 97.4 0.00063 2.1E-08 54.4 8.6 82 214-300 18-105 (115)
235 3qwp_A SET and MYND domain-con 97.4 0.00021 7.1E-09 71.7 7.2 81 2-82 329-425 (429)
236 3qww_A SET and MYND domain-con 97.3 0.00031 1.1E-08 70.5 7.6 70 2-71 340-422 (433)
237 2ff4_A Probable regulatory pro 97.3 0.0033 1.1E-07 62.0 14.5 96 3-98 116-233 (388)
238 3ly7_A Transcriptional activat 97.3 0.0012 4.1E-08 64.4 10.7 66 5-71 280-345 (372)
239 3o48_A Mitochondria fission 1 97.3 0.0021 7.3E-08 53.1 10.4 77 3-79 41-121 (134)
240 2wj5_A Heat shock protein beta 97.3 0.0013 4.5E-08 52.0 8.8 77 216-292 4-89 (101)
241 1y8m_A FIS1; mitochondria, unk 97.2 0.0032 1.1E-07 52.7 11.2 77 3-79 40-120 (144)
242 1gme_A Heat shock protein 16.9 97.2 0.0013 4.5E-08 56.1 8.9 80 214-293 44-139 (151)
243 3u64_A Protein TP_0956; tetrat 97.2 0.0017 5.8E-08 61.2 9.9 83 32-114 148-249 (301)
244 4eld_A MJ16.5-P1, small heat s 97.1 0.0022 7.7E-08 55.2 9.1 78 216-293 59-152 (161)
245 1b89_A Protein (clathrin heavy 97.0 0.00059 2E-08 68.3 5.2 84 5-96 64-174 (449)
246 4e6h_A MRNA 3'-END-processing 97.0 0.0087 3E-07 63.3 14.2 114 6-119 382-519 (679)
247 4e6h_A MRNA 3'-END-processing 96.9 0.0085 2.9E-07 63.4 13.5 131 5-135 437-572 (679)
248 3l1e_A Alpha-crystallin A chai 96.8 0.0039 1.3E-07 49.7 7.9 77 217-293 6-91 (106)
249 3ffl_A Anaphase-promoting comp 96.8 0.0049 1.7E-07 53.0 8.5 78 2-80 63-165 (167)
250 3q9p_A Heat shock protein beta 96.7 0.012 4.1E-07 44.8 9.4 73 219-291 3-84 (85)
251 4h7y_A Dual specificity protei 96.6 0.039 1.3E-06 46.6 12.8 110 4-114 15-139 (161)
252 2y1y_A Alpha-crystallin B chai 96.4 0.0066 2.3E-07 46.8 6.6 73 220-292 3-84 (90)
253 4gns_B Protein CSD3, chitin bi 96.4 0.0075 2.6E-07 64.3 8.7 78 19-96 302-397 (754)
254 2klr_A Alpha-crystallin B chai 96.1 0.011 3.8E-07 51.5 7.0 78 216-293 66-152 (175)
255 2uy1_A Cleavage stimulation fa 95.7 0.26 8.8E-06 49.9 16.0 102 5-108 216-358 (493)
256 3kae_A CDC27, possible protein 95.6 0.21 7.1E-06 43.1 12.4 95 8-107 39-151 (242)
257 2bol_A TSP36, small heat shock 95.6 0.045 1.5E-06 52.1 9.4 79 215-293 100-190 (314)
258 4gns_B Protein CSD3, chitin bi 95.0 0.065 2.2E-06 57.1 9.1 55 4-58 339-393 (754)
259 3txn_A 26S proteasome regulato 94.9 0.26 8.8E-06 48.5 12.4 92 7-98 104-209 (394)
260 1zbp_A Hypothetical protein VP 94.9 0.34 1.2E-05 44.8 12.5 62 9-70 4-65 (273)
261 2uy1_A Cleavage stimulation fa 94.7 0.6 2.1E-05 47.1 15.3 108 6-118 290-398 (493)
262 4g26_A Pentatricopeptide repea 94.1 1 3.5E-05 45.6 15.4 99 7-105 110-212 (501)
263 4b4t_R RPN7, 26S proteasome re 93.9 0.11 3.7E-06 51.7 7.4 97 5-101 134-239 (429)
264 1ya0_A SMG-7 transcript varian 93.8 0.27 9.2E-06 49.8 10.3 77 38-114 154-230 (497)
265 1ya0_A SMG-7 transcript varian 93.6 0.28 9.4E-06 49.8 10.0 79 4-82 154-232 (497)
266 1zbp_A Hypothetical protein VP 93.3 0.47 1.6E-05 43.9 9.9 69 44-112 5-73 (273)
267 4g26_A Pentatricopeptide repea 91.9 4 0.00014 41.1 15.9 93 16-108 84-180 (501)
268 2ff4_A Probable regulatory pro 91.5 0.73 2.5E-05 45.0 9.6 60 5-64 174-233 (388)
269 4b4t_P 26S proteasome regulato 91.3 3.2 0.00011 41.2 14.3 94 6-99 141-247 (445)
270 4h7y_A Dual specificity protei 90.9 1.2 4E-05 37.6 8.7 73 12-85 70-142 (161)
271 3mkq_A Coatomer beta'-subunit; 90.8 1.9 6.6E-05 45.2 12.8 80 9-93 659-746 (814)
272 3mkq_B Coatomer subunit alpha; 90.4 1.3 4.4E-05 38.3 9.0 55 4-63 7-61 (177)
273 3kae_A CDC27, possible protein 90.0 8.7 0.0003 33.1 14.4 87 3-97 3-89 (242)
274 4fhn_B Nucleoporin NUP120; pro 89.6 1.7 5.8E-05 48.6 11.5 91 6-96 846-964 (1139)
275 2bol_A TSP36, small heat shock 84.8 2.7 9.3E-05 39.8 8.2 71 221-291 231-313 (314)
276 2w2u_A Hypothetical P60 katani 84.2 4.3 0.00015 30.3 7.5 30 2-31 19-48 (83)
277 2v6y_A AAA family ATPase, P60 83.9 4.6 0.00016 30.1 7.6 30 2-31 11-40 (83)
278 3mkq_A Coatomer beta'-subunit; 83.9 11 0.00038 39.3 13.5 79 4-95 683-761 (814)
279 3spa_A Mtrpol, DNA-directed RN 82.9 17 0.00059 40.0 14.3 96 5-100 130-231 (1134)
280 3txn_A 26S proteasome regulato 81.1 19 0.00065 35.0 12.9 79 40-118 103-190 (394)
281 4b4t_S RPN3, 26S proteasome re 79.3 3 0.0001 42.2 6.5 69 36-104 231-304 (523)
282 1wy6_A Hypothetical protein ST 78.8 8.5 0.00029 31.9 7.8 33 67-99 122-154 (172)
283 4a5x_A MITD1, MIT domain-conta 77.0 3.6 0.00012 31.0 4.9 30 2-31 16-45 (86)
284 3ax2_A Mitochondrial import re 76.3 7.3 0.00025 28.3 6.2 35 5-39 20-54 (73)
285 3mkq_B Coatomer subunit alpha; 75.7 6.3 0.00021 34.0 6.7 56 34-97 6-61 (177)
286 3mv2_A Coatomer subunit alpha; 75.0 28 0.00097 32.8 11.5 103 5-107 117-244 (325)
287 3mkr_B Coatomer subunit alpha; 74.0 46 0.0016 31.3 12.6 100 5-104 105-232 (320)
288 2ijq_A Hypothetical protein; s 73.7 18 0.0006 30.6 8.8 57 42-98 38-103 (161)
289 2cfu_A SDSA1; SDS-hydrolase, l 73.5 6.1 0.00021 41.3 7.3 52 36-87 449-500 (658)
290 2v6x_A Vacuolar protein sortin 73.5 4.9 0.00017 30.0 4.9 28 3-30 14-41 (85)
291 1wfd_A Hypothetical protein 15 72.8 5.1 0.00017 30.6 4.9 27 4-30 17-43 (93)
292 2cpt_A SKD1 protein, vacuolar 72.2 4.7 0.00016 32.2 4.7 33 18-65 15-47 (117)
293 4gq2_M Nucleoporin NUP120; bet 71.5 16 0.00055 39.9 10.3 96 8-107 816-935 (950)
294 4b4t_R RPN7, 26S proteasome re 70.5 11 0.00038 37.0 8.1 80 36-115 131-215 (429)
295 4fhn_B Nucleoporin NUP120; pro 68.7 19 0.00067 40.0 10.4 94 9-106 819-936 (1139)
296 3t5v_B Nuclear mRNA export pro 67.5 13 0.00046 36.8 7.9 86 18-103 142-254 (455)
297 1qsa_A Protein (soluble lytic 64.6 48 0.0016 34.2 11.7 123 6-129 218-344 (618)
298 1om2_A Protein (mitochondrial 62.0 11 0.00038 28.9 4.7 32 6-37 24-55 (95)
299 4b4t_S RPN3, 26S proteasome re 59.2 1.2E+02 0.004 30.6 12.9 61 8-68 237-302 (523)
300 4gq2_M Nucleoporin NUP120; bet 59.0 27 0.00092 38.1 9.0 79 6-84 844-950 (950)
301 2vkj_A TM1634; membrane protei 59.0 20 0.00069 27.0 5.4 47 35-81 52-101 (106)
302 2rpa_A Katanin P60 ATPase-cont 56.8 10 0.00036 27.9 3.6 28 4-31 14-41 (78)
303 2vkj_A TM1634; membrane protei 55.5 44 0.0015 25.2 6.8 48 70-118 53-104 (106)
304 2ijq_A Hypothetical protein; s 55.4 48 0.0016 27.9 8.0 26 74-99 36-61 (161)
305 3ax2_A Mitochondrial import re 55.3 37 0.0013 24.6 6.3 38 74-111 21-58 (73)
306 1qsa_A Protein (soluble lytic 55.2 25 0.00086 36.4 7.6 83 15-98 265-347 (618)
307 2cwy_A Hypothetical protein TT 53.9 38 0.0013 25.7 6.6 26 7-32 6-31 (94)
308 4b4t_P 26S proteasome regulato 52.5 93 0.0032 30.4 11.1 63 3-65 178-247 (445)
309 2crb_A Nuclear receptor bindin 52.0 23 0.00077 26.9 4.8 27 71-97 16-42 (97)
310 2crb_A Nuclear receptor bindin 50.9 25 0.00085 26.7 4.9 25 39-63 18-42 (97)
311 3t5x_A PCI domain-containing p 49.8 35 0.0012 29.7 6.7 34 3-36 15-48 (203)
312 1wy6_A Hypothetical protein ST 46.4 1.2E+02 0.004 25.2 8.6 117 8-129 13-150 (172)
313 2cfu_A SDSA1; SDS-hydrolase, l 46.1 51 0.0018 34.2 8.3 59 70-128 449-507 (658)
314 3re2_A Predicted protein; meni 45.1 59 0.002 31.2 7.6 44 55-98 276-324 (472)
315 2yhe_A SEC-alkyl sulfatase; hy 50.7 4.6 0.00016 42.3 0.0 53 37-89 462-514 (668)
316 3t5x_A PCI domain-containing p 44.5 47 0.0016 28.8 6.7 51 36-86 14-69 (203)
317 4gq4_A Menin; tumor suppressor 42.7 1.5E+02 0.0051 29.0 10.1 77 36-112 262-351 (489)
318 2w2u_A Hypothetical P60 katani 42.6 38 0.0013 25.0 4.9 12 53-64 17-28 (83)
319 2o8p_A 14-3-3 domain containin 41.5 1.9E+02 0.0064 25.7 10.0 54 12-65 135-197 (227)
320 2v6y_A AAA family ATPase, P60 41.2 41 0.0014 24.8 4.9 16 89-104 37-52 (83)
321 2wpv_A GET4, UPF0363 protein Y 41.0 2.2E+02 0.0077 26.4 11.7 26 69-94 133-158 (312)
322 2p58_C Putative type III secre 40.6 1.1E+02 0.0039 23.7 7.2 80 8-93 13-92 (116)
323 3esl_A Checkpoint serine/threo 39.7 1.7E+02 0.0059 25.4 9.3 78 23-101 58-146 (202)
324 2rpa_A Katanin P60 ATPase-cont 37.7 32 0.0011 25.2 3.6 27 72-98 14-40 (78)
325 3myv_A SUSD superfamily protei 37.6 74 0.0025 31.1 7.6 31 69-99 189-219 (454)
326 2uwj_G Type III export protein 36.7 1.1E+02 0.0038 23.7 6.6 81 7-93 11-91 (115)
327 4a5x_A MITD1, MIT domain-conta 36.5 54 0.0018 24.3 4.9 11 49-59 29-39 (86)
328 3re2_A Predicted protein; meni 34.8 65 0.0022 30.9 6.1 45 21-65 276-325 (472)
329 3u84_A Menin; MLL, JUND, ledgf 34.5 1E+02 0.0035 30.1 7.5 44 55-98 298-346 (550)
330 3kez_A Putative sugar binding 34.0 87 0.003 30.7 7.5 30 70-99 196-225 (461)
331 3may_A RV0203, possible export 34.0 28 0.00097 26.8 2.9 31 355-385 31-61 (101)
332 1om2_A Protein (mitochondrial 33.5 60 0.002 24.7 4.7 37 74-110 24-60 (95)
333 1wfd_A Hypothetical protein 15 33.0 64 0.0022 24.3 4.9 16 89-104 41-56 (93)
334 3lew_A SUSD-like carbohydrate 32.5 97 0.0033 30.7 7.6 30 70-99 203-232 (495)
335 2cpt_A SKD1 protein, vacuolar 32.2 60 0.0021 25.6 4.8 42 52-108 15-63 (117)
336 3u84_A Menin; MLL, JUND, ledgf 31.9 74 0.0025 31.1 6.1 46 20-65 297-347 (550)
337 2v6x_A Vacuolar protein sortin 31.5 71 0.0024 23.4 4.9 10 54-63 12-21 (85)
338 2p58_C Putative type III secre 31.0 1.9E+02 0.0064 22.5 8.0 84 40-129 11-94 (116)
339 3mcx_A SUSD superfamily protei 30.9 93 0.0032 30.6 7.1 32 69-100 201-232 (477)
340 4aez_C MAD3, mitotic spindle c 30.4 2.5E+02 0.0085 24.8 8.9 50 53-102 131-182 (223)
341 2uwj_G Type III export protein 30.2 1.6E+02 0.0055 22.8 6.5 81 43-129 13-93 (115)
342 3lpz_A GET4 (YOR164C homolog); 29.9 3.5E+02 0.012 25.4 11.9 27 68-94 134-160 (336)
343 3spa_A Mtrpol, DNA-directed RN 28.5 1.9E+02 0.0064 32.0 9.2 73 37-110 128-207 (1134)
344 4gq4_A Menin; tumor suppressor 28.0 95 0.0032 30.4 6.1 46 20-65 282-332 (489)
345 2cwy_A Hypothetical protein TT 26.9 1.9E+02 0.0065 21.6 6.6 56 41-98 6-67 (94)
346 1sz9_A PCF11 protein; RNA poly 26.6 42 0.0015 27.5 3.1 22 356-377 86-107 (144)
347 2pmr_A Uncharacterized protein 26.4 68 0.0023 24.0 3.8 39 18-64 29-67 (87)
348 2oo2_A Hypothetical protein AF 26.4 69 0.0024 23.9 3.8 25 38-62 37-61 (86)
349 2rkl_A Vacuolar protein sortin 25.8 1.1E+02 0.0037 20.6 4.3 30 2-31 20-49 (53)
350 3myv_A SUSD superfamily protei 24.9 1.3E+02 0.0045 29.3 6.9 14 36-49 111-124 (454)
351 3t5v_B Nuclear mRNA export pro 24.5 1.2E+02 0.0041 29.9 6.4 61 9-69 183-254 (455)
352 4b4t_O 26S proteasome regulato 24.4 4.6E+02 0.016 24.9 11.3 87 12-98 86-197 (393)
353 3ph0_C ASCG; type III secretio 23.7 1.8E+02 0.0061 19.9 5.4 40 50-90 20-60 (61)
354 4a1g_A Mitotic checkpoint seri 23.6 2E+02 0.0069 23.7 6.7 50 53-102 82-133 (152)
355 3lew_A SUSD-like carbohydrate 23.6 1.7E+02 0.006 28.8 7.6 14 36-49 119-132 (495)
356 3qnk_A Putative lipoprotein; a 23.2 1.7E+02 0.0057 29.1 7.4 30 70-99 182-211 (517)
357 2npm_A 14-3-3 domain containin 22.7 1.7E+02 0.0059 26.5 6.6 15 49-63 211-225 (260)
358 2dl1_A Spartin; SPG20, MIT, st 22.5 1.1E+02 0.0039 24.0 4.6 47 14-68 15-61 (116)
359 3kez_A Putative sugar binding 22.1 1.5E+02 0.0051 29.0 6.7 14 36-49 117-130 (461)
360 2ymb_A MITD1, MIT domain-conta 22.0 19 0.00065 32.8 0.0 16 17-32 19-34 (257)
361 2wpv_A GET4, UPF0363 protein Y 21.9 1.3E+02 0.0043 28.1 5.7 64 35-98 133-216 (312)
362 2br9_A 14-3-3E, 14-3-3 protein 21.5 1.2E+02 0.0042 27.0 5.3 13 83-95 186-198 (234)
363 2xze_A STAM-binding protein; h 21.4 1.1E+02 0.0039 25.0 4.7 25 3-27 41-65 (146)
364 3isy_A Bsupi, intracellular pr 21.4 1.1E+02 0.0037 24.3 4.4 51 219-269 14-67 (120)
365 4a1g_A Mitotic checkpoint seri 20.7 3E+02 0.01 22.6 7.2 49 20-68 83-133 (152)
366 3clj_A Protein NRD1; CTD-inter 20.3 57 0.0019 27.3 2.6 22 356-377 101-122 (157)
367 3i4g_A SUSD-like carbohydrate 20.3 2.5E+02 0.0085 28.0 8.0 63 36-98 123-226 (528)
368 2wvi_A Mitotic checkpoint seri 20.0 3E+02 0.01 23.0 7.1 49 1-49 95-143 (164)
369 2yhe_A SEC-alkyl sulfatase; hy 24.8 23 0.00079 37.0 0.0 59 70-128 461-519 (668)
No 1
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=99.88 E-value=5.7e-24 Score=183.33 Aligned_cols=105 Identities=25% Similarity=0.356 Sum_probs=91.9
Q ss_pred CccccccCCCeEEEEEEeCCCCCCceEEEEe-eeEEEEEEEcCCCCeeeecccccccccCCcceEEEeCcEEEEEEeeCC
Q 015029 214 YRHEFYQKPEEVVVTVFAKGIPAKNVTVDFG-EQILSVSIDVPGEEAYHFQPRLFGKIIPAKCRYEVLSTKVEIRLAKAE 292 (414)
Q Consensus 214 ~r~dW~Qt~~~V~i~i~~k~~~~~~v~v~~~-~~~l~v~~~~~~~~~y~~~~~L~~~I~p~~s~~~v~~~kiei~L~K~~ 292 (414)
++|+||||.+.|+|+|+++++ .+++|+|+ +++|+|++...+|..|.+.|+||++|+|+ |+|+|++++|+|+|+|++
T Consensus 5 P~~~W~Qt~~~V~ltI~l~~~--~~v~V~~~~~~~l~~~~~~~~~~~y~~~l~L~~~Idpe-S~~~v~~~kIei~L~K~e 81 (150)
T 2kmw_A 5 PEVLWAQRSDKVYLTVALPDA--KDISVKCEPQGLFSFSALGAQGERFEFSLELYGKIMTE-YRKNVGLRNIIFSIQKEE 81 (150)
T ss_dssp CCEEEEECSSEEEEEECCSSE--EEEEECCCTTEEEEEEEETTTTEEEEEEEEBSSCEEEE-EEEEEESSSEEEEEEECC
T ss_pred CcEEEEeCCCEEEEEEEeCCC--CceEEEEecCCEEEEEEEcCCCceEEEEeEhhhccccc-ceEEecCCEEEEEEEECC
Confidence 479999999999999999987 58999999 79999998766777899999999999999 999999999999999999
Q ss_pred CCCCCccccCCCccCCcccCCCCCCCCCCCCCCCCCCCCCCchhHHHHH
Q 015029 293 PIQWSSLEFSKGAVVPQRVNPPSVSGSPRPTYPSSKPTRVDWDKLEAQV 341 (414)
Q Consensus 293 ~~~W~~L~~~~~~~~~~~~~~~~~~~~~~~~yp~s~~~~~dWdk~~~e~ 341 (414)
+.+|++|++... +.++|. ++|||||.+|.
T Consensus 82 ~~~W~rL~k~~~---------------K~~~~l-----k~Dwdkw~ded 110 (150)
T 2kmw_A 82 RSWWTRLLKSEE---------------KPAPYI-----KVDWNKWCDED 110 (150)
T ss_dssp SSCCSCSBSCCS---------------SCCTTE-----EECSSSSCCSS
T ss_pred CCcCcccccCCc---------------ccCccc-----cccchhcCCch
Confidence 999999997631 114454 77999998653
No 2
>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2
Probab=99.87 E-value=7.1e-23 Score=171.81 Aligned_cols=103 Identities=18% Similarity=0.264 Sum_probs=90.4
Q ss_pred ccccccCCCeEEEEEEeCCCCCCceEEEEeeeEEEEEEEc-CCCCeeeecccccccccCCcceEEEeCcEEEEEEeeCCC
Q 015029 215 RHEFYQKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDV-PGEEAYHFQPRLFGKIIPAKCRYEVLSTKVEIRLAKAEP 293 (414)
Q Consensus 215 r~dW~Qt~~~V~i~i~~k~~~~~~v~v~~~~~~l~v~~~~-~~~~~y~~~~~L~~~I~p~~s~~~v~~~kiei~L~K~~~ 293 (414)
+|+||||.+.|+|+|+++++ +++.|+|++++|+|.+.+ .+|..|.+.++||++|+|++|+|++.+++|+|+|+|+++
T Consensus 5 ~~~W~Qt~~~V~ltI~~~~~--~~~~V~~~~~~l~~~~~~~~~~~~y~~~l~L~~~I~~e~S~~~v~~~kiei~L~K~~~ 82 (125)
T 1ejf_A 5 SAKWYDRRDYVFIEFCVEDS--KDVNVNFEKSKLTFSCLGGSDNFKHLNEIDLFHCIDPNDSKHKRTDRSILCCLRKGES 82 (125)
T ss_dssp CEEEEECSSEEEEEECCTTE--EEEEEEEETTEEEEEEEETTTTEEEEEEEEBSSCEEEEEEEEEECSSCEEEEEEESST
T ss_pred ceeEEeCCCEEEEEEEecCC--CceEEEEECCEEEEEEEeCCCCceEEEEEEccceeccccCEEEECCCEEEEEEEECCC
Confidence 79999999999999999985 799999999999999875 567789999999999999999999999999999999986
Q ss_pred -CCCCccccCCCccCCcccCCCCCCCCCCCCCCCCCCCCCCchhHHHH
Q 015029 294 -IQWSSLEFSKGAVVPQRVNPPSVSGSPRPTYPSSKPTRVDWDKLEAQ 340 (414)
Q Consensus 294 -~~W~~L~~~~~~~~~~~~~~~~~~~~~~~~yp~s~~~~~dWdk~~~e 340 (414)
.+|++|++.+ .+++|. ++|||||.++
T Consensus 83 ~~~W~rL~~~~----------------~K~~~l-----k~D~dkw~de 109 (125)
T 1ejf_A 83 GQSWPRLTKER----------------AKLNWL-----SVDFNNWKDW 109 (125)
T ss_dssp TCCCSSSBSSC----------------CCCTTE-----EECTTTCCCC
T ss_pred CCCCCceecCC----------------Cccccc-----cCChHHhCCc
Confidence 5999999763 223443 7799999864
No 3
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=99.86 E-value=8e-22 Score=156.57 Aligned_cols=91 Identities=77% Similarity=1.247 Sum_probs=85.4
Q ss_pred CCCccccccCCCeEEEEEEeCCCCCCceEEEEeeeEEEEEEEcCCCCeeeecccccccccCCcceEEEeCcEEEEEEeeC
Q 015029 212 PKYRHEFYQKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVPGEEAYHFQPRLFGKIIPAKCRYEVLSTKVEIRLAKA 291 (414)
Q Consensus 212 ~~~r~dW~Qt~~~V~i~i~~k~~~~~~v~v~~~~~~l~v~~~~~~~~~y~~~~~L~~~I~p~~s~~~v~~~kiei~L~K~ 291 (414)
+++||+||||.+.|+|+|+++|+.++++.|+|++++|+|.+...++..|.++++||++|+|++|++++.+++|+|+|+|+
T Consensus 1 ~~~~~~W~Qt~~~V~v~i~~~~v~~~~v~v~~~~~~l~v~~~~~~~~~y~~~~~L~~~I~~~~s~~~~~~~~l~i~L~K~ 80 (92)
T 2xcm_C 1 AKYRHEYYQKPEEVVVTVFAKGIPKQNVNIDFGEQILSVVIEVPGEDAYYLQPRLFGKIIPDKCKYEVLSTKIEICLAKA 80 (92)
T ss_dssp CCSEEEEEEETTEEEEEEECCSCCGGGEEEEECSSBEEEEECCTTSCCEEECCBBSSCBCGGGCEEEECSSCEEEEEEBS
T ss_pred CCccccEEeCCCEEEEEEEECCCChHHeEEEEECCEEEEEEEcCCCcEEEEeeEcCCccCchhEEEEEECCEEEEEEEcC
Confidence 36899999999999999999999999999999999999998876777899999999999999999999999999999999
Q ss_pred CCCCCCccccC
Q 015029 292 EPIQWSSLEFS 302 (414)
Q Consensus 292 ~~~~W~~L~~~ 302 (414)
++++|++|+++
T Consensus 81 ~~~~W~~L~~~ 91 (92)
T 2xcm_C 81 DIITWASLEHG 91 (92)
T ss_dssp SSCCCSCSBTT
T ss_pred CCCcchhcccC
Confidence 98999999864
No 4
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.84 E-value=6.6e-20 Score=153.59 Aligned_cols=113 Identities=26% Similarity=0.441 Sum_probs=109.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~ 81 (414)
|+.++++|+.++..|+|++|+..|+++|+++|.++.+|.++|.||+++|++++|+.+|++|+.++|.++.+|+++|.+|+
T Consensus 13 a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~ 92 (126)
T 4gco_A 13 AQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYIRKAACLV 92 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHHHHHHHHHH
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 015029 82 KLEEYETAKVALEKGASLAPGDSRFTNLIKEFV 114 (414)
Q Consensus 82 ~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~ 114 (414)
.+|+|++|+.+|+++++++|++..+...++.|.
T Consensus 93 ~~~~~~~A~~~~~~al~l~P~~~~a~~~l~~~l 125 (126)
T 4gco_A 93 AMREWSKAQRAYEDALQVDPSNEEAREGVRNCL 125 (126)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHC
T ss_pred HCCCHHHHHHHHHHHHHHCcCCHHHHHHHHHhc
Confidence 999999999999999999999999998888764
No 5
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=99.84 E-value=1.8e-21 Score=164.23 Aligned_cols=91 Identities=26% Similarity=0.485 Sum_probs=85.0
Q ss_pred CCccccccC-CCeEEEEEEeCCCCCCceEEEEeeeEEEEEEEcCCCC------------eeeecccccccccCCcceEEE
Q 015029 213 KYRHEFYQK-PEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVPGEE------------AYHFQPRLFGKIIPAKCRYEV 279 (414)
Q Consensus 213 ~~r~dW~Qt-~~~V~i~i~~k~~~~~~v~v~~~~~~l~v~~~~~~~~------------~y~~~~~L~~~I~p~~s~~~v 279 (414)
.+||+|||| .+.|+|+||++++.++++.|+|++++|+|.+...++. .|.++++||++|+|++|+|+|
T Consensus 19 ~~r~~W~Qt~~~~V~vtI~~k~v~~~~v~V~f~~~~l~v~~~~~~~~~l~~~~a~g~~~~y~~~~~L~~~I~pe~S~~~v 98 (134)
T 1wh0_A 19 FVKNDSYEKGPDSVVVHVYVKEICRDTSRVLFREQDFTLIFQTRDGNFLRLHPGCGPHTTFRWQVKLRNLIEPEQCTFCF 98 (134)
T ss_dssp CCCEEEEEETTTEEEEEEECCSBCTTSCEEEECSSEEEEEECBCCHHHHHHSTTCCTTSCEEEEEEBSSCEEEEEEEEEE
T ss_pred CCCeEEEcCCCCEEEEEEEeCCCCcccCEEEEECCEEEEEEEcCCCcccccccccCcceeEEEeccccccCCchhCEEEE
Confidence 679999999 9999999999999999999999999999998776554 799999999999999999999
Q ss_pred eCcEEEEEEeeCCCCCCCccccCC
Q 015029 280 LSTKVEIRLAKAEPIQWSSLEFSK 303 (414)
Q Consensus 280 ~~~kiei~L~K~~~~~W~~L~~~~ 303 (414)
.+++|||+|+|+++.+|++|++..
T Consensus 99 ~~~kIeI~L~K~e~~~W~~L~~~~ 122 (134)
T 1wh0_A 99 TASRIDICLRKRQSQRWGGLEAPA 122 (134)
T ss_dssp CSSEEEEEEEESSSCCCSCSBCCC
T ss_pred eCCEEEEEEEECCCCccccccccC
Confidence 999999999999989999999764
No 6
>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=99.84 E-value=2.9e-22 Score=169.83 Aligned_cols=104 Identities=19% Similarity=0.290 Sum_probs=84.9
Q ss_pred CccccccCCCe-------EEEEEEeCCCCCCceEEEEeeeEEEEEEEcCC------CCeeeecccccccccCCcceEEEe
Q 015029 214 YRHEFYQKPEE-------VVVTVFAKGIPAKNVTVDFGEQILSVSIDVPG------EEAYHFQPRLFGKIIPAKCRYEVL 280 (414)
Q Consensus 214 ~r~dW~Qt~~~-------V~i~i~~k~~~~~~v~v~~~~~~l~v~~~~~~------~~~y~~~~~L~~~I~p~~s~~~v~ 280 (414)
++|+||||.+. |+|+|+++++ .++.|+|++++|+|++...+ +..|.+.|+||++|+|++|+|++.
T Consensus 7 p~~~W~Q~~~~~~~~k~~V~ltI~~~~~--~~~~V~~~~~~l~~~~~~~~~~g~~~~~~y~~~l~L~~~Idpe~S~~~v~ 84 (134)
T 2cg9_X 7 PQVAWAQRSSTTDPERNYVLITVSIADC--DAPELTIKPSYIELKAQSKPHVGDENVHHYQLHIDLYKEIIPEKTMHKVA 84 (134)
T ss_dssp ----CBCCCEEECCCSSEEEEECCCSSE--ESCCCCBCSSEEEECCEEC-------CEEBCEEEECSSCCCSSSEEEEEC
T ss_pred CCEEEEeCCCCcCCcCCEEEEEEEecCC--CceEEEEECCEEEEEEecccccCCccCceEEEEEEChhhccccccEEEEC
Confidence 47999999988 9999999987 48999999999999876543 467999999999999999999999
Q ss_pred CcE-EEEEEeeCC--CCCCCccccCCCccCCcccCCCCCCCCCCCCCCCCCCCCCCchhHHHH
Q 015029 281 STK-VEIRLAKAE--PIQWSSLEFSKGAVVPQRVNPPSVSGSPRPTYPSSKPTRVDWDKLEAQ 340 (414)
Q Consensus 281 ~~k-iei~L~K~~--~~~W~~L~~~~~~~~~~~~~~~~~~~~~~~~yp~s~~~~~dWdk~~~e 340 (414)
+++ |+|+|+|++ ..+|++|++.. .+++|. ++|||||.+|
T Consensus 85 ~~~~vei~L~K~~~~~~~W~rL~k~~----------------~K~~~l-----k~D~dkw~dE 126 (134)
T 2cg9_X 85 NGQHYFLKLYKKDLESEYWPRLTKEK----------------VKYPYI-----KTDFDKWVDA 126 (134)
T ss_dssp CC--CEEEEEECSSSSCCCSCSSSSC----------------CCCSSE-----EECTTTCCCS
T ss_pred CCEEEEEEEEECCCCCCCCCceecCC----------------CccCcc-----cCCchhcCCc
Confidence 999 999999998 47999999763 233343 7799999864
No 7
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.83 E-value=1.3e-20 Score=158.41 Aligned_cols=90 Identities=20% Similarity=0.233 Sum_probs=83.7
Q ss_pred CCccccccCCCeEEEEEEeCCC---CCCceEEEEeeeEEEEEEEcCCCCeeeeccc-ccccccCCcceEEEeCcEEEEEE
Q 015029 213 KYRHEFYQKPEEVVVTVFAKGI---PAKNVTVDFGEQILSVSIDVPGEEAYHFQPR-LFGKIIPAKCRYEVLSTKVEIRL 288 (414)
Q Consensus 213 ~~r~dW~Qt~~~V~i~i~~k~~---~~~~v~v~~~~~~l~v~~~~~~~~~y~~~~~-L~~~I~p~~s~~~v~~~kiei~L 288 (414)
-.||+||||.+.|+|+|+++++ .++++.|+|++++|+|.+...++..|.|+++ ||++|+|++|+|+|.+++|+|+|
T Consensus 20 ~~~y~W~Qt~~~V~i~I~l~~~~~~~~~~v~V~~~~~~l~v~~~~~~~~~y~~~~~~L~~~I~~e~S~~~v~~~kVei~L 99 (127)
T 1x5m_A 20 ISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNLNGKSYSMIVNNLLKPISVEGSSKKVKTDTVLILC 99 (127)
T ss_dssp CCSCEEEEETTEEEEEEECTTTTTSCTTSEEEEECSSEEEEEECSCSSSCEEEEEECBSSCCCTTTCEEEEETTEEEEEE
T ss_pred ccEEEEEcCCCEEEEEEEeCCCCcCCccccEEEEEcCEEEEEEEcCCCCcEEEEhHHhcCccCcccCEEEEeCCEEEEEE
Confidence 3499999999999999999998 7899999999999999998777888999995 99999999999999999999999
Q ss_pred eeCCCC-CCCccccC
Q 015029 289 AKAEPI-QWSSLEFS 302 (414)
Q Consensus 289 ~K~~~~-~W~~L~~~ 302 (414)
+|++++ +|++|+..
T Consensus 100 ~K~~~~~~W~~L~~~ 114 (127)
T 1x5m_A 100 RKKVENTRWDYLTQV 114 (127)
T ss_dssp ECSSSSCCCSSSBHH
T ss_pred EECCCCCCCCccccc
Confidence 999875 99999865
No 8
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=99.83 E-value=8.2e-21 Score=156.86 Aligned_cols=95 Identities=35% Similarity=0.652 Sum_probs=87.0
Q ss_pred CCCCccccccCCCeEEEEEEeCCCCCCceEEEEeeeEEEEEEEcCCCCeeeecccccccccCCcceEEEeCcEEEEEEee
Q 015029 211 RPKYRHEFYQKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVPGEEAYHFQPRLFGKIIPAKCRYEVLSTKVEIRLAK 290 (414)
Q Consensus 211 ~~~~r~dW~Qt~~~V~i~i~~k~~~~~~v~v~~~~~~l~v~~~~~~~~~y~~~~~L~~~I~p~~s~~~v~~~kiei~L~K 290 (414)
.+++||+|+||.+.|+|+|+++++.++++.|+|++++|+|++...++..|.+.++||++|+|++|+|++.+++|+|+|.|
T Consensus 7 ~~~~~~~W~Qt~~~V~v~i~l~~v~~~~v~v~~~~~~l~v~~~~~~~~~y~~~~~L~~~I~~e~s~~~~~~~~l~i~L~K 86 (114)
T 1rl1_A 7 QSKIKYDWYQTESQVVITLMIKNVQKNDVNVEFSEKELSALVKLPSGEDYNLKLELLHPIIPEQSTFKVLSTKIEIKLKK 86 (114)
T ss_dssp -CCCCEEEEECSSEEEEEECCCSCCGGGEEEECSSSCEEEEEECTTSSEEEEEECBSSCCCGGGEEEEECSSSEEEEEEC
T ss_pred CCCCCccEEeCCCEEEEEEEeCCCCHHHCEEEEEcCEEEEEEEeCCCcEEEEEeeCCCcCCccccEEEEECCEEEEEEEc
Confidence 45789999999999999999999999999999999999999887777889999999999999999999999999999999
Q ss_pred CCCCCCCccccCCCc
Q 015029 291 AEPIQWSSLEFSKGA 305 (414)
Q Consensus 291 ~~~~~W~~L~~~~~~ 305 (414)
+++++|++|++.+..
T Consensus 87 ~~~~~W~~L~~~~~~ 101 (114)
T 1rl1_A 87 PEAVRWEKLEGQGDV 101 (114)
T ss_dssp SSCCCCSSSBTTC--
T ss_pred CCCCcCccccccCCc
Confidence 998999999987543
No 9
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.77 E-value=1.1e-18 Score=151.63 Aligned_cols=117 Identities=20% Similarity=0.159 Sum_probs=108.6
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-------CHH-----HHHHHHHHHHHccCHHHHHHHHHHHHHh---
Q 015029 1 MATDLEKKAKEAFIDDYFELAYDLYSQAIEISPN-------SAE-----LFADRAQASIKLQNFTEAVADANRAIEL--- 65 (414)
Q Consensus 1 ~Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~-------~~~-----~~~~ra~~~~kl~~~~~Al~~~~~Ai~l--- 65 (414)
||..++..|+.++..|+|++|+..|++||+++|+ +.. +|.++|.|+.++|+|++|+.+|++||++
T Consensus 10 ~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~ 89 (159)
T 2hr2_A 10 GAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNR 89 (159)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhc
Confidence 4778999999999999999999999999999999 544 9999999999999999999999999999
Q ss_pred ----CCCCHHHH----HHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 015029 66 ----EPSMSKAY----WRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKEFVGLL 117 (414)
Q Consensus 66 ----~p~~~~a~----~~~g~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~ 117 (414)
+|++..+| |++|.+|..+|+|++|+.+|+++++++|++..+...+..+++..
T Consensus 90 ~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~~~~~~~~~~~~~~ 149 (159)
T 2hr2_A 90 RGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGETPGKERMMEVA 149 (159)
T ss_dssp HCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCSCCTTHHHHHHHH
T ss_pred cccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHH
Confidence 99999999 99999999999999999999999999999988777777766433
No 10
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.76 E-value=1.2e-17 Score=144.73 Aligned_cols=117 Identities=20% Similarity=0.266 Sum_probs=110.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------------------CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHH
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEI------------------SPNSAELFADRAQASIKLQNFTEAVADANRAI 63 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~------------------~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai 63 (414)
+..+...|+.++..|+|++|+..|++||.+ +|.+..+|+++|.||+++|+|++|+.+|++|+
T Consensus 11 a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al 90 (162)
T 3rkv_A 11 VEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEVL 90 (162)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Confidence 567899999999999999999999999999 77778999999999999999999999999999
Q ss_pred HhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCH-HHHHHHHHHHHHHh
Q 015029 64 ELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDS-RFTNLIKEFVGLLM 118 (414)
Q Consensus 64 ~l~p~~~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p~~~-~~~~~l~~~~~~~~ 118 (414)
.++|.++.+|+++|.+|+.+|+|++|+.+|++++.++|++. .+...+..+...+.
T Consensus 91 ~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~~~~~ 146 (162)
T 3rkv_A 91 KREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAREMKIVTERRA 146 (162)
T ss_dssp HHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHH
T ss_pred hcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999 77888888885443
No 11
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.76 E-value=2.8e-17 Score=135.89 Aligned_cols=113 Identities=32% Similarity=0.458 Sum_probs=110.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~ 81 (414)
++.+...|..++..|+|++|+..|.++|.++|+++.++.++|.+|+++|+|++|+.+|++++.++|.++.+++++|.+|+
T Consensus 4 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~ 83 (126)
T 3upv_A 4 AEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQI 83 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 57889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCChHHHHHHHHHHHHhC------CCCHHHHHHHHHHH
Q 015029 82 KLEEYETAKVALEKGASLA------PGDSRFTNLIKEFV 114 (414)
Q Consensus 82 ~lg~y~~A~~~~~~a~~l~------p~~~~~~~~l~~~~ 114 (414)
.+|+|++|+.+|++++.++ |.+..+...+..+.
T Consensus 84 ~~~~~~~A~~~~~~al~~~p~~~~~p~~~~~~~~l~~~~ 122 (126)
T 3upv_A 84 AVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKAS 122 (126)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHH
T ss_pred HHhCHHHHHHHHHHHHHhCcccCCchhHHHHHHHHHHHH
Confidence 9999999999999999999 99999999998887
No 12
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=99.75 E-value=2.7e-18 Score=145.07 Aligned_cols=122 Identities=16% Similarity=0.237 Sum_probs=74.4
Q ss_pred CccccccCCCeEEEEEEe-CCCCCCceEEEEeeeEEEEEEEcCCCCeeeecccccccccCCcceEEEeCcEEEEEEeeCC
Q 015029 214 YRHEFYQKPEEVVVTVFA-KGIPAKNVTVDFGEQILSVSIDVPGEEAYHFQPRLFGKIIPAKCRYEVLSTKVEIRLAKAE 292 (414)
Q Consensus 214 ~r~dW~Qt~~~V~i~i~~-k~~~~~~v~v~~~~~~l~v~~~~~~~~~y~~~~~L~~~I~p~~s~~~v~~~kiei~L~K~~ 292 (414)
.+|.|+||.+.|+|+|++ ++++.+++.|+|++++|+|.+. |.+ .+.++||++|+|++|+|++.+++|+|+|.|+.
T Consensus 5 ~~y~W~Qt~~~V~i~I~lp~~~~~kdv~V~i~~~~l~v~~~---g~~-~~~~~L~~~I~~e~S~w~i~~~kv~i~L~K~~ 80 (131)
T 2o30_A 5 AKYTWDQELNEINIQFPVTGDADSSAIKIRMVGKKICVKNQ---GEI-VIDGELLHEVDVSSLWWVINGDVVDVNVTKKR 80 (131)
T ss_dssp CCCEEEEETTEEEEEEECC---CCSCEEEEEETTEEEEEET---TEE-EEEEEBSSCEEEEEEEEEEETTEEEEEEEESS
T ss_pred CcEEEEecCCEEEEEEECCCCCCccceEEEEECCEEEEEEC---CEe-eEccccccccccccCEEEEeCCEEEEEEEECC
Confidence 479999999999999997 6788899999999999999874 445 78889999999999999999999999999996
Q ss_pred CCCCCccccCCCccCCcccCCCCCCCCCCCCCCCCCCCCCCchhHHHHHhhhhhhhcccchHHHHHHHHHHhcCCCHHHH
Q 015029 293 PIQWSSLEFSKGAVVPQRVNPPSVSGSPRPTYPSSKPTRVDWDKLEAQVKKEEKEEKLDGDAALNKFFQEIYADADEDTR 372 (414)
Q Consensus 293 ~~~W~~L~~~~~~~~~~~~~~~~~~~~~~~~yp~s~~~~~dWdk~~~e~~~~e~~e~~~~~~~~~~~f~~iY~~~d~d~k 372 (414)
..+|++|.+.+. ++|..++..+ + . ..| .+.|+|||
T Consensus 81 ~~~W~~L~~~~~--------------------------~id~~k~~~e--------~--~-~~l--------~dld~e~~ 115 (131)
T 2o30_A 81 NEWWDSLLVGSE--------------------------SVDVQKLAEN--------K--H-ADM--------SMLDAEAR 115 (131)
T ss_dssp CCCCSCSBC-----------------------------------------------------------------------
T ss_pred CCCCccccCCCC--------------------------CCCHhHcCcc--------c--c-ccc--------ccCCHHHH
Confidence 689999997531 2344444321 0 0 113 44599999
Q ss_pred HHHHhhhhhcCC
Q 015029 373 RAMKKSFVESNG 384 (414)
Q Consensus 373 ram~KS~~eS~g 384 (414)
+++.|.+.++.-
T Consensus 116 ~~v~k~~~d~~q 127 (131)
T 2o30_A 116 EVVEKMMHNTSG 127 (131)
T ss_dssp ------------
T ss_pred HHHHHHHHHHHH
Confidence 999998887654
No 13
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.74 E-value=5.1e-17 Score=135.86 Aligned_cols=112 Identities=22% Similarity=0.291 Sum_probs=101.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC-------HHHHH
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSM-------SKAYW 74 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~-------~~a~~ 74 (414)
|..+.+.|+.++..|+|++|+.+|++||+++|+++.+|.++|.+|+++|+|++|+.+|++|+.++|.+ ..+|+
T Consensus 8 A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~ 87 (127)
T 4gcn_A 8 AIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAKAMS 87 (127)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHHHHH
Confidence 56788999999999999999999999999999999999999999999999999999999999998864 46899
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 015029 75 RKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKEFV 114 (414)
Q Consensus 75 ~~g~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~ 114 (414)
++|.++..+|+|++|+.+|++++.++|+ +.....+.+++
T Consensus 88 ~lg~~~~~~~~~~~A~~~~~kal~~~~~-~~~~~~l~~le 126 (127)
T 4gcn_A 88 RAGNAFQKQNDLSLAVQWFHRSLSEFRD-PELVKKVKELE 126 (127)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHSCC-HHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHhhCcC-HHHHHHHHHhC
Confidence 9999999999999999999999999885 55555555543
No 14
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=99.71 E-value=3.8e-17 Score=136.69 Aligned_cols=91 Identities=18% Similarity=0.196 Sum_probs=82.0
Q ss_pred CccccccCCCeEEEEEEeC-CC-CCCceEEEEeeeEEEEEEEcCCCCeeeecccccccccCCcceEEEeCcE-EEEEEee
Q 015029 214 YRHEFYQKPEEVVVTVFAK-GI-PAKNVTVDFGEQILSVSIDVPGEEAYHFQPRLFGKIIPAKCRYEVLSTK-VEIRLAK 290 (414)
Q Consensus 214 ~r~dW~Qt~~~V~i~i~~k-~~-~~~~v~v~~~~~~l~v~~~~~~~~~y~~~~~L~~~I~p~~s~~~v~~~k-iei~L~K 290 (414)
.+|.|+||.+.|+|+|.++ ++ +.+++.|+|++++|+|.+...++..|.+.++||++|+|++|+|++.+++ |+|+|+|
T Consensus 20 ~~y~W~Qt~~~V~i~I~lp~~~~~~kdv~V~i~~~~l~v~~~~~~~~~~~~~~~L~~~I~~e~S~w~i~~~k~v~i~L~K 99 (124)
T 1wgv_A 20 ENYTWSQDYTDLEVRVPVPKHVVKGKQVSVALSSSSIRVAMLEENGERVLMEGKLTHKINTESSLWSLEPGKCVLVNLSK 99 (124)
T ss_dssp SSCEEEEETTEEEEEEECCTTCCSGGGEEEEECSSEEEEEEECSSSEEEEEEEEBSSCBCTTTCEEEECTTSEEEEEECB
T ss_pred CcEEEEEcccEEEEEEEcCCCCCchhheEEEEEcCEEEEEEEccCCCceEEcccccCcCCCcCCEEEEeCCCEEEEEEEE
Confidence 4799999999999999986 66 7899999999999999987655666788999999999999999999987 9999999
Q ss_pred CCCCCCCccccCCC
Q 015029 291 AEPIQWSSLEFSKG 304 (414)
Q Consensus 291 ~~~~~W~~L~~~~~ 304 (414)
++..+|++|.+.+.
T Consensus 100 ~~~~~W~~L~~~~~ 113 (124)
T 1wgv_A 100 VGEYWWNAILEGEE 113 (124)
T ss_dssp SSSCCCSCSBTTSC
T ss_pred CCCCCCcCcccCCC
Confidence 98899999997654
No 15
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.71 E-value=2.7e-16 Score=136.18 Aligned_cols=103 Identities=13% Similarity=0.037 Sum_probs=99.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~ 81 (414)
++.++..|..++..|+|++|+..|.+++.++|+++.+|+++|.+|..+|+|++|+.+|++|+.++|+++.+|+++|.+|.
T Consensus 36 ~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~~~~~~lg~~~~ 115 (151)
T 3gyz_A 36 MDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQL 115 (151)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCCcHHHHHHHHHHH
Confidence 35688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCChHHHHHHHHHHHHhCCCCH
Q 015029 82 KLEEYETAKVALEKGASLAPGDS 104 (414)
Q Consensus 82 ~lg~y~~A~~~~~~a~~l~p~~~ 104 (414)
.+|++++|+.+|++++.+.|+.+
T Consensus 116 ~lg~~~eA~~~~~~al~l~~~~~ 138 (151)
T 3gyz_A 116 RLKAPLKAKECFELVIQHSNDEK 138 (151)
T ss_dssp HTTCHHHHHHHHHHHHHHCCCHH
T ss_pred HcCCHHHHHHHHHHHHHhCCCHH
Confidence 99999999999999999999765
No 16
>2jtt_C Calcyclin-binding protein; S100A6, SIAH-1 interacting protein, ubiquitination, E3 ligase complex, beta-catenin, calcium, cell cycle, mitogen; NMR {Mus musculus}
Probab=99.70 E-value=2e-18 Score=108.14 Aligned_cols=32 Identities=34% Similarity=0.688 Sum_probs=29.4
Q ss_pred chHHHHHHHHHHhcCCCHHHHHHHHhhhhhcC
Q 015029 352 GDAALNKFFQEIYADADEDTRRAMKKSFVESN 383 (414)
Q Consensus 352 ~~~~~~~~f~~iY~~~d~d~kram~KS~~eS~ 383 (414)
++++||+|||+||++|||||||||||||+|||
T Consensus 4 p~~~l~~~fk~iY~~gddd~kram~KS~~eS~ 35 (35)
T 2jtt_C 4 SSEGLMNVLKKIYEDGDDDMKRTINKAWVESR 35 (35)
T ss_dssp -CCSHHHHHHHHHTTCCSSHHHHHHHHHHTTC
T ss_pred hhHHHHHHHHHHHhcCCHHHHHHHHHHHhhcC
Confidence 44579999999999999999999999999997
No 17
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.70 E-value=4.1e-16 Score=135.19 Aligned_cols=113 Identities=27% Similarity=0.361 Sum_probs=106.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~ 81 (414)
++.+...|..++..|+|++|+.+|.++|.++|+++.+++++|.+|+.+|+|++|+.+|++++.++|.+..+|+++|.+|+
T Consensus 11 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~ 90 (164)
T 3sz7_A 11 SDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLGLARF 90 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCChHHHHHHHHHHHHhCCCCHH--HHHHHHHHH
Q 015029 82 KLEEYETAKVALEKGASLAPGDSR--FTNLIKEFV 114 (414)
Q Consensus 82 ~lg~y~~A~~~~~~a~~l~p~~~~--~~~~l~~~~ 114 (414)
.+|+|++|+.+|++++.++|++.. +...+..++
T Consensus 91 ~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~ 125 (164)
T 3sz7_A 91 DMADYKGAKEAYEKGIEAEGNGGSDAMKRGLETTK 125 (164)
T ss_dssp HTTCHHHHHHHHHHHHHHHSSSCCHHHHHHHHHHH
T ss_pred HccCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH
Confidence 999999999999999999999876 444555555
No 18
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.69 E-value=5e-16 Score=133.42 Aligned_cols=115 Identities=12% Similarity=0.160 Sum_probs=108.1
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 015029 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (414)
Q Consensus 3 e~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~ 82 (414)
..+...|..++..|+|++|+..|.+++..+|+++.+++++|.+|..+|+|++|+.+|++++.++|+++.+++.+|.+|..
T Consensus 22 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~ 101 (148)
T 2vgx_A 22 EQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXEPRFPFHAAECLLQ 101 (148)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHHHHHHHHH
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 015029 83 LEEYETAKVALEKGASLAPGDSRFTNLIKEFVGLL 117 (414)
Q Consensus 83 lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~ 117 (414)
+|++++|..+|++++.++|+++.......++...+
T Consensus 102 ~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~l 136 (148)
T 2vgx_A 102 XGELAEAESGLFLAQELIANXPEFXELSTRVSSML 136 (148)
T ss_dssp TTCHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHCcCCCcchHHHHHHHHHH
Confidence 99999999999999999999888777776666443
No 19
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.69 E-value=6.2e-16 Score=131.16 Aligned_cols=115 Identities=11% Similarity=0.146 Sum_probs=108.3
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 015029 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (414)
Q Consensus 3 e~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~ 82 (414)
..+...|..++..|+|++|+.+|.+++..+|+++.+++++|.+|..+|+|++|+.+|++++.++|.++.+++.+|.+|..
T Consensus 19 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~ 98 (142)
T 2xcb_A 19 EQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPRFPFHAAECHLQ 98 (142)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHH
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 015029 83 LEEYETAKVALEKGASLAPGDSRFTNLIKEFVGLL 117 (414)
Q Consensus 83 lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~ 117 (414)
+|++++|..+|++++.++|.++.......++...+
T Consensus 99 ~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~l 133 (142)
T 2xcb_A 99 LGDLDGAESGFYSARALAAAQPAHEALAARAGAML 133 (142)
T ss_dssp TTCHHHHHHHHHHHHHHHHTCGGGHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHH
Confidence 99999999999999999999988777777766444
No 20
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.68 E-value=4.8e-16 Score=133.69 Aligned_cols=111 Identities=18% Similarity=0.137 Sum_probs=103.0
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Q 015029 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKL 83 (414)
Q Consensus 4 ~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~l 83 (414)
.++..|.+++..|+|++|+.+|.++|+++|+++.+|.++|.+|..+|++++|+.+|+++++++|+++.+++.+|.+|+.+
T Consensus 33 ~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~ 112 (150)
T 4ga2_A 33 KGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEENTDKAVECYRRSVELNPTQKDLVLKIAELLCKN 112 (150)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 35778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHH-HHHHHHhCCCCHHHHHHHHHHH
Q 015029 84 EEYETAKVA-LEKGASLAPGDSRFTNLIKEFV 114 (414)
Q Consensus 84 g~y~~A~~~-~~~a~~l~p~~~~~~~~l~~~~ 114 (414)
|++++|... ++++++++|+++.+...+.++.
T Consensus 113 ~~~~~aa~~~~~~al~l~P~~~~~~~l~~~ll 144 (150)
T 4ga2_A 113 DVTDGRAKYWVERAAKLFPGSPAVYKLKEQLL 144 (150)
T ss_dssp CSSSSHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHhCcCCHHHHHHHHHHH
Confidence 999887765 5899999999998877776655
No 21
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.64 E-value=5.1e-15 Score=123.22 Aligned_cols=114 Identities=25% Similarity=0.366 Sum_probs=108.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~ 81 (414)
+..+...|..++..|+|++|+..|.+++..+|+++.+++++|.+|+.+|+|++|+.+|++++.++|.++.+++.+|.+|+
T Consensus 9 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 88 (137)
T 3q49_B 9 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQL 88 (137)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHHHHHH
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCChHHHHHHHHHHHHhCCC-----CHHHHHHHHHHHH
Q 015029 82 KLEEYETAKVALEKGASLAPG-----DSRFTNLIKEFVG 115 (414)
Q Consensus 82 ~lg~y~~A~~~~~~a~~l~p~-----~~~~~~~l~~~~~ 115 (414)
.+|++++|..+|++++.++|+ +..+...+..+..
T Consensus 89 ~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~l~~~~~ 127 (137)
T 3q49_B 89 EMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKK 127 (137)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHTTCCCTTHHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHHHHHHChhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998 7777777777773
No 22
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.63 E-value=9.5e-15 Score=130.53 Aligned_cols=118 Identities=23% Similarity=0.273 Sum_probs=111.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH----------------HHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSA----------------ELFADRAQASIKLQNFTEAVADANRAIEL 65 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~----------------~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l 65 (414)
+..+...|..++..|+|++|+.+|.+++.+.|.++ .++.++|.+|+.+|+|++|+.+|++++.+
T Consensus 38 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~ 117 (198)
T 2fbn_A 38 AFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLKI 117 (198)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 45688999999999999999999999999999887 89999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhh
Q 015029 66 EPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKEFVGLLMQ 119 (414)
Q Consensus 66 ~p~~~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~ 119 (414)
+|.+..+++++|.+|+.+|+|++|+.+|++++.++|.+..+...+..+...++.
T Consensus 118 ~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 171 (198)
T 2fbn_A 118 DKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCVNKLKE 171 (198)
T ss_dssp STTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999988855544
No 23
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.63 E-value=1.5e-14 Score=141.20 Aligned_cols=122 Identities=18% Similarity=0.269 Sum_probs=114.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS---------------AELFADRAQASIKLQNFTEAVADANRAIELE 66 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~---------------~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~ 66 (414)
+..+...|+.++..|+|++|+..|.+||.+.|++ ..+|+++|.||+++|+|++|+.+|++|+.++
T Consensus 147 a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~ 226 (336)
T 1p5q_A 147 STIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELD 226 (336)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 4568899999999999999999999999999999 6999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhhhhhh
Q 015029 67 PSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKEFVGLLMQNAVY 123 (414)
Q Consensus 67 p~~~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~~~ 123 (414)
|.+..+++++|.+|+.+|+|++|+.+|++++.++|.+..+...++.+...++.....
T Consensus 227 p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~a 283 (336)
T 1p5q_A 227 SNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLAR 283 (336)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999888666554443
No 24
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.62 E-value=2.5e-14 Score=114.60 Aligned_cols=113 Identities=26% Similarity=0.435 Sum_probs=108.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~ 81 (414)
++.+...|..++..|+|++|+..|.+++...|.++.++.++|.+|+.+|++++|+..+++++.++|.++.+++.+|.++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~ 83 (118)
T 1elw_A 4 VNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALE 83 (118)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHHHH
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 015029 82 KLEEYETAKVALEKGASLAPGDSRFTNLIKEFV 114 (414)
Q Consensus 82 ~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~ 114 (414)
.+|++++|...|++++.++|.+..+...+..+.
T Consensus 84 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 116 (118)
T 1elw_A 84 FLNRFEEAKRTYEEGLKHEANNPQLKEGLQNME 116 (118)
T ss_dssp HTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHHHHHcCCCCHHHHHHHHHhh
Confidence 999999999999999999999998888887765
No 25
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.62 E-value=7.5e-15 Score=132.86 Aligned_cols=113 Identities=15% Similarity=0.085 Sum_probs=109.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHH----------------HHHHHHHccCHHHHHHHHHHHHHh
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFAD----------------RAQASIKLQNFTEAVADANRAIEL 65 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~----------------ra~~~~kl~~~~~Al~~~~~Ai~l 65 (414)
++.+..+|..++..|+|++|+..|.+++..+|+++.+++. +|.+|.++|+|++|+.+|++++.+
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 83 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQK 83 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 5678999999999999999999999999999999999999 999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 015029 66 EPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKEFV 114 (414)
Q Consensus 66 ~p~~~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~ 114 (414)
+|+++.+++.+|.+|+.+|++++|+.+|++++.++|++..+...++.+.
T Consensus 84 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~ 132 (208)
T 3urz_A 84 APNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYY 132 (208)
T ss_dssp CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999988888776
No 26
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=99.62 E-value=1.9e-15 Score=127.55 Aligned_cols=87 Identities=18% Similarity=0.251 Sum_probs=77.7
Q ss_pred CccccccCCCeEEEEEEeC-C--CCCCceEEEEeeeEEEEEEEcCCCCeeeecccccccccCCcceEEEeCc-EEEEEEe
Q 015029 214 YRHEFYQKPEEVVVTVFAK-G--IPAKNVTVDFGEQILSVSIDVPGEEAYHFQPRLFGKIIPAKCRYEVLST-KVEIRLA 289 (414)
Q Consensus 214 ~r~dW~Qt~~~V~i~i~~k-~--~~~~~v~v~~~~~~l~v~~~~~~~~~y~~~~~L~~~I~p~~s~~~v~~~-kiei~L~ 289 (414)
.+|.|+||.+.|+|+|.++ + +..+++.|+|++++|+|.+. |..+.+.++||++|+|++|+|++.++ .|+|+|.
T Consensus 8 ~~y~W~Qt~~~V~i~I~lp~~~~~~~kdv~V~i~~~~l~v~~k---g~~~~~~~~L~~~I~~e~s~w~i~~~k~v~i~L~ 84 (131)
T 1wfi_A 8 PNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQRRHLRVGLK---GQPPVVDGELYNEVKVEESSWLIEDGKVVTVHLE 84 (131)
T ss_dssp CSSEEEECSSEEEEEECCCCSSCCCTTSEEEEEETTEEEEEET---TSCCSBCSCBSSCBCSTTCEEEEETTTEEEEEEE
T ss_pred CcEEEEecCCEEEEEEECCCCCcccccceEEEEeCCEEEEEEC---CceEEEecccccccccccCEEEEcCCCEEEEEEE
Confidence 3799999999999999987 4 78899999999999999875 44577888999999999999999997 5999999
Q ss_pred eCCC-CCCCccccCC
Q 015029 290 KAEP-IQWSSLEFSK 303 (414)
Q Consensus 290 K~~~-~~W~~L~~~~ 303 (414)
|+++ .+|++|.+.+
T Consensus 85 K~~~~~~W~~L~~~~ 99 (131)
T 1wfi_A 85 KINKMEWWNRLVTSD 99 (131)
T ss_dssp BSSSCCCCSCSBSSC
T ss_pred ECCCCCCChhhhcCC
Confidence 9987 5999999764
No 27
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=99.62 E-value=8.9e-16 Score=133.23 Aligned_cols=86 Identities=23% Similarity=0.367 Sum_probs=76.4
Q ss_pred CCccccccCCCeEEEEEEeC-CCCCCceEEEEeeeEEEEEEEcCCCCeeeecccccccccCCcceEEEeCcE-EEEEEee
Q 015029 213 KYRHEFYQKPEEVVVTVFAK-GIPAKNVTVDFGEQILSVSIDVPGEEAYHFQPRLFGKIIPAKCRYEVLSTK-VEIRLAK 290 (414)
Q Consensus 213 ~~r~dW~Qt~~~V~i~i~~k-~~~~~~v~v~~~~~~l~v~~~~~~~~~y~~~~~L~~~I~p~~s~~~v~~~k-iei~L~K 290 (414)
..+|.|+||.+.|+|+|.++ ++...+|.|+|++++|+|.+. |.. .+.++||++|+|++|+|++.+++ |+|+|.|
T Consensus 13 ~~~y~W~Qt~~eV~v~I~lp~~~~~kdv~V~i~~~~L~v~~k---g~~-~l~g~L~~~I~~eeS~w~i~~~k~v~I~L~K 88 (157)
T 2rh0_A 13 TPWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQSRHVALAVG---GRE-ILKGKLFDSTIADEGTWTLEDRKMVRIVLTK 88 (157)
T ss_dssp CSSEEEEECSSEEEEEEECCTTCCGGGEEEEECSSEEEEEET---TEE-EEEEEBSSCBCGGGCEEEEECCCEEEEEEEB
T ss_pred CCcEEEEecCCEEEEEEECCCCCcccceEEEEecCEEEEEEC---CEE-EEeeccccccCccccEEEEcCCcEEEEEEEE
Confidence 35899999999999999986 677899999999999999875 334 48889999999999999999987 9999999
Q ss_pred CCC---CCCCccccC
Q 015029 291 AEP---IQWSSLEFS 302 (414)
Q Consensus 291 ~~~---~~W~~L~~~ 302 (414)
++. .+|++|.+.
T Consensus 89 ~~~~~~~~W~~L~k~ 103 (157)
T 2rh0_A 89 TKRDAANCWTSLLES 103 (157)
T ss_dssp SSCSTTCCCSEEETT
T ss_pred cCCCcCCcChhhhcC
Confidence 975 799999965
No 28
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.62 E-value=4.4e-15 Score=122.98 Aligned_cols=102 Identities=12% Similarity=0.008 Sum_probs=93.0
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Q 015029 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKL 83 (414)
Q Consensus 4 ~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~l 83 (414)
.++..|..++..|++++|+..|.++|..+|+++.+++.+|.+|..+|++++|+.+|++|+.++|++..+++.+|.+|..+
T Consensus 19 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~~ 98 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNE 98 (121)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 36788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHhCCCCHH
Q 015029 84 EEYETAKVALEKGASLAPGDSR 105 (414)
Q Consensus 84 g~y~~A~~~~~~a~~l~p~~~~ 105 (414)
|++++|+..|+++++++|.+..
T Consensus 99 g~~~~A~~~~~~al~~~P~~~~ 120 (121)
T 1hxi_A 99 HNANAALASLRAWLLSQPQYEQ 120 (121)
T ss_dssp HHHHHHHHHHHHHHC-------
T ss_pred CCHHHHHHHHHHHHHhCcCCCC
Confidence 9999999999999999997653
No 29
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.61 E-value=9.5e-15 Score=148.62 Aligned_cols=120 Identities=21% Similarity=0.258 Sum_probs=109.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS---------------AELFADRAQASIKLQNFTEAVADANRAIELE 66 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~---------------~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~ 66 (414)
+..+..+|+.++..|+|++|+..|.+||.++|.+ ..+|+++|.||+++++|++|+.+|++|+.++
T Consensus 268 a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~ 347 (457)
T 1kt0_A 268 AAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLD 347 (457)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC
Confidence 4578899999999999999999999999999998 7999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhhhh
Q 015029 67 PSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKEFVGLLMQNA 121 (414)
Q Consensus 67 p~~~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~ 121 (414)
|.+..+|+++|.+|+.+|+|++|+.+|+++++++|++..+...+..+...++...
T Consensus 348 p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~ 402 (457)
T 1kt0_A 348 SANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAKEHN 402 (457)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999988886665433
No 30
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.60 E-value=2.2e-14 Score=118.11 Aligned_cols=114 Identities=17% Similarity=0.152 Sum_probs=105.9
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH---HHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC---HHHHH
Q 015029 1 MATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSA---ELFADRAQASIKLQNFTEAVADANRAIELEPSM---SKAYW 74 (414)
Q Consensus 1 ~Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~---~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~---~~a~~ 74 (414)
|++.++..|..++..|+|++|+..|.+++...|++. .+++.+|.+|+.+|+|++|+..|++++.++|++ +.+++
T Consensus 1 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~ 80 (129)
T 2xev_A 1 MARTAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLL 80 (129)
T ss_dssp --CCHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHH
T ss_pred CcHHHHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHH
Confidence 356688999999999999999999999999999998 899999999999999999999999999999998 89999
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 015029 75 RKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKEFV 114 (414)
Q Consensus 75 ~~g~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~ 114 (414)
.+|.+|+.+|++++|...|++++...|++..+...+..+.
T Consensus 81 ~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~l~ 120 (129)
T 2xev_A 81 KLGLSQYGEGKNTEAQQTLQQVATQYPGSDAARVAQERLQ 120 (129)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHCCCChHHHHHHHHHH
Confidence 9999999999999999999999999999998777666655
No 31
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.60 E-value=1.1e-13 Score=118.18 Aligned_cols=113 Identities=31% Similarity=0.466 Sum_probs=107.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~ 81 (414)
++.+...|..++..|+|++|+..|.+++..+|.+..++.++|.+|..+|+|++|+.++.+++.++|.++.+++.+|.+++
T Consensus 13 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~ 92 (166)
T 1a17_A 13 AEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNM 92 (166)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHH
Confidence 56788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 015029 82 KLEEYETAKVALEKGASLAPGDSRFTNLIKEFV 114 (414)
Q Consensus 82 ~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~ 114 (414)
.+|++++|..+|++++.++|.+..+...+..+.
T Consensus 93 ~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~ 125 (166)
T 1a17_A 93 ALGKFRAALRDYETVVKVKPHDKDAKMKYQECN 125 (166)
T ss_dssp HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred HhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 999999999999999999999998877666664
No 32
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.60 E-value=8.6e-14 Score=113.32 Aligned_cols=114 Identities=33% Similarity=0.439 Sum_probs=108.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~ 81 (414)
+..+...|..++..|+|++|+.+|.+++...|+++.++..+|.+|..+|++++|+.++.+++.++|.+..+++.+|.+++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (131)
T 2vyi_A 12 AERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLALS 91 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHHHHHHH
Confidence 35678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 015029 82 KLEEYETAKVALEKGASLAPGDSRFTNLIKEFVG 115 (414)
Q Consensus 82 ~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~ 115 (414)
.+|++++|..+|++++.++|.+..+...+..+..
T Consensus 92 ~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~ 125 (131)
T 2vyi_A 92 SLNKHVEAVAYYKKALELDPDNETYKSNLKIAEL 125 (131)
T ss_dssp HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH
T ss_pred HhCCHHHHHHHHHHHHhcCccchHHHHHHHHHHH
Confidence 9999999999999999999999988888888773
No 33
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.59 E-value=2e-14 Score=118.02 Aligned_cols=113 Identities=28% Similarity=0.421 Sum_probs=108.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~ 81 (414)
...+...|..++..|+|++|+..|.+++..+|.+..++.++|.+|..++++++|+.+|++++.++|.+..+++.+|.+++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~ 95 (133)
T 2lni_A 16 ALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALE 95 (133)
T ss_dssp HHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHHHHHH
Confidence 35788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 015029 82 KLEEYETAKVALEKGASLAPGDSRFTNLIKEFV 114 (414)
Q Consensus 82 ~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~ 114 (414)
.+|++++|..+|++++.++|.+..+...+..+.
T Consensus 96 ~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~ 128 (133)
T 2lni_A 96 AMKDYTKAMDVYQKALDLDSSCKEAADGYQRCM 128 (133)
T ss_dssp HTTCHHHHHHHHHHHHHHCGGGTHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHH
Confidence 999999999999999999999988888888776
No 34
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.59 E-value=2.9e-14 Score=119.47 Aligned_cols=113 Identities=27% Similarity=0.426 Sum_probs=108.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS---AELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKAT 78 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~---~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~ 78 (414)
+..+...|..++..|+|++|+.+|.+++...|++ ..++.++|.+|+.+++|++|+.+|++++.++|.+..+++.+|.
T Consensus 28 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~ 107 (148)
T 2dba_A 28 VEQLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALYRRSQ 107 (148)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHHHHHHH
Confidence 5678899999999999999999999999999998 8999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 015029 79 ACMKLEEYETAKVALEKGASLAPGDSRFTNLIKEFV 114 (414)
Q Consensus 79 ~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~ 114 (414)
+|+.+|++++|..+|++++.++|.+..+...+..+.
T Consensus 108 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 143 (148)
T 2dba_A 108 ALEKLGRLDQAVLDLQRCVSLEPKNKVFQEALRNIS 143 (148)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 999999999999999999999999999888887765
No 35
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.59 E-value=3.1e-14 Score=152.61 Aligned_cols=126 Identities=17% Similarity=0.166 Sum_probs=106.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~ 81 (414)
++.+.+.|+++...|+|++|+.+|.+||+++|+++.+|.++|.+|.++|++++|+.+|++|++++|++..+|+++|.+|.
T Consensus 9 a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~l~ 88 (723)
T 4gyw_A 9 ADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLK 88 (723)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 56788888888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred HcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhhhhhhhhhH
Q 015029 82 KLEEYETAKVALEKGASLAPGDSRFTNLIKEFVGLLMQNAVYLCWN 127 (414)
Q Consensus 82 ~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~~~~~~~ 127 (414)
.+|++++|+.+|+++++++|++..+...++.+...+++-..+....
T Consensus 89 ~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~g~~~eAi~~~ 134 (723)
T 4gyw_A 89 EMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASY 134 (723)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 8888888888888888888888888888888876666555554433
No 36
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.58 E-value=4.2e-14 Score=128.74 Aligned_cols=128 Identities=15% Similarity=0.137 Sum_probs=109.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~ 81 (414)
+..+...|..++..|++++|+..|.++|..+|+++.++.++|.+|..+|++++|+..|++++.++|+++.+++.+|.++.
T Consensus 5 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~ 84 (217)
T 2pl2_A 5 EQNPLRLGVQLYALGRYDAALTLFERALKENPQDPEALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSEAYV 84 (217)
T ss_dssp CHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 35678889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Hc-----------CChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhhhhhhhhhHHH
Q 015029 82 KL-----------EEYETAKVALEKGASLAPGDSRFTNLIKEFVGLLMQNAVYLCWNYE 129 (414)
Q Consensus 82 ~l-----------g~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 129 (414)
.+ |++++|+..|++++.++|++..+...++.+...++..........+
T Consensus 85 ~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~ 143 (217)
T 2pl2_A 85 ALYRQAEDRERGKGYLEQALSVLKDAERVNPRYAPLHLQRGLVYALLGERDKAEASLKQ 143 (217)
T ss_dssp HHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HhhhhhhhhcccccCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCChHHHHHHHHH
Confidence 99 9999999999999999999988888888877666555555444333
No 37
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.57 E-value=9.1e-14 Score=113.38 Aligned_cols=115 Identities=19% Similarity=0.262 Sum_probs=107.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC-------HHHHH
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSM-------SKAYW 74 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~-------~~a~~ 74 (414)
++.+...|..++..|+|++|+.+|.+++...|.++.++.++|.+|..+|++++|+.++++++.++|.+ ..+++
T Consensus 4 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (131)
T 1elr_A 4 ALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAYA 83 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHHHH
Confidence 46788999999999999999999999999999999999999999999999999999999999998876 89999
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 015029 75 RKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKEFVGLL 117 (414)
Q Consensus 75 ~~g~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~ 117 (414)
++|.+|+.+|++++|..+|++++.+.| +......+..+...+
T Consensus 84 ~la~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~l~~~~~~~ 125 (131)
T 1elr_A 84 RIGNSYFKEEKYKDAIHFYNKSLAEHR-TPDVLKKCQQAEKIL 125 (131)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHH
Confidence 999999999999999999999999999 688888888877444
No 38
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=99.57 E-value=1e-14 Score=121.15 Aligned_cols=88 Identities=18% Similarity=0.230 Sum_probs=77.8
Q ss_pred CccccccCCCeEEEEEEeC-C--CCCCceEEEEeeeEEEEEEEcCCCCeeeecccccccccCCcceEEEeCc-EEEEEEe
Q 015029 214 YRHEFYQKPEEVVVTVFAK-G--IPAKNVTVDFGEQILSVSIDVPGEEAYHFQPRLFGKIIPAKCRYEVLST-KVEIRLA 289 (414)
Q Consensus 214 ~r~dW~Qt~~~V~i~i~~k-~--~~~~~v~v~~~~~~l~v~~~~~~~~~y~~~~~L~~~I~p~~s~~~v~~~-kiei~L~ 289 (414)
.+|.|+||.+.|+|+|.++ + +...++.|+|++++|+|.+. |..|.+..+||++|+|++|+|++.+. +|+|+|.
T Consensus 17 ~~y~W~Qt~~eV~v~V~lp~~~~~~~kdv~V~i~~~~l~v~~k---g~~~~~~g~L~~~I~~deS~w~i~~~~~i~i~L~ 93 (121)
T 3qor_A 17 PNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQRRHLRVGLK---GQPAIIDGELYNEVKVEESSWLIADGAVVTVHLE 93 (121)
T ss_dssp SSCEEEECSSEEEEEEECCCSSCCCGGGEEEEEETTEEEEEET---TSCCSEEEEBSSCBCGGGCEEEEETTTEEEEEEE
T ss_pred CCEEEEEccceEEEEEECCCCCcccccceEEEEEcCEEEEEEc---CcceEEeccccccccccccEEEEcCCCEEEEEEE
Confidence 4799999999999999876 4 67899999999999999875 34578889999999999999999986 9999999
Q ss_pred eCCC-CCCCccccCCC
Q 015029 290 KAEP-IQWSSLEFSKG 304 (414)
Q Consensus 290 K~~~-~~W~~L~~~~~ 304 (414)
|.+. .+|++|...+.
T Consensus 94 K~~~~~~W~~L~~~~~ 109 (121)
T 3qor_A 94 KINKMEWWSRLVSSDP 109 (121)
T ss_dssp BSSSSCCCSCSBTTSC
T ss_pred ECCCCCCChhhhcCCC
Confidence 9977 69999987654
No 39
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.56 E-value=3.1e-14 Score=140.95 Aligned_cols=118 Identities=23% Similarity=0.406 Sum_probs=111.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH----------------hCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIE----------------ISPNSAELFADRAQASIKLQNFTEAVADANRAIEL 65 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~----------------~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l 65 (414)
+..+...|+.++..|+|++|+..|.+||+ .+|.+..+|.++|.||+++++|++|+.+|++|+.+
T Consensus 223 a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~ 302 (370)
T 1ihg_A 223 SEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEI 302 (370)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHh
Confidence 46788999999999999999999999999 77888999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhh
Q 015029 66 EPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKEFVGLLMQ 119 (414)
Q Consensus 66 ~p~~~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~ 119 (414)
+|.+..+|+++|.+|+.+|+|++|+.+|+++++++|++..+...+..+...++.
T Consensus 303 ~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~~~~~~~ 356 (370)
T 1ihg_A 303 DPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKVKQKIKA 356 (370)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999888855543
No 40
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.56 E-value=1.6e-13 Score=124.79 Aligned_cols=105 Identities=16% Similarity=0.318 Sum_probs=101.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISP-NSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATAC 80 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P-~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~ 80 (414)
++.++..|..++..|+|++|+..|.+++.++| .+..+++++|.+|+.+|+|++|+.+|++++.++|.+..+++.+|.+|
T Consensus 7 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 86 (228)
T 4i17_A 7 PNQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKSAAY 86 (228)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHHHHH
Confidence 45789999999999999999999999999999 89999999999999999999999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHHHHHhCCCCHHH
Q 015029 81 MKLEEYETAKVALEKGASLAPGDSRF 106 (414)
Q Consensus 81 ~~lg~y~~A~~~~~~a~~l~p~~~~~ 106 (414)
..+|+|++|+..|++++.++|.+..+
T Consensus 87 ~~~~~~~~A~~~~~~al~~~p~~~~~ 112 (228)
T 4i17_A 87 RDMKNNQEYIATLTEGIKAVPGNATI 112 (228)
T ss_dssp HHTTCHHHHHHHHHHHHHHSTTCHHH
T ss_pred HHcccHHHHHHHHHHHHHHCCCcHHH
Confidence 99999999999999999999999954
No 41
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.55 E-value=1.1e-13 Score=148.45 Aligned_cols=128 Identities=17% Similarity=0.141 Sum_probs=119.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~ 81 (414)
+..+.+.|.++...|++++|+.+|.+||+++|+++.+|+++|.+|..+|++++|+.+|++|++++|++..+|+++|.+|.
T Consensus 43 ~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~ 122 (723)
T 4gyw_A 43 AAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHK 122 (723)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhhhhhhhhhHHH
Q 015029 82 KLEEYETAKVALEKGASLAPGDSRFTNLIKEFVGLLMQNAVYLCWNYE 129 (414)
Q Consensus 82 ~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 129 (414)
.+|++++|+.+|+++++++|++..+...++.+...++.-..+.....+
T Consensus 123 ~~g~~~eAi~~~~~Al~l~P~~~~a~~~L~~~l~~~g~~~~A~~~~~k 170 (723)
T 4gyw_A 123 DSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMKK 170 (723)
T ss_dssp HTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCTTHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCCCChHHHhhhhhHHHhcccHHHHHHHHHH
Confidence 999999999999999999999999999999998777666555544443
No 42
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.55 E-value=8.8e-14 Score=138.39 Aligned_cols=127 Identities=13% Similarity=0.010 Sum_probs=107.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccC-HHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQN-FTEAVADANRAIELEPSMSKAYWRKATAC 80 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~-~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~ 80 (414)
++.+...|.++...|+|++|+..|+++|.++|++..+|++||.+|..+|+ +++|+.+|++|+.++|.+..+|+++|.+|
T Consensus 97 ~~a~~~lg~~~~~~g~~~~Al~~~~~al~l~P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~~ 176 (382)
T 2h6f_A 97 RDVYDYFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLV 176 (382)
T ss_dssp HHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCChHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
Confidence 34577788888899999999999999999999999999999999999996 99999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhhhhhhhhhHH
Q 015029 81 MKLEEYETAKVALEKGASLAPGDSRFTNLIKEFVGLLMQNAVYLCWNY 128 (414)
Q Consensus 81 ~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~~~~~~~~ 128 (414)
..+|+|++|+.+|++++.++|++..+...++.+...++.-..+..+..
T Consensus 177 ~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~~g~~~eAl~~~~ 224 (382)
T 2h6f_A 177 EWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVD 224 (382)
T ss_dssp HHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHH
T ss_pred HHccCHHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcCChHHHHHHHH
Confidence 999999999999999999999998888888888866665554444333
No 43
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.55 E-value=2.1e-13 Score=124.06 Aligned_cols=128 Identities=13% Similarity=0.080 Sum_probs=116.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc-----------cCHHHHHHHHHHHHHhCCCCH
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKL-----------QNFTEAVADANRAIELEPSMS 70 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl-----------~~~~~Al~~~~~Ai~l~p~~~ 70 (414)
+..+...|.+++..|++++|+..|.+++.++|+++.++.++|.+|..+ |++++|+..|++++.++|++.
T Consensus 39 ~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~ 118 (217)
T 2pl2_A 39 PEALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPRYA 118 (217)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcccH
Confidence 456788999999999999999999999999999999999999999999 999999999999999999999
Q ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhhhhhhhhhHHHH
Q 015029 71 KAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKEFVGLLMQNAVYLCWNYEL 130 (414)
Q Consensus 71 ~a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 130 (414)
.+++.+|.+|..+|++++|+.+|+++++++ .+..+...++.+...++.......+....
T Consensus 119 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~la~~~~~~g~~~~A~~~~~~a 177 (217)
T 2pl2_A 119 PLHLQRGLVYALLGERDKAEASLKQALALE-DTPEIRSALAELYLSMGRLDEALAQYAKA 177 (217)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHhcc-cchHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 999999999999999999999999999999 99999999998887666655555444443
No 44
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.55 E-value=4.5e-13 Score=117.40 Aligned_cols=124 Identities=14% Similarity=0.157 Sum_probs=103.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~ 81 (414)
+.-+.+.|.+++..|+|++|+..|+++|+++|+++.++..+|.+|.++|++++|+..+.+++...|....+++.+|.++.
T Consensus 5 ~~iy~~lG~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (184)
T 3vtx_A 5 TTIYMDIGDKKRTKGDFDGAIRAYKKVLKADPNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILGSANF 84 (184)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHHHHHH
Confidence 45688999999999999999999999999999999999999999999999999999888888888888877777777777
Q ss_pred HcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhhhhhhhh
Q 015029 82 KLEEYETAKVALEKGASLAPGDSRFTNLIKEFVGLLMQNAVYLC 125 (414)
Q Consensus 82 ~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~~~~~ 125 (414)
..++++.|...+.+++.++|.+..+...++.+...++.-..+..
T Consensus 85 ~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~g~~~~A~~ 128 (184)
T 3vtx_A 85 MIDEKQAAIDALQRAIALNTVYADAYYKLGLVYDSMGEHDKAIE 128 (184)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhCCchhHHH
Confidence 77777777777777777777777777777766655544444433
No 45
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.55 E-value=8.7e-15 Score=125.72 Aligned_cols=114 Identities=11% Similarity=-0.087 Sum_probs=104.0
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChH
Q 015029 8 KAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYE 87 (414)
Q Consensus 8 ~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~lg~y~ 87 (414)
.|..+...|++++|+..|.+++...|.++..++++|.+|+++|+|++|+.+|+++++++|+++.+|+.+|.+|..+|+++
T Consensus 3 LG~~~~~~~~~e~ai~~~~~a~~~~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~ 82 (150)
T 4ga2_A 3 LGSMRRSKADVERYIASVQGSTPSPRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEENTD 82 (150)
T ss_dssp ----CCCHHHHHHHHHHHHHHSCSHHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH
T ss_pred hHHHHHHcChHHHHHHHHHHhcccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCchH
Confidence 47777888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhhhh
Q 015029 88 TAKVALEKGASLAPGDSRFTNLIKEFVGLLMQNA 121 (414)
Q Consensus 88 ~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~ 121 (414)
+|+.+|+++++++|++..+...++.+...++...
T Consensus 83 ~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~ 116 (150)
T 4ga2_A 83 KAVECYRRSVELNPTQKDLVLKIAELLCKNDVTD 116 (150)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCSSS
T ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChH
Confidence 9999999999999999999999998885555433
No 46
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.54 E-value=5.6e-13 Score=107.48 Aligned_cols=113 Identities=22% Similarity=0.364 Sum_probs=107.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~ 81 (414)
+..+...|..++..|++++|+.+|.+++...|.+..++..+|.+|...|++++|+..+++++.++|.+..+++.+|.+|+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~ 88 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYY 88 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHH
Confidence 35678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 015029 82 KLEEYETAKVALEKGASLAPGDSRFTNLIKEFV 114 (414)
Q Consensus 82 ~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~ 114 (414)
.+|++++|...|++++.++|.+..+...+..+.
T Consensus 89 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 121 (125)
T 1na0_A 89 KQGDYDEAIEYYQKALELDPNNAEAKQNLGNAK 121 (125)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Confidence 999999999999999999999999888887776
No 47
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.51 E-value=1.2e-13 Score=137.28 Aligned_cols=115 Identities=7% Similarity=-0.023 Sum_probs=110.3
Q ss_pred HHHHHHHHHHHHHcCC-HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 015029 2 ATDLEKKAKEAFIDDY-FELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATAC 80 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~-y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~ 80 (414)
+..+..+|.++...|+ |++|+..|+++|.++|++..+|++||.+|..+|+|++|+.+|++|+.++|.+..+|+++|.++
T Consensus 131 ~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~ 210 (382)
T 2h6f_A 131 YTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVI 210 (382)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCccCHHHHHHHHHHH
Confidence 4568899999999997 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 015029 81 MKLEEYETAKVALEKGASLAPGDSRFTNLIKEFVGL 116 (414)
Q Consensus 81 ~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~ 116 (414)
..+|+|++|+.+|++++.++|.+..+...++.+...
T Consensus 211 ~~~g~~~eAl~~~~~al~l~P~~~~a~~~lg~~l~~ 246 (382)
T 2h6f_A 211 QEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFVISN 246 (382)
T ss_dssp HHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 999999999999999999999999999998888755
No 48
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.51 E-value=7.5e-14 Score=120.93 Aligned_cols=103 Identities=15% Similarity=0.232 Sum_probs=94.7
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCH----------HHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 015029 12 AFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNF----------TEAVADANRAIELEPSMSKAYWRKATACM 81 (414)
Q Consensus 12 ~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~----------~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~ 81 (414)
.-+.+.|++|+..|.++++++|+++.+|+++|.++..++++ ++|+.+|++||+++|++..+|+.+|.+|.
T Consensus 12 ~~r~~~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~ 91 (158)
T 1zu2_A 12 FDRILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYT 91 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHH
Confidence 34567799999999999999999999999999999999875 59999999999999999999999999999
Q ss_pred HcC-----------ChHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 015029 82 KLE-----------EYETAKVALEKGASLAPGDSRFTNLIKEFV 114 (414)
Q Consensus 82 ~lg-----------~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~ 114 (414)
.+| +|++|+.+|+++++++|++..+...+..+.
T Consensus 92 ~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~~y~~al~~~~ 135 (158)
T 1zu2_A 92 SFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLKSLEMTA 135 (158)
T ss_dssp HHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HhcccCcchhhhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 985 899999999999999999998877776655
No 49
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.50 E-value=2.4e-14 Score=139.85 Aligned_cols=113 Identities=22% Similarity=0.314 Sum_probs=93.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH-----------------HHHHHHHHHHHHccCHHHHHHHHHHHHH
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSA-----------------ELFADRAQASIKLQNFTEAVADANRAIE 64 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~-----------------~~~~~ra~~~~kl~~~~~Al~~~~~Ai~ 64 (414)
+..++..|+.++..|+|++|+.+|.+||.+.|++. .+|+++|.||+++++|++|+.+|++|+.
T Consensus 179 a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~al~ 258 (338)
T 2if4_A 179 ADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIVLT 258 (338)
T ss_dssp HHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 56788999999999999999999999999999887 4899999999999999999999999999
Q ss_pred hCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 015029 65 LEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKEFV 114 (414)
Q Consensus 65 l~p~~~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~ 114 (414)
++|.+..+|+++|.+|+.+|+|++|+.+|++++.++|++..+...+..+.
T Consensus 259 ~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~ 308 (338)
T 2if4_A 259 EEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALA 308 (338)
T ss_dssp HCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC----------------
T ss_pred hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998888888775
No 50
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.49 E-value=4.6e-14 Score=115.44 Aligned_cols=101 Identities=17% Similarity=0.114 Sum_probs=90.0
Q ss_pred HcCCHHHHHHHHHHHHHh---CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHH
Q 015029 14 IDDYFELAYDLYSQAIEI---SPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAK 90 (414)
Q Consensus 14 ~~g~y~~Ai~~y~~AL~~---~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~lg~y~~A~ 90 (414)
..|+|++|+.+|.++|.+ +|+++.+++++|.+|+.+|+|++|+.+|++++.++|+++.+++.+|.+|+.+|++++|+
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~ 81 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQGV 81 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHHHH
Confidence 468999999999999999 58899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHH
Q 015029 91 VALEKGASLAPGDSRFTNLIKEFV 114 (414)
Q Consensus 91 ~~~~~a~~l~p~~~~~~~~l~~~~ 114 (414)
..|++++.+.|.++.+......+.
T Consensus 82 ~~~~~al~~~p~~~~~~~~~~ai~ 105 (117)
T 3k9i_A 82 ELLLKIIAETSDDETIQSYKQAIL 105 (117)
T ss_dssp HHHHHHHHHHCCCHHHHHTHHHHH
T ss_pred HHHHHHHHhCCCcHHHHHHHHHHH
Confidence 999999999999998765544433
No 51
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.49 E-value=2.3e-13 Score=129.17 Aligned_cols=102 Identities=28% Similarity=0.416 Sum_probs=99.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~ 81 (414)
+..+...|+.++..|+|++|+.+|.++|..+|+++.++.++|.+|+++|+|++|+.+|++|+.++|.+..+++++|.+|+
T Consensus 4 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~ 83 (281)
T 2c2l_A 4 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQL 83 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 67889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCChHHHHHHHHHHHHhCCCC
Q 015029 82 KLEEYETAKVALEKGASLAPGD 103 (414)
Q Consensus 82 ~lg~y~~A~~~~~~a~~l~p~~ 103 (414)
.+|+|++|...|++++.++|++
T Consensus 84 ~~g~~~~A~~~~~~al~l~p~~ 105 (281)
T 2c2l_A 84 EMESYDEAIANLQRAYSLAKEQ 105 (281)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHT
T ss_pred HcCCHHHHHHHHHHHHHhCccc
Confidence 9999999999999999999876
No 52
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.48 E-value=8.3e-13 Score=119.95 Aligned_cols=116 Identities=14% Similarity=0.072 Sum_probs=107.7
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCH-------HHHHH
Q 015029 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMS-------KAYWR 75 (414)
Q Consensus 3 e~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~-------~a~~~ 75 (414)
..+...|.+++..|+|++|+.+|.+++..+|+++.++..+|.+|..+|++++|+.+|++++.++|.++ .+|+.
T Consensus 43 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~ 122 (228)
T 4i17_A 43 VTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLK 122 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHH
Confidence 34667999999999999999999999999999999999999999999999999999999999999998 67999
Q ss_pred HHHHHHHcCChHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHHh
Q 015029 76 KATACMKLEEYETAKVALEKGASLAPG--DSRFTNLIKEFVGLLM 118 (414)
Q Consensus 76 ~g~~~~~lg~y~~A~~~~~~a~~l~p~--~~~~~~~l~~~~~~~~ 118 (414)
+|.+++.+|+|++|+.+|+++++++|+ +..+...++.+...++
T Consensus 123 ~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~~ 167 (228)
T 4i17_A 123 EGQKFQQAGNIEKAEENYKHATDVTSKKWKTDALYSLGVLFYNNG 167 (228)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHH
T ss_pred HhHHHHHhccHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999 8888888887774443
No 53
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.48 E-value=2.7e-13 Score=107.59 Aligned_cols=100 Identities=17% Similarity=0.206 Sum_probs=96.4
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHH
Q 015029 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPS--MSKAYWRKATACM 81 (414)
Q Consensus 4 ~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~--~~~a~~~~g~~~~ 81 (414)
.+...|..++..|+|++|+.+|.+++...|.+..++.++|.+|+.+|++++|+.++++++.++|. +..+++.+|.++.
T Consensus 8 ~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~l~~~~~ 87 (112)
T 2kck_A 8 EYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAAKADALR 87 (112)
T ss_dssp GGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHHHHHHHH
Confidence 45678999999999999999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred Hc-CChHHHHHHHHHHHHhCCCC
Q 015029 82 KL-EEYETAKVALEKGASLAPGD 103 (414)
Q Consensus 82 ~l-g~y~~A~~~~~~a~~l~p~~ 103 (414)
.+ |++++|..+|++++...|.+
T Consensus 88 ~~~~~~~~A~~~~~~~~~~~p~~ 110 (112)
T 2kck_A 88 YIEGKEVEAEIAEARAKLEHHHH 110 (112)
T ss_dssp TCSSCSHHHHHHHHHHGGGCCCC
T ss_pred HHhCCHHHHHHHHHHHhhcccCC
Confidence 99 99999999999999999875
No 54
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.48 E-value=3.6e-12 Score=111.56 Aligned_cols=128 Identities=20% Similarity=0.109 Sum_probs=117.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~ 81 (414)
+..+...|.+++..|++++|+..+.+++...|+++.++..+|.++...++++.|+..+.+++.++|.+..+++.+|.+|+
T Consensus 39 ~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~ 118 (184)
T 3vtx_A 39 VETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILGSANFMIDEKQAAIDALQRAIALNTVYADAYYKLGLVYD 118 (184)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHH
Confidence 35678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhhhhhhhhhHHH
Q 015029 82 KLEEYETAKVALEKGASLAPGDSRFTNLIKEFVGLLMQNAVYLCWNYE 129 (414)
Q Consensus 82 ~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 129 (414)
.+|+|++|+.+|+++++++|.+..+...++.+...++....+.....+
T Consensus 119 ~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~ 166 (184)
T 3vtx_A 119 SMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEGKGLRDEAVKYFKK 166 (184)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 999999999999999999999999999999998776665555544433
No 55
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.46 E-value=1.6e-12 Score=117.49 Aligned_cols=105 Identities=16% Similarity=0.171 Sum_probs=90.4
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc----
Q 015029 8 KAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKL---- 83 (414)
Q Consensus 8 ~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~l---- 83 (414)
.|.+++..|+|++|+..|.++|+++|+++.+++++|.+|+.+|++++|+.+|++++.++|+++.+++.+|.+|+.+
T Consensus 60 lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~ 139 (208)
T 3urz_A 60 LALAYKKNRNYDKAYLFYKELLQKAPNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYYYLTAEQE 139 (208)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhHHH
Confidence 8999999999999999999999999999999999999999999999999999999999999998888888777544
Q ss_pred -------------------------------CChHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 015029 84 -------------------------------EEYETAKVALEKGASLAPGDSRFTNLIKEF 113 (414)
Q Consensus 84 -------------------------------g~y~~A~~~~~~a~~l~p~~~~~~~~l~~~ 113 (414)
|+|++|+.+|+++++++|+.. ....+.++
T Consensus 140 ~~~~~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~~-~~~~l~~i 199 (208)
T 3urz_A 140 KKKLETDYKKLSSPTKMQYARYRDGLSKLFTTRYEKARNSLQKVILRFPSTE-AQKTLDKI 199 (208)
T ss_dssp HHHHHHHHC---CCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTTSCCHH-HHHHHHHH
T ss_pred HHHHHHHHHHHhCCCchhHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCHH-HHHHHHHH
Confidence 457778888888888888643 33334433
No 56
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.46 E-value=5.6e-12 Score=102.51 Aligned_cols=117 Identities=21% Similarity=0.286 Sum_probs=108.4
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 015029 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (414)
Q Consensus 3 e~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~ 82 (414)
+.+...|..++..|++++|+.+|.+++...|.+..++..+|.++...|++++|+..+++++.++|....+++.+|.++..
T Consensus 2 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~ 81 (136)
T 2fo7_A 2 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYK 81 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHcCcHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHH
Confidence 56788899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhh
Q 015029 83 LEEYETAKVALEKGASLAPGDSRFTNLIKEFVGLLMQ 119 (414)
Q Consensus 83 lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~ 119 (414)
+|++++|...|++++.+.|.+..+...+..+....+.
T Consensus 82 ~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~ 118 (136)
T 2fo7_A 82 QGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGD 118 (136)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTC
T ss_pred hcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHcc
Confidence 9999999999999999999998877777776643333
No 57
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.45 E-value=1.9e-12 Score=112.91 Aligned_cols=112 Identities=17% Similarity=0.168 Sum_probs=95.4
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH-HHHccCH--HHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 015029 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQA-SIKLQNF--TEAVADANRAIELEPSMSKAYWRKATA 79 (414)
Q Consensus 3 e~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~-~~kl~~~--~~Al~~~~~Ai~l~p~~~~a~~~~g~~ 79 (414)
..+...|.+++..|+|++|+.+|.+++.++|+++.++..+|.+ |+..|++ ++|+..|++++.++|.+..+++.+|.+
T Consensus 45 ~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~ 124 (177)
T 2e2e_A 45 EQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQHMTAQTRAMIDKALALDSNEITALMLLASD 124 (177)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 4567888899999999999999999999999999999999998 7788888 999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 015029 80 CMKLEEYETAKVALEKGASLAPGDSRFTNLIKEFV 114 (414)
Q Consensus 80 ~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~ 114 (414)
|+.+|+|++|...|++++.++|.+......+..+.
T Consensus 125 ~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~i~ 159 (177)
T 2e2e_A 125 AFMQANYAQAIELWQKVMDLNSPRINRTQLVESIN 159 (177)
T ss_dssp HHHTTCHHHHHHHHHHHHHTCCTTSCHHHHHHHHH
T ss_pred HHHcccHHHHHHHHHHHHhhCCCCccHHHHHHHHH
Confidence 99999999999999999999988765544444333
No 58
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.44 E-value=1.5e-13 Score=118.72 Aligned_cols=112 Identities=9% Similarity=-0.156 Sum_probs=101.2
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhC
Q 015029 21 AYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLA 100 (414)
Q Consensus 21 Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l~ 100 (414)
+-..|.+++.++|+++.+++++|.+|+++|+|++|+..|++++.++|.++.+|+.+|.+|+.+|+|++|+.+|++++.++
T Consensus 21 ~~~~l~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~ 100 (151)
T 3gyz_A 21 SGATLKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALG 100 (151)
T ss_dssp TSCCTGGGCCSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred CCCCHHHHhCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhC
Confidence 33557888889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHhhhhhhhhhHHHHHh
Q 015029 101 PGDSRFTNLIKEFVGLLMQNAVYLCWNYELLR 132 (414)
Q Consensus 101 p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 132 (414)
|+++.+...++.|...+++...+.........
T Consensus 101 P~~~~~~~~lg~~~~~lg~~~eA~~~~~~al~ 132 (151)
T 3gyz_A 101 KNDYTPVFHTGQCQLRLKAPLKAKECFELVIQ 132 (151)
T ss_dssp SSCCHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 99999999999999877776666655555443
No 59
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.44 E-value=1.4e-11 Score=106.16 Aligned_cols=111 Identities=13% Similarity=0.130 Sum_probs=60.6
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Q 015029 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLE 84 (414)
Q Consensus 5 ~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~lg 84 (414)
+...|..++..|++++|+.+|.+++...|.+..++..+|.+|...|++++|+..+++++.++|.+..+++.+|.++..+|
T Consensus 45 ~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 124 (186)
T 3as5_A 45 ALHLGIAYVKTGAVDRGTELLERSLADAPDNVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVALDNLG 124 (186)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHHHcC
Confidence 34445555555555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred ChHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 015029 85 EYETAKVALEKGASLAPGDSRFTNLIKEFVG 115 (414)
Q Consensus 85 ~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~ 115 (414)
++++|...|++++.++|.+..+...++.+..
T Consensus 125 ~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~ 155 (186)
T 3as5_A 125 RFDEAIDSFKIALGLRPNEGKVHRAIAFSYE 155 (186)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhcCccchHHHHHHHHHHH
Confidence 5555555555555555555555444444443
No 60
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.42 E-value=4.2e-12 Score=113.55 Aligned_cols=124 Identities=17% Similarity=0.103 Sum_probs=109.5
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 015029 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (414)
Q Consensus 3 e~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~ 82 (414)
..++..|..++..|+|++|+..|.+++ .| ++.+++++|.+|..+|+|++|+.+|++++.++|.+..+++.+|.+|+.
T Consensus 7 ~~~~~~g~~~~~~~~~~~A~~~~~~a~--~~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~~ 83 (213)
T 1hh8_A 7 ISLWNEGVLAADKKDWKGALDAFSAVQ--DP-HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQ 83 (213)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHTSS--SC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHc--CC-ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHH
Confidence 457889999999999999999999996 33 788999999999999999999999999999999999999999999999
Q ss_pred cCChHHHHHHHHHHHHhCCCCH----------------HHHHHHHHHHHHHhhhhhhhhhHHH
Q 015029 83 LEEYETAKVALEKGASLAPGDS----------------RFTNLIKEFVGLLMQNAVYLCWNYE 129 (414)
Q Consensus 83 lg~y~~A~~~~~~a~~l~p~~~----------------~~~~~l~~~~~~~~~~~~~~~~~~~ 129 (414)
+|+|++|+.+|++++.+.|.+. .+...++.+...++....+......
T Consensus 84 ~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~ 146 (213)
T 1hh8_A 84 TEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLAL 146 (213)
T ss_dssp TTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHH
Confidence 9999999999999999998877 7777888887666555555444444
No 61
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.42 E-value=3.3e-12 Score=116.55 Aligned_cols=111 Identities=32% Similarity=0.462 Sum_probs=91.3
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 015029 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (414)
Q Consensus 3 e~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~ 82 (414)
..+...|..++..|+|++|+..|.+++..+|.++.++.++|.+|..+|++++|+.+|++++.++|.++.+++.+|.+|..
T Consensus 140 ~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~ 219 (258)
T 3uq3_A 140 EEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIA 219 (258)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 34567788888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred cCChHHHHHHHHHHHHhC------CCCHHHHHHHHHH
Q 015029 83 LEEYETAKVALEKGASLA------PGDSRFTNLIKEF 113 (414)
Q Consensus 83 lg~y~~A~~~~~~a~~l~------p~~~~~~~~l~~~ 113 (414)
+|++++|...|+++++++ |.+..+...+.+|
T Consensus 220 ~g~~~~A~~~~~~a~~~~~~~~~~p~~~~~~~~l~~~ 256 (258)
T 3uq3_A 220 VKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKA 256 (258)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHT
T ss_pred HhhHHHHHHHHHHHHHhChhhcCCCchHHHHHHHHHh
Confidence 888888888888888888 7777776666554
No 62
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.42 E-value=3.1e-12 Score=118.91 Aligned_cols=106 Identities=14% Similarity=0.144 Sum_probs=100.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC---CHHHHHH
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS---AELFADRAQASIKLQNFTEAVADANRAIELEPS---MSKAYWR 75 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~---~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~---~~~a~~~ 75 (414)
++.++..|..++..|+|++|+..|.+++...|++ +.+++.+|.+|+++|+|++|+..|++++.+.|. ...+++.
T Consensus 15 ~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~ 94 (261)
T 3qky_A 15 PQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYE 94 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHH
Confidence 4678999999999999999999999999999999 899999999999999999999999999999885 4789999
Q ss_pred HHHHHHH--------cCChHHHHHHHHHHHHhCCCCHHHH
Q 015029 76 KATACMK--------LEEYETAKVALEKGASLAPGDSRFT 107 (414)
Q Consensus 76 ~g~~~~~--------lg~y~~A~~~~~~a~~l~p~~~~~~ 107 (414)
+|.+++. +|++++|+..|++++.++|++..+.
T Consensus 95 lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~ 134 (261)
T 3qky_A 95 RAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVD 134 (261)
T ss_dssp HHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHH
T ss_pred HHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCchhHH
Confidence 9999999 9999999999999999999987655
No 63
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.41 E-value=1.3e-11 Score=114.11 Aligned_cols=112 Identities=21% Similarity=0.093 Sum_probs=105.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~ 81 (414)
+..+...|..++..|++++|+.+|.+++..+|+++.++..+|.+|..+|++++|+.+|++++.++|.+..+++.+|.+|+
T Consensus 43 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~ 122 (275)
T 1xnf_A 43 AQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALY 122 (275)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCccccHHHHHHHHHHH
Confidence 34678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCChHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 015029 82 KLEEYETAKVALEKGASLAPGDSRFTNLIKEF 113 (414)
Q Consensus 82 ~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~ 113 (414)
.+|++++|...|++++.++|.+.....++..+
T Consensus 123 ~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~ 154 (275)
T 1xnf_A 123 YGGRDKLAQDDLLAFYQDDPNDPFRSLWLYLA 154 (275)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HhccHHHHHHHHHHHHHhCCCChHHHHHHHHH
Confidence 99999999999999999999998766655544
No 64
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.40 E-value=3.8e-12 Score=113.81 Aligned_cols=103 Identities=15% Similarity=0.088 Sum_probs=97.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCH-----------
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMS----------- 70 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~----------- 70 (414)
+..+...|.+++..|+|++|+.+|.+++..+|+++.+++++|.+|+.+|+|++|+.+|++++.+.|.+.
T Consensus 37 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 116 (213)
T 1hh8_A 37 SRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQF 116 (213)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCC
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhcccc
Confidence 346788999999999999999999999999999999999999999999999999999999999888766
Q ss_pred -----HHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCH
Q 015029 71 -----KAYWRKATACMKLEEYETAKVALEKGASLAPGDS 104 (414)
Q Consensus 71 -----~a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p~~~ 104 (414)
.+++.+|.+|+.+|++++|..+|++++.++|.+.
T Consensus 117 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~ 155 (213)
T 1hh8_A 117 KLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEPR 155 (213)
T ss_dssp EEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSGG
T ss_pred CccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCcccc
Confidence 9999999999999999999999999999999764
No 65
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.40 E-value=4.8e-13 Score=136.83 Aligned_cols=112 Identities=30% Similarity=0.463 Sum_probs=105.9
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 015029 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (414)
Q Consensus 3 e~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~ 82 (414)
+.+...|..++..|+|++|+.+|++||+++|+++.++.++|.+|+++|+|++|+.+|++|++++|.++.+++++|.+|..
T Consensus 7 ~~~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~ 86 (477)
T 1wao_1 7 EELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMA 86 (477)
T ss_dssp TTSSSSSSSTTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 34556788899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCChHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 015029 83 LEEYETAKVALEKGASLAPGDSRFTNLIKEFV 114 (414)
Q Consensus 83 lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~ 114 (414)
+|+|++|..+|+++++++|++..+...++.+.
T Consensus 87 ~g~~~eA~~~~~~al~~~p~~~~~~~~l~~~~ 118 (477)
T 1wao_1 87 LGKFRAALRDYETVVKVKPHDKDAKMKYQECN 118 (477)
T ss_dssp HTCHHHHHHHHHHHHHHSTTCTTHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 99999999999999999999998888888774
No 66
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.40 E-value=2.2e-12 Score=107.45 Aligned_cols=103 Identities=15% Similarity=0.076 Sum_probs=91.6
Q ss_pred HHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHH
Q 015029 27 QAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRF 106 (414)
Q Consensus 27 ~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p~~~~~ 106 (414)
++..++|+.+..+.++|.+|++.|+|++|+.+|++|+.++|.++.+|+.+|.+|+.+|++++|+.+|+++++++|.+..+
T Consensus 4 r~a~inP~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a 83 (126)
T 4gco_A 4 RLAYINPELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKG 83 (126)
T ss_dssp ---CCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHH
Confidence 34457899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhhhhhHHH
Q 015029 107 TNLIKEFVGLLMQNAVYLCWNYE 129 (414)
Q Consensus 107 ~~~l~~~~~~~~~~~~~~~~~~~ 129 (414)
...++.+...++.-..+.....+
T Consensus 84 ~~~lg~~~~~~~~~~~A~~~~~~ 106 (126)
T 4gco_A 84 YIRKAACLVAMREWSKAQRAYED 106 (126)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHH
Confidence 99999999777665555544444
No 67
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.38 E-value=4.8e-13 Score=106.73 Aligned_cols=94 Identities=19% Similarity=0.291 Sum_probs=87.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC------HHHHHH
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSM------SKAYWR 75 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~------~~a~~~ 75 (414)
++.+...|..++..|+|++|+..|.+++.++|+++.++.++|.+|+.+|+|++|+.+|++++.++|.+ ..++++
T Consensus 4 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~ 83 (111)
T 2l6j_A 4 FEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQYR 83 (111)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHHHH
Confidence 46788999999999999999999999999999999999999999999999999999999999999998 999999
Q ss_pred HHHHHHHcCChHHHHHHHHH
Q 015029 76 KATACMKLEEYETAKVALEK 95 (414)
Q Consensus 76 ~g~~~~~lg~y~~A~~~~~~ 95 (414)
+|.++..+|+++.|+..|++
T Consensus 84 ~~~~~~~~~~~~~a~~~~~~ 103 (111)
T 2l6j_A 84 LELAQGAVGSVQIPVVEVDE 103 (111)
T ss_dssp HHHHHHHHHCCCCCSSSSSS
T ss_pred HHHHHHHHHhHhhhHhHHHH
Confidence 99999999998888766553
No 68
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.38 E-value=1.3e-11 Score=128.20 Aligned_cols=130 Identities=14% Similarity=0.037 Sum_probs=118.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~ 81 (414)
+..+...|..++..|+|++|+.+|.++++++|++..++.++|.+|..+|++++|+.+|++++.++|.+..+++.+|.+|.
T Consensus 23 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~ 102 (568)
T 2vsy_A 23 FVAWLMLADAELGMGDTTAGEMAVQRGLALHPGHPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPEHPGIALWLGHALE 102 (568)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 45678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH---hhhhhhhhhHHHHH
Q 015029 82 KLEEYETAKVALEKGASLAPGDSRFTNLIKEFVGLL---MQNAVYLCWNYELL 131 (414)
Q Consensus 82 ~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~ 131 (414)
.+|++++|...|++++.++|++..+...+..+...+ +....+.....+..
T Consensus 103 ~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~g~~~~A~~~~~~al 155 (568)
T 2vsy_A 103 DAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRRLCDWRALDVLSAQVRAAV 155 (568)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCTTHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhccccHHHHHHHHHHHH
Confidence 999999999999999999999999999999888776 55555544444433
No 69
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.38 E-value=1.5e-11 Score=112.16 Aligned_cols=128 Identities=15% Similarity=0.107 Sum_probs=115.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH--------------------------hCCCCHHHHHHHHHHHHHccCHHHH
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIE--------------------------ISPNSAELFADRAQASIKLQNFTEA 55 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~--------------------------~~P~~~~~~~~ra~~~~kl~~~~~A 55 (414)
+..+...|..++..|++++|+..|.+++. .+|.++.++..+|.+|+.+|++++|
T Consensus 79 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A 158 (258)
T 3uq3_A 79 SKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEAYVNPEKAEEARLEGKEYFTKSDWPNA 158 (258)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHhcCHHHH
Confidence 45678899999999999999999999999 6677788999999999999999999
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhhhhhhhhhHHH
Q 015029 56 VADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKEFVGLLMQNAVYLCWNYE 129 (414)
Q Consensus 56 l~~~~~Ai~l~p~~~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 129 (414)
+..|++++.++|.++.+++.+|.+|..+|++++|+..|++++.++|.+..+...++.+...++....+..+...
T Consensus 159 ~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~ 232 (258)
T 3uq3_A 159 VKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIAVKEYASALETLDA 232 (258)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999888666665555544443
No 70
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.37 E-value=1.4e-11 Score=106.07 Aligned_cols=128 Identities=13% Similarity=-0.009 Sum_probs=115.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~ 81 (414)
+..+...|..++..|++++|+..|.+++...|.+..++..+|.+|...|++++|+..+++++.++|.+..+++.+|.+++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~ 87 (186)
T 3as5_A 8 QVYYRDKGISHAKAGRYSQAVMLLEQVYDADAFDVDVALHLGIAYVKTGAVDRGTELLERSLADAPDNVKVATVLGLTYV 87 (186)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHTTTCCTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCccChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 35578899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhhhhhhhhhHHH
Q 015029 82 KLEEYETAKVALEKGASLAPGDSRFTNLIKEFVGLLMQNAVYLCWNYE 129 (414)
Q Consensus 82 ~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 129 (414)
..|++++|...|++++.++|.+..+...++.+....+.-.....+..+
T Consensus 88 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~ 135 (186)
T 3as5_A 88 QVQKYDLAVPLLIKVAEANPINFNVRFRLGVALDNLGRFDEAIDSFKI 135 (186)
T ss_dssp HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHHHcCcHHHHHHHHHH
Confidence 999999999999999999999998888888877655555544444444
No 71
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.37 E-value=3.4e-11 Score=109.06 Aligned_cols=123 Identities=15% Similarity=0.102 Sum_probs=95.5
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 015029 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (414)
Q Consensus 3 e~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~ 82 (414)
..+...|..++..|++++|+..|.+++...|.+..++..+|.+|..+|++++|+..+++++.++|.+..+++.+|.+++.
T Consensus 58 ~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~ 137 (243)
T 2q7f_A 58 IPYINFANLLSSVNELERALAFYDKALELDSSAATAYYGAGNVYVVKEMYKEAKDMFEKALRAGMENGDLFYMLGTVLVK 137 (243)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 45667788888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred cCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhhhhhhhh
Q 015029 83 LEEYETAKVALEKGASLAPGDSRFTNLIKEFVGLLMQNAVYLC 125 (414)
Q Consensus 83 lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~~~~~ 125 (414)
+|++++|...|++++.++|.+..+...++.+....+.-..+..
T Consensus 138 ~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~ 180 (243)
T 2q7f_A 138 LEQPKLALPYLQRAVELNENDTEARFQFGMCLANEGMLDEALS 180 (243)
T ss_dssp TSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCHHHHH
T ss_pred hccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHcCCHHHHHH
Confidence 8888888888888888888877777777666655554444443
No 72
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.36 E-value=1.6e-11 Score=116.72 Aligned_cols=122 Identities=15% Similarity=0.059 Sum_probs=104.5
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHH------------------------
Q 015029 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVAD------------------------ 58 (414)
Q Consensus 3 e~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~------------------------ 58 (414)
+.+...|..++..|++++|+..|.++|..+|+++.+++.+|.+|+.+|++++|+..
T Consensus 118 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~~~~~~l~~ 197 (287)
T 3qou_A 118 ELXAQQAMQLMQESNYTDALPLLXDAWQLSNQNGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGLVAQIELLX 197 (287)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHhCCCHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHHHHHHHHHh
Confidence 45788999999999999999999999999999999999999999999999887544
Q ss_pred ----------HHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCC--HHHHHHHHHHHHHHhhhhhhh
Q 015029 59 ----------ANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGD--SRFTNLIKEFVGLLMQNAVYL 124 (414)
Q Consensus 59 ----------~~~Ai~l~p~~~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p~~--~~~~~~l~~~~~~~~~~~~~~ 124 (414)
+++++.++|++..+++.+|.+|...|++++|+..|.+++.++|++ ..+...+..+...++......
T Consensus 198 ~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~a~ 275 (287)
T 3qou_A 198 QAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAALGTGDALA 275 (287)
T ss_dssp HHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHHCTTCHHH
T ss_pred hcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHHHHHHcCCCCcHH
Confidence 555577788899999999999999999999999999999999987 777777887776665544433
No 73
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.36 E-value=5e-11 Score=107.90 Aligned_cols=117 Identities=20% Similarity=0.204 Sum_probs=66.3
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 015029 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (414)
Q Consensus 3 e~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~ 82 (414)
..+...|..++..|+|++|+.+|.+++..+|.+..++..+|.+|..+|++++|+..|++++.++|.+..+++.+|.++..
T Consensus 24 ~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~ 103 (243)
T 2q7f_A 24 MTGGQQMGRGSEFGDYEKAAEAFTKAIEENKEDAIPYINFANLLSSVNELERALAFYDKALELDSSAATAYYGAGNVYVV 103 (243)
T ss_dssp ------------------CCTTHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcchHHHHHHHHHHHH
Confidence 34556666666666777777767666666666666666666666666777777777777666666666666666766666
Q ss_pred cCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhh
Q 015029 83 LEEYETAKVALEKGASLAPGDSRFTNLIKEFVGLLMQ 119 (414)
Q Consensus 83 lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~ 119 (414)
+|++++|...|++++.++|.+..+...++.+....+.
T Consensus 104 ~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 140 (243)
T 2q7f_A 104 KEMYKEAKDMFEKALRAGMENGDLFYMLGTVLVKLEQ 140 (243)
T ss_dssp TTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHTSC
T ss_pred hccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcc
Confidence 7777777766666666666666665555555544433
No 74
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.35 E-value=1.6e-11 Score=118.55 Aligned_cols=120 Identities=17% Similarity=0.207 Sum_probs=93.3
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 015029 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (414)
Q Consensus 3 e~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~ 82 (414)
..+...|..++..|++++|+.+|.+++..+|+++.++.++|.+|..+|++++|+..|++++.++|.+..+++.+|.+|..
T Consensus 218 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~ 297 (368)
T 1fch_A 218 DVQCGLGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGISCIN 297 (368)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Confidence 45567788888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred cCChHHHHHHHHHHHHhCCCC-----------HHHHHHHHHHHHHHhhhhh
Q 015029 83 LEEYETAKVALEKGASLAPGD-----------SRFTNLIKEFVGLLMQNAV 122 (414)
Q Consensus 83 lg~y~~A~~~~~~a~~l~p~~-----------~~~~~~l~~~~~~~~~~~~ 122 (414)
+|++++|...|++++.++|.+ ..+...++.+...++....
T Consensus 298 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~ 348 (368)
T 1fch_A 298 LGAHREAVEHFLEALNMQRKSRGPRGEGGAMSENIWSTLRLALSMLGQSDA 348 (368)
T ss_dssp HTCHHHHHHHHHHHHHHHHTC------CCCCCHHHHHHHHHHHHHHTCGGG
T ss_pred CCCHHHHHHHHHHHHHhCCCCCCccccccchhhHHHHHHHHHHHHhCChHh
Confidence 888888888888888887776 5666666666655544333
No 75
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.35 E-value=2.8e-12 Score=109.86 Aligned_cols=112 Identities=14% Similarity=0.023 Sum_probs=101.2
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCC
Q 015029 22 YDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAP 101 (414)
Q Consensus 22 i~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p 101 (414)
-..|.+++.++|++..+++++|.+++..|+|++|+..|.+++.++|.++.+|+.+|.+|+.+|+|++|+.+|++++.++|
T Consensus 7 ~~~~~~al~~~p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p 86 (148)
T 2vgx_A 7 GGTIAMLNEISSDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDI 86 (148)
T ss_dssp CCSHHHHTTCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST
T ss_pred hhhHHHHHcCCHhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCC
Confidence 34688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHhhhhhhhhhHHHHHhh
Q 015029 102 GDSRFTNLIKEFVGLLMQNAVYLCWNYELLRR 133 (414)
Q Consensus 102 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 133 (414)
++..+...++.+...++....+..+.......
T Consensus 87 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 118 (148)
T 2vgx_A 87 XEPRFPFHAAECLLQXGELAEAESGLFLAQEL 118 (148)
T ss_dssp TCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 99999999999997777776666655554433
No 76
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.35 E-value=3.8e-12 Score=135.75 Aligned_cols=121 Identities=9% Similarity=-0.121 Sum_probs=111.7
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 015029 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (414)
Q Consensus 3 e~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~ 82 (414)
+.+...|..++..|+|++|+..|+++++.+|+++.+++++|.+|+.+|+|++|+.+|++|++++|++..+++.+|.+|..
T Consensus 434 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~ 513 (681)
T 2pzi_A 434 ELPLMEVRALLDLGDVAKATRKLDDLAERVGWRWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPGELAPKLALAATAEL 513 (681)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHhcCCHHHHHHHHHHHhccCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH
Confidence 56788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhhhhhhh
Q 015029 83 LEEYETAKVALEKGASLAPGDSRFTNLIKEFVGLLMQNAVYL 124 (414)
Q Consensus 83 lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~~~~ 124 (414)
+|+|++ +.+|+++++++|++..+...++.+...++....+.
T Consensus 514 ~g~~~~-~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~ 554 (681)
T 2pzi_A 514 AGNTDE-HKFYQTVWSTNDGVISAAFGLARARSAEGDRVGAV 554 (681)
T ss_dssp HTCCCT-TCHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred cCChHH-HHHHHHHHHhCCchHHHHHHHHHHHHHcCCHHHHH
Confidence 999999 99999999999999999999988886665554443
No 77
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.35 E-value=2.3e-11 Score=116.07 Aligned_cols=111 Identities=14% Similarity=0.181 Sum_probs=105.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~ 81 (414)
++.+...|..++..|+|++|+..|.+++..+|+++.+++.+|.+|+.+|++++|+..|++++.++|.+..+++.+|.++.
T Consensus 3 ~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 82 (359)
T 3ieg_A 3 VEKHLELGKKLLAAGQLADALSQFHAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIALKMDFTAARLQRGHLLL 82 (359)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcchHHHHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCChHHHHHHHHHHHHhCC---CCHHHHHHHHH
Q 015029 82 KLEEYETAKVALEKGASLAP---GDSRFTNLIKE 112 (414)
Q Consensus 82 ~lg~y~~A~~~~~~a~~l~p---~~~~~~~~l~~ 112 (414)
.+|++++|...|++++.++| .+..+...+..
T Consensus 83 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~ 116 (359)
T 3ieg_A 83 KQGKLDEAEDDFKKVLKSNPSEQEEKEAESQLVK 116 (359)
T ss_dssp HHTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHH
T ss_pred HcCChHHHHHHHHHHHhcCCcccChHHHHHHHHH
Confidence 99999999999999999999 77777766643
No 78
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.35 E-value=3.2e-11 Score=115.11 Aligned_cols=114 Identities=20% Similarity=0.202 Sum_probs=106.3
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH----HHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 015029 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPNSA----ELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATAC 80 (414)
Q Consensus 5 ~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~----~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~ 80 (414)
....|..++..|++++|+..|.+++...|++. .++..+|.+|..+|++++|+.+|++++.++|.++.+++.+|.+|
T Consensus 237 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (359)
T 3ieg_A 237 LIESAEELIRDGRYTDATSKYESVMKTEPSVAEYTVRSKERICHCFSKDEKPVEAIRICSEVLQMEPDNVNALKDRAEAY 316 (359)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccHHHHHHHHHHH
Confidence 45669999999999999999999999999987 45778999999999999999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHh
Q 015029 81 MKLEEYETAKVALEKGASLAPGDSRFTNLIKEFVGLLM 118 (414)
Q Consensus 81 ~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~ 118 (414)
..+|++++|..+|+++++++|++..+...+.++...++
T Consensus 317 ~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~~ 354 (359)
T 3ieg_A 317 LIEEMYDEAIQDYEAAQEHNENDQQIREGLEKAQRLLK 354 (359)
T ss_dssp HHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998885544
No 79
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.34 E-value=9.1e-12 Score=127.03 Aligned_cols=115 Identities=16% Similarity=0.061 Sum_probs=109.1
Q ss_pred HHHHHHHHHHHHHcCCH-HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 015029 2 ATDLEKKAKEAFIDDYF-ELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATAC 80 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y-~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~ 80 (414)
+..+...|..++..|+| ++|+.+|.++|+++|+++.+++++|.+|+.+|++++|+.+|++|+.++|+ ..+++.+|.+|
T Consensus 102 a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~lg~~~ 180 (474)
T 4abn_A 102 AQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPELVEAWNQLGEVYWKKGDVTSAHTCFSGALTHCKN-KVSLQNLSMVL 180 (474)
T ss_dssp HHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCCC-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-HHHHHHHHHHH
Confidence 46688999999999999 99999999999999999999999999999999999999999999999998 79999999999
Q ss_pred HHc---------CChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 015029 81 MKL---------EEYETAKVALEKGASLAPGDSRFTNLIKEFVGLL 117 (414)
Q Consensus 81 ~~l---------g~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~ 117 (414)
..+ |+|++|+.+|++++.++|++..+...++.+...+
T Consensus 181 ~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~ 226 (474)
T 4abn_A 181 RQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSL 226 (474)
T ss_dssp TTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHhccCChhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Confidence 999 9999999999999999999999888888877554
No 80
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.34 E-value=5.6e-11 Score=105.96 Aligned_cols=124 Identities=11% Similarity=-0.020 Sum_probs=96.6
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 015029 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (414)
Q Consensus 3 e~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~ 82 (414)
..+...|..++..|++++|+..|.+++...|++..++..+|.+|..+|++++|+..+++++.++|.+..+++.+|.+|+.
T Consensus 9 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~ 88 (225)
T 2vq2_A 9 NIKTQLAMEYMRGQDYRQATASIEDALKSDPKNELAWLVRAEIYQYLKVNDKAQESFRQALSIKPDSAEINNNYGWFLCG 88 (225)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCChHHHHHHHHHHHH
Confidence 45677788888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred c-CChHHHHHHHHHHHH--hCCCCHHHHHHHHHHHHHHhhhhhhhhh
Q 015029 83 L-EEYETAKVALEKGAS--LAPGDSRFTNLIKEFVGLLMQNAVYLCW 126 (414)
Q Consensus 83 l-g~y~~A~~~~~~a~~--l~p~~~~~~~~l~~~~~~~~~~~~~~~~ 126 (414)
+ |++++|...|++++. ..|.+..+...++.+....+.-..+..+
T Consensus 89 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~ 135 (225)
T 2vq2_A 89 RLNRPAESMAYFDKALADPTYPTPYIANLNKGICSAKQGQFGLAEAY 135 (225)
T ss_dssp TTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred hcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHHHHHcCCHHHHHHH
Confidence 8 888888888888888 5555566666666666554444444333
No 81
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.34 E-value=2.3e-11 Score=110.91 Aligned_cols=108 Identities=17% Similarity=0.129 Sum_probs=98.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCH---HHHHH
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS---AELFADRAQASIKLQNFTEAVADANRAIELEPSMS---KAYWR 75 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~---~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~---~a~~~ 75 (414)
++.++..|..++..|+|++|+..|.+++...|.+ ..+++.+|.+|+++|+|++|+..|++++.++|.+. .+++.
T Consensus 4 ~~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~ 83 (225)
T 2yhc_A 4 PNEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYM 83 (225)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHHH
Confidence 5678999999999999999999999999999887 47899999999999999999999999999999875 48999
Q ss_pred HHHHHHH------------------cCChHHHHHHHHHHHHhCCCCHHHHHH
Q 015029 76 KATACMK------------------LEEYETAKVALEKGASLAPGDSRFTNL 109 (414)
Q Consensus 76 ~g~~~~~------------------lg~y~~A~~~~~~a~~l~p~~~~~~~~ 109 (414)
+|.+++. +|++++|+..|++++...|++..+...
T Consensus 84 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~a 135 (225)
T 2yhc_A 84 RGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTTDA 135 (225)
T ss_dssp HHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCTTHHHH
T ss_pred HHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHHHH
Confidence 9999987 578999999999999999998765443
No 82
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.34 E-value=1e-11 Score=126.72 Aligned_cols=119 Identities=13% Similarity=0.046 Sum_probs=110.7
Q ss_pred HHHHHHHHHHHHc---------CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc--------cCHHHHHHHHHHHHHh
Q 015029 3 TDLEKKAKEAFID---------DYFELAYDLYSQAIEISPNSAELFADRAQASIKL--------QNFTEAVADANRAIEL 65 (414)
Q Consensus 3 e~~~~~g~~~~~~---------g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl--------~~~~~Al~~~~~Ai~l 65 (414)
..+...|.+++.. |+|++|+.+|.++++++|+++.+++++|.+|..+ |+|++|+.+|++|+.+
T Consensus 171 ~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~ 250 (474)
T 4abn_A 171 VSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKV 250 (474)
T ss_dssp HHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHh
Confidence 4567788899998 9999999999999999999999999999999999 9999999999999999
Q ss_pred CC---CCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhhhh
Q 015029 66 EP---SMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKEFVGLLMQNA 121 (414)
Q Consensus 66 ~p---~~~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~ 121 (414)
+| .++.+|+.+|.+|+.+|+|++|..+|++++.++|++..+...+..+...++.-.
T Consensus 251 ~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~a~~~l~~~~~~lg~~~ 309 (474)
T 4abn_A 251 DRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPAWPEPQQREQQLLEFLSRLT 309 (474)
T ss_dssp CGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHH
T ss_pred CCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHH
Confidence 99 999999999999999999999999999999999999998888888876655433
No 83
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.33 E-value=2.6e-11 Score=112.08 Aligned_cols=118 Identities=16% Similarity=0.108 Sum_probs=98.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~ 81 (414)
+..+...|.+++..|++++|+.+|.+++..+|.++.++.++|.+|..+|++++|+.+|++++.++|.++.+++.+|..++
T Consensus 74 ~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~ 153 (272)
T 3u4t_A 74 SADFEYYGKILMKKGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTDPKVFYELGQAYY 153 (272)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCCcHHHHHHHHHHHH
Confidence 34567888888888888888888888888888888888888888888888888888888888888888888888885555
Q ss_pred HcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhh
Q 015029 82 KLEEYETAKVALEKGASLAPGDSRFTNLIKEFVGLLMQ 119 (414)
Q Consensus 82 ~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~ 119 (414)
..+++++|..+|+++++++|.+......++.+...++.
T Consensus 154 ~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~ 191 (272)
T 3u4t_A 154 YNKEYVKADSSFVKVLELKPNIYIGYLWRARANAAQDP 191 (272)
T ss_dssp HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCc
Confidence 56688888888888888888888877777777766544
No 84
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.32 E-value=3.6e-11 Score=111.63 Aligned_cols=116 Identities=18% Similarity=0.077 Sum_probs=104.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHH--------ccCHHHHHHHHHHHHHhCCCCH
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS---AELFADRAQASIK--------LQNFTEAVADANRAIELEPSMS 70 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~---~~~~~~ra~~~~k--------l~~~~~Al~~~~~Ai~l~p~~~ 70 (414)
++.++..|.+++..|+|++|+..|.++|...|++ +.+++.+|.+|+. +|++++|+..|++++.+.|++.
T Consensus 52 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~ 131 (261)
T 3qky_A 52 ADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHE 131 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCT
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCch
Confidence 4567899999999999999999999999998855 6789999999999 9999999999999999999876
Q ss_pred HHH-----------------HHHHHHHHHcCChHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHH
Q 015029 71 KAY-----------------WRKATACMKLEEYETAKVALEKGASLAPGD---SRFTNLIKEFVGLL 117 (414)
Q Consensus 71 ~a~-----------------~~~g~~~~~lg~y~~A~~~~~~a~~l~p~~---~~~~~~l~~~~~~~ 117 (414)
.+. +.+|.+|+.+|+|++|+..|++++...|++ ..+...++.+...+
T Consensus 132 ~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~ 198 (261)
T 3qky_A 132 LVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDTPWADDALVGAMRAYIAY 198 (261)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHh
Confidence 555 999999999999999999999999999984 45777777777655
No 85
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.32 E-value=8.3e-12 Score=108.79 Aligned_cols=123 Identities=11% Similarity=0.107 Sum_probs=105.3
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHH-HHHcCCh-
Q 015029 9 AKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATA-CMKLEEY- 86 (414)
Q Consensus 9 g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~-~~~lg~y- 86 (414)
+..++..|+|++|+..|.+++..+|+++.++..+|.+|+.+|+|++|+..|++++.++|.++.+++.+|.+ ++..|++
T Consensus 17 ~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~~ 96 (177)
T 2e2e_A 17 LHQFASQQNPEAQLQALQDKIRANPQNSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQHM 96 (177)
T ss_dssp TCCCC-----CCCCHHHHHHHHHCCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCC
T ss_pred hhhhhhccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCcc
Confidence 44567789999999999999999999999999999999999999999999999999999999999999999 8899999
Q ss_pred -HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhhhhhhhhhHHHHH
Q 015029 87 -ETAKVALEKGASLAPGDSRFTNLIKEFVGLLMQNAVYLCWNYELL 131 (414)
Q Consensus 87 -~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 131 (414)
++|..+|++++.++|.+..+...++.+...++....+..+.....
T Consensus 97 ~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al 142 (177)
T 2e2e_A 97 TAQTRAMIDKALALDSNEITALMLLASDAFMQANYAQAIELWQKVM 142 (177)
T ss_dssp CHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcccHHHHHHHHHHHH
Confidence 999999999999999999999888888866665555554444433
No 86
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.32 E-value=2.1e-11 Score=118.26 Aligned_cols=127 Identities=16% Similarity=0.075 Sum_probs=109.1
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Q 015029 6 EKKAKEAFIDDYFELAYDLYSQAIEISPN--SAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKL 83 (414)
Q Consensus 6 ~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~--~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~l 83 (414)
...|..+...|++++|+.+|.+++..+|+ ++.++.++|.+|..+|++++|+..|++++.++|.++.+++.+|.+|..+
T Consensus 181 ~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~ 260 (365)
T 4eqf_A 181 RRMSKSPVDSSVLEGVKELYLEAAHQNGDMIDPDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPEDYSLWNRLGATLANG 260 (365)
T ss_dssp --------CCHHHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHhCcCccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 34588999999999999999999999999 8999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhhhhhhhhhHHHHHh
Q 015029 84 EEYETAKVALEKGASLAPGDSRFTNLIKEFVGLLMQNAVYLCWNYELLR 132 (414)
Q Consensus 84 g~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 132 (414)
|++++|+..|++++.++|.+..+...++.+...++.-..+.....+...
T Consensus 261 g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 309 (365)
T 4eqf_A 261 DRSEEAVEAYTRALEIQPGFIRSRYNLGISCINLGAYREAVSNFLTALS 309 (365)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 9999999999999999999999999999988777766666555554433
No 87
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.32 E-value=2.4e-11 Score=117.81 Aligned_cols=102 Identities=19% Similarity=0.270 Sum_probs=98.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~ 81 (414)
+..+...|..++..|++++|+..|.+++...|+++.++.++|.+|..+|++++|+..|++++.++|.+..+++.+|.+|.
T Consensus 213 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 292 (365)
T 4eqf_A 213 PDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPEDYSLWNRLGATLANGDRSEEAVEAYTRALEIQPGFIRSRYNLGISCI 292 (365)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHH
Confidence 34577899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCChHHHHHHHHHHHHhCCCC
Q 015029 82 KLEEYETAKVALEKGASLAPGD 103 (414)
Q Consensus 82 ~lg~y~~A~~~~~~a~~l~p~~ 103 (414)
.+|++++|..+|++++.++|.+
T Consensus 293 ~~g~~~~A~~~~~~al~~~~~~ 314 (365)
T 4eqf_A 293 NLGAYREAVSNFLTALSLQRKS 314 (365)
T ss_dssp HHTCCHHHHHHHHHHHHHHHCC
T ss_pred HCCCHHHHHHHHHHHHHhCccc
Confidence 9999999999999999999874
No 88
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.31 E-value=4.5e-11 Score=109.36 Aligned_cols=120 Identities=18% Similarity=0.065 Sum_probs=83.8
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 015029 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (414)
Q Consensus 3 e~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~ 82 (414)
..+...|..++..|++++|+..|.+++..+|.+..++..+|.+|...|++++|+..+++++.++|.+..+++.+|.+|+.
T Consensus 38 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~ 117 (252)
T 2ho1_A 38 DAYIQLGLGYLQRGNTEQAKVPLRKALEIDPSSADAHAALAVVFQTEMEPKLADEEYRKALASDSRNARVLNNYGGFLYE 117 (252)
T ss_dssp HHHHHHHHHHHHTTCTGGGHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHhcCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHH
Confidence 44566777777777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred cCChHHHHHHHHHHHH--hCCCCHHHHHHHHHHHHHHhhhhh
Q 015029 83 LEEYETAKVALEKGAS--LAPGDSRFTNLIKEFVGLLMQNAV 122 (414)
Q Consensus 83 lg~y~~A~~~~~~a~~--l~p~~~~~~~~l~~~~~~~~~~~~ 122 (414)
+|++++|...|++++. ..|.+..+...++.+....+.-..
T Consensus 118 ~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~ 159 (252)
T 2ho1_A 118 QKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQMKKPAQ 159 (252)
T ss_dssp TTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHTTCHHH
T ss_pred HhHHHHHHHHHHHHHhCccCcccHHHHHHHHHHHHHcCCHHH
Confidence 7777777777777776 566666655556555544443333
No 89
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.31 E-value=6.8e-11 Score=108.13 Aligned_cols=127 Identities=13% Similarity=0.066 Sum_probs=112.1
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHH--hCCCCHHHHHHHHHHH
Q 015029 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIE--LEPSMSKAYWRKATAC 80 (414)
Q Consensus 3 e~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~--l~p~~~~a~~~~g~~~ 80 (414)
..+...|..++..|++++|+.+|.+++...|.+..++..+|.+|..+|++++|+..|++++. ..|....+++.+|.+|
T Consensus 72 ~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~ 151 (252)
T 2ho1_A 72 DAHAALAVVFQTEMEPKLADEEYRKALASDSRNARVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVS 151 (252)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHHhHHHHHHHHHHHHHhCccCcccHHHHHHHHHHH
Confidence 45678899999999999999999999999999999999999999999999999999999999 8888899999999999
Q ss_pred HHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhhhhhhhhhHHH
Q 015029 81 MKLEEYETAKVALEKGASLAPGDSRFTNLIKEFVGLLMQNAVYLCWNYE 129 (414)
Q Consensus 81 ~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 129 (414)
+.+|++++|...|++++.++|.+..+...++.+...++....+..+...
T Consensus 152 ~~~g~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 200 (252)
T 2ho1_A 152 LQMKKPAQAKEYFEKSLRLNRNQPSVALEMADLLYKEREYVPARQYYDL 200 (252)
T ss_dssp HHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 9999999999999999999999998888888877666555554444433
No 90
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.31 E-value=9.4e-11 Score=104.45 Aligned_cols=129 Identities=16% Similarity=0.043 Sum_probs=112.8
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc-cCHHHHHHHHHHHHH--hCCCCHHHHHHHHHH
Q 015029 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKL-QNFTEAVADANRAIE--LEPSMSKAYWRKATA 79 (414)
Q Consensus 3 e~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl-~~~~~Al~~~~~Ai~--l~p~~~~a~~~~g~~ 79 (414)
..+...|..++..|++++|+.+|.+++...|.+..++..+|.+|..+ |++++|+..+++++. ..|....+++.+|.+
T Consensus 43 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~ 122 (225)
T 2vq2_A 43 LAWLVRAEIYQYLKVNDKAQESFRQALSIKPDSAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLNKGIC 122 (225)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHH
Confidence 45677899999999999999999999999999999999999999999 999999999999999 667778999999999
Q ss_pred HHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhhhhhhhhhHHHHH
Q 015029 80 CMKLEEYETAKVALEKGASLAPGDSRFTNLIKEFVGLLMQNAVYLCWNYELL 131 (414)
Q Consensus 80 ~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 131 (414)
+..+|++++|+..|++++.++|.+..+...++.+....+....+........
T Consensus 123 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~ 174 (225)
T 2vq2_A 123 SAKQGQFGLAEAYLKRSLAAQPQFPPAFKELARTKMLAGQLGDADYYFKKYQ 174 (225)
T ss_dssp HHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 9999999999999999999999999888888888766665555554444433
No 91
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.31 E-value=3.1e-11 Score=97.70 Aligned_cols=84 Identities=14% Similarity=0.161 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHH
Q 015029 19 ELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGAS 98 (414)
Q Consensus 19 ~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~lg~y~~A~~~~~~a~~ 98 (414)
..|+..|.+++..+|+++.+++++|.+|+.+|++++|+..|++++.++|.+..+++.+|.+|..+|++++|...|++++.
T Consensus 2 ~~a~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 81 (115)
T 2kat_A 2 QAITERLEAMLAQGTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAWESGLA 81 (115)
T ss_dssp CCHHHHHHHHHTTTCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 36899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCC
Q 015029 99 LAPG 102 (414)
Q Consensus 99 l~p~ 102 (414)
++|.
T Consensus 82 ~~~~ 85 (115)
T 2kat_A 82 AAQS 85 (115)
T ss_dssp HHHH
T ss_pred hccc
Confidence 9874
No 92
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.30 E-value=3.9e-11 Score=104.95 Aligned_cols=117 Identities=13% Similarity=0.081 Sum_probs=88.1
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHH-----------------------
Q 015029 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADAN----------------------- 60 (414)
Q Consensus 4 ~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~----------------------- 60 (414)
.+...|..++..|++++|+..|.+++..+|+++.+++.+|.+|+.+|++++|+..++
T Consensus 8 ~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~ 87 (176)
T 2r5s_A 8 QLLKQVSELLQQGEHAQALNVIQTLSDELQSRGDVKLAKADCLLETKQFELAQELLATIPLEYQDNSYKSLIAKLELHQQ 87 (176)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHHTSCHHHHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccCChHHHHHHHHHHHHhh
Confidence 467788889999999999999999999999999999999999998888877765544
Q ss_pred -----------HHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCC--HHHHHHHHHHHHHHhhh
Q 015029 61 -----------RAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGD--SRFTNLIKEFVGLLMQN 120 (414)
Q Consensus 61 -----------~Ai~l~p~~~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p~~--~~~~~~l~~~~~~~~~~ 120 (414)
+++.++|+++.+++.+|.++..+|++++|...|++++.++|.. ..+...+..+...++..
T Consensus 88 ~~~~~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~ 160 (176)
T 2r5s_A 88 AAESPELKRLEQELAANPDNFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQG 160 (176)
T ss_dssp HTSCHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSS
T ss_pred cccchHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCC
Confidence 4455566677777777777777777777777777777777754 44666666666444443
No 93
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.29 E-value=5.7e-11 Score=116.26 Aligned_cols=109 Identities=17% Similarity=0.162 Sum_probs=54.5
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC
Q 015029 6 EKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEE 85 (414)
Q Consensus 6 ~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~lg~ 85 (414)
...|..++..|++++|+..+..++..+|.++.++..+|.+|.+.|++++|+..|++++.++|++..+++.+|.++..+|+
T Consensus 37 ~~l~~~~~~~~~~~~a~~~~~~a~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~ 116 (388)
T 1w3b_A 37 LLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGD 116 (388)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHcCC
Confidence 34444455555555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred hHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 015029 86 YETAKVALEKGASLAPGDSRFTNLIKEFV 114 (414)
Q Consensus 86 y~~A~~~~~~a~~l~p~~~~~~~~l~~~~ 114 (414)
+++|...|++++.++|++..+...++.+.
T Consensus 117 ~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 145 (388)
T 1w3b_A 117 MEGAVQAYVSALQYNPDLYCVRSDLGNLL 145 (388)
T ss_dssp SSHHHHHHHHHHHHCTTCTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Confidence 55555555555555554444444444333
No 94
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.29 E-value=7.7e-11 Score=95.61 Aligned_cols=101 Identities=24% Similarity=0.396 Sum_probs=95.9
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 015029 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (414)
Q Consensus 3 e~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~ 82 (414)
..+...|..++..|++++|+.+|.+++...|.+..++..+|.+|...|++++|+..+++++.+.|.+..+++.+|.++..
T Consensus 36 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~ 115 (136)
T 2fo7_A 36 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYK 115 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH
Confidence 34567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCChHHHHHHHHHHHHhCCCC
Q 015029 83 LEEYETAKVALEKGASLAPGD 103 (414)
Q Consensus 83 lg~y~~A~~~~~~a~~l~p~~ 103 (414)
+|++++|...|.+++.++|.+
T Consensus 116 ~~~~~~A~~~~~~~~~~~~~~ 136 (136)
T 2fo7_A 116 QGDYDEAIEYYQKALELDPRS 136 (136)
T ss_dssp TTCHHHHHHHHHHHHHHSTTC
T ss_pred HccHHHHHHHHHHHHccCCCC
Confidence 999999999999999998863
No 95
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.29 E-value=1.9e-11 Score=113.08 Aligned_cols=117 Identities=13% Similarity=0.039 Sum_probs=98.2
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC--C-CHHHHHHHHHH
Q 015029 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEP--S-MSKAYWRKATA 79 (414)
Q Consensus 3 e~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p--~-~~~a~~~~g~~ 79 (414)
+.+...|..++..|+|++|+..|.++++.+|+++.++..+|.+|+.+|+|++|+..|++++...+ . ...+++.+|.+
T Consensus 4 ~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~lg~~ 83 (272)
T 3u4t_A 4 DVEFRYADFLFKNNNYAEAIEVFNKLEAKKYNSPYIYNRRAVCYYELAKYDLAQKDIETYFSKVNATKAKSADFEYYGKI 83 (272)
T ss_dssp -CHHHHHHHHHTTTCHHHHHHHHHHHHHTTCCCSTTHHHHHHHHHHTTCHHHHHHHHHHHHTTSCTTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHhccCchhHHHHHHHHHHHH
Confidence 45678899999999999999999999999999988899999999999999999999999998332 2 25668999999
Q ss_pred HHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhh
Q 015029 80 CMKLEEYETAKVALEKGASLAPGDSRFTNLIKEFVGLLMQ 119 (414)
Q Consensus 80 ~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~ 119 (414)
+..+|++++|+.+|++++.++|.+..+...++.+...++.
T Consensus 84 ~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~ 123 (272)
T 3u4t_A 84 LMKKGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYNKGN 123 (272)
T ss_dssp HHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTC
T ss_pred HHHcccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHccC
Confidence 9999999999999999999999888888888877754443
No 96
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.29 E-value=1.3e-11 Score=104.32 Aligned_cols=110 Identities=14% Similarity=0.014 Sum_probs=96.9
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCC
Q 015029 23 DLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPG 102 (414)
Q Consensus 23 ~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p~ 102 (414)
..|.+++..+|++...++.+|.+++..|+|++|+..|++++.++|.++.+|+.+|.+|+.+|+|++|+.+|++++.++|+
T Consensus 5 ~~l~~al~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 84 (142)
T 2xcb_A 5 GTLAMLRGLSEDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDIN 84 (142)
T ss_dssp ----CCTTCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred hhHHHHHcCCHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCC
Confidence 46788889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHhhhhhhhhhHHHHHh
Q 015029 103 DSRFTNLIKEFVGLLMQNAVYLCWNYELLR 132 (414)
Q Consensus 103 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 132 (414)
++.+...++.+...++....+..+......
T Consensus 85 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 114 (142)
T 2xcb_A 85 EPRFPFHAAECHLQLGDLDGAESGFYSARA 114 (142)
T ss_dssp CTHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 999999999998777776666655554433
No 97
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.28 E-value=7e-12 Score=133.67 Aligned_cols=112 Identities=10% Similarity=-0.055 Sum_probs=106.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~ 81 (414)
++.+...|.+++..|+|++|+..|++||+++|+++.+++++|.+|.++|+|++ +.+|++|++++|.+..+|+++|.+|.
T Consensus 467 ~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~~~~a~~~lg~~~~ 545 (681)
T 2pzi_A 467 WRLVWYRAVAELLTGDYDSATKHFTEVLDTFPGELAPKLALAATAELAGNTDE-HKFYQTVWSTNDGVISAAFGLARARS 545 (681)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCChHH-HHHHHHHHHhCCchHHHHHHHHHHHH
Confidence 45688999999999999999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 015029 82 KLEEYETAKVALEKGASLAPGDSRFTNLIKEFV 114 (414)
Q Consensus 82 ~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~ 114 (414)
.+|++++|+.+|+++++++|.+..+...++.+.
T Consensus 546 ~~g~~~~A~~~~~~al~l~P~~~~a~~~~~~~~ 578 (681)
T 2pzi_A 546 AEGDRVGAVRTLDEVPPTSRHFTTARLTSAVTL 578 (681)
T ss_dssp HTTCHHHHHHHHHTSCTTSTTHHHHHHHHHHHT
T ss_pred HcCCHHHHHHHHHhhcccCcccHHHHHHHHHHH
Confidence 999999999999999999999988887777665
No 98
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.28 E-value=1e-10 Score=114.48 Aligned_cols=115 Identities=15% Similarity=0.071 Sum_probs=66.8
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Q 015029 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLE 84 (414)
Q Consensus 5 ~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~lg 84 (414)
+...|..+...|++++|+.+|.+++.++|++..++.++|.++...|++++|+..|.+++.++|.+..+++.+|.+|..+|
T Consensus 172 ~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g 251 (388)
T 1w3b_A 172 WSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQG 251 (388)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcCCHHHHHHHHHHHHHcC
Confidence 44455555555555555555555555555555555555555555555666666666666666655566666666666666
Q ss_pred ChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhh
Q 015029 85 EYETAKVALEKGASLAPGDSRFTNLIKEFVGLLMQ 119 (414)
Q Consensus 85 ~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~ 119 (414)
++++|+..|++++.++|.+..+...++.+....+.
T Consensus 252 ~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~ 286 (388)
T 1w3b_A 252 LIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGS 286 (388)
T ss_dssp CHHHHHHHHHHHHHTCSSCHHHHHHHHHHHHHHSC
T ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCC
Confidence 66666666666666666655555555554433333
No 99
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.27 E-value=1.1e-10 Score=110.45 Aligned_cols=126 Identities=11% Similarity=-0.037 Sum_probs=87.1
Q ss_pred HHHHHHHHHHHcC-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 015029 4 DLEKKAKEAFIDD-YFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (414)
Q Consensus 4 ~~~~~g~~~~~~g-~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~ 82 (414)
.+...|..++..| ++++|+.+|.+++..+|+++.++..+|.+|..+|++++|+..|++++.+.|.+..+++.+|.+|..
T Consensus 92 ~~~~l~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~ 171 (330)
T 3hym_B 92 SWFAVGCYYLMVGHKNEHARRYLSKATTLEKTYGPAWIAYGHSFAVESEHDQAMAAYFTAAQLMKGCHLPMLYIGLEYGL 171 (330)
T ss_dssp HHHHHHHHHHHSCSCHHHHHHHHHHHHTTCTTCTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhccccHHHHHHHHHHHHH
Confidence 4556677777777 777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred cCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhhhhhhhhhHHH
Q 015029 83 LEEYETAKVALEKGASLAPGDSRFTNLIKEFVGLLMQNAVYLCWNYE 129 (414)
Q Consensus 83 lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 129 (414)
+|++++|...|++++.++|.+..+...++.+....+.-..+..+..+
T Consensus 172 ~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~ 218 (330)
T 3hym_B 172 TNNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQNGEWKTAEKWFLD 218 (330)
T ss_dssp TTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 77777777777777777777776666666666544444444433333
No 100
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.27 E-value=1.5e-10 Score=115.04 Aligned_cols=109 Identities=14% Similarity=0.197 Sum_probs=103.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~ 81 (414)
++.+...|..++..|+|++|+.+|++++..+|+++.+++.+|.+|+.+|++++|+.+|++++.++|.+..+++.+|.+|.
T Consensus 26 ~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 105 (450)
T 2y4t_A 26 VEKHLELGKKLLAAGQLADALSQFHAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDFTAARLQRGHLLL 105 (450)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Confidence 45678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCChHHHHHHHHHHHHhCCCCH---HHHHHH
Q 015029 82 KLEEYETAKVALEKGASLAPGDS---RFTNLI 110 (414)
Q Consensus 82 ~lg~y~~A~~~~~~a~~l~p~~~---~~~~~l 110 (414)
.+|++++|...|++++.++|.+. .+...+
T Consensus 106 ~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~l 137 (450)
T 2y4t_A 106 KQGKLDEAEDDFKKVLKSNPSENEEKEAQSQL 137 (450)
T ss_dssp HTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHhcCCCChhhHHHHHHH
Confidence 99999999999999999999987 555544
No 101
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.27 E-value=8.4e-11 Score=107.13 Aligned_cols=122 Identities=12% Similarity=0.044 Sum_probs=104.3
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH---HHHHHHHHHHHH------------------ccCHHHHHHHHHH
Q 015029 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSA---ELFADRAQASIK------------------LQNFTEAVADANR 61 (414)
Q Consensus 3 e~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~---~~~~~ra~~~~k------------------l~~~~~Al~~~~~ 61 (414)
..+...|.+++..|+|++|+..|++++...|++. .+++.+|.+|+. +|++++|+..|++
T Consensus 42 ~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~ 121 (225)
T 2yhc_A 42 QVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSK 121 (225)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHH
Confidence 4678899999999999999999999999999986 489999999987 5789999999999
Q ss_pred HHHhCCCCHHHH-----------------HHHHHHHHHcCChHHHHHHHHHHHHhCCCCH---HHHHHHHHHHHHHhhhh
Q 015029 62 AIELEPSMSKAY-----------------WRKATACMKLEEYETAKVALEKGASLAPGDS---RFTNLIKEFVGLLMQNA 121 (414)
Q Consensus 62 Ai~l~p~~~~a~-----------------~~~g~~~~~lg~y~~A~~~~~~a~~l~p~~~---~~~~~l~~~~~~~~~~~ 121 (414)
++...|++..++ +.+|.+|+..|+|.+|+..|+++++..|+++ .+...++.+...++...
T Consensus 122 ~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~~ 201 (225)
T 2yhc_A 122 LVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMNA 201 (225)
T ss_dssp HHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHCcCCCccHHHHHHHHHHHHHcCCcH
Confidence 999999876543 6789999999999999999999999999987 45666777775555544
Q ss_pred hhh
Q 015029 122 VYL 124 (414)
Q Consensus 122 ~~~ 124 (414)
.+.
T Consensus 202 ~A~ 204 (225)
T 2yhc_A 202 QAE 204 (225)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 102
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.26 E-value=1.3e-10 Score=109.64 Aligned_cols=115 Identities=15% Similarity=0.264 Sum_probs=92.5
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 015029 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (414)
Q Consensus 3 e~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~ 82 (414)
..+...|..++..|++++|+.+|.+++..+|+++.++..+|.+|..+|++++|+..|++++.++|.+..+++.+|.+|..
T Consensus 173 ~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~ 252 (327)
T 3cv0_A 173 QLHASLGVLYNLSNNYDSAAANLRRAVELRPDDAQLWNKLGATLANGNRPQEALDAYNRALDINPGYVRVMYNMAVSYSN 252 (327)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH
Confidence 34566788888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred cCChHHHHHHHHHHHHhCCC------------CHHHHHHHHHHHHHH
Q 015029 83 LEEYETAKVALEKGASLAPG------------DSRFTNLIKEFVGLL 117 (414)
Q Consensus 83 lg~y~~A~~~~~~a~~l~p~------------~~~~~~~l~~~~~~~ 117 (414)
+|++++|...|++++.++|. +..+...++.+...+
T Consensus 253 ~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 299 (327)
T 3cv0_A 253 MSQYDLAAKQLVRAIYMQVGGTTPTGEASREATRSMWDFFRMLLNVM 299 (327)
T ss_dssp TTCHHHHHHHHHHHHHHHTTSCC-----CCTHHHHHHHHHHHHHHHT
T ss_pred hccHHHHHHHHHHHHHhCCccccccccchhhcCHHHHHHHHHHHHhc
Confidence 88888888888888888887 566666666666433
No 103
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.26 E-value=6.3e-11 Score=119.36 Aligned_cols=103 Identities=20% Similarity=0.313 Sum_probs=98.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~ 81 (414)
++.+...|+.++..|+|++|+..|++++..+| ++.++.++|.+|+++|++++|+.+|++++.++|.+..+++.+|.+|+
T Consensus 6 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 84 (514)
T 2gw1_A 6 ALALKDKGNQFFRNKKYDDAIKYYNWALELKE-DPVFYSNLSACYVSVGDLKKVVEMSTKALELKPDYSKVLLRRASANE 84 (514)
T ss_dssp HHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhcCc-cHHHHHhHHHHHHHHhhHHHHHHHHHHHhccChHHHHHHHHHHHHHH
Confidence 67899999999999999999999999999999 68999999999999999999999999999999999999999999999
Q ss_pred HcCChHHHHHHHHHHHHhCCCCHH
Q 015029 82 KLEEYETAKVALEKGASLAPGDSR 105 (414)
Q Consensus 82 ~lg~y~~A~~~~~~a~~l~p~~~~ 105 (414)
.+|++++|...|++++.++|.+..
T Consensus 85 ~~g~~~~A~~~~~~~~~~~~~~~~ 108 (514)
T 2gw1_A 85 GLGKFADAMFDLSVLSLNGDFNDA 108 (514)
T ss_dssp HTTCHHHHHHHHHHHHHSSSCCGG
T ss_pred HHhhHHHHHHHHHHHHhcCCCccc
Confidence 999999999999999999986543
No 104
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.24 E-value=1.9e-10 Score=108.73 Aligned_cols=125 Identities=14% Similarity=0.157 Sum_probs=105.1
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Q 015029 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLE 84 (414)
Q Consensus 5 ~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~lg 84 (414)
+...|..++..|+|++|+.+|.+++..+|.+..++..++.+++.+|++++|+..+.+++.++|.++.+++.+|.+++.+|
T Consensus 25 ~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 104 (330)
T 3hym_B 25 VVSLAERHYYNCDFKMCYKLTSVVMEKDPFHASCLPVHIGTLVELNKANELFYLSHKLVDLYPSNPVSWFAVGCYYLMVG 104 (330)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHcCCCChhhHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHhh
Confidence 56788888999999999999999999999988888888899999999999999999999999998899999999999999
Q ss_pred -ChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhhhhhhhhhHHH
Q 015029 85 -EYETAKVALEKGASLAPGDSRFTNLIKEFVGLLMQNAVYLCWNYE 129 (414)
Q Consensus 85 -~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 129 (414)
++++|..+|++++.++|.+..+...++.+....+.-..+......
T Consensus 105 ~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~ 150 (330)
T 3hym_B 105 HKNEHARRYLSKATTLEKTYGPAWIAYGHSFAVESEHDQAMAAYFT 150 (330)
T ss_dssp SCHHHHHHHHHHHHTTCTTCTHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHccCHHHHHHHHHH
Confidence 899999999999999998888888888777665555444444333
No 105
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.23 E-value=1.5e-10 Score=88.64 Aligned_cols=79 Identities=24% Similarity=0.350 Sum_probs=43.6
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Q 015029 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKL 83 (414)
Q Consensus 5 ~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~l 83 (414)
+...|..++..|+|++|+.+|.+++..+|+++.++.++|.+|+.+|++++|+..|++++.++|.+..+++.+|.++..+
T Consensus 12 ~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~ 90 (91)
T 1na3_A 12 WYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQKQ 90 (91)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhc
Confidence 4445555555555555555555555555555555555555555555555555555555555555555555555555443
No 106
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.23 E-value=2.1e-10 Score=113.89 Aligned_cols=115 Identities=21% Similarity=0.210 Sum_probs=106.7
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH----HHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 015029 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPNSA----ELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATAC 80 (414)
Q Consensus 5 ~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~----~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~ 80 (414)
+...|..++..|++++|+.+|.+++...|+++ .++..+|.+|.++|++++|+..+++++.++|.+..+++.+|.+|
T Consensus 260 ~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~ 339 (450)
T 2y4t_A 260 LIESAEELIRDGRYTDATSKYESVMKTEPSIAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQMEPDNVNALKDRAEAY 339 (450)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccHHHHHHHHHHH
Confidence 35569999999999999999999999999984 48899999999999999999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhh
Q 015029 81 MKLEEYETAKVALEKGASLAPGDSRFTNLIKEFVGLLMQ 119 (414)
Q Consensus 81 ~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~ 119 (414)
..+|++++|..+|+++++++|++..+...+..+...++.
T Consensus 340 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 378 (450)
T 2y4t_A 340 LIEEMYDEAIQDYETAQEHNENDQQIREGLEKAQRLLKQ 378 (450)
T ss_dssp HHTTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHH
T ss_pred HHhcCHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHhhc
Confidence 999999999999999999999999999999888755433
No 107
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.21 E-value=2.8e-11 Score=94.98 Aligned_cols=91 Identities=19% Similarity=0.122 Sum_probs=78.8
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH-HHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Q 015029 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPNSAE-LFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKL 83 (414)
Q Consensus 5 ~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~-~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~l 83 (414)
.+.+|..++..|+|++|+..|.+++..+|+++. +++++|.+|+.+|++++|+.+|++++.++|++..++++
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~-------- 74 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQAR-------- 74 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHH--------
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHH--------
Confidence 467899999999999999999999999999998 99999999999999999999999999999998888754
Q ss_pred CChHHHHHHHHHHHHhCCCC
Q 015029 84 EEYETAKVALEKGASLAPGD 103 (414)
Q Consensus 84 g~y~~A~~~~~~a~~l~p~~ 103 (414)
+.+.+|..+|+++..++|++
T Consensus 75 ~~~~~a~~~~~~~~~~~p~~ 94 (99)
T 2kc7_A 75 KMVMDILNFYNKDMYNQLEH 94 (99)
T ss_dssp HHHHHHHHHHCCTTHHHHCC
T ss_pred HHHHHHHHHHHHHhccCccc
Confidence 56677788887777777654
No 108
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.21 E-value=3.1e-10 Score=109.39 Aligned_cols=123 Identities=15% Similarity=0.097 Sum_probs=110.8
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC
Q 015029 8 KAKEAFIDDYFELAYDLYSQAIEISPN--SAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEE 85 (414)
Q Consensus 8 ~g~~~~~~g~y~~Ai~~y~~AL~~~P~--~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~lg~ 85 (414)
.|.. +..|++++|+..|.+++..+|. ++.++.++|.+|..+|++++|+..|++++.++|.++.+++.+|.++..+|+
T Consensus 188 ~~~~-~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~ 266 (368)
T 1fch_A 188 LGSL-LSDSLFLEVKELFLAAVRLDPTSIDPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQ 266 (368)
T ss_dssp THHH-HHHHHHHHHHHHHHHHHHHSTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred HHHH-hhcccHHHHHHHHHHHHHhCcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHcCC
Confidence 3444 4899999999999999999999 899999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhhhhhhhhhHHHHH
Q 015029 86 YETAKVALEKGASLAPGDSRFTNLIKEFVGLLMQNAVYLCWNYELL 131 (414)
Q Consensus 86 y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 131 (414)
+++|+..|++++.++|.+..+...++.+...++.-..+..+.....
T Consensus 267 ~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al 312 (368)
T 1fch_A 267 SEEAVAAYRRALELQPGYIRSRYNLGISCINLGAHREAVEHFLEAL 312 (368)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 9999999999999999999999999988877766666555544433
No 109
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.20 E-value=3e-10 Score=108.21 Aligned_cols=119 Identities=10% Similarity=-0.010 Sum_probs=92.6
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH--HHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 015029 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQA--SIKLQNFTEAVADANRAIELEPSMSKAYWRKATAC 80 (414)
Q Consensus 3 e~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~--~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~ 80 (414)
+.+...|.++...|++++|+..|.+++..+|++....+..+.+ +...|++++|+..|++++..+|.++.+++.+|.++
T Consensus 131 ~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~p~~~~~~~~la~~~ 210 (291)
T 3mkr_A 131 ECMAMTVQILLKLDRLDLARKELKKMQDQDEDATLTQLATAWVSLAAGGEKLQDAYYIFQEMADKCSPTLLLLNGQAACH 210 (291)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Confidence 4566778888888888888888888888888876444333322 22347888888888888888888888888888888
Q ss_pred HHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhhhh
Q 015029 81 MKLEEYETAKVALEKGASLAPGDSRFTNLIKEFVGLLMQNA 121 (414)
Q Consensus 81 ~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~ 121 (414)
..+|++++|...|++++.++|+++.+...+..+...++...
T Consensus 211 ~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~~~ 251 (291)
T 3mkr_A 211 MAQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQHLGKPP 251 (291)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCH
T ss_pred HHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCH
Confidence 88888888888888888888888888877777776655543
No 110
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.19 E-value=6.9e-10 Score=105.71 Aligned_cols=100 Identities=8% Similarity=0.057 Sum_probs=85.9
Q ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHH-HHHH
Q 015029 14 IDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYET-AKVA 92 (414)
Q Consensus 14 ~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~lg~y~~-A~~~ 92 (414)
..|++++|+..|++++...|+++.++.++|.+|+++|++++|+.++++++.++|+++.+++++|.++..+|++.+ |..+
T Consensus 178 ~~~~~~eA~~~~~~~l~~~p~~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~~~eaa~~~ 257 (291)
T 3mkr_A 178 GGEKLQDAYYIFQEMADKCSPTLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQHLGKPPEVTNRY 257 (291)
T ss_dssp CTTHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 348899999999999999999999999999999999999999999999999999999999999999999999876 4678
Q ss_pred HHHHHHhCCCCHHHHHHHHHH
Q 015029 93 LEKGASLAPGDSRFTNLIKEF 113 (414)
Q Consensus 93 ~~~a~~l~p~~~~~~~~l~~~ 113 (414)
+++++.++|+++.+.....+.
T Consensus 258 ~~~~~~~~P~~~~~~d~~~~~ 278 (291)
T 3mkr_A 258 LSQLKDAHRSHPFIKEYRAKE 278 (291)
T ss_dssp HHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHhCCCChHHHHHHHHH
Confidence 888999999998776654443
No 111
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.19 E-value=2.2e-10 Score=98.76 Aligned_cols=104 Identities=12% Similarity=0.032 Sum_probs=92.2
Q ss_pred CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHHHH
Q 015029 32 SPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIK 111 (414)
Q Consensus 32 ~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~ 111 (414)
.+.++..++.+|.+|+..|+|++|+.+|++++.++|.+..+|+.+|.+|+.+|+|++|+.+|++++.++|.+..+...++
T Consensus 7 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg 86 (164)
T 3sz7_A 7 PTPESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLG 86 (164)
T ss_dssp CCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 34567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhhhhhHHHHHhhhc
Q 015029 112 EFVGLLMQNAVYLCWNYELLRRVG 135 (414)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~ 135 (414)
.+...++.-..+..+..+......
T Consensus 87 ~~~~~~g~~~~A~~~~~~al~~~p 110 (164)
T 3sz7_A 87 LARFDMADYKGAKEAYEKGIEAEG 110 (164)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHS
T ss_pred HHHHHccCHHHHHHHHHHHHHhCC
Confidence 999777776666666555544433
No 112
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.19 E-value=2.6e-10 Score=93.49 Aligned_cols=97 Identities=18% Similarity=0.053 Sum_probs=86.8
Q ss_pred CCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 015029 33 PNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKE 112 (414)
Q Consensus 33 P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~ 112 (414)
|..+..+..+|.++++.|+|++|+..|++++.++|.++.+++.+|.+|+.+|+|++|+.+|++++.++|.+..+...++.
T Consensus 1 p~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~ 80 (126)
T 3upv_A 1 SMKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKAT 80 (126)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 34567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhhhhhHHH
Q 015029 113 FVGLLMQNAVYLCWNYE 129 (414)
Q Consensus 113 ~~~~~~~~~~~~~~~~~ 129 (414)
+...++.-..+.....+
T Consensus 81 ~~~~~~~~~~A~~~~~~ 97 (126)
T 3upv_A 81 AQIAVKEYASALETLDA 97 (126)
T ss_dssp HHHHTTCHHHHHHHHHH
T ss_pred HHHHHhCHHHHHHHHHH
Confidence 88776665555544444
No 113
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.18 E-value=3e-10 Score=115.39 Aligned_cols=125 Identities=14% Similarity=0.130 Sum_probs=85.4
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Q 015029 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKL 83 (414)
Q Consensus 4 ~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~l 83 (414)
.+...|..++..|++++|+.+|.+++..+|+++.++..+|.+|..+|++++|+..|++++.++|.+..+++.+|.+|+.+
T Consensus 278 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~ 357 (537)
T 3fp2_A 278 SYIFLALTLADKENSQEFFKFFQKAVDLNPEYPPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYKQ 357 (537)
T ss_dssp HHHHHHHHTCCSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCSHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 34556666666777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred CChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhhhhhhhhhHH
Q 015029 84 EEYETAKVALEKGASLAPGDSRFTNLIKEFVGLLMQNAVYLCWNY 128 (414)
Q Consensus 84 g~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~~~~~~~~ 128 (414)
|++++|...|++++.++|.+..+...++.+....+....+..+..
T Consensus 358 g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~ 402 (537)
T 3fp2_A 358 GKFTESEAFFNETKLKFPTLPEVPTFFAEILTDRGDFDTAIKQYD 402 (537)
T ss_dssp TCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 777777777777777777777666666666655544444444333
No 114
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.17 E-value=2.1e-10 Score=111.67 Aligned_cols=96 Identities=17% Similarity=0.156 Sum_probs=89.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~ 81 (414)
+..+.+.|.+++..|+|++|+.+|+++|.++|+++.+|+++|.+|+.+|+|++|+.+|++|+.++|.+..+++.+|.++.
T Consensus 196 ~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~ 275 (336)
T 1p5q_A 196 LASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQ 275 (336)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCChHHHH-HHHHHHH
Q 015029 82 KLEEYETAK-VALEKGA 97 (414)
Q Consensus 82 ~lg~y~~A~-~~~~~a~ 97 (414)
.+|++++|. ..|.+++
T Consensus 276 ~~~~~~~a~~~~~~~~~ 292 (336)
T 1p5q_A 276 RIRRQLAREKKLYANMF 292 (336)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 999999994 4565554
No 115
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.17 E-value=1.6e-10 Score=106.66 Aligned_cols=118 Identities=13% Similarity=-0.011 Sum_probs=104.1
Q ss_pred HHcCCHHHHHHHHHHHHHhC----CCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHH
Q 015029 13 FIDDYFELAYDLYSQAIEIS----PNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYET 88 (414)
Q Consensus 13 ~~~g~y~~Ai~~y~~AL~~~----P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~lg~y~~ 88 (414)
...|+|++|+..|.+++... |.++.+++.+|.+|..+|++++|+..|++++.++|.++.+++.+|.+|..+|+|++
T Consensus 16 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~ 95 (275)
T 1xnf_A 16 QPTLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDA 95 (275)
T ss_dssp CCCHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHH
T ss_pred CccchHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHccCHHH
Confidence 34688999999999999974 45688999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHHhhhhhhhhhHHHH
Q 015029 89 AKVALEKGASLAPGDSRFTNLIKEFVGLLMQNAVYLCWNYEL 130 (414)
Q Consensus 89 A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 130 (414)
|+.+|++++.++|.+..+...++.+...++.-..+.....+.
T Consensus 96 A~~~~~~al~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 137 (275)
T 1xnf_A 96 AYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAF 137 (275)
T ss_dssp HHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCccccHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 999999999999999998888888886666555555444443
No 116
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.17 E-value=3e-10 Score=107.19 Aligned_cols=107 Identities=11% Similarity=0.017 Sum_probs=99.1
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Q 015029 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKL 83 (414)
Q Consensus 4 ~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~l 83 (414)
.++..|..++..|+|++|+..|.+++..+|++..++..+|.+|..+|++++|+..+++++.++|.+..+++.+|.+|..+
T Consensus 23 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~ 102 (327)
T 3cv0_A 23 NPMEEGLSMLKLANLAEAALAFEAVCQAAPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNE 102 (327)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHc
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHhCCCCHHHHHHH
Q 015029 84 EEYETAKVALEKGASLAPGDSRFTNLI 110 (414)
Q Consensus 84 g~y~~A~~~~~~a~~l~p~~~~~~~~l 110 (414)
|++++|...|++++.++|.+......+
T Consensus 103 ~~~~~A~~~~~~~~~~~~~~~~~~~~~ 129 (327)
T 3cv0_A 103 HNANAALASLRAWLLSQPQYEQLGSVN 129 (327)
T ss_dssp TCHHHHHHHHHHHHHTSTTTTTC----
T ss_pred CCHHHHHHHHHHHHHhCCccHHHHHHH
Confidence 999999999999999999876544433
No 117
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.15 E-value=5.4e-10 Score=94.99 Aligned_cols=96 Identities=18% Similarity=0.231 Sum_probs=87.5
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHH--H
Q 015029 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATA--C 80 (414)
Q Consensus 3 e~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~--~ 80 (414)
..+...|.+++..|+|++|+..|.+++..+|.++.+++++|.+|..+|++++|+.+|++++.++|.+..++..++.+ +
T Consensus 48 ~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~ 127 (166)
T 1a17_A 48 IYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKI 127 (166)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 45778899999999999999999999999999999999999999999999999999999999999999888555554 8
Q ss_pred HHcCChHHHHHHHHHHHH
Q 015029 81 MKLEEYETAKVALEKGAS 98 (414)
Q Consensus 81 ~~lg~y~~A~~~~~~a~~ 98 (414)
..+|++++|+..+.++..
T Consensus 128 ~~~~~~~~A~~~~~~~~~ 145 (166)
T 1a17_A 128 VKQKAFERAIAGDEHKRS 145 (166)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccchHH
Confidence 889999999999987654
No 118
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.15 E-value=2.6e-10 Score=104.97 Aligned_cols=130 Identities=20% Similarity=0.145 Sum_probs=110.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--------CCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHh--------
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEIS--------PNSAELFADRAQASIKLQNFTEAVADANRAIEL-------- 65 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~--------P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l-------- 65 (414)
+..+...|..++..|+|++|+.+|.+++.+. |....++.++|.+|..+|++++|+..|.+++.+
T Consensus 43 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 122 (283)
T 3edt_B 43 ATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKF 122 (283)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCC
Confidence 3457889999999999999999999999883 556789999999999999999999999999998
Q ss_pred CCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHHhhhhhhhhhHHHHH
Q 015029 66 EPSMSKAYWRKATACMKLEEYETAKVALEKGASL--------APGDSRFTNLIKEFVGLLMQNAVYLCWNYELL 131 (414)
Q Consensus 66 ~p~~~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l--------~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 131 (414)
+|....+++.+|.+|+.+|++++|...|++++.+ .|....+...++.+...++.-..+..+..+..
T Consensus 123 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l 196 (283)
T 3edt_B 123 HPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEIL 196 (283)
T ss_dssp CHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 4667889999999999999999999999999998 55555667777777766666555555554443
No 119
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.14 E-value=2.6e-10 Score=118.28 Aligned_cols=115 Identities=14% Similarity=0.055 Sum_probs=87.8
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHH
Q 015029 15 DDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALE 94 (414)
Q Consensus 15 ~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~lg~y~~A~~~~~ 94 (414)
.|++++|+..|.++++.+|++..++.++|.+|+.+|+|++|+..|+++++++|.+..+++.+|.+|..+|++++|..+|+
T Consensus 2 ~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~ 81 (568)
T 2vsy_A 2 TADGPRELLQLRAAVRHRPQDFVAWLMLADAELGMGDTTAGEMAVQRGLALHPGHPEAVARLGRVRWTQQRHAEAAVLLQ 81 (568)
T ss_dssp -------------------CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCCHHHHHHHHHHHHHHhhhhhhhhhHHH
Q 015029 95 KGASLAPGDSRFTNLIKEFVGLLMQNAVYLCWNYE 129 (414)
Q Consensus 95 ~a~~l~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 129 (414)
+++.++|++..+...++.+...++....+..+..+
T Consensus 82 ~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~ 116 (568)
T 2vsy_A 82 QASDAAPEHPGIALWLGHALEDAGQAEAAAAAYTR 116 (568)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 99999999999999998888776665555544433
No 120
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.14 E-value=3.4e-10 Score=107.45 Aligned_cols=103 Identities=16% Similarity=0.010 Sum_probs=78.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHc-cCHHHHHHHHHHHHHhCCCC-----
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS------AELFADRAQASIKL-QNFTEAVADANRAIELEPSM----- 69 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~------~~~~~~ra~~~~kl-~~~~~Al~~~~~Ai~l~p~~----- 69 (414)
+..+.+.|.++...|+|++|+.+|.+||.+.+.. +.++.++|.+|... |++++|+.+|++|+.+.|..
T Consensus 77 a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~ 156 (292)
T 1qqe_A 77 GNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVAL 156 (292)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHH
Confidence 3456677888888888888888888888876543 45777888888884 88888888888888877643
Q ss_pred -HHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCH
Q 015029 70 -SKAYWRKATACMKLEEYETAKVALEKGASLAPGDS 104 (414)
Q Consensus 70 -~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p~~~ 104 (414)
..++.++|.+|..+|+|++|+.+|++++.+.|.+.
T Consensus 157 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~ 192 (292)
T 1qqe_A 157 SNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNR 192 (292)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCT
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCC
Confidence 45677888888888888888888888888877654
No 121
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.13 E-value=4.4e-10 Score=89.16 Aligned_cols=72 Identities=19% Similarity=0.224 Sum_probs=67.1
Q ss_pred hCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCC
Q 015029 31 ISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPG 102 (414)
Q Consensus 31 ~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p~ 102 (414)
.+|+++.+++++|.+|+.+|+|++|+..|+++++++|.++.+|+.+|.+|..+|++++|+..|++++.+.|.
T Consensus 2 ~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~ 73 (100)
T 3ma5_A 2 EDPEDPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVARE 73 (100)
T ss_dssp ---CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred CCccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhc
Confidence 479999999999999999999999999999999999999999999999999999999999999999998764
No 122
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.13 E-value=2.4e-10 Score=94.93 Aligned_cols=92 Identities=20% Similarity=0.203 Sum_probs=75.5
Q ss_pred CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHH-------HH
Q 015029 35 SAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSR-------FT 107 (414)
Q Consensus 35 ~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p~~~~-------~~ 107 (414)
.+.++.++|.+|++.|+|++|+.+|++|+.++|.++.+|+++|.+|+.+|+|++|+.+|+++++++|.+.. +.
T Consensus 7 ~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~ 86 (127)
T 4gcn_A 7 AAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAKAM 86 (127)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHHHH
Confidence 35688899999999999999999999999999999999999999999999999999999999999887643 33
Q ss_pred HHHHHHHHHHhhhhhhhhh
Q 015029 108 NLIKEFVGLLMQNAVYLCW 126 (414)
Q Consensus 108 ~~l~~~~~~~~~~~~~~~~ 126 (414)
..++.+...++.-..+..+
T Consensus 87 ~~lg~~~~~~~~~~~A~~~ 105 (127)
T 4gcn_A 87 SRAGNAFQKQNDLSLAVQW 105 (127)
T ss_dssp HHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHH
Confidence 3344555444443333333
No 123
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.11 E-value=1e-09 Score=111.37 Aligned_cols=128 Identities=18% Similarity=0.174 Sum_probs=115.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~ 81 (414)
+..+...|..++..|++++|+..|.+++..+|+ ..++..+|.+|..+|++++|+..|++++.++|.++.+++.+|.++.
T Consensus 243 ~~~~~~~g~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 321 (537)
T 3fp2_A 243 ALALCYTGIFHFLKNNLLDAQVLLQESINLHPT-PNSYIFLALTLADKENSQEFFKFFQKAVDLNPEYPPTYYHRGQMYF 321 (537)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHTCCSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccHHHHHHHHHHHHhcCCC-chHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCHHHHHHHHHHHH
Confidence 345788899999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhhhhhhhhhHHHH
Q 015029 82 KLEEYETAKVALEKGASLAPGDSRFTNLIKEFVGLLMQNAVYLCWNYEL 130 (414)
Q Consensus 82 ~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 130 (414)
.+|+|++|...|++++.++|.+..+...++.+....+.-..+.......
T Consensus 322 ~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~ 370 (537)
T 3fp2_A 322 ILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYKQGKFTESEAFFNET 370 (537)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCSHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 9999999999999999999999988888888886666555555444443
No 124
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.11 E-value=1.8e-09 Score=89.19 Aligned_cols=100 Identities=15% Similarity=0.124 Sum_probs=88.2
Q ss_pred HhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHH
Q 015029 30 EISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNL 109 (414)
Q Consensus 30 ~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~ 109 (414)
..+|.++..++.+|.+++..|+|++|+..|.+++.++|.++.+++.+|.+++.+|+|++|+.+|++++.++|.+..+...
T Consensus 3 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 82 (137)
T 3q49_B 3 HMKSPSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFF 82 (137)
T ss_dssp ---CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred CCccccHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHH
Confidence 45678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhhhhhHHH
Q 015029 110 IKEFVGLLMQNAVYLCWNYE 129 (414)
Q Consensus 110 l~~~~~~~~~~~~~~~~~~~ 129 (414)
++.+...++.-..+......
T Consensus 83 l~~~~~~~~~~~~A~~~~~~ 102 (137)
T 3q49_B 83 LGQCQLEMESYDEAIANLQR 102 (137)
T ss_dssp HHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHHHH
Confidence 99988666665555444443
No 125
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.10 E-value=2e-09 Score=107.84 Aligned_cols=115 Identities=17% Similarity=0.087 Sum_probs=101.0
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh---------CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-------
Q 015029 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEI---------SPNSAELFADRAQASIKLQNFTEAVADANRAIELE------- 66 (414)
Q Consensus 3 e~~~~~g~~~~~~g~y~~Ai~~y~~AL~~---------~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~------- 66 (414)
..+...|.+++..|+|++|+.+|.+|+++ +|.....|.++|.+|..+|+|++|+.++++++.+.
T Consensus 52 ~~yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~ 131 (472)
T 4g1t_A 52 TMCNLLAYLKHLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSPY 131 (472)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCSS
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhccccc
Confidence 34567899999999999999999999987 67778899999999999999999999999999884
Q ss_pred -CCCHHHHHHHHHHHHHcC--ChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 015029 67 -PSMSKAYWRKATACMKLE--EYETAKVALEKGASLAPGDSRFTNLIKEFVGLL 117 (414)
Q Consensus 67 -p~~~~a~~~~g~~~~~lg--~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~ 117 (414)
+..+.++..+|.++..+| +|++|+.+|++++.++|+++.+...+..+...+
T Consensus 132 ~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~~~~~~~~~~~~~l 185 (472)
T 4g1t_A 132 RIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNPEFTSGLAIASYRL 185 (472)
T ss_dssp CCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHH
T ss_pred chhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Confidence 356889999998887765 699999999999999999999888877765444
No 126
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.10 E-value=2.2e-10 Score=108.73 Aligned_cols=104 Identities=17% Similarity=0.075 Sum_probs=89.2
Q ss_pred HHHHHHHHHHHHHc-CCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHH---
Q 015029 2 ATDLEKKAKEAFID-DYFELAYDLYSQAIEISPNS------AELFADRAQASIKLQNFTEAVADANRAIELEPSMSK--- 71 (414)
Q Consensus 2 Ae~~~~~g~~~~~~-g~y~~Ai~~y~~AL~~~P~~------~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~--- 71 (414)
+..+...|..+... |+|++|+.+|.+||.+.|.+ ..++.++|.+|..+|+|++|+.+|++++.+.|.+..
T Consensus 117 a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 196 (292)
T 1qqe_A 117 ANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQW 196 (292)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTGG
T ss_pred HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcccH
Confidence 34677889999996 99999999999999997754 568999999999999999999999999999987543
Q ss_pred ----HHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHH
Q 015029 72 ----AYWRKATACMKLEEYETAKVALEKGASLAPGDSR 105 (414)
Q Consensus 72 ----a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p~~~~ 105 (414)
+++++|.++..+|++++|+.+|++++.++|....
T Consensus 197 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~ 234 (292)
T 1qqe_A 197 SLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFAD 234 (292)
T ss_dssp GHHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC------
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCC
Confidence 6899999999999999999999999999998654
No 127
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.10 E-value=1e-09 Score=83.90 Aligned_cols=81 Identities=25% Similarity=0.364 Sum_probs=76.8
Q ss_pred CCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 015029 34 NSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKEF 113 (414)
Q Consensus 34 ~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~ 113 (414)
.++.+++.+|.+|+..++|++|+..|++++.++|.+..+++.+|.+++.+|++++|..+|++++.++|.+..+...++.+
T Consensus 7 ~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~ 86 (91)
T 1na3_A 7 NSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNA 86 (91)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999888888777
Q ss_pred H
Q 015029 114 V 114 (414)
Q Consensus 114 ~ 114 (414)
.
T Consensus 87 ~ 87 (91)
T 1na3_A 87 K 87 (91)
T ss_dssp H
T ss_pred H
Confidence 6
No 128
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.09 E-value=1.6e-09 Score=89.06 Aligned_cols=91 Identities=18% Similarity=0.085 Sum_probs=81.8
Q ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 015029 38 LFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKEFVGLL 117 (414)
Q Consensus 38 ~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~ 117 (414)
.++.+|.++++.|++++|+..|++++.++|.++.+|+.+|.++..+|++++|+.+|++++.++|++..+...++.+...+
T Consensus 19 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~~ 98 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNE 98 (121)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 46889999999999999999999999999999999999999999999999999999999999999999999999888666
Q ss_pred hhhhhhhhhHH
Q 015029 118 MQNAVYLCWNY 128 (414)
Q Consensus 118 ~~~~~~~~~~~ 128 (414)
+....+..+..
T Consensus 99 g~~~~A~~~~~ 109 (121)
T 1hxi_A 99 HNANAALASLR 109 (121)
T ss_dssp HHHHHHHHHHH
T ss_pred CCHHHHHHHHH
Confidence 66555444433
No 129
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.08 E-value=1e-09 Score=87.01 Aligned_cols=80 Identities=23% Similarity=0.233 Sum_probs=73.2
Q ss_pred CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCC------HHHHH
Q 015029 35 SAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGD------SRFTN 108 (414)
Q Consensus 35 ~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p~~------~~~~~ 108 (414)
++.++.++|.+++..|+|++|+..|++++.++|.++.+++.+|.+|+.+|+|++|+.+|++++.++|++ ..+..
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~ 82 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQY 82 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHHH
Confidence 467899999999999999999999999999999999999999999999999999999999999999998 55555
Q ss_pred HHHHHH
Q 015029 109 LIKEFV 114 (414)
Q Consensus 109 ~l~~~~ 114 (414)
.++.+.
T Consensus 83 ~~~~~~ 88 (111)
T 2l6j_A 83 RLELAQ 88 (111)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555555
No 130
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.07 E-value=3.6e-09 Score=109.04 Aligned_cols=126 Identities=12% Similarity=-0.013 Sum_probs=102.0
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Q 015029 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKL 83 (414)
Q Consensus 4 ~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~l 83 (414)
.+...|..++..|++++|+.+|.+++...|.+..++..++.+|.+.|++++|+..|++++.++|.+..+++.+|.+|...
T Consensus 375 ~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 454 (597)
T 2xpi_A 375 TWLAVGIYYLCVNKISEARRYFSKSSTMDPQFGPAWIGFAHSFAIEGEHDQAISAYTTAARLFQGTHLPYLFLGMQHMQL 454 (597)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHc
Confidence 45667888888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred CChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhhhhhhhhhHHH
Q 015029 84 EEYETAKVALEKGASLAPGDSRFTNLIKEFVGLLMQNAVYLCWNYE 129 (414)
Q Consensus 84 g~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 129 (414)
|++++|...|++++.++|.+......+..+....+.-..+.....+
T Consensus 455 g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~ 500 (597)
T 2xpi_A 455 GNILLANEYLQSSYALFQYDPLLLNELGVVAFNKSDMQTAINHFQN 500 (597)
T ss_dssp TCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 8888888888888888888887777777766555544444444333
No 131
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.06 E-value=4e-09 Score=108.70 Aligned_cols=95 Identities=13% Similarity=0.014 Sum_probs=47.5
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Q 015029 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLE 84 (414)
Q Consensus 5 ~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~lg 84 (414)
+...|..+...|++++|+.+|.+++...|++..++..+|.+|.+.|++++|+..|++++.++|.++.+|+.+|.+|...|
T Consensus 410 ~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 489 (597)
T 2xpi_A 410 WIGFAHSFAIEGEHDQAISAYTTAARLFQGTHLPYLFLGMQHMQLGNILLANEYLQSSYALFQYDPLLLNELGVVAFNKS 489 (597)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhC
Confidence 34444445555555555555555555555444445555555555555555555555555555544445555555555555
Q ss_pred ChHHHHHHHHHHHHh
Q 015029 85 EYETAKVALEKGASL 99 (414)
Q Consensus 85 ~y~~A~~~~~~a~~l 99 (414)
++++|...|++++.+
T Consensus 490 ~~~~A~~~~~~~~~~ 504 (597)
T 2xpi_A 490 DMQTAINHFQNALLL 504 (597)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHh
Confidence 555555555544444
No 132
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.06 E-value=7.2e-10 Score=87.39 Aligned_cols=87 Identities=20% Similarity=0.223 Sum_probs=81.0
Q ss_pred hCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCC--CHHHHH
Q 015029 31 ISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPG--DSRFTN 108 (414)
Q Consensus 31 ~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p~--~~~~~~ 108 (414)
++|+++.+++.+|.+++..|++++|+..|++++.++|.+..+++.+|.+++.+|+|++|..+|++++.++|. +..+..
T Consensus 1 l~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~ 80 (112)
T 2kck_A 1 MVDQNPEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWA 80 (112)
T ss_dssp CCCSSTTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHH
T ss_pred CCCCcHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHH
Confidence 368888999999999999999999999999999999999999999999999999999999999999999999 988888
Q ss_pred HHHHHHHHH
Q 015029 109 LIKEFVGLL 117 (414)
Q Consensus 109 ~l~~~~~~~ 117 (414)
.++.+...+
T Consensus 81 ~l~~~~~~~ 89 (112)
T 2kck_A 81 AKADALRYI 89 (112)
T ss_dssp HHHHHHTTC
T ss_pred HHHHHHHHH
Confidence 888877433
No 133
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.06 E-value=1.6e-09 Score=106.42 Aligned_cols=118 Identities=10% Similarity=0.135 Sum_probs=102.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH----HHHHHHHHHHHHccCHHHHHHHHHHHHHh------CCCCHH
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSA----ELFADRAQASIKLQNFTEAVADANRAIEL------EPSMSK 71 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~----~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l------~p~~~~ 71 (414)
+..+...|..++..|+|++|+.+|.+++...|++. .++..+|.+|+.+|++++|+.+|++++.+ .+....
T Consensus 48 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~ 127 (411)
T 4a1s_A 48 CLELALEGERLCNAGDCRAGVAFFQAAIQAGTEDLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLGEAK 127 (411)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHhcccChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchHHHH
Confidence 35678899999999999999999999999999986 58999999999999999999999999998 566788
Q ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHHhh
Q 015029 72 AYWRKATACMKLEEYETAKVALEKGASL------APGDSRFTNLIKEFVGLLMQ 119 (414)
Q Consensus 72 a~~~~g~~~~~lg~y~~A~~~~~~a~~l------~p~~~~~~~~l~~~~~~~~~ 119 (414)
+++.+|.+|+.+|+|++|..+|++++.+ .+....+...++.+...++.
T Consensus 128 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 181 (411)
T 4a1s_A 128 SSGNLGNTLKVMGRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHAKGK 181 (411)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHcCc
Confidence 9999999999999999999999999988 33344455556666655544
No 134
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.06 E-value=8.7e-10 Score=101.39 Aligned_cols=98 Identities=21% Similarity=0.199 Sum_probs=90.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHh--------
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEI--------SPNSAELFADRAQASIKLQNFTEAVADANRAIEL-------- 65 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~--------~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l-------- 65 (414)
+..+...|.+++..|++++|+.+|.+++.. +|....++.++|.+|..+|++++|+..|++++.+
T Consensus 85 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 164 (283)
T 3edt_B 85 AATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPD 164 (283)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCC
Confidence 345778999999999999999999999998 4667889999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHh
Q 015029 66 EPSMSKAYWRKATACMKLEEYETAKVALEKGASL 99 (414)
Q Consensus 66 ~p~~~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l 99 (414)
.|....+++.+|.+|..+|++++|...|++++.+
T Consensus 165 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~ 198 (283)
T 3edt_B 165 DPNVAKTKNNLASCYLKQGKYQDAETLYKEILTR 198 (283)
T ss_dssp CHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 6777889999999999999999999999999987
No 135
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.05 E-value=1.8e-09 Score=90.34 Aligned_cols=125 Identities=15% Similarity=0.129 Sum_probs=98.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC------
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS------AELFADRAQASIKLQNFTEAVADANRAIELEPSM------ 69 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~------~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~------ 69 (414)
+..+...|..++..|+|++|+.+|.+++.+.+.. ..++.++|.+|..+|++++|+..+++++.+.+..
T Consensus 9 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~ 88 (164)
T 3ro3_A 9 GRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVE 88 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHH
Confidence 4567889999999999999999999999985532 2589999999999999999999999999986542
Q ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCC--CH----HHHHHHHHHHHHHhhhhhhhhh
Q 015029 70 SKAYWRKATACMKLEEYETAKVALEKGASLAPG--DS----RFTNLIKEFVGLLMQNAVYLCW 126 (414)
Q Consensus 70 ~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p~--~~----~~~~~l~~~~~~~~~~~~~~~~ 126 (414)
..+++.+|.+++.+|++++|...|++++.+.+. +. .+...++.+...++....+..+
T Consensus 89 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~ 151 (164)
T 3ro3_A 89 AQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMHF 151 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHHccCHHHHHHH
Confidence 678999999999999999999999999887432 22 2344455555444443333333
No 136
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.05 E-value=8.2e-09 Score=95.95 Aligned_cols=109 Identities=11% Similarity=0.046 Sum_probs=93.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----ccCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIK----LQNFTEAVADANRAIELEPSMSKAYWRKA 77 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~k----l~~~~~Al~~~~~Ai~l~p~~~~a~~~~g 77 (414)
++.+...|..++..|++++|+.+|.++++ |+++.+++++|.+|.. .+++++|+..|++++.++ ++.+++.+|
T Consensus 6 ~~a~~~lg~~~~~~~~~~~A~~~~~~a~~--~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg 81 (273)
T 1ouv_A 6 PKELVGLGAKSYKEKDFTQAKKYFEKACD--LKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN--YSNGCHLLG 81 (273)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH--TTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC--CHHHHHHHH
Confidence 45678889999999999999999999988 7788899999999999 999999999999999886 788999999
Q ss_pred HHHHH----cCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 015029 78 TACMK----LEEYETAKVALEKGASLAPGDSRFTNLIKEFVGL 116 (414)
Q Consensus 78 ~~~~~----lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~ 116 (414)
.+|.. .+++++|+.+|++++.++ +..+...++.+...
T Consensus 82 ~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~ 122 (273)
T 1ouv_A 82 NLYYSGQGVSQNTNKALQYYSKACDLK--YAEGCASLGGIYHD 122 (273)
T ss_dssp HHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHH
T ss_pred HHHhCCCCcccCHHHHHHHHHHHHHcC--CccHHHHHHHHHHc
Confidence 99999 999999999999998874 67777777777644
No 137
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.04 E-value=2.1e-09 Score=86.85 Aligned_cols=84 Identities=24% Similarity=0.173 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 015029 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (414)
Q Consensus 3 e~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~ 82 (414)
..+...|.+++..|++++|+..|.+++...|+++.+++.+|.+|..+|++++|+.++++++.++|.+..+++.+|.++..
T Consensus 47 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~ 126 (131)
T 2vyi_A 47 VYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSNLKIAELK 126 (131)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCccchHHHHHHHHHHHH
Confidence 45678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCh
Q 015029 83 LEEY 86 (414)
Q Consensus 83 lg~y 86 (414)
+|++
T Consensus 127 ~~~~ 130 (131)
T 2vyi_A 127 LREA 130 (131)
T ss_dssp HTTC
T ss_pred HhcC
Confidence 9986
No 138
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.04 E-value=1.3e-09 Score=109.79 Aligned_cols=120 Identities=22% Similarity=0.189 Sum_probs=71.4
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHH------HHHHHHH
Q 015029 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSK------AYWRKAT 78 (414)
Q Consensus 5 ~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~------a~~~~g~ 78 (414)
+...|..++..|++++|+..|.+++...|+++.++..+|.+|..+|++++|+..+++++.++|.+.. +++.+|.
T Consensus 341 ~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~ 420 (514)
T 2gw1_A 341 YIQLACLAYRENKFDDCETLFSEAKRKFPEAPEVPNFFAEILTDKNDFDKALKQYDLAIELENKLDGIYVGIAPLVGKAT 420 (514)
T ss_dssp HHHHHHHTTTTTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSSSCSSCSHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHH
Confidence 4455556666666666666666666666666666666666666666666666666666666555433 6666666
Q ss_pred HHHH---cCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhhhhhhh
Q 015029 79 ACMK---LEEYETAKVALEKGASLAPGDSRFTNLIKEFVGLLMQNAVYL 124 (414)
Q Consensus 79 ~~~~---lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~~~~ 124 (414)
+++. +|++++|...|++++.++|.+..+...++.+....+....+.
T Consensus 421 ~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~ 469 (514)
T 2gw1_A 421 LLTRNPTVENFIEATNLLEKASKLDPRSEQAKIGLAQMKLQQEDIDEAI 469 (514)
T ss_dssp HHHTSCCTTHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHhhhhhcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhcCHHHHH
Confidence 6666 666666666666666666666655555555554444433333
No 139
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.02 E-value=3.9e-09 Score=100.74 Aligned_cols=121 Identities=10% Similarity=0.013 Sum_probs=97.1
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH-HHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 015029 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAE-LFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (414)
Q Consensus 3 e~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~-~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~ 81 (414)
..+...|..+...|++++|+..|+++|.+.|.++. +|.++|.++.+.|++++|+..|++|+.++|....+|+..+...+
T Consensus 100 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~a~~~~ 179 (308)
T 2ond_A 100 LLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEY 179 (308)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHhccccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 34667888888899999999999999999888876 88999999989999999999999999988888777776666644
Q ss_pred H-cCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhhhhhh
Q 015029 82 K-LEEYETAKVALEKGASLAPGDSRFTNLIKEFVGLLMQNAVY 123 (414)
Q Consensus 82 ~-lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~~~ 123 (414)
. +|++++|..+|++++.++|++..+...+..+...++....+
T Consensus 180 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~A 222 (308)
T 2ond_A 180 YCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNT 222 (308)
T ss_dssp HTSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCHHHH
T ss_pred HHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHH
Confidence 3 78999999999999999998887777766666444433333
No 140
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.01 E-value=1.6e-09 Score=96.28 Aligned_cols=95 Identities=16% Similarity=0.068 Sum_probs=83.3
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 015029 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (414)
Q Consensus 3 e~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~ 82 (414)
..+...|.+++..|+|++|+.+|.+++.++|+++.+++++|.+|+.+|+|++|+.+|++++.++|.+..++..++.++..
T Consensus 89 ~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 168 (198)
T 2fbn_A 89 SCNLNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCVNK 168 (198)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHH
Confidence 56788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCChHHHH-HHHHHHH
Q 015029 83 LEEYETAK-VALEKGA 97 (414)
Q Consensus 83 lg~y~~A~-~~~~~a~ 97 (414)
++++.++. ..|...+
T Consensus 169 ~~~~~~~~~~~~~~~f 184 (198)
T 2fbn_A 169 LKEARKKDKLTFGGMF 184 (198)
T ss_dssp HHHHHC----------
T ss_pred HHHHHHHHHHHHHHHh
Confidence 99998877 4444443
No 141
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.01 E-value=1.1e-09 Score=111.13 Aligned_cols=91 Identities=14% Similarity=0.149 Sum_probs=82.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~ 81 (414)
+..+.+.|.+++..|+|++|+.+|++||.++|+++.+|++||.+|+.+++|++|+.+|++|++++|++..++..++.++.
T Consensus 317 ~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~ 396 (457)
T 1kt0_A 317 LAAFLNLAMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQK 396 (457)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 35678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCChHHHHHH
Q 015029 82 KLEEYETAKVA 92 (414)
Q Consensus 82 ~lg~y~~A~~~ 92 (414)
.++++.+|...
T Consensus 397 ~~~~~~~a~~~ 407 (457)
T 1kt0_A 397 KAKEHNERDRR 407 (457)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999988754
No 142
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.00 E-value=3.8e-09 Score=99.11 Aligned_cols=118 Identities=10% Similarity=0.149 Sum_probs=99.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC----HHHHHHHHHHHHHccCHHHHHHHHHHHHHh------CCCCHH
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS----AELFADRAQASIKLQNFTEAVADANRAIEL------EPSMSK 71 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~----~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l------~p~~~~ 71 (414)
+..+...|..++..|+|++|+.+|.+++...|.+ ..++..+|.+|+.+|++++|+..+++++.+ .+....
T Consensus 5 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~ 84 (338)
T 3ro2_A 5 CLELALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAK 84 (338)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccccHHHHH
Confidence 3567889999999999999999999999999998 478899999999999999999999999988 345678
Q ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCH------HHHHHHHHHHHHHhh
Q 015029 72 AYWRKATACMKLEEYETAKVALEKGASLAPGDS------RFTNLIKEFVGLLMQ 119 (414)
Q Consensus 72 a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p~~~------~~~~~l~~~~~~~~~ 119 (414)
+++.+|.+|+.+|+|++|...|++++.+.+... .+...++.+...++.
T Consensus 85 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 138 (338)
T 3ro2_A 85 ASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGK 138 (338)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHcCc
Confidence 999999999999999999999999998865432 144445555544443
No 143
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.00 E-value=2.4e-09 Score=104.91 Aligned_cols=128 Identities=14% Similarity=0.106 Sum_probs=102.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-------CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC-----
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPN-------SAELFADRAQASIKLQNFTEAVADANRAIELEPSM----- 69 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~-------~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~----- 69 (414)
+..+...|..++..|++++|+.+|.+|+.+.+. .+.++.++|.+|..+|+|++|+..|++|+.+.+..
T Consensus 143 a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 222 (383)
T 3ulq_A 143 AEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQL 222 (383)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHH
Confidence 456788899999999999999999999987433 25688999999999999999999999999885532
Q ss_pred -HHHHHHHHHHHHHcCChHHHHHHHHHHHHh-----C-CCCHHHHHHHHHHHHHHhhhhhhhhhHHH
Q 015029 70 -SKAYWRKATACMKLEEYETAKVALEKGASL-----A-PGDSRFTNLIKEFVGLLMQNAVYLCWNYE 129 (414)
Q Consensus 70 -~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l-----~-p~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 129 (414)
..+++++|.+|..+|+|++|+.+|++++.+ + |....+...++.+...++.-..+..+..+
T Consensus 223 ~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~ 289 (383)
T 3ulq_A 223 MGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKIDKAHEYHSK 289 (383)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 358899999999999999999999999984 5 65666677777777666665555554444
No 144
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.99 E-value=3.5e-09 Score=102.97 Aligned_cols=118 Identities=10% Similarity=0.145 Sum_probs=100.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC----HHHHHHHHHHHHHccCHHHHHHHHHHHHHhC------CCCHH
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS----AELFADRAQASIKLQNFTEAVADANRAIELE------PSMSK 71 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~----~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~------p~~~~ 71 (414)
+..+...|..++..|+|++|+.+|++++...|.+ ..++..+|.+|+.+|+|++|+..|++++.+. +....
T Consensus 9 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~ 88 (406)
T 3sf4_A 9 CLELALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAK 88 (406)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccccHHHHH
Confidence 5678899999999999999999999999999998 4689999999999999999999999999883 44578
Q ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHhh
Q 015029 72 AYWRKATACMKLEEYETAKVALEKGASLAPGD------SRFTNLIKEFVGLLMQ 119 (414)
Q Consensus 72 a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p~~------~~~~~~l~~~~~~~~~ 119 (414)
+++.+|.+|..+|++++|..+|++++.+.+.. ..+...++.+....+.
T Consensus 89 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 142 (406)
T 3sf4_A 89 ASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGK 142 (406)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999887642 2244455555544444
No 145
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=98.98 E-value=1.8e-09 Score=92.76 Aligned_cols=86 Identities=13% Similarity=0.051 Sum_probs=77.5
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCH-HHHHHHHHHHH
Q 015029 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMS-KAYWRKATACM 81 (414)
Q Consensus 3 e~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~-~a~~~~g~~~~ 81 (414)
..+.+.|.+++..|+|++|+..|+++|.++|+++.+|+.+|.+|+.+|+|++|+.+|++++.++|.+. .+...++.+..
T Consensus 64 ~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~~ 143 (162)
T 3rkv_A 64 PLYANMSQCYLNIGDLHEAEETSSEVLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAREMKIVTE 143 (162)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCcHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 45788999999999999999999999999999999999999999999999999999999999999998 66777777776
Q ss_pred HcCChHH
Q 015029 82 KLEEYET 88 (414)
Q Consensus 82 ~lg~y~~ 88 (414)
.++++.+
T Consensus 144 ~~~~~~~ 150 (162)
T 3rkv_A 144 RRAEKKA 150 (162)
T ss_dssp HHHHHTT
T ss_pred HHHHHHH
Confidence 6655443
No 146
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=98.97 E-value=5.5e-09 Score=90.43 Aligned_cols=94 Identities=18% Similarity=0.091 Sum_probs=81.3
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-------CHH-----HHHHHHHHHHHcCChHHHHHHHHHHHHh----
Q 015029 36 AELFADRAQASIKLQNFTEAVADANRAIELEPS-------MSK-----AYWRKATACMKLEEYETAKVALEKGASL---- 99 (414)
Q Consensus 36 ~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~-------~~~-----a~~~~g~~~~~lg~y~~A~~~~~~a~~l---- 99 (414)
+..+.++|.+++++|+|++|+.+|++||+++|. +.. +|+++|.++..+|+|++|+.+|.+++++
T Consensus 11 a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~ 90 (159)
T 2hr2_A 11 AYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRR 90 (159)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhcc
Confidence 457899999999999999999999999999998 544 9999999999999999999999999999
Q ss_pred ---CCCCHHHH----HHHHHHHHHHhhhhhhhhhHHH
Q 015029 100 ---APGDSRFT----NLIKEFVGLLMQNAVYLCWNYE 129 (414)
Q Consensus 100 ---~p~~~~~~----~~l~~~~~~~~~~~~~~~~~~~ 129 (414)
+|++..+. ..++.+...++.-..+.....+
T Consensus 91 ~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~k 127 (159)
T 2hr2_A 91 GELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKK 127 (159)
T ss_dssp CCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred ccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHH
Confidence 99998888 7788877666665555544333
No 147
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=98.97 E-value=3.2e-09 Score=99.26 Aligned_cols=129 Identities=20% Similarity=0.169 Sum_probs=107.5
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC--------
Q 015029 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEI--------SPNSAELFADRAQASIKLQNFTEAVADANRAIELE-------- 66 (414)
Q Consensus 3 e~~~~~g~~~~~~g~y~~Ai~~y~~AL~~--------~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~-------- 66 (414)
..+...|..++..|++++|+.+|.+++.. .|....++.++|.+|..+|++++|+..|.+++.+.
T Consensus 70 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~ 149 (311)
T 3nf1_A 70 TMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDH 149 (311)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCC
Confidence 45678999999999999999999999988 35567899999999999999999999999999984
Q ss_pred CCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHHhhhhhhhhhHHHHH
Q 015029 67 PSMSKAYWRKATACMKLEEYETAKVALEKGASL--------APGDSRFTNLIKEFVGLLMQNAVYLCWNYELL 131 (414)
Q Consensus 67 p~~~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l--------~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 131 (414)
+....+++.+|.+|..+|++++|+.+|++++.+ .|....+...++.+...++.-..+..+..+..
T Consensus 150 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al 222 (311)
T 3nf1_A 150 PDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEIL 222 (311)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 556789999999999999999999999999998 55555566667777766666555555544433
No 148
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=98.97 E-value=3.9e-10 Score=109.81 Aligned_cols=102 Identities=11% Similarity=-0.002 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-H
Q 015029 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM-K 82 (414)
Q Consensus 4 ~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~-~ 82 (414)
.+.+.|.+++..|+|++|+.+|+++|.++|++..+|+++|.+|+.+|+|++|+.+|++|+.++|.+..++..++.+.. .
T Consensus 232 ~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~~ 311 (338)
T 2if4_A 232 CHLNIAACLIKLKRYDEAIGHCNIVLTEEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQE 311 (338)
T ss_dssp HHHHHHHHHHTTTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC-------------------
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
Confidence 567899999999999999999999999999999999999999999999999999999999999999999999999944 5
Q ss_pred cCChHHHHHHHHHHHHhCCCCHH
Q 015029 83 LEEYETAKVALEKGASLAPGDSR 105 (414)
Q Consensus 83 lg~y~~A~~~~~~a~~l~p~~~~ 105 (414)
.+.++.+...|.+++.+.|.++.
T Consensus 312 ~~~~~~a~~~~~~~l~~~p~~~~ 334 (338)
T 2if4_A 312 KALYQKQKEMYKGIFKGKDEGGA 334 (338)
T ss_dssp -----------------------
T ss_pred HHHHHHHHHHHHHhhCCCCCCCC
Confidence 66788889999999999998764
No 149
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.97 E-value=6.5e-09 Score=88.99 Aligned_cols=99 Identities=10% Similarity=0.033 Sum_probs=90.4
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcc---CHHHHHHHHHHHHHhC-C-CCHHHHHHHHHHHHHcCChHHHHH
Q 015029 17 YFELAYDLYSQAIEISPNSAELFADRAQASIKLQ---NFTEAVADANRAIELE-P-SMSKAYWRKATACMKLEEYETAKV 91 (414)
Q Consensus 17 ~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~---~~~~Al~~~~~Ai~l~-p-~~~~a~~~~g~~~~~lg~y~~A~~ 91 (414)
....+.+.|.+.+..++.+..+.+++|.|+.+.+ ++++|+..++.+++.+ | ...+++|++|++|+++|+|++|+.
T Consensus 13 ~l~~~~~~y~~e~~~~~~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A~~ 92 (152)
T 1pc2_A 13 DLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALK 92 (152)
T ss_dssp HHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHHHH
T ss_pred HHHHHHHHHHHHHccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHHHH
Confidence 3456778899999989999999999999999988 7779999999999999 7 578999999999999999999999
Q ss_pred HHHHHHHhCCCCHHHHHHHHHHHH
Q 015029 92 ALEKGASLAPGDSRFTNLIKEFVG 115 (414)
Q Consensus 92 ~~~~a~~l~p~~~~~~~~l~~~~~ 115 (414)
+|+++++++|+|.++......++.
T Consensus 93 y~~~lL~ieP~n~QA~~Lk~~ie~ 116 (152)
T 1pc2_A 93 YVRGLLQTEPQNNQAKELERLIDK 116 (152)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHH
Confidence 999999999999999888877773
No 150
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=98.97 E-value=3.3e-09 Score=86.35 Aligned_cols=83 Identities=18% Similarity=0.159 Sum_probs=79.2
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 015029 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (414)
Q Consensus 3 e~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~ 82 (414)
..+...|.+++..|++++|+..|.+++..+|.++.+++++|.+|+.+|++++|+..|++++.++|.+..+++.++.+++.
T Consensus 51 ~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~ 130 (133)
T 2lni_A 51 KLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAADGYQRCMMA 130 (133)
T ss_dssp HHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH
Confidence 45778899999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCC
Q 015029 83 LEE 85 (414)
Q Consensus 83 lg~ 85 (414)
+|+
T Consensus 131 ~~~ 133 (133)
T 2lni_A 131 QYN 133 (133)
T ss_dssp HTC
T ss_pred hcC
Confidence 875
No 151
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=98.96 E-value=5.6e-09 Score=84.75 Aligned_cols=83 Identities=11% Similarity=-0.026 Sum_probs=73.2
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 015029 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (414)
Q Consensus 3 e~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~ 82 (414)
..+...|.+++..|+|++|+..|.++++++|+++.+++++|.+|..+|++++|+..+++++.+.|.++........+.+.
T Consensus 28 ~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~ai~~~ 107 (117)
T 3k9i_A 28 ECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQGVELLLKIIAETSDDETIQSYKQAILFY 107 (117)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHTHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Confidence 46788999999999999999999999999999999999999999999999999999999999999998776544444444
Q ss_pred cCC
Q 015029 83 LEE 85 (414)
Q Consensus 83 lg~ 85 (414)
.+.
T Consensus 108 ~~~ 110 (117)
T 3k9i_A 108 ADK 110 (117)
T ss_dssp TTC
T ss_pred HHH
Confidence 333
No 152
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=98.94 E-value=7.7e-10 Score=112.97 Aligned_cols=101 Identities=17% Similarity=0.236 Sum_probs=90.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHH--
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATA-- 79 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~-- 79 (414)
+..+...|.+++..|+|++|+..|.+|++++|+++.+++++|.+|..+|+|++|+.+|++|++++|.+..+++.++.+
T Consensus 40 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~l~~~~~ 119 (477)
T 1wao_1 40 AIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNK 119 (477)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 456788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHH-----------HHHHhCCC
Q 015029 80 CMKLEEYETAKVALE-----------KGASLAPG 102 (414)
Q Consensus 80 ~~~lg~y~~A~~~~~-----------~a~~l~p~ 102 (414)
+..+|+|++|+..++ +++.++|+
T Consensus 120 ~~~~g~~~~A~~~~~~~~~~~~~~~~~al~~~~~ 153 (477)
T 1wao_1 120 IVKQKAFERAIAGDEHKRSVVDSLDIESMTIEDE 153 (477)
T ss_dssp HHHHHHHCCC------CCSTTTCCTTSSCCCCTT
T ss_pred HHHHHHHHHHhccccccchhHhhhhhhhcccccc
Confidence 899999999999999 77777665
No 153
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=98.94 E-value=4.4e-09 Score=98.34 Aligned_cols=127 Identities=15% Similarity=0.122 Sum_probs=102.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHh--------
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEI--------SPNSAELFADRAQASIKLQNFTEAVADANRAIEL-------- 65 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~--------~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l-------- 65 (414)
++.+...|..++..|+|++|+.+|.+++.+ .|....++..+|.+|..+|++++|+..+++++.+
T Consensus 27 ~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 106 (311)
T 3nf1_A 27 LRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKD 106 (311)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCC
Confidence 456788999999999999999999999995 5667889999999999999999999999999998
Q ss_pred CCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhC-----CCCH---HHHHHHHHHHHHHhhhhhhhhhHH
Q 015029 66 EPSMSKAYWRKATACMKLEEYETAKVALEKGASLA-----PGDS---RFTNLIKEFVGLLMQNAVYLCWNY 128 (414)
Q Consensus 66 ~p~~~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l~-----p~~~---~~~~~l~~~~~~~~~~~~~~~~~~ 128 (414)
.+....+++.+|.+|..+|++++|..+|++++.+. +.++ .+...++.+....+.-..+..+..
T Consensus 107 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~ 177 (311)
T 3nf1_A 107 HPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQ 177 (311)
T ss_dssp CHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 35567899999999999999999999999999884 3333 344445555544444333333333
No 154
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.93 E-value=2.4e-08 Score=94.37 Aligned_cols=119 Identities=10% Similarity=-0.033 Sum_probs=93.1
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHccCHHHHHHHHHHHH---HhCCCC----HH
Q 015029 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPNS------AELFADRAQASIKLQNFTEAVADANRAI---ELEPSM----SK 71 (414)
Q Consensus 5 ~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~------~~~~~~ra~~~~kl~~~~~Al~~~~~Ai---~l~p~~----~~ 71 (414)
+...|..+...|+|++|+.+|.+|+...+.. ..++.++|.+|..+|+|++|+..|++|+ ...+.. ..
T Consensus 118 ~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~ 197 (293)
T 2qfc_A 118 QYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVK 197 (293)
T ss_dssp HHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHH
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHH
Confidence 3456777788889999999999999875543 5688999999999999999999999999 445553 26
Q ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHhhhhhh
Q 015029 72 AYWRKATACMKLEEYETAKVALEKGASLAPGD------SRFTNLIKEFVGLLMQNAVY 123 (414)
Q Consensus 72 a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p~~------~~~~~~l~~~~~~~~~~~~~ 123 (414)
+++++|.+|+.+|+|++|+.+|++++.+.+.. ..+...++.+...++....+
T Consensus 198 ~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A 255 (293)
T 2qfc_A 198 VRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAE 255 (293)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCSSHHHHHHHHHHHHHHTTCCHHH
T ss_pred HHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHcCCcHHH
Confidence 88999999999999999999999998875321 44566677777666555555
No 155
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.93 E-value=5e-08 Score=90.57 Aligned_cols=107 Identities=11% Similarity=0.098 Sum_probs=84.2
Q ss_pred HHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----ccCHHHHHHHHHHHHHhCCCCHHHHH
Q 015029 3 TDLEKKAKEAFI----DDYFELAYDLYSQAIEISPNSAELFADRAQASIK----LQNFTEAVADANRAIELEPSMSKAYW 74 (414)
Q Consensus 3 e~~~~~g~~~~~----~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~k----l~~~~~Al~~~~~Ai~l~p~~~~a~~ 74 (414)
..+...|..++. .+++++|+.+|.++++.. ++.+++++|.+|.. .+++++|+..|++|+.++ ++.+++
T Consensus 39 ~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~ 114 (273)
T 1ouv_A 39 SGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN--YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLK--YAEGCA 114 (273)
T ss_dssp HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHH
T ss_pred HHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC--CHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHcC--CccHHH
Confidence 456677888888 888888888888888875 67888888888888 888888888888888874 778888
Q ss_pred HHHHHHHH----cCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 015029 75 RKATACMK----LEEYETAKVALEKGASLAPGDSRFTNLIKEFVG 115 (414)
Q Consensus 75 ~~g~~~~~----lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~ 115 (414)
.+|.+|.. .+++++|+.+|++++.++ +......++.+..
T Consensus 115 ~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~ 157 (273)
T 1ouv_A 115 SLGGIYHDGKVVTRDFKKAVEYFTKACDLN--DGDGCTILGSLYD 157 (273)
T ss_dssp HHHHHHHHCSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCcccCHHHHHHHHHHHHhcC--cHHHHHHHHHHHH
Confidence 88888888 888888888888888776 4555555665553
No 156
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.92 E-value=5.2e-09 Score=92.00 Aligned_cols=126 Identities=13% Similarity=-0.013 Sum_probs=98.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHh---CC----C
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEI------SPNSAELFADRAQASIKLQNFTEAVADANRAIEL---EP----S 68 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~------~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l---~p----~ 68 (414)
+..+...|..++..|+|++|+.+|.+++.+ .+....++.++|.+|..+|++++|+..+.+++.+ .+ .
T Consensus 26 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 105 (203)
T 3gw4_A 26 SGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPLA 105 (203)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHH
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHHH
Confidence 356778999999999999999999999994 3445788999999999999999999999999998 33 2
Q ss_pred CHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCC--CCHH----HHHHHHHHHHHHhhhhhhhhhH
Q 015029 69 MSKAYWRKATACMKLEEYETAKVALEKGASLAP--GDSR----FTNLIKEFVGLLMQNAVYLCWN 127 (414)
Q Consensus 69 ~~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p--~~~~----~~~~l~~~~~~~~~~~~~~~~~ 127 (414)
...+++.+|.++..+|++++|...|++++.+.+ .+.. +...++.+...++.......+.
T Consensus 106 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~ 170 (203)
T 3gw4_A 106 ASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQEKNLLEAQQHW 170 (203)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHCcCHHHHHHHH
Confidence 456899999999999999999999999987643 2332 2244555554444444444333
No 157
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=98.92 E-value=9.6e-09 Score=80.20 Aligned_cols=69 Identities=17% Similarity=0.260 Sum_probs=66.2
Q ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHH-HHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHH
Q 015029 39 FADRAQASIKLQNFTEAVADANRAIELEPSMSK-AYWRKATACMKLEEYETAKVALEKGASLAPGDSRFT 107 (414)
Q Consensus 39 ~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~-a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~ 107 (414)
.+++|.+++..|+|++|+..|++++.++|.+.. +++.+|.+|+.+|++++|+.+|++++.++|++..+.
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 72 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQ 72 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHH
Confidence 467899999999999999999999999999999 999999999999999999999999999999998876
No 158
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.92 E-value=2.9e-09 Score=100.80 Aligned_cols=96 Identities=19% Similarity=0.232 Sum_probs=74.1
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHh---CCCC----HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC------H
Q 015029 4 DLEKKAKEAFIDDYFELAYDLYSQAIEI---SPNS----AELFADRAQASIKLQNFTEAVADANRAIELEPSM------S 70 (414)
Q Consensus 4 ~~~~~g~~~~~~g~y~~Ai~~y~~AL~~---~P~~----~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~------~ 70 (414)
.+...|.+++..|+|++|+.+|.+||.. .|.+ ..+++++|.+|.++|+|++|+..+++|+.+.+.. .
T Consensus 157 ~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~~~~ 236 (293)
T 3u3w_A 157 IENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIG 236 (293)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCTTHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHH
Confidence 4677888888888888888888888853 1122 4577888888888888888888888888876432 7
Q ss_pred HHHHHHHHHHHHcCC-hHHHHHHHHHHHHh
Q 015029 71 KAYWRKATACMKLEE-YETAKVALEKGASL 99 (414)
Q Consensus 71 ~a~~~~g~~~~~lg~-y~~A~~~~~~a~~l 99 (414)
.+|+++|.+|+.+|+ |++|..+|++++.+
T Consensus 237 ~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i 266 (293)
T 3u3w_A 237 QLYYQRGECLRKLEYEEAEIEDAYKKASFF 266 (293)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCcHHHHHHHHHHHHHH
Confidence 788888888888884 68888888887754
No 159
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.91 E-value=4.8e-09 Score=99.24 Aligned_cols=125 Identities=10% Similarity=-0.072 Sum_probs=98.5
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-------CCCHHH
Q 015029 6 EKKAKEAFIDDYFELAYDLYSQAIEISPNS------AELFADRAQASIKLQNFTEAVADANRAIELE-------PSMSKA 72 (414)
Q Consensus 6 ~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~------~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~-------p~~~~a 72 (414)
...|..++..++|++|+.+|.+|+.+.+.. ..++.++|.+|..+|+|++|+..|++|+.+. +....+
T Consensus 119 ~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 198 (293)
T 3u3w_A 119 YYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKV 198 (293)
T ss_dssp HHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHH
T ss_pred HHHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHH
Confidence 347888888889999999999999964432 4479999999999999999999999999642 124568
Q ss_pred HHHHHHHHHHcCChHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHhhh-hhhhhhHHHH
Q 015029 73 YWRKATACMKLEEYETAKVALEKGASLAPGD------SRFTNLIKEFVGLLMQN-AVYLCWNYEL 130 (414)
Q Consensus 73 ~~~~g~~~~~lg~y~~A~~~~~~a~~l~p~~------~~~~~~l~~~~~~~~~~-~~~~~~~~~~ 130 (414)
++++|.+|+.+|+|++|+.+|++++.+.+.. ..+...++.+...+++. ..+..+..+.
T Consensus 199 ~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~A 263 (293)
T 3u3w_A 199 RYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKA 263 (293)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHH
Confidence 9999999999999999999999999886543 55777788888666643 5555544443
No 160
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.91 E-value=7.4e-09 Score=97.91 Aligned_cols=99 Identities=20% Similarity=0.235 Sum_probs=87.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHH---HhCCCCH----HHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC------
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAI---EISPNSA----ELFADRAQASIKLQNFTEAVADANRAIELEPS------ 68 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL---~~~P~~~----~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~------ 68 (414)
+..+...|..++..|+|++|+.+|.+|+ +..|++. .+++++|.+|..+|+|++|+.++++|+.+.+.
T Consensus 155 ~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~~~ 234 (293)
T 2qfc_A 155 LYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMAL 234 (293)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCSS
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcHHH
Confidence 3467789999999999999999999999 5566643 68999999999999999999999999988643
Q ss_pred CHHHHHHHHHHHHHcCChHHH-HHHHHHHHHhC
Q 015029 69 MSKAYWRKATACMKLEEYETA-KVALEKGASLA 100 (414)
Q Consensus 69 ~~~a~~~~g~~~~~lg~y~~A-~~~~~~a~~l~ 100 (414)
...+|+++|.+|..+|++++| ..+|++++.+.
T Consensus 235 ~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~~~ 267 (293)
T 2qfc_A 235 IGQLYYQRGECLRKLEYEEAEIEDAYKKASFFF 267 (293)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHH
Confidence 378999999999999999999 78899988654
No 161
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=98.91 E-value=1.7e-08 Score=96.13 Aligned_cols=106 Identities=13% Similarity=0.092 Sum_probs=94.4
Q ss_pred HHHHHHHHHHH-------HcCCH-------HHHHHHHHHHHH-hCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC
Q 015029 3 TDLEKKAKEAF-------IDDYF-------ELAYDLYSQAIE-ISPNSAELFADRAQASIKLQNFTEAVADANRAIELEP 67 (414)
Q Consensus 3 e~~~~~g~~~~-------~~g~y-------~~Ai~~y~~AL~-~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p 67 (414)
+.+...|..+. ..|++ ++|+..|.+||. +.|++..+|.++|.++..+|++++|+..|++++.++|
T Consensus 51 ~~w~~~~~~~~~~~~~l~~~g~~~~~~~~~~~A~~~~~rAl~~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p 130 (308)
T 2ond_A 51 DIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIED 130 (308)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHTTTTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSSS
T ss_pred HHHHHHHHHHHHhchhhhhccchhhcccchHHHHHHHHHHHHHhCcccHHHHHHHHHHHHhcCCHHHHHHHHHHHHhccc
Confidence 34556666665 35885 999999999999 7999999999999999999999999999999999999
Q ss_pred CCHH-HHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHH
Q 015029 68 SMSK-AYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTN 108 (414)
Q Consensus 68 ~~~~-a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~ 108 (414)
.++. +|+.+|.++...|++++|...|+++++++|.+..+..
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~ 172 (308)
T 2ond_A 131 IDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYV 172 (308)
T ss_dssp SCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHH
T ss_pred cCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHH
Confidence 9886 9999999999999999999999999999998765443
No 162
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=98.90 E-value=2.9e-08 Score=78.59 Aligned_cols=93 Identities=16% Similarity=0.135 Sum_probs=82.5
Q ss_pred CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 015029 35 SAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKEFV 114 (414)
Q Consensus 35 ~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~ 114 (414)
.+..++.+|.+++..|++++|+..|++++.++|.++.+++.+|.+++.+|+|++|...|++++.++|.+..+...++.+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~ 82 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAAL 82 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHHH
Confidence 35788999999999999999999999999999999999999999999999999999999999999999999888888888
Q ss_pred HHHhhhhhhhhhH
Q 015029 115 GLLMQNAVYLCWN 127 (414)
Q Consensus 115 ~~~~~~~~~~~~~ 127 (414)
..++.-..+..+.
T Consensus 83 ~~~~~~~~A~~~~ 95 (118)
T 1elw_A 83 EFLNRFEEAKRTY 95 (118)
T ss_dssp HHTTCHHHHHHHH
T ss_pred HHHhhHHHHHHHH
Confidence 6555544444333
No 163
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.90 E-value=4.1e-09 Score=100.66 Aligned_cols=99 Identities=22% Similarity=0.248 Sum_probs=70.4
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC------H
Q 015029 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS------AELFADRAQASIKLQNFTEAVADANRAIELEPSM------S 70 (414)
Q Consensus 3 e~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~------~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~------~ 70 (414)
..+...|.++.. |+|++|+.+|.+||.+.+.. ..++.++|.+|..+|+|++|+.+|++++.+.+.+ .
T Consensus 117 ~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 195 (307)
T 2ifu_A 117 MALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMENYPTCY 195 (307)
T ss_dssp HHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChhHHH
Confidence 345566777766 77777777777777765543 4667777777777777777777777777775432 3
Q ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCC
Q 015029 71 KAYWRKATACMKLEEYETAKVALEKGASLAPGD 103 (414)
Q Consensus 71 ~a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p~~ 103 (414)
.+++.+|.++..+|++++|..+|++++ ++|..
T Consensus 196 ~~~~~~g~~~~~~g~~~~A~~~~~~al-~~p~~ 227 (307)
T 2ifu_A 196 KKCIAQVLVQLHRADYVAAQKCVRESY-SIPGF 227 (307)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHT-TSTTS
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHh-CCCCC
Confidence 467777777777777777777777777 77754
No 164
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=98.89 E-value=7.7e-09 Score=102.06 Aligned_cols=90 Identities=20% Similarity=0.194 Sum_probs=85.7
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 015029 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (414)
Q Consensus 3 e~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~ 82 (414)
..+.+.|.+++..|+|++|+.+|++||+++|+++.+++++|.+|+.+++|++|+.+|++|++++|.+..++..++.++..
T Consensus 274 ~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~~~~ 353 (370)
T 1ihg_A 274 SCVLNIGACKLKMSDWQGAVDSCLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKVKQK 353 (370)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 45778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCChHHHHHH
Q 015029 83 LEEYETAKVA 92 (414)
Q Consensus 83 lg~y~~A~~~ 92 (414)
++++++|...
T Consensus 354 ~~~~~~a~k~ 363 (370)
T 1ihg_A 354 IKAQKDKEKA 363 (370)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHHH
Confidence 9999888653
No 165
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=98.89 E-value=1.6e-08 Score=82.36 Aligned_cols=96 Identities=11% Similarity=-0.055 Sum_probs=84.0
Q ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCH---HHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCC---HHHHHHH
Q 015029 37 ELFADRAQASIKLQNFTEAVADANRAIELEPSMS---KAYWRKATACMKLEEYETAKVALEKGASLAPGD---SRFTNLI 110 (414)
Q Consensus 37 ~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~---~a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p~~---~~~~~~l 110 (414)
.+++.+|.+++..|+|++|+..|++++..+|.+. .+++.+|.+++.+|+|++|+..|++++.++|++ ..+...+
T Consensus 3 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~l 82 (129)
T 2xev_A 3 RTAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKL 82 (129)
T ss_dssp CCHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHH
Confidence 3578899999999999999999999999999987 899999999999999999999999999999999 7888888
Q ss_pred HHHHHHHhhhhhhhhhHHHHHh
Q 015029 111 KEFVGLLMQNAVYLCWNYELLR 132 (414)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~ 132 (414)
+.+...++....+..+......
T Consensus 83 a~~~~~~g~~~~A~~~~~~~~~ 104 (129)
T 2xev_A 83 GLSQYGEGKNTEAQQTLQQVAT 104 (129)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHH
Confidence 8888766666666555555443
No 166
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.89 E-value=7.3e-09 Score=81.98 Aligned_cols=84 Identities=18% Similarity=0.179 Sum_probs=71.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC--CHHHHHHHHHH
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPS--MSKAYWRKATA 79 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~--~~~a~~~~g~~ 79 (414)
+..+...|.+++..|+|++|+..|.++++++|+++.+++++|.+|..+|++++|+..|++++.+.|. +..+...+..+
T Consensus 7 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~l~~~ 86 (100)
T 3ma5_A 7 PFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQKDLSELQDA 86 (100)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCchhHHHHHHHH
Confidence 4567899999999999999999999999999999999999999999999999999999999999764 44455555555
Q ss_pred HHHcCC
Q 015029 80 CMKLEE 85 (414)
Q Consensus 80 ~~~lg~ 85 (414)
+...+.
T Consensus 87 l~~~~~ 92 (100)
T 3ma5_A 87 KLKAEG 92 (100)
T ss_dssp HHHHHT
T ss_pred HHHccc
Confidence 544433
No 167
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.89 E-value=1.4e-08 Score=99.45 Aligned_cols=132 Identities=14% Similarity=0.010 Sum_probs=94.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-------CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC------C
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPN-------SAELFADRAQASIKLQNFTEAVADANRAIELEP------S 68 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~-------~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p------~ 68 (414)
+..+...|..++..|+++.|+.+|.+|+.+.+. .+.++.++|.+|..+|+|++|+..|.+|+.+.+ .
T Consensus 141 a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~ 220 (378)
T 3q15_A 141 AEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRF 220 (378)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHH
Confidence 345667788888888888888888888876432 245777888888888888888888888887643 1
Q ss_pred CHHHHHHHHHHHHHcCChHHHHHHHHHHHH-----hCCCCHHHHHHHHHHHHHHhhhhhhhhhHHHHHhh
Q 015029 69 MSKAYWRKATACMKLEEYETAKVALEKGAS-----LAPGDSRFTNLIKEFVGLLMQNAVYLCWNYELLRR 133 (414)
Q Consensus 69 ~~~a~~~~g~~~~~lg~y~~A~~~~~~a~~-----l~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 133 (414)
...+++++|.+|..+|+|++|+.+|++++. .+|....+...++.+...++....+..+..+....
T Consensus 221 ~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 290 (378)
T 3q15_A 221 IAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDH 290 (378)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 345777888888888888888888888887 56656666666777776666666665555554443
No 168
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=98.89 E-value=1.1e-08 Score=85.54 Aligned_cols=100 Identities=15% Similarity=0.188 Sum_probs=88.0
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC------CH
Q 015029 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS------AELFADRAQASIKLQNFTEAVADANRAIELEPS------MS 70 (414)
Q Consensus 3 e~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~------~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~------~~ 70 (414)
..+...|..++..|+|++|+.+|.+++.+.+.. ..++.++|.+|..+|++++|+..+++++.+.+. ..
T Consensus 50 ~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~ 129 (164)
T 3ro3_A 50 IAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEG 129 (164)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHH
Confidence 457789999999999999999999999985543 678999999999999999999999999988432 36
Q ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHhCCC
Q 015029 71 KAYWRKATACMKLEEYETAKVALEKGASLAPG 102 (414)
Q Consensus 71 ~a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p~ 102 (414)
.+++.+|.+++.+|++++|...|++++.+...
T Consensus 130 ~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 161 (164)
T 3ro3_A 130 RACWSLGNAYTALGNHDQAMHFAEKHLEISRE 161 (164)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 78999999999999999999999999877543
No 169
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.88 E-value=4.9e-09 Score=102.66 Aligned_cols=125 Identities=16% Similarity=0.079 Sum_probs=100.6
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHh---CCC---CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-------CHHH
Q 015029 6 EKKAKEAFIDDYFELAYDLYSQAIEI---SPN---SAELFADRAQASIKLQNFTEAVADANRAIELEPS-------MSKA 72 (414)
Q Consensus 6 ~~~g~~~~~~g~y~~Ai~~y~~AL~~---~P~---~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~-------~~~a 72 (414)
+..|..++..|+|++|+.+|.+|+.+ .++ .+.++.++|.+|..+|++++|+..+.+|+.+.+. ...+
T Consensus 107 ~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 186 (383)
T 3ulq_A 107 FFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQC 186 (383)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHH
Confidence 44899999999999999999999997 233 4689999999999999999999999999999543 3568
Q ss_pred HHHHHHHHHHcCChHHHHHHHHHHHHhCCCCH------HHHHHHHHHHHHHhhhhhhhhhHHHH
Q 015029 73 YWRKATACMKLEEYETAKVALEKGASLAPGDS------RFTNLIKEFVGLLMQNAVYLCWNYEL 130 (414)
Q Consensus 73 ~~~~g~~~~~lg~y~~A~~~~~~a~~l~p~~~------~~~~~l~~~~~~~~~~~~~~~~~~~~ 130 (414)
++.+|.+|..+|+|++|..+|++++.+.+... .+...++.+...++.-..+..+..+.
T Consensus 187 ~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~a 250 (383)
T 3ulq_A 187 HSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRA 250 (383)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 99999999999999999999999998865432 24555666665555555554444443
No 170
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=98.88 E-value=5.7e-08 Score=93.36 Aligned_cols=113 Identities=11% Similarity=-0.051 Sum_probs=82.1
Q ss_pred HHHHHHHHHcCCH-HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcc--CHHHHHHHHHHHHHhCCCCHHHHHHHHHHH--
Q 015029 6 EKKAKEAFIDDYF-ELAYDLYSQAIEISPNSAELFADRAQASIKLQ--NFTEAVADANRAIELEPSMSKAYWRKATAC-- 80 (414)
Q Consensus 6 ~~~g~~~~~~g~y-~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~--~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~-- 80 (414)
..........|.| ++|+.+++++|.++|++..++..|+.++..++ ++++++.+++.++.++|.+..+|+.++.++
T Consensus 36 ~~~~~a~~~~~e~s~~aL~~t~~~L~~nP~~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk~y~aW~~R~~iL~~ 115 (306)
T 3dra_A 36 MGLLLALMKAEEYSERALHITELGINELASHYTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEKNYQIWNYRQLIIGQ 115 (306)
T ss_dssp HHHHHHHHHTTCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHCcccHHHHHHHHHHHHH
Confidence 3444455556665 47788888888888888778888888877777 788888888888888887777777777777
Q ss_pred --HHc---CChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHh
Q 015029 81 --MKL---EEYETAKVALEKGASLAPGDSRFTNLIKEFVGLLM 118 (414)
Q Consensus 81 --~~l---g~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~ 118 (414)
..+ +++++++.++.+++.++|.|..+....+-+...++
T Consensus 116 ~~~~l~~~~~~~~EL~~~~~~l~~~pkny~aW~~R~~vl~~l~ 158 (306)
T 3dra_A 116 IMELNNNDFDPYREFDILEAMLSSDPKNHHVWSYRKWLVDTFD 158 (306)
T ss_dssp HHHHTTTCCCTHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHhccccCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhc
Confidence 666 67777888888888888877776666655554443
No 171
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=98.88 E-value=2.7e-08 Score=99.55 Aligned_cols=112 Identities=14% Similarity=0.056 Sum_probs=96.4
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHcc--CHHHHHHHHHHHHHhCCCCHHH
Q 015029 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEI--------SPNSAELFADRAQASIKLQ--NFTEAVADANRAIELEPSMSKA 72 (414)
Q Consensus 3 e~~~~~g~~~~~~g~y~~Ai~~y~~AL~~--------~P~~~~~~~~ra~~~~kl~--~~~~Al~~~~~Ai~l~p~~~~a 72 (414)
..+.+.|.+++..|+|++|+.+|.+++.+ .+..+.++.++|.++++++ +|++|+.+|++|+.++|+++.+
T Consensus 95 ~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~~~ 174 (472)
T 4g1t_A 95 VTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSPYRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNPEF 174 (472)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCSSCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCHHH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhcccccchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCCHHH
Confidence 35678899999999999999999999987 3355789999999888764 6999999999999999999999
Q ss_pred HHHHHHHHHH---cCChHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 015029 73 YWRKATACMK---LEEYETAKVALEKGASLAPGDSRFTNLIKEFV 114 (414)
Q Consensus 73 ~~~~g~~~~~---lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~ 114 (414)
++.+|.+++. .+++++|+..|++++.++|.+..+...++.+.
T Consensus 175 ~~~~~~~~~~l~~~~~~~~al~~~~~al~l~p~~~~~~~~l~~~~ 219 (472)
T 4g1t_A 175 TSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDNQYLKVLLALKL 219 (472)
T ss_dssp HHHHHHHHHHHHHSCCCCCTHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCchHHHHHHHHHHHHhhcCCcchHHHHHHHHHH
Confidence 9999998665 46778999999999999999998777666544
No 172
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.87 E-value=2.9e-08 Score=82.37 Aligned_cols=100 Identities=17% Similarity=0.144 Sum_probs=88.6
Q ss_pred hCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHH
Q 015029 31 ISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSM---SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFT 107 (414)
Q Consensus 31 ~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~---~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~ 107 (414)
..|.+...++.+|.+++..|+|++|+..|++++.++|.+ ..+++.+|.+|+.+|+|++|+.+|++++.++|.+..+.
T Consensus 23 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 102 (148)
T 2dba_A 23 PGASSVEQLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKAL 102 (148)
T ss_dssp TTCCCHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHH
T ss_pred cchHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHH
Confidence 457789999999999999999999999999999999987 89999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHhhhhhhhhhHHHH
Q 015029 108 NLIKEFVGLLMQNAVYLCWNYEL 130 (414)
Q Consensus 108 ~~l~~~~~~~~~~~~~~~~~~~~ 130 (414)
..++.+...++....+..+..+.
T Consensus 103 ~~~a~~~~~~~~~~~A~~~~~~a 125 (148)
T 2dba_A 103 YRRSQALEKLGRLDQAVLDLQRC 125 (148)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHH
Confidence 88888886666655555554443
No 173
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=98.87 E-value=3.3e-08 Score=78.93 Aligned_cols=82 Identities=23% Similarity=0.332 Sum_probs=77.5
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 015029 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (414)
Q Consensus 3 e~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~ 82 (414)
..+...|..++..|++++|+..|.+++...|.+..++..+|.+|..+|++++|+..+++++.++|.+..+++.+|.++..
T Consensus 44 ~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~ 123 (125)
T 1na0_A 44 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQK 123 (125)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHh
Confidence 34677899999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred cC
Q 015029 83 LE 84 (414)
Q Consensus 83 lg 84 (414)
+|
T Consensus 124 ~g 125 (125)
T 1na0_A 124 QG 125 (125)
T ss_dssp HC
T ss_pred cc
Confidence 65
No 174
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.87 E-value=1.1e-08 Score=99.50 Aligned_cols=128 Identities=14% Similarity=0.102 Sum_probs=105.2
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC------H
Q 015029 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS------AELFADRAQASIKLQNFTEAVADANRAIELEPSM------S 70 (414)
Q Consensus 3 e~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~------~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~------~ 70 (414)
..+...|..++..|+|++|+.+|.+++.+.+.. ..++.++|.+|..+|++++|+.++++++.+.+.. .
T Consensus 188 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 267 (406)
T 3sf4_A 188 RAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEA 267 (406)
T ss_dssp HHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhCcCchHHH
Confidence 456788999999999999999999999986554 3489999999999999999999999999987765 7
Q ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHhhhhhhhhhHHHH
Q 015029 71 KAYWRKATACMKLEEYETAKVALEKGASLAPGD------SRFTNLIKEFVGLLMQNAVYLCWNYEL 130 (414)
Q Consensus 71 ~a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p~~------~~~~~~l~~~~~~~~~~~~~~~~~~~~ 130 (414)
.+++.+|.+|..+|++++|...|++++.+.+.. ..+...++.+...++....+..+..+.
T Consensus 268 ~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 333 (406)
T 3sf4_A 268 QSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGNHDQAMHFAEKH 333 (406)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 899999999999999999999999999886543 345556666666555555555554443
No 175
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=98.87 E-value=2.4e-08 Score=86.98 Aligned_cols=80 Identities=10% Similarity=0.002 Sum_probs=73.6
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC--HHHHHHHHHHHHHcCChHHHHHHHHHH
Q 015029 19 ELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSM--SKAYWRKATACMKLEEYETAKVALEKG 96 (414)
Q Consensus 19 ~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~--~~a~~~~g~~~~~lg~y~~A~~~~~~a 96 (414)
..|+..|.+++..+|+++.+++++|.+|..+|++++|+..|.+++.++|.. ..+++.+|.++..+|++++|..+|+++
T Consensus 91 ~~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~A~~~y~~a 170 (176)
T 2r5s_A 91 SPELKRLEQELAANPDNFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGNAIASKYRRQ 170 (176)
T ss_dssp CHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred chHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCCcHHHHHHHH
Confidence 346777888888999999999999999999999999999999999999975 669999999999999999999999988
Q ss_pred HH
Q 015029 97 AS 98 (414)
Q Consensus 97 ~~ 98 (414)
+.
T Consensus 171 l~ 172 (176)
T 2r5s_A 171 LY 172 (176)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 176
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.86 E-value=2.3e-08 Score=104.19 Aligned_cols=115 Identities=8% Similarity=0.002 Sum_probs=107.5
Q ss_pred HHHHHHHHHHHHcCC----------HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcc--CHHHHHHHHHHHHHhCCCCH
Q 015029 3 TDLEKKAKEAFIDDY----------FELAYDLYSQAIEISPNSAELFADRAQASIKLQ--NFTEAVADANRAIELEPSMS 70 (414)
Q Consensus 3 e~~~~~g~~~~~~g~----------y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~--~~~~Al~~~~~Ai~l~p~~~ 70 (414)
..+..+|.++...++ |++|+..|+++|+.+|.+..+|..|+.++.+++ +|++|+.+++++++++|.+.
T Consensus 64 taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~N~ 143 (567)
T 1dce_A 64 TLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNF 143 (567)
T ss_dssp HHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhccccc
Confidence 467788899988888 999999999999999999999999999999999 77999999999999999999
Q ss_pred HHHHHHHHHHHHcC-ChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 015029 71 KAYWRKATACMKLE-EYETAKVALEKGASLAPGDSRFTNLIKEFVGLL 117 (414)
Q Consensus 71 ~a~~~~g~~~~~lg-~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~ 117 (414)
.||.+++.++..+| .+++|++++.++++++|.|..+...+..+...+
T Consensus 144 ~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~saW~~r~~ll~~l 191 (567)
T 1dce_A 144 HCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQL 191 (567)
T ss_dssp HHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCccHHHHHHHHHHhh
Confidence 99999999999999 999999999999999999999988888776443
No 177
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=98.85 E-value=7.2e-08 Score=92.66 Aligned_cols=115 Identities=4% Similarity=-0.184 Sum_probs=102.6
Q ss_pred HHHHHHHHHHHHcC--CHHHHHHHHHHHHHhCCCCHHHHHHHHHHH----HHc---cCHHHHHHHHHHHHHhCCCCHHHH
Q 015029 3 TDLEKKAKEAFIDD--YFELAYDLYSQAIEISPNSAELFADRAQAS----IKL---QNFTEAVADANRAIELEPSMSKAY 73 (414)
Q Consensus 3 e~~~~~g~~~~~~g--~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~----~kl---~~~~~Al~~~~~Ai~l~p~~~~a~ 73 (414)
..+..+|.++...+ ++++|+..++.+|..+|.+..++..|+.++ ..+ +++++++.++++++.++|.+..+|
T Consensus 68 taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk~y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pkny~aW 147 (306)
T 3dra_A 68 TIWIYRFNILKNLPNRNLYDELDWCEEIALDNEKNYQIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSSDPKNHHVW 147 (306)
T ss_dssp HHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHcccccHHHHHHHHHHHHHHCcccHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 45678889999888 999999999999999999999999999999 777 789999999999999999999999
Q ss_pred HHHHHHHHHcCChH--HHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 015029 74 WRKATACMKLEEYE--TAKVALEKGASLAPGDSRFTNLIKEFVGLL 117 (414)
Q Consensus 74 ~~~g~~~~~lg~y~--~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~ 117 (414)
+.++.++..+|.++ +++.++.++++++|.|-.+......+...+
T Consensus 148 ~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~sAW~~R~~ll~~l 193 (306)
T 3dra_A 148 SYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSAWSHRFFLLFSK 193 (306)
T ss_dssp HHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHhcccChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhc
Confidence 99999999999998 999999999999999988777766655333
No 178
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.85 E-value=9.4e-09 Score=98.13 Aligned_cols=101 Identities=12% Similarity=0.049 Sum_probs=83.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--C----HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC------
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPN--S----AELFADRAQASIKLQNFTEAVADANRAIELEPSM------ 69 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~--~----~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~------ 69 (414)
+..+.+.|.++...|+|++|+.+|.+||.+.+. + ..++.++|.+|.. |+|++|+.+|++|+.+.+..
T Consensus 76 a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~ 154 (307)
T 2ifu_A 76 AKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQA 154 (307)
T ss_dssp HHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHH
Confidence 345677888888889999999999999887432 2 4678889999988 99999999999999887643
Q ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCC
Q 015029 70 SKAYWRKATACMKLEEYETAKVALEKGASLAPGD 103 (414)
Q Consensus 70 ~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p~~ 103 (414)
..+++++|.+|..+|+|++|+.+|++++.+.+.+
T Consensus 155 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~ 188 (307)
T 2ifu_A 155 AELIGKASRLLVRQQKFDEAAASLQKEKSMYKEM 188 (307)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc
Confidence 5788899999999999999999999999886543
No 179
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.85 E-value=2.1e-09 Score=105.52 Aligned_cols=127 Identities=13% Similarity=0.130 Sum_probs=103.0
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC------H
Q 015029 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS------AELFADRAQASIKLQNFTEAVADANRAIELEPSM------S 70 (414)
Q Consensus 3 e~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~------~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~------~ 70 (414)
..+...|..++..|+|++|+.+|.+++.+.+.. ..++.++|.+|+.+|++++|+..+++++.+.+.. .
T Consensus 224 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 303 (411)
T 4a1s_A 224 RACGNLGNTYYLLGDFQAAIEHHQERLRIAREFGDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAVELGEREVEA 303 (411)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 456788999999999999999999999987653 2389999999999999999999999999998743 7
Q ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHhhhhhhhhhHHH
Q 015029 71 KAYWRKATACMKLEEYETAKVALEKGASLAPGD------SRFTNLIKEFVGLLMQNAVYLCWNYE 129 (414)
Q Consensus 71 ~a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p~~------~~~~~~l~~~~~~~~~~~~~~~~~~~ 129 (414)
.+++.+|.+|..+|++++|..+|++++.+.+.. ..+...++.+...++....+..+..+
T Consensus 304 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 368 (411)
T 4a1s_A 304 QSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQELGDRIGEARACWSLGNAHSAIGGHERALKYAEQ 368 (411)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 899999999999999999999999999875532 22455566666555555555444444
No 180
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.82 E-value=3.3e-08 Score=89.20 Aligned_cols=125 Identities=13% Similarity=-0.005 Sum_probs=102.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcc----CHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQ----NFTEAVADANRAIELEPSMSKAYWRKA 77 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~----~~~~Al~~~~~Ai~l~p~~~~a~~~~g 77 (414)
+..+...|..++..+++++|+.+|.++++. .++.+++++|.+|.. + ++++|+..|++|+. +.++.+++.+|
T Consensus 18 ~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--g~~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~--~g~~~a~~~Lg 92 (212)
T 3rjv_A 18 RRAQYYLADTWVSSGDYQKAEYWAQKAAAQ--GDGDALALLAQLKIR-NPQQADYPQARQLAEKAVE--AGSKSGEIVLA 92 (212)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHT--TCHHHHHHHHHHTTS-STTSCCHHHHHHHHHHHHH--TTCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHH--CCCHHHHHHHH
Confidence 456788999999999999999999999886 578999999999988 7 89999999999965 57899999999
Q ss_pred HHHHH----cCChHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHH----HhhhhhhhhhHHHHH
Q 015029 78 TACMK----LEEYETAKVALEKGASLAPG--DSRFTNLIKEFVGL----LMQNAVYLCWNYELL 131 (414)
Q Consensus 78 ~~~~~----lg~y~~A~~~~~~a~~l~p~--~~~~~~~l~~~~~~----~~~~~~~~~~~~~~~ 131 (414)
.+|.. .+++++|+.+|+++..+++. +..+...++.+... .........|.....
T Consensus 93 ~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~ 156 (212)
T 3rjv_A 93 RVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSS 156 (212)
T ss_dssp HHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHH
T ss_pred HHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHH
Confidence 99998 89999999999999998884 46777778777744 223334444544433
No 181
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.81 E-value=4.3e-08 Score=92.54 Aligned_cols=97 Identities=15% Similarity=0.118 Sum_probs=87.8
Q ss_pred CCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 015029 33 PNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKE 112 (414)
Q Consensus 33 P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~ 112 (414)
|.++..+..+|.+|+..|+|++|+..|.+|+.++|.++.+++.+|.+|+.+|+|++|+..|++++.++|++..+...++.
T Consensus 1 p~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~ 80 (281)
T 2c2l_A 1 SPSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQ 80 (281)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHH
T ss_pred ChhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 56788999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHHHhhhhhhhhhHHH
Q 015029 113 FVGLLMQNAVYLCWNYE 129 (414)
Q Consensus 113 ~~~~~~~~~~~~~~~~~ 129 (414)
+...++.-..+..+...
T Consensus 81 ~~~~~g~~~~A~~~~~~ 97 (281)
T 2c2l_A 81 CQLEMESYDEAIANLQR 97 (281)
T ss_dssp HHHHTTCHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHH
Confidence 88777665555544444
No 182
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=98.81 E-value=1.3e-08 Score=87.87 Aligned_cols=69 Identities=20% Similarity=0.205 Sum_probs=63.5
Q ss_pred HHHHHHHHHHHHHcCCH----------HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcc-----------CHHHHHHHHH
Q 015029 2 ATDLEKKAKEAFIDDYF----------ELAYDLYSQAIEISPNSAELFADRAQASIKLQ-----------NFTEAVADAN 60 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y----------~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~-----------~~~~Al~~~~ 60 (414)
++.+.+.|.++...+++ ++||..|.+||+++|+++.+|+++|.+|..+| +|++|+.+|+
T Consensus 36 aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~ 115 (158)
T 1zu2_A 36 ADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQ 115 (158)
T ss_dssp HHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHH
Confidence 56788899999988775 59999999999999999999999999999885 8999999999
Q ss_pred HHHHhCCCCH
Q 015029 61 RAIELEPSMS 70 (414)
Q Consensus 61 ~Ai~l~p~~~ 70 (414)
+|++++|++.
T Consensus 116 kAl~l~P~~~ 125 (158)
T 1zu2_A 116 QAVDEQPDNT 125 (158)
T ss_dssp HHHHHCTTCH
T ss_pred HHHHhCCCCH
Confidence 9999999875
No 183
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.80 E-value=1.7e-08 Score=94.72 Aligned_cols=127 Identities=14% Similarity=0.108 Sum_probs=101.0
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC------H
Q 015029 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS------AELFADRAQASIKLQNFTEAVADANRAIELEPSM------S 70 (414)
Q Consensus 3 e~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~------~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~------~ 70 (414)
..+...|..++..|++++|+.+|.+++...+.. ..++.++|.+|..+|++++|+..+++++.+.+.. .
T Consensus 184 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 263 (338)
T 3ro2_A 184 RAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEA 263 (338)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhcchhHHH
Confidence 356788999999999999999999999885443 3489999999999999999999999999987654 7
Q ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHhhhhhhhhhHHH
Q 015029 71 KAYWRKATACMKLEEYETAKVALEKGASLAPGD------SRFTNLIKEFVGLLMQNAVYLCWNYE 129 (414)
Q Consensus 71 ~a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p~~------~~~~~~l~~~~~~~~~~~~~~~~~~~ 129 (414)
.+++.+|.+|..+|++++|...|++++.+.+.. ..+...++.+...++....+..+..+
T Consensus 264 ~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 328 (338)
T 3ro2_A 264 QSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMHFAEK 328 (338)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHH
Confidence 799999999999999999999999999876532 22444556665544444444444333
No 184
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.80 E-value=3.6e-08 Score=96.46 Aligned_cols=101 Identities=15% Similarity=0.037 Sum_probs=90.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC------CHHHHHHHHHHHHHccCHHHHHHHHHHHHH-----hCCCCH
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPN------SAELFADRAQASIKLQNFTEAVADANRAIE-----LEPSMS 70 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~------~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~-----l~p~~~ 70 (414)
+..+...|.+++..|+|++|+.+|.+|+.+.+. ...++.++|.+|..+|++++|+.++++|+. .+|...
T Consensus 182 ~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~ 261 (378)
T 3q15_A 182 IQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLLP 261 (378)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhHH
Confidence 445678999999999999999999999997431 256899999999999999999999999999 677789
Q ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHhCCC
Q 015029 71 KAYWRKATACMKLEEYETAKVALEKGASLAPG 102 (414)
Q Consensus 71 ~a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p~ 102 (414)
.+++.+|.+|+.+|++++|..+|++++.+.+.
T Consensus 262 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 293 (378)
T 3q15_A 262 KVLFGLSWTLCKAGQTQKAFQFIEEGLDHITA 293 (378)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCT
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998654
No 185
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.78 E-value=6e-08 Score=76.29 Aligned_cols=74 Identities=16% Similarity=0.031 Sum_probs=69.4
Q ss_pred CCCCHHHHHHHHHHHHHccC---HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHH
Q 015029 32 SPNSAELFADRAQASIKLQN---FTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSR 105 (414)
Q Consensus 32 ~P~~~~~~~~ra~~~~kl~~---~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p~~~~ 105 (414)
+|+++.++..+|.+++..++ ..+|...+++|+.++|+++.+++.+|.+++..|+|++|+..|++++..+|.++.
T Consensus 2 ~p~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~~~ 78 (93)
T 3bee_A 2 NAVTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPNLD 78 (93)
T ss_dssp CCCCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTTCC
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCcc
Confidence 68999999999999987766 799999999999999999999999999999999999999999999999998543
No 186
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.78 E-value=3e-08 Score=93.94 Aligned_cols=105 Identities=17% Similarity=0.027 Sum_probs=66.1
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC--HHHHHHHHHHHHHccCHHHHHHHHHHHHHhC--CC-CHHHHHHHHHH
Q 015029 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPNS--AELFADRAQASIKLQNFTEAVADANRAIELE--PS-MSKAYWRKATA 79 (414)
Q Consensus 5 ~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~--~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~--p~-~~~a~~~~g~~ 79 (414)
++..|..++..++|++|+.+|+.++...+.. ..+++++|.++..+|++++|+.+|++++... |. .+.+++++|.|
T Consensus 138 ~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~gla 217 (282)
T 4f3v_A 138 AWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAANLALFTEAERRLTEANDSPAGEACARAIAWYLAMA 217 (282)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHHH
Confidence 4556666666677777776666555432111 2466777777777777777777777776433 33 45577777777
Q ss_pred HHHcCChHHHHHHHHHHHHhCCCCHHHHHHH
Q 015029 80 CMKLEEYETAKVALEKGASLAPGDSRFTNLI 110 (414)
Q Consensus 80 ~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l 110 (414)
+..+|+.++|...|++++..+|. ..+...|
T Consensus 218 L~~lGr~deA~~~l~~a~a~~P~-~~~~~aL 247 (282)
T 4f3v_A 218 RRSQGNESAAVALLEWLQTTHPE-PKVAAAL 247 (282)
T ss_dssp HHHHTCHHHHHHHHHHHHHHSCC-HHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHhcCCc-HHHHHHH
Confidence 77777777777777777777776 5444444
No 187
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.78 E-value=7.9e-08 Score=98.33 Aligned_cols=112 Identities=16% Similarity=0.142 Sum_probs=93.4
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHHccCHHHHHHHHHHHHHh-----CCC-
Q 015029 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEI-----SPNS---AELFADRAQASIKLQNFTEAVADANRAIEL-----EPS- 68 (414)
Q Consensus 3 e~~~~~g~~~~~~g~y~~Ai~~y~~AL~~-----~P~~---~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l-----~p~- 68 (414)
..+...+..+..+|+|++|+.+|.++|.+ .|++ +..+.++|.+|..+|+|++|+..+++++.+ .++
T Consensus 310 ~~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~H 389 (490)
T 3n71_A 310 KDTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNN 389 (490)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTC
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCC
Confidence 34556677788999999999999999987 3444 678999999999999999999999999977 444
Q ss_pred --CHHHHHHHHHHHHHcCChHHHHHHHHHHHH-----hCCCCHHHHHHHHHHH
Q 015029 69 --MSKAYWRKATACMKLEEYETAKVALEKGAS-----LAPGDSRFTNLIKEFV 114 (414)
Q Consensus 69 --~~~a~~~~g~~~~~lg~y~~A~~~~~~a~~-----l~p~~~~~~~~l~~~~ 114 (414)
....++++|.+|..+|+|++|...|++++. +.|+++.....+..+.
T Consensus 390 p~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~ 442 (490)
T 3n71_A 390 AQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRM 442 (490)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHH
Confidence 456899999999999999999999999987 4788887666544433
No 188
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.78 E-value=3.1e-08 Score=93.77 Aligned_cols=88 Identities=10% Similarity=-0.010 Sum_probs=77.6
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC--HHHHHHHHHHHHHcCChHH
Q 015029 11 EAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSM--SKAYWRKATACMKLEEYET 88 (414)
Q Consensus 11 ~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~--~~a~~~~g~~~~~lg~y~~ 88 (414)
.+...+++..|+..|.+++..+|+++.+++++|.+|...|++++|+..|.++++++|++ ..++.++|.++..+|+.++
T Consensus 194 ~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~ 273 (287)
T 3qou_A 194 ELLXQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAALGTGDA 273 (287)
T ss_dssp HHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHHCTTCH
T ss_pred HHHhhcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHHHHHHcCCCCc
Confidence 34444444445666777788999999999999999999999999999999999999998 8999999999999999999
Q ss_pred HHHHHHHHHH
Q 015029 89 AKVALEKGAS 98 (414)
Q Consensus 89 A~~~~~~a~~ 98 (414)
|...|++++.
T Consensus 274 a~~~~r~al~ 283 (287)
T 3qou_A 274 LASXYRRQLY 283 (287)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999998874
No 189
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=98.78 E-value=4.4e-08 Score=79.01 Aligned_cols=95 Identities=14% Similarity=0.109 Sum_probs=81.0
Q ss_pred CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCC-------HHHH
Q 015029 35 SAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGD-------SRFT 107 (414)
Q Consensus 35 ~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p~~-------~~~~ 107 (414)
.+..++.+|.+++..|++++|+..|.+++.++|.++.+++.+|.+|+.+|+|++|..+|++++.+.|.+ ..+.
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (131)
T 1elr_A 3 QALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAY 82 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHHH
Confidence 467899999999999999999999999999999999999999999999999999999999999998876 6667
Q ss_pred HHHHHHHHHHhhhhhhhhhHHH
Q 015029 108 NLIKEFVGLLMQNAVYLCWNYE 129 (414)
Q Consensus 108 ~~l~~~~~~~~~~~~~~~~~~~ 129 (414)
..++.+...++.-..+..+...
T Consensus 83 ~~la~~~~~~~~~~~A~~~~~~ 104 (131)
T 1elr_A 83 ARIGNSYFKEEKYKDAIHFYNK 104 (131)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHhccHHHHHHHHHH
Confidence 7777777555554444444443
No 190
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.73 E-value=6.9e-08 Score=77.62 Aligned_cols=83 Identities=10% Similarity=-0.040 Sum_probs=71.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC--CHHHHHHHHHH
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPS--MSKAYWRKATA 79 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~--~~~a~~~~g~~ 79 (414)
+..+...|..++..|+|++|+..|.+++.++|++..+++++|.+|..+|++++|+..|++++.++|. ...+...+...
T Consensus 19 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~l~~~ 98 (115)
T 2kat_A 19 MLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAWESGLAAAQSRGDQQVVKELQVF 98 (115)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccccccHHHHHHHHHH
Confidence 3457889999999999999999999999999999999999999999999999999999999999874 44555555555
Q ss_pred HHHcC
Q 015029 80 CMKLE 84 (414)
Q Consensus 80 ~~~lg 84 (414)
+..++
T Consensus 99 l~~l~ 103 (115)
T 2kat_A 99 LRRLA 103 (115)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 54444
No 191
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.73 E-value=1.7e-07 Score=97.61 Aligned_cols=111 Identities=10% Similarity=0.071 Sum_probs=99.2
Q ss_pred HHHHHHHcCCH-HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccC----------HHHHHHHHHHHHHhCCCCHHHHHHH
Q 015029 8 KAKEAFIDDYF-ELAYDLYSQAIEISPNSAELFADRAQASIKLQN----------FTEAVADANRAIELEPSMSKAYWRK 76 (414)
Q Consensus 8 ~g~~~~~~g~y-~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~----------~~~Al~~~~~Ai~l~p~~~~a~~~~ 76 (414)
........|+| ++|+..|+++|..+|++..+|..|+.++..+++ |++|+.++++++.++|.+..+|+.+
T Consensus 34 ~~~~~~~~~~~~eeal~~~~~~l~~nP~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK~y~aW~hR 113 (567)
T 1dce_A 34 AVFQKRQAGELDESVLELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHR 113 (567)
T ss_dssp HHHHHHHTTCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHcCCCCHHHHHHHHHHHHHCchhHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 34445556666 578999999999999999999999999999998 9999999999999999999999999
Q ss_pred HHHHHHcC--ChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHh
Q 015029 77 ATACMKLE--EYETAKVALEKGASLAPGDSRFTNLIKEFVGLLM 118 (414)
Q Consensus 77 g~~~~~lg--~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~ 118 (414)
+.++..++ +|++|+.+|.++++++|.|..+....+-+...++
T Consensus 114 ~w~l~~l~~~~~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~l~ 157 (567)
T 1dce_A 114 CWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAA 157 (567)
T ss_dssp HHHHHTCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTC
T ss_pred HHHHHHcccccHHHHHHHHHHHHhhccccccHHHHHHHHHHHcC
Confidence 99999999 6799999999999999999988888777665443
No 192
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.72 E-value=2.5e-07 Score=89.73 Aligned_cols=107 Identities=9% Similarity=-0.023 Sum_probs=67.6
Q ss_pred HHHHHHHHHHHcC--CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccC-HHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 015029 4 DLEKKAKEAFIDD--YFELAYDLYSQAIEISPNSAELFADRAQASIKLQN-FTEAVADANRAIELEPSMSKAYWRKATAC 80 (414)
Q Consensus 4 ~~~~~g~~~~~~g--~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~-~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~ 80 (414)
.+..++.++...+ .+++++..++++|..+|.|..++.+|+.++..++. +++++.++.++|.++|.+..||.+++.++
T Consensus 110 aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~SAW~~R~~ll 189 (331)
T 3dss_A 110 TWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLL 189 (331)
T ss_dssp HHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhccCcccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
Confidence 3445555555555 36666666666666666666666666666666666 46666666666666666666666666666
Q ss_pred HHc--------------CChHHHHHHHHHHHHhCCCCHHHHHHH
Q 015029 81 MKL--------------EEYETAKVALEKGASLAPGDSRFTNLI 110 (414)
Q Consensus 81 ~~l--------------g~y~~A~~~~~~a~~l~p~~~~~~~~l 110 (414)
..+ +.++++++++.+++.++|+|..+...+
T Consensus 190 ~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~~~P~d~SaW~Y~ 233 (331)
T 3dss_A 190 PQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAWFYH 233 (331)
T ss_dssp HHHSCCC------CCCHHHHHHHHHHHHHHHHHSTTCHHHHHHH
T ss_pred HHhhhccccccccccchHHHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 665 346666666666666666666655433
No 193
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.72 E-value=3.7e-07 Score=89.05 Aligned_cols=105 Identities=8% Similarity=0.048 Sum_probs=95.6
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcc-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc-C-ChHHHHH
Q 015029 15 DDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQ-NFTEAVADANRAIELEPSMSKAYWRKATACMKL-E-EYETAKV 91 (414)
Q Consensus 15 ~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~-~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~l-g-~y~~A~~ 91 (414)
.+..++|+.+++++|.++|.+..++..|+.++..++ .+++++.+++.++.++|.+..+|+.++.++..+ + ++++++.
T Consensus 67 ~e~se~AL~lt~~~L~~nP~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~~~~~~EL~ 146 (349)
T 3q7a_A 67 EEKSERALELTEIIVRMNPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISPQDPVSEIE 146 (349)
T ss_dssp TCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCCSCCHHHHH
T ss_pred CCCCHHHHHHHHHHHHhCchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcCCChHHHHH
Confidence 444578999999999999999999999999999999 599999999999999999999999999999998 8 9999999
Q ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHHhh
Q 015029 92 ALEKGASLAPGDSRFTNLIKEFVGLLMQ 119 (414)
Q Consensus 92 ~~~~a~~l~p~~~~~~~~l~~~~~~~~~ 119 (414)
++.+++.++|.|..+....+-+...++.
T Consensus 147 ~~~k~L~~dpkNy~AW~~R~wvl~~l~~ 174 (349)
T 3q7a_A 147 YIHGSLLPDPKNYHTWAYLHWLYSHFST 174 (349)
T ss_dssp HHHHHTSSCTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHhcc
Confidence 9999999999999887777666655443
No 194
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.71 E-value=4e-07 Score=88.30 Aligned_cols=114 Identities=7% Similarity=-0.011 Sum_probs=102.0
Q ss_pred HHHHHHHHHHHcCC----------HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcc--CHHHHHHHHHHHHHhCCCCHH
Q 015029 4 DLEKKAKEAFIDDY----------FELAYDLYSQAIEISPNSAELFADRAQASIKLQ--NFTEAVADANRAIELEPSMSK 71 (414)
Q Consensus 4 ~~~~~g~~~~~~g~----------y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~--~~~~Al~~~~~Ai~l~p~~~~ 71 (414)
.+..++.++...+. +.+++..++.+|..+|.+..+|..|+.++..++ .+++++.++++++.++|.+..
T Consensus 66 aWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dprNy~ 145 (331)
T 3dss_A 66 LWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFH 145 (331)
T ss_dssp HHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCCCHH
Confidence 45566666666554 789999999999999999999999999999999 499999999999999999999
Q ss_pred HHHHHHHHHHHcCC-hHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 015029 72 AYWRKATACMKLEE-YETAKVALEKGASLAPGDSRFTNLIKEFVGLL 117 (414)
Q Consensus 72 a~~~~g~~~~~lg~-y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~ 117 (414)
||.+++.++..+|. ++++++++.+++.++|.|..+...+..+...+
T Consensus 146 AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~SAW~~R~~ll~~l 192 (331)
T 3dss_A 146 CWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQL 192 (331)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHh
Confidence 99999999999999 69999999999999999999888777666444
No 195
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.70 E-value=5.8e-08 Score=87.59 Aligned_cols=109 Identities=14% Similarity=0.011 Sum_probs=96.3
Q ss_pred HHHHHHHHHHHHHcC----CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----ccCHHHHHHHHHHHHHhCC--CCHH
Q 015029 2 ATDLEKKAKEAFIDD----YFELAYDLYSQAIEISPNSAELFADRAQASIK----LQNFTEAVADANRAIELEP--SMSK 71 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g----~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~k----l~~~~~Al~~~~~Ai~l~p--~~~~ 71 (414)
+..+...|..++. + ++++|+.+|.+|++ +.++.+++++|.+|.. .+++.+|+..|++|+.+++ .++.
T Consensus 50 ~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~--~g~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~ 126 (212)
T 3rjv_A 50 GDALALLAQLKIR-NPQQADYPQARQLAEKAVE--AGSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVD 126 (212)
T ss_dssp HHHHHHHHHHTTS-STTSCCHHHHHHHHHHHHH--TTCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHH
T ss_pred HHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHH
Confidence 3456778888887 7 99999999999976 5689999999999998 8899999999999999988 4599
Q ss_pred HHHHHHHHHHH----cCChHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 015029 72 AYWRKATACMK----LEEYETAKVALEKGASLAPGDSRFTNLIKEFV 114 (414)
Q Consensus 72 a~~~~g~~~~~----lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~ 114 (414)
+++.+|.+|.. .+++++|+.+|+++..+ +.+......++.+.
T Consensus 127 a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~-~~~~~a~~~Lg~~y 172 (212)
T 3rjv_A 127 AQMLLGLIYASGVHGPEDDVKASEYFKGSSSL-SRTGYAEYWAGMMF 172 (212)
T ss_dssp HHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT-SCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc-CCCHHHHHHHHHHH
Confidence 99999999999 89999999999999998 66666778888777
No 196
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.69 E-value=8.6e-08 Score=96.54 Aligned_cols=110 Identities=11% Similarity=0.147 Sum_probs=90.6
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHHccCHHHHHHHHHHHHHh-----CCC--
Q 015029 4 DLEKKAKEAFIDDYFELAYDLYSQAIEI-----SPNS---AELFADRAQASIKLQNFTEAVADANRAIEL-----EPS-- 68 (414)
Q Consensus 4 ~~~~~g~~~~~~g~y~~Ai~~y~~AL~~-----~P~~---~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l-----~p~-- 68 (414)
.....+......|+|++|+.+|.++|.+ .|++ +..+.++|.+|..+|+|++|+..+++++.+ .++
T Consensus 300 ~~le~~~~~~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp 379 (433)
T 3qww_A 300 NVIEEFRRAKHYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSL 379 (433)
T ss_dssp HHHHHHHHHTTTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCH
T ss_pred HHHHHHHHhhhccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCCh
Confidence 3344455555678999999999999986 4454 577899999999999999999999999977 344
Q ss_pred -CHHHHHHHHHHHHHcCChHHHHHHHHHHHHh-----CCCCHHHHHHHHHH
Q 015029 69 -MSKAYWRKATACMKLEEYETAKVALEKGASL-----APGDSRFTNLIKEF 113 (414)
Q Consensus 69 -~~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l-----~p~~~~~~~~l~~~ 113 (414)
....++++|.+|..+|+|++|...|++++.+ .|+++........+
T Consensus 380 ~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~l~~~l 430 (433)
T 3qww_A 380 NVASMWLKLGRLYMGLENKAAGEKALKKAIAIMEVAHGKDHPYISEIKQEI 430 (433)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHH
Confidence 4568999999999999999999999999874 78888776655443
No 197
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.68 E-value=7e-08 Score=84.63 Aligned_cols=100 Identities=8% Similarity=0.110 Sum_probs=85.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---CCCC----HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC------
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEI---SPNS----AELFADRAQASIKLQNFTEAVADANRAIELEPS------ 68 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~---~P~~----~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~------ 68 (414)
+..+...|..++..|++++|+.+|.+++.+ .+++ ..++.++|.+|..+|++++|+..+++++.+.+.
T Consensus 66 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 145 (203)
T 3gw4_A 66 HRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADDQVA 145 (203)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccchHH
Confidence 345778899999999999999999999998 4433 567999999999999999999999999987432
Q ss_pred CHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCC
Q 015029 69 MSKAYWRKATACMKLEEYETAKVALEKGASLAP 101 (414)
Q Consensus 69 ~~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p 101 (414)
...++..+|.++..+|++++|..+|++++.+..
T Consensus 146 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 178 (203)
T 3gw4_A 146 IACAFRGLGDLAQQEKNLLEAQQHWLRARDIFA 178 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHH
Confidence 234678999999999999999999999987643
No 198
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.67 E-value=2.3e-07 Score=74.11 Aligned_cols=76 Identities=16% Similarity=0.130 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-------CCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHH
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEIS-------PNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYW 74 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~-------P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~ 74 (414)
+++.+..|..+|..++|..|+..|..|++.. +..+.++.++|.||+++|+++.|+..+++|+.++|++..+..
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~ 84 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANG 84 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHh
Confidence 4556666777777777777777776666642 123455555566666666666666666666666665555544
Q ss_pred HHH
Q 015029 75 RKA 77 (414)
Q Consensus 75 ~~g 77 (414)
+++
T Consensus 85 n~~ 87 (104)
T 2v5f_A 85 NLK 87 (104)
T ss_dssp HHH
T ss_pred hHH
Confidence 444
No 199
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.66 E-value=2e-07 Score=90.91 Aligned_cols=114 Identities=5% Similarity=-0.113 Sum_probs=105.8
Q ss_pred HHHHHHHHHHHHcC-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc-c-CHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 015029 3 TDLEKKAKEAFIDD-YFELAYDLYSQAIEISPNSAELFADRAQASIKL-Q-NFTEAVADANRAIELEPSMSKAYWRKATA 79 (414)
Q Consensus 3 e~~~~~g~~~~~~g-~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl-~-~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~ 79 (414)
..+..++.++...+ .+++++..++.+|..+|.+..++..|+.++..+ + ++++++.++++++.++|.+..+|+.++.+
T Consensus 89 taWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~dpkNy~AW~~R~wv 168 (349)
T 3q7a_A 89 TVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISPQDPVSEIEYIHGSLLPDPKNYHTWAYLHWL 168 (349)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCCSCCHHHHHHHHHHTSSCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 45677899999999 599999999999999999999999999999998 8 99999999999999999999999999999
Q ss_pred HHHcCChH--------HHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 015029 80 CMKLEEYE--------TAKVALEKGASLAPGDSRFTNLIKEFVGL 116 (414)
Q Consensus 80 ~~~lg~y~--------~A~~~~~~a~~l~p~~~~~~~~l~~~~~~ 116 (414)
+..+|.++ ++++++.++++++|.|..+......+...
T Consensus 169 l~~l~~~~~~~~~~~~eELe~~~k~I~~dp~N~SAW~~R~~lL~~ 213 (349)
T 3q7a_A 169 YSHFSTLGRISEAQWGSELDWCNEMLRVDGRNNSAWGWRWYLRVS 213 (349)
T ss_dssp HHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHTT
T ss_pred HHHhccccccchhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Confidence 99999998 99999999999999999888887776633
No 200
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.63 E-value=3.8e-07 Score=93.47 Aligned_cols=124 Identities=10% Similarity=0.003 Sum_probs=102.9
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH-HHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHH-H
Q 015029 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSA-ELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATA-C 80 (414)
Q Consensus 3 e~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~-~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~-~ 80 (414)
.-+...|..+...|++++|+..|.++|...|.++ .+|.+++.++.+.|++++|+..|.+|+...|.....++..|.+ +
T Consensus 322 ~l~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~~~~~~~~a~~~~ 401 (530)
T 2ooe_A 322 LLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEY 401 (530)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCCTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhCccccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCchHHHHHHHHHHH
Confidence 3466778888999999999999999999999985 6899999999999999999999999999988887777777765 3
Q ss_pred HHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhhhhhhhhh
Q 015029 81 MKLEEYETAKVALEKGASLAPGDSRFTNLIKEFVGLLMQNAVYLCW 126 (414)
Q Consensus 81 ~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~~~~~~ 126 (414)
..+|+++.|...|+++++++|++..+...+..+...++....+..+
T Consensus 402 ~~~~~~~~A~~~~e~al~~~p~~~~~~~~~~~~~~~~g~~~~Ar~~ 447 (530)
T 2ooe_A 402 YCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVL 447 (530)
T ss_dssp HHTCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTTTCHHHHHHH
T ss_pred HHcCChhHHHHHHHHHHHHCCCCHHHHHHHHHHHHhCCCHhhHHHH
Confidence 4699999999999999999999988877777766444443333333
No 201
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.60 E-value=6.2e-07 Score=71.58 Aligned_cols=80 Identities=14% Similarity=0.054 Sum_probs=70.9
Q ss_pred CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-------CCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHH
Q 015029 35 SAELFADRAQASIKLQNFTEAVADANRAIELE-------PSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFT 107 (414)
Q Consensus 35 ~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~-------p~~~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~ 107 (414)
++.-++.+|..++..++|..|+..|+.|+.+. .....++..+|.+|+.+|+++.|+..+++++.++|++..+.
T Consensus 4 sa~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~ 83 (104)
T 2v5f_A 4 TAEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRAN 83 (104)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred CHHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHH
Confidence 35567889999999999999999999999873 34678999999999999999999999999999999999887
Q ss_pred HHHHHHH
Q 015029 108 NLIKEFV 114 (414)
Q Consensus 108 ~~l~~~~ 114 (414)
..+...+
T Consensus 84 ~n~~~~~ 90 (104)
T 2v5f_A 84 GNLKYFE 90 (104)
T ss_dssp HHHHHHH
T ss_pred hhHHHHH
Confidence 7666555
No 202
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.60 E-value=1.2e-07 Score=89.83 Aligned_cols=124 Identities=9% Similarity=-0.050 Sum_probs=102.4
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC--HHHHHHHHHHHHH
Q 015029 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSM--SKAYWRKATACMK 82 (414)
Q Consensus 5 ~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~--~~a~~~~g~~~~~ 82 (414)
....+..+...|+|++|++.|..++...|.+. +++.+|.++++.++|.+|+..|+.++...+.. ..+++.+|.++..
T Consensus 105 ~LayA~~L~~~g~y~eA~~~l~~~~~~~p~~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~ 183 (282)
T 4f3v_A 105 TMGFAACEAAQGNYADAMEALEAAPVAGSEHL-VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAAN 183 (282)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHTSSCCTTCHHH-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHhcCCchH-HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHHH
Confidence 35578889999999999999999999999888 99999999999999999999999887653221 4589999999999
Q ss_pred cCChHHHHHHHHHHHHhC--CC-CHHHHHHHHHHHHHHhhhhhhhhhHHH
Q 015029 83 LEEYETAKVALEKGASLA--PG-DSRFTNLIKEFVGLLMQNAVYLCWNYE 129 (414)
Q Consensus 83 lg~y~~A~~~~~~a~~l~--p~-~~~~~~~l~~~~~~~~~~~~~~~~~~~ 129 (414)
+|++++|+.+|+++.... |. ...+...++.|...++....+.....+
T Consensus 184 LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~deA~~~l~~ 233 (282)
T 4f3v_A 184 LALFTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGNESAAVALLEW 233 (282)
T ss_dssp TTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 999999999999998544 54 445777788888777666666554444
No 203
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.59 E-value=3.6e-07 Score=91.91 Aligned_cols=112 Identities=16% Similarity=0.077 Sum_probs=93.6
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHHccCHHHHHHHHHHHHHh-----CCC-
Q 015029 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEI-----SPNS---AELFADRAQASIKLQNFTEAVADANRAIEL-----EPS- 68 (414)
Q Consensus 3 e~~~~~g~~~~~~g~y~~Ai~~y~~AL~~-----~P~~---~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l-----~p~- 68 (414)
+.+......+..+|+|++|+.+|.++|.+ .|++ ...+.++|.+|..+|+|++|+..+++++.+ .+.
T Consensus 288 ~~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~H 367 (429)
T 3qwp_A 288 QESLKKIEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSH 367 (429)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSC
T ss_pred HHHHHHHHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCC
Confidence 44556667788999999999999999976 3444 578899999999999999999999999977 344
Q ss_pred --CHHHHHHHHHHHHHcCChHHHHHHHHHHHH-----hCCCCHHHHHHHHHHH
Q 015029 69 --MSKAYWRKATACMKLEEYETAKVALEKGAS-----LAPGDSRFTNLIKEFV 114 (414)
Q Consensus 69 --~~~a~~~~g~~~~~lg~y~~A~~~~~~a~~-----l~p~~~~~~~~l~~~~ 114 (414)
....++++|.+|..+|+|++|...|++++. +.|+++.....+..+.
T Consensus 368 p~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~ 420 (429)
T 3qwp_A 368 PVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGREHSLIEDLILLLE 420 (429)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHH
Confidence 456899999999999999999999999987 4788887766654444
No 204
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=98.57 E-value=1.3e-06 Score=85.32 Aligned_cols=102 Identities=19% Similarity=0.118 Sum_probs=65.4
Q ss_pred HHHHHHHHHHHHHcCC---HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH------------------------------
Q 015029 2 ATDLEKKAKEAFIDDY---FELAYDLYSQAIEISPNSAELFADRAQASIK------------------------------ 48 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~---y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~k------------------------------ 48 (414)
|-+++-+|..++..++ +.+|+.+|.+||+++|+++.++..++.||..
T Consensus 196 Aydl~Lra~~~l~~~~~~~~~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~a~~~~~~ 275 (372)
T 3ly7_A 196 LLTNFYQAHDYLLHGDDKSLNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVTLPELNN 275 (372)
T ss_dssp GHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTCGGGTT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHHHHHhcccCCc
Confidence 3456778888887655 5789999999999999998888877776642
Q ss_pred --------------ccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCH
Q 015029 49 --------------LQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDS 104 (414)
Q Consensus 49 --------------l~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p~~~ 104 (414)
.|++++|+..+++|+.++| +..+|..+|.++...|++++|.+.|.+++.++|..+
T Consensus 276 ~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~-s~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~ 344 (372)
T 3ly7_A 276 LSIIYQIKAVSALVKGKTDESYQAINTGIDLEM-SWLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGAN 344 (372)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHH
T ss_pred CHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcC
Confidence 3455555555555555553 244445555555555555555555555555555443
No 205
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=98.55 E-value=6e-07 Score=74.16 Aligned_cols=103 Identities=10% Similarity=0.009 Sum_probs=89.7
Q ss_pred HHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHH---HHHHHHHHHHhC-C-CCHHHHHHHHHHHHHcCChH
Q 015029 13 FIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTE---AVADANRAIELE-P-SMSKAYWRKATACMKLEEYE 87 (414)
Q Consensus 13 ~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~---Al~~~~~Ai~l~-p-~~~~a~~~~g~~~~~lg~y~ 87 (414)
........+...|.+++..++.+....+++|.++.+..+... ++..++..+..+ | ...+++|.+|+.++++|+|.
T Consensus 12 ~~~~~l~~~~~~y~~e~~~~~~s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~ 91 (126)
T 1nzn_A 12 VSVEDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYE 91 (126)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred CCHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHH
Confidence 344456677788988888888899999999999999887666 999999998877 5 57789999999999999999
Q ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 015029 88 TAKVALEKGASLAPGDSRFTNLIKEFVG 115 (414)
Q Consensus 88 ~A~~~~~~a~~l~p~~~~~~~~l~~~~~ 115 (414)
.|..+++.+++++|+|.++......++.
T Consensus 92 ~A~~~~~~lL~~eP~n~QA~~Lk~~i~~ 119 (126)
T 1nzn_A 92 KALKYVRGLLQTEPQNNQAKELERLIDK 119 (126)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 9999999999999999998888777763
No 206
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.52 E-value=1.2e-06 Score=73.53 Aligned_cols=89 Identities=13% Similarity=0.019 Sum_probs=56.2
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----ccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-
Q 015029 8 KAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIK----LQNFTEAVADANRAIELEPSMSKAYWRKATACMK- 82 (414)
Q Consensus 8 ~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~k----l~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~- 82 (414)
.|..++..+.+++|+.+|.+|.+. .++.+++++|.+|.. .+++.+|+..|++|.+. .++.+++++|.+|..
T Consensus 31 lg~~y~~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G 106 (138)
T 1klx_A 31 LSLVSNSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQYAG 106 (138)
T ss_dssp HHHHTCTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHT
T ss_pred HHHHHHcCCCHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC--CCHHHHHHHHHHHHCC
Confidence 445555555666666666666665 456666666666666 56666666666666654 456666666666666
Q ss_pred ---cCChHHHHHHHHHHHHhC
Q 015029 83 ---LEEYETAKVALEKGASLA 100 (414)
Q Consensus 83 ---lg~y~~A~~~~~~a~~l~ 100 (414)
.+++++|..+|+++.++.
T Consensus 107 ~g~~~d~~~A~~~~~~Aa~~g 127 (138)
T 1klx_A 107 KGVVKNEKQAVKTFEKACRLG 127 (138)
T ss_dssp SSSCCCHHHHHHHHHHHHHTT
T ss_pred CCCCcCHHHHHHHHHHHHHCC
Confidence 666666666666666553
No 207
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.52 E-value=1.1e-06 Score=85.12 Aligned_cols=97 Identities=9% Similarity=0.046 Sum_probs=53.4
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhC--------CCCH
Q 015029 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPNS------AELFADRAQASIKLQNFTEAVADANRAIELE--------PSMS 70 (414)
Q Consensus 5 ~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~------~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~--------p~~~ 70 (414)
+...|..++..|+|++|+.+|.+++.+.+.. ..++.++|.+|..+|+|++|+..+++++.+. |...
T Consensus 56 ~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~ 135 (373)
T 1hz4_A 56 TSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHE 135 (373)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHH
T ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHH
Confidence 3445555555666666666666655543322 1234555666666666666666666666553 2233
Q ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHhCC
Q 015029 71 KAYWRKATACMKLEEYETAKVALEKGASLAP 101 (414)
Q Consensus 71 ~a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p 101 (414)
.++..+|.+++.+|++++|...|++++.+.+
T Consensus 136 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 166 (373)
T 1hz4_A 136 FLVRIRAQLLWAWARLDEAEASARSGIEVLS 166 (373)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHhh
Confidence 4555566666666666666666666665554
No 208
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.49 E-value=1.4e-06 Score=89.23 Aligned_cols=106 Identities=13% Similarity=0.082 Sum_probs=94.1
Q ss_pred HHHHHHHHHHHH-------cCCHH-------HHHHHHHHHHH-hCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC
Q 015029 3 TDLEKKAKEAFI-------DDYFE-------LAYDLYSQAIE-ISPNSAELFADRAQASIKLQNFTEAVADANRAIELEP 67 (414)
Q Consensus 3 e~~~~~g~~~~~-------~g~y~-------~Ai~~y~~AL~-~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p 67 (414)
+.+...|..+.. .|+++ +|+..|.+|+. ..|++..++..+|.++.++|++++|+..|++++.++|
T Consensus 273 ~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~~~~l~~~~~~~~~~~g~~~~A~~~~~~al~~~p 352 (530)
T 2ooe_A 273 DIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIED 352 (530)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSS
T ss_pred HHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHhcCCHHHHHHHHHHHhCccc
Confidence 345666777665 69987 99999999998 7999999999999999999999999999999999999
Q ss_pred CCH-HHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHH
Q 015029 68 SMS-KAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTN 108 (414)
Q Consensus 68 ~~~-~a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~ 108 (414)
.++ .+|..+|.++.+.|+++.|...|+++++..|.+..+..
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~~~~~~ 394 (530)
T 2ooe_A 353 IDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYV 394 (530)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCCTHHHH
T ss_pred cCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCchHHHH
Confidence 885 69999999999999999999999999999887654433
No 209
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.46 E-value=1.6e-06 Score=83.92 Aligned_cols=128 Identities=12% Similarity=-0.077 Sum_probs=98.4
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH-----HHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC------HH
Q 015029 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSA-----ELFADRAQASIKLQNFTEAVADANRAIELEPSM------SK 71 (414)
Q Consensus 3 e~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~-----~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~------~~ 71 (414)
+.+...|..++..|++++|+.++.+++...|.+. .++..+|.+|...|++++|+..+.+++.+.+.. ..
T Consensus 15 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~ 94 (373)
T 1hz4_A 15 EFNALRAQVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALW 94 (373)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHcCCCCchhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHHH
Confidence 4466789999999999999999999999887652 368899999999999999999999999986542 34
Q ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHhCC--------CCHHHHHHHHHHHHHHhhhhhhhhhHHHH
Q 015029 72 AYWRKATACMKLEEYETAKVALEKGASLAP--------GDSRFTNLIKEFVGLLMQNAVYLCWNYEL 130 (414)
Q Consensus 72 a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p--------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 130 (414)
+++.+|.++...|+|++|...|++++.+.+ ....+...++.+....+.-.....+..+.
T Consensus 95 ~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 161 (373)
T 1hz4_A 95 SLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSG 161 (373)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 578899999999999999999999998753 12234444555554444444444444433
No 210
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.42 E-value=2.3e-06 Score=86.66 Aligned_cols=104 Identities=17% Similarity=0.061 Sum_probs=48.8
Q ss_pred HHHHHHHHHHc-----CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcc---CHHHHHHHHHHHHHhCCCCHHHHHHH
Q 015029 5 LEKKAKEAFID-----DYFELAYDLYSQAIEISPNSAELFADRAQASIKLQ---NFTEAVADANRAIELEPSMSKAYWRK 76 (414)
Q Consensus 5 ~~~~g~~~~~~-----g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~---~~~~Al~~~~~Ai~l~p~~~~a~~~~ 76 (414)
+...|..+... +++++|+.+|.++++. .++.+++++|.+|...| ++++|+.+|++|++. .++.+++.+
T Consensus 294 ~~~Lg~~y~~~~~g~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~y~~~g~~~~~~~A~~~~~~a~~~--~~~~a~~~L 369 (490)
T 2xm6_A 294 QYYLAHLYDKGAEGVAKNREQAISWYTKSAEQ--GDATAQANLGAIYFRLGSEEEHKKAVEWFRKAAAK--GEKAAQFNL 369 (490)
T ss_dssp HHHHHHHHHHCBTTBCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHT--TCHHHHHHH
T ss_pred HHHHHHHHHcCCCCCcCCHHHHHHHHHHHHhc--CCHHHHHHHHHHHHhCCCcccHHHHHHHHHHHHHC--CCHHHHHHH
Confidence 34444444444 4555555555555443 23444555555554433 445555555555443 344455555
Q ss_pred HHHHHH----cCChHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 015029 77 ATACMK----LEEYETAKVALEKGASLAPGDSRFTNLIKEFV 114 (414)
Q Consensus 77 g~~~~~----lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~ 114 (414)
|.+|.. .+++++|+.+|+++.+.+ ++.+...++.+.
T Consensus 370 g~~y~~g~g~~~~~~~A~~~~~~A~~~~--~~~a~~~Lg~~y 409 (490)
T 2xm6_A 370 GNALLQGKGVKKDEQQAAIWMRKAAEQG--LSAAQVQLGEIY 409 (490)
T ss_dssp HHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHH
T ss_pred HHHHHcCCCCCCCHHHHHHHHHHHHhCC--CHHHHHHHHHHH
Confidence 555554 445555555555544432 233344444433
No 211
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.40 E-value=1e-05 Score=81.94 Aligned_cols=108 Identities=12% Similarity=-0.014 Sum_probs=87.1
Q ss_pred HHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----ccCHHHHHHHHHHHHHhCCCCHHHH
Q 015029 2 ATDLEKKAKEAFI----DDYFELAYDLYSQAIEISPNSAELFADRAQASIK----LQNFTEAVADANRAIELEPSMSKAY 73 (414)
Q Consensus 2 Ae~~~~~g~~~~~----~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~k----l~~~~~Al~~~~~Ai~l~p~~~~a~ 73 (414)
++.+...|..++. .+++++|+.+|.++++. .++.+++.+|.+|.. .+++++|+.+|++|+.. .++.++
T Consensus 39 ~~a~~~lg~~y~~g~~~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~--~~~~a~ 114 (490)
T 2xm6_A 39 AKAQLELGYRYFQGNETTKDLTQAMDWFRRAAEQ--GYTPAEYVLGLRYMNGEGVPQDYAQAVIWYKKAALK--GLPQAQ 114 (490)
T ss_dssp HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHH
T ss_pred HHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--CCHHHH
Confidence 3456777888888 88899999999888876 578888889998888 88899999999988875 478888
Q ss_pred HHHHHHHHH----cCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 015029 74 WRKATACMK----LEEYETAKVALEKGASLAPGDSRFTNLIKEFVG 115 (414)
Q Consensus 74 ~~~g~~~~~----lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~ 115 (414)
+++|.+|.. .+++++|+.+|+++... .+......++.+..
T Consensus 115 ~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~ 158 (490)
T 2xm6_A 115 QNLGVMYHEGNGVKVDKAESVKWFRLAAEQ--GRDSGQQSMGDAYF 158 (490)
T ss_dssp HHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHH
Confidence 889988888 88889999888888765 35666666766663
No 212
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.32 E-value=6.7e-06 Score=68.88 Aligned_cols=94 Identities=14% Similarity=-0.004 Sum_probs=82.3
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----cCChHHHH
Q 015029 15 DDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK----LEEYETAK 90 (414)
Q Consensus 15 ~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~----lg~y~~A~ 90 (414)
.+++++|+.+|.++.+..... +. +|.+|...+.+++|+.+|++|... .++.+++++|.+|.. .+++.+|+
T Consensus 8 ~~d~~~A~~~~~~aa~~g~~~--a~--lg~~y~~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~ 81 (138)
T 1klx_A 8 KKDLKKAIQYYVKACELNEMF--GC--LSLVSNSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKAA 81 (138)
T ss_dssp HHHHHHHHHHHHHHHHTTCTT--HH--HHHHTCTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHHH
T ss_pred ccCHHHHHHHHHHHHcCCCHh--hh--HHHHHHcCCCHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCCccHHHHH
Confidence 457999999999999987444 34 999999999999999999999987 689999999999999 99999999
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHH
Q 015029 91 VALEKGASLAPGDSRFTNLIKEFVGL 116 (414)
Q Consensus 91 ~~~~~a~~l~p~~~~~~~~l~~~~~~ 116 (414)
.+|+++.+. .+......+..+...
T Consensus 82 ~~~~~Aa~~--g~~~a~~~Lg~~y~~ 105 (138)
T 1klx_A 82 QYYSKACGL--NDQDGCLILGYKQYA 105 (138)
T ss_dssp HHHHHHHHT--TCHHHHHHHHHHHHH
T ss_pred HHHHHHHcC--CCHHHHHHHHHHHHC
Confidence 999999887 567888888887743
No 213
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.29 E-value=3.2e-06 Score=66.27 Aligned_cols=68 Identities=19% Similarity=0.146 Sum_probs=63.0
Q ss_pred HHHHHHHHHHHHHcCC---HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC
Q 015029 2 ATDLEKKAKEAFIDDY---FELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSM 69 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~---y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~ 69 (414)
++.+...|.+++..++ .++|..++.+||.++|+++.+++.+|..++..|+|.+|+..+++++..+|..
T Consensus 6 ~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~ 76 (93)
T 3bee_A 6 ATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPN 76 (93)
T ss_dssp HHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTT
T ss_pred HHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Confidence 4667889999987776 7999999999999999999999999999999999999999999999999873
No 214
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.25 E-value=1.5e-06 Score=88.84 Aligned_cols=103 Identities=11% Similarity=0.006 Sum_probs=87.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCC---CHHHHHHHHHHHHHccCHHHHHHHHHHHHHh-----CCC
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEI-----SPN---SAELFADRAQASIKLQNFTEAVADANRAIEL-----EPS 68 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~-----~P~---~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l-----~p~ 68 (414)
+..+.+.|..+..+|+|++|+.+|.++|.+ .|+ -+..+.++|.+|..+|+|++|+..+++|+.+ +|+
T Consensus 351 a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~ 430 (490)
T 3n71_A 351 LRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPS 430 (490)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTT
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCC
Confidence 566788999999999999999999999987 333 3678999999999999999999999999976 566
Q ss_pred C---HHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCH
Q 015029 69 M---SKAYWRKATACMKLEEYETAKVALEKGASLAPGDS 104 (414)
Q Consensus 69 ~---~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p~~~ 104 (414)
+ ...+-.++.++..++.|++|...|.++.+-.-+|.
T Consensus 431 Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~~~~~~~ 469 (490)
T 3n71_A 431 HPITKDLEAMRMQTEMELRMFRQNEFMYHKMREAALNNQ 469 (490)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 5 45667899999999999999999999876544444
No 215
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.24 E-value=7.4e-06 Score=82.58 Aligned_cols=105 Identities=12% Similarity=0.036 Sum_probs=72.5
Q ss_pred HHHHHHHHHHcC---CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc----cCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 015029 5 LEKKAKEAFIDD---YFELAYDLYSQAIEISPNSAELFADRAQASIKL----QNFTEAVADANRAIELEPSMSKAYWRKA 77 (414)
Q Consensus 5 ~~~~g~~~~~~g---~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl----~~~~~Al~~~~~Ai~l~p~~~~a~~~~g 77 (414)
+...|..+...| ++++|+..|.+++...|..+..++++|.+|... +++++|+..|+++. |.++.+++++|
T Consensus 179 ~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~~~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa---~g~~~a~~~Lg 255 (452)
T 3e4b_A 179 YVELATVYQKKQQPEQQAELLKQMEAGVSRGTVTAQRVDSVARVLGDATLGTPDEKTAQALLEKIA---PGYPASWVSLA 255 (452)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG---GGSTHHHHHHH
T ss_pred HHHHHHHHHHcCCcccHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc---CCCHHHHHHHH
Confidence 455667777777 777777777777777777777767777777554 57777777777776 66777777777
Q ss_pred HH-H--HHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 015029 78 TA-C--MKLEEYETAKVALEKGASLAPGDSRFTNLIKEFV 114 (414)
Q Consensus 78 ~~-~--~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~ 114 (414)
.+ | ...+++++|+.+|+++...+ +..+...++.+.
T Consensus 256 ~~~~~~~~~~d~~~A~~~~~~Aa~~g--~~~A~~~Lg~~y 293 (452)
T 3e4b_A 256 QLLYDFPELGDVEQMMKYLDNGRAAD--QPRAELLLGKLY 293 (452)
T ss_dssp HHHHHSGGGCCHHHHHHHHHHHHHTT--CHHHHHHHHHHH
T ss_pred HHHHhCCCCCCHHHHHHHHHHHHHCC--CHHHHHHHHHHH
Confidence 77 3 35677777777777766544 555566665555
No 216
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.19 E-value=5.6e-06 Score=70.71 Aligned_cols=78 Identities=10% Similarity=0.026 Sum_probs=68.6
Q ss_pred HHHHHHHHHHHHHcC---CHHHHHHHHHHHHHhC-C-CCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 015029 2 ATDLEKKAKEAFIDD---YFELAYDLYSQAIEIS-P-NSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRK 76 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g---~y~~Ai~~y~~AL~~~-P-~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~ 76 (414)
.+..++.|.++.+.+ ++.++|.++...++.+ | ++.++++++|.+|+++++|.+|+++++++++++|++..|...+
T Consensus 32 ~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~ieP~n~QA~~Lk 111 (152)
T 1pc2_A 32 KSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELE 111 (152)
T ss_dssp HHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHH
Confidence 356788899999988 7779999999999998 7 5689999999999999999999999999999999998886654
Q ss_pred HHH
Q 015029 77 ATA 79 (414)
Q Consensus 77 g~~ 79 (414)
-.+
T Consensus 112 ~~i 114 (152)
T 1pc2_A 112 RLI 114 (152)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 217
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=98.17 E-value=7.1e-06 Score=77.34 Aligned_cols=85 Identities=12% Similarity=0.092 Sum_probs=79.2
Q ss_pred HHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHc-----cCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHH-cCChHH
Q 015029 18 FELAYDLYSQAIEISPN--SAELFADRAQASIKL-----QNFTEAVADANRAIELEPSM-SKAYWRKATACMK-LEEYET 88 (414)
Q Consensus 18 y~~Ai~~y~~AL~~~P~--~~~~~~~ra~~~~kl-----~~~~~Al~~~~~Ai~l~p~~-~~a~~~~g~~~~~-lg~y~~ 88 (414)
...|...+.+||+++|+ +..+|..+|..|.++ |+.++|..+|++|++++|+. ..+++.+|..|.. .|+++.
T Consensus 179 l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~~gd~~~ 258 (301)
T 3u64_A 179 VHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCIPLNNRAG 258 (301)
T ss_dssp HHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTTTTCHHH
T ss_pred HHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhcCCHHH
Confidence 57899999999999999 677999999999996 99999999999999999974 9999999999988 599999
Q ss_pred HHHHHHHHHHhCCC
Q 015029 89 AKVALEKGASLAPG 102 (414)
Q Consensus 89 A~~~~~~a~~l~p~ 102 (414)
|...|++++..+|.
T Consensus 259 a~~~L~kAL~a~p~ 272 (301)
T 3u64_A 259 FDEALDRALAIDPE 272 (301)
T ss_dssp HHHHHHHHHHCCGG
T ss_pred HHHHHHHHHcCCCC
Confidence 99999999998876
No 218
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.14 E-value=1e-05 Score=81.48 Aligned_cols=100 Identities=11% Similarity=0.028 Sum_probs=67.5
Q ss_pred HHHHHHHHHc----CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH---HHccCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 015029 6 EKKAKEAFID----DYFELAYDLYSQAIEISPNSAELFADRAQAS---IKLQNFTEAVADANRAIELEPSMSKAYWRKAT 78 (414)
Q Consensus 6 ~~~g~~~~~~----g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~---~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~ 78 (414)
...|..+... +++++|+.+|.+++ |.++.+++++|.+| ...+++++|+.+|++|+..+ ++.+++.+|.
T Consensus 217 ~~Lg~~y~~g~~~~~d~~~A~~~~~~aa---~g~~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~g--~~~A~~~Lg~ 291 (452)
T 3e4b_A 217 DSVARVLGDATLGTPDEKTAQALLEKIA---PGYPASWVSLAQLLYDFPELGDVEQMMKYLDNGRAAD--QPRAELLLGK 291 (452)
T ss_dssp HHHHHHHTCGGGSSCCHHHHHHHHHHHG---GGSTHHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHTT--CHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHCC--CHHHHHHHHH
Confidence 4555555444 57777777777776 66777777777773 34567777777777777543 6777777777
Q ss_pred HHHHcC-----ChHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 015029 79 ACMKLE-----EYETAKVALEKGASLAPGDSRFTNLIKEFV 114 (414)
Q Consensus 79 ~~~~lg-----~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~ 114 (414)
+|. .| ++++|+.+|+++. +.+..+...++.+.
T Consensus 292 ~y~-~G~g~~~d~~~A~~~~~~Aa---~g~~~A~~~Lg~~y 328 (452)
T 3e4b_A 292 LYY-EGKWVPADAKAAEAHFEKAV---GREVAADYYLGQIY 328 (452)
T ss_dssp HHH-HCSSSCCCHHHHHHHHHTTT---TTCHHHHHHHHHHH
T ss_pred HHH-cCCCCCCCHHHHHHHHHHHh---CCCHHHHHHHHHHH
Confidence 776 44 7777777777776 66666666666555
No 219
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=98.08 E-value=9.1e-05 Score=62.11 Aligned_cols=83 Identities=16% Similarity=0.074 Sum_probs=73.9
Q ss_pred CCCHHHHHHHHHHHHHccC---HHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHH
Q 015029 33 PNSAELFADRAQASIKLQN---FTEAVADANRAIELEPS-MSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTN 108 (414)
Q Consensus 33 P~~~~~~~~ra~~~~kl~~---~~~Al~~~~~Ai~l~p~-~~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~ 108 (414)
.-+....+++|.|+.+..+ ..+++..++..+..+|. ..+.+|.+|+.++++|+|..|..+++.+++++|+|.++..
T Consensus 36 ~vs~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~ 115 (144)
T 1y8m_A 36 TATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGA 115 (144)
T ss_dssp TSCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHH
T ss_pred CCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHH
Confidence 4568899999999999864 55799999999999884 6789999999999999999999999999999999999888
Q ss_pred HHHHHHH
Q 015029 109 LIKEFVG 115 (414)
Q Consensus 109 ~l~~~~~ 115 (414)
....++.
T Consensus 116 Lk~~Ie~ 122 (144)
T 1y8m_A 116 LKSMVED 122 (144)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8777773
No 220
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=98.07 E-value=3.9e-05 Score=63.56 Aligned_cols=85 Identities=15% Similarity=0.078 Sum_probs=74.9
Q ss_pred CHHHHHHHHHHHHHccC---HHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHHH
Q 015029 35 SAELFADRAQASIKLQN---FTEAVADANRAIELEPS-MSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLI 110 (414)
Q Consensus 35 ~~~~~~~ra~~~~kl~~---~~~Al~~~~~Ai~l~p~-~~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l 110 (414)
++...++.|.|+.+..+ ...++..++..++.+|. ..+.+|.+|++++++|+|..|..+++.+++++|+|.++....
T Consensus 39 s~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~Lk 118 (134)
T 3o48_A 39 TIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALK 118 (134)
T ss_dssp CHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHHH
T ss_pred ChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHHH
Confidence 57899999999999864 55799999999999984 588999999999999999999999999999999999998888
Q ss_pred HHHHHHHhh
Q 015029 111 KEFVGLLMQ 119 (414)
Q Consensus 111 ~~~~~~~~~ 119 (414)
..++..+..
T Consensus 119 ~~Ie~ki~k 127 (134)
T 3o48_A 119 SMVEDKIQK 127 (134)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 877754433
No 221
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=97.98 E-value=3.1e-05 Score=66.71 Aligned_cols=109 Identities=13% Similarity=0.130 Sum_probs=85.5
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-------
Q 015029 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPNS---------AELFADRAQASIKLQNFTEAVADANRAIELEPS------- 68 (414)
Q Consensus 5 ~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~---------~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~------- 68 (414)
++.+...++..|.|+.|+.+++.++....++ ..++..+|.+++..++|..|...|.+|+.+...
T Consensus 23 l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~ 102 (167)
T 3ffl_A 23 VIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKV 102 (167)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC------
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 6788899999999999999999977764332 348899999999999999999999999866321
Q ss_pred ------------------CHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 015029 69 ------------------MSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKEFV 114 (414)
Q Consensus 69 ------------------~~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~ 114 (414)
..+..|++|.||..++++++|+..++.. ...-..+.+...+++++
T Consensus 103 ~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~I-p~k~Rt~kvnm~LakLy 165 (167)
T 3ffl_A 103 RPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDGI-PSRQRTPKINMLLANLY 165 (167)
T ss_dssp --------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHTS-CGGGCCHHHHHHHHHHC
T ss_pred cccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhcC-CchhcCHHHHHHHHHHh
Confidence 1268899999999999999999987642 22223455666666553
No 222
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=97.97 E-value=9.8e-05 Score=70.64 Aligned_cols=98 Identities=10% Similarity=-0.018 Sum_probs=73.5
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCC--CCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC------CHHHHHHH
Q 015029 5 LEKKAKEAFIDDYFELAYDLYSQAIEISP--NSAELFADRAQASIKLQNFTEAVADANRAIELEPS------MSKAYWRK 76 (414)
Q Consensus 5 ~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P--~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~------~~~a~~~~ 76 (414)
+...|.+++..|++++|+..|.++|..+| .+.+++..++.+|+++|+++.|...++++...+|+ ....++.-
T Consensus 103 ~~~la~i~~~~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~~Lae 182 (310)
T 3mv2_B 103 LYLLATAQAILGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLNNNVSTASTIFDNYTNAIEDTVSGDNEMILNLAE 182 (310)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccccccchHHHHHHHH
Confidence 45677888888888888888888888776 77888888888888888888888888888888872 33333333
Q ss_pred HHHHHHcC--ChHHHHHHHHHHHHhCCC
Q 015029 77 ATACMKLE--EYETAKVALEKGASLAPG 102 (414)
Q Consensus 77 g~~~~~lg--~y~~A~~~~~~a~~l~p~ 102 (414)
|.+.+..| ++.+|...|+.+....|+
T Consensus 183 a~v~l~~g~~~~q~A~~~f~El~~~~p~ 210 (310)
T 3mv2_B 183 SYIKFATNKETATSNFYYYEELSQTFPT 210 (310)
T ss_dssp HHHHHHHTCSTTTHHHHHHHHHHTTSCS
T ss_pred HHHHHHhCCccHHHHHHHHHHHHHhCCC
Confidence 43366556 788888888887777665
No 223
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.95 E-value=6.4e-05 Score=73.85 Aligned_cols=96 Identities=8% Similarity=0.016 Sum_probs=71.3
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-----------------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Q 015029 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNS-----------------AELFADRAQASIKLQNFTEAVADANRAIELE 66 (414)
Q Consensus 4 ~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~-----------------~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~ 66 (414)
....+|..++..|+|.+|++.|.++++..|.. ..++.++|.+|..+|+|++|+..+.+++.+.
T Consensus 6 ~~l~~a~~l~~~~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~ 85 (434)
T 4b4t_Q 6 SKLEEARRLVNEKQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTEYM 85 (434)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 45678999999999999999999999988765 2468899999999999999999999888765
Q ss_pred CCCHH------HHHHHHHHHHHcCChHHHHHHHHHHHHh
Q 015029 67 PSMSK------AYWRKATACMKLEEYETAKVALEKGASL 99 (414)
Q Consensus 67 p~~~~------a~~~~g~~~~~lg~y~~A~~~~~~a~~l 99 (414)
+.... ++..+|.++...|+++.|...++.++..
T Consensus 86 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~ 124 (434)
T 4b4t_Q 86 MQFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEF 124 (434)
T ss_dssp HTSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHH
T ss_pred HHccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Confidence 44322 2333455555556666666666655544
No 224
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.94 E-value=4.5e-05 Score=85.37 Aligned_cols=104 Identities=13% Similarity=0.158 Sum_probs=88.1
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC---------------
Q 015029 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEP--------------- 67 (414)
Q Consensus 3 e~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p--------------- 67 (414)
..+...|..++..|+|++|+.+|..| ..|..+|.+|.++|+|++|+..+.+|.....
T Consensus 1196 ad~~~iGd~le~eg~YeeA~~~Y~kA--------~ny~rLA~tLvkLge~q~AIEaarKA~n~~aWkev~~acve~~Ef~ 1267 (1630)
T 1xi4_A 1196 AHIQQVGDRCYDEKMYDAAKLLYNNV--------SNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFACVDGKEFR 1267 (1630)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHhh--------hHHHHHHHHHHHhCCHHHHHHHHHHhCCHHHHHHHHHHHhhhhHHH
Confidence 35678999999999999999999985 4799999999999999999999998854433
Q ss_pred ----------CCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 015029 68 ----------SMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKEFV 114 (414)
Q Consensus 68 ----------~~~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~ 114 (414)
.+++.+..++..|..+|.|++|+..|+.++.+++.+..+...++.+.
T Consensus 1268 LA~~cgl~Iiv~~deLeeli~yYe~~G~feEAI~LlE~aL~LeraH~gmftELaiLy 1324 (1630)
T 1xi4_A 1268 LAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILY 1324 (1630)
T ss_pred HHHHHHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHHHhccChhHhHHHHHHHHHH
Confidence 14445667788899999999999999999999998887776676666
No 225
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=97.93 E-value=4e-05 Score=73.36 Aligned_cols=99 Identities=8% Similarity=-0.018 Sum_probs=84.0
Q ss_pred HHHHHHcC--CHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHccCHHHHHHHHHHHHHh----------CCCCHHHHH
Q 015029 9 AKEAFIDD--YFELAYDLYSQAIEISPN--SAELFADRAQASIKLQNFTEAVADANRAIEL----------EPSMSKAYW 74 (414)
Q Consensus 9 g~~~~~~g--~y~~Ai~~y~~AL~~~P~--~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l----------~p~~~~a~~ 74 (414)
|.+.+..| ++.+|+..|+++.+..|+ +...+++ |++++|+|++|..+++.++.+ +|.++.++.
T Consensus 183 a~v~l~~g~~~~q~A~~~f~El~~~~p~~~~~~lLln---~~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~~~~~La 259 (310)
T 3mv2_B 183 SYIKFATNKETATSNFYYYEELSQTFPTWKTQLGLLN---LHLQQRNIAEAQGIVELLLSDYYSVEQKENAVLYKPTFLA 259 (310)
T ss_dssp HHHHHHHTCSTTTHHHHHHHHHHTTSCSHHHHHHHHH---HHHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSSHHHHHH
T ss_pred HHHHHHhCCccHHHHHHHHHHHHHhCCCcccHHHHHH---HHHHcCCHHHHHHHHHHHHHhcccccccccCCCCCHHHHH
Confidence 43355555 999999999999888886 4555665 899999999999999988877 588999999
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 015029 75 RKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKE 112 (414)
Q Consensus 75 ~~g~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~ 112 (414)
+++.+.+.+|+ +|.+.+.++..++|+++.+.....+
T Consensus 260 N~i~l~~~lgk--~a~~l~~qL~~~~P~hp~i~d~~~k 295 (310)
T 3mv2_B 260 NQITLALMQGL--DTEDLTNQLVKLDHEHAFIKHHQEI 295 (310)
T ss_dssp HHHHHHHHTTC--TTHHHHHHHHHTTCCCHHHHHHHHH
T ss_pred HHHHHHHHhCh--HHHHHHHHHHHhCCCChHHHHHHHH
Confidence 99999999998 8999999999999999977666544
No 226
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.91 E-value=5.1e-05 Score=74.55 Aligned_cols=96 Identities=11% Similarity=0.076 Sum_probs=59.8
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC----------------------------------------------HH
Q 015029 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNS----------------------------------------------AE 37 (414)
Q Consensus 4 ~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~----------------------------------------------~~ 37 (414)
.+...|..++..|+|++|+.+|.+++...+.. +.
T Consensus 57 al~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 136 (434)
T 4b4t_Q 57 SILELGQLYVTMGAKDKLREFIPHSTEYMMQFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHS 136 (434)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHTHHHHHTSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHH
Confidence 35667777777777777777777766543221 33
Q ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHhC------CCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHh
Q 015029 38 LFADRAQASIKLQNFTEAVADANRAIELE------PSMSKAYWRKATACMKLEEYETAKVALEKGASL 99 (414)
Q Consensus 38 ~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~------p~~~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l 99 (414)
++.++|.+|..+|+|.+|+..+..++..- +....++..+|.+|..+|+|..|...|++++.+
T Consensus 137 ~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~ 204 (434)
T 4b4t_Q 137 LSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTA 204 (434)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 45566666666666666666666666541 223456666666666666666666666666554
No 227
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=97.86 E-value=3e-05 Score=77.69 Aligned_cols=101 Identities=14% Similarity=0.164 Sum_probs=66.9
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC----------------
Q 015029 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEP---------------- 67 (414)
Q Consensus 4 ~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p---------------- 67 (414)
.+...|+.++..|.|++|+.+|+.+ ..|..+|.|+.++|+|++|+..|.+|. ++
T Consensus 124 a~~~IGd~~~~~g~yeeA~~~Y~~a--------~n~~~LA~~L~~Lg~yq~AVea~~KA~--~~~~Wk~v~~aCv~~~ef 193 (449)
T 1b89_A 124 HIQQVGDRCYDEKMYDAAKLLYNNV--------SNFGRLASTLVHLGEYQAAVDGARKAN--STRTWKEVCFACVDGKEF 193 (449)
T ss_dssp -------------CTTTHHHHHHHT--------TCHHHHHHHHHTTTCHHHHHHHHHHHT--CHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHh--------hhHHHHHHHHHHhccHHHHHHHHHHcC--CchhHHHHHHHHHHcCcH
Confidence 4567788888888888888888875 357788888888888888888888882 22
Q ss_pred -----------CCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 015029 68 -----------SMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKEFV 114 (414)
Q Consensus 68 -----------~~~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~ 114 (414)
.++.-...+..+|...|++++|+..|++++.+++.+-.+...++.+.
T Consensus 194 ~lA~~~~l~L~~~ad~l~~lv~~Yek~G~~eEai~lLe~aL~le~ah~~~ftel~il~ 251 (449)
T 1b89_A 194 RLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILY 251 (449)
T ss_dssp HHHHHTTTTTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCHhhHHHHHHHHHHCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHH
Confidence 11222233446788889999999999999999998888777776666
No 228
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=97.77 E-value=0.00013 Score=57.71 Aligned_cols=78 Identities=19% Similarity=0.195 Sum_probs=66.4
Q ss_pred ccccccCCCeEEEEEEeCCCCCCceEEEEeeeEEEEEEEcCCC---------------CeeeecccccccccCCcceEEE
Q 015029 215 RHEFYQKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVPGE---------------EAYHFQPRLFGKIIPAKCRYEV 279 (414)
Q Consensus 215 r~dW~Qt~~~V~i~i~~k~~~~~~v~v~~~~~~l~v~~~~~~~---------------~~y~~~~~L~~~I~p~~s~~~v 279 (414)
++||+++++.+.|.+.++|+.+++|.|.+.++.|.|+...... ..|.-.+.|-..|+++..+.+.
T Consensus 6 ~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~~L~I~g~~~~~~~~~~~~~~~~er~~g~f~r~~~LP~~vd~~~i~A~~ 85 (100)
T 3gla_A 6 RVDIKEEVNHFVLYADLPGIDPSQIEVQMDKGILSIRGERKSESSTETERFSRIERRYGSFHRRFALPDSADADGITAAG 85 (100)
T ss_dssp CEEEEECSSEEEEEEECTTSCGGGCEEEEETTEEEEEEEECCGGGSSGGGEEEECCCCEEEEEEEECCTTBCTTSCEEEE
T ss_pred cEEEEECCCEEEEEEECCCCCHHHEEEEEECCEEEEEEEEcCcCccCCccEEEEeecceEEEEEEECCCCcChHHeEEEE
Confidence 6899999999999999999999999999999999998643211 1366677899999999999999
Q ss_pred eCcEEEEEEeeCC
Q 015029 280 LSTKVEIRLAKAE 292 (414)
Q Consensus 280 ~~~kiei~L~K~~ 292 (414)
...-+.|+|.|..
T Consensus 86 ~~GvL~I~~pK~~ 98 (100)
T 3gla_A 86 RNGVLEIRIPKRP 98 (100)
T ss_dssp ETTEEEEEEEBC-
T ss_pred eCCEEEEEEecCC
Confidence 9999999999974
No 229
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.66 E-value=0.00022 Score=80.03 Aligned_cols=65 Identities=17% Similarity=0.149 Sum_probs=59.6
Q ss_pred CCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCC
Q 015029 33 PNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPG 102 (414)
Q Consensus 33 P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p~ 102 (414)
.+++.+|+++|.++...|++++|+..|.+| +++.+|++.|.++.++|+|++|+++|.++++..+.
T Consensus 1102 vn~p~vWsqLAKAql~~G~~kEAIdsYiKA-----dD~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e 1166 (1630)
T 1xi4_A 1102 CNEPAVWSQLAKAQLQKGMVKEAIDSYIKA-----DDPSSYMEVVQAANTSGNWEELVKYLQMARKKARE 1166 (1630)
T ss_pred cCCHHHHHHHHHHHHhCCCHHHHHHHHHhc-----CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhccc
Confidence 456889999999999999999999999776 78999999999999999999999999999988744
No 230
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=97.64 E-value=0.00032 Score=55.68 Aligned_cols=79 Identities=16% Similarity=0.213 Sum_probs=67.6
Q ss_pred ccccccCCCeEEEEEEeCCCCCCceEEEEeeeEEEEEEEcCCCC----------eeeecccccccccCCcceEEEeCcEE
Q 015029 215 RHEFYQKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVPGEE----------AYHFQPRLFGKIIPAKCRYEVLSTKV 284 (414)
Q Consensus 215 r~dW~Qt~~~V~i~i~~k~~~~~~v~v~~~~~~l~v~~~~~~~~----------~y~~~~~L~~~I~p~~s~~~v~~~ki 284 (414)
.+||+++++.+.|.+.++|+.+++|.|.+.++.|.|+.....+. .|.-.+.|-..|+++..+-+....-+
T Consensus 8 ~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~~L~I~g~~~~~~~~~~~er~~g~f~R~~~LP~~vd~~~i~A~~~~GvL 87 (102)
T 4fei_A 8 AADWRDAGTHLDLLLDVPGVDAGTLALAEDGGQLTVSGERPGTEHLLRSERPSGRFVRELAFPEPVRPASGVASLAGGVL 87 (102)
T ss_dssp CEEEEEETTEEEEEEECTTCCGGGCEEEEETTEEEEEEEECCCSSCSSCCSEEEEEEEEEECSSCBCTTCCEEEEETTEE
T ss_pred cEEEEEcCCEEEEEEECCCCchHhEEEEEECCEEEEEEEEecCCCEEEEEEeccEEEEEEECCCCcchhHcEEEEECCEE
Confidence 68999999999999999999999999999999999986432111 36667789999999999999999999
Q ss_pred EEEEeeCCC
Q 015029 285 EIRLAKAEP 293 (414)
Q Consensus 285 ei~L~K~~~ 293 (414)
.|+|.|..+
T Consensus 88 ~I~lpK~~~ 96 (102)
T 4fei_A 88 TVRFEKLRP 96 (102)
T ss_dssp EEEEEBSSC
T ss_pred EEEEEccCc
Confidence 999999764
No 231
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=97.61 E-value=5.2e-05 Score=62.73 Aligned_cols=81 Identities=16% Similarity=0.323 Sum_probs=69.0
Q ss_pred ccccccCCCeEEEEEEeCCCC--CCceEEEEeeeEEEEEEEcCCCCeeeecccccccc-cCCc--ceEEEeCcEEEEEEe
Q 015029 215 RHEFYQKPEEVVVTVFAKGIP--AKNVTVDFGEQILSVSIDVPGEEAYHFQPRLFGKI-IPAK--CRYEVLSTKVEIRLA 289 (414)
Q Consensus 215 r~dW~Qt~~~V~i~i~~k~~~--~~~v~v~~~~~~l~v~~~~~~~~~y~~~~~L~~~I-~p~~--s~~~v~~~kiei~L~ 289 (414)
||.=.|+++.|+|.|.++.+. ..++.+.++++.|.|+.. +|.+.|.|-|+| ..+. ++|......+.|+|.
T Consensus 5 ~F~itQd~e~viV~Ik~P~~~~~~sdiei~v~~~~F~F~~~-----PYyLRL~LP~~V~e~~~~kA~YD~d~~~~~VtLp 79 (134)
T 2k8q_A 5 RFSITQDEEFIFLKIFISNIRFSAVGLEIIIQENMIIFHLS-----PYYLRLRFPHELIDDERSTAQYDSKDECINVKVA 79 (134)
T ss_dssp EEEEEECSSEEEEEEECCSSCCCSSSCCCEECSSSEEECSS-----SSCEEECCSSCEECCSSCEEEEETTTTEEEEEEE
T ss_pred eEEEEECCCEEEEEEEcCccccCccccEEEEeCCEEEEecC-----CeEEEecCCCeeecCCCcceeEeccCCEEEEEEe
Confidence 678899999999999999988 789999999998888753 699999999999 4444 456666679999999
Q ss_pred eCCC-CCCCccc
Q 015029 290 KAEP-IQWSSLE 300 (414)
Q Consensus 290 K~~~-~~W~~L~ 300 (414)
|..+ +.|+.|.
T Consensus 80 K~~~Ge~F~dLD 91 (134)
T 2k8q_A 80 KLNKNEYFEDLD 91 (134)
T ss_dssp ESSTTCCCSSTT
T ss_pred CCCCCCCCCCcc
Confidence 9976 6899986
No 232
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=97.47 E-value=0.00047 Score=56.68 Aligned_cols=79 Identities=13% Similarity=0.048 Sum_probs=67.7
Q ss_pred ccccccCCCeEEEEEEeCCCCCCceEEEEee-eEEEEEEEcCCC---C--------eeeecccccccccCCcc-eEEEeC
Q 015029 215 RHEFYQKPEEVVVTVFAKGIPAKNVTVDFGE-QILSVSIDVPGE---E--------AYHFQPRLFGKIIPAKC-RYEVLS 281 (414)
Q Consensus 215 r~dW~Qt~~~V~i~i~~k~~~~~~v~v~~~~-~~l~v~~~~~~~---~--------~y~~~~~L~~~I~p~~s-~~~v~~ 281 (414)
.+||+++++.+.|.+.++|+.+++|.|.+.+ +.|.|+...... . .|.-.+.|-..|+++.. +-+...
T Consensus 26 ~~di~e~~~~~~v~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~Er~~~f~R~~~LP~~vd~~~i~~A~~~~ 105 (123)
T 3aab_A 26 PVDMYEEGGYLVVVADLAGFNKEKIKARVSGQNELIIEAEREITEPGVKYLTQRPKYVRKVIRLPYNVAKDAEISGKYEN 105 (123)
T ss_dssp CEEEEEETTEEEEEEECCSCCGGGCEEEEETTTEEEEEEECCCCCCSCEEEECSCSEEEEEEECSSEECTTCCCEEEEET
T ss_pred cEEEEEcCCEEEEEEECCCCCHHHEEEEEeCCCEEEEEEEEeccCCCeEEEEEEeEEEEEEEECCCCcCcchhCeeEEcC
Confidence 5899999999999999999999999999999 999999764321 1 46667789999999988 888888
Q ss_pred cEEEEEEeeCCC
Q 015029 282 TKVEIRLAKAEP 293 (414)
Q Consensus 282 ~kiei~L~K~~~ 293 (414)
.-+.|+|.|...
T Consensus 106 GvL~I~lPK~~~ 117 (123)
T 3aab_A 106 GVLTIRIPIAGT 117 (123)
T ss_dssp TEEEEEEEGGGE
T ss_pred CEEEEEEEcCCC
Confidence 899999999753
No 233
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=97.46 E-value=0.00043 Score=57.02 Aligned_cols=77 Identities=12% Similarity=0.052 Sum_probs=65.3
Q ss_pred HHHHHHHHHHHHcCCHHH---HHHHHHHHHHhC-C-CCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 015029 3 TDLEKKAKEAFIDDYFEL---AYDLYSQAIEIS-P-NSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKA 77 (414)
Q Consensus 3 e~~~~~g~~~~~~g~y~~---Ai~~y~~AL~~~-P-~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g 77 (414)
+..++.|-++.+..+... +|.++...+..+ | ..-++++.+|..|+++|+|.+|+.+++.+++++|++..|.-.+.
T Consensus 36 ~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~n~QA~~Lk~ 115 (126)
T 1nzn_A 36 STQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELER 115 (126)
T ss_dssp HHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 455777888888887766 999999988876 5 46789999999999999999999999999999999988876655
Q ss_pred HH
Q 015029 78 TA 79 (414)
Q Consensus 78 ~~ 79 (414)
.+
T Consensus 116 ~i 117 (126)
T 1nzn_A 116 LI 117 (126)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 234
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=97.43 E-value=0.00063 Score=54.36 Aligned_cols=82 Identities=17% Similarity=0.331 Sum_probs=69.5
Q ss_pred CccccccCCCeEEEEEEeCCCC--CCceEEEEeeeEEEEEEEcCCCCeeeecccccccccCCc---ceEEEeCcEEEEEE
Q 015029 214 YRHEFYQKPEEVVVTVFAKGIP--AKNVTVDFGEQILSVSIDVPGEEAYHFQPRLFGKIIPAK---CRYEVLSTKVEIRL 288 (414)
Q Consensus 214 ~r~dW~Qt~~~V~i~i~~k~~~--~~~v~v~~~~~~l~v~~~~~~~~~y~~~~~L~~~I~p~~---s~~~v~~~kiei~L 288 (414)
++|.=.|+++.|+|.|.++.+. ..++.+.++++.|.|.+. +|.+.|.|-++|.-++ ++|......+.|+|
T Consensus 18 P~F~itQDdefv~I~I~~p~ir~~a~~~ei~vd~~~F~F~~~-----PYyLRL~lP~~vved~~~~A~YD~d~g~~~v~l 92 (115)
T 3eud_A 18 PRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQENMIIFHLS-----PYYLRLRFPHELIDDERSTAQYDSKDECINVKV 92 (115)
T ss_dssp CCEEEEECSSEEEEEEECCSCCCCSSSCEEEEETTEEEEEET-----TEEEEEECSSCEECSTTCEEEEETTTTEEEEEE
T ss_pred CcEEEEECCCEEEEEEEcCceecccCccEEEEeCCEEEEecC-----CeEEEEecCcceecCCCcceEEeCCCcEEEEEE
Confidence 3788899999999999999876 678999999998988874 6999999999995544 37878788999999
Q ss_pred eeCCC-CCCCccc
Q 015029 289 AKAEP-IQWSSLE 300 (414)
Q Consensus 289 ~K~~~-~~W~~L~ 300 (414)
.|..+ +..+.|.
T Consensus 93 pK~~~GE~F~dLD 105 (115)
T 3eud_A 93 AKLNKNEYFEDLD 105 (115)
T ss_dssp EESSTTCCCCCTT
T ss_pred cCCcCCCcCCCcc
Confidence 99986 5788775
No 235
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=97.41 E-value=0.00021 Score=71.69 Aligned_cols=81 Identities=10% Similarity=0.003 Sum_probs=66.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCC---CHHHHHHHHHHHHHccCHHHHHHHHHHHHHh-----CCC
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEI-----SPN---SAELFADRAQASIKLQNFTEAVADANRAIEL-----EPS 68 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~-----~P~---~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l-----~p~ 68 (414)
+..+.+.|..+..+|+|++|+.+|.++|.+ .|+ -+..+.++|.+|..+|+|++|+..+++|+.+ +|+
T Consensus 329 ~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~ 408 (429)
T 3qwp_A 329 LKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGRE 408 (429)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTT
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCC
Confidence 566788999999999999999999999986 233 3678999999999999999999999999977 566
Q ss_pred CHH---HHHHHHHHHHH
Q 015029 69 MSK---AYWRKATACMK 82 (414)
Q Consensus 69 ~~~---a~~~~g~~~~~ 82 (414)
++. .+..++.+...
T Consensus 409 Hp~~~~~~~~l~~~~~e 425 (429)
T 3qwp_A 409 HSLIEDLILLLEECDAN 425 (429)
T ss_dssp SHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHH
Confidence 643 44555555543
No 236
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=97.34 E-value=0.00031 Score=70.46 Aligned_cols=70 Identities=14% Similarity=0.081 Sum_probs=61.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHh-----CCC
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEI--------SPNSAELFADRAQASIKLQNFTEAVADANRAIEL-----EPS 68 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~--------~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l-----~p~ 68 (414)
|..+.+.|..+..+|+|++|+.+|.++|.+ +|+-+..|.++|.+|..+|+|++|+..+++|+.+ +|+
T Consensus 340 a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~~~lG~~ 419 (433)
T 3qww_A 340 LHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGRLYMGLENKAAGEKALKKAIAIMEVAHGKD 419 (433)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTT
T ss_pred HHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHcCCC
Confidence 567788999999999999999999999986 3334678999999999999999999999999976 566
Q ss_pred CHH
Q 015029 69 MSK 71 (414)
Q Consensus 69 ~~~ 71 (414)
++.
T Consensus 420 Hp~ 422 (433)
T 3qww_A 420 HPY 422 (433)
T ss_dssp CHH
T ss_pred ChH
Confidence 654
No 237
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=97.31 E-value=0.0033 Score=61.95 Aligned_cols=96 Identities=16% Similarity=0.045 Sum_probs=82.0
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC----------------------HHHHHHHHHHHHHccCHHHHHHHHH
Q 015029 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS----------------------AELFADRAQASIKLQNFTEAVADAN 60 (414)
Q Consensus 3 e~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~----------------------~~~~~~ra~~~~kl~~~~~Al~~~~ 60 (414)
+.+...|..+...|+...|+..|.+||.+.... ..++..++.+++.+|++.+|+..+.
T Consensus 116 ~~l~~~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~l~ 195 (388)
T 2ff4_A 116 VAEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAELE 195 (388)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 355667777888899999999999999984221 2345567788889999999999999
Q ss_pred HHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHH
Q 015029 61 RAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGAS 98 (414)
Q Consensus 61 ~Ai~l~p~~~~a~~~~g~~~~~lg~y~~A~~~~~~a~~ 98 (414)
.++..+|.+-.+|..+-.+|+..|+..+|+..|+++..
T Consensus 196 ~~~~~~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 196 ALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKT 233 (388)
T ss_dssp HHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998754
No 238
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=97.29 E-value=0.0012 Score=64.45 Aligned_cols=66 Identities=15% Similarity=0.099 Sum_probs=58.7
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHH
Q 015029 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSK 71 (414)
Q Consensus 5 ~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~ 71 (414)
+...|..++..|++++|+.++++||.++|+ ..+|..+|.++...|++++|+..|.+|++++|....
T Consensus 280 ~~alal~~l~~gd~d~A~~~l~rAl~Ln~s-~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~t 345 (372)
T 3ly7_A 280 YQIKAVSALVKGKTDESYQAINTGIDLEMS-WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGANT 345 (372)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcCh
Confidence 444566777899999999999999999974 778899999999999999999999999999997653
No 239
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=97.27 E-value=0.0021 Score=53.11 Aligned_cols=77 Identities=12% Similarity=-0.001 Sum_probs=65.5
Q ss_pred HHHHHHHHHHHHcCCH---HHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 015029 3 TDLEKKAKEAFIDDYF---ELAYDLYSQAIEISPN-SAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKAT 78 (414)
Q Consensus 3 e~~~~~g~~~~~~g~y---~~Ai~~y~~AL~~~P~-~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~ 78 (414)
+..++.|-++.+..+. ..+|.++...+..+|. .-++++.+|..|+++|+|.+|+++++.++++.|++..|.-....
T Consensus 41 qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~Lk~~ 120 (134)
T 3o48_A 41 QSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSM 120 (134)
T ss_dssp HHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHHHHH
T ss_pred hhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHHHHH
Confidence 4567777788887765 4799999999999884 47899999999999999999999999999999999888666554
Q ss_pred H
Q 015029 79 A 79 (414)
Q Consensus 79 ~ 79 (414)
+
T Consensus 121 I 121 (134)
T 3o48_A 121 V 121 (134)
T ss_dssp H
T ss_pred H
Confidence 4
No 240
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=97.26 E-value=0.0013 Score=52.01 Aligned_cols=77 Identities=17% Similarity=0.161 Sum_probs=64.9
Q ss_pred cccccCCCeEEEEEEeCCCCCCceEEEEeeeEEEEEEEcC---CC-----CeeeecccccccccCCcceEEE-eCcEEEE
Q 015029 216 HEFYQKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVP---GE-----EAYHFQPRLFGKIIPAKCRYEV-LSTKVEI 286 (414)
Q Consensus 216 ~dW~Qt~~~V~i~i~~k~~~~~~v~v~~~~~~l~v~~~~~---~~-----~~y~~~~~L~~~I~p~~s~~~v-~~~kiei 286 (414)
.|++++++.+.|.+.++|+.+++|.|.+.++.|.|+.... ++ .+|.-.+.|-..|+++..+-++ ...-+.|
T Consensus 4 vdi~e~~~~~~v~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~i~A~~s~nGvL~I 83 (101)
T 2wj5_A 4 AQVPTDPGYFSVLLDVKHFSPEEISVKVVGDHVEVHARHEERPDEHGFIAREFHRRYRLPPGVDPAAVTSALSPEGVLSI 83 (101)
T ss_dssp CCCCCCSSCEEEEEECTTSCGGGEEEEEETTEEEEEEEEEECSSTTCCEEEEEEEEEECCTTBCTTCCEEEECTTSEEEE
T ss_pred EEEEEeCCEEEEEEECCCCcHHHeEEEEECCEEEEEEEEecccCCCCEEEEEEEEEEECCCCcChhHCEEEECCCCEEEE
Confidence 5899999999999999999999999999999999986432 11 1266677898999999999899 5789999
Q ss_pred EEeeCC
Q 015029 287 RLAKAE 292 (414)
Q Consensus 287 ~L~K~~ 292 (414)
+|.|..
T Consensus 84 ~lPK~~ 89 (101)
T 2wj5_A 84 QATPAS 89 (101)
T ss_dssp EECBCC
T ss_pred EEECCC
Confidence 999964
No 241
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.23 E-value=0.0032 Score=52.67 Aligned_cols=77 Identities=12% Similarity=-0.001 Sum_probs=65.4
Q ss_pred HHHHHHHHHHHHcCCH---HHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 015029 3 TDLEKKAKEAFIDDYF---ELAYDLYSQAIEISPN-SAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKAT 78 (414)
Q Consensus 3 e~~~~~g~~~~~~g~y---~~Ai~~y~~AL~~~P~-~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~ 78 (414)
+..++.|-++.+..+- .++|.++...+...|. .-++++.+|..|+++|+|.+|+++++.+++++|++..|.-.+..
T Consensus 40 ~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~Lk~~ 119 (144)
T 1y8m_A 40 QSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSM 119 (144)
T ss_dssp HHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHHHHHH
Confidence 4567778888887765 4799999999998884 56899999999999999999999999999999999887655444
Q ss_pred H
Q 015029 79 A 79 (414)
Q Consensus 79 ~ 79 (414)
+
T Consensus 120 I 120 (144)
T 1y8m_A 120 V 120 (144)
T ss_dssp H
T ss_pred H
Confidence 3
No 242
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=97.21 E-value=0.0013 Score=56.07 Aligned_cols=80 Identities=19% Similarity=0.233 Sum_probs=66.4
Q ss_pred CccccccCCCeEEEEEEeCCCCCCceEEEEe-eeEEEEEEEcCC-----C----------CeeeecccccccccCCcceE
Q 015029 214 YRHEFYQKPEEVVVTVFAKGIPAKNVTVDFG-EQILSVSIDVPG-----E----------EAYHFQPRLFGKIIPAKCRY 277 (414)
Q Consensus 214 ~r~dW~Qt~~~V~i~i~~k~~~~~~v~v~~~-~~~l~v~~~~~~-----~----------~~y~~~~~L~~~I~p~~s~~ 277 (414)
+++||+++++.+.|.+.++|+.+++|.|.+. ++.|.|+..... + ..|.-.+.|-..|+++..+-
T Consensus 44 p~~di~e~~d~~~v~~dlPGv~kedI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~i~A 123 (151)
T 1gme_A 44 ARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVEEVKA 123 (151)
T ss_dssp GCEEEEECSSEEEEEEECTTCCGGGEEEEEETTTEEEEEECCCCCCCCTTCEEEECCCCCCCEEEEEECSSCCCGGGCEE
T ss_pred CceEEEEcCCEEEEEEECCCCChHHEEEEEecCCEEEEEEEEccccccCCceEEEEeEeccEEEEEEECCCCccccceEE
Confidence 4689999999999999999999999999995 578999864321 1 13566778989999999888
Q ss_pred EEeCcEEEEEEeeCCC
Q 015029 278 EVLSTKVEIRLAKAEP 293 (414)
Q Consensus 278 ~v~~~kiei~L~K~~~ 293 (414)
+....-+.|+|.|...
T Consensus 124 ~~~nGvL~I~lPK~~~ 139 (151)
T 1gme_A 124 GLENGVLTVTVPKAEV 139 (151)
T ss_dssp EEETTEEEEEEECCCC
T ss_pred EEECCEEEEEEEccCc
Confidence 8888999999999753
No 243
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=97.17 E-value=0.0017 Score=61.17 Aligned_cols=83 Identities=14% Similarity=0.061 Sum_probs=68.7
Q ss_pred CCCCHHHHHHHHHHHHH---c--------cCHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHc-----CChHHHHHHH
Q 015029 32 SPNSAELFADRAQASIK---L--------QNFTEAVADANRAIELEPS--MSKAYWRKATACMKL-----EEYETAKVAL 93 (414)
Q Consensus 32 ~P~~~~~~~~ra~~~~k---l--------~~~~~Al~~~~~Ai~l~p~--~~~a~~~~g~~~~~l-----g~y~~A~~~~ 93 (414)
+|+++.+++-.|.+... . +....|...+++|++++|. +..+|..+|..|..+ |+.+.|.++|
T Consensus 148 ~~~dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~f 227 (301)
T 3u64_A 148 TRVDVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAF 227 (301)
T ss_dssp CGGGHHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHH
T ss_pred CccccHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHH
Confidence 56678888888777755 1 2467899999999999999 677999999999996 9999999999
Q ss_pred HHHHHhCCCC-HHHHHHHHHHH
Q 015029 94 EKGASLAPGD-SRFTNLIKEFV 114 (414)
Q Consensus 94 ~~a~~l~p~~-~~~~~~l~~~~ 114 (414)
++++.++|+. ......+++..
T Consensus 228 erAL~LnP~~~id~~v~YA~~l 249 (301)
T 3u64_A 228 EHLTRYCSAHDPDHHITYADAL 249 (301)
T ss_dssp HHHHHHCCTTCSHHHHHHHHHT
T ss_pred HHHHHhCCCCCchHHHHHHHHH
Confidence 9999999974 76666666544
No 244
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=97.07 E-value=0.0022 Score=55.16 Aligned_cols=78 Identities=12% Similarity=0.145 Sum_probs=66.6
Q ss_pred cccccCCCeEEEEEEeCCCCCCceEEEEeeeEEEEEEEcCC-----C-----------CeeeecccccccccCCcceEEE
Q 015029 216 HEFYQKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVPG-----E-----------EAYHFQPRLFGKIIPAKCRYEV 279 (414)
Q Consensus 216 ~dW~Qt~~~V~i~i~~k~~~~~~v~v~~~~~~l~v~~~~~~-----~-----------~~y~~~~~L~~~I~p~~s~~~v 279 (414)
+|++++++.+.|.+.++|+.+++|.|.+.++.|.|+..... + ..|.-.+.|-..|+++..+-+.
T Consensus 59 vdi~e~~~~~~v~~dlPG~~~edi~V~~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~~g~f~R~~~LP~~vd~~~i~A~~ 138 (161)
T 4eld_A 59 ISIIEGDQHIKVIAWLPGVNKEDIILNAVGDTLEIRAKRSPLMITESERIIYSEIPEEEEIYRTIKLPATVKEENASAKF 138 (161)
T ss_dssp EEEEECSSEEEEEEECTTCCGGGEEEEEETTEEEEEEECCCCCCCSSCEEEEECSCCCCEEEEEEECSSCBCGGGCEEEE
T ss_pred eeEEEeCCEEEEEEECCCCChHhEEEEEECCEEEEEEEEcccccCCCceEEEEEeeccccEEEEEECCCCcccccEEEEE
Confidence 79999999999999999999999999999999999865332 1 1355667898999999988888
Q ss_pred eCcEEEEEEeeCCC
Q 015029 280 LSTKVEIRLAKAEP 293 (414)
Q Consensus 280 ~~~kiei~L~K~~~ 293 (414)
...-++|+|-|...
T Consensus 139 ~nGvL~I~lpK~~~ 152 (161)
T 4eld_A 139 ENGVLSVILPKAES 152 (161)
T ss_dssp ETTEEEEEEEBCGG
T ss_pred ECCEEEEEEEcCCC
Confidence 88899999999653
No 245
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=96.98 E-value=0.00059 Score=68.28 Aligned_cols=84 Identities=14% Similarity=0.097 Sum_probs=31.0
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---------------------------CHHHHHHHHHHHHHccCHHHHHH
Q 015029 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPN---------------------------SAELFADRAQASIKLQNFTEAVA 57 (414)
Q Consensus 5 ~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~---------------------------~~~~~~~ra~~~~kl~~~~~Al~ 57 (414)
+...+..+...|+|++|+.+|..+++..++ +...+.++|.+++..|+|++|+.
T Consensus 64 y~~V~~~ae~~g~~EeAi~yl~~ark~~~~~~i~~~Li~~Y~Klg~l~e~e~f~~~pn~~a~~~IGd~~~~~g~yeeA~~ 143 (449)
T 1b89_A 64 YMEVVQAANTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQVGDRCYDEKMYDAAKL 143 (449)
T ss_dssp ---------------------------------------------CHHHHTTTTTCC----------------CTTTHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHhCccchhHHHHHHHHHHhCCHHHHHHHHcCCcHHHHHHHHHHHHHcCCHHHHHH
Confidence 344455566667777777766666653221 12356666666667777777777
Q ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHH
Q 015029 58 DANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKG 96 (414)
Q Consensus 58 ~~~~Ai~l~p~~~~a~~~~g~~~~~lg~y~~A~~~~~~a 96 (414)
+|..+ ..|.++|.|+.++|+|++|+++|+++
T Consensus 144 ~Y~~a--------~n~~~LA~~L~~Lg~yq~AVea~~KA 174 (449)
T 1b89_A 144 LYNNV--------SNFGRLASTLVHLGEYQAAVDGARKA 174 (449)
T ss_dssp HHHHT--------TCHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred HHHHh--------hhHHHHHHHHHHhccHHHHHHHHHHc
Confidence 77655 46788899999999999999999888
No 246
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=96.95 E-value=0.0087 Score=63.34 Aligned_cols=114 Identities=12% Similarity=0.106 Sum_probs=87.5
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHh-----------CCC-----------CHHHHHHHHHHHHHccCHHHHHHHHHHHH
Q 015029 6 EKKAKEAFIDDYFELAYDLYSQAIEI-----------SPN-----------SAELFADRAQASIKLQNFTEAVADANRAI 63 (414)
Q Consensus 6 ~~~g~~~~~~g~y~~Ai~~y~~AL~~-----------~P~-----------~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai 63 (414)
...+......|+++.|..+|.++|.. .|. ...+|+..+.+..+.++.+.|...|.+|+
T Consensus 382 l~~a~~ee~~~~~e~aR~iyek~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~A~ 461 (679)
T 4e6h_A 382 FSLSEQYELNTKIPEIETTILSCIDRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGKCR 461 (679)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 45566777789999999999999875 253 34578888888888899999999999999
Q ss_pred Hh-CCCCHHHHHHHHHHHHHcCC-hHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhh
Q 015029 64 EL-EPSMSKAYWRKATACMKLEE-YETAKVALEKGASLAPGDSRFTNLIKEFVGLLMQ 119 (414)
Q Consensus 64 ~l-~p~~~~a~~~~g~~~~~lg~-y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~ 119 (414)
.. .+.....|...|..-+..++ ++.|...|+.+++..|.+..+...+.+....++.
T Consensus 462 ~~~~~~~~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~~~~~w~~y~~fe~~~~~ 519 (679)
T 4e6h_A 462 RLKKLVTPDIYLENAYIEYHISKDTKTACKVLELGLKYFATDGEYINKYLDFLIYVNE 519 (679)
T ss_dssp HTGGGSCTHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTC
T ss_pred HhcCCCChHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHhCCC
Confidence 87 54566788888888777765 8999999999999999888776555554443333
No 247
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=96.89 E-value=0.0085 Score=63.42 Aligned_cols=131 Identities=5% Similarity=-0.031 Sum_probs=97.0
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHcc-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 015029 5 LEKKAKEAFIDDYFELAYDLYSQAIEI-SPNSAELFADRAQASIKLQ-NFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (414)
Q Consensus 5 ~~~~g~~~~~~g~y~~Ai~~y~~AL~~-~P~~~~~~~~ra~~~~kl~-~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~ 82 (414)
+...++...+.|+.+.|..+|.+|++. .+....+|...|....+.+ +++.|...|++++...|+++..+...+.....
T Consensus 437 Wi~y~~~erR~~~l~~AR~vf~~A~~~~~~~~~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~~~~~w~~y~~fe~~ 516 (679)
T 4e6h_A 437 YCVYMNTMKRIQGLAASRKIFGKCRRLKKLVTPDIYLENAYIEYHISKDTKTACKVLELGLKYFATDGEYINKYLDFLIY 516 (679)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHHTGGGSCTHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHh
Confidence 444555666788999999999999997 4445677777777666665 49999999999999999999998888988889
Q ss_pred cCChHHHHHHHHHHHHhCCC---CHHHHHHHHHHHHHHhhhhhhhhhHHHHHhhhc
Q 015029 83 LEEYETAKVALEKGASLAPG---DSRFTNLIKEFVGLLMQNAVYLCWNYELLRRVG 135 (414)
Q Consensus 83 lg~y~~A~~~~~~a~~l~p~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (414)
.|+.+.|...|++++...|+ ...+.....+.+...+....+..........+.
T Consensus 517 ~~~~~~AR~lferal~~~~~~~~~~~lw~~~~~fE~~~G~~~~~~~v~~R~~~~~P 572 (679)
T 4e6h_A 517 VNEESQVKSLFESSIDKISDSHLLKMIFQKVIFFESKVGSLNSVRTLEKRFFEKFP 572 (679)
T ss_dssp HTCHHHHHHHHHHHTTTSSSTTHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHST
T ss_pred CCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 99999999999999998884 333444455555444444444444444444333
No 248
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=96.83 E-value=0.0039 Score=49.72 Aligned_cols=77 Identities=13% Similarity=0.166 Sum_probs=64.7
Q ss_pred ccccCCCeEEEEEEeCCCCCCceEEEEeeeEEEEEEEcC---CC-----CeeeecccccccccCCcceEEE-eCcEEEEE
Q 015029 217 EFYQKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVP---GE-----EAYHFQPRLFGKIIPAKCRYEV-LSTKVEIR 287 (414)
Q Consensus 217 dW~Qt~~~V~i~i~~k~~~~~~v~v~~~~~~l~v~~~~~---~~-----~~y~~~~~L~~~I~p~~s~~~v-~~~kiei~ 287 (414)
+++++++.+.|.+.++|+.+++|.|.+.++.|.|+.... ++ ..|.-.+.|-..|+++..+-.+ ...-+.|+
T Consensus 6 ~i~e~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~i~A~~s~~GvL~I~ 85 (106)
T 3l1e_A 6 EVRSDRDKFVIFLDVKHFSPEDLTVKVQEDFVEIHGKHNERQDDHGYISREFHRRYRLPSNVDQSALSCSLSADGMLTFS 85 (106)
T ss_dssp EEEECSSEEEEEEECTTSCGGGEEEEEETTEEEEEEEEEEEETTTEEEEEEEEEEEECCTTBCTTSCEEEECTTSEEEEE
T ss_pred EEEEcCCEEEEEEECCCCChHHEEEEEECCEEEEEEEEccccCCCCEEEEEEEEEEECCCCcChhHcEEEECCCCEEEEE
Confidence 789999999999999999999999999999999986321 11 2366677899999999998888 67899999
Q ss_pred EeeCCC
Q 015029 288 LAKAEP 293 (414)
Q Consensus 288 L~K~~~ 293 (414)
|-|..+
T Consensus 86 ~PK~~~ 91 (106)
T 3l1e_A 86 GPKIPS 91 (106)
T ss_dssp EEBCCC
T ss_pred EEccCc
Confidence 999754
No 249
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=96.77 E-value=0.0049 Score=52.98 Aligned_cols=78 Identities=18% Similarity=0.095 Sum_probs=59.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC---CCC----------------------HHHHHHHHHHHHHccCHHHHH
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEIS---PNS----------------------AELFADRAQASIKLQNFTEAV 56 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~---P~~----------------------~~~~~~ra~~~~kl~~~~~Al 56 (414)
++.+...|+.+|..++|..|+..|.+||+.. +.+ .++.+.+|.||++++++.+|+
T Consensus 63 ~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai 142 (167)
T 3ffl_A 63 YQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAI 142 (167)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC--------------------CCCCHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHH
Confidence 4567889999999999999999999998762 111 268899999999999999999
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHH
Q 015029 57 ADANRAIELEPSMSKAYWRKATAC 80 (414)
Q Consensus 57 ~~~~~Ai~l~p~~~~a~~~~g~~~ 80 (414)
...+..-. ....++..+.+|..|
T Consensus 143 ~~Le~Ip~-k~Rt~kvnm~LakLy 165 (167)
T 3ffl_A 143 AILDGIPS-RQRTPKINMLLANLY 165 (167)
T ss_dssp HHHHTSCG-GGCCHHHHHHHHHHC
T ss_pred HHHhcCCc-hhcCHHHHHHHHHHh
Confidence 87654321 223677777777665
No 250
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=96.68 E-value=0.012 Score=44.82 Aligned_cols=73 Identities=7% Similarity=0.096 Sum_probs=61.1
Q ss_pred ccCCCeEEEEEEeCCCCCCceEEEEeeeEEEEEEEcCC-----C---CeeeecccccccccCCcceEEEe-CcEEEEEEe
Q 015029 219 YQKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVPG-----E---EAYHFQPRLFGKIIPAKCRYEVL-STKVEIRLA 289 (414)
Q Consensus 219 ~Qt~~~V~i~i~~k~~~~~~v~v~~~~~~l~v~~~~~~-----~---~~y~~~~~L~~~I~p~~s~~~v~-~~kiei~L~ 289 (414)
.++++.+.|.+.++|+.+++|.|.+.++.|.|+..... + ..|.-.+.|-..|+++..+-++. ..-+.|+|-
T Consensus 3 ~E~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~~F~R~~~LP~~vd~~~i~A~~~~~GvL~I~lP 82 (85)
T 3q9p_A 3 SHTADRWRVSLDVNHFAPDELTVKTKDGVVEITGKHAARQDEHGYISRCFTRKYTLPPGVDPTQVSSSLSPEGTLTVEAP 82 (85)
T ss_dssp CCCCCEEEEEEECTTTCCSEEEEEEETTEEEEEEEEC-------CCCEEEEEEEECCTTCCGGGCEEEECTTSEEEEEEE
T ss_pred cCcCCEEEEEEECCCCChHHEEEEEECCEEEEEEEEccccCCCCEEEEEEEEEEECCCCcChHHcEEEECCCCEEEEEEE
Confidence 47889999999999999999999999999999864321 1 24667788999999999999998 778999998
Q ss_pred eC
Q 015029 290 KA 291 (414)
Q Consensus 290 K~ 291 (414)
|.
T Consensus 83 K~ 84 (85)
T 3q9p_A 83 MP 84 (85)
T ss_dssp CC
T ss_pred cC
Confidence 84
No 251
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=96.63 E-value=0.039 Score=46.60 Aligned_cols=110 Identities=15% Similarity=0.017 Sum_probs=87.3
Q ss_pred HHHHHHHHHHHcCCH------HHHHHHHHHHHHhCCCC--------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC
Q 015029 4 DLEKKAKEAFIDDYF------ELAYDLYSQAIEISPNS--------AELFADRAQASIKLQNFTEAVADANRAIELEPSM 69 (414)
Q Consensus 4 ~~~~~g~~~~~~g~y------~~Ai~~y~~AL~~~P~~--------~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~ 69 (414)
.+......+-+.|+. +.-++.|.+|+..-|-. ..+++..| .+..+++.++|...|+.|+.+...+
T Consensus 15 ~W~~yl~llE~~g~p~~d~~l~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA-~~~ei~D~d~aR~vy~~a~~~hKkF 93 (161)
T 4h7y_A 15 DWLSLLLKLEKNSVPLSDALLNKLIGRYSQAIEALPPDKYGQNESFARIQVRFA-ELKAIQEPDDARDYFQMARANCKKF 93 (161)
T ss_dssp HHHHHHHHHHHHTCSCCHHHHHHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHH-HHHHHHCGGGCHHHHHHHHHHCTTB
T ss_pred HHHHHHHHHHHcCCCchhhHHHHHHHHHHHHHHcCCccccccHHHHHHHHHHHH-HHHHhcCHHHHHHHHHHHHHHhHHH
Confidence 344555566666887 88889999999987754 34555555 3456799999999999999998889
Q ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHH-HHHHH
Q 015029 70 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNL-IKEFV 114 (414)
Q Consensus 70 ~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~-l~~~~ 114 (414)
++.|...|.--.+.|+...|...+.+++.+.|...++... +..++
T Consensus 94 AKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k~~~~le~a~~nl~ 139 (161)
T 4h7y_A 94 AFVHISFAQFELSQGNVKKSKQLLQKAVERGAVPLEMLEIALRNLN 139 (161)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHhccCCCcHHHHHHHHHhhh
Confidence 9999999999999999999999999999999987764433 44333
No 252
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=96.45 E-value=0.0066 Score=46.78 Aligned_cols=73 Identities=10% Similarity=0.135 Sum_probs=57.5
Q ss_pred cCCCeEEEEEEeCCCCCCceEEEEeeeEEEEEEEcC----CC----CeeeecccccccccCCcceEEE-eCcEEEEEEee
Q 015029 220 QKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVP----GE----EAYHFQPRLFGKIIPAKCRYEV-LSTKVEIRLAK 290 (414)
Q Consensus 220 Qt~~~V~i~i~~k~~~~~~v~v~~~~~~l~v~~~~~----~~----~~y~~~~~L~~~I~p~~s~~~v-~~~kiei~L~K 290 (414)
.+++.+.|++.++|+.+++|.|.+.++.|.|+.... ++ ..|.-.+.|-..|+++..+-++ ...-+.|+|.|
T Consensus 3 ~~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~ef~R~~~LP~~vd~~~i~A~~~~~GvL~I~~pK 82 (90)
T 2y1y_A 3 MEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKYRIPADVDPLTITSSMSSDGVLTVNGPR 82 (90)
T ss_dssp ---CCEEEEEECTTSCGGGEEEEEETTEEEEEEEEEEEECSSSEEEEEEEEEEECCTTBCGGGCEEEECTTSEEEEEECB
T ss_pred cCCCEEEEEEECCCCcHHHeEEEEECCEEEEEEEEecccCCCCEEEEEEEEEEECCCCcChhHcEEEECCCCEEEEEEEc
Confidence 467889999999999999999999999999886422 11 1366677898999999988888 67889999998
Q ss_pred CC
Q 015029 291 AE 292 (414)
Q Consensus 291 ~~ 292 (414)
..
T Consensus 83 ~~ 84 (90)
T 2y1y_A 83 KQ 84 (90)
T ss_dssp C-
T ss_pred CC
Confidence 64
No 253
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=96.38 E-value=0.0075 Score=64.26 Aligned_cols=78 Identities=18% Similarity=0.269 Sum_probs=63.9
Q ss_pred HHHHHHHHHHHHh--------CCCC----------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 015029 19 ELAYDLYSQAIEI--------SPNS----------AELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATAC 80 (414)
Q Consensus 19 ~~Ai~~y~~AL~~--------~P~~----------~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~ 80 (414)
-+|+.+..++|+. .+.+ ..++..-+..++..|+|+-|+.++++|+.+.|.....|++|+.||
T Consensus 302 v~av~ll~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vY 381 (754)
T 4gns_B 302 LDMITILNETLDPLLSLLNDLPPRDADSARLMNCMSDLLNIQTNFLLNRGDYELALGVSNTSTELALDSFESWYNLARCH 381 (754)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhhhhhcccccccccccCcchHHHHHHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHH
Confidence 4677777777642 2222 335555677778889999999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHHH
Q 015029 81 MKLEEYETAKVALEKG 96 (414)
Q Consensus 81 ~~lg~y~~A~~~~~~a 96 (414)
..+|+|+.|+-.+.-|
T Consensus 382 i~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 382 IKKEEYEKALFAINSM 397 (754)
T ss_dssp HHTTCHHHHHHHHHHS
T ss_pred HHhccHHHHHHHHhcC
Confidence 9999999999877765
No 254
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=96.14 E-value=0.011 Score=51.50 Aligned_cols=78 Identities=12% Similarity=0.144 Sum_probs=61.8
Q ss_pred cccccCCCeEEEEEEeCCCCCCceEEEEeeeEEEEEEEcCC---C-----CeeeecccccccccCCcceEEE-eCcEEEE
Q 015029 216 HEFYQKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVPG---E-----EAYHFQPRLFGKIIPAKCRYEV-LSTKVEI 286 (414)
Q Consensus 216 ~dW~Qt~~~V~i~i~~k~~~~~~v~v~~~~~~l~v~~~~~~---~-----~~y~~~~~L~~~I~p~~s~~~v-~~~kiei 286 (414)
.|++++++.+.|.+.++|+.+++|.|++.++.|.|+..... + .+|.-.+.|-..|+++..+-++ ...-+.|
T Consensus 66 ~dv~e~~d~~~v~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~reF~R~~~LP~~Vd~~~i~A~~s~dGvL~I 145 (175)
T 2klr_A 66 SEMRLEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKYRIPADVDPLTITSSLSSDGVLTV 145 (175)
T ss_dssp ---CCCCSEEEEEECCSSCCGGGEEEEEETTEEEEEEEEEEEEETTEEEEEEEEEEEECTTTCCTTTCEEEECTTSCEEE
T ss_pred eEEEEcCCeEEEEEECCCCChHHEEEEEECCEEEEEEEEcccccCCceEEEEEEEEEECCCCcChhHeEEEEcCCCEEEE
Confidence 48899999999999999999999999999999998864321 1 1366677899999999999888 5788999
Q ss_pred EEeeCCC
Q 015029 287 RLAKAEP 293 (414)
Q Consensus 287 ~L~K~~~ 293 (414)
+|-|...
T Consensus 146 ~lPK~~~ 152 (175)
T 2klr_A 146 NGPRKQV 152 (175)
T ss_dssp EEECC--
T ss_pred EEECCCC
Confidence 9999653
No 255
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=95.67 E-value=0.26 Score=49.85 Aligned_cols=102 Identities=11% Similarity=-0.096 Sum_probs=69.7
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH---------------------------------------
Q 015029 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQA--------------------------------------- 45 (414)
Q Consensus 5 ~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~--------------------------------------- 45 (414)
+...+..+...|+.+.|...|.+|+.. |.+..+++..+..
T Consensus 216 W~~ya~~~~~~~~~~~ar~i~erAi~~-P~~~~l~~~y~~~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lw~~y~~ 294 (493)
T 2uy1_A 216 YFFYSEYLIGIGQKEKAKKVVERGIEM-SDGMFLSLYYGLVMDEEAVYGDLKRKYSMGEAESAEKVFSKELDLLRINHLN 294 (493)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH-CCSSHHHHHHHHHTTCTHHHHHHHHHTC----------CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhC-CCcHHHHHHHHhhcchhHHHHHHHHHHHhhccchhhhhcccccHHHHHHHHH
Confidence 455666777788888888888888888 8875444333221
Q ss_pred -HHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC-ChHHHHHHHHHHHHhCCCCHHHHH
Q 015029 46 -SIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLE-EYETAKVALEKGASLAPGDSRFTN 108 (414)
Q Consensus 46 -~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~lg-~y~~A~~~~~~a~~l~p~~~~~~~ 108 (414)
+.+.+.++.|...|++| ...+.....|...|..-+.++ +++.|...|+.+++..|+++.+..
T Consensus 295 ~~~r~~~~~~AR~i~~~A-~~~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~~~~~~ 358 (493)
T 2uy1_A 295 YVLKKRGLELFRKLFIEL-GNEGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPDSTLLKE 358 (493)
T ss_dssp HHHHHHCHHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHcCCHHHHHHHHHHh-hCCCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCCHHHHH
Confidence 22355677788888888 333335566666677666666 588888888888888887776533
No 256
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=95.61 E-value=0.21 Score=43.05 Aligned_cols=95 Identities=9% Similarity=-0.013 Sum_probs=74.0
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHH--h--C-------------CCCH
Q 015029 8 KAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIE--L--E-------------PSMS 70 (414)
Q Consensus 8 ~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~--l--~-------------p~~~ 70 (414)
.+-.+|-.|.|..|+-++. .-+.....+..+.||.++++|..|+.+++..+. . + |.+-
T Consensus 39 ~~I~LyyngEY~R~Lf~L~-----~lNT~Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~Dk 113 (242)
T 3kae_A 39 MSIVLYLNGEYTRALFHLH-----KLNTCTSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDARIQEMFVDPGDE 113 (242)
T ss_dssp HHHHHHHTTCHHHHHHHHH-----TCCBHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTCH
T ss_pred hhhhhhhcchHhHHHHHHH-----hcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcccccccceeeeccchH
Confidence 4567788888888887763 345577788889999999999999999999993 2 2 2233
Q ss_pred H-HHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHH
Q 015029 71 K-AYWRKATACMKLEEYETAKVALEKGASLAPGDSRFT 107 (414)
Q Consensus 71 ~-a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~ 107 (414)
+ .+..+|.++...|+-++|+..|.+.....|--+.+.
T Consensus 114 EfFy~l~a~lltq~g~r~EaI~y~~~Sf~~~~lf~~vE 151 (242)
T 3kae_A 114 EFFESLLGDLCTLSGYREEGIGHYVRSFGKSFLFSPVE 151 (242)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHhhhHhhhhcCCccccchHH
Confidence 3 455689999999999999999999998888655444
No 257
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=95.60 E-value=0.045 Score=52.13 Aligned_cols=79 Identities=15% Similarity=0.108 Sum_probs=67.2
Q ss_pred ccccccCCC----eEEEEEEeCCCCCCceEEEEeeeEEEEEEEcCC----C---CeeeecccccccccCCcceEEEe-Cc
Q 015029 215 RHEFYQKPE----EVVVTVFAKGIPAKNVTVDFGEQILSVSIDVPG----E---EAYHFQPRLFGKIIPAKCRYEVL-ST 282 (414)
Q Consensus 215 r~dW~Qt~~----~V~i~i~~k~~~~~~v~v~~~~~~l~v~~~~~~----~---~~y~~~~~L~~~I~p~~s~~~v~-~~ 282 (414)
..|.+.+++ .+.|++-++|+.+++|.|++.++.|.|+..... + ..|.-.+.|-..|+++..+-++. ..
T Consensus 100 ~vDi~E~~~dgk~~~~v~~dlPG~~~edI~V~v~~~~L~I~ge~~~~~e~~r~~g~F~R~~~LP~~Vd~e~i~A~~~~nG 179 (314)
T 2bol_A 100 LKDAYEVGKDGRLHFKVYFNVKNFKAEEITIKADKNKLVVRAQKSVACGDAAMSESVGRSIPLPPSVDRNHIQATITTDD 179 (314)
T ss_dssp GGGCEEECTTSSEEEEEEEECTTCCTTTEEEEEETTEEEEEECCBSSTTCCCBCCCEEEEEECCTTBCGGGCEEEECSSS
T ss_pred ccceEEcCCCCceEEEEEEECCCCchHHeEEEEECCEEEEEEEEeccCCCCEEEEEEEEEEECCCCccccccEEEEeCCC
Confidence 568899999 899999999999999999999999999864321 1 24777788999999999999998 78
Q ss_pred EEEEEEeeCCC
Q 015029 283 KVEIRLAKAEP 293 (414)
Q Consensus 283 kiei~L~K~~~ 293 (414)
-+.|+|.|..+
T Consensus 180 VL~I~lPK~~~ 190 (314)
T 2bol_A 180 VLVIEAPVNEP 190 (314)
T ss_dssp EEEEEEEBSSC
T ss_pred EEEEEEeccCc
Confidence 99999999765
No 258
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=94.97 E-value=0.065 Score=57.09 Aligned_cols=55 Identities=20% Similarity=0.239 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHH
Q 015029 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVAD 58 (414)
Q Consensus 4 ~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~ 58 (414)
-+..++..+...|+|+-|+.+-.+|+...|.....|+.++.||+.+|+|+.|+-.
T Consensus 339 LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e~ALLt 393 (754)
T 4gns_B 339 LLNIQTNFLLNRGDYELALGVSNTSTELALDSFESWYNLARCHIKKEEYEKALFA 393 (754)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHHHHHHH
Confidence 3556788899999999999999999999999999999999999999999999844
No 259
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=94.86 E-value=0.26 Score=48.45 Aligned_cols=92 Identities=13% Similarity=0.031 Sum_probs=75.3
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCC--C----HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC---C----CHHHH
Q 015029 7 KKAKEAFIDDYFELAYDLYSQAIEISPN--S----AELFADRAQASIKLQNFTEAVADANRAIELEP---S----MSKAY 73 (414)
Q Consensus 7 ~~g~~~~~~g~y~~Ai~~y~~AL~~~P~--~----~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p---~----~~~a~ 73 (414)
..|..++..|+|.+|+..+.+.++.... + .+.+......|..++++..+...+..|..... . .+...
T Consensus 104 kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~~p~i~a~i~ 183 (394)
T 3txn_A 104 RLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKVQGALD 183 (394)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCCCHHHHHHHH
Confidence 6799999999999999999999886322 1 56788889999999999999999998876541 2 24456
Q ss_pred HHHHHHHH-HcCChHHHHHHHHHHHH
Q 015029 74 WRKATACM-KLEEYETAKVALEKGAS 98 (414)
Q Consensus 74 ~~~g~~~~-~lg~y~~A~~~~~~a~~ 98 (414)
..-|..+. ..++|..|...|-.++.
T Consensus 184 ~~~Gi~~l~~~rdyk~A~~~F~eaf~ 209 (394)
T 3txn_A 184 LQSGILHAADERDFKTAFSYFYEAFE 209 (394)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHHHHHH
T ss_pred HHhhHHHHHhccCHHHHHHHHHHHHh
Confidence 66888899 89999999999888864
No 260
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=94.86 E-value=0.34 Score=44.80 Aligned_cols=62 Identities=24% Similarity=0.240 Sum_probs=58.0
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCH
Q 015029 9 AKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMS 70 (414)
Q Consensus 9 g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~ 70 (414)
...+++.|+.++|++.....|+.+|.|+.....+-..+.-.|+|+.|+.-++.+..++|...
T Consensus 4 ~~~ll~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~ 65 (273)
T 1zbp_A 4 WKNALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYL 65 (273)
T ss_dssp HHHHTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGH
T ss_pred HHHHHhCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhh
Confidence 35688999999999999999999999999999999999999999999999999999999753
No 261
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=94.72 E-value=0.6 Score=47.09 Aligned_cols=108 Identities=10% Similarity=0.003 Sum_probs=80.2
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcc-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Q 015029 6 EKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQ-NFTEAVADANRAIELEPSMSKAYWRKATACMKLE 84 (414)
Q Consensus 6 ~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~-~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~lg 84 (414)
...+....+.++.+.|...|.+| ...+.....|...|..-+..+ +++.|...|+.++...|+.+..+...+.....+|
T Consensus 290 ~~y~~~~~r~~~~~~AR~i~~~A-~~~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~~~~~~~yid~e~~~~ 368 (493)
T 2uy1_A 290 INHLNYVLKKRGLELFRKLFIEL-GNEGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPDSTLLKEEFFLFLLRIG 368 (493)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHh-hCCCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcC
Confidence 34445555678899999999999 433335667777777777666 6999999999999999999888888888888999
Q ss_pred ChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHh
Q 015029 85 EYETAKVALEKGASLAPGDSRFTNLIKEFVGLLM 118 (414)
Q Consensus 85 ~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~ 118 (414)
+.+.|...|+++ +....+.......+...+
T Consensus 369 ~~~~aR~l~er~----~k~~~lw~~~~~fE~~~G 398 (493)
T 2uy1_A 369 DEENARALFKRL----EKTSRMWDSMIEYEFMVG 398 (493)
T ss_dssp CHHHHHHHHHHS----CCBHHHHHHHHHHHHHHS
T ss_pred CHHHHHHHHHHH----HHHHHHHHHHHHHHHHCC
Confidence 999999999987 233444444444443333
No 262
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=94.12 E-value=1 Score=45.55 Aligned_cols=99 Identities=14% Similarity=0.080 Sum_probs=73.2
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcC
Q 015029 7 KKAKEAFIDDYFELAYDLYSQAIEIS-PNSAELFADRAQASIKLQNFTEAVADANRAIELEPS-MSKAYWRKATACMKLE 84 (414)
Q Consensus 7 ~~g~~~~~~g~y~~Ai~~y~~AL~~~-P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~-~~~a~~~~g~~~~~lg 84 (414)
..-..+.+.|++++|+.+|.+..... .-+...|..+-.+|.+.|++++|...|+.....+-. +...|..+-.+|.+.|
T Consensus 110 ~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd~~ty~~Li~~~~~~g 189 (501)
T 4g26_A 110 NGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDADKAYEVDAHMVESEVVPEEPELAALLKVSMDTK 189 (501)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHHCCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhCC
Confidence 34456778888888888888877642 224667777778888888888888888888776532 5667777888888888
Q ss_pred ChHHHHHHHHHHHHh--CCCCHH
Q 015029 85 EYETAKVALEKGASL--APGDSR 105 (414)
Q Consensus 85 ~y~~A~~~~~~a~~l--~p~~~~ 105 (414)
++++|.+.|++.... .|+...
T Consensus 190 ~~d~A~~ll~~Mr~~g~~ps~~T 212 (501)
T 4g26_A 190 NADKVYKTLQRLRDLVRQVSKST 212 (501)
T ss_dssp CHHHHHHHHHHHHHHTSSBCHHH
T ss_pred CHHHHHHHHHHHHHhCCCcCHHH
Confidence 888888888887654 454443
No 263
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=93.87 E-value=0.11 Score=51.75 Aligned_cols=97 Identities=5% Similarity=-0.042 Sum_probs=78.8
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC---C---CHHHHHH
Q 015029 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPNS---AELFADRAQASIKLQNFTEAVADANRAIELEP---S---MSKAYWR 75 (414)
Q Consensus 5 ~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~---~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p---~---~~~a~~~ 75 (414)
+...|..++..|+++.|+..|.++....... ..++.....+++..+++..+...+.+|-.+-. + .......
T Consensus 134 ~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~~~~~~lk~~ 213 (429)
T 4b4t_R 134 WINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWERRNRYKTY 213 (429)
T ss_dssp CHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCTHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCHHHHHHHHHH
Confidence 4678999999999999999999988864333 67888888899999999999999999977632 1 1345666
Q ss_pred HHHHHHHcCChHHHHHHHHHHHHhCC
Q 015029 76 KATACMKLEEYETAKVALEKGASLAP 101 (414)
Q Consensus 76 ~g~~~~~lg~y~~A~~~~~~a~~l~p 101 (414)
.|.++...++|..|...|-.++.-..
T Consensus 214 ~gl~~l~~r~f~~Aa~~f~e~~~t~~ 239 (429)
T 4b4t_R 214 YGIHCLAVRNFKEAAKLLVDSLATFT 239 (429)
T ss_dssp HHHGGGGTSCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHhChHHHHHHHHHHHhccCC
Confidence 78888999999999999988765443
No 264
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=93.83 E-value=0.27 Score=49.84 Aligned_cols=77 Identities=10% Similarity=-0.000 Sum_probs=64.6
Q ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 015029 38 LFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKEFV 114 (414)
Q Consensus 38 ~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~ 114 (414)
++..+|........+..|..+|.+|+.+.|.++.+|.++|++....|++-+|+.+|.+++-...-.+.+...+..+-
T Consensus 154 ~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~f 230 (497)
T 1ya0_A 154 CLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKAL 230 (497)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHH
T ss_pred HHHHcccHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhcccccHHHHHHHHHHHhcCCCChhHHHHHHHHH
Confidence 55666777777778899999999999999999999999999999999999999999999877666666666665544
No 265
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=93.64 E-value=0.28 Score=49.77 Aligned_cols=79 Identities=15% Similarity=0.076 Sum_probs=71.5
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 015029 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (414)
Q Consensus 4 ~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~ 82 (414)
-+...|+.+-....+..|..+|.+|+.+.|++...|..+|..+...++.-+|+.+|-+++....-.+.|.-++...+-.
T Consensus 154 ~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~f~~ 232 (497)
T 1ya0_A 154 CLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSK 232 (497)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHHHH
T ss_pred HHHHcccHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhcccccHHHHHHHHHHHhcCCCChhHHHHHHHHHHH
Confidence 3567889999999999999999999999999999999999999999999999999999998877788888888887764
No 266
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=93.25 E-value=0.47 Score=43.88 Aligned_cols=69 Identities=13% Similarity=0.061 Sum_probs=61.3
Q ss_pred HHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 015029 44 QASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKE 112 (414)
Q Consensus 44 ~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~ 112 (414)
..+++.+++.+|+..+...|+.+|.+......+...|.-.|+++.|...++.+.+++|........+..
T Consensus 5 ~~ll~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~~a~~yr~ 73 (273)
T 1zbp_A 5 KNALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQLRH 73 (273)
T ss_dssp HHHTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHHHHHHH
T ss_pred HHHHhCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhHHHHHHHH
Confidence 356678999999999999999999999999999999999999999999999999999987765444433
No 267
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=91.88 E-value=4 Score=41.12 Aligned_cols=93 Identities=10% Similarity=0.083 Sum_probs=74.0
Q ss_pred CCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHcCChHHHHHHH
Q 015029 16 DYFELAYDLYSQAIEIS-PNSAELFADRAQASIKLQNFTEAVADANRAIELEP-SMSKAYWRKATACMKLEEYETAKVAL 93 (414)
Q Consensus 16 g~y~~Ai~~y~~AL~~~-P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p-~~~~a~~~~g~~~~~lg~y~~A~~~~ 93 (414)
++.+.|.++|.+..... .-|...|..+-.+|.+.|++++|+..|+.....+- -+...|.-+-.+|.+.|++++|...|
T Consensus 84 ~~l~~A~~lf~~M~~~G~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~~g~~~~A~~l~ 163 (501)
T 4g26_A 84 PGLSRGFDIFKQMIVDKVVPNEATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDADKAYEVD 163 (501)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHHCCCHHHHHHHH
Confidence 34788999999877652 23567888899999999999999999999887653 26778888889999999999999999
Q ss_pred HHHHHh--CCCCHHHHH
Q 015029 94 EKGASL--APGDSRFTN 108 (414)
Q Consensus 94 ~~a~~l--~p~~~~~~~ 108 (414)
...... .|+...+..
T Consensus 164 ~~M~~~G~~Pd~~ty~~ 180 (501)
T 4g26_A 164 AHMVESEVVPEEPELAA 180 (501)
T ss_dssp HHHHHTTCCCCHHHHHH
T ss_pred HHHHhcCCCCCHHHHHH
Confidence 998764 454444333
No 268
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=91.47 E-value=0.73 Score=44.98 Aligned_cols=60 Identities=12% Similarity=-0.002 Sum_probs=54.6
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q 015029 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIE 64 (414)
Q Consensus 5 ~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~ 64 (414)
+...+..++..|++.+|+..+..++..+|-+-.++..+-.+|+..|+..+|+..|.++.+
T Consensus 174 ~~~~~~~~l~~g~~~~a~~~l~~~~~~~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 174 HTAKAEAEIACGRASAVIAELEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKT 233 (388)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 345677788999999999999999999999999999999999999999999999988765
No 269
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=91.30 E-value=3.2 Score=41.16 Aligned_cols=94 Identities=12% Similarity=0.102 Sum_probs=74.3
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHccCHHHHHHHHHHHHH---hCCCC----HHH
Q 015029 6 EKKAKEAFIDDYFELAYDLYSQAIEISPNS------AELFADRAQASIKLQNFTEAVADANRAIE---LEPSM----SKA 72 (414)
Q Consensus 6 ~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~------~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~---l~p~~----~~a 72 (414)
...+..++..|+|.+|...+.......-.. .+++..-...|+..++|..|...+.++-. -.+.. ...
T Consensus 141 ~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~~~lk~~~ 220 (445)
T 4b4t_P 141 KDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKYESLKLEY 220 (445)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCCHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCcHHHHHHH
Confidence 567899999999999999998876542221 56778888899999999999999988742 23333 346
Q ss_pred HHHHHHHHHHcCChHHHHHHHHHHHHh
Q 015029 73 YWRKATACMKLEEYETAKVALEKGASL 99 (414)
Q Consensus 73 ~~~~g~~~~~lg~y~~A~~~~~~a~~l 99 (414)
+...|..+...++|.+|-.+|..++..
T Consensus 221 ~~~~~~~~~~e~~y~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 221 YNLLVKISLHKREYLEVAQYLQEIYQT 247 (445)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 677899999999999999999888753
No 270
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=90.87 E-value=1.2 Score=37.59 Aligned_cols=73 Identities=15% Similarity=-0.005 Sum_probs=60.5
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC
Q 015029 12 AFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEE 85 (414)
Q Consensus 12 ~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~lg~ 85 (414)
+...+|.++|-+.|+.++..+...+.+|+..|..-++.|++..|...+.+|+.+.|... -.+..|+.-...|.
T Consensus 70 ~~ei~D~d~aR~vy~~a~~~hKkFAKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k~~-~~le~a~~nl~~~~ 142 (161)
T 4h7y_A 70 LKAIQEPDDARDYFQMARANCKKFAFVHISFAQFELSQGNVKKSKQLLQKAVERGAVPL-EMLEIALRNLNLQK 142 (161)
T ss_dssp HHHHHCGGGCHHHHHHHHHHCTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBCH-HHHHHHHHHHHTTC
T ss_pred HHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcccHHHHHHHHHHHhccCCCcH-HHHHHHHHhhhcCC
Confidence 35568999999999999999888899999999999999999999999999999998653 44555555555554
No 271
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=90.80 E-value=1.9 Score=45.21 Aligned_cols=80 Identities=18% Similarity=0.089 Sum_probs=44.2
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHH--------hCCCCHHHHHHHHHHH
Q 015029 9 AKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIE--------LEPSMSKAYWRKATAC 80 (414)
Q Consensus 9 g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~--------l~p~~~~a~~~~g~~~ 80 (414)
...++..|+++.|++.. ...++...|.++|..+++.++++.|..+|.++=. ....+.+.+.+++...
T Consensus 659 f~~~l~~~~~~~A~~~~-----~~~~~~~~W~~la~~al~~~~~~~A~~~y~~~~d~~~l~~l~~~~~~~~~~~~~~~~a 733 (814)
T 3mkq_A 659 FELALKVGQLTLARDLL-----TDESAEMKWRALGDASLQRFNFKLAIEAFTNAHDLESLFLLHSSFNNKEGLVTLAKDA 733 (814)
T ss_dssp HHHHHHHTCHHHHHHHH-----TTCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred eehhhhcCCHHHHHHHH-----HhhCcHhHHHHHHHHHHHcCCHHHHHHHHHHccChhhhHHHHHHcCCHHHHHHHHHHH
Confidence 33444555555555543 2335667778888888888888888877776421 1123444444444444
Q ss_pred HHcCChHHHHHHH
Q 015029 81 MKLEEYETAKVAL 93 (414)
Q Consensus 81 ~~lg~y~~A~~~~ 93 (414)
...|++..|..+|
T Consensus 734 ~~~~~~~~A~~~~ 746 (814)
T 3mkq_A 734 ETTGKFNLAFNAY 746 (814)
T ss_dssp HHTTCHHHHHHHH
T ss_pred HHcCchHHHHHHH
Confidence 4444444444333
No 272
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=90.44 E-value=1.3 Score=38.32 Aligned_cols=55 Identities=15% Similarity=0.001 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHH
Q 015029 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAI 63 (414)
Q Consensus 4 ~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai 63 (414)
+...+...+...|+++.|++..... ++...|..+|...+..|+++-|..||.++=
T Consensus 7 D~~~rF~LAL~lg~l~~A~e~a~~l-----~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~ 61 (177)
T 3mkq_B 7 DPHIRFDLALEYGNLDAALDEAKKL-----NDSITWERLIQEALAQGNASLAEMIYQTQH 61 (177)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHH-----CCHHHHHHHHHHHHHTTCHHHHHHHHHHTT
T ss_pred ChHHHHHHHHhcCCHHHHHHHHHHh-----CCHHHHHHHHHHHHHcCChHHHHHHHHHhC
Confidence 3456778899999999999987653 577899999999999999999999887754
No 273
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=90.00 E-value=8.7 Score=33.08 Aligned_cols=87 Identities=16% Similarity=0.069 Sum_probs=65.0
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 015029 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (414)
Q Consensus 3 e~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~ 82 (414)
+++.-.-...++-.+|+.|+-+-.- +-|.+++....++..++-.|.|..|+-.+ ..-+-.-+.|..+.||..
T Consensus 3 ~~~~~kI~Ks~kY~dYdt~~fLsa~---L~~~~~eY~lL~~I~LyyngEY~R~Lf~L-----~~lNT~Ts~YYk~LCy~k 74 (242)
T 3kae_A 3 SKLIGKICKSIRYRDYETAIFLAAC---LLPCKPEYRMLMSIVLYLNGEYTRALFHL-----HKLNTCTSKYYESLCYKK 74 (242)
T ss_dssp CTHHHHHHHHHHTTCHHHHHHHHHH---HC----CTHHHHHHHHHHTTCHHHHHHHH-----HTCCBHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcccccHHHHHHHH---HccCChHHHhhhhhhhhhcchHhHHHHHH-----HhcchHHHHHHHHHHHHH
Confidence 3444555667888999988754322 34555677888899999999999987544 234567788999999999
Q ss_pred cCChHHHHHHHHHHH
Q 015029 83 LEEYETAKVALEKGA 97 (414)
Q Consensus 83 lg~y~~A~~~~~~a~ 97 (414)
+.+|..|+.+++..+
T Consensus 75 lKdYkkA~~~le~il 89 (242)
T 3kae_A 75 KKDYKKAIKSLESIL 89 (242)
T ss_dssp TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999999988
No 274
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=89.56 E-value=1.7 Score=48.59 Aligned_cols=91 Identities=10% Similarity=-0.035 Sum_probs=72.7
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHh-----------------------CCCCHHHHHHHHHHHHHccCHHHHHHHHHHH
Q 015029 6 EKKAKEAFIDDYFELAYDLYSQAIEI-----------------------SPNSAELFADRAQASIKLQNFTEAVADANRA 62 (414)
Q Consensus 6 ~~~g~~~~~~g~y~~Ai~~y~~AL~~-----------------------~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~A 62 (414)
+-.|.+++..|++++|..+|.+|-.. ....+.+|......+.+.+.++.++..+..|
T Consensus 846 yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~lA 925 (1139)
T 4fhn_B 846 YLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLA 925 (1139)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTSCCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 66899999999999999999876211 0112467788888888999999999999999
Q ss_pred HHhCCC-CH----HHHHHHHHHHHHcCChHHHHHHHHHH
Q 015029 63 IELEPS-MS----KAYWRKATACMKLEEYETAKVALEKG 96 (414)
Q Consensus 63 i~l~p~-~~----~a~~~~g~~~~~lg~y~~A~~~~~~a 96 (414)
|+..+. .. ..|.++..++..+|+|++|-..+...
T Consensus 926 i~~~~~~~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL~~~ 964 (1139)
T 4fhn_B 926 DASKETDDEDLSIAITHETLKTACAAGKFDAAHVALMVL 964 (1139)
T ss_dssp HHHCCSCCHHHHHHHHHHHHHHHHHHCCSGGGGHHHHHH
T ss_pred HHhccCCChhhHHHHHHHHHHHHHhhCCHHHHHHHHHhC
Confidence 988653 22 36889999999999999998777543
No 275
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=84.81 E-value=2.7 Score=39.75 Aligned_cols=71 Identities=11% Similarity=-0.012 Sum_probs=56.2
Q ss_pred CCCeEEEEEEe-CCCCCCceEEEEeeeEEEEEEEcCCCC-----------eeeecccccccccCCcceEEEeCcEEEEEE
Q 015029 221 KPEEVVVTVFA-KGIPAKNVTVDFGEQILSVSIDVPGEE-----------AYHFQPRLFGKIIPAKCRYEVLSTKVEIRL 288 (414)
Q Consensus 221 t~~~V~i~i~~-k~~~~~~v~v~~~~~~l~v~~~~~~~~-----------~y~~~~~L~~~I~p~~s~~~v~~~kiei~L 288 (414)
++..+.|.+.+ +|+.+++|.|++.++.|+|+....... .|.=.+.|-..|+++..+-+....-+.|+|
T Consensus 231 ~~~~~~v~~~ldPG~~~edi~V~v~~~~LtI~ge~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~i~A~~~dGvL~i~~ 310 (314)
T 2bol_A 231 GSKKIHLELKVDPHFAPKDVKVWAKGNKVYVHGVTGKEEKTENASHSEHREFYKAFVTPEVVDASKTQAEIVDGLMVVEA 310 (314)
T ss_dssp SCEEEEEEEECCTTCCGGGEEEEESSSEEEEEEEEC------------CEEEEEEEECSSEECGGGCEEEEETTEEEEEE
T ss_pred CCcEEEEEEEcCCCCChHHeEEEEECCEEEEEEEEeccCCceEEEEEeeeEEEEEEECCCCcChHHeEEEEeCCEEEEEE
Confidence 45578888888 999999999999999999986432111 255567788999999988888888888888
Q ss_pred eeC
Q 015029 289 AKA 291 (414)
Q Consensus 289 ~K~ 291 (414)
-|.
T Consensus 311 Pk~ 313 (314)
T 2bol_A 311 PLF 313 (314)
T ss_dssp EEE
T ss_pred ecC
Confidence 774
No 276
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=84.22 E-value=4.3 Score=30.34 Aligned_cols=30 Identities=30% Similarity=0.226 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEI 31 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~ 31 (414)
|-.+..+|..+-..|+|.+|+.+|..||+.
T Consensus 19 Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~ 48 (83)
T 2w2u_A 19 ARKYAINAVKADKEGNAEEAITNYKKAIEV 48 (83)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 445677777777888888888877777664
No 277
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=83.90 E-value=4.6 Score=30.12 Aligned_cols=30 Identities=30% Similarity=0.233 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEI 31 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~ 31 (414)
|-.+..+|..+-..|+|.+|+.+|..||+.
T Consensus 11 Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~ 40 (83)
T 2v6y_A 11 ARKYAILAVKADKEGKVEDAITYYKKAIEV 40 (83)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 345667777777788888888877777664
No 278
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=83.86 E-value=11 Score=39.27 Aligned_cols=79 Identities=16% Similarity=0.046 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Q 015029 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKL 83 (414)
Q Consensus 4 ~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~l 83 (414)
.+...|..+...++++.|+..|.++= + +..+..+|..+++.+........+...+. . .....+++.+
T Consensus 683 ~W~~la~~al~~~~~~~A~~~y~~~~-----d---~~~l~~l~~~~~~~~~~~~~~~~a~~~~~-~----~~A~~~~~~~ 749 (814)
T 3mkq_A 683 KWRALGDASLQRFNFKLAIEAFTNAH-----D---LESLFLLHSSFNNKEGLVTLAKDAETTGK-F----NLAFNAYWIA 749 (814)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHT-----C---HHHHHHHHHHTTCHHHHHHHHHHHHHTTC-H----HHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHcc-----C---hhhhHHHHHHcCCHHHHHHHHHHHHHcCc-h----HHHHHHHHHc
Confidence 46788999999999999999998741 1 11222333335555544444444443221 1 1112234445
Q ss_pred CChHHHHHHHHH
Q 015029 84 EEYETAKVALEK 95 (414)
Q Consensus 84 g~y~~A~~~~~~ 95 (414)
|++++|++.|..
T Consensus 750 g~~~~a~~~~~~ 761 (814)
T 3mkq_A 750 GDIQGAKDLLIK 761 (814)
T ss_dssp TCHHHHHHHHHH
T ss_pred CCHHHHHHHHHH
Confidence 566655555543
No 279
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=82.88 E-value=17 Score=39.96 Aligned_cols=96 Identities=14% Similarity=0.005 Sum_probs=75.4
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHH----hCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC-CCHHHHHHHHHH
Q 015029 5 LEKKAKEAFIDDYFELAYDLYSQAIE----ISPNSAELFADRAQASIKLQNFTEAVADANRAIELEP-SMSKAYWRKATA 79 (414)
Q Consensus 5 ~~~~g~~~~~~g~y~~Ai~~y~~AL~----~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p-~~~~a~~~~g~~ 79 (414)
+...-+.+.+.|+.++|..+|....+ ...-|...|..+-..|.+.|++++|+..|+.....+- -+.-.|.-+-.+
T Consensus 130 ynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~PDvvTYntLI~g 209 (1134)
T 3spa_A 130 LLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTPDLLSYAAALQC 209 (1134)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHH
Confidence 44455688999999999999976432 1234577888899999999999999999999987753 266777777788
Q ss_pred HHHcCCh-HHHHHHHHHHHHhC
Q 015029 80 CMKLEEY-ETAKVALEKGASLA 100 (414)
Q Consensus 80 ~~~lg~y-~~A~~~~~~a~~l~ 100 (414)
+.+.|+. ++|...|+......
T Consensus 210 lcK~G~~~e~A~~Ll~EM~~kG 231 (1134)
T 3spa_A 210 MGRQDQDAGTIERCLEQMSQEG 231 (1134)
T ss_dssp HHHHTCCHHHHHHHHHHHHHHT
T ss_pred HHhCCCcHHHHHHHHHHHHHcC
Confidence 9999985 68888888876543
No 280
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=81.15 E-value=19 Score=35.05 Aligned_cols=79 Identities=15% Similarity=0.133 Sum_probs=61.4
Q ss_pred HHHHHHHHHccCHHHHHHHHHHHHHh----CC--CCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhC---CCCHHHHHHH
Q 015029 40 ADRAQASIKLQNFTEAVADANRAIEL----EP--SMSKAYWRKATACMKLEEYETAKVALEKGASLA---PGDSRFTNLI 110 (414)
Q Consensus 40 ~~ra~~~~kl~~~~~Al~~~~~Ai~l----~p--~~~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l~---p~~~~~~~~l 110 (414)
..+|..|+..|+|.+|+..+.+...- +. ...+.|..-...|+.++++..+...|.++.... +.++.+...+
T Consensus 103 ~kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~~p~i~a~i 182 (394)
T 3txn_A 103 ARLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKVQGAL 182 (394)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHH
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCCCHHHHHHH
Confidence 37899999999999999999888864 21 246788888999999999999999999987654 3567666666
Q ss_pred HHHHHHHh
Q 015029 111 KEFVGLLM 118 (414)
Q Consensus 111 ~~~~~~~~ 118 (414)
..|.+.+.
T Consensus 183 ~~~~Gi~~ 190 (394)
T 3txn_A 183 DLQSGILH 190 (394)
T ss_dssp HHHHHHHH
T ss_pred HHHhhHHH
Confidence 66665443
No 281
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=79.29 E-value=3 Score=42.22 Aligned_cols=69 Identities=13% Similarity=0.021 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC-----CCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCH
Q 015029 36 AELFADRAQASIKLQNFTEAVADANRAIELEP-----SMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDS 104 (414)
Q Consensus 36 ~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p-----~~~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p~~~ 104 (414)
+.++..+-..|+..+.|++|.....++.-... .....+|++|+++...++|.+|.++|..|++..|.+.
T Consensus 231 a~l~nllLRnYL~~~~y~qA~~lvsk~~fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~~~ 304 (523)
T 4b4t_S 231 AMLINLILRDFLNNGEVDSASDFISKLEYPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHNS 304 (523)
T ss_dssp HHHHHHHHHHHHHSSCSTTHHHHHHHHCSCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSCSS
T ss_pred HHHHHHHHHHHHccCcHHHHHHHHhcCcCCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcch
Confidence 45666677788889999999999999863221 1256788899999999999999999999999887543
No 282
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=78.79 E-value=8.5 Score=31.93 Aligned_cols=33 Identities=12% Similarity=0.015 Sum_probs=17.7
Q ss_pred CCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHh
Q 015029 67 PSMSKAYWRKATACMKLEEYETAKVALEKGASL 99 (414)
Q Consensus 67 p~~~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l 99 (414)
+-++..++.+|.+|.++|+..+|.+.+.+|.+.
T Consensus 122 ~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~k 154 (172)
T 1wy6_A 122 EVSASILVAIANALRRVGDERDATTLLIEACKK 154 (172)
T ss_dssp CSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred CCChHHHHHHHHHHHHhcchhhHHHHHHHHHHh
Confidence 334555555555555555555555555555443
No 283
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=76.98 E-value=3.6 Score=31.00 Aligned_cols=30 Identities=23% Similarity=0.299 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEI 31 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~ 31 (414)
|..+..+|..+-..|+|++|+.+|..||+.
T Consensus 16 A~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ 45 (86)
T 4a5x_A 16 AATVLKRAVELDSESRYPQALVCYQEGIDL 45 (86)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 345666777777777777777777776653
No 284
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=76.34 E-value=7.3 Score=28.32 Aligned_cols=35 Identities=17% Similarity=0.240 Sum_probs=27.6
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Q 015029 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELF 39 (414)
Q Consensus 5 ~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~ 39 (414)
....|..+..+|++++|+.+|..||...|+-..++
T Consensus 20 eV~~GE~L~~~g~~~~~~~hf~nAl~Vc~qP~~LL 54 (73)
T 3ax2_A 20 EIQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLL 54 (73)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHcCCHHHHH
Confidence 35678888888888888888888888888765544
No 285
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=75.70 E-value=6.3 Score=33.95 Aligned_cols=56 Identities=14% Similarity=0.162 Sum_probs=45.5
Q ss_pred CCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHH
Q 015029 34 NSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGA 97 (414)
Q Consensus 34 ~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~lg~y~~A~~~~~~a~ 97 (414)
.++...+.+| +.+|+++.|+..++.. ++...|-++|......|+++-|.+||.++-
T Consensus 6 ~D~~~rF~LA---L~lg~l~~A~e~a~~l-----~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~ 61 (177)
T 3mkq_B 6 QDPHIRFDLA---LEYGNLDAALDEAKKL-----NDSITWERLIQEALAQGNASLAEMIYQTQH 61 (177)
T ss_dssp SCHHHHHHHH---HHTTCHHHHHHHHHHH-----CCHHHHHHHHHHHHHTTCHHHHHHHHHHTT
T ss_pred CChHHHHHHH---HhcCCHHHHHHHHHHh-----CCHHHHHHHHHHHHHcCChHHHHHHHHHhC
Confidence 3455555544 5779999999887654 678899999999999999999999999853
No 286
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=74.96 E-value=28 Score=32.79 Aligned_cols=103 Identities=15% Similarity=0.101 Sum_probs=62.4
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCC----CC------HHHHHHHHHHHHHccCHHHHHH-----HHHHHHHh----
Q 015029 5 LEKKAKEAFIDDYFELAYDLYSQAIEISP----NS------AELFADRAQASIKLQNFTEAVA-----DANRAIEL---- 65 (414)
Q Consensus 5 ~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P----~~------~~~~~~ra~~~~kl~~~~~Al~-----~~~~Ai~l---- 65 (414)
..+.|..++..|++.+|+..|..+|..-| ++ ..-++..+.-|+--=+.+.+.+ +-.+.++|
T Consensus 117 ~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icrEYilal~iEl~Rr~l~~~~~kR~lELAAYF 196 (325)
T 3mv2_A 117 KMNEGYKNFKLNKPDIAIECFREAIYRITLLMVDDAEDEKLAHKILETAREYILGLSIELERRSLKEGNTVRMLELAAYF 196 (325)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCCBCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTCHHHHHHHHHHG
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHhheeeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHh
Confidence 46789999999999999999999988743 21 1123333333321111111111 12233333
Q ss_pred -----CCCCHHHHHHHHH-HHHHcCChHHHHHHHHHHHHhCCCCHHHH
Q 015029 66 -----EPSMSKAYWRKAT-ACMKLEEYETAKVALEKGASLAPGDSRFT 107 (414)
Q Consensus 66 -----~p~~~~a~~~~g~-~~~~lg~y~~A~~~~~~a~~l~p~~~~~~ 107 (414)
.|.+...-+|.|+ ..++.++|..|..+.++.+++.|..+.+.
T Consensus 197 T~c~LQp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~~~~a~ 244 (325)
T 3mv2_A 197 TKAKLSPIHRTNALQVAMSQHFKHKNFLQASYFAGEFLKIISSGPRAE 244 (325)
T ss_dssp GGSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSHHHH
T ss_pred ccCCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCHHHHH
Confidence 2223233334444 47889999999999999999999766443
No 287
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=73.99 E-value=46 Score=31.30 Aligned_cols=100 Identities=17% Similarity=0.169 Sum_probs=61.4
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCC----CC------HHHHHHHHHHHHHccCHHHH--------HHHHHHHHHh-
Q 015029 5 LEKKAKEAFIDDYFELAYDLYSQAIEISP----NS------AELFADRAQASIKLQNFTEA--------VADANRAIEL- 65 (414)
Q Consensus 5 ~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P----~~------~~~~~~ra~~~~kl~~~~~A--------l~~~~~Ai~l- 65 (414)
..+.|..++..|++.+|+..|..+|..-| ++ ..-++.++.-|+--=+.+.+ ..+..+.++|
T Consensus 105 ~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icreYilal~iEl~Rr~l~~~~~~~~kR~lELA 184 (320)
T 3mkr_B 105 RLQLCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMETERKKLPKETLEQQKRICEMA 184 (320)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHGGGCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHhhheeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCchhHHHHHHHH
Confidence 46889999999999999999999998754 22 11122223222211011111 1222333333
Q ss_pred --------CCCCHHHHHHHHH-HHHHcCChHHHHHHHHHHHHhCCCCH
Q 015029 66 --------EPSMSKAYWRKAT-ACMKLEEYETAKVALEKGASLAPGDS 104 (414)
Q Consensus 66 --------~p~~~~a~~~~g~-~~~~lg~y~~A~~~~~~a~~l~p~~~ 104 (414)
.|.+...-+|.|+ ..++.++|..|..+.++.+++.|...
T Consensus 185 AYFT~c~Lqp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~~~ 232 (320)
T 3mkr_B 185 AYFTHSNLQPVHMILVLRTALNLFFKLKNFRTAAAFARRLLELGPKPE 232 (320)
T ss_dssp HHHTTSCCCHHHHHHHHHHHHHHHHHTTBHHHHHHHHHHHHHTCCCHH
T ss_pred HHhccCCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCHH
Confidence 2323333344444 47889999999999999999998644
No 288
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=73.68 E-value=18 Score=30.59 Aligned_cols=57 Identities=9% Similarity=-0.045 Sum_probs=32.7
Q ss_pred HHHHHHHccCHHHHHHHHHHHHHhCCCC------HHHHHH-HHHHHH--HcCChHHHHHHHHHHHH
Q 015029 42 RAQASIKLQNFTEAVADANRAIELEPSM------SKAYWR-KATACM--KLEEYETAKVALEKGAS 98 (414)
Q Consensus 42 ra~~~~kl~~~~~Al~~~~~Ai~l~p~~------~~a~~~-~g~~~~--~lg~y~~A~~~~~~a~~ 98 (414)
.+..++..|+|-+|-..++.+....+.. ...+.+ +|.+++ +.|+..-|...|.+++.
T Consensus 38 ~~i~lFn~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~ 103 (161)
T 2ijq_A 38 HGVRLYNSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQ 103 (161)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 3445555566666666666666554332 334444 444433 35777777777777765
No 289
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=73.51 E-value=6.1 Score=41.29 Aligned_cols=52 Identities=27% Similarity=0.173 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChH
Q 015029 36 AELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYE 87 (414)
Q Consensus 36 ~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~lg~y~ 87 (414)
......+|..++..|+|.-|...++.++..+|++..|...++.+|.++|.-.
T Consensus 449 ~~~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~~~~ 500 (658)
T 2cfu_A 449 AERLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGYQA 500 (658)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 5567778888888888888888888888888888888888888888888653
No 290
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=73.50 E-value=4.9 Score=29.97 Aligned_cols=28 Identities=25% Similarity=0.371 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 015029 3 TDLEKKAKEAFIDDYFELAYDLYSQAIE 30 (414)
Q Consensus 3 e~~~~~g~~~~~~g~y~~Ai~~y~~AL~ 30 (414)
..+..+|...-..|+|++|+.+|..|++
T Consensus 14 ~~l~~~Av~~D~~g~y~eAl~~Y~~aie 41 (85)
T 2v6x_A 14 IELVQKAIDLDTATQYEEAYTAYYNGLD 41 (85)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3455555555566666666666655554
No 291
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=72.83 E-value=5.1 Score=30.57 Aligned_cols=27 Identities=22% Similarity=0.297 Sum_probs=14.2
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 015029 4 DLEKKAKEAFIDDYFELAYDLYSQAIE 30 (414)
Q Consensus 4 ~~~~~g~~~~~~g~y~~Ai~~y~~AL~ 30 (414)
.+..+|..+-..|+|++|+.+|..||+
T Consensus 17 ~lv~~Ave~D~~g~y~eAl~~Y~~Aie 43 (93)
T 1wfd_A 17 AVLKRAVELDAESRYQQALVCYQEGID 43 (93)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 344555555555555555555555444
No 292
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=72.22 E-value=4.7 Score=32.22 Aligned_cols=33 Identities=30% Similarity=0.305 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q 015029 18 FELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIEL 65 (414)
Q Consensus 18 y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l 65 (414)
...|+.+..+|++. -..++|++|+.+|..|+++
T Consensus 15 l~kAi~lv~~Ave~---------------D~ag~y~eAl~lY~~Aie~ 47 (117)
T 2cpt_A 15 LQKAIDLASKAAQE---------------DKAGNYEEALQLYQHAVQY 47 (117)
T ss_dssp HHHHHHHHHHHHHH---------------HHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH---------------HHccCHHHHHHHHHHHHHH
Confidence 34566666666533 2345666666666666553
No 293
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=71.46 E-value=16 Score=39.85 Aligned_cols=96 Identities=11% Similarity=0.022 Sum_probs=69.3
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHh-C--------------------
Q 015029 8 KAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIEL-E-------------------- 66 (414)
Q Consensus 8 ~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l-~-------------------- 66 (414)
....+...+.|+-|.+ .+...|.++..-+-+|.+|+.+|++++|..+|.+|-.- .
T Consensus 816 l~~~L~~~~~~~~a~e----L~~~~~~t~~~~yv~gr~~L~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~~e 891 (950)
T 4gq2_M 816 LVEKLFLFKQYNACMQ----LIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYH 891 (950)
T ss_dssp HHHHHHHTTCHHHHHH----HGGGCCSSHHHHHHHHHHHHHTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHHTT
T ss_pred HHHHHHHhcHHHHHHH----HHhhcCCChHHHHHHHHHHHHcCCHHHHHHHHHHHhhhcccCcccccchhhhhhccCccc
Confidence 3456677777775543 34567888877788999999999999999999876521 1
Q ss_pred CC--CHHHHHHHHHHHHHcCChHHHHHHHHHHHHh-CCCCHHHH
Q 015029 67 PS--MSKAYWRKATACMKLEEYETAKVALEKGASL-APGDSRFT 107 (414)
Q Consensus 67 p~--~~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l-~p~~~~~~ 107 (414)
+. ....|+....++...+-|+-++.+.+.|+.. .++++...
T Consensus 892 ~~~~~~~YY~hV~~LFE~~~a~~~vi~fA~lAI~~~~~dd~~l~ 935 (950)
T 4gq2_M 892 HQNLLSCYYLHLSKKLFEESAYIDALEFSLLADASKETDDEDLS 935 (950)
T ss_dssp TCSHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCSCCHHHH
T ss_pred ccchhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcccCCccch
Confidence 01 1235666777777888899999999999974 45566543
No 294
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=70.48 E-value=11 Score=36.96 Aligned_cols=80 Identities=15% Similarity=0.103 Sum_probs=63.5
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC---CCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhC--CCCHHHHHHH
Q 015029 36 AELFADRAQASIKLQNFTEAVADANRAIELEP---SMSKAYWRKATACMKLEEYETAKVALEKGASLA--PGDSRFTNLI 110 (414)
Q Consensus 36 ~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p---~~~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l~--p~~~~~~~~l 110 (414)
..++..+|..|++.|++++|+..|.++..... .....++....++...+++..+...+.++..+. ..+......+
T Consensus 131 ~~~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~~~~~~l 210 (429)
T 4b4t_R 131 AQAWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWERRNRY 210 (429)
T ss_dssp SSCCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCTHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCHHHHHHH
Confidence 35788999999999999999999999887643 357789999999999999999999999987653 3455555555
Q ss_pred HHHHH
Q 015029 111 KEFVG 115 (414)
Q Consensus 111 ~~~~~ 115 (414)
..+..
T Consensus 211 k~~~g 215 (429)
T 4b4t_R 211 KTYYG 215 (429)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44443
No 295
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=68.68 E-value=19 Score=39.99 Aligned_cols=94 Identities=12% Similarity=0.024 Sum_probs=68.9
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHh---C-------------------
Q 015029 9 AKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIEL---E------------------- 66 (414)
Q Consensus 9 g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l---~------------------- 66 (414)
...+...+.|+.|.+ .+...|.++...+-+|.+|+..|++++|..+|.+|-.- +
T Consensus 819 ~~~l~~~~~~~~~~~----l~~~~~~~~~~~yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~ 894 (1139)
T 4fhn_B 819 VEKLFLFKQYNACMQ----LIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHH 894 (1139)
T ss_dssp HHHHHHHSCTTHHHH----HHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTS
T ss_pred HHHHHHhhhHHHHHH----HhhhccCCcHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccc
Confidence 345666777766554 34567888888888999999999999999999887311 0
Q ss_pred -CCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCC-CCHHH
Q 015029 67 -PSMSKAYWRKATACMKLEEYETAKVALEKGASLAP-GDSRF 106 (414)
Q Consensus 67 -p~~~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p-~~~~~ 106 (414)
...+..|+....++...+.|+.++++.+.|++..+ ++..+
T Consensus 895 ~~~l~~YY~hv~~LFe~~~~~~~vi~fa~lAi~~~~~~~~~~ 936 (1139)
T 4fhn_B 895 QNLLSCYYLHLSKKLFEESAYIDALEFSLLADASKETDDEDL 936 (1139)
T ss_dssp CCSSHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHCCSCCHHH
T ss_pred cccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccCCChhh
Confidence 11345566677778888999999999999988764 45543
No 296
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=67.45 E-value=13 Score=36.84 Aligned_cols=86 Identities=5% Similarity=-0.109 Sum_probs=62.5
Q ss_pred HHHHHHHHHHHHHhCCCC----------------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC----------CCHH
Q 015029 18 FELAYDLYSQAIEISPNS----------------AELFADRAQASIKLQNFTEAVADANRAIELEP----------SMSK 71 (414)
Q Consensus 18 y~~Ai~~y~~AL~~~P~~----------------~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p----------~~~~ 71 (414)
.++|.....++....-++ .-...++-.+|+++++...+...+...-.... +...
T Consensus 142 le~~a~~i~k~F~~cl~Dr~~~~~~s~p~kk~~~l~l~n~L~kiYFkl~~~~lckni~k~i~~~~~~p~~~~~p~~q~v~ 221 (455)
T 3t5v_B 142 LSHISSILSRLFNSIKPPRGNASSTNIPGKQRILLYLVNKLNNIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQLDQQIE 221 (455)
T ss_dssp HHHHHHHHHHHHHHCCCC----CCSSCCHHHHHHHHHHHHHHHHHHHSSCCTTHHHHHHTHHHHCCCSCGGGSCHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccCCCcccccccccchhHHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCcChhhCCccceEe
Confidence 566777777777763221 11234466788999999888877755443332 1356
Q ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHh-CCCC
Q 015029 72 AYWRKATACMKLEEYETAKVALEKGASL-APGD 103 (414)
Q Consensus 72 a~~~~g~~~~~lg~y~~A~~~~~~a~~l-~p~~ 103 (414)
.+|++|..++..++|.+|.++|..|++. .|.+
T Consensus 222 Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~~ 254 (455)
T 3t5v_B 222 YRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNLP 254 (455)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred eeHHHHHHHHHHccHHHHHHHHHHHHHhcCCcc
Confidence 8999999999999999999999999998 7754
No 297
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=64.56 E-value=48 Score=34.20 Aligned_cols=123 Identities=11% Similarity=-0.114 Sum_probs=74.3
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH-H-HHH--HHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 015029 6 EKKAKEAFIDDYFELAYDLYSQAIEISPNSAE-L-FAD--RAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (414)
Q Consensus 6 ~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~-~-~~~--ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~ 81 (414)
...+...+...+.+.|...|........-+.. . ... +|..++..+...++...+..+.....+.....++.+.++
T Consensus 218 ~~~~~~rlar~d~~~A~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~r~Al- 296 (618)
T 1qsa_A 218 AAVAFASVARQDAENARLMIPSLAQAQQLNEDQIQELRDIVAWRLMGNDVTDEQAKWRDDAIMRSQSTSLIERRVRMAL- 296 (618)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTSCSTTCCHHHHHHHHHHHHTCCCHHHHHHHHHHHH-
T ss_pred HHHHHHHHHhcCHHHHHHHHHhhhhccCCCHHHHHHHHHHHHHHHHHcCCChHHHHHHHhccccCCChHHHHHHHHHHH-
Confidence 34455566677888999998776554333322 1 122 222222234356777777776655544444555555554
Q ss_pred HcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhhhhhhhhhHHH
Q 015029 82 KLEEYETAKVALEKGASLAPGDSRFTNLIKEFVGLLMQNAVYLCWNYE 129 (414)
Q Consensus 82 ~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 129 (414)
+.|++..|..+|...-.-.........|++++...++.......+...
T Consensus 297 r~~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~~g~~~~a~~~~~~ 344 (618)
T 1qsa_A 297 GTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERGREAEAKEILHQ 344 (618)
T ss_dssp HHTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHccccccccHhHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 669999999999765443334677889999988766665555544444
No 298
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=62.02 E-value=11 Score=28.86 Aligned_cols=32 Identities=16% Similarity=0.229 Sum_probs=23.4
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Q 015029 6 EKKAKEAFIDDYFELAYDLYSQAIEISPNSAE 37 (414)
Q Consensus 6 ~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~ 37 (414)
...|..++.+|+++.|+.||..||...|+-..
T Consensus 24 V~lGE~L~~~g~~e~av~Hf~nAl~Vc~qP~~ 55 (95)
T 1om2_A 24 IQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQ 55 (95)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHSCHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcCCHHH
Confidence 55677777888888888877777777766443
No 299
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=59.17 E-value=1.2e+02 Score=30.63 Aligned_cols=61 Identities=15% Similarity=0.081 Sum_probs=39.7
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCC--C---CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC
Q 015029 8 KAKEAFIDDYFELAYDLYSQAIEISP--N---SAELFADRAQASIKLQNFTEAVADANRAIELEPS 68 (414)
Q Consensus 8 ~g~~~~~~g~y~~Ai~~y~~AL~~~P--~---~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~ 68 (414)
.-..|+..+.|+.|..+..++.-... . -..+++..|.++.-.++|.+|..++..|++..|.
T Consensus 237 lLRnYL~~~~y~qA~~lvsk~~fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~ 302 (523)
T 4b4t_S 237 ILRDFLNNGEVDSASDFISKLEYPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPH 302 (523)
T ss_dssp HHHHHHHSSCSTTHHHHHHHHCSCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSC
T ss_pred HHHHHHccCcHHHHHHHHhcCcCCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCc
Confidence 34556667777777777777633211 1 2777777777777777777777777777776553
No 300
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=59.04 E-value=27 Score=38.07 Aligned_cols=79 Identities=6% Similarity=-0.092 Sum_probs=59.2
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHH-hCC--------------------C--CHHHHHHHHHHHHHccCHHHHHHHHHHH
Q 015029 6 EKKAKEAFIDDYFELAYDLYSQAIE-ISP--------------------N--SAELFADRAQASIKLQNFTEAVADANRA 62 (414)
Q Consensus 6 ~~~g~~~~~~g~y~~Ai~~y~~AL~-~~P--------------------~--~~~~~~~ra~~~~kl~~~~~Al~~~~~A 62 (414)
+-+|.+++..|++++|..+|.+|-. +.. . ...+|...+..+.+.+-|+-++..+..|
T Consensus 844 yv~gr~~L~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~~e~~~~~~~YY~hV~~LFE~~~a~~~vi~fA~lA 923 (950)
T 4gq2_M 844 YLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLA 923 (950)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHHTTTCSHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHhhhcccCcccccchhhhhhccCcccccchhHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 5689999999999999999987532 111 1 1347888889999999999999999999
Q ss_pred HHhC-CCCH----HHHHHHHHHHHHcC
Q 015029 63 IELE-PSMS----KAYWRKATACMKLE 84 (414)
Q Consensus 63 i~l~-p~~~----~a~~~~g~~~~~lg 84 (414)
|..- +++. ..|.++..+...+|
T Consensus 924 I~~~~~dd~~l~~~l~~r~f~~a~a~g 950 (950)
T 4gq2_M 924 DASKETDDEDLSIAITHETLKTACAAG 950 (950)
T ss_dssp HHTCCSCCHHHHHHHHHHHHHHHHHHC
T ss_pred HhhcccCCccchHHHHHHHHHHHhhCC
Confidence 9764 3443 36666666665544
No 301
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=58.98 E-value=20 Score=27.00 Aligned_cols=47 Identities=15% Similarity=0.177 Sum_probs=29.0
Q ss_pred CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC--CHHHH-HHHHHHHH
Q 015029 35 SAELFADRAQASIKLQNFTEAVADANRAIELEPS--MSKAY-WRKATACM 81 (414)
Q Consensus 35 ~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~--~~~a~-~~~g~~~~ 81 (414)
.+..++.-|.-+++.++|.+|+..|+++..+-.+ .-+.+ |.++.|-.
T Consensus 52 ~~r~~i~eak~~y~~~ny~ea~~l~~k~~n~ten~~i~ki~~fyl~ec~k 101 (106)
T 2vkj_A 52 KARSLIAEGKDLFETANYGEALVFFEKALNLSDNEEIKKIASFYLEECRK 101 (106)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcchhHHHHHHHHHHccccCHHHHHHHHHHHHHHHH
Confidence 3455666666777777777777777777765432 23333 66666644
No 302
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=56.84 E-value=10 Score=27.89 Aligned_cols=28 Identities=18% Similarity=0.196 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 015029 4 DLEKKAKEAFIDDYFELAYDLYSQAIEI 31 (414)
Q Consensus 4 ~~~~~g~~~~~~g~y~~Ai~~y~~AL~~ 31 (414)
+....|+.+...|+|+.|+.+|+.+++.
T Consensus 14 e~~k~ARe~Al~GnYdta~~yY~g~~~q 41 (78)
T 2rpa_A 14 ENVKLAREYALLGNYDSAMVYYQGVLDQ 41 (78)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcChHHHHHHHHHHHHH
Confidence 3456777788888888888888877764
No 303
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=55.51 E-value=44 Score=25.16 Aligned_cols=48 Identities=17% Similarity=0.213 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHH----HHHHHHHHHHHHh
Q 015029 70 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSR----FTNLIKEFVGLLM 118 (414)
Q Consensus 70 ~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p~~~~----~~~~l~~~~~~~~ 118 (414)
.+....-|.-+++.++|.+|...|+++..+-. |+. +...+..|.+.+.
T Consensus 53 ~r~~i~eak~~y~~~ny~ea~~l~~k~~n~te-n~~i~ki~~fyl~ec~kkla 104 (106)
T 2vkj_A 53 ARSLIAEGKDLFETANYGEALVFFEKALNLSD-NEEIKKIASFYLEECRKKLA 104 (106)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcchhHHHHHHHHHHcccc-CHHHHHHHHHHHHHHHHHhc
Confidence 44555667778999999999999999886654 333 3466778876553
No 304
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=55.42 E-value=48 Score=27.89 Aligned_cols=26 Identities=8% Similarity=-0.033 Sum_probs=13.0
Q ss_pred HHHHHHHHHcCChHHHHHHHHHHHHh
Q 015029 74 WRKATACMKLEEYETAKVALEKGASL 99 (414)
Q Consensus 74 ~~~g~~~~~lg~y~~A~~~~~~a~~l 99 (414)
|..|+.+|+.|+|=+|-+.|+.+-.-
T Consensus 36 ~~~~i~lFn~g~yfeaHEvLEe~W~~ 61 (161)
T 2ijq_A 36 VVHGVRLYNSGEFHESHDCFEDEWYN 61 (161)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHTTT
T ss_pred HHHHHHHHhCCCchHHHHHHHHHHHh
Confidence 44445555555555555555544443
No 305
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=55.33 E-value=37 Score=24.55 Aligned_cols=38 Identities=8% Similarity=0.173 Sum_probs=28.5
Q ss_pred HHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHHHH
Q 015029 74 WRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIK 111 (414)
Q Consensus 74 ~~~g~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~ 111 (414)
..+|..+...|++++|..+|-+|+...|.-..+...+.
T Consensus 21 V~~GE~L~~~g~~~~~~~hf~nAl~Vc~qP~~LL~i~q 58 (73)
T 3ax2_A 21 IQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLLQVLQ 58 (73)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 45788888888888888888888888887666655544
No 306
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=55.17 E-value=25 Score=36.35 Aligned_cols=83 Identities=13% Similarity=0.012 Sum_probs=60.6
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHH
Q 015029 15 DDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALE 94 (414)
Q Consensus 15 ~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~lg~y~~A~~~~~ 94 (414)
.+...++...+.+++....+ .....-++...++.+++..|...|...-.-......+.|=+|.++..+|+-.+|...|+
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~-~~~~e~~~r~Alr~~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~~g~~~~a~~~~~ 343 (618)
T 1qsa_A 265 NDVTDEQAKWRDDAIMRSQS-TSLIERRVRMALGTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERGREAEAKEILH 343 (618)
T ss_dssp TTCCHHHHHHHHHHHHTCCC-HHHHHHHHHHHHHHTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cCCChHHHHHHHhccccCCC-hHHHHHHHHHHHHCCCHHHHHHHHHHccccccccHhHHHHHHHHHHHcCCHHHHHHHHH
Confidence 44355777777776654443 33344444455678999999998876554334578899999999999999999999999
Q ss_pred HHHH
Q 015029 95 KGAS 98 (414)
Q Consensus 95 ~a~~ 98 (414)
.+..
T Consensus 344 ~~a~ 347 (618)
T 1qsa_A 344 QLMQ 347 (618)
T ss_dssp HHHT
T ss_pred HHhc
Confidence 8864
No 307
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=53.87 E-value=38 Score=25.69 Aligned_cols=26 Identities=0% Similarity=-0.102 Sum_probs=14.1
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhC
Q 015029 7 KKAKEAFIDDYFELAYDLYSQAIEIS 32 (414)
Q Consensus 7 ~~g~~~~~~g~y~~Ai~~y~~AL~~~ 32 (414)
..|..+|..|+|=+|=+.+..+-...
T Consensus 6 ~~~~~lfn~g~~~eaHEvlE~~W~~~ 31 (94)
T 2cwy_A 6 EEVLGLWRAGRYYEVHEVLEPYWLKA 31 (94)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHhCCChHHHHHHHHHHHhhC
Confidence 34555555555555555555555544
No 308
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=52.48 E-value=93 Score=30.41 Aligned_cols=63 Identities=10% Similarity=0.123 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHH---hCCCC----HHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q 015029 3 TDLEKKAKEAFIDDYFELAYDLYSQAIE---ISPNS----AELFADRAQASIKLQNFTEAVADANRAIEL 65 (414)
Q Consensus 3 e~~~~~g~~~~~~g~y~~Ai~~y~~AL~---~~P~~----~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l 65 (414)
+-+..+...++..+||..|...++++.. ..+.. ..++...|..|...++|.+|..+|..++..
T Consensus 178 e~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~~~lk~~~~~~~~~~~~~e~~y~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 178 QFILEQMELSILKGDYSQATVLSRKILKKTFKNPKYESLKLEYYNLLVKISLHKREYLEVAQYLQEIYQT 247 (445)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 4566788899999999999999998743 23333 356677888888999999999999888764
No 309
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=51.99 E-value=23 Score=26.93 Aligned_cols=27 Identities=22% Similarity=0.231 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHH
Q 015029 71 KAYWRKATACMKLEEYETAKVALEKGA 97 (414)
Q Consensus 71 ~a~~~~g~~~~~lg~y~~A~~~~~~a~ 97 (414)
-.+-|++..+...|+|++|+.|.+++.
T Consensus 16 H~~~RrAe~ll~~gkydeAIech~kAa 42 (97)
T 2crb_A 16 HQQSRRADRLLAAGKYEEAISCHRKAT 42 (97)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hHhhhHHHHHHhcCCHHHHHHHHHHHH
Confidence 345567777777777777766665543
No 310
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=50.91 E-value=25 Score=26.70 Aligned_cols=25 Identities=20% Similarity=0.275 Sum_probs=16.3
Q ss_pred HHHHHHHHHHccCHHHHHHHHHHHH
Q 015029 39 FADRAQASIKLQNFTEAVADANRAI 63 (414)
Q Consensus 39 ~~~ra~~~~kl~~~~~Al~~~~~Ai 63 (414)
+..||..+++.|+|++||.|..+|.
T Consensus 18 ~~RrAe~ll~~gkydeAIech~kAa 42 (97)
T 2crb_A 18 QSRRADRLLAAGKYEEAISCHRKAT 42 (97)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hhhHHHHHHhcCCHHHHHHHHHHHH
Confidence 4456666666677777666666665
No 311
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=49.77 E-value=35 Score=29.70 Aligned_cols=34 Identities=26% Similarity=0.187 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q 015029 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSA 36 (414)
Q Consensus 3 e~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~ 36 (414)
+-++-.|..++.+++|.+|-+++..|+...|.+.
T Consensus 15 ~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~ 48 (203)
T 3t5x_A 15 TYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSS 48 (203)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTTC
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHhH
Confidence 4467788899999999999999999999888764
No 312
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=46.37 E-value=1.2e+02 Score=25.21 Aligned_cols=117 Identities=12% Similarity=-0.024 Sum_probs=54.1
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCC------------------HHHHHHHHHHH--HHccCHHHHHHHHHHHHHhCC
Q 015029 8 KAKEAFIDDYFELAYDLYSQAIEISPNS------------------AELFADRAQAS--IKLQNFTEAVADANRAIELEP 67 (414)
Q Consensus 8 ~g~~~~~~g~y~~Ai~~y~~AL~~~P~~------------------~~~~~~ra~~~--~kl~~~~~Al~~~~~Ai~l~p 67 (414)
.|..+...|..++.++...+.+..++-. ...+-..|..+ ..-+++...+.||-+ ++-
T Consensus 13 eAK~~ildG~v~qGveii~k~~~ssni~E~NW~ICNiiD~a~C~y~v~vLd~IGkiFDis~C~NlKrVi~C~~~---~n~ 89 (172)
T 1wy6_A 13 DAKKFLLDGYIDEGVKIVLEITKSSTKSEYNWFICNLLESIDCRYMFQVLDKIGSYFDLDKCQNLKSVVECGVI---NNT 89 (172)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHSCHHHHTHHHHHHHHHCCHHHHHHHHHHHGGGSCGGGCSCTHHHHHHHHH---TTC
T ss_pred HHHHHHHhhhHHHHHHHHHHHcCCCCccccceeeeecchhhchhHHHHHHHHHhhhcCcHhhhcHHHHHHHHHH---hcc
Confidence 4555666677777776666665554322 11122222211 112455555555522 222
Q ss_pred CCHHHHHHHHHH-HHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhhhhhhhhhHHH
Q 015029 68 SMSKAYWRKATA-CMKLEEYETAKVALEKGASLAPGDSRFTNLIKEFVGLLMQNAVYLCWNYE 129 (414)
Q Consensus 68 ~~~~a~~~~g~~-~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 129 (414)
.+ -|+.+|.- +...|+-+.-...+...+.-++-++.+...++.+++.++..........+
T Consensus 90 ~s--e~vd~ALd~lv~~~KkDqLdki~~~~l~n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~ 150 (172)
T 1wy6_A 90 LN--EHVNKALDILVIQGKRDKLEEIGREILKNNEVSASILVAIANALRRVGDERDATTLLIE 150 (172)
T ss_dssp CC--HHHHHHHHHHHHTTCHHHHHHHHHHHC--CCSCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred hH--HHHHHHHHHHHHhccHhHHHHHHHHHhccCCCChHHHHHHHHHHHHhcchhhHHHHHHH
Confidence 22 23444443 33444444444444433343444566666666666666555554444333
No 313
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=46.14 E-value=51 Score=34.23 Aligned_cols=59 Identities=15% Similarity=0.135 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhhhhhhhhhHH
Q 015029 70 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKEFVGLLMQNAVYLCWNY 128 (414)
Q Consensus 70 ~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~~~~~~~~ 128 (414)
..+.+.+|...+..|+|.-|.+.+..++..+|+|..++..++++.++++....-..|+.
T Consensus 449 ~~~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~~~~~~~~~r~ 507 (658)
T 2cfu_A 449 AERLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGYQAENAGWRN 507 (658)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHCSSHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhccChHHHH
Confidence 35677889999999999999999999999999999999999999977765544444433
No 314
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=45.11 E-value=59 Score=31.19 Aligned_cols=44 Identities=14% Similarity=0.011 Sum_probs=34.9
Q ss_pred HHHHHHHHHHhC-----CCCHHHHHHHHHHHHHcCChHHHHHHHHHHHH
Q 015029 55 AVADANRAIELE-----PSMSKAYWRKATACMKLEEYETAKVALEKGAS 98 (414)
Q Consensus 55 Al~~~~~Ai~l~-----p~~~~a~~~~g~~~~~lg~y~~A~~~~~~a~~ 98 (414)
++..|.+||... ..+.-.|..+|-.+++.++|.+|+.++..+-.
T Consensus 276 ~l~L~~~AI~sa~~yY~n~HvYPYtylgGy~yR~~~~reAl~~WA~Aa~ 324 (472)
T 3re2_A 276 AEELFKEAITVAKREYSDHHIYPYTYLGGYYYRKKKYYEAIASWVDAGY 324 (472)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCccchhhhhhhhhhcchHHHHHHHHHHHHH
Confidence 677777777653 34677888899999999999999998887654
No 315
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=50.73 E-value=4.6 Score=42.35 Aligned_cols=53 Identities=19% Similarity=0.141 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHH
Q 015029 37 ELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETA 89 (414)
Q Consensus 37 ~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~lg~y~~A 89 (414)
...+.+|..++..|+|.-|...++.++..+|++..|...++.+|.++|.-.+.
T Consensus 462 ~~~~~~a~~~~~~g~~~wa~~l~~~~~~a~p~~~~ar~l~a~~~~~l~~~~~~ 514 (668)
T 2yhe_A 462 DAVLKQMRAAIDKGDYRWAVQLGNHLVFADPANKDARALQADAMEQLGYQTEN 514 (668)
Confidence 45666777778888888888888888888888888888888888888876543
No 316
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=44.54 E-value=47 Score=28.85 Aligned_cols=51 Identities=14% Similarity=-0.060 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHH-----HHHHHHHHHcCCh
Q 015029 36 AELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAY-----WRKATACMKLEEY 86 (414)
Q Consensus 36 ~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~-----~~~g~~~~~lg~y 86 (414)
..+++.+|..++..++|.+|..++..|++..|...... -.+-.+-..+|++
T Consensus 14 v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~~~~k~~IL~yLIp~~Ll~G~i 69 (203)
T 3t5x_A 14 VTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQKNKRMILIYLLPVKMLLGHM 69 (203)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHcCCC
Confidence 46888999999999999999999999999988653322 2233334456664
No 317
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=42.75 E-value=1.5e+02 Score=28.97 Aligned_cols=77 Identities=12% Similarity=0.001 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHHHcc--CHHHHHHHHHHHHHhC-----CCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHh------CCC
Q 015029 36 AELFADRAQASIKLQ--NFTEAVADANRAIELE-----PSMSKAYWRKATACMKLEEYETAKVALEKGASL------APG 102 (414)
Q Consensus 36 ~~~~~~ra~~~~kl~--~~~~Al~~~~~Ai~l~-----p~~~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l------~p~ 102 (414)
+.++.++|.+-.-.. ....++..|++||... ..+.-.|.++|-.+++.++|.+|+.++..+-.. ..+
T Consensus 262 PmALgnLgDLEei~pt~grp~~~~Lf~~AI~~ar~~Y~~~hvYPYtYlgG~~~R~~~~~eAl~~wa~aa~Vi~~YnY~re 341 (489)
T 4gq4_A 262 PMALGNLADLEELEPTPGRPDPLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNRNVREALQAWADTATVIQDYNYCRE 341 (489)
T ss_dssp HHHHHHHHHHHHHSCCTTSCCHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCCCTT
T ss_pred chhhhcccCHhhcCCCCCCCCHHHHHHHHHHHHHHhcccCcccceeecchHHHHhhhHHHHHHHhhhhhhhhhhcccccc
Confidence 445555554433221 1123566777777653 346778889999999999999999999886542 345
Q ss_pred CHHHHHHHHH
Q 015029 103 DSRFTNLIKE 112 (414)
Q Consensus 103 ~~~~~~~l~~ 112 (414)
|.++...+..
T Consensus 342 DeEiYke~~e 351 (489)
T 4gq4_A 342 DEEIYKEFFE 351 (489)
T ss_dssp CHHHHHHHHH
T ss_pred hHHHHHHHHH
Confidence 6666555443
No 318
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=42.57 E-value=38 Score=24.99 Aligned_cols=12 Identities=25% Similarity=0.050 Sum_probs=5.0
Q ss_pred HHHHHHHHHHHH
Q 015029 53 TEAVADANRAIE 64 (414)
Q Consensus 53 ~~Al~~~~~Ai~ 64 (414)
+.|+..+.+|++
T Consensus 17 ~~Ai~lv~~Ave 28 (83)
T 2w2u_A 17 EMARKYAINAVK 28 (83)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 334444444433
No 319
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=41.51 E-value=1.9e+02 Score=25.67 Aligned_cols=54 Identities=9% Similarity=-0.036 Sum_probs=37.4
Q ss_pred HHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHh
Q 015029 12 AFIDDYFELAYDLYSQAIEI--------SPNSAELFADRAQASIK-LQNFTEAVADANRAIEL 65 (414)
Q Consensus 12 ~~~~g~y~~Ai~~y~~AL~~--------~P~~~~~~~~ra~~~~k-l~~~~~Al~~~~~Ai~l 65 (414)
-|..|+-+.|...|..|+.+ +|-...+..|.+..|+. +++.++|...+..|+..
T Consensus 135 E~~~g~~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd~ 197 (227)
T 2o8p_A 135 EFGLCSLEDSKKIHQDAFTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGKI 197 (227)
T ss_dssp HTTSSCHHHHHHHHHHHHHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHH
T ss_pred HHccccHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 34566677888888888764 23334666677777665 57888888888888653
No 320
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=41.24 E-value=41 Score=24.75 Aligned_cols=16 Identities=25% Similarity=0.127 Sum_probs=7.3
Q ss_pred HHHHHHHHHHhCCCCH
Q 015029 89 AKVALEKGASLAPGDS 104 (414)
Q Consensus 89 A~~~~~~a~~l~p~~~ 104 (414)
|++.|..++...|+..
T Consensus 37 aie~l~~~lk~e~d~~ 52 (83)
T 2v6y_A 37 AIEVLSQIIVLYPESV 52 (83)
T ss_dssp HHHHHHHHHHHCTTCT
T ss_pred HHHHHHHHHHHCCCHH
Confidence 3344444444555443
No 321
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=41.00 E-value=2.2e+02 Score=26.39 Aligned_cols=26 Identities=4% Similarity=-0.253 Sum_probs=22.6
Q ss_pred CHHHHHHHHHHHHHcCChHHHHHHHH
Q 015029 69 MSKAYWRKATACMKLEEYETAKVALE 94 (414)
Q Consensus 69 ~~~a~~~~g~~~~~lg~y~~A~~~~~ 94 (414)
++..|..+|..|...|+|.+|..+|-
T Consensus 133 dp~LH~~~a~~~~~e~~~~~A~~H~i 158 (312)
T 2wpv_A 133 DPYLHNTIGSKLLEGDFVYEAERYFM 158 (312)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHhhcCCHHHHHHHHH
Confidence 67888999999999999999888875
No 322
>2p58_C Putative type III secretion protein YSCG; type III secretion system, structure, needle protein, YSCE, YSCF, transport protein/chaperone complex; 1.80A {Yersinia pestis}
Probab=40.61 E-value=1.1e+02 Score=23.67 Aligned_cols=80 Identities=13% Similarity=0.023 Sum_probs=43.2
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChH
Q 015029 8 KAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYE 87 (414)
Q Consensus 8 ~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~lg~y~ 87 (414)
.|....-.-.+++|...-+ .|...+..-.+-.-|...++..|+|++|+...+... .+..---+|.|-.++|-..
T Consensus 13 ~AL~gTG~H~HqEA~tIAd-wL~~~~~~E~v~lIR~sSLmNrG~Yq~Al~l~~~~c-----~pdlepw~ALce~rlGl~s 86 (116)
T 2p58_C 13 IALIGTGNHYHEEANCIAE-WLHLKGEEEAVQLIRLSSLMNRGDYASALQQGNKLA-----YPDLEPWLALCEYRLGLGS 86 (116)
T ss_dssp HHHHHHTTTCHHHHHHHHH-HHHHTTCHHHHHHHHHHHHHHTTCHHHHHHHHTTSC-----CGGGHHHHHHHHHHHTCHH
T ss_pred HHHHHccchHHHHHHHHHH-HHHhCCcHHHHHHHHHHHHHcchhHHHHHHhcCCCC-----CchHHHHHHHHHHhcccHH
Confidence 3444444455666655443 344555543444556667777777777765553332 2333333455566666666
Q ss_pred HHHHHH
Q 015029 88 TAKVAL 93 (414)
Q Consensus 88 ~A~~~~ 93 (414)
.+...+
T Consensus 87 ~le~rL 92 (116)
T 2p58_C 87 ALESRL 92 (116)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 655544
No 323
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=39.67 E-value=1.7e+02 Score=25.40 Aligned_cols=78 Identities=21% Similarity=0.120 Sum_probs=54.5
Q ss_pred HHHHHHHHhCC------CCHHHHHHHHHHHHHc---cCHHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHcCChHHHHH
Q 015029 23 DLYSQAIEISP------NSAELFADRAQASIKL---QNFTEAVADANRAIELE--PSMSKAYWRKATACMKLEEYETAKV 91 (414)
Q Consensus 23 ~~y~~AL~~~P------~~~~~~~~ra~~~~kl---~~~~~Al~~~~~Ai~l~--p~~~~a~~~~g~~~~~lg~y~~A~~ 91 (414)
.++.+++...- +|+. |+.+-.-|... ++..++...|......+ -..+..|-..|..+...|+|.+|.+
T Consensus 58 ~lLErc~~~F~~~~rYkND~R-YLklWl~Ya~~~~~~~~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~ 136 (202)
T 3esl_A 58 STMERCLIYIQDMETYRNDPR-FLKIWIWYINLFLSNNFHESENTFKYMFNKGIGTKLSLFYEEFSKLLENAQFFLEAKV 136 (202)
T ss_dssp HHHHHHHHHHTTCGGGTTCHH-HHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTSSTTBHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHhcccccccCCHH-HHHHHHHHHHhhcccccCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 46666666422 2222 33333333333 33778888888888765 4578888889999999999999999
Q ss_pred HHHHHHHhCC
Q 015029 92 ALEKGASLAP 101 (414)
Q Consensus 92 ~~~~a~~l~p 101 (414)
.|+.+++..-
T Consensus 137 Vy~~GI~~~A 146 (202)
T 3esl_A 137 LLELGAENNC 146 (202)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHcCC
Confidence 9999998764
No 324
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=37.68 E-value=32 Score=25.22 Aligned_cols=27 Identities=19% Similarity=0.131 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHH
Q 015029 72 AYWRKATACMKLEEYETAKVALEKGAS 98 (414)
Q Consensus 72 a~~~~g~~~~~lg~y~~A~~~~~~a~~ 98 (414)
-...+|+=|..+|+|+.|+.+|+.++.
T Consensus 14 e~~k~ARe~Al~GnYdta~~yY~g~~~ 40 (78)
T 2rpa_A 14 ENVKLAREYALLGNYDSAMVYYQGVLD 40 (78)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcChHHHHHHHHHHHH
Confidence 456788889999999999999998764
No 325
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=37.63 E-value=74 Score=31.14 Aligned_cols=31 Identities=10% Similarity=-0.189 Sum_probs=26.7
Q ss_pred CHHHHHHHHHHHHHcCChHHHHHHHHHHHHh
Q 015029 69 MSKAYWRKATACMKLEEYETAKVALEKGASL 99 (414)
Q Consensus 69 ~~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l 99 (414)
..-|+..+|.+|..+|+|++|...++.++..
T Consensus 189 k~aa~allarvyL~~~~~~~A~~~a~~vi~~ 219 (454)
T 3myv_A 189 KYAARALLARIYLYHDDNRKAFDLADQLIKD 219 (454)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccHHHHHHHHHHHHhC
Confidence 3568888999999999999999999998853
No 326
>2uwj_G Type III export protein PSCG; virulence, chaperones, coiled coil, needle formation, type III secretion, bacterial pathogenicity; 2.0A {Pseudomonas aeruginosa}
Probab=36.68 E-value=1.1e+02 Score=23.68 Aligned_cols=81 Identities=15% Similarity=-0.100 Sum_probs=46.9
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCh
Q 015029 7 KKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEY 86 (414)
Q Consensus 7 ~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~lg~y 86 (414)
..|....-.-.+++|...-+ .|...+..-.+-.-|...++..|+|++|+...+... .+..---+|.|-.++|-.
T Consensus 11 E~AL~gTG~H~HqEA~tIAd-wL~~~~~~E~v~lIR~sSLmNrG~Yq~Al~l~~~~c-----~pdlepw~ALce~rlGl~ 84 (115)
T 2uwj_G 11 ELALAGSGQHCHEEALCIAE-WLERLGQDEAARLIRISSLANQGRYQEALAFAHGNP-----WPALEPWFALCEWHLGLG 84 (115)
T ss_dssp HHHHHHHTTTCHHHHHHHHH-HHHHTTCHHHHHHHHHHHHHHTTCHHHHHGGGTTCC-----CGGGHHHHHHHHHHTTCH
T ss_pred HHHHHHccchHHHHHHHHHH-HHHhCCcHHHHHHHHHHHHHcchhHHHHHHhcCCCC-----CchHHHHHHHHHHhcccH
Confidence 33444444555666665543 355555544455557777778888888765543322 333334456666777777
Q ss_pred HHHHHHH
Q 015029 87 ETAKVAL 93 (414)
Q Consensus 87 ~~A~~~~ 93 (414)
..+...+
T Consensus 85 s~le~rL 91 (115)
T 2uwj_G 85 AALDRRL 91 (115)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7766655
No 327
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=36.49 E-value=54 Score=24.34 Aligned_cols=11 Identities=9% Similarity=0.108 Sum_probs=4.4
Q ss_pred ccCHHHHHHHH
Q 015029 49 LQNFTEAVADA 59 (414)
Q Consensus 49 l~~~~~Al~~~ 59 (414)
.|+|++|+.+|
T Consensus 29 ~g~y~eAl~lY 39 (86)
T 4a5x_A 29 ESRYPQALVCY 39 (86)
T ss_dssp TTCHHHHHHHH
T ss_pred cCCHHHHHHHH
Confidence 34444444333
No 328
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=34.77 E-value=65 Score=30.93 Aligned_cols=45 Identities=20% Similarity=0.178 Sum_probs=34.7
Q ss_pred HHHHHHHHHHh-----CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q 015029 21 AYDLYSQAIEI-----SPNSAELFADRAQASIKLQNFTEAVADANRAIEL 65 (414)
Q Consensus 21 Ai~~y~~AL~~-----~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l 65 (414)
++.+|.+||.. .....--|..+|.+|++.++|.+|++....|-..
T Consensus 276 ~l~L~~~AI~sa~~yY~n~HvYPYtylgGy~yR~~~~reAl~~WA~Aa~V 325 (472)
T 3re2_A 276 AEELFKEAITVAKREYSDHHIYPYTYLGGYYYRKKKYYEAIASWVDAGYV 325 (472)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCccchhhhhhhhhhcchHHHHHHHHHHHHHH
Confidence 77888888875 2233456788999999999999999987776544
No 329
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=34.47 E-value=1e+02 Score=30.13 Aligned_cols=44 Identities=14% Similarity=0.012 Sum_probs=33.9
Q ss_pred HHHHHHHHHHhC-----CCCHHHHHHHHHHHHHcCChHHHHHHHHHHHH
Q 015029 55 AVADANRAIELE-----PSMSKAYWRKATACMKLEEYETAKVALEKGAS 98 (414)
Q Consensus 55 Al~~~~~Ai~l~-----p~~~~a~~~~g~~~~~lg~y~~A~~~~~~a~~ 98 (414)
++..|.+||... ..+.-.|.++|-.|++.++|.+|+.++..+-.
T Consensus 298 ~~~L~~~AI~sa~~~Y~n~HvYPYtYlgGy~yR~~~~reAl~~WA~Aa~ 346 (550)
T 3u84_A 298 PLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNRNVREALQAWADTAT 346 (550)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCccceeecchhhhhcchHHHHHHHHHHHHH
Confidence 566666666553 34667888899999999999999998887644
No 330
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=34.03 E-value=87 Score=30.70 Aligned_cols=30 Identities=17% Similarity=-0.004 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHh
Q 015029 70 SKAYWRKATACMKLEEYETAKVALEKGASL 99 (414)
Q Consensus 70 ~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l 99 (414)
.-|+..+|.+|..+|+|++|...++.++..
T Consensus 196 ~aa~allArvyL~~~~~~~A~~~a~~vi~~ 225 (461)
T 3kez_A 196 WAAMTLLSRVYLYKGEYNEALTMAENAIKG 225 (461)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 568888999999999999999999988753
No 331
>3may_A RV0203, possible exported protein; helical protein, heme-binding protein; 2.50A {Mycobacterium tuberculosis}
Probab=33.98 E-value=28 Score=26.83 Aligned_cols=31 Identities=16% Similarity=0.129 Sum_probs=27.9
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHhhhhhcCCe
Q 015029 355 ALNKFFQEIYADADEDTRRAMKKSFVESNGT 385 (414)
Q Consensus 355 ~~~~~f~~iY~~~d~d~kram~KS~~eS~gt 385 (414)
++|.||-.|++....++.|+=+|+|.+.|=.
T Consensus 31 ~vN~~~T~~~~q~p~~q~~a~v~~Yf~aNPq 61 (101)
T 3may_A 31 ETNQVMTAVLQQQVGPGSVASLKAHFEANPK 61 (101)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHCHH
T ss_pred CHHHHHHHHHccCChHHHHHHHHHHHHhCcH
Confidence 5899999999998899999999999998843
No 332
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=33.50 E-value=60 Score=24.73 Aligned_cols=37 Identities=8% Similarity=0.164 Sum_probs=25.6
Q ss_pred HHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHHH
Q 015029 74 WRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLI 110 (414)
Q Consensus 74 ~~~g~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l 110 (414)
..+|..+...|+++.|+.+|-+|+.+.|.-..+...+
T Consensus 24 V~lGE~L~~~g~~e~av~Hf~nAl~Vc~qP~~LL~i~ 60 (95)
T 1om2_A 24 IQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLLQVL 60 (95)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHSCHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 3477777788888888887778887777654444443
No 333
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=33.03 E-value=64 Score=24.25 Aligned_cols=16 Identities=13% Similarity=-0.193 Sum_probs=7.2
Q ss_pred HHHHHHHHHHhCCCCH
Q 015029 89 AKVALEKGASLAPGDS 104 (414)
Q Consensus 89 A~~~~~~a~~l~p~~~ 104 (414)
|++.|..++...++..
T Consensus 41 Aie~l~~alk~e~~~~ 56 (93)
T 1wfd_A 41 GIDMLLQVLKGTKESS 56 (93)
T ss_dssp HHHHHHHHHHTCCCHH
T ss_pred HHHHHHHHHHHCCCHH
Confidence 3444444444454433
No 334
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=32.50 E-value=97 Score=30.72 Aligned_cols=30 Identities=20% Similarity=0.168 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHh
Q 015029 70 SKAYWRKATACMKLEEYETAKVALEKGASL 99 (414)
Q Consensus 70 ~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l 99 (414)
.-|+..+|.+|..+++|++|...++.++..
T Consensus 203 ~aA~allArvyL~~~~~~~A~~~a~~vi~~ 232 (495)
T 3lew_A 203 EVVLGILSRACLYARQWEKAKTYSDKLLAK 232 (495)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 458888999999999999999999888865
No 335
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=32.17 E-value=60 Score=25.63 Aligned_cols=42 Identities=17% Similarity=0.130 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHH-------HHHHHHHHHHhCCCCHHHHH
Q 015029 52 FTEAVADANRAIELEPSMSKAYWRKATACMKLEEYET-------AKVALEKGASLAPGDSRFTN 108 (414)
Q Consensus 52 ~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~lg~y~~-------A~~~~~~a~~l~p~~~~~~~ 108 (414)
+..|+..+.+|+.. -..|+|++ |++.|..+++..+.+.....
T Consensus 15 l~kAi~lv~~Ave~---------------D~ag~y~eAl~lY~~Aie~l~~alk~e~~~~~~k~ 63 (117)
T 2cpt_A 15 LQKAIDLASKAAQE---------------DKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQ 63 (117)
T ss_dssp HHHHHHHHHHHHHH---------------HHHTCHHHHHHHHHHHHHHHHHHHHTSCCCHHHHH
T ss_pred HHHHHHHHHHHHHH---------------HHccCHHHHHHHHHHHHHHHHHHHHhccCCHHHHH
Confidence 45677777777644 33344444 44555555556655665333
No 336
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=31.94 E-value=74 Score=31.10 Aligned_cols=46 Identities=15% Similarity=0.096 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHh-----CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q 015029 20 LAYDLYSQAIEI-----SPNSAELFADRAQASIKLQNFTEAVADANRAIEL 65 (414)
Q Consensus 20 ~Ai~~y~~AL~~-----~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l 65 (414)
.++.+|.+||.. .....--|..+|.+|++.++|.+|+.....|-..
T Consensus 297 ~~~~L~~~AI~sa~~~Y~n~HvYPYtYlgGy~yR~~~~reAl~~WA~Aa~V 347 (550)
T 3u84_A 297 DPLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNRNVREALQAWADTATV 347 (550)
T ss_dssp CHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhccCCccceeecchhhhhcchHHHHHHHHHHHHHH
Confidence 367778888775 2233456788999999999999999877666543
No 337
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=31.53 E-value=71 Score=23.35 Aligned_cols=10 Identities=20% Similarity=0.358 Sum_probs=3.9
Q ss_pred HHHHHHHHHH
Q 015029 54 EAVADANRAI 63 (414)
Q Consensus 54 ~Al~~~~~Ai 63 (414)
.|+..+.+|+
T Consensus 12 ~A~~l~~~Av 21 (85)
T 2v6x_A 12 KGIELVQKAI 21 (85)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3443344443
No 338
>2p58_C Putative type III secretion protein YSCG; type III secretion system, structure, needle protein, YSCE, YSCF, transport protein/chaperone complex; 1.80A {Yersinia pestis}
Probab=31.01 E-value=1.9e+02 Score=22.48 Aligned_cols=84 Identities=13% Similarity=-0.030 Sum_probs=54.2
Q ss_pred HHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhh
Q 015029 40 ADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKEFVGLLMQ 119 (414)
Q Consensus 40 ~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~ 119 (414)
..+|.+-......++|...++- +...+..--+-+-+...+.+.|+|++|....+.. + -+.+.-|++-|.-.++.
T Consensus 11 AE~AL~gTG~H~HqEA~tIAdw-L~~~~~~E~v~lIR~sSLmNrG~Yq~Al~l~~~~----c-~pdlepw~ALce~rlGl 84 (116)
T 2p58_C 11 AEIALIGTGNHYHEEANCIAEW-LHLKGEEEAVQLIRLSSLMNRGDYASALQQGNKL----A-YPDLEPWLALCEYRLGL 84 (116)
T ss_dssp HHHHHHHHTTTCHHHHHHHHHH-HHHTTCHHHHHHHHHHHHHHTTCHHHHHHHHTTS----C-CGGGHHHHHHHHHHHTC
T ss_pred HHHHHHHccchHHHHHHHHHHH-HHhCCcHHHHHHHHHHHHHcchhHHHHHHhcCCC----C-CchHHHHHHHHHHhccc
Confidence 3344443445577887665544 4455554446667788899999999998765432 1 56788888888866666
Q ss_pred hhhhhhhHHH
Q 015029 120 NAVYLCWNYE 129 (414)
Q Consensus 120 ~~~~~~~~~~ 129 (414)
......|...
T Consensus 85 ~s~le~rL~~ 94 (116)
T 2p58_C 85 GSALESRLNR 94 (116)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 5555555433
No 339
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=30.86 E-value=93 Score=30.59 Aligned_cols=32 Identities=16% Similarity=0.001 Sum_probs=27.1
Q ss_pred CHHHHHHHHHHHHHcCChHHHHHHHHHHHHhC
Q 015029 69 MSKAYWRKATACMKLEEYETAKVALEKGASLA 100 (414)
Q Consensus 69 ~~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l~ 100 (414)
-.-|+..+|.+|..+|+|++|...++.++...
T Consensus 201 k~aa~allarvyL~~~~~~~A~~~a~~vi~~~ 232 (477)
T 3mcx_A 201 YWAAQALLSRVYLNMGEYQKAYDAATDVIKNN 232 (477)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhCC
Confidence 35588889999999999999999999988754
No 340
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=30.43 E-value=2.5e+02 Score=24.78 Aligned_cols=50 Identities=16% Similarity=0.046 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCC
Q 015029 53 TEAVADANRAIELE--PSMSKAYWRKATACMKLEEYETAKVALEKGASLAPG 102 (414)
Q Consensus 53 ~~Al~~~~~Ai~l~--p~~~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p~ 102 (414)
.++...|....... -..+..|-..|..|...|+|.+|...|+.+++..-.
T Consensus 131 ~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A~ 182 (223)
T 4aez_C 131 DEPVELFSFLAHHHIGQESSIFYEEYANYFESRGLFQKADEVYQKGKRMKAK 182 (223)
T ss_dssp SCHHHHHHHHHHTTCSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCB
T ss_pred CCHHHHHHHHHHCCcchhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCc
Confidence 35566666666544 457778888999999999999999999999987643
No 341
>2uwj_G Type III export protein PSCG; virulence, chaperones, coiled coil, needle formation, type III secretion, bacterial pathogenicity; 2.0A {Pseudomonas aeruginosa}
Probab=30.18 E-value=1.6e+02 Score=22.78 Aligned_cols=81 Identities=15% Similarity=-0.056 Sum_probs=52.4
Q ss_pred HHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhhhhh
Q 015029 43 AQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKEFVGLLMQNAV 122 (414)
Q Consensus 43 a~~~~kl~~~~~Al~~~~~Ai~l~p~~~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~~ 122 (414)
|.+-......++|...++- +...+..--+-+-+...+.+.|+|++|....+.. + -+.+.-|++-|.-.++....
T Consensus 13 AL~gTG~H~HqEA~tIAdw-L~~~~~~E~v~lIR~sSLmNrG~Yq~Al~l~~~~----c-~pdlepw~ALce~rlGl~s~ 86 (115)
T 2uwj_G 13 ALAGSGQHCHEEALCIAEW-LERLGQDEAARLIRISSLANQGRYQEALAFAHGN----P-WPALEPWFALCEWHLGLGAA 86 (115)
T ss_dssp HHHHHTTTCHHHHHHHHHH-HHHTTCHHHHHHHHHHHHHHTTCHHHHHGGGTTC----C-CGGGHHHHHHHHHHTTCHHH
T ss_pred HHHHccchHHHHHHHHHHH-HHhCCcHHHHHHHHHHHHHcchhHHHHHHhcCCC----C-CchHHHHHHHHHHhcccHHH
Confidence 3333344567787655543 4455554445667788899999999998655421 1 56788888888866666666
Q ss_pred hhhhHHH
Q 015029 123 YLCWNYE 129 (414)
Q Consensus 123 ~~~~~~~ 129 (414)
...|...
T Consensus 87 le~rL~~ 93 (115)
T 2uwj_G 87 LDRRLAG 93 (115)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5555543
No 342
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=29.92 E-value=3.5e+02 Score=25.37 Aligned_cols=27 Identities=19% Similarity=0.097 Sum_probs=24.2
Q ss_pred CCHHHHHHHHHHHHHcCChHHHHHHHH
Q 015029 68 SMSKAYWRKATACMKLEEYETAKVALE 94 (414)
Q Consensus 68 ~~~~a~~~~g~~~~~lg~y~~A~~~~~ 94 (414)
.++..|..+|..|+..++|.+|..+|-
T Consensus 134 Gdp~LH~~ig~~~~~e~~~~~Ae~H~i 160 (336)
T 3lpz_A 134 GDPELHHVVGTLYVEEGEFEAAEKHLV 160 (336)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHccCCHHHHHHHHH
Confidence 478899999999999999999998883
No 343
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=28.48 E-value=1.9e+02 Score=31.99 Aligned_cols=73 Identities=5% Similarity=-0.099 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHH-----hCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHh--CCCCHHHHHH
Q 015029 37 ELFADRAQASIKLQNFTEAVADANRAIE-----LEPSMSKAYWRKATACMKLEEYETAKVALEKGASL--APGDSRFTNL 109 (414)
Q Consensus 37 ~~~~~ra~~~~kl~~~~~Al~~~~~Ai~-----l~p~~~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l--~p~~~~~~~~ 109 (414)
..|..+-.+|.+.|+.++|...|....+ +.| +...|.-+-..|.+.|++++|...|...... .|+-..+...
T Consensus 128 ~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~P-dvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~PDvvTYntL 206 (1134)
T 3spa_A 128 QRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLL-TLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTPDLLSYAAA 206 (1134)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTC-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCC-CHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCcHHHHHHH
Confidence 3467777899999999999999976543 234 6778888999999999999999999998764 4654444333
Q ss_pred H
Q 015029 110 I 110 (414)
Q Consensus 110 l 110 (414)
+
T Consensus 207 I 207 (1134)
T 3spa_A 207 L 207 (1134)
T ss_dssp H
T ss_pred H
Confidence 3
No 344
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=27.96 E-value=95 Score=30.35 Aligned_cols=46 Identities=15% Similarity=0.096 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHh-----CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q 015029 20 LAYDLYSQAIEI-----SPNSAELFADRAQASIKLQNFTEAVADANRAIEL 65 (414)
Q Consensus 20 ~Ai~~y~~AL~~-----~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l 65 (414)
.++.+|.+||.. .-...-.|..+|.+|++.++|.+|++.+..|-..
T Consensus 282 ~~~~Lf~~AI~~ar~~Y~~~hvYPYtYlgG~~~R~~~~~eAl~~wa~aa~V 332 (489)
T 4gq4_A 282 DPLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNRNVREALQAWADTATV 332 (489)
T ss_dssp CHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhcccCcccceeecchHHHHhhhHHHHHHHhhhhhhh
Confidence 366778887774 2233556888899999999999999988877544
No 345
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=26.90 E-value=1.9e+02 Score=21.62 Aligned_cols=56 Identities=11% Similarity=-0.038 Sum_probs=38.9
Q ss_pred HHHHHHHHccCHHHHHHHHHHHHHhCCCC----HHHHHHHHHHHH--HcCChHHHHHHHHHHHH
Q 015029 41 DRAQASIKLQNFTEAVADANRAIELEPSM----SKAYWRKATACM--KLEEYETAKVALEKGAS 98 (414)
Q Consensus 41 ~ra~~~~kl~~~~~Al~~~~~Ai~l~p~~----~~a~~~~g~~~~--~lg~y~~A~~~~~~a~~ 98 (414)
..|..++..|+|-+|-..++.+....+.. .....+++.+++ ..|+. |...|.+++.
T Consensus 6 ~~~~~lfn~g~~~eaHEvlE~~W~~~~~~~~~~~qGLIq~Ava~~h~~~gn~--a~~ll~~a~~ 67 (94)
T 2cwy_A 6 EEVLGLWRAGRYYEVHEVLEPYWLKATGEERRLLQGVILLAAALHQRRLGRP--GLRNLRKAEA 67 (94)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHHH
T ss_pred HHHHHHHhCCChHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHcCcH--HHHHHHHHHH
Confidence 45677778899999999999999888542 234445555544 45666 7777777765
No 346
>1sz9_A PCF11 protein; RNA polymerase II CTD interacting domain, arm repeats, transcription; 2.10A {Saccharomyces cerevisiae} SCOP: a.118.9.4 PDB: 1sza_A* 2bf0_X
Probab=26.57 E-value=42 Score=27.51 Aligned_cols=22 Identities=23% Similarity=0.403 Sum_probs=15.5
Q ss_pred HHHHHHHHhcCCCHHHHHHHHh
Q 015029 356 LNKFFQEIYADADEDTRRAMKK 377 (414)
Q Consensus 356 ~~~~f~~iY~~~d~d~kram~K 377 (414)
+...|...|..+|+++|+.|++
T Consensus 86 l~~~f~~~~~~~d~~~r~k~~r 107 (144)
T 1sz9_A 86 LFNLYKRTYLLVDNTTRTKLIN 107 (144)
T ss_dssp HHHHHHHHHHTSCHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHH
Confidence 5666777777777777776665
No 347
>2pmr_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.32A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.8.11.1
Probab=26.41 E-value=68 Score=23.98 Aligned_cols=39 Identities=8% Similarity=-0.045 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q 015029 18 FELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIE 64 (414)
Q Consensus 18 y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~ 64 (414)
+..|...++-| ..|+.-|..|++.|++..|+.++.-+-.
T Consensus 29 ~~~a~~~l~mA--------~~Y~~Da~~fl~kGD~v~Ala~isYa~G 67 (87)
T 2pmr_A 29 SDDEEAVVERA--------LNYRDDSVYYLEKGDHITSFGCITYAHG 67 (87)
T ss_dssp CHHHHHHHHHH--------HHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHH--------HHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 44566666553 3577777788888888888887766653
No 348
>2oo2_A Hypothetical protein AF_1782; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Archaeoglobus fulgidus dsm 4304} SCOP: a.8.11.1
Probab=26.36 E-value=69 Score=23.90 Aligned_cols=25 Identities=8% Similarity=0.061 Sum_probs=13.3
Q ss_pred HHHHHHHHHHHccCHHHHHHHHHHH
Q 015029 38 LFADRAQASIKLQNFTEAVADANRA 62 (414)
Q Consensus 38 ~~~~ra~~~~kl~~~~~Al~~~~~A 62 (414)
.|+.-|..|++.|++..|+.++.-+
T Consensus 37 ~Y~~Da~~fl~kGD~v~Ala~isYa 61 (86)
T 2oo2_A 37 AYISDSRYFLEKGDLVRAFECVVWA 61 (86)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 3444555555555555555555444
No 349
>2rkl_A Vacuolar protein sorting-associated protein VTA1; dimerization motif, cytoplasm, endosome, lipid transport, membrane, protein transport; 1.50A {Saccharomyces cerevisiae} PDB: 3mhv_A
Probab=25.78 E-value=1.1e+02 Score=20.59 Aligned_cols=30 Identities=23% Similarity=0.225 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 015029 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEI 31 (414)
Q Consensus 2 Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~ 31 (414)
|+.+...+..++.-.|...|+..+.+||++
T Consensus 20 AqK~aK~AiSAL~feDv~tA~~~L~~AL~l 49 (53)
T 2rkl_A 20 IQKLAKYAISALNYEDLPTAKDELTKALDL 49 (53)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccccHHHHHHHHHHHHHH
Confidence 456666677777777777777777777764
No 350
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=24.93 E-value=1.3e+02 Score=29.27 Aligned_cols=14 Identities=29% Similarity=0.204 Sum_probs=10.9
Q ss_pred HHHHHHHHHHHHHc
Q 015029 36 AELFADRAQASIKL 49 (414)
Q Consensus 36 ~~~~~~ra~~~~kl 49 (414)
.++++.||.+|+.+
T Consensus 111 gEa~flRA~~yf~L 124 (454)
T 3myv_A 111 GETMAVIALCQFDL 124 (454)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 47788888888776
No 351
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=24.48 E-value=1.2e+02 Score=29.93 Aligned_cols=61 Identities=11% Similarity=-0.043 Sum_probs=45.9
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCC--C--------CHHHHHHHHHHHHHccCHHHHHHHHHHHHHh-CCCC
Q 015029 9 AKEAFIDDYFELAYDLYSQAIEISP--N--------SAELFADRAQASIKLQNFTEAVADANRAIEL-EPSM 69 (414)
Q Consensus 9 g~~~~~~g~y~~Ai~~y~~AL~~~P--~--------~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l-~p~~ 69 (414)
-..||+.++...+-..+...-...+ . -..+++.+|..++..++|.+|..++..|++. .|..
T Consensus 183 ~kiYFkl~~~~lckni~k~i~~~~~~p~~~~~p~~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~~ 254 (455)
T 3t5v_B 183 NNIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQLDQQIEYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNLP 254 (455)
T ss_dssp HHHHHHSSCCTTHHHHHHTHHHHCCCSCGGGSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHcCCHHHHHHHHHHhccCCCCcChhhCCccceEeeeHHHHHHHHHHccHHHHHHHHHHHHHhcCCcc
Confidence 3678888888888777743322221 1 1578899999999999999999999999998 6643
No 352
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=24.42 E-value=4.6e+02 Score=24.85 Aligned_cols=87 Identities=6% Similarity=-0.085 Sum_probs=57.7
Q ss_pred HHHcCCHHHHHHHHHHHHHhC-------C--------CC--HHHHHHHHHHHHHccCHHHHHHHHHHHHHh-----CCC-
Q 015029 12 AFIDDYFELAYDLYSQAIEIS-------P--------NS--AELFADRAQASIKLQNFTEAVADANRAIEL-----EPS- 68 (414)
Q Consensus 12 ~~~~g~y~~Ai~~y~~AL~~~-------P--------~~--~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l-----~p~- 68 (414)
.-...+..+|++++......- . .. ..+....+..|+..+++..|....+++-.. +.+
T Consensus 86 ~~~~~d~~~al~~L~~~~~~~~~~~~~~~~~~~~~~~~ea~l~i~~~i~~~yl~~~d~~~a~~~l~~~~~~l~~~~~~~~ 165 (393)
T 4b4t_O 86 LKDSKDFDESLKYLDDLKAQFQELDSKKQRNNGSKDHGDGILLIDSEIARTYLLKNDLVKARDLLDDLEKTLDKKDSIPL 165 (393)
T ss_dssp HHHTTCHHHHHHHHHHHTTTSHHHHSSCCCCCCSSSSCCSHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSCCSSS
T ss_pred HhhcCCHHHHHHHHHHHHHHHhhhhhhhhcccchhhhhhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhhccCCccH
Confidence 345678999999988753221 0 01 344566788888999999999888888654 111
Q ss_pred --CHHHHHHHHHHHHHcCChHHHHHHHHHHHH
Q 015029 69 --MSKAYWRKATACMKLEEYETAKVALEKGAS 98 (414)
Q Consensus 69 --~~~a~~~~g~~~~~lg~y~~A~~~~~~a~~ 98 (414)
....|...+..|...++|..+...+-.++.
T Consensus 166 ~v~~~~y~~~~~~~~~~~~~a~~y~~~l~~l~ 197 (393)
T 4b4t_O 166 RITNSFYSTNSQYFKFKNDFNSFYYTSLLYLS 197 (393)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 233444466667778888887776666554
No 353
>3ph0_C ASCG; type III secretion system, chapero; 2.40A {Aeromonas hydrophila}
Probab=23.73 E-value=1.8e+02 Score=19.88 Aligned_cols=40 Identities=20% Similarity=0.189 Sum_probs=14.8
Q ss_pred cCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHHcCChHHHH
Q 015029 50 QNFTEAVADANRAIELEPSM-SKAYWRKATACMKLEEYETAK 90 (414)
Q Consensus 50 ~~~~~Al~~~~~Ai~l~p~~-~~a~~~~g~~~~~lg~y~~A~ 90 (414)
...++|...++ .+...+.. --+-+-+...+.+.|+|++|+
T Consensus 20 HcH~EA~tIA~-~L~~~~~~eE~v~mIr~~SLmNrG~Yq~Al 60 (61)
T 3ph0_C 20 HCHQEAASIAD-WLAQEECMAECVTLIRLSSLMNQGDYQRAL 60 (61)
T ss_dssp TCHHHHHHHHH-HHHTSSTTHHHHHHHHHHHHHHC-------
T ss_pred hHHHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHccchHhHhh
Confidence 34555544332 23333332 223444555566666666654
No 354
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=23.65 E-value=2e+02 Score=23.71 Aligned_cols=50 Identities=14% Similarity=-0.001 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCC
Q 015029 53 TEAVADANRAIELE--PSMSKAYWRKATACMKLEEYETAKVALEKGASLAPG 102 (414)
Q Consensus 53 ~~Al~~~~~Ai~l~--p~~~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p~ 102 (414)
.++...|......+ -..+..|-..|..+...|+|.+|.+.|+.+++..-.
T Consensus 82 ~dp~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A~ 133 (152)
T 4a1g_A 82 SDLHQFFEFLYNHGIGTLSSPLYIAWAGHLEAQGELQHASAVLQRGIQNQAE 133 (152)
T ss_dssp SCHHHHHHHHHTTTTTTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCB
T ss_pred CCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCc
Confidence 34666676666543 457788888999999999999999999999987543
No 355
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=23.56 E-value=1.7e+02 Score=28.83 Aligned_cols=14 Identities=21% Similarity=0.199 Sum_probs=11.0
Q ss_pred HHHHHHHHHHHHHc
Q 015029 36 AELFADRAQASIKL 49 (414)
Q Consensus 36 ~~~~~~ra~~~~kl 49 (414)
.++++.||.+|+.+
T Consensus 119 gEA~flRA~~Yf~L 132 (495)
T 3lew_A 119 GQALALRGFLYLHL 132 (495)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 57888888888875
No 356
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=23.19 E-value=1.7e+02 Score=29.09 Aligned_cols=30 Identities=20% Similarity=0.124 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHh
Q 015029 70 SKAYWRKATACMKLEEYETAKVALEKGASL 99 (414)
Q Consensus 70 ~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l 99 (414)
.-|+..+|.+|..+++|++|...++.++..
T Consensus 182 ~aA~allarv~L~~~~~~~A~~~a~~vi~~ 211 (517)
T 3qnk_A 182 GAAYALKSRVELYDKRYEDVIKSCAEVYKL 211 (517)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 458888999999999999999999988853
No 357
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=22.66 E-value=1.7e+02 Score=26.48 Aligned_cols=15 Identities=27% Similarity=0.242 Sum_probs=7.2
Q ss_pred ccCHHHHHHHHHHHH
Q 015029 49 LQNFTEAVADANRAI 63 (414)
Q Consensus 49 l~~~~~Al~~~~~Ai 63 (414)
+++.++|+..+..|+
T Consensus 211 ln~~~~Ac~lAk~Af 225 (260)
T 2npm_A 211 LNEPRAAIDMAKEAF 225 (260)
T ss_dssp SCCHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHH
Confidence 345555555444444
No 358
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.46 E-value=1.1e+02 Score=24.05 Aligned_cols=47 Identities=11% Similarity=0.241 Sum_probs=29.5
Q ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC
Q 015029 14 IDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPS 68 (414)
Q Consensus 14 ~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~ 68 (414)
....|++|..+.++||.++- .+.-...+.-|.+++..++++|.+...
T Consensus 15 ik~~h~~AF~~Is~AL~~DE--------~g~k~~Al~lYk~GI~eLe~Gl~I~~~ 61 (116)
T 2dl1_A 15 IREAYKKAFLFVNKGLNTDE--------LGQKEEAKNYYKQGIGHLLRGISISSK 61 (116)
T ss_dssp HHHHHHHHHHHHHHHHHHHH--------HTCHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred HHHHHHHHHHHHHHHhhhhh--------cCCHHHHHHHHHHHHHHHHHhcccccc
Confidence 34557888888888888763 133333334466667777777776653
No 359
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=22.06 E-value=1.5e+02 Score=28.97 Aligned_cols=14 Identities=29% Similarity=0.278 Sum_probs=10.7
Q ss_pred HHHHHHHHHHHHHc
Q 015029 36 AELFADRAQASIKL 49 (414)
Q Consensus 36 ~~~~~~ra~~~~kl 49 (414)
.++++.||.+|+.+
T Consensus 117 gEA~flRA~~yf~L 130 (461)
T 3kez_A 117 GQALAIRGMALFDL 130 (461)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 46778888888776
No 360
>2ymb_A MITD1, MIT domain-containing protein 1; protein transport, membrane, PLD; 3.40A {Homo sapiens}
Probab=22.03 E-value=19 Score=32.83 Aligned_cols=16 Identities=19% Similarity=0.214 Sum_probs=0.0
Q ss_pred CHHHHHHHHHHHHHhC
Q 015029 17 YFELAYDLYSQAIEIS 32 (414)
Q Consensus 17 ~y~~Ai~~y~~AL~~~ 32 (414)
....|+.+..+|++.+
T Consensus 19 ~~~~Ai~lv~~AVe~D 34 (257)
T 2ymb_A 19 QSTAAATVLKRAVELD 34 (257)
T ss_dssp ----------------
T ss_pred hHHHHHHHHHHHHHHH
Confidence 3456777777777665
No 361
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=21.92 E-value=1.3e+02 Score=28.12 Aligned_cols=64 Identities=9% Similarity=-0.018 Sum_probs=45.0
Q ss_pred CHHHHHHHHHHHHHccCHHHHHHHHHHHH----------------Hh---CCCCHHHHHHHHHH-HHHcCChHHHHHHHH
Q 015029 35 SAELFADRAQASIKLQNFTEAVADANRAI----------------EL---EPSMSKAYWRKATA-CMKLEEYETAKVALE 94 (414)
Q Consensus 35 ~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai----------------~l---~p~~~~a~~~~g~~-~~~lg~y~~A~~~~~ 94 (414)
++.++..+|..|.+.+++.+|..+|-..- .+ .|.....+.-+|+. |..+|+...|...|.
T Consensus 133 dp~LH~~~a~~~~~e~~~~~A~~H~i~~~~~s~~~~a~~l~~w~~~~~~~~~~e~dlf~~RaVL~yL~l~n~~~A~~~~~ 212 (312)
T 2wpv_A 133 DPYLHNTIGSKLLEGDFVYEAERYFMLGTHDSMIKYVDLLWDWLCQVDDIEDSTVAEFFSRLVFNYLFISNISFAHESKD 212 (312)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHTTBHHHHHHHHH
T ss_pred CHHHHHHHHHHHhhcCCHHHHHHHHHhCCCccHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 47889999999999999999988774221 11 12234455556654 678999999999888
Q ss_pred HHHH
Q 015029 95 KGAS 98 (414)
Q Consensus 95 ~a~~ 98 (414)
....
T Consensus 213 ~f~~ 216 (312)
T 2wpv_A 213 IFLE 216 (312)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6653
No 362
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=21.52 E-value=1.2e+02 Score=26.96 Aligned_cols=13 Identities=15% Similarity=0.015 Sum_probs=6.0
Q ss_pred cCChHHHHHHHHH
Q 015029 83 LEEYETAKVALEK 95 (414)
Q Consensus 83 lg~y~~A~~~~~~ 95 (414)
+++.+.|....++
T Consensus 186 l~~~~~A~~lAk~ 198 (234)
T 2br9_A 186 LNSPDRACRLAKA 198 (234)
T ss_dssp SCCHHHHHHHHHH
T ss_pred cCCHHHHHHHHHH
Confidence 4555544443333
No 363
>2xze_A STAM-binding protein; hydrolase-protein transport complex; 1.75A {Homo sapiens}
Probab=21.43 E-value=1.1e+02 Score=24.99 Aligned_cols=25 Identities=20% Similarity=0.244 Sum_probs=11.6
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHH
Q 015029 3 TDLEKKAKEAFIDDYFELAYDLYSQ 27 (414)
Q Consensus 3 e~~~~~g~~~~~~g~y~~Ai~~y~~ 27 (414)
..+...|..+...|+++.|.-+|-+
T Consensus 41 ~~llr~A~~y~~egd~e~AYily~R 65 (146)
T 2xze_A 41 VEIIRMASIYSEEGNIEHAFILYNK 65 (146)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 3344444444444444444444444
No 364
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=21.40 E-value=1.1e+02 Score=24.28 Aligned_cols=51 Identities=16% Similarity=0.379 Sum_probs=37.0
Q ss_pred ccCCCeEEEEEEeCCCCCCceEEEEeee-EEEEEEEcCCC-Ceeeecc-ccccc
Q 015029 219 YQKPEEVVVTVFAKGIPAKNVTVDFGEQ-ILSVSIDVPGE-EAYHFQP-RLFGK 269 (414)
Q Consensus 219 ~Qt~~~V~i~i~~k~~~~~~v~v~~~~~-~l~v~~~~~~~-~~y~~~~-~L~~~ 269 (414)
.|.++.|.++|.+.|.....+.++|... .+.|.+...+| ..|.++= +.|-.
T Consensus 14 ~~~g~~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQ 67 (120)
T 3isy_A 14 IQEPEQIKFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQ 67 (120)
T ss_dssp EECSSCEEEEEEEEECSSSCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCC
T ss_pred ccCCCeEEEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhh
Confidence 4567789999999999889999999874 56888765433 4465554 46655
No 365
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=20.74 E-value=3e+02 Score=22.60 Aligned_cols=49 Identities=14% Similarity=0.059 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHh--CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC
Q 015029 20 LAYDLYSQAIEI--SPNSAELFADRAQASIKLQNFTEAVADANRAIELEPS 68 (414)
Q Consensus 20 ~Ai~~y~~AL~~--~P~~~~~~~~ra~~~~kl~~~~~Al~~~~~Ai~l~p~ 68 (414)
++...|.-.... .-..+.+|..-|..+...|++.+|...|...|+.+..
T Consensus 83 dp~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A~ 133 (152)
T 4a1g_A 83 DLHQFFEFLYNHGIGTLSSPLYIAWAGHLEAQGELQHASAVLQRGIQNQAE 133 (152)
T ss_dssp CHHHHHHHHHTTTTTTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCB
T ss_pred CHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCc
Confidence 366666665543 4556888999999999999999999999999987653
No 366
>3clj_A Protein NRD1; CTD-interacting domain, nucleus, phosphoprotein, RNA polymer binding protein, RNA binding protein; 2.10A {Saccharomyces cerevisiae}
Probab=20.29 E-value=57 Score=27.30 Aligned_cols=22 Identities=9% Similarity=0.439 Sum_probs=18.4
Q ss_pred HHHHHHHHhcCCCHHHHHHHHh
Q 015029 356 LNKFFQEIYADADEDTRRAMKK 377 (414)
Q Consensus 356 ~~~~f~~iY~~~d~d~kram~K 377 (414)
+-.||..+|..+++|+|+.|.|
T Consensus 101 i~~l~~~~~~~~~~~~k~Ki~k 122 (157)
T 3clj_A 101 IQELLSDAIAKSNQDHKEKIRM 122 (157)
T ss_dssp HHHHHHHHHHHSCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHH
Confidence 5678888899999999998866
No 367
>3i4g_A SUSD-like carbohydrate binding protein BF1063; structural genomics, center for structural genomics, JCSG; HET: MSE EPE; 1.35A {Bacteroides fragilis nctc 9343}
Probab=20.26 E-value=2.5e+02 Score=27.98 Aligned_cols=63 Identities=19% Similarity=0.106 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHcc----------------------------CHHHHHHHHHHHHHhCC-------------CCHHHHH
Q 015029 36 AELFADRAQASIKLQ----------------------------NFTEAVADANRAIELEP-------------SMSKAYW 74 (414)
Q Consensus 36 ~~~~~~ra~~~~kl~----------------------------~~~~Al~~~~~Ai~l~p-------------~~~~a~~ 74 (414)
.++++.||.+|+.+- -|+.-+.+++.|+.+=| ...-|+.
T Consensus 123 aEa~flRA~~Yf~L~~~yG~VPl~~~~~~~~~~~~~~r~~~~ev~~~I~~DL~~A~~~Lp~~~~~~~~~~gr~tk~aA~a 202 (528)
T 3i4g_A 123 AEARFLRATQYFYLASYFKNVPLVENVLTGEEANNVTKTSQADILKWCVTEFTAAAADLPRFSAIPAGEAGRACKQAALA 202 (528)
T ss_dssp HHHHHHHHHHHHHHHHHTCSBCCCCSCCCHHHHTTCCCBCHHHHHHHHHHHHHHHHHHSCCGGGCCGGGTTSCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCcceeCCCCCccccccCCCCCHHHHHHHHHHHHHHHHHhCCccccCCcccCCcCcHHHHHH
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHH
Q 015029 75 RKATACMKLEEYETAKVALEKGAS 98 (414)
Q Consensus 75 ~~g~~~~~lg~y~~A~~~~~~a~~ 98 (414)
.+|.+|...++|++|...++.++.
T Consensus 203 llarv~L~~~~~~~A~~~a~~vi~ 226 (528)
T 3i4g_A 203 FLGRTCMLQKDWKSGAKAFHDIME 226 (528)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHh
No 368
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=20.03 E-value=3e+02 Score=22.96 Aligned_cols=49 Identities=14% Similarity=0.094 Sum_probs=0.0
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Q 015029 1 MATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKL 49 (414)
Q Consensus 1 ~Ae~~~~~g~~~~~~g~y~~Ai~~y~~AL~~~P~~~~~~~~ra~~~~kl 49 (414)
.|.-+..-|..+...|+|.+|-+.|..+|+....-..-+...-..+...
T Consensus 95 ~AlfY~~wA~~lE~~~~~~~A~~Iy~~Gi~~~A~P~~~L~~~~~~F~~R 143 (164)
T 2wvi_A 95 LAQFYISWAEEYEARENFRKADAIFQEGIQQKAEPLERLQSQHRQFQAR 143 (164)
T ss_dssp BHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBSHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHH
No 369
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=24.80 E-value=23 Score=37.01 Aligned_cols=59 Identities=14% Similarity=0.105 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhhhhhhhhhHH
Q 015029 70 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKEFVGLLMQNAVYLCWNY 128 (414)
Q Consensus 70 ~~a~~~~g~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~~~~~~~~~~~~~ 128 (414)
..+.+.+|...+..|+|.-|.+.+..++..+|+|..++..++++.++++....-..|+.
T Consensus 461 ~~~~~~~a~~~~~~g~~~wa~~l~~~~~~a~p~~~~ar~l~a~~~~~l~~~~~~~~~rn 519 (668)
T 2yhe_A 461 ADAVLKQMRAAIDKGDYRWAVQLGNHLVFADPANKDARALQADAMEQLGYQTENALWRN 519 (668)
Confidence 45667888889999999999999999999999999999999999988876655555544
Done!