Query 015031
Match_columns 414
No_of_seqs 201 out of 1360
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 05:26:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015031.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015031hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2wme_A BADH, betaine aldehyde 100.0 1.9E-96 7E-101 745.6 45.7 410 1-410 72-485 (490)
2 3ed6_A Betaine aldehyde dehydr 100.0 3.2E-93 1.1E-97 727.6 45.7 412 1-414 100-518 (520)
3 3rh9_A Succinate-semialdehyde 100.0 7.5E-93 2.6E-97 722.6 44.7 406 1-408 77-484 (506)
4 3u4j_A NAD-dependent aldehyde 100.0 8.6E-93 3E-97 725.6 44.5 412 1-414 91-505 (528)
5 3ros_A NAD-dependent aldehyde 100.0 6.4E-93 2.2E-97 720.1 42.5 405 1-408 54-458 (484)
6 3ifg_A Succinate-semialdehyde 100.0 5.6E-93 1.9E-97 721.0 42.1 405 1-407 78-483 (484)
7 1bxs_A Aldehyde dehydrogenase; 100.0 2.9E-92 9.8E-97 718.1 45.9 409 1-409 89-497 (501)
8 2o2p_A Formyltetrahydrofolate 100.0 1.9E-92 6.5E-97 721.4 43.0 407 1-407 104-516 (517)
9 3iwj_A Putative aminoaldehyde 100.0 2.5E-92 8.6E-97 720.0 43.7 412 1-414 78-497 (503)
10 1o04_A Aldehyde dehydrogenase, 100.0 2.4E-92 8.1E-97 718.6 42.4 409 1-409 88-496 (500)
11 4f3x_A Putative aldehyde dehyd 100.0 2.3E-92 7.8E-97 718.4 41.6 406 1-408 90-497 (498)
12 3ek1_A Aldehyde dehydrogenase; 100.0 2.7E-92 9.2E-97 718.2 41.6 405 1-409 98-503 (504)
13 3k2w_A Betaine-aldehyde dehydr 100.0 6.3E-92 2.2E-96 716.1 41.8 410 1-412 78-492 (497)
14 3b4w_A Aldehyde dehydrogenase; 100.0 7.4E-92 2.5E-96 714.7 41.7 406 1-409 76-483 (495)
15 2d4e_A 5-carboxymethyl-2-hydro 100.0 3.6E-91 1.2E-95 712.8 45.7 406 1-409 92-506 (515)
16 1a4s_A ALDH, betaine aldehyde 100.0 1.7E-91 5.8E-96 713.3 43.0 407 1-410 86-498 (503)
17 3qan_A 1-pyrroline-5-carboxyla 100.0 3.4E-91 1.2E-95 715.4 44.0 407 1-410 102-518 (538)
18 3jz4_A Succinate-semialdehyde 100.0 6.6E-91 2.2E-95 706.9 45.4 405 1-407 75-480 (481)
19 3prl_A NADP-dependent glyceral 100.0 4.3E-91 1.5E-95 710.1 43.3 401 1-409 77-484 (505)
20 3r31_A BADH, betaine aldehyde 100.0 1.2E-91 4.1E-96 715.5 38.9 403 1-409 80-489 (517)
21 2ve5_A BADH, betaine aldehyde 100.0 1.2E-90 4E-95 707.1 45.4 409 1-410 72-485 (490)
22 1wnd_A Putative betaine aldehy 100.0 7E-91 2.4E-95 707.0 43.3 404 1-407 88-494 (495)
23 2imp_A Lactaldehyde dehydrogen 100.0 8.7E-91 3E-95 705.7 43.8 405 1-407 72-478 (479)
24 3i44_A Aldehyde dehydrogenase; 100.0 1.5E-90 5.2E-95 704.8 45.5 402 1-406 91-496 (497)
25 4e4g_A Methylmalonate-semialde 100.0 2.7E-90 9.3E-95 706.1 42.8 406 1-409 92-506 (521)
26 3pqa_A Lactaldehyde dehydrogen 100.0 3.8E-90 1.3E-94 700.1 42.5 399 1-409 62-465 (486)
27 3etf_A Putative succinate-semi 100.0 6.4E-90 2.2E-94 697.2 43.7 404 1-407 57-460 (462)
28 2w8n_A Succinate-semialdehyde 100.0 2.3E-90 7.8E-95 703.0 39.1 404 1-407 76-485 (487)
29 3r64_A NAD dependent benzaldeh 100.0 1.1E-89 3.9E-94 701.2 43.8 403 1-409 78-486 (508)
30 1uxt_A Glyceraldehyde-3-phosph 100.0 7.4E-90 2.5E-94 701.0 40.4 401 1-409 83-493 (501)
31 1euh_A NADP dependent non phos 100.0 3E-89 1E-93 693.7 42.2 400 1-408 68-474 (475)
32 2j6l_A Aldehyde dehydrogenase 100.0 3.6E-89 1.2E-93 696.3 43.0 405 1-408 87-499 (500)
33 4dng_A Uncharacterized aldehyd 100.0 1.5E-89 5.1E-94 698.1 39.6 406 1-411 72-481 (485)
34 1uzb_A 1-pyrroline-5-carboxyla 100.0 7.7E-89 2.6E-93 696.3 44.5 404 1-407 102-515 (516)
35 3ty7_A Putative aldehyde dehyd 100.0 7.1E-89 2.4E-93 691.9 38.4 400 1-406 73-475 (478)
36 1t90_A MMSDH, probable methylm 100.0 1.9E-88 6.5E-93 689.2 41.1 408 1-412 71-484 (486)
37 3sza_A Aldehyde dehydrogenase, 100.0 3.6E-87 1.2E-91 676.0 43.3 397 1-408 46-448 (469)
38 4h7n_A Aldehyde dehydrogenase; 100.0 1.6E-87 5.4E-92 680.9 40.4 408 1-414 56-471 (474)
39 4e3x_A Delta-1-pyrroline-5-car 100.0 7.4E-87 2.5E-91 684.7 42.1 407 1-409 128-552 (563)
40 3lns_A Benzaldehyde dehydrogen 100.0 1.8E-85 6.1E-90 663.0 43.0 394 1-407 56-456 (457)
41 3ju8_A Succinylglutamic semial 100.0 2.9E-85 9.9E-90 666.5 41.5 398 1-408 70-471 (490)
42 4f9i_A Proline dehydrogenase/d 100.0 7.1E-85 2.4E-89 704.3 43.4 406 1-408 596-1010(1026)
43 2y53_A Aldehyde dehydrogenase 100.0 1.5E-83 5.3E-88 660.2 38.0 401 1-406 72-517 (534)
44 3haz_A Proline dehydrogenase; 100.0 3.1E-82 1.1E-86 682.3 41.3 401 1-408 578-987 (1001)
45 3v4c_A Aldehyde dehydrogenase 100.0 9.2E-80 3.2E-84 631.4 35.3 390 1-404 91-514 (528)
46 1ez0_A ALDH, aldehyde dehydrog 100.0 2.2E-79 7.4E-84 626.2 37.2 389 1-405 58-480 (510)
47 3k9d_A LMO1179 protein, aldehy 100.0 4.7E-75 1.6E-79 588.0 27.7 384 1-409 40-450 (464)
48 1vlu_A Gamma-glutamyl phosphat 100.0 1.3E-75 4.3E-80 591.1 17.5 368 1-408 42-440 (468)
49 2h5g_A Delta 1-pyrroline-5-car 100.0 2.8E-73 9.5E-78 573.3 24.3 358 1-408 57-435 (463)
50 4ghk_A Gamma-glutamyl phosphat 100.0 3.4E-72 1.2E-76 563.8 25.1 360 1-408 54-439 (444)
51 1o20_A Gamma-glutamyl phosphat 100.0 3.1E-72 1.1E-76 561.4 23.5 359 1-409 42-423 (427)
52 3my7_A Alcohol dehydrogenase/a 100.0 7.5E-71 2.6E-75 555.6 23.1 383 1-409 35-450 (452)
53 4gic_A HDH, histidinol dehydro 97.7 0.014 4.9E-07 56.3 24.0 262 60-404 118-399 (423)
54 1kae_A HDH, histidinol dehydro 97.6 0.031 1.1E-06 54.1 24.6 259 61-405 113-393 (434)
55 1s7i_A Hypothetical protein PA 65.4 24 0.00082 27.8 7.6 73 261-339 30-108 (124)
56 3v42_A Folliculin; tumor suppr 55.3 12 0.00042 32.9 4.5 65 89-161 21-85 (226)
57 2fiu_A Conserved hypothetical 55.0 29 0.00099 26.1 6.1 22 317-338 55-76 (99)
58 1b93_A Protein (methylglyoxal 54.2 26 0.0009 28.7 6.0 114 73-212 12-135 (152)
59 2yvq_A Carbamoyl-phosphate syn 41.5 35 0.0012 27.5 4.9 63 118-182 60-132 (143)
60 1b4b_A Arginine repressor; cor 34.6 56 0.0019 22.8 4.5 56 98-170 12-67 (71)
61 2zfz_A Arginine repressor; DNA 34.4 59 0.002 23.2 4.6 36 98-137 20-55 (79)
62 2xw6_A MGS, methylglyoxal synt 33.5 16 0.00055 29.4 1.5 77 93-180 25-110 (134)
63 1xxa_A ARGR, arginine represso 32.5 50 0.0017 23.6 4.0 38 98-138 14-51 (78)
64 1vmd_A MGS, methylglyoxal synt 31.6 33 0.0011 28.9 3.3 115 72-212 27-151 (178)
65 2ioj_A Hypothetical protein AF 29.7 34 0.0012 27.2 3.0 48 129-177 53-100 (139)
66 2i2c_A Probable inorganic poly 29.3 73 0.0025 28.6 5.5 88 102-207 5-94 (272)
67 3iwt_A 178AA long hypothetical 28.0 93 0.0032 25.7 5.6 50 112-161 40-92 (178)
68 3pzy_A MOG; ssgcid, seattle st 27.9 63 0.0022 26.6 4.4 50 112-162 27-78 (164)
69 2p5m_A Arginine repressor; alp 27.0 82 0.0028 22.7 4.4 56 98-170 24-79 (83)
70 3v4g_A Arginine repressor; vib 26.5 65 0.0022 27.1 4.2 40 96-138 114-153 (180)
71 2ec4_A FAS-associated factor 1 26.4 27 0.00094 29.3 1.9 49 311-359 25-77 (178)
72 3ufx_B Succinyl-COA synthetase 26.3 2.5E+02 0.0085 26.7 8.9 73 112-185 258-343 (397)
73 3u3x_A Oxidoreductase; structu 25.3 3.4E+02 0.012 25.0 9.7 89 142-247 80-170 (361)
74 3rfq_A Pterin-4-alpha-carbinol 24.9 71 0.0024 27.0 4.2 52 112-163 49-102 (185)
75 2bon_A Lipid kinase; DAG kinas 24.6 2.9E+02 0.0098 25.2 8.9 103 102-208 34-146 (332)
76 2v9v_A Selenocysteine-specific 24.4 75 0.0026 24.7 4.1 80 202-284 36-124 (135)
77 3mwd_B ATP-citrate synthase; A 23.4 3.6E+02 0.012 24.9 9.2 86 97-188 167-264 (334)
78 2qv7_A Diacylglycerol kinase D 23.1 3E+02 0.01 25.1 8.7 104 101-208 28-142 (337)
79 3lo3_A Uncharacterized conserv 21.5 2.4E+02 0.0082 20.5 7.5 23 316-338 53-75 (94)
80 1b4a_A Arginine repressor; hel 20.8 1.5E+02 0.0052 23.9 5.3 56 98-170 90-145 (149)
81 3jtp_A Adapter protein MECA 1; 20.6 1.3E+02 0.0043 22.4 4.5 29 317-346 7-36 (98)
No 1
>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=1.9e-96 Score=745.59 Aligned_cols=410 Identities=43% Similarity=0.743 Sum_probs=391.8
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccccCccccccccCCcEEEEEcC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.+++++.++++..+...+...+...+.+++|+|||++|+|
T Consensus 72 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P 151 (490)
T 2wme_A 72 LRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGA 151 (490)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEEETTEEEEEEEEECSEEEEECC
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhccccccCccccccCCcceeEEecceeEEEEecc
Confidence 57899999999999999999999999998755679999999999999998887776666666778899999999999999
Q ss_pred CCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCCH
Q 015031 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.++++.|+.||++|.|.||||+
T Consensus 152 wNfP~~~~~~~~a~ALaaGNtVVlKPse~tp~ta~~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~ 231 (490)
T 2wme_A 152 WNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGT 231 (490)
T ss_dssp SSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCH
T ss_pred ccCcchhhhhhHHHHHHcCCeEEEECCcCCHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECCh
Confidence 99999999999999999999999999999999999999999999999999999999888999999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHHh
Q 015031 161 DVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240 (414)
Q Consensus 161 ~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~ 240 (414)
.+|+++.+.++.+++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+|||++++|+|+++|+++++
T Consensus 232 ~~G~~i~~~~a~~~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~ 311 (490)
T 2wme_A 232 STGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQ 311 (490)
T ss_dssp HHHHHHHHHHHHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhccCCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHhccCCCcCCCceeeccchhHHHHHHHHHHHHHH
Confidence 99999987665578899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccC----CCCceeeeEEEEeCCCCCcccccccccc
Q 015031 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGP 316 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 316 (414)
++++|+|.|+++++||+++..+++++.++|++++.+|+++++||.... .+|+|++|||+.+++++|++++||+|||
T Consensus 312 ~l~vGdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGP 391 (490)
T 2wme_A 312 RIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGP 391 (490)
T ss_dssp TCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSS
T ss_pred hCcCCCCccccCccCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCC
Confidence 999999999999999999999999999999999999999999998653 3689999999999999999999999999
Q ss_pred eEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHH
Q 015031 317 VMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLH 396 (414)
Q Consensus 317 vl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~~ 396 (414)
|++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|.+|++
T Consensus 392 Vl~v~~~~~~deAi~~aN~~~yGL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PFGG~k~SG~Gre~G~~gl~ 471 (490)
T 2wme_A 392 VMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLA 471 (490)
T ss_dssp EEEEEEESCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBSHHHHHH
T ss_pred EEEEEEeCCHHHHHHHHhcCCCCCeEEEEcCCHHHHHHHHHHCCeeEEEEeCCCCCCCCCCcccccccccCchhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998777788999999999999999999999
Q ss_pred hhhcccEEEEeCCC
Q 015031 397 NYLQVKSVVTPIFN 410 (414)
Q Consensus 397 ~~~~~k~i~~~~~~ 410 (414)
+||+.|+|+++++.
T Consensus 472 ~ft~~K~v~i~~g~ 485 (490)
T 2wme_A 472 HYTRIKSVQVELGD 485 (490)
T ss_dssp TTEEEEEEEEECSC
T ss_pred HhhceeEEEEECCC
Confidence 99999999998763
No 2
>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*
Probab=100.00 E-value=3.2e-93 Score=727.58 Aligned_cols=412 Identities=40% Similarity=0.726 Sum_probs=391.5
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccc-cCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++.++++..+...+.. .+...+++++|+|||++|+
T Consensus 100 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~ 178 (520)
T 3ed6_A 100 VRAIADKIKEHREALARLETLDTGKTLEES-YADMDDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKEPVGVVTQIT 178 (520)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHTTSCCEEEECCSSTTEEEEEEEEECCEEEEEC
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCeecccCCCCCcccccccCccEEEEEC
Confidence 578999999999999999999999999976 46999999999999999887766544433 4556789999999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCC
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|++++++.++++.|+.||++|.|.||||
T Consensus 179 PwN~P~~~~~~~~apALaaGNtVVlKPs~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTGS 258 (520)
T 3ed6_A 179 PWNYPLLQASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGG 258 (520)
T ss_dssp CSSSHHHHHHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEEESC
T ss_pred CCccHHHHHHHHHHHHHHcCCEEEEEcCCcchHHHHHHHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999988889999999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHH
Q 015031 160 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239 (414)
Q Consensus 160 ~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~ 239 (414)
+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++
T Consensus 259 ~~vG~~i~~~aa-~~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~ 337 (520)
T 3ed6_A 259 IETGKHIMKNAA-NNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRV 337 (520)
T ss_dssp HHHHHHHHHHHH-TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhh-hcCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccCceEEEcHHHHHHHHHHHHHHH
Confidence 999999999988 8899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccC----CCCceeeeEEEEeCCCCCccccccccc
Q 015031 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFG 315 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fg 315 (414)
+++++|+|.|+++++||+++..+++++++++++++++|+++++||.... ..|+|++|||+.+++++|++++||+||
T Consensus 338 ~~l~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFG 417 (520)
T 3ed6_A 338 KKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFG 417 (520)
T ss_dssp TTCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCS
T ss_pred HhccCCCCccCCCcccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCCccccCceeC
Confidence 9999999999999999999999999999999999999999999998642 479999999999999999999999999
Q ss_pred ceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHH
Q 015031 316 PVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESL 395 (414)
Q Consensus 316 Pvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~ 395 (414)
||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++|+
T Consensus 418 PVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gre~G~~gl 497 (520)
T 3ed6_A 418 PVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPYFAQAPWGGYKQSGIGRELGKEGL 497 (520)
T ss_dssp SEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESCSCCCCTTSCBCCSGGGEESCBSHHHHH
T ss_pred cEEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHHCCcceEEECCCCCCCCCCCcCCcCcCcCCccchHHHH
Confidence 99999999999999999999999999999999999999999999999999999887778999999999999999999999
Q ss_pred HhhhcccEEEEeCC--CCCCC
Q 015031 396 HNYLQVKSVVTPIF--NSPWL 414 (414)
Q Consensus 396 ~~~~~~k~i~~~~~--~~~~~ 414 (414)
++||+.|+|+++.. ..+||
T Consensus 498 ~~~t~~k~v~~~~~~~~~~~~ 518 (520)
T 3ed6_A 498 EEYLVSKHILTNTNPQLVNWF 518 (520)
T ss_dssp HTTEEEEEEEEESSCCCCCCS
T ss_pred HHhhceEEEEEcCCCCccCcc
Confidence 99999999998875 35676
No 3
>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}
Probab=100.00 E-value=7.5e-93 Score=722.62 Aligned_cols=406 Identities=33% Similarity=0.612 Sum_probs=387.7
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccccCccccccc-cCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLR-EPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++. .|+..+++.+++++.++++..+...+...+...+.++ +|+|||++|+
T Consensus 77 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~ 155 (506)
T 3rh9_A 77 LEDIRDGLKENREEIGRILCMEHGKPWKEAQ-GEVDYAAGFFDYCAKHISALDSHTIPEKPKDCTWTVHYRPVGVTGLIV 155 (506)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGGCCEECSCCGGGCEEEEEEEECCSEEEEC
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCceeeEeecccceEEEEEC
Confidence 5789999999999999999999999999864 8999999999999999988776654443456678888 9999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCC
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++|++.+.++.|+.||++|.|.||||
T Consensus 156 PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS 235 (506)
T 3rh9_A 156 PWNFPIGMIAKKLSAALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGS 235 (506)
T ss_dssp CSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESC
T ss_pred CCchHHHHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999988889999999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHH
Q 015031 160 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239 (414)
Q Consensus 160 ~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~ 239 (414)
+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++
T Consensus 236 ~~vG~~i~~~aa-~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~ 314 (506)
T 3rh9_A 236 TEVGRKLIVDTA-EQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERV 314 (506)
T ss_dssp HHHHHHHHHHTT-TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhh-hcCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCCCCcccCcEEEEcHHHHHHHHHHHHHHH
Confidence 999999999987 8899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCC-CCceeeeEEEEeCCCCCcccccccccceE
Q 015031 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK-KGYYIEPTIFTNVTEDMLIAKNEIFGPVM 318 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~-~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl 318 (414)
+++++|+|.++++++||+++..+++++++++++++++|+++++||...+. .|+|++|||+.+++++|++++||+||||+
T Consensus 315 ~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl 394 (506)
T 3rh9_A 315 NKMTVGDGMNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLV 394 (506)
T ss_dssp HHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGGCCSSSCCCCEEEECCCTTSHHHHSCCCSSEE
T ss_pred HhccCCCCcccCCcccccCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCCCcEECCeEEccCCCCChhhcccccCcEE
Confidence 99999999999999999999999999999999999999999999986444 79999999999999999999999999999
Q ss_pred EEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhh
Q 015031 319 ALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNY 398 (414)
Q Consensus 319 ~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~~~~ 398 (414)
+|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++|
T Consensus 395 ~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~f 474 (506)
T 3rh9_A 395 PMALFRTEEEVIDAGNDTEFGLASYVFTADAERAQRVAAGLRFGHVGWNTGTGPTPEAPFGGMKASGIGREGGLEGLFEF 474 (506)
T ss_dssp EEEEECCHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCCSEEEESCCCCCCTTSCBCCSGGGEESCBSHHHHHTTT
T ss_pred EEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCccCcCcCcCCcCccHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999988788999999999999999999999999
Q ss_pred hcccEEEEeC
Q 015031 399 LQVKSVVTPI 408 (414)
Q Consensus 399 ~~~k~i~~~~ 408 (414)
|+.|+|+++.
T Consensus 475 t~~K~v~~~~ 484 (506)
T 3rh9_A 475 VEAQTVPRGF 484 (506)
T ss_dssp EEEEEEEEC-
T ss_pred cceEEEEEcC
Confidence 9999998765
No 4
>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}
Probab=100.00 E-value=8.6e-93 Score=725.63 Aligned_cols=412 Identities=41% Similarity=0.711 Sum_probs=392.6
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccc-cCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.++++++++++..+...+.. .+...+.+++|+|||++|+
T Consensus 91 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~ 169 (528)
T 3u4j_A 91 MFKVADLILARQEELALIESLEVGKPIAQA-RGEIGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVVGIIT 169 (528)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHTTCCEEEECCSCTTEEEEEEEEECCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCeeeccCCCCceeEEEeccceEEEEEC
Confidence 578999999999999999999999999986 78999999999999999887766555443 4566889999999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCC
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|++++++.++++.|+.||++|.|.||||
T Consensus 170 PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS 249 (528)
T 3u4j_A 170 PWNFPFIIASERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGS 249 (528)
T ss_dssp CSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESC
T ss_pred CCccHHHHHHHHHHHHHHcCCeEEEEcCCccHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCC
Confidence 99999999999999999999999999999999999999999999999999999999988889999999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHH
Q 015031 160 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239 (414)
Q Consensus 160 ~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~ 239 (414)
+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++
T Consensus 250 ~~~G~~i~~~aa-~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~ 328 (528)
T 3u4j_A 250 VRVGTKLGEIAA-RTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLLDIS 328 (528)
T ss_dssp HHHHHHHHHHHH-TTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-hcCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCCCEEEEechHHHHHHHHHHHHH
Confidence 999999999988 8899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCC-CCceeeeEEEEeCCCCCcccccccccceE
Q 015031 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK-KGYYIEPTIFTNVTEDMLIAKNEIFGPVM 318 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~-~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl 318 (414)
+++++|+|.++++++||+++..+++++.+++++++++|+++++||..... +|+|++|||+.+++++|++++||+||||+
T Consensus 329 ~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl 408 (528)
T 3u4j_A 329 RKVAFGDPLNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVL 408 (528)
T ss_dssp HHCCEECTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEECTTTSCEECCEEEESCCTTSHHHHSCCCSSEE
T ss_pred HhhcCCCCCCcCCccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCcEecceEEecCCCCCccccceeeccEE
Confidence 99999999999999999999999999999999999999999999987544 79999999999999999999999999999
Q ss_pred EEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhh
Q 015031 319 ALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNY 398 (414)
Q Consensus 319 ~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~~~~ 398 (414)
+|++|+|.||||+++|+++|||+++|||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++|
T Consensus 409 ~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~f 488 (528)
T 3u4j_A 409 STLTFKTADEAVALANATEFGLSASVWSTNLETALQTIRRIRAGRCWINSVIDGTPELPIGGYKKSGLGRELGRYGFDEY 488 (528)
T ss_dssp EEEEESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBSTTHHHHHT
T ss_pred EEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCcCCcCcCCCCcCchHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999887788999999999999999999999999
Q ss_pred hcccEEEEeCC-CCCCC
Q 015031 399 LQVKSVVTPIF-NSPWL 414 (414)
Q Consensus 399 ~~~k~i~~~~~-~~~~~ 414 (414)
|+.|+|+++.+ ..+||
T Consensus 489 t~~K~v~~~~~~~~~~~ 505 (528)
T 3u4j_A 489 SQFKGVHVTLGRPAPWF 505 (528)
T ss_dssp EEEEEEEEESSCCCCSC
T ss_pred hceEEEEEeCCCCCCcc
Confidence 99999998764 45665
No 5
>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}
Probab=100.00 E-value=6.4e-93 Score=720.05 Aligned_cols=405 Identities=27% Similarity=0.451 Sum_probs=387.4
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccccCccccccccCCcEEEEEcC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++. .|+..+++.+++++..+++..+...+...+...+.+++|+|||++|+|
T Consensus 54 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P 132 (484)
T 3ros_A 54 LHDIANALKEHEDELAKMMTLEMGKLLSESK-EEVELCVSICNYYADHGPEMLKPTKLNSDLGNAYYLKQSTGVIMACEP 132 (484)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHTSCEEECCTTSEEEEEEECCCEEEEECC
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCeeccCCCceeEEEecCCceEEEECC
Confidence 5789999999999999999999999999764 799999999999999988776664443355678899999999999999
Q ss_pred CCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCCH
Q 015031 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..|.+++.++|+|+|++|+++|++.+.++ |+.||++|.|+||||+
T Consensus 133 wN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~ 211 (484)
T 3ros_A 133 WNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAALTAKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSE 211 (484)
T ss_dssp SSSTTHHHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCH
T ss_pred CchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCH
Confidence 999999999999999999999999999999999999999999999999999999998777788 9999999999999999
Q ss_pred HHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHHh
Q 015031 161 DVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240 (414)
Q Consensus 161 ~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~ 240 (414)
.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++
T Consensus 212 ~~G~~i~~~aa-~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~ 290 (484)
T 3ros_A 212 RGGSAVAEAAG-KNLKKSTMELGGNDAFIVLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFS 290 (484)
T ss_dssp HHHHHHHHHHH-HTTCEEEEECCCCCEEEECTTCCHHHHHHHHTTTTTGGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHh-ccCCceEeecCCCCcceeCCCCCHHHHHHHHHHHHhcCCCCCccCCceEEEcHHHHHHHHHHHHHHHH
Confidence 99999999988 78999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccceEEE
Q 015031 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMAL 320 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v 320 (414)
++++|+|.++++++||+++..+++++++++++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|
T Consensus 291 ~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v 370 (484)
T 3ros_A 291 NLKAGDPLEADTTLPPMNSEKAKEKLEAQVKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEV 370 (484)
T ss_dssp TCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEEECCCCCCSSCCCCCEEEECCCTTSTTTTSCCCSSEEEE
T ss_pred hccCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCcCCCCCceeCCeEeecCCCCCcccccccccceEEE
Confidence 99999999999999999999999999999999999999999999875568999999999999999999999999999999
Q ss_pred eeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhc
Q 015031 321 MKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQ 400 (414)
Q Consensus 321 ~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~~~~~~ 400 (414)
++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++||+
T Consensus 371 ~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~ 450 (484)
T 3ros_A 371 FVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKVSAQIETGMTVINGRWITSGELPFGGIKKSGYGRELSGLGLMAFVN 450 (484)
T ss_dssp EEESSHHHHHHHHHSSSCCSCEEEECSCHHHHHHHHHHSCSSCCEETSCCCCCTTSCBCCSGGGEESCBSHHHHHTTTCE
T ss_pred EEcCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCccceEEECCCCCCCCCCCcCCcCcccCCcCchHHHHHHhhe
Confidence 99999999999999999999999999999999999999999999999987778899999999999999999999999999
Q ss_pred ccEEEEeC
Q 015031 401 VKSVVTPI 408 (414)
Q Consensus 401 ~k~i~~~~ 408 (414)
.|+|+++.
T Consensus 451 ~K~v~~~~ 458 (484)
T 3ros_A 451 EHLVIDVT 458 (484)
T ss_dssp EEEEEECG
T ss_pred eEEEEECC
Confidence 99998865
No 6
>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q
Probab=100.00 E-value=5.6e-93 Score=721.04 Aligned_cols=405 Identities=37% Similarity=0.629 Sum_probs=386.5
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccc-cCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++.++++..+...+.. .+...+.+++|+|||++|+
T Consensus 78 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~ 156 (484)
T 3ifg_A 78 LRRWFDLVIANSDDLALILTTEQGKPLAEA-KGEIAYAASFIEWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAIT 156 (484)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECSSEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHhhcCccccccCCCceeEEEecCCcEEEEEC
Confidence 578999999999999999999999999975 57999999999999998877665544432 4567789999999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCC
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|++++++.++++.|+.||++|.|.||||
T Consensus 157 PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS 236 (484)
T 3ifg_A 157 PWNFPAAMIARKVGPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGS 236 (484)
T ss_dssp CSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESC
T ss_pred CCcChHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999988889999999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHH
Q 015031 160 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239 (414)
Q Consensus 160 ~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~ 239 (414)
+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++
T Consensus 237 ~~~G~~i~~~aa-~~~k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~ 315 (484)
T 3ifg_A 237 TAVGRLLMAQSA-PTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAV 315 (484)
T ss_dssp HHHHHHHHHHTG-GGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhh-ccCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCCeEEEcHHHHHHHHHHHHHHH
Confidence 999999999987 8899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccceEE
Q 015031 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMA 319 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~ 319 (414)
+++++|+|.|+++++||+++..+++++++++++++++|+++++||.....+|+|++|||+.+++++|++++||+||||++
T Consensus 316 ~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~ 395 (484)
T 3ifg_A 316 SKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAP 395 (484)
T ss_dssp HTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEEEECTTSGGGTSCCCSSEEE
T ss_pred HhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCceEcCEEEecCCCCChhhCCeeeCcEEE
Confidence 99999999999999999999999999999999999999999999987555799999999999999999999999999999
Q ss_pred EeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhh
Q 015031 320 LMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYL 399 (414)
Q Consensus 320 v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~~~~~ 399 (414)
|++|+|.||||+++|+++|||+++|||+|.+.++++++++++|+|+||+.....+.+||||+|.||+|+++|++|+++||
T Consensus 396 v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~Gr~~g~~gl~~~~ 475 (484)
T 3ifg_A 396 LFRFASEEELVRLANDTEFGLAAYLYSRDIGRVWRVAEALEYGMVGINTGLISNEVAPFGGVKQSGLGREGSHYGIDDYV 475 (484)
T ss_dssp EEEECCHHHHHHHHHCSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCSSSCBCCEETTEECCBSTTTTTGGGE
T ss_pred EEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcCcCCCCchHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999997767789999999999999999999999999
Q ss_pred cccEEEEe
Q 015031 400 QVKSVVTP 407 (414)
Q Consensus 400 ~~k~i~~~ 407 (414)
+.|+|++.
T Consensus 476 ~~k~v~~~ 483 (484)
T 3ifg_A 476 VIKYLCVA 483 (484)
T ss_dssp EEEEEEEE
T ss_pred ceEEEEEe
Confidence 99999864
No 7
>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*
Probab=100.00 E-value=2.9e-92 Score=718.14 Aligned_cols=409 Identities=55% Similarity=0.958 Sum_probs=388.1
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccccCccccccccCCcEEEEEcC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.+++++.++++..+...+...+...+.+++|+|||++|+|
T Consensus 89 L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVV~~I~P 168 (501)
T 1bxs_A 89 LNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIP 168 (501)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECCSSSEEEEEEEEECCEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeeeccCCcceeEEecCCceEEEECC
Confidence 57899999999999999999999999997666899999999999999988776654443344556889999999999999
Q ss_pred CCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCCH
Q 015031 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.+.++.|+.||++|.|.||||+
T Consensus 169 wN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~ 248 (501)
T 1bxs_A 169 WNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGST 248 (501)
T ss_dssp SSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCH
T ss_pred CcchHHHHHHHHHHHHHcCCeeeccCCCccHHHHHHHHHHHHHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCH
Confidence 99999999999999999999999999999999999999999999999999999999888899999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHHh
Q 015031 161 DVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240 (414)
Q Consensus 161 ~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~ 240 (414)
.+|+.|.+.+++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++
T Consensus 249 ~~G~~i~~~aa~~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~ 328 (501)
T 1bxs_A 249 EVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAK 328 (501)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhhhccCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEchhHHHHHHHHHHHHHH
Confidence 99999999876578899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccceEEE
Q 015031 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMAL 320 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v 320 (414)
++++|+|.|+++++||+++..+++++++++++++++|+++++||+.....|+|++|||+.+++++|++++||+||||++|
T Consensus 329 ~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v 408 (501)
T 1bxs_A 329 KYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQI 408 (501)
T ss_dssp CCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEE
T ss_pred hcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEecCCCCCHHHhcccccceEEE
Confidence 99999999999999999999999999999999999999999999865446999999999999999999999999999999
Q ss_pred eeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhc
Q 015031 321 MKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQ 400 (414)
Q Consensus 321 ~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~~~~~~ 400 (414)
++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++|++
T Consensus 409 ~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~pfGG~k~SG~G~~~G~~~l~~f~~ 488 (501)
T 1bxs_A 409 MKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTE 488 (501)
T ss_dssp EEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCCCCTTSCBCCSGGGEESCBSHHHHHHTTEE
T ss_pred EEeCCHHHHHHHHhcCCCCeeEEEEcCCHHHHHHHHHhcCeeEEEECCCCCCCCCCCCCCcCcCCcCccchHHHHHHhhC
Confidence 99999999999999999999999999999999999999999999999987767889999999999999999999999999
Q ss_pred ccEEEEeCC
Q 015031 401 VKSVVTPIF 409 (414)
Q Consensus 401 ~k~i~~~~~ 409 (414)
.|+|+.++.
T Consensus 489 ~K~v~~~~~ 497 (501)
T 1bxs_A 489 VKTVTIKIS 497 (501)
T ss_dssp EEEEEEECS
T ss_pred eeEEEEccC
Confidence 999988754
No 8
>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*
Probab=100.00 E-value=1.9e-92 Score=721.40 Aligned_cols=407 Identities=43% Similarity=0.803 Sum_probs=384.6
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccc----cCccccccccCCcEEE
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS----RALQGYTLREPIGVVG 76 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~Gvv~ 76 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.+++++.++++..+..++.. .+...+.+++|+|||+
T Consensus 104 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~P~GVV~ 183 (517)
T 2o2p_A 104 LYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCG 183 (517)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHHHGGGCCEEEECCCCCTTSCEEEEEEEEECCEEE
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEecCCccEE
Confidence 578999999999999999999999999976448999999999999999887666544431 2225688999999999
Q ss_pred EEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEE
Q 015031 77 HIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSF 156 (414)
Q Consensus 77 ~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~ 156 (414)
+|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.++++.|+.||++|.|.|
T Consensus 184 ~I~PwN~P~~~~~~~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~F 263 (517)
T 2o2p_A 184 IVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGF 263 (517)
T ss_dssp EECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEE
T ss_pred EECCCcchHHHHHHHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999988889999999999999999
Q ss_pred eCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHH
Q 015031 157 TGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 236 (414)
Q Consensus 157 tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~ 236 (414)
|||+.+|+.|.+.++.++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+
T Consensus 264 TGS~~~G~~I~~~aa~~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~ 343 (517)
T 2o2p_A 264 TGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVV 343 (517)
T ss_dssp ESCHHHHHHHHHHHHHHTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHH
T ss_pred ECCHHHHHHHHHHhHHhcCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeHHHHHHHHHHHH
Confidence 99999999999987635789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccc
Q 015031 237 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGP 316 (414)
Q Consensus 237 ~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 316 (414)
++++++++|+|.|+++++||+++..+++++.+++++++++|+++++||......|+|++|||+.+++++|++++||+|||
T Consensus 344 ~~~~~~~vGdp~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGP 423 (517)
T 2o2p_A 344 EEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGP 423 (517)
T ss_dssp HHHTTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSS
T ss_pred HHHHhcCCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccCCCCCCeECCEEEeCCCCCChhhhcccccc
Confidence 99999999999999999999999999999999999999999999999986544699999999999999999999999999
Q ss_pred eEEEeeeCC--HHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHH
Q 015031 317 VMALMKFKT--VEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLES 394 (414)
Q Consensus 317 vl~v~~~~~--~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~ 394 (414)
|++|++|+| +||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|.++
T Consensus 424 Vl~v~~~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~~ 503 (517)
T 2o2p_A 424 IMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAA 503 (517)
T ss_dssp EEEEEEECTTCSHHHHHHHTCSSCCSCCEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCCGGGEECCBSHHHH
T ss_pred EEEEEEcCCCCHHHHHHHHhcCCCCceEEEeCCCHHHHHHHHHhcCEeEEEECCCCCCCCCCCcCCcCcCCcCccChHHH
Confidence 999999999 999999999999999999999999999999999999999999987777899999999999999999999
Q ss_pred HHhhhcccEEEEe
Q 015031 395 LHNYLQVKSVVTP 407 (414)
Q Consensus 395 ~~~~~~~k~i~~~ 407 (414)
+++|+++|+|+.+
T Consensus 504 l~~~~~~k~v~~~ 516 (517)
T 2o2p_A 504 LNEYLRIKTVTFE 516 (517)
T ss_dssp HHTTEEEEEEEEE
T ss_pred HHHhCCceEEEee
Confidence 9999999999875
No 9
>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*
Probab=100.00 E-value=2.5e-92 Score=720.02 Aligned_cols=412 Identities=45% Similarity=0.781 Sum_probs=388.5
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCce-ec--c-ccCccccccccCCcEEE
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV-LK--M-SRALQGYTLREPIGVVG 76 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~-~~--~-~~~~~~~~~~~P~Gvv~ 76 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++.++++..+.. .+ . ..+...+++++|+|||+
T Consensus 78 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~ 156 (503)
T 3iwj_A 78 LRAIAAKVTEKKPELAKLESIDCGKPLDEA-AWDIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVG 156 (503)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEE
Confidence 578999999999999999999999999975 5799999999999999887665432 11 1 13456788999999999
Q ss_pred EEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEE
Q 015031 77 HIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSF 156 (414)
Q Consensus 77 ~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~ 156 (414)
+|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.+.++.|+.||++|.|.|
T Consensus 157 ~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~F 236 (503)
T 3iwj_A 157 LITPWNYPMLMATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAF 236 (503)
T ss_dssp EECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEE
T ss_pred EECCCchHHHHHHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999988889999999999999999
Q ss_pred eCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHH
Q 015031 157 TGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 236 (414)
Q Consensus 157 tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~ 236 (414)
|||+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+
T Consensus 237 TGS~~~G~~i~~~aa-~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~ 315 (503)
T 3iwj_A 237 TGSSATGSKIMTAAA-QLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIV 315 (503)
T ss_dssp ESCHHHHHHHHHHHG-GGTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTTHHHHHHHHH
T ss_pred ECcHHHHHHHHHHHh-cCCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccCCeeEEcHHHHHHHHHHHH
Confidence 999999999999987 8899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccC--CCCceeeeEEEEeCCCCCcccccccc
Q 015031 237 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG--KKGYYIEPTIFTNVTEDMLIAKNEIF 314 (414)
Q Consensus 237 ~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~f 314 (414)
++++++++|+|.++++++||++++.+++++.+++++++++|+++++||.... ..|+|++|||+.+++++|++++||+|
T Consensus 316 ~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiF 395 (503)
T 3iwj_A 316 KWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVF 395 (503)
T ss_dssp HHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCCSSSCCCCEEEESCCTTSHHHHSCCC
T ss_pred HHHHhccCCCCCCCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCccCCCCceeCCeeeecCCCCchhhCceee
Confidence 9999999999999999999999999999999999999999999999998654 47999999999999999999999999
Q ss_pred cceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHH
Q 015031 315 GPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLES 394 (414)
Q Consensus 315 gPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~ 394 (414)
|||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|.+|
T Consensus 396 GPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~g 475 (503)
T 3iwj_A 396 GPVLCVKTFSTEEEAIDLANDTVYGLGAAVISNDLERCERVTKAFKAGIVWVNCSQPCFTQAPWGGVKRSGFGRELGEWG 475 (503)
T ss_dssp SSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSSCCCCTTSCBCCSGGGEECCBSHHHH
T ss_pred CceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcccCCCcchHHH
Confidence 99999999999999999999999999999999999999999999999999999987777899999999999999999999
Q ss_pred HHhhhcccEEEEeCCC--CCCC
Q 015031 395 LHNYLQVKSVVTPIFN--SPWL 414 (414)
Q Consensus 395 ~~~~~~~k~i~~~~~~--~~~~ 414 (414)
+++|++.|+|+++... ..||
T Consensus 476 ~~~f~~~k~v~~~~~~~~~~~~ 497 (503)
T 3iwj_A 476 LDNYLSVKQVTQYISEEPWGWY 497 (503)
T ss_dssp HHTTEEEEEEEEECCSSCCCCS
T ss_pred HHHhhCeEEEEEeCCCCccccc
Confidence 9999999999987653 3465
No 10
>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...
Probab=100.00 E-value=2.4e-92 Score=718.57 Aligned_cols=409 Identities=53% Similarity=0.888 Sum_probs=387.6
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccccCccccccccCCcEEEEEcC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.++++++++++..+..++...+...+.+++|+|||++|+|
T Consensus 88 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~P 167 (500)
T 1o04_A 88 LNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIP 167 (500)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECCSSSEEEEEEEEECCEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCcceecCCCceEEEEEecCCcEEEECC
Confidence 57899999999999999999999999997666899999999999999887776654443334556889999999999999
Q ss_pred CCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCCH
Q 015031 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+++|++.++++.|+.||++|.|.||||+
T Consensus 168 wN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~ 247 (500)
T 1o04_A 168 WNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGST 247 (500)
T ss_dssp SSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCH
T ss_pred CCchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCH
Confidence 99999999999999999999999999999999999999999999999999999999877899999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHHh
Q 015031 161 DVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240 (414)
Q Consensus 161 ~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~ 240 (414)
.+|+.|.+.+++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++
T Consensus 248 ~~G~~i~~~aa~~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~ 327 (500)
T 1o04_A 248 EIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAK 327 (500)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhhcCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCCCEEEEehhHHHHHHHHHHHHHH
Confidence 99999999876578999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccceEEE
Q 015031 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMAL 320 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v 320 (414)
++++|+|.|+++++||+++..+++++++++++++++|+++++||......|+|++|||+.+++++|++++||+||||++|
T Consensus 328 ~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v 407 (500)
T 1o04_A 328 SRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQI 407 (500)
T ss_dssp HCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEE
T ss_pred hCcCCCcccccCccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEeCCCCCChhhhCcccceEEEE
Confidence 99999999999999999999999999999999999999999999865346999999999999999999999999999999
Q ss_pred eeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhc
Q 015031 321 MKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQ 400 (414)
Q Consensus 321 ~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~~~~~~ 400 (414)
++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|.+|+++|++
T Consensus 408 ~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~f~~ 487 (500)
T 1o04_A 408 LKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTE 487 (500)
T ss_dssp EEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCSGGGEESCBSTGGGGGGGEE
T ss_pred EeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999987767889999999999999999999999999
Q ss_pred ccEEEEeCC
Q 015031 401 VKSVVTPIF 409 (414)
Q Consensus 401 ~k~i~~~~~ 409 (414)
.|+|+.++.
T Consensus 488 ~K~v~~~~~ 496 (500)
T 1o04_A 488 VKTVTVKVP 496 (500)
T ss_dssp EEEEEEECS
T ss_pred eEEEEEecC
Confidence 999988754
No 11
>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*
Probab=100.00 E-value=2.3e-92 Score=718.37 Aligned_cols=406 Identities=34% Similarity=0.629 Sum_probs=387.7
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceecc-ccCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.+++++.++++..+...+. ..+...+++++|+|||++|+
T Consensus 90 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~ 169 (498)
T 4f3x_A 90 LLKIADAIEKEADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAPAAGEYLPGHTSMIRRDPIGIVGSIA 169 (498)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECCEEEEEC
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCcccccceEEEcCcceEEEEC
Confidence 57899999999999999999999999998646899999999999999988766554432 24567889999999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCC
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|+++..+++++.++ +|+|++|++++++.+.++.|+.||++|.|.||||
T Consensus 170 PwN~P~~~~~~~~a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~ea-lP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS 248 (498)
T 4f3x_A 170 PWNYPLMMMAWKLAPAIGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGMVSITGD 248 (498)
T ss_dssp CSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHTT-SCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESC
T ss_pred CCchHHHHHHHHHHHHHHcCCeEEEECCcccHHHHHHHHHHHHHh-CCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECC
Confidence 999999999999999999999999999999999999999999999 9999999999988889999999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHH
Q 015031 160 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239 (414)
Q Consensus 160 ~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~ 239 (414)
+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++
T Consensus 249 ~~~G~~i~~~aa-~~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~ 327 (498)
T 4f3x_A 249 IATGKKVLAAAA-KTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAV 327 (498)
T ss_dssp HHHHHHHHHHHH-TTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCEEEEEEETTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-hhCCceeecCCCCCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCCceEEecHHHHHHHHHHHHHHH
Confidence 999999999988 8899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCC-eEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccceE
Q 015031 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGA-TLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVM 318 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga-~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl 318 (414)
+++++|+|.|+++++||+++..+++++++++++++++|+ ++++||...+.+|+|++|||+.+++++|++++||+||||+
T Consensus 328 ~~~~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl 407 (498)
T 4f3x_A 328 STIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVV 407 (498)
T ss_dssp TTCCCSCSSGGGCSSCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSBCCSSSCCBCCEEEESCCTTSHHHHSCCCSSEE
T ss_pred HhcccCCCccccCccccCcCHHHHHHHHHHHHHHHHCCCCEEEECCccCCCCCcEECCEEeecCCCCChhhCCceeCcEE
Confidence 999999999999999999999999999999999999999 9999998755689999999999999999999999999999
Q ss_pred EEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhh
Q 015031 319 ALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNY 398 (414)
Q Consensus 319 ~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~~~~ 398 (414)
+|++|+|.||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|.+|+++|
T Consensus 408 ~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~~l~~~ 487 (498)
T 4f3x_A 408 SVTRFTGKDDAVAWANDSDYGLASSVWTKDISKAMRAASRLQYGCTWINTHFMLTNEMPHGGIKQSGYGKDMSVYALEDY 487 (498)
T ss_dssp EEEEECTTSCHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCCTTSCBCCSGGGEECCBSHHHHHHHT
T ss_pred EEEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcCCcCccchHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999887778999999999999999999999999
Q ss_pred hcccEEEEeC
Q 015031 399 LQVKSVVTPI 408 (414)
Q Consensus 399 ~~~k~i~~~~ 408 (414)
|+.|+|+++.
T Consensus 488 t~~k~v~~~~ 497 (498)
T 4f3x_A 488 TAVRHIMINH 497 (498)
T ss_dssp EEEEEEEEEC
T ss_pred hceEEEEEeC
Confidence 9999998764
No 12
>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}
Probab=100.00 E-value=2.7e-92 Score=718.21 Aligned_cols=405 Identities=40% Similarity=0.682 Sum_probs=386.1
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccc-cCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++.++++..+...+.. .+...+.+++|+|||++|+
T Consensus 98 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~ 176 (504)
T 3ek1_A 98 LRKWFDLIIANADDIALIMTSEQGKPLAEA-RGEVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAIT 176 (504)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCcccccccccccceeeccCceEEEEEC
Confidence 578999999999999999999999999975 56999999999999999877665544332 3566788999999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCC
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|++++++.++++.|+.||++|.|.||||
T Consensus 177 PwN~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~t~~~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS 256 (504)
T 3ek1_A 177 PWNFPAAMITRKAAPALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGS 256 (504)
T ss_dssp CSSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESC
T ss_pred CCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999988889999999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHH
Q 015031 160 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239 (414)
Q Consensus 160 ~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~ 239 (414)
+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++
T Consensus 257 ~~~G~~i~~~aa-~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~ 335 (504)
T 3ek1_A 257 TEVGRLLMAQCA-PTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKV 335 (504)
T ss_dssp HHHHHHHHHHHG-GGTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhh-hhcCCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEehhHHHHHHHHHHHHH
Confidence 999999999987 7899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccceEE
Q 015031 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMA 319 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~ 319 (414)
+++++|+|.|+++++||+++..+++++++++++++++|+++++||.. .+|+|++|||+.+++++|++++||+||||++
T Consensus 336 ~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~--~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~ 413 (504)
T 3ek1_A 336 KELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKE--LGGLFFEPGILTGVTSDMLVAKEETFGPLAP 413 (504)
T ss_dssp HTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE--EETTEECCEEEEEECTTSGGGTSCCCSSEEE
T ss_pred hhcccCCCccccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcc--CCCceECCeEEecCCCcChhhcccccCcEEE
Confidence 99999999999999999999999999999999999999999999986 3689999999999999999999999999999
Q ss_pred EeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhh
Q 015031 320 LMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYL 399 (414)
Q Consensus 320 v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~~~~~ 399 (414)
|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||+.....+.+||||+|.||+|+++|++|+++|+
T Consensus 414 v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t 493 (504)
T 3ek1_A 414 LFAFDTEEEVIAQANDTIFGLAAYFYTENFSRAIRVSEALEYGMVGHNTGLISNEVAPFGGVKQSGLGREGSKYGIEEYL 493 (504)
T ss_dssp EEEECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHHHHSCCSEEEESCSCCCCSSSCBCCSGGGEESCBSTTTSGGGGE
T ss_pred EEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCcCcCcCCCCCcHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999998777789999999999999999999999999
Q ss_pred cccEEEEeCC
Q 015031 400 QVKSVVTPIF 409 (414)
Q Consensus 400 ~~k~i~~~~~ 409 (414)
+.|+|+++++
T Consensus 494 ~~K~v~~~~g 503 (504)
T 3ek1_A 494 ETKYICSAYK 503 (504)
T ss_dssp EEEEEEEECC
T ss_pred ceEEEEEecC
Confidence 9999988754
No 13
>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}
Probab=100.00 E-value=6.3e-92 Score=716.10 Aligned_cols=410 Identities=34% Similarity=0.589 Sum_probs=386.6
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceecc-ccCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++.++++..+...+. ..+...+..++|+|||++|+
T Consensus 78 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~ 156 (497)
T 3k2w_A 78 LRTFANKIRENKHILAPMLVAEQGKLLSVA-EMEVDVTATFIDYGCDNALTIEGDILPSDNQDEKIYIHKVPRGVVVGIT 156 (497)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHTTTTCCEEEEECSSTTEEEEEEEEECSEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCceEEEEC
Confidence 578999999999999999999999999976 4799999999999999988776654443 24566788999999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCC
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|++++++.++++.|+.||++|.|.||||
T Consensus 157 PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS 236 (497)
T 3k2w_A 157 AWNFPLALAGRKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGS 236 (497)
T ss_dssp CSSSHHHHHHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESC
T ss_pred CCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECc
Confidence 99999999999999999999999999999999999999999999999999999999988889999999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHH
Q 015031 160 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239 (414)
Q Consensus 160 ~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~ 239 (414)
+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++
T Consensus 237 ~~~G~~i~~~aa-~~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~ 315 (497)
T 3k2w_A 237 TVAGKQIYKTSA-EYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLV 315 (497)
T ss_dssp HHHHHHHHHHHT-TTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhh-hcCCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeHHHHHHHHHHHHHHH
Confidence 999999999987 8899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcc--cCC--CCceeeeEEEEeCCCCCccccccccc
Q 015031 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKP--IGK--KGYYIEPTIFTNVTEDMLIAKNEIFG 315 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~--~~~--~g~~~~Ptvl~~~~~~~~~~~~E~fg 315 (414)
+++++|+|.++++++||+++..+++++++++++++++|+++++||.. ... +|+|++|||+.+++++|++++||+||
T Consensus 316 ~~~~vg~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFG 395 (497)
T 3k2w_A 316 KGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFG 395 (497)
T ss_dssp HTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCS
T ss_pred HhccCCCCCCCCCccccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccC
Confidence 99999999999999999999999999999999999999999999973 222 68999999999999999999999999
Q ss_pred ceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHH
Q 015031 316 PVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESL 395 (414)
Q Consensus 316 Pvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~ 395 (414)
||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++|+
T Consensus 396 PVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~k~SG~G~~~G~~gl 475 (497)
T 3k2w_A 396 PILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQSFANINQAISDLEVGEVYINRGMGEQHQGFHNGWKQSGFGGEDGKFGL 475 (497)
T ss_dssp SEEEEEEESCHHHHHHHHTCSSEESEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCCTTSCBCCEETSEESCBSHHHHH
T ss_pred cEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEEcCCCCCCCCCCcCCcCCCcCCccchHHHH
Confidence 99999999999999999999999999999999999999999999999999999988788999999999999999999999
Q ss_pred HhhhcccEEEEeCCCCC
Q 015031 396 HNYLQVKSVVTPIFNSP 412 (414)
Q Consensus 396 ~~~~~~k~i~~~~~~~~ 412 (414)
++||++|+|+.++.+.+
T Consensus 476 ~~ft~~k~v~~~~~~~~ 492 (497)
T 3k2w_A 476 EQYLEKKTVYINEAEGH 492 (497)
T ss_dssp HTTEEEEEEEEECCC--
T ss_pred HHhcceEEEEEEccccc
Confidence 99999999999887643
No 14
>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=7.4e-92 Score=714.69 Aligned_cols=406 Identities=40% Similarity=0.682 Sum_probs=385.5
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccccCccccccccCCcEEEEEcC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.+++++.++++..+..++.+.+...+..++|+|||++|+|
T Consensus 76 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~P 155 (495)
T 3b4w_A 76 IAAAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETRTGSYGQSIVSREPVGVVGAIVA 155 (495)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHTCGGGSCSEEEEEETTEEEEEEEEECCEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCceEEEEEccCceEEEECC
Confidence 57899999999999999999999999997644899999999999999888877665443333456889999999999999
Q ss_pred CCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCCH
Q 015031 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++| +.+.++.|+.||++|.|.||||+
T Consensus 156 wN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g-~~~~g~~L~~~~~v~~I~FTGS~ 234 (495)
T 3b4w_A 156 WNVPLFLAVNKIAPALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSS 234 (495)
T ss_dssp SSSHHHHHHHHHHHHHHTTCEEEEECBTTSCHHHHHHHHHHHHTTCCTTSEEECCB-SHHHHHHHTTCTTCCEEEEESCH
T ss_pred CcchHHHHHHHHHHHHHcCCEEEEecCCccHHHHHHHHHHHHHhCCCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEeCCH
Confidence 99999999999999999999999999999999999999999999999999999999 88899999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHHh
Q 015031 161 DVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240 (414)
Q Consensus 161 ~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~ 240 (414)
.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++
T Consensus 235 ~~G~~i~~~aa-~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~ 313 (495)
T 3b4w_A 235 AVGREVGRRAA-EMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVT 313 (495)
T ss_dssp HHHHHHHHHHH-HTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhh-hcCCceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccHHHHHHHHHHHHHH
Confidence 99999999987 78999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccC--CCCceeeeEEEEeCCCCCcccccccccceE
Q 015031 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG--KKGYYIEPTIFTNVTEDMLIAKNEIFGPVM 318 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl 318 (414)
++++|+|.++++++||+++..+++++++++++++++|+++++||+... ..|+|++|||+.+++++|++++||+||||+
T Consensus 314 ~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl 393 (495)
T 3b4w_A 314 ALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVL 393 (495)
T ss_dssp HSCBCCTTCTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEE
T ss_pred hcCCCCCccCCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEecCcccccccCCceeCCEEecCCCCCChhhhcccccceE
Confidence 999999999999999999999999999999999999999999997643 369999999999999999999999999999
Q ss_pred EEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhh
Q 015031 319 ALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNY 398 (414)
Q Consensus 319 ~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~~~~ 398 (414)
+|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||+++ ..+.+||||+|.||+|+++|++|+++|
T Consensus 394 ~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~-~~~~~PfGG~k~SG~Gr~~G~~gl~~~ 472 (495)
T 3b4w_A 394 AIIPYDTEEDAIAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYGINWYA-FDPGSPFGGYKNSGIGRENGPEGVEHF 472 (495)
T ss_dssp EEEEESSHHHHHHHHHCSSCCSCCEEECSCHHHHHHHHHHSCCSCCEESSCC-CCTTSCBCCSGGGEESCBSHHHHHHTT
T ss_pred EEEecCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCEeEEEECCCC-CCCCCCCCCCCCCCcCccchHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999987 778999999999999999999999999
Q ss_pred hcccEEEEeCC
Q 015031 399 LQVKSVVTPIF 409 (414)
Q Consensus 399 ~~~k~i~~~~~ 409 (414)
+++|+|+.++.
T Consensus 473 ~~~k~v~~~~~ 483 (495)
T 3b4w_A 473 TQQKSVLLPMG 483 (495)
T ss_dssp EEEEEEECCTT
T ss_pred cceeEEEEccC
Confidence 99999988653
No 15
>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=3.6e-91 Score=712.85 Aligned_cols=406 Identities=42% Similarity=0.699 Sum_probs=385.4
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceecc-ccCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++. .|+..+++.++++++++++..+..++. ..+...+.+++|+|||++|+
T Consensus 92 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~ 170 (515)
T 2d4e_A 92 LLRIAELIEKHADELAVMECLDAGQVLRIVR-AQVARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPVGIIT 170 (515)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTTGGGTTCEEECCBTTTEEEEEEEEECCCEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecCCceEEEC
Confidence 5789999999999999999999999999765 899999999999999888776654443 23455688999999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCC
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.++++.|+.||++|.|.||||
T Consensus 171 PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS 250 (515)
T 2d4e_A 171 PWNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGE 250 (515)
T ss_dssp CSSSHHHHHHHHHHHHHHTTCCEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESC
T ss_pred CCCchhhhhhhhhhHHHHcCCeeeecCCCCcHHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCc
Confidence 99999999999999999999999999999999999999999999999999999999977788999999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHH
Q 015031 160 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239 (414)
Q Consensus 160 ~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~ 239 (414)
+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++
T Consensus 251 ~~~G~~I~~~aa-~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~ 329 (515)
T 2d4e_A 251 TETGKIVMRNAA-DHLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERA 329 (515)
T ss_dssp HHHHHHHHHHHG-GGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-hcCCceEecCCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhHHHHHHHHHHHHH
Confidence 999999999988 7899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccC--------CCCceeeeEEEEeCCCCCccccc
Q 015031 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG--------KKGYYIEPTIFTNVTEDMLIAKN 311 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~--------~~g~~~~Ptvl~~~~~~~~~~~~ 311 (414)
+++++|+|.++++++||+++..+++++++++++++++|+++++||+... ..|+|++|||+.+ +++|++++|
T Consensus 330 ~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~e 408 (515)
T 2d4e_A 330 RAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQE 408 (515)
T ss_dssp HHCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHS
T ss_pred hhcccCCcccccCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccccccccCCCceeCCEEEeC-CCCChhhhc
Confidence 9999999999999999999999999999999999999999999997643 2699999999999 999999999
Q ss_pred ccccceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcch
Q 015031 312 EIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCG 391 (414)
Q Consensus 312 E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g 391 (414)
|+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|
T Consensus 409 EiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G 488 (515)
T 2d4e_A 409 EIFGPVLVAIPFKDEEEALRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVYLNSHNVRHLPTPFGGVKGSGDRREGG 488 (515)
T ss_dssp CCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSSCCCCTTSCBCCSGGGBCSCBSH
T ss_pred cccCCceEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCcCCCCCCccch
Confidence 99999999999999999999999999999999999999999999999999999999987777899999999999999999
Q ss_pred HHHHHhhhcccEEEEeCC
Q 015031 392 LESLHNYLQVKSVVTPIF 409 (414)
Q Consensus 392 ~~~~~~~~~~k~i~~~~~ 409 (414)
++|+++|+++|+|+.++.
T Consensus 489 ~~gl~~~~~~K~v~~~~~ 506 (515)
T 2d4e_A 489 TYALDFYTDLKTIALPLR 506 (515)
T ss_dssp HHHHHHHEEEEEEEEESS
T ss_pred HHHHHHhCceeEEEEcCC
Confidence 999999999999988764
No 16
>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*
Probab=100.00 E-value=1.7e-91 Score=713.34 Aligned_cols=407 Identities=40% Similarity=0.730 Sum_probs=385.9
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccccCccccccccCCcEEEEEcC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++.++++..+...+...+...+..++|+|||++|+|
T Consensus 86 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~P 164 (503)
T 1a4s_A 86 MLEAARIIRERRDNIAKLEVINNGKTITEA-EYDIDAAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREPLGVCAGILA 164 (503)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHGGGCCEEEEECGGGCEEEEEEEECSEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCCcccCCCCceeEEEEecCceEEEECC
Confidence 578999999999999999999999999975 6799999999999999988766554443334466889999999999999
Q ss_pred CCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCCH
Q 015031 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++ ++++.|+.||++|.|.||||+
T Consensus 165 wN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~~aGlP~gvv~vv~g~~-~~g~~L~~~p~v~~V~FTGS~ 243 (503)
T 1a4s_A 165 WNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGA-ETGSLLCHHPNVAKVSFTGSV 243 (503)
T ss_dssp SSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSH-HHHHHHHHCTTCCEEEEESCH
T ss_pred CcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEecCc-hHHHHHHhCCCcCEEEEeCCH
Confidence 9999999999999999999999999999999999999999999999999999999977 899999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHHh
Q 015031 161 DVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240 (414)
Q Consensus 161 ~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~ 240 (414)
.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++
T Consensus 244 ~~G~~i~~~aa-~~~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~ 322 (503)
T 1a4s_A 244 PTGKKVMEMSA-KTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTK 322 (503)
T ss_dssp HHHHHHHHHHH-TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhh-hcCCceEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEehHHHHHHHHHHHHHHH
Confidence 99999999988 88999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCccc--C----CCCceeeeEEEEeCCCCCcccccccc
Q 015031 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI--G----KKGYYIEPTIFTNVTEDMLIAKNEIF 314 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~--~----~~g~~~~Ptvl~~~~~~~~~~~~E~f 314 (414)
++++|+|.++++++||+++..+++++++++++++++|+++++||+.. . ..|+|++|||+.+++++|++++||+|
T Consensus 323 ~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiF 402 (503)
T 1a4s_A 323 AIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIF 402 (503)
T ss_dssp TCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCC
T ss_pred hcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhcccc
Confidence 99999999999999999999999999999999999999999999764 2 36899999999999999999999999
Q ss_pred cceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHH
Q 015031 315 GPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLES 394 (414)
Q Consensus 315 gPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~ 394 (414)
|||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++|
T Consensus 403 GPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~G~~~G~~~ 482 (503)
T 1a4s_A 403 GPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQAT 482 (503)
T ss_dssp SSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCCCCTTSCBCCSGGGEECCBSTTGG
T ss_pred CceEEEEecCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHHCceeEEEECCCCCCCCCCCCCCcCCCCCCccchHHH
Confidence 99999999999999999999999999999999999999999999999999999987777889999999999999999999
Q ss_pred HHhhhcccEEEEeCCC
Q 015031 395 LHNYLQVKSVVTPIFN 410 (414)
Q Consensus 395 ~~~~~~~k~i~~~~~~ 410 (414)
+++|++.|+|+.++..
T Consensus 483 l~~f~~~k~v~~~~~~ 498 (503)
T 1a4s_A 483 VDYYSQLKTVIVEMGD 498 (503)
T ss_dssp GGGSEEEEEEEECCSC
T ss_pred HHHhcCceEEEEccCC
Confidence 9999999999887643
No 17
>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A
Probab=100.00 E-value=3.4e-91 Score=715.36 Aligned_cols=407 Identities=34% Similarity=0.560 Sum_probs=383.3
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHh-hhhhcCceeccccCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA-ADKIHGEVLKMSRALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++.+ .+...+...+...+...+..++|+|||++|+
T Consensus 102 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~ 180 (538)
T 3qan_A 102 LVKAAAIIRRRKHEFSAWLVHEAGKPWKEA-DADTAEAIDFLEYYARQMIELNRGKEILSRPGEQNRYFYTPMGVTVTIS 180 (538)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHTCCCHHHH-HHHHHHHHHHHHHHHHHHHHHHTCBCCCCCTTEEEEEEEEECCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCCeeecccCCcceeeecCCCcEEEEEC
Confidence 578999999999999999999999999976 45999999999999998 4555555444334667889999999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCC
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+++|++.++++.|+.||++|.|.||||
T Consensus 181 PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS 260 (538)
T 3qan_A 181 PWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGS 260 (538)
T ss_dssp CSTTTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESC
T ss_pred CCchHHHHHHHHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999988889999999999999999999
Q ss_pred HHHHHHHHHHHhhCC------CCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHH
Q 015031 160 TDVGRQVMQAAATSN------LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEK 233 (414)
Q Consensus 160 ~~~~~~i~~~~~~~~------~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~ 233 (414)
+.+|+.|.+.++ ++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|++
T Consensus 261 ~~~G~~i~~~aa-~~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~ 339 (538)
T 3qan_A 261 KDVGVRLYERAA-VVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLE 339 (538)
T ss_dssp HHHHHHHHHHHT-SCCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEETTTHHHHHH
T ss_pred HHHHHHHHHHhh-hccccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCccCceeEEehHHHHHHHH
Confidence 999999999987 66 89999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCccccccc
Q 015031 234 KLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEI 313 (414)
Q Consensus 234 ~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~ 313 (414)
+|+++++++++|+|.|+++++||+++..+++++++++++++++| ++++||......|+|++|||+.+++++|++++||+
T Consensus 340 ~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G-~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEi 418 (538)
T 3qan_A 340 KTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEI 418 (538)
T ss_dssp HHHHHHTTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EEEECCCEECSSSCEECCEEEESCCTTSHHHHSCC
T ss_pred HHHHHHHhccCCCCCCCCCCCcCccCHHHHHHHHHHHHHHHHCC-eEEeCCCcCCCCCceeCCeeeecCCCCChhhCCCc
Confidence 99999999999999999999999999999999999999999999 99999987544799999999999999999999999
Q ss_pred ccceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEEC-CcCCC-CCCCCccCCCCCCCC-Ccc
Q 015031 314 FGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWIN-CYFAF-DSDCPYGGYKMSGFG-RDC 390 (414)
Q Consensus 314 fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN-~~~~~-~~~~pfgG~~~sG~g-~~~ 390 (414)
||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+|| +.... .+.+||||+|.||+| +++
T Consensus 419 FGPVl~V~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~~PfGG~k~SG~G~~~~ 498 (538)
T 3qan_A 419 FGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAG 498 (538)
T ss_dssp CSSEEEEEEESSHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHCCCSEEEESSCSCCCCTTTSCBCCEETTBSCCCBT
T ss_pred CCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCCCcCCcCcCCCCcccc
Confidence 999999999999999999999999999999999999999999999999999999 55443 789999999999999 999
Q ss_pred hHHHHHhhhcccEEEEeCCC
Q 015031 391 GLESLHNYLQVKSVVTPIFN 410 (414)
Q Consensus 391 g~~~~~~~~~~k~i~~~~~~ 410 (414)
|++|+++|++.|+|+.+...
T Consensus 499 G~~gl~~ft~~k~v~~~~~~ 518 (538)
T 3qan_A 499 GPDYLALHMQAKTVSEMYAE 518 (538)
T ss_dssp STTTGGGGEEEEEEEEEC--
T ss_pred cHHHHHHhhCeEEEEEecCC
Confidence 99999999999999887643
No 18
>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}
Probab=100.00 E-value=6.6e-91 Score=706.91 Aligned_cols=405 Identities=39% Similarity=0.666 Sum_probs=385.7
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccc-cCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++..+.+..+...+.. .+...+.+++|+|||++|+
T Consensus 75 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~ 153 (481)
T 3jz4_A 75 LRNWFNLMMEHQDDLARLMTLEQGKPLAEA-KGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAIT 153 (481)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHGGGCCEEEECCSSTTEEEEEEEEECCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCccccccCCCceEEEEEcCccEEEEEC
Confidence 578999999999999999999999999975 57999999999999988876655544332 3556788999999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCC
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|+++..+.+++.++|+|+|++|++++++.+.++.|+.||++|.|.||||
T Consensus 154 PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS 233 (481)
T 3jz4_A 154 PWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGS 233 (481)
T ss_dssp CSSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESC
T ss_pred CCcchHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999988889999999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHH
Q 015031 160 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239 (414)
Q Consensus 160 ~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~ 239 (414)
+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|++++
T Consensus 234 ~~~g~~i~~~aa-~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~ 312 (481)
T 3jz4_A 234 TEIGRQLMEQCA-KDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAM 312 (481)
T ss_dssp HHHHHHHHHHHT-TTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-hcCCceEEecCCCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCCcEEEEeHHHHHHHHHHHHHHH
Confidence 999999999987 8899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccceEE
Q 015031 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMA 319 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~ 319 (414)
+++++|+|.++++++||+++..+++++++++++++++|+++++||...+.+|+|++|||+.+++++|++++||+||||++
T Consensus 313 ~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~ 392 (481)
T 3jz4_A 313 SKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAP 392 (481)
T ss_dssp TTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEESCCTTSGGGTSCCCSSEEE
T ss_pred HhccCCCCccCcCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeccEEEecCCCCcccccccccCceEE
Confidence 99999999999999999999999999999999999999999999987545789999999999999999999999999999
Q ss_pred EeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhh
Q 015031 320 LMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYL 399 (414)
Q Consensus 320 v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~~~~~ 399 (414)
|++|+|+||||+++|+++|||++||||+|.+.++++++++++|.|+||++....+.+||||+|.||+|+++|++|+++||
T Consensus 393 v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~g~~~~t 472 (481)
T 3jz4_A 393 LFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYL 472 (481)
T ss_dssp EEEECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCSSSCBCCSGGGEESCBSHHHHHHTTE
T ss_pred EEEECCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCcCCcccCcCCCCchHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999998877889999999999999999999999999
Q ss_pred cccEEEEe
Q 015031 400 QVKSVVTP 407 (414)
Q Consensus 400 ~~k~i~~~ 407 (414)
+.|+|++.
T Consensus 473 ~~k~v~~~ 480 (481)
T 3jz4_A 473 EIKYMCIG 480 (481)
T ss_dssp EEEEEEEE
T ss_pred ceeEEEEe
Confidence 99999875
No 19
>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*
Probab=100.00 E-value=4.3e-91 Score=710.10 Aligned_cols=401 Identities=33% Similarity=0.540 Sum_probs=380.0
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccc--c----CccccccccCCcE
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS--R----ALQGYTLREPIGV 74 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~P~Gv 74 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++.++++..+...+.. . +...+++++|+||
T Consensus 77 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~P~GV 155 (505)
T 3prl_A 77 LYAWADLLEERKEIIGELIMHEVAKPKKSA-IGEVSRTADIIRHTADEALRLNGETLKGDQFKGGSSKKIALVEREPLGV 155 (505)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHTCCHHHH-HHHHHHHHHHHHHHHHHHHTCCEEEEEGGGSTTTCSSEEEEEEEEECSE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCccccccccccccCCceeEEEEcCCcE
Confidence 578999999999999999999999999975 46999999999999999887665544332 1 3456888999999
Q ss_pred EEEEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeE
Q 015031 75 VGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKV 154 (414)
Q Consensus 75 v~~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v 154 (414)
|++|+|||||+...++++++||++||+||+|||+.+|.++..|.+++.++|+|+|++|+++|++.++++.|+.||++|.|
T Consensus 156 V~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I 235 (505)
T 3prl_A 156 VLAISPFNYPVNLAAAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMI 235 (505)
T ss_dssp EEEEECSSSTTHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEE
T ss_pred EEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999888899999999999999
Q ss_pred EEeCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHH
Q 015031 155 SFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 234 (414)
Q Consensus 155 ~~tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~ 234 (414)
.||||+.+|+.|.+.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++
T Consensus 236 ~FTGS~~~G~~i~~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~ 312 (505)
T 3prl_A 236 TFTGGTTTGERISEKAK---MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVAN 312 (505)
T ss_dssp EEESCHHHHHHHHHHCC---SSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHH
T ss_pred EEeCCHHHHHHHHHHcc---CCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccCceEEEeHHHHHHHHHH
Confidence 99999999999998864 899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccc
Q 015031 235 LVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIF 314 (414)
Q Consensus 235 l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~f 314 (414)
|+++++++++|+|. +++++||+++..+++++.+++++++++|+++++||.. .|+|++|||+.+++++|++++||+|
T Consensus 313 l~~~~~~~~~g~p~-~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~---~g~~~~PTvl~~v~~~~~i~~eEiF 388 (505)
T 3prl_A 313 IKELVEQLTVGSPE-DDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKR---QGNLLSPTLLDDVTPAMRVAWEEPF 388 (505)
T ss_dssp HHHHHHHCCBSCTT-TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSGGGTSCCC
T ss_pred HHHHHHhcccCCCC-CcCcCCcccCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCceeCCeEeecCCCCChhhcCCcc
Confidence 99999999999999 9999999999999999999999999999999999974 6899999999999999999999999
Q ss_pred cceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCC-CCCCCCccCCCCCCCCCcchHH
Q 015031 315 GPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA-FDSDCPYGGYKMSGFGRDCGLE 393 (414)
Q Consensus 315 gPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~-~~~~~pfgG~~~sG~g~~~g~~ 393 (414)
|||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+
T Consensus 389 GPVl~V~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~PFGG~k~SG~Gr~~g~~ 468 (505)
T 3prl_A 389 GPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTDRAINIGKHLEVGTVHINAKTERGPDHFPFLGVKKSGLGVQGIKP 468 (505)
T ss_dssp SSEEEEEEESSHHHHHHHHHTSSEESEEEEECSCHHHHHHHHHTSCSSEEEESSCCCSCSTTSCBCCEETTEESCBSHHH
T ss_pred CcEEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHHCCeeEEEEcCCCCCCCCCCCcCCcCcCCCCcCccHH
Confidence 999999999999999999999999999999999999999999999999999999876 4578999999999999999999
Q ss_pred HHHhhhcccEEEEeCC
Q 015031 394 SLHNYLQVKSVVTPIF 409 (414)
Q Consensus 394 ~~~~~~~~k~i~~~~~ 409 (414)
|+++|++.|+|+++..
T Consensus 469 ~~~~f~~~k~v~~~~~ 484 (505)
T 3prl_A 469 SLLSMTRERVTVLNLA 484 (505)
T ss_dssp HHHHTEEEEEEEEEC-
T ss_pred HHHHhhceEEEEEeCC
Confidence 9999999999988764
No 20
>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=1.2e-91 Score=715.46 Aligned_cols=403 Identities=40% Similarity=0.705 Sum_probs=383.6
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhh----hcCceeccccCccccccccCCcEEE
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADK----IHGEVLKMSRALQGYTLREPIGVVG 76 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~P~Gvv~ 76 (414)
|+++++.|++|+++|++++++|+|||..++ |+..+++.+++++.++++ ..+...+...+. .+.+++|+|||+
T Consensus 80 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea---ev~~~~~~~~~~a~~~~~~~~~~~g~~~~~~~~~-~~~~~~P~GVV~ 155 (517)
T 3r31_A 80 LKRAADIMRERNDALSTLETLDTGKPIQET---IVADPTSGADAFEFFGGIAPSALNGDYIPLGGDF-AYTKRVPLGVCV 155 (517)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHH---HHHSHHHHHHHHHHHHHHHHHHTCCCEEECSSSE-EEEEEEECSEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHH---HHHHHHHHHHHHHHHhhhccccccCcccccCCCc-ceEEEcCccEEE
Confidence 578999999999999999999999999975 999999999999998877 666555443455 889999999999
Q ss_pred EEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEE
Q 015031 77 HIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSF 156 (414)
Q Consensus 77 ~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~ 156 (414)
+|+|||||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++| +.+.++.|+.||++|.|.|
T Consensus 156 ~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~eaGlP~gvv~vv~g-~~~~g~~L~~~p~vd~I~F 234 (517)
T 3r31_A 156 GIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQG-DRDTGPLLVNHPDVAKVSL 234 (517)
T ss_dssp EECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHHTTCCTTSEEECCC-CTTHHHHHHTCTTEEEEEE
T ss_pred EECCCcchHHHHHHHHHHHHHcCCEEEEEcCcccHHHHHHHHHHHHHhCcCcccEEEEEC-CHHHHHHHHhCCCcCEEec
Confidence 999999999999999999999999999999999999999999999999999999999999 7789999999999999999
Q ss_pred eCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHH
Q 015031 157 TGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 236 (414)
Q Consensus 157 tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~ 236 (414)
|||+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+
T Consensus 235 TGS~~~G~~i~~~aa-~~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~ 313 (517)
T 3r31_A 235 TGSVPTGRKVAAAAA-GHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLK 313 (517)
T ss_dssp ESCHHHHHHHHHHHH-HTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGGHHHHHHHHH
T ss_pred cCCHHHHHHHHHHhh-cCCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHhcCCCceeccCceEEEeHHHHHHHHHHHH
Confidence 999999999999988 7899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccC---CCCceeeeEEEEeCCCCCccccccc
Q 015031 237 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG---KKGYYIEPTIFTNVTEDMLIAKNEI 313 (414)
Q Consensus 237 ~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~ 313 (414)
++++++++|+|.|+++++||++++.++++++++|++++++|+++++||...+ .+|+|++|||+.+++++|++++||+
T Consensus 314 ~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEi 393 (517)
T 3r31_A 314 RRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEI 393 (517)
T ss_dssp HHHHHCCBCCTTSTTCSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECCSCCSSCCSSSBCCCCEEEEEECTTSHHHHSCC
T ss_pred HHHHhccCCCCCCcCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEECCccCcccCCCCceECCEEEecCCCCCcccccee
Confidence 9999999999999999999999999999999999999999999999993121 3799999999999999999999999
Q ss_pred ccceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHH
Q 015031 314 FGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLE 393 (414)
Q Consensus 314 fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~ 393 (414)
||||++|++|+|.||||+++|+++|||++||||+|.+.++++++++++|+|+||+.....+.+||||+|.||+|+++|++
T Consensus 394 FGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~ 473 (517)
T 3r31_A 394 FGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLWINTYNLCPVEIPFGGSKQSGFGRENSAA 473 (517)
T ss_dssp SSSEEEEEEECCHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHSCCSEEEESSCCCCCTTSCBCCEETTEECCBSTGG
T ss_pred eccEEEEEEeCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHHCCcceEEECCCCCCCCCCCcCCcCcCCCCcCchHH
Confidence 99999999999999999999999999999999999999999999999999999998877889999999999999999999
Q ss_pred HHHhhhcccEEEEeCC
Q 015031 394 SLHNYLQVKSVVTPIF 409 (414)
Q Consensus 394 ~~~~~~~~k~i~~~~~ 409 (414)
|+++||+.|+|+++..
T Consensus 474 gl~~ft~~K~v~~~~~ 489 (517)
T 3r31_A 474 ALEHYSELKTVYVSTG 489 (517)
T ss_dssp GGGGSEEEEEEEECCC
T ss_pred HHHHhhceEEEEEcCC
Confidence 9999999999988753
No 21
>2ve5_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wme_A* 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=1.2e-90 Score=707.09 Aligned_cols=409 Identities=43% Similarity=0.744 Sum_probs=389.3
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccccCccccccccCCcEEEEEcC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.++++++++++..+...+...+...+.+++|+|||++|+|
T Consensus 72 L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p 151 (490)
T 2ve5_A 72 LRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGA 151 (490)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEEETTEEEEEEEEECSEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceeeEeeccccEEEEECC
Confidence 57899999999999999999999999998654599999999999999988776655554456678899999999999999
Q ss_pred CCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCCH
Q 015031 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..|++++.++|+|+|++|++++++.+.++.|+.||++|.|.||||+
T Consensus 152 wN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~p~vd~v~fTGS~ 231 (490)
T 2ve5_A 152 WNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGT 231 (490)
T ss_dssp SSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCH
T ss_pred CcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCChHHHHHHHhCCCcCEEEEeCCc
Confidence 99999999999999999999999999999999999999999999999999999999888899999999999999999999
Q ss_pred HHHHHHHHHH-hhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHH
Q 015031 161 DVGRQVMQAA-ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239 (414)
Q Consensus 161 ~~~~~i~~~~-~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~ 239 (414)
.+|+.|.+.+ + ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|++++
T Consensus 232 ~~g~~i~~~a~a-~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~ 310 (490)
T 2ve5_A 232 STGKKVMASASS-SSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERV 310 (490)
T ss_dssp HHHHHHHHHHHH-HHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHhchh-ccccceEEEcCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCccCCCeEEEcHHHHHHHHHHHHHHH
Confidence 9999999998 6 7899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccC----CCCceeeeEEEEeCCCCCccccccccc
Q 015031 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFG 315 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fg 315 (414)
+++++|+|.|+++++||+++..+++++.+++++++++|+++++||.... ..|+|++|||+.+++++|++++||+||
T Consensus 311 ~~~~~g~p~d~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFG 390 (490)
T 2ve5_A 311 QRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFG 390 (490)
T ss_dssp HTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCS
T ss_pred HhccCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceEccEEEecCCCCCccccceeeC
Confidence 9999999999999999999999999999999999999999999997632 368999999999999999999999999
Q ss_pred ceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHH
Q 015031 316 PVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESL 395 (414)
Q Consensus 316 Pvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~ 395 (414)
||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|.+++
T Consensus 391 Pvl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~pfGG~k~SG~G~~~G~~~~ 470 (490)
T 2ve5_A 391 PVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTL 470 (490)
T ss_dssp SEEEEEEESCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBSHHHHH
T ss_pred CeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCCCCCCCCcchHHHH
Confidence 99999999999999999999999999999999999999999999999999999887788999999999999999999999
Q ss_pred HhhhcccEEEEeCCC
Q 015031 396 HNYLQVKSVVTPIFN 410 (414)
Q Consensus 396 ~~~~~~k~i~~~~~~ 410 (414)
++|++.|+|+++.++
T Consensus 471 ~~f~~~k~v~~~~~~ 485 (490)
T 2ve5_A 471 AHYTRIKSVQVELGD 485 (490)
T ss_dssp HTTEEEEEEEEECSC
T ss_pred HHhheeEEEEEccCc
Confidence 999999999988653
No 22
>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A
Probab=100.00 E-value=7e-91 Score=706.97 Aligned_cols=404 Identities=37% Similarity=0.643 Sum_probs=382.3
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccc-cCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.++++++++++..++.++.. .+...+..++|+|||++|+
T Consensus 88 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~ 167 (495)
T 1wnd_A 88 LLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIA 167 (495)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEeeecCCeEEEEC
Confidence 578999999999999999999999999976444999999999999998877665543332 3445688999999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCC
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|.++..+++++.++ +|+|++|+++|++.+.++.|+.||++|.|.||||
T Consensus 168 PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~ea-lP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS 246 (495)
T 1wnd_A 168 PWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGS 246 (495)
T ss_dssp CSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESC
T ss_pred CCcchHHHHHHHHHHHHHcCCeeEeeCCCCChHHHHHHHHHHHHh-CCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECc
Confidence 999999999999999999999999999999999999999999999 9999999999987788999999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHH
Q 015031 160 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239 (414)
Q Consensus 160 ~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~ 239 (414)
+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++
T Consensus 247 ~~~G~~i~~~aa-~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~ 325 (495)
T 1wnd_A 247 IATGEHIISHTA-SSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAV 325 (495)
T ss_dssp HHHHHHHHHHHG-GGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-hcCCccccccCCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCCcEEEecchhHHHHHHHHHHHH
Confidence 999999999987 7899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcC-CeEeeCCc-ccCCCCceeeeEEEEeCCCCCcccccccccce
Q 015031 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREG-ATLLTGGK-PIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPV 317 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~g-a~v~~gg~-~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv 317 (414)
+++++|+|.|+++++||+++..+++++++++++++++| +++++||+ .. +.|+|++|||+.+++++|++++||+||||
T Consensus 326 ~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPV 404 (495)
T 1wnd_A 326 ATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRK-GNGYYYAPTLLAGALQDDAIVQKEVFGPV 404 (495)
T ss_dssp HTCCBCCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCS-SSSCCBCCEEEECCCTTSHHHHSCCCSSE
T ss_pred HhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcccC-CCCCeeCCEEEeCCCCCChhhhccccCce
Confidence 99999999999999999999999999999999999999 99999997 53 26999999999999999999999999999
Q ss_pred EEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHh
Q 015031 318 MALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHN 397 (414)
Q Consensus 318 l~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~~~ 397 (414)
++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|.+|+++
T Consensus 405 l~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ 484 (495)
T 1wnd_A 405 VSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLED 484 (495)
T ss_dssp EEEEEECCHHHHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCCCCTTSCBCCSGGGEECCBSHHHHHHT
T ss_pred EEEEEeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCCcCcCCccchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999987777899999999999999999999999
Q ss_pred hhcccEEEEe
Q 015031 398 YLQVKSVVTP 407 (414)
Q Consensus 398 ~~~~k~i~~~ 407 (414)
|+++|+|+.+
T Consensus 485 f~~~k~v~~~ 494 (495)
T 1wnd_A 485 YTVVRHVMVK 494 (495)
T ss_dssp TEEEEEEEEE
T ss_pred hhCeEEEEec
Confidence 9999999764
No 23
>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*
Probab=100.00 E-value=8.7e-91 Score=705.67 Aligned_cols=405 Identities=35% Similarity=0.592 Sum_probs=383.7
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccc-cCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.++++++++++..+...+.. .+...+..++|+|||++|+
T Consensus 72 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~ 150 (479)
T 2imp_A 72 LRKISAGIRERASEISALIVEEGGKIQQLA-EVEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGIL 150 (479)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHTTTTTCCCEEECCSSTTEEEEEEEEECSEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhhCCccccCCCCceeEEEEeccceEEEEC
Confidence 578999999999999999999999999975 57999999999999998877666543332 3446788999999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCC
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.++++.|+.||++|.|.||||
T Consensus 151 PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS 230 (479)
T 2imp_A 151 PWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGS 230 (479)
T ss_dssp CSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESC
T ss_pred CCchHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCC
Confidence 99999999999999999999999999999999999999999999999999999999977778999999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHH
Q 015031 160 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239 (414)
Q Consensus 160 ~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~ 239 (414)
+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|++++
T Consensus 231 ~~~g~~i~~~aa-~~~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~ 309 (479)
T 2imp_A 231 VSAGEKIMATAA-KNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAM 309 (479)
T ss_dssp HHHHHHHHHHHH-TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSCSEEEEEGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-ccCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCCcEEEEehhhHHHHHHHHHHHH
Confidence 999999999988 8899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccCCCCC-CCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccceE
Q 015031 240 KAWVVGDPFD-PAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVM 318 (414)
Q Consensus 240 ~~~~~g~~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl 318 (414)
+++++|+|.| +++++||++++.+++++++++++++++|+++++||+..+..|+|++|||+.+++++|++++||+||||+
T Consensus 310 ~~~~~g~p~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl 389 (479)
T 2imp_A 310 QAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVL 389 (479)
T ss_dssp HTCCBSCTTTCSSCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCCCSSSCCCCCEEEESCCTTSGGGGSCCCSSEE
T ss_pred HhcccCCccccCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCceECCEEEeCCCCCCHHHhCccCCceE
Confidence 9999999999 999999999999999999999999999999999997643468999999999999999999999999999
Q ss_pred EEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhh
Q 015031 319 ALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNY 398 (414)
Q Consensus 319 ~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~~~~ 398 (414)
+|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++|
T Consensus 390 ~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~ 469 (479)
T 2imp_A 390 PVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEY 469 (479)
T ss_dssp EEEEESSHHHHHHHHHCSSEESEEEEECCCHHHHHHHHHHCCSSEEEESSCCCCCTTSCBCCEETTEESCBSHHHHHHTT
T ss_pred EEEeeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCEeEEEECCCCCCCCCCCCCCCCCCCCCCCchHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999877678999999999999999999999999
Q ss_pred hcccEEEEe
Q 015031 399 LQVKSVVTP 407 (414)
Q Consensus 399 ~~~k~i~~~ 407 (414)
+++|+|+.+
T Consensus 470 ~~~k~v~~~ 478 (479)
T 2imp_A 470 LQTQVVYLQ 478 (479)
T ss_dssp EEEEEEEEE
T ss_pred cCeeEEEec
Confidence 999999763
No 24
>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}
Probab=100.00 E-value=1.5e-90 Score=704.78 Aligned_cols=402 Identities=35% Similarity=0.592 Sum_probs=377.0
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccccCcccccc-ccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTL-REPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.++++++..+........ ..+...+++ ++|+|||++|+
T Consensus 91 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~ 169 (497)
T 3i44_A 91 VEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEAL-IEGNEQAILHYDAIGVVGLIT 169 (497)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEES-STTCSSCEEEEEECCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhcccccccc-cCCceeEEEeecCceEEEEEC
Confidence 5789999999999999999999999999865489999999999998877654332211 124557788 99999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCC
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|++++++.++++.|+.||++|.|.||||
T Consensus 170 PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS 249 (497)
T 3i44_A 170 PWNWPMNQVTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGS 249 (497)
T ss_dssp CSSSHHHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESC
T ss_pred CCcchHHHHHHHHHHHHHcCCEEEEECCcccHHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCc
Confidence 99999999999999999999999999999999999999999999999999999999988889999999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHH
Q 015031 160 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239 (414)
Q Consensus 160 ~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~ 239 (414)
+.+|+.|.+.++ ++++|+++|+|||||+||++||| +.|++.+++++|.|+||.|++++|||||+++||+|+++|++++
T Consensus 250 ~~~G~~i~~~aa-~~~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~ 327 (497)
T 3i44_A 250 TRAGKDISKNAS-NTLKRVCLELGGKGANIIFADAD-IDALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIA 327 (497)
T ss_dssp HHHHHHHHHHHH-TTTCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-hcCCceeeccCCCCceEECCChh-HHHHHHHHHHHHhcCCCCcccCCEEEEcHHHHHHHHHHHHHHH
Confidence 999999999988 88999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred hccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCc-ccC--CCCceeeeEEEEeCCCCCcccccccccc
Q 015031 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK-PIG--KKGYYIEPTIFTNVTEDMLIAKNEIFGP 316 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~-~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 316 (414)
+++++|+|.|+++++||++++.+++++++++++++++|+++++||. ... ..|+|++|||+.+++++|++++||+|||
T Consensus 328 ~~~~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGP 407 (497)
T 3i44_A 328 EKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGP 407 (497)
T ss_dssp HHCCBCCTTSCSSCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSS
T ss_pred HhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCcCCCCcEECCEEEEeCCCCCHHHcCcccCc
Confidence 9999999999999999999999999999999999999999999994 322 2699999999999999999999999999
Q ss_pred eEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHH
Q 015031 317 VMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLH 396 (414)
Q Consensus 317 vl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~~ 396 (414)
|++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||. ....+.+||||+|.||+|+++|.+|++
T Consensus 408 Vl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~-~~~~~~~PfGG~k~SG~Gr~~G~~gl~ 486 (497)
T 3i44_A 408 VLSLLPFNTEDEAVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEVNG-HELPGGSYFGGVKFSGRAREGGLWGIK 486 (497)
T ss_dssp EEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEETT-CCCCTTCCBCCSGGGCCCCBSHHHHHH
T ss_pred eEEEEecCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcCeEEECC-CCCCCCCCcCCcCcCcCCccchHHHHH
Confidence 9999999999999999999999999999999999999999999999999995 445678999999999999999999999
Q ss_pred hhhcccEEEE
Q 015031 397 NYLQVKSVVT 406 (414)
Q Consensus 397 ~~~~~k~i~~ 406 (414)
+||+.|+|+.
T Consensus 487 ~~t~~K~v~~ 496 (497)
T 3i44_A 487 EFLDTKAISY 496 (497)
T ss_dssp TTEEEEEESC
T ss_pred HhcceeEEEe
Confidence 9999999753
No 25
>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=2.7e-90 Score=706.11 Aligned_cols=406 Identities=31% Similarity=0.468 Sum_probs=381.5
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceecc-ccCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++.+.+...+...+. ..+...+.+++|+|||++|+
T Consensus 92 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~ 170 (521)
T 4e4g_A 92 FMKFVQLLNDNMNELAEMLSREHGKTIDDA-KGDIVRGLEVCEFVIGIPHLQKSEFTEGAGPGIDMYSIRQPVGIGAGIT 170 (521)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCSCHHHH-HHHHHHHHHHHHHHHTHHHHTCEEEEEEEETTEEEEEEEEECCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCcEEEEEC
Confidence 578999999999999999999999999975 5799999999999998776665543322 24556788999999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCC
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++|+ .+.++.|+.||++|.|.||||
T Consensus 171 PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~t~~~l~~l~~eaGlP~gvv~vv~g~-~~~~~~L~~~p~vd~I~FTGS 249 (521)
T 4e4g_A 171 PFNFPGMIPMWMFAPAIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNGD-KGAVDAILTHPDIAAVSFVGS 249 (521)
T ss_dssp CSSCTTHHHHHHHHHHHHTTCEEEEECCTTSTHHHHHHHHHHHHTTCCTTSEEECCCC-HHHHHHHHTCTTCCEEEEESC
T ss_pred CCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCcCeEEEEeCC-hHHHHHHHhCCCcCEEEEECC
Confidence 9999999999999999999999999999999999999999999999999999999994 566799999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCc-cHHHHHHHHHHH
Q 015031 160 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEG-IYDEFEKKLVEK 238 (414)
Q Consensus 160 ~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~-~~~~f~~~l~~~ 238 (414)
+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+|||++ ++|+|+++|+++
T Consensus 250 ~~vG~~i~~~aa-~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~ 328 (521)
T 4e4g_A 250 TPIARYVYGTAA-MNGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLIDKLVPM 328 (521)
T ss_dssp HHHHHHHHHHHH-HTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-hcCCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccCeEEEEeCchHHHHHHHHHHHH
Confidence 999999999987 789999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred HhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCccc----CCCCceeeeEEEEeCCCCCcccccccc
Q 015031 239 AKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI----GKKGYYIEPTIFTNVTEDMLIAKNEIF 314 (414)
Q Consensus 239 ~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~~E~f 314 (414)
++++++|+|.++++++||+++..+++++++++++++++|+++++||... ..+|+|++|||+.+++++|++++||+|
T Consensus 329 ~~~~~vG~~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiF 408 (521)
T 4e4g_A 329 VESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIF 408 (521)
T ss_dssp HHTCCBCCTTCTTCSBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSCCC
T ss_pred HHhccCCCCCCccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCccc
Confidence 9999999999999999999999999999999999999999999999753 247999999999999999999999999
Q ss_pred cceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCC-CCCCCccCCCCCCCC--Ccch
Q 015031 315 GPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAF-DSDCPYGGYKMSGFG--RDCG 391 (414)
Q Consensus 315 gPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~-~~~~pfgG~~~sG~g--~~~g 391 (414)
|||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++... .+.+||||+|.||+| +++|
T Consensus 409 GPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~k~SG~G~~~~~G 488 (521)
T 4e4g_A 409 GPVLSVVRARNYEEALSLPMKHEYGNGVAIYTRDGDAARDFASRINIGMVGVNVPIPVPLAYHSFGGWKSSSFGDLNQHG 488 (521)
T ss_dssp SSEEEECCBSSHHHHHHHHHHSSEESEEEEECSBHHHHHHHHHHCCCSEEEESCSSCCCCTTSCBCCEETTEESSCCBSH
T ss_pred CcEEEEEEeCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCcCCcccCCCCCCccch
Confidence 9999999999999999999999999999999999999999999999999999998654 478999999999999 7899
Q ss_pred HHHHHhhhcccEEEEeCC
Q 015031 392 LESLHNYLQVKSVVTPIF 409 (414)
Q Consensus 392 ~~~~~~~~~~k~i~~~~~ 409 (414)
++|+++||+.|+|+.++.
T Consensus 489 ~~gl~~ft~~K~v~~~~~ 506 (521)
T 4e4g_A 489 TDSIKFWTRTKTITSRWP 506 (521)
T ss_dssp HHHHHHTEEEEEEEECCC
T ss_pred HHHHHHhheEEEEEEecC
Confidence 999999999999998764
No 26
>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*
Probab=100.00 E-value=3.8e-90 Score=700.11 Aligned_cols=399 Identities=32% Similarity=0.552 Sum_probs=378.6
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccccCccccccccCCcEEEEEcC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++.++++..+...+.+ +...+.+++|+|||++|+|
T Consensus 62 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~P~GVv~~I~P 139 (486)
T 3pqa_A 62 LMNIAKQIKEKKEELAKILAIDAGKPIKQA-RVEVERSIGTFKLAAFYVKEHRDEVIPSD-DRLIFTRREPVGIVGAITP 139 (486)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHHHCCEEEECCT-TEEEEEEEEECSEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCceecCC-CceeEEEEccccEEEEECC
Confidence 578999999999999999999999999975 57999999999999999887765544432 5578899999999999999
Q ss_pred CCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHc----CCCCCeEEEEcCCchhHHHHHHhCCCcCeEEE
Q 015031 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLA----GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSF 156 (414)
Q Consensus 81 ~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~a----glp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~ 156 (414)
||||+...++++++||++||+||+|||+.+|.++..+++++.++ |+|+|++|+++|++.++++.|+.||++|.|.|
T Consensus 140 wN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~f 219 (486)
T 3pqa_A 140 FNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISF 219 (486)
T ss_dssp SSSHHHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEE
T ss_pred CchHHHHHHHHHHHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEE
Confidence 99999999999999999999999999999999999999999999 99999999999988888999999999999999
Q ss_pred eCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHH
Q 015031 157 TGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 236 (414)
Q Consensus 157 tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~ 236 (414)
|||+.+|+.|.+.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+
T Consensus 220 TGS~~~g~~i~~~aa---~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~ 296 (486)
T 3pqa_A 220 TGSSKVGELITKKAG---FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFV 296 (486)
T ss_dssp ESCHHHHHHHHHHCC---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHH
T ss_pred ECChHHHHHHHHHcC---CCceeeccCCcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHHHHHHHHHHH
Confidence 999999999998864 89999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccc
Q 015031 237 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGP 316 (414)
Q Consensus 237 ~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 316 (414)
++++++++|+|.|+++++||+++..+++++++++++++++|+++++||.. .|+|++|||+ +++++|++++||+|||
T Consensus 297 ~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl-~v~~~~~i~~eEiFGP 372 (486)
T 3pqa_A 297 NKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKR---DKALFYPTIL-EVDRDNILCKTETFAP 372 (486)
T ss_dssp HHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEE-ECCTTSGGGTCCCCSS
T ss_pred HHHHhcccCCCCcCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCcEeccEEE-eCCCCChhhccccccc
Confidence 99999999999999999999999999999999999999999999999975 6899999999 9999999999999999
Q ss_pred eEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCC-CCCCCccCCCCCCCCCcchHHHH
Q 015031 317 VMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAF-DSDCPYGGYKMSGFGRDCGLESL 395 (414)
Q Consensus 317 vl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~-~~~~pfgG~~~sG~g~~~g~~~~ 395 (414)
|++|++|+| ||||+++|+++|||++||||+|.+.++++++++++|+|+||+++.+ .+.+||||+|.||+|+++|.+|+
T Consensus 373 Vl~v~~~~~-deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~Gr~~g~~gl 451 (486)
T 3pqa_A 373 VIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDINKSLKFAENLEFGGVVINDSSLFRQDNMPFGGVKKSGLGREGVKYAM 451 (486)
T ss_dssp EEEEEEECH-HHHHHHHTCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSCTTCCCTTSCBCCSGGGEESCBSHHHHH
T ss_pred EEEEEEEcH-HHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEEeCCCCcCCCCCCCCCcCcCcCCCCCcHHHH
Confidence 999999999 9999999999999999999999999999999999999999998653 35899999999999999999999
Q ss_pred HhhhcccEEEEeCC
Q 015031 396 HNYLQVKSVVTPIF 409 (414)
Q Consensus 396 ~~~~~~k~i~~~~~ 409 (414)
++|++.|+|+++..
T Consensus 452 ~~f~~~k~v~~~~~ 465 (486)
T 3pqa_A 452 EEMSNIKTIIISKA 465 (486)
T ss_dssp HHTEEEEEEEEEC-
T ss_pred HHhhceEEEEEcCC
Confidence 99999999988653
No 27
>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A
Probab=100.00 E-value=6.4e-90 Score=697.19 Aligned_cols=404 Identities=30% Similarity=0.478 Sum_probs=383.8
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccccCccccccccCCcEEEEEcC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++.++++..+.......+...+.+++|+|||++|+|
T Consensus 57 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P 135 (462)
T 3etf_A 57 LRDIGQALRAHAEEMAQCITREMGKPIKQA-RAEVTKSAALCDWYAEHGPAMLNPEPTLVENQQAVIEYRPLGVILAIMP 135 (462)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHHHHTSCEECSSGGGCEEEEEEECSEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHhHHHhcCCcccCCCCceeEEEeecCcEEEEECC
Confidence 578999999999999999999999999975 5799999999999999887766554222245567889999999999999
Q ss_pred CCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCCH
Q 015031 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++ +.+.+..|+.||++|.|.||||+
T Consensus 136 wN~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~l~~aglP~gv~~vv~g-~~~~~~~l~~~~~v~~v~fTGS~ 214 (462)
T 3etf_A 136 WNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQMIARILAEAGTPAGVYGWVNA-NNEGVSQMINDPRIAAVTVTGSV 214 (462)
T ss_dssp SSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHTTCCBTTEEECCC-CHHHHHHHHTSTTEEEEEEESCH
T ss_pred CchHHHHHHHHHHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcCeEEEEEC-CHHHHHHHhcCCCCCEEEEeCCc
Confidence 99999999999999999999999999999999999999999999999999999998 55778999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHHh
Q 015031 161 DVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240 (414)
Q Consensus 161 ~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~ 240 (414)
.+|+.|.+.++ ++.+|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++
T Consensus 215 ~~g~~i~~~aa-~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~ 293 (462)
T 3etf_A 215 RAGAAIGAQAG-AALKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAA 293 (462)
T ss_dssp HHHHHHHHHHH-HTTCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHh-ccCCceEEEcCCCCccEECCCCCHHHHHHHHHHHHHhcCCCcccCCcEEEEehhHHHHHHHHHHHHHH
Confidence 99999999988 78899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccceEEE
Q 015031 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMAL 320 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v 320 (414)
++++|+|.++++++||+++..+++++++++++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|
T Consensus 294 ~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v 373 (462)
T 3etf_A 294 ALKMGDPLVEENDLGPMARFDLRDELHQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAI 373 (462)
T ss_dssp HCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEE
T ss_pred hhcCCCCccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCcEEeeEEEECCCCCChhhcCceeCcEEEE
Confidence 99999999999999999999999999999999999999999999866568999999999999999999999999999999
Q ss_pred eeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhc
Q 015031 321 MKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQ 400 (414)
Q Consensus 321 ~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~~~~~~ 400 (414)
++|+|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|.+|+++||+
T Consensus 374 ~~~~~~deAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~k~SG~G~~~g~~g~~~~~~ 453 (462)
T 3etf_A 374 TVAKDAAHALALANDSEFGLSATIFTADDTLAAEMAARLECGGVFINGYSASDARVAFGGVKKSGFGRELSHFGLHEFCN 453 (462)
T ss_dssp EEESSHHHHHHHHHCSSCCSCEEEECSCHHHHHHHHHHCCSSEEEESSCCCCCTTSCBCCSGGGEECCBSHHHHHHTTEE
T ss_pred EEcCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcCCCCCCccchHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999988777899999999999999999999999999
Q ss_pred ccEEEEe
Q 015031 401 VKSVVTP 407 (414)
Q Consensus 401 ~k~i~~~ 407 (414)
.|+|+++
T Consensus 454 ~k~v~~~ 460 (462)
T 3etf_A 454 VQTVWKN 460 (462)
T ss_dssp EEEEEEC
T ss_pred eeEEEEe
Confidence 9999875
No 28
>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*
Probab=100.00 E-value=2.3e-90 Score=702.96 Aligned_cols=404 Identities=37% Similarity=0.632 Sum_probs=383.4
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceecc-ccCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.++++++++++..+...+. ..+...+.+++|+|||++|+
T Consensus 76 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~ 154 (487)
T 2w8n_A 76 LRKWYNLMIQNKDDLARIITAESGKPLKEA-HGEILYSAFFLEWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVIT 154 (487)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHGGGCCCEEECCSCTTCEEEEEEEECCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceEEEEEC
Confidence 578999999999999999999999999976 4699999999999999887766654443 23456788999999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEc---CCchhHHHHHHhCCCcCeEEE
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVP---GFGPTAGAAIASHMDIDKVSF 156 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~---~~~~~~~~~l~~~~~~~~v~~ 156 (414)
|||||+...++++++||++||+||+|||+.+|.++..|++++.++|+|+|++|+++ |++.+.++.|+.||++|.|.|
T Consensus 155 PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~f 234 (487)
T 2w8n_A 155 PWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISF 234 (487)
T ss_dssp CSSSTTHHHHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEE
T ss_pred CCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999 867788999999999999999
Q ss_pred eCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHH
Q 015031 157 TGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 236 (414)
Q Consensus 157 tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~ 236 (414)
|||+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+
T Consensus 235 TGS~~~g~~i~~~aa-~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~ 313 (487)
T 2w8n_A 235 TGSTTTGKILLHHAA-NSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFA 313 (487)
T ss_dssp EECHHHHHHHHHHHH-TTTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHHHHHHHHHHH
T ss_pred eCCHHHHHHHHHHHh-ccCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCCEEEEcccHHHHHHHHHH
Confidence 999999999999988 8899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhc-cccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCc-eeeeEEEEeCCCCCcccccccc
Q 015031 237 EKAKA-WVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGY-YIEPTIFTNVTEDMLIAKNEIF 314 (414)
Q Consensus 237 ~~~~~-~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~-~~~Ptvl~~~~~~~~~~~~E~f 314 (414)
+++++ +++|+|.++++++||+++..+++++++++++++++|+++++||+... .|+ |++|||+.+++++|++++||+|
T Consensus 314 ~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~~~-~g~~~~~Ptvl~~v~~~~~i~~eEiF 392 (487)
T 2w8n_A 314 EAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQ-LGKNFFEPTLLCNVTQDMLCTHEETF 392 (487)
T ss_dssp HHHHHHCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSBCT-TCTTCBCCEEEEEECGGGGTTCTTCC
T ss_pred HHHHhhcccCCcccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCC-CCCceECCEEEecCCCcchhhhcccc
Confidence 99999 99999999999999999999999999999999999999999998643 688 9999999999999999999999
Q ss_pred cceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHH
Q 015031 315 GPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLES 394 (414)
Q Consensus 315 gPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~ 394 (414)
|||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|.+|
T Consensus 393 GPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~~~SG~G~~~G~~~ 472 (487)
T 2w8n_A 393 GPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYG 472 (487)
T ss_dssp SSEEEEEEESCHHHHHHHHTCTTCCSEEEEECCCHHHHHHHHHHSCSSEEEESCSCCCCTTSCBCCSGGGEESCBSTTTG
T ss_pred cceEEEEEeCCHHHHHHHHhCCCCCceEEEeCCCHHHHHHHHHhCCeeeEEEcCCCCCCCCCCCCCCCCCCcCCCchHHH
Confidence 99999999999999999999999999999999999999999999999999999987777789999999999999999999
Q ss_pred HHhhhcccEEEEe
Q 015031 395 LHNYLQVKSVVTP 407 (414)
Q Consensus 395 ~~~~~~~k~i~~~ 407 (414)
+++|++.|+|+.+
T Consensus 473 l~~f~~~k~v~~~ 485 (487)
T 2w8n_A 473 IDEYLELKYVCYG 485 (487)
T ss_dssp GGGGEEEEEEEEC
T ss_pred HHHhcCccEEEEe
Confidence 9999999999764
No 29
>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}
Probab=100.00 E-value=1.1e-89 Score=701.22 Aligned_cols=403 Identities=34% Similarity=0.552 Sum_probs=366.2
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccc--cCccccccccCCcEEEEE
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS--RALQGYTLREPIGVVGHI 78 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~P~Gvv~~i 78 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++.++++..+ ..+.. .+...+.+++|+|||++|
T Consensus 78 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~Ev~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~P~GVv~~I 155 (508)
T 3r64_A 78 IYRAAELLEEHREEIVEWLIKESGSTRSKA-NLEITLAGNITKESASFPGRVHG-RISPSNTPGKENRVYRVAKGVVGVI 155 (508)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHTSCCCHHHH-HHHHHHHHHHHHHHTTSTTTCCE-EEECCSSTTEEEEEEEEECSEEEEE
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHhhhhcC-cccccCCCCceeEEEEecceEEEEE
Confidence 578999999999999999999999999976 46999999999999988876555 44322 346788999999999999
Q ss_pred cCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHH-HHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEe
Q 015031 79 IPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA-LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFT 157 (414)
Q Consensus 79 ~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~-~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~t 157 (414)
+|||||+...++++++||++||+||+|||+.+|.++ ..+.+++.++|+|+|++|+++|++.+.++.|+.||++|.|.||
T Consensus 156 ~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fT 235 (508)
T 3r64_A 156 SPWNFPLNLSIRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFT 235 (508)
T ss_dssp CCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCHHHHTHHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEE
T ss_pred CCCcchHHHHHHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEE
Confidence 999999999999999999999999999999999999 9999999999999999999999878899999999999999999
Q ss_pred CCHHHHHHHHHHHhhC--CCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHH
Q 015031 158 GSTDVGRQVMQAAATS--NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 235 (414)
Q Consensus 158 Gs~~~~~~i~~~~~~~--~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l 235 (414)
||+.+|+.|.+.++ + +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|
T Consensus 236 GS~~~g~~i~~~aa-~~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l 314 (508)
T 3r64_A 236 GSTPVGRRVGELAI-NGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKF 314 (508)
T ss_dssp SCHHHHHHHHHHHH-SSSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEEHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhh-cccCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEehhHHHHHHHHH
Confidence 99999999999987 6 78999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCccccccccc
Q 015031 236 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFG 315 (414)
Q Consensus 236 ~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fg 315 (414)
+++++++++|+|.++++++||++++.+++++++++++++++|+++++||.. .|+|+.|||+.+++++|++++||+||
T Consensus 315 ~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl~~v~~~~~i~~eEiFG 391 (508)
T 3r64_A 315 VEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI---EGRLVHPHVFSDVTSDMEIAREEIFG 391 (508)
T ss_dssp HHHHHTCCBSCTTSSSCCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCE---ETTEECCEEEEEECTTSGGGTSCCCS
T ss_pred HHHHHhccCCCCccCCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCC---CCcEEecEEEecCCCCChhhcccccC
Confidence 999999999999999999999999999999999999999999999999975 68999999999999999999999999
Q ss_pred ceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCC-CCCCCccCCCCCCCCCcchHHH
Q 015031 316 PVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAF-DSDCPYGGYKMSGFGRDCGLES 394 (414)
Q Consensus 316 Pvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~-~~~~pfgG~~~sG~g~~~g~~~ 394 (414)
||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++... .+.+||||+|.||+|+++|++|
T Consensus 392 PVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~~~SG~Gr~~G~~~ 471 (508)
T 3r64_A 392 PLISVLKADDEAHAAELANASDFGLSAAVWSKDIDRAAQFALQIDSGMVHINDLTVNDEPHVMFGGSKNSGLGRFNGDWA 471 (508)
T ss_dssp SEEEEEEESSHHHHHHHHTSSSCCSCEEEECSCHHHHHHHHTTSCSSEEEECC--------------------CCCHHHH
T ss_pred ceEEEEEeCCHHHHHHHHhCCCCCcEEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCcCCcCCCCCCcCccHHH
Confidence 999999999999999999999999999999999999999999999999999998754 6789999999999999999999
Q ss_pred HHhhhcccEEEEeCC
Q 015031 395 LHNYLQVKSVVTPIF 409 (414)
Q Consensus 395 ~~~~~~~k~i~~~~~ 409 (414)
+++||++|+|+++..
T Consensus 472 l~~ft~~k~v~~~~~ 486 (508)
T 3r64_A 472 IEEFTTDRWIGIKRS 486 (508)
T ss_dssp HHHTEEEEEEEEECC
T ss_pred HHHhhceEEEEEecc
Confidence 999999999988763
No 30
>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*
Probab=100.00 E-value=7.4e-90 Score=700.97 Aligned_cols=401 Identities=30% Similarity=0.479 Sum_probs=380.2
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccc---c--CccccccccCCcEE
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS---R--ALQGYTLREPIGVV 75 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~P~Gvv 75 (414)
|+++++.|++|+++|++++++|+|||..++. .|+..+++.+++++.++++..+..++.. . +...+.+++|+|||
T Consensus 83 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv 161 (501)
T 1uxt_A 83 LRKAADIIERNLDVFAEVLVMNAGKPKSAAV-GEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVV 161 (501)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHTGGGGGGGTCCEEEESTTSSTTTTEEEEEEEEECSEE
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccccCCCcCceEEEEEeeccEE
Confidence 5789999999999999999999999999764 7999999999999998887766554432 2 23568899999999
Q ss_pred EEEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEE
Q 015031 76 GHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVS 155 (414)
Q Consensus 76 ~~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~ 155 (414)
++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++|++ ++++.|+.||++|.|.
T Consensus 162 ~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~-~~g~~L~~~~~vd~I~ 240 (501)
T 1uxt_A 162 AAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPG-KEAEKIVADDRVAAVS 240 (501)
T ss_dssp EEECCTTSTTHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCH-HHHHHHHTCTTCCEEE
T ss_pred EEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHHhCCCcCeEEEEeCCc-HHHHHHHhCCCcCEEE
Confidence 999999999999999999999999999999999999999999999999999999999999977 8899999999999999
Q ss_pred EeCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHH
Q 015031 156 FTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 235 (414)
Q Consensus 156 ~tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l 235 (414)
||||+.+|+.|.+.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|
T Consensus 241 FTGS~~~G~~i~~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l 317 (501)
T 1uxt_A 241 FTGSTEVGERVVKVGG---VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEV 317 (501)
T ss_dssp EESCHHHHHHHHHHHC---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHH
T ss_pred EeCcHHHHHHHHHhcC---CCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEEEeccchHHHHHHHH
Confidence 9999999999999864 8999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCC-ceeeeEEEEeCC---CCCccccc
Q 015031 236 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKG-YYIEPTIFTNVT---EDMLIAKN 311 (414)
Q Consensus 236 ~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g-~~~~Ptvl~~~~---~~~~~~~~ 311 (414)
+++++++++|+|.|+++++||+++..+++++++++++++++|+++++||.. .| +|++|||+.+++ ++|++++|
T Consensus 318 ~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~---~g~~~~~Ptvl~~v~~~~~~~~i~~e 394 (501)
T 1uxt_A 318 AKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR---LGPTYVQPTFVEAPADRVKDMVLYKR 394 (501)
T ss_dssp HHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCB---CSSSCBCCEEEECCHHHHTTSHHHHS
T ss_pred HHHHHhccCCCccccCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCCceECCEEEeCCCCCCCcCHHHhC
Confidence 999999999999999999999999999999999999999999999999975 57 999999999999 99999999
Q ss_pred ccccceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCc-CCCCCCCCccCCCCCCCCCcc
Q 015031 312 EIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCY-FAFDSDCPYGGYKMSGFGRDC 390 (414)
Q Consensus 312 E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~-~~~~~~~pfgG~~~sG~g~~~ 390 (414)
|+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++ ....+.+||||+|.||+|+++
T Consensus 395 EiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~PfGG~k~SG~G~~~ 474 (501)
T 1uxt_A 395 EVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREG 474 (501)
T ss_dssp CCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCCCCTTSSSCBCCEETTEESCBS
T ss_pred cccCceEEEEeeCCHHHHHHHHhcCCCCcEEEEeCCCHHHHHHHHHhCCEeeEEEeCCCCCCCCCCCCCCcCCCCCCccC
Confidence 9999999999999999999999999999999999999999999999999999999998 556788999999999999999
Q ss_pred hHHHHHhhhcccEEEEeCC
Q 015031 391 GLESLHNYLQVKSVVTPIF 409 (414)
Q Consensus 391 g~~~~~~~~~~k~i~~~~~ 409 (414)
|.+|+++|+++|+|+.++.
T Consensus 475 G~~~l~~f~~~k~v~~~~~ 493 (501)
T 1uxt_A 475 IGYAVEAVTAYKTIVFNYK 493 (501)
T ss_dssp TTTTHHHHEEEEEEEEECT
T ss_pred hHHHHHHhCceeEEEEecC
Confidence 9999999999999988763
No 31
>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*
Probab=100.00 E-value=3e-89 Score=693.73 Aligned_cols=400 Identities=33% Similarity=0.505 Sum_probs=378.4
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccc-cC----ccc-cccccCCcE
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RA----LQG-YTLREPIGV 74 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~----~~~-~~~~~P~Gv 74 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++.++++..+...+.. .+ ... +..++|+||
T Consensus 68 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GV 146 (475)
T 1euh_A 68 LHKVADILMRDKEKIGAILSKEVAKGYKSA-VSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGL 146 (475)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHTCCHHHH-HHHHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSE
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCccccceeeEEEEeccce
Confidence 578999999999999999999999999975 67999999999999998877655543322 23 345 889999999
Q ss_pred EEEEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeE
Q 015031 75 VGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKV 154 (414)
Q Consensus 75 v~~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v 154 (414)
|++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++|++.+.++.|+.||++|.|
T Consensus 147 v~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V 226 (475)
T 1euh_A 147 VLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFI 226 (475)
T ss_dssp EEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEE
T ss_pred EEEECCCCchHHHHHHHHHHHHHcCCEEEEeCCCcChHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999777789999999999999
Q ss_pred EEeCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHH
Q 015031 155 SFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 234 (414)
Q Consensus 155 ~~tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~ 234 (414)
.||||+.+|+.|.+.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++
T Consensus 227 ~fTGS~~~g~~i~~~aa---~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~ 303 (475)
T 1euh_A 227 NFTGSTGIGERIGKMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEK 303 (475)
T ss_dssp EEESCHHHHHHHHHHTT---TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHH
T ss_pred EEECchHHHHHHHHhcC---CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEehhHHHHHHHH
Confidence 99999999999999864 899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccc
Q 015031 235 LVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIF 314 (414)
Q Consensus 235 l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~f 314 (414)
|+++++++++|+|.+ ++++||+++..+++++.+++++++++|+++++||.. .|+|++|||+.+++++|++++||+|
T Consensus 304 l~~~~~~~~~g~p~~-~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~---~g~~~~Ptvl~~v~~~~~~~~eE~F 379 (475)
T 1euh_A 304 IREKVLALTIGNPED-DADITPLIDTKSADYVEGLINDANDKGATALTEIKR---EGNLICPILFDKVTTDMRLAWEEPF 379 (475)
T ss_dssp HHHHHHTSCBSCGGG-TCSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE---ETTEECCEEEESCCTTSGGGTSCCC
T ss_pred HHHHHHhccCCCccc-cCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCceeCCEEEeCCCCcCHHHcCccc
Confidence 999999999999999 999999999999999999999999999999999975 5899999999999999999999999
Q ss_pred cceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECC-cCCCCCCCCccCCCCCCCCCcchHH
Q 015031 315 GPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINC-YFAFDSDCPYGGYKMSGFGRDCGLE 393 (414)
Q Consensus 315 gPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~-~~~~~~~~pfgG~~~sG~g~~~g~~ 393 (414)
|||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||+ +....+.+||||+|.||+|+++|.+
T Consensus 380 GPvl~v~~~~~~~eai~~an~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~pfGG~k~SG~G~~~g~~ 459 (475)
T 1euh_A 380 GPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKY 459 (475)
T ss_dssp SSEEEEEEESCHHHHHHHHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCCCSTTSCBCCEETTEESCBSHHH
T ss_pred cceEEEEecCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHhCCEeeEEECCCCCCCCCCCCcCCCCCCCcCCCccHH
Confidence 999999999999999999999999999999999999999999999999999999 6656788999999999999999999
Q ss_pred HHHhhhcccEEEEeC
Q 015031 394 SLHNYLQVKSVVTPI 408 (414)
Q Consensus 394 ~~~~~~~~k~i~~~~ 408 (414)
|+++|+++|+|+.++
T Consensus 460 ~~~~~~~~k~v~~~~ 474 (475)
T 1euh_A 460 SIEAMTTVKSVVFDI 474 (475)
T ss_dssp HHHHTEEEEEEEEEC
T ss_pred HHHHhCCeeEEEEec
Confidence 999999999998764
No 32
>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*
Probab=100.00 E-value=3.6e-89 Score=696.32 Aligned_cols=405 Identities=29% Similarity=0.487 Sum_probs=378.4
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccc-cCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++.++++..+...+.. .+...+.+++|+|||++|+
T Consensus 87 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~ 165 (500)
T 2j6l_A 87 VRQIGDALREKIQVLGSLVSLEMGKILVEG-VGEVQEYVDICDYAVGLSRMIGGPILPSERSGHALIEQWNPVGLVGIIT 165 (500)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHTCCCHHHH-HHHHHHHHHHHHHHHHHTTTCCCBEECCSSTTEEEEEEEEECSEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCccccccCCCceeEEEEecccEEEEEC
Confidence 578999999999999999999999999976 67999999999999988877655543322 2334567899999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHH----HcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEE
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK----LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVS 155 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~----~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~ 155 (414)
|||||+...++++++||++||+||+|||+.+|.++..+++++. ++|+|+|++|+++| +.++++.|+.||++|.|.
T Consensus 166 PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g-~~~~g~~L~~~~~vd~I~ 244 (500)
T 2j6l_A 166 AFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCG-GADIGTAMAKDERVNLLS 244 (500)
T ss_dssp CSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECC-SHHHHHHHHHCTTCSEEE
T ss_pred CCcchhhHHHHHHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeC-CHHHHHHHhcCCCcCEEE
Confidence 9999999999999999999999999999999999999888866 56999999999999 778899999999999999
Q ss_pred EeCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHH
Q 015031 156 FTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 235 (414)
Q Consensus 156 ~tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l 235 (414)
||||+.+|+.|.+.++ ++.+|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|
T Consensus 245 FTGS~~~g~~i~~~aa-~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l 323 (500)
T 2j6l_A 245 FTGSTQVGKQVGLMVQ-ERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRL 323 (500)
T ss_dssp EESCHHHHHHHHHHHH-HTTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETTTHHHHHHHH
T ss_pred EECCHHHHHHHHHHhc-cCCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHHHHHHHHHHH
Confidence 9999999999999987 789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCccccccccc
Q 015031 236 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFG 315 (414)
Q Consensus 236 ~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fg 315 (414)
+++++++++|+|.++++++||++++.+++++++++++++++|+++++||...+..|+|++|||+.+++++|++++||+||
T Consensus 324 ~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFG 403 (500)
T 2j6l_A 324 KKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFA 403 (500)
T ss_dssp HHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSSCBCCEEEESCCTTCHHHHSCCSS
T ss_pred HHHhhhcccCCcccCCCccccCCCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCCEEcCEEEECCCCcChhhcCcccC
Confidence 99999999999999999999999999999999999999999999999998644479999999999999999999999999
Q ss_pred ceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHH--hccceeEEEECCcCC-CCCCCCccCCCCCCCCCcchH
Q 015031 316 PVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVS--RSIRAGIIWINCYFA-FDSDCPYGGYKMSGFGRDCGL 392 (414)
Q Consensus 316 Pvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~--~~l~~g~v~vN~~~~-~~~~~pfgG~~~sG~g~~~g~ 392 (414)
||++|++|+|+||||+++|+++|||++||||+|.+.+++++ .++++|+|+||++.. ..+.+||||+|.||+|+++|.
T Consensus 404 PVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~V~vN~~~~~~~~~~PfGG~k~SG~G~~~g~ 483 (500)
T 2j6l_A 404 PILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGS 483 (500)
T ss_dssp SEEEEEEECCHHHHHHHHHTSSCCSEEEEECCCHHHHHHHHSTTSCCSSEEEESSCTTCCCTTSEECCSGGGCSCCEEST
T ss_pred ceEEEEeeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHhhccCCeeEEEECCCCccCCCCCCcCCcCCCCCCCcchH
Confidence 99999999999999999999999999999999999999999 779999999998754 346899999999999999999
Q ss_pred HHHHhhhcccEEEEeC
Q 015031 393 ESLHNYLQVKSVVTPI 408 (414)
Q Consensus 393 ~~~~~~~~~k~i~~~~ 408 (414)
+|+++|++.|+|+.++
T Consensus 484 ~~~~~f~~~k~v~~~~ 499 (500)
T 2j6l_A 484 DAWKQYMRRSTCTINY 499 (500)
T ss_dssp TGGGGGEEEEEEEEEC
T ss_pred HHHHHhhceEEEEEeC
Confidence 9999999999998753
No 33
>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=1.5e-89 Score=698.10 Aligned_cols=406 Identities=29% Similarity=0.467 Sum_probs=361.3
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccc--cCccccccccCCcEEEEE
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS--RALQGYTLREPIGVVGHI 78 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~P~Gvv~~i 78 (414)
|+++++.|++|+++|++++++|+|||..++. .|+..+++.+++++.++++..+...+.. .+...+.+++|+|||++|
T Consensus 72 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I 150 (485)
T 4dng_A 72 LQKARGYLHENRDDIIMMIARETGGTIIKST-IELEQTIAILDEAMTYTGELGGVKEVPSDIEGKTNKIYRLPLGVISSI 150 (485)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCSCEECCCCSSTTEEEEEEEEECCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhCCeeccccCCCCceEEEEEecceEEEEE
Confidence 5789999999999999999999999999864 5999999999999998877666544322 346678999999999999
Q ss_pred cCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHH-HHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEe
Q 015031 79 IPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA-LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFT 157 (414)
Q Consensus 79 ~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~-~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~t 157 (414)
+|||||+...++++++||++||+||+|||+.+|.++ ..|.+++.++|+|+|++|++++++.+.++.|+.||++|.|.||
T Consensus 151 ~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fT 230 (485)
T 4dng_A 151 SPFNFPMNLSMRSIAPAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFT 230 (485)
T ss_dssp CCSSSHHHHHHHHHHHHHHTTCEEEEECCGGGHHHHTHHHHHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEE
T ss_pred CCCccHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEE
Confidence 999999999999999999999999999999999999 9999999999999999999999887899999999999999999
Q ss_pred CCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHH
Q 015031 158 GSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVE 237 (414)
Q Consensus 158 Gs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~ 237 (414)
||+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|++
T Consensus 231 GS~~~g~~i~~~aa-~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~ 309 (485)
T 4dng_A 231 GSTAVGRHIGEIAG-RAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTA 309 (485)
T ss_dssp ECHHHHHHHHHHHH-HHTCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHTTCC----CCEEEEEEEHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHh-hhccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCccccCCEEEEeHHHHHHHHHHHHH
Confidence 99999999999987 78899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccce
Q 015031 238 KAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPV 317 (414)
Q Consensus 238 ~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv 317 (414)
+++++++|+|.|+++++||+++..+++++++++++++++|+++++||.. .|+|++|||+.+++++|++++||+||||
T Consensus 310 ~~~~~~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~---~g~~~~Ptvl~~v~~~~~i~~eE~FGPv 386 (485)
T 4dng_A 310 RVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKR---VGNVLTPYVFVGADNNSKIAQTELFAPI 386 (485)
T ss_dssp HHHHCCBSCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSHHHHCCCCSSE
T ss_pred HHHhccCCCCCcCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCC---CCcEECCEEEecCCCCChhhcCccccce
Confidence 9999999999999999999999999999999999999999999999975 6899999999999999999999999999
Q ss_pred EEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCC-CCCCCccCCCCCCCCCcchHHHHH
Q 015031 318 MALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAF-DSDCPYGGYKMSGFGRDCGLESLH 396 (414)
Q Consensus 318 l~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~-~~~~pfgG~~~sG~g~~~g~~~~~ 396 (414)
++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||++... .+.+||||+|.||+|+++|+++++
T Consensus 387 l~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~ 466 (485)
T 4dng_A 387 ATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLEKGEKFALQIDSGMTHVNDQSVNDSPNIAFGGNKASGVGRFGNPWVVE 466 (485)
T ss_dssp EEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHTTSCSSEEEESCC----------------------CHHHHH
T ss_pred EEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCcCCcCCCCCCccchHHHHH
Confidence 9999999999999999999999999999999999999999999999999998753 688999999999999999999999
Q ss_pred hhhcccEEEEeCCCC
Q 015031 397 NYLQVKSVVTPIFNS 411 (414)
Q Consensus 397 ~~~~~k~i~~~~~~~ 411 (414)
+||+.|+|++++...
T Consensus 467 ~~t~~k~v~~~~~~~ 481 (485)
T 4dng_A 467 EFTVTKWISIQKQYR 481 (485)
T ss_dssp HHEEEEEEEEEC---
T ss_pred HhhceEEEEEecCCc
Confidence 999999999887644
No 34
>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*
Probab=100.00 E-value=7.7e-89 Score=696.34 Aligned_cols=404 Identities=32% Similarity=0.541 Sum_probs=377.8
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceec--cccCccccccccCCcEEEEE
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK--MSRALQGYTLREPIGVVGHI 78 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~Gvv~~i 78 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++..+++..+...+ ...+...+..++|+|||++|
T Consensus 102 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I 180 (516)
T 1uzb_A 102 LLKAAALMRRRKRELEATLVYEVGKNWVEA-SADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVI 180 (516)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCCcccccCCCCceEEEEEeccceEEEE
Confidence 578999999999999999999999999976 479999999999999988877655322 12345568899999999999
Q ss_pred cCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeC
Q 015031 79 IPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTG 158 (414)
Q Consensus 79 ~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tG 158 (414)
+|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.++++.|+.||++|.|.|||
T Consensus 181 ~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTG 260 (516)
T 1uzb_A 181 APWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTG 260 (516)
T ss_dssp CCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEES
T ss_pred CCCccHHHHHHHHHHHHHHcCCeEEEeCCCCCHHHHHHHHHHHHHhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecC
Confidence 99999999999999999999999999999999999999999999999999999999997778899999999999999999
Q ss_pred CHHHHHHHHHHHhh-----CCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHH
Q 015031 159 STDVGRQVMQAAAT-----SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEK 233 (414)
Q Consensus 159 s~~~~~~i~~~~~~-----~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~ 233 (414)
|+.+|+.|.+.++. ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|++
T Consensus 261 S~~~G~~i~~~aa~~~~~~~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~ 340 (516)
T 1uzb_A 261 SLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLE 340 (516)
T ss_dssp CHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHH
T ss_pred CHHHHHHHHHHhhhccccccccceeEEecCCccceeECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEchHHHHHHHH
Confidence 99999999998762 5689999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCccccccc
Q 015031 234 KLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEI 313 (414)
Q Consensus 234 ~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~ 313 (414)
+|+++++++++|+| ++++++||++++.+++++++++++++++| ++++||......|+|++|||+.+++++|++++||+
T Consensus 341 ~l~~~~~~~~~G~p-~~~~~~Gpli~~~~~~~v~~~i~~a~~~G-~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEi 418 (516)
T 1uzb_A 341 RVLKRAERLSVGPA-EENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEI 418 (516)
T ss_dssp HHHHHHTTCCBSCG-GGCCSBCCCSCHHHHHHHHHHHHHHTTTS-EEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCC
T ss_pred HHHHHHHhccCCCC-ccccccCCCCCHHHHHHHHHHHHHHHHCC-CEEECCccCCCCCcEECCEEEECCCCCCHhhhccc
Confidence 99999999999999 99999999999999999999999999998 89999976334699999999999999999999999
Q ss_pred ccceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCC--CCCCCCccCCCCCCCCC-cc
Q 015031 314 FGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA--FDSDCPYGGYKMSGFGR-DC 390 (414)
Q Consensus 314 fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~--~~~~~pfgG~~~sG~g~-~~ 390 (414)
||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++.. ..+.+||||+|.||+|+ .+
T Consensus 419 FGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~ 498 (516)
T 1uzb_A 419 FGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTG 498 (516)
T ss_dssp CSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBT
T ss_pred cCceEEEEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCEeEEEEeCCCCCCCCCCCCCCCcCcCCCCCccc
Confidence 9999999999999999999999999999999999999999999999999999998654 35689999999999994 78
Q ss_pred hHHHHHhhhcccEEEEe
Q 015031 391 GLESLHNYLQVKSVVTP 407 (414)
Q Consensus 391 g~~~~~~~~~~k~i~~~ 407 (414)
|.+++++|+++|+|+.+
T Consensus 499 g~~~l~~f~~~k~v~~~ 515 (516)
T 1uzb_A 499 ALDYLRLFLEMKAVAER 515 (516)
T ss_dssp SHHHHHTTEEEEEEEEE
T ss_pred hHHHHHHcCCeeEEEec
Confidence 99999999999999764
No 35
>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=7.1e-89 Score=691.94 Aligned_cols=400 Identities=39% Similarity=0.629 Sum_probs=357.0
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccccCccccccccCCcEEEEEcC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.++++++.+++..+.. .....+.+++|+|||++|+|
T Consensus 73 L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~----~~~~~~~~~~P~GVv~~I~P 148 (478)
T 3ty7_A 73 LDKIVKEYENRKDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEE----RRGDDLVVKEAIGVSGLITP 148 (478)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEE----EETTEEEEEEECCCEEEECC
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhccc----CCccceEEecCceEEEEECC
Confidence 57899999999999999999999999998657899999999999999887765532 12457889999999999999
Q ss_pred CCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCCH
Q 015031 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|++++++.++++.|+.||++|.|.||||+
T Consensus 149 wN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~ 228 (478)
T 3ty7_A 149 WNFPTNQTSLKLAAAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSG 228 (478)
T ss_dssp SSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCH
T ss_pred CcchHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcH
Confidence 99999999999999999999999999999999999999999999999999999999888899999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHHh
Q 015031 161 DVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240 (414)
Q Consensus 161 ~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~ 240 (414)
.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++
T Consensus 229 ~~G~~i~~~aa-~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~ 307 (478)
T 3ty7_A 229 PTGSKIMEKAA-KDFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFS 307 (478)
T ss_dssp HHHCC--CSTT-TTTCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEETTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-hcCCceEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCCCeEEEcHHHHHHHHHHHHHHHH
Confidence 99999999887 88999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccC---CCCceeeeEEEEeCCCCCcccccccccce
Q 015031 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG---KKGYYIEPTIFTNVTEDMLIAKNEIFGPV 317 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv 317 (414)
++++|+|.++++++||+++..+++++++++++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||
T Consensus 308 ~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPv 387 (478)
T 3ty7_A 308 QVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPV 387 (478)
T ss_dssp TCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSE
T ss_pred hccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCccccCCCceeCCEEEecCCCCCcccCceeECce
Confidence 999999999999999999999999999999999999999999994321 37999999999999999999999999999
Q ss_pred EEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHh
Q 015031 318 MALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHN 397 (414)
Q Consensus 318 l~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~~~ 397 (414)
++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||+ ....+.+||||+|.||+|+++|++|+++
T Consensus 388 l~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~-~~~~~~~PfGG~k~SG~G~~~G~~~l~~ 466 (478)
T 3ty7_A 388 MSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINE-AGRKPDLPFGGYKQSGLGREWGDYGIEE 466 (478)
T ss_dssp EEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCSSEEEETT-CC----------------------CCGG
T ss_pred eEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECC-CCCCCCCCcCCcCcCcCCccchHHHHHH
Confidence 999999999999999999999999999999999999999999999999999 5566789999999999999999999999
Q ss_pred hhcccEEEE
Q 015031 398 YLQVKSVVT 406 (414)
Q Consensus 398 ~~~~k~i~~ 406 (414)
||+.|+|+.
T Consensus 467 ~t~~k~v~~ 475 (478)
T 3ty7_A 467 FLEVKSIAG 475 (478)
T ss_dssp GEEEEEEET
T ss_pred hcCeEEEEE
Confidence 999999873
No 36
>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=1.9e-88 Score=689.22 Aligned_cols=408 Identities=33% Similarity=0.519 Sum_probs=380.4
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceec-cccCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK-MSRALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++.+.+...++..+ ...+...+.+++|+|||++|+
T Consensus 71 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~ 149 (486)
T 1t90_A 71 LFNFQQLLSQHKEELAHLITIENGKNTKEA-LGEVGRGIENVEFAAGAPSLMMGDSLASIATDVEAANYRYPIGVVGGIA 149 (486)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHTTHHHHHCEEEEEEEETTEEEEEEEEECSEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEecccCEEEEEC
Confidence 578999999999999999999999999975 579999999999998766665554333 123446688999999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCC
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++| +.+.++.|+.||++|.|.||||
T Consensus 150 PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~I~fTGS 228 (486)
T 1t90_A 150 PFNFPMMVPCWMFPMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYG-AHDVVNGILEHPEIKAISFVGS 228 (486)
T ss_dssp CSSCTTHHHHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCC-SHHHHHHHHHCTTEEEEEEESC
T ss_pred CCchhHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCEEEEEEC-CHHHHHHHHhCCCCCEEEEeCC
Confidence 999999999999999999999999999999999999999999999999999999999 5678999999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcE-EEEeCccHHHHHHHHHHH
Q 015031 160 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSR-VYVQEGIYDEFEKKLVEK 238 (414)
Q Consensus 160 ~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~-v~V~~~~~~~f~~~l~~~ 238 (414)
+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++ +|||++ +|+|+++|+++
T Consensus 229 ~~~g~~i~~~aa-~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~ 306 (486)
T 1t90_A 229 KPVGEYVYKKGS-ENLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGI-ADEFMAKLQEK 306 (486)
T ss_dssp HHHHHHHHHHHH-HTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHH-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-ccCCcEEeccCCCCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccCCeeEEecCC-HHHHHHHHHHH
Confidence 999999999987 789999999999999999999999999999999999999999999999 999999 99999999999
Q ss_pred HhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccC-CCCceeeeEEEEeCCCCCcccccccccce
Q 015031 239 AKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG-KKGYYIEPTIFTNVTEDMLIAKNEIFGPV 317 (414)
Q Consensus 239 ~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv 317 (414)
++++++|+|.++++++||+++..+++++.+++++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||
T Consensus 307 ~~~~~vG~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPv 386 (486)
T 1t90_A 307 VADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPV 386 (486)
T ss_dssp HTTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECSSSSCCSSSSCCCCEEEESCCTTSHHHHSCCCSSE
T ss_pred HHhcccCCCCccCCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCCEECCEEEeCCCCCCHhhcCcccCce
Confidence 99999999999999999999999999999999999999999999997432 36899999999999999999999999999
Q ss_pred EEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCC-CCCCCCccCCCCCCCC--CcchHHH
Q 015031 318 MALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA-FDSDCPYGGYKMSGFG--RDCGLES 394 (414)
Q Consensus 318 l~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~-~~~~~pfgG~~~sG~g--~~~g~~~ 394 (414)
++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++.. ..+.+||||+|.||+| +++|++|
T Consensus 387 l~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~G~~~~~g~~g 466 (486)
T 1t90_A 387 LSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAIRYFRENIDAGMLGINLGVPAPMAFFPFSGWKSSFFGTLHANGKDS 466 (486)
T ss_dssp EEEEEESSHHHHHHHHHHSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCCTTSCCCCEETTEESSSCSSHHHH
T ss_pred EEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCcCCCCcCCCCCCccchHHH
Confidence 999999999999999999999999999999999999999999999999998644 3467999999999999 8999999
Q ss_pred HHhhhcccEEEEeCCCCC
Q 015031 395 LHNYLQVKSVVTPIFNSP 412 (414)
Q Consensus 395 ~~~~~~~k~i~~~~~~~~ 412 (414)
+++|++.|+|+.+++...
T Consensus 467 ~~~~~~~k~v~~~~~~~~ 484 (486)
T 1t90_A 467 VDFYTRKKVVTARYPAPD 484 (486)
T ss_dssp HHHTEEEEEEEEECCCCC
T ss_pred HHHhhceEEEEEecCCCC
Confidence 999999999998875543
No 37
>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*
Probab=100.00 E-value=3.6e-87 Score=675.98 Aligned_cols=397 Identities=26% Similarity=0.402 Sum_probs=366.0
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCce----eccccCccccccccCCcEEE
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV----LKMSRALQGYTLREPIGVVG 76 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~----~~~~~~~~~~~~~~P~Gvv~ 76 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.++++++...+..... .....+...+++++|+|||+
T Consensus 46 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~ 125 (469)
T 3sza_A 46 LEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMIQKLPEWAADEPVEKTPQTQQDELYIHSEPLGVVL 125 (469)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHHHHHHHHHSCEECCCCGGGTTSEEEEEEEECSEEE
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCccccCCCccceeeccCCCEEE
Confidence 57899999999999999999999999998766799999998888876654432211 11122446788999999999
Q ss_pred EEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEE
Q 015031 77 HIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSF 156 (414)
Q Consensus 77 ~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~ 156 (414)
+|+|||||+...++++++||++||+||+|||+.+|.++..+++++.++ +|+|++|+++|+ .+.+..|+.| ++|.|.|
T Consensus 126 ~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~a-lP~gvv~vv~g~-~~~~~~ll~~-~vd~I~F 202 (469)
T 3sza_A 126 VIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQY-LDKDLYPVINGG-VPETTELLKE-RFDHILY 202 (469)
T ss_dssp EECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHH-SCTTTSCBCCCS-HHHHHHHTTS-CCSEEEE
T ss_pred EECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHh-CCcceEEEEECC-HHHHHHHHhc-CCCEEEE
Confidence 999999999999999999999999999999999999999999999999 999999999994 4556677777 7999999
Q ss_pred eCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHH
Q 015031 157 TGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 236 (414)
Q Consensus 157 tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~ 236 (414)
|||+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+
T Consensus 203 TGS~~vG~~i~~~aa-~~lkpv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~ 281 (469)
T 3sza_A 203 TGSTGVGKIIMTAAA-KHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLK 281 (469)
T ss_dssp ESCHHHHHHHHHHHH-TTTCCEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSCCEEEECGGGHHHHHHHHH
T ss_pred ECCHHHHHHHHHHHh-hccCceEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEehhHHHHHHHHHH
Confidence 999999999999988 8899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccc
Q 015031 237 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGP 316 (414)
Q Consensus 237 ~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 316 (414)
++++++ +|+|.++++++||+++..+++++++++ +|+++++||... .+|+|++|||+.+++++|++++||+|||
T Consensus 282 ~~~~~~-~g~~~~~~~~~gpli~~~~~~rv~~~i-----~ga~v~~GG~~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGP 354 (469)
T 3sza_A 282 KSLKEF-YGEDAKKSRDYGRIISARHFQRVMGLI-----EGQKVAYGGTGD-AATRYIAPTILTDVDPQSPVMQEEIFGP 354 (469)
T ss_dssp HHHHHH-HCSCGGGCTTCCCCSCHHHHHHHHHHH-----TTSEEEECCCEE-TTTTEECCEEEESCCTTSGGGTSCCCSS
T ss_pred HHHHHh-cCCCCcccCcccccCCHHHHHHHHHHH-----cCCEEEeCCccC-CCCceeCCeeecCCCCcchhhhccccCC
Confidence 999988 599999999999999999999999998 589999999875 3799999999999999999999999999
Q ss_pred eEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCC--CCCCCCccCCCCCCCCCcchHHH
Q 015031 317 VMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA--FDSDCPYGGYKMSGFGRDCGLES 394 (414)
Q Consensus 317 vl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~--~~~~~pfgG~~~sG~g~~~g~~~ 394 (414)
|++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|.|+||++.. ..+.+||||+|.||+|+++|.+|
T Consensus 355 Vl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~~G~V~vN~~~~~~~~~~~PfGG~k~SG~Gr~~G~~g 434 (469)
T 3sza_A 355 VLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAANDVIVHITLHSLPFGGVGNSGMGSYHGKKS 434 (469)
T ss_dssp EEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHHHHHHCCCSEEEESCSSGGGSCTTSCBCCCGGGEECCBSTHHH
T ss_pred eEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHHHHHhCCcceEEEeCCCCCCCCCCCCcCCccccccCccchHHH
Confidence 9999999999999999999999999999999999999999999999999999863 46889999999999999999999
Q ss_pred HHhhhcccEEEEeC
Q 015031 395 LHNYLQVKSVVTPI 408 (414)
Q Consensus 395 ~~~~~~~k~i~~~~ 408 (414)
+++||+.|+|+.+.
T Consensus 435 ~~~ft~~K~v~~~~ 448 (469)
T 3sza_A 435 FETFSHRRSCLVRP 448 (469)
T ss_dssp HHHTEEEEEEEECC
T ss_pred HHHhhCeeEEEECC
Confidence 99999999998753
No 38
>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}
Probab=100.00 E-value=1.6e-87 Score=680.93 Aligned_cols=408 Identities=31% Similarity=0.493 Sum_probs=377.1
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceec-c-ccCccccccccCCcEEEEE
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK-M-SRALQGYTLREPIGVVGHI 78 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~P~Gvv~~i 78 (414)
|+++++.|++|+++|++++++|+||+..+ ..|+...++.+++++..+.+....... . ..+......++|+|||++|
T Consensus 56 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~--~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I 133 (474)
T 4h7n_A 56 LQQWKQAILSRREQLTEALVNDTGRLSIT--VLEIDSFLASIDRWCGLAPELLQTSAKNTSIPFIALQQSLVPYPLVGVI 133 (474)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHHHSCSHHH--HHHHHHHHHHHHHHHHHHHHHHCCEEEECSSTTEEEEEEEEECSEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCcHHH--HHHHHHHHHHHHHHHhhhhhcccccccCCCCCCccceEEEEeccEEEEE
Confidence 57899999999999999999999998653 469999999999998877665443222 1 1344556778899999999
Q ss_pred cCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeC
Q 015031 79 IPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTG 158 (414)
Q Consensus 79 ~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tG 158 (414)
+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++ +.+.+..|..| +|.|.|||
T Consensus 134 ~PwNfP~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~ag~p~gv~~~v~g-~~~~~~~l~~~--v~~v~FTG 210 (474)
T 4h7n_A 134 SPWNFPLTLSMIDTIPALLAGCAVVVKPSEIAPRFVAPLLMALNTVPELRDVLIFVEG-GGETGANLINY--VDFVCFTG 210 (474)
T ss_dssp ECSSSHHHHHHTTHHHHHHHTCEEEEEECTTSCTTHHHHHHHHTTCTTTTTTEEECCC-CHHHHHHHHTT--CSEEEEES
T ss_pred CCCCcHHHHHhcccCcchhcCCceeecccccCchHHHHHHhhhhhhcccccceeeccc-cchhhhhhhhc--cceEEecc
Confidence 9999999999999999999999999999999999999999999999999999999999 56788888865 89999999
Q ss_pred CHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHH
Q 015031 159 STDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEK 238 (414)
Q Consensus 159 s~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~ 238 (414)
|+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+|||++++|+|+++|+++
T Consensus 211 S~~~G~~i~~~aa-~~~~~v~lElGGk~p~iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~ 289 (474)
T 4h7n_A 211 SVATGREVAETAA-RRFIPAYLELGGKDPAIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAK 289 (474)
T ss_dssp CHHHHHHHHHHHH-HHTCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHH
T ss_pred ccchhhhhhhhhh-cccccccccCCCcCccccCchhhHHHHHHHHHhhhccCCCCceeecccccchHHHHHHHHHHHHHH
Confidence 9999999999988 789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccC-CCCceeeeEEEEeCCCCCcccccccccce
Q 015031 239 AKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG-KKGYYIEPTIFTNVTEDMLIAKNEIFGPV 317 (414)
Q Consensus 239 ~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv 317 (414)
++++++|+|.++++++||+++..+++++.+++++++++|+++++||.... .+|+|++|||+.+++++|++++||+||||
T Consensus 290 ~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~v~~Gg~~~~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPV 369 (474)
T 4h7n_A 290 AHRLQLAYPLVEDGAIGPIIAEKQAGIINDHILDAVEKGAVIHCGGKVEELGGGWWCRPTVMTNVNHSMKVMTEETFGPI 369 (474)
T ss_dssp HHHCCBCCSSGGGCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCEEETTEEECCCEEEESCCTTSGGGTSCCCSSE
T ss_pred hhccccCCCcccccccCccccHHHHHHHHHHHHHHHhhCceeccCCcccccCCCcccCceeEEeeccccccccccccCcE
Confidence 99999999999999999999999999999999999999999999998653 47899999999999999999999999999
Q ss_pred EEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCC--CCCCCCccCCCCCCCC-CcchHHH
Q 015031 318 MALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA--FDSDCPYGGYKMSGFG-RDCGLES 394 (414)
Q Consensus 318 l~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~--~~~~~pfgG~~~sG~g-~~~g~~~ 394 (414)
++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||+... ..+..||||+|.||+| +.+|.+|
T Consensus 370 l~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~v~iN~~~~~~~~~~~pfgG~~~SG~G~~~~G~~g 449 (474)
T 4h7n_A 370 MPVMPFPDVEEAVYLANDTIYGLSAAVFAGSEDEALKVARQLNAGAISINDAALTAMMHEGEKNAFNFSGLGGSRVGAAG 449 (474)
T ss_dssp EEEEEESSHHHHHHHHHCSSCCSEEEEECSSHHHHHHHHTTSCCSEEEESSSCGGGTCCCSCCCCCGGGEESCCSSTTHH
T ss_pred EEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEECCCCccCCcCCCCCCCcCCCCCCCCcchHHH
Confidence 999999999999999999999999999999999999999999999999999765 4578999999999998 7889999
Q ss_pred HHhhhcccEEEEeCC--CCCCC
Q 015031 395 LHNYLQVKSVVTPIF--NSPWL 414 (414)
Q Consensus 395 ~~~~~~~k~i~~~~~--~~~~~ 414 (414)
+++|+++|+|+++.. ..||+
T Consensus 450 ~~~f~~~k~v~~~~~~~~~p~w 471 (474)
T 4h7n_A 450 LKRFLRKQAFLIKTNSTSDPWW 471 (474)
T ss_dssp HHTTEEEEEEEEECSSSCCTTS
T ss_pred HHHhCeEEEEEECCCCCCCCCC
Confidence 999999999998753 45653
No 39
>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A
Probab=100.00 E-value=7.4e-87 Score=684.66 Aligned_cols=407 Identities=26% Similarity=0.425 Sum_probs=377.0
Q ss_pred CHHHHHHHHHh-HHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCcee-ccccCccccccccCCcEEEEE
Q 015031 1 MLKFADLIEEH-AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVL-KMSRALQGYTLREPIGVVGHI 78 (414)
Q Consensus 1 L~~~a~~l~~~-~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~Gvv~~i 78 (414)
|+++++.|+++ +++|++++++|+|||..++...++..+++.+++++..+++..+... ..+.+...+.++.|+|||++|
T Consensus 128 L~~~a~~l~~~~~~el~~~~~~e~Gk~~~ea~~e~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~p~GVV~~I 207 (563)
T 4e3x_A 128 FLKAADMLSGPRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGFVAAI 207 (563)
T ss_dssp HHHHHHHHHTTTHHHHHHHHHHHHCCCHHHHHHHTTHHHHHHHHHHHHHHHHHTTCCCCCCTTEEEEEECCBCSSEEEEE
T ss_pred HHHHHHHHHhccHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCcceEEEecCceEEEEE
Confidence 57899999999 9999999999999999986443499999999999999887765422 112234456778889999999
Q ss_pred cCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeC
Q 015031 79 IPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTG 158 (414)
Q Consensus 79 ~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tG 158 (414)
+|||||+....+++++|| +||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.++++.|+.||+++.|.|||
T Consensus 208 ~PwNfP~~~~~~~~apAL-aGNtVVlKPs~~tp~sa~~l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTG 286 (563)
T 4e3x_A 208 SPFNFTAIGGNLAGAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTG 286 (563)
T ss_dssp CCSSCHHHHHHHHHHHHH-TTCCEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEES
T ss_pred CCchHHHHHHHHHHHHhh-cCCEEEEECCCCChHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEEC
Confidence 999999999999999999 5999999999999999999999999999999999999998888999999999999999999
Q ss_pred CHHHHHHHHHHHhhCCCC------ceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHH
Q 015031 159 STDVGRQVMQAAATSNLK------PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFE 232 (414)
Q Consensus 159 s~~~~~~i~~~~~~~~~~------~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~ 232 (414)
|+.+|+.|.+.++ ++++ |+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+
T Consensus 287 St~vG~~i~~~aa-~~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~V~~si~d~f~ 365 (563)
T 4e3x_A 287 SVPTFKHLWRQVA-QNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIK 365 (563)
T ss_dssp CHHHHHHHHHHHH-HTTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHH
T ss_pred CHHHHHHHHHHHH-hhCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEecchHHHHH
Confidence 9999999999987 6666 59999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccccCCC-CCCCCCccccCCHHHHHHHHHHHHHhhh-cCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccc
Q 015031 233 KKLVEKAKAWVVGDP-FDPAVRQGPQVDKKQFDRILSYIEHGKR-EGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAK 310 (414)
Q Consensus 233 ~~l~~~~~~~~~g~~-~~~~~~~gpl~~~~~~~~~~~~i~~a~~-~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~ 310 (414)
++|+++++++++|+| .|+++++||++++.+++++.++|+++++ +|+++++||..+...|+|++|||+.+++++|++++
T Consensus 366 ~~l~~~~~~l~vGdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~~~~G~fv~PTvl~~v~~~~~i~~ 445 (563)
T 4e3x_A 366 GRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIMK 445 (563)
T ss_dssp HHHHHHHHTCCBSCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEECSSSCEECCEEEEESCTTCGGGT
T ss_pred HHHHHHHHhccCCCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccCCCCCcEecCEEEecCCCCChhhc
Confidence 999999999999999 9999999999999999999999999996 89999999987666899999999999999999999
Q ss_pred cccccceEEEeeeCC--HHHHHHHH-hcCCCCceEEEecCCHHHHHHHHhccc--eeEEEECCcCC--CCCCCCccCCCC
Q 015031 311 NEIFGPVMALMKFKT--VEEAIKSA-NNTRYGLAAGIMTKDLNVANTVSRSIR--AGIIWINCYFA--FDSDCPYGGYKM 383 (414)
Q Consensus 311 ~E~fgPvl~v~~~~~--~~eai~~~-n~~~~gl~~sv~s~d~~~~~~~~~~l~--~g~v~vN~~~~--~~~~~pfgG~~~ 383 (414)
||+||||++|++|+| +||||+++ |+++|||+++|||+|.+.+++++++++ +|+|+||+.++ ..+.+||||+|.
T Consensus 446 eEiFGPVl~V~~~~d~~~deAi~~ann~s~yGLta~V~t~d~~~~~~~~~~l~~~aG~v~IN~~~~~~~~~~~PFGG~k~ 525 (563)
T 4e3x_A 446 EEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARA 525 (563)
T ss_dssp SCCCSSEEEEEEECGGGHHHHHHHHHHSSSEESEEEEECSCHHHHHHHHHHTTTTCSEEEESSCSCCCCTTTSCCCCEET
T ss_pred CCCcCeEEEEEEECCCCHHHHHHHHHcCCCCCCEEEEEeCCHHHHHHHHHhhhcCeeEEEEcCCCCCCCcCCCCCCCccc
Confidence 999999999999997 79999999 789999999999999999999999976 99999999764 356899999999
Q ss_pred CCCC-CcchHHHHHhhhcccEEEEeCC
Q 015031 384 SGFG-RDCGLESLHNYLQVKSVVTPIF 409 (414)
Q Consensus 384 sG~g-~~~g~~~~~~~~~~k~i~~~~~ 409 (414)
||+| +.+|++++++|+++|+|..+..
T Consensus 526 SG~g~~~~G~~~l~~~~~~k~v~~~~~ 552 (563)
T 4e3x_A 526 SGTNDKPGGPHYILRWTSPQVIKETHK 552 (563)
T ss_dssp TBCCCCTTSTTGGGGGBCCEEEEEECS
T ss_pred cCCCCccCCHHHHHHhCceEEEEEeCc
Confidence 9998 8999999999999999988763
No 40
>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*
Probab=100.00 E-value=1.8e-85 Score=663.03 Aligned_cols=394 Identities=28% Similarity=0.448 Sum_probs=366.2
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCc-eecc---ccCccccccccCCcEEE
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE-VLKM---SRALQGYTLREPIGVVG 76 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~P~Gvv~ 76 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.++++++.+++.... .... ..+...+.+++|+|||+
T Consensus 56 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~ 135 (457)
T 3lns_A 56 LERLKEAVINNKEALYSALAEDLGKPKDVVDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTY 135 (457)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHHHCCCHHHHHHHTHHHHHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEE
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEE
Confidence 5789999999999999999999999999865469999999999999887765432 2211 13456789999999999
Q ss_pred EEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEE
Q 015031 77 HIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSF 156 (414)
Q Consensus 77 ~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~ 156 (414)
+|+|||||+...++++++||++||+||+|||+.+|.++..+++++.++ +|+|++|+++| +.+.+..|+. +++|.|.|
T Consensus 136 ~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~a-lP~gvv~vv~g-~~~~~~~L~~-~~vd~V~f 212 (457)
T 3lns_A 136 IIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEA-FAPEYVAVIQG-GRDENSHLLS-LPFDFIFF 212 (457)
T ss_dssp EECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHH-CCTTTEEECCC-CHHHHHHHTT-SCCSEEEE
T ss_pred EECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHh-CCHhhEEEecC-CHHHHHHHhc-CCCCEEEE
Confidence 999999999999999999999999999999999999999999999999 99999999999 6788999988 78999999
Q ss_pred eCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHH
Q 015031 157 TGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 236 (414)
Q Consensus 157 tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~ 236 (414)
|||+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+
T Consensus 213 TGS~~~G~~i~~~aa-~~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~ 291 (457)
T 3lns_A 213 TGSPNVGKVVMQAAA-KHLTPVVLELGGKCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLV 291 (457)
T ss_dssp ESCHHHHHHHHHHHH-TTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHH
T ss_pred ECCHHHHHHHHHHHh-hccCceEEECCCCCCCeECCCCCHHHHHHHHHHHHHHhCCCCccCCceEEEcHHHHHHHHHHHH
Confidence 999999999999988 8899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccc
Q 015031 237 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGP 316 (414)
Q Consensus 237 ~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 316 (414)
+++++++ |.++ ++||++++.++++++++++++. +++++||... .+|+|++|||+.+++++|++++||+|||
T Consensus 292 ~~~~~~~---p~~~--~~gpli~~~~~~rv~~~i~~a~---~~~~~gg~~~-~~g~~~~Ptvl~~v~~~~~i~~eEiFGP 362 (457)
T 3lns_A 292 ERVKTEL---PEIN--STGKLVTERQVQRLVSLLEATQ---GQVLVGSQAD-VSKRALSATVVDGVEWNDPLMSEELFGP 362 (457)
T ss_dssp HHHHHHC---CSTT--TTCCCSSHHHHHHHHHHHHHCC---SEEEECCCEE-GGGTEECCEEEESCCTTSGGGSSCCCSS
T ss_pred HHHHhcC---CCcc--cccCCCCHHHHHHHHHHHHhcC---CeEEeCCccC-CCCceeCCEEEecCCCCChhhcCcccCc
Confidence 9999987 6665 9999999999999999999864 5999999764 3789999999999999999999999999
Q ss_pred eEEEeeeCCHHHHHHHHhc-CCCCceEEEecCCHHHHHHHHhccceeEEEECCcCC--CCCCCCccCCCCCCCCCcchHH
Q 015031 317 VMALMKFKTVEEAIKSANN-TRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA--FDSDCPYGGYKMSGFGRDCGLE 393 (414)
Q Consensus 317 vl~v~~~~~~~eai~~~n~-~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~--~~~~~pfgG~~~sG~g~~~g~~ 393 (414)
|++|++|+|+||||+++|+ ++|||+++|||+|.+.++++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+
T Consensus 363 Vl~v~~~~~~deAi~~aN~~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~g~~ 442 (457)
T 3lns_A 363 ILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHGHF 442 (457)
T ss_dssp EEEEEEESCHHHHHHHHHHHSCSCSEEEEECSCHHHHHHHHHTSCCSEEEESCCSGGGGCTTSCBCCCGGGEECCBSHHH
T ss_pred EEEEEEeCCHHHHHHHHHcCCCCCeEEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCcCCcCcCCCCCCchHH
Confidence 9999999999999999999 999999999999999999999999999999999853 4688999999999999999999
Q ss_pred HHHhhhcccEEEEe
Q 015031 394 SLHNYLQVKSVVTP 407 (414)
Q Consensus 394 ~~~~~~~~k~i~~~ 407 (414)
|+++||+.|+|++.
T Consensus 443 ~~~~f~~~k~v~~~ 456 (457)
T 3lns_A 443 SYLTFTHKKSVRIV 456 (457)
T ss_dssp HHHHTEEEEEEEEC
T ss_pred HHHHhhCeeEEEeC
Confidence 99999999998763
No 41
>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}
Probab=100.00 E-value=2.9e-85 Score=666.47 Aligned_cols=398 Identities=27% Similarity=0.401 Sum_probs=372.6
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccccCccccccccCCcEEEEEcC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++...++..+...+...+...+.+++|+|||++|+|
T Consensus 70 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P 148 (490)
T 3ju8_A 70 LERFAATLKSRADELARVIGEETGKPLWES-ATEVTSMVNKVAISVQAFRERTGEKSGPLADATAVLRHKPHGVVAVFGP 148 (490)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHHHHSCCEEEEETTEEEEEEEEECSEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCCccccCCCCeeeEEECCCCEEEEECC
Confidence 578999999999999999999999999975 5799999999999998887766554332233455677999999999999
Q ss_pred CCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCCH
Q 015031 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|++++ +.+.++.|+.||++|.|.||||+
T Consensus 149 wN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~V~fTGS~ 227 (490)
T 3ju8_A 149 YNFPGHLPNGHIVPALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSS 227 (490)
T ss_dssp SSSTTHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHTTCCTTTEEECCC-SHHHHHHHHTCTTCSEEEEESCH
T ss_pred CcchHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEECcH
Confidence 99999999999999999999999999999999999999999999999999999999 67899999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCce-eeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCcc-HHHHHHHHHHH
Q 015031 161 DVGRQVMQAAATSNLKPV-SLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGI-YDEFEKKLVEK 238 (414)
Q Consensus 161 ~~~~~i~~~~~~~~~~~~-~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~-~~~f~~~l~~~ 238 (414)
.+|+.|.+.++ ++++|+ ++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||+++ +|+|+++|+++
T Consensus 228 ~~g~~i~~~aa-~~~~~v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~ 306 (490)
T 3ju8_A 228 RTGNLLHSQFG-GQPQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAV 306 (490)
T ss_dssp HHHHHHHHHTT-TCTTSEEEEECCCCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEESSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhh-ccCCCcEEeecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCCEEEEECCccHHHHHHHHHHH
Confidence 99999999987 788998 7999999999999999999999999999999999999999999999996 99999999999
Q ss_pred HhccccCC-CCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccce
Q 015031 239 AKAWVVGD-PFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPV 317 (414)
Q Consensus 239 ~~~~~~g~-~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv 317 (414)
++++++|+ |.|+++++||+++..+++++++++++++++|+++++||...+.+|+|++|||+. ++++|++++||+||||
T Consensus 307 ~~~~~~G~~~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl~-v~~~~~i~~eEiFGPV 385 (490)
T 3ju8_A 307 SATLRVGRFDEQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGAALLTPGILD-VSAVAERPDEEFFGPL 385 (490)
T ss_dssp HHHCCBCCTTCSSCCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCCCSTTSCCCCCEEEE-CTTCSSCCCCCCCSSE
T ss_pred HHhccCCCCCCCCcCccccccCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCCEEccEEEE-eCCCCccccccccccE
Confidence 99999999 999999999999999999999999999999999999998765689999999998 9999999999999999
Q ss_pred EEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCC-CCCCCCccCCCCCCCCCcchHHHHH
Q 015031 318 MALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA-FDSDCPYGGYKMSGFGRDCGLESLH 396 (414)
Q Consensus 318 l~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~-~~~~~pfgG~~~sG~g~~~g~~~~~ 396 (414)
++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++.. ..+.+||||+|.||.+ +++
T Consensus 386 l~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~~~SG~~------~~~ 459 (490)
T 3ju8_A 386 LQVIRYSDFAAAIREANATQYGLAAGLLSDSRERFEQFLVESRAGIVNWNKQLTGAASSAPFGGIGASGNH------RPS 459 (490)
T ss_dssp EEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSCSSCCCTTSEECCCGGGBSS------CCE
T ss_pred EEEEEeCCHHHHHHHHhcCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCcCCCCCCCCcCCccccchh------HHH
Confidence 999999999999999999999999999999999999999999999999999865 4578999999999974 589
Q ss_pred hhhcccEEEEeC
Q 015031 397 NYLQVKSVVTPI 408 (414)
Q Consensus 397 ~~~~~k~i~~~~ 408 (414)
+|++.|+|+++.
T Consensus 460 ~~~~~k~v~~~~ 471 (490)
T 3ju8_A 460 AYYAADYCAYPV 471 (490)
T ss_dssp ETTHHHHHEEEE
T ss_pred hhheeEEEEEec
Confidence 999999987754
No 42
>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}
Probab=100.00 E-value=7.1e-85 Score=704.33 Aligned_cols=406 Identities=33% Similarity=0.529 Sum_probs=382.3
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceecc-ccCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++.++++..+..... ..+..++..++|+|||++|+
T Consensus 596 L~~~Adll~~~~~eLa~~~~~E~GK~~~ea-~~Ev~~aid~lr~~a~~~~~~~~~~~~~~~~g~~~~~~~~PlGVV~~I~ 674 (1026)
T 4f9i_A 596 LLKAAQAARKRLFELSAWQVLEIGKQWDQA-YADVTEAIDFLEYYAREMIRLGQPQRVGHAPGELNHYFYEPKGVAAVIA 674 (1026)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHTCCCHHHH-HHHHHHHHHHHHHHHHHHHHHTSCEEECCCTTEEEEEEEEECSEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCChhhH-HHHHHHHHHHHHHHHHHHHHhcCCccccCCCCccceeEeecCceEEEeC
Confidence 578999999999999999999999999975 5799999999999999988776543322 34567788999999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCC
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.++++.|+.||+++.|.||||
T Consensus 675 PwNfPl~i~~~~~a~ALaaGNtVVlKPse~tplsa~~l~ell~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGS 754 (1026)
T 4f9i_A 675 PWNFPLAISMGMASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGS 754 (1026)
T ss_dssp CSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESC
T ss_pred CCccHHHHHHHHHHHHHHcCCEEEEEcCccchHHHHHHHHHHHHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCC
Confidence 99999999999999999999999999999999999999999999999999999999988889999999999999999999
Q ss_pred HHHHHHHHHHHhh-----CCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHH
Q 015031 160 TDVGRQVMQAAAT-----SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 234 (414)
Q Consensus 160 ~~~~~~i~~~~~~-----~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~ 234 (414)
+.+|+.|.+.++. ++++|+++|+|||||+||++|||++.|++.+++|+|.|+||.|++++++|||++++|+|+++
T Consensus 755 t~vg~~I~~~aa~~~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~~rl~V~~~i~d~f~~~ 834 (1026)
T 4f9i_A 755 METGLRIIERAAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIER 834 (1026)
T ss_dssp HHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHH
T ss_pred HHHHHHHHHHhhcccccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCCCCceEEecHHHHHHHHHH
Confidence 9999999998762 46799999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccc
Q 015031 235 LVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIF 314 (414)
Q Consensus 235 l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~f 314 (414)
|+++++++++|+|.++++++||+++..+++++.++|++++++| ++++||..+...|+|++|||+.+++++|++++||+|
T Consensus 835 L~~~~~~l~vG~p~d~~t~~Gpvi~~~~~~~v~~~i~~a~~~G-~~v~gG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiF 913 (1026)
T 4f9i_A 835 LVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREG-HVLYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIF 913 (1026)
T ss_dssp HHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHHS-EEEEECCCCSSSSCCCCCEEEESCCTTSGGGTSCCC
T ss_pred HHHHHHhcccCCcccccCccccccCHHHHHHHHHHHHHHHhCC-eEEecCCcCCCCCceecceeeecCCCCccccCceec
Confidence 9999999999999999999999999999999999999999999 999999765545999999999999999999999999
Q ss_pred cceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCC--CCCCCCccCCCCCCCCC-cch
Q 015031 315 GPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA--FDSDCPYGGYKMSGFGR-DCG 391 (414)
Q Consensus 315 gPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~--~~~~~pfgG~~~sG~g~-~~g 391 (414)
|||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||+.++ ..+.+||||+|.||+|+ .+|
T Consensus 914 GPVl~V~~~~d~deAI~~aN~t~yGLt~~V~t~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~~~PFGG~k~SG~G~~~gG 993 (1026)
T 4f9i_A 914 GPVLAVMRAKDFDQAIEWANSTQFALTGGIFSRSPEHLAKARREFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAGG 993 (1026)
T ss_dssp SSEEEEEEESSHHHHHHHHTCSSCCSEEEEECCCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCCGGGBSSCCBTS
T ss_pred CcEEEEEEeCCHHHHHHHHHcCCCCCeEEEECCCHHHHHHHHHhCCEeeEEEcCCCCCCCCCCCCCCCcCcCCCCCCcCC
Confidence 999999999999999999999999999999999999999999999999999999765 34789999999999994 689
Q ss_pred HHHHHhhhcccEEEEeC
Q 015031 392 LESLHNYLQVKSVVTPI 408 (414)
Q Consensus 392 ~~~~~~~~~~k~i~~~~ 408 (414)
++++++|+++|+|+.+.
T Consensus 994 ~~~l~~f~~~k~v~~~~ 1010 (1026)
T 4f9i_A 994 PDYLLHFMDPRVVTENT 1010 (1026)
T ss_dssp TTTGGGGEEEEEEEEEC
T ss_pred HHHHHHhceEEEEEEec
Confidence 99999999999998865
No 43
>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*
Probab=100.00 E-value=1.5e-83 Score=660.23 Aligned_cols=401 Identities=23% Similarity=0.327 Sum_probs=362.2
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCc-------eeccc-cC-ccccccccC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE-------VLKMS-RA-LQGYTLREP 71 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~-------~~~~~-~~-~~~~~~~~P 71 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++.+++++.+. ..+.. .+ ...+..++|
T Consensus 72 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P 150 (534)
T 2y53_A 72 LADIVKLLQAKRGDYYAIATANSGTTRNDS-AVDIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSP 150 (534)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEEEEEEEE
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHhccccccccCCccccCCCCCcccceEEEec
Confidence 578999999999999999999999999976 469999999999999887665432 11211 11 134678899
Q ss_pred C-cEEEEEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcC-CCCCeEEEEcCCchhHHHHHHhCC
Q 015031 72 I-GVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG-VPDGVLNVVPGFGPTAGAAIASHM 149 (414)
Q Consensus 72 ~-Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~ag-lp~g~v~~~~~~~~~~~~~l~~~~ 149 (414)
+ |||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++| +|+|++|+++|++.+++.. .+
T Consensus 151 ~~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~~l~~~---l~ 227 (534)
T 2y53_A 151 TRGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGSSAGLLDQ---IR 227 (534)
T ss_dssp CSSCEEEECCTTCTTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHTCSCTTSEEECCSCCTTSGGG---CC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCeEEEEeCChHHHHhc---cc
Confidence 7 99999999999999999999999999999999999999999999999999999 7999999999865443222 25
Q ss_pred CcCeEEEeCCHHHHHHHHHHHh-hCCCCceeeeCCCCCceeecCCC-----CHHHHHHHHHHHHhcccCCccccCcEEEE
Q 015031 150 DIDKVSFTGSTDVGRQVMQAAA-TSNLKPVSLELGGKSPLLIFDDV-----DVNTAADMALLGILFNKGEICVASSRVYV 223 (414)
Q Consensus 150 ~~~~v~~tGs~~~~~~i~~~~~-~~~~~~~~~e~gG~~~~iV~~da-----dl~~a~~~i~~~~~~~~Gq~C~a~~~v~V 223 (414)
.+|.|.||||+.+|+.|.+.++ .++++|+++|+|||||+||++|| |++.|++.+++++|.|+||.|++++||||
T Consensus 228 ~vd~V~FTGS~~~G~~i~~~aa~a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV 307 (534)
T 2y53_A 228 SFDVVSFTGSADTAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFV 307 (534)
T ss_dssp TTCEEEEESCHHHHHHHHTSHHHHTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSEEEEEE
T ss_pred ccCEEEEECCHHHHHHHHHhhhhhcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCCCEEEE
Confidence 7999999999999999998753 37899999999999999999999 99999999999999999999999999999
Q ss_pred eCccHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccC------CCCceeeeE
Q 015031 224 QEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG------KKGYYIEPT 297 (414)
Q Consensus 224 ~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~------~~g~~~~Pt 297 (414)
|++++|+|+++|+++++++++|+|.|+++++||++++.++++++++|+++ .+|+++++||.... ..|+|++||
T Consensus 308 ~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a-~~ga~~~~GG~~~~~~~~~~~~g~~~~PT 386 (534)
T 2y53_A 308 PEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAAL-REEAVLAYDSSAVPLIDADANIAACVAPH 386 (534)
T ss_dssp EGGGHHHHHHHHHHHHTTCCBBCTTSTTCSBCCCSCHHHHHHHHHHHHHH-HTSSEEEEECTTSCCBSCCTTTSCCCCCE
T ss_pred eccHHHHHHHHHHHHHHhccCCCCCcCCCCccCCCCHHHHHHHHHHHHHH-HcCCEEEECCcccccccccCCCCceecCE
Confidence 99999999999999999999999999999999999999999999999999 68999999997421 368999999
Q ss_pred EEEeCCCC--CcccccccccceEEEeeeC---CH-----HHHHHHHhcCCCCceEEEecCCHHHHHHHHhcc--ceeEEE
Q 015031 298 IFTNVTED--MLIAKNEIFGPVMALMKFK---TV-----EEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI--RAGIIW 365 (414)
Q Consensus 298 vl~~~~~~--~~~~~~E~fgPvl~v~~~~---~~-----~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l--~~g~v~ 365 (414)
|+.+++++ |++++||+||||++|++|+ |. ||||+++|+++|||++||||+|.+.++++++++ ++|+|+
T Consensus 387 vl~~v~~~~~~~i~~eEiFGPVl~v~~~~~~~~~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~~aG~V~ 466 (534)
T 2y53_A 387 LFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVH 466 (534)
T ss_dssp EEECSCGGGCSSTTTCCCSSSEEEEEEECCCCC---CTTHHHHHHHHTTSSEEEEEEECSCHHHHHHHHHHHTTTEEEEE
T ss_pred EEEecCccccCHHHhCCCcCCEEEEEEECCCCCcccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHHHhhCCEEE
Confidence 99999987 6899999999999999999 99 999999999999999999999999999999999 899999
Q ss_pred ECCcCC---------CCCCCCccCCCCCCCCCc-chHHHHHhhhcccEEEE
Q 015031 366 INCYFA---------FDSDCPYGGYKMSGFGRD-CGLESLHNYLQVKSVVT 406 (414)
Q Consensus 366 vN~~~~---------~~~~~pfgG~~~sG~g~~-~g~~~~~~~~~~k~i~~ 406 (414)
||++.. ..+.+||||+|.||+|++ +|.+++++|+++|++..
T Consensus 467 vN~~~~~~~~~~~~~~~~~~pfGG~k~SG~Gr~~~g~~~l~~~~~~k~v~~ 517 (534)
T 2y53_A 467 AISPSVQHSQTGHGNVMPMSLHGGPGRAGGGEELGGLRALAFYHRRSAIQA 517 (534)
T ss_dssp EECGGGTTTCCCSSCCCTTSEECCSGGGCSCCEESGGGGGGGGEEEEEEEE
T ss_pred EcCCcccccccccCCCCCCCCCCCcccCCCCCCcchHHHHHHHhhhheeec
Confidence 998642 357899999999999999 69999999999999876
No 44
>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}
Probab=100.00 E-value=3.1e-82 Score=682.34 Aligned_cols=401 Identities=29% Similarity=0.458 Sum_probs=374.7
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCce--eccccCccccccccCCcEEEEE
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV--LKMSRALQGYTLREPIGVVGHI 78 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~P~Gvv~~i 78 (414)
|+++++.|++|+++|+++++.|+|||..++ ..|+..+++.+++++..+++..+.. .+...+...+++++|+|||++|
T Consensus 578 L~~~ad~l~~~~~eLa~~~~~E~GK~~~ea-~~Ev~~ai~~lr~~a~~a~~~~g~~~~~~~~~g~~~~~~~~P~GVV~~I 656 (1001)
T 3haz_A 578 LEQAAHLLESRSAHFIALLQREGGKTLDDA-LSELREAADFCRYYAAQGRKLFGSETAMPGPTGESNALTMRGRGVFVAI 656 (1001)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHTTCCCHHHH-HHHHHHHHHHHHHHHHHHHHHHSSCEECCCCTTEEEEEEEEECSEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCChhHH-HHHHHHHHHHHHHHHHHHHhhcCccccccCCCCCceEEEEeCCcEEEEE
Confidence 578999999999999999999999999975 6799999999999999988766543 3334566788999999999999
Q ss_pred cCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeC
Q 015031 79 IPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTG 158 (414)
Q Consensus 79 ~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tG 158 (414)
+|||||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++|++.+ +..|+.||++|.|+|||
T Consensus 657 ~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~eAGlP~gvv~vV~G~g~~-g~~L~~~p~Vd~V~FTG 735 (1001)
T 3haz_A 657 SPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEAGIPKSALYLVTGDGRI-GAALTAHPDIAGVVFTG 735 (1001)
T ss_dssp CCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHHTCCTTTEEECCCCHHH-HHHHHHCTTCCEEEEES
T ss_pred cCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHHHhCcCcCcEEEEecCchH-HHHHHhCCCcCEEEecC
Confidence 99999999999999999999999999999999999999999999999999999999998777 99999999999999999
Q ss_pred CHHHHHHHHHHHhhC--CCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHH
Q 015031 159 STDVGRQVMQAAATS--NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 236 (414)
Q Consensus 159 s~~~~~~i~~~~~~~--~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~ 236 (414)
|+.+|+.|.+.++.+ +.+|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+
T Consensus 736 St~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa~~iv~s~f~naGQ~C~A~~rllV~e~i~d~f~~~L~ 815 (1001)
T 3haz_A 736 STEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVADDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVA 815 (1001)
T ss_dssp CHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHHHHHHHHHHHhCCCCCCCCCceeeccHHHHHHHHHHHH
Confidence 999999999988743 479999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccc
Q 015031 237 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGP 316 (414)
Q Consensus 237 ~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 316 (414)
++++++++|+|.++++++||+++..+++++.++|++++++| ++ +||..+. .|+|+.|||+.+ +++.+++||+|||
T Consensus 816 ~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g-~v-~gg~~~~-~G~fv~PTvl~~--~~~~~~~eEiFGP 890 (1001)
T 3haz_A 816 GAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEA-RL-HFAGPAP-EGCFVAPHIFEL--TEAGQLTEEVFGP 890 (1001)
T ss_dssp HHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EE-EEECCCC-SSSCCCCEEEEC--SSGGGCCSCCCSS
T ss_pred HHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcC-eE-eccccCC-CCcEEeeEEecC--CCHHHHhccccCc
Confidence 99999999999999999999999999999999999999888 88 8887653 699999999974 6788999999999
Q ss_pred eEEEeeeCC--HHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCC--CCCCCccCCCCCCCC-Ccch
Q 015031 317 VMALMKFKT--VEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAF--DSDCPYGGYKMSGFG-RDCG 391 (414)
Q Consensus 317 vl~v~~~~~--~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~--~~~~pfgG~~~sG~g-~~~g 391 (414)
|++|++|++ +||||+++|+++|||+++|||+|.+.++++++++++|+|+||+.... .+.+||||+|.||+| +.+|
T Consensus 891 VL~V~~~~~~~ldeAI~~aN~t~yGLta~V~T~d~~~a~~~a~~l~aG~V~VN~~~~~~~~~~~PFGG~k~SG~G~~~gG 970 (1001)
T 3haz_A 891 ILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQVGNIYVNRNMIGAVVGVQPFGGNGLSGTGPKAGG 970 (1001)
T ss_dssp EEEEEEECGGGHHHHHHHHHHTCCCSEEEEECSCHHHHHHHHHHCCCSEEEESSCSCCCCTTTSCBCCCGGGBCCCCBTS
T ss_pred EEEEEEeCCCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHhCCeeeEEEeCCCcCCCCCCCCCCCcccCcCCCCCCC
Confidence 999999996 89999999999999999999999999999999999999999998653 357899999999999 5789
Q ss_pred HHHHHhhhcccEEEEeC
Q 015031 392 LESLHNYLQVKSVVTPI 408 (414)
Q Consensus 392 ~~~~~~~~~~k~i~~~~ 408 (414)
++++++|++.|+|+++.
T Consensus 971 ~~gl~~ft~~K~v~~~~ 987 (1001)
T 3haz_A 971 PHYLARFATEQTVTINT 987 (1001)
T ss_dssp TTSGGGGEEEEEEEEEC
T ss_pred HHHHHHhceeeEEEECC
Confidence 99999999999998875
No 45
>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}
Probab=100.00 E-value=9.2e-80 Score=631.39 Aligned_cols=390 Identities=23% Similarity=0.300 Sum_probs=353.5
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhh--cCceec----c---ccCccccccccC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKI--HGEVLK----M---SRALQGYTLREP 71 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~--~~~~~~----~---~~~~~~~~~~~P 71 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++..+++. ...... . ..+...+.+++|
T Consensus 91 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 169 (528)
T 3v4c_A 91 LRAIADEIEARAEAITEIGSQETGLPEARL-NGERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRP 169 (528)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEEEE
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHhhccccccccccccccccCCCCCcceeEeeC
Confidence 578999999999999999999999999875 579999999999999988762 222221 0 023456789999
Q ss_pred CcEEEEEcCCCcChHhhH--HHHHHHHhcCCeEEEecCCCChhHHHHHHHHH----HHcCCCCCeEEEEcCCchhHHHHH
Q 015031 72 IGVVGHIIPWNFPTTMFF--MKVSPALAAGCTMIVKPAEQTPLIALYFAHLA----KLAGVPDGVLNVVPGFGPTAGAAI 145 (414)
Q Consensus 72 ~Gvv~~i~p~n~P~~~~~--~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~----~~aglp~g~v~~~~~~~~~~~~~l 145 (414)
+|||++|+|||||+...+ +++++||++||+||+|||+.+|.++..+++++ .++|+|+|++|++++++.++++.|
T Consensus 170 ~GVv~~I~PwN~P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L 249 (528)
T 3v4c_A 170 VGPVAVFGASNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHAL 249 (528)
T ss_dssp CSCEEEECCSSSTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHH
T ss_pred CcEEEEECCCcchHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHH
Confidence 999999999999999865 89999999999999999999999999998875 568999999999999888899999
Q ss_pred HhCCCcCeEEEeCCHHHHHHHHHHHhhCCC--CceeeeCCCCCceeecCCC---CHHHHHHHHHHHHhcccCCccccCcE
Q 015031 146 ASHMDIDKVSFTGSTDVGRQVMQAAATSNL--KPVSLELGGKSPLLIFDDV---DVNTAADMALLGILFNKGEICVASSR 220 (414)
Q Consensus 146 ~~~~~~~~v~~tGs~~~~~~i~~~~~~~~~--~~~~~e~gG~~~~iV~~da---dl~~a~~~i~~~~~~~~Gq~C~a~~~ 220 (414)
+.||++|.|.||||+.+|+.|.+.++ +++ +|+++|+|||||+||++|| |++.|++.+++++|.|+||.|++++|
T Consensus 250 ~~~p~v~~V~fTGS~~~G~~i~~~aa-~~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~~r 328 (528)
T 3v4c_A 250 VQHPHIKAVGFTGSLAGGRALFDLCA-ARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGI 328 (528)
T ss_dssp HHCTTCCEEEEESCHHHHHHHHHHHH-HSSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGGGGCCTTCCCE
T ss_pred HhCCCCCEEEEECChHHHHHHHHHHh-hccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHHhcCCCccccCcE
Confidence 99999999999999999999999987 777 8999999999999999999 88999999999999999999999999
Q ss_pred EEEeCc-cHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEE
Q 015031 221 VYVQEG-IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIF 299 (414)
Q Consensus 221 v~V~~~-~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl 299 (414)
||||++ ++|+|+++|++++++++. ++.+||+++..+.++++++++ ++|+++++||.. .|+|++|||+
T Consensus 329 vlV~~~~i~d~f~~~l~~~~~~~~~------~~~~gp~~~~~~~~~v~~~~~---~~Ga~v~~gG~~---~g~~~~PTvl 396 (528)
T 3v4c_A 329 AVVIEGADADRFTTAAVEALAKVAP------QTMLTDGIAKAYRDGQARFAT---RNAVKPLLATES---SGRDASPNLF 396 (528)
T ss_dssp EEEESSHHHHHHHHHHHHHHHTCCC------EECSCHHHHHHHHHHHHHHHT---CTTCEEEECCCC---CTTEECCEEE
T ss_pred EEEecccHHHHHHHHHHHHHHhccc------CCCCCHHHHHHHHHHHHHHHH---hCCCEEEeCCCc---CCceeccEEE
Confidence 999997 999999999999999864 357899998888888877763 478999999975 7999999999
Q ss_pred EeCCCC---CcccccccccceEEEeeeCCHHHHHHHHhcCCCCceEEEecC--CHHHHHHHHhccc--eeEEEECCcCC-
Q 015031 300 TNVTED---MLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTK--DLNVANTVSRSIR--AGIIWINCYFA- 371 (414)
Q Consensus 300 ~~~~~~---~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~--d~~~~~~~~~~l~--~g~v~vN~~~~- 371 (414)
.+++++ |++++||+||||++|++|+|+||||+++|+++|||+++|||+ |.+.+++++++++ +|+|+||++++
T Consensus 397 ~~~~~~~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~GL~a~v~t~d~d~~~a~~~a~~l~~~aG~V~vN~~~~~ 476 (528)
T 3v4c_A 397 ETTGAQFLADHALGEEVFGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLRPVLERKAGRVLVNGFPTG 476 (528)
T ss_dssp EEEHHHHHHCGGGGCCCSSSEEEEEEESSHHHHHHHHHHCCCEEEEEEECCGGGHHHHHHHHHHHHHHEEEEEESSCTTC
T ss_pred EecCcccccChhhcccccCCeEEEEecCCHHHHHHHHhcCCCCceEEEEcCCCCHHHHHHHHHHHhhcCcEEEEcCCCCC
Confidence 988887 899999999999999999999999999999999999999999 8899999999998 99999999765
Q ss_pred --CCCCCCccC-CCCCCCCCcc--hHHHHHhhhcccEE
Q 015031 372 --FDSDCPYGG-YKMSGFGRDC--GLESLHNYLQVKSV 404 (414)
Q Consensus 372 --~~~~~pfgG-~~~sG~g~~~--g~~~~~~~~~~k~i 404 (414)
..+.+|||| +|.||+|+++ |++|+++|+++|++
T Consensus 477 ~~~~~~~pfGG~~~~Sg~gr~~~~G~~gl~~~~~~k~~ 514 (528)
T 3v4c_A 477 VEVVDSMVHGGPYPASTNFGATSVGTMSIRRFLRPVAY 514 (528)
T ss_dssp CCCSTTCCCCCTTTTBSCTTCCSSSGGGGGGGEEEEEE
T ss_pred CccCCCCCCCCCCCCCCCCCCCCCcHHHHHHhchhHHh
Confidence 357899999 9999999976 99999999999875
No 46
>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*
Probab=100.00 E-value=2.2e-79 Score=626.19 Aligned_cols=389 Identities=21% Similarity=0.281 Sum_probs=351.6
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhh--hcCceec----c--ccC-ccccccccC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADK--IHGEVLK----M--SRA-LQGYTLREP 71 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~--~~~~~~~----~--~~~-~~~~~~~~P 71 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.++++++.+++ ..+..+. . +.+ ...+.+++|
T Consensus 58 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 136 (510)
T 1ez0_A 58 LRTIASELEARSDDIIARAHLETALPEVRL-TGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIA 136 (510)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEE
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEec
Confidence 578999999999999999999999999864 67999999999999988865 3333221 1 111 135789999
Q ss_pred CcEEEEEcCCCcChHhh--HHHHHHHHhcCCeEEEecCCCChhHHHHHHHHH----HHcCCCCCeEEEEcCCchhHHHHH
Q 015031 72 IGVVGHIIPWNFPTTMF--FMKVSPALAAGCTMIVKPAEQTPLIALYFAHLA----KLAGVPDGVLNVVPGFGPTAGAAI 145 (414)
Q Consensus 72 ~Gvv~~i~p~n~P~~~~--~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~----~~aglp~g~v~~~~~~~~~~~~~l 145 (414)
+|||++|+|||||+... .+++++||++||+||+|||+.+|+++..+++++ .++|+|+|++|+++|++.++++.|
T Consensus 137 ~GVv~~I~PwN~P~~~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L 216 (510)
T 1ez0_A 137 LGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQAL 216 (510)
T ss_dssp CSCEEEECCSSCTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHH
T ss_pred CcEEEEECCccchhhhhhhHHHHHHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHH
Confidence 99999999999999985 499999999999999999999999999999998 567999999999999777899999
Q ss_pred HhCCCcCeEEEeCCHHHHHHHHHHHhhCCC--CceeeeCCCCCceeecCCCCHH--HHHHHHHHHHhcccCCccccCcEE
Q 015031 146 ASHMDIDKVSFTGSTDVGRQVMQAAATSNL--KPVSLELGGKSPLLIFDDVDVN--TAADMALLGILFNKGEICVASSRV 221 (414)
Q Consensus 146 ~~~~~~~~v~~tGs~~~~~~i~~~~~~~~~--~~~~~e~gG~~~~iV~~dadl~--~a~~~i~~~~~~~~Gq~C~a~~~v 221 (414)
+.||++|.|.||||+.+|+.|.+.++ +++ +|+++|+|||||+||++|||++ .|++.+++++|.|+||.|++++||
T Consensus 217 ~~~p~v~~I~FTGS~~~G~~i~~~aa-~~l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rv 295 (510)
T 1ez0_A 217 VSHPEIKAVGFTGSVGGGRALFNLAH-ERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVV 295 (510)
T ss_dssp HHCTTCCEEEEESCHHHHHHHHHHHH-HSSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEE
T ss_pred HcCCCCCEEEEeCcHHHHHHHHHHhh-ccCCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCCCEE
Confidence 99999999999999999999999887 564 9999999999999999999999 999999999999999999999999
Q ss_pred EEeCc-cHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhh-cCCeEeeCCcccCCCCceeeeEEE
Q 015031 222 YVQEG-IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKR-EGATLLTGGKPIGKKGYYIEPTIF 299 (414)
Q Consensus 222 ~V~~~-~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~-~ga~v~~gg~~~~~~g~~~~Ptvl 299 (414)
|||++ ++|+|+++|+++++++++ ||++++.+.+++.++++++++ +|+++++||. .|+|++|||+
T Consensus 296 lV~~~~i~d~f~~~l~~~~~~~~~----------gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~----~g~~~~Ptvl 361 (510)
T 1ez0_A 296 FALNTPETQAFIETAQSLIRQQSP----------STLLTPGIRDSYQSQVVSRGSDDGIDVTFSQA----ESPCVASALF 361 (510)
T ss_dssp EEESSHHHHHHHHHHHHHHHHCCC----------BCCSSHHHHHHHHHHHHHHHTSTTEEEEECCC----CTTSBCCEEE
T ss_pred EEeCCccHHHHHHHHHHHHHhcCC----------CCCCCHHHHHHHHHHHHHHHhcCCCEEEecCC----CCCEecCEEE
Confidence 99999 999999999999998864 678888899999999999884 7999999997 2899999999
Q ss_pred EeCCCC---CcccccccccceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCH--HHHHHHHhcc--ceeEEEECCcCC-
Q 015031 300 TNVTED---MLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDL--NVANTVSRSI--RAGIIWINCYFA- 371 (414)
Q Consensus 300 ~~~~~~---~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~--~~~~~~~~~l--~~g~v~vN~~~~- 371 (414)
.+++++ |++++||+||||++|++|+|+||||+++|+++|||++||||+|. +.++++++++ ++|+|+||++..
T Consensus 362 ~~~~~~~~~~~i~~eEiFGPVl~v~~~~~~deai~~aN~~~~gLaa~v~t~d~~~~~a~~~~~~l~~~aG~V~iN~~~~~ 441 (510)
T 1ez0_A 362 VTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTG 441 (510)
T ss_dssp EEEHHHHHHCGGGGSCCCSSEEEEEEESSHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSC
T ss_pred EecCCccccCHHHcCCccCCeEEEEEeCCHHHHHHHHhcCCCCeEEEEEccCcCHHHHHHHHHHHhhcccEEEECCCCcc
Confidence 988777 99999999999999999999999999999999999999999987 7899999999 799999999764
Q ss_pred --CCCCCCccC-CCCCCCCC--cchHHHHHhhhcccEEE
Q 015031 372 --FDSDCPYGG-YKMSGFGR--DCGLESLHNYLQVKSVV 405 (414)
Q Consensus 372 --~~~~~pfgG-~~~sG~g~--~~g~~~~~~~~~~k~i~ 405 (414)
..+.+|||| +|.||.|+ .+|.+|+++|+++|++.
T Consensus 442 ~~~~~~~pfGG~~~~sG~g~~~~~G~~gl~~~~~~k~~~ 480 (510)
T 1ez0_A 442 VEVGYAMVHGGPYPASTHSASTSVGAEAIHRWLRPVAYQ 480 (510)
T ss_dssp CCCSSSCCCCCSTTSCSCSSCCSSSGGGGGGGEEEEEEE
T ss_pred CccCCCCCCCCCCCCcCCCCCCCccHHHHHHhheEEEEc
Confidence 457899999 78899875 37999999999998764
No 47
>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}
Probab=100.00 E-value=4.7e-75 Score=588.05 Aligned_cols=384 Identities=19% Similarity=0.214 Sum_probs=336.7
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcC-ceeccccCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHG-EVLKMSRALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+||+..++...+...+++.+ ..+++.... ..+..+.+...+.+++|+|||++|+
T Consensus 40 L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~P~GVv~~I~ 116 (464)
T 3k9d_A 40 VKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHV---YNYIKDMKTIGMLKEDNEKKVMEVAVPLGVVAGLI 116 (464)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHH---HHHHTTCCCSEEEEEETTTTEEEEEEECCEEEEEE
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHH---HHhhhcccccceeccCCCceeEEEEecceEEEEEC
Confidence 578999999999999999999999999875433444444433 333332211 1222234567788999999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHH----HHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEE
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFA----HLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVS 155 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~----~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~ 155 (414)
|||||+...++++++||++||+||+|||+.+|.++..++ +++.++|+|+|++|++++++.+.++.|+.||++|.|+
T Consensus 117 P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~~~~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~ 196 (464)
T 3k9d_A 117 PSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVIL 196 (464)
T ss_dssp CSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHHHHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEE
T ss_pred CCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEE
Confidence 999999999999999999999999999999999998755 5568999999999999998888999999999999999
Q ss_pred EeCCHHHHHHHHHHHhhCCCCceeeeCC-CCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHH
Q 015031 156 FTGSTDVGRQVMQAAATSNLKPVSLELG-GKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 234 (414)
Q Consensus 156 ~tGs~~~~~~i~~~~~~~~~~~~~~e~g-G~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~ 234 (414)
||||+.. .+.++ ++++|+ +|+| ||+|+||++|||++.|++.+++++|+|+||.|+++++||||+++||+|+++
T Consensus 197 fTGs~~v----~~~a~-~~~kpv-lelG~G~~p~iV~~dADl~~Aa~~i~~~~~~n~Gq~C~a~~rvlV~~~i~d~f~~~ 270 (464)
T 3k9d_A 197 ATGGSAM----VKAAY-SSGTPA-IGVGPGNGPAFIERSANIPRAVKHILDSKTFDNGTICASEQSVVVERVNKEAVIAE 270 (464)
T ss_dssp ECSCHHH----HHHHT-TSSSCE-EEBCCCCCEEEECTTSCHHHHHHHHHHHHTGGGGCSTTSCCEEEEEHHHHHHHHHH
T ss_pred EeCChHH----HHHHH-hcCCcE-EeeCCCCCeEEECCCCCHHHHHHHHHHHHhcCCCCCCCCCcEEEEeHHHHHHHHHH
Confidence 9999984 34444 788999 7777 999999999999999999999999999999999999999999999999999
Q ss_pred HHHHH-------hccccCCCC-CCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCC
Q 015031 235 LVEKA-------KAWVVGDPF-DPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDM 306 (414)
Q Consensus 235 l~~~~-------~~~~~g~~~-~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~ 306 (414)
|+++. +.+++|+|. ++++++||+++.++++++.++++.++.+|+++++||.. ++++++
T Consensus 271 l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~~~~~a~~~ga~vl~gg~~--------------~v~~~~ 336 (464)
T 3k9d_A 271 FRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLAGLTVPADARVLIAEET--------------KVGAKI 336 (464)
T ss_dssp HHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHHHTTCCCCTTCCEEEEECC--------------CCSTTC
T ss_pred HHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHHHHhhhhhcCCCEEEEcCCC--------------CCCCCC
Confidence 99986 456788887 77899999999999999999999999999999999863 456777
Q ss_pred cccccccccceEEEeeeCCHHHHH----HHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCC---------CC
Q 015031 307 LIAKNEIFGPVMALMKFKTVEEAI----KSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA---------FD 373 (414)
Q Consensus 307 ~~~~~E~fgPvl~v~~~~~~~eai----~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~---------~~ 373 (414)
++. +|+||||++|++|+|+|||| +++|+++|||+++|||+|.+.++++++++++|+|+||++.. ..
T Consensus 337 ~~~-~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~a~i~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~g~~~~~~ 415 (464)
T 3k9d_A 337 PYS-REKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIHSEDKEIIREFALKKPVSRLLVNTPGALGGIGATTNLV 415 (464)
T ss_dssp GGG-SCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHSSEEEEEESSCHHHHHTTSSSSSC
T ss_pred ccc-ccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEeCCHHHHHHHHHhCCEeEEEEECCccccccccCCCCC
Confidence 765 89999999999999999997 79999999999999999999999999999999999999864 46
Q ss_pred CCCCccCCCCCCCCCcchHHHHHhhhcccEEEEeCC
Q 015031 374 SDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIF 409 (414)
Q Consensus 374 ~~~pfgG~~~sG~g~~~g~~~~~~~~~~k~i~~~~~ 409 (414)
+.+|||| +.+|.|.++|..|+++|++.|+|.+..+
T Consensus 416 ~~~~~G~-G~~G~g~~~~~~~~~~~~~~k~v~~~~~ 450 (464)
T 3k9d_A 416 PALTLGC-GAVGGSSSSDNIGPENLFNIRRIATGVL 450 (464)
T ss_dssp CCSCBBC-TGGGTCSCCSBCCGGGSEEEEEEEECCC
T ss_pred ccccccC-cCCCCCcCCCCCCHHHheEEEEEEecCC
Confidence 8899998 7789999999999999999999988654
No 48
>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1
Probab=100.00 E-value=1.3e-75 Score=591.09 Aligned_cols=368 Identities=15% Similarity=0.165 Sum_probs=297.7
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCCh----HHHhhccHHH-HHHHHHHHHHhhhhhc------Cceecc---ccCcccc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLH----SWAKMGDIPG-AANTLRYYAGAADKIH------GEVLKM---SRALQGY 66 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~~~~~ev~~-~~~~l~~~~~~~~~~~------~~~~~~---~~~~~~~ 66 (414)
|+++++.|++|+++|++++++|+|||. .++...|+.. +++.++++++.+++.. +...+. +.+...+
T Consensus 42 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 121 (468)
T 1vlu_A 42 LYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQGIKDVAELEDPVGKVKMARELDDGLTLY 121 (468)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHHHHHHHHSCCSSSCEEEEEEEETTEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHHHHHHHHhhcCCCCCeecccccCCCCceeE
Confidence 578999999999999999999999998 6654578888 8888998888776654 333231 1244568
Q ss_pred ccccCCcEEEEEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHH----H----cCCCCCeEEEEcCCc
Q 015031 67 TLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK----L----AGVPDGVLNVVPGFG 138 (414)
Q Consensus 67 ~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~----~----aglp~g~v~~~~~~~ 138 (414)
..++|+|||++|+||| | ...++++++||++||+||+|||+.+|.++..+++++. + +|+|+|++|+++ ++
T Consensus 122 ~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aL~e~~~~aGlP~gvv~vv~-~~ 198 (468)
T 1vlu_A 122 QVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREMAKIVNDTIAQFQSETGVPVGSVQLIE-TR 198 (468)
T ss_dssp EEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHHHHHHHHHHHHHHHHCCCTTSEEECC-CC
T ss_pred EEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHHHHhhchhcCCCCCcEEEEC-CH
Confidence 8999999999999999 9 9999999999999999999999999999999999995 8 999999999999 66
Q ss_pred hhHHHHHHhCCCcCeEEEeCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccC
Q 015031 139 PTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVAS 218 (414)
Q Consensus 139 ~~~~~~l~~~~~~~~v~~tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~ 218 (414)
.++++.|..||++|.|.||||+.+|+.|.+.+ ++|+++|+|||||+||++|||++.|++.+++++|.|+| .|+++
T Consensus 199 ~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a----~kpv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~G-~C~a~ 273 (468)
T 1vlu_A 199 QDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT----KIPVLGHADGICSIYLDEDADLIKAKRISLDAKTNYPA-GCNAM 273 (468)
T ss_dssp --CGGGGGCTTTCCEEEEESCHHHHHHHHHTC----CSCBTTBCSCCEEEEECTTCCHHHHHHHHHHTTCC-----CCCC
T ss_pred HHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc----CCCEEeecCCccceEECCCCCHHHHHHHHHHHhcCCCC-cCCcC
Confidence 67899999999999999999999999998764 69999999999999999999999999999999999999 99999
Q ss_pred cEEEEeCccHHHHHHHHHHHHhcccc---CCCCCCCCCccccCCHHHHHHHHHH-HHHhhhcCCeEeeCCcccCCCCcee
Q 015031 219 SRVYVQEGIYDEFEKKLVEKAKAWVV---GDPFDPAVRQGPQVDKKQFDRILSY-IEHGKREGATLLTGGKPIGKKGYYI 294 (414)
Q Consensus 219 ~~v~V~~~~~~~f~~~l~~~~~~~~~---g~~~~~~~~~gpl~~~~~~~~~~~~-i~~a~~~ga~v~~gg~~~~~~g~~~ 294 (414)
++||||+++ |+|+++|+++++++++ |+|.+ +++ ++++. ++++||+ | +
T Consensus 274 ~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~-----------------~~~~i~~a~----~~~~gG~-----g--~ 324 (468)
T 1vlu_A 274 ETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL-----------------KTAYFDKLN----ELGKLTE-----A--I 324 (468)
T ss_dssp EEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH-----------------HHHHHHHHH----HHTCCCH-----H--H
T ss_pred cEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH-----------------hcccccccc----eeeccCC-----C--C
Confidence 999999999 9999999999999887 76532 344 55554 4677775 4 7
Q ss_pred eeEEEEeCCCCCcccccccccceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCC
Q 015031 295 EPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDS 374 (414)
Q Consensus 295 ~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~ 374 (414)
.||++ ++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||++....+
T Consensus 325 ~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~ 402 (468)
T 1vlu_A 325 QCKTV--DADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKANAEKFMKGVDSSGVYWNASTRFAD 402 (468)
T ss_dssp HTTBC---------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCHHHHHHHHHHCCCSEEEESSCGGGCC
T ss_pred CCcee--eCCCchhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHhCCeeEEEEcCCCCCCC
Confidence 89997 7889999999999999999999999999999999999999999999999999999999999999999877778
Q ss_pred CCCcc-----CCCCCCCCCcchHHHHHhhhcccEEEEeC
Q 015031 375 DCPYG-----GYKMSGFGRDCGLESLHNYLQVKSVVTPI 408 (414)
Q Consensus 375 ~~pfg-----G~~~sG~g~~~g~~~~~~~~~~k~i~~~~ 408 (414)
.+||| |+|.||+|++ |++|+++|++.|+|+.+.
T Consensus 403 ~~pfG~Gg~~G~~~SG~g~~-G~~gl~~f~~~K~v~~~~ 440 (468)
T 1vlu_A 403 GFRYGFGAEVGISTSKIHAR-GPVGLDGLVSYQYQIRGD 440 (468)
T ss_dssp -----------------------CCSGGGEEEEEEEECS
T ss_pred CCCCCCCCCcceecCCCCCC-cchHHHHhcceEEEEECC
Confidence 89999 9999999999 999999999999998764
No 49
>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.8e-73 Score=573.29 Aligned_cols=358 Identities=17% Similarity=0.176 Sum_probs=307.4
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHc-------CCChHH---HhhccHHHHHHHHHHHHHhhhhhcCceeccc---cCccccc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDA-------GKLHSW---AKMGDIPGAANTLRYYAGAADKIHGEVLKMS---RALQGYT 67 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~-------Gk~~~~---~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~ 67 (414)
|+++++.|++|+++|++++++|+ |||..+ ....|+..+++.+++++.++++..+...+.. .+...+.
T Consensus 57 L~~~a~~l~~~~~ela~~~~~e~g~~~~~~Gk~~~~rl~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~ 136 (463)
T 2h5g_A 57 IHHLADLLTDQRDEILLANKKDLEEAEGRLAAPLLKRLSLSTSKLNSLAIGLRQIAASSQDSVGRVLRRTRIAKNLELEQ 136 (463)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHTTTSCHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTSTTCEEEEEEEETTEEEEE
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhhcccccCCCchhhhhhhhHHHHHHHHHHHHHHHHhhHhhcCcccccccCCCCceeEE
Confidence 57899999999999999999999 699873 1247999999999999988877666543321 3445688
Q ss_pred cccCCcEEEEEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHc----CCCCCeEEEEcCCchhHHH
Q 015031 68 LREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLA----GVPDGVLNVVPGFGPTAGA 143 (414)
Q Consensus 68 ~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~a----glp~g~v~~~~~~~~~~~~ 143 (414)
.++|+|||++|+||| |.... +++++||++||+||+|||+.+|.++..+++++.++ | |+|++|++++ +.++++
T Consensus 137 ~~~P~GVv~~I~p~n-P~n~p-~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~G-P~gvv~vv~g-~~~~g~ 212 (463)
T 2h5g_A 137 VTVPIGVLLVIFESR-PDCLP-QVAALAIASGNGLLLKGGKEAAHSNRILHLLTQEALSIHG-VKEAVQLVNT-REEVED 212 (463)
T ss_dssp EEEECCEEEEEESSC-TTHHH-HHHHHHHHHTCEEEEECCGGGHHHHHHHHHHHHHHHHTTT-CGGGEEECCT-TCCC--
T ss_pred EEEcCceEEEEecCC-cHHHH-HHHHHHHHcCCEEEEECCCCcHHHHHHHHHHHHHHHHhcC-CCCeEEEEcC-CHHHHH
Confidence 999999999999887 88777 89999999999999999999999999999999999 9 9999999999 667899
Q ss_pred HHHhCCCcCeEEEeCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEE
Q 015031 144 AIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYV 223 (414)
Q Consensus 144 ~l~~~~~~~~v~~tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V 223 (414)
.|+.||++|.|.||||+.+|+.|.+.++ ++|+++|+|||||+||++|||++.|++.+++++|.| ||.|++++||||
T Consensus 213 ~L~~~p~vd~I~FTGS~~~G~~i~~~aa---l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~n-GQ~C~a~~rvlV 288 (463)
T 2h5g_A 213 LCRLDKMIDLIIPRGSSQLVRDIQKAAK---GIPVMGHSEGICHMYVDSEASVDKVTRLVRDSKCEY-PAACNALETLLI 288 (463)
T ss_dssp -----CCCSEEEEESCHHHHHHHHHHCS---SSCBCSCSCCCEEEEECTTCCTTTHHHHHHHHHHSC-TTSTTSEEEEEE
T ss_pred HHHhCCCcCEEEEECCHHHHHHHHHhcC---CCCEEEecCCcceEEEcCCCCHHHHHHHHHHHhccC-CCccccCcEEEE
Confidence 9999999999999999999999998864 899999999999999999999999999999999999 999999999999
Q ss_pred eCccHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCC
Q 015031 224 QEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVT 303 (414)
Q Consensus 224 ~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~ 303 (414)
|++++| ||+ +++++++++++|++++.|+... ..++|+ +
T Consensus 289 ~~~i~d-------------------------~p~--------~~~~i~~~~~~Ga~v~~G~~~~-~~g~~~--------~ 326 (463)
T 2h5g_A 289 HRDLLR-------------------------TPL--------FDQIIDMLRVEQVKIHAGPKFA-SYLTFS--------P 326 (463)
T ss_dssp EGGGTT-------------------------SHH--------HHHHHHHHHHTTCEEEECHHHH-C--------------
T ss_pred eccccc-------------------------hHH--------HHHHHHHHHhCCCEEEeCCccc-ccCccC--------C
Confidence 999998 233 2345777888999998554322 234443 5
Q ss_pred CCCcccccccccceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCC
Q 015031 304 EDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKM 383 (414)
Q Consensus 304 ~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~ 383 (414)
++|++++||+||||++|++|+|+||||+++|++++||++||||+|.+.++++++++++|+|+||++....+.+||||+|.
T Consensus 327 ~~~~i~~eE~FgPvl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~ 406 (463)
T 2h5g_A 327 SEVKSLRTEYGDLELCIEVVDNVQDAIDHIHKYGSSHTDVIVTEDENTAEFFLQHVDSACVFWNASTRFSDGYRFGLGAE 406 (463)
T ss_dssp ---CCSSCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGGCSTTTTTSSCC
T ss_pred CCchHHhccccCceEEEEEeCCHHHHHHHHHcCCCCceEEEEeCCHHHHHHHHHhCCeeEEEEeCCccCCCCCCCCCCcc
Confidence 78999999999999999999999999999999999999999999999999999999999999999877778899999999
Q ss_pred CCCC--Cc--chHHHHHhhhcccEEEEeC
Q 015031 384 SGFG--RD--CGLESLHNYLQVKSVVTPI 408 (414)
Q Consensus 384 sG~g--~~--~g~~~~~~~~~~k~i~~~~ 408 (414)
||+| ++ +|++|+++|++.|+|+.+.
T Consensus 407 SG~G~~r~~~~G~~gl~~ft~~K~v~~~~ 435 (463)
T 2h5g_A 407 VGISTSRIHARGPVGLEGLLTTKWLLRGK 435 (463)
T ss_dssp SCEECCSSSCCEECCGGGGEEEEEEEECS
T ss_pred CcCCCCcccCCCHHHHHHhceeEEEEECC
Confidence 9999 65 8999999999999998764
No 50
>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}
Probab=100.00 E-value=3.4e-72 Score=563.80 Aligned_cols=360 Identities=21% Similarity=0.229 Sum_probs=304.5
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChH----HHhh-------ccHHHHHHHHHHHHHhhhhhcCceecc---ccCcccc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHS----WAKM-------GDIPGAANTLRYYAGAADKIHGEVLKM---SRALQGY 66 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~----~~~~-------~ev~~~~~~l~~~~~~~~~~~~~~~~~---~~~~~~~ 66 (414)
|+++++.|++|+++|++++++|+||+.. ++.. .|+..+++.+++++.+++.. +...+. ..+...+
T Consensus 54 L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~~~~l~~~a~~~~~~-g~~~~~~~~~~~~~~~ 132 (444)
T 4ghk_A 54 LEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTMVEGLRQVATLPDPI-GEMSNLKYRPSGIQVG 132 (444)
T ss_dssp HHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHHHHHHHHHHHSCCCT-TCEEEEEECTTSCEEE
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHHHHHHHHHHhhcccc-CccCCcccCCCCccce
Confidence 5789999999999999999999999853 3221 47899999999999887643 333332 2355678
Q ss_pred ccccCCcEEEEEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHH----HHcCCCCCeEEEEcCCch-hH
Q 015031 67 TLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLA----KLAGVPDGVLNVVPGFGP-TA 141 (414)
Q Consensus 67 ~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~----~~aglp~g~v~~~~~~~~-~~ 141 (414)
++++|+|||++|+||| | ...++++++||++||+||+|||+.+|.++..+.+++ .++|+|+|++|+++|++. +.
T Consensus 133 ~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~~ 210 (444)
T 4ghk_A 133 QMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNTALAKLIGEGLAEAGLPQDTVQVVETADRAAV 210 (444)
T ss_dssp EEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEECCCCCTHHH
T ss_pred EEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHHHHHcCCCcccEEEEeCCCHHHH
Confidence 8999999999999998 8 588899999999999999999999999999999997 799999999999998654 57
Q ss_pred HHHHHhCCCcCeEEEeCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEE
Q 015031 142 GAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRV 221 (414)
Q Consensus 142 ~~~l~~~~~~~~v~~tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v 221 (414)
+..|..||++|.|.||||+.+++.+.+.+ ++|+++|+|||||+||++|||++.|++.+++++|.|+| .|++++||
T Consensus 211 ~~~L~~~p~vd~V~fTGs~~vg~~v~~~a----~~pv~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rv 285 (444)
T 4ghk_A 211 GRLITMTEYVDVIVPRGGKSLIERLINEA----RVPMIKHLDGICHVYVDDRASVTKALTVCDNAKTHRYG-TCNTMETL 285 (444)
T ss_dssp HHHTTCTTTCSEEEECSCHHHHHHHHHHC----CSCBCCCCCCCCEEEECTTCCHHHHHHHCC----------CCCCCEE
T ss_pred HHHHhcCCCccEEEEECcHHHHHHHHHhC----CCCEEEEcCCcCeEEECCCCCHHHHHHHHHHHhcCCCc-ccCcCceE
Confidence 88888899999999999999999998764 69999999999999999999999999999999999999 99999999
Q ss_pred EEeCccHHHHHHHHHHHHhcccc---CCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEE
Q 015031 222 YVQEGIYDEFEKKLVEKAKAWVV---GDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTI 298 (414)
Q Consensus 222 ~V~~~~~~~f~~~l~~~~~~~~~---g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptv 298 (414)
|||++++|+|+++|+++++++++ |+|. ..++++++. .| +
T Consensus 286 lV~~~i~d~f~~~l~~~~~~~~~~~~g~p~-----------------~~~~i~~a~---------------~G------~ 327 (444)
T 4ghk_A 286 LVARGIAPAVLSPLGRLYREKGVELRVDAD-----------------ARAVLEAAG---------------VG------P 327 (444)
T ss_dssp EEEGGGHHHHHHHHHHHHHHTTCEEEECHH-----------------HHHHHHHTT---------------CC------C
T ss_pred EEeHHHHHHHHHHHHHHHHHcCCeecCCHH-----------------HHHHHHhcc---------------cC------c
Confidence 99999999999999999999887 6542 135565542 11 1
Q ss_pred EEeCCCCCcccccccccceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCc
Q 015031 299 FTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPY 378 (414)
Q Consensus 299 l~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pf 378 (414)
+ ++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++..+.+..||
T Consensus 328 ~--~~~~~~~~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~pf 405 (444)
T 4ghk_A 328 L--VDATDEDWRTEYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAIVTEDHDRAMRFLREVDSASVMVNASTRFADGFEF 405 (444)
T ss_dssp C--EECCSGGGTCC---CEEEEEEESSHHHHHHHHHHHSCSSEEEEECSBHHHHHHHHHHCCSSEEEEEECGGGCSTTTT
T ss_pred c--cCCCchhhhccccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHhCCcceEEEcCCCccCCCCCc
Confidence 1 34678999999999999999999999999999999999999999999999999999999999999998877788999
Q ss_pred cCCCCCCCC----CcchHHHHHhhhcccEEEEeC
Q 015031 379 GGYKMSGFG----RDCGLESLHNYLQVKSVVTPI 408 (414)
Q Consensus 379 gG~~~sG~g----~~~g~~~~~~~~~~k~i~~~~ 408 (414)
||.+.||+| +++|++|+++||++|+|+++.
T Consensus 406 Gg~~~sG~g~~~~~~~G~~gl~~~t~~K~v~~~~ 439 (444)
T 4ghk_A 406 GLGAEIGISNDKLHARGPVGLEGLTSLKYVVLGH 439 (444)
T ss_dssp TCSCCSEEECCSSSCCEEECGGGGEEEEEEEEEE
T ss_pred CCcccccccCCcccCCChhHHHhhceEEEEEECC
Confidence 999999998 578999999999999998764
No 51
>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1
Probab=100.00 E-value=3.1e-72 Score=561.36 Aligned_cols=359 Identities=19% Similarity=0.221 Sum_probs=315.4
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCCh----HHHh-------hccHHHHHHHHHHHHHhhhhhcCceecc---ccCcccc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLH----SWAK-------MGDIPGAANTLRYYAGAADKIHGEVLKM---SRALQGY 66 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~~~-------~~ev~~~~~~l~~~~~~~~~~~~~~~~~---~~~~~~~ 66 (414)
|+++++.|++|+++|++++++|+||+. .++. ..|+..+++.+++++.++++ .+...+. +.+...+
T Consensus 42 L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~~~~~l~~~a~~~~~-~g~~~~~~~~~~~~~~~ 120 (427)
T 1o20_A 42 IKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMIKACETVIGLKDP-VGEVIDSWVREDGLRIA 120 (427)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHHHHHHHHHHSCCC-TTCEEEEEECTTSCEEE
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHHHHHHHHHHHhcccc-cCccccccccCCCceeE
Confidence 578999999999999999999999885 3432 25899999999999988765 3443332 1244567
Q ss_pred ccccCCcEEEEEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHH----HcCCCCCeEEEEcCC-chhH
Q 015031 67 TLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK----LAGVPDGVLNVVPGF-GPTA 141 (414)
Q Consensus 67 ~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~----~aglp~g~v~~~~~~-~~~~ 141 (414)
.+++|+|||++|+||| +...++++++||++||+||+|||+.+|+++..+++++. ++|+|+|++|++++. ..+.
T Consensus 121 ~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~~~l~~l~~~al~eaGlP~gvv~vv~g~~~~~~ 198 (427)
T 1o20_A 121 RVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSNKAIVSAIREALKETEIPESSVEFIENTDRSLV 198 (427)
T ss_dssp EEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHHTTSSSCGGGEEECCCCCTHHH
T ss_pred EEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHHHHHHHHHHHHHHHcCCCcccEEEecCCChHHH
Confidence 8999999999999875 47888999999999999999999999999999999997 689999999999984 4567
Q ss_pred HHHHHhCCCcCeEEEeCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEE
Q 015031 142 GAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRV 221 (414)
Q Consensus 142 ~~~l~~~~~~~~v~~tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v 221 (414)
++.|..||++|.|.||||+.+|+.|.+.+ .+|+++|+|||||+||++|||++.|++.+++++|.|+| .|++++||
T Consensus 199 ~~~L~~~~~v~~I~fTGS~~~G~~i~~~a----~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~f~n~G-~C~a~~rv 273 (427)
T 1o20_A 199 LEMIRLREYLSLVIPRGGYGLISFVRDNA----TVPVLETGVGNCHIFVDESADLKKAVPVIINAKTQRPG-TCNAAEKL 273 (427)
T ss_dssp HHHTTCTTTCSEEEECSCHHHHHHHHHHC----SSCBCCCCCCCEEEEECTTSCHHHHHHHHHHHHHSCTT-STTSEEEE
T ss_pred HHHHhCCCCccEEEeCCChHHHHHHHHhc----CCCEEEecCCCceEEEeCCCCHHHHHHHHHHHhccCCC-CCCCccEE
Confidence 88899999999999999999999998875 59999999999999999999999999999999999999 99999999
Q ss_pred EEeCccHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEe
Q 015031 222 YVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTN 301 (414)
Q Consensus 222 ~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~ 301 (414)
|||+++||+|+++|++++++++++ +.||... .+ |+ |||
T Consensus 274 ~V~~~i~d~f~~~l~~~~~~~~~~-----------------------------------~~gg~~~--~~-~~-Ptl--- 311 (427)
T 1o20_A 274 LVHEKIAKEFLPVIVEELRKHGVE-----------------------------------VRGCEKT--RE-IV-PDV--- 311 (427)
T ss_dssp EEEHHHHHHHHHHHHHHHHHTTCE-----------------------------------EEECHHH--HH-HS-TTS---
T ss_pred EEehhhHHHHHHHHHHHHHHcCCe-----------------------------------eecChhh--hh-hC-Ccc---
Confidence 999999999999999999987652 1122211 12 33 885
Q ss_pred CCCCCcccccccccceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCC
Q 015031 302 VTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGY 381 (414)
Q Consensus 302 ~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~ 381 (414)
++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||.
T Consensus 312 ~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGg~ 391 (427)
T 1o20_A 312 VPATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNASTRFTDGGQFGFG 391 (427)
T ss_dssp EECCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGGCSTTTTTCS
T ss_pred cCCCcchhhcccccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCCHHHHHHHHHhCCccEEEECCCCccCCCCCCCCc
Confidence 24578899999999999999999999999999999999999999999999999999999999999998777788999999
Q ss_pred CCCCCC----CcchHHHHHhhhcccEEEEeCC
Q 015031 382 KMSGFG----RDCGLESLHNYLQVKSVVTPIF 409 (414)
Q Consensus 382 ~~sG~g----~~~g~~~~~~~~~~k~i~~~~~ 409 (414)
|.||+| +++|++|+++|+++|+|+.+++
T Consensus 392 ~~SG~g~~~~~~~g~~gl~~~~~~k~v~~~~~ 423 (427)
T 1o20_A 392 AEIGISTQRFHARGPVGLRELTTYKFVVLGEY 423 (427)
T ss_dssp CCSCEECSSSSCCEECCTGGGEEEEEEEECSS
T ss_pred ccccccCCcccCCChHHHHHHhceEEEEECCC
Confidence 999997 4679999999999999988754
No 52
>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}
Probab=100.00 E-value=7.5e-71 Score=555.58 Aligned_cols=383 Identities=19% Similarity=0.232 Sum_probs=312.2
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHH-HHHHHhhhhhcCceeccccCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTL-RYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+||+..++...|+..+.+.+ ++++. .+. ...++.+.+...+..++|+|||++|+
T Consensus 35 l~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~~~~~~--~~~-~g~~~~~~~~~~~~~~~P~GVv~~I~ 111 (452)
T 3my7_A 35 FRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYNKYKD--EQT-CGILEEDDNLGTMTIAEPVGIICGIV 111 (452)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHTT--CCC-SEEC-------CEEEEEECCEEEEEE
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhhh--ccc-cccccCCCCCceEEEecCceEEEEEc
Confidence 578999999999999999999999999986545666666666 33322 111 11222234456788999999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHH----HcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEE
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK----LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVS 155 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~----~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~ 155 (414)
|||||+...++++++||++||+||+|||+.+|.++..+++++. ++|+|+|++|++++++.+.++.|+.||+++.|.
T Consensus 112 P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~a~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~ 191 (452)
T 3my7_A 112 PTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALIL 191 (452)
T ss_dssp CTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHHHHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEE
T ss_pred CCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHHHHHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEE
Confidence 9999999999999999999999999999999999988887765 799999999999998889999999999999999
Q ss_pred EeCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHH
Q 015031 156 FTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 235 (414)
Q Consensus 156 ~tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l 235 (414)
||||+..++ .++ ++++|+++|+|||+|+||++|||++.|++.+++++|+|+||.|+++++||||+++||+|+++|
T Consensus 192 fTGs~~~~~----~a~-~~~kp~~~e~gG~~p~iV~~dADl~~Aa~~iv~s~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l 266 (452)
T 3my7_A 192 ATGGPGMVK----AAY-SSGKPAIGVGAGNVPVVIDETADIKRAVASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERF 266 (452)
T ss_dssp ECSCHHHHH----HHH-TSSSCEEECC--CEEEEECTTSCHHHHHHHHHHGGGGGGGCCTTCEEEEEEEGGGHHHHHHHH
T ss_pred EECcHHHHH----HHH-hcCCCEEecCCCCCeEEEeCCCCHHHHHHHHHHHHhCCCCCccCCCcEEEEcHHHHHHHHHHH
Confidence 999998544 333 788999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCccc---CCCCceeeeEE-------EEeCCCC
Q 015031 236 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI---GKKGYYIEPTI-------FTNVTED 305 (414)
Q Consensus 236 ~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~---~~~g~~~~Ptv-------l~~~~~~ 305 (414)
+++ .||+++++++++++++++++...|+++ +||... ...|+|++||+ +.+++++
T Consensus 267 ~~~---------------~gpli~~~~~~~v~~~i~~~~~~~a~v-~G~~~~~~~~~~G~~v~pt~~vl~~~~~~~v~~~ 330 (452)
T 3my7_A 267 ASH---------------KAHVLSKTDADKVRKVLLIDGALNAKI-VGQPATAIAEMAGVKVPADTKVLIGEGLGKVSYD 330 (452)
T ss_dssp HTT---------------TEEECCHHHHHHHHHHHEETTEECGGG-TTCCHHHHHHHHTCCCCTTCCEEEEECSSSCCTT
T ss_pred HHh---------------CCCcCCHHHHHHHHHHHHhhcccCCeE-ecCccchhHHhCCceeCCCeeEEeeccccCCCCc
Confidence 864 389999999999999998877777776 476542 13689999997 5578889
Q ss_pred CcccccccccceEEEeeeCCHHHHHHHHhcCC----CCceEEEecCCHHHHHH---HHhccceeEEEECCcCCCC-----
Q 015031 306 MLIAKNEIFGPVMALMKFKTVEEAIKSANNTR----YGLAAGIMTKDLNVANT---VSRSIRAGIIWINCYFAFD----- 373 (414)
Q Consensus 306 ~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~----~gl~~sv~s~d~~~~~~---~~~~l~~g~v~vN~~~~~~----- 373 (414)
+++.+ |+||||++|++|+|+||||+++|++. +||+++|||+|.+.+++ +++++++|+|+||++..+.
T Consensus 331 ~~~~~-E~FgPVl~v~~~~~~~eAi~~an~~~~~~g~Glta~i~t~d~~~a~~i~~~a~~l~~G~V~VN~~~~~Gg~G~~ 409 (452)
T 3my7_A 331 DAFAH-EKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLYTNQDVNADRIRYFGDKMKTARILINIPTTHGGIGDL 409 (452)
T ss_dssp CGGGS-CCSSSEEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEESCTTTCHHHHHHHHHHCCCSEEEESCCCC-------
T ss_pred chhhc-CccCcEEEEEEeCCHHHHHHHHHhcccccCCCCEEEEEcCCHHHHHHHHHHHHhCCEEEEEECCCCCCcccccc
Confidence 99875 89999999999999999999999974 99999999999887777 9999999999999976421
Q ss_pred ------CCCCccCCCCCCCCCcchHHHHHhhhcccEEEEeCC
Q 015031 374 ------SDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIF 409 (414)
Q Consensus 374 ------~~~pfgG~~~sG~g~~~g~~~~~~~~~~k~i~~~~~ 409 (414)
+.+.+ |++..|.+..++.-+.+++++.|+|.++..
T Consensus 410 ~~f~~~~~~t~-g~g~~Gg~~~~~nv~~~~l~n~~~v~~~~~ 450 (452)
T 3my7_A 410 YNFNVAPSLTL-GCGSWGGNSISENVGPKHLINKKTVAKRAE 450 (452)
T ss_dssp ----------------------CCCCCGGGGEEEEEEECCC-
T ss_pred cccCcCceEee-eccccCCCccCCCCChhHeeeeeEEEeecC
Confidence 11111 444445555666778899999999877643
No 53
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=97.71 E-value=0.014 Score=56.29 Aligned_cols=262 Identities=19% Similarity=0.196 Sum_probs=148.4
Q ss_pred ccCccccccccCCcEEEEEcCCC---cChHhhHHHHHHHHhcCCeE-E-EecCCCChhHHHHHHHHHHHcCCCCCeEEEE
Q 015031 60 SRALQGYTLREPIGVVGHIIPWN---FPTTMFFMKVSPALAAGCTM-I-VKPAEQTPLIALYFAHLAKLAGVPDGVLNVV 134 (414)
Q Consensus 60 ~~~~~~~~~~~P~Gvv~~i~p~n---~P~~~~~~~~~~ALaaGN~v-v-~kps~~~~~~~~~l~~~~~~aglp~g~v~~~ 134 (414)
..|.....++.|+--|++..|.- ||-..+| ..+||-.||..= | ..|++. -.....+.-+...+|..+ +.
T Consensus 118 ~~G~~~g~~~~Pi~~VGlYVPGG~A~ypSsvLM-~aiPAkVAGV~~Iv~~tPp~~-G~i~p~iL~AA~l~Gv~e----Iy 191 (423)
T 4gic_A 118 ADGTLLGQKITPLDRVGLYVPGGKAAYPSSVLM-NAVPAKVAGVPELIMAVPAPR-GELNALVLAAAYISGVDR----VF 191 (423)
T ss_dssp TTSCEEEEEEEECSEEEEECCCSTTCCHHHHHH-HHHHHHHHTCSEEEEECCCGG-GCCCHHHHHHHHHHTCCE----EE
T ss_pred CCCCEEEEEEEEecceeEEeeCCCCchhhHHHH-hhccHHHhCCCeEEEecCCCC-CCccHHHHHHHHhcCCcE----EE
Confidence 35666778889999999999954 6654444 578999999873 3 344332 122233444455667653 33
Q ss_pred cCCchhHHHHHHh----CCCcCeEEEeCCHHHHHHHHHHHhhCCCCceeeeCCCCCceee-cCCCCHHHHHHHHHHHHhc
Q 015031 135 PGFGPTAGAAIAS----HMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLI-FDDVDVNTAADMALLGILF 209 (414)
Q Consensus 135 ~~~~~~~~~~l~~----~~~~~~v~~tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV-~~dadl~~a~~~i~~~~~~ 209 (414)
.-.|.....+|.- -|.+|.|+=.|..-++.+ ++.. ....-+=+..|-.--+|| ++++|.+..+.+++.-+=+
T Consensus 192 ~vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~A--Kr~v-~g~VgIDm~AGPSEilViAD~~a~p~~vAaDLlsQAEH 268 (423)
T 4gic_A 192 RIGGAQAVAALAYGTETVPRVDKIVGPGNIYVATA--KKLV-FGQVGIDMVAGPSEILVISDGRTDPDWIAMDLFSQAEH 268 (423)
T ss_dssp CCCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHH--HHHH-BTTBEECCCCCCCEEEEEECSCSCHHHHHHHHHHHHTT
T ss_pred EcCChhhhhhhccCCCcccceeEEecCCcHHHHHH--HHHh-cCCcCcccccccceEEEEeCCCCCHHHHHHHHHHhhcc
Confidence 2224444444443 578999999999876542 2222 111111122222222333 5568999999988876654
Q ss_pred ccCCccccCcEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCC
Q 015031 210 NKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK 289 (414)
Q Consensus 210 ~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~ 289 (414)
... .+.++|..+ .+|.+++.+.+.+..-.-| .. +. +..+..+
T Consensus 269 d~~-----a~~iLvT~s--~~la~~V~~~i~~~l~~l~-----------r~---~i----~~~sl~~------------- 310 (423)
T 4gic_A 269 DED-----AQAILISPD--AAHLEAVQASIERLLPGME-----------RA---EV----IRTSLER------------- 310 (423)
T ss_dssp CTT-----CEEEEEESC--HHHHHHHHHHHHHHGGGCT-----------TH---HH----HHHHHHH-------------
T ss_pred CCC-----CeEEEEeCc--HHHHHHHHHHHHHHHhhCc-----------cH---HH----HHHHHhc-------------
Confidence 433 334666655 3455555444443210001 11 11 1112110
Q ss_pred CCceeeeEEEEeCCCCCcccccccccceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccc-eeEEEECC
Q 015031 290 KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR-AGIIWINC 368 (414)
Q Consensus 290 ~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~-~g~v~vN~ 368 (414)
+| .++.++|++||++++|..- .=..-|.++|+. .+..+++ +|.|++..
T Consensus 311 ------------------------~g---~ii~v~~~~ea~~~~N~~A-PEHLel~~~~~~---~~l~~i~nAGaIFlG~ 359 (423)
T 4gic_A 311 ------------------------RG---GMILVDDLEQAAAVANRIA-PEHLELSVESPE---VLVESIRNAGAIFMGR 359 (423)
T ss_dssp ------------------------HC---EEEECSSHHHHHHHHHHHC-CSEEEEESSCHH---HHGGGCCCCSEEEEC-
T ss_pred ------------------------Cc---eEEEEeehHHHHHHHHhhC-hHHhhhhhCCHH---HHHhhCcEeceeecCC
Confidence 11 3456799999999999842 235678888864 5777776 89999987
Q ss_pred cCC---------CCCCCCccCCCCCCCCCcchHHHHHhhhcccEE
Q 015031 369 YFA---------FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 404 (414)
Q Consensus 369 ~~~---------~~~~~pfgG~~~sG~g~~~g~~~~~~~~~~k~i 404 (414)
++. .++-+|-+ |..++.+.-+...|+++.++
T Consensus 360 ~tp~~~GDY~aG~NHvLPT~-----G~Ar~~sgLsv~~F~K~~s~ 399 (423)
T 4gic_A 360 YTAEALGDYCAGPNHVLPTS-----GTARFSSPLGVYDFQKRSSL 399 (423)
T ss_dssp ---------------CCCCT-----TGGGTCCCCCGGGGEEEEEE
T ss_pred CCchhhhhcCcCCCccCCCC-----CcccccCCCCHHHeeeeeeE
Confidence 543 12445554 45566666678888887665
No 54
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=97.60 E-value=0.031 Score=54.08 Aligned_cols=259 Identities=19% Similarity=0.200 Sum_probs=150.2
Q ss_pred cCccccccccCCcEEEEEcCC---CcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCC
Q 015031 61 RALQGYTLREPIGVVGHIIPW---NFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGF 137 (414)
Q Consensus 61 ~~~~~~~~~~P~Gvv~~i~p~---n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~ 137 (414)
.|.....++.|+--|++..|. -||-..+| ..+||-.+|..=|+-.+|- .....+.-....+|..+ +..-.
T Consensus 113 ~Gv~~gq~~~Pi~rvGlYVPGG~a~ypSsvLM-~aiPAkVAGV~~Iv~~tPp--~i~p~iL~AA~l~Gv~e----Iy~vG 185 (434)
T 1kae_A 113 PGVRCQQVTRPVASVGLYIPGGSAPLFSTVLM-LATPASIAGCKKVVLCSPP--PIADEILYAAQLCGVQD----VFNVG 185 (434)
T ss_dssp TTEEEEEEEEECSEEEEECCCSSSCCTHHHHH-HHHHHHHHTCSEEEEEECS--SCCHHHHHHHHHTTCCE----EEECC
T ss_pred CCcEEEEEEeehheEEEEecCCCCCchhHHHH-hhccHhhcCCCeEEEECCC--CCCHHHHHHHHHcCCCE----Eeecc
Confidence 355666788999999999997 46654444 5789999998765433331 12223344455666653 22222
Q ss_pred chhHHHHHH----hCCCcCeEEEeCCHHHHHHHHHHHhhCCCCceeee-CCCCCce--eecCCCCHHHHHHHHHHHHhcc
Q 015031 138 GPTAGAAIA----SHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLE-LGGKSPL--LIFDDVDVNTAADMALLGILFN 210 (414)
Q Consensus 138 ~~~~~~~l~----~~~~~~~v~~tGs~~~~~~i~~~~~~~~~~~~~~e-~gG~~~~--iV~~dadl~~a~~~i~~~~~~~ 210 (414)
|.....+|. +-|.+|.|+=.|..-+...=..... ..+. |-.. ..|.+=+ |-+++||.+..+.+++.-+=+.
T Consensus 186 GAQAIAAlAyGTetIp~VDkI~GPGN~yVa~AKr~Vs~-~~G~-VgIDm~AGPSEilViAD~tAnp~~vAaDLLsQAEHd 263 (434)
T 1kae_A 186 GAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQ-RLDG-AAIDMPAGPSEVLVIADSGATPDFVASDLLSQAEHG 263 (434)
T ss_dssp HHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHHH-CTTS-CEESCCCCCCEEEEEECTTSCHHHHHHHHHHHHTTC
T ss_pred cHHHHHHHHcCCCCCCCccEEECCCcHHHHHHHHHhHh-hcCc-cccCCCCCCceEEEEeCCCCCHHHHHHHHHHHhccC
Confidence 433333333 2478999999888765442211110 1111 2111 1333333 3356789999998888665444
Q ss_pred cCCccccCcEEEEeCc--cHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccC
Q 015031 211 KGEICVASSRVYVQEG--IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG 288 (414)
Q Consensus 211 ~Gq~C~a~~~v~V~~~--~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~ 288 (414)
.. .+.++|..+ ..++..+.+.+++..+. . . +.++.+.
T Consensus 264 ~~-----a~aiLvT~s~~la~~V~~ev~~ql~~lp---------------r---~----~ia~~sl-------------- 302 (434)
T 1kae_A 264 PD-----SQVILLTPAADMARRVAEAVERQLAELP---------------R---A----ETARQAL-------------- 302 (434)
T ss_dssp TT-----CEEEEEESCHHHHHHHHHHHHHHHTTCT---------------T---H----HHHHHHH--------------
T ss_pred CC-----CcEEEEECCHHHHHHHHHHHHHHHHhCC---------------h---H----HHHHHHH--------------
Confidence 32 334566555 23444444444444321 1 1 1111111
Q ss_pred CCCceeeeEEEEeCCCCCcccccccccceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccc-eeEEEEC
Q 015031 289 KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR-AGIIWIN 367 (414)
Q Consensus 289 ~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~-~g~v~vN 367 (414)
..- .++.++|++||++++|..- .=..-|.++|+ ..++.+++ +|.|++.
T Consensus 303 --------------------------~~~-~ii~v~~l~ea~~~~N~~A-PEHLel~~~dp---~~~l~~I~nAGaIFlG 351 (434)
T 1kae_A 303 --------------------------NAS-RLIVTKDLAQCVEISNQYG-PEHLIIQTRNA---RELVDSITSAGSVFLG 351 (434)
T ss_dssp --------------------------TTC-EEEECSSHHHHHHHHHHHC-CSEEEEESTTH---HHHGGGCCSCSEEEES
T ss_pred --------------------------HcC-eEEEECCHHHHHHHHHHhh-hHhhhhhhcCH---HHHHhhcCcccchhcC
Confidence 112 4567899999999999742 23567888886 45777776 8999999
Q ss_pred CcCC---------CCCCCCccCCCCCCCCCcchHHHHHhhhcccEEE
Q 015031 368 CYFA---------FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 405 (414)
Q Consensus 368 ~~~~---------~~~~~pfgG~~~sG~g~~~g~~~~~~~~~~k~i~ 405 (414)
.++. .++-+|-+| ..++.+.-+...|+++.++.
T Consensus 352 ~~tpe~~GDY~aG~NHvLPT~G-----~AR~~sgLsV~~F~K~~s~~ 393 (434)
T 1kae_A 352 DWSPESAGDYASGTNHVLPTYG-----YTATCSSLGLADFQKRMTVQ 393 (434)
T ss_dssp TTCCHHHHHHTSSSCCCCCCTT-----GGGTCCCSCGGGGEEEEEEE
T ss_pred CCCchhhcccccCCCcccCCCC-----ceeccCCCcHHhccceeeEE
Confidence 7643 345666654 45555666778888876653
No 55
>1s7i_A Hypothetical protein PA1349; structural genomics, protein structure initiative, pseudomon aeruginosa, MCSG, PSI; 1.80A {Pseudomonas aeruginosa} SCOP: d.58.4.9
Probab=65.41 E-value=24 Score=27.81 Aligned_cols=73 Identities=12% Similarity=0.205 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHhhhcCCeEeeCCcc-cCCCCcee-----eeEEEEeCCCCCcccccccccceEEEeeeCCHHHHHHHHh
Q 015031 261 KQFDRILSYIEHGKREGATLLTGGKP-IGKKGYYI-----EPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSAN 334 (414)
Q Consensus 261 ~~~~~~~~~i~~a~~~ga~v~~gg~~-~~~~g~~~-----~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n 334 (414)
+..+...+++++..+.| .++.|+.. +...+..+ .|+|..+.-.+ .+|..|= +.|+.++|.|+|++++.
T Consensus 30 ~~~~~~~~~~~~l~~~G-~lv~g~~L~~~~~a~~Vr~~~g~~~VtdGPfaE----tkE~lgG-~~iie~~s~deA~e~A~ 103 (124)
T 1s7i_A 30 AIVDECMTYSDQLGKAG-HYIASHALQSVQTATTLRHQGGRLAMTDGPFAE----TKEQLGG-FYLIEARDLNQALQIAA 103 (124)
T ss_dssp HHHHHHHHHHHHHHHHT-CEEEEEECCCGGGCEEEEECSSCEEEEESCSSC----CSSEEEE-EEEEEESSHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHCC-EEEecCcCCCCcceEEEEecCCceeEecCCCcC----Cccccee-EEEEEeCCHHHHHHHHH
Confidence 34455556666666666 33333221 11122222 23444332222 4566664 57779999999999999
Q ss_pred cCCCC
Q 015031 335 NTRYG 339 (414)
Q Consensus 335 ~~~~g 339 (414)
..+..
T Consensus 104 ~~P~~ 108 (124)
T 1s7i_A 104 KIPPG 108 (124)
T ss_dssp TCGGG
T ss_pred hCCcc
Confidence 87754
No 56
>3v42_A Folliculin; tumor suppressor, protein binding; 2.00A {Homo sapiens}
Probab=55.25 E-value=12 Score=32.88 Aligned_cols=65 Identities=11% Similarity=0.140 Sum_probs=46.3
Q ss_pred HHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCCHH
Q 015031 89 FMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTD 161 (414)
Q Consensus 89 ~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs~~ 161 (414)
+..++..+.+||-||++.+. +.....+..+|... +|.+.+.+++.+ ++- ...-..+.+.++.+..
T Consensus 21 F~~l~~~vl~GnQiIVrg~~--~~~~~s~~~~L~~l-LP~~c~~l~~~s-~~Y----~~~~~cnilgls~~v~ 85 (226)
T 3v42_A 21 FRMLAWHVLMGNQVIWKSRD--VDLVQSAFEVLRTM-LPVGCVRIIPYS-SQY----EEAYRCNFLGLSPHVQ 85 (226)
T ss_dssp HHHHHHHHHHTCEEEEECSC--HHHHHHHHHHHGGG-SCGGGCCEEEEE-SSC----CCTTTCSEEEECTTCC
T ss_pred HHHHHHHHhcCCEEEEEcCC--HHHHHHHHHHHHHh-CCHHHHhccccc-hhh----cchhheeeecCCCCcc
Confidence 34577788899999999987 66677778888888 999999998652 121 1223356666666544
No 57
>2fiu_A Conserved hypothetical protein; alpha-beta, dimeric alpha-beta barrels, structural genomics, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.58.4.16
Probab=54.96 E-value=29 Score=26.06 Aligned_cols=22 Identities=27% Similarity=0.495 Sum_probs=18.7
Q ss_pred eEEEeeeCCHHHHHHHHhcCCC
Q 015031 317 VMALMKFKTVEEAIKSANNTRY 338 (414)
Q Consensus 317 vl~v~~~~~~~eai~~~n~~~~ 338 (414)
-+.|+.|+|.+.|.++.|+-+|
T Consensus 55 ~~viieFpS~~aa~~~~~s~~Y 76 (99)
T 2fiu_A 55 RNVVIEFPSVQHAIDCYNSPEY 76 (99)
T ss_dssp EEEEEEESSHHHHHHHHHSHHH
T ss_pred eEEEEECCCHHHHHHHHcCHHH
Confidence 6789999999999999986443
No 58
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=54.23 E-value=26 Score=28.75 Aligned_cols=114 Identities=18% Similarity=0.123 Sum_probs=69.5
Q ss_pred cEEEEEcCCC-cChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHH-cCCCCCeEEEEcC-CchhHHHHHHhCC
Q 015031 73 GVVGHIIPWN-FPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKL-AGVPDGVLNVVPG-FGPTAGAAIASHM 149 (414)
Q Consensus 73 Gvv~~i~p~n-~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~-aglp~g~v~~~~~-~~~~~~~~l~~~~ 149 (414)
|-|+++...+ =+-...+.+-...+.+|..++- +.-|+. .|.+ .|+|...++-++. .++.+++.+ .+.
T Consensus 12 g~V~lsv~D~dK~~~v~~ak~~~~ll~Gf~l~A-----T~gTa~----~L~e~~Gl~v~~v~k~~eGG~p~I~d~I-~~g 81 (152)
T 1b93_A 12 KHIALVAHDHCKQMLMSWVERHQPLLEQHVLYA-----TGTTGN----LISRATGMNVNAMLSGPMGGDQQVGALI-SEG 81 (152)
T ss_dssp CEEEEEECGGGHHHHHHHHHHTHHHHTTSEEEE-----ETTHHH----HHHHHHCCCCEEECCGGGTHHHHHHHHH-HTT
T ss_pred CEEEEEEehhhHHHHHHHHHHHHHHhCCCEEEE-----ccHHHH----HHHHHhCceeEEEEecCCCCCchHHHHH-HCC
Confidence 5455444433 3444444455566667887664 234443 4445 7999766654432 133445444 556
Q ss_pred CcCeEEEeCC-------HHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccC
Q 015031 150 DIDKVSFTGS-------TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKG 212 (414)
Q Consensus 150 ~~~~v~~tGs-------~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~G 212 (414)
.+|+|+||-+ ...+..|.+.|. ....|+..-+ ..++.++.+..++..
T Consensus 82 eIdlVInt~~pl~~~~h~~D~~~IrR~A~-~~~IP~~T~l---------------atA~a~v~ai~~~~~ 135 (152)
T 1b93_A 82 KIDVLIFFWDPLNAVPHDPDVKALLRLAT-VWNIPVATNV---------------ATADFIIQSPHFNDA 135 (152)
T ss_dssp CCCEEEEECCTTSCCTTHHHHHHHHHHHH-HTTCCEESSH---------------HHHHHHHTSGGGGSC
T ss_pred CccEEEEcCCcccCCcccccHHHHHHHHH-HcCCCEEeCH---------------HHHHHHHHHHhcccc
Confidence 7999999876 567888888887 6667766543 456667777666654
No 59
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=41.51 E-value=35 Score=27.46 Aligned_cols=63 Identities=13% Similarity=0.036 Sum_probs=43.2
Q ss_pred HHHHHHcCCCCCeEEEEcCC-c----hhHHHHHHhCCCcCeEEEeCCH-----HHHHHHHHHHhhCCCCceeeeC
Q 015031 118 AHLAKLAGVPDGVLNVVPGF-G----PTAGAAIASHMDIDKVSFTGST-----DVGRQVMQAAATSNLKPVSLEL 182 (414)
Q Consensus 118 ~~~~~~aglp~g~v~~~~~~-~----~~~~~~l~~~~~~~~v~~tGs~-----~~~~~i~~~~~~~~~~~~~~e~ 182 (414)
++.|++.|+|...++-++.. . +.+.+.+ .+..+++|++|-+. ..+..|++.+. ....|++...
T Consensus 60 a~~L~~~Gi~v~~v~k~~egg~~~~~~~i~d~i-~~g~i~lVInt~~~~~~~~~d~~~iRR~Av-~~~IP~~T~~ 132 (143)
T 2yvq_A 60 SDWLNANNVPATPVAWPSQEGQNPSLSSIRKLI-RDGSIDLVINLPNNNTKFVHDNYVIRRTAV-DSGIPLLTNF 132 (143)
T ss_dssp HHHHHHTTCCCEEECCGGGC-----CBCHHHHH-HTTSCCEEEECCCCCGGGHHHHHHHHHHHH-HTTCCEECSH
T ss_pred HHHHHHcCCeEEEEEeccCCCcccccccHHHHH-HCCCceEEEECCCCCCcCCccHHHHHHHHH-HhCCCeEcCH
Confidence 44557899998777766542 2 4455555 45679999998655 47778888877 6777877653
No 60
>1b4b_A Arginine repressor; core, oligomerization domain, helix TUR; HET: ARG; 2.20A {Geobacillus stearothermophilus} SCOP: d.74.2.1
Probab=34.59 E-value=56 Score=22.80 Aligned_cols=56 Identities=9% Similarity=0.111 Sum_probs=40.2
Q ss_pred cCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCCHHHHHHHHHHH
Q 015031 98 AGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 170 (414)
Q Consensus 98 aGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs~~~~~~i~~~~ 170 (414)
++|-+|+|..|-. +..++.++.+.++|+ ++..+.|++. .++..=+.+.++.+.+..
T Consensus 12 ~~n~vVikT~pG~---A~~va~~iD~~~~~e-I~GTIAGDDT-------------Ilvi~r~~~~a~~l~~~i 67 (71)
T 1b4b_A 12 TGNLLVLRTLPGN---AHAIGVLLDNLDWDE-IVGTICGDDT-------------CLIICRTPKDAKKVSNQL 67 (71)
T ss_dssp ETTEEEEEESTTC---HHHHHHHHHHHCCTT-EEEEEECSSE-------------EEEEESSHHHHHHHHHHH
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEeeCCE-------------EEEEECCHHHHHHHHHHH
Confidence 6999999988744 677889999987776 8888887431 344555666666666554
No 61
>2zfz_A Arginine repressor; DNA binding protein, core, oligomeriza domain, alpha/beta topology, structural genomics; HET: ARG; 1.85A {Mycobacterium tuberculosis} PDB: 3bue_A 3cag_A*
Probab=34.35 E-value=59 Score=23.21 Aligned_cols=36 Identities=22% Similarity=0.409 Sum_probs=29.5
Q ss_pred cCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCC
Q 015031 98 AGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGF 137 (414)
Q Consensus 98 aGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~ 137 (414)
++|-+|+|..|-. +..++.++.+.++|+ ++..+.|+
T Consensus 20 ~~n~vVikT~PG~---A~~vA~~iD~~~~~e-IlGTIAGD 55 (79)
T 2zfz_A 20 SGNLAVLRTPPGA---AHYLASAIDRAALPQ-VVGTIAGD 55 (79)
T ss_dssp ETTEEEEECSTTC---HHHHHHHHHHHCCTT-EEEEEECS
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEecC
Confidence 7999999988744 677889999887776 88888774
No 62
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=33.49 E-value=16 Score=29.35 Aligned_cols=77 Identities=16% Similarity=0.128 Sum_probs=45.6
Q ss_pred HHHHhcCCeEEEecCCCChhHHHHHHHHHHH-cCCCCCeEEEEc-CCchhHHHHHHhCCCcCeEEEeCC-------HHHH
Q 015031 93 SPALAAGCTMIVKPAEQTPLIALYFAHLAKL-AGVPDGVLNVVP-GFGPTAGAAIASHMDIDKVSFTGS-------TDVG 163 (414)
Q Consensus 93 ~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~-aglp~g~v~~~~-~~~~~~~~~l~~~~~~~~v~~tGs-------~~~~ 163 (414)
...+..|..++- +.-|+ +.|.+ .|++...++-++ +.++.+++.+ ....+|+|+||-+ ...+
T Consensus 25 ~~~ll~Gf~l~A-----T~gTa----~~L~e~~Gl~v~~v~k~~~eG~p~I~d~I-~~geIdlVInt~~pl~~~~h~~D~ 94 (134)
T 2xw6_A 25 HREVLARFPLVA-----TGTTG----RRIEEATGLTVEKLLSGPLGGDQQMGARV-AEGRILAVIFFRDPLTAQPHEPDV 94 (134)
T ss_dssp THHHHTTSCEEE-----CHHHH----HHHHHHHCCCCEECSCGGGTHHHHHHHHH-HTTCEEEEEEECCTTTCCTTSCCS
T ss_pred HHHHhCCCEEEE-----ccHHH----HHHHHhhCceEEEEEecCCCCcchHHHHH-HCCCccEEEEccCcccCCCccchH
Confidence 334445665543 33444 34445 799977666555 4234455555 5567999999977 2345
Q ss_pred HHHHHHHhhCCCCceee
Q 015031 164 RQVMQAAATSNLKPVSL 180 (414)
Q Consensus 164 ~~i~~~~~~~~~~~~~~ 180 (414)
..|.+.+. ....|+..
T Consensus 95 ~~IrR~A~-~~~IP~~T 110 (134)
T 2xw6_A 95 QALLRVCD-VHGVPLAT 110 (134)
T ss_dssp HHHHHHHH-HHTCCEEC
T ss_pred HHHHHHHH-HcCCCeEc
Confidence 66777765 45556554
No 63
>1xxa_A ARGR, arginine repressor; complex (DNA binding protein/peptide); HET: ARG; 2.20A {Escherichia coli K12} SCOP: d.74.2.1 PDB: 1xxb_A* 1xxc_A
Probab=32.47 E-value=50 Score=23.58 Aligned_cols=38 Identities=18% Similarity=0.352 Sum_probs=31.2
Q ss_pred cCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCc
Q 015031 98 AGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFG 138 (414)
Q Consensus 98 aGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~ 138 (414)
++|-+|+|..|- .+..++.++.+.+.+++++..+.|++
T Consensus 14 ~~n~vVikT~PG---~A~~va~~iD~~~~~~~I~GTIAGDD 51 (78)
T 1xxa_A 14 NDAVVVIHTSPG---AAQLIARLLDSLGKAEGILGTIAGDD 51 (78)
T ss_dssp CSSCEEEEESTT---THHHHHHHHTTTTTTTTEEEEEECSS
T ss_pred cCCEEEEEeCCC---cHHHHHHHHHhcCCCCCeEEEEecCC
Confidence 689999998864 46778889888878888999998853
No 64
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=31.64 E-value=33 Score=28.88 Aligned_cols=115 Identities=17% Similarity=0.084 Sum_probs=71.2
Q ss_pred CcEEEEEcCCC-cChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHH-cCCCCCeEEEEcC-CchhHHHHHHhC
Q 015031 72 IGVVGHIIPWN-FPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKL-AGVPDGVLNVVPG-FGPTAGAAIASH 148 (414)
Q Consensus 72 ~Gvv~~i~p~n-~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~-aglp~g~v~~~~~-~~~~~~~~l~~~ 148 (414)
.|-|+++...+ =+-...+.+-...+.+|..++- +.-|+ +.|.+ .|+|...++-++. .++.+++.+ ..
T Consensus 27 ~g~V~lsv~D~dK~~lv~~ak~~~~lL~Gf~L~A-----T~gTa----~~L~e~~Gl~v~~v~k~~eGG~pqI~d~I-~~ 96 (178)
T 1vmd_A 27 KKRIALIAHDRRKRDLLEWVSFNLGTLSKHELYA-----TGTTG----ALLQEKLGLKVHRLKSGPLGGDQQIGAMI-AE 96 (178)
T ss_dssp SCEEEEEECGGGHHHHHHHHHHSHHHHTTSEEEE-----CHHHH----HHHHHHHCCCCEECSCGGGTHHHHHHHHH-HT
T ss_pred CCEEEEEEehhhHHHHHHHHHHHHHHhcCCEEEE-----chHHH----HHHHHHhCceeEEEeecCCCCCchHHHHH-HC
Confidence 37666554444 3444555556666777887764 34444 44445 7999765553332 123445444 56
Q ss_pred CCcCeEEEeCC-------HHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccC
Q 015031 149 MDIDKVSFTGS-------TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKG 212 (414)
Q Consensus 149 ~~~~~v~~tGs-------~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~G 212 (414)
..+|+|+||-+ ...+..|.+.|. ....|+..-+ ..++.++.+.+++..
T Consensus 97 geIdlVInt~dPl~~~~h~~D~~~IRR~A~-~~~IP~~Tnl---------------atA~A~v~ail~~~~ 151 (178)
T 1vmd_A 97 GKIDVLIFFWDPLEPQAHDVDVKALIRIAT-VYNIPVAITR---------------STADFLISSPLMNDV 151 (178)
T ss_dssp TSCCEEEEECCSSSCCTTSCCHHHHHHHHH-HTTCCEESSH---------------HHHHHHHHSGGGGSC
T ss_pred CCccEEEEccCccCCCcccccHHHHHHHHH-HcCCCEEeCH---------------HHHHHHHHHHhcccc
Confidence 67999999976 346678888877 5667766543 456777777776664
No 65
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=29.71 E-value=34 Score=27.22 Aligned_cols=48 Identities=15% Similarity=0.061 Sum_probs=31.0
Q ss_pred CeEEEEcCCchhHHHHHHhCCCcCeEEEeCCHHHHHHHHHHHhhCCCCc
Q 015031 129 GVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKP 177 (414)
Q Consensus 129 g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs~~~~~~i~~~~~~~~~~~ 177 (414)
+.+++++|+.++........+.+.+|++||+......+.+.+. +.+.|
T Consensus 53 ~~l~I~~G~r~~~~l~a~~~~~~~~iIlt~g~~~~~~i~~~A~-~~~ip 100 (139)
T 2ioj_A 53 NAALVTGGDRSDLLLTALEMPNVRCLILTGNLEPVQLVLTKAE-ERGVP 100 (139)
T ss_dssp SEEEEEETTCHHHHHHHTTCTTEEEEEEETTCCCCHHHHHHHH-HHTCC
T ss_pred CEEEEEcCCHHHHHHHHHhCCCCcEEEEcCCCCCCHHHHHHHH-HCCCe
Confidence 5688887866555444443256889999998776666666654 33344
No 66
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=29.26 E-value=73 Score=28.56 Aligned_cols=88 Identities=9% Similarity=0.017 Sum_probs=53.6
Q ss_pred EEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCCHHHHHHHHHHHhhC-CCCceee
Q 015031 102 MIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS-NLKPVSL 180 (414)
Q Consensus 102 vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs~~~~~~i~~~~~~~-~~~~~~~ 180 (414)
+|.+|.+.+......+.+.|.+.|+.- .....|.|+.-|+..+-....+..... ..+|++.
T Consensus 5 ii~n~~~~~~~~~~~l~~~l~~~g~~v------------------~~~~~D~vv~lGGDGT~l~aa~~~~~~~~~~PilG 66 (272)
T 2i2c_A 5 ITSKGDEKSDLLRLNMIAGFGEYDMEY------------------DDVEPEIVISIGGDGTFLSAFHQYEERLDEIAFIG 66 (272)
T ss_dssp EEECCSHHHHHHHHHHHHHHTTSSCEE------------------CSSSCSEEEEEESHHHHHHHHHHTGGGTTTCEEEE
T ss_pred EEECCCHHHHHHHHHHHHHHHHCCCEe------------------CCCCCCEEEEEcCcHHHHHHHHHHhhcCCCCCEEE
Confidence 455654434444555666677766531 024579999999999988888876522 2567443
Q ss_pred eCCCCCceee-cCCCCHHHHHHHHHHHH
Q 015031 181 ELGGKSPLLI-FDDVDVNTAADMALLGI 207 (414)
Q Consensus 181 e~gG~~~~iV-~~dadl~~a~~~i~~~~ 207 (414)
--.|.+-++- ....|++.+++.+..+.
T Consensus 67 In~G~lgfl~~~~~~~~~~~l~~l~~g~ 94 (272)
T 2i2c_A 67 IHTGHLGFYADWRPAEADKLVKLLAKGE 94 (272)
T ss_dssp EESSSCCSSCCBCGGGHHHHHHHHHTTC
T ss_pred EeCCCCCcCCcCCHHHHHHHHHHHHcCC
Confidence 3334333221 12457888999888764
No 67
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=28.03 E-value=93 Score=25.71 Aligned_cols=50 Identities=20% Similarity=0.026 Sum_probs=34.7
Q ss_pred hHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHH---hCCCcCeEEEeCCHH
Q 015031 112 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIA---SHMDIDKVSFTGSTD 161 (414)
Q Consensus 112 ~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~---~~~~~~~v~~tGs~~ 161 (414)
.....|.+.|.+.|+..-...+++.+.......+. .....|.|+.||+..
T Consensus 40 ~ng~~L~~~L~~~G~~v~~~~iV~Dd~~~i~~al~~~~a~~~~DlVittGG~g 92 (178)
T 3iwt_A 40 ESGDIIKQLLIENGHKIIGYSLVPDDKIKILKAFTDALSIDEVDVIISTGGTG 92 (178)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHTCTTCCEEEEESCCS
T ss_pred chHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhcCCCCEEEecCCcc
Confidence 45577899999999876666667654344444443 345689999999875
No 68
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=27.86 E-value=63 Score=26.60 Aligned_cols=50 Identities=18% Similarity=0.210 Sum_probs=35.6
Q ss_pred hHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhC--CCcCeEEEeCCHHH
Q 015031 112 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASH--MDIDKVSFTGSTDV 162 (414)
Q Consensus 112 ~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~--~~~~~v~~tGs~~~ 162 (414)
.....+.+.+++.|...-...+++.+ ..+.+.+... ...|.|+.||+...
T Consensus 27 sn~~~l~~~l~~~G~~v~~~~iv~Dd-~~i~~al~~a~~~~~DlVittGG~s~ 78 (164)
T 3pzy_A 27 RCGPIITEWLAQQGFSSAQPEVVADG-SPVGEALRKAIDDDVDVILTSGGTGI 78 (164)
T ss_dssp CHHHHHHHHHHHTTCEECCCEEECSS-HHHHHHHHHHHHTTCSEEEEESCCSS
T ss_pred HHHHHHHHHHHHCCCEEEEEEEeCCH-HHHHHHHHHHHhCCCCEEEECCCCCC
Confidence 34566788899999876667778776 6666555432 35899999998864
No 69
>2p5m_A Arginine repressor; alpha-beta, L-arginine binding domain, DNA binding protein; HET: ARG; 1.95A {Bacillus subtilis} SCOP: d.74.2.1
Probab=26.96 E-value=82 Score=22.66 Aligned_cols=56 Identities=11% Similarity=0.082 Sum_probs=39.3
Q ss_pred cCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCCHHHHHHHHHHH
Q 015031 98 AGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 170 (414)
Q Consensus 98 aGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs~~~~~~i~~~~ 170 (414)
++|-+|+|..|-. +..++.++.+.++|+ ++..+.|++. .++..=+...+..+.+..
T Consensus 24 ~~n~vVikT~PG~---A~~vA~~iD~~~~~e-IlGTIAGDDT-------------Ilvi~r~~~~a~~l~~~l 79 (83)
T 2p5m_A 24 ASHMIVLKTMPGN---AQAIGALMDNLDWDE-MMGTICGDDT-------------ILIICRTPEDTEGVKNRL 79 (83)
T ss_dssp ETTEEEEEESTTC---HHHHHHHHHTTTCTT-CCEEEECSSE-------------EEEECSSHHHHHHHHHHH
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEecCCE-------------EEEEECCHHHHHHHHHHH
Confidence 7999999988744 678899999887776 8888877431 244445555666665544
No 70
>3v4g_A Arginine repressor; vibrio vulnificus CMCP6, virulence, type secretion system, center for structural genomics of infecti diseases, csgid; 1.60A {Vibrio vulnificus} PDB: 1aoy_A
Probab=26.52 E-value=65 Score=27.14 Aligned_cols=40 Identities=20% Similarity=0.303 Sum_probs=33.0
Q ss_pred HhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCc
Q 015031 96 LAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFG 138 (414)
Q Consensus 96 LaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~ 138 (414)
-.++|-+|+|..|-. +..++.++...++|++++..+.|++
T Consensus 114 ~~~~nlvVIkT~PG~---A~~vA~~ID~~~~~e~IlGTIAGDD 153 (180)
T 3v4g_A 114 DHNQALVVIHTGPGA---AQLIARMLDSLGKSEGILGVVAGDD 153 (180)
T ss_dssp EECSSCEEEEESTTC---HHHHHHHHHHHCGGGTEEEEEECSS
T ss_pred eecCCEEEEEeCCCc---HHHHHHHHHhCCCCCCeEEEEecCC
Confidence 347999999988754 6778899988889998999998853
No 71
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.36 E-value=27 Score=29.35 Aligned_cols=49 Identities=16% Similarity=0.219 Sum_probs=35.4
Q ss_pred cccccceEEEeeeCCHHHHHHHH----hcCCCCceEEEecCCHHHHHHHHhcc
Q 015031 311 NEIFGPVMALMKFKTVEEAIKSA----NNTRYGLAAGIMTKDLNVANTVSRSI 359 (414)
Q Consensus 311 ~E~fgPvl~v~~~~~~~eai~~~----n~~~~gl~~sv~s~d~~~~~~~~~~l 359 (414)
+|.||+..+..--.++++|++.+ .....-|-.++++........+.+.+
T Consensus 25 ~~~yg~~~p~F~~gs~~~Al~~A~~~~k~e~K~LlVyLhs~~~~~~~~f~~~~ 77 (178)
T 2ec4_A 25 SSRYGDCHPVFFIGSLEAAFQEAFYVKARDRKLLAIYLHHDESVLTNVFCSQM 77 (178)
T ss_dssp HHHHCSCCCCCCCSCHHHHHHTTTSSCTTTCCEEEEEEECSSCSHHHHHHHHT
T ss_pred HHHhCCCCCCeeeCCHHHHHHHHHhhhhhhCcEEEEEEeCCCCccHHHHHHHh
Confidence 45677766666667899999999 77777799999987655555555443
No 72
>3ufx_B Succinyl-COA synthetase beta subunit; ATP-grAsp fold, ligase; HET: GDP; 2.35A {Thermus aquaticus}
Probab=26.32 E-value=2.5e+02 Score=26.66 Aligned_cols=73 Identities=23% Similarity=0.360 Sum_probs=44.6
Q ss_pred hHHHHHHHHHHHcCC-CCCeEEEEcCCchh----HHHHHHhCCCcCeEEE------eCCHHHHHHHHHHHhhCC--CCce
Q 015031 112 LIALYFAHLAKLAGV-PDGVLNVVPGFGPT----AGAAIASHMDIDKVSF------TGSTDVGRQVMQAAATSN--LKPV 178 (414)
Q Consensus 112 ~~~~~l~~~~~~agl-p~g~v~~~~~~~~~----~~~~l~~~~~~~~v~~------tGs~~~~~~i~~~~~~~~--~~~~ 178 (414)
-.+..-..++..+|+ |.+.+.+..+...+ ..+.+.++|++|.|+. +-....++.|.+... .. .+|+
T Consensus 258 Gl~~~t~D~i~~~G~~~aN~lD~gG~a~~e~~~~al~~~l~d~~v~~ilv~i~ggi~~~~~vA~~i~~a~~-~~~~~kPv 336 (397)
T 3ufx_B 258 GLVMYTLDLVNRVGGKPANFLDIGGGAKADVVYNALKVVLKDPDVKGVFINIFGGITRADEVAKGVIRALE-EGLLTKPV 336 (397)
T ss_dssp HHHHHHHHHHHHTTCCBSEEEECCSCCCHHHHHHHHHHHHTCTTCCEEEEEEEEEEEESHHHHHHHHHHHT-TTCCCSCE
T ss_pred cHHHHHHHHHHHcCCCcCCcEecCCCCCHHHHHHHHHHHHcCCCCCEEEEECCCCCCCHHHHHHHHHHHHH-hhCCCCcE
Confidence 444455677888876 54444444333333 2456788999998764 334678888877654 32 5777
Q ss_pred eeeCCCC
Q 015031 179 SLELGGK 185 (414)
Q Consensus 179 ~~e~gG~ 185 (414)
+..+.|.
T Consensus 337 vv~~~G~ 343 (397)
T 3ufx_B 337 VMRVAGT 343 (397)
T ss_dssp EEEEEEE
T ss_pred EEEccCC
Confidence 7666553
No 73
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=25.32 E-value=3.4e+02 Score=24.97 Aligned_cols=89 Identities=13% Similarity=0.050 Sum_probs=54.3
Q ss_pred HHHHHhCCCcCeEEEeCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEE
Q 015031 142 GAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRV 221 (414)
Q Consensus 142 ~~~l~~~~~~~~v~~tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v 221 (414)
.+.|+.++++|.|+....+..-..+...+. +.+++|++|-+ + ..+++.+-+ ++..+ ...|.. +
T Consensus 80 ~~~ll~~~~vD~V~I~tp~~~H~~~~~~al-~aGkhVl~EKP----l----a~~~~ea~~-l~~~a-~~~g~~------l 142 (361)
T 3u3x_A 80 AEEILEDENIGLIVSAAVSSERAELAIRAM-QHGKDVLVDKP----G----MTSFDQLAK-LRRVQ-AETGRI------F 142 (361)
T ss_dssp HHHHHTCTTCCEEEECCCHHHHHHHHHHHH-HTTCEEEEESC----S----CSSHHHHHH-HHHHH-HTTCCC------E
T ss_pred HHHHhcCCCCCEEEEeCChHHHHHHHHHHH-HCCCeEEEeCC----C----CCCHHHHHH-HHHHH-HHcCCE------E
Confidence 456677889999999888887777777666 66788888753 1 234454433 33332 223422 3
Q ss_pred EEe-CccHH-HHHHHHHHHHhccccCCC
Q 015031 222 YVQ-EGIYD-EFEKKLVEKAKAWVVGDP 247 (414)
Q Consensus 222 ~V~-~~~~~-~f~~~l~~~~~~~~~g~~ 247 (414)
.|. ...++ .....+++.++.=.+|.+
T Consensus 143 ~v~~~~R~~~p~~~~~k~~i~~g~iG~i 170 (361)
T 3u3x_A 143 SILYSEHFESPATVKAGELVAAGAIGEV 170 (361)
T ss_dssp EEECHHHHTCHHHHHHHHHHHTTTTSSE
T ss_pred EEechHhhCCHHHHHHHHHHHcCCCCCe
Confidence 343 33364 667778887776455543
No 74
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=24.93 E-value=71 Score=27.01 Aligned_cols=52 Identities=19% Similarity=0.068 Sum_probs=36.0
Q ss_pred hHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhC--CCcCeEEEeCCHHHH
Q 015031 112 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASH--MDIDKVSFTGSTDVG 163 (414)
Q Consensus 112 ~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~--~~~~~v~~tGs~~~~ 163 (414)
.....+.+.+.+.|...-...+++.+...+.+.+... ...|.|+.||+...+
T Consensus 49 sn~~~L~~~L~~~G~~v~~~~iv~Dd~~~I~~al~~a~~~~~DlVIttGGts~g 102 (185)
T 3rfq_A 49 HSGPLVTELLTEAGFVVDGVVAVEADEVDIRNALNTAVIGGVDLVVSVGGTGVT 102 (185)
T ss_dssp SHHHHHHHHHHHTTEEEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEESCCSSS
T ss_pred cHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhCCCCEEEECCCCCCC
Confidence 4556788889999887666677776544455555432 468999999998643
No 75
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=24.65 E-value=2.9e+02 Score=25.24 Aligned_cols=103 Identities=16% Similarity=0.141 Sum_probs=58.3
Q ss_pred EEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcC--Cch--hHHHHHHhCCCcCeEEEeCCHHHHHHHHHHHhh---CC
Q 015031 102 MIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPG--FGP--TAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT---SN 174 (414)
Q Consensus 102 vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~--~~~--~~~~~l~~~~~~~~v~~tGs~~~~~~i~~~~~~---~~ 174 (414)
+|++|..........+.+.|.++|.. +.+... .+. +....+.. ...|.|+..|+..+-..+...+.. ..
T Consensus 34 vi~Np~sg~~~~~~~i~~~l~~~g~~---~~~~~t~~~~~~~~~~~~~~~-~~~d~vvv~GGDGTl~~v~~~l~~~~~~~ 109 (332)
T 2bon_A 34 LILNGKSTDNLPLREAIMLLREEGMT---IHVRVTWEKGDAARYVEEARK-FGVATVIAGGGDGTINEVSTALIQCEGDD 109 (332)
T ss_dssp EEECSSSTTCHHHHHHHHHHHTTTCC---EEEEECCSTTHHHHHHHHHHH-HTCSEEEEEESHHHHHHHHHHHHHCCSSC
T ss_pred EEECCCCCCCchHHHHHHHHHHcCCc---EEEEEecCcchHHHHHHHHHh-cCCCEEEEEccchHHHHHHHHHhhcccCC
Confidence 55566544333445567777877775 333321 121 12222222 347899999999999988887752 22
Q ss_pred CCcee-eeCCCCCcee--ecCCCCHHHHHHHHHHHHh
Q 015031 175 LKPVS-LELGGKSPLL--IFDDVDVNTAADMALLGIL 208 (414)
Q Consensus 175 ~~~~~-~e~gG~~~~i--V~~dadl~~a~~~i~~~~~ 208 (414)
..|+- +-+|--|-+. +.-..|++.+++.+..+.+
T Consensus 110 ~~plgiiP~Gt~N~fa~~l~i~~~~~~al~~i~~g~~ 146 (332)
T 2bon_A 110 IPALGILPLGTANDFATSVGIPEALDKALKLAIAGDA 146 (332)
T ss_dssp CCEEEEEECSSSCHHHHHTTCCSSHHHHHHHHHHSEE
T ss_pred CCeEEEecCcCHHHHHHhcCCCCCHHHHHHHHHcCCe
Confidence 34533 3344444222 2214578999998887644
No 76
>2v9v_A Selenocysteine-specific elongation factor; transcription, protein conformational change, transcription elongation factor SELB; 1.10A {Moorella thermoacetica} SCOP: a.4.5.35 a.4.5.35
Probab=24.37 E-value=75 Score=24.73 Aligned_cols=80 Identities=11% Similarity=0.166 Sum_probs=46.1
Q ss_pred HHHHHHhcccCCcccc--CcEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcc-------ccCCHHHHHHHHHHHHH
Q 015031 202 MALLGILFNKGEICVA--SSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQG-------PQVDKKQFDRILSYIEH 272 (414)
Q Consensus 202 ~i~~~~~~~~Gq~C~a--~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~g-------pl~~~~~~~~~~~~i~~ 272 (414)
..+........-.|.. ....+++.+.++++.+.+.+.++.+.--.|..++..-. |-.+..- +..+++.
T Consensus 36 ~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~yH~~~P~~~G~~keeLr~~~~~~~~~~~---~~~ll~~ 112 (135)
T 2v9v_A 36 KLLQSMAAAGQVTLLRVENDLYAISTERYQAWWQAVTRALEEFHSRYPLRPGLAREELRSRYFSRLPARV---YQALLEE 112 (135)
T ss_dssp HHHHHHHHTTCEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHHCTTSSCEEHHHHHHHHCTTSCHHH---HHHHHHH
T ss_pred HHHHHHHhCCcEEEEecCCCeEEecHHHHHHHHHHHHHHHHHHHHhCCCccCCCHHHHHHHhcccCCHHH---HHHHHHH
Confidence 3333333334434443 23447999999999999999998865556655443222 2123333 4456676
Q ss_pred hhhcCCeEeeCC
Q 015031 273 GKREGATLLTGG 284 (414)
Q Consensus 273 a~~~ga~v~~gg 284 (414)
..++|.-...|+
T Consensus 113 l~~~g~l~~~~~ 124 (135)
T 2v9v_A 113 WSREGRLQLAAN 124 (135)
T ss_dssp HHHTTSEEECSS
T ss_pred HHHCCCEEecCC
Confidence 777775544443
No 77
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=23.36 E-value=3.6e+02 Score=24.89 Aligned_cols=86 Identities=10% Similarity=0.006 Sum_probs=51.9
Q ss_pred hcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEc-CC-------chhHHHHHHhCCCcCeEEEe---CCHHHHHH
Q 015031 97 AAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVP-GF-------GPTAGAAIASHMDIDKVSFT---GSTDVGRQ 165 (414)
Q Consensus 97 aaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~-~~-------~~~~~~~l~~~~~~~~v~~t---Gs~~~~~~ 165 (414)
..|+.-++.=|- ..+..+...+.+.|+.- =.++. |. -.+..+.|..+|+.+.|... |+... +.
T Consensus 167 ~~G~vgivSqSG---~l~~~i~~~~~~~g~G~--S~~VsiGn~~~~d~~~~D~l~~~~~Dp~T~~I~l~gEi~g~~e-~~ 240 (334)
T 3mwd_B 167 RPGSVAYVSRSG---GMSNELNNIISRTTDGV--YEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEE-YK 240 (334)
T ss_dssp SCCSEEEEESCH---HHHHHHHHHHHHHSSCE--EEEEECCSSSSCSSCHHHHHHHHHTCTTCCEEEEEEESSSSHH-HH
T ss_pred CCCCEEEEeCch---HHHHHHHHHHHhcCCCe--EEEEECCCCccCCCCHHHHHHHHhcCCCCCEEEEEEecCChHH-HH
Confidence 457777764433 23344555556666642 22332 22 23456788999999998874 56655 55
Q ss_pred HHHHHhh-CCCCceeeeCCCCCce
Q 015031 166 VMQAAAT-SNLKPVSLELGGKSPL 188 (414)
Q Consensus 166 i~~~~~~-~~~~~~~~e~gG~~~~ 188 (414)
..+.+.. ...||++.--.|.+..
T Consensus 241 ~~~~~r~~~~~KPVV~~kaGrs~~ 264 (334)
T 3mwd_B 241 ICRGIKEGRLTKPIVCWCIGTCAT 264 (334)
T ss_dssp HHHHHHTTSCCSCEEEEEECTTCC
T ss_pred HHHHHHhhcCCCCEEEEEcCCCcc
Confidence 5555442 3578999888777653
No 78
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=23.13 E-value=3e+02 Score=25.10 Aligned_cols=104 Identities=15% Similarity=0.081 Sum_probs=59.2
Q ss_pred eEEEecCCCC---hhHHHHHHHHHHHcCCCCCeEEEEcCC--ch--hHHHHHHhCCCcCeEEEeCCHHHHHHHHHHHhh-
Q 015031 101 TMIVKPAEQT---PLIALYFAHLAKLAGVPDGVLNVVPGF--GP--TAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT- 172 (414)
Q Consensus 101 ~vv~kps~~~---~~~~~~l~~~~~~aglp~g~v~~~~~~--~~--~~~~~l~~~~~~~~v~~tGs~~~~~~i~~~~~~- 172 (414)
.+|+.|.... ......+.+.|.++|+. +.+.... +. +....+. ....|.|+..|+..+-..+...+..
T Consensus 28 ~vI~NP~sg~~~~~~~~~~i~~~L~~~g~~---~~~~~t~~~~~a~~~~~~~~-~~~~d~vvv~GGDGTv~~v~~~l~~~ 103 (337)
T 2qv7_A 28 RIIYNPTSGKEQFKRELPDALIKLEKAGYE---TSAYATEKIGDATLEAERAM-HENYDVLIAAGGDGTLNEVVNGIAEK 103 (337)
T ss_dssp EEEECTTSTTSCHHHHHHHHHHHHHHTTEE---EEEEECCSTTHHHHHHHHHT-TTTCSEEEEEECHHHHHHHHHHHTTC
T ss_pred EEEECCCCCCCchHHHHHHHHHHHHHcCCe---EEEEEecCcchHHHHHHHHh-hcCCCEEEEEcCchHHHHHHHHHHhC
Confidence 3566666542 23445677778888764 3333221 21 1222222 2457999999999999999888731
Q ss_pred CCCCc-eeeeCCCCCcee-e-cCCCCHHHHHHHHHHHHh
Q 015031 173 SNLKP-VSLELGGKSPLL-I-FDDVDVNTAADMALLGIL 208 (414)
Q Consensus 173 ~~~~~-~~~e~gG~~~~i-V-~~dadl~~a~~~i~~~~~ 208 (414)
....| .++-+|--|-+- . .-..|++.+++.+..+.+
T Consensus 104 ~~~~pl~iIP~GT~N~lAr~Lg~~~~~~~al~~i~~g~~ 142 (337)
T 2qv7_A 104 PNRPKLGVIPMGTVNDFGRALHIPNDIMGALDVIIEGHS 142 (337)
T ss_dssp SSCCEEEEEECSSCCHHHHHTTCCSSHHHHHHHHHHTCE
T ss_pred CCCCcEEEecCCcHhHHHHHcCCCCCHHHHHHHHHcCCc
Confidence 33344 333344333222 1 124588999998887643
No 79
>3lo3_A Uncharacterized conserved protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.38A {Colwellia psychrerythraea} SCOP: d.58.4.0
Probab=21.54 E-value=2.4e+02 Score=20.55 Aligned_cols=23 Identities=17% Similarity=0.361 Sum_probs=19.5
Q ss_pred ceEEEeeeCCHHHHHHHHhcCCC
Q 015031 316 PVMALMKFKTVEEAIKSANNTRY 338 (414)
Q Consensus 316 Pvl~v~~~~~~~eai~~~n~~~~ 338 (414)
..+.|+.|+|.+.|.++.|+-+|
T Consensus 53 ~~~viieFps~~aa~a~y~SpeY 75 (94)
T 3lo3_A 53 KAQVILEFPSREDAYNWYHSEEY 75 (94)
T ss_dssp SEEEEEEESSHHHHHHHHHSHHH
T ss_pred CeEEEEECCCHHHHHHHHCCHHH
Confidence 47899999999999999987543
No 80
>1b4a_A Arginine repressor; helix turn helix; 2.50A {Geobacillus stearothermophilus} SCOP: a.4.5.3 d.74.2.1 PDB: 1f9n_A
Probab=20.79 E-value=1.5e+02 Score=23.94 Aligned_cols=56 Identities=9% Similarity=0.111 Sum_probs=40.3
Q ss_pred cCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCCHHHHHHHHHHH
Q 015031 98 AGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 170 (414)
Q Consensus 98 aGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs~~~~~~i~~~~ 170 (414)
++|-+|+|..|-. +..++.++...++|+ ++..+.|++- .++.+=+...+..+.+..
T Consensus 90 ~~n~vVikT~PG~---A~~va~~iD~~~~~e-IlGTIAGDDT-------------Ilvi~r~~~~a~~l~~~l 145 (149)
T 1b4a_A 90 TGNLLVLRTLPGN---AHAIGVLLDNLDWDE-IVGTICGDDT-------------CLIICRTPKDAKKVSNQL 145 (149)
T ss_dssp ETTEEEEEESTTC---HHHHHHHHHHHTCTT-EEEEEECSSE-------------EEEEESSHHHHHHHHHHH
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEecCCE-------------EEEEeCCHHHHHHHHHHH
Confidence 7999999988754 678899999987876 8888888431 344455566666665544
No 81
>3jtp_A Adapter protein MECA 1; MECA;adaptor protein;degradation TAG, competence, sporulation, protein binding; 2.17A {Bacillus subtilis} PDB: 2y1r_I* 3pxg_a
Probab=20.64 E-value=1.3e+02 Score=22.37 Aligned_cols=29 Identities=10% Similarity=0.249 Sum_probs=22.3
Q ss_pred eEEEeeeCCHHHHHHHHhcCCCC-ceEEEec
Q 015031 317 VMALMKFKTVEEAIKSANNTRYG-LAAGIMT 346 (414)
Q Consensus 317 vl~v~~~~~~~eai~~~n~~~~g-l~~sv~s 346 (414)
.-.|+.|+|+|++|+++. .+.. ...++|.
T Consensus 7 ~~~i~~F~d~edvI~~a~-~~~~~~~s~LYk 36 (98)
T 3jtp_A 7 LQFVLRFGDFEDVISLSK-LNVNGSKTTLYS 36 (98)
T ss_dssp CEEEEEESSHHHHHHHHH-TTCCCSEEEEEE
T ss_pred cEEEEEcCCHHHHHHHhC-CCCCCCCceeEE
Confidence 456899999999999998 5443 5666665
Done!