BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015033
(414 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3R3E|A Chain A, The Glutathione Bound Structure Of Yqjg, A Glutathione
Transferase Homolog From Escherichia Coli K-12
pdb|3R3E|B Chain B, The Glutathione Bound Structure Of Yqjg, A Glutathione
Transferase Homolog From Escherichia Coli K-12
pdb|4G0I|A Chain A, Glutathionyl-hydroquinone Reductase, Yqjg Of Escherichia
Coli
pdb|4G0I|B Chain B, Glutathionyl-hydroquinone Reductase, Yqjg Of Escherichia
Coli
pdb|4G0K|A Chain A, Glutathionyl-hydroquinone Reductase, Yqjg, Of E.coli
Complexed With Gs-menadione
pdb|4G0K|B Chain B, Glutathionyl-hydroquinone Reductase, Yqjg, Of E.coli
Complexed With Gs-menadione
pdb|4G0L|A Chain A, Glutathionyl-hydroquinone Reductase, Yqjg, Of E.coli
Complexed With Gsh
pdb|4G0L|B Chain B, Glutathionyl-hydroquinone Reductase, Yqjg, Of E.coli
Complexed With Gsh
Length = 328
Score = 215 bits (548), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 122/284 (42%), Positives = 162/284 (57%), Gaps = 18/284 (6%)
Query: 120 HLYVGLPCPWAHRTLIVRALKGLEDAVPVSIAGPGQ-DGSWEFTNNRNPSRDKDIPVPGL 178
HLYV L CPWAHRTLI+R LKGLE + VS+ P + W F D PG
Sbjct: 56 HLYVSLACPWAHRTLIMRKLKGLEPFISVSVVNPLMLENGWTF----------DDSFPGA 105
Query: 179 DNENGCKN--LKEVYKLRKGGYSGRATVPMLWDVDNKDVACNESYDIIQFFNSGLNRSAR 236
+ +N L ++Y YSGR TVP+LWD N + NES +II+ FN+ +
Sbjct: 106 TGDTLYQNEFLYQLYLHADPHYSGRVTVPVLWDKKNHTIVSNESAEIIRMFNTAFDALGA 165
Query: 237 NPDLDLAPVELKGKIEEWNKIIYPNVNNGVYRCGFAQSQEAYDTAVNDLFSKLDMIDDHL 296
D P L+ KI+E N IY VNNGVY+ GFA SQEAYD AV +F L ++ L
Sbjct: 166 KAG-DYYPPALQTKIDELNGWIYDTVNNGVYKAGFATSQEAYDEAVAKVFESLARLEQIL 224
Query: 297 GGSRYLCGDTLTLADVCLFTTLIRFDLVYNVLFKCTKKKLLEYPNLHGYMREIYQIPEVA 356
G RYL G+ LT AD+ L+TTL+RFD VY FKC K ++ +Y NL+G++R+IYQ+P +A
Sbjct: 225 GQHRYLTGNQLTEADIRLWTTLVRFDPVYVTHFKCDKHRISDYLNLYGFLRDIYQMPGIA 284
Query: 357 ATCNLTAIMDGYYKILFPLNPGSIRPVMPSGCEHEVLLRPHNRE 400
T N I + Y++ +NP I + P + L PH R+
Sbjct: 285 ETVNFDHIRNHYFRSHKTINPTGIISIGPW----QDLDEPHGRD 324
>pdb|3PPU|A Chain A, Crystal Structure Of The Glutathione-S-Transferase Xi From
Phanerochaete Chrysosporium
pdb|3PPU|B Chain B, Crystal Structure Of The Glutathione-S-Transferase Xi From
Phanerochaete Chrysosporium
Length = 352
Score = 206 bits (524), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 124/305 (40%), Positives = 168/305 (55%), Gaps = 22/305 (7%)
Query: 94 SDSSGSYTRPASKF--FLRNN---PPSTANLHLYVGLPCPWAHRTLIVRALKGLEDAVPV 148
++ GS+ R A+ F +++ N P HLYV CPWA RTLIVR LKGLED + V
Sbjct: 48 TEDDGSFKRKAASFRNWIQPNGDFTPEKGRYHLYVSYACPWATRTLIVRKLKGLEDFIGV 107
Query: 149 SIAGP--GQDGSWEFTNNRNPSRDKDIPVPGLDNE--NGCKNLKEVYKLRKGGYSGRATV 204
++ P G +G W F N P P D++ N +++K++Y K Y GR TV
Sbjct: 108 TVVSPRXGSNG-WPFANVD--------PFPAADSDPLNNAQHVKDLYLKVKPDYDGRFTV 158
Query: 205 PMLWDVDNKDVACNESYDIIQFFNSGLNR--SARNPDLDLAPVELKGKIEEWNKIIYPNV 262
P+LWD + NES +II+ FN+ N LDL P L+ KI+E N +Y V
Sbjct: 159 PVLWDKHTGTIVNNESSEIIRXFNTAFNHLLPEDKAKLDLYPESLRAKIDEVNDWVYDTV 218
Query: 263 NNGVYRCGFAQSQEAYDTAVNDLFSKLDMIDDHLGGSRYLCGDTLTLADVCLFTTLIRFD 322
NNGVY+ GFA +Q+AY+ AV LF LD ++ L G YL G LT AD+ LF T++RFD
Sbjct: 219 NNGVYKSGFASTQKAYEAAVIPLFESLDRLEKXLEGQDYLIGGQLTEADIRLFVTIVRFD 278
Query: 323 LVYNVLFKCTKKKLLE-YPNLHGYMREIY-QIPEVAATCNLTAIMDGYYKILFPLNPGSI 380
VY FKC + + + YPNLH + R++Y P TCN I Y+ +NP I
Sbjct: 279 PVYVTHFKCNLRTIRDGYPNLHRWXRKLYWGNPAFKDTCNFEHIKTHYFWSHTFINPHRI 338
Query: 381 RPVMP 385
P+ P
Sbjct: 339 VPIGP 343
>pdb|4FQU|A Chain A, Glutathionyl-hydroquinone Reductase Pcpf Of Sphingobium
Chlorophenolicum
pdb|4FQU|B Chain B, Glutathionyl-hydroquinone Reductase Pcpf Of Sphingobium
Chlorophenolicum
pdb|4FQU|C Chain C, Glutathionyl-hydroquinone Reductase Pcpf Of Sphingobium
Chlorophenolicum
pdb|4FQU|D Chain D, Glutathionyl-hydroquinone Reductase Pcpf Of Sphingobium
Chlorophenolicum
pdb|4FQU|E Chain E, Glutathionyl-hydroquinone Reductase Pcpf Of Sphingobium
Chlorophenolicum
pdb|4FQU|F Chain F, Glutathionyl-hydroquinone Reductase Pcpf Of Sphingobium
Chlorophenolicum
pdb|4FQU|G Chain G, Glutathionyl-hydroquinone Reductase Pcpf Of Sphingobium
Chlorophenolicum
pdb|4FQU|H Chain H, Glutathionyl-hydroquinone Reductase Pcpf Of Sphingobium
Chlorophenolicum
Length = 313
Score = 201 bits (511), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 123/315 (39%), Positives = 166/315 (52%), Gaps = 28/315 (8%)
Query: 80 WNAAWQLMMSQLAPSDSSGSYTRPASKF------FLRNNPPSTANLHLYVGLPCPWAHRT 133
W AW S S G + R S++ R P HLY G CPWAHR
Sbjct: 9 WRDAWYDTKS------SGGRFVRKESQYRGGLDAGFRGEP---GRYHLYAGFACPWAHRV 59
Query: 134 LIVRALKGLEDAVPVSI--AGPGQDGSWEFTNNRNPSRDKDIPVPGLDNENGCKNLKEVY 191
LI+RALKGLE+ + VS+ A G++G W F D +P D+ NG L +VY
Sbjct: 60 LIMRALKGLEEMISVSMVNAYMGENG-WTFLPG-----DDVVP----DSINGADYLYQVY 109
Query: 192 KLRKGGYSGRATVPMLWDVDNKDVACNESYDIIQFFNSGLNRSARNPDLDLAPVELKGKI 251
Y+GR T+P+LWD K + NES +II+ NS + P D P E + +I
Sbjct: 110 TAADPTYTGRVTIPILWDKVEKRILNNESSEIIRILNSAFDDVGALPG-DYYPAEFRPEI 168
Query: 252 EEWNKIIYPNVNNGVYRCGFAQSQEAYDTAVNDLFSKLDMIDDHLGGSRYLCGDTLTLAD 311
+ N +Y +NNGVYR GFA +QEAY+ A LF LD +++HL G +L GD LT AD
Sbjct: 169 DRINARVYETLNNGVYRSGFATTQEAYEEAFYPLFDTLDWLEEHLTGREWLVGDRLTEAD 228
Query: 312 VCLFTTLIRFDLVYNVLFKCTKKKLLEYPNLHGYMREIYQIPEVAATCNLTAIMDGYYKI 371
+ LF TL+RFD +Y+ FKC +++ +YPNL + ++ VA T NL YY
Sbjct: 229 IRLFPTLVRFDAIYHGHFKCNLRRIADYPNLSRLVGKLASHERVAPTINLRHAKAHYYGS 288
Query: 372 LFPLNPGSIRPVMPS 386
+NP I PV P+
Sbjct: 289 HPSVNPTGIVPVGPA 303
>pdb|3M1G|A Chain A, The Structure Of A Putative Glutathione S-Transferase From
Corynebacterium Glutamicum
pdb|3M1G|B Chain B, The Structure Of A Putative Glutathione S-Transferase From
Corynebacterium Glutamicum
pdb|3M1G|C Chain C, The Structure Of A Putative Glutathione S-Transferase From
Corynebacterium Glutamicum
Length = 362
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 110/291 (37%), Positives = 145/291 (49%), Gaps = 14/291 (4%)
Query: 113 PPSTANLHLYVGLPCPWAHRTLIVRALKGLEDAVPVSIAGPGQD-GSWEFTNNRNPSRDK 171
P L CPWAHRT+I R L GLE+ + + + GP D SW F
Sbjct: 56 PVEAGRYRLVAARACPWAHRTVITRRLLGLENVISLGLTGPTHDVRSWTF---------- 105
Query: 172 DIPVPGLDNENGCKNLKEVYKLRKGGYSGRATVPMLWDVDNKDVACNESYDIIQFFNSGL 231
D+ LD L++ Y R Y TVP L + +K V N+ I FN
Sbjct: 106 DLDPNHLDPVLQIPRLQDAYFNRFPDYPRGITVPALVEESSKKVVTNDYPSITIDFNLEW 165
Query: 232 NRSARNPDLDLAPVELKGKIEEWNKIIYPNVNNGVYRCGFAQSQEAYDTAVNDLFSKLDM 291
+ R +L P EL+ + K I+ VNNGVYR GFA SQEA++ A L+ LD
Sbjct: 166 KQFHREGAPNLYPAELREEXAPVXKRIFTEVNNGVYRTGFAGSQEAHNEAYKRLWVALDW 225
Query: 292 IDDHLGGSRYLCGDTLTLADVCLFTTLIRFDLVYNVLFKCTKKKLLEYPNLHGYMREIYQ 351
++D L RYL GD +T AD+ L+ TL+RFD VY+ FKC + K+ E PNL GY+R+++Q
Sbjct: 226 LEDRLSTRRYLXGDHITEADIRLYPTLVRFDAVYHGHFKCGRNKITEXPNLWGYLRDLFQ 285
Query: 352 IPEVAATCNLTAIMDGYYKILFPLNPGSIRPVMPSGCEHEVLLRPHNRESL 402
P T + T I YY +NP I PV P + PH RE L
Sbjct: 286 TPGFGDTTDFTEIKQHYYITHAEINPTRIVPVGP---DLSGFATPHGREKL 333
>pdb|2PMT|A Chain A, Glutathione Transferase From Proteus Mirabilis
pdb|2PMT|B Chain B, Glutathione Transferase From Proteus Mirabilis
pdb|2PMT|C Chain C, Glutathione Transferase From Proteus Mirabilis
pdb|2PMT|D Chain D, Glutathione Transferase From Proteus Mirabilis
pdb|1PMT|A Chain A, Glutathione Transferase From Proteus Mirabilis
Length = 203
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 58/121 (47%), Gaps = 14/121 (11%)
Query: 201 RATVPMLWDVDNKDVACNESYDIIQFFNSGLNRSARNPDLDL-AP---VELKGKIEEWNK 256
+ VP+L +DN D+ E I+Q+ + PD +L AP +E +IE W
Sbjct: 49 KGQVPVL-QLDNGDI-LTEGVAIVQYL------ADLKPDRNLIAPPKALERYHQIE-WLN 99
Query: 257 IIYPNVNNGVYRCGFAQSQEAYDTAV-NDLFSKLDMIDDHLGGSRYLCGDTLTLADVCLF 315
+ V+ G + + E+Y V N L SK I+D L + +CGD T+AD LF
Sbjct: 100 FLASEVHKGYSPLFSSDTPESYLPVVKNKLKSKFVYINDVLSKQKCVCGDHFTVADAYLF 159
Query: 316 T 316
T
Sbjct: 160 T 160
>pdb|1AW9|A Chain A, Structure Of Glutathione S-Transferase Iii In Apo Form
Length = 216
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 10/73 (13%)
Query: 249 GKIEEWNKI----IYPNVNNGVYRC------GFAQSQEAYDTAVNDLFSKLDMIDDHLGG 298
K+E W ++ YPN + V++ G A D L LD+ + HL
Sbjct: 93 AKLEVWLEVESHHFYPNASPLVFQLLVRPLLGGAPDAAVVDKHAEQLAKVLDVYEAHLAR 152
Query: 299 SRYLCGDTLTLAD 311
++YL GD TLAD
Sbjct: 153 NKYLAGDEFTLAD 165
>pdb|1A0F|A Chain A, Crystal Structure Of Glutathione S-Transferase From
Escherichia Coli Complexed With Glutathionesulfonic Acid
pdb|1A0F|B Chain B, Crystal Structure Of Glutathione S-Transferase From
Escherichia Coli Complexed With Glutathionesulfonic Acid
pdb|1N2A|A Chain A, Crystal Structure Of A Bacterial Glutathione Transferase
From Escherichia Coli With Glutathione Sulfonate In The
Active Site
pdb|1N2A|B Chain B, Crystal Structure Of A Bacterial Glutathione Transferase
From Escherichia Coli With Glutathione Sulfonate In The
Active Site
Length = 201
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 49/117 (41%), Gaps = 11/117 (9%)
Query: 242 LAPVEL--KGKIEEWNKIIYPNVNNGVYRCGFAQSQEAYDTAVN-DLFSKLDMIDDHLGG 298
LAPV + K EW I ++ G + E Y V L KL +++ L
Sbjct: 83 LAPVNSISRYKTIEWLNYIATELHKGFTPLFRPDTPEEYKPTVRAQLEKKLQYVNEALKD 142
Query: 299 SRYLCGDTLTLADVCLFTTLIRFDLVYNVLFKCTKKKLLEYPNLHGYMREIYQIPEV 355
++CG T+AD LFT L Y V K L ++ +M+ + + PEV
Sbjct: 143 EHWICGQRFTIADAYLFTVL---RWAYAV-----KLNLEGLEHIAAFMQRMAERPEV 191
>pdb|1JLV|A Chain A, Anopheles Dirus Species B Glutathione S-transferases 1-3
pdb|1JLV|B Chain B, Anopheles Dirus Species B Glutathione S-transferases 1-3
pdb|1JLV|C Chain C, Anopheles Dirus Species B Glutathione S-transferases 1-3
pdb|1JLV|D Chain D, Anopheles Dirus Species B Glutathione S-transferases 1-3
pdb|1JLV|E Chain E, Anopheles Dirus Species B Glutathione S-transferases 1-3
pdb|1JLV|F Chain F, Anopheles Dirus Species B Glutathione S-transferases 1-3
Length = 209
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 24/36 (66%)
Query: 289 LDMIDDHLGGSRYLCGDTLTLADVCLFTTLIRFDLV 324
+D ++ L G +Y+ GD+LT+AD+ + T+ +D+
Sbjct: 134 VDFLNTFLDGHKYVAGDSLTIADLTVLATVSTYDVA 169
>pdb|3EIN|A Chain A, Delta Class Gst
pdb|3MAK|A Chain A, Crystal Structure Of Glutathione Transferase Dmgstd1 From
Drosophila Melanogaster, In Complex With Glutathione
Length = 209
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 258 IYPNVNNGVYRCGFAQSQEAYDTAVNDLFSKLDMIDDHLGGSRYLCGDTLTLADVCLFTT 317
+Y + N Y FA++ A A + + + ++ L G Y GD+LT+AD+ L T
Sbjct: 105 LYQSFANYYYPQVFAKAP-ADPEAFKKIEAAFEFLNTFLEGQDYAAGDSLTVADIALVAT 163
Query: 318 LIRFDLV 324
+ F++
Sbjct: 164 VSTFEVA 170
>pdb|4IKH|A Chain A, Crystal Structure Of A Glutathione Transferase Family
Member From Psuedomonas Fluorescens Pf-5, Target
Efi-900003, With Two Glutathione Bound
Length = 244
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 282 VNDLFSKLDMIDDHLGGSRYLCGDTLTLADVCLF 315
VN+ L ++D HLGG ++ G+ T+AD+ F
Sbjct: 156 VNEAKRLLGVLDKHLGGREWIXGERYTIADIATF 189
>pdb|4HZ2|A Chain A, Crystal Structure Of Glutathione S-Transferase Xaut_3756
(Target Efi- 507152) From Xanthobacter Autotrophicus Py2
pdb|4HZ2|B Chain B, Crystal Structure Of Glutathione S-Transferase Xaut_3756
(Target Efi- 507152) From Xanthobacter Autotrophicus Py2
Length = 230
Score = 32.0 bits (71), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 16/69 (23%), Positives = 33/69 (47%), Gaps = 8/69 (11%)
Query: 287 SKLDMIDDHLGGSRYLCGDTLTLADVCLFTTLIRFDLVYNVLFKCTKKKLLEYPNLHGYM 346
+ LD+++ HL G +L G+ T+AD+ LF Y + L ++P + ++
Sbjct: 156 AALDVMEQHLAGEPWLVGEGPTIADLALFA--------YTHRAEEADFDLAQWPAVLAWV 207
Query: 347 REIYQIPEV 355
+ +P +
Sbjct: 208 DRVAALPGI 216
>pdb|4ECI|A Chain A, Crystal Structure Of Glutathione S-Transferase Prk13972
(Target Efi- 501853) From Pseudomonas Aeruginosa Pacs2
Complexed With Acetate
pdb|4ECI|B Chain B, Crystal Structure Of Glutathione S-Transferase Prk13972
(Target Efi- 501853) From Pseudomonas Aeruginosa Pacs2
Complexed With Acetate
pdb|4ECJ|A Chain A, Crystal Structure Of Glutathione S-Transferase Prk13972
(Target Efi- 501853) From Pseudomonas Aeruginosa Pacs2
Complexed With Glutathione
pdb|4ECJ|B Chain B, Crystal Structure Of Glutathione S-Transferase Prk13972
(Target Efi- 501853) From Pseudomonas Aeruginosa Pacs2
Complexed With Glutathione
Length = 244
Score = 32.0 bits (71), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 51/120 (42%), Gaps = 17/120 (14%)
Query: 204 VPMLWDVDNKDVACNESYDIIQFFNSGLNRSARNPDLDLAPVELKGK--IEEWNKIIYPN 261
+P + D DN D A ES I+ + + L P ++KG+ + +W
Sbjct: 54 IPAIVDRDNDDFAVFESGAILIYLAEKTGQ--------LMPADVKGRSRVIQWLMFQMGG 105
Query: 262 VN------NGVYRCGFAQSQEAYDTAVNDLFSKLDMIDDHLGGSRYLCGDTLTLADVCLF 315
V N +R + Q A D ++ +++D LG + YL GD ++AD+ +
Sbjct: 106 VGPMQGQANVFFRYFPEKLQGAIDRYQHETRRLYEVLDGRLGEAEYLAGD-YSIADIATY 164
>pdb|1MPP|A Chain A, X-Ray Analyses Of Aspartic Proteinases. V. Structure And
Refinement At 2.0 Angstroms Resolution Of The Aspartic
Proteinase From Mucor Pusillus
Length = 361
Score = 31.6 bits (70), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Query: 143 EDAVPVSIAGPGQDGSWEFTNNRNPSRDKDIPVPGLDNENGC 184
E A+PVSI PGQD F S D +P G DN GC
Sbjct: 19 EYAIPVSIGTPGQDFYLLFDTG---SSDTWVPHKGCDNSEGC 57
>pdb|2HNL|A Chain A, Structure Of The Prostaglandin D Synthase From The
Parasitic Nematode Onchocerca Volvulus
pdb|2HNL|B Chain B, Structure Of The Prostaglandin D Synthase From The
Parasitic Nematode Onchocerca Volvulus
Length = 225
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 9/55 (16%)
Query: 301 YLCGDTLTLADVCLFTTLIRFDLVYNVLFKCTKKKLLEYPNLHGYMREIYQIPEV 355
++ G+ +++AD+ +F L+ D + KL EYP L ++ +I Q+P +
Sbjct: 168 HIVGNKVSVADLTVFNMLMTLD---------DEVKLEEYPQLASFVNKIGQMPGI 213
>pdb|2DSA|A Chain A, Ternary Complex Of Bphk, A Bacterial Gst
pdb|2DSA|B Chain B, Ternary Complex Of Bphk, A Bacterial Gst
pdb|2DSA|C Chain C, Ternary Complex Of Bphk, A Bacterial Gst
pdb|2DSA|D Chain D, Ternary Complex Of Bphk, A Bacterial Gst
Length = 203
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 24/47 (51%)
Query: 272 AQSQEAYDTAVNDLFSKLDMIDDHLGGSRYLCGDTLTLADVCLFTTL 318
A S E + L ++L + L + YL GD L++AD+ LF L
Sbjct: 116 ASSDEWKNAVRQSLNTRLGQVARQLEHAPYLLGDQLSVADIYLFVVL 162
>pdb|2GDR|A Chain A, Crystal Structure Of A Bacterial Glutathione Transferase
pdb|2GDR|B Chain B, Crystal Structure Of A Bacterial Glutathione Transferase
pdb|2GDR|C Chain C, Crystal Structure Of A Bacterial Glutathione Transferase
pdb|2GDR|D Chain D, Crystal Structure Of A Bacterial Glutathione Transferase
pdb|2GDR|E Chain E, Crystal Structure Of A Bacterial Glutathione Transferase
pdb|2GDR|F Chain F, Crystal Structure Of A Bacterial Glutathione Transferase
Length = 202
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 24/47 (51%)
Query: 272 AQSQEAYDTAVNDLFSKLDMIDDHLGGSRYLCGDTLTLADVCLFTTL 318
A S E + L ++L + L + YL GD L++AD+ LF L
Sbjct: 116 ASSDEWKNAVRQSLNTRLGQVARQLEHAPYLLGDQLSVADIYLFVVL 162
>pdb|1BYE|A Chain A, Glutathione S-Transferase I From Mais In Complex With
Atrazine Glutathione Conjugate
pdb|1BYE|B Chain B, Glutathione S-Transferase I From Mais In Complex With
Atrazine Glutathione Conjugate
pdb|1BYE|C Chain C, Glutathione S-Transferase I From Mais In Complex With
Atrazine Glutathione Conjugate
pdb|1BYE|D Chain D, Glutathione S-Transferase I From Mais In Complex With
Atrazine Glutathione Conjugate
Length = 213
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 7/55 (12%)
Query: 270 GFAQSQEAYDTAVNDLFSKLDMIDDHLGGSRYLCGDTLTLAD-------VCLFTT 317
G Q+ D + L L++ + L +YL GD L+LAD +CLF T
Sbjct: 123 GGTTDQKVVDENLEKLKKVLEVYEARLTKCKYLAGDFLSLADLNHVSVTLCLFAT 177
>pdb|2UZ8|A Chain A, The Crystal Structure Of P18, Human Translation Elongation
Factor 1 Epsilon 1
pdb|2UZ8|B Chain B, The Crystal Structure Of P18, Human Translation Elongation
Factor 1 Epsilon 1
Length = 174
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 280 TAVNDLFSKLDMIDDHLGGSRYLCGDTLTLADVCLFTTLIRF 321
++ ND+ + L ++ +L YL G TLAD+ L+ L RF
Sbjct: 86 SSKNDIHTLLXDLNSYLEDKVYLTGYNFTLADILLYYGLHRF 127
>pdb|1V2A|A Chain A, Glutathione S-transferase 1-6 From Anopheles Dirus Species
B
pdb|1V2A|B Chain B, Glutathione S-transferase 1-6 From Anopheles Dirus Species
B
pdb|1V2A|C Chain C, Glutathione S-transferase 1-6 From Anopheles Dirus Species
B
pdb|1V2A|D Chain D, Glutathione S-transferase 1-6 From Anopheles Dirus Species
B
Length = 210
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/77 (20%), Positives = 35/77 (45%), Gaps = 8/77 (10%)
Query: 273 QSQEAYDTAVNDLFSKLDMIDDHLGGSRYLCGDTLTLADVCLFTTLIRFDLVYNVLFKCT 332
+ ++ D + L LD+++ + Y D LT+AD+CL T+ + +
Sbjct: 116 KKEQPSDEQMEKLKGALDLLEQFVTERAYAAADHLTVADICLLGTVTALNWL-------- 167
Query: 333 KKKLLEYPNLHGYMREI 349
K L +P++ ++ +
Sbjct: 168 KHDLEPFPHIRAWLERV 184
>pdb|1AXD|A Chain A, Structure Of Glutathione S-transferase-i Bound With The
Ligand Lactoylglutathione
pdb|1AXD|B Chain B, Structure Of Glutathione S-transferase-i Bound With The
Ligand Lactoylglutathione
Length = 209
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 7/55 (12%)
Query: 270 GFAQSQEAYDTAVNDLFSKLDMIDDHLGGSRYLCGDTLTLAD-------VCLFTT 317
G Q+ D + L L++ + L +YL GD L+LAD +CLF T
Sbjct: 123 GGTTDQKVVDENLEKLKKVLEVYEARLTKCKYLAGDFLSLADLNHVSVTLCLFAT 177
>pdb|4G9H|A Chain A, Crystal Structure Of Glutahtione S-Transferase Homolog
From Yersinia Pestis, Target Efi-501894, With Bound
Glutathione
pdb|4G9H|B Chain B, Crystal Structure Of Glutahtione S-Transferase Homolog
From Yersinia Pestis, Target Efi-501894, With Bound
Glutathione
pdb|4GCI|A Chain A, Crystal Structure Of Glutahtione S-Transferase Homolog
From Yersinia Pestis, Target Efi-501894, With Bound
Glutathione, Monoclinic Form
pdb|4GCI|B Chain B, Crystal Structure Of Glutahtione S-Transferase Homolog
From Yersinia Pestis, Target Efi-501894, With Bound
Glutathione, Monoclinic Form
Length = 211
Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 42/108 (38%), Gaps = 9/108 (8%)
Query: 253 EWNKIIYPNVNNGVYRCGFAQSQEAYDTAVNDLFSK-LDMIDDHLGGSRYLCGDTLTLAD 311
EW I ++ G + + Y T V + K +D L YL G ++AD
Sbjct: 99 EWLNFIATELHKGFSPLFNPNTPDEYKTIVRERLDKQFSYVDSVLAEHDYLLGKKFSVAD 158
Query: 312 VCLFTTLIRFDLVYNVLFKCTKKKLLEYPNLHGYMREIYQIPEVAATC 359
LF T+ R+ N+ K E +L YM + + P V A
Sbjct: 159 AYLF-TVSRWANALNLQIK-------ERSHLDQYMARVAERPAVKAAL 198
>pdb|1GSQ|A Chain A, Three-Dimensional Structure, Catalytic Properties And
Evolution Of A Sigma Class Glutathione Transferase From
Squid, A Progenitor Of The Lens-Crystallins Of
Cephalopods
pdb|2GSQ|A Chain A, Glutathione S-Transferase From Squid Digestive Gland
Complexed With S- (3-Iodobenzyl)glutathione
Length = 202
Score = 28.9 bits (63), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 15/130 (11%)
Query: 235 ARNPDLDLAPVELKGKIEEWNKIIYPNVNNGVYRCGFAQS------QEAYDTAVNDLFSK 288
AR LD K +++E + + ++ N V + FA Q+ Y+ + L
Sbjct: 71 AREFGLDGKTSLEKYRVDEITETL-QDIFNDVVKIKFAPEAAKEAVQQNYEKSCKRLAPF 129
Query: 289 LD-MIDDHLGGSRYLCGDTLTLADVCLFTTLIRFDLVYNVLFKCTKKKLLEYPNLHGYMR 347
L+ ++ + GG + G+++TLAD+ + L V K T + L + P + +
Sbjct: 130 LEGLLVSNGGGDGFFVGNSMTLADLHCYVAL-------EVPLKHTPELLKDCPKIVALRK 182
Query: 348 EIYQIPEVAA 357
+ + P++AA
Sbjct: 183 RVAECPKIAA 192
>pdb|1GNW|A Chain A, Structure Of Glutathione S-Transferase
pdb|1GNW|B Chain B, Structure Of Glutathione S-Transferase
pdb|1BX9|A Chain A, Glutathione S-Transferase In Complex With Herbicide
Length = 211
Score = 28.9 bits (63), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 8/99 (8%)
Query: 255 NKIIYPNVNNGVYRCGFAQSQEAYDTAVNDLFSKLDMIDDHLGGSRYLCGDTLTLADVCL 314
+K+ + + +Y G + L LD+ + L +YL G+T TL D
Sbjct: 115 SKLAFEQIFKSIY--GLTTDEAVVAEEEAKLAKVLDVYEARLKEFKYLAGETFTLTD--- 169
Query: 315 FTTLIRFDLVYNVLFKCTKKKLLEYPNLHGYMREIYQIP 353
L + +L TKK E P ++ ++ EI + P
Sbjct: 170 ---LHHIPAIQYLLGTPTKKLFTERPRVNEWVAEITKRP 205
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.137 0.428
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,489,166
Number of Sequences: 62578
Number of extensions: 537024
Number of successful extensions: 969
Number of sequences better than 100.0: 27
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 944
Number of HSP's gapped (non-prelim): 28
length of query: 414
length of database: 14,973,337
effective HSP length: 101
effective length of query: 313
effective length of database: 8,652,959
effective search space: 2708376167
effective search space used: 2708376167
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)