Query 015035
Match_columns 414
No_of_seqs 393 out of 2468
Neff 5.9
Searched_HMMs 29240
Date Mon Mar 25 05:31:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015035.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015035hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2h00_A Methyltransferase 10 do 100.0 7.2E-38 2.5E-42 296.3 22.3 242 48-345 2-253 (254)
2 3evz_A Methyltransferase; NYSG 99.9 2.6E-26 9E-31 212.9 20.2 214 51-345 5-220 (230)
3 2b3t_A Protein methyltransfera 99.9 1.7E-25 5.6E-30 215.1 19.3 193 71-342 76-274 (276)
4 1nv8_A HEMK protein; class I a 99.9 1.4E-25 4.8E-30 218.5 15.7 186 70-342 88-280 (284)
5 4dzr_A Protein-(glutamine-N5) 99.9 1E-23 3.5E-28 191.0 6.7 195 77-344 1-205 (215)
6 3lpm_A Putative methyltransfer 99.7 1.4E-17 4.8E-22 158.3 14.4 149 116-327 50-198 (259)
7 2ozv_A Hypothetical protein AT 99.7 2.8E-17 9.7E-22 157.2 13.3 170 116-345 37-212 (260)
8 3q87_B N6 adenine specific DNA 99.7 7.6E-16 2.6E-20 137.8 15.7 155 82-338 2-156 (170)
9 1o54_A SAM-dependent O-methylt 99.6 6.6E-15 2.2E-19 141.0 16.9 171 68-334 58-243 (277)
10 3tm4_A TRNA (guanine N2-)-meth 99.6 9.2E-14 3.1E-18 139.9 19.9 140 116-335 218-357 (373)
11 3p9n_A Possible methyltransfer 99.6 3.4E-14 1.2E-18 128.0 14.4 94 71-176 9-102 (189)
12 2fhp_A Methylase, putative; al 99.6 6.7E-15 2.3E-19 130.8 9.5 95 70-176 9-103 (187)
13 3tma_A Methyltransferase; thum 99.6 5.9E-14 2E-18 139.6 16.1 143 116-338 204-347 (354)
14 1dus_A MJ0882; hypothetical pr 99.5 1.9E-13 6.6E-18 121.0 17.6 161 76-333 24-185 (194)
15 1yzh_A TRNA (guanine-N(7)-)-me 99.5 5.4E-14 1.8E-18 129.3 14.2 143 116-332 42-184 (214)
16 4dcm_A Ribosomal RNA large sub 99.5 2.7E-13 9.1E-18 137.1 16.7 120 116-314 223-344 (375)
17 1ws6_A Methyltransferase; stru 99.5 7.6E-14 2.6E-18 122.0 10.7 92 69-176 6-97 (171)
18 2igt_A SAM dependent methyltra 99.5 2.6E-13 8.9E-18 135.0 15.9 173 72-323 116-297 (332)
19 3gnl_A Uncharacterized protein 99.5 1.3E-13 4.6E-18 132.1 12.2 124 116-326 22-145 (244)
20 3lec_A NADB-rossmann superfami 99.5 2E-13 6.8E-18 129.9 12.5 124 116-326 22-145 (230)
21 3kr9_A SAM-dependent methyltra 99.5 1.7E-13 5.7E-18 129.9 12.0 123 117-326 17-139 (225)
22 1o9g_A RRNA methyltransferase; 99.5 6.8E-14 2.3E-18 131.8 9.1 48 115-162 51-100 (250)
23 1uwv_A 23S rRNA (uracil-5-)-me 99.5 5.3E-13 1.8E-17 137.0 16.4 91 74-177 253-344 (433)
24 3eey_A Putative rRNA methylase 99.5 1E-12 3.5E-17 118.4 16.0 116 116-304 23-139 (197)
25 3dmg_A Probable ribosomal RNA 99.5 7.4E-13 2.5E-17 134.2 16.7 153 75-316 198-352 (381)
26 2esr_A Methyltransferase; stru 99.5 3.1E-13 1.1E-17 119.8 11.9 88 77-176 3-90 (177)
27 2frn_A Hypothetical protein PH 99.5 1E-12 3.6E-17 126.7 16.0 120 116-324 126-251 (278)
28 3grz_A L11 mtase, ribosomal pr 99.4 3.1E-12 1E-16 116.2 17.1 123 116-329 61-184 (205)
29 1jsx_A Glucose-inhibited divis 99.4 5.7E-13 2E-17 120.8 12.2 142 89-328 45-186 (207)
30 3mti_A RRNA methylase; SAM-dep 99.4 1.5E-12 5.1E-17 116.2 14.7 145 94-321 8-157 (185)
31 3e05_A Precorrin-6Y C5,15-meth 99.4 3.3E-12 1.1E-16 116.1 17.0 128 115-330 40-167 (204)
32 2b78_A Hypothetical protein SM 99.4 1.6E-12 5.4E-17 131.6 15.7 133 116-319 213-347 (385)
33 2fpo_A Methylase YHHF; structu 99.4 8.2E-13 2.8E-17 121.1 12.0 93 71-176 20-112 (202)
34 1l3i_A Precorrin-6Y methyltran 99.4 4.6E-12 1.6E-16 111.9 16.1 145 85-328 13-157 (192)
35 3g89_A Ribosomal RNA small sub 99.4 1.3E-12 4.3E-17 124.6 13.1 146 115-345 80-229 (249)
36 2ift_A Putative methylase HI07 99.4 8.5E-13 2.9E-17 121.0 11.1 94 71-176 19-113 (201)
37 2yx1_A Hypothetical protein MJ 99.4 3.4E-12 1.2E-16 126.7 16.2 134 116-346 196-333 (336)
38 2yxd_A Probable cobalt-precorr 99.4 5.9E-12 2E-16 110.6 16.0 149 77-328 3-154 (183)
39 1wy7_A Hypothetical protein PH 99.4 2.9E-12 1E-16 116.3 14.0 120 116-324 50-169 (207)
40 3dlc_A Putative S-adenosyl-L-m 99.4 2.2E-12 7.5E-17 116.6 13.1 58 117-176 45-102 (219)
41 2fca_A TRNA (guanine-N(7)-)-me 99.4 2.7E-12 9.1E-17 118.8 12.9 140 116-331 39-180 (213)
42 3mb5_A SAM-dependent methyltra 99.4 4.2E-12 1.5E-16 119.1 14.0 128 115-331 93-223 (255)
43 2pt6_A Spermidine synthase; tr 99.4 7.4E-12 2.5E-16 123.9 15.8 172 71-329 80-258 (321)
44 3njr_A Precorrin-6Y methylase; 99.4 5.2E-11 1.8E-15 109.5 20.2 121 116-326 56-176 (204)
45 2nxc_A L11 mtase, ribosomal pr 99.4 5E-12 1.7E-16 120.3 13.1 122 116-329 121-243 (254)
46 1xdz_A Methyltransferase GIDB; 99.3 8.5E-12 2.9E-16 116.8 14.1 131 116-331 71-203 (240)
47 2pjd_A Ribosomal RNA small sub 99.3 1.2E-11 4E-16 122.7 15.5 150 74-316 166-315 (343)
48 3gdh_A Trimethylguanosine synt 99.3 9.2E-12 3.2E-16 115.8 13.9 149 116-339 79-227 (241)
49 3a27_A TYW2, uncharacterized p 99.3 2.4E-11 8.1E-16 117.0 17.0 89 72-176 88-178 (272)
50 2yvl_A TRMI protein, hypotheti 99.3 2.1E-11 7.1E-16 113.3 15.7 126 115-331 91-216 (248)
51 4fsd_A Arsenic methyltransfera 99.3 7.9E-12 2.7E-16 125.7 13.7 139 115-329 83-250 (383)
52 1nkv_A Hypothetical protein YJ 99.3 3.5E-11 1.2E-15 112.3 17.0 77 89-176 19-95 (256)
53 3ocj_A Putative exported prote 99.3 1.4E-11 4.9E-16 119.3 14.8 61 115-176 118-179 (305)
54 3ldu_A Putative methylase; str 99.3 1.5E-11 5.1E-16 124.7 15.5 60 116-176 196-293 (385)
55 3ldg_A Putative uncharacterize 99.3 2.6E-11 8.9E-16 123.1 17.2 61 116-177 195-293 (384)
56 3hm2_A Precorrin-6Y C5,15-meth 99.3 2.2E-11 7.5E-16 107.1 14.5 123 116-325 26-148 (178)
57 3kkz_A Uncharacterized protein 99.3 2.9E-11 1E-15 114.2 16.4 60 115-176 46-105 (267)
58 3f4k_A Putative methyltransfer 99.3 5.7E-11 2E-15 110.9 17.9 59 116-176 47-105 (257)
59 3k0b_A Predicted N6-adenine-sp 99.3 1.6E-11 5.5E-16 124.9 15.2 60 116-176 202-299 (393)
60 3v97_A Ribosomal RNA large sub 99.3 5.8E-12 2E-16 137.0 12.5 135 116-323 540-675 (703)
61 2f8l_A Hypothetical protein LM 99.3 7.4E-12 2.5E-16 124.1 12.1 136 116-322 131-278 (344)
62 3k6r_A Putative transferase PH 99.3 3.2E-11 1.1E-15 117.5 16.2 60 116-177 126-185 (278)
63 3c0k_A UPF0064 protein YCCW; P 99.3 2.1E-11 7.3E-16 123.2 15.2 137 116-323 221-363 (396)
64 2qm3_A Predicted methyltransfe 99.3 2.5E-11 8.7E-16 121.8 15.4 132 116-331 173-310 (373)
65 2ih2_A Modification methylase 99.3 3.7E-12 1.3E-16 128.2 8.3 137 116-322 40-186 (421)
66 3adn_A Spermidine synthase; am 99.3 4.3E-11 1.5E-15 117.2 15.4 172 72-329 48-226 (294)
67 4dmg_A Putative uncharacterize 99.3 2E-11 6.8E-16 124.3 13.4 131 116-323 215-350 (393)
68 3dtn_A Putative methyltransfer 99.3 1.6E-10 5.5E-15 106.5 17.6 59 115-177 44-102 (234)
69 3dxy_A TRNA (guanine-N(7)-)-me 99.3 1.3E-11 4.5E-16 115.2 10.4 131 116-321 35-167 (218)
70 4gek_A TRNA (CMO5U34)-methyltr 99.3 1.9E-10 6.4E-15 110.4 18.7 61 116-177 71-133 (261)
71 3bzb_A Uncharacterized protein 99.3 3.2E-11 1.1E-15 116.3 13.1 110 35-175 26-147 (281)
72 1wxx_A TT1595, hypothetical pr 99.3 2.7E-11 9.1E-16 122.0 12.9 134 117-323 211-349 (382)
73 1yb2_A Hypothetical protein TA 99.3 3.7E-11 1.3E-15 115.0 13.2 128 115-332 110-239 (275)
74 2pwy_A TRNA (adenine-N(1)-)-me 99.3 1.5E-10 5.3E-15 108.0 16.7 128 115-331 96-225 (258)
75 1xj5_A Spermidine synthase 1; 99.3 5.5E-11 1.9E-15 118.5 14.4 98 70-176 83-183 (334)
76 3dh0_A SAM dependent methyltra 99.2 1.7E-10 5.9E-15 105.0 16.5 131 116-330 38-181 (219)
77 2as0_A Hypothetical protein PH 99.2 2.6E-11 9E-16 122.4 11.5 115 116-301 218-332 (396)
78 3jwg_A HEN1, methyltransferase 99.2 1.1E-10 3.7E-15 106.8 14.5 73 94-176 17-93 (219)
79 3e23_A Uncharacterized protein 99.2 8.5E-10 2.9E-14 100.2 19.6 137 116-343 44-199 (211)
80 3jwh_A HEN1; methyltransferase 99.2 1.2E-10 4.2E-15 106.4 13.8 75 92-176 15-93 (217)
81 3sm3_A SAM-dependent methyltra 99.2 2.7E-10 9.3E-15 104.1 15.7 58 116-176 31-92 (235)
82 1ixk_A Methyltransferase; open 99.2 1.3E-10 4.3E-15 114.4 14.3 148 115-324 118-269 (315)
83 3v97_A Ribosomal RNA large sub 99.2 4.9E-10 1.7E-14 121.8 19.9 79 89-177 173-293 (703)
84 1ve3_A Hypothetical protein PH 99.2 4.2E-10 1.4E-14 102.6 16.4 56 116-176 39-94 (227)
85 1ne2_A Hypothetical protein TA 99.2 1.2E-10 4.2E-15 105.3 12.7 53 116-176 52-104 (200)
86 3bus_A REBM, methyltransferase 99.2 6E-10 2.1E-14 105.0 17.9 60 115-176 61-120 (273)
87 1y8c_A S-adenosylmethionine-de 99.2 5.5E-10 1.9E-14 102.7 16.9 72 93-176 22-93 (246)
88 3hem_A Cyclopropane-fatty-acyl 99.2 5.6E-10 1.9E-14 107.6 17.6 60 115-176 72-131 (302)
89 3bwc_A Spermidine synthase; SA 99.2 3E-10 1E-14 111.2 15.8 175 72-330 60-240 (304)
90 3lcc_A Putative methyl chlorid 99.2 1.5E-10 5.2E-15 107.1 12.8 131 117-331 68-208 (235)
91 4htf_A S-adenosylmethionine-de 99.2 3.8E-10 1.3E-14 107.6 15.9 58 116-176 69-126 (285)
92 3gu3_A Methyltransferase; alph 99.2 2.9E-10 9.8E-15 109.0 14.9 59 115-176 22-81 (284)
93 1inl_A Spermidine synthase; be 99.2 1.5E-10 5.3E-15 112.9 13.1 171 72-328 55-232 (296)
94 3mgg_A Methyltransferase; NYSG 99.2 3.5E-10 1.2E-14 107.0 15.1 60 115-176 37-96 (276)
95 3ajd_A Putative methyltransfer 99.2 1.5E-10 5E-15 111.3 12.6 145 115-321 83-231 (274)
96 3m6w_A RRNA methylase; rRNA me 99.2 1.6E-10 5.4E-15 120.1 13.6 145 115-321 101-249 (464)
97 3b3j_A Histone-arginine methyl 99.2 1.5E-11 5.3E-16 128.1 5.8 93 71-177 125-217 (480)
98 3g2m_A PCZA361.24; SAM-depende 99.2 3.9E-10 1.3E-14 108.5 15.2 58 117-177 84-143 (299)
99 3m33_A Uncharacterized protein 99.2 2.6E-10 9E-15 105.6 13.3 117 116-328 49-165 (226)
100 3vc1_A Geranyl diphosphate 2-C 99.2 5.1E-10 1.7E-14 108.7 15.9 61 115-177 117-177 (312)
101 2ipx_A RRNA 2'-O-methyltransfe 99.2 5.5E-10 1.9E-14 103.7 15.5 57 116-176 78-135 (233)
102 1i9g_A Hypothetical protein RV 99.2 3.7E-10 1.3E-14 107.2 14.5 129 116-331 100-231 (280)
103 3cgg_A SAM-dependent methyltra 99.2 8.1E-10 2.8E-14 97.6 15.7 127 116-330 47-175 (195)
104 3ujc_A Phosphoethanolamine N-m 99.1 7.6E-10 2.6E-14 103.2 15.8 131 115-330 55-206 (266)
105 2okc_A Type I restriction enzy 99.1 3.3E-10 1.1E-14 116.3 14.4 61 115-176 171-245 (445)
106 1vl5_A Unknown conserved prote 99.1 1.7E-09 5.7E-14 101.6 17.2 58 115-176 37-94 (260)
107 3ntv_A MW1564 protein; rossman 99.1 3.8E-10 1.3E-14 105.3 12.7 60 116-176 72-131 (232)
108 2o57_A Putative sarcosine dime 99.1 1.5E-09 5E-14 104.0 17.0 60 115-176 82-141 (297)
109 3d2l_A SAM-dependent methyltra 99.1 1.6E-09 5.4E-14 99.8 16.5 54 117-176 35-88 (243)
110 3tr6_A O-methyltransferase; ce 99.1 2.8E-10 9.6E-15 104.4 11.3 60 116-176 65-125 (225)
111 3m4x_A NOL1/NOP2/SUN family pr 99.1 2E-10 6.7E-15 119.2 11.3 148 115-323 105-256 (456)
112 2vdv_E TRNA (guanine-N(7)-)-me 99.1 3.8E-10 1.3E-14 106.1 12.2 60 116-177 50-117 (246)
113 3bt7_A TRNA (uracil-5-)-methyl 99.1 1.7E-10 5.8E-15 115.8 10.2 88 75-176 182-270 (369)
114 1fbn_A MJ fibrillarin homologu 99.1 2.8E-09 9.6E-14 99.0 17.6 57 116-176 75-131 (230)
115 3duw_A OMT, O-methyltransferas 99.1 4E-10 1.4E-14 103.5 11.3 60 116-176 59-119 (223)
116 2ex4_A Adrenal gland protein A 99.1 1.4E-09 4.6E-14 101.2 15.0 133 115-330 79-225 (241)
117 1iy9_A Spermidine synthase; ro 99.1 1E-09 3.4E-14 106.0 14.5 135 116-329 76-217 (275)
118 3g07_A 7SK snRNA methylphospha 99.1 4.7E-10 1.6E-14 108.5 12.2 47 116-162 47-93 (292)
119 3dr5_A Putative O-methyltransf 99.1 5.2E-10 1.8E-14 104.5 12.0 59 117-176 58-118 (221)
120 2b2c_A Spermidine synthase; be 99.1 7.2E-10 2.5E-14 109.5 13.6 171 72-328 73-249 (314)
121 3m70_A Tellurite resistance pr 99.1 2.4E-09 8.4E-14 102.0 16.6 56 116-176 121-176 (286)
122 3g5l_A Putative S-adenosylmeth 99.1 8.4E-10 2.9E-14 103.0 13.0 56 115-176 44-99 (253)
123 3h2b_A SAM-dependent methyltra 99.1 3.3E-09 1.1E-13 95.6 16.4 132 116-337 42-188 (203)
124 3u81_A Catechol O-methyltransf 99.1 1.6E-09 5.5E-14 99.9 14.6 60 116-176 59-119 (221)
125 1ri5_A MRNA capping enzyme; me 99.1 2.1E-09 7.3E-14 102.0 15.8 60 116-177 65-124 (298)
126 2fk8_A Methoxy mycolic acid sy 99.1 2E-09 6.8E-14 104.3 15.4 60 115-176 90-149 (318)
127 3l8d_A Methyltransferase; stru 99.1 2.4E-09 8.2E-14 98.7 15.2 129 116-333 54-203 (242)
128 3tfw_A Putative O-methyltransf 99.1 8.8E-10 3E-14 104.1 12.3 60 116-176 64-124 (248)
129 1g8a_A Fibrillarin-like PRE-rR 99.1 8.6E-09 2.9E-13 94.9 18.7 57 116-176 74-131 (227)
130 1xtp_A LMAJ004091AAA; SGPP, st 99.1 4.6E-09 1.6E-13 97.6 16.9 130 115-329 93-237 (254)
131 1kpg_A CFA synthase;, cyclopro 99.1 4.7E-09 1.6E-13 99.9 17.4 59 116-176 65-123 (287)
132 2plw_A Ribosomal RNA methyltra 99.1 2.4E-09 8.2E-14 96.3 14.4 159 116-345 23-197 (201)
133 3ckk_A TRNA (guanine-N(7)-)-me 99.1 6.6E-10 2.2E-14 104.9 11.0 132 115-321 46-185 (235)
134 3ofk_A Nodulation protein S; N 99.1 5.7E-09 1.9E-13 94.9 16.7 140 115-341 51-200 (216)
135 2jjq_A Uncharacterized RNA met 99.0 8E-10 2.7E-14 113.5 12.3 88 72-176 258-346 (425)
136 3bkx_A SAM-dependent methyltra 99.0 1.1E-09 3.7E-14 103.4 12.2 60 115-175 43-109 (275)
137 3dou_A Ribosomal RNA large sub 99.0 2.8E-09 9.7E-14 97.3 14.6 156 115-348 25-185 (191)
138 2h1r_A Dimethyladenosine trans 99.0 3.7E-10 1.3E-14 110.3 9.2 57 116-176 43-99 (299)
139 2fyt_A Protein arginine N-meth 99.0 1.4E-09 4.7E-14 108.0 13.5 58 116-176 65-122 (340)
140 3thr_A Glycine N-methyltransfe 99.0 4E-09 1.4E-13 100.5 16.2 73 91-175 42-117 (293)
141 2gpy_A O-methyltransferase; st 99.0 8.3E-10 2.8E-14 102.3 11.0 60 116-176 55-114 (233)
142 2r3s_A Uncharacterized protein 99.0 5.2E-09 1.8E-13 101.8 17.1 61 115-177 165-225 (335)
143 1qzz_A RDMB, aclacinomycin-10- 99.0 6.3E-09 2.1E-13 103.1 17.8 60 115-176 182-241 (374)
144 2frx_A Hypothetical protein YE 99.0 2.2E-09 7.5E-14 111.9 15.1 147 115-322 117-267 (479)
145 2dul_A N(2),N(2)-dimethylguano 99.0 6.2E-10 2.1E-14 112.7 10.6 59 116-176 48-121 (378)
146 2xvm_A Tellurite resistance pr 99.0 5.9E-09 2E-13 92.9 15.6 57 116-176 33-89 (199)
147 2avd_A Catechol-O-methyltransf 99.0 8.4E-10 2.9E-14 101.5 10.3 60 116-176 70-130 (229)
148 3khk_A Type I restriction-modi 99.0 9E-10 3.1E-14 116.5 11.9 152 117-330 246-426 (544)
149 3q7e_A Protein arginine N-meth 99.0 1.7E-09 5.9E-14 107.6 13.3 59 116-177 67-125 (349)
150 3axs_A Probable N(2),N(2)-dime 99.0 7.5E-10 2.6E-14 112.8 10.8 60 116-176 53-114 (392)
151 3pfg_A N-methyltransferase; N, 99.0 4.3E-09 1.5E-13 98.9 15.3 52 116-176 51-102 (263)
152 1xxl_A YCGJ protein; structura 99.0 4.6E-09 1.6E-13 97.8 15.3 58 115-176 21-78 (239)
153 3e8s_A Putative SAM dependent 99.0 1.9E-09 6.5E-14 97.7 12.3 41 116-158 53-93 (227)
154 3tqs_A Ribosomal RNA small sub 99.0 7.6E-10 2.6E-14 106.3 10.1 70 93-177 16-85 (255)
155 2pbf_A Protein-L-isoaspartate 99.0 2.4E-09 8.4E-14 98.4 13.1 94 71-176 47-149 (227)
156 2yxl_A PH0851 protein, 450AA l 99.0 2.9E-09 9.8E-14 109.7 15.1 147 116-323 260-412 (450)
157 2b25_A Hypothetical protein; s 99.0 7.2E-09 2.5E-13 101.8 17.2 120 116-321 106-236 (336)
158 3bkw_A MLL3908 protein, S-aden 99.0 3.8E-09 1.3E-13 97.3 14.4 54 116-176 44-98 (243)
159 1g6q_1 HnRNP arginine N-methyl 99.0 2.7E-09 9.1E-14 105.3 14.2 58 116-176 39-96 (328)
160 2r6z_A UPF0341 protein in RSP 99.0 4.9E-11 1.7E-15 114.7 1.2 58 116-176 84-148 (258)
161 1zq9_A Probable dimethyladenos 99.0 1.1E-09 3.7E-14 106.3 10.4 58 116-176 29-86 (285)
162 3r0q_C Probable protein argini 99.0 2.4E-09 8.2E-14 107.7 13.3 59 115-176 63-121 (376)
163 3g5t_A Trans-aconitate 3-methy 99.0 4.1E-09 1.4E-13 101.4 14.3 63 115-177 36-99 (299)
164 1ej0_A FTSJ; methyltransferase 99.0 5E-09 1.7E-13 90.5 13.3 149 116-344 23-178 (180)
165 3lbf_A Protein-L-isoaspartate 99.0 6.9E-09 2.3E-13 94.1 14.7 58 115-176 77-134 (210)
166 1mjf_A Spermidine synthase; sp 99.0 1.8E-09 6.1E-14 104.4 11.2 132 116-328 76-220 (281)
167 1wzn_A SAM-dependent methyltra 99.0 9.8E-09 3.4E-13 95.5 15.6 72 94-176 26-97 (252)
168 3ou2_A SAM-dependent methyltra 99.0 3.3E-08 1.1E-12 89.3 18.3 53 116-176 47-99 (218)
169 1sqg_A SUN protein, FMU protei 99.0 4.3E-09 1.5E-13 107.6 13.9 146 115-321 246-394 (429)
170 3hnr_A Probable methyltransfer 99.0 8.3E-09 2.8E-13 93.9 14.1 53 116-176 46-98 (220)
171 3r3h_A O-methyltransferase, SA 99.0 5.7E-10 2E-14 105.5 6.6 60 116-176 61-121 (242)
172 2p7i_A Hypothetical protein; p 99.0 9.7E-09 3.3E-13 94.2 14.7 53 116-176 43-95 (250)
173 3gru_A Dimethyladenosine trans 99.0 1.4E-09 4.7E-14 106.8 9.5 56 116-177 51-106 (295)
174 2o07_A Spermidine synthase; st 99.0 4.6E-09 1.6E-13 103.0 13.3 61 115-176 95-158 (304)
175 3ll7_A Putative methyltransfer 99.0 2.8E-10 9.6E-15 116.6 4.8 57 116-176 94-152 (410)
176 3c3y_A Pfomt, O-methyltransfer 99.0 3.3E-09 1.1E-13 99.6 11.6 60 116-176 71-131 (237)
177 3uwp_A Histone-lysine N-methyl 99.0 2E-09 7E-14 110.4 10.9 62 115-177 173-242 (438)
178 1sui_A Caffeoyl-COA O-methyltr 99.0 1.8E-09 6.1E-14 102.4 9.6 60 116-176 80-140 (247)
179 3c3p_A Methyltransferase; NP_9 99.0 2E-09 7E-14 98.1 9.7 60 116-176 57-117 (210)
180 2kw5_A SLR1183 protein; struct 99.0 6.9E-09 2.4E-13 93.4 13.0 54 118-176 32-85 (202)
181 3s1s_A Restriction endonucleas 99.0 3.7E-10 1.3E-14 123.5 5.5 48 116-163 322-374 (878)
182 2ar0_A M.ecoki, type I restric 98.9 3.9E-09 1.3E-13 111.5 13.0 60 116-176 170-251 (541)
183 1tw3_A COMT, carminomycin 4-O- 98.9 1.9E-08 6.3E-13 99.3 16.9 60 115-176 183-242 (360)
184 1x19_A CRTF-related protein; m 98.9 1.7E-08 5.8E-13 99.9 16.6 61 115-177 190-250 (359)
185 3ccf_A Cyclopropane-fatty-acyl 98.9 1.2E-08 4E-13 97.0 15.0 52 116-176 58-109 (279)
186 2pxx_A Uncharacterized protein 98.9 1.2E-08 4.1E-13 91.8 14.1 133 116-322 43-175 (215)
187 2qfm_A Spermine synthase; sper 98.9 4.2E-09 1.4E-13 106.2 12.2 176 72-327 155-339 (364)
188 3gjy_A Spermidine synthase; AP 98.9 4.3E-09 1.5E-13 104.4 12.1 136 116-330 90-228 (317)
189 1zx0_A Guanidinoacetate N-meth 98.9 5.9E-09 2E-13 96.9 12.2 57 116-176 61-117 (236)
190 2hnk_A SAM-dependent O-methylt 98.9 4.7E-09 1.6E-13 97.9 11.6 60 116-176 61-121 (239)
191 2p35_A Trans-aconitate 2-methy 98.9 1.3E-08 4.4E-13 94.8 13.9 55 115-176 33-87 (259)
192 4df3_A Fibrillarin-like rRNA/T 98.9 3E-08 1E-12 94.2 16.5 131 115-330 77-217 (233)
193 3lkd_A Type I restriction-modi 98.9 7.6E-09 2.6E-13 109.4 13.6 62 115-177 221-286 (542)
194 2yxe_A Protein-L-isoaspartate 98.9 1.9E-08 6.5E-13 91.5 14.4 59 116-176 78-137 (215)
195 1pjz_A Thiopurine S-methyltran 98.9 5.6E-09 1.9E-13 95.5 10.9 60 116-177 23-92 (203)
196 1nt2_A Fibrillarin-like PRE-rR 98.9 9.4E-08 3.2E-12 88.3 19.2 57 116-176 58-114 (210)
197 1qam_A ERMC' methyltransferase 98.9 3.3E-09 1.1E-13 100.5 9.4 55 116-176 31-85 (244)
198 2y1w_A Histone-arginine methyl 98.9 7.8E-09 2.7E-13 102.7 12.5 58 116-176 51-108 (348)
199 3fut_A Dimethyladenosine trans 98.9 2.7E-09 9.1E-14 103.5 8.6 53 118-177 49-101 (271)
200 2b9e_A NOL1/NOP2/SUN domain fa 98.9 1.9E-08 6.5E-13 99.1 14.9 145 116-321 103-254 (309)
201 3cbg_A O-methyltransferase; cy 98.9 5.1E-09 1.8E-13 97.7 10.3 60 116-176 73-133 (232)
202 2g72_A Phenylethanolamine N-me 98.9 1.7E-08 5.9E-13 96.5 13.9 46 115-161 71-116 (289)
203 1m6y_A S-adenosyl-methyltransf 98.9 2.4E-09 8.2E-14 105.3 8.0 58 116-176 27-84 (301)
204 1uir_A Polyamine aminopropyltr 98.9 1.1E-08 3.9E-13 100.4 12.8 137 116-327 78-222 (314)
205 1i1n_A Protein-L-isoaspartate 98.9 6.5E-09 2.2E-13 95.5 10.2 60 116-176 78-142 (226)
206 2p8j_A S-adenosylmethionine-de 98.9 1.8E-08 6E-13 90.8 12.8 57 116-176 24-80 (209)
207 3fzg_A 16S rRNA methylase; met 98.9 2.2E-09 7.6E-14 99.7 6.9 55 116-171 50-104 (200)
208 2yqz_A Hypothetical protein TT 98.9 2.3E-08 7.7E-13 93.1 13.9 57 115-176 39-95 (263)
209 3orh_A Guanidinoacetate N-meth 98.9 7.7E-09 2.6E-13 97.0 10.5 57 115-175 60-116 (236)
210 3mcz_A O-methyltransferase; ad 98.9 4.7E-08 1.6E-12 96.1 16.5 60 116-177 180-239 (352)
211 3dli_A Methyltransferase; PSI- 98.9 1.3E-08 4.6E-13 94.4 11.9 41 116-158 42-82 (240)
212 3ege_A Putative methyltransfer 98.9 9.1E-09 3.1E-13 97.2 10.9 52 115-176 34-85 (261)
213 2i62_A Nicotinamide N-methyltr 98.9 8.8E-09 3E-13 96.0 10.3 47 115-162 56-102 (265)
214 4hc4_A Protein arginine N-meth 98.9 5.9E-09 2E-13 105.6 9.7 58 116-176 84-141 (376)
215 3gwz_A MMCR; methyltransferase 98.8 6.8E-08 2.3E-12 96.4 17.2 60 115-176 202-261 (369)
216 1dl5_A Protein-L-isoaspartate 98.8 1.8E-08 6.3E-13 98.5 12.8 59 116-176 76-135 (317)
217 3p2e_A 16S rRNA methylase; met 98.8 5.1E-09 1.8E-13 98.0 8.4 59 116-176 25-87 (225)
218 1jg1_A PIMT;, protein-L-isoasp 98.8 4.8E-08 1.7E-12 90.7 14.5 85 76-176 65-149 (235)
219 3i53_A O-methyltransferase; CO 98.8 1.1E-07 3.7E-12 93.0 17.5 59 116-176 170-228 (332)
220 2a14_A Indolethylamine N-methy 98.8 1E-08 3.5E-13 97.3 9.7 45 116-162 56-101 (263)
221 2ip2_A Probable phenazine-spec 98.8 2.4E-08 8.2E-13 97.5 12.6 58 117-176 169-226 (334)
222 3dp7_A SAM-dependent methyltra 98.8 4.3E-08 1.5E-12 97.6 14.0 61 115-177 179-239 (363)
223 3uzu_A Ribosomal RNA small sub 98.8 1.2E-08 4E-13 99.3 9.7 56 116-177 43-100 (279)
224 2i7c_A Spermidine synthase; tr 98.8 5.3E-08 1.8E-12 94.2 13.9 62 115-176 78-141 (283)
225 1yub_A Ermam, rRNA methyltrans 98.8 4.2E-10 1.4E-14 106.2 -0.9 56 116-177 30-85 (245)
226 3i9f_A Putative type 11 methyl 98.8 5.5E-08 1.9E-12 85.1 12.6 51 116-175 18-68 (170)
227 2nyu_A Putative ribosomal RNA 98.8 5.1E-08 1.8E-12 87.0 12.6 154 116-346 23-189 (196)
228 3fpf_A Mtnas, putative unchara 98.8 1.5E-08 5.3E-13 99.6 9.9 85 83-176 97-181 (298)
229 3ftd_A Dimethyladenosine trans 98.7 1.8E-08 6E-13 96.2 8.5 55 116-177 32-86 (249)
230 3mq2_A 16S rRNA methyltransfer 98.7 5.9E-08 2E-12 88.5 11.6 60 116-177 28-91 (218)
231 3id6_C Fibrillarin-like rRNA/T 98.7 4.3E-07 1.5E-11 86.1 17.3 59 115-177 76-135 (232)
232 1vbf_A 231AA long hypothetical 98.7 7.7E-08 2.6E-12 88.4 11.8 55 116-176 71-125 (231)
233 1r18_A Protein-L-isoaspartate( 98.7 1.4E-07 4.6E-12 87.1 13.3 60 116-176 85-154 (227)
234 4azs_A Methyltransferase WBDD; 98.7 7.1E-08 2.4E-12 102.1 12.9 118 16-175 5-122 (569)
235 2gb4_A Thiopurine S-methyltran 98.7 1.6E-07 5.3E-12 89.6 13.9 60 116-177 69-143 (252)
236 1af7_A Chemotaxis receptor met 98.7 2E-08 7E-13 97.4 7.6 44 116-159 106-157 (274)
237 1qyr_A KSGA, high level kasuga 98.7 7.6E-09 2.6E-13 99.1 4.4 55 116-176 22-76 (252)
238 1vlm_A SAM-dependent methyltra 98.7 1.2E-07 4.1E-12 86.8 12.2 46 116-176 48-93 (219)
239 3cc8_A Putative methyltransfer 98.7 1.4E-07 4.8E-12 85.4 12.3 43 115-159 32-74 (230)
240 2bm8_A Cephalosporin hydroxyla 98.7 1.8E-08 6.3E-13 94.8 5.8 54 117-177 83-140 (236)
241 1u2z_A Histone-lysine N-methyl 98.7 1.1E-07 3.8E-12 98.0 12.0 60 115-175 242-309 (433)
242 3bxo_A N,N-dimethyltransferase 98.6 4E-07 1.4E-11 83.4 14.3 52 116-176 41-92 (239)
243 2xyq_A Putative 2'-O-methyl tr 98.6 1.2E-07 4.1E-12 92.9 11.3 142 116-346 64-213 (290)
244 2oyr_A UPF0341 protein YHIQ; a 98.6 2.3E-08 7.8E-13 96.4 5.7 58 117-176 90-154 (258)
245 3ggd_A SAM-dependent methyltra 98.6 1.3E-07 4.5E-12 87.6 9.5 55 116-177 57-111 (245)
246 1p91_A Ribosomal RNA large sub 98.6 9.1E-08 3.1E-12 90.1 8.0 54 116-176 86-139 (269)
247 2aot_A HMT, histamine N-methyl 98.6 7.1E-07 2.4E-11 85.6 14.3 56 116-172 53-114 (292)
248 3bgv_A MRNA CAP guanine-N7 met 98.5 4.6E-07 1.6E-11 87.6 12.0 61 116-177 35-100 (313)
249 3iv6_A Putative Zn-dependent a 98.5 1.7E-07 5.9E-12 90.4 8.9 46 115-162 45-90 (261)
250 4e2x_A TCAB9; kijanose, tetron 98.5 2E-07 6.8E-12 93.9 9.1 42 115-158 107-148 (416)
251 4hg2_A Methyltransferase type 98.5 1.8E-07 6E-12 89.6 8.0 51 116-176 40-90 (257)
252 2gs9_A Hypothetical protein TT 98.5 3.2E-07 1.1E-11 82.9 9.3 49 116-176 37-86 (211)
253 3lcv_B Sisomicin-gentamicin re 98.5 1E-07 3.6E-12 92.4 5.6 59 115-176 132-190 (281)
254 2qe6_A Uncharacterized protein 98.5 2.4E-06 8.3E-11 82.1 14.9 57 117-177 79-138 (274)
255 3htx_A HEN1; HEN1, small RNA m 98.5 2.1E-07 7E-12 102.4 7.8 75 93-177 708-788 (950)
256 3ufb_A Type I restriction-modi 98.4 6.1E-07 2.1E-11 94.5 11.0 58 116-175 218-288 (530)
257 2avn_A Ubiquinone/menaquinone 98.4 9.7E-07 3.3E-11 83.0 10.8 43 116-160 55-97 (260)
258 3opn_A Putative hemolysin; str 98.4 2.5E-08 8.5E-13 94.1 -0.6 43 116-159 38-80 (232)
259 2cmg_A Spermidine synthase; tr 98.4 6.2E-07 2.1E-11 86.1 8.6 57 116-175 73-132 (262)
260 3lst_A CALO1 methyltransferase 98.4 1.8E-06 6E-11 85.2 11.9 57 116-176 185-241 (348)
261 2vdw_A Vaccinia virus capping 98.4 1.7E-06 5.9E-11 84.5 11.6 59 116-176 49-112 (302)
262 3frh_A 16S rRNA methylase; met 98.3 1.3E-06 4.3E-11 83.9 9.1 56 115-176 105-160 (253)
263 2zfu_A Nucleomethylin, cerebra 98.3 2.5E-06 8.5E-11 77.4 10.7 106 116-326 68-175 (215)
264 1fp1_D Isoliquiritigenin 2'-O- 98.2 1E-05 3.5E-10 80.4 13.9 53 115-176 209-261 (372)
265 3reo_A (ISO)eugenol O-methyltr 98.2 1.1E-05 3.7E-10 80.6 13.9 53 115-176 203-255 (368)
266 1fp2_A Isoflavone O-methyltran 98.2 9.4E-06 3.2E-10 80.0 13.1 52 116-176 189-240 (352)
267 4a6d_A Hydroxyindole O-methylt 98.2 3E-05 1E-09 76.9 15.9 59 116-177 180-238 (353)
268 2oxt_A Nucleoside-2'-O-methylt 98.2 1.8E-06 6.1E-11 83.1 5.9 31 116-149 75-105 (265)
269 3hp7_A Hemolysin, putative; st 98.1 4.6E-06 1.6E-10 81.7 8.3 41 116-157 86-126 (291)
270 2wa2_A Non-structural protein 98.1 1.5E-06 5.1E-11 84.2 4.5 31 116-149 83-113 (276)
271 1zg3_A Isoflavanone 4'-O-methy 98.1 2.7E-05 9.2E-10 76.9 12.5 52 116-176 194-245 (358)
272 3p9c_A Caffeic acid O-methyltr 98.0 4.4E-05 1.5E-09 76.0 13.2 54 115-177 201-254 (364)
273 4gqb_A Protein arginine N-meth 98.0 1.2E-05 4.3E-10 86.3 9.6 61 115-177 357-421 (637)
274 2p41_A Type II methyltransfera 97.7 1.6E-05 5.3E-10 78.0 4.0 29 116-147 83-111 (305)
275 3giw_A Protein of unknown func 97.7 9.4E-05 3.2E-09 72.0 8.1 60 117-178 80-142 (277)
276 3sso_A Methyltransferase; macr 97.6 2.5E-05 8.6E-10 79.9 4.1 52 115-177 216-274 (419)
277 2ld4_A Anamorsin; methyltransf 97.6 0.00027 9.4E-09 61.9 10.2 108 115-322 12-128 (176)
278 2k4m_A TR8_protein, UPF0146 pr 97.6 4E-05 1.4E-09 68.1 4.4 37 116-153 36-73 (153)
279 1wg8_A Predicted S-adenosylmet 97.6 9.5E-05 3.3E-09 72.1 6.8 53 116-176 23-75 (285)
280 2zig_A TTHA0409, putative modi 97.5 0.00031 1.1E-08 68.0 9.0 45 116-162 236-280 (297)
281 4fzv_A Putative methyltransfer 97.5 0.00034 1.2E-08 70.3 9.4 146 115-320 148-303 (359)
282 3ua3_A Protein arginine N-meth 97.4 0.00011 3.8E-09 79.6 5.1 60 116-177 410-482 (745)
283 3cvo_A Methyltransferase-like 97.3 0.0015 5.2E-08 60.5 10.6 57 117-177 32-90 (202)
284 3o4f_A Spermidine synthase; am 97.2 0.0096 3.3E-07 58.2 15.6 63 115-177 83-148 (294)
285 2oo3_A Protein involved in cat 97.1 0.00055 1.9E-08 66.7 6.2 54 117-176 93-146 (283)
286 1g60_A Adenine-specific methyl 96.7 0.003 1E-07 59.9 7.7 47 115-163 212-258 (260)
287 2zig_A TTHA0409, putative modi 96.7 0.0016 5.5E-08 62.9 5.5 81 239-325 38-131 (297)
288 2qy6_A UPF0209 protein YFCK; s 96.5 0.0077 2.6E-07 57.5 9.0 47 115-161 60-132 (257)
289 1i4w_A Mitochondrial replicati 96.3 0.0065 2.2E-07 60.8 7.2 57 116-177 59-115 (353)
290 2wk1_A NOVP; transferase, O-me 96.2 0.0051 1.7E-07 59.8 5.9 61 115-176 106-198 (282)
291 3c6k_A Spermine synthase; sper 96.2 0.013 4.3E-07 59.4 8.9 136 116-320 206-350 (381)
292 1g55_A DNA cytosine methyltran 95.5 0.0066 2.2E-07 60.2 3.4 44 117-160 3-47 (343)
293 3tka_A Ribosomal RNA small sub 95.1 0.024 8.2E-07 56.6 6.0 55 116-176 58-113 (347)
294 2py6_A Methyltransferase FKBM; 95.1 0.05 1.7E-06 55.1 8.3 62 115-176 226-291 (409)
295 2c7p_A Modification methylase 94.8 0.046 1.6E-06 53.8 6.8 43 116-160 11-54 (327)
296 3g7u_A Cytosine-specific methy 94.3 0.047 1.6E-06 54.9 5.7 41 117-159 3-44 (376)
297 4auk_A Ribosomal RNA large sub 93.0 0.17 5.9E-06 51.0 7.2 52 115-177 211-262 (375)
298 1boo_A Protein (N-4 cytosine-s 92.0 0.26 8.8E-06 48.1 6.9 74 239-324 31-114 (323)
299 1boo_A Protein (N-4 cytosine-s 90.2 0.37 1.3E-05 47.0 6.0 47 115-163 252-298 (323)
300 3qv2_A 5-cytosine DNA methyltr 90.2 0.34 1.2E-05 47.7 5.7 45 115-159 9-55 (327)
301 1g60_A Adenine-specific methyl 89.4 0.76 2.6E-05 43.1 7.3 72 239-323 21-92 (260)
302 2efj_A 3,7-dimethylxanthine me 88.7 1.2 3.9E-05 45.0 8.4 21 116-136 53-73 (384)
303 2qrv_A DNA (cytosine-5)-methyl 88.1 0.65 2.2E-05 45.0 5.9 45 115-159 15-60 (295)
304 1eg2_A Modification methylase 88.0 0.7 2.4E-05 45.2 6.2 47 115-163 242-291 (319)
305 4h0n_A DNMT2; SAH binding, tra 85.4 0.94 3.2E-05 44.6 5.5 45 116-160 3-48 (333)
306 3r24_A NSP16, 2'-O-methyl tran 82.7 9.5 0.00032 37.6 11.1 64 281-347 194-260 (344)
307 1eg2_A Modification methylase 80.5 8 0.00027 37.6 9.9 70 239-323 56-133 (319)
308 3ioy_A Short-chain dehydrogena 78.0 2.6 8.9E-05 40.4 5.5 60 116-177 8-69 (319)
309 3gcz_A Polyprotein; flavivirus 77.5 1.2 4.2E-05 43.1 3.0 35 116-150 91-125 (282)
310 3evf_A RNA-directed RNA polyme 76.7 1.3 4.6E-05 42.7 3.0 33 116-148 75-107 (277)
311 3s2e_A Zinc-containing alcohol 75.8 11 0.00037 36.1 9.2 74 76-157 125-208 (340)
312 3h7a_A Short chain dehydrogena 75.2 2.3 7.9E-05 39.1 4.1 58 116-177 7-66 (252)
313 3ubt_Y Modification methylase 74.2 2.3 7.8E-05 40.7 3.9 40 118-159 2-42 (331)
314 4g81_D Putative hexonate dehyd 74.2 2.3 8E-05 40.1 3.9 58 116-177 9-68 (255)
315 3me5_A Cytosine-specific methy 73.3 4.1 0.00014 42.1 5.8 44 115-160 87-131 (482)
316 3rku_A Oxidoreductase YMR226C; 71.2 6.5 0.00022 37.0 6.3 59 117-177 34-97 (287)
317 3b5i_A S-adenosyl-L-methionine 70.5 7.2 0.00025 39.0 6.7 48 115-176 52-99 (374)
318 1rjd_A PPM1P, carboxy methyl t 69.7 8 0.00027 37.9 6.7 61 116-177 98-177 (334)
319 2dph_A Formaldehyde dismutase; 68.7 6.3 0.00022 38.8 5.8 40 116-156 186-227 (398)
320 4dkj_A Cytosine-specific methy 66.8 6.5 0.00022 39.7 5.5 45 116-160 10-59 (403)
321 1f8f_A Benzyl alcohol dehydrog 66.1 9.3 0.00032 37.1 6.4 41 116-157 191-233 (371)
322 4fn4_A Short chain dehydrogena 66.0 21 0.00073 33.4 8.6 59 116-178 7-67 (254)
323 3t4x_A Oxidoreductase, short c 65.6 7.6 0.00026 35.8 5.4 60 116-177 10-71 (267)
324 3jv7_A ADH-A; dehydrogenase, n 65.6 9.9 0.00034 36.4 6.4 42 116-157 172-214 (345)
325 3lkz_A Non-structural protein 65.4 2.8 9.6E-05 41.1 2.4 35 116-150 95-129 (321)
326 3p8z_A Mtase, non-structural p 65.1 3.6 0.00012 39.3 2.9 34 116-149 79-112 (267)
327 1m6e_X S-adenosyl-L-methionnin 64.4 1.1 3.8E-05 44.7 -0.7 20 115-134 51-70 (359)
328 3eld_A Methyltransferase; flav 63.6 3.7 0.00013 40.1 2.8 35 115-149 81-115 (300)
329 3o38_A Short chain dehydrogena 61.7 26 0.00088 31.8 8.2 60 116-178 22-84 (266)
330 1kol_A Formaldehyde dehydrogen 60.7 13 0.00045 36.4 6.4 41 116-157 186-228 (398)
331 1xg5_A ARPG836; short chain de 60.1 36 0.0012 31.1 9.0 59 117-177 33-93 (279)
332 2h6e_A ADH-4, D-arabinose 1-de 59.4 14 0.00048 35.3 6.2 42 116-157 171-214 (344)
333 3o26_A Salutaridine reductase; 59.2 29 0.00098 31.9 8.1 60 116-178 12-73 (311)
334 3qiv_A Short-chain dehydrogena 58.7 35 0.0012 30.6 8.5 59 116-178 9-69 (253)
335 1pl8_A Human sorbitol dehydrog 58.6 15 0.00053 35.3 6.4 41 116-157 172-214 (356)
336 3ucx_A Short chain dehydrogena 58.0 40 0.0014 30.7 8.9 59 116-178 11-71 (264)
337 1yb1_A 17-beta-hydroxysteroid 58.0 40 0.0014 30.8 8.8 58 116-177 31-90 (272)
338 3awd_A GOX2181, putative polyo 57.9 42 0.0014 30.0 8.8 58 116-177 13-72 (260)
339 3llv_A Exopolyphosphatase-rela 57.9 9.5 0.00033 31.3 4.1 49 117-176 7-57 (141)
340 3swr_A DNA (cytosine-5)-methyl 57.7 11 0.00037 42.6 5.6 44 114-159 538-583 (1002)
341 1wma_A Carbonyl reductase [NAD 57.5 34 0.0011 30.6 8.1 57 117-177 5-64 (276)
342 3tjr_A Short chain dehydrogena 57.5 37 0.0013 31.8 8.7 59 116-178 31-91 (301)
343 3ek2_A Enoyl-(acyl-carrier-pro 56.7 7.6 0.00026 35.3 3.6 59 115-177 13-74 (271)
344 3ic5_A Putative saccharopine d 56.5 23 0.00079 27.4 6.0 38 117-156 6-46 (118)
345 3ppi_A 3-hydroxyacyl-COA dehyd 56.4 19 0.00065 33.1 6.4 55 116-177 30-86 (281)
346 4fgs_A Probable dehydrogenase 56.3 11 0.00037 35.9 4.6 56 115-177 28-85 (273)
347 3gaf_A 7-alpha-hydroxysteroid 54.9 41 0.0014 30.6 8.3 59 116-178 12-72 (256)
348 3rkr_A Short chain oxidoreduct 54.7 37 0.0013 30.9 8.0 58 116-177 29-88 (262)
349 3svt_A Short-chain type dehydr 54.4 46 0.0016 30.6 8.7 61 116-177 11-73 (281)
350 1fmc_A 7 alpha-hydroxysteroid 54.2 41 0.0014 29.9 8.1 57 117-177 12-70 (255)
351 1e7w_A Pteridine reductase; di 53.8 39 0.0013 31.4 8.2 57 117-177 10-70 (291)
352 1e3j_A NADP(H)-dependent ketos 53.7 21 0.00071 34.3 6.3 40 116-156 169-209 (352)
353 1zkd_A DUF185; NESG, RPR58, st 53.3 22 0.00074 35.8 6.5 53 116-172 81-140 (387)
354 3tfo_A Putative 3-oxoacyl-(acy 53.3 39 0.0013 31.2 8.0 57 117-177 5-63 (264)
355 3lyl_A 3-oxoacyl-(acyl-carrier 53.1 46 0.0016 29.6 8.3 57 117-177 6-64 (247)
356 3imf_A Short chain dehydrogena 53.0 34 0.0012 31.1 7.4 58 117-178 7-66 (257)
357 4eez_A Alcohol dehydrogenase 1 52.8 23 0.00078 33.7 6.4 42 116-157 164-206 (348)
358 1jvb_A NAD(H)-dependent alcoho 52.5 23 0.00077 33.9 6.4 42 116-157 171-214 (347)
359 1uuf_A YAHK, zinc-type alcohol 52.5 15 0.0005 35.9 5.1 41 116-157 195-236 (369)
360 3v8b_A Putative dehydrogenase, 52.5 44 0.0015 31.0 8.2 58 117-178 29-88 (283)
361 3vyw_A MNMC2; tRNA wobble urid 51.6 85 0.0029 30.5 10.3 73 240-341 185-257 (308)
362 3sju_A Keto reductase; short-c 51.6 47 0.0016 30.6 8.3 58 117-178 25-84 (279)
363 3iht_A S-adenosyl-L-methionine 51.6 25 0.00084 31.4 5.8 32 116-147 41-72 (174)
364 2qhx_A Pteridine reductase 1; 49.8 47 0.0016 31.6 8.2 58 117-178 47-108 (328)
365 3nyw_A Putative oxidoreductase 49.2 53 0.0018 29.7 8.1 61 116-177 7-69 (250)
366 3pxx_A Carveol dehydrogenase; 48.9 64 0.0022 29.4 8.7 59 116-178 10-82 (287)
367 3two_A Mannitol dehydrogenase; 48.8 16 0.00054 35.1 4.6 41 116-157 177-218 (348)
368 3f9i_A 3-oxoacyl-[acyl-carrier 48.7 27 0.00093 31.2 6.0 56 115-177 13-70 (249)
369 3fpc_A NADP-dependent alcohol 48.5 24 0.00081 33.8 5.8 41 116-157 167-209 (352)
370 3t7c_A Carveol dehydrogenase; 48.4 63 0.0022 30.0 8.7 59 116-178 28-100 (299)
371 3lf2_A Short chain oxidoreduct 48.2 59 0.002 29.5 8.3 60 116-178 8-70 (265)
372 3grk_A Enoyl-(acyl-carrier-pro 48.2 15 0.0005 34.6 4.1 58 116-177 31-91 (293)
373 2jah_A Clavulanic acid dehydro 48.1 71 0.0024 28.7 8.7 57 117-177 8-66 (247)
374 2rhc_B Actinorhodin polyketide 48.0 66 0.0023 29.5 8.7 57 117-177 23-81 (277)
375 4dvj_A Putative zinc-dependent 47.9 22 0.00075 34.5 5.5 42 116-157 172-215 (363)
376 3ksu_A 3-oxoacyl-acyl carrier 47.5 21 0.00071 32.8 5.0 58 116-177 11-73 (262)
377 2qq5_A DHRS1, dehydrogenase/re 47.2 48 0.0017 30.0 7.5 57 117-177 6-64 (260)
378 3sx2_A Putative 3-ketoacyl-(ac 46.7 63 0.0022 29.4 8.3 59 116-178 13-85 (278)
379 1xu9_A Corticosteroid 11-beta- 46.7 51 0.0017 30.3 7.7 58 117-177 29-88 (286)
380 1yxm_A Pecra, peroxisomal tran 46.7 76 0.0026 29.2 8.9 61 116-177 18-82 (303)
381 3uve_A Carveol dehydrogenase ( 46.6 67 0.0023 29.4 8.5 59 116-178 11-87 (286)
382 1zem_A Xylitol dehydrogenase; 45.7 73 0.0025 28.8 8.5 57 117-177 8-66 (262)
383 3rd5_A Mypaa.01249.C; ssgcid, 45.5 36 0.0012 31.5 6.4 55 116-177 16-72 (291)
384 3pgx_A Carveol dehydrogenase; 45.1 74 0.0025 29.1 8.5 58 116-177 15-87 (280)
385 1p0f_A NADP-dependent alcohol 44.9 23 0.00079 34.2 5.1 41 116-157 192-234 (373)
386 2ae2_A Protein (tropinone redu 44.7 80 0.0027 28.5 8.6 58 116-177 9-68 (260)
387 4ft4_B DNA (cytosine-5)-methyl 44.4 17 0.00059 39.2 4.5 45 115-159 211-260 (784)
388 1iy8_A Levodione reductase; ox 44.3 74 0.0025 28.8 8.3 60 116-177 13-74 (267)
389 1cdo_A Alcohol dehydrogenase; 44.1 25 0.00084 34.1 5.2 40 116-156 193-234 (374)
390 3tox_A Short chain dehydrogena 44.1 38 0.0013 31.4 6.3 57 117-177 9-67 (280)
391 4ej6_A Putative zinc-binding d 43.9 37 0.0013 33.0 6.4 41 116-157 183-225 (370)
392 4egf_A L-xylulose reductase; s 43.8 47 0.0016 30.3 6.8 60 116-178 20-81 (266)
393 4f3n_A Uncharacterized ACR, CO 43.7 18 0.00062 36.9 4.2 84 80-172 107-200 (432)
394 1ae1_A Tropinone reductase-I; 43.3 90 0.0031 28.4 8.7 58 116-177 21-80 (273)
395 3l77_A Short-chain alcohol deh 43.1 69 0.0024 28.2 7.7 59 117-178 3-63 (235)
396 2gdz_A NAD+-dependent 15-hydro 43.1 77 0.0026 28.6 8.2 59 117-177 8-68 (267)
397 2cfc_A 2-(R)-hydroxypropyl-COM 43.0 73 0.0025 28.2 7.9 58 117-177 3-62 (250)
398 1oaa_A Sepiapterin reductase; 43.0 51 0.0018 29.7 6.9 59 117-177 7-70 (259)
399 3tsc_A Putative oxidoreductase 42.9 90 0.0031 28.4 8.7 58 116-177 11-83 (277)
400 4ibo_A Gluconate dehydrogenase 42.8 49 0.0017 30.5 6.8 58 116-177 26-85 (271)
401 2nwq_A Probable short-chain de 42.7 14 0.00049 34.2 3.1 56 117-177 22-79 (272)
402 3r1i_A Short-chain type dehydr 42.5 47 0.0016 30.6 6.7 59 116-178 32-92 (276)
403 1vj0_A Alcohol dehydrogenase, 42.4 33 0.0011 33.3 5.9 40 116-156 196-237 (380)
404 1w6u_A 2,4-dienoyl-COA reducta 42.3 79 0.0027 28.9 8.3 59 116-177 26-86 (302)
405 3av4_A DNA (cytosine-5)-methyl 42.2 23 0.00079 41.1 5.2 43 115-159 850-894 (1330)
406 1h2b_A Alcohol dehydrogenase; 42.1 41 0.0014 32.3 6.4 41 116-156 187-228 (359)
407 3m6i_A L-arabinitol 4-dehydrog 42.0 37 0.0013 32.6 6.1 42 116-158 180-223 (363)
408 2fzw_A Alcohol dehydrogenase c 41.9 28 0.00095 33.6 5.1 41 116-157 191-233 (373)
409 2jhf_A Alcohol dehydrogenase E 41.6 28 0.00096 33.6 5.2 40 116-156 192-233 (374)
410 3ado_A Lambda-crystallin; L-gu 41.6 38 0.0013 32.9 6.0 45 117-161 7-51 (319)
411 3ftp_A 3-oxoacyl-[acyl-carrier 41.5 56 0.0019 30.0 7.0 58 116-177 28-87 (270)
412 3pk0_A Short-chain dehydrogena 41.4 59 0.002 29.6 7.1 59 116-177 10-70 (262)
413 4eue_A Putative reductase CA_C 41.3 25 0.00086 35.5 4.8 59 115-177 59-133 (418)
414 4imr_A 3-oxoacyl-(acyl-carrier 41.1 39 0.0013 31.2 5.9 59 116-178 33-93 (275)
415 3cxt_A Dehydrogenase with diff 41.0 87 0.003 29.1 8.4 58 116-177 34-93 (291)
416 4da9_A Short-chain dehydrogena 40.8 99 0.0034 28.4 8.7 59 116-178 29-90 (280)
417 3iup_A Putative NADPH:quinone 40.5 33 0.0011 33.4 5.4 40 117-157 172-214 (379)
418 4fc7_A Peroxisomal 2,4-dienoyl 40.4 74 0.0025 29.2 7.7 60 116-178 27-88 (277)
419 3uko_A Alcohol dehydrogenase c 40.1 25 0.00086 34.1 4.5 40 116-156 194-235 (378)
420 1y1p_A ARII, aldehyde reductas 40.0 69 0.0024 29.5 7.5 59 116-177 11-72 (342)
421 1e3i_A Alcohol dehydrogenase, 39.7 31 0.0011 33.3 5.2 40 116-156 196-237 (376)
422 3s55_A Putative short-chain de 39.3 1.1E+02 0.0037 27.9 8.7 59 116-178 10-82 (281)
423 1xkq_A Short-chain reductase f 39.2 65 0.0022 29.5 7.1 60 117-177 7-68 (280)
424 1geg_A Acetoin reductase; SDR 38.9 71 0.0024 28.7 7.2 56 118-177 4-61 (256)
425 3ip1_A Alcohol dehydrogenase, 38.9 48 0.0016 32.5 6.4 41 116-157 214-256 (404)
426 3ai3_A NADPH-sorbose reductase 38.7 97 0.0033 27.9 8.1 58 117-177 8-67 (263)
427 3oec_A Carveol dehydrogenase ( 38.6 90 0.0031 29.3 8.1 59 116-178 46-118 (317)
428 4fs3_A Enoyl-[acyl-carrier-pro 38.6 59 0.002 29.7 6.6 60 116-177 6-68 (256)
429 4hp8_A 2-deoxy-D-gluconate 3-d 38.1 96 0.0033 28.9 8.0 56 116-177 9-66 (247)
430 4iin_A 3-ketoacyl-acyl carrier 37.6 97 0.0033 28.1 8.0 58 116-177 29-89 (271)
431 2zat_A Dehydrogenase/reductase 36.8 81 0.0028 28.3 7.2 57 117-177 15-73 (260)
432 2d8a_A PH0655, probable L-thre 36.0 51 0.0017 31.4 6.0 41 116-157 168-210 (348)
433 3i1j_A Oxidoreductase, short c 36.0 1E+02 0.0034 27.3 7.7 58 116-176 14-73 (247)
434 1xhl_A Short-chain dehydrogena 35.8 83 0.0028 29.3 7.3 60 117-177 27-88 (297)
435 3asu_A Short-chain dehydrogena 35.7 27 0.00093 31.7 3.7 52 119-177 3-56 (248)
436 1xq1_A Putative tropinone redu 35.1 89 0.0031 28.0 7.2 57 117-177 15-73 (266)
437 1pqw_A Polyketide synthase; ro 34.6 45 0.0015 28.7 4.9 40 116-156 39-80 (198)
438 1spx_A Short-chain reductase f 34.2 95 0.0033 28.1 7.3 60 117-177 7-68 (278)
439 1vl8_A Gluconate 5-dehydrogena 34.0 1.3E+02 0.0043 27.4 8.1 58 116-177 21-81 (267)
440 2eih_A Alcohol dehydrogenase; 33.9 59 0.002 30.9 6.0 41 116-157 167-209 (343)
441 4dry_A 3-oxoacyl-[acyl-carrier 33.9 64 0.0022 29.8 6.1 60 116-178 33-94 (281)
442 1ja9_A 4HNR, 1,3,6,8-tetrahydr 33.7 97 0.0033 27.7 7.2 57 117-177 22-81 (274)
443 3f1l_A Uncharacterized oxidore 33.6 92 0.0032 28.0 7.1 58 116-176 12-71 (252)
444 3mi6_A Alpha-galactosidase; NE 33.6 84 0.0029 34.3 7.6 94 51-153 447-555 (745)
445 3v2h_A D-beta-hydroxybutyrate 33.3 1.3E+02 0.0043 27.7 8.1 59 116-177 25-86 (281)
446 3edm_A Short chain dehydrogena 33.3 1.1E+02 0.0036 27.8 7.4 59 116-178 8-69 (259)
447 2uvd_A 3-oxoacyl-(acyl-carrier 33.1 1E+02 0.0035 27.4 7.2 57 117-177 5-64 (246)
448 4dmm_A 3-oxoacyl-[acyl-carrier 33.0 1.2E+02 0.0043 27.5 7.9 59 116-178 28-89 (269)
449 4eso_A Putative oxidoreductase 32.6 1.3E+02 0.0046 27.0 8.0 55 116-177 8-64 (255)
450 1gee_A Glucose 1-dehydrogenase 31.8 1E+02 0.0035 27.4 7.0 57 117-177 8-67 (261)
451 4a2c_A Galactitol-1-phosphate 31.8 71 0.0024 30.1 6.2 42 116-157 161-203 (346)
452 3oid_A Enoyl-[acyl-carrier-pro 31.5 1.4E+02 0.0049 26.9 8.0 58 117-178 5-65 (258)
453 2px2_A Genome polyprotein [con 31.4 11 0.00037 36.2 0.2 49 89-146 55-108 (269)
454 2c07_A 3-oxoacyl-(acyl-carrier 31.3 1.1E+02 0.0037 28.0 7.2 57 117-177 45-103 (285)
455 1v3u_A Leukotriene B4 12- hydr 30.9 71 0.0024 30.0 6.0 39 116-155 146-186 (333)
456 2bd0_A Sepiapterin reductase; 30.9 1E+02 0.0035 27.1 6.8 56 118-177 4-68 (244)
457 3fwz_A Inner membrane protein 30.8 1.1E+02 0.0037 25.0 6.4 50 116-176 7-58 (140)
458 3oig_A Enoyl-[acyl-carrier-pro 30.5 1.1E+02 0.0038 27.4 7.1 60 116-178 7-70 (266)
459 4e6p_A Probable sorbitol dehyd 30.2 1.8E+02 0.006 26.1 8.4 55 116-177 8-64 (259)
460 2bgk_A Rhizome secoisolaricire 30.0 1.5E+02 0.0051 26.5 7.8 57 116-177 16-74 (278)
461 2uyo_A Hypothetical protein ML 29.7 1.4E+02 0.0049 28.5 8.0 58 117-177 104-163 (310)
462 2gn4_A FLAA1 protein, UDP-GLCN 29.6 1E+02 0.0035 29.2 6.9 56 116-177 21-80 (344)
463 2pnf_A 3-oxoacyl-[acyl-carrier 29.6 91 0.0031 27.4 6.2 58 117-177 8-67 (248)
464 3rih_A Short chain dehydrogena 29.6 61 0.0021 30.3 5.2 60 116-178 41-102 (293)
465 1mxh_A Pteridine reductase 2; 29.5 1E+02 0.0034 27.9 6.6 58 117-177 12-72 (276)
466 3gvc_A Oxidoreductase, probabl 29.3 1.3E+02 0.0043 27.7 7.3 55 116-177 29-85 (277)
467 2b4q_A Rhamnolipids biosynthes 29.2 1.1E+02 0.0038 28.0 6.9 57 116-177 29-87 (276)
468 1qsg_A Enoyl-[acyl-carrier-pro 29.0 45 0.0015 30.3 4.0 57 117-177 10-69 (265)
469 2z1n_A Dehydrogenase; reductas 29.0 1.8E+02 0.0063 25.9 8.3 59 117-177 8-68 (260)
470 1wey_A Calcipressin 1; structu 29.0 37 0.0013 27.9 3.0 42 28-70 26-67 (104)
471 3a28_C L-2.3-butanediol dehydr 29.0 93 0.0032 28.0 6.2 57 117-177 3-63 (258)
472 3rwb_A TPLDH, pyridoxal 4-dehy 28.9 1.3E+02 0.0044 27.0 7.1 55 116-177 6-62 (247)
473 2hcy_A Alcohol dehydrogenase 1 28.5 59 0.002 30.9 4.9 41 116-157 170-212 (347)
474 3gms_A Putative NADPH:quinone 28.4 40 0.0014 32.1 3.7 41 116-157 145-187 (340)
475 3n74_A 3-ketoacyl-(acyl-carrie 28.2 1.9E+02 0.0065 25.7 8.2 55 116-177 9-65 (261)
476 2c0c_A Zinc binding alcohol de 28.1 74 0.0025 30.6 5.6 41 116-157 164-206 (362)
477 3afn_B Carbonyl reductase; alp 28.1 72 0.0025 28.2 5.2 57 117-177 8-67 (258)
478 2wsb_A Galactitol dehydrogenas 28.1 1.9E+02 0.0066 25.3 8.1 55 116-177 11-68 (254)
479 3l6e_A Oxidoreductase, short-c 27.9 1.7E+02 0.006 25.9 7.8 54 117-177 4-59 (235)
480 3ijr_A Oxidoreductase, short c 27.7 1.7E+02 0.0058 26.9 8.0 58 116-177 47-107 (291)
481 3uog_A Alcohol dehydrogenase; 27.3 1E+02 0.0035 29.5 6.5 41 116-157 190-231 (363)
482 1zk4_A R-specific alcohol dehy 27.2 1.1E+02 0.0037 27.0 6.2 56 117-177 7-64 (251)
483 2pd4_A Enoyl-[acyl-carrier-pro 27.1 39 0.0013 30.9 3.3 57 117-177 7-66 (275)
484 3is3_A 17BETA-hydroxysteroid d 26.8 1.9E+02 0.0066 26.0 8.1 59 116-178 18-79 (270)
485 3qlj_A Short chain dehydrogena 26.5 94 0.0032 29.2 6.0 58 116-177 27-96 (322)
486 4b7c_A Probable oxidoreductase 26.2 69 0.0024 30.2 4.9 40 116-156 150-191 (336)
487 3op4_A 3-oxoacyl-[acyl-carrier 26.2 1.8E+02 0.0062 25.9 7.7 55 116-177 9-65 (248)
488 3r3s_A Oxidoreductase; structu 25.9 1.7E+02 0.0057 27.0 7.5 58 116-177 49-110 (294)
489 4dqx_A Probable oxidoreductase 25.6 1.8E+02 0.0061 26.6 7.6 55 116-177 27-83 (277)
490 3ezl_A Acetoacetyl-COA reducta 25.6 25 0.00084 31.7 1.5 58 116-177 13-73 (256)
491 2dq4_A L-threonine 3-dehydroge 25.4 47 0.0016 31.6 3.6 41 116-157 165-207 (343)
492 3sc4_A Short chain dehydrogena 25.3 97 0.0033 28.5 5.7 58 116-177 9-75 (285)
493 2j3h_A NADP-dependent oxidored 25.3 82 0.0028 29.7 5.3 40 116-156 156-197 (345)
494 3zv4_A CIS-2,3-dihydrobiphenyl 25.2 2.2E+02 0.0075 26.0 8.2 54 117-177 6-61 (281)
495 2b5w_A Glucose dehydrogenase; 24.9 59 0.002 31.1 4.2 40 117-156 174-219 (357)
496 3uf0_A Short-chain dehydrogena 24.8 1.7E+02 0.006 26.6 7.4 58 116-178 31-90 (273)
497 1yb5_A Quinone oxidoreductase; 24.6 1.1E+02 0.0036 29.3 6.0 40 116-156 171-212 (351)
498 2hmt_A YUAA protein; RCK, KTN, 24.6 50 0.0017 26.3 3.1 35 117-153 7-43 (144)
499 3osu_A 3-oxoacyl-[acyl-carrier 24.5 1.8E+02 0.0062 25.8 7.3 58 117-178 5-65 (246)
500 3l4b_C TRKA K+ channel protien 24.4 66 0.0023 28.3 4.2 48 119-176 3-52 (218)
No 1
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=100.00 E-value=7.2e-38 Score=296.29 Aligned_cols=242 Identities=45% Similarity=0.813 Sum_probs=194.8
Q ss_pred CCCceeeCCChHhHHHHHHHHhhhcCCcEEEecCCCeeCCCCCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCccc
Q 015035 48 DGRPRIDWTDFNATRELTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGAN 127 (414)
Q Consensus 48 ~g~~~iDf~~~~a~r~Lt~~LL~~~fgl~~~vp~gvLiPriP~R~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG 127 (414)
+|+.+|||+++++++.|+++++++|||++|.+++++|+|++|+|.++..++.+++... +. ......+|||+|||+|
T Consensus 2 ~~~~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~~~~~~~~~~~--~~--~~~~~~~vLDlG~G~G 77 (254)
T 2h00_A 2 SGRVSLNFKDPEAVRALTCTLLREDFGLSIDIPLERLIPTVPLRLNYIHWVEDLIGHQ--DS--DKSTLRRGIDIGTGAS 77 (254)
T ss_dssp ---CCSCTTSHHHHHHHHHHHHHHHHCCCCCCCTTSCCCCHHHHHHHHHHHHHHHCCC--CG--GGCCCCEEEEESCTTT
T ss_pred CcceEeecCChHHHHHHHHHHHHHcCCeeeecCccccCCCccchHHHHHHHHHHHhhc--cc--cCCCCCEEEEeCCChh
Confidence 4788999999999999999999999999999999999999888999999998888642 10 0013468999999999
Q ss_pred HHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccccccccCCCCCCC
Q 015035 128 CIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEE 207 (414)
Q Consensus 128 ~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (414)
.+++.++.+.++++|+|+|+|+.+++.|++|++.++ +.++++++++|..+.
T Consensus 78 ~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~---------------------------- 128 (254)
T 2h00_A 78 CIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNN-LSDLIKVVKVPQKTL---------------------------- 128 (254)
T ss_dssp THHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTT-CTTTEEEEECCTTCS----------------------------
T ss_pred HHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcC-CCccEEEEEcchhhh----------------------------
Confidence 999999988888999999999999999999999996 888899999874310
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCccccccC-CCCcEEEEEECCCccccccc-c--------cCCCccccCCCCCcccccC
Q 015035 208 AEPSSSSSFNLPAGAQSSYHGPPVLVGVVR-DGEQFDFCICNPPFFESMEE-A--------GLNPKTSCGGTPEEMVCSG 277 (414)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~il~~~~~-~~~~fD~imcNPPy~~s~ee-~--------~~~P~~a~~g~~~Em~~~G 277 (414)
++..+.. .+++||+|+|||||+...++ . ..+|..++.+...+++.||
T Consensus 129 -----------------------~~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Lkpg 185 (254)
T 2h00_A 129 -----------------------LMDALKEESEIIYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEG 185 (254)
T ss_dssp -----------------------STTTSTTCCSCCBSEEEECCCCC-------------------------CTTTTHHHH
T ss_pred -----------------------hhhhhhcccCCcccEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecC
Confidence 0111100 12589999999999976421 1 1356777778888999999
Q ss_pred ChHHHHHHHHHHHHHhhccCcEEEEEeCCcCCHHHHHHHHHHcCCceEEEEEecCCCeeEEEEEEEec
Q 015035 278 GERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345 (414)
Q Consensus 278 Ge~~Fv~rii~eS~~l~~~~~w~t~mvgk~~~l~~l~~~l~~~g~~~v~~~e~~qG~t~Rw~lAWsf~ 345 (414)
|++.|+.++++++..++.+.+|++.+++....+..+.+.|++.|++.+++.++.+|++.||++||+|.
T Consensus 186 G~l~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~Gf~~v~~~~~~~g~~~~~~~~w~~~ 253 (254)
T 2h00_A 186 GELEFVKRIIHDSLQLKKRLRWYSCMLGKKCSLAPLKEELRIQGVPKVTYTEFCQGRTMRWALAWSFY 253 (254)
T ss_dssp THHHHHHHHHHHHHHHGGGBSCEEEEESSTTSHHHHHHHHHHTTCSEEEEEEEEETTEEEEEEEEESC
T ss_pred CEEEEEHHHHHHHHhcccceEEEEECCCChhHHHHHHHHHHHcCCCceEEEEEecCCceEEEEEeecc
Confidence 99999999999998889999999999998888899999999999999999999999999999999996
No 2
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.94 E-value=2.6e-26 Score=212.86 Aligned_cols=214 Identities=17% Similarity=0.244 Sum_probs=158.0
Q ss_pred ceeeCCChHhHHHHHHHHhhhcCCcEEEecCCCeeCCCCCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCc-ccHH
Q 015035 51 PRIDWTDFNATRELTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTG-ANCI 129 (414)
Q Consensus 51 ~~iDf~~~~a~r~Lt~~LL~~~fgl~~~vp~gvLiPriP~R~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtG-sG~I 129 (414)
.++||++++++++++++++++|||..+.+.+++++|++.. +++. +... + ....+|||+||| +|.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-----~~l~--~~~~-~------~~~~~vLDlG~G~~G~~ 70 (230)
T 3evz_A 5 GKLDFSNRQARILYNKAIAKALFGLDIEYHPKGLVTTPIS-----RYIF--LKTF-L------RGGEVALEIGTGHTAMM 70 (230)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHCCCCCCCTTSCCCCHHH-----HHHH--HHTT-C------CSSCEEEEECCTTTCHH
T ss_pred ceeeecCHHHHHHHHHHHHHHhcCCceecCCCeEeCCCch-----hhhH--hHhh-c------CCCCEEEEcCCCHHHHH
Confidence 4689999999999999999999999999999999998321 1110 1111 1 134699999999 9999
Q ss_pred HHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccccccccCCCCCCCCC
Q 015035 130 YPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAE 209 (414)
Q Consensus 130 ~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (414)
++.++... +.+|+|+|+|+.+++.|++|++.++ + +++++++|...
T Consensus 71 ~~~la~~~-~~~v~~vD~s~~~~~~a~~~~~~~~-~--~v~~~~~d~~~------------------------------- 115 (230)
T 3evz_A 71 ALMAEKFF-NCKVTATEVDEEFFEYARRNIERNN-S--NVRLVKSNGGI------------------------------- 115 (230)
T ss_dssp HHHHHHHH-CCEEEEEECCHHHHHHHHHHHHHTT-C--CCEEEECSSCS-------------------------------
T ss_pred HHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHhC-C--CcEEEeCCchh-------------------------------
Confidence 99988866 7899999999999999999999996 5 78999887421
Q ss_pred CCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccccccccCCCccccCCCCCcccccCChHHHHHHHHHH
Q 015035 210 PSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIED 289 (414)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em~~~GGe~~Fv~rii~e 289 (414)
+..+ .+++||+|+|||||+...+....+|..++.++.. +..++.+++++
T Consensus 116 ----------------------~~~~--~~~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~ 164 (230)
T 3evz_A 116 ----------------------IKGV--VEGTFDVIFSAPPYYDKPLGRVLTEREAIGGGKY-------GEEFSVKLLEE 164 (230)
T ss_dssp ----------------------STTT--CCSCEEEEEECCCCC---------------CCSS-------SCHHHHHHHHH
T ss_pred ----------------------hhhc--ccCceeEEEECCCCcCCccccccChhhhhccCcc-------chHHHHHHHHH
Confidence 1111 1368999999999998776555667777777776 66888999999
Q ss_pred HHHhhccCcEEEEEeCC-cCCHHHHHHHHHHcCCceEEEEEecCCCeeEEEEEEEec
Q 015035 290 SVALKQTFRWYTSMVGR-KSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345 (414)
Q Consensus 290 S~~l~~~~~w~t~mvgk-~~~l~~l~~~l~~~g~~~v~~~e~~qG~t~Rw~lAWsf~ 345 (414)
+..+++++|++.+.+.. ..+...+.+.+++.|+ .++..++.+|...+++++++=.
T Consensus 165 ~~~~LkpgG~l~~~~~~~~~~~~~~~~~l~~~g~-~~~~~~~~~g~~~~~~l~f~~~ 220 (230)
T 3evz_A 165 AFDHLNPGGKVALYLPDKEKLLNVIKERGIKLGY-SVKDIKFKVGTRWRHSLIFFKG 220 (230)
T ss_dssp HGGGEEEEEEEEEEEESCHHHHHHHHHHHHHTTC-EEEEEEECCCC-CEEEEEEECC
T ss_pred HHHHhCCCeEEEEEecccHhHHHHHHHHHHHcCC-ceEEEEecCCCeEEEEEEEecc
Confidence 99999999998776653 4678899999999999 5778899999999998888653
No 3
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.93 E-value=1.7e-25 Score=215.06 Aligned_cols=193 Identities=20% Similarity=0.223 Sum_probs=162.3
Q ss_pred hcCCcEEEecCCCeeCCCCCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHH
Q 015035 71 HDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDV 150 (414)
Q Consensus 71 ~~fgl~~~vp~gvLiPriP~R~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~ 150 (414)
+|||+++.+++++|+|| |++...+.++.+.+. ....+|||+|||+|++++.++...++++++|+|+|+.
T Consensus 76 ~f~~~~~~~~~~~~ipr-~~te~l~~~~l~~~~----------~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~ 144 (276)
T 2b3t_A 76 EFWSLPLFVSPATLIPR-PDTECLVEQALARLP----------EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPD 144 (276)
T ss_dssp EETTEEEECCTTSCCCC-TTHHHHHHHHHHHSC----------SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHH
T ss_pred EECCceEEeCCCCcccC-chHHHHHHHHHHhcc----------cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHH
Confidence 69999999999999999 667777766665543 1235899999999999999998888999999999999
Q ss_pred HHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 015035 151 ALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPP 230 (414)
Q Consensus 151 Al~~A~~N~~~n~~l~~rI~~~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (414)
+++.|++|++.++ +. +++++++|..+
T Consensus 145 ~l~~a~~n~~~~~-~~-~v~~~~~d~~~---------------------------------------------------- 170 (276)
T 2b3t_A 145 AVSLAQRNAQHLA-IK-NIHILQSDWFS---------------------------------------------------- 170 (276)
T ss_dssp HHHHHHHHHHHHT-CC-SEEEECCSTTG----------------------------------------------------
T ss_pred HHHHHHHHHHHcC-CC-ceEEEEcchhh----------------------------------------------------
Confidence 9999999999885 64 68888776421
Q ss_pred ccccccCCCCcEEEEEECCCcccccc------cccCCCccccCCCCCcccccCChHHHHHHHHHHHHHhhccCcEEEEEe
Q 015035 231 VLVGVVRDGEQFDFCICNPPFFESME------EAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMV 304 (414)
Q Consensus 231 il~~~~~~~~~fD~imcNPPy~~s~e------e~~~~P~~a~~g~~~Em~~~GGe~~Fv~rii~eS~~l~~~~~w~t~mv 304 (414)
.. ..++||+|+|||||+...+ ...++|..++.|+.+ ++.++.++++++..+++++|++.+++
T Consensus 171 ---~~--~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~-------g~~~~~~~l~~~~~~LkpgG~l~~~~ 238 (276)
T 2b3t_A 171 ---AL--AGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADS-------GMADIVHIIEQSRNALVSGGFLLLEH 238 (276)
T ss_dssp ---GG--TTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHH-------HTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred ---hc--ccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCc-------HHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 11 1357999999999997644 123689988888776 78999999999999999999998888
Q ss_pred CCcCCHHHHHHHHHHcCCceEEEEEecCCCeeEEEEEE
Q 015035 305 GRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAW 342 (414)
Q Consensus 305 gk~~~l~~l~~~l~~~g~~~v~~~e~~qG~t~Rw~lAW 342 (414)
+ ..+.+.+.+.+++.|+..+.+.+|..|+ .|.++|.
T Consensus 239 ~-~~~~~~~~~~l~~~Gf~~v~~~~d~~g~-~r~~~~~ 274 (276)
T 2b3t_A 239 G-WQQGEAVRQAFILAGYHDVETCRDYGDN-ERVTLGR 274 (276)
T ss_dssp C-SSCHHHHHHHHHHTTCTTCCEEECTTSS-EEEEEEE
T ss_pred C-chHHHHHHHHHHHCCCcEEEEEecCCCC-CcEEEEE
Confidence 8 7889999999999999999999999999 5887775
No 4
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.93 E-value=1.4e-25 Score=218.55 Aligned_cols=186 Identities=19% Similarity=0.266 Sum_probs=152.8
Q ss_pred hhcCCcEEEecCCCeeCCCCCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcH
Q 015035 70 LHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTD 149 (414)
Q Consensus 70 ~~~fgl~~~vp~gvLiPriP~R~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~ 149 (414)
.+|||++|.+.+++|+|| |+++.+++++.+.+... ...+|||||||+|++++.++.. ++++|+|+|+|+
T Consensus 88 ~~f~~~~~~v~~~~lipr-~~te~lv~~~l~~~~~~---------~~~~vLDlG~GsG~~~~~la~~-~~~~v~~vDis~ 156 (284)
T 1nv8_A 88 KEFMGLSFLVEEGVFVPR-PETEELVELALELIRKY---------GIKTVADIGTGSGAIGVSVAKF-SDAIVFATDVSS 156 (284)
T ss_dssp EEETTEEEECCTTSCCCC-TTHHHHHHHHHHHHHHH---------TCCEEEEESCTTSHHHHHHHHH-SSCEEEEEESCH
T ss_pred eEECCeEEEeCCCceecC-hhHHHHHHHHHHHhccc---------CCCEEEEEeCchhHHHHHHHHC-CCCEEEEEECCH
Confidence 369999999999999999 77888888887766421 2358999999999999999998 899999999999
Q ss_pred HHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 015035 150 VALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGP 229 (414)
Q Consensus 150 ~Al~~A~~N~~~n~~l~~rI~~~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (414)
.+++.|++|++.++ +.++++++++|..+
T Consensus 157 ~al~~A~~n~~~~~-l~~~v~~~~~D~~~--------------------------------------------------- 184 (284)
T 1nv8_A 157 KAVEIARKNAERHG-VSDRFFVRKGEFLE--------------------------------------------------- 184 (284)
T ss_dssp HHHHHHHHHHHHTT-CTTSEEEEESSTTG---------------------------------------------------
T ss_pred HHHHHHHHHHHHcC-CCCceEEEECcchh---------------------------------------------------
Confidence 99999999999996 88889999987531
Q ss_pred CccccccCCCCcE---EEEEECCCcccccc----cccCCCccccCCCCCcccccCChHHHHHHHHHHHHHhhccCcEEEE
Q 015035 230 PVLVGVVRDGEQF---DFCICNPPFFESME----EAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTS 302 (414)
Q Consensus 230 ~il~~~~~~~~~f---D~imcNPPy~~s~e----e~~~~P~~a~~g~~~Em~~~GGe~~Fv~rii~eS~~l~~~~~w~t~ 302 (414)
.+ .++| |+|+|||||+...+ +..++|..++.++.+ ++.|+++++. ..++++||+.+
T Consensus 185 -~~------~~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~d-------gl~~~~~i~~---~~l~pgG~l~~ 247 (284)
T 1nv8_A 185 -PF------KEKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGED-------GLDFYREFFG---RYDTSGKIVLM 247 (284)
T ss_dssp -GG------GGGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTT-------SCHHHHHHHH---HCCCTTCEEEE
T ss_pred -hc------ccccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCc-------HHHHHHHHHH---hcCCCCCEEEE
Confidence 01 1357 99999999998654 112678888888877 7788888761 34558999999
Q ss_pred EeCCcCCHHHHHHHHHHcCCceEEEEEecCCCeeEEEEEE
Q 015035 303 MVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAW 342 (414)
Q Consensus 303 mvgk~~~l~~l~~~l~~~g~~~v~~~e~~qG~t~Rw~lAW 342 (414)
++| ..+.+.+.+.+++. .+.+|+.|+. |+++++
T Consensus 248 e~~-~~q~~~v~~~~~~~-----~~~~D~~g~~-R~~~~~ 280 (284)
T 1nv8_A 248 EIG-EDQVEELKKIVSDT-----VFLKDSAGKY-RFLLLN 280 (284)
T ss_dssp ECC-TTCHHHHTTTSTTC-----EEEECTTSSE-EEEEEE
T ss_pred EEC-chHHHHHHHHHHhC-----CeecccCCCc-eEEEEE
Confidence 999 78999999888775 7899999995 887764
No 5
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.88 E-value=1e-23 Score=191.02 Aligned_cols=195 Identities=18% Similarity=0.198 Sum_probs=128.3
Q ss_pred EEecCCCeeCCCCCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHH
Q 015035 77 WWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAE 156 (414)
Q Consensus 77 ~~vp~gvLiPriP~R~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~ 156 (414)
|.+++++++|| |++..++.++.+.+... ....+|||+|||+|.++..++...++++++|+|+|+.+++.|+
T Consensus 1 f~~~~~~~~p~-~~~~~~~~~~~~~l~~~--------~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~ 71 (215)
T 4dzr_A 1 FEVGPDCLIPR-PDTEVLVEEAIRFLKRM--------PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVAR 71 (215)
T ss_dssp CBCSGGGGSCC-HHHHHHHHHHHHHHTTC--------CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC--------
T ss_pred CcCCCCccCCC-ccHHHHHHHHHHHhhhc--------CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHH
Confidence 46889999999 66777777777766431 2346999999999999999999888889999999999999999
Q ss_pred HHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccc
Q 015035 157 KNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVV 236 (414)
Q Consensus 157 ~N~~~n~~l~~rI~~~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~ 236 (414)
+|+..++ + +++++++|..+ .+....
T Consensus 72 ~~~~~~~-~--~~~~~~~d~~~----------------------------------------------------~~~~~~ 96 (215)
T 4dzr_A 72 RNAERFG-A--VVDWAAADGIE----------------------------------------------------WLIERA 96 (215)
T ss_dssp --------------CCHHHHHH----------------------------------------------------HHHHHH
T ss_pred HHHHHhC-C--ceEEEEcchHh----------------------------------------------------hhhhhh
Confidence 9999885 4 67776665321 011000
Q ss_pred CCCCcEEEEEECCCcccccccc-------cCCCccccCCCCCcccccCChHHHHHHHHHHHHHhhccCcE-EEEEeCCcC
Q 015035 237 RDGEQFDFCICNPPFFESMEEA-------GLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRW-YTSMVGRKS 308 (414)
Q Consensus 237 ~~~~~fD~imcNPPy~~s~ee~-------~~~P~~a~~g~~~Em~~~GGe~~Fv~rii~eS~~l~~~~~w-~t~mvgk~~ 308 (414)
...++||+|+|||||+...... .++|..++.++.. ++.++.++++++..+++++|+ +.++++ ..
T Consensus 97 ~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~~~~LkpgG~l~~~~~~-~~ 168 (215)
T 4dzr_A 97 ERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGED-------GLQFYRRMAALPPYVLARGRAGVFLEVG-HN 168 (215)
T ss_dssp HTTCCBSEEEECCCCCC------------------------C-------TTHHHHHHHTCCGGGBCSSSEEEEEECT-TS
T ss_pred hccCcccEEEECCCCCCCccccccChhhhccCccccccCCCc-------HHHHHHHHHHHHHHHhcCCCeEEEEEEC-Cc
Confidence 0136899999999998765422 2467777777666 788999999999999999999 777777 88
Q ss_pred CHHHHHHHHH--HcCCceEEEEEecCCCeeEEEEEEEe
Q 015035 309 NLKFLISKLR--KVGVTIVKTTEFVQGQTCRWGLAWSF 344 (414)
Q Consensus 309 ~l~~l~~~l~--~~g~~~v~~~e~~qG~t~Rw~lAWsf 344 (414)
+...+.+.++ +.|+..+.+.++..|+ .|++++|.-
T Consensus 169 ~~~~~~~~l~~~~~gf~~~~~~~~~~~~-~r~~~~~~~ 205 (215)
T 4dzr_A 169 QADEVARLFAPWRERGFRVRKVKDLRGI-DRVIAVTRE 205 (215)
T ss_dssp CHHHHHHHTGGGGGGTEECCEEECTTSC-EEEEEEEEC
T ss_pred cHHHHHHHHHHhhcCCceEEEEEecCCC-EEEEEEEEc
Confidence 9999999999 9999999999999998 699888864
No 6
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.74 E-value=1.4e-17 Score=158.30 Aligned_cols=149 Identities=21% Similarity=0.233 Sum_probs=103.8
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccc
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~~~p~~~~~~~~~~~~~~ 195 (414)
..+|||+|||+|.+++.++.+.+. +|+|+|+++.+++.|++|++.++ +.++++++++|..+
T Consensus 50 ~~~vLDlG~G~G~~~~~la~~~~~-~v~gvDi~~~~~~~a~~n~~~~~-~~~~v~~~~~D~~~----------------- 110 (259)
T 3lpm_A 50 KGKIIDLCSGNGIIPLLLSTRTKA-KIVGVEIQERLADMAKRSVAYNQ-LEDQIEIIEYDLKK----------------- 110 (259)
T ss_dssp CCEEEETTCTTTHHHHHHHTTCCC-EEEEECCSHHHHHHHHHHHHHTT-CTTTEEEECSCGGG-----------------
T ss_pred CCEEEEcCCchhHHHHHHHHhcCC-cEEEEECCHHHHHHHHHHHHHCC-CcccEEEEECcHHH-----------------
Confidence 468999999999999999887554 99999999999999999999996 88899999887531
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccccccccCCCccccCCCCCcccc
Q 015035 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (414)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em~~ 275 (414)
+...+ ..++||+|+|||||+........+|.....-+..+
T Consensus 111 -----------------------------------~~~~~--~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~--- 150 (259)
T 3lpm_A 111 -----------------------------------ITDLI--PKERADIVTCNPPYFATPDTSLKNTNEHFRIARHE--- 150 (259)
T ss_dssp -----------------------------------GGGTS--CTTCEEEEEECCCC------------------------
T ss_pred -----------------------------------hhhhh--ccCCccEEEECCCCCCCccccCCCCchHHHhhhcc---
Confidence 00001 24689999999999976332222222211112221
Q ss_pred cCChHHHHHHHHHHHHHhhccCcEEEEEeCCcCCHHHHHHHHHHcCCceEEE
Q 015035 276 SGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKT 327 (414)
Q Consensus 276 ~GGe~~Fv~rii~eS~~l~~~~~w~t~mvgk~~~l~~l~~~l~~~g~~~v~~ 327 (414)
...-+..+++.+..+++++|++.+.+. ..++..+...+++.|+...++
T Consensus 151 ---~~~~~~~~l~~~~~~LkpgG~l~~~~~-~~~~~~~~~~l~~~~~~~~~~ 198 (259)
T 3lpm_A 151 ---VMCTLEDTIRVAASLLKQGGKANFVHR-PERLLDIIDIMRKYRLEPKRI 198 (259)
T ss_dssp -----HHHHHHHHHHHHHEEEEEEEEEEEC-TTTHHHHHHHHHHTTEEEEEE
T ss_pred ---ccCCHHHHHHHHHHHccCCcEEEEEEc-HHHHHHHHHHHHHCCCceEEE
Confidence 223466788899999999999876554 889999999999999864443
No 7
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.72 E-value=2.8e-17 Score=157.18 Aligned_cols=170 Identities=15% Similarity=0.116 Sum_probs=112.5
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHH---CCCCCCcEEEEEccCCCCCCcccccccCCcc
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKS---NPHISELIEIRKVDNSESTPSIQESLTGKSV 192 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~---n~~l~~rI~~~~~d~~~~~p~~~~~~~~~~~ 192 (414)
..+|||||||+|++++.|+.+.++.+|+|+|+++.+++.|++|++. ++ +.+++++++.|..+..+
T Consensus 37 ~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~-l~~~v~~~~~D~~~~~~----------- 104 (260)
T 2ozv_A 37 ACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAA-FSARIEVLEADVTLRAK----------- 104 (260)
T ss_dssp CEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTT-TGGGEEEEECCTTCCHH-----------
T ss_pred CCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCC-CcceEEEEeCCHHHHhh-----------
Confidence 4689999999999999999988888999999999999999999998 85 88899999998642000
Q ss_pred ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccccccccCCCccccCCCCCc
Q 015035 193 QDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEE 272 (414)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~E 272 (414)
...... ...++||+|+|||||+..... ..|.....-+.+
T Consensus 105 -------------------------------------~~~~~~-~~~~~fD~Vv~nPPy~~~~~~--~~~~~~~~~a~~- 143 (260)
T 2ozv_A 105 -------------------------------------ARVEAG-LPDEHFHHVIMNPPYNDAGDR--RTPDALKAEAHA- 143 (260)
T ss_dssp -------------------------------------HHHHTT-CCTTCEEEEEECCCC---------------------
T ss_pred -------------------------------------hhhhhc-cCCCCcCEEEECCCCcCCCCC--CCcCHHHHHHhh-
Confidence 000000 024689999999999976411 112111111111
Q ss_pred ccccCChHHHHHHHHHHHHHhhccCcEEEEEeCCcCCHHHHHHHHHHcCCceEEEEEecC--CCe-eEEEEEEEec
Q 015035 273 MVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQ--GQT-CRWGLAWSFV 345 (414)
Q Consensus 273 m~~~GGe~~Fv~rii~eS~~l~~~~~w~t~mvgk~~~l~~l~~~l~~~g~~~v~~~e~~q--G~t-~Rw~lAWsf~ 345 (414)
+....+..+++.+..+++++|++.+.++ ..++.++.+.+++. +..+++..... ++. .|.++.+...
T Consensus 144 -----~~~~~~~~~l~~~~~~LkpgG~l~~~~~-~~~~~~~~~~l~~~-~~~~~i~~v~~~~~~~~~~~lv~~~k~ 212 (260)
T 2ozv_A 144 -----MTEGLFEDWIRTASAIMVSGGQLSLISR-PQSVAEIIAACGSR-FGGLEITLIHPRPGEDAVRMLVTAIKG 212 (260)
T ss_dssp --------CCHHHHHHHHHHHEEEEEEEEEEEC-GGGHHHHHHHHTTT-EEEEEEEEEESSTTSCCCEEEEEEEET
T ss_pred -----cCcCCHHHHHHHHHHHcCCCCEEEEEEc-HHHHHHHHHHHHhc-CCceEEEEEcCCCCCCceEEEEEEEeC
Confidence 0112256788888899999999877666 77899999999875 76666555432 332 3444555543
No 8
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.68 E-value=7.6e-16 Score=137.77 Aligned_cols=155 Identities=18% Similarity=0.167 Sum_probs=110.7
Q ss_pred CCeeCCCCCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHH
Q 015035 82 GQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKS 161 (414)
Q Consensus 82 gvLiPriP~R~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~ 161 (414)
.+++|+ |.+...+.++... . ..+.+|||+|||+|.++..|+... +++|+|+|+.+++.
T Consensus 2 ~v~~P~-~~~~~l~~~l~~~-~----------~~~~~vLD~GcG~G~~~~~l~~~~---~v~gvD~s~~~~~~------- 59 (170)
T 3q87_B 2 DWYEPG-EDTYTLMDALERE-G----------LEMKIVLDLGTSTGVITEQLRKRN---TVVSTDLNIRALES------- 59 (170)
T ss_dssp CSCCCC-HHHHHHHHHHHHH-T----------CCSCEEEEETCTTCHHHHHHTTTS---EEEEEESCHHHHHT-------
T ss_pred cccCcC-ccHHHHHHHHHhh-c----------CCCCeEEEeccCccHHHHHHHhcC---cEEEEECCHHHHhc-------
Confidence 478898 5444444432211 1 123599999999999999988754 99999999999987
Q ss_pred CCCCCCcEEEEEccCCCCCCcccccccCCccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCc
Q 015035 162 NPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQ 241 (414)
Q Consensus 162 n~~l~~rI~~~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~ 241 (414)
. .+++++++|..+ .. .+++
T Consensus 60 ~----~~~~~~~~d~~~-------------------------------------------------------~~--~~~~ 78 (170)
T 3q87_B 60 H----RGGNLVRADLLC-------------------------------------------------------SI--NQES 78 (170)
T ss_dssp C----SSSCEEECSTTT-------------------------------------------------------TB--CGGG
T ss_pred c----cCCeEEECChhh-------------------------------------------------------hc--ccCC
Confidence 1 246788877431 00 1368
Q ss_pred EEEEEECCCcccccccccCCCccccCCCCCcccccCChHHHHHHHHHHHHHhhccCcEEEEEeCCcCCHHHHHHHHHHcC
Q 015035 242 FDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVG 321 (414)
Q Consensus 242 fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em~~~GGe~~Fv~rii~eS~~l~~~~~w~t~mvgk~~~l~~l~~~l~~~g 321 (414)
||+|+|||||+...+... ..++.+ ...++.++++.. ++|++.+......+.+.+.+.|++.|
T Consensus 79 fD~i~~n~~~~~~~~~~~------~~~~~~-------~~~~~~~~~~~l-----pgG~l~~~~~~~~~~~~l~~~l~~~g 140 (170)
T 3q87_B 79 VDVVVFNPPYVPDTDDPI------IGGGYL-------GREVIDRFVDAV-----TVGMLYLLVIEANRPKEVLARLEERG 140 (170)
T ss_dssp CSEEEECCCCBTTCCCTT------TBCCGG-------GCHHHHHHHHHC-----CSSEEEEEEEGGGCHHHHHHHHHHTT
T ss_pred CCEEEECCCCccCCcccc------ccCCcc-------hHHHHHHHHhhC-----CCCEEEEEEecCCCHHHHHHHHHHCC
Confidence 999999999997643211 233333 567777777665 77777666655889999999999999
Q ss_pred CceEEEEEecCCCeeEE
Q 015035 322 VTIVKTTEFVQGQTCRW 338 (414)
Q Consensus 322 ~~~v~~~e~~qG~t~Rw 338 (414)
+..+.+.+...|.. |-
T Consensus 141 f~~~~~~~~~~~~e-~~ 156 (170)
T 3q87_B 141 YGTRILKVRKILGE-TV 156 (170)
T ss_dssp CEEEEEEEEECSSS-EE
T ss_pred CcEEEEEeeccCCc-eE
Confidence 99999999988874 53
No 9
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.63 E-value=6.6e-15 Score=140.98 Aligned_cols=171 Identities=14% Similarity=0.093 Sum_probs=128.5
Q ss_pred HhhhcCCcEEEecCC--CeeCCCCCcHhHHHHHH------------HHHccCCCCCCCCCCCCCeEEEECCcccHHHHHH
Q 015035 68 LLLHDHGLNWWIPDG--QLCPTVPNRSNYIHWIE------------DLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLL 133 (414)
Q Consensus 68 LL~~~fgl~~~vp~g--vLiPriP~R~~yi~~i~------------dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~i~L 133 (414)
++-.+||..+.++.+ +++|+ |.+..|...+. .++.... -....+|||+|||+|.+++.+
T Consensus 58 i~g~~~g~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~i~~~~~------~~~~~~VLDiG~G~G~~~~~l 130 (277)
T 1o54_A 58 VFEKGPGEIIRTSAGKKGYILI-PSLIDEIMNMKRRTQIVYPKDSSFIAMMLD------VKEGDRIIDTGVGSGAMCAVL 130 (277)
T ss_dssp HTTSCTTCEEECTTCCEEEEEC-CCHHHHHHTCCC-CCCCCHHHHHHHHHHTT------CCTTCEEEEECCTTSHHHHHH
T ss_pred hcCCCCCcEEEEcCCcEEEEeC-CCHHHHHhhccccCCccCHHHHHHHHHHhC------CCCCCEEEEECCcCCHHHHHH
Confidence 455689999999998 88998 66666653211 0111100 123468999999999999999
Q ss_pred HHH-hcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccccccccCCCCCCCCCCCC
Q 015035 134 GAS-LLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSS 212 (414)
Q Consensus 134 a~~-~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (414)
+.. .++.+++++|+++.+++.|++|++.++ +.++++++..|..+
T Consensus 131 a~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~---------------------------------- 175 (277)
T 1o54_A 131 ARAVGSSGKVFAYEKREEFAKLAESNLTKWG-LIERVTIKVRDISE---------------------------------- 175 (277)
T ss_dssp HHHTTTTCEEEEECCCHHHHHHHHHHHHHTT-CGGGEEEECCCGGG----------------------------------
T ss_pred HHHhCCCcEEEEEECCHHHHHHHHHHHHHcC-CCCCEEEEECCHHH----------------------------------
Confidence 987 467899999999999999999999985 76789888776321
Q ss_pred CCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccccccccCCCccccCCCCCcccccCChHHHHHHHHHHHHH
Q 015035 213 SSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVA 292 (414)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em~~~GGe~~Fv~rii~eS~~ 292 (414)
. . ..++||+|++|||.. ..++++...
T Consensus 176 ---------------------~-~-~~~~~D~V~~~~~~~-------------------------------~~~l~~~~~ 201 (277)
T 1o54_A 176 ---------------------G-F-DEKDVDALFLDVPDP-------------------------------WNYIDKCWE 201 (277)
T ss_dssp ---------------------C-C-SCCSEEEEEECCSCG-------------------------------GGTHHHHHH
T ss_pred ---------------------c-c-cCCccCEEEECCcCH-------------------------------HHHHHHHHH
Confidence 1 1 135799999999742 123455566
Q ss_pred hhccCcEEEEEeCCcCCHHHHHHHHHHcCCceEEEEEecCCC
Q 015035 293 LKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQ 334 (414)
Q Consensus 293 l~~~~~w~t~mvgk~~~l~~l~~~l~~~g~~~v~~~e~~qG~ 334 (414)
+++++|++.+......++..+.+.|++.|+..+++.++..+.
T Consensus 202 ~L~pgG~l~~~~~~~~~~~~~~~~l~~~gf~~~~~~~~~~~~ 243 (277)
T 1o54_A 202 ALKGGGRFATVCPTTNQVQETLKKLQELPFIRIEVWESLFRP 243 (277)
T ss_dssp HEEEEEEEEEEESSHHHHHHHHHHHHHSSEEEEEEECCCCCC
T ss_pred HcCCCCEEEEEeCCHHHHHHHHHHHHHCCCceeEEEEEeeee
Confidence 788999988888866788999999999999988888877544
No 10
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.57 E-value=9.2e-14 Score=139.87 Aligned_cols=140 Identities=15% Similarity=0.122 Sum_probs=105.0
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccc
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~~~p~~~~~~~~~~~~~~ 195 (414)
..+|||+|||+|.+++.++...+..+|+|+|+|+.+++.|++|++.++ +.++|++++.|..+
T Consensus 218 ~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~g-l~~~i~~~~~D~~~----------------- 279 (373)
T 3tm4_A 218 GGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAG-VLDKIKFIQGDATQ----------------- 279 (373)
T ss_dssp SCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTT-CGGGCEEEECCGGG-----------------
T ss_pred CCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcC-CCCceEEEECChhh-----------------
Confidence 468999999999999998876554599999999999999999999996 87889999987531
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccccccccCCCccccCCCCCcccc
Q 015035 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (414)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em~~ 275 (414)
+ ....++||+|+|||||...... ..+
T Consensus 280 ------------------------------------~---~~~~~~fD~Ii~npPyg~r~~~------------~~~--- 305 (373)
T 3tm4_A 280 ------------------------------------L---SQYVDSVDFAISNLPYGLKIGK------------KSM--- 305 (373)
T ss_dssp ------------------------------------G---GGTCSCEEEEEEECCCC------------------CC---
T ss_pred ------------------------------------C---CcccCCcCEEEECCCCCcccCc------------chh---
Confidence 0 0123689999999999753211 110
Q ss_pred cCChHHHHHHHHHHHHHhhccCcEEEEEeCCcCCHHHHHHHHHHcCCceEEEEEecCCCe
Q 015035 276 SGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQT 335 (414)
Q Consensus 276 ~GGe~~Fv~rii~eS~~l~~~~~w~t~mvgk~~~l~~l~~~l~~~g~~~v~~~e~~qG~t 335 (414)
-..++.+++++...++ ++|...... +...+.+.+.+.|+...+......|..
T Consensus 306 ---~~~ly~~~~~~l~r~l--~g~~~~i~~---~~~~~~~~~~~~G~~~~~~~~~~nG~l 357 (373)
T 3tm4_A 306 ---IPDLYMKFFNELAKVL--EKRGVFITT---EKKAIEEAIAENGFEIIHHRVIGHGGL 357 (373)
T ss_dssp ---HHHHHHHHHHHHHHHE--EEEEEEEES---CHHHHHHHHHHTTEEEEEEEEEEETTE
T ss_pred ---HHHHHHHHHHHHHHHc--CCeEEEEEC---CHHHHHHHHHHcCCEEEEEEEEEcCCE
Confidence 2356788888888766 445444443 567777888999999888888888874
No 11
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.56 E-value=3.4e-14 Score=127.95 Aligned_cols=94 Identities=9% Similarity=0.012 Sum_probs=71.3
Q ss_pred hcCCcEEEecCCCeeCCCCCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHH
Q 015035 71 HDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDV 150 (414)
Q Consensus 71 ~~fgl~~~vp~gvLiPriP~R~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~ 150 (414)
.+.|..+.+|+ ..+| |.......++.+.+.... .....+|||+|||+|.+++.++. ....+|+|+|+|+.
T Consensus 9 ~~~g~~l~~~~--~~~r-p~~~~~~~~l~~~l~~~~------~~~~~~vLDlgcG~G~~~~~~~~-~~~~~v~~vD~~~~ 78 (189)
T 3p9n_A 9 VAGGRRIAVPP--RGTR-PTTDRVRESLFNIVTARR------DLTGLAVLDLYAGSGALGLEALS-RGAASVLFVESDQR 78 (189)
T ss_dssp TTTTCEEECCS--CCC----CHHHHHHHHHHHHHHS------CCTTCEEEEETCTTCHHHHHHHH-TTCSEEEEEECCHH
T ss_pred ccCCcEecCCC--CCCc-cCcHHHHHHHHHHHHhcc------CCCCCEEEEeCCCcCHHHHHHHH-CCCCeEEEEECCHH
Confidence 47788999998 5666 556666667766665310 01346899999999999987665 34568999999999
Q ss_pred HHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 151 ALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 151 Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
+++.|++|++.++ + ++++++++|.
T Consensus 79 ~~~~a~~~~~~~~-~-~~v~~~~~d~ 102 (189)
T 3p9n_A 79 SAAVIARNIEALG-L-SGATLRRGAV 102 (189)
T ss_dssp HHHHHHHHHHHHT-C-SCEEEEESCH
T ss_pred HHHHHHHHHHHcC-C-CceEEEEccH
Confidence 9999999999986 6 6899999874
No 12
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.56 E-value=6.7e-15 Score=130.82 Aligned_cols=95 Identities=17% Similarity=0.071 Sum_probs=78.2
Q ss_pred hhcCCcEEEecCCCeeCCCCCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcH
Q 015035 70 LHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTD 149 (414)
Q Consensus 70 ~~~fgl~~~vp~gvLiPriP~R~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~ 149 (414)
-+++|+.+.+|++. .|| |....+..++.+.+... ....+|||+|||+|.+++.++. .+..+|+|+|+|+
T Consensus 9 g~~~~~~~~~~~~~-~~r-p~~~~~~~~~~~~l~~~--------~~~~~vLD~GcG~G~~~~~~~~-~~~~~v~~vD~~~ 77 (187)
T 2fhp_A 9 GEYGGRRLKALDGD-NTR-PTTDKVKESIFNMIGPY--------FDGGMALDLYSGSGGLAIEAVS-RGMDKSICIEKNF 77 (187)
T ss_dssp STTTTCBCCCCCCC-SSC-CCCHHHHHHHHHHHCSC--------CSSCEEEETTCTTCHHHHHHHH-TTCSEEEEEESCH
T ss_pred ccccCccccCCCCC-CcC-cCHHHHHHHHHHHHHhh--------cCCCCEEEeCCccCHHHHHHHH-cCCCEEEEEECCH
Confidence 46889999999887 777 66777888877777531 1346899999999999988776 4557999999999
Q ss_pred HHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 150 VALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 150 ~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
.+++.|++|++.++ +.++++++++|.
T Consensus 78 ~~~~~a~~~~~~~~-~~~~~~~~~~d~ 103 (187)
T 2fhp_A 78 AALKVIKENIAITK-EPEKFEVRKMDA 103 (187)
T ss_dssp HHHHHHHHHHHHHT-CGGGEEEEESCH
T ss_pred HHHHHHHHHHHHhC-CCcceEEEECcH
Confidence 99999999999985 777899998874
No 13
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.55 E-value=5.9e-14 Score=139.56 Aligned_cols=143 Identities=18% Similarity=0.143 Sum_probs=105.9
Q ss_pred CCeEEEECCcccHHHHHHHHHh-cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCcccc
Q 015035 116 KVKGFDIGTGANCIYPLLGASL-LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~-~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~~~p~~~~~~~~~~~~~ 194 (414)
..++||+|||+|.+.+.++... ++.+++|+|+|+.+++.|++|++.++ +. +|++++.|..+
T Consensus 204 ~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g-~~-~i~~~~~D~~~---------------- 265 (354)
T 3tma_A 204 GMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASG-LS-WIRFLRADARH---------------- 265 (354)
T ss_dssp TCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTT-CT-TCEEEECCGGG----------------
T ss_pred CCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcC-CC-ceEEEeCChhh----------------
Confidence 4689999999999999998877 78899999999999999999999996 76 89999887531
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccccccccCCCccccCCCCCccc
Q 015035 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMV 274 (414)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em~ 274 (414)
+ ....+.||+|+|||||...... ..
T Consensus 266 -------------------------------------~---~~~~~~~D~Ii~npPyg~r~~~------------~~--- 290 (354)
T 3tma_A 266 -------------------------------------L---PRFFPEVDRILANPPHGLRLGR------------KE--- 290 (354)
T ss_dssp -------------------------------------G---GGTCCCCSEEEECCCSCC----------------CH---
T ss_pred -------------------------------------C---ccccCCCCEEEECCCCcCccCC------------cc---
Confidence 0 0113458999999999643211 11
Q ss_pred ccCChHHHHHHHHHHHHHhhccCcEEEEEeCCcCCHHHHHHHHHHcCCceEEEEEecCCCeeEE
Q 015035 275 CSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRW 338 (414)
Q Consensus 275 ~~GGe~~Fv~rii~eS~~l~~~~~w~t~mvgk~~~l~~l~~~l~~~g~~~v~~~e~~qG~t~Rw 338 (414)
.-..++..++++...+++++|.+.+..+ +...+...++ .|+...+......|...+.
T Consensus 291 ---~~~~~~~~~~~~~~~~LkpgG~l~i~t~---~~~~~~~~~~-~g~~~~~~~~l~~g~l~~~ 347 (354)
T 3tma_A 291 ---GLFHLYWDFLRGALALLPPGGRVALLTL---RPALLKRALP-PGFALRHARVVEQGGVYPR 347 (354)
T ss_dssp ---HHHHHHHHHHHHHHHTSCTTCEEEEEES---CHHHHHHHCC-TTEEEEEEEECCBTTBCCE
T ss_pred ---cHHHHHHHHHHHHHHhcCCCcEEEEEeC---CHHHHHHHhh-cCcEEEEEEEEEeCCEEEE
Confidence 1346788899999988888887766655 2333444444 8888777777778876554
No 14
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.55 E-value=1.9e-13 Score=121.04 Aligned_cols=161 Identities=20% Similarity=0.211 Sum_probs=116.4
Q ss_pred EEEecCCCeeCCCCCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHH
Q 015035 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWA 155 (414)
Q Consensus 76 ~~~vp~gvLiPriP~R~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A 155 (414)
.+..+.+.+.|+... ....++.+.+.. ....+|||+|||+|.++..++.. +.+++|+|+++.+++.|
T Consensus 24 ~~~~~~~~~~~~~~~--~~~~~l~~~~~~---------~~~~~vLdiG~G~G~~~~~~~~~--~~~v~~~D~~~~~~~~a 90 (194)
T 1dus_A 24 KFKTDSGVFSYGKVD--KGTKILVENVVV---------DKDDDILDLGCGYGVIGIALADE--VKSTTMADINRRAIKLA 90 (194)
T ss_dssp EEEEETTSTTTTSCC--HHHHHHHHHCCC---------CTTCEEEEETCTTSHHHHHHGGG--SSEEEEEESCHHHHHHH
T ss_pred EEEeCCCcCCccccc--hHHHHHHHHccc---------CCCCeEEEeCCCCCHHHHHHHHc--CCeEEEEECCHHHHHHH
Confidence 356677888876321 223334444432 13468999999999999888875 78999999999999999
Q ss_pred HHHHHHCCCCCC-cEEEEEccCCCCCCcccccccCCccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccc
Q 015035 156 EKNVKSNPHISE-LIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVG 234 (414)
Q Consensus 156 ~~N~~~n~~l~~-rI~~~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~ 234 (414)
++|+..++ +.+ +++++..|..+ .+
T Consensus 91 ~~~~~~~~-~~~~~~~~~~~d~~~----------------------------------------------------~~-- 115 (194)
T 1dus_A 91 KENIKLNN-LDNYDIRVVHSDLYE----------------------------------------------------NV-- 115 (194)
T ss_dssp HHHHHHTT-CTTSCEEEEECSTTT----------------------------------------------------TC--
T ss_pred HHHHHHcC-CCccceEEEECchhc----------------------------------------------------cc--
Confidence 99999885 654 69998887431 00
Q ss_pred ccCCCCcEEEEEECCCcccccccccCCCccccCCCCCcccccCChHHHHHHHHHHHHHhhccCcEEEEEeCCcCCHHHHH
Q 015035 235 VVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLI 314 (414)
Q Consensus 235 ~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em~~~GGe~~Fv~rii~eS~~l~~~~~w~t~mvgk~~~l~~l~ 314 (414)
..++||+|+|||||.. .......++++...+++++|++.+..........+.
T Consensus 116 ---~~~~~D~v~~~~~~~~-------------------------~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~ 167 (194)
T 1dus_A 116 ---KDRKYNKIITNPPIRA-------------------------GKEVLHRIIEEGKELLKDNGEIWVVIQTKQGAKSLA 167 (194)
T ss_dssp ---TTSCEEEEEECCCSTT-------------------------CHHHHHHHHHHHHHHEEEEEEEEEEEESTHHHHHHH
T ss_pred ---ccCCceEEEECCCccc-------------------------chhHHHHHHHHHHHHcCCCCEEEEEECCCCChHHHH
Confidence 1357999999999963 122355677777888889998877776566677788
Q ss_pred HHHHHcCCceEEEEEecCC
Q 015035 315 SKLRKVGVTIVKTTEFVQG 333 (414)
Q Consensus 315 ~~l~~~g~~~v~~~e~~qG 333 (414)
+.|++. +..+++.....|
T Consensus 168 ~~l~~~-~~~~~~~~~~~~ 185 (194)
T 1dus_A 168 KYMKDV-FGNVETVTIKGG 185 (194)
T ss_dssp HHHHHH-HSCCEEEEEETT
T ss_pred HHHHHH-hcceEEEecCCc
Confidence 888887 556676665544
No 15
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.54 E-value=5.4e-14 Score=129.28 Aligned_cols=143 Identities=10% Similarity=0.097 Sum_probs=106.3
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccc
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~~~p~~~~~~~~~~~~~~ 195 (414)
..+|||||||+|.+++.++...|+.+++|+|+++.+++.|++|++.++ + .++.++++|..+
T Consensus 42 ~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~-~-~~v~~~~~d~~~----------------- 102 (214)
T 1yzh_A 42 NPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVG-V-PNIKLLWVDGSD----------------- 102 (214)
T ss_dssp CCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHC-C-SSEEEEECCSSC-----------------
T ss_pred CCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcC-C-CCEEEEeCCHHH-----------------
Confidence 468999999999999999999899999999999999999999999885 6 579999887531
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccccccccCCCccccCCCCCcccc
Q 015035 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (414)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em~~ 275 (414)
+.... ..++||+|+||+|--.. ....+++.
T Consensus 103 ------------------------------------~~~~~-~~~~~D~i~~~~~~~~~--~~~~~~~~----------- 132 (214)
T 1yzh_A 103 ------------------------------------LTDYF-EDGEIDRLYLNFSDPWP--KKRHEKRR----------- 132 (214)
T ss_dssp ------------------------------------GGGTS-CTTCCSEEEEESCCCCC--SGGGGGGS-----------
T ss_pred ------------------------------------HHhhc-CCCCCCEEEEECCCCcc--ccchhhhc-----------
Confidence 00001 24579999999873210 00111110
Q ss_pred cCChHHHHHHHHHHHHHhhccCcEEEEEeCCcCCHHHHHHHHHHcCCceEEEEEecC
Q 015035 276 SGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQ 332 (414)
Q Consensus 276 ~GGe~~Fv~rii~eS~~l~~~~~w~t~mvgk~~~l~~l~~~l~~~g~~~v~~~e~~q 332 (414)
.....++++...+++++|++.+..........+.+.+.+.|+..+.+..|+.
T Consensus 133 -----~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~d~~ 184 (214)
T 1yzh_A 133 -----LTYKTFLDTFKRILPENGEIHFKTDNRGLFEYSLVSFSQYGMKLNGVWLDLH 184 (214)
T ss_dssp -----TTSHHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHHTCEEEEEESSGG
T ss_pred -----cCCHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHCCCeeeecccccc
Confidence 1245667777888899999877776556678888999999998777766653
No 16
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.51 E-value=2.7e-13 Score=137.06 Aligned_cols=120 Identities=18% Similarity=0.146 Sum_probs=89.2
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCC--cEEEEEccCCCCCCcccccccCCccc
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISE--LIEIRKVDNSESTPSIQESLTGKSVQ 193 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~--rI~~~~~d~~~~~p~~~~~~~~~~~~ 193 (414)
..+|||+|||+|.+++.++...|+.+|+|+|+|+.+++.|++|++.|+ +.+ +++++..|..+
T Consensus 223 ~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ng-l~~~~~v~~~~~D~~~--------------- 286 (375)
T 4dcm_A 223 EGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNM-PEALDRCEFMINNALS--------------- 286 (375)
T ss_dssp CSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHC-GGGGGGEEEEECSTTT---------------
T ss_pred CCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcC-CCcCceEEEEechhhc---------------
Confidence 369999999999999999998889999999999999999999999996 764 47778776431
Q ss_pred cccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccccccccCCCccccCCCCCcc
Q 015035 194 DESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEM 273 (414)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em 273 (414)
.+ ..++||+|+|||||+..... ..
T Consensus 287 ----------------------------------------~~--~~~~fD~Ii~nppfh~~~~~-----------~~--- 310 (375)
T 4dcm_A 287 ----------------------------------------GV--EPFRFNAVLCNPPFHQQHAL-----------TD--- 310 (375)
T ss_dssp ----------------------------------------TC--CTTCEEEEEECCCC------------------C---
T ss_pred ----------------------------------------cC--CCCCeeEEEECCCcccCccc-----------CH---
Confidence 11 24689999999999753211 01
Q ss_pred cccCChHHHHHHHHHHHHHhhccCcEEEEEeCCcCCHHHHH
Q 015035 274 VCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLI 314 (414)
Q Consensus 274 ~~~GGe~~Fv~rii~eS~~l~~~~~w~t~mvgk~~~l~~l~ 314 (414)
....++++++..+++++|.+.+...+........
T Consensus 311 -------~~~~~~l~~~~~~LkpgG~l~iv~n~~~~~~~~l 344 (375)
T 4dcm_A 311 -------NVAWEMFHHARRCLKINGELYIVANRHLDYFHKL 344 (375)
T ss_dssp -------CHHHHHHHHHHHHEEEEEEEEEEEETTSCHHHHH
T ss_pred -------HHHHHHHHHHHHhCCCCcEEEEEEECCcCHHHHH
Confidence 1233678888888899998877666555554443
No 17
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.50 E-value=7.6e-14 Score=121.98 Aligned_cols=92 Identities=13% Similarity=0.099 Sum_probs=71.7
Q ss_pred hhhcCCcEEEecCCCeeCCCCCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCcccHHHHHHHHHhcCCeeEEecCc
Q 015035 69 LLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMT 148 (414)
Q Consensus 69 L~~~fgl~~~vp~gvLiPriP~R~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis 148 (414)
--.++|..+.++++ ++ |....+..++.+.+... + ....+|||+|||+|.++..++... .+++|+|+|
T Consensus 6 ~g~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~-~------~~~~~vLD~GcG~G~~~~~l~~~~--~~v~~vD~~ 72 (171)
T 1ws6_A 6 GGKARGVALKVPAS---AR-PSPVRLRKALFDYLRLR-Y------PRRGRFLDPFAGSGAVGLEAASEG--WEAVLVEKD 72 (171)
T ss_dssp SGGGTTCEECCCTT---CC-CCCHHHHHHHHHHHHHH-C------TTCCEEEEETCSSCHHHHHHHHTT--CEEEEECCC
T ss_pred ecccCCeEecCCCC---CC-CCHHHHHHHHHHHHHhh-c------cCCCeEEEeCCCcCHHHHHHHHCC--CeEEEEeCC
Confidence 35688999999999 55 55666776666666431 0 024689999999999999888754 359999999
Q ss_pred HHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 149 DVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 149 ~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
+.+++.|++|++.++ + ++++++.|.
T Consensus 73 ~~~~~~a~~~~~~~~-~--~~~~~~~d~ 97 (171)
T 1ws6_A 73 PEAVRLLKENVRRTG-L--GARVVALPV 97 (171)
T ss_dssp HHHHHHHHHHHHHHT-C--CCEEECSCH
T ss_pred HHHHHHHHHHHHHcC-C--ceEEEeccH
Confidence 999999999999885 5 688887763
No 18
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.50 E-value=2.6e-13 Score=135.01 Aligned_cols=173 Identities=13% Similarity=0.149 Sum_probs=115.5
Q ss_pred cCCcEEEecCCCeeCC--CCCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcH
Q 015035 72 DHGLNWWIPDGQLCPT--VPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTD 149 (414)
Q Consensus 72 ~fgl~~~vp~gvLiPr--iP~R~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~ 149 (414)
..|+.|.+++...-.+ .|.......|+.+++... ++..+|||+|||+|.+++.++.. +++|+|+|+|+
T Consensus 116 e~g~~f~v~~~~~~~tg~f~dq~~~~~~l~~~~~~~--------~~~~~VLDlgcGtG~~sl~la~~--ga~V~~VD~s~ 185 (332)
T 2igt_A 116 LLGVEFLGRFTAFRHVGVFPEQIVHWEWLKNAVETA--------DRPLKVLNLFGYTGVASLVAAAA--GAEVTHVDASK 185 (332)
T ss_dssp ETTEEEEEECCSSSCCSCCGGGHHHHHHHHHHHHHS--------SSCCEEEEETCTTCHHHHHHHHT--TCEEEEECSCH
T ss_pred ECCEEEEEecCccccceechHHHHHHHHHHHHHHhc--------CCCCcEEEcccccCHHHHHHHHc--CCEEEEEECCH
Confidence 4677888777654443 344555556677666421 13468999999999999988874 55999999999
Q ss_pred HHHHHHHHHHHHCCCCCC-cEEEEEccCCCCCCcccccccCCccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 015035 150 VALEWAEKNVKSNPHISE-LIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHG 228 (414)
Q Consensus 150 ~Al~~A~~N~~~n~~l~~-rI~~~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (414)
.+++.|++|++.|+ +.+ ++++++.|..+
T Consensus 186 ~al~~a~~n~~~~g-l~~~~v~~i~~D~~~-------------------------------------------------- 214 (332)
T 2igt_A 186 KAIGWAKENQVLAG-LEQAPIRWICEDAMK-------------------------------------------------- 214 (332)
T ss_dssp HHHHHHHHHHHHHT-CTTSCEEEECSCHHH--------------------------------------------------
T ss_pred HHHHHHHHHHHHcC-CCccceEEEECcHHH--------------------------------------------------
Confidence 99999999999996 766 59998876421
Q ss_pred CCccccccCCCCcEEEEEECCCcccccccccCCCccccCCCCCcccccCChHHHHHHHHHHHHHhhccCcEEEEEeCCcC
Q 015035 229 PPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKS 308 (414)
Q Consensus 229 ~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em~~~GGe~~Fv~rii~eS~~l~~~~~w~t~mvgk~~ 308 (414)
++.......++||+|+||||||...... ++. .....+..+++.+..+++++|++.+......
T Consensus 215 --~l~~~~~~~~~fD~Ii~dPP~~~~~~~~-------------~~~---~~~~~~~~ll~~~~~~LkpgG~lli~~~~~~ 276 (332)
T 2igt_A 215 --FIQREERRGSTYDIILTDPPKFGRGTHG-------------EVW---QLFDHLPLMLDICREILSPKALGLVLTAYSI 276 (332)
T ss_dssp --HHHHHHHHTCCBSEEEECCCSEEECTTC-------------CEE---EHHHHHHHHHHHHHHTBCTTCCEEEEEECCT
T ss_pred --HHHHHHhcCCCceEEEECCccccCCchH-------------HHH---HHHHHHHHHHHHHHHhcCcCcEEEEEECCCC
Confidence 1111001135899999999988643110 000 1345677888888899999998655554222
Q ss_pred --CHHHHHHHHH----HcCCc
Q 015035 309 --NLKFLISKLR----KVGVT 323 (414)
Q Consensus 309 --~l~~l~~~l~----~~g~~ 323 (414)
....+.+.++ +.|..
T Consensus 277 ~~~~~~~~~~l~~a~~~~g~~ 297 (332)
T 2igt_A 277 RASFYSMHELMRETMRGAGGV 297 (332)
T ss_dssp TSCHHHHHHHHHHHTTTSCSE
T ss_pred CCCHHHHHHHHHHHHHHcCCe
Confidence 3445555555 55654
No 19
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.49 E-value=1.3e-13 Score=132.15 Aligned_cols=124 Identities=17% Similarity=0.149 Sum_probs=99.2
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccc
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~~~p~~~~~~~~~~~~~~ 195 (414)
..+|||||||+|+|++.|++..+..+|+|+|+|+.+++.|++|++.|+ +.++|+++++|..+
T Consensus 22 g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~g-l~~~I~v~~gD~l~----------------- 83 (244)
T 3gnl_A 22 NERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSG-LTEQIDVRKGNGLA----------------- 83 (244)
T ss_dssp SEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTT-CTTTEEEEECSGGG-----------------
T ss_pred CCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC-CCceEEEEecchhh-----------------
Confidence 358999999999999999988777799999999999999999999996 98999999987431
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccccccccCCCccccCCCCCcccc
Q 015035 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (414)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em~~ 275 (414)
.+ .++++||+|+. ++
T Consensus 84 --------------------------------------~~-~~~~~~D~Ivi----------ag---------------- 98 (244)
T 3gnl_A 84 --------------------------------------VI-EKKDAIDTIVI----------AG---------------- 98 (244)
T ss_dssp --------------------------------------GC-CGGGCCCEEEE----------EE----------------
T ss_pred --------------------------------------cc-CccccccEEEE----------eC----------------
Confidence 11 11235998873 11
Q ss_pred cCChHHHHHHHHHHHHHhhccCcEEEEEeCCcCCHHHHHHHHHHcCCceEE
Q 015035 276 SGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVK 326 (414)
Q Consensus 276 ~GGe~~Fv~rii~eS~~l~~~~~w~t~mvgk~~~l~~l~~~l~~~g~~~v~ 326 (414)
-+-..+.+|++++...+++++|| .+........+.+.|.+.||..+.
T Consensus 99 --mGg~lI~~IL~~~~~~L~~~~~l--Ilq~~~~~~~lr~~L~~~Gf~i~~ 145 (244)
T 3gnl_A 99 --MGGTLIRTILEEGAAKLAGVTKL--ILQPNIAAWQLREWSEQNNWLITS 145 (244)
T ss_dssp --ECHHHHHHHHHHTGGGGTTCCEE--EEEESSCHHHHHHHHHHHTEEEEE
T ss_pred --CchHHHHHHHHHHHHHhCCCCEE--EEEcCCChHHHHHHHHHCCCEEEE
Confidence 12367899999998888888886 334467899999999999987544
No 20
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.48 E-value=2e-13 Score=129.89 Aligned_cols=124 Identities=15% Similarity=0.142 Sum_probs=98.3
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccc
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~~~p~~~~~~~~~~~~~~ 195 (414)
..+|+|||||||+|++.|++..+..+|+|+|+++.+++.|++|++.|+ +.++|+++++|..+
T Consensus 22 g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~g-l~~~I~~~~gD~l~----------------- 83 (230)
T 3lec_A 22 GARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHG-LTSKIDVRLANGLS----------------- 83 (230)
T ss_dssp TEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTT-CTTTEEEEECSGGG-----------------
T ss_pred CCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC-CCCcEEEEECchhh-----------------
Confidence 358999999999999999988777799999999999999999999996 99999999987431
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccccccccCCCccccCCCCCcccc
Q 015035 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (414)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em~~ 275 (414)
.+ .++++||+|+. ++
T Consensus 84 --------------------------------------~~-~~~~~~D~Ivi----------aG---------------- 98 (230)
T 3lec_A 84 --------------------------------------AF-EEADNIDTITI----------CG---------------- 98 (230)
T ss_dssp --------------------------------------GC-CGGGCCCEEEE----------EE----------------
T ss_pred --------------------------------------cc-ccccccCEEEE----------eC----------------
Confidence 11 11236898772 11
Q ss_pred cCChHHHHHHHHHHHHHhhccCcEEEEEeCCcCCHHHHHHHHHHcCCceEE
Q 015035 276 SGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVK 326 (414)
Q Consensus 276 ~GGe~~Fv~rii~eS~~l~~~~~w~t~mvgk~~~l~~l~~~l~~~g~~~v~ 326 (414)
. +-..+.+|+++....++++++| ..-+ ......|.+.|.++||..+.
T Consensus 99 -m-Gg~lI~~IL~~~~~~l~~~~~l-Ilqp-~~~~~~lr~~L~~~Gf~i~~ 145 (230)
T 3lec_A 99 -M-GGRLIADILNNDIDKLQHVKTL-VLQP-NNREDDLRKWLAANDFEIVA 145 (230)
T ss_dssp -E-CHHHHHHHHHHTGGGGTTCCEE-EEEE-SSCHHHHHHHHHHTTEEEEE
T ss_pred -C-chHHHHHHHHHHHHHhCcCCEE-EEEC-CCChHHHHHHHHHCCCEEEE
Confidence 1 2267889999988888888876 3333 66799999999999987544
No 21
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.48 E-value=1.7e-13 Score=129.95 Aligned_cols=123 Identities=18% Similarity=0.165 Sum_probs=98.3
Q ss_pred CeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCcccccc
Q 015035 117 VKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDES 196 (414)
Q Consensus 117 ~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~~~p~~~~~~~~~~~~~~~ 196 (414)
.+|||||||||+|++.+++..+..+|+|+|+++.+++.|++|++.|+ +.++|+++.+|..
T Consensus 17 ~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~g-l~~~i~~~~~d~l------------------- 76 (225)
T 3kr9_A 17 AILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHG-LKEKIQVRLANGL------------------- 76 (225)
T ss_dssp EEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTT-CTTTEEEEECSGG-------------------
T ss_pred CEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC-CCceEEEEECchh-------------------
Confidence 58999999999999999998788899999999999999999999996 9889999998742
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccccccccCCCccccCCCCCccccc
Q 015035 197 NMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCS 276 (414)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em~~~ 276 (414)
.++ ...++||+|+.. + -
T Consensus 77 ------------------------------------~~l-~~~~~~D~Ivia----------G----------------~ 93 (225)
T 3kr9_A 77 ------------------------------------AAF-EETDQVSVITIA----------G----------------M 93 (225)
T ss_dssp ------------------------------------GGC-CGGGCCCEEEEE----------E----------------E
T ss_pred ------------------------------------hhc-ccCcCCCEEEEc----------C----------------C
Confidence 111 112268877730 1 0
Q ss_pred CChHHHHHHHHHHHHHhhccCcEEEEEeCCcCCHHHHHHHHHHcCCceEE
Q 015035 277 GGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVK 326 (414)
Q Consensus 277 GGe~~Fv~rii~eS~~l~~~~~w~t~mvgk~~~l~~l~~~l~~~g~~~v~ 326 (414)
+-..+.+|++++...+.+++|+.. -+ ..+...+.+.|.++||..+.
T Consensus 94 --Gg~~i~~Il~~~~~~L~~~~~lVl-q~-~~~~~~vr~~L~~~Gf~i~~ 139 (225)
T 3kr9_A 94 --GGRLIARILEEGLGKLANVERLIL-QP-NNREDDLRIWLQDHGFQIVA 139 (225)
T ss_dssp --CHHHHHHHHHHTGGGCTTCCEEEE-EE-SSCHHHHHHHHHHTTEEEEE
T ss_pred --ChHHHHHHHHHHHHHhCCCCEEEE-EC-CCCHHHHHHHHHHCCCEEEE
Confidence 224589999999988888998643 33 57999999999999987544
No 22
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.48 E-value=6.8e-14 Score=131.76 Aligned_cols=48 Identities=25% Similarity=0.250 Sum_probs=43.5
Q ss_pred CCCeEEEECCcccHHHHHHHHH--hcCCeeEEecCcHHHHHHHHHHHHHC
Q 015035 115 DKVKGFDIGTGANCIYPLLGAS--LLGWSFVGSDMTDVALEWAEKNVKSN 162 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~--~~~~~vvgvDis~~Al~~A~~N~~~n 162 (414)
...+|||+|||+|.+++.++.. .++.+|+|+|+|+.+++.|++|+..+
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~ 100 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALL 100 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTT
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHh
Confidence 3468999999999999999887 67789999999999999999999876
No 23
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.47 E-value=5.3e-13 Score=136.95 Aligned_cols=91 Identities=13% Similarity=0.112 Sum_probs=73.2
Q ss_pred CcEEEecCCCeeCCCC-CcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHH
Q 015035 74 GLNWWIPDGQLCPTVP-NRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVAL 152 (414)
Q Consensus 74 gl~~~vp~gvLiPriP-~R~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al 152 (414)
|++|.++++.++|..+ .+..++.++.+.+.. ....+|||+|||+|.+++.|+.. ..+|+|+|+|+.|+
T Consensus 253 g~~~~~~~~~f~q~n~~~~e~l~~~~~~~l~~---------~~~~~VLDlgcG~G~~~~~la~~--~~~V~gvD~s~~al 321 (433)
T 1uwv_A 253 GLRLTFSPRDFIQVNAGVNQKMVARALEWLDV---------QPEDRVLDLFCGMGNFTLPLATQ--AASVVGVEGVPALV 321 (433)
T ss_dssp TEEEECCSSSCCCSBHHHHHHHHHHHHHHHTC---------CTTCEEEEESCTTTTTHHHHHTT--SSEEEEEESCHHHH
T ss_pred CEEEEECcccccccCHHHHHHHHHHHHHhhcC---------CCCCEEEECCCCCCHHHHHHHhh--CCEEEEEeCCHHHH
Confidence 9999999999999632 234455555555542 13458999999999999999875 67999999999999
Q ss_pred HHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 153 EWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 153 ~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
+.|++|++.|+ +. +++++++|..
T Consensus 322 ~~A~~n~~~~~-~~-~v~f~~~d~~ 344 (433)
T 1uwv_A 322 EKGQQNARLNG-LQ-NVTFYHENLE 344 (433)
T ss_dssp HHHHHHHHHTT-CC-SEEEEECCTT
T ss_pred HHHHHHHHHcC-CC-ceEEEECCHH
Confidence 99999999996 65 7999998853
No 24
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.47 E-value=1e-12 Score=118.39 Aligned_cols=116 Identities=12% Similarity=0.057 Sum_probs=86.6
Q ss_pred CCeEEEECCcccHHHHHHHHHh-cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCcccc
Q 015035 116 KVKGFDIGTGANCIYPLLGASL-LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~-~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~~~p~~~~~~~~~~~~~ 194 (414)
..+|||+|||+|.++..++... +..+++|+|+++.+++.|++|++.++ +.++++++++|..+
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~---------------- 85 (197)
T 3eey_A 23 GDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLN-LIDRVTLIKDGHQN---------------- 85 (197)
T ss_dssp TCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTT-CGGGEEEECSCGGG----------------
T ss_pred CCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC-CCCCeEEEECCHHH----------------
Confidence 4689999999999999998876 56799999999999999999999986 77789998887421
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccccccccCCCccccCCCCCccc
Q 015035 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMV 274 (414)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em~ 274 (414)
+... ..++||+|+|||||++..+.... .
T Consensus 86 -------------------------------------~~~~--~~~~fD~v~~~~~~~~~~~~~~~---------~---- 113 (197)
T 3eey_A 86 -------------------------------------MDKY--IDCPVKAVMFNLGYLPSGDHSIS---------T---- 113 (197)
T ss_dssp -------------------------------------GGGT--CCSCEEEEEEEESBCTTSCTTCB---------C----
T ss_pred -------------------------------------Hhhh--ccCCceEEEEcCCcccCcccccc---------c----
Confidence 0001 13689999999999764321100 0
Q ss_pred ccCChHHHHHHHHHHHHHhhccCcEEEEEe
Q 015035 275 CSGGERAFITRIIEDSVALKQTFRWYTSMV 304 (414)
Q Consensus 275 ~~GGe~~Fv~rii~eS~~l~~~~~w~t~mv 304 (414)
...-..+++++...+++++|++.+..
T Consensus 114 ----~~~~~~~~l~~~~~~Lk~gG~l~~~~ 139 (197)
T 3eey_A 114 ----RPETTIQALSKAMELLVTGGIITVVI 139 (197)
T ss_dssp ----CHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ----CcccHHHHHHHHHHhCcCCCEEEEEE
Confidence 12234457788888889999876554
No 25
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.47 E-value=7.4e-13 Score=134.18 Aligned_cols=153 Identities=14% Similarity=0.177 Sum_probs=106.4
Q ss_pred cEEEecCCCeeCCC--CCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHH
Q 015035 75 LNWWIPDGQLCPTV--PNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVAL 152 (414)
Q Consensus 75 l~~~vp~gvLiPri--P~R~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al 152 (414)
+.|...++++...- |.+..++.++.+.+... .....+|||+|||+|.+++.++.. +.+|+|+|+|+.++
T Consensus 198 ~~~~~~pgvFs~~~~d~~t~~ll~~l~~~l~~~-------~~~~~~VLDlGcG~G~~~~~la~~--g~~V~gvDis~~al 268 (381)
T 3dmg_A 198 YTFHHLPGVFSAGKVDPASLLLLEALQERLGPE-------GVRGRQVLDLGAGYGALTLPLARM--GAEVVGVEDDLASV 268 (381)
T ss_dssp EEEEECTTCTTTTSCCHHHHHHHHHHHHHHCTT-------TTTTCEEEEETCTTSTTHHHHHHT--TCEEEEEESBHHHH
T ss_pred EEEEeCCCceeCCCCCHHHHHHHHHHHHhhccc-------CCCCCEEEEEeeeCCHHHHHHHHc--CCEEEEEECCHHHH
Confidence 35667778877432 22333444444444211 113468999999999999998875 67999999999999
Q ss_pred HHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcc
Q 015035 153 EWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVL 232 (414)
Q Consensus 153 ~~A~~N~~~n~~l~~rI~~~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il 232 (414)
+.|++|++.|+ +. ++++..|..+ .
T Consensus 269 ~~A~~n~~~~~-~~--v~~~~~D~~~----------------------------------------------------~- 292 (381)
T 3dmg_A 269 LSLQKGLEANA-LK--AQALHSDVDE----------------------------------------------------A- 292 (381)
T ss_dssp HHHHHHHHHTT-CC--CEEEECSTTT----------------------------------------------------T-
T ss_pred HHHHHHHHHcC-CC--eEEEEcchhh----------------------------------------------------c-
Confidence 99999999986 54 8888887532 0
Q ss_pred ccccCCCCcEEEEEECCCcccccccccCCCccccCCCCCcccccCChHHHHHHHHHHHHHhhccCcEEEEEeCCcCCHHH
Q 015035 233 VGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKF 312 (414)
Q Consensus 233 ~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em~~~GGe~~Fv~rii~eS~~l~~~~~w~t~mvgk~~~l~~ 312 (414)
....++||+|+|||||.... .. .......+++++..+++++|++.+...+......
T Consensus 293 ---~~~~~~fD~Ii~npp~~~~~--------------~~-------~~~~~~~~l~~~~~~LkpGG~l~iv~n~~l~~~~ 348 (381)
T 3dmg_A 293 ---LTEEARFDIIVTNPPFHVGG--------------AV-------ILDVAQAFVNVAAARLRPGGVFFLVSNPFLKYEP 348 (381)
T ss_dssp ---SCTTCCEEEEEECCCCCTTC--------------SS-------CCHHHHHHHHHHHHHEEEEEEEEEEECTTSCHHH
T ss_pred ---cccCCCeEEEEECCchhhcc--------------cc-------cHHHHHHHHHHHHHhcCcCcEEEEEEcCCCChHH
Confidence 01246899999999997421 10 1245678888888999999998777766655555
Q ss_pred HHHH
Q 015035 313 LISK 316 (414)
Q Consensus 313 l~~~ 316 (414)
+.+.
T Consensus 349 ~l~~ 352 (381)
T 3dmg_A 349 LLEE 352 (381)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4433
No 26
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.46 E-value=3.1e-13 Score=119.84 Aligned_cols=88 Identities=11% Similarity=0.000 Sum_probs=59.4
Q ss_pred EEecCCCeeCCCCCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHH
Q 015035 77 WWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAE 156 (414)
Q Consensus 77 ~~vp~gvLiPriP~R~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~ 156 (414)
+..|++ .++| |.+.....++.+.+... ....+|||+|||+|.+++.++.. +..+++|+|+|+.+++.|+
T Consensus 3 l~~p~~-~~~r-p~~~~~~~~~~~~l~~~--------~~~~~vLDlGcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~ 71 (177)
T 2esr_A 3 LKTLDG-KITR-PTSDKVRGAIFNMIGPY--------FNGGRVLDLFAGSGGLAIEAVSR-GMSAAVLVEKNRKAQAIIQ 71 (177)
T ss_dssp -----------------CHHHHHHHHCSC--------CCSCEEEEETCTTCHHHHHHHHT-TCCEEEEECCCHHHHHHHH
T ss_pred ccCCCC-CCCC-cCHHHHHHHHHHHHHhh--------cCCCeEEEeCCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHH
Confidence 344544 5666 55555666666666521 13468999999999999888875 5579999999999999999
Q ss_pred HHHHHCCCCCCcEEEEEccC
Q 015035 157 KNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 157 ~N~~~n~~l~~rI~~~~~d~ 176 (414)
+|++.++ +.++++++..|.
T Consensus 72 ~~~~~~~-~~~~~~~~~~d~ 90 (177)
T 2esr_A 72 DNIIMTK-AENRFTLLKMEA 90 (177)
T ss_dssp HHHHTTT-CGGGEEEECSCH
T ss_pred HHHHHcC-CCCceEEEECcH
Confidence 9999986 777899987763
No 27
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.46 E-value=1e-12 Score=126.74 Aligned_cols=120 Identities=8% Similarity=0.062 Sum_probs=92.0
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccc
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~~~p~~~~~~~~~~~~~~ 195 (414)
..+|||+|||+|.+++.++..... +|+|+|+|+.+++.|++|++.|+ +.++++++++|..+
T Consensus 126 ~~~VLDlgcG~G~~~~~la~~~~~-~V~~vD~s~~~~~~a~~n~~~n~-~~~~v~~~~~D~~~----------------- 186 (278)
T 2frn_A 126 DELVVDMFAGIGHLSLPIAVYGKA-KVIAIEKDPYTFKFLVENIHLNK-VEDRMSAYNMDNRD----------------- 186 (278)
T ss_dssp TCEEEETTCTTTTTHHHHHHHTCC-EEEEECCCHHHHHHHHHHHHHTT-CTTTEEEECSCTTT-----------------
T ss_pred CCEEEEecccCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHHcC-CCceEEEEECCHHH-----------------
Confidence 468999999999999999886554 89999999999999999999996 88889999887532
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccccccccCCCccccCCCCCcccc
Q 015035 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (414)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em~~ 275 (414)
+. ..++||+|+||||+..
T Consensus 187 -----------------------------------~~-----~~~~fD~Vi~~~p~~~---------------------- 204 (278)
T 2frn_A 187 -----------------------------------FP-----GENIADRILMGYVVRT---------------------- 204 (278)
T ss_dssp -----------------------------------CC-----CCSCEEEEEECCCSSG----------------------
T ss_pred -----------------------------------hc-----ccCCccEEEECCchhH----------------------
Confidence 01 1468999999999642
Q ss_pred cCChHHHHHHHHHHHHHhhccCcEEEEE-eC-----CcCCHHHHHHHHHHcCCce
Q 015035 276 SGGERAFITRIIEDSVALKQTFRWYTSM-VG-----RKSNLKFLISKLRKVGVTI 324 (414)
Q Consensus 276 ~GGe~~Fv~rii~eS~~l~~~~~w~t~m-vg-----k~~~l~~l~~~l~~~g~~~ 324 (414)
..+++++..+++++|++.+. .+ .....+.+.+.+++.|+..
T Consensus 205 --------~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~ 251 (278)
T 2frn_A 205 --------HEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDV 251 (278)
T ss_dssp --------GGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEE
T ss_pred --------HHHHHHHHHHCCCCeEEEEEEeeccccccccHHHHHHHHHHHcCCee
Confidence 12234455577788776442 22 1456788999999999863
No 28
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.44 E-value=3.1e-12 Score=116.18 Aligned_cols=123 Identities=18% Similarity=0.121 Sum_probs=96.7
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccc
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~~~p~~~~~~~~~~~~~~ 195 (414)
..+|||||||+|.++..++. .+..+++|+|+++.+++.|++|+..++ +.+ +++++.|..+
T Consensus 61 ~~~vLDiG~G~G~~~~~l~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~-v~~~~~d~~~----------------- 120 (205)
T 3grz_A 61 PLTVADVGTGSGILAIAAHK-LGAKSVLATDISDESMTAAEENAALNG-IYD-IALQKTSLLA----------------- 120 (205)
T ss_dssp CCEEEEETCTTSHHHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHTT-CCC-CEEEESSTTT-----------------
T ss_pred CCEEEEECCCCCHHHHHHHH-CCCCEEEEEECCHHHHHHHHHHHHHcC-CCc-eEEEeccccc-----------------
Confidence 46899999999999988775 455699999999999999999999986 655 8888887431
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccccccccCCCccccCCCCCcccc
Q 015035 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (414)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em~~ 275 (414)
. ..++||+|+||+|+.
T Consensus 121 -----------------------------------~------~~~~fD~i~~~~~~~----------------------- 136 (205)
T 3grz_A 121 -----------------------------------D------VDGKFDLIVANILAE----------------------- 136 (205)
T ss_dssp -----------------------------------T------CCSCEEEEEEESCHH-----------------------
T ss_pred -----------------------------------c------CCCCceEEEECCcHH-----------------------
Confidence 0 136899999999762
Q ss_pred cCChHHHHHHHHHHHHHhhccCcEEEEE-eCCcCCHHHHHHHHHHcCCceEEEEE
Q 015035 276 SGGERAFITRIIEDSVALKQTFRWYTSM-VGRKSNLKFLISKLRKVGVTIVKTTE 329 (414)
Q Consensus 276 ~GGe~~Fv~rii~eS~~l~~~~~w~t~m-vgk~~~l~~l~~~l~~~g~~~v~~~e 329 (414)
.+.+++++...+++++|++.+. +. ..+...+.+.+++.|+..+.+.+
T Consensus 137 ------~~~~~l~~~~~~L~~gG~l~~~~~~-~~~~~~~~~~~~~~Gf~~~~~~~ 184 (205)
T 3grz_A 137 ------ILLDLIPQLDSHLNEDGQVIFSGID-YLQLPKIEQALAENSFQIDLKMR 184 (205)
T ss_dssp ------HHHHHGGGSGGGEEEEEEEEEEEEE-GGGHHHHHHHHHHTTEEEEEEEE
T ss_pred ------HHHHHHHHHHHhcCCCCEEEEEecC-cccHHHHHHHHHHcCCceEEeec
Confidence 1345666777778888876553 44 67899999999999998776654
No 29
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.44 E-value=5.7e-13 Score=120.79 Aligned_cols=142 Identities=13% Similarity=0.046 Sum_probs=103.5
Q ss_pred CCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCc
Q 015035 89 PNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISEL 168 (414)
Q Consensus 89 P~R~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~r 168 (414)
|.+..++.++.+.+..... ....+|||+|||+|.++..++...++.+++|+|+|+.+++.|++|++.++ +.+
T Consensus 45 ~~~~~~~~~~~~~l~~~~~------~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~- 116 (207)
T 1jsx_A 45 DPNEMLVRHILDSIVVAPY------LQGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELK-LEN- 116 (207)
T ss_dssp ---CHHHHHHHHHHHHGGG------CCSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTT-CSS-
T ss_pred CHHHHHHHHHHhhhhhhhh------cCCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcC-CCC-
Confidence 4455566666665543100 02368999999999999999988888999999999999999999999985 654
Q ss_pred EEEEEccCCCCCCcccccccCCccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEEC
Q 015035 169 IEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248 (414)
Q Consensus 169 I~~~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcN 248 (414)
+++++.|..+ + ...++||+|+||
T Consensus 117 v~~~~~d~~~----------------------------------------------------~-----~~~~~~D~i~~~ 139 (207)
T 1jsx_A 117 IEPVQSRVEE----------------------------------------------------F-----PSEPPFDGVISR 139 (207)
T ss_dssp EEEEECCTTT----------------------------------------------------S-----CCCSCEEEEECS
T ss_pred eEEEecchhh----------------------------------------------------C-----CccCCcCEEEEe
Confidence 9998887531 0 013579999997
Q ss_pred CCcccccccccCCCccccCCCCCcccccCChHHHHHHHHHHHHHhhccCcEEEEEeCCcCCHHHHHHHHHHcCCceEEEE
Q 015035 249 PPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTT 328 (414)
Q Consensus 249 PPy~~s~ee~~~~P~~a~~g~~~Em~~~GGe~~Fv~rii~eS~~l~~~~~w~t~mvgk~~~l~~l~~~l~~~g~~~v~~~ 328 (414)
. + . .+..+++....+++++|++.++.| ..+.+.+.+.++ |+..+++.
T Consensus 140 ~-~------------------~-----------~~~~~l~~~~~~L~~gG~l~~~~~-~~~~~~~~~~~~--g~~~~~~~ 186 (207)
T 1jsx_A 140 A-F------------------A-----------SLNDMVSWCHHLPGEQGRFYALKG-QMPEDEIALLPE--EYQVESVV 186 (207)
T ss_dssp C-S------------------S-----------SHHHHHHHHTTSEEEEEEEEEEES-SCCHHHHHTSCT--TEEEEEEE
T ss_pred c-c------------------C-----------CHHHHHHHHHHhcCCCcEEEEEeC-CCchHHHHHHhc--CCceeeee
Confidence 3 0 0 144677777788999999999988 567777777665 77766643
No 30
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.44 E-value=1.5e-12 Score=116.21 Aligned_cols=145 Identities=15% Similarity=0.087 Sum_probs=92.0
Q ss_pred HHHHHHHHHccCCCCCCCCCCCCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEE
Q 015035 94 YIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRK 173 (414)
Q Consensus 94 yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~ 173 (414)
.+.++..++... + ....+|||+|||+|.++..|+.. +.+|+|+|+|+.+++.|++|++.++ + +++++++
T Consensus 8 ~~~~~~~~l~~~-~------~~~~~vLDiGcG~G~~~~~la~~--~~~v~~vD~s~~~l~~a~~~~~~~~-~-~~v~~~~ 76 (185)
T 3mti_A 8 PIHMSHDFLAEV-L------DDESIVVDATMGNGNDTAFLAGL--SKKVYAFDVQEQALGKTSQRLSDLG-I-ENTELIL 76 (185)
T ss_dssp HHHHHHHHHHTT-C------CTTCEEEESCCTTSHHHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHHT-C-CCEEEEE
T ss_pred HHHHHHHHHHHh-C------CCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcC-C-CcEEEEe
Confidence 344555555542 1 13468999999999999999876 7899999999999999999999885 6 6799988
Q ss_pred ccCCCCCCcccccccCCccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCccc
Q 015035 174 VDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFE 253 (414)
Q Consensus 174 ~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~~ 253 (414)
.+... +... .+++||+|++|+||++
T Consensus 77 ~~~~~-----------------------------------------------------l~~~--~~~~fD~v~~~~~~~~ 101 (185)
T 3mti_A 77 DGHEN-----------------------------------------------------LDHY--VREPIRAAIFNLGYLP 101 (185)
T ss_dssp SCGGG-----------------------------------------------------GGGT--CCSCEEEEEEEEC---
T ss_pred CcHHH-----------------------------------------------------HHhh--ccCCcCEEEEeCCCCC
Confidence 44210 1111 1468999999999986
Q ss_pred ccccccCCCccccCCCCCcccccCChHHHHHHHHHHHHHhhccCcEEEEEeCC-----cCCHHHHHHHHHHcC
Q 015035 254 SMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGR-----KSNLKFLISKLRKVG 321 (414)
Q Consensus 254 s~ee~~~~P~~a~~g~~~Em~~~GGe~~Fv~rii~eS~~l~~~~~w~t~mvgk-----~~~l~~l~~~l~~~g 321 (414)
..+..- .. ...-..+++++...+++++|++...+-. ......+.+.+....
T Consensus 102 ~~~~~~--------------~~---~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l~ 157 (185)
T 3mti_A 102 SADKSV--------------IT---KPHTTLEAIEKILDRLEVGGRLAIMIYYGHDGGDMEKDAVLEYVIGLD 157 (185)
T ss_dssp -------------------------CHHHHHHHHHHHHHHEEEEEEEEEEEC------CHHHHHHHHHHHHSC
T ss_pred Ccchhc--------------cc---ChhhHHHHHHHHHHhcCCCcEEEEEEeCCCCCCHHHHHHHHHHHHhCC
Confidence 432110 00 1122345667777888899887655431 112345555555543
No 31
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.44 E-value=3.3e-12 Score=116.05 Aligned_cols=128 Identities=14% Similarity=0.052 Sum_probs=102.0
Q ss_pred CCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCcccc
Q 015035 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~~~p~~~~~~~~~~~~~ 194 (414)
...+|||||||+|.++..++...+..+++|+|+|+.+++.|++|++.++ + +++++++.|..+
T Consensus 40 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~-~~v~~~~~d~~~---------------- 101 (204)
T 3e05_A 40 DDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFV-A-RNVTLVEAFAPE---------------- 101 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHT-C-TTEEEEECCTTT----------------
T ss_pred CCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhC-C-CcEEEEeCChhh----------------
Confidence 3468999999999999999998888999999999999999999999886 6 679999887531
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccccccccCCCccccCCCCCccc
Q 015035 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMV 274 (414)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em~ 274 (414)
.+ ...++||+|++++++.
T Consensus 102 ------------------------------------~~----~~~~~~D~i~~~~~~~---------------------- 119 (204)
T 3e05_A 102 ------------------------------------GL----DDLPDPDRVFIGGSGG---------------------- 119 (204)
T ss_dssp ------------------------------------TC----TTSCCCSEEEESCCTT----------------------
T ss_pred ------------------------------------hh----hcCCCCCEEEECCCCc----------------------
Confidence 01 1125699999998762
Q ss_pred ccCChHHHHHHHHHHHHHhhccCcEEEEEeCCcCCHHHHHHHHHHcCCceEEEEEe
Q 015035 275 CSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEF 330 (414)
Q Consensus 275 ~~GGe~~Fv~rii~eS~~l~~~~~w~t~mvgk~~~l~~l~~~l~~~g~~~v~~~e~ 330 (414)
.+..++++...+++++|++.+......+...+.+.+++.|+ .+++.+.
T Consensus 120 -------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~l~~~g~-~~~~~~~ 167 (204)
T 3e05_A 120 -------MLEEIIDAVDRRLKSEGVIVLNAVTLDTLTKAVEFLEDHGY-MVEVACV 167 (204)
T ss_dssp -------CHHHHHHHHHHHCCTTCEEEEEECBHHHHHHHHHHHHHTTC-EEEEEEE
T ss_pred -------CHHHHHHHHHHhcCCCeEEEEEecccccHHHHHHHHHHCCC-ceeEEEE
Confidence 13356777778888999887766656788999999999998 5655543
No 32
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.43 E-value=1.6e-12 Score=131.59 Aligned_cols=133 Identities=8% Similarity=0.062 Sum_probs=93.4
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCC-cEEEEEccCCCCCCcccccccCCcccc
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISE-LIEIRKVDNSESTPSIQESLTGKSVQD 194 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~-rI~~~~~d~~~~~p~~~~~~~~~~~~~ 194 (414)
..+|||+|||+|.+++.+|... ..+|+|+|+|+.|++.|++|++.|+ +.+ +++++++|..+
T Consensus 213 ~~~VLDl~cGtG~~sl~la~~g-a~~V~~vD~s~~al~~A~~N~~~n~-~~~~~v~~~~~D~~~---------------- 274 (385)
T 2b78_A 213 GKTVLNLFSYTAAFSVAAAMGG-AMATTSVDLAKRSRALSLAHFEANH-LDMANHQLVVMDVFD---------------- 274 (385)
T ss_dssp TCEEEEETCTTTHHHHHHHHTT-BSEEEEEESCTTHHHHHHHHHHHTT-CCCTTEEEEESCHHH----------------
T ss_pred CCeEEEEeeccCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcC-CCccceEEEECCHHH----------------
Confidence 3589999999999999988642 2389999999999999999999996 766 89999887421
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccccccccCCCccccCCCCCccc
Q 015035 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMV 274 (414)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em~ 274 (414)
++.......++||+|++||||+..... ...+
T Consensus 275 ------------------------------------~l~~~~~~~~~fD~Ii~DPP~~~~~~~----------~~~~--- 305 (385)
T 2b78_A 275 ------------------------------------YFKYARRHHLTYDIIIIDPPSFARNKK----------EVFS--- 305 (385)
T ss_dssp ------------------------------------HHHHHHHTTCCEEEEEECCCCC---------------CCCC---
T ss_pred ------------------------------------HHHHHHHhCCCccEEEECCCCCCCChh----------hHHH---
Confidence 111111124589999999999853211 0111
Q ss_pred ccCChHHHHHHHHHHHHHhhccCcEEEEEeCCcC-CHHHHHHHHHH
Q 015035 275 CSGGERAFITRIIEDSVALKQTFRWYTSMVGRKS-NLKFLISKLRK 319 (414)
Q Consensus 275 ~~GGe~~Fv~rii~eS~~l~~~~~w~t~mvgk~~-~l~~l~~~l~~ 319 (414)
.+..+.+++..+..+++++|++.+...... ....+.+.+++
T Consensus 306 ----~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~i~~ 347 (385)
T 2b78_A 306 ----VSKDYHKLIRQGLEILSENGLIIASTNAANMTVSQFKKQIEK 347 (385)
T ss_dssp ----HHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHHH
Confidence 456788899999999999988766555333 23444444443
No 33
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.42 E-value=8.2e-13 Score=121.14 Aligned_cols=93 Identities=11% Similarity=-0.015 Sum_probs=67.0
Q ss_pred hcCCcEEEecCCCeeCCCCCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHH
Q 015035 71 HDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDV 150 (414)
Q Consensus 71 ~~fgl~~~vp~gvLiPriP~R~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~ 150 (414)
.+.|..+.+|++ ..+| |....+...+.+++... ....+|||+|||+|.+++.++.+. ..+|+|+|+|+.
T Consensus 20 ~~~g~~l~~~~~-~~~r-p~~~~~~~~l~~~l~~~--------~~~~~vLDlgcG~G~~~~~l~~~~-~~~V~~vD~s~~ 88 (202)
T 2fpo_A 20 QWRGRKLPVPDS-PGLR-PTTDRVRETLFNWLAPV--------IVDAQCLDCFAGSGALGLEALSRY-AAGATLIEMDRA 88 (202)
T ss_dssp GGTTCEEECCCC--------CHHHHHHHHHHHHHH--------HTTCEEEETTCTTCHHHHHHHHTT-CSEEEEECSCHH
T ss_pred EEcCcEecCCCC-CCCC-CCHHHHHHHHHHHHHhh--------cCCCeEEEeCCCcCHHHHHHHhcC-CCEEEEEECCHH
Confidence 477889999886 3445 44555555555555421 023689999999999998766643 248999999999
Q ss_pred HHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 151 ALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 151 Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
+++.|++|++.++ + +++++++.|.
T Consensus 89 ~l~~a~~~~~~~~-~-~~v~~~~~D~ 112 (202)
T 2fpo_A 89 VSQQLIKNLATLK-A-GNARVVNSNA 112 (202)
T ss_dssp HHHHHHHHHHHTT-C-CSEEEECSCH
T ss_pred HHHHHHHHHHHcC-C-CcEEEEECCH
Confidence 9999999999996 6 6799988763
No 34
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.42 E-value=4.6e-12 Score=111.90 Aligned_cols=145 Identities=15% Similarity=0.099 Sum_probs=107.2
Q ss_pred eCCCCCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCC
Q 015035 85 CPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPH 164 (414)
Q Consensus 85 iPriP~R~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~ 164 (414)
+|+ +.+.....++.+.+.. ....+|||+|||+|.++..++... .+++|+|+|+.+++.|++|++.++
T Consensus 13 ~~~-~~~~~~~~~~~~~~~~---------~~~~~vldiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~~~~- 79 (192)
T 1l3i_A 13 VPG-PTAMEVRCLIMCLAEP---------GKNDVAVDVGCGTGGVTLELAGRV--RRVYAIDRNPEAISTTEMNLQRHG- 79 (192)
T ss_dssp SCC-CCCHHHHHHHHHHHCC---------CTTCEEEEESCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHTT-
T ss_pred CCC-CChHHHHHHHHHhcCC---------CCCCEEEEECCCCCHHHHHHHHhc--CEEEEEECCHHHHHHHHHHHHHcC-
Confidence 344 4455555666655542 234699999999999999888765 799999999999999999999985
Q ss_pred CCCcEEEEEccCCCCCCcccccccCCccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEE
Q 015035 165 ISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDF 244 (414)
Q Consensus 165 l~~rI~~~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~ 244 (414)
+..++.+++.|.. .. ....++||+
T Consensus 80 ~~~~~~~~~~d~~-------------------------------------------------------~~-~~~~~~~D~ 103 (192)
T 1l3i_A 80 LGDNVTLMEGDAP-------------------------------------------------------EA-LCKIPDIDI 103 (192)
T ss_dssp CCTTEEEEESCHH-------------------------------------------------------HH-HTTSCCEEE
T ss_pred CCcceEEEecCHH-------------------------------------------------------Hh-cccCCCCCE
Confidence 7678998887631 00 011247999
Q ss_pred EEECCCcccccccccCCCccccCCCCCcccccCChHHHHHHHHHHHHHhhccCcEEEEEeCCcCCHHHHHHHHHHcCCce
Q 015035 245 CICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTI 324 (414)
Q Consensus 245 imcNPPy~~s~ee~~~~P~~a~~g~~~Em~~~GGe~~Fv~rii~eS~~l~~~~~w~t~mvgk~~~l~~l~~~l~~~g~~~ 324 (414)
|+|++|+. + +..++++...+++++|++............+.+.+++.|+ .
T Consensus 104 v~~~~~~~------------------~-----------~~~~l~~~~~~l~~gG~l~~~~~~~~~~~~~~~~l~~~g~-~ 153 (192)
T 1l3i_A 104 AVVGGSGG------------------E-----------LQEILRIIKDKLKPGGRIIVTAILLETKFEAMECLRDLGF-D 153 (192)
T ss_dssp EEESCCTT------------------C-----------HHHHHHHHHHTEEEEEEEEEEECBHHHHHHHHHHHHHTTC-C
T ss_pred EEECCchH------------------H-----------HHHHHHHHHHhcCCCcEEEEEecCcchHHHHHHHHHHCCC-c
Confidence 99998751 0 2456677778888899887776667788899999999998 4
Q ss_pred EEEE
Q 015035 325 VKTT 328 (414)
Q Consensus 325 v~~~ 328 (414)
+++.
T Consensus 154 ~~~~ 157 (192)
T 1l3i_A 154 VNIT 157 (192)
T ss_dssp CEEE
T ss_pred eEEE
Confidence 4444
No 35
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.41 E-value=1.3e-12 Score=124.58 Aligned_cols=146 Identities=14% Similarity=0.081 Sum_probs=107.6
Q ss_pred CCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCcccc
Q 015035 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~~~p~~~~~~~~~~~~~ 194 (414)
...+|||||||+|++++.|+...++++|+|+|+|+.+++.|++|++.++ +.+ |+++++|..+
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-l~~-v~~~~~d~~~---------------- 141 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLG-LKG-ARALWGRAEV---------------- 141 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHT-CSS-EEEEECCHHH----------------
T ss_pred CCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhC-CCc-eEEEECcHHH----------------
Confidence 3468999999999999999998899999999999999999999999986 754 9999887421
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccccccccCCCccccCCCCCccc
Q 015035 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMV 274 (414)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em~ 274 (414)
+.......++||+|+|+= + .
T Consensus 142 -------------------------------------~~~~~~~~~~fD~I~s~a----------------~---~---- 161 (249)
T 3g89_A 142 -------------------------------------LAREAGHREAYARAVARA----------------V---A---- 161 (249)
T ss_dssp -------------------------------------HTTSTTTTTCEEEEEEES----------------S---C----
T ss_pred -------------------------------------hhcccccCCCceEEEECC----------------c---C----
Confidence 000000136899999941 0 0
Q ss_pred ccCChHHHHHHHHHHHHHhhccCcEEEEEeCCc--CCHHHHHHHHHHcCCceEEEEEec-CC-CeeEEEEEEEec
Q 015035 275 CSGGERAFITRIIEDSVALKQTFRWYTSMVGRK--SNLKFLISKLRKVGVTIVKTTEFV-QG-QTCRWGLAWSFV 345 (414)
Q Consensus 275 ~~GGe~~Fv~rii~eS~~l~~~~~w~t~mvgk~--~~l~~l~~~l~~~g~~~v~~~e~~-qG-~t~Rw~lAWsf~ 345 (414)
. +..+++.+..+++++|.+..+.|.. ..+..+...+++.|+...++..+. .+ ...|.++.+...
T Consensus 162 ----~---~~~ll~~~~~~LkpgG~l~~~~g~~~~~e~~~~~~~l~~~G~~~~~~~~~~~p~~~~~R~l~~~~k~ 229 (249)
T 3g89_A 162 ----P---LCVLSELLLPFLEVGGAAVAMKGPRVEEELAPLPPALERLGGRLGEVLALQLPLSGEARHLVVLEKT 229 (249)
T ss_dssp ----C---HHHHHHHHGGGEEEEEEEEEEECSCCHHHHTTHHHHHHHHTEEEEEEEEEECTTTCCEEEEEEEEEC
T ss_pred ----C---HHHHHHHHHHHcCCCeEEEEEeCCCcHHHHHHHHHHHHHcCCeEEEEEEeeCCCCCCcEEEEEEEeC
Confidence 1 3467778888999999988888843 345567778888998877766552 23 246777766654
No 36
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.41 E-value=8.5e-13 Score=120.96 Aligned_cols=94 Identities=11% Similarity=-0.022 Sum_probs=64.3
Q ss_pred hcCCcEEEecCCCeeCCCCCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHH
Q 015035 71 HDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDV 150 (414)
Q Consensus 71 ~~fgl~~~vp~gvLiPriP~R~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~ 150 (414)
.+.|..+.+|++. .+| |....+...+.+.+... ....+|||+|||+|.+++.++.+. ..+|+|+|+|+.
T Consensus 19 ~~~g~~l~~~~~~-~~r-p~~~~~~~~l~~~l~~~--------~~~~~vLDlGcGtG~~~~~~~~~~-~~~v~gvD~s~~ 87 (201)
T 2ift_A 19 LWRGRKLPVLNSE-GLR-PTGDRVKETLFNWLMPY--------IHQSECLDGFAGSGSLGFEALSRQ-AKKVTFLELDKT 87 (201)
T ss_dssp TTTTCEEECC-----------CHHHHHHHHHHHHH--------HTTCEEEETTCTTCHHHHHHHHTT-CSEEEEECSCHH
T ss_pred eeCCcEecCCCCC-CcC-cCHHHHHHHHHHHHHHh--------cCCCeEEEcCCccCHHHHHHHHcc-CCEEEEEECCHH
Confidence 4678888888863 334 33344444555554321 023589999999999998766543 358999999999
Q ss_pred HHHHHHHHHHHCCCCC-CcEEEEEccC
Q 015035 151 ALEWAEKNVKSNPHIS-ELIEIRKVDN 176 (414)
Q Consensus 151 Al~~A~~N~~~n~~l~-~rI~~~~~d~ 176 (414)
+++.|++|++.++ +. ++++++++|.
T Consensus 88 ~l~~a~~~~~~~~-~~~~~v~~~~~d~ 113 (201)
T 2ift_A 88 VANQLKKNLQTLK-CSSEQAEVINQSS 113 (201)
T ss_dssp HHHHHHHHHHHTT-CCTTTEEEECSCH
T ss_pred HHHHHHHHHHHhC-CCccceEEEECCH
Confidence 9999999999986 64 6799988763
No 37
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.41 E-value=3.4e-12 Score=126.72 Aligned_cols=134 Identities=18% Similarity=0.115 Sum_probs=98.6
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccc
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~~~p~~~~~~~~~~~~~~ 195 (414)
+.+|||+|||+|.+++. +. ...+|+|+|+|+.|++.|++|++.|+ +.++++++++|..+
T Consensus 196 ~~~VLDlg~G~G~~~l~-a~--~~~~V~~vD~s~~ai~~a~~n~~~n~-l~~~v~~~~~D~~~----------------- 254 (336)
T 2yx1_A 196 NDVVVDMFAGVGPFSIA-CK--NAKKIYAIDINPHAIELLKKNIKLNK-LEHKIIPILSDVRE----------------- 254 (336)
T ss_dssp TCEEEETTCTTSHHHHH-TT--TSSEEEEEESCHHHHHHHHHHHHHTT-CTTTEEEEESCGGG-----------------
T ss_pred CCEEEEccCccCHHHHh-cc--CCCEEEEEECCHHHHHHHHHHHHHcC-CCCcEEEEECChHH-----------------
Confidence 46899999999999988 65 46799999999999999999999996 87789999887421
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccccccccCCCccccCCCCCcccc
Q 015035 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (414)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em~~ 275 (414)
++ ++||+|++|||++..
T Consensus 255 -----------------------------------~~-------~~fD~Vi~dpP~~~~--------------------- 271 (336)
T 2yx1_A 255 -----------------------------------VD-------VKGNRVIMNLPKFAH--------------------- 271 (336)
T ss_dssp -----------------------------------CC-------CCEEEEEECCTTTGG---------------------
T ss_pred -----------------------------------hc-------CCCcEEEECCcHhHH---------------------
Confidence 11 579999999998631
Q ss_pred cCChHHHHHHHHHHHHHhhccCcEEEE-EeCCcCCHHHHHHHHHHc-CCc--eEEEEEecCCCeeEEEEEEEecc
Q 015035 276 SGGERAFITRIIEDSVALKQTFRWYTS-MVGRKSNLKFLISKLRKV-GVT--IVKTTEFVQGQTCRWGLAWSFVP 346 (414)
Q Consensus 276 ~GGe~~Fv~rii~eS~~l~~~~~w~t~-mvgk~~~l~~l~~~l~~~-g~~--~v~~~e~~qG~t~Rw~lAWsf~~ 346 (414)
.+++.+..+++++|++.+ ..... ...+.+.+++. ++. .++..+++..++ |.+.|.|..
T Consensus 272 ---------~~l~~~~~~L~~gG~l~~~~~~~~--~~~~~~~l~~~~~~~i~~~~~v~~~~p~~--~~~~~~~~l 333 (336)
T 2yx1_A 272 ---------KFIDKALDIVEEGGVIHYYTIGKD--FDKAIKLFEKKCDCEVLEKRIVKSYAPRE--YILALDFKI 333 (336)
T ss_dssp ---------GGHHHHHHHEEEEEEEEEEEEESS--SHHHHHHHHHHSEEEEEEEEEEEEEETTE--EEEEEEEEE
T ss_pred ---------HHHHHHHHHcCCCCEEEEEEeecC--chHHHHHHHHhcCCcEEEEEEEeccCCCC--CEEEEEEEE
Confidence 334555667777776543 44423 66777778776 554 345566666663 446677654
No 38
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.41 E-value=5.9e-12 Score=110.62 Aligned_cols=149 Identities=17% Similarity=0.115 Sum_probs=104.0
Q ss_pred EEecCCCeeCC---CCCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHH
Q 015035 77 WWIPDGQLCPT---VPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALE 153 (414)
Q Consensus 77 ~~vp~gvLiPr---iP~R~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~ 153 (414)
|.+++..+... .+.......++.+.+.. ....+|||+|||+|.++..++. ++.+++|+|+++.+++
T Consensus 3 ~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~vLdiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~ 71 (183)
T 2yxd_A 3 YMIPDEEFIRREGVPITKEEIRAVSIGKLNL---------NKDDVVVDVGCGSGGMTVEIAK--RCKFVYAIDYLDGAIE 71 (183)
T ss_dssp -CCCSTTSCCBTTBCCCCHHHHHHHHHHHCC---------CTTCEEEEESCCCSHHHHHHHT--TSSEEEEEECSHHHHH
T ss_pred ccCCchheeeccCCCcCHHHHHHHHHHHcCC---------CCCCEEEEeCCCCCHHHHHHHh--cCCeEEEEeCCHHHHH
Confidence 44555544321 13445556666666642 1346899999999999998887 7789999999999999
Q ss_pred HHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccc
Q 015035 154 WAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLV 233 (414)
Q Consensus 154 ~A~~N~~~n~~l~~rI~~~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~ 233 (414)
.|++|++.++ + +++++++.|.. .
T Consensus 72 ~a~~~~~~~~-~-~~~~~~~~d~~-------------------------------------------------------~ 94 (183)
T 2yxd_A 72 VTKQNLAKFN-I-KNCQIIKGRAE-------------------------------------------------------D 94 (183)
T ss_dssp HHHHHHHHTT-C-CSEEEEESCHH-------------------------------------------------------H
T ss_pred HHHHHHHHcC-C-CcEEEEECCcc-------------------------------------------------------c
Confidence 9999999986 6 56898887632 1
Q ss_pred cccCCCCcEEEEEECCCcccccccccCCCccccCCCCCcccccCChHHHHHHHHHHHHHhhccCcEEEEEeCCcCCHHHH
Q 015035 234 GVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFL 313 (414)
Q Consensus 234 ~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em~~~GGe~~Fv~rii~eS~~l~~~~~w~t~mvgk~~~l~~l 313 (414)
.+ ..++||+|+||+| . + ...++++...+ ++|++.+......++..+
T Consensus 95 ~~--~~~~~D~i~~~~~--~-----------------~-----------~~~~l~~~~~~--~gG~l~~~~~~~~~~~~~ 140 (183)
T 2yxd_A 95 VL--DKLEFNKAFIGGT--K-----------------N-----------IEKIIEILDKK--KINHIVANTIVLENAAKI 140 (183)
T ss_dssp HG--GGCCCSEEEECSC--S-----------------C-----------HHHHHHHHHHT--TCCEEEEEESCHHHHHHH
T ss_pred cc--cCCCCcEEEECCc--c-----------------c-----------HHHHHHHHhhC--CCCEEEEEecccccHHHH
Confidence 11 1257999999998 0 0 22344444445 677766666557889999
Q ss_pred HHHHHHcCCceEEEE
Q 015035 314 ISKLRKVGVTIVKTT 328 (414)
Q Consensus 314 ~~~l~~~g~~~v~~~ 328 (414)
.+.|++.|+. ++..
T Consensus 141 ~~~l~~~g~~-~~~~ 154 (183)
T 2yxd_A 141 INEFESRGYN-VDAV 154 (183)
T ss_dssp HHHHHHTTCE-EEEE
T ss_pred HHHHHHcCCe-EEEE
Confidence 9999999964 4443
No 39
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.40 E-value=2.9e-12 Score=116.27 Aligned_cols=120 Identities=16% Similarity=0.152 Sum_probs=88.0
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccc
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~~~p~~~~~~~~~~~~~~ 195 (414)
..+|||+|||+|.++..++.. ...+++|+|+|+.+++.|++|++.++ + +++++++|..+
T Consensus 50 ~~~vlD~g~G~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~-~--~~~~~~~d~~~----------------- 108 (207)
T 1wy7_A 50 GKVVADLGAGTGVLSYGALLL-GAKEVICVEVDKEAVDVLIENLGEFK-G--KFKVFIGDVSE----------------- 108 (207)
T ss_dssp TCEEEEETCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHTGGGT-T--SEEEEESCGGG-----------------
T ss_pred cCEEEEeeCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHcC-C--CEEEEECchHH-----------------
Confidence 468999999999999988875 23479999999999999999999885 5 68888876421
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccccccccCCCccccCCCCCcccc
Q 015035 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (414)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em~~ 275 (414)
+ .++||+|+|||||..... +.
T Consensus 109 ---------------------------------------~---~~~~D~v~~~~p~~~~~~------------~~----- 129 (207)
T 1wy7_A 109 ---------------------------------------F---NSRVDIVIMNPPFGSQRK------------HA----- 129 (207)
T ss_dssp ---------------------------------------C---CCCCSEEEECCCCSSSST------------TT-----
T ss_pred ---------------------------------------c---CCCCCEEEEcCCCccccC------------Cc-----
Confidence 0 137999999999975321 01
Q ss_pred cCChHHHHHHHHHHHHHhhccCcEEEEEeCCcCCHHHHHHHHHHcCCce
Q 015035 276 SGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTI 324 (414)
Q Consensus 276 ~GGe~~Fv~rii~eS~~l~~~~~w~t~mvgk~~~l~~l~~~l~~~g~~~ 324 (414)
...++ +.+..++ ++.|.+-+........+.+.+.+.|+..
T Consensus 130 ---~~~~l----~~~~~~l--~~~~~~~~~~~~~~~~~~~~l~~~g~~~ 169 (207)
T 1wy7_A 130 ---DRPFL----LKAFEIS--DVVYSIHLAKPEVRRFIEKFSWEHGFVV 169 (207)
T ss_dssp ---THHHH----HHHHHHC--SEEEEEEECCHHHHHHHHHHHHHTTEEE
T ss_pred ---hHHHH----HHHHHhc--CcEEEEEeCCcCCHHHHHHHHHHCCCeE
Confidence 23343 4444444 6666555555677888888999999753
No 40
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.40 E-value=2.2e-12 Score=116.60 Aligned_cols=58 Identities=24% Similarity=0.281 Sum_probs=53.0
Q ss_pred CeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 117 VKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 117 ~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
.+|||||||+|.++..++.. ++.+++|+|+++.+++.|+++++.++ +.+++++++.|.
T Consensus 45 ~~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~-~~~~~~~~~~d~ 102 (219)
T 3dlc_A 45 GTCIDIGSGPGALSIALAKQ-SDFSIRALDFSKHMNEIALKNIADAN-LNDRIQIVQGDV 102 (219)
T ss_dssp EEEEEETCTTSHHHHHHHHH-SEEEEEEEESCHHHHHHHHHHHHHTT-CTTTEEEEECBT
T ss_pred CEEEEECCCCCHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHhcc-ccCceEEEEcCH
Confidence 39999999999999999886 77899999999999999999999986 777899999875
No 41
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.39 E-value=2.7e-12 Score=118.80 Aligned_cols=140 Identities=10% Similarity=0.138 Sum_probs=102.5
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccc
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~~~p~~~~~~~~~~~~~~ 195 (414)
..+|||||||+|.+++.||...|+++++|+|+|+.+++.|++|++.++ + .+|.++++|..+
T Consensus 39 ~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~-~-~nv~~~~~d~~~----------------- 99 (213)
T 2fca_A 39 NPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSE-A-QNVKLLNIDADT----------------- 99 (213)
T ss_dssp CCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSC-C-SSEEEECCCGGG-----------------
T ss_pred CceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcC-C-CCEEEEeCCHHH-----------------
Confidence 468999999999999999998899999999999999999999999985 6 469998876421
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCC--cccccccccCCCccccCCCCCcc
Q 015035 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP--FFESMEEAGLNPKTSCGGTPEEM 273 (414)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPP--y~~s~ee~~~~P~~a~~g~~~Em 273 (414)
+...+ +.+.||.|++|.| +.....+ ..
T Consensus 100 ------------------------------------l~~~~-~~~~~d~v~~~~~~p~~~~~~~------------~~-- 128 (213)
T 2fca_A 100 ------------------------------------LTDVF-EPGEVKRVYLNFSDPWPKKRHE------------KR-- 128 (213)
T ss_dssp ------------------------------------HHHHC-CTTSCCEEEEESCCCCCSGGGG------------GG--
T ss_pred ------------------------------------HHhhc-CcCCcCEEEEECCCCCcCcccc------------cc--
Confidence 11111 2457999998854 3221100 00
Q ss_pred cccCChHHHHHHHHHHHHHhhccCcEEEEEeCCcCCHHHHHHHHHHcCCceEEEEEec
Q 015035 274 VCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFV 331 (414)
Q Consensus 274 ~~~GGe~~Fv~rii~eS~~l~~~~~w~t~mvgk~~~l~~l~~~l~~~g~~~v~~~e~~ 331 (414)
..+...++++...+++++|++.+..........+.+.+.+.|+..+.+..++
T Consensus 129 ------rl~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~g~~~~~~~~d~ 180 (213)
T 2fca_A 129 ------RLTYSHFLKKYEEVMGKGGSIHFKTDNRGLFEYSLKSFSEYGLLLTYVSLDL 180 (213)
T ss_dssp ------STTSHHHHHHHHHHHTTSCEEEEEESCHHHHHHHHHHHHHHTCEEEEEESSG
T ss_pred ------ccCcHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCccccccccc
Confidence 0123566777788889999887776655667788899999998776666554
No 42
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.38 E-value=4.2e-12 Score=119.06 Aligned_cols=128 Identities=17% Similarity=0.182 Sum_probs=103.3
Q ss_pred CCCeEEEECCcccHHHHHHHHH-hcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccc
Q 015035 115 DKVKGFDIGTGANCIYPLLGAS-LLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQ 193 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~-~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~~~p~~~~~~~~~~~~ 193 (414)
...+|||+|||+|.++..++.. .++.+++|+|+++.+++.|++|++.++ +.+++++++.|..+
T Consensus 93 ~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~--------------- 156 (255)
T 3mb5_A 93 PGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAG-FDDRVTIKLKDIYE--------------- 156 (255)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHT-CTTTEEEECSCGGG---------------
T ss_pred CCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcC-CCCceEEEECchhh---------------
Confidence 3468999999999999999987 568899999999999999999999986 87789998876421
Q ss_pred cccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccccccccCCCccccCCCCCcc
Q 015035 194 DESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEM 273 (414)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em 273 (414)
.+ .+++||+|++|||..
T Consensus 157 ----------------------------------------~~--~~~~~D~v~~~~~~~--------------------- 173 (255)
T 3mb5_A 157 ----------------------------------------GI--EEENVDHVILDLPQP--------------------- 173 (255)
T ss_dssp ----------------------------------------CC--CCCSEEEEEECSSCG---------------------
T ss_pred ----------------------------------------cc--CCCCcCEEEECCCCH---------------------
Confidence 11 245799999999832
Q ss_pred cccCChHHHHHHHHHHHHHhhccCcEEEEEeCCcCCHHHHHHHHHHcC--CceEEEEEec
Q 015035 274 VCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVG--VTIVKTTEFV 331 (414)
Q Consensus 274 ~~~GGe~~Fv~rii~eS~~l~~~~~w~t~mvgk~~~l~~l~~~l~~~g--~~~v~~~e~~ 331 (414)
..++++...+++++|++.+......+...+.+.|++.| +..+++.+..
T Consensus 174 ----------~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~g~~f~~~~~~e~~ 223 (255)
T 3mb5_A 174 ----------ERVVEHAAKALKPGGFFVAYTPCSNQVMRLHEKLREFKDYFMKPRTINVL 223 (255)
T ss_dssp ----------GGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHTGGGBSCCEEECCC
T ss_pred ----------HHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCccccEEEEEe
Confidence 12345556678888988777766778999999999999 9888888765
No 43
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.37 E-value=7.4e-12 Score=123.89 Aligned_cols=172 Identities=12% Similarity=0.076 Sum_probs=114.0
Q ss_pred hcCCcEEEecCCCeeCCCCCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHH
Q 015035 71 HDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDV 150 (414)
Q Consensus 71 ~~fgl~~~vp~gvLiPriP~R~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~ 150 (414)
.+||..+.++..+++|+ +....|-+.+..+.... . ..+.+|||||||+|+++..+++..+..+++++|+|+.
T Consensus 80 ~~~g~~l~ldg~~~~~~-~de~~y~e~l~~~~l~~-~------~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~ 151 (321)
T 2pt6_A 80 TTYGKVLVLDGVIQLTE-KDEFAYHEMMTHVPMTV-S------KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDET 151 (321)
T ss_dssp SSSCEEEEETTEEEEET-TTHHHHHHHHHHHHHHH-S------SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHH
T ss_pred CCCcEEEEECCEeeeCc-ccchHHHHHHHHHHHhc-C------CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHH
Confidence 47899999999899998 44444544444321110 0 1346999999999999999987666789999999999
Q ss_pred HHHHHHHHHHH--CCCC-CCcEEEEEccCCCCCCcccccccCCccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 015035 151 ALEWAEKNVKS--NPHI-SELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYH 227 (414)
Q Consensus 151 Al~~A~~N~~~--n~~l-~~rI~~~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (414)
+++.|++|+.. ++ + ..+++++.+|..+
T Consensus 152 ~l~~ar~~~~~~~~~-~~~~~v~~~~~D~~~------------------------------------------------- 181 (321)
T 2pt6_A 152 VIEVSKIYFKNISCG-YEDKRVNVFIEDASK------------------------------------------------- 181 (321)
T ss_dssp HHHHHHHHCTTTSGG-GGSTTEEEEESCHHH-------------------------------------------------
T ss_pred HHHHHHHHHHhhccc-cCCCcEEEEEccHHH-------------------------------------------------
Confidence 99999999875 22 3 3579998887421
Q ss_pred CCCccccccCCCCcEEEEEECCCcccccccccCCCccccCCCCCcccccCChHHHHHHHHHHHHHhhccCcEEEEEeCCc
Q 015035 228 GPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRK 307 (414)
Q Consensus 228 ~~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em~~~GGe~~Fv~rii~eS~~l~~~~~w~t~mvgk~ 307 (414)
.+. ...++||+|++|||-. ..|. . ..+-..++++...+++++|++.+..+..
T Consensus 182 ---~l~---~~~~~fDvIi~d~~~p-------~~~~-------~--------~l~~~~~l~~~~~~LkpgG~lv~~~~~~ 233 (321)
T 2pt6_A 182 ---FLE---NVTNTYDVIIVDSSDP-------IGPA-------E--------TLFNQNFYEKIYNALKPNGYCVAQCESL 233 (321)
T ss_dssp ---HHH---HCCSCEEEEEEECCCS-------SSGG-------G--------GGSSHHHHHHHHHHEEEEEEEEEEECCT
T ss_pred ---HHh---hcCCCceEEEECCcCC-------CCcc-------h--------hhhHHHHHHHHHHhcCCCcEEEEEcCCc
Confidence 011 1246899999998410 0110 0 0011455666678899999998876533
Q ss_pred -CC---HHHHHHHHHHcCCceEEEEE
Q 015035 308 -SN---LKFLISKLRKVGVTIVKTTE 329 (414)
Q Consensus 308 -~~---l~~l~~~l~~~g~~~v~~~e 329 (414)
.+ +..+.+.+++. +..++...
T Consensus 234 ~~~~~~~~~~~~~l~~~-F~~v~~~~ 258 (321)
T 2pt6_A 234 WIHVGTIKNMIGYAKKL-FKKVEYAN 258 (321)
T ss_dssp TTCHHHHHHHHHHHHTT-CSEEEEEE
T ss_pred ccCHHHHHHHHHHHHHH-CCCeEEEE
Confidence 23 45566666665 45555543
No 44
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.37 E-value=5.2e-11 Score=109.52 Aligned_cols=121 Identities=11% Similarity=0.010 Sum_probs=94.5
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccc
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~~~p~~~~~~~~~~~~~~ 195 (414)
..+|||||||+|.+++.++.. +.+|+|+|+|+.+++.|++|++.++ +.++++++++|..+
T Consensus 56 ~~~vLDlGcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~g-~~~~v~~~~~d~~~----------------- 115 (204)
T 3njr_A 56 GELLWDIGGGSGSVSVEWCLA--GGRAITIEPRADRIENIQKNIDTYG-LSPRMRAVQGTAPA----------------- 115 (204)
T ss_dssp TCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTT-CTTTEEEEESCTTG-----------------
T ss_pred CCEEEEecCCCCHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcC-CCCCEEEEeCchhh-----------------
Confidence 468999999999999998876 7899999999999999999999996 77689999887431
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccccccccCCCccccCCCCCcccc
Q 015035 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (414)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em~~ 275 (414)
.+ ...+.||+|++++.. +
T Consensus 116 -----------------------------------~~----~~~~~~D~v~~~~~~-------------------~---- 133 (204)
T 3njr_A 116 -----------------------------------AL----ADLPLPEAVFIGGGG-------------------S---- 133 (204)
T ss_dssp -----------------------------------GG----TTSCCCSEEEECSCC-------------------C----
T ss_pred -----------------------------------hc----ccCCCCCEEEECCcc-------------------c----
Confidence 01 112469999987622 0
Q ss_pred cCChHHHHHHHHHHHHHhhccCcEEEEEeCCcCCHHHHHHHHHHcCCceEE
Q 015035 276 SGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVK 326 (414)
Q Consensus 276 ~GGe~~Fv~rii~eS~~l~~~~~w~t~mvgk~~~l~~l~~~l~~~g~~~v~ 326 (414)
.. ++++...+++++|++.+......++..+.+.+++.|++...
T Consensus 134 -------~~-~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~g~~i~~ 176 (204)
T 3njr_A 134 -------QA-LYDRLWEWLAPGTRIVANAVTLESETLLTQLHARHGGQLLR 176 (204)
T ss_dssp -------HH-HHHHHHHHSCTTCEEEEEECSHHHHHHHHHHHHHHCSEEEE
T ss_pred -------HH-HHHHHHHhcCCCcEEEEEecCcccHHHHHHHHHhCCCcEEE
Confidence 12 55666777888888776666678899999999999965433
No 45
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.35 E-value=5e-12 Score=120.28 Aligned_cols=122 Identities=16% Similarity=0.087 Sum_probs=94.1
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccc
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~~~p~~~~~~~~~~~~~~ 195 (414)
..+|||+|||+|.+++.+++. +.+++|+|+|+.+++.|++|++.|+ +. ++++..|..
T Consensus 121 ~~~VLDiGcG~G~l~~~la~~--g~~v~gvDi~~~~v~~a~~n~~~~~-~~--v~~~~~d~~------------------ 177 (254)
T 2nxc_A 121 GDKVLDLGTGSGVLAIAAEKL--GGKALGVDIDPMVLPQAEANAKRNG-VR--PRFLEGSLE------------------ 177 (254)
T ss_dssp TCEEEEETCTTSHHHHHHHHT--TCEEEEEESCGGGHHHHHHHHHHTT-CC--CEEEESCHH------------------
T ss_pred CCEEEEecCCCcHHHHHHHHh--CCeEEEEECCHHHHHHHHHHHHHcC-Cc--EEEEECChh------------------
Confidence 368999999999999887764 3499999999999999999999996 64 787776531
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccccccccCCCccccCCCCCcccc
Q 015035 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (414)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em~~ 275 (414)
..+ ..++||+|+||+++.
T Consensus 178 -------------------------------------~~~--~~~~fD~Vv~n~~~~----------------------- 195 (254)
T 2nxc_A 178 -------------------------------------AAL--PFGPFDLLVANLYAE----------------------- 195 (254)
T ss_dssp -------------------------------------HHG--GGCCEEEEEEECCHH-----------------------
T ss_pred -------------------------------------hcC--cCCCCCEEEECCcHH-----------------------
Confidence 111 135799999998641
Q ss_pred cCChHHHHHHHHHHHHHhhccCcEEEE-EeCCcCCHHHHHHHHHHcCCceEEEEE
Q 015035 276 SGGERAFITRIIEDSVALKQTFRWYTS-MVGRKSNLKFLISKLRKVGVTIVKTTE 329 (414)
Q Consensus 276 ~GGe~~Fv~rii~eS~~l~~~~~w~t~-mvgk~~~l~~l~~~l~~~g~~~v~~~e 329 (414)
.+..++.+...+++++|++.+ .+. ..+...+.+.+++.|+..+.+.+
T Consensus 196 ------~~~~~l~~~~~~LkpgG~lils~~~-~~~~~~v~~~l~~~Gf~~~~~~~ 243 (254)
T 2nxc_A 196 ------LHAALAPRYREALVPGGRALLTGIL-KDRAPLVREAMAGAGFRPLEEAA 243 (254)
T ss_dssp ------HHHHHHHHHHHHEEEEEEEEEEEEE-GGGHHHHHHHHHHTTCEEEEEEE
T ss_pred ------HHHHHHHHHHHHcCCCCEEEEEeec-cCCHHHHHHHHHHCCCEEEEEec
Confidence 135667777778888887654 333 67899999999999998777665
No 46
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.35 E-value=8.5e-12 Score=116.83 Aligned_cols=131 Identities=11% Similarity=0.062 Sum_probs=97.6
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccc
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~~~p~~~~~~~~~~~~~~ 195 (414)
..+|||||||+|.+++.|+...++.+|+|+|+|+.+++.|++|++.++ +. +|+++++|..+
T Consensus 71 ~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~-~v~~~~~d~~~----------------- 131 (240)
T 1xdz_A 71 VNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQ-LE-NTTFCHDRAET----------------- 131 (240)
T ss_dssp CCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHT-CS-SEEEEESCHHH-----------------
T ss_pred CCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC-CC-CEEEEeccHHH-----------------
Confidence 468999999999999999987788999999999999999999999986 65 49999886421
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccccccccCCCccccCCCCCcccc
Q 015035 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (414)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em~~ 275 (414)
+... ....++||+|+|+.. .
T Consensus 132 -----------------------------------~~~~-~~~~~~fD~V~~~~~-------------------~----- 151 (240)
T 1xdz_A 132 -----------------------------------FGQR-KDVRESYDIVTARAV-------------------A----- 151 (240)
T ss_dssp -----------------------------------HTTC-TTTTTCEEEEEEECC-------------------S-----
T ss_pred -----------------------------------hccc-ccccCCccEEEEecc-------------------C-----
Confidence 0000 001368999999440 0
Q ss_pred cCChHHHHHHHHHHHHHhhccCcEEEEEeCCcC--CHHHHHHHHHHcCCceEEEEEec
Q 015035 276 SGGERAFITRIIEDSVALKQTFRWYTSMVGRKS--NLKFLISKLRKVGVTIVKTTEFV 331 (414)
Q Consensus 276 ~GGe~~Fv~rii~eS~~l~~~~~w~t~mvgk~~--~l~~l~~~l~~~g~~~v~~~e~~ 331 (414)
-+..++++...+++++|++.++.|... .+..+.+.+++.|+..+.+..+.
T Consensus 152 ------~~~~~l~~~~~~LkpgG~l~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~~ 203 (240)
T 1xdz_A 152 ------RLSVLSELCLPLVKKNGLFVALKAASAEEELNAGKKAITTLGGELENIHSFK 203 (240)
T ss_dssp ------CHHHHHHHHGGGEEEEEEEEEEECC-CHHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred ------CHHHHHHHHHHhcCCCCEEEEEeCCCchHHHHHHHHHHHHcCCeEeEEEEEe
Confidence 145677778888999999887777332 34567778889998776665543
No 47
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.34 E-value=1.2e-11 Score=122.68 Aligned_cols=150 Identities=17% Similarity=0.146 Sum_probs=103.0
Q ss_pred CcEEEecCCCeeCCCCCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHH
Q 015035 74 GLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALE 153 (414)
Q Consensus 74 gl~~~vp~gvLiPriP~R~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~ 153 (414)
++.+...++++.+.-.. ....++.+.+.. ....+|||||||+|.++..++...+.++++|+|+|+.+++
T Consensus 166 ~~~~~~~~gvf~~~~~d--~~~~~ll~~l~~---------~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~ 234 (343)
T 2pjd_A 166 GLTVKTLPGVFSRDGLD--VGSQLLLSTLTP---------HTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVE 234 (343)
T ss_dssp TEEEEECTTCTTSSSCC--HHHHHHHHHSCT---------TCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHH
T ss_pred ceEEEecCCccCCCCCc--HHHHHHHHhcCc---------CCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHH
Confidence 44566667777654221 122333333321 1235899999999999999998888889999999999999
Q ss_pred HHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccc
Q 015035 154 WAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLV 233 (414)
Q Consensus 154 ~A~~N~~~n~~l~~rI~~~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~ 233 (414)
.|++|++.++ +. ++++..|..+
T Consensus 235 ~a~~~~~~~~-~~--~~~~~~d~~~------------------------------------------------------- 256 (343)
T 2pjd_A 235 ASRATLAANG-VE--GEVFASNVFS------------------------------------------------------- 256 (343)
T ss_dssp HHHHHHHHTT-CC--CEEEECSTTT-------------------------------------------------------
T ss_pred HHHHHHHHhC-CC--CEEEEccccc-------------------------------------------------------
Confidence 9999999985 54 4556655321
Q ss_pred cccCCCCcEEEEEECCCcccccccccCCCccccCCCCCcccccCChHHHHHHHHHHHHHhhccCcEEEEEeCCcCCHHHH
Q 015035 234 GVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFL 313 (414)
Q Consensus 234 ~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em~~~GGe~~Fv~rii~eS~~l~~~~~w~t~mvgk~~~l~~l 313 (414)
. ..++||+|+|||||..... . ...-..+++++...+++++|++.+..........+
T Consensus 257 ~---~~~~fD~Iv~~~~~~~g~~--------------~-------~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~ 312 (343)
T 2pjd_A 257 E---VKGRFDMIISNPPFHDGMQ--------------T-------SLDAAQTLIRGAVRHLNSGGELRIVANAFLPYPDV 312 (343)
T ss_dssp T---CCSCEEEEEECCCCCSSSH--------------H-------HHHHHHHHHHHHGGGEEEEEEEEEEEETTSSHHHH
T ss_pred c---ccCCeeEEEECCCcccCcc--------------C-------CHHHHHHHHHHHHHhCCCCcEEEEEEcCCCCcHHH
Confidence 0 1358999999999963110 0 23346778888888999999887666555555544
Q ss_pred HHH
Q 015035 314 ISK 316 (414)
Q Consensus 314 ~~~ 316 (414)
...
T Consensus 313 l~~ 315 (343)
T 2pjd_A 313 LDE 315 (343)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 48
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.34 E-value=9.2e-12 Score=115.79 Aligned_cols=149 Identities=15% Similarity=0.097 Sum_probs=102.1
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccc
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~~~p~~~~~~~~~~~~~~ 195 (414)
..+|||+|||+|.+++.++.. +.+|+|+|+|+.+++.|++|++.++ +.++++++++|..+
T Consensus 79 ~~~vLD~gcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~~~d~~~----------------- 138 (241)
T 3gdh_A 79 CDVVVDAFCGVGGNTIQFALT--GMRVIAIDIDPVKIALARNNAEVYG-IADKIEFICGDFLL----------------- 138 (241)
T ss_dssp CSEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTT-CGGGEEEEESCHHH-----------------
T ss_pred CCEEEECccccCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcC-CCcCeEEEECChHH-----------------
Confidence 468999999999999999874 4899999999999999999999996 77789999887421
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccccccccCCCccccCCCCCcccc
Q 015035 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (414)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em~~ 275 (414)
+. ..++||+|+|||||........ . ......++.
T Consensus 139 -----------------------------------~~-----~~~~~D~v~~~~~~~~~~~~~~-----~-~~~~~~~L~ 172 (241)
T 3gdh_A 139 -----------------------------------LA-----SFLKADVVFLSPPWGGPDYATA-----E-TFDIRTMMS 172 (241)
T ss_dssp -----------------------------------HG-----GGCCCSEEEECCCCSSGGGGGS-----S-SBCTTTSCS
T ss_pred -----------------------------------hc-----ccCCCCEEEECCCcCCcchhhh-----H-HHHHHhhcC
Confidence 00 2368999999999986433211 1 112344566
Q ss_pred cCChHHHHHHHHHHHHHhhccCcEEEEEeCCcCCHHHHHHHHHHcCCceEEEEEecCCCeeEEE
Q 015035 276 SGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWG 339 (414)
Q Consensus 276 ~GGe~~Fv~rii~eS~~l~~~~~w~t~mvgk~~~l~~l~~~l~~~g~~~v~~~e~~qG~t~Rw~ 339 (414)
|||- ++ ++....+.....+ .+.+...+..+..+|...|...+.. ...+|...+..
T Consensus 173 pgG~--~i---~~~~~~~~~~~~~---~lp~~~~~~~~~~~l~~~g~~~i~~-~~~~~~~k~~~ 227 (241)
T 3gdh_A 173 PDGF--EI---FRLSKKITNNIVY---FLPRNADIDQVASLAGPGGQVEIEQ-NFLNNKLKTIT 227 (241)
T ss_dssp SCHH--HH---HHHHHHHCSCEEE---EEETTBCHHHHHHTTCTTCCEEEEE-EEETTEEEEEE
T ss_pred Ccce--eH---HHHHHhhCCceEE---ECCCCCCHHHHHHHhccCCCEEEEe-hhhcCccceEE
Confidence 7764 22 2333334433333 3455778888888888777654433 34567655543
No 49
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.34 E-value=2.4e-11 Score=116.98 Aligned_cols=89 Identities=11% Similarity=-0.025 Sum_probs=67.8
Q ss_pred cCCcEEEecCCC--eeCCCCCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcH
Q 015035 72 DHGLNWWIPDGQ--LCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTD 149 (414)
Q Consensus 72 ~fgl~~~vp~gv--LiPriP~R~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~ 149 (414)
..|+.|.++++. +.|+. .... +. ++.. + ....+|||+|||+|.+++.++...+..+|+|+|+++
T Consensus 88 e~g~~f~~~~~~~f~~~~~----~~e~-~~-~~~~--~------~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~ 153 (272)
T 3a27_A 88 EYGCLFKLDVAKIMWSQGN----IEER-KR-MAFI--S------NENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNP 153 (272)
T ss_dssp ETTEEEEEETTTSCCCGGG----HHHH-HH-HHTS--C------CTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCH
T ss_pred ECCEEEEEechhEEECCCc----hHHH-HH-HHHh--c------CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCH
Confidence 478999998887 66652 1111 11 1221 1 134689999999999999999877777999999999
Q ss_pred HHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 150 VALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 150 ~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
.|++.|++|++.|+ +. ++.++++|.
T Consensus 154 ~av~~a~~n~~~n~-l~-~~~~~~~d~ 178 (272)
T 3a27_A 154 TAYHYLCENIKLNK-LN-NVIPILADN 178 (272)
T ss_dssp HHHHHHHHHHHHTT-CS-SEEEEESCG
T ss_pred HHHHHHHHHHHHcC-CC-CEEEEECCh
Confidence 99999999999996 75 578888774
No 50
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.34 E-value=2.1e-11 Score=113.30 Aligned_cols=126 Identities=12% Similarity=0.112 Sum_probs=97.0
Q ss_pred CCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCcccc
Q 015035 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~~~p~~~~~~~~~~~~~ 194 (414)
...+|||+|||+|.++..++.. +.+++++|+++.+++.|++|.+.++ +..+++++..|..+
T Consensus 91 ~~~~vldiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~-~~~~~~~~~~d~~~---------------- 151 (248)
T 2yvl_A 91 KEKRVLEFGTGSGALLAVLSEV--AGEVWTFEAVEEFYKTAQKNLKKFN-LGKNVKFFNVDFKD---------------- 151 (248)
T ss_dssp TTCEEEEECCTTSHHHHHHHHH--SSEEEEECSCHHHHHHHHHHHHHTT-CCTTEEEECSCTTT----------------
T ss_pred CCCEEEEeCCCccHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcC-CCCcEEEEEcChhh----------------
Confidence 3468999999999999998886 7799999999999999999999885 76788888776431
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccccccccCCCccccCCCCCccc
Q 015035 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMV 274 (414)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em~ 274 (414)
.+ ..++.||+|++|||- |
T Consensus 152 ------------------------------------~~----~~~~~~D~v~~~~~~----------~------------ 169 (248)
T 2yvl_A 152 ------------------------------------AE----VPEGIFHAAFVDVRE----------P------------ 169 (248)
T ss_dssp ------------------------------------SC----CCTTCBSEEEECSSC----------G------------
T ss_pred ------------------------------------cc----cCCCcccEEEECCcC----------H------------
Confidence 00 013579999999871 1
Q ss_pred ccCChHHHHHHHHHHHHHhhccCcEEEEEeCCcCCHHHHHHHHHHcCCceEEEEEec
Q 015035 275 CSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFV 331 (414)
Q Consensus 275 ~~GGe~~Fv~rii~eS~~l~~~~~w~t~mvgk~~~l~~l~~~l~~~g~~~v~~~e~~ 331 (414)
. .++++...+++++|++.+......++..+...|++. +..+++.+..
T Consensus 170 -----~----~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~-f~~~~~~~~~ 216 (248)
T 2yvl_A 170 -----W----HYLEKVHKSLMEGAPVGFLLPTANQVIKLLESIENY-FGNLEVVEIL 216 (248)
T ss_dssp -----G----GGHHHHHHHBCTTCEEEEEESSHHHHHHHHHHSTTT-EEEEEEEEEE
T ss_pred -----H----HHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhh-CCcceEEEee
Confidence 0 123455667888999888888677888888888887 7777666543
No 51
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.33 E-value=7.9e-12 Score=125.72 Aligned_cols=139 Identities=16% Similarity=0.013 Sum_probs=98.7
Q ss_pred CCCeEEEECCcccHHHHHHHHHh-cCCeeEEecCcHHHHHHHHHHHHHC-----C-CCCCcEEEEEccCCCCCCcccccc
Q 015035 115 DKVKGFDIGTGANCIYPLLGASL-LGWSFVGSDMTDVALEWAEKNVKSN-----P-HISELIEIRKVDNSESTPSIQESL 187 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~-~~~~vvgvDis~~Al~~A~~N~~~n-----~-~l~~rI~~~~~d~~~~~p~~~~~~ 187 (414)
.+.+|||||||+|.++..|+... ++.+|+|+|+++.+++.|++|++.+ + ....++++++.|..+..
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~------- 155 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLA------- 155 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGG-------
T ss_pred CCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhh-------
Confidence 45699999999999999999876 6889999999999999999998764 1 11257999998753200
Q ss_pred cCCccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccccccccCCCccccC
Q 015035 188 TGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCG 267 (414)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~ 267 (414)
. +......+++||+|+||..+....
T Consensus 156 ------------------------------------------~-~~~~~~~~~~fD~V~~~~~l~~~~------------ 180 (383)
T 4fsd_A 156 ------------------------------------------T-AEPEGVPDSSVDIVISNCVCNLST------------ 180 (383)
T ss_dssp ------------------------------------------G-CBSCCCCTTCEEEEEEESCGGGCS------------
T ss_pred ------------------------------------------h-cccCCCCCCCEEEEEEccchhcCC------------
Confidence 0 000001256899999997664211
Q ss_pred CCCCcccccCChHHHHHHHHHHHHHhhccCcEEEEE-eC---------------------CcCCHHHHHHHHHHcCCceE
Q 015035 268 GTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSM-VG---------------------RKSNLKFLISKLRKVGVTIV 325 (414)
Q Consensus 268 g~~~Em~~~GGe~~Fv~rii~eS~~l~~~~~w~t~m-vg---------------------k~~~l~~l~~~l~~~g~~~v 325 (414)
+ ...++++...+++++|++.+. +. ..-....+.++|++.|+..+
T Consensus 181 ---d-----------~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~v 246 (383)
T 4fsd_A 181 ---N-----------KLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDPILYGECLGGALYLEDFRRLVAEAGFRDV 246 (383)
T ss_dssp ---C-----------HHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHHHHHHHHHHTTCCCE
T ss_pred ---C-----------HHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhhHHHhhcccccCCCHHHHHHHHHHCCCceE
Confidence 1 235667777788888887553 22 12345889999999999877
Q ss_pred EEEE
Q 015035 326 KTTE 329 (414)
Q Consensus 326 ~~~e 329 (414)
++.+
T Consensus 247 ~~~~ 250 (383)
T 4fsd_A 247 RLVS 250 (383)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 7654
No 52
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.33 E-value=3.5e-11 Score=112.27 Aligned_cols=77 Identities=17% Similarity=0.199 Sum_probs=61.6
Q ss_pred CCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCc
Q 015035 89 PNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISEL 168 (414)
Q Consensus 89 P~R~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~r 168 (414)
|.....+.++.+.+.. ....+|||||||+|.++..++... +.+++|+|+|+.+++.|+++++.++ +.++
T Consensus 19 ~~~~~~~~~l~~~~~~---------~~~~~VLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~l~~a~~~~~~~~-~~~~ 87 (256)
T 1nkv_A 19 PFTEEKYATLGRVLRM---------KPGTRILDLGSGSGEMLCTWARDH-GITGTGIDMSSLFTAQAKRRAEELG-VSER 87 (256)
T ss_dssp SCCHHHHHHHHHHTCC---------CTTCEEEEETCTTCHHHHHHHHHT-CCEEEEEESCHHHHHHHHHHHHHTT-CTTT
T ss_pred CCCHHHHHHHHHhcCC---------CCCCEEEEECCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcC-CCcc
Confidence 3345555555555432 234689999999999999888766 6799999999999999999999886 7778
Q ss_pred EEEEEccC
Q 015035 169 IEIRKVDN 176 (414)
Q Consensus 169 I~~~~~d~ 176 (414)
+++++.|.
T Consensus 88 v~~~~~d~ 95 (256)
T 1nkv_A 88 VHFIHNDA 95 (256)
T ss_dssp EEEEESCC
T ss_pred eEEEECCh
Confidence 99998875
No 53
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.33 E-value=1.4e-11 Score=119.29 Aligned_cols=61 Identities=18% Similarity=0.161 Sum_probs=54.1
Q ss_pred CCCeEEEECCcccHHHHHHH-HHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 115 DKVKGFDIGTGANCIYPLLG-ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La-~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
...+|||||||+|.++..++ ...++.+|+|+|+|+.+++.|++|+..++ +.++++++++|.
T Consensus 118 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~v~~~~~d~ 179 (305)
T 3ocj_A 118 PGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHA-LAGQITLHRQDA 179 (305)
T ss_dssp TTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTST-TGGGEEEEECCG
T ss_pred CCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcC-CCCceEEEECch
Confidence 34689999999999998886 45678999999999999999999999886 888899999874
No 54
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.33 E-value=1.5e-11 Score=124.70 Aligned_cols=60 Identities=18% Similarity=0.184 Sum_probs=51.8
Q ss_pred CCeEEEECCcccHHHHHHHHHhcC--------------------------------------CeeEEecCcHHHHHHHHH
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLG--------------------------------------WSFVGSDMTDVALEWAEK 157 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~--------------------------------------~~vvgvDis~~Al~~A~~ 157 (414)
...+||+|||||.+.+.+|....+ .+|+|+|+|+.|++.|++
T Consensus 196 ~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~Ar~ 275 (385)
T 3ldu_A 196 GRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIARE 275 (385)
T ss_dssp TSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHHHH
T ss_pred CCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHHHH
Confidence 468999999999999887765322 579999999999999999
Q ss_pred HHHHCCCCCCcEEEEEccC
Q 015035 158 NVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 158 N~~~n~~l~~rI~~~~~d~ 176 (414)
|++.++ +.+.|++.+.|.
T Consensus 276 Na~~~g-l~~~i~~~~~D~ 293 (385)
T 3ldu_A 276 NAEIAG-VDEYIEFNVGDA 293 (385)
T ss_dssp HHHHHT-CGGGEEEEECCG
T ss_pred HHHHcC-CCCceEEEECCh
Confidence 999996 888899999875
No 55
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.33 E-value=2.6e-11 Score=123.10 Aligned_cols=61 Identities=13% Similarity=0.161 Sum_probs=52.2
Q ss_pred CCeEEEECCcccHHHHHHHHHhcC--------------------------------------CeeEEecCcHHHHHHHHH
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLG--------------------------------------WSFVGSDMTDVALEWAEK 157 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~--------------------------------------~~vvgvDis~~Al~~A~~ 157 (414)
...+||.+||||.|.+.+|....+ .+++|+|+|+.|++.|++
T Consensus 195 ~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~Ar~ 274 (384)
T 3ldg_A 195 DKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIARK 274 (384)
T ss_dssp TSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHHH
T ss_pred CCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHHHH
Confidence 358999999999999887754333 469999999999999999
Q ss_pred HHHHCCCCCCcEEEEEccCC
Q 015035 158 NVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 158 N~~~n~~l~~rI~~~~~d~~ 177 (414)
|++.++ +.++|++++.|..
T Consensus 275 Na~~~g-l~~~I~~~~~D~~ 293 (384)
T 3ldg_A 275 NAREVG-LEDVVKLKQMRLQ 293 (384)
T ss_dssp HHHHTT-CTTTEEEEECCGG
T ss_pred HHHHcC-CCCceEEEECChH
Confidence 999996 8889999998753
No 56
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.33 E-value=2.2e-11 Score=107.13 Aligned_cols=123 Identities=13% Similarity=0.009 Sum_probs=93.2
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccc
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~~~p~~~~~~~~~~~~~~ 195 (414)
..+|||+|||+|.++..++...++.+++|+|+|+.+++.|++|++.++ +.+++ ++..|..+
T Consensus 26 ~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~-~~~~~-~~~~d~~~----------------- 86 (178)
T 3hm2_A 26 HETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLG-VSDRI-AVQQGAPR----------------- 86 (178)
T ss_dssp TEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTT-CTTSE-EEECCTTG-----------------
T ss_pred CCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhC-CCCCE-EEecchHh-----------------
Confidence 458999999999999999988888999999999999999999999886 77678 77765321
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccccccccCCCccccCCCCCcccc
Q 015035 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (414)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em~~ 275 (414)
.+. ...++||+|+|+.++..
T Consensus 87 -----------------------------------~~~---~~~~~~D~i~~~~~~~~---------------------- 106 (178)
T 3hm2_A 87 -----------------------------------AFD---DVPDNPDVIFIGGGLTA---------------------- 106 (178)
T ss_dssp -----------------------------------GGG---GCCSCCSEEEECC-TTC----------------------
T ss_pred -----------------------------------hhh---ccCCCCCEEEECCcccH----------------------
Confidence 011 11268999999987731
Q ss_pred cCChHHHHHHHHHHHHHhhccCcEEEEEeCCcCCHHHHHHHHHHcCCceE
Q 015035 276 SGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIV 325 (414)
Q Consensus 276 ~GGe~~Fv~rii~eS~~l~~~~~w~t~mvgk~~~l~~l~~~l~~~g~~~v 325 (414)
..++++...+++++|++........+...+...+++.|....
T Consensus 107 --------~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (178)
T 3hm2_A 107 --------PGVFAAAWKRLPVGGRLVANAVTVESEQMLWALRKQFGGTIS 148 (178)
T ss_dssp --------TTHHHHHHHTCCTTCEEEEEECSHHHHHHHHHHHHHHCCEEE
T ss_pred --------HHHHHHHHHhcCCCCEEEEEeeccccHHHHHHHHHHcCCeeE
Confidence 234455566788888776555546678888999999986543
No 57
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.33 E-value=2.9e-11 Score=114.24 Aligned_cols=60 Identities=15% Similarity=0.116 Sum_probs=54.3
Q ss_pred CCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
.+.+|||||||+|.++..++.. ++.+++|+|+|+.+++.|+++++.++ +.++++++..|.
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~-~~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~v~~~~~d~ 105 (267)
T 3kkz_A 46 EKSLIADIGCGTGGQTMVLAGH-VTGQVTGLDFLSGFIDIFNRNARQSG-LQNRVTGIVGSM 105 (267)
T ss_dssp TTCEEEEETCTTCHHHHHHHTT-CSSEEEEEESCHHHHHHHHHHHHHTT-CTTTEEEEECCT
T ss_pred CCCEEEEeCCCCCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHHHHHHcC-CCcCcEEEEcCh
Confidence 3469999999999999998886 77799999999999999999999986 888899999875
No 58
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.32 E-value=5.7e-11 Score=110.89 Aligned_cols=59 Identities=19% Similarity=0.148 Sum_probs=53.7
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
..+|||||||+|.++..++...+. +++|+|+|+.+++.|++++..++ +.++++++..|.
T Consensus 47 ~~~vLDiG~G~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~~~d~ 105 (257)
T 3f4k_A 47 DAKIADIGCGTGGQTLFLADYVKG-QITGIDLFPDFIEIFNENAVKAN-CADRVKGITGSM 105 (257)
T ss_dssp TCEEEEETCTTSHHHHHHHHHCCS-EEEEEESCHHHHHHHHHHHHHTT-CTTTEEEEECCT
T ss_pred CCeEEEeCCCCCHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHcC-CCCceEEEECCh
Confidence 469999999999999999987765 99999999999999999999996 888899999875
No 59
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.32 E-value=1.6e-11 Score=124.93 Aligned_cols=60 Identities=18% Similarity=0.205 Sum_probs=51.6
Q ss_pred CCeEEEECCcccHHHHHHHHHhcC--------------------------------------CeeEEecCcHHHHHHHHH
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLG--------------------------------------WSFVGSDMTDVALEWAEK 157 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~--------------------------------------~~vvgvDis~~Al~~A~~ 157 (414)
...+||++||||.+.+.+|....+ .+|+|+|+|+.|++.|++
T Consensus 202 ~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~Ar~ 281 (393)
T 3k0b_A 202 DRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIAKQ 281 (393)
T ss_dssp TSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHHH
T ss_pred CCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHHHH
Confidence 358999999999998877764332 469999999999999999
Q ss_pred HHHHCCCCCCcEEEEEccC
Q 015035 158 NVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 158 N~~~n~~l~~rI~~~~~d~ 176 (414)
|++.++ +.++|++++.|.
T Consensus 282 Na~~~g-l~~~I~~~~~D~ 299 (393)
T 3k0b_A 282 NAVEAG-LGDLITFRQLQV 299 (393)
T ss_dssp HHHHTT-CTTCSEEEECCG
T ss_pred HHHHcC-CCCceEEEECCh
Confidence 999996 888899999875
No 60
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.32 E-value=5.8e-12 Score=136.95 Aligned_cols=135 Identities=19% Similarity=0.207 Sum_probs=98.2
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCC-CcEEEEEccCCCCCCcccccccCCcccc
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHIS-ELIEIRKVDNSESTPSIQESLTGKSVQD 194 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~-~rI~~~~~d~~~~~p~~~~~~~~~~~~~ 194 (414)
..+|||+|||+|.+++.++.. ...+|+++|+|+.++++|++|++.|+ +. ++++++++|..+
T Consensus 540 g~~VLDlg~GtG~~sl~aa~~-ga~~V~aVD~s~~al~~a~~N~~~ng-l~~~~v~~i~~D~~~---------------- 601 (703)
T 3v97_A 540 GKDFLNLFSYTGSATVHAGLG-GARSTTTVDMSRTYLEWAERNLRLNG-LTGRAHRLIQADCLA---------------- 601 (703)
T ss_dssp TCEEEEESCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTT-CCSTTEEEEESCHHH----------------
T ss_pred CCcEEEeeechhHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcC-CCccceEEEecCHHH----------------
Confidence 468999999999999888763 22469999999999999999999996 76 689999987421
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccccccccCCCccccCCCCCccc
Q 015035 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMV 274 (414)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em~ 274 (414)
++.. ..++||+|+||||||....... +..+
T Consensus 602 ------------------------------------~l~~---~~~~fD~Ii~DPP~f~~~~~~~--------~~~~--- 631 (703)
T 3v97_A 602 ------------------------------------WLRE---ANEQFDLIFIDPPTFSNSKRME--------DAFD--- 631 (703)
T ss_dssp ------------------------------------HHHH---CCCCEEEEEECCCSBC---------------CCB---
T ss_pred ------------------------------------HHHh---cCCCccEEEECCccccCCccch--------hHHH---
Confidence 1111 2468999999999996532110 0111
Q ss_pred ccCChHHHHHHHHHHHHHhhccCcEEEEEeCCcCCHHHHHHHHHHcCCc
Q 015035 275 CSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVT 323 (414)
Q Consensus 275 ~~GGe~~Fv~rii~eS~~l~~~~~w~t~mvgk~~~l~~l~~~l~~~g~~ 323 (414)
....+.+++..+..+++++|++.+... ..+...-.+.+.+.|+.
T Consensus 632 ----~~~~~~~ll~~a~~~LkpgG~L~~s~~-~~~~~~~~~~l~~~g~~ 675 (703)
T 3v97_A 632 ----VQRDHLALMKDLKRLLRAGGTIMFSNN-KRGFRMDLDGLAKLGLK 675 (703)
T ss_dssp ----HHHHHHHHHHHHHHHEEEEEEEEEEEC-CTTCCCCHHHHHHTTEE
T ss_pred ----HHHHHHHHHHHHHHhcCCCcEEEEEEC-CcccccCHHHHHHcCCc
Confidence 467889999999999999999876665 32333335667777764
No 61
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.31 E-value=7.4e-12 Score=124.07 Aligned_cols=136 Identities=15% Similarity=0.095 Sum_probs=95.4
Q ss_pred CCeEEEECCcccHHHHHHHHHhcC-----CeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLG-----WSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~-----~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~~~p~~~~~~~~~ 190 (414)
..+|||+|||||.+.+.++...+. .+++|+|+++.+++.|+.|+..++ + ++.++++|...
T Consensus 131 ~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g-~--~~~i~~~D~l~------------ 195 (344)
T 2f8l_A 131 NVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQR-Q--KMTLLHQDGLA------------ 195 (344)
T ss_dssp EEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHT-C--CCEEEESCTTS------------
T ss_pred CCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCC-C--CceEEECCCCC------------
Confidence 468999999999999998887764 789999999999999999999885 5 57888877431
Q ss_pred ccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcc--cccccc-cCCCccccC
Q 015035 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFF--ESMEEA-GLNPKTSCG 267 (414)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~--~s~ee~-~~~P~~a~~ 267 (414)
.. ..++||+|||||||. +..+.. .++|..
T Consensus 196 -------------------------------------------~~--~~~~fD~Ii~NPPfg~~~~~~~~~~~~~~~--- 227 (344)
T 2f8l_A 196 -------------------------------------------NL--LVDPVDVVISDLPVGYYPDDENAKTFELCR--- 227 (344)
T ss_dssp -------------------------------------------CC--CCCCEEEEEEECCCSEESCHHHHTTSTTCC---
T ss_pred -------------------------------------------cc--ccCCccEEEECCCCCCcCchhhhhhccccC---
Confidence 00 135799999999963 221111 122211
Q ss_pred CCCCcccccCChHHHHHHHHHHHHHhhccCcEEEEEeC----CcCCHHHHHHHHHHcCC
Q 015035 268 GTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVG----RKSNLKFLISKLRKVGV 322 (414)
Q Consensus 268 g~~~Em~~~GGe~~Fv~rii~eS~~l~~~~~w~t~mvg----k~~~l~~l~~~l~~~g~ 322 (414)
+.|-......+++.+..+++++|++.+.+. ...+...+.+.|.+.+.
T Consensus 228 --------~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~~~~~~~~~~ir~~l~~~~~ 278 (344)
T 2f8l_A 228 --------EEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGTSDFAKVDKFIKKNGH 278 (344)
T ss_dssp --------SSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGGGGGSTTHHHHHHHHHHHEE
T ss_pred --------CCCcchHHHHHHHHHHHHhCCCCEEEEEECchhcCCchHHHHHHHHHhCCe
Confidence 112222233456666778888888877761 24567889999888875
No 62
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.31 E-value=3.2e-11 Score=117.54 Aligned_cols=60 Identities=10% Similarity=0.112 Sum_probs=53.6
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
+.+|||+|||+|.+++.+|++ ...+|+|+|+||.|++.|++|++.|+ ++++|++++.|..
T Consensus 126 g~~VlD~~aG~G~~~i~~a~~-g~~~V~avD~np~a~~~~~~N~~~N~-v~~~v~~~~~D~~ 185 (278)
T 3k6r_A 126 DELVVDMFAGIGHLSLPIAVY-GKAKVIAIEKDPYTFKFLVENIHLNK-VEDRMSAYNMDNR 185 (278)
T ss_dssp TCEEEETTCTTTTTTHHHHHH-TCCEEEEECCCHHHHHHHHHHHHHTT-CTTTEEEECSCTT
T ss_pred CCEEEEecCcCcHHHHHHHHh-cCCeEEEEECCHHHHHHHHHHHHHcC-CCCcEEEEeCcHH
Confidence 468999999999999888764 45699999999999999999999996 9999999988854
No 63
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.31 E-value=2.1e-11 Score=123.21 Aligned_cols=137 Identities=17% Similarity=0.081 Sum_probs=94.0
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCC-CCcEEEEEccCCCCCCcccccccCCcccc
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHI-SELIEIRKVDNSESTPSIQESLTGKSVQD 194 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l-~~rI~~~~~d~~~~~p~~~~~~~~~~~~~ 194 (414)
..+|||+|||+|.+++.++... ..+|+|+|+|+.+++.|++|++.|+ + .++++++.+|..+
T Consensus 221 ~~~VLDl~cG~G~~sl~la~~g-~~~V~~vD~s~~al~~a~~n~~~ng-l~~~~v~~~~~D~~~---------------- 282 (396)
T 3c0k_A 221 NKRVLNCFSYTGGFAVSALMGG-CSQVVSVDTSQEALDIARQNVELNK-LDLSKAEFVRDDVFK---------------- 282 (396)
T ss_dssp TCEEEEESCTTCSHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTT-CCGGGEEEEESCHHH----------------
T ss_pred CCeEEEeeccCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcC-CCccceEEEECCHHH----------------
Confidence 3589999999999999988743 4589999999999999999999996 8 6689999887421
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccccccccCCCccccCCCCCccc
Q 015035 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMV 274 (414)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em~ 274 (414)
++.......++||+|++||||+...... . ..
T Consensus 283 ------------------------------------~~~~~~~~~~~fD~Ii~dpP~~~~~~~~------~-~~------ 313 (396)
T 3c0k_A 283 ------------------------------------LLRTYRDRGEKFDVIVMDPPKFVENKSQ------L-MG------ 313 (396)
T ss_dssp ------------------------------------HHHHHHHTTCCEEEEEECCSSTTTCSSS------S-SC------
T ss_pred ------------------------------------HHHHHHhcCCCCCEEEECCCCCCCChhH------H-HH------
Confidence 1111111246899999999998643211 0 00
Q ss_pred ccCChHHHHHHHHHHHHHhhccCcEEEEEeCCcC-C----HHHHHHHHHHcCCc
Q 015035 275 CSGGERAFITRIIEDSVALKQTFRWYTSMVGRKS-N----LKFLISKLRKVGVT 323 (414)
Q Consensus 275 ~~GGe~~Fv~rii~eS~~l~~~~~w~t~mvgk~~-~----l~~l~~~l~~~g~~ 323 (414)
...-+..++.++..+++++|++.+...... . .+.+.+.+.+.|..
T Consensus 314 ----~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~ 363 (396)
T 3c0k_A 314 ----ACRGYKDINMLAIQLLNEGGILLTFSCSGLMTSDLFQKIIADAAIDAGRD 363 (396)
T ss_dssp ----CCTHHHHHHHHHHHTEEEEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCC
T ss_pred ----HHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHHHHHHHcCCe
Confidence 123456777788888888887654433222 2 23334466677754
No 64
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.30 E-value=2.5e-11 Score=121.84 Aligned_cols=132 Identities=20% Similarity=0.121 Sum_probs=97.4
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccc
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~~~p~~~~~~~~~~~~~~ 195 (414)
+.+||||| |+|.+++.++...+..+|+|+|+|+.+++.|++|++.++ +. +|+++++|..+.
T Consensus 173 ~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g-~~-~v~~~~~D~~~~---------------- 233 (373)
T 2qm3_A 173 NKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIG-YE-DIEIFTFDLRKP---------------- 233 (373)
T ss_dssp TCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHT-CC-CEEEECCCTTSC----------------
T ss_pred CCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC-CC-CEEEEEChhhhh----------------
Confidence 46899999 999999999877666799999999999999999999986 75 799998875320
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccccccccCCCccccCCCCCcccc
Q 015035 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (414)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em~~ 275 (414)
+.. ...++||+|++||||...
T Consensus 234 ------------------------------------l~~--~~~~~fD~Vi~~~p~~~~--------------------- 254 (373)
T 2qm3_A 234 ------------------------------------LPD--YALHKFDTFITDPPETLE--------------------- 254 (373)
T ss_dssp ------------------------------------CCT--TTSSCBSEEEECCCSSHH---------------------
T ss_pred ------------------------------------chh--hccCCccEEEECCCCchH---------------------
Confidence 000 013579999999999631
Q ss_pred cCChHHHHHHHHHHHHHhhccCc-EEEEEeCC-cCCH---HHHHHHHH-HcCCceEEEEEec
Q 015035 276 SGGERAFITRIIEDSVALKQTFR-WYTSMVGR-KSNL---KFLISKLR-KVGVTIVKTTEFV 331 (414)
Q Consensus 276 ~GGe~~Fv~rii~eS~~l~~~~~-w~t~mvgk-~~~l---~~l~~~l~-~~g~~~v~~~e~~ 331 (414)
+ ...+++++.+.++++| +..+.+.. ..+. ..+.+.+. +.|+....+..++
T Consensus 255 ---~---~~~~l~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~ 310 (373)
T 2qm3_A 255 ---A---IRAFVGRGIATLKGPRCAGYFGITRRESSLDKWREIQKLLLNEFNVVITDIIRNF 310 (373)
T ss_dssp ---H---HHHHHHHHHHTBCSTTCEEEEEECTTTCCHHHHHHHHHHHHHTSCCEEEEEEEEE
T ss_pred ---H---HHHHHHHHHHHcccCCeEEEEEEecCcCCHHHHHHHHHHHHHhcCcchhhhhhhh
Confidence 1 2566777778888877 42334442 4566 67788888 8888655555543
No 65
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.29 E-value=3.7e-12 Score=128.19 Aligned_cols=137 Identities=17% Similarity=0.153 Sum_probs=92.6
Q ss_pred CCeEEEECCcccHHHHHHHHHh-cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCcccc
Q 015035 116 KVKGFDIGTGANCIYPLLGASL-LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~-~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~~~p~~~~~~~~~~~~~ 194 (414)
..+|||+|||+|.+++.++.+. +..+++|+|+|+.+++.| .+++++++|..+
T Consensus 40 ~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a-----------~~~~~~~~D~~~---------------- 92 (421)
T 2ih2_A 40 GGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP-----------PWAEGILADFLL---------------- 92 (421)
T ss_dssp TCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC-----------TTEEEEESCGGG----------------
T ss_pred CCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC-----------CCCcEEeCChhh----------------
Confidence 3599999999999999998876 678999999999998877 247888877421
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCccccccccc----CCCcc-ccCCC
Q 015035 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAG----LNPKT-SCGGT 269 (414)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~~s~ee~~----~~P~~-a~~g~ 269 (414)
. ...++||+|+|||||+....... ..+.. ...
T Consensus 93 ---------------------------------------~--~~~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~-- 129 (421)
T 2ih2_A 93 ---------------------------------------W--EPGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLY-- 129 (421)
T ss_dssp ---------------------------------------C--CCSSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHH--
T ss_pred ---------------------------------------c--CccCCCCEEEECcCccCcccccccccccCHHHHHHH--
Confidence 0 01358999999999987543110 00000 000
Q ss_pred CCcccccCChHHHHHHHHHHHHHhhccCcEEEEEeCCc----CCHHHHHHHHHHcCC
Q 015035 270 PEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRK----SNLKFLISKLRKVGV 322 (414)
Q Consensus 270 ~~Em~~~GGe~~Fv~rii~eS~~l~~~~~w~t~mvgk~----~~l~~l~~~l~~~g~ 322 (414)
.......+|....+..+++.+..+++++|.+.+.+... .+.+.+.+.|.+.+.
T Consensus 130 ~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~~l~~~~~~~lr~~l~~~~~ 186 (421)
T 2ih2_A 130 KKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWLVLEDFALLREFLAREGK 186 (421)
T ss_dssp HHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGGGGTCGGGHHHHHHHHHHSE
T ss_pred HHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChHHhcCccHHHHHHHHHhcCC
Confidence 00000112334466778888888999999887776532 256788998888876
No 66
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.28 E-value=4.3e-11 Score=117.16 Aligned_cols=172 Identities=11% Similarity=0.042 Sum_probs=113.0
Q ss_pred cCCcEEEecCCCeeCCCCCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHH
Q 015035 72 DHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVA 151 (414)
Q Consensus 72 ~fgl~~~vp~gvLiPriP~R~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~A 151 (414)
+||.-+.++....++. +....|-+.+..+.... ...+.+|||||||+|.++..+++..+..+|+++|||+.+
T Consensus 48 ~~g~~L~ldg~~~~~~-~de~~Y~e~l~~~~l~~-------~~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~v 119 (294)
T 3adn_A 48 AFGRVMALDGVVQTTE-RDEFIYHEMMTHVPLLA-------HGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGV 119 (294)
T ss_dssp TTCCEEEETTEEEEET-TTHHHHHHHHHHHHHHH-------STTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTH
T ss_pred CcceEEEECCeEeecc-CchhHHHHHHHHHHHhc-------CCCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHH
Confidence 6888889988888887 44455656555432211 023579999999999999999886667899999999999
Q ss_pred HHHHHHHHHHCC--CC-CCcEEEEEccCCCCCCcccccccCCccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 015035 152 LEWAEKNVKSNP--HI-SELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHG 228 (414)
Q Consensus 152 l~~A~~N~~~n~--~l-~~rI~~~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (414)
++.|++|+...+ .+ ..+++++.+|..+
T Consensus 120 i~~ar~~~~~~~~~~~~~~rv~~~~~D~~~-------------------------------------------------- 149 (294)
T 3adn_A 120 VSFCRQYLPNHNAGSYDDPRFKLVIDDGVN-------------------------------------------------- 149 (294)
T ss_dssp HHHHHHHCHHHHSSCTTCTTCCEECSCSCC--------------------------------------------------
T ss_pred HHHHHHhhhhcccccccCCceEEEEChHHH--------------------------------------------------
Confidence 999999986531 01 2478888877532
Q ss_pred CCccccccCCCCcEEEEEECCCcccccccccCCCccccCCCCCcccccCChHHHHHHHHHHHHHhhccCcEEEEEeCC--
Q 015035 229 PPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGR-- 306 (414)
Q Consensus 229 ~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em~~~GGe~~Fv~rii~eS~~l~~~~~w~t~mvgk-- 306 (414)
++. ...++||+|++|+|--. .| . +..+...+++...+.++++|++.+..+.
T Consensus 150 --~l~---~~~~~fDvIi~D~~~p~-------~~-------~--------~~l~~~~f~~~~~~~LkpgG~lv~~~~s~~ 202 (294)
T 3adn_A 150 --FVN---QTSQTFDVIISDCTDPI-------GP-------G--------ESLFTSAFYEGCKRCLNPGGIFVAQNGVCF 202 (294)
T ss_dssp --------CCCCCEEEEEECC--------------------------------CCHHHHHHHHHTEEEEEEEEEEEEECS
T ss_pred --HHh---hcCCCccEEEECCCCcc-------Cc-------c--------hhccHHHHHHHHHHhcCCCCEEEEecCCcc
Confidence 111 12468999999986311 01 0 0112234555667789999998776542
Q ss_pred --cCCHHHHHHHHHHcCCceEEEEE
Q 015035 307 --KSNLKFLISKLRKVGVTIVKTTE 329 (414)
Q Consensus 307 --~~~l~~l~~~l~~~g~~~v~~~e 329 (414)
...+..+.+.+++. +..+....
T Consensus 203 ~~~~~~~~~~~~l~~~-F~~v~~~~ 226 (294)
T 3adn_A 203 LQQEEAIDSHRKLSHY-FSDVGFYQ 226 (294)
T ss_dssp SCCHHHHHHHHHHHHH-CSEEEEEE
T ss_pred cchHHHHHHHHHHHHH-CCCeEEEE
Confidence 23466777777776 55555443
No 67
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.28 E-value=2e-11 Score=124.29 Aligned_cols=131 Identities=15% Similarity=0.133 Sum_probs=90.4
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccc
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~~~p~~~~~~~~~~~~~~ 195 (414)
+.+|||+|||+|.+++.++.. +..|+|+|+|+.|++.|++|++.|+ +..+ +.+.|..+
T Consensus 215 g~~VLDlg~GtG~~sl~~a~~--ga~V~avDis~~al~~a~~n~~~ng-~~~~--~~~~D~~~----------------- 272 (393)
T 4dmg_A 215 GERVLDVYSYVGGFALRAARK--GAYALAVDKDLEALGVLDQAALRLG-LRVD--IRHGEALP----------------- 272 (393)
T ss_dssp TCEEEEESCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHT-CCCE--EEESCHHH-----------------
T ss_pred CCeEEEcccchhHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHHhC-CCCc--EEEccHHH-----------------
Confidence 468999999999999998874 5679999999999999999999996 7643 44555321
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccccccccCCCccccCCCCCcccc
Q 015035 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (414)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em~~ 275 (414)
++... .+.||+|+||||+|...... ..
T Consensus 273 -----------------------------------~l~~~---~~~fD~Ii~dpP~f~~~~~~----------~~----- 299 (393)
T 4dmg_A 273 -----------------------------------TLRGL---EGPFHHVLLDPPTLVKRPEE----------LP----- 299 (393)
T ss_dssp -----------------------------------HHHTC---CCCEEEEEECCCCCCSSGGG----------HH-----
T ss_pred -----------------------------------HHHHh---cCCCCEEEECCCcCCCCHHH----------HH-----
Confidence 11111 23399999999998643211 01
Q ss_pred cCChHHHHHHHHHHHHHhhccCcEEE-EEeCCcCCHHHHH----HHHHHcCCc
Q 015035 276 SGGERAFITRIIEDSVALKQTFRWYT-SMVGRKSNLKFLI----SKLRKVGVT 323 (414)
Q Consensus 276 ~GGe~~Fv~rii~eS~~l~~~~~w~t-~mvgk~~~l~~l~----~~l~~~g~~ 323 (414)
.....+.++++.+..+++++|++. +........+.+. +.+.+.|..
T Consensus 300 --~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~~~~~~f~~~v~~a~~~~g~~ 350 (393)
T 4dmg_A 300 --AMKRHLVDLVREALRLLAEEGFLWLSSCSYHLRLEDLLEVARRAAADLGRR 350 (393)
T ss_dssp --HHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHHTCC
T ss_pred --HHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHhCCe
Confidence 134567889999999999999875 4444343444433 444455543
No 68
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.27 E-value=1.6e-10 Score=106.54 Aligned_cols=59 Identities=22% Similarity=0.299 Sum_probs=52.0
Q ss_pred CCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
.+.+|||||||+|.++..++...++.+++|+|+|+.+++.|++++..++ +++++..|..
T Consensus 44 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~d~~ 102 (234)
T 3dtn_A 44 ENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNL----KVKYIEADYS 102 (234)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCT----TEEEEESCTT
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCC----CEEEEeCchh
Confidence 4479999999999999999998889999999999999999999987552 7899888753
No 69
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.27 E-value=1.3e-11 Score=115.17 Aligned_cols=131 Identities=10% Similarity=0.104 Sum_probs=93.6
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccc
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~~~p~~~~~~~~~~~~~~ 195 (414)
..+|||||||+|.+++.+|...|+.+|+|+|+++.+++.|++|++.++ +. +|.++.+|..+
T Consensus 35 ~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~-l~-nv~~~~~Da~~----------------- 95 (218)
T 3dxy_A 35 APVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEG-LS-NLRVMCHDAVE----------------- 95 (218)
T ss_dssp CCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTT-CS-SEEEECSCHHH-----------------
T ss_pred CCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhC-CC-cEEEEECCHHH-----------------
Confidence 468999999999999999999999999999999999999999999885 65 59998876321
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEEC--CCcccccccccCCCccccCCCCCcc
Q 015035 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN--PPFFESMEEAGLNPKTSCGGTPEEM 273 (414)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcN--PPy~~s~ee~~~~P~~a~~g~~~Em 273 (414)
++.... ++++||.|++| +||........+ +
T Consensus 96 -----------------------------------~l~~~~-~~~~~d~v~~~~~~p~~~~~~~~rr------------~ 127 (218)
T 3dxy_A 96 -----------------------------------VLHKMI-PDNSLRMVQLFFPDPWHKARHNKRR------------I 127 (218)
T ss_dssp -----------------------------------HHHHHS-CTTCEEEEEEESCCCCCSGGGGGGS------------S
T ss_pred -----------------------------------HHHHHc-CCCChheEEEeCCCCccchhhhhhh------------h
Confidence 111111 35689999999 787654221110 0
Q ss_pred cccCChHHHHHHHHHHHHHhhccCcEEEEEeCCcCCHHHHHHHHHHcC
Q 015035 274 VCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVG 321 (414)
Q Consensus 274 ~~~GGe~~Fv~rii~eS~~l~~~~~w~t~mvgk~~~l~~l~~~l~~~g 321 (414)
....++++...+++++|++.+...-..-...+...+...+
T Consensus 128 --------~~~~~l~~~~r~LkpGG~l~i~td~~~~~~~~~~~~~~~~ 167 (218)
T 3dxy_A 128 --------VQVPFAELVKSKLQLGGVFHMATDWEPYAEHMLEVMSSID 167 (218)
T ss_dssp --------CSHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHTST
T ss_pred --------hhHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHhCC
Confidence 0123556667788899987665553444566777776653
No 70
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.27 E-value=1.9e-10 Score=110.44 Aligned_cols=61 Identities=8% Similarity=0.162 Sum_probs=54.2
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
+.+|||||||+|.+.+.|++.. ++++|+|+|+|+.+++.|+++++..+ ...+|+++++|..
T Consensus 71 ~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~-~~~~v~~~~~D~~ 133 (261)
T 4gek_A 71 GTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYK-APTPVDVIEGDIR 133 (261)
T ss_dssp TCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSC-CSSCEEEEESCTT
T ss_pred CCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhc-cCceEEEeecccc
Confidence 4689999999999999998864 57899999999999999999999885 7789999998753
No 71
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.26 E-value=3.2e-11 Score=116.34 Aligned_cols=110 Identities=10% Similarity=-0.021 Sum_probs=61.3
Q ss_pred hCCCcccceeec---CCCCceeeCCChHhHHHHHHHHhhhcCCcEEEecCCCeeCCCCCcHhHHHHHHHHHccCCCCCCC
Q 015035 35 LYPSFEPFVFYS---RDGRPRIDWTDFNATRELTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTS 111 (414)
Q Consensus 35 ~yp~~~~~v~~~---~~g~~~iDf~~~~a~r~Lt~~LL~~~fgl~~~vp~gvLiPriP~R~~yi~~i~dll~~~~~~~~~ 111 (414)
..|.|..|+... ..|.+.+.-. . -..|||+.++ |.+...+.|+.+....
T Consensus 26 ~~~~~~~~~~~~g~~~~~~~~~~i~---------g--~~~~~g~~~~----------~~~~~l~~~l~~~~~~------- 77 (281)
T 3bzb_A 26 QRSRVERYQSPAGAPLQCSVQVQTT---------Q--EHPLWTSHVW----------SGARALADTLCWQPEL------- 77 (281)
T ss_dssp ---CEEEEECCSSCC-CCEEEEECC--------------------------------CHHHHHHHHHHHCGGG-------
T ss_pred HHHHHHHHHhhccccccCCeEEEEC---------C--CCCCCCceee----------cHHHHHHHHHHhcchh-------
Confidence 345677777654 3333333221 1 2567888766 3445555555543321
Q ss_pred CCCCCCeEEEECCcccHHHHHHHHHhcCCeeEEecC-cHHHHHHHHHHHHHCC----CCC----CcEEEEEcc
Q 015035 112 RNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDM-TDVALEWAEKNVKSNP----HIS----ELIEIRKVD 175 (414)
Q Consensus 112 ~~~~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDi-s~~Al~~A~~N~~~n~----~l~----~rI~~~~~d 175 (414)
....+|||||||+|++++.++.. ...+|+|+|+ |+.+++.|++|++.|. ++. ++|+++..+
T Consensus 78 --~~~~~vLDlG~G~G~~~~~~a~~-~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~ 147 (281)
T 3bzb_A 78 --IAGKTVCELGAGAGLVSIVAFLA-GADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYR 147 (281)
T ss_dssp --TTTCEEEETTCTTSHHHHHHHHT-TCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECC
T ss_pred --cCCCeEEEecccccHHHHHHHHc-CCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEec
Confidence 13458999999999999888764 3349999999 8999999999995441 133 356666554
No 72
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.26 E-value=2.7e-11 Score=122.04 Aligned_cols=134 Identities=15% Similarity=0.180 Sum_probs=93.6
Q ss_pred CeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCcccccc
Q 015035 117 VKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDES 196 (414)
Q Consensus 117 ~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~~~p~~~~~~~~~~~~~~~ 196 (414)
.+|||+|||+|.+++.++.. ..+|+|+|+|+.+++.|++|++.|+ +.+ ++++.+|..+
T Consensus 211 ~~VLDlg~G~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~n~~~n~-~~~-~~~~~~d~~~------------------ 268 (382)
T 1wxx_A 211 ERALDVFSYAGGFALHLALG--FREVVAVDSSAEALRRAEENARLNG-LGN-VRVLEANAFD------------------ 268 (382)
T ss_dssp EEEEEETCTTTHHHHHHHHH--EEEEEEEESCHHHHHHHHHHHHHTT-CTT-EEEEESCHHH------------------
T ss_pred CeEEEeeeccCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcC-CCC-ceEEECCHHH------------------
Confidence 58999999999999999876 5689999999999999999999996 765 8998887421
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccccccccCCCccccCCCCCccccc
Q 015035 197 NMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCS 276 (414)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em~~~ 276 (414)
++.......++||+|++|||++...... . .
T Consensus 269 ----------------------------------~~~~~~~~~~~fD~Ii~dpP~~~~~~~~------~----~------ 298 (382)
T 1wxx_A 269 ----------------------------------LLRRLEKEGERFDLVVLDPPAFAKGKKD------V----E------ 298 (382)
T ss_dssp ----------------------------------HHHHHHHTTCCEEEEEECCCCSCCSTTS------H----H------
T ss_pred ----------------------------------HHHHHHhcCCCeeEEEECCCCCCCChhH------H----H------
Confidence 1111111246899999999998643210 0 0
Q ss_pred CChHHHHHHHHHHHHHhhccCcEEEEEeCCcC-CH----HHHHHHHHHcCCc
Q 015035 277 GGERAFITRIIEDSVALKQTFRWYTSMVGRKS-NL----KFLISKLRKVGVT 323 (414)
Q Consensus 277 GGe~~Fv~rii~eS~~l~~~~~w~t~mvgk~~-~l----~~l~~~l~~~g~~ 323 (414)
....-+..++..+..+++++|++.+...... .. +.+.+.+.+.|..
T Consensus 299 -~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~ 349 (382)
T 1wxx_A 299 -RAYRAYKEVNLRAIKLLKEGGILATASCSHHMTEPLFYAMVAEAAQDAHRL 349 (382)
T ss_dssp -HHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHTTCC
T ss_pred -HHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHcCCe
Confidence 1345677888888889999987654433222 22 2333455566643
No 73
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.26 E-value=3.7e-11 Score=115.04 Aligned_cols=128 Identities=12% Similarity=0.093 Sum_probs=99.7
Q ss_pred CCCeEEEECCcccHHHHHHHHH-hcCCeeEEecCcHHHHHHHHHHHHHC-CCCCCcEEEEEccCCCCCCcccccccCCcc
Q 015035 115 DKVKGFDIGTGANCIYPLLGAS-LLGWSFVGSDMTDVALEWAEKNVKSN-PHISELIEIRKVDNSESTPSIQESLTGKSV 192 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~-~~~~~vvgvDis~~Al~~A~~N~~~n-~~l~~rI~~~~~d~~~~~p~~~~~~~~~~~ 192 (414)
...+|||+|||+|.++..++.. .++.+++|+|+++.+++.|++|++.+ + + ++++++..|..+
T Consensus 110 ~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g-~-~~v~~~~~d~~~-------------- 173 (275)
T 1yb2_A 110 PGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYD-I-GNVRTSRSDIAD-------------- 173 (275)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSC-C-TTEEEECSCTTT--------------
T ss_pred CcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCC-C-CcEEEEECchhc--------------
Confidence 3468999999999999999887 46789999999999999999999887 5 3 468888776421
Q ss_pred ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccccccccCCCccccCCCCCc
Q 015035 193 QDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEE 272 (414)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~E 272 (414)
.+ .+++||+|+||+|-.
T Consensus 174 -----------------------------------------~~--~~~~fD~Vi~~~~~~-------------------- 190 (275)
T 1yb2_A 174 -----------------------------------------FI--SDQMYDAVIADIPDP-------------------- 190 (275)
T ss_dssp -----------------------------------------CC--CSCCEEEEEECCSCG--------------------
T ss_pred -----------------------------------------cC--cCCCccEEEEcCcCH--------------------
Confidence 00 135799999988621
Q ss_pred ccccCChHHHHHHHHHHHHHhhccCcEEEEEeCCcCCHHHHHHHHHHcCCceEEEEEecC
Q 015035 273 MVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQ 332 (414)
Q Consensus 273 m~~~GGe~~Fv~rii~eS~~l~~~~~w~t~mvgk~~~l~~l~~~l~~~g~~~v~~~e~~q 332 (414)
..++++...+++++|++.+......+...+.+.|++.|+..+++.+...
T Consensus 191 -----------~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~ 239 (275)
T 1yb2_A 191 -----------WNHVQKIASMMKPGSVATFYLPNFDQSEKTVLSLSASGMHHLETVELMK 239 (275)
T ss_dssp -----------GGSHHHHHHTEEEEEEEEEEESSHHHHHHHHHHSGGGTEEEEEEEEEEE
T ss_pred -----------HHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCeEEEEEEEec
Confidence 0344556677888888877777566788899999999998888877653
No 74
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.25 E-value=1.5e-10 Score=108.00 Aligned_cols=128 Identities=13% Similarity=0.082 Sum_probs=99.0
Q ss_pred CCCeEEEECCcccHHHHHHHHH-hcCCeeEEecCcHHHHHHHHHHHHHC-CCCCCcEEEEEccCCCCCCcccccccCCcc
Q 015035 115 DKVKGFDIGTGANCIYPLLGAS-LLGWSFVGSDMTDVALEWAEKNVKSN-PHISELIEIRKVDNSESTPSIQESLTGKSV 192 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~-~~~~~vvgvDis~~Al~~A~~N~~~n-~~l~~rI~~~~~d~~~~~p~~~~~~~~~~~ 192 (414)
...+|||+|||+|.++..++.. .++.+++++|+++.+++.|++|++.+ + .++++++..|..+
T Consensus 96 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g--~~~v~~~~~d~~~-------------- 159 (258)
T 2pwy_A 96 PGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQ--VENVRFHLGKLEE-------------- 159 (258)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC--CCCEEEEESCGGG--------------
T ss_pred CCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC--CCCEEEEECchhh--------------
Confidence 3468999999999999999887 45789999999999999999999887 5 3578888876421
Q ss_pred ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccccccccCCCccccCCCCCc
Q 015035 193 QDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEE 272 (414)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~E 272 (414)
. .+ .+++||+|++|||-.
T Consensus 160 --------------------------------------~--~~--~~~~~D~v~~~~~~~-------------------- 177 (258)
T 2pwy_A 160 --------------------------------------A--EL--EEAAYDGVALDLMEP-------------------- 177 (258)
T ss_dssp --------------------------------------C--CC--CTTCEEEEEEESSCG--------------------
T ss_pred --------------------------------------c--CC--CCCCcCEEEECCcCH--------------------
Confidence 0 00 135799999988621
Q ss_pred ccccCChHHHHHHHHHHHHHhhccCcEEEEEeCCcCCHHHHHHHHHHcCCceEEEEEec
Q 015035 273 MVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFV 331 (414)
Q Consensus 273 m~~~GGe~~Fv~rii~eS~~l~~~~~w~t~mvgk~~~l~~l~~~l~~~g~~~v~~~e~~ 331 (414)
..++++...+++++|++.+......++..+.+.|++.|+..+++.+..
T Consensus 178 -----------~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~gf~~~~~~~~~ 225 (258)
T 2pwy_A 178 -----------WKVLEKAALALKPDRFLVAYLPNITQVLELVRAAEAHPFRLERVLEVG 225 (258)
T ss_dssp -----------GGGHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHTTTTEEEEEEEEEE
T ss_pred -----------HHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCceEEEEEee
Confidence 123455566788888887777766688899999999999888877753
No 75
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.25 E-value=5.5e-11 Score=118.52 Aligned_cols=98 Identities=10% Similarity=0.025 Sum_probs=75.3
Q ss_pred hhcCCcEEEecCCCeeCCCCCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcH
Q 015035 70 LHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTD 149 (414)
Q Consensus 70 ~~~fgl~~~vp~gvLiPriP~R~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~ 149 (414)
..+||..+.+...+++|+ +....|-+.+..+.... . ..+.+|||||||+|.++..|++..+..+|+++|+|+
T Consensus 83 ~~~~g~~l~ldg~~~~~~-~de~~y~e~L~~l~l~~-~------~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~ 154 (334)
T 1xj5_A 83 SATYGKVLVLDGVIQLTE-RDECAYQEMITHLPLCS-I------PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDK 154 (334)
T ss_dssp ESSSCEEEEETTEEEEET-TTHHHHHHHHHHHHHTT-S------SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCH
T ss_pred cCCCCeEEEECCEeecCc-CcchHHHHHHHHHHHhh-C------CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCH
Confidence 458999999999999997 33445655555442211 1 234699999999999999998876778999999999
Q ss_pred HHHHHHHHHHHHC--CCC-CCcEEEEEccC
Q 015035 150 VALEWAEKNVKSN--PHI-SELIEIRKVDN 176 (414)
Q Consensus 150 ~Al~~A~~N~~~n--~~l-~~rI~~~~~d~ 176 (414)
.+++.|++|+... + + ..+++++.+|.
T Consensus 155 ~~l~~Ar~~~~~~~~g-l~~~rv~~~~~D~ 183 (334)
T 1xj5_A 155 MVVDVSKQFFPDVAIG-YEDPRVNLVIGDG 183 (334)
T ss_dssp HHHHHHHHHCHHHHGG-GGSTTEEEEESCH
T ss_pred HHHHHHHHHHHhhccc-cCCCcEEEEECCH
Confidence 9999999998752 2 3 35799998874
No 76
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.25 E-value=1.7e-10 Score=105.04 Aligned_cols=131 Identities=17% Similarity=0.229 Sum_probs=98.6
Q ss_pred CCeEEEECCcccHHHHHHHHHh-cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCcccc
Q 015035 116 KVKGFDIGTGANCIYPLLGASL-LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~-~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~~~p~~~~~~~~~~~~~ 194 (414)
..+|||||||+|.++..++... +..+++|+|+|+.+++.|++++..++ +. +++++..|..+
T Consensus 38 ~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~-~~~~~~~d~~~---------------- 99 (219)
T 3dh0_A 38 GMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLG-LK-NVEVLKSEENK---------------- 99 (219)
T ss_dssp TCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHT-CT-TEEEEECBTTB----------------
T ss_pred CCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcC-CC-cEEEEeccccc----------------
Confidence 4699999999999999999886 67899999999999999999998885 54 79998887531
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccccccccCCCccccCCCCCccc
Q 015035 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMV 274 (414)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em~ 274 (414)
+ ...+++||+|+|+-.+..- .+
T Consensus 100 -------------------------------------~---~~~~~~fD~v~~~~~l~~~---------------~~--- 121 (219)
T 3dh0_A 100 -------------------------------------I---PLPDNTVDFIFMAFTFHEL---------------SE--- 121 (219)
T ss_dssp -------------------------------------C---SSCSSCEEEEEEESCGGGC---------------SS---
T ss_pred -------------------------------------C---CCCCCCeeEEEeehhhhhc---------------CC---
Confidence 0 0124689999998765421 11
Q ss_pred ccCChHHHHHHHHHHHHHhhccCcEEEEEe-C-----------CcCCHHHHHHHHHHcCCceEEEEEe
Q 015035 275 CSGGERAFITRIIEDSVALKQTFRWYTSMV-G-----------RKSNLKFLISKLRKVGVTIVKTTEF 330 (414)
Q Consensus 275 ~~GGe~~Fv~rii~eS~~l~~~~~w~t~mv-g-----------k~~~l~~l~~~l~~~g~~~v~~~e~ 330 (414)
...++++...+++++|++.+.. . ..-+...+.+.|++.|+..+++...
T Consensus 122 --------~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 181 (219)
T 3dh0_A 122 --------PLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGRVVEV 181 (219)
T ss_dssp --------HHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEEEEEE
T ss_pred --------HHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEEEEEee
Confidence 2455666677788888765432 1 1235789999999999998877654
No 77
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.24 E-value=2.6e-11 Score=122.43 Aligned_cols=115 Identities=17% Similarity=0.136 Sum_probs=84.9
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccc
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~~~p~~~~~~~~~~~~~~ 195 (414)
..+|||+|||+|.+++.++.. ...+|+|+|+++.+++.|++|++.|+ +.++++++..|..+
T Consensus 218 ~~~VLDl~~G~G~~~~~la~~-g~~~v~~vD~s~~~l~~a~~n~~~n~-~~~~v~~~~~d~~~----------------- 278 (396)
T 2as0_A 218 GDRVLDVFTYTGGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLNG-VEDRMKFIVGSAFE----------------- 278 (396)
T ss_dssp TCEEEETTCTTTHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTT-CGGGEEEEESCHHH-----------------
T ss_pred CCeEEEecCCCCHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcC-CCccceEEECCHHH-----------------
Confidence 468999999999999998874 33489999999999999999999996 87689999887421
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccccccccCCCccccCCCCCcccc
Q 015035 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (414)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em~~ 275 (414)
++.......++||+|++||||+...... . .
T Consensus 279 -----------------------------------~~~~~~~~~~~fD~Vi~dpP~~~~~~~~------~----~----- 308 (396)
T 2as0_A 279 -----------------------------------EMEKLQKKGEKFDIVVLDPPAFVQHEKD------L----K----- 308 (396)
T ss_dssp -----------------------------------HHHHHHHTTCCEEEEEECCCCSCSSGGG------H----H-----
T ss_pred -----------------------------------HHHHHHhhCCCCCEEEECCCCCCCCHHH------H----H-----
Confidence 1111111246899999999998642210 0 0
Q ss_pred cCChHHHHHHHHHHHHHhhccCcEEE
Q 015035 276 SGGERAFITRIIEDSVALKQTFRWYT 301 (414)
Q Consensus 276 ~GGe~~Fv~rii~eS~~l~~~~~w~t 301 (414)
....-+..++.++..+++++|++.
T Consensus 309 --~~~~~~~~~l~~~~~~LkpgG~lv 332 (396)
T 2as0_A 309 --AGLRAYFNVNFAGLNLVKDGGILV 332 (396)
T ss_dssp --HHHHHHHHHHHHHHTTEEEEEEEE
T ss_pred --HHHHHHHHHHHHHHHhcCCCcEEE
Confidence 023456778888888888988653
No 78
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.24 E-value=1.1e-10 Score=106.79 Aligned_cols=73 Identities=22% Similarity=0.222 Sum_probs=59.2
Q ss_pred HHHHHHHHHccCCCCCCCCCCCCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCC----cE
Q 015035 94 YIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISE----LI 169 (414)
Q Consensus 94 yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~----rI 169 (414)
...++.+++... ...+|||||||+|.+...++...+..+++|+|+|+.+++.|++++..++ +.+ ++
T Consensus 17 ~~~~l~~~l~~~---------~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~~~~~v 86 (219)
T 3jwg_A 17 RLGTVVAVLKSV---------NAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDR-LPEMQRKRI 86 (219)
T ss_dssp HHHHHHHHHHHT---------TCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGG-SCHHHHTTE
T ss_pred HHHHHHHHHhhc---------CCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhc-cccccCcce
Confidence 345555666531 3469999999999999999887777899999999999999999998774 654 79
Q ss_pred EEEEccC
Q 015035 170 EIRKVDN 176 (414)
Q Consensus 170 ~~~~~d~ 176 (414)
+++.+|.
T Consensus 87 ~~~~~d~ 93 (219)
T 3jwg_A 87 SLFQSSL 93 (219)
T ss_dssp EEEECCS
T ss_pred EEEeCcc
Confidence 9998874
No 79
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.22 E-value=8.5e-10 Score=100.22 Aligned_cols=137 Identities=11% Similarity=0.085 Sum_probs=96.0
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccc
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~~~p~~~~~~~~~~~~~~ 195 (414)
..+|||||||+|.++..++.. +.+++|+|+|+.+++.|++++ + +.++..|...
T Consensus 44 ~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~---~-----~~~~~~d~~~----------------- 96 (211)
T 3e23_A 44 GAKILELGCGAGYQAEAMLAA--GFDVDATDGSPELAAEASRRL---G-----RPVRTMLFHQ----------------- 96 (211)
T ss_dssp TCEEEESSCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHH---T-----SCCEECCGGG-----------------
T ss_pred CCcEEEECCCCCHHHHHHHHc--CCeEEEECCCHHHHHHHHHhc---C-----CceEEeeecc-----------------
Confidence 468999999999999888875 679999999999999999987 1 2344444210
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccccccccCCCccccCCCCCcccc
Q 015035 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (414)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em~~ 275 (414)
+ ...++||+|+|+..+....
T Consensus 97 ------------------------------------~----~~~~~fD~v~~~~~l~~~~-------------------- 116 (211)
T 3e23_A 97 ------------------------------------L----DAIDAYDAVWAHACLLHVP-------------------- 116 (211)
T ss_dssp ------------------------------------C----CCCSCEEEEEECSCGGGSC--------------------
T ss_pred ------------------------------------C----CCCCcEEEEEecCchhhcC--------------------
Confidence 0 1257899999998664321
Q ss_pred cCChHHHHHHHHHHHHHhhccCcEEEEEeCCc--------------CCHHHHHHHHHHcC-CceEEEEEe----cCCCee
Q 015035 276 SGGERAFITRIIEDSVALKQTFRWYTSMVGRK--------------SNLKFLISKLRKVG-VTIVKTTEF----VQGQTC 336 (414)
Q Consensus 276 ~GGe~~Fv~rii~eS~~l~~~~~w~t~mvgk~--------------~~l~~l~~~l~~~g-~~~v~~~e~----~qG~t~ 336 (414)
..-...++++...+++++|++.+.+... -+.+.+.+.|++.| ++.+.+.+. ..+...
T Consensus 117 ----~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~~~~~~~~~~~~~~ 192 (211)
T 3e23_A 117 ----RDELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASVAVESSEGKGFDQELA 192 (211)
T ss_dssp ----HHHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEEEEEEEEEECTTSCEE
T ss_pred ----HHHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEEEEEeccCCCCCCCCc
Confidence 0123456677777888888775554322 26899999999999 988777543 334445
Q ss_pred EEEEEEE
Q 015035 337 RWGLAWS 343 (414)
Q Consensus 337 Rw~lAWs 343 (414)
+|+.+..
T Consensus 193 ~wl~~~~ 199 (211)
T 3e23_A 193 QFLHVSV 199 (211)
T ss_dssp EEEEEEE
T ss_pred eEEEEEE
Confidence 6654443
No 80
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.22 E-value=1.2e-10 Score=106.43 Aligned_cols=75 Identities=13% Similarity=0.177 Sum_probs=60.8
Q ss_pred HhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCC----
Q 015035 92 SNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISE---- 167 (414)
Q Consensus 92 ~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~---- 167 (414)
.....++.+.+... ...+|||||||+|.++..++...+..+++|+|+|+.+++.|++++..++ +.+
T Consensus 15 ~~~~~~l~~~l~~~---------~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~~~~ 84 (217)
T 3jwh_A 15 QQRMNGVVAALKQS---------NARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLR-LPRNQWE 84 (217)
T ss_dssp HHHHHHHHHHHHHT---------TCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCC-CCHHHHT
T ss_pred HHHHHHHHHHHHhc---------CCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhc-CCcccCc
Confidence 34455666666531 3469999999999999999887777899999999999999999998875 654
Q ss_pred cEEEEEccC
Q 015035 168 LIEIRKVDN 176 (414)
Q Consensus 168 rI~~~~~d~ 176 (414)
++++++.|.
T Consensus 85 ~v~~~~~d~ 93 (217)
T 3jwh_A 85 RLQLIQGAL 93 (217)
T ss_dssp TEEEEECCT
T ss_pred ceEEEeCCc
Confidence 799998874
No 81
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.21 E-value=2.7e-10 Score=104.07 Aligned_cols=58 Identities=26% Similarity=0.355 Sum_probs=49.5
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCC----CCcEEEEEccC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHI----SELIEIRKVDN 176 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l----~~rI~~~~~d~ 176 (414)
..+|||||||+|.++..++.. +.+++|+|+++.+++.|++++..++ + .+++.++..|.
T Consensus 31 ~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~d~ 92 (235)
T 3sm3_A 31 DDEILDIGCGSGKISLELASK--GYSVTGIDINSEAIRLAETAARSPG-LNQKTGGKAEFKVENA 92 (235)
T ss_dssp TCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTTCCS-CCSSSSCEEEEEECCT
T ss_pred CCeEEEECCCCCHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcC-CccccCcceEEEEecc
Confidence 468999999999999988875 7799999999999999999998774 4 24688887764
No 82
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.21 E-value=1.3e-10 Score=114.40 Aligned_cols=148 Identities=11% Similarity=0.040 Sum_probs=99.2
Q ss_pred CCCeEEEECCcccHHHHHHHHHhc-CCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccc
Q 015035 115 DKVKGFDIGTGANCIYPLLGASLL-GWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQ 193 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~~-~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~~~p~~~~~~~~~~~~ 193 (414)
...+|||+|||+|..+..|+...+ ..+|+|+|+|+.+++.|++|+++++ +. +|++++.|...
T Consensus 118 ~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g-~~-~v~~~~~D~~~--------------- 180 (315)
T 1ixk_A 118 PGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLG-VL-NVILFHSSSLH--------------- 180 (315)
T ss_dssp TTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHT-CC-SEEEESSCGGG---------------
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhC-CC-eEEEEECChhh---------------
Confidence 346899999999999999998765 4799999999999999999999986 64 58887766321
Q ss_pred cccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccccccccCCCccccCCCCCcc
Q 015035 194 DESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEM 273 (414)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em 273 (414)
+.. ..++||+|+||||+.....- ...|.....-..+.+
T Consensus 181 --------------------------------------~~~---~~~~fD~Il~d~Pcsg~g~~-~~~p~~~~~~~~~~~ 218 (315)
T 1ixk_A 181 --------------------------------------IGE---LNVEFDKILLDAPCTGSGTI-HKNPERKWNRTMDDI 218 (315)
T ss_dssp --------------------------------------GGG---GCCCEEEEEEECCTTSTTTC-C--------CCHHHH
T ss_pred --------------------------------------ccc---ccccCCEEEEeCCCCCcccc-cCChhHhhcCCHHHH
Confidence 000 13579999999998643211 112221111111100
Q ss_pred cccCChHHHHHHHHHHHHHhhccCcEEEE---EeCCcCCHHHHHHHHHHcCCce
Q 015035 274 VCSGGERAFITRIIEDSVALKQTFRWYTS---MVGRKSNLKFLISKLRKVGVTI 324 (414)
Q Consensus 274 ~~~GGe~~Fv~rii~eS~~l~~~~~w~t~---mvgk~~~l~~l~~~l~~~g~~~ 324 (414)
. .-.....++++++..+++++|.+.. -+...++...+...|++.++..
T Consensus 219 -~--~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~~Ene~~v~~~l~~~~~~~ 269 (315)
T 1ixk_A 219 -K--FCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPEENEFVIQWALDNFDVEL 269 (315)
T ss_dssp -H--HHHHHHHHHHHHHHHHEEEEEEEEEEESCCCGGGTHHHHHHHHHHSSEEE
T ss_pred -H--HHHHHHHHHHHHHHHhCCCCCEEEEEeCCCChHHhHHHHHHHHhcCCCEE
Confidence 0 0133457888999899888887643 3555677777788888887643
No 83
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.20 E-value=4.9e-10 Score=121.84 Aligned_cols=79 Identities=19% Similarity=0.112 Sum_probs=60.4
Q ss_pred CCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCcccHHHHHHHHHh-------------------------------
Q 015035 89 PNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASL------------------------------- 137 (414)
Q Consensus 89 P~R~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~i~La~~~------------------------------- 137 (414)
|-++++...+..+... .....+||.+||||.|.+.+|...
T Consensus 173 pl~e~LAa~ll~~~~~---------~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~e 243 (703)
T 3v97_A 173 PIKETLAAAIVMRSGW---------QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAE 243 (703)
T ss_dssp SSCHHHHHHHHHHTTC---------CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHH
T ss_pred CCcHHHHHHHHHhhCC---------CCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHH
Confidence 5566655544444332 133579999999999998776532
Q ss_pred -----------cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 138 -----------LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 138 -----------~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
+..+++|+|+|+.|++.|+.|++.++ +.+.|++.+.|..
T Consensus 244 a~~~~~~~~~~~~~~i~G~Did~~av~~A~~N~~~ag-v~~~i~~~~~D~~ 293 (703)
T 3v97_A 244 AQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAG-IGELITFEVKDVA 293 (703)
T ss_dssp HHHHHHHHHHHCCCCEEEEESCHHHHHHHHHHHHHTT-CGGGEEEEECCGG
T ss_pred HHHHhhhccccCCccEEEEECCHHHHHHHHHHHHHcC-CCCceEEEECChh
Confidence 23589999999999999999999996 8888999998853
No 84
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.20 E-value=4.2e-10 Score=102.64 Aligned_cols=56 Identities=23% Similarity=0.230 Sum_probs=49.0
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
..+|||||||+|.++..++...+ +++|+|+|+.+++.|+++++.++ .+++++..|.
T Consensus 39 ~~~vLDlG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~~d~ 94 (227)
T 1ve3_A 39 RGKVLDLACGVGGFSFLLEDYGF--EVVGVDISEDMIRKAREYAKSRE---SNVEFIVGDA 94 (227)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT---CCCEEEECCT
T ss_pred CCeEEEEeccCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhcC---CCceEEECch
Confidence 46899999999999988887654 99999999999999999998874 5688888875
No 85
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.20 E-value=1.2e-10 Score=105.29 Aligned_cols=53 Identities=21% Similarity=0.043 Sum_probs=44.4
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
..+|||+|||+|.++..++.. +..+++|+|+|+.+++.|++|+. +++++++|.
T Consensus 52 ~~~vlD~gcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~-------~~~~~~~d~ 104 (200)
T 1ne2_A 52 GRSVIDAGTGNGILACGSYLL-GAESVTAFDIDPDAIETAKRNCG-------GVNFMVADV 104 (200)
T ss_dssp TSEEEEETCTTCHHHHHHHHT-TBSEEEEEESCHHHHHHHHHHCT-------TSEEEECCG
T ss_pred CCEEEEEeCCccHHHHHHHHc-CCCEEEEEECCHHHHHHHHHhcC-------CCEEEECcH
Confidence 468999999999999888875 33479999999999999999975 367777763
No 86
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.20 E-value=6e-10 Score=105.01 Aligned_cols=60 Identities=12% Similarity=0.148 Sum_probs=53.4
Q ss_pred CCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
...+|||||||+|.++..++... +.+++|+|+|+.+++.|++++..++ +.+++.++..|.
T Consensus 61 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~~~~~~~d~ 120 (273)
T 3bus_A 61 SGDRVLDVGCGIGKPAVRLATAR-DVRVTGISISRPQVNQANARATAAG-LANRVTFSYADA 120 (273)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHS-CCEEEEEESCHHHHHHHHHHHHHTT-CTTTEEEEECCT
T ss_pred CCCEEEEeCCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHhcC-CCcceEEEECcc
Confidence 34699999999999999888765 7899999999999999999999886 878899998875
No 87
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.19 E-value=5.5e-10 Score=102.72 Aligned_cols=72 Identities=15% Similarity=0.048 Sum_probs=55.3
Q ss_pred hHHHHHHHHHccCCCCCCCCCCCCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEE
Q 015035 93 NYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIR 172 (414)
Q Consensus 93 ~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~ 172 (414)
.+..++.+++.... ....+|||||||+|.++..++.. +.+++|+|+|+.+++.|++++..++ + ++.++
T Consensus 22 ~~~~~~~~~l~~~~-------~~~~~vLdiG~G~G~~~~~l~~~--~~~~~~~D~s~~~~~~a~~~~~~~~-~--~~~~~ 89 (246)
T 1y8c_A 22 KWSDFIIEKCVENN-------LVFDDYLDLACGTGNLTENLCPK--FKNTWAVDLSQEMLSEAENKFRSQG-L--KPRLA 89 (246)
T ss_dssp HHHHHHHHHHHTTT-------CCTTEEEEETCTTSTTHHHHGGG--SSEEEEECSCHHHHHHHHHHHHHTT-C--CCEEE
T ss_pred HHHHHHHHHHHHhC-------CCCCeEEEeCCCCCHHHHHHHHC--CCcEEEEECCHHHHHHHHHHHhhcC-C--CeEEE
Confidence 34555666665320 13469999999999999888765 6799999999999999999998875 4 67887
Q ss_pred EccC
Q 015035 173 KVDN 176 (414)
Q Consensus 173 ~~d~ 176 (414)
..|.
T Consensus 90 ~~d~ 93 (246)
T 1y8c_A 90 CQDI 93 (246)
T ss_dssp CCCG
T ss_pred eccc
Confidence 7653
No 88
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.19 E-value=5.6e-10 Score=107.58 Aligned_cols=60 Identities=13% Similarity=0.065 Sum_probs=53.6
Q ss_pred CCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
...+|||||||+|.++..++...+ .+|+|+|+|+.+++.|++++..++ +.++|+++..|.
T Consensus 72 ~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~-~~~~v~~~~~d~ 131 (302)
T 3hem_A 72 PGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEVD-SPRRKEVRIQGW 131 (302)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHSC-CSSCEEEEECCG
T ss_pred CcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcC-CCCceEEEECCH
Confidence 346999999999999999988765 799999999999999999999986 888999998874
No 89
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.19 E-value=3e-10 Score=111.17 Aligned_cols=175 Identities=10% Similarity=0.016 Sum_probs=111.1
Q ss_pred cCCcEEEecCCCeeCCCCCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHH
Q 015035 72 DHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVA 151 (414)
Q Consensus 72 ~fgl~~~vp~gvLiPriP~R~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~A 151 (414)
+||..+.+........ .....|-+.+..+.... . ..+.+|||||||+|.++..+++..+..+++++|+|+.+
T Consensus 60 ~~g~~l~ldg~~~~~~-~de~~y~e~l~~~~l~~-~------~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~ 131 (304)
T 3bwc_A 60 PWGTVMALDGCIQVTD-YDEFVYHEVLGHTSLCS-H------PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEV 131 (304)
T ss_dssp SCCEEEEETTEEEEET-TTHHHHHHHHHHHHHTT-S------SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHH
T ss_pred ccceEEEECCeeeeec-ccchHHHHHHhhhhhhc-C------CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHH
Confidence 5677777765444433 12223444444332211 1 23469999999999999998876567799999999999
Q ss_pred HHHHHHHHHH--CCCCCCcEEEEEccCCCCCCcccccccCCccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 015035 152 LEWAEKNVKS--NPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGP 229 (414)
Q Consensus 152 l~~A~~N~~~--n~~l~~rI~~~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (414)
++.|++++.. .+....+++++.+|..+
T Consensus 132 i~~a~~~~~~~~~~~~~~~v~~~~~D~~~--------------------------------------------------- 160 (304)
T 3bwc_A 132 MEQSKQHFPQISRSLADPRATVRVGDGLA--------------------------------------------------- 160 (304)
T ss_dssp HHHHHHHCHHHHGGGGCTTEEEEESCHHH---------------------------------------------------
T ss_pred HHHHHHHhHHhhcccCCCcEEEEECcHHH---------------------------------------------------
Confidence 9999998742 11123579998887421
Q ss_pred CccccccCCCCcEEEEEECCCcccccccccCCCccccCCCCCcccccCChHHHHHHHHHHHHHhhccCcEEEEEeCCc--
Q 015035 230 PVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRK-- 307 (414)
Q Consensus 230 ~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em~~~GGe~~Fv~rii~eS~~l~~~~~w~t~mvgk~-- 307 (414)
++.. ..+++||+|+||+|+... | .. ..+-..++++..+.++++|++.+..+..
T Consensus 161 -~~~~--~~~~~fDvIi~d~~~~~~-------~-------~~--------~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~ 215 (304)
T 3bwc_A 161 -FVRQ--TPDNTYDVVIIDTTDPAG-------P-------AS--------KLFGEAFYKDVLRILKPDGICCNQGESIWL 215 (304)
T ss_dssp -HHHS--SCTTCEEEEEEECC-------------------------------CCHHHHHHHHHHEEEEEEEEEEECCTTT
T ss_pred -HHHh--ccCCceeEEEECCCCccc-------c-------ch--------hhhHHHHHHHHHHhcCCCcEEEEecCCccc
Confidence 0100 024689999999876321 1 00 0011344556677889999987766533
Q ss_pred --CCHHHHHHHHHHcCCceEEEEEe
Q 015035 308 --SNLKFLISKLRKVGVTIVKTTEF 330 (414)
Q Consensus 308 --~~l~~l~~~l~~~g~~~v~~~e~ 330 (414)
.....+.+.|++.||..+++...
T Consensus 216 ~~~~~~~~~~~l~~~GF~~v~~~~~ 240 (304)
T 3bwc_A 216 DLELIEKMSRFIRETGFASVQYALM 240 (304)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEEEC
T ss_pred chHHHHHHHHHHHhCCCCcEEEEEe
Confidence 25678889999999988777654
No 90
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.18 E-value=1.5e-10 Score=107.11 Aligned_cols=131 Identities=18% Similarity=0.135 Sum_probs=96.1
Q ss_pred CeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCcccccc
Q 015035 117 VKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDES 196 (414)
Q Consensus 117 ~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~~~p~~~~~~~~~~~~~~~ 196 (414)
.+|||||||+|.++..|+. ++.+++|+|+|+.+++.|++++...+ ...+++++..|..+
T Consensus 68 ~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~------------------ 126 (235)
T 3lcc_A 68 GRALVPGCGGGHDVVAMAS--PERFVVGLDISESALAKANETYGSSP-KAEYFSFVKEDVFT------------------ 126 (235)
T ss_dssp EEEEEETCTTCHHHHHHCB--TTEEEEEECSCHHHHHHHHHHHTTSG-GGGGEEEECCCTTT------------------
T ss_pred CCEEEeCCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHHHHhhccC-CCcceEEEECchhc------------------
Confidence 5999999999999988865 67799999999999999999998764 56789998887532
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccccccccCCCccccCCCCCccccc
Q 015035 197 NMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCS 276 (414)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em~~~ 276 (414)
+ ...++||+|+|+..+..-. .
T Consensus 127 -----------------------------------~----~~~~~fD~v~~~~~l~~~~--------------~------ 147 (235)
T 3lcc_A 127 -----------------------------------W----RPTELFDLIFDYVFFCAIE--------------P------ 147 (235)
T ss_dssp -----------------------------------C----CCSSCEEEEEEESSTTTSC--------------G------
T ss_pred -----------------------------------C----CCCCCeeEEEEChhhhcCC--------------H------
Confidence 0 0135899999987664211 0
Q ss_pred CChHHHHHHHHHHHHHhhccCcEEEEEeCCc----------CCHHHHHHHHHHcCCceEEEEEec
Q 015035 277 GGERAFITRIIEDSVALKQTFRWYTSMVGRK----------SNLKFLISKLRKVGVTIVKTTEFV 331 (414)
Q Consensus 277 GGe~~Fv~rii~eS~~l~~~~~w~t~mvgk~----------~~l~~l~~~l~~~g~~~v~~~e~~ 331 (414)
.-...++++...+++++|++.+..-.. -+...+.+.|++.|+..+.+....
T Consensus 148 ----~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 208 (235)
T 3lcc_A 148 ----EMRPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFKAVSVEENP 208 (235)
T ss_dssp ----GGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEEEEEEEECT
T ss_pred ----HHHHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCCeEEEEEecC
Confidence 013455666677788888765432211 246899999999999877776543
No 91
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.18 E-value=3.8e-10 Score=107.56 Aligned_cols=58 Identities=14% Similarity=0.263 Sum_probs=51.4
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
+.+|||||||+|.++..++.. +.+++|+|+|+.+++.|+++++.++ +..+++++..|.
T Consensus 69 ~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~v~~~~~d~ 126 (285)
T 4htf_A 69 KLRVLDAGGGEGQTAIKMAER--GHQVILCDLSAQMIDRAKQAAEAKG-VSDNMQFIHCAA 126 (285)
T ss_dssp CCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHC-C-CGGGEEEEESCG
T ss_pred CCEEEEeCCcchHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcC-CCcceEEEEcCH
Confidence 469999999999999988875 7799999999999999999999885 778899998874
No 92
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.18 E-value=2.9e-10 Score=109.01 Aligned_cols=59 Identities=24% Similarity=0.193 Sum_probs=52.1
Q ss_pred CCCeEEEECCcccHHHHHHHHHhc-CCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 115 DKVKGFDIGTGANCIYPLLGASLL-GWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~~-~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
.+.+|||||||+|..+..++..++ +.+++|+|+|+.+++.|++++...+ . +++++..|.
T Consensus 22 ~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~-~--~v~~~~~d~ 81 (284)
T 3gu3_A 22 KPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLP-Y--DSEFLEGDA 81 (284)
T ss_dssp SCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSS-S--EEEEEESCT
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcC-C--ceEEEEcch
Confidence 457999999999999999998887 4899999999999999999998775 3 789988875
No 93
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.18 E-value=1.5e-10 Score=112.88 Aligned_cols=171 Identities=13% Similarity=0.075 Sum_probs=108.9
Q ss_pred cCCcEEEecCCCeeCCCCCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHH
Q 015035 72 DHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVA 151 (414)
Q Consensus 72 ~fgl~~~vp~gvLiPriP~R~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~A 151 (414)
.||..+.++..+.+++ +....|-+.+..+.... . ..+.+|||||||+|.++..+++..+..+++++|+|+.+
T Consensus 55 ~~g~~l~ldg~~~~~~-~de~~y~e~l~~~~l~~-~------~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~ 126 (296)
T 1inl_A 55 DLGVVFALDGITMTTE-KDEFMYHEMLAHVPMFL-H------PNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLV 126 (296)
T ss_dssp TTEEEEEETTEEEEET-TTHHHHHHHHHHHHHHH-S------SSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHH
T ss_pred CCcEEEEECCEEeecc-cchhHHHHHHhHHHHhc-C------CCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHH
Confidence 4788888886666665 22233544444331110 0 13469999999999999998876667899999999999
Q ss_pred HHHHHHHHHH--CCCC-CCcEEEEEccCCCCCCcccccccCCccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 015035 152 LEWAEKNVKS--NPHI-SELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHG 228 (414)
Q Consensus 152 l~~A~~N~~~--n~~l-~~rI~~~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (414)
++.|++|+.. ++ + ..+++++.+|..+
T Consensus 127 ~~~a~~~~~~~~~~-~~~~~v~~~~~D~~~-------------------------------------------------- 155 (296)
T 1inl_A 127 IEAARKYLKQTSCG-FDDPRAEIVIANGAE-------------------------------------------------- 155 (296)
T ss_dssp HHHHHHHCHHHHGG-GGCTTEEEEESCHHH--------------------------------------------------
T ss_pred HHHHHHHhHhhccc-cCCCceEEEECcHHH--------------------------------------------------
Confidence 9999999864 32 3 3589999887421
Q ss_pred CCccccccCCCCcEEEEEECCCcccccccccCCCccccCCCCCcccccCChHHHHHHHHHHHHHhhccCcEEEEEeCCc-
Q 015035 229 PPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRK- 307 (414)
Q Consensus 229 ~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em~~~GGe~~Fv~rii~eS~~l~~~~~w~t~mvgk~- 307 (414)
.+. ...++||+|++|||... ..|. . ..+...++++...+++++|++.+..+..
T Consensus 156 --~l~---~~~~~fD~Ii~d~~~~~------~~~~-------~--------~l~~~~~l~~~~~~LkpgG~lv~~~~~~~ 209 (296)
T 1inl_A 156 --YVR---KFKNEFDVIIIDSTDPT------AGQG-------G--------HLFTEEFYQACYDALKEDGVFSAETEDPF 209 (296)
T ss_dssp --HGG---GCSSCEEEEEEEC-------------------------------CCSHHHHHHHHHHEEEEEEEEEECCCTT
T ss_pred --HHh---hCCCCceEEEEcCCCcc------cCch-------h--------hhhHHHHHHHHHHhcCCCcEEEEEccCcc
Confidence 011 12467999999987410 0111 0 0123455566678899999988776532
Q ss_pred ---CCHHHHHHHHHHcCCceEEEE
Q 015035 308 ---SNLKFLISKLRKVGVTIVKTT 328 (414)
Q Consensus 308 ---~~l~~l~~~l~~~g~~~v~~~ 328 (414)
.....+.+.|++. +..+...
T Consensus 210 ~~~~~~~~~~~~l~~~-F~~v~~~ 232 (296)
T 1inl_A 210 YDIGWFKLAYRRISKV-FPITRVY 232 (296)
T ss_dssp TTHHHHHHHHHHHHHH-CSEEEEE
T ss_pred cCHHHHHHHHHHHHHH-CCceEEE
Confidence 2356667777776 5555543
No 94
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.18 E-value=3.5e-10 Score=107.02 Aligned_cols=60 Identities=18% Similarity=0.201 Sum_probs=53.3
Q ss_pred CCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
...+|||||||+|.+...++...|+.+++|+|+++.+++.|++++..++ +. +++++..|.
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~-~~~~~~~d~ 96 (276)
T 3mgg_A 37 PGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNG-IK-NVKFLQANI 96 (276)
T ss_dssp TTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTT-CC-SEEEEECCG
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC-CC-CcEEEEccc
Confidence 3469999999999999999998888999999999999999999999885 53 688888764
No 95
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.17 E-value=1.5e-10 Score=111.31 Aligned_cols=145 Identities=12% Similarity=0.028 Sum_probs=94.8
Q ss_pred CCCeEEEECCcccHHHHHHHHHhcC-CeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccc
Q 015035 115 DKVKGFDIGTGANCIYPLLGASLLG-WSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQ 193 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~~~-~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~~~p~~~~~~~~~~~~ 193 (414)
...+|||+|||+|..+..|+...++ .+|+|+|+++.+++.|++|+++++ +. ++++++.|...
T Consensus 83 ~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g-~~-~v~~~~~D~~~--------------- 145 (274)
T 3ajd_A 83 EDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMG-VL-NTIIINADMRK--------------- 145 (274)
T ss_dssp TTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTT-CC-SEEEEESCHHH---------------
T ss_pred CcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhC-CC-cEEEEeCChHh---------------
Confidence 3468999999999999999987776 799999999999999999999986 64 78998877321
Q ss_pred cccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccccccccCCCccccCCCCCcc
Q 015035 194 DESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEM 273 (414)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em 273 (414)
+........++||+|+|||||.....- ...|... .+ -
T Consensus 146 -------------------------------------~~~~~~~~~~~fD~Vl~d~Pcs~~g~~-~~~p~~~----~~-~ 182 (274)
T 3ajd_A 146 -------------------------------------YKDYLLKNEIFFDKILLDAPCSGNIIK-DKNRNVS----EE-D 182 (274)
T ss_dssp -------------------------------------HHHHHHHTTCCEEEEEEEECCC-----------------HH-H
T ss_pred -------------------------------------cchhhhhccccCCEEEEcCCCCCCccc-ccCCCCC----HH-H
Confidence 000000014579999999999753221 1123110 00 0
Q ss_pred cccCChHHHHHHHHHHHHHhhccCcEEEEE---eCCcCCHHHHHHHHHHcC
Q 015035 274 VCSGGERAFITRIIEDSVALKQTFRWYTSM---VGRKSNLKFLISKLRKVG 321 (414)
Q Consensus 274 ~~~GGe~~Fv~rii~eS~~l~~~~~w~t~m---vgk~~~l~~l~~~l~~~g 321 (414)
+. .-.....++++.+..+++++|.+... +...++...+...|+++.
T Consensus 183 ~~--~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~~~ene~~v~~~l~~~~ 231 (274)
T 3ajd_A 183 IK--YCSLRQKELIDIGIDLLKKDGELVYSTCSMEVEENEEVIKYILQKRN 231 (274)
T ss_dssp HT--GGGTCHHHHHHHHHHHEEEEEEEEEEESCCCTTSSHHHHHHHHHHCS
T ss_pred HH--HHHHHHHHHHHHHHHhCCCCCEEEEEECCCChHHhHHHHHHHHHhCC
Confidence 00 01234577888888888888876432 444567666777776653
No 96
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.17 E-value=1.6e-10 Score=120.13 Aligned_cols=145 Identities=10% Similarity=0.028 Sum_probs=101.9
Q ss_pred CCCeEEEECCcccHHHHHHHHHhcC-CeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccc
Q 015035 115 DKVKGFDIGTGANCIYPLLGASLLG-WSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQ 193 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~~~-~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~~~p~~~~~~~~~~~~ 193 (414)
.+.+|||+|||+|.+++.||...++ .+|+|+|+|+.+++.|++|+++++ +. |.+++.|..+
T Consensus 101 ~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G-~~--v~~~~~Da~~--------------- 162 (464)
T 3m6w_A 101 PGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWG-AP--LAVTQAPPRA--------------- 162 (464)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHC-CC--CEEECSCHHH---------------
T ss_pred CCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC-Ce--EEEEECCHHH---------------
Confidence 3468999999999999999988764 699999999999999999999996 65 8887766321
Q ss_pred cccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccccccccCCCccccCCCCCcc
Q 015035 194 DESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEM 273 (414)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em 273 (414)
+... ..++||.|++|||+.....- ...|.....-+.+.+
T Consensus 163 --------------------------------------l~~~--~~~~FD~Il~D~PcSg~G~~-rr~pd~~~~~~~~~~ 201 (464)
T 3m6w_A 163 --------------------------------------LAEA--FGTYFHRVLLDAPCSGEGMF-RKDREAARHWGPSAP 201 (464)
T ss_dssp --------------------------------------HHHH--HCSCEEEEEEECCCCCGGGT-TTCTTSGGGCCTTHH
T ss_pred --------------------------------------hhhh--ccccCCEEEECCCcCCcccc-ccChHHhhhcCHHHH
Confidence 1100 14689999999999654321 223443322222211
Q ss_pred cccCChHHHHHHHHHHHHHhhccCcEEE---EEeCCcCCHHHHHHHHHHcC
Q 015035 274 VCSGGERAFITRIIEDSVALKQTFRWYT---SMVGRKSNLKFLISKLRKVG 321 (414)
Q Consensus 274 ~~~GGe~~Fv~rii~eS~~l~~~~~w~t---~mvgk~~~l~~l~~~l~~~g 321 (414)
. .-.....+|++++..+++++|.+. +-+...++-..+...|++++
T Consensus 202 ~---~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~~eEne~vv~~~l~~~~ 249 (464)
T 3m6w_A 202 K---RMAEVQKALLAQASRLLGPGGVLVYSTCTFAPEENEGVVAHFLKAHP 249 (464)
T ss_dssp H---HHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTHHHHHHHHHHCT
T ss_pred H---HHHHHHHHHHHHHHHhcCCCcEEEEEeccCchhcCHHHHHHHHHHCC
Confidence 0 012345789999999999888753 34565678888888888873
No 97
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.17 E-value=1.5e-11 Score=128.08 Aligned_cols=93 Identities=14% Similarity=0.044 Sum_probs=69.2
Q ss_pred hcCCcEEEecCCCeeCCCCCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHH
Q 015035 71 HDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDV 150 (414)
Q Consensus 71 ~~fgl~~~vp~gvLiPriP~R~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~ 150 (414)
++|+..+. .++.|+|+ +.+..|...+.+.+.. ....+|||||||+|.+++.++. .+..+|+|+|+++
T Consensus 125 ~~y~~~~~-~~~~L~d~-~~t~~~~~~il~~l~~---------~~~~~VLDiGcGtG~la~~la~-~~~~~V~gvD~s~- 191 (480)
T 3b3j_A 125 QFYGYLSQ-QQNMMQDY-VRTGTYQRAILQNHTD---------FKDKIVLDVGCGSGILSFFAAQ-AGARKIYAVEAST- 191 (480)
T ss_dssp EGGGCSCH-HHHHHHHH-HHHHHHHHHHHHTGGG---------TTTCEEEEESCSTTHHHHHHHH-TTCSEEEEEECHH-
T ss_pred HHHhhhcc-chhhhcCh-HhHHHHHHHHHHhhhh---------cCCCEEEEecCcccHHHHHHHH-cCCCEEEEEEcHH-
Confidence 45555443 55677876 3345555555444332 1346899999999999988876 5667999999999
Q ss_pred HHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 151 ALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 151 Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
+++.|++|++.++ +.++|+++++|..
T Consensus 192 ~l~~A~~~~~~~g-l~~~v~~~~~d~~ 217 (480)
T 3b3j_A 192 MAQHAEVLVKSNN-LTDRIVVIPGKVE 217 (480)
T ss_dssp HHHHHHHHHHHTT-CTTTEEEEESCTT
T ss_pred HHHHHHHHHHHcC-CCCcEEEEECchh
Confidence 9999999999996 8889999998753
No 98
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.17 E-value=3.9e-10 Score=108.54 Aligned_cols=58 Identities=14% Similarity=0.201 Sum_probs=50.2
Q ss_pred CeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCC--CcEEEEEccCC
Q 015035 117 VKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHIS--ELIEIRKVDNS 177 (414)
Q Consensus 117 ~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~--~rI~~~~~d~~ 177 (414)
.+|||||||+|.++..|+.. +.+|+|+|+|+.+++.|++++..++ +. .+|++++.|..
T Consensus 84 ~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~~~v~~~~~d~~ 143 (299)
T 3g2m_A 84 GPVLELAAGMGRLTFPFLDL--GWEVTALELSTSVLAAFRKRLAEAP-ADVRDRCTLVQGDMS 143 (299)
T ss_dssp SCEEEETCTTTTTHHHHHTT--TCCEEEEESCHHHHHHHHHHHHTSC-HHHHTTEEEEECBTT
T ss_pred CcEEEEeccCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHhhcc-cccccceEEEeCchh
Confidence 48999999999999988875 6799999999999999999998764 32 67999998853
No 99
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.16 E-value=2.6e-10 Score=105.56 Aligned_cols=117 Identities=18% Similarity=0.235 Sum_probs=84.7
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccc
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~~~p~~~~~~~~~~~~~~ 195 (414)
..+|||||||+|.++..++.. +.+|+|+|+|+.+++.|++| . .++++++.|..+.
T Consensus 49 ~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~---~----~~~~~~~~d~~~~---------------- 103 (226)
T 3m33_A 49 QTRVLEAGCGHGPDAARFGPQ--AARWAAYDFSPELLKLARAN---A----PHADVYEWNGKGE---------------- 103 (226)
T ss_dssp TCEEEEESCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHH---C----TTSEEEECCSCSS----------------
T ss_pred CCeEEEeCCCCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHh---C----CCceEEEcchhhc----------------
Confidence 468999999999999888875 67999999999999999998 2 2478888875210
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccccccccCCCccccCCCCCcccc
Q 015035 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (414)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em~~ 275 (414)
+ +. ..+++||+|+||+. +.
T Consensus 104 ------------------------------------~-~~-~~~~~fD~v~~~~~-----------~~------------ 122 (226)
T 3m33_A 104 ------------------------------------L-PA-GLGAPFGLIVSRRG-----------PT------------ 122 (226)
T ss_dssp ------------------------------------C-CT-TCCCCEEEEEEESC-----------CS------------
T ss_pred ------------------------------------c-CC-cCCCCEEEEEeCCC-----------HH------------
Confidence 0 00 11468999999931 10
Q ss_pred cCChHHHHHHHHHHHHHhhccCcEEEEEeCCcCCHHHHHHHHHHcCCceEEEE
Q 015035 276 SGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTT 328 (414)
Q Consensus 276 ~GGe~~Fv~rii~eS~~l~~~~~w~t~mvgk~~~l~~l~~~l~~~g~~~v~~~ 328 (414)
.++++...+++++|++. ..+...+...+.+.|++.|+..+.+.
T Consensus 123 ---------~~l~~~~~~LkpgG~l~-~~~~~~~~~~~~~~l~~~Gf~~~~~~ 165 (226)
T 3m33_A 123 ---------SVILRLPELAAPDAHFL-YVGPRLNVPEVPERLAAVGWDIVAED 165 (226)
T ss_dssp ---------GGGGGHHHHEEEEEEEE-EEESSSCCTHHHHHHHHTTCEEEEEE
T ss_pred ---------HHHHHHHHHcCCCcEEE-EeCCcCCHHHHHHHHHHCCCeEEEEE
Confidence 11233445677788775 45557788899999999999866554
No 100
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.16 E-value=5.1e-10 Score=108.68 Aligned_cols=61 Identities=11% Similarity=0.177 Sum_probs=54.4
Q ss_pred CCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
...+|||||||+|.++..|+.+. +.+|+|+|+++.+++.|++|++.++ +.++++++.+|..
T Consensus 117 ~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~v~~~~~d~~ 177 (312)
T 3vc1_A 117 PDDTLVDAGCGRGGSMVMAHRRF-GSRVEGVTLSAAQADFGNRRARELR-IDDHVRSRVCNML 177 (312)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHTT-CTTTEEEEECCTT
T ss_pred CCCEEEEecCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcC-CCCceEEEECChh
Confidence 34699999999999999988765 6899999999999999999999996 8889999998753
No 101
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.16 E-value=5.5e-10 Score=103.68 Aligned_cols=57 Identities=9% Similarity=-0.078 Sum_probs=49.4
Q ss_pred CCeEEEECCcccHHHHHHHHHh-cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL-LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~-~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
..+|||+|||+|.++..|+... ++.+|+|+|+++.+++.+.++++.+ .+++++.+|.
T Consensus 78 ~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~----~~v~~~~~d~ 135 (233)
T 2ipx_A 78 GAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR----TNIIPVIEDA 135 (233)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC----TTEEEECSCT
T ss_pred CCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc----CCeEEEEccc
Confidence 4689999999999999999876 5689999999999999999998876 2588887774
No 102
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.16 E-value=3.7e-10 Score=107.22 Aligned_cols=129 Identities=13% Similarity=0.082 Sum_probs=97.9
Q ss_pred CCeEEEECCcccHHHHHHHHHh-cCCeeEEecCcHHHHHHHHHHHHHC-CCCCCcEEEEEccCCCCCCcccccccCCccc
Q 015035 116 KVKGFDIGTGANCIYPLLGASL-LGWSFVGSDMTDVALEWAEKNVKSN-PHISELIEIRKVDNSESTPSIQESLTGKSVQ 193 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~-~~~~vvgvDis~~Al~~A~~N~~~n-~~l~~rI~~~~~d~~~~~p~~~~~~~~~~~~ 193 (414)
..+|||+|||+|.++..++... ++.+++++|+++.+++.|++|++.+ +.+.+++++++.|..+
T Consensus 100 ~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~--------------- 164 (280)
T 1i9g_A 100 GARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLAD--------------- 164 (280)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGG---------------
T ss_pred CCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHh---------------
Confidence 4689999999999999998864 5789999999999999999999876 3245678888776421
Q ss_pred cccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccccccccCCCccccCCCCCcc
Q 015035 194 DESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEM 273 (414)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em 273 (414)
. ...+++||+|++|+|- |.
T Consensus 165 ----------------------------------------~-~~~~~~~D~v~~~~~~----------~~---------- 183 (280)
T 1i9g_A 165 ----------------------------------------S-ELPDGSVDRAVLDMLA----------PW---------- 183 (280)
T ss_dssp ----------------------------------------C-CCCTTCEEEEEEESSC----------GG----------
T ss_pred ----------------------------------------c-CCCCCceeEEEECCcC----------HH----------
Confidence 0 0024579999998861 10
Q ss_pred cccCChHHHHHHHHHHHHHhhccCcEEEEEeCCcCCHHHHHHHHHH-cCCceEEEEEec
Q 015035 274 VCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRK-VGVTIVKTTEFV 331 (414)
Q Consensus 274 ~~~GGe~~Fv~rii~eS~~l~~~~~w~t~mvgk~~~l~~l~~~l~~-~g~~~v~~~e~~ 331 (414)
.++++...+++++|++.+.+....++..+...|++ .++..+++.+..
T Consensus 184 -----------~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~~~~f~~~~~~~~~ 231 (280)
T 1i9g_A 184 -----------EVLDAVSRLLVAGGVLMVYVATVTQLSRIVEALRAKQCWTEPRAWETL 231 (280)
T ss_dssp -----------GGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHHSSBCCCEEECCC
T ss_pred -----------HHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhcCCcCCcEEEEEe
Confidence 23456667788889888877767788888888888 788777776654
No 103
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.16 E-value=8.1e-10 Score=97.62 Aligned_cols=127 Identities=15% Similarity=0.124 Sum_probs=92.3
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccc
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~~~p~~~~~~~~~~~~~~ 195 (414)
..+|||||||+|.+...++.. +.+++|+|+++.+++.|+++.. ++.++..|..+
T Consensus 47 ~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~~~~~~~~a~~~~~-------~~~~~~~d~~~----------------- 100 (195)
T 3cgg_A 47 GAKILDAGCGQGRIGGYLSKQ--GHDVLGTDLDPILIDYAKQDFP-------EARWVVGDLSV----------------- 100 (195)
T ss_dssp TCEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHCT-------TSEEEECCTTT-----------------
T ss_pred CCeEEEECCCCCHHHHHHHHC--CCcEEEEcCCHHHHHHHHHhCC-------CCcEEEccccc-----------------
Confidence 468999999999999888875 6799999999999999998762 26777776421
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccccccccCCCccccCCCCCcccc
Q 015035 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (414)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em~~ 275 (414)
+ . ...++||+|+|||+.+.....
T Consensus 101 -----------------------------------~--~--~~~~~~D~i~~~~~~~~~~~~------------------ 123 (195)
T 3cgg_A 101 -----------------------------------D--Q--ISETDFDLIVSAGNVMGFLAE------------------ 123 (195)
T ss_dssp -----------------------------------S--C--CCCCCEEEEEECCCCGGGSCH------------------
T ss_pred -----------------------------------C--C--CCCCceeEEEECCcHHhhcCh------------------
Confidence 0 0 024689999999877643210
Q ss_pred cCChHHHHHHHHHHHHHhhccCcEEEEEeCCc--CCHHHHHHHHHHcCCceEEEEEe
Q 015035 276 SGGERAFITRIIEDSVALKQTFRWYTSMVGRK--SNLKFLISKLRKVGVTIVKTTEF 330 (414)
Q Consensus 276 ~GGe~~Fv~rii~eS~~l~~~~~w~t~mvgk~--~~l~~l~~~l~~~g~~~v~~~e~ 330 (414)
.-...++++...+++++|.+.+..+.. .....+.+.+++.|+..+++...
T Consensus 124 -----~~~~~~l~~~~~~l~~~G~l~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 175 (195)
T 3cgg_A 124 -----DGREPALANIHRALGADGRAVIGFGAGRGWVFGDFLEVAERVGLELENAFES 175 (195)
T ss_dssp -----HHHHHHHHHHHHHEEEEEEEEEEEETTSSCCHHHHHHHHHHHTEEEEEEESS
T ss_pred -----HHHHHHHHHHHHHhCCCCEEEEEeCCCCCcCHHHHHHHHHHcCCEEeeeecc
Confidence 113456666677788888776655433 36899999999999987666544
No 104
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.15 E-value=7.6e-10 Score=103.17 Aligned_cols=131 Identities=13% Similarity=0.086 Sum_probs=93.5
Q ss_pred CCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCcccc
Q 015035 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~~~p~~~~~~~~~~~~~ 194 (414)
.+.+|||||||+|.++..++... +.+++|+|+|+.+++.|++++... .+++++..|..+
T Consensus 55 ~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~~d~~~---------------- 113 (266)
T 3ujc_A 55 ENSKVLDIGSGLGGGCMYINEKY-GAHTHGIDICSNIVNMANERVSGN----NKIIFEANDILT---------------- 113 (266)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHTCCSC----TTEEEEECCTTT----------------
T ss_pred CCCEEEEECCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhhcC----CCeEEEECcccc----------------
Confidence 34699999999999999998876 789999999999999999987643 478998887532
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccccccccCCCccccCCCCCccc
Q 015035 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMV 274 (414)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em~ 274 (414)
+ . ..+++||+|+|+-.+..-.
T Consensus 114 -------------------------------------~-~--~~~~~fD~v~~~~~l~~~~------------------- 134 (266)
T 3ujc_A 114 -------------------------------------K-E--FPENNFDLIYSRDAILALS------------------- 134 (266)
T ss_dssp -------------------------------------C-C--CCTTCEEEEEEESCGGGSC-------------------
T ss_pred -------------------------------------C-C--CCCCcEEEEeHHHHHHhcC-------------------
Confidence 0 0 1246899999987554220
Q ss_pred ccCChHHHHHHHHHHHHHhhccCcEEEEEe-C--------------------CcCCHHHHHHHHHHcCCceEEEEEe
Q 015035 275 CSGGERAFITRIIEDSVALKQTFRWYTSMV-G--------------------RKSNLKFLISKLRKVGVTIVKTTEF 330 (414)
Q Consensus 275 ~~GGe~~Fv~rii~eS~~l~~~~~w~t~mv-g--------------------k~~~l~~l~~~l~~~g~~~v~~~e~ 330 (414)
..-...++++...+++++|++.+.. . ..-+...+.+.|++.|+..+.+...
T Consensus 135 -----~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 206 (266)
T 3ujc_A 135 -----LENKNKLFQKCYKWLKPTGTLLITDYCATEKENWDDEFKEYVKQRKYTLITVEEYADILTACNFKNVVSKDL 206 (266)
T ss_dssp -----HHHHHHHHHHHHHHEEEEEEEEEEEEEESCGGGCCHHHHHHHHHHTCCCCCHHHHHHHHHHTTCEEEEEEEC
T ss_pred -----hHHHHHHHHHHHHHcCCCCEEEEEEeccCCcccchHHHHHHHhcCCCCCCCHHHHHHHHHHcCCeEEEEEeC
Confidence 0123455566666677777654332 1 1235788999999999987766543
No 105
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.14 E-value=3.3e-10 Score=116.32 Aligned_cols=61 Identities=16% Similarity=0.023 Sum_probs=49.8
Q ss_pred CCCeEEEECCcccHHHHHHHHHh-------------cCCeeEEecCcHHHHHHHHHHHHHCCCCCC-cEEEEEccC
Q 015035 115 DKVKGFDIGTGANCIYPLLGASL-------------LGWSFVGSDMTDVALEWAEKNVKSNPHISE-LIEIRKVDN 176 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~-------------~~~~vvgvDis~~Al~~A~~N~~~n~~l~~-rI~~~~~d~ 176 (414)
...+|||+|||||.+.+.++... ...+++|+|+++.+++.|+.|+..++ +.. .+.++++|.
T Consensus 171 ~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g-~~~~~~~i~~gD~ 245 (445)
T 2okc_A 171 MGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHG-IGTDRSPIVCEDS 245 (445)
T ss_dssp TTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTT-CCSSCCSEEECCT
T ss_pred CCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhC-CCcCCCCEeeCCC
Confidence 34689999999999988877653 45689999999999999999999886 642 567777764
No 106
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.13 E-value=1.7e-09 Score=101.60 Aligned_cols=58 Identities=19% Similarity=0.204 Sum_probs=49.7
Q ss_pred CCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
...+|||||||+|.+...|+... .+++|+|+|+.+++.|+++++.++ +. ++.++.+|.
T Consensus 37 ~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~l~~a~~~~~~~~-~~-~v~~~~~d~ 94 (260)
T 1vl5_A 37 GNEEVLDVATGGGHVANAFAPFV--KKVVAFDLTEDILKVARAFIEGNG-HQ-QVEYVQGDA 94 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHGGGS--SEEEEEESCHHHHHHHHHHHHHTT-CC-SEEEEECCC
T ss_pred CCCEEEEEeCCCCHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHhcC-CC-ceEEEEecH
Confidence 34699999999999998888754 399999999999999999998885 54 689988874
No 107
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.13 E-value=3.8e-10 Score=105.35 Aligned_cols=60 Identities=10% Similarity=0.116 Sum_probs=54.9
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
..+|||||||+|..++.|+...++.+|+|+|+++.+++.|++|++.++ +.++|+++.+|.
T Consensus 72 ~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~-~~~~v~~~~~d~ 131 (232)
T 3ntv_A 72 VKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYH-FENQVRIIEGNA 131 (232)
T ss_dssp CCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTT-CTTTEEEEESCG
T ss_pred CCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC-CCCcEEEEECCH
Confidence 468999999999999999987778999999999999999999999996 878999999874
No 108
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.13 E-value=1.5e-09 Score=103.96 Aligned_cols=60 Identities=18% Similarity=0.229 Sum_probs=53.0
Q ss_pred CCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
...+|||||||+|.....|+... +.+++|+|+++.+++.|+++++..+ +.++++++.+|.
T Consensus 82 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~~~~~~~d~ 141 (297)
T 2o57_A 82 RQAKGLDLGAGYGGAARFLVRKF-GVSIDCLNIAPVQNKRNEEYNNQAG-LADNITVKYGSF 141 (297)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHHT-CTTTEEEEECCT
T ss_pred CCCEEEEeCCCCCHHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHhcC-CCcceEEEEcCc
Confidence 34699999999999999988765 6799999999999999999998885 778899998875
No 109
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.12 E-value=1.6e-09 Score=99.83 Aligned_cols=54 Identities=22% Similarity=0.320 Sum_probs=47.0
Q ss_pred CeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 117 VKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 117 ~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
.+|||||||+|.++..++.. .+++|+|+|+.+++.|++++..++ .+++++..|.
T Consensus 35 ~~vLdiG~G~G~~~~~l~~~---~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~~d~ 88 (243)
T 3d2l_A 35 KRIADIGCGTGTATLLLADH---YEVTGVDLSEEMLEIAQEKAMETN---RHVDFWVQDM 88 (243)
T ss_dssp CEEEEESCTTCHHHHHHTTT---SEEEEEESCHHHHHHHHHHHHHTT---CCCEEEECCG
T ss_pred CeEEEecCCCCHHHHHHhhC---CeEEEEECCHHHHHHHHHhhhhcC---CceEEEEcCh
Confidence 68999999999999888765 799999999999999999998774 3588887764
No 110
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.12 E-value=2.8e-10 Score=104.45 Aligned_cols=60 Identities=20% Similarity=0.200 Sum_probs=54.6
Q ss_pred CCeEEEECCcccHHHHHHHHHhc-CCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLL-GWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~-~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
+.+|||||||+|..++.++..++ +.+++++|+++.+++.|++|++.++ +.++|+++++|.
T Consensus 65 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~-~~~~v~~~~~d~ 125 (225)
T 3tr6_A 65 AKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAG-LSDKIGLRLSPA 125 (225)
T ss_dssp CSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTT-CTTTEEEEESCH
T ss_pred CCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCC-CCCceEEEeCCH
Confidence 35899999999999999998877 7899999999999999999999996 888899998874
No 111
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.12 E-value=2e-10 Score=119.19 Aligned_cols=148 Identities=14% Similarity=0.059 Sum_probs=102.8
Q ss_pred CCCeEEEECCcccHHHHHHHHHhcC-CeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccc
Q 015035 115 DKVKGFDIGTGANCIYPLLGASLLG-WSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQ 193 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~~~-~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~~~p~~~~~~~~~~~~ 193 (414)
.+.+|||+|||+|.+++.||...++ .+|+|+|+|+.+++.+++|+++++ +. +|.+++.|...
T Consensus 105 ~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g-~~-nv~v~~~Da~~--------------- 167 (456)
T 3m4x_A 105 PGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWG-VS-NAIVTNHAPAE--------------- 167 (456)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHT-CS-SEEEECCCHHH---------------
T ss_pred CCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcC-CC-ceEEEeCCHHH---------------
Confidence 3468999999999999999987764 699999999999999999999996 65 58887765311
Q ss_pred cccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccccccccCCCccccCCCCCcc
Q 015035 194 DESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEM 273 (414)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em 273 (414)
+... ..++||.|+||||+.....- ..+|.....-+.+.+
T Consensus 168 --------------------------------------l~~~--~~~~FD~Il~DaPCSg~G~~-rr~p~~~~~~~~~~~ 206 (456)
T 3m4x_A 168 --------------------------------------LVPH--FSGFFDRIVVDAPCSGEGMF-RKDPNAIKEWTEESP 206 (456)
T ss_dssp --------------------------------------HHHH--HTTCEEEEEEECCCCCGGGT-TTCHHHHHHCCTTHH
T ss_pred --------------------------------------hhhh--ccccCCEEEECCCCCCcccc-ccCHHHhhhcCHHHH
Confidence 1110 13689999999998643221 123332211112100
Q ss_pred cccCChHHHHHHHHHHHHHhhccCcEEE---EEeCCcCCHHHHHHHHHHcCCc
Q 015035 274 VCSGGERAFITRIIEDSVALKQTFRWYT---SMVGRKSNLKFLISKLRKVGVT 323 (414)
Q Consensus 274 ~~~GGe~~Fv~rii~eS~~l~~~~~w~t---~mvgk~~~l~~l~~~l~~~g~~ 323 (414)
. .-.....+|++.+..+++++|.+. +-+...++-..+...|+++++.
T Consensus 207 ~---~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~eEne~vv~~~l~~~~~~ 256 (456)
T 3m4x_A 207 L---YCQKRQQEILSSAIKMLKNKGQLIYSTCTFAPEENEEIISWLVENYPVT 256 (456)
T ss_dssp H---HHHHHHHHHHHHHHHTEEEEEEEEEEESCCCGGGTHHHHHHHHHHSSEE
T ss_pred H---HHHHHHHHHHHHHHHhcCCCcEEEEEEeecccccCHHHHHHHHHhCCCE
Confidence 0 012355688999999988888653 3556577888888899998843
No 112
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.12 E-value=3.8e-10 Score=106.12 Aligned_cols=60 Identities=17% Similarity=0.172 Sum_probs=52.8
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHC--------CCCCCcEEEEEccCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSN--------PHISELIEIRKVDNS 177 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n--------~~l~~rI~~~~~d~~ 177 (414)
..+|||||||+|.+++.++...++.+|+|+|+|+.+++.|++|++.+ + + .++.++.+|..
T Consensus 50 ~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~-~-~nv~~~~~D~~ 117 (246)
T 2vdv_E 50 KVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHG-F-QNINVLRGNAM 117 (246)
T ss_dssp CEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCST-T-TTEEEEECCTT
T ss_pred CCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccC-C-CcEEEEeccHH
Confidence 46899999999999999999888889999999999999999999875 4 4 46999988753
No 113
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.11 E-value=1.7e-10 Score=115.75 Aligned_cols=88 Identities=11% Similarity=0.168 Sum_probs=62.7
Q ss_pred cEEEecCCCeeCCCCC-cHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHH
Q 015035 75 LNWWIPDGQLCPTVPN-RSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALE 153 (414)
Q Consensus 75 l~~~vp~gvLiPriP~-R~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~ 153 (414)
+.|.++++.+....+. ....+.|+.+.+.. .+.+|||+|||+|.+++.||. ...+|+|+|+++.|++
T Consensus 182 ~~~~~~~~~F~Q~n~~~~~~l~~~~~~~~~~----------~~~~vLDl~cG~G~~~l~la~--~~~~V~gvd~~~~ai~ 249 (369)
T 3bt7_A 182 MIYRQVENSFTQPNAAMNIQMLEWALDVTKG----------SKGDLLELYCGNGNFSLALAR--NFDRVLATEIAKPSVA 249 (369)
T ss_dssp CEEEEETTSCCCSBHHHHHHHHHHHHHHTTT----------CCSEEEEESCTTSHHHHHHGG--GSSEEEEECCCHHHHH
T ss_pred EEEEECCCCeecCCHHHHHHHHHHHHHHhhc----------CCCEEEEccCCCCHHHHHHHh--cCCEEEEEECCHHHHH
Confidence 4455555555553221 12233444444432 135799999999999998876 3458999999999999
Q ss_pred HHHHHHHHCCCCCCcEEEEEccC
Q 015035 154 WAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 154 ~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
.|++|++.|+ + ++++++.+|.
T Consensus 250 ~a~~n~~~ng-~-~~v~~~~~d~ 270 (369)
T 3bt7_A 250 AAQYNIAANH-I-DNVQIIRMAA 270 (369)
T ss_dssp HHHHHHHHTT-C-CSEEEECCCS
T ss_pred HHHHHHHHcC-C-CceEEEECCH
Confidence 9999999996 7 4799988774
No 114
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.11 E-value=2.8e-09 Score=98.98 Aligned_cols=57 Identities=11% Similarity=-0.106 Sum_probs=49.9
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
..+|||||||+|.++..|+...+..+|+|+|+++.+++.|++|++.+ .++.++.+|.
T Consensus 75 ~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~----~~v~~~~~d~ 131 (230)
T 1fbn_A 75 DSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER----ENIIPILGDA 131 (230)
T ss_dssp TCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC----TTEEEEECCT
T ss_pred CCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC----CCeEEEECCC
Confidence 46899999999999999998766679999999999999999998754 4688888874
No 115
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.10 E-value=4e-10 Score=103.48 Aligned_cols=60 Identities=18% Similarity=0.190 Sum_probs=54.9
Q ss_pred CCeEEEECCcccHHHHHHHHHhc-CCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLL-GWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~-~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
+.+|||||||+|..+..++...+ +.+++|+|+++.+++.|++|++.++ +.++|+++.+|.
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~-~~~~v~~~~~d~ 119 (223)
T 3duw_A 59 ARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERAN-LNDRVEVRTGLA 119 (223)
T ss_dssp CSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTT-CTTTEEEEESCH
T ss_pred CCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC-CCCcEEEEEcCH
Confidence 46899999999999999998877 7899999999999999999999986 888899998874
No 116
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.10 E-value=1.4e-09 Score=101.23 Aligned_cols=133 Identities=10% Similarity=0.029 Sum_probs=94.0
Q ss_pred CCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCcccc
Q 015035 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~~~p~~~~~~~~~~~~~ 194 (414)
...+|||||||+|.++..|+... ..+++|+|+|+.+++.|++++..++ ..++.++..|..+
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~~d~~~---------------- 139 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL-FREVDMVDITEDFLVQAKTYLGEEG--KRVRNYFCCGLQD---------------- 139 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT-CSEEEEEESCHHHHHHHHHHTGGGG--GGEEEEEECCGGG----------------
T ss_pred CCCEEEEECCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHhhhcC--CceEEEEEcChhh----------------
Confidence 35699999999999998887755 5699999999999999999988763 3468888776321
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccccccccCCCccccCCCCCccc
Q 015035 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMV 274 (414)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em~ 274 (414)
+ ...+++||+|+|+-.+..-. +
T Consensus 140 -------------------------------------~---~~~~~~fD~v~~~~~l~~~~---------------~--- 161 (241)
T 2ex4_A 140 -------------------------------------F---TPEPDSYDVIWIQWVIGHLT---------------D--- 161 (241)
T ss_dssp -------------------------------------C---CCCSSCEEEEEEESCGGGSC---------------H---
T ss_pred -------------------------------------c---CCCCCCEEEEEEcchhhhCC---------------H---
Confidence 0 01245899999985332110 0
Q ss_pred ccCChHHHHHHHHHHHHHhhccCcEEEEEeC-C-------------cCCHHHHHHHHHHcCCceEEEEEe
Q 015035 275 CSGGERAFITRIIEDSVALKQTFRWYTSMVG-R-------------KSNLKFLISKLRKVGVTIVKTTEF 330 (414)
Q Consensus 275 ~~GGe~~Fv~rii~eS~~l~~~~~w~t~mvg-k-------------~~~l~~l~~~l~~~g~~~v~~~e~ 330 (414)
.-+..++++...+++++|++.+... . ..+...+.+.|++.|+..+++...
T Consensus 162 ------~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 225 (241)
T 2ex4_A 162 ------QHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLLAEERQ 225 (241)
T ss_dssp ------HHHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCEEEEEEC
T ss_pred ------HHHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCeEEEeeec
Confidence 1234566777778888887654221 0 116889999999999987776543
No 117
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.10 E-value=1e-09 Score=106.03 Aligned_cols=135 Identities=10% Similarity=0.104 Sum_probs=92.6
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHH--CCCC-CCcEEEEEccCCCCCCcccccccCCcc
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKS--NPHI-SELIEIRKVDNSESTPSIQESLTGKSV 192 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~--n~~l-~~rI~~~~~d~~~~~p~~~~~~~~~~~ 192 (414)
+.+|||||||+|.++..+++..+..+|+++|+|+.+++.|++|+.. ++ + ..+++++.+|..+
T Consensus 76 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~-~~~~rv~v~~~D~~~-------------- 140 (275)
T 1iy9_A 76 PEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGK-LDDPRVDVQVDDGFM-------------- 140 (275)
T ss_dssp CCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTT-TTSTTEEEEESCSHH--------------
T ss_pred CCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccc-cCCCceEEEECcHHH--------------
Confidence 4699999999999999888755567999999999999999999854 22 3 4689999887421
Q ss_pred ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccccccccCCCccccCCCCCc
Q 015035 193 QDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEE 272 (414)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~E 272 (414)
.+. ...++||+|++|+|+... |...+
T Consensus 141 --------------------------------------~l~---~~~~~fD~Ii~d~~~~~~-------~~~~l------ 166 (275)
T 1iy9_A 141 --------------------------------------HIA---KSENQYDVIMVDSTEPVG-------PAVNL------ 166 (275)
T ss_dssp --------------------------------------HHH---TCCSCEEEEEESCSSCCS-------CCCCC------
T ss_pred --------------------------------------HHh---hCCCCeeEEEECCCCCCC-------cchhh------
Confidence 111 124689999999986211 10000
Q ss_pred ccccCChHHHHHHHHHHHHHhhccCcEEEEEeCCc----CCHHHHHHHHHHcCCceEEEEE
Q 015035 273 MVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRK----SNLKFLISKLRKVGVTIVKTTE 329 (414)
Q Consensus 273 m~~~GGe~~Fv~rii~eS~~l~~~~~w~t~mvgk~----~~l~~l~~~l~~~g~~~v~~~e 329 (414)
+...++++....++++|++.+..+.. ..+..+.+.|++. +..+....
T Consensus 167 ---------~~~~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~-F~~v~~~~ 217 (275)
T 1iy9_A 167 ---------FTKGFYAGIAKALKEDGIFVAQTDNPWFTPELITNVQRDVKEI-FPITKLYT 217 (275)
T ss_dssp ---------STTHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTT-CSEEEEEE
T ss_pred ---------hHHHHHHHHHHhcCCCcEEEEEcCCccccHHHHHHHHHHHHHh-CCCeEEEE
Confidence 11233445567888999987776542 2356677777776 55555543
No 118
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.10 E-value=4.7e-10 Score=108.47 Aligned_cols=47 Identities=15% Similarity=0.184 Sum_probs=41.8
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSN 162 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n 162 (414)
..+|||||||+|.+++.|+..+++.+|+|+|+|+.+++.|++|++.+
T Consensus 47 ~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~ 93 (292)
T 3g07_A 47 GRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHY 93 (292)
T ss_dssp TSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC---
T ss_pred CCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhh
Confidence 46899999999999999999888899999999999999999998765
No 119
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.09 E-value=5.2e-10 Score=104.53 Aligned_cols=59 Identities=10% Similarity=-0.028 Sum_probs=53.6
Q ss_pred CeEEEECCcccHHHHHHHHHhc-CCeeEEecCcHHHHHHHHHHHHHCCCCC-CcEEEEEccC
Q 015035 117 VKGFDIGTGANCIYPLLGASLL-GWSFVGSDMTDVALEWAEKNVKSNPHIS-ELIEIRKVDN 176 (414)
Q Consensus 117 ~~vLDIGtGsG~I~i~La~~~~-~~~vvgvDis~~Al~~A~~N~~~n~~l~-~rI~~~~~d~ 176 (414)
.+|||||||+|..++.|+..++ +.+|+++|+|+.+++.|++|++.++ +. ++|+++.+|.
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g-~~~~~i~~~~gda 118 (221)
T 3dr5_A 58 TGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAG-YSPSRVRFLLSRP 118 (221)
T ss_dssp CEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTT-CCGGGEEEECSCH
T ss_pred CCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC-CCcCcEEEEEcCH
Confidence 4899999999999999998765 7899999999999999999999996 87 7999998763
No 120
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.09 E-value=7.2e-10 Score=109.46 Aligned_cols=171 Identities=15% Similarity=0.046 Sum_probs=108.1
Q ss_pred cCCcEEEecCCCeeCCCCCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHH
Q 015035 72 DHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVA 151 (414)
Q Consensus 72 ~fgl~~~vp~gvLiPriP~R~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~A 151 (414)
.||..+.+...+.+++ +....|-+.+..+.... . ..+.+|||||||+|.++..+++..+..+++++|+|+.+
T Consensus 73 ~~g~~l~ldg~~q~~~-~de~~Y~e~l~~l~l~~-~------~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~ 144 (314)
T 2b2c_A 73 TYGNVLVLDGIVQATE-RDEFSYQEMLAHLPMFA-H------PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMV 144 (314)
T ss_dssp TTEEEEEETTEEEEES-SSSSHHHHHHHHHHHHH-S------SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHH
T ss_pred CCCEEEEECCEeecCC-cchhHHHHHHHHHHHhh-C------CCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHH
Confidence 5677788876677776 33345544443332110 0 13469999999999999999886677899999999999
Q ss_pred HHHHHHHHHHCC-CC-CCcEEEEEccCCCCCCcccccccCCccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 015035 152 LEWAEKNVKSNP-HI-SELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGP 229 (414)
Q Consensus 152 l~~A~~N~~~n~-~l-~~rI~~~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (414)
++.|++|+...+ ++ ..+++++.+|..+
T Consensus 145 i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~--------------------------------------------------- 173 (314)
T 2b2c_A 145 IDVAKKFLPGMSCGFSHPKLDLFCGDGFE--------------------------------------------------- 173 (314)
T ss_dssp HHHHHHHCTTTSGGGGCTTEEEECSCHHH---------------------------------------------------
T ss_pred HHHHHHHHHHhccccCCCCEEEEEChHHH---------------------------------------------------
Confidence 999999986531 13 4678888776321
Q ss_pred CccccccCCCCcEEEEEECCCcccccccccCCCccccCCCCCcccccCChHHHHHHHHHHHHHhhccCcEEEEEeCCcC-
Q 015035 230 PVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKS- 308 (414)
Q Consensus 230 ~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em~~~GGe~~Fv~rii~eS~~l~~~~~w~t~mvgk~~- 308 (414)
.+. ...++||+|++|+|... .| .. ..+-..++++...+++++|++.+..|...
T Consensus 174 -~l~---~~~~~fD~Ii~d~~~~~-------~~-------~~--------~l~t~~~l~~~~~~LkpgG~lv~~~~~~~~ 227 (314)
T 2b2c_A 174 -FLK---NHKNEFDVIITDSSDPV-------GP-------AE--------SLFGQSYYELLRDALKEDGILSSQGESVWL 227 (314)
T ss_dssp -HHH---HCTTCEEEEEECCC-----------------------------------HHHHHHHHEEEEEEEEEECCCTTT
T ss_pred -HHH---hcCCCceEEEEcCCCCC-------Cc-------ch--------hhhHHHHHHHHHhhcCCCeEEEEECCCccc
Confidence 111 12468999999995210 01 11 01225566677788999999888766432
Q ss_pred ---CHHHHHHHHHHcCCceEEEE
Q 015035 309 ---NLKFLISKLRKVGVTIVKTT 328 (414)
Q Consensus 309 ---~l~~l~~~l~~~g~~~v~~~ 328 (414)
....+.+.+++. +..+.+.
T Consensus 228 ~~~~~~~~~~~l~~v-F~~v~~~ 249 (314)
T 2b2c_A 228 HLPLIAHLVAFNRKI-FPAVTYA 249 (314)
T ss_dssp CHHHHHHHHHHHHHH-CSEEEEE
T ss_pred CHHHHHHHHHHHHHH-CCcceEE
Confidence 245556666665 4445443
No 121
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.09 E-value=2.4e-09 Score=101.99 Aligned_cols=56 Identities=16% Similarity=0.218 Sum_probs=49.9
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
+.+|||||||+|.++..|+.. +.+|+|+|+|+.+++.|++++..++ + +++++..|.
T Consensus 121 ~~~vLD~GcG~G~~~~~l~~~--g~~v~~vD~s~~~~~~a~~~~~~~~-~--~~~~~~~d~ 176 (286)
T 3m70_A 121 PCKVLDLGCGQGRNSLYLSLL--GYDVTSWDHNENSIAFLNETKEKEN-L--NISTALYDI 176 (286)
T ss_dssp SCEEEEESCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTT-C--CEEEEECCG
T ss_pred CCcEEEECCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHHcC-C--ceEEEEecc
Confidence 468999999999999988875 6799999999999999999999986 5 789888874
No 122
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.08 E-value=8.4e-10 Score=103.03 Aligned_cols=56 Identities=13% Similarity=0.160 Sum_probs=46.7
Q ss_pred CCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
.+.+|||||||+|.++..++...+. +++|+|+|+.+++.|++++. . .+++++..|.
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~-~----~~~~~~~~d~ 99 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHGAK-KVLGIDLSERMLTEAKRKTT-S----PVVCYEQKAI 99 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCS-EEEEEESCHHHHHHHHHHCC-C----TTEEEEECCG
T ss_pred CCCEEEEECCCCCHHHHHHHHcCCC-EEEEEECCHHHHHHHHHhhc-c----CCeEEEEcch
Confidence 4579999999999999988876433 99999999999999999876 2 3688888774
No 123
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.08 E-value=3.3e-09 Score=95.56 Aligned_cols=132 Identities=10% Similarity=-0.017 Sum_probs=92.5
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccc
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~~~p~~~~~~~~~~~~~~ 195 (414)
..+|||||||+|.+...|+.. +.+++|+|+++.+++.|+++. .++.++..|..+
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~-------~~~~~~~~d~~~----------------- 95 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL--GHQIEGLEPATRLVELARQTH-------PSVTFHHGTITD----------------- 95 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT--TCCEEEECCCHHHHHHHHHHC-------TTSEEECCCGGG-----------------
T ss_pred CCeEEEecCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHHhC-------CCCeEEeCcccc-----------------
Confidence 368999999999999888875 679999999999999999872 146777665321
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccccccccCCCccccCCCCCcccc
Q 015035 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (414)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em~~ 275 (414)
+ ...+++||+|+|+-.+.... ..
T Consensus 96 ------------------------------------~---~~~~~~fD~v~~~~~l~~~~-------------~~----- 118 (203)
T 3h2b_A 96 ------------------------------------L---SDSPKRWAGLLAWYSLIHMG-------------PG----- 118 (203)
T ss_dssp ------------------------------------G---GGSCCCEEEEEEESSSTTCC-------------TT-----
T ss_pred ------------------------------------c---ccCCCCeEEEEehhhHhcCC-------------HH-----
Confidence 0 01247899999986543210 01
Q ss_pred cCChHHHHHHHHHHHHHhhccCcEEEEEeCCc---------------CCHHHHHHHHHHcCCceEEEEEecCCCeeE
Q 015035 276 SGGERAFITRIIEDSVALKQTFRWYTSMVGRK---------------SNLKFLISKLRKVGVTIVKTTEFVQGQTCR 337 (414)
Q Consensus 276 ~GGe~~Fv~rii~eS~~l~~~~~w~t~mvgk~---------------~~l~~l~~~l~~~g~~~v~~~e~~qG~t~R 337 (414)
-...++++...+++++|++.+..... -+...+.+.|++.|++.+.+... .++...
T Consensus 119 ------~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~-~~~p~~ 188 (203)
T 3h2b_A 119 ------ELPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVTSSHWD-PRFPHA 188 (203)
T ss_dssp ------THHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEEEEEEC-TTSSEE
T ss_pred ------HHHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEEEEEec-CCCcch
Confidence 13455666677888888775544222 34899999999999987776654 444443
No 124
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.08 E-value=1.6e-09 Score=99.86 Aligned_cols=60 Identities=7% Similarity=0.051 Sum_probs=54.3
Q ss_pred CCeEEEECCcccHHHHHHHHHhc-CCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLL-GWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~-~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
+.+|||||||+|..++.++...+ +.+|+|+|+++.+++.|++|++.++ +.++|+++.+|.
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~-~~~~v~~~~~d~ 119 (221)
T 3u81_A 59 PSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAG-LQDKVTILNGAS 119 (221)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHT-CGGGEEEEESCH
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcC-CCCceEEEECCH
Confidence 36899999999999999998764 7899999999999999999999996 888899999874
No 125
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.08 E-value=2.1e-09 Score=101.97 Aligned_cols=60 Identities=15% Similarity=0.087 Sum_probs=51.1
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
+.+|||||||+|.++..++.. +..+++|+|+++.+++.|++++..++ +..++.++..|..
T Consensus 65 ~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~v~~~~~d~~ 124 (298)
T 1ri5_A 65 GDSVLDLGCGKGGDLLKYERA-GIGEYYGVDIAEVSINDARVRARNMK-RRFKVFFRAQDSY 124 (298)
T ss_dssp TCEEEEETCTTTTTHHHHHHH-TCSEEEEEESCHHHHHHHHHHHHTSC-CSSEEEEEESCTT
T ss_pred CCeEEEECCCCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHhcC-CCccEEEEECCcc
Confidence 469999999999988877664 44599999999999999999999885 7678999988753
No 126
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.07 E-value=2e-09 Score=104.31 Aligned_cols=60 Identities=12% Similarity=0.051 Sum_probs=52.8
Q ss_pred CCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
...+|||||||+|.++..++... +++|+|+|+|+.+++.|++++..++ +.++++++..|.
T Consensus 90 ~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~v~~~~~d~ 149 (318)
T 2fk8_A 90 PGMTLLDIGCGWGTTMRRAVERF-DVNVIGLTLSKNQHARCEQVLASID-TNRSRQVLLQGW 149 (318)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHTSC-CSSCEEEEESCG
T ss_pred CcCEEEEEcccchHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcC-CCCceEEEECCh
Confidence 34689999999999999888765 6799999999999999999999885 777899988763
No 127
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.07 E-value=2.4e-09 Score=98.73 Aligned_cols=129 Identities=16% Similarity=0.181 Sum_probs=91.3
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccc
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~~~p~~~~~~~~~~~~~~ 195 (414)
..+|||||||+|.++..++.. +.+++|+|+++.+++.|+++.. ..+++++..|..+
T Consensus 54 ~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~-----~~~~~~~~~d~~~----------------- 109 (242)
T 3l8d_A 54 EAEVLDVGCGDGYGTYKLSRT--GYKAVGVDISEVMIQKGKERGE-----GPDLSFIKGDLSS----------------- 109 (242)
T ss_dssp TCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHTTTC-----BTTEEEEECBTTB-----------------
T ss_pred CCeEEEEcCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHhhcc-----cCCceEEEcchhc-----------------
Confidence 368999999999999888875 6799999999999999988752 2468898887531
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccccccccCCCccccCCCCCcccc
Q 015035 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (414)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em~~ 275 (414)
+ ...+++||+|+|+-.+... .+
T Consensus 110 ------------------------------------~---~~~~~~fD~v~~~~~l~~~---------------~~---- 131 (242)
T 3l8d_A 110 ------------------------------------L---PFENEQFEAIMAINSLEWT---------------EE---- 131 (242)
T ss_dssp ------------------------------------C---SSCTTCEEEEEEESCTTSS---------------SC----
T ss_pred ------------------------------------C---CCCCCCccEEEEcChHhhc---------------cC----
Confidence 0 0124689999998655421 11
Q ss_pred cCChHHHHHHHHHHHHHhhccCcEEEEEe-CC--------------------cCCHHHHHHHHHHcCCceEEEEEecCC
Q 015035 276 SGGERAFITRIIEDSVALKQTFRWYTSMV-GR--------------------KSNLKFLISKLRKVGVTIVKTTEFVQG 333 (414)
Q Consensus 276 ~GGe~~Fv~rii~eS~~l~~~~~w~t~mv-gk--------------------~~~l~~l~~~l~~~g~~~v~~~e~~qG 333 (414)
..+++++...+++++|++.+.. +. .-+...+...|++.|++.+.+.....+
T Consensus 132 -------~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~ 203 (242)
T 3l8d_A 132 -------PLRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKVVDGIGVYKR 203 (242)
T ss_dssp -------HHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEEEEEEEEECT
T ss_pred -------HHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEEEEeeccccc
Confidence 1244566666777777665443 11 134568999999999998877655443
No 128
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.06 E-value=8.8e-10 Score=104.11 Aligned_cols=60 Identities=12% Similarity=0.107 Sum_probs=55.0
Q ss_pred CCeEEEECCcccHHHHHHHHHhc-CCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLL-GWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~-~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
..+|||||||+|..++.++..++ +.+|+|+|+++.+++.|++|++.++ +.++|+++.+|.
T Consensus 64 ~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g-~~~~v~~~~~d~ 124 (248)
T 3tfw_A 64 AKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAG-VDQRVTLREGPA 124 (248)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTT-CTTTEEEEESCH
T ss_pred CCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC-CCCcEEEEEcCH
Confidence 46899999999999999998887 7899999999999999999999996 888999998874
No 129
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.06 E-value=8.6e-09 Score=94.90 Aligned_cols=57 Identities=11% Similarity=-0.015 Sum_probs=49.6
Q ss_pred CCeEEEECCcccHHHHHHHHHh-cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL-LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~-~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
..+|||+|||+|.++..|+... ++.+|+|+|+++.+++.|++|++.+ .+++++.+|.
T Consensus 74 ~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~----~~v~~~~~d~ 131 (227)
T 1g8a_A 74 GKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER----RNIVPILGDA 131 (227)
T ss_dssp TCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC----TTEEEEECCT
T ss_pred CCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc----CCCEEEEccC
Confidence 4689999999999999999875 4579999999999999999999765 4689988875
No 130
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.06 E-value=4.6e-09 Score=97.56 Aligned_cols=130 Identities=12% Similarity=0.009 Sum_probs=92.7
Q ss_pred CCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCcccc
Q 015035 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~~~p~~~~~~~~~~~~~ 194 (414)
...+|||||||+|.++..|+... ..+++|+|+++.+++.|++++..+ .+++++..|..+
T Consensus 93 ~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~~d~~~---------------- 151 (254)
T 1xtp_A 93 GTSRALDCGAGIGRITKNLLTKL-YATTDLLEPVKHMLEEAKRELAGM----PVGKFILASMET---------------- 151 (254)
T ss_dssp CCSEEEEETCTTTHHHHHTHHHH-CSEEEEEESCHHHHHHHHHHTTTS----SEEEEEESCGGG----------------
T ss_pred CCCEEEEECCCcCHHHHHHHHhh-cCEEEEEeCCHHHHHHHHHHhccC----CceEEEEccHHH----------------
Confidence 35699999999999999888765 458999999999999999998654 468888876421
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccccccccCCCccccCCCCCccc
Q 015035 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMV 274 (414)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em~ 274 (414)
+ . ...++||+|+|+-.+..-.
T Consensus 152 -------------------------------------~-~--~~~~~fD~v~~~~~l~~~~------------------- 172 (254)
T 1xtp_A 152 -------------------------------------A-T--LPPNTYDLIVIQWTAIYLT------------------- 172 (254)
T ss_dssp -------------------------------------C-C--CCSSCEEEEEEESCGGGSC-------------------
T ss_pred -------------------------------------C-C--CCCCCeEEEEEcchhhhCC-------------------
Confidence 0 0 1246899999976543210
Q ss_pred ccCChHHHHHHHHHHHHHhhccCcEEEEEeCC---------------cCCHHHHHHHHHHcCCceEEEEE
Q 015035 275 CSGGERAFITRIIEDSVALKQTFRWYTSMVGR---------------KSNLKFLISKLRKVGVTIVKTTE 329 (414)
Q Consensus 275 ~~GGe~~Fv~rii~eS~~l~~~~~w~t~mvgk---------------~~~l~~l~~~l~~~g~~~v~~~e 329 (414)
. .-...++++...+++++|++.+.... ..+.+.+.++|++.|+..+++..
T Consensus 173 ----~-~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 237 (254)
T 1xtp_A 173 ----D-ADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESGVRVVKEAF 237 (254)
T ss_dssp ----H-HHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHTCCEEEEEE
T ss_pred ----H-HHHHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHHCCCEEEEeee
Confidence 0 12455666677778888876554310 12468899999999999777654
No 131
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.06 E-value=4.7e-09 Score=99.89 Aligned_cols=59 Identities=10% Similarity=0.034 Sum_probs=51.6
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
..+|||||||+|.++..++... +.+++|+|+|+.+++.|++++...+ +.++++++..|.
T Consensus 65 ~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvd~s~~~~~~a~~~~~~~~-~~~~~~~~~~d~ 123 (287)
T 1kpg_A 65 GMTLLDVGCGWGATMMRAVEKY-DVNVVGLTLSKNQANHVQQLVANSE-NLRSKRVLLAGW 123 (287)
T ss_dssp TCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHTCC-CCSCEEEEESCG
T ss_pred cCEEEEECCcccHHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcC-CCCCeEEEECCh
Confidence 4689999999999999888665 5699999999999999999999885 777899988763
No 132
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.06 E-value=2.4e-09 Score=96.32 Aligned_cols=159 Identities=11% Similarity=0.036 Sum_probs=97.2
Q ss_pred CCeEEEECCcccHHHHHHHHHhc--CCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccc
Q 015035 116 KVKGFDIGTGANCIYPLLGASLL--GWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQ 193 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~--~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~~~p~~~~~~~~~~~~ 193 (414)
..+|||||||+|.++..|+.+.+ +.+|+|+|+++.+ . . .+++++++|..+.. .
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~-~-~~v~~~~~d~~~~~-~----------- 77 (201)
T 2plw_A 23 NKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------P-I-PNVYFIQGEIGKDN-M----------- 77 (201)
T ss_dssp TEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------C-C-TTCEEEECCTTTTS-S-----------
T ss_pred CCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------C-C-CCceEEEccccchh-h-----------
Confidence 35899999999999999998877 6899999999831 1 2 35788888754210 0
Q ss_pred cccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccc---------cc--CCCCcEEEEEECCCcccccccccCCC
Q 015035 194 DESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVG---------VV--RDGEQFDFCICNPPFFESMEEAGLNP 262 (414)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~---------~~--~~~~~fD~imcNPPy~~s~ee~~~~P 262 (414)
..+ . .++.+.. +. -.+++||+|+||+++.-.....
T Consensus 78 --~~~-----------------------~-----~~~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~---- 123 (201)
T 2plw_A 78 --NNI-----------------------K-----NINYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKI---- 123 (201)
T ss_dssp --CCC---------------------------------------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHH----
T ss_pred --hhh-----------------------c-----cccccccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcc----
Confidence 000 0 0000000 00 0246899999998653211000
Q ss_pred ccccCCCCCcccccCChHHHHHHHHHHHHHhhccCcEEEEEeCCcCCHHHHHHHHHHcCCceEEEEEecCCCe---eEEE
Q 015035 263 KTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQT---CRWG 339 (414)
Q Consensus 263 ~~a~~g~~~Em~~~GGe~~Fv~rii~eS~~l~~~~~w~t~mvgk~~~l~~l~~~l~~~g~~~v~~~e~~qG~t---~Rw~ 339 (414)
.+. . ........+++++..+++++|++.+.+....+...+...++. .+..+++.+...++. .+|+
T Consensus 124 ------~d~-~----~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~l~~~l~~-~f~~v~~~~~~~~r~~s~e~y~ 191 (201)
T 2plw_A 124 ------DDH-L----NSCELTLSITHFMEQYINIGGTYIVKMYLGSQTNNLKTYLKG-MFQLVHTTKPKASRNESREIYL 191 (201)
T ss_dssp ------HHH-H----HHHHHHHHHHHHHHHHEEEEEEEEEEEECSTTHHHHHHHHHT-TEEEEEECCCC-----CCEEEE
T ss_pred ------cCH-H----HHHHHHHHHHHHHHHHccCCCEEEEEEeCCCCHHHHHHHHHH-HHheEEEECCcccCCcCceEEE
Confidence 000 0 012234457888888999999988766656778888888876 477777777776653 4677
Q ss_pred EEEEec
Q 015035 340 LAWSFV 345 (414)
Q Consensus 340 lAWsf~ 345 (414)
++--|.
T Consensus 192 v~~~~~ 197 (201)
T 2plw_A 192 VCKNFL 197 (201)
T ss_dssp EEEEEC
T ss_pred EEecCc
Confidence 776654
No 133
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.06 E-value=6.6e-10 Score=104.86 Aligned_cols=132 Identities=10% Similarity=0.100 Sum_probs=89.6
Q ss_pred CCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHH------CCCCCCcEEEEEccCCCCCCccccccc
Q 015035 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKS------NPHISELIEIRKVDNSESTPSIQESLT 188 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~------n~~l~~rI~~~~~d~~~~~p~~~~~~~ 188 (414)
...+|||||||+|.+.+.||...+++.|+|+|+++.+++.|+++++. ++ + .+|.++++|..+
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~-~-~nv~~~~~d~~~---------- 113 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGG-F-QNIACLRSNAMK---------- 113 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCC-C-TTEEEEECCTTT----------
T ss_pred CCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcC-C-CeEEEEECcHHH----------
Confidence 34689999999999999999988999999999999999999999864 32 3 469999887531
Q ss_pred CCccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCC--cccccccccCCCcccc
Q 015035 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP--FFESMEEAGLNPKTSC 266 (414)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPP--y~~s~ee~~~~P~~a~ 266 (414)
.+...+ ..++||.|++|-| ++.....
T Consensus 114 ------------------------------------------~l~~~~-~~~~~D~v~~~~~dp~~k~~h~--------- 141 (235)
T 3ckk_A 114 ------------------------------------------HLPNFF-YKGQLTKMFFLFPDPHFKRTKH--------- 141 (235)
T ss_dssp ------------------------------------------CHHHHC-CTTCEEEEEEESCC-----------------
T ss_pred ------------------------------------------hhhhhC-CCcCeeEEEEeCCCchhhhhhh---------
Confidence 011111 2467999988743 3221100
Q ss_pred CCCCCcccccCChHHHHHHHHHHHHHhhccCcEEEEEeCCcCCHHHHHHHHHHcC
Q 015035 267 GGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVG 321 (414)
Q Consensus 267 ~g~~~Em~~~GGe~~Fv~rii~eS~~l~~~~~w~t~mvgk~~~l~~l~~~l~~~g 321 (414)
.. ......++++...+++++|++.+...-......+.+.+.+.+
T Consensus 142 ---kr--------r~~~~~~l~~~~~~LkpGG~l~~~td~~~~~~~~~~~l~~~~ 185 (235)
T 3ckk_A 142 ---KW--------RIISPTLLAEYAYVLRVGGLVYTITDVLELHDWMCTHFEEHP 185 (235)
T ss_dssp --------------CCCHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHTST
T ss_pred ---hh--------hhhhHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHHHHHCC
Confidence 00 011235666777788999988766654555566777777776
No 134
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.05 E-value=5.7e-09 Score=94.90 Aligned_cols=140 Identities=16% Similarity=0.132 Sum_probs=94.4
Q ss_pred CCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCcccc
Q 015035 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~~~p~~~~~~~~~~~~~ 194 (414)
...+|||||||+|.++..|+... .+++|+|+++.+++.|++++..++ ++++++.|..+
T Consensus 51 ~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~d~~~---------------- 108 (216)
T 3ofk_A 51 AVSNGLEIGCAAGAFTEKLAPHC--KRLTVIDVMPRAIGRACQRTKRWS----HISWAATDILQ---------------- 108 (216)
T ss_dssp SEEEEEEECCTTSHHHHHHGGGE--EEEEEEESCHHHHHHHHHHTTTCS----SEEEEECCTTT----------------
T ss_pred CCCcEEEEcCCCCHHHHHHHHcC--CEEEEEECCHHHHHHHHHhcccCC----CeEEEEcchhh----------------
Confidence 34689999999999998888753 599999999999999999987652 68999887532
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccccccccCCCccccCCCCCccc
Q 015035 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMV 274 (414)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em~ 274 (414)
+ ...++||+|+||..+..-.
T Consensus 109 -------------------------------------~----~~~~~fD~v~~~~~l~~~~------------------- 128 (216)
T 3ofk_A 109 -------------------------------------F----STAELFDLIVVAEVLYYLE------------------- 128 (216)
T ss_dssp -------------------------------------C----CCSCCEEEEEEESCGGGSS-------------------
T ss_pred -------------------------------------C----CCCCCccEEEEccHHHhCC-------------------
Confidence 0 0246899999997654211
Q ss_pred ccCChHHHHHHHHHHHHHhhccCcEEEEEe---------CCcCCHHHHHHHHHHcCCceEEEEEecCC-CeeEEEEE
Q 015035 275 CSGGERAFITRIIEDSVALKQTFRWYTSMV---------GRKSNLKFLISKLRKVGVTIVKTTEFVQG-QTCRWGLA 341 (414)
Q Consensus 275 ~~GGe~~Fv~rii~eS~~l~~~~~w~t~mv---------gk~~~l~~l~~~l~~~g~~~v~~~e~~qG-~t~Rw~lA 341 (414)
...-+.+++++...+++++|++.+.. ......+.+...+.+. +..++..+...+ ....|+++
T Consensus 129 ----~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~e~~~~~~~~~~~d~~l~ 200 (216)
T 3ofk_A 129 ----DMTQMRTAIDNMVKMLAPGGHLVFGSARDATCRRWGHVAGAETVITILTEA-LTEVERVQCQGQSADEDCLLA 200 (216)
T ss_dssp ----SHHHHHHHHHHHHHTEEEEEEEEEEEECHHHHHHTTCSCCHHHHHHHHHHH-SEEEEEEEEECSSTTCEEEEE
T ss_pred ----CHHHHHHHHHHHHHHcCCCCEEEEEecCCCcchhhhhhhhHHHHHHHHHhh-ccceEEEeccCCccccchhHH
Confidence 12234566777788888999876532 2344455666666543 444554444322 23455444
No 135
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.05 E-value=8e-10 Score=113.49 Aligned_cols=88 Identities=20% Similarity=0.313 Sum_probs=68.2
Q ss_pred cCCcEEEecCCCeeCCCC-CcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHH
Q 015035 72 DHGLNWWIPDGQLCPTVP-NRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDV 150 (414)
Q Consensus 72 ~fgl~~~vp~gvLiPriP-~R~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~ 150 (414)
..|+.|.++++.+....+ .+..++.++.+ +. ...+|||+|||+|.+++.|+.. ..+|+|+|+|+.
T Consensus 258 ~~g~~f~~~~~~F~q~n~~~~e~l~~~~~~-~~-----------~~~~VLDlgcG~G~~sl~la~~--~~~V~gvD~s~~ 323 (425)
T 2jjq_A 258 LDDVDYLIHPNSFFQTNSYQAVNLVRKVSE-LV-----------EGEKILDMYSGVGTFGIYLAKR--GFNVKGFDSNEF 323 (425)
T ss_dssp ETTEEEEECTTSCCCSBHHHHHHHHHHHHH-HC-----------CSSEEEEETCTTTHHHHHHHHT--TCEEEEEESCHH
T ss_pred ECCEEEEEccccccccCHHHHHHHHHHhhc-cC-----------CCCEEEEeeccchHHHHHHHHc--CCEEEEEECCHH
Confidence 469999999998876422 12233344443 21 2368999999999999998874 569999999999
Q ss_pred HHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 151 ALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 151 Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
|++.|++|++.|+ +. ++++.+|.
T Consensus 324 ai~~A~~n~~~ng-l~--v~~~~~d~ 346 (425)
T 2jjq_A 324 AIEMARRNVEINN-VD--AEFEVASD 346 (425)
T ss_dssp HHHHHHHHHHHHT-CC--EEEEECCT
T ss_pred HHHHHHHHHHHcC-Cc--EEEEECCh
Confidence 9999999999996 75 89998875
No 136
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.05 E-value=1.1e-09 Score=103.39 Aligned_cols=60 Identities=17% Similarity=0.239 Sum_probs=52.9
Q ss_pred CCCeEEEECCcccHHHHHHHHHh-cCCeeEEecCcHH------HHHHHHHHHHHCCCCCCcEEEEEcc
Q 015035 115 DKVKGFDIGTGANCIYPLLGASL-LGWSFVGSDMTDV------ALEWAEKNVKSNPHISELIEIRKVD 175 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~-~~~~vvgvDis~~------Al~~A~~N~~~n~~l~~rI~~~~~d 175 (414)
...+|||||||+|.++..++... +..+++|+|+|+. +++.|+++++.++ +.++|+++..|
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~-~~~~v~~~~~d 109 (275)
T 3bkx_A 43 PGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGP-LGDRLTVHFNT 109 (275)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTST-TGGGEEEECSC
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcC-CCCceEEEECC
Confidence 34699999999999999999876 6689999999997 9999999999885 77789998876
No 137
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.05 E-value=2.8e-09 Score=97.31 Aligned_cols=156 Identities=12% Similarity=0.034 Sum_probs=102.2
Q ss_pred CCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCcccc
Q 015035 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~~~p~~~~~~~~~~~~~ 194 (414)
...+|||||||+|.++..++.+ +.+|+|+|+++.+ + + .+++++++|..+...
T Consensus 25 ~g~~VLDlG~G~G~~s~~la~~--~~~V~gvD~~~~~-----------~-~-~~v~~~~~D~~~~~~------------- 76 (191)
T 3dou_A 25 KGDAVIEIGSSPGGWTQVLNSL--ARKIISIDLQEME-----------E-I-AGVRFIRCDIFKETI------------- 76 (191)
T ss_dssp TTCEEEEESCTTCHHHHHHTTT--CSEEEEEESSCCC-----------C-C-TTCEEEECCTTSSSH-------------
T ss_pred CCCEEEEEeecCCHHHHHHHHc--CCcEEEEeccccc-----------c-C-CCeEEEEccccCHHH-------------
Confidence 3469999999999999988876 7799999999741 1 2 368899988642000
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccC--CCCcEEEEEECCCcccccccccCCCccccCCCCCc
Q 015035 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVR--DGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEE 272 (414)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~--~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~E 272 (414)
. ..+..... ..++||+|+||+|...+.... .+.
T Consensus 77 --------------------------~--------~~~~~~~~~~~~~~~D~Vlsd~~~~~~g~~~-----------~d~ 111 (191)
T 3dou_A 77 --------------------------F--------DDIDRALREEGIEKVDDVVSDAMAKVSGIPS-----------RDH 111 (191)
T ss_dssp --------------------------H--------HHHHHHHHHHTCSSEEEEEECCCCCCCSCHH-----------HHH
T ss_pred --------------------------H--------HHHHHHhhcccCCcceEEecCCCcCCCCCcc-----------cCH
Confidence 0 00001010 013899999999653221100 000
Q ss_pred ccccCChHHHHHHHHHHHHHhhccCcEEEEEeCCcCCHHHHHHHHHHcCCceEEEEEecCCC---eeEEEEEEEecccc
Q 015035 273 MVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQ---TCRWGLAWSFVPPA 348 (414)
Q Consensus 273 m~~~GGe~~Fv~rii~eS~~l~~~~~w~t~mvgk~~~l~~l~~~l~~~g~~~v~~~e~~qG~---t~Rw~lAWsf~~~~ 348 (414)
-.....+..+++.+..+++++|+|.+.+-.......+...|+. .|..|++.+...++ ...+++|-.|..++
T Consensus 112 ----~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~~~~~~~~~l~~-~F~~v~~~kP~asR~~s~E~y~v~~~~~~~~ 185 (191)
T 3dou_A 112 ----AVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGDMTNDFIAIWRK-NFSSYKISKPPASRGSSSEIYIMFFGFKAEG 185 (191)
T ss_dssp ----HHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTHHHHHHHHHGG-GEEEEEEECC------CCEEEEEEEEECCC-
T ss_pred ----HHHHHHHHHHHHHHHHHccCCCEEEEEEcCCCCHHHHHHHHHH-hcCEEEEECCCCccCCCceEEEEEeeecccc
Confidence 0023456778888899999999998877766667788888865 48889998888776 46788888887664
No 138
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.05 E-value=3.7e-10 Score=110.33 Aligned_cols=57 Identities=14% Similarity=0.094 Sum_probs=46.3
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
..+|||||||+|.++..|+.. +.+|+|+|+|+.+++.|++|++.++ + ++++++++|.
T Consensus 43 ~~~VLDiG~G~G~lt~~La~~--~~~v~~vDi~~~~~~~a~~~~~~~~-~-~~v~~~~~D~ 99 (299)
T 2h1r_A 43 SDIVLEIGCGTGNLTVKLLPL--AKKVITIDIDSRMISEVKKRCLYEG-Y-NNLEVYEGDA 99 (299)
T ss_dssp TCEEEEECCTTSTTHHHHTTT--SSEEEEECSCHHHHHHHHHHHHHTT-C-CCEEC----C
T ss_pred cCEEEEEcCcCcHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHcC-C-CceEEEECch
Confidence 468999999999999988864 5699999999999999999998875 5 5788888774
No 139
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.05 E-value=1.4e-09 Score=108.02 Aligned_cols=58 Identities=17% Similarity=0.197 Sum_probs=50.9
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
..+|||||||+|.++..+++. ...+|+|+|+++ +++.|++|++.++ +.++|+++++|.
T Consensus 65 ~~~VLDiGcGtG~ls~~la~~-g~~~v~gvD~s~-~~~~a~~~~~~~~-~~~~i~~~~~d~ 122 (340)
T 2fyt_A 65 DKVVLDVGCGTGILSMFAAKA-GAKKVLGVDQSE-ILYQAMDIIRLNK-LEDTITLIKGKI 122 (340)
T ss_dssp TCEEEEETCTTSHHHHHHHHT-TCSEEEEEESST-HHHHHHHHHHHTT-CTTTEEEEESCT
T ss_pred CCEEEEeeccCcHHHHHHHHc-CCCEEEEEChHH-HHHHHHHHHHHcC-CCCcEEEEEeeH
Confidence 468999999999999888875 345999999997 9999999999996 888999999875
No 140
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.05 E-value=4e-09 Score=100.55 Aligned_cols=73 Identities=21% Similarity=0.313 Sum_probs=56.2
Q ss_pred cHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCC---C
Q 015035 91 RSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHIS---E 167 (414)
Q Consensus 91 R~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~---~ 167 (414)
...|..++.+++... ...+|||||||+|.++..|+.. +.+|+|+|+|+.+++.|++|+.... .. .
T Consensus 42 ~~~~~~~l~~~l~~~---------~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~~-~~~~~~ 109 (293)
T 3thr_A 42 TAEYKAWLLGLLRQH---------GCHRVLDVACGTGVDSIMLVEE--GFSVTSVDASDKMLKYALKERWNRR-KEPAFD 109 (293)
T ss_dssp CHHHHHHHHHHHHHT---------TCCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTT-TSHHHH
T ss_pred HHHHHHHHHHHhccc---------CCCEEEEecCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHhhhhcc-cccccc
Confidence 466777887777642 3468999999999999988875 5699999999999999999986543 21 3
Q ss_pred cEEEEEcc
Q 015035 168 LIEIRKVD 175 (414)
Q Consensus 168 rI~~~~~d 175 (414)
++.+...|
T Consensus 110 ~~~~~~~d 117 (293)
T 3thr_A 110 KWVIEEAN 117 (293)
T ss_dssp TCEEEECC
T ss_pred eeeEeecC
Confidence 46666665
No 141
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.04 E-value=8.3e-10 Score=102.32 Aligned_cols=60 Identities=22% Similarity=0.169 Sum_probs=54.3
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
..+|||||||+|..+..++...++.+|+++|+++.+++.|++|++.++ +.++|.++.+|.
T Consensus 55 ~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~-~~~~v~~~~~d~ 114 (233)
T 2gpy_A 55 PARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALG-LESRIELLFGDA 114 (233)
T ss_dssp CSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTT-CTTTEEEECSCG
T ss_pred CCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcC-CCCcEEEEECCH
Confidence 358999999999999999998888899999999999999999999986 777899987764
No 142
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.04 E-value=5.2e-09 Score=101.82 Aligned_cols=61 Identities=15% Similarity=0.096 Sum_probs=55.0
Q ss_pred CCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
...+|||||||+|.++..++..+|+.+++++|++ .+++.|++++..++ +.++|+++..|..
T Consensus 165 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~-~~~~v~~~~~d~~ 225 (335)
T 2r3s_A 165 EPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQG-VASRYHTIAGSAF 225 (335)
T ss_dssp CCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHT-CGGGEEEEESCTT
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcC-CCcceEEEecccc
Confidence 3469999999999999999998889999999999 99999999999885 7788999988753
No 143
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.04 E-value=6.3e-09 Score=103.06 Aligned_cols=60 Identities=10% Similarity=0.096 Sum_probs=54.8
Q ss_pred CCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
...+|||||||+|.++..++...++++++++|+ +.+++.|++++..++ +.++|+++..|.
T Consensus 182 ~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~-~~~~v~~~~~d~ 241 (374)
T 1qzz_A 182 AVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAG-LADRVTVAEGDF 241 (374)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTT-CTTTEEEEECCT
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcC-CCCceEEEeCCC
Confidence 346999999999999999999889999999999 999999999999886 878999998874
No 144
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.04 E-value=2.2e-09 Score=111.88 Aligned_cols=147 Identities=11% Similarity=0.063 Sum_probs=100.1
Q ss_pred CCCeEEEECCcccHHHHHHHHHhc-CCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccc
Q 015035 115 DKVKGFDIGTGANCIYPLLGASLL-GWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQ 193 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~~-~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~~~p~~~~~~~~~~~~ 193 (414)
...+|||+|||+|..++.||...+ ..+|+|+|+|+.+++.|++|+++++ +. +|.+++.|...
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g-~~-nv~~~~~D~~~--------------- 179 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCG-IS-NVALTHFDGRV--------------- 179 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHT-CC-SEEEECCCSTT---------------
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC-CC-cEEEEeCCHHH---------------
Confidence 346899999999999999998765 4799999999999999999999986 64 58888776421
Q ss_pred cccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccccccccCCCccccCCCCCcc
Q 015035 194 DESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEM 273 (414)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em 273 (414)
+... ..++||.|+||||+.....- ...|.....-+.+.
T Consensus 180 --------------------------------------~~~~--~~~~fD~Il~D~PcSg~G~~-~~~pd~~~~~~~~~- 217 (479)
T 2frx_A 180 --------------------------------------FGAA--VPEMFDAILLDAPCSGEGVV-RKDPDALKNWSPES- 217 (479)
T ss_dssp --------------------------------------HHHH--STTCEEEEEEECCCCCGGGG-GTCTTSSSSCCHHH-
T ss_pred --------------------------------------hhhh--ccccCCEEEECCCcCCcccc-cCCHHHHhhcCHhH-
Confidence 1110 13579999999999653221 12333221111110
Q ss_pred cccCChHHHHHHHHHHHHHhhccCcEEEE---EeCCcCCHHHHHHHHHHcCC
Q 015035 274 VCSGGERAFITRIIEDSVALKQTFRWYTS---MVGRKSNLKFLISKLRKVGV 322 (414)
Q Consensus 274 ~~~GGe~~Fv~rii~eS~~l~~~~~w~t~---mvgk~~~l~~l~~~l~~~g~ 322 (414)
+. +-..+..++++++..+++++|.+.. -+...++-..+...|++++-
T Consensus 218 ~~--~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~~~Ene~vv~~~l~~~~~ 267 (479)
T 2frx_A 218 NQ--EIAATQRELIDSAFHALRPGGTLVYSTCTLNQEENEAVCLWLKETYPD 267 (479)
T ss_dssp HH--HHHHHHHHHHHHHHHHEEEEEEEEEEESCCSSTTTHHHHHHHHHHSTT
T ss_pred HH--HHHHHHHHHHHHHHHhcCCCCEEEEecccCCcccCHHHHHHHHHHCCC
Confidence 00 0123456789999998888887533 35556677777777888763
No 145
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.04 E-value=6.2e-10 Score=112.69 Aligned_cols=59 Identities=17% Similarity=0.011 Sum_probs=52.3
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHC---------------CCCCCcEEEEEccC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSN---------------PHISELIEIRKVDN 176 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n---------------~~l~~rI~~~~~d~ 176 (414)
+.+|||+|||+|++++.++.+.++.+|+++|+|+.+++.|++|++.| + +.+ +++++.|.
T Consensus 48 ~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~g-l~~-i~v~~~Da 121 (378)
T 2dul_A 48 PKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKG-EKT-IVINHDDA 121 (378)
T ss_dssp CSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEES-SSE-EEEEESCH
T ss_pred CCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccC-CCc-eEEEcCcH
Confidence 35899999999999999998877789999999999999999999998 5 644 88888774
No 146
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.03 E-value=5.9e-09 Score=92.89 Aligned_cols=57 Identities=21% Similarity=0.256 Sum_probs=49.4
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
+.+|||||||+|.++..++.. +.+++|+|+|+.+++.|++++..++ + .+++++..|.
T Consensus 33 ~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~-~-~~~~~~~~d~ 89 (199)
T 2xvm_A 33 PGKTLDLGCGNGRNSLYLAAN--GYDVDAWDKNAMSIANVERIKSIEN-L-DNLHTRVVDL 89 (199)
T ss_dssp SCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHT-C-TTEEEEECCG
T ss_pred CCeEEEEcCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhCC-C-CCcEEEEcch
Confidence 459999999999999988875 6799999999999999999998875 5 3588888764
No 147
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.03 E-value=8.4e-10 Score=101.53 Aligned_cols=60 Identities=17% Similarity=0.112 Sum_probs=54.1
Q ss_pred CCeEEEECCcccHHHHHHHHHhc-CCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLL-GWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~-~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
..+|||||||+|..++.++...+ +.+++++|+++.+++.|++|++.++ +.++|+++.+|.
T Consensus 70 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g-~~~~i~~~~~d~ 130 (229)
T 2avd_A 70 AKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAE-AEHKIDLRLKPA 130 (229)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTT-CTTTEEEEESCH
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCC-CCCeEEEEEcCH
Confidence 46899999999999999998776 7899999999999999999999986 778899998873
No 148
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=99.03 E-value=9e-10 Score=116.51 Aligned_cols=152 Identities=13% Similarity=0.093 Sum_probs=91.7
Q ss_pred CeEEEECCcccHHHHHHHHHhc---------------CCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCC
Q 015035 117 VKGFDIGTGANCIYPLLGASLL---------------GWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTP 181 (414)
Q Consensus 117 ~~vLDIGtGsG~I~i~La~~~~---------------~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~~~p 181 (414)
.+|||.|||||.+.+.++.... ...++|+|+++.++++|+.|+..++ +...|.++++|...
T Consensus 246 ~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~g-i~~~i~i~~gDtL~--- 321 (544)
T 3khk_A 246 GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRG-IDFNFGKKNADSFL--- 321 (544)
T ss_dssp EEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTT-CCCBCCSSSCCTTT---
T ss_pred CeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhC-CCcccceeccchhc---
Confidence 4899999999998877654332 4689999999999999999999886 65544434444221
Q ss_pred cccccccCCccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCccccccc---c
Q 015035 182 SIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEE---A 258 (414)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~~s~ee---~ 258 (414)
.. .....+||+|||||||...... .
T Consensus 322 ---------------------------------------------------~~-~~~~~~fD~Iv~NPPf~~~~~~~~~~ 349 (544)
T 3khk_A 322 ---------------------------------------------------DD-QHPDLRADFVMTNPPFNMKDWWHEKL 349 (544)
T ss_dssp ---------------------------------------------------SC-SCTTCCEEEEEECCCSSCCSCCCGGG
T ss_pred ---------------------------------------------------Cc-ccccccccEEEECCCcCCccccchhh
Confidence 00 0124689999999999753211 1
Q ss_pred cCCCccccCCCCCcc---c--ccCChHHHHHHHHHHHHHhhccCcEEEEEeCC-----c-CCHHHHHHHHHHcCCceEEE
Q 015035 259 GLNPKTSCGGTPEEM---V--CSGGERAFITRIIEDSVALKQTFRWYTSMVGR-----K-SNLKFLISKLRKVGVTIVKT 327 (414)
Q Consensus 259 ~~~P~~a~~g~~~Em---~--~~GGe~~Fv~rii~eS~~l~~~~~w~t~mvgk-----~-~~l~~l~~~l~~~g~~~v~~ 327 (414)
...++... |...+. + ...+.+.|+..++ .+++++|...+.+.. . .....+.+.|-+.+. ...+
T Consensus 350 ~~d~r~~~-g~~~~~~~~~~~~~~~~~~Fl~~~l----~~Lk~gGr~aiVlP~g~L~~~~~~~~~iRk~Lle~~~-l~aI 423 (544)
T 3khk_A 350 ADDPRWTI-NTNGEKRILTPPTGNANFAWMLHML----YHLAPTGSMALLLANGSMSSNTNNEGEIRKTLVEQDL-VECM 423 (544)
T ss_dssp TTCGGGEE-CCC--CEECCCCTTCTHHHHHHHHH----HTEEEEEEEEEEEETHHHHCCGGGHHHHHHHHHHTTC-EEEE
T ss_pred hhhhhhhc-CcccccccccCCCcchhHHHHHHHH----HHhccCceEEEEecchhhhcCcchHHHHHHHHHhCCc-HhEE
Confidence 11222221 100000 1 1123566766654 466777766555531 1 345788888877764 2334
Q ss_pred EEe
Q 015035 328 TEF 330 (414)
Q Consensus 328 ~e~ 330 (414)
+.+
T Consensus 424 I~L 426 (544)
T 3khk_A 424 VAL 426 (544)
T ss_dssp EEC
T ss_pred EEC
Confidence 443
No 149
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.03 E-value=1.7e-09 Score=107.63 Aligned_cols=59 Identities=19% Similarity=0.288 Sum_probs=51.9
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
..+|||||||+|.++..++.. +..+|+|+|+|+ +++.|+++++.++ +.++|+++++|..
T Consensus 67 ~~~VLDvGcG~G~~~~~la~~-g~~~v~gvD~s~-~l~~a~~~~~~~~-~~~~v~~~~~d~~ 125 (349)
T 3q7e_A 67 DKVVLDVGSGTGILCMFAAKA-GARKVIGIECSS-ISDYAVKIVKANK-LDHVVTIIKGKVE 125 (349)
T ss_dssp TCEEEEESCTTSHHHHHHHHT-TCSEEEEEECST-HHHHHHHHHHHTT-CTTTEEEEESCTT
T ss_pred CCEEEEEeccchHHHHHHHHC-CCCEEEEECcHH-HHHHHHHHHHHcC-CCCcEEEEECcHH
Confidence 468999999999999888875 456999999995 9999999999996 8889999998853
No 150
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.03 E-value=7.5e-10 Score=112.80 Aligned_cols=60 Identities=22% Similarity=0.083 Sum_probs=53.4
Q ss_pred CCeEEEECCcccHHHHHHHHHhcC-CeeEEecCcHHHHHHHHHHHHHCCCCCCc-EEEEEccC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLG-WSFVGSDMTDVALEWAEKNVKSNPHISEL-IEIRKVDN 176 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~-~~vvgvDis~~Al~~A~~N~~~n~~l~~r-I~~~~~d~ 176 (414)
+.+|||++||+|.+++.++++..+ .+|+++|+|+.|++.|++|++.|+ ++++ +++++.|.
T Consensus 53 g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ng-l~~~~v~v~~~Da 114 (392)
T 3axs_A 53 PVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNN-IPEDRYEIHGMEA 114 (392)
T ss_dssp CEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTT-CCGGGEEEECSCH
T ss_pred CCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhC-CCCceEEEEeCCH
Confidence 358999999999999999987665 589999999999999999999996 8877 99988774
No 151
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.03 E-value=4.3e-09 Score=98.92 Aligned_cols=52 Identities=15% Similarity=0.086 Sum_probs=44.2
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
..+|||||||+|.++..|+.. +.+++|+|+|+.+++.|+++.. ++.++.+|.
T Consensus 51 ~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~-------~~~~~~~d~ 102 (263)
T 3pfg_A 51 AASLLDVACGTGMHLRHLADS--FGTVEGLELSADMLAIARRRNP-------DAVLHHGDM 102 (263)
T ss_dssp CCEEEEETCTTSHHHHHHTTT--SSEEEEEESCHHHHHHHHHHCT-------TSEEEECCT
T ss_pred CCcEEEeCCcCCHHHHHHHHc--CCeEEEEECCHHHHHHHHhhCC-------CCEEEECCh
Confidence 468999999999999888765 4689999999999999998753 477888775
No 152
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.02 E-value=4.6e-09 Score=97.77 Aligned_cols=58 Identities=17% Similarity=0.220 Sum_probs=49.4
Q ss_pred CCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
...+|||||||+|.++..++... .+++|+|+++.+++.|+++++.++ +. ++.++..|.
T Consensus 21 ~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~~-~~-~v~~~~~d~ 78 (239)
T 1xxl_A 21 AEHRVLDIGAGAGHTALAFSPYV--QECIGVDATKEMVEVASSFAQEKG-VE-NVRFQQGTA 78 (239)
T ss_dssp TTCEEEEESCTTSHHHHHHGGGS--SEEEEEESCHHHHHHHHHHHHHHT-CC-SEEEEECBT
T ss_pred CCCEEEEEccCcCHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHHHcC-CC-CeEEEeccc
Confidence 34699999999999998888654 499999999999999999998875 53 688888774
No 153
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.02 E-value=1.9e-09 Score=97.70 Aligned_cols=41 Identities=22% Similarity=0.307 Sum_probs=37.3
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHH
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKN 158 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N 158 (414)
+.+|||||||+|.++..++.. +.+++|+|+++.+++.|+++
T Consensus 53 ~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~ 93 (227)
T 3e8s_A 53 PERVLDLGCGEGWLLRALADR--GIEAVGVDGDRTLVDAARAA 93 (227)
T ss_dssp CSEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHT
T ss_pred CCEEEEeCCCCCHHHHHHHHC--CCEEEEEcCCHHHHHHHHHh
Confidence 469999999999999888875 77999999999999999987
No 154
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.02 E-value=7.6e-10 Score=106.30 Aligned_cols=70 Identities=13% Similarity=0.106 Sum_probs=55.3
Q ss_pred hHHHHHHHHHccCCCCCCCCCCCCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEE
Q 015035 93 NYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIR 172 (414)
Q Consensus 93 ~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~ 172 (414)
+.+..|.+.+.. ....+|||||||+|.++..|+.+ +.+|+|+|+|+++++.|++++... ++++++
T Consensus 16 ~i~~~iv~~~~~---------~~~~~VLEIG~G~G~lt~~La~~--~~~V~avEid~~~~~~~~~~~~~~----~~v~~i 80 (255)
T 3tqs_A 16 FVLQKIVSAIHP---------QKTDTLVEIGPGRGALTDYLLTE--CDNLALVEIDRDLVAFLQKKYNQQ----KNITIY 80 (255)
T ss_dssp HHHHHHHHHHCC---------CTTCEEEEECCTTTTTHHHHTTT--SSEEEEEECCHHHHHHHHHHHTTC----TTEEEE
T ss_pred HHHHHHHHhcCC---------CCcCEEEEEcccccHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHhhC----CCcEEE
Confidence 345555565543 13468999999999999998875 369999999999999999998652 469999
Q ss_pred EccCC
Q 015035 173 KVDNS 177 (414)
Q Consensus 173 ~~d~~ 177 (414)
++|..
T Consensus 81 ~~D~~ 85 (255)
T 3tqs_A 81 QNDAL 85 (255)
T ss_dssp ESCTT
T ss_pred EcchH
Confidence 99864
No 155
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.02 E-value=2.4e-09 Score=98.43 Aligned_cols=94 Identities=12% Similarity=0.157 Sum_probs=69.8
Q ss_pred hcCCcEEEecCCCeeCCCCCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCcccHHHHHHHHHh-----cCCeeEEe
Q 015035 71 HDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASL-----LGWSFVGS 145 (414)
Q Consensus 71 ~~fgl~~~vp~gvLiPriP~R~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~i~La~~~-----~~~~vvgv 145 (414)
.+++..+.+..+..++. | ....++.+++... + ....+|||||||+|.++..++... +..+|+|+
T Consensus 47 ~y~d~~~~~~~~~~~~~-p---~~~~~~~~~l~~~-~------~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~v 115 (227)
T 2pbf_A 47 PYIDTPVYISHGVTISA-P---HMHALSLKRLINV-L------KPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGL 115 (227)
T ss_dssp TTSSSCEEEETTEEECC-H---HHHHHHHHHHTTT-S------CTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEE
T ss_pred cCCCCccccCCCCccCC-h---HHHHHHHHHHHhh-C------CCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEE
Confidence 35666778888888876 3 2334444555321 1 134699999999999999988865 45799999
Q ss_pred cCcHHHHHHHHHHHHHCCCC----CCcEEEEEccC
Q 015035 146 DMTDVALEWAEKNVKSNPHI----SELIEIRKVDN 176 (414)
Q Consensus 146 Dis~~Al~~A~~N~~~n~~l----~~rI~~~~~d~ 176 (414)
|+++.+++.|++|++.++ + ..+++++..|.
T Consensus 116 D~~~~~~~~a~~~~~~~~-~~~~~~~~v~~~~~d~ 149 (227)
T 2pbf_A 116 ERVKDLVNFSLENIKRDK-PELLKIDNFKIIHKNI 149 (227)
T ss_dssp ESCHHHHHHHHHHHHHHC-GGGGSSTTEEEEECCG
T ss_pred eCCHHHHHHHHHHHHHcC-ccccccCCEEEEECCh
Confidence 999999999999998874 3 45789888774
No 156
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.02 E-value=2.9e-09 Score=109.68 Aligned_cols=147 Identities=14% Similarity=0.065 Sum_probs=100.0
Q ss_pred CCeEEEECCcccHHHHHHHHHhcC-CeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCcccc
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLG-WSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~-~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~~~p~~~~~~~~~~~~~ 194 (414)
+.+|||+|||+|..+..|+...++ .+|+|+|+++.+++.+++|+++++ +. +|.+++.|....
T Consensus 260 g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g-~~-~v~~~~~D~~~~--------------- 322 (450)
T 2yxl_A 260 GETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMG-IK-IVKPLVKDARKA--------------- 322 (450)
T ss_dssp TCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTT-CC-SEEEECSCTTCC---------------
T ss_pred cCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcC-CC-cEEEEEcChhhc---------------
Confidence 468999999999999999988776 799999999999999999999986 63 588887764310
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccccccccCCCccccCCCCCccc
Q 015035 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMV 274 (414)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em~ 274 (414)
...+ .+++||+|++|||+.....- ...|......+...+.
T Consensus 323 -------------------------------------~~~~--~~~~fD~Vl~D~Pcsg~g~~-~~~pd~~~~~~~~~~~ 362 (450)
T 2yxl_A 323 -------------------------------------PEII--GEEVADKVLLDAPCTSSGTI-GKNPELRWRLREDKIN 362 (450)
T ss_dssp -------------------------------------SSSS--CSSCEEEEEEECCCCCGGGT-TTSTTHHHHCCTTSHH
T ss_pred -------------------------------------chhh--ccCCCCEEEEcCCCCCCeee-ccChhhhhhCCHHHHH
Confidence 0000 13579999999999654321 1233322111111000
Q ss_pred ccCChH-HHHHHHHHHHHHhhccCcEEE---EEeCCcCCHHHHHHHHHHc-CCc
Q 015035 275 CSGGER-AFITRIIEDSVALKQTFRWYT---SMVGRKSNLKFLISKLRKV-GVT 323 (414)
Q Consensus 275 ~~GGe~-~Fv~rii~eS~~l~~~~~w~t---~mvgk~~~l~~l~~~l~~~-g~~ 323 (414)
++ ..-..+++.+..+++++|.+. +.+...++...+...|+++ ++.
T Consensus 363 ----~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~~~ene~~v~~~l~~~~~~~ 412 (450)
T 2yxl_A 363 ----EMSQLQRELLESAARLVKPGGRLLYTTCSIFKEENEKNIRWFLNVHPEFK 412 (450)
T ss_dssp ----HHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTHHHHHHHHHHCSSCE
T ss_pred ----HHHHHHHHHHHHHHHhcCCCcEEEEEeCCCChhhHHHHHHHHHHhCCCCE
Confidence 11 223678888888888888754 2344455777777888887 454
No 157
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.02 E-value=7.2e-09 Score=101.84 Aligned_cols=120 Identities=12% Similarity=0.069 Sum_probs=86.9
Q ss_pred CCeEEEECCcccHHHHHHHHHh-cCCeeEEecCcHHHHHHHHHHHHH-------CCCC---CCcEEEEEccCCCCCCccc
Q 015035 116 KVKGFDIGTGANCIYPLLGASL-LGWSFVGSDMTDVALEWAEKNVKS-------NPHI---SELIEIRKVDNSESTPSIQ 184 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~-~~~~vvgvDis~~Al~~A~~N~~~-------n~~l---~~rI~~~~~d~~~~~p~~~ 184 (414)
..+|||+|||+|.++..++... +..+|+|+|+++.+++.|++|++. |+ + .++|+++..|..+.
T Consensus 106 g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~-~~~~~~~v~~~~~d~~~~----- 179 (336)
T 2b25_A 106 GDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSH-VEEWPDNVDFIHKDISGA----- 179 (336)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTC-SSCCCCCEEEEESCTTCC-----
T ss_pred CCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhccccccc-ccccCCceEEEECChHHc-----
Confidence 4689999999999999998874 558999999999999999999985 32 3 35799988875320
Q ss_pred ccccCCccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccccccccCCCcc
Q 015035 185 ESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKT 264 (414)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~ 264 (414)
...+ .+++||+|+||+|-. ..
T Consensus 180 -----------------------------------------------~~~~--~~~~fD~V~~~~~~~----------~~ 200 (336)
T 2b25_A 180 -----------------------------------------------TEDI--KSLTFDAVALDMLNP----------HV 200 (336)
T ss_dssp -----------------------------------------------C---------EEEEEECSSST----------TT
T ss_pred -----------------------------------------------cccc--CCCCeeEEEECCCCH----------HH
Confidence 0011 135799999998621 00
Q ss_pred ccCCCCCcccccCChHHHHHHHHHHHHHhhccCcEEEEEeCCcCCHHHHHHHHHHcC
Q 015035 265 SCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVG 321 (414)
Q Consensus 265 a~~g~~~Em~~~GGe~~Fv~rii~eS~~l~~~~~w~t~mvgk~~~l~~l~~~l~~~g 321 (414)
++++...+++++|++.+..+...++..+.+.|++.+
T Consensus 201 ---------------------~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~~ 236 (336)
T 2b25_A 201 ---------------------TLPVFYPHLKHGGVCAVYVVNITQVIELLDGIRTCE 236 (336)
T ss_dssp ---------------------THHHHGGGEEEEEEEEEEESSHHHHHHHHHHHHHHT
T ss_pred ---------------------HHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhcC
Confidence 345566678888888877776777888888887644
No 158
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.02 E-value=3.8e-09 Score=97.25 Aligned_cols=54 Identities=19% Similarity=0.215 Sum_probs=44.9
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCC-eeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGW-SFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~-~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
..+|||||||+|.++..++.. +. +++|+|+|+.+++.|+++...+ ++.++..|.
T Consensus 44 ~~~vLdiG~G~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~d~ 98 (243)
T 3bkw_A 44 GLRIVDLGCGFGWFCRWAHEH--GASYVLGLDLSEKMLARARAAGPDT-----GITYERADL 98 (243)
T ss_dssp TCEEEEETCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHTSCSS-----SEEEEECCG
T ss_pred CCEEEEEcCcCCHHHHHHHHC--CCCeEEEEcCCHHHHHHHHHhcccC-----CceEEEcCh
Confidence 468999999999999888875 44 9999999999999999886432 588887764
No 159
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.02 E-value=2.7e-09 Score=105.26 Aligned_cols=58 Identities=21% Similarity=0.243 Sum_probs=50.5
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
..+|||||||+|.++..+++. +..+|+|+|++ .+++.|+++++.++ +.++|+++++|.
T Consensus 39 ~~~VLDiGcGtG~ls~~la~~-g~~~v~~vD~s-~~~~~a~~~~~~~~-~~~~i~~~~~d~ 96 (328)
T 1g6q_1 39 DKIVLDVGCGTGILSMFAAKH-GAKHVIGVDMS-SIIEMAKELVELNG-FSDKITLLRGKL 96 (328)
T ss_dssp TCEEEEETCTTSHHHHHHHHT-CCSEEEEEESS-THHHHHHHHHHHTT-CTTTEEEEESCT
T ss_pred CCEEEEecCccHHHHHHHHHC-CCCEEEEEChH-HHHHHHHHHHHHcC-CCCCEEEEECch
Confidence 368999999999999887764 44599999999 59999999999996 888999999875
No 160
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=99.01 E-value=4.9e-11 Score=114.69 Aligned_cols=58 Identities=12% Similarity=0.067 Sum_probs=51.6
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcH-------HHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTD-------VALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~-------~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
..+|||+|||+|.+++.||.. +.+|+|+|+|+ .+++.|++|++.|+ +.++|+++++|.
T Consensus 84 ~~~VLDlgcG~G~~a~~lA~~--g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~-~~~ri~~~~~d~ 148 (258)
T 2r6z_A 84 HPTVWDATAGLGRDSFVLASL--GLTVTAFEQHPAVACLLSDGIRRALLNPETQD-TAARINLHFGNA 148 (258)
T ss_dssp CCCEEETTCTTCHHHHHHHHT--TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHH-HHTTEEEEESCH
T ss_pred cCeEEEeeCccCHHHHHHHHh--CCEEEEEECChhhhHHHHHHHHHHHhHHHhhC-CccCeEEEECCH
Confidence 358999999999999998874 67999999999 99999999999885 777899998874
No 161
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.00 E-value=1.1e-09 Score=106.27 Aligned_cols=58 Identities=14% Similarity=0.177 Sum_probs=50.9
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
..+|||||||+|.+...|+.. +.+|+|+|+|+.+++.|++++..++ +.++++++++|.
T Consensus 29 ~~~VLDiG~G~G~lt~~L~~~--~~~v~~vD~~~~~~~~a~~~~~~~~-~~~~v~~~~~D~ 86 (285)
T 1zq9_A 29 TDVVLEVGPGTGNMTVKLLEK--AKKVVACELDPRLVAELHKRVQGTP-VASKLQVLVGDV 86 (285)
T ss_dssp TCEEEEECCTTSTTHHHHHHH--SSEEEEEESCHHHHHHHHHHHTTST-TGGGEEEEESCT
T ss_pred CCEEEEEcCcccHHHHHHHhh--CCEEEEEECCHHHHHHHHHHHHhcC-CCCceEEEEcce
Confidence 468999999999999998875 4699999999999999999998775 656899999875
No 162
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.00 E-value=2.4e-09 Score=107.70 Aligned_cols=59 Identities=17% Similarity=0.201 Sum_probs=51.5
Q ss_pred CCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
...+|||||||+|.+++.++.. ...+|+|+|++ .+++.|+++++.++ +.++|+++++|.
T Consensus 63 ~~~~VLDlGcGtG~ls~~la~~-g~~~V~gvD~s-~~~~~a~~~~~~~~-~~~~v~~~~~d~ 121 (376)
T 3r0q_C 63 EGKTVLDVGTGSGILAIWSAQA-GARKVYAVEAT-KMADHARALVKANN-LDHIVEVIEGSV 121 (376)
T ss_dssp TTCEEEEESCTTTHHHHHHHHT-TCSEEEEEESS-TTHHHHHHHHHHTT-CTTTEEEEESCG
T ss_pred CCCEEEEeccCcCHHHHHHHhc-CCCEEEEEccH-HHHHHHHHHHHHcC-CCCeEEEEECch
Confidence 3468999999999999888875 22399999999 99999999999996 888999999874
No 163
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.00 E-value=4.1e-09 Score=101.36 Aligned_cols=63 Identities=16% Similarity=0.215 Sum_probs=54.3
Q ss_pred CCCeEEEECCcccHHHHHHHHHh-cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 115 DKVKGFDIGTGANCIYPLLGASL-LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~-~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
...+|||||||+|..+..|+..+ ++.+|+|+|+|+.+++.|+++++.+++...++++++.|..
T Consensus 36 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~ 99 (299)
T 3g5t_A 36 ERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSD 99 (299)
T ss_dssp CCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTT
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHH
Confidence 34699999999999999999876 7899999999999999999999886114578999998853
No 164
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=98.99 E-value=5e-09 Score=90.46 Aligned_cols=149 Identities=10% Similarity=-0.011 Sum_probs=97.3
Q ss_pred CCeEEEECCcccHHHHHHHHHh-cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCcccc
Q 015035 116 KVKGFDIGTGANCIYPLLGASL-LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~-~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~~~p~~~~~~~~~~~~~ 194 (414)
..+|||+|||+|.++..++... ++.+++|+|+++ +++. .+++++..|..+.
T Consensus 23 ~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~------------~~~~~~~~d~~~~--------------- 74 (180)
T 1ej0_A 23 GMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI------------VGVDFLQGDFRDE--------------- 74 (180)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC------------TTEEEEESCTTSH---------------
T ss_pred CCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc------------CcEEEEEcccccc---------------
Confidence 4699999999999999998875 568999999999 6432 3578887764310
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCc---cccccCCCCcEEEEEECCCcccccccccCCCccccCCCCC
Q 015035 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPV---LVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPE 271 (414)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i---l~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~ 271 (414)
+. +... ..+++||+|+||+|+........ +.
T Consensus 75 -----------------------------------~~~~~~~~~-~~~~~~D~i~~~~~~~~~~~~~~----------~~ 108 (180)
T 1ej0_A 75 -----------------------------------LVMKALLER-VGDSKVQVVMSDMAPNMSGTPAV----------DI 108 (180)
T ss_dssp -----------------------------------HHHHHHHHH-HTTCCEEEEEECCCCCCCSCHHH----------HH
T ss_pred -----------------------------------hhhhhhhcc-CCCCceeEEEECCCccccCCCcc----------ch
Confidence 00 0000 12468999999999864321000 00
Q ss_pred cccccCChHHHHHHHHHHHHHhhccCcEEEEEeCCcCCHHHHHHHHHHcCCceEEEEEecCCC---eeEEEEEEEe
Q 015035 272 EMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQ---TCRWGLAWSF 344 (414)
Q Consensus 272 Em~~~GGe~~Fv~rii~eS~~l~~~~~w~t~mvgk~~~l~~l~~~l~~~g~~~v~~~e~~qG~---t~Rw~lAWsf 344 (414)
. -...+...++++...+++++|++.+......+...+...+++. +..+.+.+...++ ...|+++-.|
T Consensus 109 ~-----~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (180)
T 1ej0_A 109 P-----RAMYLVELALEMCRDVLAPGGSFVVKVFQGEGFDEYLREIRSL-FTKVKVRKPDSSRARSREVYIVATGR 178 (180)
T ss_dssp H-----HHHHHHHHHHHHHHHHEEEEEEEEEEEESSTTHHHHHHHHHHH-EEEEEEECCTTSCTTCCEEEEEEEEE
T ss_pred H-----HHHHHHHHHHHHHHHHcCCCcEEEEEEecCCcHHHHHHHHHHh-hhhEEeecCCcccccCceEEEEEccC
Confidence 0 0123457788888888999998877666677888888888885 6666665444332 2455555443
No 165
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=98.99 E-value=6.9e-09 Score=94.12 Aligned_cols=58 Identities=16% Similarity=0.140 Sum_probs=51.0
Q ss_pred CCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
...+|||||||+|.++..++.. +.+++|+|+++.+++.|++|++.++ +. +++++..|.
T Consensus 77 ~~~~vLdiG~G~G~~~~~la~~--~~~v~~vD~~~~~~~~a~~~~~~~~-~~-~v~~~~~d~ 134 (210)
T 3lbf_A 77 PQSRVLEIGTGSGYQTAILAHL--VQHVCSVERIKGLQWQARRRLKNLD-LH-NVSTRHGDG 134 (210)
T ss_dssp TTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHHHHHHHTT-CC-SEEEEESCG
T ss_pred CCCEEEEEcCCCCHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcC-CC-ceEEEECCc
Confidence 3468999999999999988876 6799999999999999999999885 64 699988874
No 166
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.99 E-value=1.8e-09 Score=104.42 Aligned_cols=132 Identities=13% Similarity=0.066 Sum_probs=88.7
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHC-CCC--------CCcEEEEEccCCCCCCccccc
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSN-PHI--------SELIEIRKVDNSESTPSIQES 186 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n-~~l--------~~rI~~~~~d~~~~~p~~~~~ 186 (414)
+.+|||||||+|.++..+++. +..+++++|+|+.+++.|++|+ .. +.+ ..+++++.+|..+
T Consensus 76 ~~~VLdiG~G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~-------- 145 (281)
T 1mjf_A 76 PKRVLVIGGGDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFE-------- 145 (281)
T ss_dssp CCEEEEEECTTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHH--------
T ss_pred CCeEEEEcCCcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHH--------
Confidence 468999999999999998886 7779999999999999999998 32 112 3578988876321
Q ss_pred ccCCccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccccccccCCCcccc
Q 015035 187 LTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSC 266 (414)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~ 266 (414)
++. . .++||+|++|+|+... |
T Consensus 146 --------------------------------------------~l~---~-~~~fD~Ii~d~~~~~~-------~---- 166 (281)
T 1mjf_A 146 --------------------------------------------FIK---N-NRGFDVIIADSTDPVG-------P---- 166 (281)
T ss_dssp --------------------------------------------HHH---H-CCCEEEEEEECCCCC-------------
T ss_pred --------------------------------------------Hhc---c-cCCeeEEEECCCCCCC-------c----
Confidence 111 1 3679999999985210 1
Q ss_pred CCCCCcccccCChHHHHHHHHHHHHHhhccCcEEEEEeCCc----CCHHHHHHHHHHcCCceEEEE
Q 015035 267 GGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRK----SNLKFLISKLRKVGVTIVKTT 328 (414)
Q Consensus 267 ~g~~~Em~~~GGe~~Fv~rii~eS~~l~~~~~w~t~mvgk~----~~l~~l~~~l~~~g~~~v~~~ 328 (414)
.. . .+...+++....+++++|++.+..+.. ..+..+.+.+++. +..+...
T Consensus 167 ---~~-------~-l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~-f~~v~~~ 220 (281)
T 1mjf_A 167 ---AK-------V-LFSEEFYRYVYDALNNPGIYVTQAGSVYLFTDELISAYKEMKKV-FDRVYYY 220 (281)
T ss_dssp --------------TTSHHHHHHHHHHEEEEEEEEEEEEETTTSHHHHHHHHHHHHHH-CSEEEEE
T ss_pred ---ch-------h-hhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHH-CCceEEE
Confidence 11 1 123345556667889999987766532 2345556666665 5555543
No 167
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.98 E-value=9.8e-09 Score=95.52 Aligned_cols=72 Identities=21% Similarity=0.336 Sum_probs=55.9
Q ss_pred HHHHHHHHHccCCCCCCCCCCCCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEE
Q 015035 94 YIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRK 173 (414)
Q Consensus 94 yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~ 173 (414)
.+.++.+++..... ....+|||||||+|.++..|+.. +.+++|+|+|+.+++.|++++..++ + ++.+++
T Consensus 26 ~~~~~~~~~~~~~~------~~~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~~-~--~v~~~~ 94 (252)
T 1wzn_A 26 EIDFVEEIFKEDAK------REVRRVLDLACGTGIPTLELAER--GYEVVGLDLHEEMLRVARRKAKERN-L--KIEFLQ 94 (252)
T ss_dssp HHHHHHHHHHHTCS------SCCCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTT-C--CCEEEE
T ss_pred HHHHHHHHHHHhcc------cCCCEEEEeCCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhcC-C--ceEEEE
Confidence 34556666654211 23469999999999999988874 6799999999999999999998875 4 588888
Q ss_pred ccC
Q 015035 174 VDN 176 (414)
Q Consensus 174 ~d~ 176 (414)
+|.
T Consensus 95 ~d~ 97 (252)
T 1wzn_A 95 GDV 97 (252)
T ss_dssp SCG
T ss_pred CCh
Confidence 764
No 168
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=98.97 E-value=3.3e-08 Score=89.26 Aligned_cols=53 Identities=13% Similarity=0.140 Sum_probs=45.1
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
..+|||||||+|.++..++.. +.+++|+|+++.+++.|++ ++ + .+++++..|.
T Consensus 47 ~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~s~~~~~~a~~----~~-~-~~~~~~~~d~ 99 (218)
T 3ou2_A 47 RGDVLELASGTGYWTRHLSGL--ADRVTALDGSAEMIAEAGR----HG-L-DNVEFRQQDL 99 (218)
T ss_dssp CSEEEEESCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHGG----GC-C-TTEEEEECCT
T ss_pred CCeEEEECCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHh----cC-C-CCeEEEeccc
Confidence 359999999999999988876 6799999999999999988 32 3 4689988875
No 169
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.97 E-value=4.3e-09 Score=107.59 Aligned_cols=146 Identities=12% Similarity=0.016 Sum_probs=100.4
Q ss_pred CCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCcccc
Q 015035 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~~~p~~~~~~~~~~~~~ 194 (414)
.+.+|||+|||+|..+..++...++.+|+|+|+++.+++.+++|+++++ + .+.+++.|..+
T Consensus 246 ~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g-~--~~~~~~~D~~~---------------- 306 (429)
T 1sqg_A 246 NGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLG-M--KATVKQGDGRY---------------- 306 (429)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTT-C--CCEEEECCTTC----------------
T ss_pred CcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcC-C--CeEEEeCchhh----------------
Confidence 3468999999999999999998877899999999999999999999986 5 37787776431
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccccccccCCCccccCCCCCccc
Q 015035 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMV 274 (414)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em~ 274 (414)
+.... ..++||+|++|||+.....- ...|......+..++.
T Consensus 307 ------------------------------------~~~~~--~~~~fD~Vl~D~Pcsg~g~~-~~~p~~~~~~~~~~~~ 347 (429)
T 1sqg_A 307 ------------------------------------PSQWC--GEQQFDRILLDAPCSATGVI-RRHPDIKWLRRDRDIP 347 (429)
T ss_dssp ------------------------------------THHHH--TTCCEEEEEEECCCCCGGGT-TTCTTHHHHCCTTHHH
T ss_pred ------------------------------------chhhc--ccCCCCEEEEeCCCCccccc-CCCcchhhcCCHHHHH
Confidence 00001 23589999999999754321 2234322211121000
Q ss_pred ccCChHHHHHHHHHHHHHhhccCcEEEE---EeCCcCCHHHHHHHHHHcC
Q 015035 275 CSGGERAFITRIIEDSVALKQTFRWYTS---MVGRKSNLKFLISKLRKVG 321 (414)
Q Consensus 275 ~~GGe~~Fv~rii~eS~~l~~~~~w~t~---mvgk~~~l~~l~~~l~~~g 321 (414)
+-..+...+++.+..+++++|++.. -+...++...+...|++++
T Consensus 348 ---~l~~~q~~~L~~a~~~LkpGG~lvystcs~~~~ene~~v~~~l~~~~ 394 (429)
T 1sqg_A 348 ---ELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTA 394 (429)
T ss_dssp ---HHHHHHHHHHHHHGGGEEEEEEEEEEESCCCGGGTHHHHHHHHHHCT
T ss_pred ---HHHHHHHHHHHHHHHhcCCCCEEEEEECCCChhhHHHHHHHHHHhCC
Confidence 0123557888888888888887543 2344567777888888764
No 170
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=98.96 E-value=8.3e-09 Score=93.91 Aligned_cols=53 Identities=15% Similarity=0.124 Sum_probs=44.6
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
..+|||||||+|.+...|+.. +.+++|+|+++.+++.|++++. .+++++.+|.
T Consensus 46 ~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~------~~~~~~~~d~ 98 (220)
T 3hnr_A 46 FGNVLEFGVGTGNLTNKLLLA--GRTVYGIEPSREMRMIAKEKLP------KEFSITEGDF 98 (220)
T ss_dssp CSEEEEECCTTSHHHHHHHHT--TCEEEEECSCHHHHHHHHHHSC------TTCCEESCCS
T ss_pred CCeEEEeCCCCCHHHHHHHhC--CCeEEEEeCCHHHHHHHHHhCC------CceEEEeCCh
Confidence 468999999999999888875 6799999999999999998865 2466776654
No 171
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=98.96 E-value=5.7e-10 Score=105.50 Aligned_cols=60 Identities=13% Similarity=0.065 Sum_probs=54.7
Q ss_pred CCeEEEECCcccHHHHHHHHHhc-CCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLL-GWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~-~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
..+|||||||+|..++.|+...+ +.+|+++|+++.+++.|++|++.++ +.++|+++.+|.
T Consensus 61 ~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g-~~~~i~~~~gda 121 (242)
T 3r3h_A 61 AKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAK-QEHKIKLRLGPA 121 (242)
T ss_dssp CSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTT-CTTTEEEEESCH
T ss_pred cCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC-CCCcEEEEEcCH
Confidence 36899999999999999998775 7899999999999999999999996 888999999874
No 172
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=98.96 E-value=9.7e-09 Score=94.17 Aligned_cols=53 Identities=11% Similarity=0.046 Sum_probs=44.2
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
+.+|||||||+|.++..++... .+++|+|+|+.+++.|+++... +++++..|.
T Consensus 43 ~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~~~------~v~~~~~d~ 95 (250)
T 2p7i_A 43 PGNLLELGSFKGDFTSRLQEHF--NDITCVEASEEAISHAQGRLKD------GITYIHSRF 95 (250)
T ss_dssp SSCEEEESCTTSHHHHHHTTTC--SCEEEEESCHHHHHHHHHHSCS------CEEEEESCG
T ss_pred CCcEEEECCCCCHHHHHHHHhC--CcEEEEeCCHHHHHHHHHhhhC------CeEEEEccH
Confidence 3589999999999998888753 4899999999999999988642 588888764
No 173
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.96 E-value=1.4e-09 Score=106.79 Aligned_cols=56 Identities=18% Similarity=0.074 Sum_probs=48.7
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
..+|||||||+|.+...|+.. +.+|+|+|+|+++++.|+++++.. ++++++++|..
T Consensus 51 ~~~VLEIG~G~G~lT~~La~~--~~~V~aVEid~~li~~a~~~~~~~----~~v~vi~gD~l 106 (295)
T 3gru_A 51 DDVVLEIGLGKGILTEELAKN--AKKVYVIEIDKSLEPYANKLKELY----NNIEIIWGDAL 106 (295)
T ss_dssp TCEEEEECCTTSHHHHHHHHH--SSEEEEEESCGGGHHHHHHHHHHC----SSEEEEESCTT
T ss_pred cCEEEEECCCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHhccC----CCeEEEECchh
Confidence 468999999999999999875 579999999999999999998743 36999999854
No 174
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.96 E-value=4.6e-09 Score=103.03 Aligned_cols=61 Identities=15% Similarity=0.081 Sum_probs=51.4
Q ss_pred CCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHH--CCCC-CCcEEEEEccC
Q 015035 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKS--NPHI-SELIEIRKVDN 176 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~--n~~l-~~rI~~~~~d~ 176 (414)
.+.+|||||||+|.++..+++..+..+++++|+|+.+++.|++|+.. ++ + ..+++++.+|.
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~-~~~~rv~v~~~Da 158 (304)
T 2o07_A 95 NPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIG-YSSSKLTLHVGDG 158 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGG-GGCTTEEEEESCH
T ss_pred CCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcc-cCCCcEEEEECcH
Confidence 34699999999999999998766678999999999999999999865 32 4 46899988873
No 175
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.96 E-value=2.8e-10 Score=116.55 Aligned_cols=57 Identities=16% Similarity=-0.016 Sum_probs=50.5
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHC--CCCCCcEEEEEccC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSN--PHISELIEIRKVDN 176 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n--~~l~~rI~~~~~d~ 176 (414)
+.+|||+|||+|.+++.|+.. +.+|+|+|+|+.+++.|++|++.+ + + ++|+++++|.
T Consensus 94 g~~VLDLgcG~G~~al~LA~~--g~~V~~VD~s~~~l~~Ar~N~~~~~~g-l-~~i~~i~~Da 152 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSK--ASQGIYIERNDETAVAARHNIPLLLNE-G-KDVNILTGDF 152 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHHSCT-T-CEEEEEESCG
T ss_pred CCEEEEeCCCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHhHHHhccC-C-CcEEEEECcH
Confidence 468999999999999888764 579999999999999999999987 6 5 6899999874
No 176
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.96 E-value=3.3e-09 Score=99.59 Aligned_cols=60 Identities=15% Similarity=0.120 Sum_probs=54.8
Q ss_pred CCeEEEECCcccHHHHHHHHHhc-CCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLL-GWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~-~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
+.+|||||||+|..++.++...+ +.+++++|+++.+++.|++|++.++ +.++|+++.+|.
T Consensus 71 ~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g-~~~~i~~~~gda 131 (237)
T 3c3y_A 71 AKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAG-VEHKINFIESDA 131 (237)
T ss_dssp CCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTT-CGGGEEEEESCH
T ss_pred CCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC-CCCcEEEEEcCH
Confidence 46899999999999999998877 7899999999999999999999986 888999998874
No 177
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=98.96 E-value=2e-09 Score=110.42 Aligned_cols=62 Identities=16% Similarity=0.117 Sum_probs=51.0
Q ss_pred CCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHH-------HCCCC-CCcEEEEEccCC
Q 015035 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVK-------SNPHI-SELIEIRKVDNS 177 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~-------~n~~l-~~rI~~~~~d~~ 177 (414)
...+|||||||+|.+.+.+|...+..+++|+|+++.++++|++|++ .++ + .++|+++++|..
T Consensus 173 ~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~G-l~~~rVefi~GD~~ 242 (438)
T 3uwp_A 173 DDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYG-KKHAEYTLERGDFL 242 (438)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHT-BCCCEEEEEECCTT
T ss_pred CCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhC-CCCCCeEEEECccc
Confidence 3468999999999999998876655469999999999999998763 343 5 368999999864
No 178
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=98.95 E-value=1.8e-09 Score=102.42 Aligned_cols=60 Identities=12% Similarity=0.118 Sum_probs=54.7
Q ss_pred CCeEEEECCcccHHHHHHHHHhc-CCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLL-GWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~-~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
+.+|||||||+|..++.++..++ +.+++++|+++.+++.|++|++.++ +.++|+++.+|.
T Consensus 80 ~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g-~~~~i~~~~gda 140 (247)
T 1sui_A 80 AKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAG-VDHKIDFREGPA 140 (247)
T ss_dssp CCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTT-CGGGEEEEESCH
T ss_pred cCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC-CCCCeEEEECCH
Confidence 46899999999999999998877 7899999999999999999999986 888999998874
No 179
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=98.95 E-value=2e-09 Score=98.11 Aligned_cols=60 Identities=17% Similarity=0.138 Sum_probs=54.1
Q ss_pred CCeEEEECCcccHHHHHHHHHhc-CCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLL-GWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~-~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
..+|||||||+|..+..++...+ +.+++++|+|+.+++.|++|++.++ +.++|+++.+|.
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~-~~~~v~~~~~d~ 117 (210)
T 3c3p_A 57 PQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNG-LIDRVELQVGDP 117 (210)
T ss_dssp CSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHS-GGGGEEEEESCH
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCC-CCceEEEEEecH
Confidence 35899999999999999998777 7899999999999999999999885 778899998873
No 180
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.95 E-value=6.9e-09 Score=93.37 Aligned_cols=54 Identities=17% Similarity=0.179 Sum_probs=47.2
Q ss_pred eEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 118 KGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 118 ~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
+|||||||+|.++..++.. +.+++|+|+|+.+++.|++++..++ + ++.++..|.
T Consensus 32 ~vLdiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~-~--~~~~~~~d~ 85 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASL--GYEVTAVDQSSVGLAKAKQLAQEKG-V--KITTVQSNL 85 (202)
T ss_dssp EEEECCCSCTHHHHHHHTT--TCEEEEECSSHHHHHHHHHHHHHHT-C--CEEEECCBT
T ss_pred CEEEECCCCCHhHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcC-C--ceEEEEcCh
Confidence 9999999999999888864 6799999999999999999998874 4 688887764
No 181
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.95 E-value=3.7e-10 Score=123.52 Aligned_cols=48 Identities=13% Similarity=0.061 Sum_probs=41.3
Q ss_pred CCeEEEECCcccHHHHHHHHHhc---CCeeEEecCcHHHHHHH--HHHHHHCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLL---GWSFVGSDMTDVALEWA--EKNVKSNP 163 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~---~~~vvgvDis~~Al~~A--~~N~~~n~ 163 (414)
..+|||.|||||++.+.++...+ ..+++|+||++.+++.| +.|+..|.
T Consensus 322 g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~ 374 (878)
T 3s1s_A 322 DEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQ 374 (878)
T ss_dssp TCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTT
T ss_pred CCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhh
Confidence 46999999999999999887664 35899999999999999 88887653
No 182
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.95 E-value=3.9e-09 Score=111.52 Aligned_cols=60 Identities=15% Similarity=0.025 Sum_probs=47.7
Q ss_pred CCeEEEECCcccHHHHHHHHHhc------------------CCeeEEecCcHHHHHHHHHHHHHCCCCCC----cEEEEE
Q 015035 116 KVKGFDIGTGANCIYPLLGASLL------------------GWSFVGSDMTDVALEWAEKNVKSNPHISE----LIEIRK 173 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~------------------~~~vvgvDis~~Al~~A~~N~~~n~~l~~----rI~~~~ 173 (414)
..+|+|.|||||.+.+.++.... ..+++|+|+++.++++|+.|+..++ +.. ++.+++
T Consensus 170 ~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~g-i~~~~~~~~~I~~ 248 (541)
T 2ar0_A 170 REVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHD-IEGNLDHGGAIRL 248 (541)
T ss_dssp TCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTT-CCCBGGGTBSEEE
T ss_pred CCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhC-CCccccccCCeEe
Confidence 46899999999999887776532 2479999999999999999998885 543 266677
Q ss_pred ccC
Q 015035 174 VDN 176 (414)
Q Consensus 174 ~d~ 176 (414)
+|.
T Consensus 249 gDt 251 (541)
T 2ar0_A 249 GNT 251 (541)
T ss_dssp SCT
T ss_pred CCC
Confidence 663
No 183
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.94 E-value=1.9e-08 Score=99.29 Aligned_cols=60 Identities=15% Similarity=0.148 Sum_probs=54.6
Q ss_pred CCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
...+|||||||+|.++..++...++++++++|+ +.+++.|++|++.++ +.++|+++..|.
T Consensus 183 ~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~-~~~~v~~~~~d~ 242 (360)
T 1tw3_A 183 NVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEG-LSDRVDVVEGDF 242 (360)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTT-CTTTEEEEECCT
T ss_pred cCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcC-CCCceEEEeCCC
Confidence 346999999999999999999889999999999 999999999999985 878999998875
No 184
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.94 E-value=1.7e-08 Score=99.94 Aligned_cols=61 Identities=15% Similarity=0.106 Sum_probs=55.4
Q ss_pred CCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
...+|||||||+|.++..++.++|+.+++++|+ +.+++.|+++++.++ +.++|+++..|..
T Consensus 190 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~-~~~~v~~~~~d~~ 250 (359)
T 1x19_A 190 GVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKG-VADRMRGIAVDIY 250 (359)
T ss_dssp TCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTT-CTTTEEEEECCTT
T ss_pred CCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcC-CCCCEEEEeCccc
Confidence 346999999999999999999999999999999 999999999999885 7788999988753
No 185
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=98.94 E-value=1.2e-08 Score=97.03 Aligned_cols=52 Identities=19% Similarity=0.251 Sum_probs=43.9
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
..+|||||||+|.++..++. ++.+++|+|+|+.+++.|+++. .++.++..|.
T Consensus 58 ~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~-------~~~~~~~~d~ 109 (279)
T 3ccf_A 58 GEFILDLGCGTGQLTEKIAQ--SGAEVLGTDNAATMIEKARQNY-------PHLHFDVADA 109 (279)
T ss_dssp TCEEEEETCTTSHHHHHHHH--TTCEEEEEESCHHHHHHHHHHC-------TTSCEEECCT
T ss_pred CCEEEEecCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHHhhC-------CCCEEEECCh
Confidence 46899999999999988887 7789999999999999998875 1356777664
No 186
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=98.94 E-value=1.2e-08 Score=91.76 Aligned_cols=133 Identities=11% Similarity=0.090 Sum_probs=88.3
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccc
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~~~p~~~~~~~~~~~~~~ 195 (414)
..+|||||||+|.++..++...+. +++|+|+|+.+++.|++++... .++.++..|..+
T Consensus 43 ~~~vLdiGcG~G~~~~~l~~~~~~-~v~~~D~s~~~~~~a~~~~~~~----~~i~~~~~d~~~----------------- 100 (215)
T 2pxx_A 43 EDRILVLGCGNSALSYELFLGGFP-NVTSVDYSSVVVAAMQACYAHV----PQLRWETMDVRK----------------- 100 (215)
T ss_dssp TCCEEEETCTTCSHHHHHHHTTCC-CEEEEESCHHHHHHHHHHTTTC----TTCEEEECCTTS-----------------
T ss_pred CCeEEEECCCCcHHHHHHHHcCCC-cEEEEeCCHHHHHHHHHhcccC----CCcEEEEcchhc-----------------
Confidence 468999999999999988876443 8999999999999999998642 368888877431
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccccccccCCCccccCCCCCcccc
Q 015035 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (414)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em~~ 275 (414)
+ . ..+++||+|+||+|+..-..... .|.. ....
T Consensus 101 ------------------------------------~-~--~~~~~fD~v~~~~~~~~~~~~~~-~~~~---~~~~---- 133 (215)
T 2pxx_A 101 ------------------------------------L-D--FPSASFDVVLEKGTLDALLAGER-DPWT---VSSE---- 133 (215)
T ss_dssp ------------------------------------C-C--SCSSCEEEEEEESHHHHHTTTCS-CTTS---CCHH----
T ss_pred ------------------------------------C-C--CCCCcccEEEECcchhhhccccc-cccc---cccc----
Confidence 0 0 02468999999999853211000 0110 0011
Q ss_pred cCChHHHHHHHHHHHHHhhccCcEEEEEeCCcCCHHHHHHHHHHcCC
Q 015035 276 SGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGV 322 (414)
Q Consensus 276 ~GGe~~Fv~rii~eS~~l~~~~~w~t~mvgk~~~l~~l~~~l~~~g~ 322 (414)
...-..+++++...+++++|++.+... ..-......+...++
T Consensus 134 ---~~~~~~~~l~~~~~~LkpgG~li~~~~--~~~~~~~~~~~~~~~ 175 (215)
T 2pxx_A 134 ---GVHTVDQVLSEVSRVLVPGGRFISMTS--AAPHFRTRHYAQAYY 175 (215)
T ss_dssp ---HHHHHHHHHHHHHHHEEEEEEEEEEES--CCHHHHHHHHCCGGG
T ss_pred ---hhHHHHHHHHHHHHhCcCCCEEEEEeC--CCcHHHHHHHhcccc
Confidence 244567788888888999998755443 333334455555554
No 187
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.94 E-value=4.2e-09 Score=106.19 Aligned_cols=176 Identities=14% Similarity=0.092 Sum_probs=113.7
Q ss_pred cCCcEEEecCCCeeCCCCCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHH
Q 015035 72 DHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVA 151 (414)
Q Consensus 72 ~fgl~~~vp~gvLiPriP~R~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~A 151 (414)
+||.-+.++-...+.. .. ..|-+.+ ..... . ...+.+|||||||+|.++..+++..+ .+|+++|||+.+
T Consensus 155 ~~G~~L~LDG~~q~te-~D-~~YhE~l----~~~~~---~-~p~pkrVL~IGgG~G~~arellk~~~-~~Vt~VEID~~v 223 (364)
T 2qfm_A 155 QFGNILILSGDVNLAE-SD-LAYTRAI----MGSGK---E-DYTGKDVLILGGGDGGILCEIVKLKP-KMVTMVEIDQMV 223 (364)
T ss_dssp TTEEEEEETTEEEEET-TC-HHHHHHH----TTTTC---C-CCTTCEEEEEECTTCHHHHHHHTTCC-SEEEEEESCHHH
T ss_pred CcceEEEECCEEeeec-Cc-hHHHHHH----hhhhh---h-CCCCCEEEEEECChhHHHHHHHHCCC-CEEEEEECCHHH
Confidence 5777777777677765 33 4444332 22111 0 12457999999999999988877544 799999999999
Q ss_pred HHHHHHHHHHCC--CCC----CcEEEEEccCCCCCCcccccccCCccccccccccCCCCCCCCCCCCCCCCCCCCCCCCC
Q 015035 152 LEWAEKNVKSNP--HIS----ELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSS 225 (414)
Q Consensus 152 l~~A~~N~~~n~--~l~----~rI~~~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (414)
++.|++|+...+ .+. ++++++.+|...
T Consensus 224 ie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~----------------------------------------------- 256 (364)
T 2qfm_A 224 IDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIP----------------------------------------------- 256 (364)
T ss_dssp HHHHHHHCCC----CCSSSEETTEEEEESCHHH-----------------------------------------------
T ss_pred HHHHHHHHHHhccccccccCCCcEEEEECcHHH-----------------------------------------------
Confidence 999999975321 123 279999887431
Q ss_pred CCCCCccccccCCCCcEEEEEECCCcccccccccCCCccccCCCCCcccccCChHHHHHHHHHHHHHhhccCcEEEEEeC
Q 015035 226 YHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVG 305 (414)
Q Consensus 226 ~~~~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em~~~GGe~~Fv~rii~eS~~l~~~~~w~t~mvg 305 (414)
++.......++||+||++||..+.. ..|. ++. ...|++.+++.+..+++++|++.+..+
T Consensus 257 -----~L~~~~~~~~~fDvII~D~~d~P~~----~~p~--------~L~----t~eFy~~~~~~~~~~L~pgGilv~qs~ 315 (364)
T 2qfm_A 257 -----VLKRYAKEGREFDYVINDLTAVPIS----TSPE--------EDS----TWEFLRLILDLSMKVLKQDGKYFTQGN 315 (364)
T ss_dssp -----HHHHHHHHTCCEEEEEEECCSSCCC----CC------------C----HHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred -----HHHhhhccCCCceEEEECCCCcccC----cCch--------hhh----HHHHHHHHHHHHHhhCCCCcEEEEEcC
Confidence 1221111246899999999773311 1121 111 478999999988999999999988877
Q ss_pred CcCCHHHHHHHHHH-c--CCceEEE
Q 015035 306 RKSNLKFLISKLRK-V--GVTIVKT 327 (414)
Q Consensus 306 k~~~l~~l~~~l~~-~--g~~~v~~ 327 (414)
...+.++...+++ . -+..+..
T Consensus 316 -s~~~~e~~~~~~~~l~~~F~~v~~ 339 (364)
T 2qfm_A 316 -CVNLTEALSLYEEQLGRLYCPVEF 339 (364)
T ss_dssp -ETTCHHHHHHHHHHHTTSSSCEEE
T ss_pred -CcchHHHHHHHHHHHHHhCCceEE
Confidence 4444555555554 2 3445555
No 188
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.94 E-value=4.3e-09 Score=104.40 Aligned_cols=136 Identities=14% Similarity=0.043 Sum_probs=93.8
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccc
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~~~p~~~~~~~~~~~~~~ 195 (414)
+.+|||||||+|.++..|++.+|+.+++++|||+.+++.|+++...+ ...+++++.+|..+
T Consensus 90 ~~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~--~~~rv~v~~~Da~~----------------- 150 (317)
T 3gjy_A 90 KLRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIP--RAPRVKIRVDDARM----------------- 150 (317)
T ss_dssp GCEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCC--CTTTEEEEESCHHH-----------------
T ss_pred CCEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhcccc--CCCceEEEECcHHH-----------------
Confidence 35999999999999999998889999999999999999999998654 24689999887421
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccccccccCCCccccCCCCCcccc
Q 015035 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (414)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em~~ 275 (414)
++... .+++||+|+++.+.... ....+
T Consensus 151 -----------------------------------~l~~~--~~~~fDvIi~D~~~~~~--------------~~~~L-- 177 (317)
T 3gjy_A 151 -----------------------------------VAESF--TPASRDVIIRDVFAGAI--------------TPQNF-- 177 (317)
T ss_dssp -----------------------------------HHHTC--CTTCEEEEEECCSTTSC--------------CCGGG--
T ss_pred -----------------------------------HHhhc--cCCCCCEEEECCCCccc--------------cchhh--
Confidence 11111 24689999999633210 01111
Q ss_pred cCChHHHHHHHHHHHHHhhccCcEEEEEeCCcCC---HHHHHHHHHHcCCceEEEEEe
Q 015035 276 SGGERAFITRIIEDSVALKQTFRWYTSMVGRKSN---LKFLISKLRKVGVTIVKTTEF 330 (414)
Q Consensus 276 ~GGe~~Fv~rii~eS~~l~~~~~w~t~mvgk~~~---l~~l~~~l~~~g~~~v~~~e~ 330 (414)
+...++++....++++|++.+-++.... +..+.+.|++. |..+.+..+
T Consensus 178 ------~t~efl~~~~r~LkpgGvlv~~~~~~~~~~~~~~~~~tL~~v-F~~v~~~~~ 228 (317)
T 3gjy_A 178 ------TTVEFFEHCHRGLAPGGLYVANCGDHSDLRGAKSELAGMMEV-FEHVAVIAD 228 (317)
T ss_dssp ------SBHHHHHHHHHHEEEEEEEEEEEEECTTCHHHHHHHHHHHHH-CSEEEEEEC
T ss_pred ------hHHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHH-CCceEEEEe
Confidence 1123445556788899998877764443 34566666665 556666654
No 189
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.93 E-value=5.9e-09 Score=96.88 Aligned_cols=57 Identities=7% Similarity=-0.092 Sum_probs=47.8
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
..+|||||||+|.++..++...+ .+++|+|+|+.+++.|+++++.++ .++.++++|.
T Consensus 61 ~~~vLDiGcGtG~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~---~~v~~~~~d~ 117 (236)
T 1zx0_A 61 GGRVLEVGFGMAIAASKVQEAPI-DEHWIIECNDGVFQRLRDWAPRQT---HKVIPLKGLW 117 (236)
T ss_dssp CEEEEEECCTTSHHHHHHHTSCE-EEEEEEECCHHHHHHHHHHGGGCS---SEEEEEESCH
T ss_pred CCeEEEEeccCCHHHHHHHhcCC-CeEEEEcCCHHHHHHHHHHHHhcC---CCeEEEecCH
Confidence 46899999999999988865333 489999999999999999998764 4688888764
No 190
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.93 E-value=4.7e-09 Score=97.89 Aligned_cols=60 Identities=17% Similarity=0.091 Sum_probs=54.1
Q ss_pred CCeEEEECCcccHHHHHHHHHhc-CCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLL-GWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~-~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
..+|||||||+|..+..++...+ +.+++++|+++.+++.|++|++.++ +.++|+++.+|.
T Consensus 61 ~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g-~~~~v~~~~~d~ 121 (239)
T 2hnk_A 61 AKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENG-LENKIFLKLGSA 121 (239)
T ss_dssp CSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTT-CGGGEEEEESCH
T ss_pred cCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC-CCCCEEEEECCH
Confidence 36899999999999999998876 6899999999999999999999986 777899998874
No 191
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=98.92 E-value=1.3e-08 Score=94.76 Aligned_cols=55 Identities=25% Similarity=0.230 Sum_probs=47.4
Q ss_pred CCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
...+|||||||+|.++..++...++.+++|+|+|+.+++.|+++ . .++.++..|.
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~---~----~~~~~~~~d~ 87 (259)
T 2p35_A 33 RVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADR---L----PNTNFGKADL 87 (259)
T ss_dssp CCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHH---S----TTSEEEECCT
T ss_pred CCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHh---C----CCcEEEECCh
Confidence 34689999999999999999988889999999999999999988 2 2477877764
No 192
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=98.91 E-value=3e-08 Score=94.24 Aligned_cols=131 Identities=11% Similarity=0.005 Sum_probs=93.4
Q ss_pred CCCeEEEECCcccHHHHHHHHHh-cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccc
Q 015035 115 DKVKGFDIGTGANCIYPLLGASL-LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQ 193 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~-~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~~~p~~~~~~~~~~~~ 193 (414)
.+.+|||+|||+|.....||... +.-+|+|+|+++++++.|+++++..+ ++..+..|... |.
T Consensus 77 pG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~----ni~~V~~d~~~--p~----------- 139 (233)
T 4df3_A 77 EGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRR----NIFPILGDARF--PE----------- 139 (233)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCT----TEEEEESCTTC--GG-----------
T ss_pred CCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhc----CeeEEEEeccC--cc-----------
Confidence 34699999999999999999864 66799999999999999999987653 57777776431 10
Q ss_pred cccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccccccccCCCccccCCCCCcc
Q 015035 194 DESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEM 273 (414)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em 273 (414)
.. . ...+.+|+|+|..|+...
T Consensus 140 -------------------------------------~~-~--~~~~~vDvVf~d~~~~~~------------------- 160 (233)
T 4df3_A 140 -------------------------------------KY-R--HLVEGVDGLYADVAQPEQ------------------- 160 (233)
T ss_dssp -------------------------------------GG-T--TTCCCEEEEEECCCCTTH-------------------
T ss_pred -------------------------------------cc-c--cccceEEEEEEeccCChh-------------------
Confidence 00 0 124689999998766421
Q ss_pred cccCChHHHHHHHHHHHHHhhccCcEEEEEe---------CCcCCHHHHHHHHHHcCCceEEEEEe
Q 015035 274 VCSGGERAFITRIIEDSVALKQTFRWYTSMV---------GRKSNLKFLISKLRKVGVTIVKTTEF 330 (414)
Q Consensus 274 ~~~GGe~~Fv~rii~eS~~l~~~~~w~t~mv---------gk~~~l~~l~~~l~~~g~~~v~~~e~ 330 (414)
...++.++..+++++|.+...+ .-+..++..++.|++.||+.+++.++
T Consensus 161 ---------~~~~l~~~~r~LKpGG~lvI~ik~r~~d~~~p~~~~~~~ev~~L~~~GF~l~e~i~L 217 (233)
T 4df3_A 161 ---------AAIVVRNARFFLRDGGYMLMAIKARSIDVTTEPSEVYKREIKTLMDGGLEIKDVVHL 217 (233)
T ss_dssp ---------HHHHHHHHHHHEEEEEEEEEEEECCHHHHHTCCCHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred ---------HHHHHHHHHHhccCCCEEEEEEecccCCCCCChHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 2234566777788888775543 11223456778899999988777665
No 193
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.91 E-value=7.6e-09 Score=109.41 Aligned_cols=62 Identities=11% Similarity=0.116 Sum_probs=52.2
Q ss_pred CCCeEEEECCcccHHHHHHHHHh---cCCeeEEecCcHHHHHHHHHHHHHCCCCC-CcEEEEEccCC
Q 015035 115 DKVKGFDIGTGANCIYPLLGASL---LGWSFVGSDMTDVALEWAEKNVKSNPHIS-ELIEIRKVDNS 177 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~---~~~~vvgvDis~~Al~~A~~N~~~n~~l~-~rI~~~~~d~~ 177 (414)
...+|+|.|||||.+.+.++... ...+++|+|+++.++++|+.|+..++ +. +++.++++|..
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~g-i~~~~~~I~~gDtL 286 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHG-VPIENQFLHNADTL 286 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTT-CCGGGEEEEESCTT
T ss_pred CCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcC-CCcCccceEeccee
Confidence 45699999999999988877764 35789999999999999999999886 64 46888888754
No 194
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=98.91 E-value=1.9e-08 Score=91.51 Aligned_cols=59 Identities=17% Similarity=0.105 Sum_probs=50.7
Q ss_pred CCeEEEECCcccHHHHHHHHHh-cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL-LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~-~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
..+|||||||+|.++..++... +..+++|+|+++.+++.|++++..++ +. +++++..|.
T Consensus 78 ~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~-~~-~v~~~~~d~ 137 (215)
T 2yxe_A 78 GMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLG-YD-NVIVIVGDG 137 (215)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHT-CT-TEEEEESCG
T ss_pred CCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC-CC-CeEEEECCc
Confidence 4699999999999999998876 55799999999999999999998875 54 488887763
No 195
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=98.91 E-value=5.6e-09 Score=95.53 Aligned_cols=60 Identities=22% Similarity=0.211 Sum_probs=47.5
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCC----------CCCcEEEEEccCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPH----------ISELIEIRKVDNS 177 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~----------l~~rI~~~~~d~~ 177 (414)
+.+|||+|||+|..+..|+.+ +++|+|+|+|+.|++.|+++....+. ...+|+++++|..
T Consensus 23 ~~~vLD~GCG~G~~~~~la~~--g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~ 92 (203)
T 1pjz_A 23 GARVLVPLCGKSQDMSWLSGQ--GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFF 92 (203)
T ss_dssp TCEEEETTTCCSHHHHHHHHH--CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCS
T ss_pred CCEEEEeCCCCcHhHHHHHHC--CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccc
Confidence 469999999999999988875 77999999999999999988653100 0246888888753
No 196
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=98.91 E-value=9.4e-08 Score=88.34 Aligned_cols=57 Identities=11% Similarity=-0.005 Sum_probs=45.8
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
+.+|||||||+|.++..++...++.+|+|+|+|+.+++.+.++++..+ ++.++.+|.
T Consensus 58 g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~~----~v~~~~~d~ 114 (210)
T 1nt2_A 58 DERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERN----NIIPLLFDA 114 (210)
T ss_dssp SCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCS----SEEEECSCT
T ss_pred CCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcCC----CeEEEEcCC
Confidence 458999999999999989887666699999999999887777766542 477776653
No 197
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.90 E-value=3.3e-09 Score=100.50 Aligned_cols=55 Identities=13% Similarity=0.106 Sum_probs=47.3
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
..+|||||||+|.++..|+.+. .+++|+|+|+.+++.|++|++.. ++++++++|.
T Consensus 31 ~~~VLDiG~G~G~lt~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~----~~v~~~~~D~ 85 (244)
T 1qam_A 31 HDNIFEIGSGKGHFTLELVQRC--NFVTAIEIDHKLCKTTENKLVDH----DNFQVLNKDI 85 (244)
T ss_dssp TCEEEEECCTTSHHHHHHHHHS--SEEEEECSCHHHHHHHHHHTTTC----CSEEEECCCG
T ss_pred CCEEEEEeCCchHHHHHHHHcC--CeEEEEECCHHHHHHHHHhhccC----CCeEEEEChH
Confidence 4689999999999999988764 79999999999999999998643 3688988874
No 198
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=98.90 E-value=7.8e-09 Score=102.73 Aligned_cols=58 Identities=17% Similarity=0.158 Sum_probs=50.5
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
..+|||||||+|.++..+++. +..+|+|+|+++ +++.|+++++.++ +.++|+++++|.
T Consensus 51 ~~~VLDiGcGtG~ls~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~~~-l~~~v~~~~~d~ 108 (348)
T 2y1w_A 51 DKIVLDVGCGSGILSFFAAQA-GARKIYAVEAST-MAQHAEVLVKSNN-LTDRIVVIPGKV 108 (348)
T ss_dssp TCEEEEETCTTSHHHHHHHHT-TCSEEEEEECST-HHHHHHHHHHHTT-CTTTEEEEESCT
T ss_pred cCEEEEcCCCccHHHHHHHhC-CCCEEEEECCHH-HHHHHHHHHHHcC-CCCcEEEEEcch
Confidence 468999999999999888764 456999999997 7899999999996 888999998875
No 199
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.90 E-value=2.7e-09 Score=103.54 Aligned_cols=53 Identities=13% Similarity=0.098 Sum_probs=46.4
Q ss_pred eEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 118 KGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 118 ~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
+|||||||+|.++..|+.+ +.+|+|+|+|+++++.+++++.. ++++++++|..
T Consensus 49 ~VLEIG~G~G~lt~~L~~~--~~~V~avEid~~~~~~l~~~~~~-----~~v~vi~~D~l 101 (271)
T 3fut_A 49 PVFEVGPGLGALTRALLEA--GAEVTAIEKDLRLRPVLEETLSG-----LPVRLVFQDAL 101 (271)
T ss_dssp CEEEECCTTSHHHHHHHHT--TCCEEEEESCGGGHHHHHHHTTT-----SSEEEEESCGG
T ss_pred eEEEEeCchHHHHHHHHHc--CCEEEEEECCHHHHHHHHHhcCC-----CCEEEEECChh
Confidence 8999999999999999875 46999999999999999998752 36999998853
No 200
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.90 E-value=1.9e-08 Score=99.09 Aligned_cols=145 Identities=11% Similarity=0.074 Sum_probs=91.8
Q ss_pred CCeEEEECCcccHHHHHHHHHhc-CCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCcccc
Q 015035 116 KVKGFDIGTGANCIYPLLGASLL-GWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~-~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~~~p~~~~~~~~~~~~~ 194 (414)
..+|||+|||+|..++.|+.... ..+|+|+|+++.+++.+++|+++++ + .+|++++.|..+.
T Consensus 103 g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g-~-~~v~~~~~D~~~~--------------- 165 (309)
T 2b9e_A 103 GSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAG-V-SCCELAEEDFLAV--------------- 165 (309)
T ss_dssp TCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTT-C-CSEEEEECCGGGS---------------
T ss_pred CCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC-C-CeEEEEeCChHhc---------------
Confidence 46899999999999999998764 4799999999999999999999996 6 4689988874310
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccccccccCCCccccCC--CCCc
Q 015035 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGG--TPEE 272 (414)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g--~~~E 272 (414)
... ....++||.|++|||+-....- ..+|...... +...
T Consensus 166 -------------------------------------~~~-~~~~~~fD~Vl~D~PcSg~G~~-~r~pd~~~~~~~~~~~ 206 (309)
T 2b9e_A 166 -------------------------------------SPS-DPRYHEVHYILLDPSCSGSGMP-SRQLEEPGAGTPSPVR 206 (309)
T ss_dssp -------------------------------------CTT-CGGGTTEEEEEECCCCCC-------------------CC
T ss_pred -------------------------------------Ccc-ccccCCCCEEEEcCCcCCCCCC-ccCCChhhhccCCHHH
Confidence 000 0001479999999999644221 1122211000 0110
Q ss_pred ccccCCh-HHHHHHHHHHHHHhhccCcEEE---EEeCCcCCHHHHHHHHHHcC
Q 015035 273 MVCSGGE-RAFITRIIEDSVALKQTFRWYT---SMVGRKSNLKFLISKLRKVG 321 (414)
Q Consensus 273 m~~~GGe-~~Fv~rii~eS~~l~~~~~w~t---~mvgk~~~l~~l~~~l~~~g 321 (414)
+ -+ ..+..+|++.+..+++ +|.+. +-+...++...+...|+++.
T Consensus 207 ~----~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~~~~Ene~~v~~~l~~~~ 254 (309)
T 2b9e_A 207 L----HALAGFQQRALCHALTFPS-LQRLVYSTCSLCQEENEDVVRDALQQNP 254 (309)
T ss_dssp H----HHHHHHHHHHHHHHTTCTT-CCEEEEEESCCCGGGTHHHHHHHHTTST
T ss_pred H----HHHHHHHHHHHHHHHhccC-CCEEEEECCCCChHHhHHHHHHHHHhCC
Confidence 0 01 2345678888877765 55432 22555677777788887764
No 201
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.89 E-value=5.1e-09 Score=97.73 Aligned_cols=60 Identities=17% Similarity=0.094 Sum_probs=53.8
Q ss_pred CCeEEEECCcccHHHHHHHHHhc-CCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLL-GWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~-~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
+.+|||||||+|..++.++...+ +.+++++|+++.+++.|++|++.++ +.++|+++.+|.
T Consensus 73 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g-~~~~i~~~~~d~ 133 (232)
T 3cbg_A 73 AKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAG-VAEKISLRLGPA 133 (232)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHT-CGGGEEEEESCH
T ss_pred CCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC-CCCcEEEEEcCH
Confidence 35899999999999999998776 6899999999999999999999886 778899998763
No 202
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.89 E-value=1.7e-08 Score=96.50 Aligned_cols=46 Identities=20% Similarity=0.143 Sum_probs=36.9
Q ss_pred CCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHH
Q 015035 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKS 161 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~ 161 (414)
...+|||||||+|... .++...++.+|+|+|+|+.+++.|+++++.
T Consensus 71 ~~~~vLDiGcG~G~~~-~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~ 116 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQ-LLSACSHFEDITMTDFLEVNRQELGRWLQE 116 (289)
T ss_dssp CCSEEEEETCTTCCGG-GTTGGGGCSEEEEECSCHHHHHHHHHHHTT
T ss_pred CCCeEEEECCCcChHH-HHhhccCCCeEEEeCCCHHHHHHHHHHHhh
Confidence 3468999999999944 344444567999999999999999997754
No 203
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.88 E-value=2.4e-09 Score=105.33 Aligned_cols=58 Identities=19% Similarity=0.186 Sum_probs=52.6
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
..++||+|||+|.++..++.+.++.+|+|+|+|+.|++.|++|++.++ ++++++++|.
T Consensus 27 g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g---~~v~~v~~d~ 84 (301)
T 1m6y_A 27 EKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFS---DRVSLFKVSY 84 (301)
T ss_dssp TCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGT---TTEEEEECCG
T ss_pred CCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEECCH
Confidence 468999999999999999998878899999999999999999998874 5899999874
No 204
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.88 E-value=1.1e-08 Score=100.40 Aligned_cols=137 Identities=12% Similarity=0.018 Sum_probs=93.1
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHH-CCC-C-CCcEEEEEccCCCCCCcccccccCCcc
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKS-NPH-I-SELIEIRKVDNSESTPSIQESLTGKSV 192 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~-n~~-l-~~rI~~~~~d~~~~~p~~~~~~~~~~~ 192 (414)
+.+|||||||+|.++..+++..+..+++++|+|+.+++.|++++.. +.+ + ..+++++.+|..+
T Consensus 78 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~-------------- 143 (314)
T 1uir_A 78 PKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARA-------------- 143 (314)
T ss_dssp CCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHH--------------
T ss_pred CCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHH--------------
Confidence 4699999999999999988866678999999999999999999864 211 2 3579998887421
Q ss_pred ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccccccccCCCccccCCCCCc
Q 015035 193 QDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEE 272 (414)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~E 272 (414)
.+. ...++||+|++|+|.... ..+..
T Consensus 144 --------------------------------------~l~---~~~~~fD~Ii~d~~~~~~-----------~~~~~-- 169 (314)
T 1uir_A 144 --------------------------------------YLE---RTEERYDVVIIDLTDPVG-----------EDNPA-- 169 (314)
T ss_dssp --------------------------------------HHH---HCCCCEEEEEEECCCCBS-----------TTCGG--
T ss_pred --------------------------------------HHH---hcCCCccEEEECCCCccc-----------ccCcc--
Confidence 111 124689999999865210 00101
Q ss_pred ccccCChHHHHHHHHHHHHHhhccCcEEEEEeCCc-----CCHHHHHHHHHHcCCceEEE
Q 015035 273 MVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRK-----SNLKFLISKLRKVGVTIVKT 327 (414)
Q Consensus 273 m~~~GGe~~Fv~rii~eS~~l~~~~~w~t~mvgk~-----~~l~~l~~~l~~~g~~~v~~ 327 (414)
+..+...++++..++++++|++.+..+.. .....+.+.+++. +..+..
T Consensus 170 ------~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~l~~~-F~~v~~ 222 (314)
T 1uir_A 170 ------RLLYTVEFYRLVKAHLNPGGVMGMQTGMILLTHHRVHPVVHRTVREA-FRYVRS 222 (314)
T ss_dssp ------GGGSSHHHHHHHHHTEEEEEEEEEEEEEECC---CHHHHHHHHHHTT-CSEEEE
T ss_pred ------hhccHHHHHHHHHHhcCCCcEEEEEccCccccCHHHHHHHHHHHHHH-CCceEE
Confidence 11223556666778889999887765432 3356677777776 444444
No 205
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=98.88 E-value=6.5e-09 Score=95.48 Aligned_cols=60 Identities=17% Similarity=0.248 Sum_probs=50.9
Q ss_pred CCeEEEECCcccHHHHHHHHHh-cCCeeEEecCcHHHHHHHHHHHHHCCCC----CCcEEEEEccC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL-LGWSFVGSDMTDVALEWAEKNVKSNPHI----SELIEIRKVDN 176 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~-~~~~vvgvDis~~Al~~A~~N~~~n~~l----~~rI~~~~~d~ 176 (414)
..+|||||||+|.++..++... +..+|+|+|+++.+++.|++|+..++ + .+++.++..|.
T Consensus 78 ~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~v~~~~~d~ 142 (226)
T 1i1n_A 78 GAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDD-PTLLSSGRVQLVVGDG 142 (226)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHC-THHHHTSSEEEEESCG
T ss_pred CCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhc-ccccCCCcEEEEECCc
Confidence 4699999999999999998875 45799999999999999999998864 3 35688888764
No 206
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=98.88 E-value=1.8e-08 Score=90.82 Aligned_cols=57 Identities=23% Similarity=0.211 Sum_probs=45.8
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
..+|||+|||+|.+...++. .++.+++|+|+|+.+++.|+++++.++ .++.+++.|.
T Consensus 24 ~~~vLDiGcG~G~~~~~~~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~~d~ 80 (209)
T 2p8j_A 24 DKTVLDCGAGGDLPPLSIFV-EDGYKTYGIEISDLQLKKAENFSRENN---FKLNISKGDI 80 (209)
T ss_dssp CSEEEEESCCSSSCTHHHHH-HTTCEEEEEECCHHHHHHHHHHHHHHT---CCCCEEECCT
T ss_pred CCEEEEECCCCCHHHHHHHH-hCCCEEEEEECCHHHHHHHHHHHHhcC---CceEEEECch
Confidence 46899999999987544443 367899999999999999999998764 3577877764
No 207
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.88 E-value=2.2e-09 Score=99.69 Aligned_cols=55 Identities=9% Similarity=0.006 Sum_probs=50.4
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEE
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEI 171 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~ 171 (414)
+.+|||||||+|.+++.++...|+++++|+|||+.+++.|++|++.++ +..++++
T Consensus 50 ~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g-~~~~v~~ 104 (200)
T 3fzg_A 50 VSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLK-TTIKYRF 104 (200)
T ss_dssp CSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSC-CSSEEEE
T ss_pred CCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcC-CCccEEE
Confidence 469999999999999999988899999999999999999999999996 7666766
No 208
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=98.88 E-value=2.3e-08 Score=93.13 Aligned_cols=57 Identities=18% Similarity=0.338 Sum_probs=48.0
Q ss_pred CCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
...+|||||||+|.++..++.. +.+++|+|+|+.+++.|++++ .. ...++.++..|.
T Consensus 39 ~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~-~~--~~~~~~~~~~d~ 95 (263)
T 2yqz_A 39 EEPVFLELGVGTGRIALPLIAR--GYRYIALDADAAMLEVFRQKI-AG--VDRKVQVVQADA 95 (263)
T ss_dssp SCCEEEEETCTTSTTHHHHHTT--TCEEEEEESCHHHHHHHHHHT-TT--SCTTEEEEESCT
T ss_pred CCCEEEEeCCcCCHHHHHHHHC--CCEEEEEECCHHHHHHHHHHh-hc--cCCceEEEEccc
Confidence 3468999999999999888875 679999999999999999998 32 345799988874
No 209
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.87 E-value=7.7e-09 Score=97.01 Aligned_cols=57 Identities=7% Similarity=-0.068 Sum_probs=47.8
Q ss_pred CCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEcc
Q 015035 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVD 175 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d 175 (414)
.+.+|||||||+|.++..+++..+ .+++|+|+|+.+++.|+++++..+ .++.++.++
T Consensus 60 ~G~rVLdiG~G~G~~~~~~~~~~~-~~v~~id~~~~~~~~a~~~~~~~~---~~~~~~~~~ 116 (236)
T 3orh_A 60 KGGRVLEVGFGMAIAASKVQEAPI-DEHWIIECNDGVFQRLRDWAPRQT---HKVIPLKGL 116 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHTTSCE-EEEEEEECCHHHHHHHHHHGGGCS---SEEEEEESC
T ss_pred CCCeEEEECCCccHHHHHHHHhCC-cEEEEEeCCHHHHHHHHHHHhhCC---CceEEEeeh
Confidence 346999999999999988876554 489999999999999999998775 357777765
No 210
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.87 E-value=4.7e-08 Score=96.10 Aligned_cols=60 Identities=10% Similarity=0.009 Sum_probs=55.1
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
..+|||||||+|.+...++.++|+.+++++|+ +.+++.|++++...+ +.++|+++..|..
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~-~~~~v~~~~~d~~ 239 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHD-LGGRVEFFEKNLL 239 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTT-CGGGEEEEECCTT
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcC-CCCceEEEeCCcc
Confidence 57999999999999999999999999999999 889999999999886 8889999998854
No 211
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.86 E-value=1.3e-08 Score=94.41 Aligned_cols=41 Identities=22% Similarity=0.375 Sum_probs=36.4
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHH
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKN 158 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N 158 (414)
..+|||||||+|.++..++.. +.+++|+|+|+.+++.|+++
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~ 82 (240)
T 3dli_A 42 CRRVLDIGCGRGEFLELCKEE--GIESIGVDINEDMIKFCEGK 82 (240)
T ss_dssp CSCEEEETCTTTHHHHHHHHH--TCCEEEECSCHHHHHHHHTT
T ss_pred CCeEEEEeCCCCHHHHHHHhC--CCcEEEEECCHHHHHHHHhh
Confidence 468999999999999888775 67899999999999998876
No 212
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.86 E-value=9.1e-09 Score=97.17 Aligned_cols=52 Identities=17% Similarity=-0.001 Sum_probs=43.1
Q ss_pred CCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
...+|||||||+|.++..++. ++.+|+|+|+|+.+++.|+++. +++++..|.
T Consensus 34 ~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~--------~~~~~~~d~ 85 (261)
T 3ege_A 34 KGSVIADIGAGTGGYSVALAN--QGLFVYAVEPSIVMRQQAVVHP--------QVEWFTGYA 85 (261)
T ss_dssp TTCEEEEETCTTSHHHHHHHT--TTCEEEEECSCHHHHHSSCCCT--------TEEEECCCT
T ss_pred CCCEEEEEcCcccHHHHHHHh--CCCEEEEEeCCHHHHHHHHhcc--------CCEEEECch
Confidence 346999999999999998886 7789999999999998876543 478877764
No 213
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.85 E-value=8.8e-09 Score=96.05 Aligned_cols=47 Identities=26% Similarity=0.176 Sum_probs=40.0
Q ss_pred CCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHC
Q 015035 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSN 162 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n 162 (414)
.+.+|||||||+|.++..++...+ .+|+|+|+|+.+++.|++++..+
T Consensus 56 ~~~~vLDlGcG~G~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~ 102 (265)
T 2i62_A 56 KGELLIDIGSGPTIYQLLSACESF-TEIIVSDYTDQNLWELQKWLKKE 102 (265)
T ss_dssp CEEEEEEESCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCccHHHHHHhhccc-CeEEEecCCHHHHHHHHHHHhcC
Confidence 346899999999999888776544 58999999999999999998755
No 214
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.85 E-value=5.9e-09 Score=105.64 Aligned_cols=58 Identities=10% Similarity=0.102 Sum_probs=49.1
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
...|||||||+|.+++.+|+ ....+|+|+|.|+ +++.|+++++.|+ ++++|++++++.
T Consensus 84 ~k~VLDvG~GtGiLs~~Aa~-aGA~~V~ave~s~-~~~~a~~~~~~n~-~~~~i~~i~~~~ 141 (376)
T 4hc4_A 84 GKTVLDVGAGTGILSIFCAQ-AGARRVYAVEASA-IWQQAREVVRFNG-LEDRVHVLPGPV 141 (376)
T ss_dssp TCEEEEETCTTSHHHHHHHH-TTCSEEEEEECST-THHHHHHHHHHTT-CTTTEEEEESCT
T ss_pred CCEEEEeCCCccHHHHHHHH-hCCCEEEEEeChH-HHHHHHHHHHHcC-CCceEEEEeeee
Confidence 35899999999999876554 3334899999997 7899999999996 999999999875
No 215
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.85 E-value=6.8e-08 Score=96.40 Aligned_cols=60 Identities=17% Similarity=0.113 Sum_probs=55.1
Q ss_pred CCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
...+|||||||+|.++..++.++|+.+++++|+ +.+++.|++++...+ +.++|+++..|.
T Consensus 202 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~-l~~~v~~~~~d~ 261 (369)
T 3gwz_A 202 GAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRG-LADRCEILPGDF 261 (369)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTT-CTTTEEEEECCT
T ss_pred cCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcC-cCCceEEeccCC
Confidence 347999999999999999999999999999999 999999999999885 888999998874
No 216
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=98.85 E-value=1.8e-08 Score=98.48 Aligned_cols=59 Identities=17% Similarity=0.160 Sum_probs=51.6
Q ss_pred CCeEEEECCcccHHHHHHHHHhc-CCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLL-GWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~-~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
+.+|||||||+|.++..++...+ +.+|+|+|+|+.+++.|++|++.++ +.+ ++++..|.
T Consensus 76 ~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g-~~~-v~~~~~d~ 135 (317)
T 1dl5_A 76 GMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLG-IEN-VIFVCGDG 135 (317)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTT-CCS-EEEEESCG
T ss_pred cCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcC-CCC-eEEEECCh
Confidence 46999999999999999998776 4789999999999999999999885 654 89888774
No 217
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=98.84 E-value=5.1e-09 Score=97.99 Aligned_cols=59 Identities=15% Similarity=0.107 Sum_probs=48.5
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCc-HHHHHHH---HHHHHHCCCCCCcEEEEEccC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMT-DVALEWA---EKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis-~~Al~~A---~~N~~~n~~l~~rI~~~~~d~ 176 (414)
..+|||||||+|.++..|+.+.++.+|+|+|+| +.+++.| +++++..+ +. ++.++++|.
T Consensus 25 ~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~-~~-~v~~~~~d~ 87 (225)
T 3p2e_A 25 DRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGG-LS-NVVFVIAAA 87 (225)
T ss_dssp SEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTC-CS-SEEEECCBT
T ss_pred CCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcC-CC-CeEEEEcCH
Confidence 358999999999999999987889999999999 5555555 88888775 53 688887764
No 218
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=98.83 E-value=4.8e-08 Score=90.74 Aligned_cols=85 Identities=14% Similarity=0.204 Sum_probs=63.2
Q ss_pred EEEecCCCeeCCCCCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHH
Q 015035 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWA 155 (414)
Q Consensus 76 ~~~vp~gvLiPriP~R~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A 155 (414)
...+..+..+.. ...+.++.+.+.. ....+|||||||+|.++..++...+ .+++++|+++.+++.|
T Consensus 65 ~~~~~~~~~~~~----~~~~~~~~~~l~~---------~~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a 130 (235)
T 1jg1_A 65 PLPIPAGQTVSA----PHMVAIMLEIANL---------KPGMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFA 130 (235)
T ss_dssp CEECSTTCEECC----HHHHHHHHHHHTC---------CTTCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHH
T ss_pred CcccCCCceecc----HHHHHHHHHhcCC---------CCCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHH
Confidence 344555555543 3344555555532 1345899999999999999998776 7999999999999999
Q ss_pred HHHHHHCCCCCCcEEEEEccC
Q 015035 156 EKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 156 ~~N~~~n~~l~~rI~~~~~d~ 176 (414)
++|++.++ +. +++++..|.
T Consensus 131 ~~~~~~~~-~~-~v~~~~~d~ 149 (235)
T 1jg1_A 131 KRNLERAG-VK-NVHVILGDG 149 (235)
T ss_dssp HHHHHHTT-CC-SEEEEESCG
T ss_pred HHHHHHcC-CC-CcEEEECCc
Confidence 99999885 64 488887763
No 219
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.83 E-value=1.1e-07 Score=92.96 Aligned_cols=59 Identities=14% Similarity=0.011 Sum_probs=54.4
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
..+|||||||+|.++..++.++|+.+++++|+ +.+++.|++++...+ +.++|+++..|.
T Consensus 170 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~-~~~~v~~~~~d~ 228 (332)
T 3i53_A 170 LGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTG-LSGRAQVVVGSF 228 (332)
T ss_dssp GSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTT-CTTTEEEEECCT
T ss_pred CCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcC-cCcCeEEecCCC
Confidence 46999999999999999999999999999999 999999999999885 888999998874
No 220
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.82 E-value=1e-08 Score=97.31 Aligned_cols=45 Identities=29% Similarity=0.232 Sum_probs=36.6
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCC-eeEEecCcHHHHHHHHHHHHHC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGW-SFVGSDMTDVALEWAEKNVKSN 162 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~-~vvgvDis~~Al~~A~~N~~~n 162 (414)
+.+|||||||+|...+.++. .+. +|+|+|+|+.+++.|+++++.+
T Consensus 56 g~~vLDiGCG~G~~~~~~~~--~~~~~v~g~D~s~~~l~~a~~~~~~~ 101 (263)
T 2a14_A 56 GDTLIDIGSGPTIYQVLAAC--DSFQDITLSDFTDRNREELEKWLKKE 101 (263)
T ss_dssp EEEEEESSCTTCCGGGTTGG--GTEEEEEEEESCHHHHHHHHHHHHTC
T ss_pred CceEEEeCCCccHHHHHHHH--hhhcceeeccccHHHHHHHHHHHhcC
Confidence 46899999999976655443 333 7999999999999999998765
No 221
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.82 E-value=2.4e-08 Score=97.46 Aligned_cols=58 Identities=19% Similarity=0.043 Sum_probs=53.1
Q ss_pred CeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 117 VKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 117 ~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
.+|||||||+|.++..++.++|+.+++++|+ +.+++.|++++...+ +.++|+++..|.
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~-~~~~v~~~~~d~ 226 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLL-AGERVSLVGGDM 226 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHH-HTTSEEEEESCT
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcC-CCCcEEEecCCC
Confidence 7999999999999999999889999999999 999999999998774 777899998874
No 222
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.80 E-value=4.3e-08 Score=97.61 Aligned_cols=61 Identities=16% Similarity=-0.033 Sum_probs=55.4
Q ss_pred CCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
...+|||||||+|.++..+++++|+.+++++|+ +.+++.|++++...+ +.++|+++..|..
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~-~~~~v~~~~~d~~ 239 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLS-GSERIHGHGANLL 239 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCT-TGGGEEEEECCCC
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcC-cccceEEEEcccc
Confidence 346999999999999999999999999999999 999999999999885 7789999998854
No 223
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.80 E-value=1.2e-08 Score=99.26 Aligned_cols=56 Identities=18% Similarity=0.198 Sum_probs=47.1
Q ss_pred CCeEEEECCcccHHHHHHHHHhcC--CeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLG--WSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~--~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
..+|||||||+|.++..|+.+... .+|+|+|+|+++++.|+++. . .+++++++|..
T Consensus 43 ~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~--~----~~v~~i~~D~~ 100 (279)
T 3uzu_A 43 GERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF--G----ELLELHAGDAL 100 (279)
T ss_dssp TCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH--G----GGEEEEESCGG
T ss_pred cCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc--C----CCcEEEECChh
Confidence 468999999999999999886542 45999999999999999994 2 36999999854
No 224
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.79 E-value=5.3e-08 Score=94.22 Aligned_cols=62 Identities=11% Similarity=0.037 Sum_probs=50.7
Q ss_pred CCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCC-CC-CCcEEEEEccC
Q 015035 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNP-HI-SELIEIRKVDN 176 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~-~l-~~rI~~~~~d~ 176 (414)
.+.+|||||||+|.++..+++..+..+++++|+|+.+++.|++++..++ .+ ..+++++..|.
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~ 141 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDA 141 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCH
T ss_pred CCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECCh
Confidence 3469999999999999988876667899999999999999999986531 02 35789988774
No 225
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.79 E-value=4.2e-10 Score=106.15 Aligned_cols=56 Identities=13% Similarity=0.162 Sum_probs=46.9
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
..+|||||||+|.++..|+... .+++|+|+|+.+++.|++|++. .++++++++|..
T Consensus 30 ~~~VLDiG~G~G~~~~~l~~~~--~~v~~id~~~~~~~~a~~~~~~----~~~v~~~~~D~~ 85 (245)
T 1yub_A 30 TDTVYEIGTGKGHLTTKLAKIS--KQVTSIELDSHLFNLSSEKLKL----NTRVTLIHQDIL 85 (245)
T ss_dssp SEEEEECSCCCSSCSHHHHHHS--SEEEESSSSCSSSSSSSCTTTT----CSEEEECCSCCT
T ss_pred CCEEEEEeCCCCHHHHHHHHhC--CeEEEEECCHHHHHHHHHHhcc----CCceEEEECChh
Confidence 4589999999999999888763 7999999999999999988762 247888887753
No 226
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.79 E-value=5.5e-08 Score=85.06 Aligned_cols=51 Identities=16% Similarity=0.039 Sum_probs=42.3
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEcc
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVD 175 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d 175 (414)
..+|||||||+|.++..++.... +++|+|+++.+++.|+++ . .+++++..|
T Consensus 18 ~~~vLDiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~---~----~~v~~~~~d 68 (170)
T 3i9f_A 18 KGVIVDYGCGNGFYCKYLLEFAT--KLYCIDINVIALKEVKEK---F----DSVITLSDP 68 (170)
T ss_dssp CEEEEEETCTTCTTHHHHHTTEE--EEEEECSCHHHHHHHHHH---C----TTSEEESSG
T ss_pred CCeEEEECCCCCHHHHHHHhhcC--eEEEEeCCHHHHHHHHHh---C----CCcEEEeCC
Confidence 46899999999999998887653 999999999999999998 2 246766554
No 227
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.79 E-value=5.1e-08 Score=87.02 Aligned_cols=154 Identities=11% Similarity=0.070 Sum_probs=95.2
Q ss_pred CCeEEEECCcccHHHHHHHHHhcC---------CeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEE-EccCCCCCCcccc
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLG---------WSFVGSDMTDVALEWAEKNVKSNPHISELIEIR-KVDNSESTPSIQE 185 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~---------~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~-~~d~~~~~p~~~~ 185 (414)
..+|||||||+|.++..|+.+.+. .+|+|+|+++.+ . + .+++++ +.|.... .
T Consensus 23 ~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~-~-~~~~~~~~~d~~~~--~--- 84 (196)
T 2nyu_A 23 GLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------P-L-EGATFLCPADVTDP--R--- 84 (196)
T ss_dssp TCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------C-C-TTCEEECSCCTTSH--H---
T ss_pred CCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------c-C-CCCeEEEeccCCCH--H---
Confidence 468999999999999999988654 799999999831 1 2 246666 5553210 0
Q ss_pred cccCCccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccccccccCCCccc
Q 015035 186 SLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTS 265 (414)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a 265 (414)
.. ..+.... .+++||+|+||+++.......
T Consensus 85 ----------------------------------~~--------~~~~~~~-~~~~fD~V~~~~~~~~~~~~~------- 114 (196)
T 2nyu_A 85 ----------------------------------TS--------QRILEVL-PGRRADVILSDMAPNATGFRD------- 114 (196)
T ss_dssp ----------------------------------HH--------HHHHHHS-GGGCEEEEEECCCCCCCSCHH-------
T ss_pred ----------------------------------HH--------HHHHHhc-CCCCCcEEEeCCCCCCCCCcc-------
Confidence 00 0000001 135799999998653221000
Q ss_pred cCCCCCcccccCChHHHHHHHHHHHHHhhccCcEEEEEeCCcCCHHHHHHHHHHcCCceEEEEEecCCC---eeEEEEEE
Q 015035 266 CGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQ---TCRWGLAW 342 (414)
Q Consensus 266 ~~g~~~Em~~~GGe~~Fv~rii~eS~~l~~~~~w~t~mvgk~~~l~~l~~~l~~~g~~~v~~~e~~qG~---t~Rw~lAW 342 (414)
.+ ..........+++++..+++++|++.+.+........+...+++. +..+++.++..++ ..+++++-
T Consensus 115 ----~~----~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~-f~~v~~~~~~~~~~~~~e~~~v~~ 185 (196)
T 2nyu_A 115 ----LD----HDRLISLCLTLLSVTPDILQPGGTFLCKTWAGSQSRRLQRRLTEE-FQNVRIIKPEASRKESSEVYFLAT 185 (196)
T ss_dssp ----HH----HHHHHHHHHHHHHHHHHHEEEEEEEEEEECCSGGGHHHHHHHHHH-EEEEEEECCC--------EEEEEE
T ss_pred ----cC----HHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCccHHHHHHHHHHH-hcceEEECCcccCccCceEEEEee
Confidence 00 000133456788888899999999887766666778888888774 6677777776665 34666666
Q ss_pred Eecc
Q 015035 343 SFVP 346 (414)
Q Consensus 343 sf~~ 346 (414)
-|..
T Consensus 186 g~~~ 189 (196)
T 2nyu_A 186 QYHG 189 (196)
T ss_dssp EECC
T ss_pred ecCC
Confidence 6653
No 228
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=98.79 E-value=1.5e-08 Score=99.61 Aligned_cols=85 Identities=12% Similarity=0.100 Sum_probs=62.9
Q ss_pred CeeCCCCCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHC
Q 015035 83 QLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSN 162 (414)
Q Consensus 83 vLiPriP~R~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n 162 (414)
.|... |--.+|+..+...+....+ ..+.+|||||||+|.++..++++.++++|+|+|+|+++++.|++|++..
T Consensus 97 ~l~~f-py~~~~~~l~~~E~~la~l------~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~ 169 (298)
T 3fpf_A 97 TLRSF-YFYPRYLELLKNEAALGRF------RRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGL 169 (298)
T ss_dssp HHHTS-TTHHHHHHHHHHHHHHTTC------CTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHH
T ss_pred hhccC-CCcccHHHHHHHHHHHcCC------CCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhc
Confidence 45544 4455677666433322112 2457999999999977655555668999999999999999999999988
Q ss_pred CCCCCcEEEEEccC
Q 015035 163 PHISELIEIRKVDN 176 (414)
Q Consensus 163 ~~l~~rI~~~~~d~ 176 (414)
+ + ++|+++++|.
T Consensus 170 g-l-~~v~~v~gDa 181 (298)
T 3fpf_A 170 G-V-DGVNVITGDE 181 (298)
T ss_dssp T-C-CSEEEEESCG
T ss_pred C-C-CCeEEEECch
Confidence 6 7 7999998874
No 229
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.74 E-value=1.8e-08 Score=96.25 Aligned_cols=55 Identities=15% Similarity=0.090 Sum_probs=46.2
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
..+|||||||+|.++..|+.+ +..+++|+|+|+.+++.|++| . . .+++++++|..
T Consensus 32 ~~~VLDiG~G~G~lt~~L~~~-~~~~v~avEid~~~~~~~~~~-~-~----~~v~~i~~D~~ 86 (249)
T 3ftd_A 32 GNTVVEVGGGTGNLTKVLLQH-PLKKLYVIELDREMVENLKSI-G-D----ERLEVINEDAS 86 (249)
T ss_dssp TCEEEEEESCHHHHHHHHTTS-CCSEEEEECCCHHHHHHHTTS-C-C----TTEEEECSCTT
T ss_pred cCEEEEEcCchHHHHHHHHHc-CCCeEEEEECCHHHHHHHHhc-c-C----CCeEEEEcchh
Confidence 468999999999999988875 447999999999999999988 2 1 36899988854
No 230
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=98.74 E-value=5.9e-08 Score=88.54 Aligned_cols=60 Identities=12% Similarity=-0.013 Sum_probs=48.1
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHH----HHCCCCCCcEEEEEccCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNV----KSNPHISELIEIRKVDNS 177 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~----~~n~~l~~rI~~~~~d~~ 177 (414)
..+|||||||+|.++..|+...|+.+|+|+|+|+.+++.+.+++ ...+ + .+++++++|..
T Consensus 28 ~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~-~-~~v~~~~~d~~ 91 (218)
T 3mq2_A 28 DDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGG-L-PNLLYLWATAE 91 (218)
T ss_dssp SEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTC-C-TTEEEEECCST
T ss_pred CCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcC-C-CceEEEecchh
Confidence 46899999999999999999888999999999999888644433 3342 3 37899888753
No 231
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=98.72 E-value=4.3e-07 Score=86.07 Aligned_cols=59 Identities=10% Similarity=0.010 Sum_probs=45.5
Q ss_pred CCCeEEEECCcccHHHHHHHHHh-cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 115 DKVKGFDIGTGANCIYPLLGASL-LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~-~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
...+|||+|||+|.....++... +..+|+|+|+++.+++...+.++.. .+|.++.+|..
T Consensus 76 ~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r----~nv~~i~~Da~ 135 (232)
T 3id6_C 76 KGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR----PNIFPLLADAR 135 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC----TTEEEEECCTT
T ss_pred CCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc----CCeEEEEcccc
Confidence 34699999999999998888764 4679999999999986555544443 25888888753
No 232
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=98.72 E-value=7.7e-08 Score=88.43 Aligned_cols=55 Identities=20% Similarity=0.229 Sum_probs=47.8
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
..+|||||||+|.++..++... .+++|+|+++.+++.|++++..++ +++++..|.
T Consensus 71 ~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~----~v~~~~~d~ 125 (231)
T 1vbf_A 71 GQKVLEIGTGIGYYTALIAEIV--DKVVSVEINEKMYNYASKLLSYYN----NIKLILGDG 125 (231)
T ss_dssp TCEEEEECCTTSHHHHHHHHHS--SEEEEEESCHHHHHHHHHHHTTCS----SEEEEESCG
T ss_pred CCEEEEEcCCCCHHHHHHHHHc--CEEEEEeCCHHHHHHHHHHHhhcC----CeEEEECCc
Confidence 4689999999999999888764 799999999999999999997663 688888764
No 233
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.71 E-value=1.4e-07 Score=87.10 Aligned_cols=60 Identities=15% Similarity=0.205 Sum_probs=49.5
Q ss_pred CCeEEEECCcccHHHHHHHHHhc------CCeeEEecCcHHHHHHHHHHHHHCCCC----CCcEEEEEccC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLL------GWSFVGSDMTDVALEWAEKNVKSNPHI----SELIEIRKVDN 176 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~------~~~vvgvDis~~Al~~A~~N~~~n~~l----~~rI~~~~~d~ 176 (414)
..+|||||||+|.++..++.... ..+|+++|+++.+++.|++|++.++ + ..+++++..|.
T Consensus 85 ~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~-~~~~~~~~v~~~~~d~ 154 (227)
T 1r18_A 85 GARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDD-RSMLDSGQLLIVEGDG 154 (227)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHH-HHHHHHTSEEEEESCG
T ss_pred CCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcC-ccccCCCceEEEECCc
Confidence 46999999999999999888654 3699999999999999999998652 1 24688888764
No 234
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.71 E-value=7.1e-08 Score=102.09 Aligned_cols=118 Identities=24% Similarity=0.333 Sum_probs=69.9
Q ss_pred CCCCCCCCCCCCCHHHHHhhCCCcccceeecCCCCceeeCCChHhHHHHHHHHhhhcCCcEEEecCCCeeCCCCCcHhHH
Q 015035 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYI 95 (414)
Q Consensus 16 mHprN~y~~~~~dF~~La~~yp~~~~~v~~~~~g~~~iDf~~~~a~r~Lt~~LL~~~fgl~~~vp~gvLiPriP~R~~yi 95 (414)
-|..|.|....-+-..+.+..|+.-+-++ |... |.+. ..+ ....|++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~pe~y~~i~----~~~~--~~~~----------------------~~r---~~~~r~~~i 53 (569)
T 4azs_A 5 HHHENLYFQGTKDLNTLVSELPEIYQTIF----GHPE--WDGD----------------------AAR---DCNQRLDLI 53 (569)
T ss_dssp ------------CHHHHHHHSSCCCBCCT----TCGG--GTTT----------------------CSB---CCHHHHHHH
T ss_pred cccccccccccccHHHHHhhCHHHHhhhc----CChh--hccc----------------------ccc---chHHHHHHH
Confidence 36778887766788888888876433222 1111 1110 000 112355665
Q ss_pred HHHHHHHccCCCCCCCCCCCCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEcc
Q 015035 96 HWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVD 175 (414)
Q Consensus 96 ~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d 175 (414)
....+.+... -+++.+|||||||.|.++..||. .+++|+|+|+++.+++.|+..+..++.+ .|++++.+
T Consensus 54 ~~~~~~~~~~-------~~~~~~vLDvGCG~G~~~~~la~--~ga~V~giD~~~~~i~~a~~~a~~~~~~--~~~~~~~~ 122 (569)
T 4azs_A 54 TEQYDNLSRA-------LGRPLNVLDLGCAQGFFSLSLAS--KGATIVGIDFQQENINVCRALAEENPDF--AAEFRVGR 122 (569)
T ss_dssp HHHHHHHHHH-------HTSCCEEEEETCTTSHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHHTSTTS--EEEEEECC
T ss_pred HHHHHHHHhh-------cCCCCeEEEECCCCcHHHHHHHh--CCCEEEEECCCHHHHHHHHHHHHhcCCC--ceEEEECC
Confidence 4444433321 03457999999999999999986 4789999999999999999999887523 58888876
No 235
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=98.71 E-value=1.6e-07 Score=89.58 Aligned_cols=60 Identities=12% Similarity=0.049 Sum_probs=46.8
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHH---------CCC------CCCcEEEEEccCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKS---------NPH------ISELIEIRKVDNS 177 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~---------n~~------l~~rI~~~~~d~~ 177 (414)
+.+|||+|||+|..+..|+.. +++|+|+|+|+.|++.|++.... .+. ...+|+++++|..
T Consensus 69 ~~~vLD~GCG~G~~~~~La~~--G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~ 143 (252)
T 2gb4_A 69 GLRVFFPLCGKAIEMKWFADR--GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIF 143 (252)
T ss_dssp SCEEEETTCTTCTHHHHHHHT--TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTT
T ss_pred CCeEEEeCCCCcHHHHHHHHC--CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccc
Confidence 469999999999999988874 78999999999999999876531 000 1246888888753
No 236
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.70 E-value=2e-08 Score=97.38 Aligned_cols=44 Identities=20% Similarity=0.284 Sum_probs=38.4
Q ss_pred CCeEEEECCcccH----HHHHHHHHhc----CCeeEEecCcHHHHHHHHHHH
Q 015035 116 KVKGFDIGTGANC----IYPLLGASLL----GWSFVGSDMTDVALEWAEKNV 159 (414)
Q Consensus 116 ~~~vLDIGtGsG~----I~i~La~~~~----~~~vvgvDis~~Al~~A~~N~ 159 (414)
..+|+|+|||||. |++.|+...+ +++|+|+|||+.||+.|++++
T Consensus 106 ~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~ 157 (274)
T 1af7_A 106 EYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGI 157 (274)
T ss_dssp CEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTE
T ss_pred CcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcC
Confidence 4699999999999 7777777655 579999999999999999986
No 237
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.70 E-value=7.6e-09 Score=99.10 Aligned_cols=55 Identities=9% Similarity=-0.055 Sum_probs=43.9
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
..+|||||||+|.+.. ++. ....+|+|+|+|+.+++.|+++...+ ++++++++|.
T Consensus 22 ~~~VLEIG~G~G~lt~-l~~-~~~~~v~avEid~~~~~~a~~~~~~~----~~v~~i~~D~ 76 (252)
T 1qyr_A 22 GQAMVEIGPGLAALTE-PVG-ERLDQLTVIELDRDLAARLQTHPFLG----PKLTIYQQDA 76 (252)
T ss_dssp TCCEEEECCTTTTTHH-HHH-TTCSCEEEECCCHHHHHHHHTCTTTG----GGEEEECSCG
T ss_pred cCEEEEECCCCcHHHH-hhh-CCCCeEEEEECCHHHHHHHHHHhccC----CceEEEECch
Confidence 3589999999999998 653 32223999999999999999887543 3689998875
No 238
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.69 E-value=1.2e-07 Score=86.82 Aligned_cols=46 Identities=22% Similarity=0.280 Sum_probs=37.8
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
..+|||||||+|.++..++.. +|+|+++.+++.|+++ + +.++..|.
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~------~~vD~s~~~~~~a~~~----~-----~~~~~~d~ 93 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK------IGVEPSERMAEIARKR----G-----VFVLKGTA 93 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC------EEEESCHHHHHHHHHT----T-----CEEEECBT
T ss_pred CCcEEEeCCCCCHHHHHHHHH------hccCCCHHHHHHHHhc----C-----CEEEEccc
Confidence 358999999999998877653 9999999999999887 2 56777664
No 239
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.69 E-value=1.4e-07 Score=85.42 Aligned_cols=43 Identities=19% Similarity=0.224 Sum_probs=37.4
Q ss_pred CCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHH
Q 015035 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNV 159 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~ 159 (414)
...+|||||||+|.++..++.. +.+++|+|+++.+++.|+++.
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~--~~~~~~~D~~~~~~~~~~~~~ 74 (230)
T 3cc8_A 32 EWKEVLDIGCSSGALGAAIKEN--GTRVSGIEAFPEAAEQAKEKL 74 (230)
T ss_dssp TCSEEEEETCTTSHHHHHHHTT--TCEEEEEESSHHHHHHHHTTS
T ss_pred CCCcEEEeCCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHHhC
Confidence 3469999999999999988876 489999999999999987653
No 240
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=98.66 E-value=1.8e-08 Score=94.77 Aligned_cols=54 Identities=13% Similarity=0.030 Sum_probs=46.0
Q ss_pred CeEEEECCcccHHHHHHHHH----hcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 117 VKGFDIGTGANCIYPLLGAS----LLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 117 ~~vLDIGtGsG~I~i~La~~----~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
.+|||||||+|.++..|+.. .++.+|+|+|+++.+++.|+ + +..+|+++++|..
T Consensus 83 ~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~------~-~~~~v~~~~gD~~ 140 (236)
T 2bm8_A 83 RTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA------S-DMENITLHQGDCS 140 (236)
T ss_dssp SEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG------G-GCTTEEEEECCSS
T ss_pred CEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh------c-cCCceEEEECcch
Confidence 58999999999999999886 46789999999999999887 1 3357999998753
No 241
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=98.66 E-value=1.1e-07 Score=97.98 Aligned_cols=60 Identities=15% Similarity=0.077 Sum_probs=52.2
Q ss_pred CCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHH-------HHHHHHCCCCC-CcEEEEEcc
Q 015035 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWA-------EKNVKSNPHIS-ELIEIRKVD 175 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A-------~~N~~~n~~l~-~rI~~~~~d 175 (414)
...+|||||||+|.+++.+|...+..+|+|+|+++.+++.| ++|++.++ +. .+|+++++|
T Consensus 242 ~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~G-l~~~nV~~i~gD 309 (433)
T 1u2z_A 242 KGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYG-MRLNNVEFSLKK 309 (433)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTT-BCCCCEEEEESS
T ss_pred CCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcC-CCCCceEEEEcC
Confidence 34689999999999999999877767899999999999999 99998885 64 689998875
No 242
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.65 E-value=4e-07 Score=83.43 Aligned_cols=52 Identities=13% Similarity=0.155 Sum_probs=44.0
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
..+|||||||+|.++..++...+ +++|+|+|+.+++.|+++. .++.++..|.
T Consensus 41 ~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~s~~~~~~a~~~~-------~~~~~~~~d~ 92 (239)
T 3bxo_A 41 ASSLLDVACGTGTHLEHFTKEFG--DTAGLELSEDMLTHARKRL-------PDATLHQGDM 92 (239)
T ss_dssp CCEEEEETCTTSHHHHHHHHHHS--EEEEEESCHHHHHHHHHHC-------TTCEEEECCT
T ss_pred CCeEEEecccCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhC-------CCCEEEECCH
Confidence 46899999999999999888754 8999999999999999874 1367777764
No 243
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.65 E-value=1.2e-07 Score=92.87 Aligned_cols=142 Identities=13% Similarity=0.046 Sum_probs=92.4
Q ss_pred CCeEEEECCcc------cHHHHHHHHHhc-CCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEE-EEccCCCCCCcccccc
Q 015035 116 KVKGFDIGTGA------NCIYPLLGASLL-GWSFVGSDMTDVALEWAEKNVKSNPHISELIEI-RKVDNSESTPSIQESL 187 (414)
Q Consensus 116 ~~~vLDIGtGs------G~I~i~La~~~~-~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~-~~~d~~~~~p~~~~~~ 187 (414)
..+|||||||+ |. ..++...+ +.+|+|+|+++. + . ++++ +++|..+
T Consensus 64 g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~--------v--~-----~v~~~i~gD~~~--------- 117 (290)
T 2xyq_A 64 NMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF--------V--S-----DADSTLIGDCAT--------- 117 (290)
T ss_dssp TCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC--------B--C-----SSSEEEESCGGG---------
T ss_pred CCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC--------C--C-----CCEEEEECcccc---------
Confidence 46899999944 76 34455555 689999999997 1 1 3566 7776421
Q ss_pred cCCccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccccccccCCCccccC
Q 015035 188 TGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCG 267 (414)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~ 267 (414)
+ . ..++||+|+||++.-.. +.. ...
T Consensus 118 --------------------------------------------~-~---~~~~fD~Vvsn~~~~~~----g~~---~~d 142 (290)
T 2xyq_A 118 --------------------------------------------V-H---TANKWDLIISDMYDPRT----KHV---TKE 142 (290)
T ss_dssp --------------------------------------------C-C---CSSCEEEEEECCCCCC-------C---CSC
T ss_pred --------------------------------------------C-C---ccCcccEEEEcCCcccc----ccc---ccc
Confidence 0 0 02579999999742111 100 000
Q ss_pred CCCCcccccCChHHHHHHHHHHHHHhhccCcEEEEEeCCcCCHHHHHHHHHHcCCceEEEEEecCCCeeEEEEEEEecc
Q 015035 268 GTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVP 346 (414)
Q Consensus 268 g~~~Em~~~GGe~~Fv~rii~eS~~l~~~~~w~t~mvgk~~~l~~l~~~l~~~g~~~v~~~e~~qG~t~Rw~lAWsf~~ 346 (414)
... ...++.++++++.++++++|+|.+.+-...+.+++.+.|++.|+..++++..-......++++..|..
T Consensus 143 -~~~-------~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~~~~l~~~l~~~GF~~v~~~asr~~s~e~~lv~~~~~~ 213 (290)
T 2xyq_A 143 -NDS-------KEGFFTYLCGFIKQKLALGGSIAVKITEHSWNADLYKLMGHFSWWTAFVTNVNASSSEAFLIGANYLG 213 (290)
T ss_dssp -CCC-------CCTHHHHHHHHHHHHEEEEEEEEEEECSSSCCHHHHHHHTTEEEEEEEEEGGGTTSSCEEEEEEEECS
T ss_pred -ccc-------hHHHHHHHHHHHHHhcCCCcEEEEEEeccCCHHHHHHHHHHcCCcEEEEEEcCCCchheEEecCCccC
Confidence 111 34577899999999999999998866556677899999999998777766111122345666666663
No 244
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.63 E-value=2.3e-08 Score=96.36 Aligned_cols=58 Identities=10% Similarity=0.081 Sum_probs=46.3
Q ss_pred CeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHC---C---C-CCCcEEEEEccC
Q 015035 117 VKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSN---P---H-ISELIEIRKVDN 176 (414)
Q Consensus 117 ~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n---~---~-l~~rI~~~~~d~ 176 (414)
.+|||+|||+|..++.+|.+ +.+|+++|+++.+++++++|++.. . + +.++|+++++|.
T Consensus 90 ~~VLDl~~G~G~dal~lA~~--g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~ 154 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASV--GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASS 154 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHH--TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCH
T ss_pred CEEEEcCCcCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCH
Confidence 68999999999999999875 668999999999888887776432 1 1 225799998874
No 245
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.59 E-value=1.3e-07 Score=87.60 Aligned_cols=55 Identities=24% Similarity=0.280 Sum_probs=46.8
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
..+|||||||+|.++..|+...+ +|+|+|+|+.+++.|+++... .+++++++|..
T Consensus 57 ~~~vLD~GcG~G~~~~~la~~~~--~v~gvD~s~~~~~~a~~~~~~-----~~~~~~~~d~~ 111 (245)
T 3ggd_A 57 ELPLIDFACGNGTQTKFLSQFFP--RVIGLDVSKSALEIAAKENTA-----ANISYRLLDGL 111 (245)
T ss_dssp TSCEEEETCTTSHHHHHHHHHSS--CEEEEESCHHHHHHHHHHSCC-----TTEEEEECCTT
T ss_pred CCeEEEEcCCCCHHHHHHHHhCC--CEEEEECCHHHHHHHHHhCcc-----cCceEEECccc
Confidence 46899999999999999988655 899999999999999998732 36899988754
No 246
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.58 E-value=9.1e-08 Score=90.11 Aligned_cols=54 Identities=20% Similarity=0.245 Sum_probs=45.6
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
..+|||||||+|.++..++...++.+++|+|+++.+++.|+++. .++.++..|.
T Consensus 86 ~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~-------~~~~~~~~d~ 139 (269)
T 1p91_A 86 ATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY-------PQVTFCVASS 139 (269)
T ss_dssp CCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC-------TTSEEEECCT
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC-------CCcEEEEcch
Confidence 46899999999999999988777889999999999999998874 1356776663
No 247
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.57 E-value=7.1e-07 Score=85.62 Aligned_cols=56 Identities=18% Similarity=0.174 Sum_probs=40.9
Q ss_pred CCeEEEECCcccHHHHHH----HHHhcCCee--EEecCcHHHHHHHHHHHHHCCCCCCcEEEE
Q 015035 116 KVKGFDIGTGANCIYPLL----GASLLGWSF--VGSDMTDVALEWAEKNVKSNPHISELIEIR 172 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~L----a~~~~~~~v--vgvDis~~Al~~A~~N~~~n~~l~~rI~~~ 172 (414)
+.+|||||||+|.++..+ +.+.+++.+ +|+|+|+.+++.|+++++..+++ .++.+.
T Consensus 53 ~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~-~~v~~~ 114 (292)
T 2aot_A 53 EIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNL-ENVKFA 114 (292)
T ss_dssp EEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSC-TTEEEE
T ss_pred CCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCC-CcceEE
Confidence 468999999999766433 334467755 99999999999999998754213 345544
No 248
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.54 E-value=4.6e-07 Score=87.64 Aligned_cols=61 Identities=16% Similarity=0.121 Sum_probs=48.9
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCC-----CCCcEEEEEccCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPH-----ISELIEIRKVDNS 177 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~-----l~~rI~~~~~d~~ 177 (414)
..+|||||||+|.+...++. .+..+++|+|+|+.+++.|+++....+. ...++.++..|..
T Consensus 35 ~~~VLDlGcG~G~~~~~l~~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~ 100 (313)
T 3bgv_A 35 DITVLDLGCGKGGDLLKWKK-GRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSS 100 (313)
T ss_dssp CCEEEEETCTTTTTHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTT
T ss_pred CCEEEEECCCCcHHHHHHHh-cCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEeccc
Confidence 46899999999999888876 4577999999999999999999875410 1236888888753
No 249
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=98.54 E-value=1.7e-07 Score=90.35 Aligned_cols=46 Identities=11% Similarity=-0.017 Sum_probs=40.6
Q ss_pred CCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHC
Q 015035 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSN 162 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n 162 (414)
...+|||||||+|.+++.|+.+ +.+|+|+|+|+.+++.|++|+..+
T Consensus 45 ~g~~VLDlGcGtG~~a~~La~~--g~~V~gvD~S~~ml~~Ar~~~~~~ 90 (261)
T 3iv6_A 45 PGSTVAVIGASTRFLIEKALER--GASVTVFDFSQRMCDDLAEALADR 90 (261)
T ss_dssp TTCEEEEECTTCHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTSSS
T ss_pred CcCEEEEEeCcchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHhc
Confidence 3469999999999999998874 679999999999999999998654
No 250
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.52 E-value=2e-07 Score=93.92 Aligned_cols=42 Identities=12% Similarity=0.115 Sum_probs=36.7
Q ss_pred CCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHH
Q 015035 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKN 158 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N 158 (414)
...+|||||||+|.+...++.. +++++|+|+|+.+++.|+++
T Consensus 107 ~~~~VLDiGcG~G~~~~~l~~~--g~~v~gvD~s~~~~~~a~~~ 148 (416)
T 4e2x_A 107 PDPFIVEIGCNDGIMLRTIQEA--GVRHLGFEPSSGVAAKAREK 148 (416)
T ss_dssp SSCEEEEETCTTTTTHHHHHHT--TCEEEEECCCHHHHHHHHTT
T ss_pred CCCEEEEecCCCCHHHHHHHHc--CCcEEEECCCHHHHHHHHHc
Confidence 3469999999999998888764 67999999999999999876
No 251
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=98.51 E-value=1.8e-07 Score=89.63 Aligned_cols=51 Identities=12% Similarity=0.017 Sum_probs=41.5
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
..+|||||||+|..+..|+.. +.+|+|+|+|+.+++.|++ + .+|.+++++.
T Consensus 40 ~~~vLDvGcGtG~~~~~l~~~--~~~v~gvD~s~~ml~~a~~----~----~~v~~~~~~~ 90 (257)
T 4hg2_A 40 RGDALDCGCGSGQASLGLAEF--FERVHAVDPGEAQIRQALR----H----PRVTYAVAPA 90 (257)
T ss_dssp SSEEEEESCTTTTTHHHHHTT--CSEEEEEESCHHHHHTCCC----C----TTEEEEECCT
T ss_pred CCCEEEEcCCCCHHHHHHHHh--CCEEEEEeCcHHhhhhhhh----c----CCceeehhhh
Confidence 358999999999999888864 4699999999999987753 2 3588888764
No 252
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.50 E-value=3.2e-07 Score=82.92 Aligned_cols=49 Identities=12% Similarity=0.146 Sum_probs=40.1
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCC-eeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGW-SFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~-~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
..+|||||||+|.++..+ +. +++|+|+|+.+++.|+++. . ++.+++.|.
T Consensus 37 ~~~vLdiG~G~G~~~~~l-----~~~~v~~vD~s~~~~~~a~~~~--~-----~~~~~~~d~ 86 (211)
T 2gs9_A 37 GESLLEVGAGTGYWLRRL-----PYPQKVGVEPSEAMLAVGRRRA--P-----EATWVRAWG 86 (211)
T ss_dssp CSEEEEETCTTCHHHHHC-----CCSEEEEECCCHHHHHHHHHHC--T-----TSEEECCCT
T ss_pred CCeEEEECCCCCHhHHhC-----CCCeEEEEeCCHHHHHHHHHhC--C-----CcEEEEccc
Confidence 468999999999887665 56 9999999999999999886 2 366766653
No 253
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.48 E-value=1e-07 Score=92.41 Aligned_cols=59 Identities=10% Similarity=0.054 Sum_probs=51.5
Q ss_pred CCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
.+.+|||||||.|-+++.++...+..+++|+|||+.+++.+++|+..++ +. .++...|.
T Consensus 132 ~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g-~~--~~~~v~D~ 190 (281)
T 3lcv_B 132 RPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLN-VP--HRTNVADL 190 (281)
T ss_dssp CCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTT-CC--EEEEECCT
T ss_pred CCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcC-CC--ceEEEeee
Confidence 3579999999999999988887789999999999999999999999996 65 56666664
No 254
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.47 E-value=2.4e-06 Score=82.10 Aligned_cols=57 Identities=12% Similarity=0.084 Sum_probs=48.7
Q ss_pred CeEEEECCcc---cHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 117 VKGFDIGTGA---NCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 117 ~~vLDIGtGs---G~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
.+|||||||+ |.+...++...|+.+|+++|+|+.+++.|++++..+ ++++++.+|..
T Consensus 79 ~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~----~~v~~~~~D~~ 138 (274)
T 2qe6_A 79 SQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKD----PNTAVFTADVR 138 (274)
T ss_dssp CEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTC----TTEEEEECCTT
T ss_pred CEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCC----CCeEEEEeeCC
Confidence 5899999999 988766666678899999999999999999998543 47999999864
No 255
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.46 E-value=2.1e-07 Score=102.44 Aligned_cols=75 Identities=12% Similarity=0.118 Sum_probs=56.4
Q ss_pred hHHHHHHHHHccCCCCCCCCCCCCCeEEEECCcccHHHHHHHHHh-cCCeeEEecCcHHHHHHHHHHHHHCC-----CCC
Q 015035 93 NYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASL-LGWSFVGSDMTDVALEWAEKNVKSNP-----HIS 166 (414)
Q Consensus 93 ~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~i~La~~~-~~~~vvgvDis~~Al~~A~~N~~~n~-----~l~ 166 (414)
..+.++.+++... ...+|||||||+|.++..|+... +..+|+|+|+|+.+++.|+++++... ++
T Consensus 708 qRle~LLelL~~~---------~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl- 777 (950)
T 3htx_A 708 QRVEYALKHIRES---------SASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNV- 777 (950)
T ss_dssp HHHHHHHHHHHHS---------CCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSC-
T ss_pred HHHHHHHHHhccc---------CCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCC-
Confidence 4455556666531 34699999999999999998766 45799999999999999999765321 13
Q ss_pred CcEEEEEccCC
Q 015035 167 ELIEIRKVDNS 177 (414)
Q Consensus 167 ~rI~~~~~d~~ 177 (414)
.+|+++++|..
T Consensus 778 ~nVefiqGDa~ 788 (950)
T 3htx_A 778 KSATLYDGSIL 788 (950)
T ss_dssp SEEEEEESCTT
T ss_pred CceEEEECchH
Confidence 47999988853
No 256
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.45 E-value=6.1e-07 Score=94.50 Aligned_cols=58 Identities=12% Similarity=0.052 Sum_probs=44.0
Q ss_pred CCeEEEECCcccHHHHHHHHHh-------------cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEcc
Q 015035 116 KVKGFDIGTGANCIYPLLGASL-------------LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVD 175 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~-------------~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d 175 (414)
..+|+|.+||||.+.+...... ....++|+|+++.++.+|+-|+..++ .. ...+...|
T Consensus 218 ~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg-~~-~~~I~~~d 288 (530)
T 3ufb_A 218 GESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHG-LE-YPRIDPEN 288 (530)
T ss_dssp TCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHT-CS-CCEEECSC
T ss_pred CCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcC-Cc-cccccccc
Confidence 4589999999999876655432 23579999999999999999998885 43 23455554
No 257
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.43 E-value=9.7e-07 Score=82.98 Aligned_cols=43 Identities=23% Similarity=0.253 Sum_probs=38.0
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHH
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVK 160 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~ 160 (414)
..+|||||||+|.++..++.. +.+++|+|+|+.+++.|+++..
T Consensus 55 ~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~ 97 (260)
T 2avn_A 55 PCRVLDLGGGTGKWSLFLQER--GFEVVLVDPSKEMLEVAREKGV 97 (260)
T ss_dssp CCEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHHTC
T ss_pred CCeEEEeCCCcCHHHHHHHHc--CCeEEEEeCCHHHHHHHHhhcC
Confidence 368999999999999888864 6799999999999999998854
No 258
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.41 E-value=2.5e-08 Score=94.08 Aligned_cols=43 Identities=14% Similarity=0.152 Sum_probs=36.7
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHH
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNV 159 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~ 159 (414)
..+|||||||+|.++..|++. ...+|+|+|+|+.+++.|+++.
T Consensus 38 g~~VLDiGcGtG~~t~~la~~-g~~~V~gvDis~~ml~~a~~~~ 80 (232)
T 3opn_A 38 GKTCLDIGSSTGGFTDVMLQN-GAKLVYALDVGTNQLAWKIRSD 80 (232)
T ss_dssp TCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSCCCCCHHHHTC
T ss_pred CCEEEEEccCCCHHHHHHHhc-CCCEEEEEcCCHHHHHHHHHhC
Confidence 468999999999999888875 3249999999999999987764
No 259
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.39 E-value=6.2e-07 Score=86.11 Aligned_cols=57 Identities=5% Similarity=-0.298 Sum_probs=46.2
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHH--CCCC-CCcEEEEEcc
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKS--NPHI-SELIEIRKVD 175 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~--n~~l-~~rI~~~~~d 175 (414)
+.+|||||||+|.++..+++. + .+++++|+|+.+++.|++++.. ++ + ..+++++.+|
T Consensus 73 ~~~VL~iG~G~G~~~~~ll~~-~-~~v~~veid~~~i~~ar~~~~~~~~~-~~~~rv~~~~~D 132 (262)
T 2cmg_A 73 LKEVLIVDGFDLELAHQLFKY-D-THIDFVQADEKILDSFISFFPHFHEV-KNNKNFTHAKQL 132 (262)
T ss_dssp CCEEEEESSCCHHHHHHHTTS-S-CEEEEECSCHHHHGGGTTTSTTHHHH-HTCTTEEEESSG
T ss_pred CCEEEEEeCCcCHHHHHHHhC-C-CEEEEEECCHHHHHHHHHHHHhhccc-cCCCeEEEEech
Confidence 469999999999999888876 6 8999999999999999987643 11 2 2478887665
No 260
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.38 E-value=1.8e-06 Score=85.22 Aligned_cols=57 Identities=12% Similarity=0.031 Sum_probs=45.2
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
..+|||||||+|.+...+++++|+.+++++|++ ..+. +++++..+ +.++|+++..|.
T Consensus 185 ~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~--~~~~~~~~-~~~~v~~~~~d~ 241 (348)
T 3lst_A 185 TGTVADVGGGRGGFLLTVLREHPGLQGVLLDRA-EVVA--RHRLDAPD-VAGRWKVVEGDF 241 (348)
T ss_dssp SEEEEEETCTTSHHHHHHHHHCTTEEEEEEECH-HHHT--TCCCCCGG-GTTSEEEEECCT
T ss_pred CceEEEECCccCHHHHHHHHHCCCCEEEEecCH-HHhh--cccccccC-CCCCeEEEecCC
Confidence 469999999999999999999999999999994 4444 44444443 567899998874
No 261
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.38 E-value=1.7e-06 Score=84.47 Aligned_cols=59 Identities=12% Similarity=-0.106 Sum_probs=42.5
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCC-----cEEEEEccC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISE-----LIEIRKVDN 176 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~-----rI~~~~~d~ 176 (414)
+.+|||||||+|.....++. ...++|+|+|+|+.+++.|++.....+ +.. .++++..+.
T Consensus 49 ~~~VLDlGCG~G~~l~~~~~-~~~~~v~GiD~S~~~l~~A~~~~~~~~-~~~~~~~~~~~f~~~d~ 112 (302)
T 2vdw_A 49 KRKVLAIDFGNGADLEKYFY-GEIALLVATDPDADAIARGNERYNKLN-SGIKTKYYKFDYIQETI 112 (302)
T ss_dssp CCEEEETTCTTTTTHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHHC-C----CCCEEEEEECCT
T ss_pred CCeEEEEecCCcHhHHHHHh-cCCCeEEEEECCHHHHHHHHHHHHhcc-ccccccccccchhhhhc
Confidence 46899999999964444443 245799999999999999999886553 321 256666654
No 262
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.33 E-value=1.3e-06 Score=83.88 Aligned_cols=56 Identities=14% Similarity=-0.034 Sum_probs=47.7
Q ss_pred CCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
.+.+|||||||+|.+++.+. ++.+++|+|||+.+++.|++|+..++ . ...+...|.
T Consensus 105 ~p~~VLDlGCG~gpLal~~~---~~~~y~a~DId~~~i~~ar~~~~~~g-~--~~~~~v~D~ 160 (253)
T 3frh_A 105 TPRRVLDIACGLNPLALYER---GIASVWGCDIHQGLGDVITPFAREKD-W--DFTFALQDV 160 (253)
T ss_dssp CCSEEEEETCTTTHHHHHHT---TCSEEEEEESBHHHHHHHHHHHHHTT-C--EEEEEECCT
T ss_pred CCCeEEEecCCccHHHHHhc---cCCeEEEEeCCHHHHHHHHHHHHhcC-C--CceEEEeec
Confidence 46799999999999987665 88899999999999999999999885 3 466777764
No 263
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.33 E-value=2.5e-06 Score=77.37 Aligned_cols=106 Identities=14% Similarity=0.217 Sum_probs=72.5
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccc
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~~~p~~~~~~~~~~~~~~ 195 (414)
..+|||||||+|.++..++ .+++|+|+++. + +.++..|..+
T Consensus 68 ~~~vLDiG~G~G~~~~~l~-----~~v~~~D~s~~-----------~------~~~~~~d~~~----------------- 108 (215)
T 2zfu_A 68 SLVVADFGCGDCRLASSIR-----NPVHCFDLASL-----------D------PRVTVCDMAQ----------------- 108 (215)
T ss_dssp TSCEEEETCTTCHHHHHCC-----SCEEEEESSCS-----------S------TTEEESCTTS-----------------
T ss_pred CCeEEEECCcCCHHHHHhh-----ccEEEEeCCCC-----------C------ceEEEecccc-----------------
Confidence 4689999999999887663 68999999987 1 3455555321
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccccccccCCCccccCCCCCcccc
Q 015035 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (414)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em~~ 275 (414)
+ . ..+++||+|+|+..+.. .+
T Consensus 109 ------------------------------------~-~--~~~~~fD~v~~~~~l~~----------------~~---- 129 (215)
T 2zfu_A 109 ------------------------------------V-P--LEDESVDVAVFCLSLMG----------------TN---- 129 (215)
T ss_dssp ------------------------------------C-S--CCTTCEEEEEEESCCCS----------------SC----
T ss_pred ------------------------------------C-C--CCCCCEeEEEEehhccc----------------cC----
Confidence 0 0 12468999999876531 01
Q ss_pred cCChHHHHHHHHHHHHHhhccCcEEEEE-eC-CcCCHHHHHHHHHHcCCceEE
Q 015035 276 SGGERAFITRIIEDSVALKQTFRWYTSM-VG-RKSNLKFLISKLRKVGVTIVK 326 (414)
Q Consensus 276 ~GGe~~Fv~rii~eS~~l~~~~~w~t~m-vg-k~~~l~~l~~~l~~~g~~~v~ 326 (414)
...++++...+++++|++.+. .. ...+...+.+.|++.|+..+.
T Consensus 130 -------~~~~l~~~~~~L~~gG~l~i~~~~~~~~~~~~~~~~l~~~Gf~~~~ 175 (215)
T 2zfu_A 130 -------IRDFLEEANRVLKPGGLLKVAEVSSRFEDVRTFLRAVTKLGFKIVS 175 (215)
T ss_dssp -------HHHHHHHHHHHEEEEEEEEEEECGGGCSCHHHHHHHHHHTTEEEEE
T ss_pred -------HHHHHHHHHHhCCCCeEEEEEEcCCCCCCHHHHHHHHHHCCCEEEE
Confidence 234556667778888876543 32 224789999999999997655
No 264
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.24 E-value=1e-05 Score=80.43 Aligned_cols=53 Identities=19% Similarity=0.022 Sum_probs=44.5
Q ss_pred CCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
...+|||||||+|.....++.+.|+.+++++|+ +.+++.|++ . .+|+++..|.
T Consensus 209 ~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~----~----~~v~~~~~d~ 261 (372)
T 1fp1_D 209 GISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPP----L----SGIEHVGGDM 261 (372)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC----C----TTEEEEECCT
T ss_pred CCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhh----c----CCCEEEeCCc
Confidence 346999999999999999999999999999999 999887753 1 2488888764
No 265
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.24 E-value=1.1e-05 Score=80.55 Aligned_cols=53 Identities=15% Similarity=0.100 Sum_probs=45.0
Q ss_pred CCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
...+|||||||+|.+...|++++|+.+++++|+ +.+++.|+++ .+|+++.+|.
T Consensus 203 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~--------~~v~~~~~d~ 255 (368)
T 3reo_A 203 GLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPAF--------SGVEHLGGDM 255 (368)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC--------TTEEEEECCT
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhhc--------CCCEEEecCC
Confidence 346999999999999999999999999999999 8888776531 4689988875
No 266
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.23 E-value=9.4e-06 Score=80.00 Aligned_cols=52 Identities=12% Similarity=0.038 Sum_probs=44.1
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
..+|||||||+|.+...++.++|+.+++++|+ +.+++.|++ . .+|+++..|.
T Consensus 189 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~----~~v~~~~~d~ 240 (352)
T 1fp2_A 189 LESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSG----S----NNLTYVGGDM 240 (352)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC----B----TTEEEEECCT
T ss_pred CceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhccc----C----CCcEEEeccc
Confidence 46999999999999999999899999999999 999887754 1 2388888764
No 267
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.19 E-value=3e-05 Score=76.89 Aligned_cols=59 Identities=17% Similarity=0.056 Sum_probs=51.4
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
..+|||||||+|.....|++++|+.+++..|. |.+++.|++++... ..+||+++.+|..
T Consensus 180 ~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~--~~~rv~~~~gD~~ 238 (353)
T 4a6d_A 180 FPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQ--EEEQIDFQEGDFF 238 (353)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC----CCSEEEEESCTT
T ss_pred CCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhc--ccCceeeecCccc
Confidence 35899999999999999999999999999998 88999999998754 4689999998854
No 268
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.15 E-value=1.8e-06 Score=83.06 Aligned_cols=31 Identities=10% Similarity=0.007 Sum_probs=27.5
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcH
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTD 149 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~ 149 (414)
..+|||||||+|..+..++.. .+|+|+|+++
T Consensus 75 g~~VLDlGcGtG~~s~~la~~---~~V~gvD~s~ 105 (265)
T 2oxt_A 75 TGRVVDLGCGRGGWSYYAASR---PHVMDVRAYT 105 (265)
T ss_dssp CEEEEEESCTTSHHHHHHHTS---TTEEEEEEEC
T ss_pred CCEEEEeCcCCCHHHHHHHHc---CcEEEEECch
Confidence 468999999999998888765 6899999998
No 269
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.13 E-value=4.6e-06 Score=81.68 Aligned_cols=41 Identities=15% Similarity=0.182 Sum_probs=34.6
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHH
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEK 157 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~ 157 (414)
..++||||||+|.++..|++. ...+|+|+|+++.+|++|.+
T Consensus 86 g~~vLDiGcGTG~~t~~L~~~-ga~~V~aVDvs~~mL~~a~r 126 (291)
T 3hp7_A 86 DMITIDIGASTGGFTDVMLQN-GAKLVYAVDVGTNQLVWKLR 126 (291)
T ss_dssp TCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSSSCSCHHHH
T ss_pred ccEEEecCCCccHHHHHHHhC-CCCEEEEEECCHHHHHHHHH
Confidence 468999999999999877764 44599999999999998654
No 270
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.12 E-value=1.5e-06 Score=84.17 Aligned_cols=31 Identities=13% Similarity=0.011 Sum_probs=27.6
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcH
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTD 149 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~ 149 (414)
..+|||||||+|..+..++.+ .+|+|+|+++
T Consensus 83 g~~VLDlGcGtG~~s~~la~~---~~V~gVD~s~ 113 (276)
T 2wa2_A 83 KGTVVDLGCGRGSWSYYAASQ---PNVREVKAYT 113 (276)
T ss_dssp CEEEEEESCTTCHHHHHHHTS---TTEEEEEEEC
T ss_pred CCEEEEeccCCCHHHHHHHHc---CCEEEEECch
Confidence 468999999999999888875 5899999998
No 271
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.07 E-value=2.7e-05 Score=76.90 Aligned_cols=52 Identities=13% Similarity=0.008 Sum_probs=43.0
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
..+|||||||+|.+...++.++|+.+++++|+ +.+++.|++ . .+|+++..|.
T Consensus 194 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~-~~v~~~~~d~ 245 (358)
T 1zg3_A 194 LESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG-------N-ENLNFVGGDM 245 (358)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC-------C-SSEEEEECCT
T ss_pred CCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc-------C-CCcEEEeCcc
Confidence 36899999999999999999999999999999 788876653 1 2488887764
No 272
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.02 E-value=4.4e-05 Score=76.05 Aligned_cols=54 Identities=15% Similarity=-0.007 Sum_probs=45.3
Q ss_pred CCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
...+|||||||+|.+...+++++|+.+++++|+ +.+++.|++ ..+|+++..|..
T Consensus 201 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~--------~~~v~~~~~D~~ 254 (364)
T 3p9c_A 201 GLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQ--------FPGVTHVGGDMF 254 (364)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC--------CTTEEEEECCTT
T ss_pred CCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhh--------cCCeEEEeCCcC
Confidence 346999999999999999999999999999999 888776643 147999988753
No 273
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.01 E-value=1.2e-05 Score=86.33 Aligned_cols=61 Identities=8% Similarity=-0.028 Sum_probs=46.8
Q ss_pred CCCeEEEECCcccHHH---HHHHHHh-cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 115 DKVKGFDIGTGANCIY---PLLGASL-LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~---i~La~~~-~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
+...|||+|||+|.+. +..+++. ...+|+|||.++.| ..|+++++.|+ ++++|+++++|..
T Consensus 357 ~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A-~~a~~~v~~N~-~~dkVtVI~gd~e 421 (637)
T 4gqb_A 357 NVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNA-VVTLENWQFEE-WGSQVTVVSSDMR 421 (637)
T ss_dssp CEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHH-HHHHHHHHHHT-TGGGEEEEESCTT
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHH-HHHHHHHHhcc-CCCeEEEEeCcce
Confidence 3457999999999884 3333322 12478999999854 57899999996 9999999999864
No 274
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=97.73 E-value=1.6e-05 Score=78.00 Aligned_cols=29 Identities=17% Similarity=0.040 Sum_probs=25.5
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDM 147 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDi 147 (414)
..+|||||||+|..+..++++ .+|+|+|+
T Consensus 83 g~~VLDlGcG~G~~s~~la~~---~~V~gvD~ 111 (305)
T 2p41_A 83 EGKVVDLGCGRGGWSYYCGGL---KNVREVKG 111 (305)
T ss_dssp CEEEEEETCTTSHHHHHHHTS---TTEEEEEE
T ss_pred CCEEEEEcCCCCHHHHHHHhc---CCEEEEec
Confidence 368999999999999888875 48999999
No 275
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=97.65 E-value=9.4e-05 Score=71.95 Aligned_cols=60 Identities=18% Similarity=0.144 Sum_probs=47.5
Q ss_pred CeEEEECCcc---cHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCC
Q 015035 117 VKGFDIGTGA---NCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (414)
Q Consensus 117 ~~vLDIGtGs---G~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~ 178 (414)
.++||||||. |.+..++....|+++|+++|.|+.+|+.|++.+..++ ..++.++++|..+
T Consensus 80 ~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~--~~~~~~v~aD~~~ 142 (277)
T 3giw_A 80 RQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTP--EGRTAYVEADMLD 142 (277)
T ss_dssp CEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCS--SSEEEEEECCTTC
T ss_pred CEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCC--CCcEEEEEecccC
Confidence 5899999996 4454444445689999999999999999999987553 3579999999753
No 276
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=97.65 E-value=2.5e-05 Score=79.92 Aligned_cols=52 Identities=19% Similarity=0.143 Sum_probs=40.0
Q ss_pred CCCeEEEECCc------ccHHHHHHHHH-hcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 115 DKVKGFDIGTG------ANCIYPLLGAS-LLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 115 ~~~~vLDIGtG------sG~I~i~La~~-~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
++.+||||||| +|..++.++++ +|+.+|+|+|+|+.+. .. ..+|+++++|..
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~--------~~---~~rI~fv~GDa~ 274 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH--------VD---ELRIRTIQGDQN 274 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG--------GC---BTTEEEEECCTT
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh--------hc---CCCcEEEEeccc
Confidence 45799999999 66667777765 4789999999999862 12 357999998853
No 277
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=97.63 E-value=0.00027 Score=61.93 Aligned_cols=108 Identities=7% Similarity=-0.102 Sum_probs=70.7
Q ss_pred CCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCcccc
Q 015035 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~~~p~~~~~~~~~~~~~ 194 (414)
.+.+|||||||. +++|+++.+++.|+++... +++++.+|..+.
T Consensus 12 ~g~~vL~~~~g~----------------v~vD~s~~ml~~a~~~~~~------~~~~~~~d~~~~--------------- 54 (176)
T 2ld4_A 12 AGQFVAVVWDKS----------------SPVEALKGLVDKLQALTGN------EGRVSVENIKQL--------------- 54 (176)
T ss_dssp TTSEEEEEECTT----------------SCHHHHHHHHHHHHHHTTT------TSEEEEEEGGGG---------------
T ss_pred CCCEEEEecCCc----------------eeeeCCHHHHHHHHHhccc------CcEEEEechhcC---------------
Confidence 346899999996 3499999999999987532 267777764210
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccccccccCCCccccCCCCCccc
Q 015035 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMV 274 (414)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em~ 274 (414)
+ +.+ ..+++||+|+|+=-+... ..+
T Consensus 55 -----------------------------------~-~~~--~~~~~fD~V~~~~~l~~~--------------~~~--- 79 (176)
T 2ld4_A 55 -----------------------------------L-QSA--HKESSFDIILSGLVPGST--------------TLH--- 79 (176)
T ss_dssp -----------------------------------G-GGC--CCSSCEEEEEECCSTTCC--------------CCC---
T ss_pred -----------------------------------c-ccc--CCCCCEeEEEECChhhhc--------------ccC---
Confidence 0 000 025689999997322210 011
Q ss_pred ccCChHHHHHHHHHHHHHhhccCcEEEEEeCC---------cCCHHHHHHHHHHcCC
Q 015035 275 CSGGERAFITRIIEDSVALKQTFRWYTSMVGR---------KSNLKFLISKLRKVGV 322 (414)
Q Consensus 275 ~~GGe~~Fv~rii~eS~~l~~~~~w~t~mvgk---------~~~l~~l~~~l~~~g~ 322 (414)
..+++++..++++++|++.+.... ......+.+.|++.|+
T Consensus 80 --------~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 128 (176)
T 2ld4_A 80 --------SAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGL 128 (176)
T ss_dssp --------CHHHHHHHHHHEEEEEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTTC
T ss_pred --------HHHHHHHHHHHCCCCEEEEEEcccccccccccccCCHHHHHHHHHHCCC
Confidence 145667777788888887653210 1137899999999999
No 278
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.61 E-value=4e-05 Score=68.14 Aligned_cols=37 Identities=11% Similarity=0.113 Sum_probs=31.2
Q ss_pred CCeEEEECCccc-HHHHHHHHHhcCCeeEEecCcHHHHH
Q 015035 116 KVKGFDIGTGAN-CIYPLLGASLLGWSFVGSDMTDVALE 153 (414)
Q Consensus 116 ~~~vLDIGtGsG-~I~i~La~~~~~~~vvgvDis~~Al~ 153 (414)
+.++||||||+| -++..|+.. .+..|+||||++.|++
T Consensus 36 ~~rVlEVG~G~g~~vA~~La~~-~g~~V~atDInp~Av~ 73 (153)
T 2k4m_A 36 GTRVVEVGAGRFLYVSDYIRKH-SKVDLVLTDIKPSHGG 73 (153)
T ss_dssp SSEEEEETCTTCCHHHHHHHHH-SCCEEEEECSSCSSTT
T ss_pred CCcEEEEccCCChHHHHHHHHh-CCCeEEEEECCccccc
Confidence 369999999999 599888753 6789999999998765
No 279
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=97.56 E-value=9.5e-05 Score=72.12 Aligned_cols=53 Identities=13% Similarity=-0.012 Sum_probs=46.2
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
...+||.+||.|.-+..|+.+ +.+|+|+|.|+.|++.|++ ++. +++++++++.
T Consensus 23 gg~~VD~T~G~GGHS~~il~~--~g~VigiD~Dp~Ai~~A~~-L~~-----~rv~lv~~~f 75 (285)
T 1wg8_A 23 GGVYVDATLGGAGHARGILER--GGRVIGLDQDPEAVARAKG-LHL-----PGLTVVQGNF 75 (285)
T ss_dssp TCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHH-TCC-----TTEEEEESCG
T ss_pred CCEEEEeCCCCcHHHHHHHHC--CCEEEEEeCCHHHHHHHHh-hcc-----CCEEEEECCc
Confidence 468999999999999999886 6799999999999999998 642 4799999874
No 280
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.46 E-value=0.00031 Score=67.96 Aligned_cols=45 Identities=11% Similarity=0.054 Sum_probs=39.3
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSN 162 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n 162 (414)
...|||++||||.+++.++. .+.+++|+|+++.+++.|++|++..
T Consensus 236 ~~~vlD~f~GsGt~~~~a~~--~g~~~~g~e~~~~~~~~a~~r~~~~ 280 (297)
T 2zig_A 236 GDVVLDPFAGTGTTLIAAAR--WGRRALGVELVPRYAQLAKERFARE 280 (297)
T ss_dssp TCEEEETTCTTTHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHHHH
T ss_pred CCEEEECCCCCCHHHHHHHH--cCCeEEEEeCCHHHHHHHHHHHHHh
Confidence 46899999999999877654 4679999999999999999999765
No 281
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=97.45 E-value=0.00034 Score=70.29 Aligned_cols=146 Identities=8% Similarity=0.038 Sum_probs=93.8
Q ss_pred CCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCC-----CcEEEEEccCCCCCCcccccccC
Q 015035 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHIS-----ELIEIRKVDNSESTPSIQESLTG 189 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~-----~rI~~~~~d~~~~~p~~~~~~~~ 189 (414)
.+.+|||+|+|.|.=+..|+....+..++|.|+++.-++..++|+++.+ .. .+|.+...|...
T Consensus 148 pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~-~~~~~~~~~v~v~~~D~~~----------- 215 (359)
T 4fzv_A 148 PGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYV-PEEIRDGNQVRVTSWDGRK----------- 215 (359)
T ss_dssp TTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHS-CTTTTTSSSEEEECCCGGG-----------
T ss_pred CCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhh-hhhhccCCceEEEeCchhh-----------
Confidence 3468999999999999888887666689999999999999999998874 32 346665554210
Q ss_pred CccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCccccccc-ccCCCccccCC
Q 015035 190 KSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEE-AGLNPKTSCGG 268 (414)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~~s~ee-~~~~P~~a~~g 268 (414)
+... ..++||.|++.+|=-.+.-. ...+|..-..-
T Consensus 216 ------------------------------------------~~~~--~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~ 251 (359)
T 4fzv_A 216 ------------------------------------------WGEL--EGDTYDRVLVDVPCTTDRHSLHEEENNIFKRS 251 (359)
T ss_dssp ------------------------------------------HHHH--STTCEEEEEEECCCCCHHHHTTCCTTCTTSGG
T ss_pred ------------------------------------------cchh--ccccCCEEEECCccCCCCCcccccChhhhhhC
Confidence 1111 24689999999996432101 11233322111
Q ss_pred CCCcccccCChH-HHHHHHHHHHHHhhccCcEE---EEEeCCcCCHHHHHHHHHHc
Q 015035 269 TPEEMVCSGGER-AFITRIIEDSVALKQTFRWY---TSMVGRKSNLKFLISKLRKV 320 (414)
Q Consensus 269 ~~~Em~~~GGe~-~Fv~rii~eS~~l~~~~~w~---t~mvgk~~~l~~l~~~l~~~ 320 (414)
...+. -.+ .+=.+|++.+..+++++|.+ |+-+...++-.-|...|+++
T Consensus 252 ~~~~~----~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~~ENE~vV~~~L~~~ 303 (359)
T 4fzv_A 252 RKKER----QILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHLQNEYVVQGAIELL 303 (359)
T ss_dssp GHHHH----HTHHHHHHHHHHHHHHTEEEEEEEEEEESCCCTTTTHHHHHHHHHHH
T ss_pred CHHHH----HHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCchhhCHHHHHHHHHhC
Confidence 11100 012 23457888888888888753 55566677777777777654
No 282
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=97.38 E-value=0.00011 Score=79.64 Aligned_cols=60 Identities=13% Similarity=-0.034 Sum_probs=44.7
Q ss_pred CCeEEEECCcccHHHHH--HHHH--h---------cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 116 KVKGFDIGTGANCIYPL--LGAS--L---------LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~--La~~--~---------~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
...|||||||+|.+... -|.+ . ...+|+|||.++.|+..++.... |+ ++++|+++++|..
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng-~~d~VtVI~gd~e 482 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RT-WKRRVTIIESDMR 482 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HT-TTTCSEEEESCGG
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cC-CCCeEEEEeCchh
Confidence 35799999999999632 2221 1 23499999999998876666554 75 9999999999853
No 283
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=97.26 E-value=0.0015 Score=60.54 Aligned_cols=57 Identities=14% Similarity=0.135 Sum_probs=47.2
Q ss_pred CeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCC--CCcEEEEEccCC
Q 015035 117 VKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHI--SELIEIRKVDNS 177 (414)
Q Consensus 117 ~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l--~~rI~~~~~d~~ 177 (414)
.+||++|||.+.+. +|. .++.+|+.+|.|++..+.|++|++.++ + .++|+++.+|..
T Consensus 32 ~~VLEiGtGySTl~--lA~-~~~g~VvtvE~d~~~~~~ar~~l~~~g-~~~~~~I~~~~gda~ 90 (202)
T 3cvo_A 32 EVILEYGSGGSTVV--AAE-LPGKHVTSVESDRAWARMMKAWLAANP-PAEGTEVNIVWTDIG 90 (202)
T ss_dssp SEEEEESCSHHHHH--HHT-STTCEEEEEESCHHHHHHHHHHHHHSC-CCTTCEEEEEECCCS
T ss_pred CEEEEECchHHHHH--HHH-cCCCEEEEEeCCHHHHHHHHHHHHHcC-CCCCCceEEEEeCch
Confidence 58999999854433 444 347899999999999999999999996 7 789999998853
No 284
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=97.15 E-value=0.0096 Score=58.23 Aligned_cols=63 Identities=10% Similarity=0.048 Sum_probs=49.8
Q ss_pred CCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHH-CC-CC-CCcEEEEEccCC
Q 015035 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKS-NP-HI-SELIEIRKVDNS 177 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~-n~-~l-~~rI~~~~~d~~ 177 (414)
++.+||=||-|.|.++-.+++..+..+|+.+|||++.+++|++-... +. .+ ..|++++..|..
T Consensus 83 ~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~ 148 (294)
T 3o4f_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGV 148 (294)
T ss_dssp CCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTT
T ss_pred CCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHH
Confidence 45799999999999988887755567999999999999999987532 11 12 358999998854
No 285
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=97.11 E-value=0.00055 Score=66.69 Aligned_cols=54 Identities=6% Similarity=-0.081 Sum_probs=45.4
Q ss_pred CeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 117 VKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 117 ~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
..+||+=+|||.|++.+.. .+-+++.+|.++.+++.-++|++. .+++++++.|.
T Consensus 93 ~~~LDlfaGSGaLgiEaLS--~~d~~vfvE~~~~a~~~L~~Nl~~----~~~~~V~~~D~ 146 (283)
T 2oo3_A 93 NSTLSYYPGSPYFAINQLR--SQDRLYLCELHPTEYNFLLKLPHF----NKKVYVNHTDG 146 (283)
T ss_dssp SSSCCEEECHHHHHHHHSC--TTSEEEEECCSHHHHHHHTTSCCT----TSCEEEECSCH
T ss_pred CCceeEeCCcHHHHHHHcC--CCCeEEEEeCCHHHHHHHHHHhCc----CCcEEEEeCcH
Confidence 4689999999999988765 447999999999999999999864 25788888773
No 286
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=96.74 E-value=0.003 Score=59.88 Aligned_cols=47 Identities=19% Similarity=0.157 Sum_probs=38.9
Q ss_pred CCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCC
Q 015035 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNP 163 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~ 163 (414)
....|||..||||..++.... .+.+++|+|+++.+++.|++|++.++
T Consensus 212 ~~~~vlD~f~GsGtt~~~a~~--~gr~~ig~e~~~~~~~~~~~r~~~~~ 258 (260)
T 1g60_A 212 PNDLVLDCFMGSGTTAIVAKK--LGRNFIGCDMNAEYVNQANFVLNQLE 258 (260)
T ss_dssp TTCEEEESSCTTCHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHHC--
T ss_pred CCCEEEECCCCCCHHHHHHHH--cCCeEEEEeCCHHHHHHHHHHHHhcc
Confidence 346899999999998876543 46799999999999999999998774
No 287
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=96.68 E-value=0.0016 Score=62.93 Aligned_cols=81 Identities=14% Similarity=0.143 Sum_probs=49.6
Q ss_pred CCcEEEEEECCCcccccccccCCCccccCCCCCcccccCChHHHHHHHHHHHHHhhccCcEEEEEeCCcC----------
Q 015035 239 GEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKS---------- 308 (414)
Q Consensus 239 ~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em~~~GGe~~Fv~rii~eS~~l~~~~~w~t~mvgk~~---------- 308 (414)
+++||+|+|||||+...+.... +.. .++ +..-...+.++..+++++..+++++|++.+++|...
T Consensus 38 ~~s~DlIvtdPPY~~~~~y~~~-~~~--~~~---~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~d~~~~~~~~g~~~ 111 (297)
T 2zig_A 38 EASVHLVVTSPPYWTLKRYEDT-PGQ--LGH---IEDYEAFLDELDRVWREVFRLLVPGGRLVIVVGDVAVARRRFGRHL 111 (297)
T ss_dssp TTCEEEEEECCCCCCCC--------C--CHH---HHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCEEEECC----EE
T ss_pred CCceeEEEECCCCCCccccCCC-hhh--hcc---cccHHHHHHHHHHHHHHHHHHcCCCcEEEEEECCCccccccCCccc
Confidence 5789999999999864321110 000 000 000000234567888999999999999988888321
Q ss_pred ---CHHHHHHHHHHcCCceE
Q 015035 309 ---NLKFLISKLRKVGVTIV 325 (414)
Q Consensus 309 ---~l~~l~~~l~~~g~~~v 325 (414)
....+...+++.|+...
T Consensus 112 ~~~~~~~l~~~~~~~Gf~~~ 131 (297)
T 2zig_A 112 VFPLHADIQVRCRKLGFDNL 131 (297)
T ss_dssp EECHHHHHHHHHHHTTCEEE
T ss_pred ccccHHHHHHHHHHcCCeee
Confidence 12467888999998543
No 288
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=96.52 E-value=0.0077 Score=57.50 Aligned_cols=47 Identities=17% Similarity=0.153 Sum_probs=34.6
Q ss_pred CCCeEEEECCcccHHHHHHHHH-------hcC-----CeeEEecCcH---HHH-----------HHHHHHHHH
Q 015035 115 DKVKGFDIGTGANCIYPLLGAS-------LLG-----WSFVGSDMTD---VAL-----------EWAEKNVKS 161 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~-------~~~-----~~vvgvDis~---~Al-----------~~A~~N~~~ 161 (414)
...+|||||+|+|.-.+.++.. .|+ .+++++|..| +.+ ++|+++++.
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~ 132 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQ 132 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHT
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHh
Confidence 3468999999999987776554 342 5899999887 333 367777765
No 289
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=96.28 E-value=0.0065 Score=60.84 Aligned_cols=57 Identities=11% Similarity=0.102 Sum_probs=47.5
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
...|||||.|.|++...|+.+....+++++|+|+..+...++.. .. ++++++++|..
T Consensus 59 ~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~-~~----~~l~ii~~D~l 115 (353)
T 1i4w_A 59 ELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF-EG----SPLQILKRDPY 115 (353)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-TT----SSCEEECSCTT
T ss_pred CCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-cC----CCEEEEECCcc
Confidence 46899999999999999987655568999999999998888776 22 47899999864
No 290
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=96.22 E-value=0.0051 Score=59.76 Aligned_cols=61 Identities=13% Similarity=-0.016 Sum_probs=48.5
Q ss_pred CCCeEEEECCcccHHHHHHHHHh-----cCCeeEEecCcH--------------------------HHHHHHHHHHHHCC
Q 015035 115 DKVKGFDIGTGANCIYPLLGASL-----LGWSFVGSDMTD--------------------------VALEWAEKNVKSNP 163 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~-----~~~~vvgvDis~--------------------------~Al~~A~~N~~~n~ 163 (414)
.+..||++||..|.-++.++... ++.+|+++|..+ ..++.|++|+++.+
T Consensus 106 ~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~g 185 (282)
T 2wk1_A 106 VPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYD 185 (282)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTT
T ss_pred CCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcC
Confidence 45799999999998777777654 367899999631 14788999999996
Q ss_pred CC-CCcEEEEEccC
Q 015035 164 HI-SELIEIRKVDN 176 (414)
Q Consensus 164 ~l-~~rI~~~~~d~ 176 (414)
+ .++|+++.++.
T Consensus 186 -l~~~~I~li~Gda 198 (282)
T 2wk1_A 186 -LLDEQVRFLPGWF 198 (282)
T ss_dssp -CCSTTEEEEESCH
T ss_pred -CCcCceEEEEeCH
Confidence 7 48999999874
No 291
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=96.22 E-value=0.013 Score=59.39 Aligned_cols=136 Identities=14% Similarity=0.164 Sum_probs=84.8
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHC-C-CC----CCcEEEEEccCCCCCCcccccccC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSN-P-HI----SELIEIRKVDNSESTPSIQESLTG 189 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n-~-~l----~~rI~~~~~d~~~~~p~~~~~~~~ 189 (414)
+.+||=||-|.|.++-.+.+ .+..+++.||||++.+++|++-.... + .+ .++++++..|...
T Consensus 206 pkrVLIIGgGdG~~~revlk-h~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~----------- 273 (381)
T 3c6k_A 206 GKDVLILGGGDGGILCEIVK-LKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIP----------- 273 (381)
T ss_dssp TCEEEEEECTTCHHHHHHHT-TCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHH-----------
T ss_pred CCeEEEECCCcHHHHHHHHh-cCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHH-----------
Confidence 46999999999999888776 45579999999999999999864211 0 01 2467888776321
Q ss_pred CccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccccccccCCCccccCCC
Q 015035 190 KSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGT 269 (414)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~ 269 (414)
++....+..++||+||...+=... ...| . +
T Consensus 274 -----------------------------------------fl~~~~~~~~~yDvIIvDl~D~~~----s~~p----~-g 303 (381)
T 3c6k_A 274 -----------------------------------------VLKRYAKEGREFDYVINDLTAVPI----STSP----E-E 303 (381)
T ss_dssp -----------------------------------------HHHHHHHHTCCEEEEEEECCSSCC----CCC--------
T ss_pred -----------------------------------------HHHhhhhccCceeEEEECCCCCcc----cCcc----c-C
Confidence 122111234689999987531110 0001 0 1
Q ss_pred CCcccccCChHHHHHHHHHHHHHhhccCcEEEEEeCCcCC---HHHHHHHHHHc
Q 015035 270 PEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSN---LKFLISKLRKV 320 (414)
Q Consensus 270 ~~Em~~~GGe~~Fv~rii~eS~~l~~~~~w~t~mvgk~~~---l~~l~~~l~~~ 320 (414)
.. ...|.+.+.+...+.|+++|.+.+--+-... +..+.+.|++.
T Consensus 304 ~a-------~~Lft~eFy~~~~~~L~p~GVlv~Q~~s~~~~~~~~~i~~tl~~v 350 (381)
T 3c6k_A 304 DS-------TWEFLRLILDLSMKVLKQDGKYFTQGNCVNLTEALSLYEEQLGRL 350 (381)
T ss_dssp -C-------HHHHHHHHHHHHHHTEEEEEEEEEEEEETTCHHHHHHHHHHHTTS
T ss_pred cc-------hHHHHHHHHHHHHHhcCCCCEEEEecCCCcchhHHHHHHHHHHHh
Confidence 11 4567777888888889999998765443322 34445555554
No 292
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=95.53 E-value=0.0066 Score=60.15 Aligned_cols=44 Identities=18% Similarity=0.148 Sum_probs=36.0
Q ss_pred CeEEEECCcccHHHHHHHHHhcCC-eeEEecCcHHHHHHHHHHHH
Q 015035 117 VKGFDIGTGANCIYPLLGASLLGW-SFVGSDMTDVALEWAEKNVK 160 (414)
Q Consensus 117 ~~vLDIGtGsG~I~i~La~~~~~~-~vvgvDis~~Al~~A~~N~~ 160 (414)
.++||+.||+|.+.+.+......+ .+.++|+++.|++..+.|..
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~ 47 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFP 47 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhcc
Confidence 589999999999987776543212 58999999999999999964
No 293
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=95.14 E-value=0.024 Score=56.58 Aligned_cols=55 Identities=15% Similarity=-0.048 Sum_probs=45.9
Q ss_pred CCeEEEECCcccHHHHHHHHHh-cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL-LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~-~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
...++|..+|.|.-+..|+.+. ++.+|+|+|+|+.|++.|+ ++ ..+++++++++.
T Consensus 58 ggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL-----~~~Rv~lv~~nF 113 (347)
T 3tka_A 58 DGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI-----DDPRFSIIHGPF 113 (347)
T ss_dssp TCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC-----CCTTEEEEESCG
T ss_pred CCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh-----cCCcEEEEeCCH
Confidence 4689999999999999888875 6679999999999999984 32 236899998864
No 294
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=95.07 E-value=0.05 Score=55.06 Aligned_cols=62 Identities=11% Similarity=0.025 Sum_probs=50.3
Q ss_pred CCCeEEEECCcccHHHHHHH-HHhcC-CeeEEecCcHHHHHHHHHHHHH--CCCCCCcEEEEEccC
Q 015035 115 DKVKGFDIGTGANCIYPLLG-ASLLG-WSFVGSDMTDVALEWAEKNVKS--NPHISELIEIRKVDN 176 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La-~~~~~-~~vvgvDis~~Al~~A~~N~~~--n~~l~~rI~~~~~d~ 176 (414)
+...++|+|++.|..++.++ +..+. .+|+++|.+|.+++..++|++. |+.+..+|++++...
T Consensus 226 ~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~al 291 (409)
T 2py6_A 226 DSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCGA 291 (409)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSEE
T ss_pred CCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEeEE
Confidence 45689999999999998877 44444 6999999999999999999998 542336898887654
No 295
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=94.76 E-value=0.046 Score=53.84 Aligned_cols=43 Identities=19% Similarity=0.108 Sum_probs=35.4
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCe-eEEecCcHHHHHHHHHHHH
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWS-FVGSDMTDVALEWAEKNVK 160 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~-vvgvDis~~Al~~A~~N~~ 160 (414)
..+++|+.||+|.+.+.+.. .+++ +.++|+|+.|++..+.|..
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~--aG~~~v~~~e~d~~a~~t~~~N~~ 54 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALES--CGAECVYSNEWDKYAQEVYEMNFG 54 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHH--TTCEEEEEECCCHHHHHHHHHHHS
T ss_pred CCcEEEECCCcCHHHHHHHH--CCCeEEEEEeCCHHHHHHHHHHcC
Confidence 47899999999988766654 4554 6789999999999999974
No 296
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=94.30 E-value=0.047 Score=54.87 Aligned_cols=41 Identities=12% Similarity=0.141 Sum_probs=33.9
Q ss_pred CeEEEECCcccHHHHHHHHHhcCCe-eEEecCcHHHHHHHHHHH
Q 015035 117 VKGFDIGTGANCIYPLLGASLLGWS-FVGSDMTDVALEWAEKNV 159 (414)
Q Consensus 117 ~~vLDIGtGsG~I~i~La~~~~~~~-vvgvDis~~Al~~A~~N~ 159 (414)
.+++|+.||+|.+.+-+.. .+++ +.|+|+++.|++..+.|.
T Consensus 3 ~~vidLFsG~GGlslG~~~--aG~~~v~avE~d~~a~~t~~~N~ 44 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAAR--AGFDVKMAVEIDQHAINTHAINF 44 (376)
T ss_dssp CEEEEETCTTSHHHHHHHH--HTCEEEEEECSCHHHHHHHHHHC
T ss_pred CeEEEEccCcCHHHHHHHH--CCCcEEEEEeCCHHHHHHHHHhC
Confidence 5899999999988876654 3565 569999999999998885
No 297
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=92.96 E-value=0.17 Score=50.96 Aligned_cols=52 Identities=12% Similarity=0.038 Sum_probs=36.7
Q ss_pred CCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
.+.++|||||..|.-.-.|+.+ +.+|+|||+.+-. ..+..+ .+|++++.|..
T Consensus 211 ~G~~vlDLGAaPGGWT~~l~~r--g~~V~aVD~~~l~-----~~l~~~----~~V~~~~~d~~ 262 (375)
T 4auk_A 211 NGMWAVDLGACPGGWTYQLVKR--NMWVYSVDNGPMA-----QSLMDT----GQVTWLREDGF 262 (375)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT--TCEEEEECSSCCC-----HHHHTT----TCEEEECSCTT
T ss_pred CCCEEEEeCcCCCHHHHHHHHC--CCEEEEEEhhhcC-----hhhccC----CCeEEEeCccc
Confidence 3579999999999988777654 6799999986422 122223 36888877643
No 298
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=92.05 E-value=0.26 Score=48.10 Aligned_cols=74 Identities=15% Similarity=0.201 Sum_probs=49.8
Q ss_pred CCcEEEEEECCCcccccccccCCCccccCCCCCcccccCChHHHHHHHHHHHHHhhccCcEEEEEeCCc--C--------
Q 015035 239 GEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRK--S-------- 308 (414)
Q Consensus 239 ~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em~~~GGe~~Fv~rii~eS~~l~~~~~w~t~mvgk~--~-------- 308 (414)
+++||+|+++|||...... .+. ... ...-+.++..+++++..+++++|.+.+.++.. .
T Consensus 31 ~~svDlI~tDPPY~~~~~~-~y~-------~~~----~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d~~~~g~~~~~~~ 98 (323)
T 1boo_A 31 EESISLVMTSPPFALQRKK-EYG-------NLE----QHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGAYMKGVPARSIY 98 (323)
T ss_dssp SSCEEEEEECCCCSSSCSC-SSC-------SCH----HHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCEETTEEEECCH
T ss_pred CCCeeEEEECCCCCCCccc-ccC-------CcC----HHHHHHHHHHHHHHHHHHCcCCcEEEEEECCEecCCCcccccc
Confidence 5689999999999764321 110 000 00124577888888889999999988888854 1
Q ss_pred CHHHHHHHHHHcCCce
Q 015035 309 NLKFLISKLRKVGVTI 324 (414)
Q Consensus 309 ~l~~l~~~l~~~g~~~ 324 (414)
.+..+...+++.|+..
T Consensus 99 ~~~~i~~~~~~~Gf~~ 114 (323)
T 1boo_A 99 NFRVLIRMIDEVGFFL 114 (323)
T ss_dssp HHHHHHHHHHTTCCEE
T ss_pred hHHHHHHHHHhCCCEE
Confidence 2566777788889753
No 299
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=90.22 E-value=0.37 Score=46.96 Aligned_cols=47 Identities=13% Similarity=-0.025 Sum_probs=38.9
Q ss_pred CCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCC
Q 015035 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNP 163 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~ 163 (414)
.+..|||.-||||..+.+.. ..+-+++|+|+++.+++.|+++++..+
T Consensus 252 ~~~~VlDpF~GsGtt~~aa~--~~gr~~ig~e~~~~~~~~~~~r~~~~~ 298 (323)
T 1boo_A 252 PDDLVVDIFGGSNTTGLVAE--RESRKWISFEMKPEYVAASAFRFLDNN 298 (323)
T ss_dssp TTCEEEETTCTTCHHHHHHH--HTTCEEEEEESCHHHHHHHHGGGSCSC
T ss_pred CCCEEEECCCCCCHHHHHHH--HcCCCEEEEeCCHHHHHHHHHHHHhcc
Confidence 34689999999998875543 347799999999999999999987653
No 300
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=90.16 E-value=0.34 Score=47.66 Aligned_cols=45 Identities=16% Similarity=0.166 Sum_probs=35.1
Q ss_pred CCCeEEEECCcccHHHHHHHHHhcCCee--EEecCcHHHHHHHHHHH
Q 015035 115 DKVKGFDIGTGANCIYPLLGASLLGWSF--VGSDMTDVALEWAEKNV 159 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~~~~~v--vgvDis~~Al~~A~~N~ 159 (414)
++.+++|+.||.|.+...+.....++++ .|+|+|+.|.+.-+.|.
T Consensus 9 ~~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~ 55 (327)
T 3qv2_A 9 KQVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNF 55 (327)
T ss_dssp CCEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHH
T ss_pred CCCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHC
Confidence 4568999999999888666543222454 59999999999999986
No 301
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=89.36 E-value=0.76 Score=43.07 Aligned_cols=72 Identities=17% Similarity=0.156 Sum_probs=47.7
Q ss_pred CCcEEEEEECCCcccccccccCCCccccCCCCCcccccCChHHHHHHHHHHHHHhhccCcEEEEEeCCcCCHHHHHHHHH
Q 015035 239 GEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLR 318 (414)
Q Consensus 239 ~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em~~~GGe~~Fv~rii~eS~~l~~~~~w~t~mvgk~~~l~~l~~~l~ 318 (414)
+++||+|++.|||......-. .+. +.+ .=+.|+..++++...+++++|.+.++++ ......+...+.
T Consensus 21 ~~~vdlI~~DPPY~~~~~~~d-----~~~-~~~------~y~~~~~~~l~~~~~~Lk~~g~i~v~~~-d~~~~~~~~~~~ 87 (260)
T 1g60_A 21 NKSVQLAVIDPPYNLSKADWD-----SFD-SHN------EFLAFTYRWIDKVLDKLDKDGSLYIFNT-PFNCAFICQYLV 87 (260)
T ss_dssp TTCEEEEEECCCCSSCSSGGG-----CCS-SHH------HHHHHHHHHHHHHHHHEEEEEEEEEEEC-HHHHHHHHHHHH
T ss_pred ccccCEEEECCCCCCCccccc-----ccC-CHH------HHHHHHHHHHHHHHHHhcCCeEEEEEcC-cHHHHHHHHHHH
Confidence 468999999999975411100 000 111 0245788888888889999998877775 444556677788
Q ss_pred HcCCc
Q 015035 319 KVGVT 323 (414)
Q Consensus 319 ~~g~~ 323 (414)
+.|+.
T Consensus 88 ~~gf~ 92 (260)
T 1g60_A 88 SKGMI 92 (260)
T ss_dssp HTTCE
T ss_pred hhccc
Confidence 88874
No 302
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=88.66 E-value=1.2 Score=45.02 Aligned_cols=21 Identities=14% Similarity=-0.168 Sum_probs=17.5
Q ss_pred CCeEEEECCcccHHHHHHHHH
Q 015035 116 KVKGFDIGTGANCIYPLLGAS 136 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~ 136 (414)
..+|+|+||++|-..+.+...
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ 73 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRD 73 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHH
T ss_pred ceEEEecCCCCCchHHHHHHH
Confidence 578999999999888776654
No 303
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=88.07 E-value=0.65 Score=45.04 Aligned_cols=45 Identities=7% Similarity=0.070 Sum_probs=34.6
Q ss_pred CCCeEEEECCcccHHHHHHHHHhcCCe-eEEecCcHHHHHHHHHHH
Q 015035 115 DKVKGFDIGTGANCIYPLLGASLLGWS-FVGSDMTDVALEWAEKNV 159 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~~~~~-vvgvDis~~Al~~A~~N~ 159 (414)
...+++|+.||.|.+.+.+........ +.++|+|+.|.+.-+.|.
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~ 60 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRH 60 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHT
T ss_pred CCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhC
Confidence 457999999999988866654333333 589999999998888774
No 304
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=88.05 E-value=0.7 Score=45.15 Aligned_cols=47 Identities=9% Similarity=-0.021 Sum_probs=36.4
Q ss_pred CCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcH---HHHHHHHHHHHHCC
Q 015035 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTD---VALEWAEKNVKSNP 163 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~---~Al~~A~~N~~~n~ 163 (414)
....|||.-||||..+.+... .+-+++|+|+++ ..++.|+++++..+
T Consensus 242 ~~~~vlDpF~GsGtt~~aa~~--~~r~~ig~e~~~~~~~~~~~~~~Rl~~~~ 291 (319)
T 1eg2_A 242 PGSTVLDFFAGSGVTARVAIQ--EGRNSICTDAAPVFKEYYQKQLTFLQDDG 291 (319)
T ss_dssp TTCEEEETTCTTCHHHHHHHH--HTCEEEEEESSTHHHHHHHHHHHHC----
T ss_pred CCCEEEecCCCCCHHHHHHHH--cCCcEEEEECCccHHHHHHHHHHHHHHcc
Confidence 346899999999988765443 467999999999 99999999987664
No 305
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=85.36 E-value=0.94 Score=44.59 Aligned_cols=45 Identities=18% Similarity=0.069 Sum_probs=34.8
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCe-eEEecCcHHHHHHHHHHHH
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWS-FVGSDMTDVALEWAEKNVK 160 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~-vvgvDis~~Al~~A~~N~~ 160 (414)
+.+++|+.||.|.+...+.....+++ +.|+|+|+.|.+.-+.|..
T Consensus 3 ~~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~ 48 (333)
T 4h0n_A 3 SHKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFP 48 (333)
T ss_dssp CEEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT
T ss_pred CCEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCC
Confidence 35899999999988876654332234 6799999999999888863
No 306
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=82.71 E-value=9.5 Score=37.56 Aligned_cols=64 Identities=9% Similarity=-0.131 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHhhccCcEEEEEeCCcCCHHHHHHHHHHcCCceEEEEEecCCCe---eEEEEEEEeccc
Q 015035 281 AFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQT---CRWGLAWSFVPP 347 (414)
Q Consensus 281 ~Fv~rii~eS~~l~~~~~w~t~mvgk~~~l~~l~~~l~~~g~~~v~~~e~~qG~t---~Rw~lAWsf~~~ 347 (414)
.+.+..++-+...+.++|-|.+=|=.-+.-+.+ ..+++ .|..|++.+. ..+. .-++++--|...
T Consensus 194 ~L~ElALdfA~~~LkpGGsFvVKVFQGsg~~~L-~~lrk-~F~~VK~fK~-ASRa~SsEvYLVG~gfKg~ 260 (344)
T 3r24_A 194 GFFTYLCGFIKQKLALGGSIAVKITEHSWNADL-YKLMG-HFSWWTAFVT-NVNASSSEAFLIGANYLGK 260 (344)
T ss_dssp THHHHHHHHHHHHEEEEEEEEEEECSSSCCHHH-HHHHT-TEEEEEEEEE-GGGTTSSCEEEEEEEECSS
T ss_pred HHHHHHHHHHHHhCcCCCEEEEEEecCCCHHHH-HHHHh-hCCeEEEECC-CCCCCCeeEEEEeeeccCC
Confidence 466677777788888888776544322332344 44554 6887887763 3332 346777777654
No 307
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=80.50 E-value=8 Score=37.55 Aligned_cols=70 Identities=14% Similarity=0.262 Sum_probs=48.7
Q ss_pred CCcEEEEEECCCcccccccccCCCccccCCCCCcccccCChHHHHHHHHHHHHHhhccCcEEEEEeCCc-------CCHH
Q 015035 239 GEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRK-------SNLK 311 (414)
Q Consensus 239 ~~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em~~~GGe~~Fv~rii~eS~~l~~~~~w~t~mvgk~-------~~l~ 311 (414)
+++||+|++-|||....+.- . ..+ .-+.++...+.+...+++++|.+.++++.. .++.
T Consensus 56 ~~svDlI~tDPPY~~~~d~~--------~-~~~------~~~~~~~~~l~~~~rvLk~~G~i~i~~~~~~~~~~~~~~l~ 120 (319)
T 1eg2_A 56 DDSVQLIICDPPYNIMLADW--------D-DHM------DYIGWAKRWLAEAERVLSPTGSIAIFGGLQYQGEAGSGDLI 120 (319)
T ss_dssp TTCEEEEEECCCSBCCGGGG--------G-TCS------SHHHHHHHHHHHHHHHEEEEEEEEEEECSCCCCCTTBCCHH
T ss_pred cCCcCEEEECCCCCCCCCCc--------c-CHH------HHHHHHHHHHHHHHHHcCCCeEEEEEcCcccccccccccHH
Confidence 56899999999997541110 0 011 135678888888888999999988888854 2347
Q ss_pred HHHHHHHHcC-Cc
Q 015035 312 FLISKLRKVG-VT 323 (414)
Q Consensus 312 ~l~~~l~~~g-~~ 323 (414)
.+...+...| +.
T Consensus 121 ~l~~~i~~~G~~~ 133 (319)
T 1eg2_A 121 SIISHMRQNSKML 133 (319)
T ss_dssp HHHHHHHHHCCCE
T ss_pred HHHHHHhCcccce
Confidence 7777777776 54
No 308
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=78.02 E-value=2.6 Score=40.42 Aligned_cols=60 Identities=13% Similarity=0.071 Sum_probs=45.2
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
..++|=.|+++| |+..++..+ .+++|++++.+++.++.+.+.+...+ ...++.++..|..
T Consensus 8 ~k~vlVTGas~g-IG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~Dl~ 69 (319)
T 3ioy_A 8 GRTAFVTGGANG-VGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEG-SGPEVMGVQLDVA 69 (319)
T ss_dssp TCEEEEETTTST-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT-CGGGEEEEECCTT
T ss_pred CCEEEEcCCchH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-CCCeEEEEECCCC
Confidence 357888887655 777777654 47899999999999888777776553 3447889988864
No 309
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=77.48 E-value=1.2 Score=43.06 Aligned_cols=35 Identities=9% Similarity=-0.131 Sum_probs=27.2
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHH
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDV 150 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~ 150 (414)
..+|||||||.|.-.-.++.+.+...++|+|+...
T Consensus 91 ~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d 125 (282)
T 3gcz_A 91 TGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQ 125 (282)
T ss_dssp CEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCT
T ss_pred CCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccC
Confidence 35899999999998876665555557889999754
No 310
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=76.73 E-value=1.3 Score=42.72 Aligned_cols=33 Identities=15% Similarity=0.059 Sum_probs=24.6
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCc
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMT 148 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis 148 (414)
..+|||||||.|.-.-.++.+.+...++|+|+.
T Consensus 75 ~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVG 107 (277)
T 3evf_A 75 EGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLG 107 (277)
T ss_dssp CEEEEEETCTTCHHHHHHHTSTTEEEEEEECCC
T ss_pred CCEEEEecCCCCHHHHHHHHhcCCCcceeEEEe
Confidence 358999999999988766654444467777776
No 311
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=75.76 E-value=11 Score=36.09 Aligned_cols=74 Identities=12% Similarity=0.093 Sum_probs=46.2
Q ss_pred EEEecCCCeeCCCCCcHhHHHHH---------HHHHccCCCCCCCCCCCCCeEEEECCcc-cHHHHHHHHHhcCCeeEEe
Q 015035 76 NWWIPDGQLCPTVPNRSNYIHWI---------EDLLSSNIIPTTSRNGDKVKGFDIGTGA-NCIYPLLGASLLGWSFVGS 145 (414)
Q Consensus 76 ~~~vp~gvLiPriP~R~~yi~~i---------~dll~~~~~~~~~~~~~~~~vLDIGtGs-G~I~i~La~~~~~~~vvgv 145 (414)
-+.+|+..++|- |..+.+.+.. ...+....+ ....+||-+|+|. |.+++.+++. .+++|+++
T Consensus 125 y~~v~~~~~~~i-P~~~~~~~aa~l~~~~~ta~~~l~~~~~------~~g~~VlV~GaG~vG~~a~qla~~-~Ga~Vi~~ 196 (340)
T 3s2e_A 125 YVVADPNYVGLL-PDKVGFVEIAPILCAGVTVYKGLKVTDT------RPGQWVVISGIGGLGHVAVQYARA-MGLRVAAV 196 (340)
T ss_dssp EEEECTTTSEEC-CTTSCHHHHGGGGTHHHHHHHHHHTTTC------CTTSEEEEECCSTTHHHHHHHHHH-TTCEEEEE
T ss_pred EEEechHHEEEC-CCCCCHHHhhcccchhHHHHHHHHHcCC------CCCCEEEEECCCHHHHHHHHHHHH-CCCeEEEE
Confidence 367888887775 4444443321 111221111 2345788899875 6666666664 57799999
Q ss_pred cCcHHHHHHHHH
Q 015035 146 DMTDVALEWAEK 157 (414)
Q Consensus 146 Dis~~Al~~A~~ 157 (414)
|.+++.++.|++
T Consensus 197 ~~~~~~~~~~~~ 208 (340)
T 3s2e_A 197 DIDDAKLNLARR 208 (340)
T ss_dssp ESCHHHHHHHHH
T ss_pred eCCHHHHHHHHH
Confidence 999999888754
No 312
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=75.17 E-value=2.3 Score=39.15 Aligned_cols=58 Identities=16% Similarity=0.154 Sum_probs=44.3
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
..++|=.|.++| |+..++..+ .+++|+++|.+++.++.+.+.++..+ .++.++..|..
T Consensus 7 ~k~vlVTGas~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~ 66 (252)
T 3h7a_A 7 NATVAVIGAGDY-IGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAG---GRIVARSLDAR 66 (252)
T ss_dssp SCEEEEECCSSH-HHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT---CEEEEEECCTT
T ss_pred CCEEEEECCCch-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CeEEEEECcCC
Confidence 356888887765 777776654 47899999999998888877777653 47888888864
No 313
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=74.19 E-value=2.3 Score=40.74 Aligned_cols=40 Identities=13% Similarity=0.080 Sum_probs=31.6
Q ss_pred eEEEECCcccHHHHHHHHHhcCCe-eEEecCcHHHHHHHHHHH
Q 015035 118 KGFDIGTGANCIYPLLGASLLGWS-FVGSDMTDVALEWAEKNV 159 (414)
Q Consensus 118 ~vLDIGtGsG~I~i~La~~~~~~~-vvgvDis~~Al~~A~~N~ 159 (414)
++|||-||.|.+.+.+- ..+++ +.|+|+|+.|.+.-+.|.
T Consensus 2 kvidLFsG~GG~~~G~~--~aG~~~v~a~e~d~~a~~ty~~N~ 42 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQ--KAGFRIICANEYDKSIWKTYESNH 42 (331)
T ss_dssp EEEEESCTTCHHHHHHH--HTTCEEEEEEECCTTTHHHHHHHC
T ss_pred eEEEeCcCccHHHHHHH--HCCCEEEEEEeCCHHHHHHHHHHC
Confidence 79999999998775543 34665 459999999998888774
No 314
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=74.15 E-value=2.3 Score=40.12 Aligned_cols=58 Identities=10% Similarity=0.009 Sum_probs=42.7
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
...+|=-|.++| |+..++.++ .+++|+.+|++++.++.+.+.+...+ .++..+..|..
T Consensus 9 gKvalVTGas~G-IG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g---~~~~~~~~Dv~ 68 (255)
T 4g81_D 9 GKTALVTGSARG-LGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKG---YDAHGVAFDVT 68 (255)
T ss_dssp TCEEEETTCSSH-HHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTT---CCEEECCCCTT
T ss_pred CCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEEeeCC
Confidence 346666676655 777777654 57999999999999988877777664 46777777764
No 315
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=73.25 E-value=4.1 Score=42.14 Aligned_cols=44 Identities=16% Similarity=0.044 Sum_probs=35.0
Q ss_pred CCCeEEEECCcccHHHHHHHHHhcCCe-eEEecCcHHHHHHHHHHHH
Q 015035 115 DKVKGFDIGTGANCIYPLLGASLLGWS-FVGSDMTDVALEWAEKNVK 160 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~~~~~-vvgvDis~~Al~~A~~N~~ 160 (414)
...+++|+.||.|.+.+.+. ..+++ +.++|+|+.|.+.-+.|..
T Consensus 87 ~~~~viDLFaG~GGlslG~~--~aG~~~v~avE~d~~A~~ty~~N~~ 131 (482)
T 3me5_A 87 YAFRFIDLFAGIGGIRRGFE--SIGGQCVFTSEWNKHAVRTYKANHY 131 (482)
T ss_dssp CSEEEEEESCTTSHHHHHHH--TTTEEEEEEECCCHHHHHHHHHHSC
T ss_pred ccceEEEecCCccHHHHHHH--HCCCEEEEEEeCCHHHHHHHHHhcc
Confidence 45799999999998876554 34554 7899999999998888863
No 316
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=71.16 E-value=6.5 Score=37.02 Aligned_cols=59 Identities=12% Similarity=0.032 Sum_probs=42.1
Q ss_pred CeEEEECCcccHHHHHHHHHh--cCC---eeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 117 VKGFDIGTGANCIYPLLGASL--LGW---SFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 117 ~~vLDIGtGsG~I~i~La~~~--~~~---~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
.++|=.|.++| |+..++.++ .++ +|+.++.+++.++.+.+.+.... -..++.++..|..
T Consensus 34 k~~lVTGas~G-IG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~Dv~ 97 (287)
T 3rku_A 34 KTVLITGASAG-IGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEF-PNAKVHVAQLDIT 97 (287)
T ss_dssp CEEEEESTTSH-HHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHC-TTCEEEEEECCTT
T ss_pred CEEEEecCCCh-HHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhC-CCCeEEEEECCCC
Confidence 57888886654 777776654 234 99999999999887777665531 2356888888865
No 317
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=70.47 E-value=7.2 Score=38.99 Aligned_cols=48 Identities=8% Similarity=-0.054 Sum_probs=31.6
Q ss_pred CCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
...+|+|+|||+|-.++.+... .++..++.....+.-...+++...|.
T Consensus 52 ~~~~IaDlGCssG~Nt~~~v~~--------------ii~~i~~~~~~~~~~~pe~~v~~nDL 99 (374)
T 3b5i_A 52 PPFTAVDLGCSSGANTVHIIDF--------------IVKHISKRFDAAGIDPPEFTAFFSDL 99 (374)
T ss_dssp CCEEEEEETCCSSHHHHHHHHH--------------HHHHHHHHHHHTTCCCCCEEEEEEEC
T ss_pred CceEEEecCCCCChhHHHHHHH--------------HHHHHHHHHhhcCCCCCceeEEecCC
Confidence 3579999999999998887653 44444444443321123588888775
No 318
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=69.70 E-value=8 Score=37.86 Aligned_cols=61 Identities=15% Similarity=0.168 Sum_probs=45.4
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHHCCC-------------------CCCcEEEEEccC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPH-------------------ISELIEIRKVDN 176 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~n~~-------------------l~~rI~~~~~d~ 176 (414)
...|+.||||....+-.|....++.+++-+|. |+.++.-++-+...+. ..++..++-+|.
T Consensus 98 ~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~DL 176 (334)
T 1rjd_A 98 KVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACDL 176 (334)
T ss_dssp SEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECCT
T ss_pred CcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecCC
Confidence 36899999999999888876556667777777 8888888887766521 125678888876
Q ss_pred C
Q 015035 177 S 177 (414)
Q Consensus 177 ~ 177 (414)
.
T Consensus 177 ~ 177 (334)
T 1rjd_A 177 N 177 (334)
T ss_dssp T
T ss_pred C
Confidence 5
No 319
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=68.73 E-value=6.3 Score=38.81 Aligned_cols=40 Identities=15% Similarity=0.078 Sum_probs=31.6
Q ss_pred CCeEEEECCcc-cHHHHHHHHHhcCC-eeEEecCcHHHHHHHH
Q 015035 116 KVKGFDIGTGA-NCIYPLLGASLLGW-SFVGSDMTDVALEWAE 156 (414)
Q Consensus 116 ~~~vLDIGtGs-G~I~i~La~~~~~~-~vvgvDis~~Al~~A~ 156 (414)
..+||-+|+|. |.+++.+|+. .++ +|+++|.+++.++.|+
T Consensus 186 g~~VlV~GaG~vG~~aiqlak~-~Ga~~Vi~~~~~~~~~~~a~ 227 (398)
T 2dph_A 186 GSHVYIAGAGPVGRCAAAGARL-LGAACVIVGDQNPERLKLLS 227 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH-HTCSEEEEEESCHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHH-cCCCEEEEEcCCHHHHHHHH
Confidence 46899999876 6666677765 466 9999999999888775
No 320
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=66.82 E-value=6.5 Score=39.69 Aligned_cols=45 Identities=13% Similarity=-0.004 Sum_probs=34.9
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCC---eeEEecCcHHHHHHHHHHHH
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGW---SFVGSDMTDVALEWAEKNVK 160 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~---~vvgvDis~~Al~~A~~N~~ 160 (414)
..+++|+.||.|.+...+-... ... .|.++|+|+.|++.-+.|..
T Consensus 10 ~lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~ 59 (403)
T 4dkj_A 10 VIKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHS 59 (403)
T ss_dssp EEEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHHC
T ss_pred cceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHcC
Confidence 4689999999999887765533 121 27789999999998888864
No 321
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=66.07 E-value=9.3 Score=37.07 Aligned_cols=41 Identities=22% Similarity=0.214 Sum_probs=31.5
Q ss_pred CCeEEEECCcc-cHHHHHHHHHhcCC-eeEEecCcHHHHHHHHH
Q 015035 116 KVKGFDIGTGA-NCIYPLLGASLLGW-SFVGSDMTDVALEWAEK 157 (414)
Q Consensus 116 ~~~vLDIGtGs-G~I~i~La~~~~~~-~vvgvDis~~Al~~A~~ 157 (414)
..+||-+|+|. |.+++.+|+. .++ +|+++|.+++.++.|++
T Consensus 191 g~~VlV~GaG~vG~~a~qlak~-~Ga~~Vi~~~~~~~~~~~a~~ 233 (371)
T 1f8f_A 191 ASSFVTWGAGAVGLSALLAAKV-CGASIIIAVDIVESRLELAKQ 233 (371)
T ss_dssp TCEEEEESCSHHHHHHHHHHHH-HTCSEEEEEESCHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHH-cCCCeEEEECCCHHHHHHHHH
Confidence 45899999875 5566666664 466 79999999999998864
No 322
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=66.03 E-value=21 Score=33.38 Aligned_cols=59 Identities=14% Similarity=0.074 Sum_probs=45.1
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~ 178 (414)
...+|=-|.++| |+..++.++ .+++|+.+|++++.++.+.+.++..+ .++..++.|..+
T Consensus 7 gKvalVTGas~G-IG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g---~~~~~~~~Dvt~ 67 (254)
T 4fn4_A 7 NKVVIVTGAGSG-IGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMG---KEVLGVKADVSK 67 (254)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTTS
T ss_pred CCEEEEeCCCCH-HHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEEccCCC
Confidence 356777786666 677766654 58999999999999988888887664 468888998653
No 323
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=65.64 E-value=7.6 Score=35.77 Aligned_cols=60 Identities=12% Similarity=0.077 Sum_probs=42.1
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
..++|=.|.+ |-|+..++.++ .+++|+.+|.+++.++.+.+.+.... ...++.++..|..
T Consensus 10 ~k~~lVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~D~~ 71 (267)
T 3t4x_A 10 GKTALVTGST-AGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQY-PDAILQPVVADLG 71 (267)
T ss_dssp TCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHC-TTCEEEEEECCTT
T ss_pred CCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhC-CCceEEEEecCCC
Confidence 3467777755 55777777654 47999999999998877766665542 2346777777754
No 324
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=65.58 E-value=9.9 Score=36.40 Aligned_cols=42 Identities=17% Similarity=0.172 Sum_probs=32.9
Q ss_pred CCeEEEECCcc-cHHHHHHHHHhcCCeeEEecCcHHHHHHHHH
Q 015035 116 KVKGFDIGTGA-NCIYPLLGASLLGWSFVGSDMTDVALEWAEK 157 (414)
Q Consensus 116 ~~~vLDIGtGs-G~I~i~La~~~~~~~vvgvDis~~Al~~A~~ 157 (414)
..+||=+|+|. |.+++.+|+...+.+|+++|.+++-++.|++
T Consensus 172 g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~ 214 (345)
T 3jv7_A 172 GSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALARE 214 (345)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH
Confidence 45788888865 5566667776657899999999999988864
No 325
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=65.37 E-value=2.8 Score=41.11 Aligned_cols=35 Identities=14% Similarity=0.013 Sum_probs=26.0
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcHH
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDV 150 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~ 150 (414)
..+||||||+.|--.-..+.......|+|+|+-..
T Consensus 95 ~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~ 129 (321)
T 3lkz_A 95 VGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGP 129 (321)
T ss_dssp CEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCST
T ss_pred CCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCC
Confidence 35999999999988765554333347999999754
No 326
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=65.05 E-value=3.6 Score=39.30 Aligned_cols=34 Identities=12% Similarity=-0.032 Sum_probs=26.3
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecCcH
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTD 149 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~ 149 (414)
..+||||||+.|--.-..+......+|+|+|+-.
T Consensus 79 g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~ 112 (267)
T 3p8z_A 79 EGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGG 112 (267)
T ss_dssp CEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCS
T ss_pred CCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCC
Confidence 3599999999999887666544334799999964
No 327
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=64.36 E-value=1.1 Score=44.71 Aligned_cols=20 Identities=10% Similarity=0.001 Sum_probs=15.2
Q ss_pred CCCeEEEECCcccHHHHHHH
Q 015035 115 DKVKGFDIGTGANCIYPLLG 134 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La 134 (414)
...+|+|+||++|--++.+.
T Consensus 51 ~~~~IaDlGCs~G~Nt~~~v 70 (359)
T 1m6e_X 51 TRLAIADLGCSSGPNALFAV 70 (359)
T ss_dssp SEECCEEESCCSSTTTTTGG
T ss_pred CceEEEecCCCCCcchHHHH
Confidence 34789999999997665443
No 328
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=63.64 E-value=3.7 Score=40.08 Aligned_cols=35 Identities=17% Similarity=0.017 Sum_probs=27.3
Q ss_pred CCCeEEEECCcccHHHHHHHHHhcCCeeEEecCcH
Q 015035 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTD 149 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~ 149 (414)
...+||||||+.|.-.-.++.+.+-..|+|+|+..
T Consensus 81 ~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~ 115 (300)
T 3eld_A 81 ITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGI 115 (300)
T ss_dssp CCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCC
T ss_pred CCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecc
Confidence 34689999999999887777654445788999864
No 329
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=61.66 E-value=26 Score=31.84 Aligned_cols=60 Identities=15% Similarity=0.011 Sum_probs=43.1
Q ss_pred CCeEEEECC-cccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCC
Q 015035 116 KVKGFDIGT-GANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (414)
Q Consensus 116 ~~~vLDIGt-GsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~ 178 (414)
..++|=.|. |+| |+..++..+ .+++|+.+|.+++.++.+.+.++..+ ..++.++..|..+
T Consensus 22 ~k~vlITGasg~G-IG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dl~~ 84 (266)
T 3o38_A 22 GKVVLVTAAAGTG-IGSTTARRALLEGADVVISDYHERRLGETRDQLADLG--LGRVEAVVCDVTS 84 (266)
T ss_dssp TCEEEESSCSSSS-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTC--SSCEEEEECCTTC
T ss_pred CCEEEEECCCCCc-hHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcC--CCceEEEEeCCCC
Confidence 346776665 455 666666544 47899999999998888777775542 3579999998753
No 330
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=60.73 E-value=13 Score=36.37 Aligned_cols=41 Identities=17% Similarity=0.168 Sum_probs=30.7
Q ss_pred CCeEEEECCcc-cHHHHHHHHHhcCC-eeEEecCcHHHHHHHHH
Q 015035 116 KVKGFDIGTGA-NCIYPLLGASLLGW-SFVGSDMTDVALEWAEK 157 (414)
Q Consensus 116 ~~~vLDIGtGs-G~I~i~La~~~~~~-~vvgvDis~~Al~~A~~ 157 (414)
..+||-+|+|. |.+++.+|+. .++ +|+++|.+++.++.|++
T Consensus 186 g~~VlV~GaG~vG~~aiqlAk~-~Ga~~Vi~~~~~~~~~~~a~~ 228 (398)
T 1kol_A 186 GSTVYVAGAGPVGLAAAASARL-LGAAVVIVGDLNPARLAHAKA 228 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH-TTCSEEEEEESCHHHHHHHHH
T ss_pred CCEEEEECCcHHHHHHHHHHHH-CCCCeEEEEcCCHHHHHHHHH
Confidence 45888899765 5556666664 466 79999999999988853
No 331
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=60.12 E-value=36 Score=31.15 Aligned_cols=59 Identities=20% Similarity=0.120 Sum_probs=43.1
Q ss_pred CeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 117 ~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
.++|=.|. +|.|+..++..+ .+++|++++.++..++...+.++..+ ...++.++..|..
T Consensus 33 k~vlVTGa-sggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~ 93 (279)
T 1xg5_A 33 RLALVTGA-SGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAG-YPGTLIPYRCDLS 93 (279)
T ss_dssp CEEEEEST-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CSSEEEEEECCTT
T ss_pred CEEEEECC-CchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcC-CCceEEEEEecCC
Confidence 46777775 456777777654 47899999999988877666666553 4457888888864
No 332
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=59.41 E-value=14 Score=35.34 Aligned_cols=42 Identities=14% Similarity=0.075 Sum_probs=31.6
Q ss_pred CCeEEEECCcc-cHHHHHHHHHh-cCCeeEEecCcHHHHHHHHH
Q 015035 116 KVKGFDIGTGA-NCIYPLLGASL-LGWSFVGSDMTDVALEWAEK 157 (414)
Q Consensus 116 ~~~vLDIGtGs-G~I~i~La~~~-~~~~vvgvDis~~Al~~A~~ 157 (414)
..+||-+|+|. |.+++.+|+.. ++++|+++|.+++.++.|++
T Consensus 171 g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~ 214 (344)
T 2h6e_A 171 EPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALE 214 (344)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHH
Confidence 35899999864 44555566644 27899999999999888865
No 333
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=59.17 E-value=29 Score=31.86 Aligned_cols=60 Identities=15% Similarity=0.017 Sum_probs=44.2
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~ 178 (414)
+.++|=.|+++ .|+..++.++ .+++|++++.++..++.+.+.++..+ ..++.++..|..+
T Consensus 12 ~k~vlITGas~-GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dl~~ 73 (311)
T 3o26_A 12 RRCAVVTGGNK-GIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSN--HENVVFHQLDVTD 73 (311)
T ss_dssp CCEEEESSCSS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT--CCSEEEEECCTTS
T ss_pred CcEEEEecCCc-hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CCceEEEEccCCC
Confidence 34677777654 4777777654 47899999999998887777776543 3578999988753
No 334
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=58.68 E-value=35 Score=30.62 Aligned_cols=59 Identities=24% Similarity=0.206 Sum_probs=44.3
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~ 178 (414)
..++|=.|++ |-|+..++.++ .+++|+++|.+++.++.+.+.++..+ .++.++..|..+
T Consensus 9 ~k~vlITGas-~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~ 69 (253)
T 3qiv_A 9 NKVGIVTGSG-GGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADG---GTAISVAVDVSD 69 (253)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CEEEEEECCTTS
T ss_pred CCEEEEECCC-ChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC---CcEEEEEccCCC
Confidence 3578888865 45777777654 47899999999999888777776553 468888888653
No 335
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=58.62 E-value=15 Score=35.33 Aligned_cols=41 Identities=22% Similarity=0.291 Sum_probs=30.6
Q ss_pred CCeEEEECCcc-cHHHHHHHHHhcCC-eeEEecCcHHHHHHHHH
Q 015035 116 KVKGFDIGTGA-NCIYPLLGASLLGW-SFVGSDMTDVALEWAEK 157 (414)
Q Consensus 116 ~~~vLDIGtGs-G~I~i~La~~~~~~-~vvgvDis~~Al~~A~~ 157 (414)
..+||-+|+|+ |.+++.+|+. .++ +|+++|.+++.++.|++
T Consensus 172 g~~VlV~GaG~vG~~aiqlak~-~Ga~~Vi~~~~~~~~~~~a~~ 214 (356)
T 1pl8_A 172 GHKVLVCGAGPIGMVTLLVAKA-MGAAQVVVTDLSATRLSKAKE 214 (356)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH-TTCSEEEEEESCHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHH-cCCCEEEEECCCHHHHHHHHH
Confidence 45899999764 5555556654 467 89999999998888753
No 336
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=58.03 E-value=40 Score=30.72 Aligned_cols=59 Identities=19% Similarity=0.034 Sum_probs=44.6
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~ 178 (414)
..++|=.|.++| |+..++..+ .+++|+.+|.+++.++.+.+.+...+ .++.++..|..+
T Consensus 11 ~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~ 71 (264)
T 3ucx_A 11 DKVVVISGVGPA-LGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTG---RRALSVGTDITD 71 (264)
T ss_dssp TCEEEEESCCTT-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTTC
T ss_pred CcEEEEECCCcH-HHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEEcCCCC
Confidence 357888887765 666666654 47899999999999888777776653 468889888653
No 337
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=57.95 E-value=40 Score=30.84 Aligned_cols=58 Identities=22% Similarity=0.096 Sum_probs=42.9
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
..++|=.|.+ |.|+..++..+ .+++|+++|.++..++...+.++..+ .++.++..|..
T Consensus 31 ~k~vlITGas-ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dl~ 90 (272)
T 1yb1_A 31 GEIVLITGAG-HGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLG---AKVHTFVVDCS 90 (272)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTT
T ss_pred CCEEEEECCC-chHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcC---CeEEEEEeeCC
Confidence 3577877754 56888877754 47899999999988877666666543 46888888864
No 338
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=57.93 E-value=42 Score=30.03 Aligned_cols=58 Identities=12% Similarity=0.058 Sum_probs=42.1
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
..++|=.|.+ |.|+..++..+ .+++|++++.++..++...+.++..+ .++.++..|..
T Consensus 13 ~k~vlItGas-ggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~D~~ 72 (260)
T 3awd_A 13 NRVAIVTGGA-QNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEG---HDVSSVVMDVT 72 (260)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTT
T ss_pred CCEEEEeCCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CceEEEEecCC
Confidence 3567877754 66887777754 47899999999887776666665543 46888888865
No 339
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=57.86 E-value=9.5 Score=31.31 Aligned_cols=49 Identities=18% Similarity=0.113 Sum_probs=34.7
Q ss_pred CeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 117 ~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
.+++=+|+| -++..++..+ .+++|+++|.+++.++.++. .+ +.++.+|.
T Consensus 7 ~~v~I~G~G--~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~----~~-----~~~~~gd~ 57 (141)
T 3llv_A 7 YEYIVIGSE--AAGVGLVRELTAAGKKVLAVDKSKEKIELLED----EG-----FDAVIADP 57 (141)
T ss_dssp CSEEEECCS--HHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----TT-----CEEEECCT
T ss_pred CEEEEECCC--HHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH----CC-----CcEEECCC
Confidence 468888875 4777777654 47899999999998776543 22 45666764
No 340
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=57.74 E-value=11 Score=42.59 Aligned_cols=44 Identities=18% Similarity=0.113 Sum_probs=34.4
Q ss_pred CCCCeEEEECCcccHHHHHHHHHhcCC--eeEEecCcHHHHHHHHHHH
Q 015035 114 GDKVKGFDIGTGANCIYPLLGASLLGW--SFVGSDMTDVALEWAEKNV 159 (414)
Q Consensus 114 ~~~~~vLDIGtGsG~I~i~La~~~~~~--~vvgvDis~~Al~~A~~N~ 159 (414)
....+++||-||.|.+.+.|. ..++ .+.|+|+++.|.+.-+.|.
T Consensus 538 ~~~l~~iDLFaG~GGlslGl~--~AG~~~vv~avEid~~A~~ty~~N~ 583 (1002)
T 3swr_A 538 LPKLRTLDVFSGCGGLSEGFH--QAGISDTLWAIEMWDPAAQAFRLNN 583 (1002)
T ss_dssp CCCEEEEEESCTTSHHHHHHH--HHTSEEEEEEECSSHHHHHHHHHHC
T ss_pred CCCCeEEEeccCccHHHHHHH--HCCCCceEEEEECCHHHHHHHHHhC
Confidence 345689999999998876554 3465 4679999999998887773
No 341
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=57.54 E-value=34 Score=30.62 Aligned_cols=57 Identities=12% Similarity=0.010 Sum_probs=42.1
Q ss_pred CeEEEECCcccHHHHHHHHHh---cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 117 VKGFDIGTGANCIYPLLGASL---LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 117 ~~vLDIGtGsG~I~i~La~~~---~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
.++|=.| |+|.|+..++..+ .+++|++++.++..++.+.+.++..+ .++.++..|..
T Consensus 5 k~vlITG-asggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dl~ 64 (276)
T 1wma_A 5 HVALVTG-GNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEG---LSPRFHQLDID 64 (276)
T ss_dssp CEEEESS-CSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTT---CCCEEEECCTT
T ss_pred CEEEEeC-CCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcC---CeeEEEECCCC
Confidence 4677666 5677888877754 57899999999988877766666543 46888888864
No 342
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=57.50 E-value=37 Score=31.81 Aligned_cols=59 Identities=19% Similarity=0.048 Sum_probs=44.8
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~ 178 (414)
..++|=.|+++| |+..++..+ .+++|++++.+++.++.+.+.++..+ .++.++..|..+
T Consensus 31 gk~vlVTGas~g-IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dv~d 91 (301)
T 3tjr_A 31 GRAAVVTGGASG-IGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQG---FDAHGVVCDVRH 91 (301)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTTC
T ss_pred CCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---CceEEEEccCCC
Confidence 357888887755 777777654 47899999999999988877776653 468888888653
No 343
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=56.71 E-value=7.6 Score=35.33 Aligned_cols=59 Identities=10% Similarity=-0.116 Sum_probs=41.1
Q ss_pred CCCeEEEECCc-ccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 115 DKVKGFDIGTG-ANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 115 ~~~~vLDIGtG-sG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
+..++|=.|.+ +|.|+..++..+ .+++|+.++.+....+.+++-.+..+ ++.++..|..
T Consensus 13 ~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~Dv~ 74 (271)
T 3ek2_A 13 DGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFG----SELVFPCDVA 74 (271)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTT----CCCEEECCTT
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcC----CcEEEECCCC
Confidence 45688888874 366887777654 47899999998766665555555543 3677888864
No 344
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=56.51 E-value=23 Score=27.37 Aligned_cols=38 Identities=21% Similarity=0.121 Sum_probs=28.0
Q ss_pred CeEEEECCcccHHHHHHHHHh--cC-CeeEEecCcHHHHHHHH
Q 015035 117 VKGFDIGTGANCIYPLLGASL--LG-WSFVGSDMTDVALEWAE 156 (414)
Q Consensus 117 ~~vLDIGtGsG~I~i~La~~~--~~-~~vvgvDis~~Al~~A~ 156 (414)
.+|+=+|+ |.++..++..+ .+ ++|+++|.+++.++.+.
T Consensus 6 ~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~ 46 (118)
T 3ic5_A 6 WNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN 46 (118)
T ss_dssp EEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH
T ss_pred CeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH
Confidence 47888887 66777666543 35 78999999998776554
No 345
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=56.37 E-value=19 Score=33.09 Aligned_cols=55 Identities=11% Similarity=0.027 Sum_probs=39.7
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
..++|=.|.++| |+..++..+ .+++|+.+|.+++.++.+.+.+ ..++.++..|..
T Consensus 30 ~k~vlVTGas~G-IG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~------~~~~~~~~~Dl~ 86 (281)
T 3ppi_A 30 GASAIVSGGAGG-LGEATVRRLHADGLGVVIADLAAEKGKALADEL------GNRAEFVSTNVT 86 (281)
T ss_dssp TEEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH------CTTEEEEECCTT
T ss_pred CCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh------CCceEEEEcCCC
Confidence 346787886655 777777654 4789999999998876655443 246888888864
No 346
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=56.28 E-value=11 Score=35.91 Aligned_cols=56 Identities=11% Similarity=-0.054 Sum_probs=39.9
Q ss_pred CCCeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 115 DKVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
+...+|=-|.++| |+..++.++ .+++|+.+|.+++.++.+.+.+ + .++..+..|..
T Consensus 28 ~gKvalVTGas~G-IG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~---g---~~~~~~~~Dv~ 85 (273)
T 4fgs_A 28 NAKIAVITGATSG-IGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI---G---GGAVGIQADSA 85 (273)
T ss_dssp TTCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---C---TTCEEEECCTT
T ss_pred CCCEEEEeCcCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---C---CCeEEEEecCC
Confidence 3456777787766 777777654 5899999999999887664433 2 35667788864
No 347
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=54.88 E-value=41 Score=30.58 Aligned_cols=59 Identities=14% Similarity=0.113 Sum_probs=43.7
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~ 178 (414)
..++|=.|.++| |+..++.++ .+++|+.+|.+++.++.+.+.++..+ .++.++..|..+
T Consensus 12 ~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~d 72 (256)
T 3gaf_A 12 DAVAIVTGAAAG-IGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAG---GKAIGLECNVTD 72 (256)
T ss_dssp TCEEEECSCSSH-HHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTT---CCEEEEECCTTC
T ss_pred CCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEECCCCC
Confidence 356777776654 777776654 47899999999998887777776653 468888888653
No 348
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=54.66 E-value=37 Score=30.89 Aligned_cols=58 Identities=19% Similarity=0.089 Sum_probs=44.0
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
..++|=.|++ |.|+..++..+ .+++|++++.+++.++...+.+...+ .++.++..|..
T Consensus 29 ~k~vlITGas-~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~ 88 (262)
T 3rkr_A 29 GQVAVVTGAS-RGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAG---GEAESHACDLS 88 (262)
T ss_dssp TCEEEESSTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CEEEEEECCTT
T ss_pred CCEEEEECCC-ChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhC---CceeEEEecCC
Confidence 3567777765 55887777654 47899999999999888777776653 46888888865
No 349
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=54.42 E-value=46 Score=30.55 Aligned_cols=61 Identities=18% Similarity=0.043 Sum_probs=44.3
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
..++|=.|.+ |-|+..++..+ .+++|+.+|.+++.++.+.+.++..+.-..++.++..|..
T Consensus 11 ~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~ 73 (281)
T 3svt_A 11 DRTYLVTGGG-SGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDIT 73 (281)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTT
T ss_pred CCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCC
Confidence 3578888865 45777777654 4789999999999988877777655311237888888865
No 350
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=54.22 E-value=41 Score=29.89 Aligned_cols=57 Identities=16% Similarity=0.052 Sum_probs=41.5
Q ss_pred CeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 117 ~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
.++|=.| |+|.|+..++..+ .+++|+++|.++..++...+.++..+ .++.++..|..
T Consensus 12 ~~vlVtG-asggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~ 70 (255)
T 1fmc_A 12 KCAIITG-AGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLG---GQAFACRCDIT 70 (255)
T ss_dssp CEEEETT-TTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTT
T ss_pred CEEEEEC-CccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhC---CceEEEEcCCC
Confidence 4677666 4577888877765 47899999999988876666665542 46888888864
No 351
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=53.83 E-value=39 Score=31.38 Aligned_cols=57 Identities=11% Similarity=0.063 Sum_probs=41.1
Q ss_pred CeEEEECCcccHHHHHHHHHh--cCCeeEEec-CcHHHHHHHHHHHH-HCCCCCCcEEEEEccCC
Q 015035 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSD-MTDVALEWAEKNVK-SNPHISELIEIRKVDNS 177 (414)
Q Consensus 117 ~~vLDIGtGsG~I~i~La~~~--~~~~vvgvD-is~~Al~~A~~N~~-~n~~l~~rI~~~~~d~~ 177 (414)
..+|=.|.+ |.|+..++..+ .+++|+.++ .+++.++.+.+.+. ..+ .++.++..|..
T Consensus 10 k~~lVTGas-~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~---~~~~~~~~Dl~ 70 (291)
T 1e7w_A 10 PVALVTGAA-KRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRP---NSAITVQADLS 70 (291)
T ss_dssp CEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST---TCEEEEECCCS
T ss_pred CEEEEECCC-chHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcC---CeeEEEEeecC
Confidence 467766755 45787777654 478999999 99988877666665 332 46888888864
No 352
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=53.68 E-value=21 Score=34.29 Aligned_cols=40 Identities=23% Similarity=0.176 Sum_probs=29.5
Q ss_pred CCeEEEECCcc-cHHHHHHHHHhcCCeeEEecCcHHHHHHHH
Q 015035 116 KVKGFDIGTGA-NCIYPLLGASLLGWSFVGSDMTDVALEWAE 156 (414)
Q Consensus 116 ~~~vLDIGtGs-G~I~i~La~~~~~~~vvgvDis~~Al~~A~ 156 (414)
..+||-+|+|. |.+++.+|+ ..+++|+++|.+++.++.|+
T Consensus 169 g~~VlV~GaG~vG~~a~qla~-~~Ga~Vi~~~~~~~~~~~~~ 209 (352)
T 1e3j_A 169 GTTVLVIGAGPIGLVSVLAAK-AYGAFVVCTARSPRRLEVAK 209 (352)
T ss_dssp TCEEEEECCSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHH-HcCCEEEEEcCCHHHHHHHH
Confidence 45788899754 444455555 35788999999999988876
No 353
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=53.32 E-value=22 Score=35.76 Aligned_cols=53 Identities=13% Similarity=0.080 Sum_probs=36.6
Q ss_pred CCeEEEECCcccHHHHHHHHHh-------cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEE
Q 015035 116 KVKGFDIGTGANCIYPLLGASL-------LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIR 172 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~-------~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~ 172 (414)
+..++|+|.|+|.++.-+...+ ...+++.||+|+...+.=++.+... ++|.++
T Consensus 81 ~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~~----~~v~W~ 140 (387)
T 1zkd_A 81 TLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLAGI----RNIHWH 140 (387)
T ss_dssp SEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHSTTC----SSEEEE
T ss_pred CcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhcCC----CCeEEe
Confidence 4689999999999877655432 2358999999998777555444322 256654
No 354
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=53.27 E-value=39 Score=31.19 Aligned_cols=57 Identities=11% Similarity=0.035 Sum_probs=42.4
Q ss_pred CeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 117 ~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
.++|=.|.++| |+..++.++ .+++|+.++.+++.++.+.+.++..+ .++.++..|..
T Consensus 5 k~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dv~ 63 (264)
T 3tfo_A 5 KVILITGASGG-IGEGIARELGVAGAKILLGARRQARIEAIATEIRDAG---GTALAQVLDVT 63 (264)
T ss_dssp CEEEESSTTSH-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT---CEEEEEECCTT
T ss_pred CEEEEeCCccH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEEcCCC
Confidence 46777776644 777777654 57899999999999888777776653 46888888864
No 355
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=53.09 E-value=46 Score=29.63 Aligned_cols=57 Identities=18% Similarity=0.078 Sum_probs=42.6
Q ss_pred CeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 117 ~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
.++|=.|.+ |-|+..++.++ .+++|++++.++..++.....++..+ .++.++..|..
T Consensus 6 k~vlITGas-~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~ 64 (247)
T 3lyl_A 6 KVALVTGAS-RGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKG---FKARGLVLNIS 64 (247)
T ss_dssp CEEEESSCS-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT---CCEEEEECCTT
T ss_pred CEEEEECCC-ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CceEEEEecCC
Confidence 467777754 55777777654 47899999999998887777776653 46888888865
No 356
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=52.96 E-value=34 Score=31.08 Aligned_cols=58 Identities=16% Similarity=0.023 Sum_probs=42.7
Q ss_pred CeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCC
Q 015035 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (414)
Q Consensus 117 ~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~ 178 (414)
.++|=.|.+ |-|+..++..+ .+++|+.+|.+++.++.+.+.++.. ..++.++..|..+
T Consensus 7 k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~ 66 (257)
T 3imf_A 7 KVVIITGGS-SGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQF---PGQILTVQMDVRN 66 (257)
T ss_dssp CEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCS---TTCEEEEECCTTC
T ss_pred CEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCcEEEEEccCCC
Confidence 467777755 45777777654 4789999999999988777766543 3578889988653
No 357
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=52.76 E-value=23 Score=33.69 Aligned_cols=42 Identities=17% Similarity=0.172 Sum_probs=31.5
Q ss_pred CCeEEEECCcccH-HHHHHHHHhcCCeeEEecCcHHHHHHHHH
Q 015035 116 KVKGFDIGTGANC-IYPLLGASLLGWSFVGSDMTDVALEWAEK 157 (414)
Q Consensus 116 ~~~vLDIGtGsG~-I~i~La~~~~~~~vvgvDis~~Al~~A~~ 157 (414)
..+||=+|+|++. +++.+++...+.+|+++|.+++-++.|++
T Consensus 164 g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~ 206 (348)
T 4eez_A 164 GDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKK 206 (348)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHH
T ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhh
Confidence 3578888988654 44555666678899999999998877654
No 358
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=52.51 E-value=23 Score=33.94 Aligned_cols=42 Identities=19% Similarity=0.340 Sum_probs=30.4
Q ss_pred CCeEEEECCccc--HHHHHHHHHhcCCeeEEecCcHHHHHHHHH
Q 015035 116 KVKGFDIGTGAN--CIYPLLGASLLGWSFVGSDMTDVALEWAEK 157 (414)
Q Consensus 116 ~~~vLDIGtGsG--~I~i~La~~~~~~~vvgvDis~~Al~~A~~ 157 (414)
..++|-+|+|+| ...+.+++...+++|+++|.+++.++.+++
T Consensus 171 g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~ 214 (347)
T 1jvb_A 171 TKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR 214 (347)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH
T ss_pred CCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH
Confidence 468999998744 334444544438899999999999888754
No 359
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=52.48 E-value=15 Score=35.89 Aligned_cols=41 Identities=20% Similarity=0.097 Sum_probs=30.7
Q ss_pred CCeEEEECCcc-cHHHHHHHHHhcCCeeEEecCcHHHHHHHHH
Q 015035 116 KVKGFDIGTGA-NCIYPLLGASLLGWSFVGSDMTDVALEWAEK 157 (414)
Q Consensus 116 ~~~vLDIGtGs-G~I~i~La~~~~~~~vvgvDis~~Al~~A~~ 157 (414)
..+||-+|+|. |.+++.+|+ ..+++|+++|.+++.++.|++
T Consensus 195 g~~VlV~GaG~vG~~aiqlak-~~Ga~Vi~~~~~~~~~~~a~~ 236 (369)
T 1uuf_A 195 GKKVGVVGIGGLGHMGIKLAH-AMGAHVVAFTTSEAKREAAKA 236 (369)
T ss_dssp TCEEEEECCSHHHHHHHHHHH-HTTCEEEEEESSGGGHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHH
Confidence 45888899864 445555555 357899999999999888864
No 360
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=52.48 E-value=44 Score=31.01 Aligned_cols=58 Identities=16% Similarity=0.074 Sum_probs=42.9
Q ss_pred CeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCC
Q 015035 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (414)
Q Consensus 117 ~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~ 178 (414)
..+|=.|.++| |+..++.++ .+++|+.+|.+++.++.+.+.+... ..++.++..|..+
T Consensus 29 k~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dv~d 88 (283)
T 3v8b_A 29 PVALITGAGSG-IGRATALALAADGVTVGALGRTRTEVEEVADEIVGA---GGQAIALEADVSD 88 (283)
T ss_dssp CEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTT---TCCEEEEECCTTC
T ss_pred CEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCcEEEEEccCCC
Confidence 56788886655 777777654 4789999999999887777666543 3578888888653
No 361
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=51.62 E-value=85 Score=30.47 Aligned_cols=73 Identities=16% Similarity=0.166 Sum_probs=42.1
Q ss_pred CcEEEEEECCCcccccccccCCCccccCCCCCcccccCChHHHHHHHHHHHHHhhccCcEEEEEeCCcCCHHHHHHHHHH
Q 015035 240 EQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRK 319 (414)
Q Consensus 240 ~~fD~imcNPPy~~s~ee~~~~P~~a~~g~~~Em~~~GGe~~Fv~rii~eS~~l~~~~~w~t~mvgk~~~l~~l~~~l~~ 319 (414)
.+||.+.--+ |- |.. .-|||. .++..+| ..++.++|.+++ ++..-.|...|.+
T Consensus 185 ~~~Da~flDg-Fs---------P~k-----NPeLWs----~e~f~~l----~~~~~pgg~laT----Ytaag~VRR~L~~ 237 (308)
T 3vyw_A 185 FKADAVFHDA-FS---------PYK-----NPELWT----LDFLSLI----KERIDEKGYWVS----YSSSLSVRKSLLT 237 (308)
T ss_dssp CCEEEEEECC-SC---------TTT-----SGGGGS----HHHHHHH----HTTEEEEEEEEE----SCCCHHHHHHHHH
T ss_pred cceeEEEeCC-CC---------ccc-----CcccCC----HHHHHHH----HHHhCCCcEEEE----EeCcHHHHHHHHH
Confidence 4689886654 32 211 235664 3455544 456777776654 6667899999999
Q ss_pred cCCceEEEEEecCCCeeEEEEE
Q 015035 320 VGVTIVKTTEFVQGQTCRWGLA 341 (414)
Q Consensus 320 ~g~~~v~~~e~~qG~t~Rw~lA 341 (414)
+||..-+ ..=. |+.+-..+|
T Consensus 238 aGF~V~k-~~G~-g~KReml~A 257 (308)
T 3vyw_A 238 LGFKVGS-SREI-GRKRKGTVA 257 (308)
T ss_dssp TTCEEEE-EECC----CEEEEE
T ss_pred CCCEEEe-cCCC-CCCCceeEE
Confidence 9997433 3322 443333444
No 362
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=51.61 E-value=47 Score=30.64 Aligned_cols=58 Identities=14% Similarity=0.133 Sum_probs=43.3
Q ss_pred CeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCC
Q 015035 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (414)
Q Consensus 117 ~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~ 178 (414)
..+|=.|.++ .|+..++.++ .+++|++++.+++.++.+.+.++..+ .++.++..|..+
T Consensus 25 k~~lVTGas~-GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dv~d 84 (279)
T 3sju_A 25 QTAFVTGVSS-GIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAG---HDVDGSSCDVTS 84 (279)
T ss_dssp CEEEEESTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT---CCEEEEECCTTC
T ss_pred CEEEEeCCCC-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEECCCCC
Confidence 5688888654 4777776654 47899999999998887777766543 468888888653
No 363
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=51.55 E-value=25 Score=31.44 Aligned_cols=32 Identities=16% Similarity=0.213 Sum_probs=28.8
Q ss_pred CCeEEEECCcccHHHHHHHHHhcCCeeEEecC
Q 015035 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDM 147 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~~~~~vvgvDi 147 (414)
.+-|||+|-|.|--|-.|...+|+-+|+.+|-
T Consensus 41 ~GpVlElGLGNGRTydHLRe~~P~R~I~vfDR 72 (174)
T 3iht_A 41 SGPVYELGLGNGRTYHHLRQHVQGREIYVFER 72 (174)
T ss_dssp CSCEEEECCTTCHHHHHHHHHCCSSCEEEEES
T ss_pred CCceEEecCCCChhHHHHHHhCCCCcEEEEEe
Confidence 46799999999999999999999989998884
No 364
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=49.81 E-value=47 Score=31.61 Aligned_cols=58 Identities=10% Similarity=0.067 Sum_probs=41.2
Q ss_pred CeEEEECCcccHHHHHHHHHh--cCCeeEEec-CcHHHHHHHHHHHH-HCCCCCCcEEEEEccCCC
Q 015035 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSD-MTDVALEWAEKNVK-SNPHISELIEIRKVDNSE 178 (414)
Q Consensus 117 ~~vLDIGtGsG~I~i~La~~~--~~~~vvgvD-is~~Al~~A~~N~~-~n~~l~~rI~~~~~d~~~ 178 (414)
..+|=.|.+ |.|+..++..+ .+++|++++ .+++.++.+.+.+. ..+ .++.++..|..+
T Consensus 47 k~~lVTGas-~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~---~~~~~~~~Dl~d 108 (328)
T 2qhx_A 47 PVALVTGAA-KRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRP---NSAITVQADLSN 108 (328)
T ss_dssp CEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST---TCEEEEECCCSS
T ss_pred CEEEEECCC-CHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcC---CeEEEEEeeCCC
Confidence 456666654 55777777654 478999999 99988877666664 332 468888888653
No 365
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=49.15 E-value=53 Score=29.71 Aligned_cols=61 Identities=16% Similarity=0.116 Sum_probs=43.0
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
..++|=.|.++| |+..++..+ .+++|+.++.+++.++.+.+.+.....-..++.++..|..
T Consensus 7 ~k~~lVTGas~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~ 69 (250)
T 3nyw_A 7 KGLAIITGASQG-IGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDIT 69 (250)
T ss_dssp CCEEEEESTTSH-HHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTT
T ss_pred CCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCC
Confidence 356787887655 777766654 4789999999999888777766543211246888888865
No 366
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=48.91 E-value=64 Score=29.35 Aligned_cols=59 Identities=17% Similarity=0.031 Sum_probs=42.9
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCCeeEEecCc------------HHHHHHHHHHHHHCCCCCCcEEEEEccCCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMT------------DVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis------------~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~ 178 (414)
..++|=.|.++| |+..++..+ .+++|+.+|.+ .+.++.+...++..+ .++.++..|..+
T Consensus 10 gk~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~ 82 (287)
T 3pxx_A 10 DKVVLVTGGARG-QGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTG---RKAYTAEVDVRD 82 (287)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTT---SCEEEEECCTTC
T ss_pred CCEEEEeCCCCh-HHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcC---CceEEEEccCCC
Confidence 357888887655 777776654 47899999987 777777776666553 478899988653
No 367
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=48.77 E-value=16 Score=35.07 Aligned_cols=41 Identities=12% Similarity=-0.082 Sum_probs=30.4
Q ss_pred CCeEEEECCcc-cHHHHHHHHHhcCCeeEEecCcHHHHHHHHH
Q 015035 116 KVKGFDIGTGA-NCIYPLLGASLLGWSFVGSDMTDVALEWAEK 157 (414)
Q Consensus 116 ~~~vLDIGtGs-G~I~i~La~~~~~~~vvgvDis~~Al~~A~~ 157 (414)
..+||-+|+|. |..++.+|+ ..+++|+++|.+++-++.|++
T Consensus 177 g~~VlV~GaG~vG~~a~qla~-~~Ga~Vi~~~~~~~~~~~~~~ 218 (348)
T 3two_A 177 GTKVGVAGFGGLGSMAVKYAV-AMGAEVSVFARNEHKKQDALS 218 (348)
T ss_dssp TCEEEEESCSHHHHHHHHHHH-HTTCEEEEECSSSTTHHHHHH
T ss_pred CCEEEEECCcHHHHHHHHHHH-HCCCeEEEEeCCHHHHHHHHh
Confidence 45788888764 445555555 457899999999998888754
No 368
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=48.68 E-value=27 Score=31.25 Aligned_cols=56 Identities=14% Similarity=0.109 Sum_probs=39.1
Q ss_pred CCCeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 115 DKVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
+..++|=.|+++ .|+..++..+ .+++|++++.+++.++...+.+ ..++.++..|..
T Consensus 13 ~~k~vlVTGas~-gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~D~~ 70 (249)
T 3f9i_A 13 TGKTSLITGASS-GIGSAIARLLHKLGSKVIISGSNEEKLKSLGNAL------KDNYTIEVCNLA 70 (249)
T ss_dssp TTCEEEETTTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH------CSSEEEEECCTT
T ss_pred CCCEEEEECCCC-hHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh------ccCccEEEcCCC
Confidence 446788777654 4777777654 4789999999998876554433 235778877754
No 369
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=48.47 E-value=24 Score=33.84 Aligned_cols=41 Identities=15% Similarity=0.015 Sum_probs=29.8
Q ss_pred CCeEEEECCcc-cHHHHHHHHHhcCC-eeEEecCcHHHHHHHHH
Q 015035 116 KVKGFDIGTGA-NCIYPLLGASLLGW-SFVGSDMTDVALEWAEK 157 (414)
Q Consensus 116 ~~~vLDIGtGs-G~I~i~La~~~~~~-~vvgvDis~~Al~~A~~ 157 (414)
..+||=+|+|. |.+++.+|+ ..++ +|+++|.+++.++.|++
T Consensus 167 g~~VlV~GaG~vG~~a~qla~-~~Ga~~Vi~~~~~~~~~~~~~~ 209 (352)
T 3fpc_A 167 GDTVCVIGIGPVGLMSVAGAN-HLGAGRIFAVGSRKHCCDIALE 209 (352)
T ss_dssp TCCEEEECCSHHHHHHHHHHH-TTTCSSEEEECCCHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHH-HcCCcEEEEECCCHHHHHHHHH
Confidence 35788888754 444555554 4566 89999999998888865
No 370
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=48.39 E-value=63 Score=30.04 Aligned_cols=59 Identities=17% Similarity=0.099 Sum_probs=42.6
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCCeeEEecCc------------HHHHHHHHHHHHHCCCCCCcEEEEEccCCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMT------------DVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis------------~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~ 178 (414)
...+|=.|.++| |+..++..+ .+++|+++|.+ ++.++.+.+.++..+ .++.++..|..+
T Consensus 28 gk~~lVTGas~G-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~ 100 (299)
T 3t7c_A 28 GKVAFITGAARG-QGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALG---RRIIASQVDVRD 100 (299)
T ss_dssp TCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTT---CCEEEEECCTTC
T ss_pred CCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcC---CceEEEECCCCC
Confidence 457888887765 777776654 47999999987 777776666666543 578899998653
No 371
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=48.20 E-value=59 Score=29.54 Aligned_cols=60 Identities=15% Similarity=0.029 Sum_probs=43.9
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHH-CCCCCCcEEEEEccCCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKS-NPHISELIEIRKVDNSE 178 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~-n~~l~~rI~~~~~d~~~ 178 (414)
...+|=.|.++| |+..++.++ .+++|+.+|.+++.++.+.+.+.. .+ ..++.++..|..+
T Consensus 8 ~k~~lVTGas~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dv~~ 70 (265)
T 3lf2_A 8 EAVAVVTGGSSG-IGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFP--GARLFASVCDVLD 70 (265)
T ss_dssp TCEEEEETCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHST--TCCEEEEECCTTC
T ss_pred CCEEEEeCCCCh-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC--CceEEEEeCCCCC
Confidence 357788887655 777776654 478999999999998877777665 32 2358888888653
No 372
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=48.19 E-value=15 Score=34.57 Aligned_cols=58 Identities=14% Similarity=0.044 Sum_probs=39.4
Q ss_pred CCeEEEECCccc-HHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 116 KVKGFDIGTGAN-CIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 116 ~~~vLDIGtGsG-~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
..++|=.|.++| -|+..++..+ .+++|+.++.++...+.+++-.+..+ ++.++..|..
T Consensus 31 gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~Dv~ 91 (293)
T 3grk_A 31 GKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELG----AFVAGHCDVA 91 (293)
T ss_dssp TCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHT----CEEEEECCTT
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC----CceEEECCCC
Confidence 357888887643 3666666544 47899999999876666665555442 4778888864
No 373
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=48.13 E-value=71 Score=28.68 Aligned_cols=57 Identities=11% Similarity=0.026 Sum_probs=41.8
Q ss_pred CeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 117 ~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
.++|=.|.+ |.|+..++..+ .+++|++++.+++.++.+.+.+...+ .++.++..|..
T Consensus 8 k~~lVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dv~ 66 (247)
T 2jah_A 8 KVALITGAS-SGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAG---AKVHVLELDVA 66 (247)
T ss_dssp CEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTT
T ss_pred CEEEEECCC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEECCCC
Confidence 568888865 45777777654 47899999999988877666665543 46888888864
No 374
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=48.04 E-value=66 Score=29.48 Aligned_cols=57 Identities=14% Similarity=0.034 Sum_probs=41.7
Q ss_pred CeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 117 ~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
.++|=.|.+ |.|+..++..+ .+++|++++.+++.++.+.+.++..+ .++.++..|..
T Consensus 23 k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dv~ 81 (277)
T 2rhc_B 23 EVALVTGAT-SGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAG---VEADGRTCDVR 81 (277)
T ss_dssp CEEEEETCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTT
T ss_pred CEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CceEEEECCCC
Confidence 568888865 55777777654 47899999999988876666665543 46888888864
No 375
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=47.88 E-value=22 Score=34.48 Aligned_cols=42 Identities=12% Similarity=0.210 Sum_probs=32.2
Q ss_pred CCeEEEEC-Cc-ccHHHHHHHHHhcCCeeEEecCcHHHHHHHHH
Q 015035 116 KVKGFDIG-TG-ANCIYPLLGASLLGWSFVGSDMTDVALEWAEK 157 (414)
Q Consensus 116 ~~~vLDIG-tG-sG~I~i~La~~~~~~~vvgvDis~~Al~~A~~ 157 (414)
..+||=+| +| .|.+++.+|+...+.+|+++|.+++-++.|++
T Consensus 172 g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~ 215 (363)
T 4dvj_A 172 APAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKS 215 (363)
T ss_dssp EEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHH
Confidence 35788887 44 36666777776568899999999998888854
No 376
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=47.51 E-value=21 Score=32.75 Aligned_cols=58 Identities=10% Similarity=-0.011 Sum_probs=39.7
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCCeeEEecC---cHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDM---TDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDi---s~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
..++|=.|.++| |+..++.++ .+++|+.++. +.+.++.+.+.++.. ..++.++..|..
T Consensus 11 ~k~vlVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~ 73 (262)
T 3ksu_A 11 NKVIVIAGGIKN-LGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQ---GAKVALYQSDLS 73 (262)
T ss_dssp TCEEEEETCSSH-HHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTT---TCEEEEEECCCC
T ss_pred CCEEEEECCCch-HHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhc---CCcEEEEECCCC
Confidence 457888887655 788877765 4789999754 455665555555543 257888888864
No 377
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=47.21 E-value=48 Score=29.95 Aligned_cols=57 Identities=14% Similarity=-0.062 Sum_probs=40.8
Q ss_pred CeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 117 ~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
..+|=.|.+ |.|+..++..+ .+++|++++.+++.++.+.+.++..+ .++.++..|..
T Consensus 6 k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~ 64 (260)
T 2qq5_A 6 QVCVVTGAS-RGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLG---GQCVPVVCDSS 64 (260)
T ss_dssp CEEEESSTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHS---SEEEEEECCTT
T ss_pred CEEEEeCCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcC---CceEEEECCCC
Confidence 467777754 55887777654 47899999999988876665554432 46888888864
No 378
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=46.70 E-value=63 Score=29.41 Aligned_cols=59 Identities=19% Similarity=0.099 Sum_probs=41.8
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCCeeEEecCc------------HHHHHHHHHHHHHCCCCCCcEEEEEccCCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMT------------DVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis------------~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~ 178 (414)
..++|=.|.+ |-|+..++.++ .+++|+++|.+ ++.++.+.+.++..+ .++.++..|..+
T Consensus 13 gk~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~ 85 (278)
T 3sx2_A 13 GKVAFITGAA-RGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIG---SRIVARQADVRD 85 (278)
T ss_dssp TCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHT---CCEEEEECCTTC
T ss_pred CCEEEEECCC-ChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcC---CeEEEEeCCCCC
Confidence 3578888855 45777777654 47999999987 777766666555443 478899998653
No 379
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=46.68 E-value=51 Score=30.26 Aligned_cols=58 Identities=12% Similarity=-0.030 Sum_probs=41.4
Q ss_pred CeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 117 ~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
.++|=.|++ |.|+..++..+ .+++|++++.+++.++.....+...+ ..++.++..|..
T Consensus 29 k~vlITGas-ggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~ 88 (286)
T 1xu9_A 29 KKVIVTGAS-KGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG--AASAHYIAGTME 88 (286)
T ss_dssp CEEEESSCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT--CSEEEEEECCTT
T ss_pred CEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhC--CCceEEEeCCCC
Confidence 467877754 56887777654 47899999999988876666555432 136888888864
No 380
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=46.65 E-value=76 Score=29.17 Aligned_cols=61 Identities=16% Similarity=0.033 Sum_probs=43.2
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCC--CCCCcEEEEEccCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNP--HISELIEIRKVDNS 177 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~--~l~~rI~~~~~d~~ 177 (414)
..++|=.|. +|.|+..++..+ .+++|++++.+++.++.+.+.++... ....++.++..|..
T Consensus 18 ~k~vlVTGa-sggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~ 82 (303)
T 1yxm_A 18 GQVAIVTGG-ATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIR 82 (303)
T ss_dssp TCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTT
T ss_pred CCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCC
Confidence 357888885 566888877754 47899999999988877666665420 01246888888864
No 381
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=46.63 E-value=67 Score=29.42 Aligned_cols=59 Identities=19% Similarity=0.139 Sum_probs=41.9
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCCeeEEecCc----------------HHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMT----------------DVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis----------------~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
...+|=.|.++| |+..++..+ .+++|+++|.+ ++.++.+.+.++.. ..++.++..|..
T Consensus 11 ~k~~lVTGas~g-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~ 86 (286)
T 3uve_A 11 GKVAFVTGAARG-QGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGH---NRRIVTAEVDVR 86 (286)
T ss_dssp TCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTT---TCCEEEEECCTT
T ss_pred CCEEEEeCCCch-HHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhc---CCceEEEEcCCC
Confidence 457888887766 777776654 47999999987 67776665555544 357888988865
Q ss_pred C
Q 015035 178 E 178 (414)
Q Consensus 178 ~ 178 (414)
+
T Consensus 87 ~ 87 (286)
T 3uve_A 87 D 87 (286)
T ss_dssp C
T ss_pred C
Confidence 3
No 382
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=45.68 E-value=73 Score=28.79 Aligned_cols=57 Identities=26% Similarity=0.148 Sum_probs=41.4
Q ss_pred CeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 117 ~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
.++|=.|.++| |+..++..+ .+++|+.++.+++.++.+.+.++..+ .++.++..|..
T Consensus 8 k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~ 66 (262)
T 1zem_A 8 KVCLVTGAGGN-IGLATALRLAEEGTAIALLDMNREALEKAEASVREKG---VEARSYVCDVT 66 (262)
T ss_dssp CEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT---SCEEEEECCTT
T ss_pred CEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEEecCC
Confidence 56787776544 777777654 47899999999988876666665432 46888888864
No 383
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=45.47 E-value=36 Score=31.51 Aligned_cols=55 Identities=15% Similarity=0.124 Sum_probs=39.0
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
+.++|=.|.+ |.|+..++.++ .+++|++++.++..++.+.+. +..++.++..|..
T Consensus 16 gk~vlVTGas-~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~------~~~~~~~~~~Dl~ 72 (291)
T 3rd5_A 16 QRTVVITGAN-SGLGAVTARELARRGATVIMAVRDTRKGEAAART------MAGQVEVRELDLQ 72 (291)
T ss_dssp TCEEEEECCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTT------SSSEEEEEECCTT
T ss_pred CCEEEEeCCC-ChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH------hcCCeeEEEcCCC
Confidence 3567777766 45777777654 478999999998876554322 3457889988864
No 384
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=45.15 E-value=74 Score=29.11 Aligned_cols=58 Identities=16% Similarity=0.110 Sum_probs=42.1
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCCeeEEecC-------------cHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDM-------------TDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDi-------------s~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
...+|=.|.++| |+..++.++ .+++|+++|. +++.++.+.+.++..+ .++.++..|..
T Consensus 15 gk~~lVTGas~g-IG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~ 87 (280)
T 3pgx_A 15 GRVAFITGAARG-QGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQG---RKALTRVLDVR 87 (280)
T ss_dssp TCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTT---CCEEEEECCTT
T ss_pred CCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcC---CeEEEEEcCCC
Confidence 356788887655 777777654 4789999998 7777777766666543 56888888865
No 385
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=44.93 E-value=23 Score=34.22 Aligned_cols=41 Identities=12% Similarity=0.002 Sum_probs=29.4
Q ss_pred CCeEEEECCcc-cHHHHHHHHHhcCC-eeEEecCcHHHHHHHHH
Q 015035 116 KVKGFDIGTGA-NCIYPLLGASLLGW-SFVGSDMTDVALEWAEK 157 (414)
Q Consensus 116 ~~~vLDIGtGs-G~I~i~La~~~~~~-~vvgvDis~~Al~~A~~ 157 (414)
..+||-+|+|. |.+++.+|+. .++ +|+++|.+++.++.|++
T Consensus 192 g~~VlV~GaG~vG~~aiqlak~-~Ga~~Vi~~~~~~~~~~~a~~ 234 (373)
T 1p0f_A 192 GSTCAVFGLGGVGFSAIVGCKA-AGASRIIGVGTHKDKFPKAIE 234 (373)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH-HTCSEEEEECSCGGGHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHH-cCCCeEEEECCCHHHHHHHHH
Confidence 45888898754 4444555554 466 89999999998888753
No 386
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=44.74 E-value=80 Score=28.45 Aligned_cols=58 Identities=19% Similarity=0.035 Sum_probs=41.6
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
..++|=.|.+ |.|+..++.++ .+++|++++.+++.++.+.+.++..+ .++.++..|..
T Consensus 9 ~k~vlVTGas-~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~ 68 (260)
T 2ae2_A 9 GCTALVTGGS-RGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKG---FKVEASVCDLS 68 (260)
T ss_dssp TCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CEEEEEECCTT
T ss_pred CCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEEcCCC
Confidence 3568877764 55777777654 47899999999988876666555443 46888888864
No 387
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=44.36 E-value=17 Score=39.18 Aligned_cols=45 Identities=13% Similarity=0.018 Sum_probs=33.6
Q ss_pred CCCeEEEECCcccHHHHHHHHHh--c--CC-eeEEecCcHHHHHHHHHHH
Q 015035 115 DKVKGFDIGTGANCIYPLLGASL--L--GW-SFVGSDMTDVALEWAEKNV 159 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~--~--~~-~vvgvDis~~Al~~A~~N~ 159 (414)
++.++|||=||+|.++.-+-... . +. -+.|+|+|+.|++.=+.|.
T Consensus 211 k~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nh 260 (784)
T 4ft4_B 211 RTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNH 260 (784)
T ss_dssp EEEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHC
T ss_pred CCCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHC
Confidence 45689999999998876554322 1 12 4679999999999888884
No 388
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=44.29 E-value=74 Score=28.80 Aligned_cols=60 Identities=17% Similarity=0.060 Sum_probs=41.7
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
..++|=.|.+ |.|+..++..+ .+++|++++.+++.++.+.+.+.... ...++.++..|..
T Consensus 13 ~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~ 74 (267)
T 1iy8_A 13 DRVVLITGGG-SGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETA-PDAEVLTTVADVS 74 (267)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHC-TTCCEEEEECCTT
T ss_pred CCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc-CCceEEEEEccCC
Confidence 3568888865 55777777654 47899999999988876665554431 1246888888864
No 389
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=44.06 E-value=25 Score=34.06 Aligned_cols=40 Identities=20% Similarity=0.110 Sum_probs=29.2
Q ss_pred CCeEEEECCcc-cHHHHHHHHHhcCC-eeEEecCcHHHHHHHH
Q 015035 116 KVKGFDIGTGA-NCIYPLLGASLLGW-SFVGSDMTDVALEWAE 156 (414)
Q Consensus 116 ~~~vLDIGtGs-G~I~i~La~~~~~~-~vvgvDis~~Al~~A~ 156 (414)
..+||-+|+|. |.+++.+|+. .++ +|+++|.+++.++.|+
T Consensus 193 g~~VlV~GaG~vG~~a~qla~~-~Ga~~Vi~~~~~~~~~~~~~ 234 (374)
T 1cdo_A 193 GSTCAVFGLGAVGLAAVMGCHS-AGAKRIIAVDLNPDKFEKAK 234 (374)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH-TTCSEEEEECSCGGGHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHH-cCCCEEEEEcCCHHHHHHHH
Confidence 35888898754 4445555554 466 8999999999888875
No 390
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=44.05 E-value=38 Score=31.43 Aligned_cols=57 Identities=12% Similarity=-0.024 Sum_probs=41.2
Q ss_pred CeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 117 ~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
.++|=.|.++| |+..++..+ .+++|+++|.+++.++.+.+.+... ..++.++..|..
T Consensus 9 k~vlVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dv~ 67 (280)
T 3tox_A 9 KIAIVTGASSG-IGRAAALLFAREGAKVVVTARNGNALAELTDEIAGG---GGEAAALAGDVG 67 (280)
T ss_dssp CEEEESSTTSH-HHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTT---TCCEEECCCCTT
T ss_pred CEEEEECCCcH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc---CCcEEEEECCCC
Confidence 46777776544 777776654 4789999999999887776666543 346888888764
No 391
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=43.90 E-value=37 Score=32.95 Aligned_cols=41 Identities=20% Similarity=0.120 Sum_probs=30.4
Q ss_pred CCeEEEECCcc-cHHHHHHHHHhcCC-eeEEecCcHHHHHHHHH
Q 015035 116 KVKGFDIGTGA-NCIYPLLGASLLGW-SFVGSDMTDVALEWAEK 157 (414)
Q Consensus 116 ~~~vLDIGtGs-G~I~i~La~~~~~~-~vvgvDis~~Al~~A~~ 157 (414)
..+||=+|+|. |.+++.+|+ ..++ +|+++|.+++.++.|++
T Consensus 183 g~~VlV~GaG~vG~~aiqlak-~~Ga~~Vi~~~~~~~~~~~a~~ 225 (370)
T 4ej6_A 183 GSTVAILGGGVIGLLTVQLAR-LAGATTVILSTRQATKRRLAEE 225 (370)
T ss_dssp TCEEEEECCSHHHHHHHHHHH-HTTCSEEEEECSCHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHH-HcCCCEEEEECCCHHHHHHHHH
Confidence 35788888754 445555665 4566 89999999999988865
No 392
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=43.78 E-value=47 Score=30.34 Aligned_cols=60 Identities=15% Similarity=0.115 Sum_probs=42.8
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~ 178 (414)
..++|=.|.++ -|+..++.++ .+++|+.++.+++.++.+.+.+... ...++.++..|..+
T Consensus 20 ~k~vlVTGas~-gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~Dv~~ 81 (266)
T 4egf_A 20 GKRALITGATK-GIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQ--FGTDVHTVAIDLAE 81 (266)
T ss_dssp TCEEEETTTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH--HCCCEEEEECCTTS
T ss_pred CCEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh--cCCcEEEEEecCCC
Confidence 34677777654 4777777654 4789999999999888776666542 12468899998653
No 393
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=43.71 E-value=18 Score=36.88 Aligned_cols=84 Identities=10% Similarity=0.124 Sum_probs=50.5
Q ss_pred cCCCeeCCCCCcHhH----HHHHHHHHccCCCCCCCCCCCCCeEEEECCcccHHHHHHHHHhc-----CCeeEEecCcHH
Q 015035 80 PDGQLCPTVPNRSNY----IHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLL-----GWSFVGSDMTDV 150 (414)
Q Consensus 80 p~gvLiPriP~R~~y----i~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~i~La~~~~-----~~~vvgvDis~~ 150 (414)
+.|=++-.+.-...| -.|+.+++... + +..++|+|.|+|.++.-+...+. ..+++.||+|+.
T Consensus 107 ~~GDFiTAPeiS~~FGe~la~~~~~~~~~~--------g-~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~ 177 (432)
T 4f3n_A 107 DGSDFVTAPELSPLFAQTLARPVAQALDAS--------G-TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGE 177 (432)
T ss_dssp ---CCSSCGGGHHHHHHHHHHHHHHHHHHH--------T-CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSS
T ss_pred CCCCccCchhhhHHHHHHHHHHHHHHHHhc--------C-CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHH
Confidence 456677653222222 24555555431 1 46899999999998876654331 247999999998
Q ss_pred HHHHHHHHHHHC-CCCCCcEEEE
Q 015035 151 ALEWAEKNVKSN-PHISELIEIR 172 (414)
Q Consensus 151 Al~~A~~N~~~n-~~l~~rI~~~ 172 (414)
.-+.-++.+... +.+..+|.++
T Consensus 178 Lr~~Q~~~L~~~~~~~~~~v~W~ 200 (432)
T 4f3n_A 178 LRARQRETLGAQAPGLAARVRWL 200 (432)
T ss_dssp SHHHHHHHHHHHSTTTGGGEEEE
T ss_pred HHHHHHHHHhccccccCCCceec
Confidence 877777766532 2234567664
No 394
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=43.26 E-value=90 Score=28.44 Aligned_cols=58 Identities=14% Similarity=-0.001 Sum_probs=41.7
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
..++|=.|.+ |.|+..++.++ .+++|++++.+++.++.+.+.++..+ .++.++..|..
T Consensus 21 ~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~ 80 (273)
T 1ae1_A 21 GTTALVTGGS-KGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKG---LNVEGSVCDLL 80 (273)
T ss_dssp TCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTT
T ss_pred CCEEEEECCc-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CceEEEECCCC
Confidence 3568888864 55777777654 47899999999988876666555443 36888888864
No 395
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=43.09 E-value=69 Score=28.20 Aligned_cols=59 Identities=14% Similarity=0.066 Sum_probs=41.7
Q ss_pred CeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCC
Q 015035 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (414)
Q Consensus 117 ~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~ 178 (414)
.++|=.|.+ |.|+..+++++ .+++|+.++.+++.++.+.+.+... ...++.++..|..+
T Consensus 3 k~vlITGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~ 63 (235)
T 3l77_A 3 KVAVITGAS-RGIGEAIARALARDGYALALGARSVDRLEKIAHELMQE--QGVEVFYHHLDVSK 63 (235)
T ss_dssp CEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH--HCCCEEEEECCTTC
T ss_pred CEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh--cCCeEEEEEeccCC
Confidence 356767754 55787777765 4789999999998887776665422 12468888888653
No 396
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=43.07 E-value=77 Score=28.62 Aligned_cols=59 Identities=12% Similarity=-0.036 Sum_probs=40.4
Q ss_pred CeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 117 ~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
.++|=.|.+ |.|+..++..+ .+++|++++.+++.++.+.+.+.... -..++.++..|..
T Consensus 8 k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~D~~ 68 (267)
T 2gdz_A 8 KVALVTGAA-QGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQF-EPQKTLFIQCDVA 68 (267)
T ss_dssp CEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTS-CGGGEEEEECCTT
T ss_pred CEEEEECCC-CcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhc-CCCceEEEecCCC
Confidence 467878854 55777777654 47899999999887766555554321 1346888888864
No 397
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=43.04 E-value=73 Score=28.16 Aligned_cols=58 Identities=10% Similarity=0.039 Sum_probs=39.9
Q ss_pred CeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 117 ~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
.++|=.|. +|.|+..++.++ .+++|++++.++..++...+.+... ...++.++..|..
T Consensus 3 k~vlItGa-sggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~ 62 (250)
T 2cfc_A 3 RVAIVTGA-SSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHA--YADKVLRVRADVA 62 (250)
T ss_dssp CEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTT--TGGGEEEEECCTT
T ss_pred CEEEEeCC-CchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh--cCCcEEEEEecCC
Confidence 35677774 466887777654 4789999999988776655544111 2356888888864
No 398
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=42.97 E-value=51 Score=29.70 Aligned_cols=59 Identities=12% Similarity=0.052 Sum_probs=40.9
Q ss_pred CeEEEECCcccHHHHHHHHHh-----cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 117 VKGFDIGTGANCIYPLLGASL-----LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 117 ~~vLDIGtGsG~I~i~La~~~-----~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
..+|=.|.+ |.|+..++..+ .+++|+++|.+++.++.+.+.+.... -..++.++..|..
T Consensus 7 k~~lVTGas-~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~Dv~ 70 (259)
T 1oaa_A 7 AVCVLTGAS-RGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQ-PDLKVVLAAADLG 70 (259)
T ss_dssp EEEEESSCS-SHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHC-TTSEEEEEECCTT
T ss_pred cEEEEeCCC-ChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhC-CCCeEEEEecCCC
Confidence 456666655 45777777654 47899999999988877666654421 1246888888865
No 399
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=42.89 E-value=90 Score=28.44 Aligned_cols=58 Identities=16% Similarity=0.098 Sum_probs=41.7
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCCeeEEecC-------------cHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDM-------------TDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDi-------------s~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
...+|=.|.++| |+..++..+ .+++|+++|. +++.++.+.+.++..+ .++.++..|..
T Consensus 11 ~k~~lVTGas~G-IG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~D~~ 83 (277)
T 3tsc_A 11 GRVAFITGAARG-QGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAAN---RRIVAAVVDTR 83 (277)
T ss_dssp TCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTT---CCEEEEECCTT
T ss_pred CCEEEEECCccH-HHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcC---CeEEEEECCCC
Confidence 357888886655 777766654 4789999998 6777776666666543 46888888865
No 400
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=42.77 E-value=49 Score=30.46 Aligned_cols=58 Identities=9% Similarity=0.034 Sum_probs=42.7
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
..++|=.|.+ |.|+..++.++ .+++|+.+|.+++.++.+.+.++..+ .++.++..|..
T Consensus 26 gk~~lVTGas-~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dv~ 85 (271)
T 4ibo_A 26 GRTALVTGSS-RGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVG---HDAEAVAFDVT 85 (271)
T ss_dssp TCEEEETTCS-SHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTT---CCEEECCCCTT
T ss_pred CCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CceEEEEcCCC
Confidence 3567777754 55777777654 47899999999999887777776553 46888888764
No 401
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=42.72 E-value=14 Score=34.24 Aligned_cols=56 Identities=14% Similarity=0.151 Sum_probs=38.4
Q ss_pred CeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 117 ~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
.++|=.|.++| |+..++..+ .+++|++++.+++.++...+.+... .++.++..|..
T Consensus 22 k~vlVTGas~g-IG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~Dv~ 79 (272)
T 2nwq_A 22 STLFITGATSG-FGEACARRFAEAGWSLVLTGRREERLQALAGELSAK----TRVLPLTLDVR 79 (272)
T ss_dssp CEEEESSTTTS-SHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT----SCEEEEECCTT
T ss_pred cEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcC----CcEEEEEcCCC
Confidence 46777776544 676666654 4789999999998876655544321 36888888864
No 402
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=42.46 E-value=47 Score=30.64 Aligned_cols=59 Identities=10% Similarity=0.015 Sum_probs=43.1
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~ 178 (414)
..++|=.|.++ .|+..++..+ .+++|+.++.+++.++...+.++..+ .++.++..|..+
T Consensus 32 gk~~lVTGas~-GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dl~d 92 (276)
T 3r1i_A 32 GKRALITGAST-GIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVG---GKALPIRCDVTQ 92 (276)
T ss_dssp TCEEEEESTTS-HHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT---CCCEEEECCTTC
T ss_pred CCEEEEeCCCC-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CeEEEEEcCCCC
Confidence 35778778664 4777776654 47899999999988877777666553 468888888653
No 403
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=42.40 E-value=33 Score=33.33 Aligned_cols=40 Identities=20% Similarity=0.113 Sum_probs=29.0
Q ss_pred CCeEEEECCcc-cHHHHHHHHHhcC-CeeEEecCcHHHHHHHH
Q 015035 116 KVKGFDIGTGA-NCIYPLLGASLLG-WSFVGSDMTDVALEWAE 156 (414)
Q Consensus 116 ~~~vLDIGtGs-G~I~i~La~~~~~-~~vvgvDis~~Al~~A~ 156 (414)
..+||-+|+|. |.+++.+|+. .+ .+|+++|.+++.++.|+
T Consensus 196 g~~VlV~GaG~vG~~aiqlak~-~Ga~~Vi~~~~~~~~~~~~~ 237 (380)
T 1vj0_A 196 GKTVVIQGAGPLGLFGVVIARS-LGAENVIVIAGSPNRLKLAE 237 (380)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH-TTBSEEEEEESCHHHHHHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHH-cCCceEEEEcCCHHHHHHHH
Confidence 45899999543 3344445553 46 59999999999988876
No 404
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=42.33 E-value=79 Score=28.94 Aligned_cols=59 Identities=17% Similarity=0.113 Sum_probs=41.6
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
..++|=.|.+ |.|+..++..+ .+++|++++.++..++.+.+.+... ...++.++..|..
T Consensus 26 ~k~vlITGas-ggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~Dl~ 86 (302)
T 1w6u_A 26 GKVAFITGGG-TGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQ--TGNKVHAIQCDVR 86 (302)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH--HSSCEEEEECCTT
T ss_pred CCEEEEECCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh--cCCceEEEEeCCC
Confidence 3567777754 56787777654 4789999999998887665555432 0246888988865
No 405
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=42.21 E-value=23 Score=41.13 Aligned_cols=43 Identities=19% Similarity=0.149 Sum_probs=34.0
Q ss_pred CCCeEEEECCcccHHHHHHHHHhcCC--eeEEecCcHHHHHHHHHHH
Q 015035 115 DKVKGFDIGTGANCIYPLLGASLLGW--SFVGSDMTDVALEWAEKNV 159 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~La~~~~~~--~vvgvDis~~Al~~A~~N~ 159 (414)
...++|||-||.|.+.+-+- ..++ .+.|+|+++.|++.-+.|.
T Consensus 850 ~~l~viDLFsG~GGlslGfe--~AG~~~vv~avEid~~A~~ty~~N~ 894 (1330)
T 3av4_A 850 PKLRTLDVFSGCGGLSEGFH--QAGISETLWAIEMWDPAAQAFRLNN 894 (1330)
T ss_dssp CCEEEEEETCTTSHHHHHHH--HTTSEEEEEEECCSHHHHHHHHHHC
T ss_pred CCceEEecccCccHHHHHHH--HCCCCceEEEEECCHHHHHHHHHhC
Confidence 35689999999998876554 4565 4779999999999888774
No 406
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=42.11 E-value=41 Score=32.35 Aligned_cols=41 Identities=20% Similarity=0.138 Sum_probs=29.1
Q ss_pred CCeEEEECCcc-cHHHHHHHHHhcCCeeEEecCcHHHHHHHH
Q 015035 116 KVKGFDIGTGA-NCIYPLLGASLLGWSFVGSDMTDVALEWAE 156 (414)
Q Consensus 116 ~~~vLDIGtGs-G~I~i~La~~~~~~~vvgvDis~~Al~~A~ 156 (414)
..+||=+|+|. |.+++.+|+..++++|+++|.+++-++.|+
T Consensus 187 g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~ 228 (359)
T 1h2b_A 187 GAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE 228 (359)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH
Confidence 45888888742 233444555443789999999999888875
No 407
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=41.98 E-value=37 Score=32.56 Aligned_cols=42 Identities=21% Similarity=0.196 Sum_probs=31.0
Q ss_pred CCeEEEECCcc-cHHHHHHHHHhcCCe-eEEecCcHHHHHHHHHH
Q 015035 116 KVKGFDIGTGA-NCIYPLLGASLLGWS-FVGSDMTDVALEWAEKN 158 (414)
Q Consensus 116 ~~~vLDIGtGs-G~I~i~La~~~~~~~-vvgvDis~~Al~~A~~N 158 (414)
..+||=+|+|. |.+++.+|+ ..+++ |+++|.+++.++.|++.
T Consensus 180 g~~VlV~GaG~vG~~aiqlak-~~Ga~~Vi~~~~~~~~~~~a~~l 223 (363)
T 3m6i_A 180 GDPVLICGAGPIGLITMLCAK-AAGACPLVITDIDEGRLKFAKEI 223 (363)
T ss_dssp TCCEEEECCSHHHHHHHHHHH-HTTCCSEEEEESCHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHH-HcCCCEEEEECCCHHHHHHHHHh
Confidence 35788788754 445555665 45666 99999999999999875
No 408
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=41.85 E-value=28 Score=33.60 Aligned_cols=41 Identities=15% Similarity=0.110 Sum_probs=29.4
Q ss_pred CCeEEEECCcc-cHHHHHHHHHhcCC-eeEEecCcHHHHHHHHH
Q 015035 116 KVKGFDIGTGA-NCIYPLLGASLLGW-SFVGSDMTDVALEWAEK 157 (414)
Q Consensus 116 ~~~vLDIGtGs-G~I~i~La~~~~~~-~vvgvDis~~Al~~A~~ 157 (414)
..+||-+|+|. |.+++.+|+. .++ +|+++|.+++.++.|++
T Consensus 191 g~~VlV~GaG~vG~~avqla~~-~Ga~~Vi~~~~~~~~~~~~~~ 233 (373)
T 2fzw_A 191 GSVCAVFGLGGVGLAVIMGCKV-AGASRIIGVDINKDKFARAKE 233 (373)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH-HTCSEEEEECSCGGGHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHH-cCCCeEEEEcCCHHHHHHHHH
Confidence 45788898754 4444455554 466 89999999999888864
No 409
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=41.62 E-value=28 Score=33.62 Aligned_cols=40 Identities=15% Similarity=0.111 Sum_probs=28.9
Q ss_pred CCeEEEECCcc-cHHHHHHHHHhcCC-eeEEecCcHHHHHHHH
Q 015035 116 KVKGFDIGTGA-NCIYPLLGASLLGW-SFVGSDMTDVALEWAE 156 (414)
Q Consensus 116 ~~~vLDIGtGs-G~I~i~La~~~~~~-~vvgvDis~~Al~~A~ 156 (414)
..+||-+|+|. |.+++.+|+. .++ +|+++|.+++.++.|+
T Consensus 192 g~~VlV~GaG~vG~~a~qla~~-~Ga~~Vi~~~~~~~~~~~~~ 233 (374)
T 2jhf_A 192 GSTCAVFGLGGVGLSVIMGCKA-AGAARIIGVDINKDKFAKAK 233 (374)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH-TTCSEEEEECSCGGGHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHH-cCCCeEEEEcCCHHHHHHHH
Confidence 45888898754 4444455553 466 8999999999888875
No 410
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=41.58 E-value=38 Score=32.95 Aligned_cols=45 Identities=13% Similarity=0.004 Sum_probs=31.4
Q ss_pred CeEEEECCcccHHHHHHHHHhcCCeeEEecCcHHHHHHHHHHHHH
Q 015035 117 VKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKS 161 (414)
Q Consensus 117 ~~vLDIGtGsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~N~~~ 161 (414)
.+|.=||+|+=.-+++......++.|+..|+++++++.|.++++.
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~ 51 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRK 51 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHH
T ss_pred CeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHH
Confidence 578888876422222222234689999999999999988887754
No 411
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=41.55 E-value=56 Score=30.02 Aligned_cols=58 Identities=16% Similarity=0.046 Sum_probs=41.8
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
...+|=.|.+ |-|+..++..+ .+++|++++.+++.++.....++..+ .++.++..|..
T Consensus 28 ~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~ 87 (270)
T 3ftp_A 28 KQVAIVTGAS-RGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAG---LEGRGAVLNVN 87 (270)
T ss_dssp TCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHT---CCCEEEECCTT
T ss_pred CCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEEEeCC
Confidence 3467766754 55777777654 47899999999998887777776543 35778888864
No 412
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=41.38 E-value=59 Score=29.58 Aligned_cols=59 Identities=10% Similarity=-0.036 Sum_probs=43.4
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
..++|=.|.+ |.|+..++.++ .+++|+.+|.+++.++.+.+.++..+ ..++.++..|..
T Consensus 10 ~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dv~ 70 (262)
T 3pk0_A 10 GRSVVVTGGT-KGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLG--SGKVIGVQTDVS 70 (262)
T ss_dssp TCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTS--SSCEEEEECCTT
T ss_pred CCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhC--CCcEEEEEcCCC
Confidence 3567777755 55777777654 47899999999999887777766542 257888998865
No 413
>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*
Probab=41.27 E-value=25 Score=35.48 Aligned_cols=59 Identities=10% Similarity=-0.035 Sum_probs=37.3
Q ss_pred CCCeEEEECCcccHHHHH--HHHHhc--CCeeEEecCcHHH------------HHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 115 DKVKGFDIGTGANCIYPL--LGASLL--GWSFVGSDMTDVA------------LEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 115 ~~~~vLDIGtGsG~I~i~--La~~~~--~~~vvgvDis~~A------------l~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
.+.++|=.|.++| |+.. ++..+. +++|++++.+... .+.+++-++..+ .++..+..|..
T Consensus 59 ~gK~aLVTGassG-IG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g---~~~~~~~~Dvt 133 (418)
T 4eue_A 59 GPKKVLIVGASSG-FGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKG---LVAKNFIEDAF 133 (418)
T ss_dssp CCSEEEEESCSSH-HHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTT---CCEEEEESCTT
T ss_pred CCCEEEEECCCcH-HHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcC---CcEEEEEeeCC
Confidence 3457888898877 6666 666554 8999998875432 122333334443 35788888864
No 414
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=41.10 E-value=39 Score=31.24 Aligned_cols=59 Identities=12% Similarity=0.039 Sum_probs=42.9
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~ 178 (414)
..++|=.|.+ |-|+..++..+ .+++|+.+|.+++.++.+.+.+...+ .++.++..|..+
T Consensus 33 gk~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~ 93 (275)
T 4imr_A 33 GRTALVTGSS-RGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASG---GTAQELAGDLSE 93 (275)
T ss_dssp TCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTT---CCEEEEECCTTS
T ss_pred CCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC---CeEEEEEecCCC
Confidence 3567777755 45777777654 47899999999988877777766553 468888888653
No 415
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=40.96 E-value=87 Score=29.09 Aligned_cols=58 Identities=12% Similarity=0.000 Sum_probs=41.6
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
..++|=.|.+ |.|+..++..+ .+++|+++|.+++.++.+.+.++..+ .++.++..|..
T Consensus 34 ~k~vlVTGas-~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dv~ 93 (291)
T 3cxt_A 34 GKIALVTGAS-YGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAG---INAHGYVCDVT 93 (291)
T ss_dssp TCEEEEETCS-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT---CCCEEEECCTT
T ss_pred CCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CeEEEEEecCC
Confidence 3567877765 55777777654 47899999999988876666665443 35788888864
No 416
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=40.83 E-value=99 Score=28.40 Aligned_cols=59 Identities=8% Similarity=0.047 Sum_probs=42.0
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCCeeEEecC-cHHHHHHHHHHHHHCCCCCCcEEEEEccCCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDM-TDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDi-s~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~ 178 (414)
...+|=.|.++| |+..++..+ .+++|+.+|. +++.++...+.+...+ .++.++..|..+
T Consensus 29 ~k~~lVTGas~G-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~d 90 (280)
T 4da9_A 29 RPVAIVTGGRRG-IGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLG---ARVIFLRADLAD 90 (280)
T ss_dssp CCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTT---CCEEEEECCTTS
T ss_pred CCEEEEecCCCH-HHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcC---CcEEEEEecCCC
Confidence 356787886654 777776654 4789999996 7777776666666543 468899988653
No 417
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=40.49 E-value=33 Score=33.43 Aligned_cols=40 Identities=8% Similarity=-0.035 Sum_probs=30.1
Q ss_pred CeEEEECCcccHHHHH---HHHHhcCCeeEEecCcHHHHHHHHH
Q 015035 117 VKGFDIGTGANCIYPL---LGASLLGWSFVGSDMTDVALEWAEK 157 (414)
Q Consensus 117 ~~vLDIGtGsG~I~i~---La~~~~~~~vvgvDis~~Al~~A~~ 157 (414)
.+||=+|.|+|.++.+ +|+ ..+++|+++|.+++-++.|++
T Consensus 172 ~~vlV~gag~G~vG~~a~q~a~-~~Ga~Vi~~~~~~~~~~~~~~ 214 (379)
T 3iup_A 172 HSALVHTAAASNLGQMLNQICL-KDGIKLVNIVRKQEQADLLKA 214 (379)
T ss_dssp CSCEEESSTTSHHHHHHHHHHH-HHTCCEEEEESSHHHHHHHHH
T ss_pred CEEEEECCCCCHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHh
Confidence 5788887677666654 444 357899999999999988864
No 418
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=40.40 E-value=74 Score=29.17 Aligned_cols=60 Identities=13% Similarity=0.018 Sum_probs=42.0
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~ 178 (414)
..++|=.|.++| |+..++..+ .+++|+.+|.+.+.++.+...+... ...++.++..|..+
T Consensus 27 ~k~~lVTGas~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dv~~ 88 (277)
T 4fc7_A 27 DKVAFITGGGSG-IGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGA--TGRRCLPLSMDVRA 88 (277)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHH--HSSCEEEEECCTTC
T ss_pred CCEEEEeCCCch-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh--cCCcEEEEEcCCCC
Confidence 457888886654 777777654 4789999999988876665555432 12468889888653
No 419
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=40.10 E-value=25 Score=34.08 Aligned_cols=40 Identities=18% Similarity=0.121 Sum_probs=29.0
Q ss_pred CCeEEEECCcc-cHHHHHHHHHhcCC-eeEEecCcHHHHHHHH
Q 015035 116 KVKGFDIGTGA-NCIYPLLGASLLGW-SFVGSDMTDVALEWAE 156 (414)
Q Consensus 116 ~~~vLDIGtGs-G~I~i~La~~~~~~-~vvgvDis~~Al~~A~ 156 (414)
..+||=+|+|. |.+++.+|+. .++ +|+++|.+++.++.|+
T Consensus 194 g~~VlV~GaG~vG~~a~q~a~~-~Ga~~Vi~~~~~~~~~~~a~ 235 (378)
T 3uko_A 194 GSNVAIFGLGTVGLAVAEGAKT-AGASRIIGIDIDSKKYETAK 235 (378)
T ss_dssp TCCEEEECCSHHHHHHHHHHHH-HTCSCEEEECSCTTHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHH-cCCCeEEEEcCCHHHHHHHH
Confidence 35788888753 4455555553 466 8999999999988875
No 420
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=40.01 E-value=69 Score=29.52 Aligned_cols=59 Identities=14% Similarity=0.079 Sum_probs=38.3
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEE-EccCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIR-KVDNS 177 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~-~~d~~ 177 (414)
..+||=.|+ +|.|+..++..+ .+++|++++.++...+.....+... ...++.++ ..|..
T Consensus 11 ~~~vlVTGa-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~~D~~ 72 (342)
T 1y1p_A 11 GSLVLVTGA-NGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAK--YPGRFETAVVEDML 72 (342)
T ss_dssp TCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH--STTTEEEEECSCTT
T ss_pred CCEEEEECC-ccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhcc--CCCceEEEEecCCc
Confidence 357887764 478888877654 4789999999987665443333221 11457777 67754
No 421
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=39.66 E-value=31 Score=33.30 Aligned_cols=40 Identities=13% Similarity=0.021 Sum_probs=28.7
Q ss_pred CCeEEEECCcc-cHHHHHHHHHhcCC-eeEEecCcHHHHHHHH
Q 015035 116 KVKGFDIGTGA-NCIYPLLGASLLGW-SFVGSDMTDVALEWAE 156 (414)
Q Consensus 116 ~~~vLDIGtGs-G~I~i~La~~~~~~-~vvgvDis~~Al~~A~ 156 (414)
..+||-+|+|. |.+++.+|+. .++ +|+++|.+++.++.|+
T Consensus 196 g~~VlV~GaG~vG~~aiqlak~-~Ga~~Vi~~~~~~~~~~~a~ 237 (376)
T 1e3i_A 196 GSTCAVFGLGCVGLSAIIGCKI-AGASRIIAIDINGEKFPKAK 237 (376)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH-TTCSEEEEECSCGGGHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHH-cCCCeEEEEcCCHHHHHHHH
Confidence 45888898753 4444455553 467 8999999999888875
No 422
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=39.31 E-value=1.1e+02 Score=27.86 Aligned_cols=59 Identities=15% Similarity=0.008 Sum_probs=41.7
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCCeeEEecCc------------HHHHHHHHHHHHHCCCCCCcEEEEEccCCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMT------------DVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis------------~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~ 178 (414)
..++|=.|.++| |+..++..+ .+++|+.+|.+ .+.++.....++..+ .++.++..|..+
T Consensus 10 ~k~~lVTGas~g-IG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~ 82 (281)
T 3s55_A 10 GKTALITGGARG-MGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTG---RRCISAKVDVKD 82 (281)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTT---CCEEEEECCTTC
T ss_pred CCEEEEeCCCch-HHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcC---CeEEEEeCCCCC
Confidence 357888886654 777777654 47899999986 666666655555543 468888888653
No 423
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=39.25 E-value=65 Score=29.48 Aligned_cols=60 Identities=12% Similarity=-0.018 Sum_probs=41.5
Q ss_pred CeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 117 ~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
.++|=.|.+ |.|+..++..+ .+++|++++.+++.++.+.+.+...+....++.++..|..
T Consensus 7 k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~ 68 (280)
T 1xkq_A 7 KTVIITGSS-NGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVT 68 (280)
T ss_dssp CEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTT
T ss_pred CEEEEECCC-ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCC
Confidence 467777754 55777777654 4789999999998887766666543211226888888865
No 424
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=38.90 E-value=71 Score=28.71 Aligned_cols=56 Identities=20% Similarity=0.188 Sum_probs=40.0
Q ss_pred eEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 118 KGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 118 ~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
++|=.|.+ |.|+..++..+ .+++|++++.+++.++...+.++..+ .++.++..|..
T Consensus 4 ~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~ 61 (256)
T 1geg_A 4 VALVTGAG-QGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAG---GHAVAVKVDVS 61 (256)
T ss_dssp EEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTT
T ss_pred EEEEECCC-ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEEecCC
Confidence 56667754 55777777654 47899999999988776666665443 46888888864
No 425
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=38.88 E-value=48 Score=32.48 Aligned_cols=41 Identities=15% Similarity=0.059 Sum_probs=29.4
Q ss_pred CCeEEEECCcc-cHHHHHHHHHhcCC-eeEEecCcHHHHHHHHH
Q 015035 116 KVKGFDIGTGA-NCIYPLLGASLLGW-SFVGSDMTDVALEWAEK 157 (414)
Q Consensus 116 ~~~vLDIGtGs-G~I~i~La~~~~~~-~vvgvDis~~Al~~A~~ 157 (414)
..+||=+|+|. |.+++.+|+ ..++ +|+++|.+++-++.|++
T Consensus 214 g~~VlV~GaG~vG~~aiqlak-~~Ga~~Vi~~~~~~~~~~~~~~ 256 (404)
T 3ip1_A 214 GDNVVILGGGPIGLAAVAILK-HAGASKVILSEPSEVRRNLAKE 256 (404)
T ss_dssp TCEEEEECCSHHHHHHHHHHH-HTTCSEEEEECSCHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHH-HcCCCEEEEECCCHHHHHHHHH
Confidence 45788888753 344444555 4566 99999999999998864
No 426
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=38.72 E-value=97 Score=27.85 Aligned_cols=58 Identities=16% Similarity=0.029 Sum_probs=40.1
Q ss_pred CeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 117 ~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
.++|=.|.+ |.|+..++.++ .+++|++++.+++.++.+.+.+... ...++.++..|..
T Consensus 8 k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~D~~ 67 (263)
T 3ai3_A 8 KVAVITGSS-SGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEK--FGVRVLEVAVDVA 67 (263)
T ss_dssp CEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH--HCCCEEEEECCTT
T ss_pred CEEEEECCC-chHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHh--cCCceEEEEcCCC
Confidence 467777765 55777777654 4789999999998876655555432 0236888888864
No 427
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=38.59 E-value=90 Score=29.33 Aligned_cols=59 Identities=19% Similarity=0.119 Sum_probs=41.3
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCCeeEEecCc------------HHHHHHHHHHHHHCCCCCCcEEEEEccCCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMT------------DVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis------------~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~ 178 (414)
...+|=.|.++| |+..++..+ .+++|+++|.+ ++.++.+.+.++..+ .++.++..|..+
T Consensus 46 gk~~lVTGas~G-IG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~d 118 (317)
T 3oec_A 46 GKVAFITGAARG-QGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQG---RRIIARQADVRD 118 (317)
T ss_dssp TCEEEESSCSSH-HHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTT---CCEEEEECCTTC
T ss_pred CCEEEEeCCCcH-HHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcC---CeEEEEECCCCC
Confidence 356777776654 777777654 47899999986 677766666665543 468888888653
No 428
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=38.56 E-value=59 Score=29.69 Aligned_cols=60 Identities=15% Similarity=0.042 Sum_probs=42.5
Q ss_pred CCeEEEECCccc-HHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 116 KVKGFDIGTGAN-CIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 116 ~~~vLDIGtGsG-~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
.+.+|=-|.+++ -|+..+|+.+ .+++|+.+|.+++.++.+.+-++..+ ..++.+++.|..
T Consensus 6 gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~ 68 (256)
T 4fs3_A 6 NKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLN--QPEAHLYQIDVQ 68 (256)
T ss_dssp TCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGT--CSSCEEEECCTT
T ss_pred CCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CCcEEEEEccCC
Confidence 456777775442 3666666654 58999999999998888777776543 246788888865
No 429
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=38.11 E-value=96 Score=28.86 Aligned_cols=56 Identities=11% Similarity=0.043 Sum_probs=35.5
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
...+|=-|.++| |+..++.++ .+++|+.+|.+.. +.+.+-++..+ .++..+..|..
T Consensus 9 GKvalVTGas~G-IG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~g---~~~~~~~~Dv~ 66 (247)
T 4hp8_A 9 GRKALVTGANTG-LGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKDG---GNASALLIDFA 66 (247)
T ss_dssp TCEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHTT---CCEEEEECCTT
T ss_pred CCEEEEeCcCCH-HHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHhC---CcEEEEEccCC
Confidence 345666666655 777766654 5789999998743 22333344443 46788888864
No 430
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=37.63 E-value=97 Score=28.12 Aligned_cols=58 Identities=10% Similarity=0.050 Sum_probs=40.8
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCCeeEEecC-cHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDM-TDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDi-s~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
..++|=.|+++| |+..++.++ .+++|+.++. +++..+...+.++..+ .++.++..|..
T Consensus 29 ~k~vlITGas~g-IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~D~~ 89 (271)
T 4iin_A 29 GKNVLITGASKG-IGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKG---YKAAVIKFDAA 89 (271)
T ss_dssp CCEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT---CCEEEEECCTT
T ss_pred CCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC---CceEEEECCCC
Confidence 356777776655 777777654 4789999998 6666666666665553 46888988865
No 431
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=36.79 E-value=81 Score=28.33 Aligned_cols=57 Identities=9% Similarity=-0.025 Sum_probs=40.6
Q ss_pred CeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 117 ~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
.++|=.|. +|.|+..++..+ .+++|++++.+++.++.+.+.++..+ .++.++..|..
T Consensus 15 k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~D~~ 73 (260)
T 2zat_A 15 KVALVTAS-TDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEG---LSVTGTVCHVG 73 (260)
T ss_dssp CEEEESSC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTT
T ss_pred CEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CceEEEEccCC
Confidence 46776775 455787777654 47899999999988776666665543 36788888864
No 432
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=35.99 E-value=51 Score=31.39 Aligned_cols=41 Identities=20% Similarity=0.142 Sum_probs=29.3
Q ss_pred CCeEEEECCcc-cHHHHHHHHHhcCC-eeEEecCcHHHHHHHHH
Q 015035 116 KVKGFDIGTGA-NCIYPLLGASLLGW-SFVGSDMTDVALEWAEK 157 (414)
Q Consensus 116 ~~~vLDIGtGs-G~I~i~La~~~~~~-~vvgvDis~~Al~~A~~ 157 (414)
..+||-+|+|. |..++.+++ ..++ +|+++|.+++.++.|++
T Consensus 168 g~~VlV~GaG~vG~~~~q~a~-~~Ga~~Vi~~~~~~~~~~~~~~ 210 (348)
T 2d8a_A 168 GKSVLITGAGPLGLLGIAVAK-ASGAYPVIVSEPSDFRRELAKK 210 (348)
T ss_dssp TCCEEEECCSHHHHHHHHHHH-HTTCCSEEEECSCHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHH-HcCCCEEEEECCCHHHHHHHHH
Confidence 35799999843 334444554 3477 99999999998888764
No 433
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=35.98 E-value=1e+02 Score=27.27 Aligned_cols=58 Identities=17% Similarity=0.014 Sum_probs=41.7
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
..++|=.|++ |.|+..++.++ .+++|+.++.++..++.+.+.++..+ ..++.++..|.
T Consensus 14 ~k~vlITGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~d~ 73 (247)
T 3i1j_A 14 GRVILVTGAA-RGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAG--QPQPLIIALNL 73 (247)
T ss_dssp TCEEEESSTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--SCCCEEEECCT
T ss_pred CCEEEEeCCC-ChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcC--CCCceEEEecc
Confidence 3567777765 55777777654 47899999999999988877776653 23566777664
No 434
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=35.80 E-value=83 Score=29.30 Aligned_cols=60 Identities=15% Similarity=0.020 Sum_probs=41.9
Q ss_pred CeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 117 ~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
.++|=.|.+ |.|+..++..+ .+++|++++.+++.++.+.+.+...+....++.++..|..
T Consensus 27 k~vlVTGas-~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~ 88 (297)
T 1xhl_A 27 KSVIITGSS-NGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVT 88 (297)
T ss_dssp CEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTT
T ss_pred CEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCC
Confidence 467777754 55787777654 4789999999998887766666554311226888888864
No 435
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=35.68 E-value=27 Score=31.68 Aligned_cols=52 Identities=10% Similarity=0.121 Sum_probs=34.0
Q ss_pred EEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 119 GFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 119 vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
+|=.|. +|.|+..++..+ .+++|++++.+++.++...+.+ ..++.++..|..
T Consensus 3 vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~Dv~ 56 (248)
T 3asu_A 3 VLVTGA-TAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL------GDNLYIAQLDVR 56 (248)
T ss_dssp EEETTT-TSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH------CTTEEEEECCTT
T ss_pred EEEECC-CChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh------cCceEEEEcCCC
Confidence 444454 345776666654 4789999999988776544333 135788888864
No 436
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=35.06 E-value=89 Score=27.98 Aligned_cols=57 Identities=11% Similarity=-0.026 Sum_probs=41.1
Q ss_pred CeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 117 ~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
.++|=.|. +|.|+..++..+ .+++|++++.+++.++.....++..+ .++.++..|..
T Consensus 15 k~vlITGa-sggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~ 73 (266)
T 1xq1_A 15 KTVLVTGG-TKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKG---FQVTGSVCDAS 73 (266)
T ss_dssp CEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTT
T ss_pred CEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CeeEEEECCCC
Confidence 46776665 556887777654 47899999999988776666665543 36888888864
No 437
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=34.60 E-value=45 Score=28.74 Aligned_cols=40 Identities=8% Similarity=-0.055 Sum_probs=26.5
Q ss_pred CCeEEEECCcccHHHHHHHH--HhcCCeeEEecCcHHHHHHHH
Q 015035 116 KVKGFDIGTGANCIYPLLGA--SLLGWSFVGSDMTDVALEWAE 156 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~--~~~~~~vvgvDis~~Al~~A~ 156 (414)
..+||.+|++ |.|+..+++ +..+++|+++|.+++.++.++
T Consensus 39 g~~vlV~Ga~-ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~ 80 (198)
T 1pqw_A 39 GERVLIHSAT-GGVGMAAVSIAKMIGARIYTTAGSDAKREMLS 80 (198)
T ss_dssp TCEEEETTTT-SHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH
T ss_pred CCEEEEeeCC-ChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 4589999843 234433332 234789999999998877664
No 438
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=34.21 E-value=95 Score=28.11 Aligned_cols=60 Identities=12% Similarity=-0.007 Sum_probs=40.7
Q ss_pred CeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 117 ~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
.++|=.|.+ |.|+..++..+ .+++|++++.+++.++.+.+.+........++.++..|..
T Consensus 7 k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 68 (278)
T 1spx_A 7 KVAIITGSS-NGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVT 68 (278)
T ss_dssp CEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTT
T ss_pred CEEEEeCCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccC
Confidence 456766654 55777777654 4789999999998887666555321112346888888864
No 439
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=33.99 E-value=1.3e+02 Score=27.42 Aligned_cols=58 Identities=14% Similarity=-0.035 Sum_probs=40.2
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHH-HHCCCCCCcEEEEEccCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNV-KSNPHISELIEIRKVDNS 177 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~-~~n~~l~~rI~~~~~d~~ 177 (414)
...+|=.|.+ |.|+..++..+ .+++|++++.+++.++.+.+.+ +..+ .++.++..|..
T Consensus 21 ~k~~lVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~---~~~~~~~~Dl~ 81 (267)
T 1vl8_A 21 GRVALVTGGS-RGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYG---VETMAFRCDVS 81 (267)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC---CCEEEEECCTT
T ss_pred CCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC---CeEEEEEcCCC
Confidence 3567877765 55777777654 4789999999998877665555 3222 35788888864
No 440
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=33.93 E-value=59 Score=30.88 Aligned_cols=41 Identities=12% Similarity=0.135 Sum_probs=30.6
Q ss_pred CCeEEEECC--cccHHHHHHHHHhcCCeeEEecCcHHHHHHHHH
Q 015035 116 KVKGFDIGT--GANCIYPLLGASLLGWSFVGSDMTDVALEWAEK 157 (414)
Q Consensus 116 ~~~vLDIGt--GsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~ 157 (414)
..++|-+|+ |.|...+.+++ ..+++|+++|.+++.++.+++
T Consensus 167 g~~vlV~Gasg~iG~~~~~~a~-~~G~~Vi~~~~~~~~~~~~~~ 209 (343)
T 2eih_A 167 GDDVLVMAAGSGVSVAAIQIAK-LFGARVIATAGSEDKLRRAKA 209 (343)
T ss_dssp TCEEEECSTTSTTHHHHHHHHH-HTTCEEEEEESSHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHh
Confidence 468999998 44555555555 357899999999999888864
No 441
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=33.88 E-value=64 Score=29.81 Aligned_cols=60 Identities=15% Similarity=0.160 Sum_probs=41.7
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~ 178 (414)
..++|=.|.+ |.|+..++.++ .+++|+.+|.+++.++.+.+.+...+ ...+.++..|..+
T Consensus 33 gk~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d 94 (281)
T 4dry_A 33 GRIALVTGGG-TGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRT--GNIVRAVVCDVGD 94 (281)
T ss_dssp -CEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH--SSCEEEEECCTTC
T ss_pred CCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CCeEEEEEcCCCC
Confidence 3467766755 55887777764 47899999999998877766665432 2346888888653
No 442
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=33.67 E-value=97 Score=27.69 Aligned_cols=57 Identities=19% Similarity=-0.008 Sum_probs=40.7
Q ss_pred CeEEEECCcccHHHHHHHHHh--cCCeeEEecC-cHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDM-TDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 117 ~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDi-s~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
.++|=.|. +|.|+..++..+ .+++|++++. ++..++...+.++..+ .++.++..|..
T Consensus 22 k~vlItGa-sggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~---~~~~~~~~D~~ 81 (274)
T 1ja9_A 22 KVALTTGA-GRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLG---AQGVAIQADIS 81 (274)
T ss_dssp CEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT---CCEEEEECCTT
T ss_pred CEEEEeCC-CchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcC---CcEEEEEecCC
Confidence 46776664 567888877754 4789999998 8877766655555443 46888888864
No 443
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=33.62 E-value=92 Score=27.97 Aligned_cols=58 Identities=9% Similarity=-0.009 Sum_probs=41.4
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
...+|=.|.+ |.|+..++.++ .+++|+.+|.+++.++.+.+.+...+ ..++.++..|.
T Consensus 12 ~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~ 71 (252)
T 3f1l_A 12 DRIILVTGAS-DGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEET--GRQPQWFILDL 71 (252)
T ss_dssp TCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH--SCCCEEEECCT
T ss_pred CCEEEEeCCC-ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc--CCCceEEEEec
Confidence 3567777865 45777777654 47899999999998877766665432 23577888886
No 444
>3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis}
Probab=33.58 E-value=84 Score=34.26 Aligned_cols=94 Identities=14% Similarity=0.038 Sum_probs=52.0
Q ss_pred ceeeCCChHhHHHHHHHH--hhhcCCcE-EEecCCCeeCC------CCCcH-----hHHHHHHHHHccCCCCCCCCCCCC
Q 015035 51 PRIDWTDFNATRELTRVL--LLHDHGLN-WWIPDGQLCPT------VPNRS-----NYIHWIEDLLSSNIIPTTSRNGDK 116 (414)
Q Consensus 51 ~~iDf~~~~a~r~Lt~~L--L~~~fgl~-~~vp~gvLiPr------iP~R~-----~yi~~i~dll~~~~~~~~~~~~~~ 116 (414)
.-+||++|++...+...+ +...||++ |+++-+.-+.. .|++. +|+.-+.+++.... ..-+
T Consensus 447 ~vLD~tnPevr~~i~~~l~~ll~~~GIDy~K~D~nr~i~~~~~~~~~~~~q~~~~~~y~~g~y~ll~~l~------~~~P 520 (745)
T 3mi6_A 447 FVLDMARPEVVDYLFKLMSQMIESANLDYIKWDMNRYATEMFSSRLTSDQQLELPHRYILGVYQLYARLT------QAYP 520 (745)
T ss_dssp EEBCTTCHHHHHHHHHHHHHHHHHHTCSEEEECCCSCCCSCCCSSSCGGGGGGHHHHHHHHHHHHHHHHH------HHCT
T ss_pred EEECCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCcccCCCcCccccccHHHHHHHHHHHHHHHHHH------hhCC
Confidence 459999999999998887 45678886 55655443321 12221 34433333332210 0123
Q ss_pred CeEEEECCcccH-HHHHHHHHhcCCeeEEecCcHHHHH
Q 015035 117 VKGFDIGTGANC-IYPLLGASLLGWSFVGSDMTDVALE 153 (414)
Q Consensus 117 ~~vLDIGtGsG~-I~i~La~~~~~~~vvgvDis~~Al~ 153 (414)
..+++-|+|-|. +=..+....+ ++-+.|-+. |++
T Consensus 521 ~v~ie~CssGGgR~D~g~L~~~~--~~W~SD~tD-a~e 555 (745)
T 3mi6_A 521 NVLFESCASGGGRFDLGMMYYAP--QAWTSDDTD-AAE 555 (745)
T ss_dssp TCEEEECSTTTSSCSHHHHHHSS--EEECCSCCC-HHH
T ss_pred CeEEEecCCCCCccChhHHhcCC--ccccCCCCC-HHH
Confidence 467888877665 4333444444 556677543 443
No 445
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=33.34 E-value=1.3e+02 Score=27.69 Aligned_cols=59 Identities=14% Similarity=0.071 Sum_probs=41.3
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCCeeEEecC-cHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDM-TDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDi-s~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
..++|=.|.++| |+..++.++ .+++|+.+|. +++.++...+.++.. ...++.++..|..
T Consensus 25 ~k~~lVTGas~G-IG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~Dv~ 86 (281)
T 3v2h_A 25 TKTAVITGSTSG-IGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGL--SSGTVLHHPADMT 86 (281)
T ss_dssp TCEEEEETCSSH-HHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTT--CSSCEEEECCCTT
T ss_pred CCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhc--cCCcEEEEeCCCC
Confidence 357888886654 777777654 4789999998 777776666555543 1357888888864
No 446
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=33.27 E-value=1.1e+02 Score=27.75 Aligned_cols=59 Identities=14% Similarity=-0.006 Sum_probs=41.5
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCCeeEEe-cCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGS-DMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~~vvgv-Dis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~ 178 (414)
..++|=.|.++| |+..++.++ .+++|+.+ +.+++.++.+.+.++..+ .++.++..|..+
T Consensus 8 ~k~vlVTGas~G-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~ 69 (259)
T 3edm_A 8 NRTIVVAGAGRD-IGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLG---RSALAIKADLTN 69 (259)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTT---SCCEEEECCTTC
T ss_pred CCEEEEECCCch-HHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC---CceEEEEcCCCC
Confidence 357888886655 777776654 47899988 777777776666665443 468888888653
No 447
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=33.06 E-value=1e+02 Score=27.42 Aligned_cols=57 Identities=12% Similarity=0.007 Sum_probs=39.8
Q ss_pred CeEEEECCcccHHHHHHHHHh--cCCeeEEecC-cHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDM-TDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 117 ~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDi-s~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
.++|=.|.+ |.|+..++..+ .+++|++++. +++.++.+.+.++..+ .++.++..|..
T Consensus 5 k~vlVTGas-~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~D~~ 64 (246)
T 2uvd_A 5 KVALVTGAS-RGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLG---SDAIAVRADVA 64 (246)
T ss_dssp CEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT---CCEEEEECCTT
T ss_pred CEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC---CcEEEEEcCCC
Confidence 456666644 56787777654 4789999999 8887776666555442 46888888864
No 448
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=32.96 E-value=1.2e+02 Score=27.53 Aligned_cols=59 Identities=14% Similarity=-0.013 Sum_probs=41.0
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCCeeEEecC-cHHHHHHHHHHHHHCCCCCCcEEEEEccCCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDM-TDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDi-s~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~ 178 (414)
...+|=.|.+ |.|+..++..+ .+++|+.++. ++..++...+.++..+ .++.++..|..+
T Consensus 28 ~k~vlVTGas-~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~D~~d 89 (269)
T 4dmm_A 28 DRIALVTGAS-RGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAG---GEAFAVKADVSQ 89 (269)
T ss_dssp TCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT---CCEEEEECCTTS
T ss_pred CCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcC---CcEEEEECCCCC
Confidence 3467777755 45777777654 4789999988 7777776666665543 468888888653
No 449
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=32.64 E-value=1.3e+02 Score=27.04 Aligned_cols=55 Identities=11% Similarity=0.030 Sum_probs=39.7
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
..++|=.|.++| |+..++.++ .+++|+.+|.+++.++...+.. ..++.++..|..
T Consensus 8 gk~~lVTGas~g-IG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~Dv~ 64 (255)
T 4eso_A 8 GKKAIVIGGTHG-MGLATVRRLVEGGAEVLLTGRNESNIARIREEF------GPRVHALRSDIA 64 (255)
T ss_dssp TCEEEEETCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH------GGGEEEEECCTT
T ss_pred CCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh------CCcceEEEccCC
Confidence 357888886655 777777654 4789999999998876554443 246888888865
No 450
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=31.84 E-value=1e+02 Score=27.42 Aligned_cols=57 Identities=9% Similarity=-0.122 Sum_probs=40.1
Q ss_pred CeEEEECCcccHHHHHHHHHh--cCCeeEEecC-cHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDM-TDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 117 ~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDi-s~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
.++|=.|. +|.|+..++.++ .+++|++++. ++..++...+.++..+ .++.++..|..
T Consensus 8 k~vlITGa-sggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~---~~~~~~~~D~~ 67 (261)
T 1gee_A 8 KVVVITGS-STGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVG---GEAIAVKGDVT 67 (261)
T ss_dssp CEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT---CEEEEEECCTT
T ss_pred CEEEEeCC-CChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcC---CceEEEECCCC
Confidence 46776664 566887777654 4789999999 8877766666665442 46888888864
No 451
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=31.82 E-value=71 Score=30.13 Aligned_cols=42 Identities=19% Similarity=0.125 Sum_probs=28.5
Q ss_pred CCeEEEECCcccH-HHHHHHHHhcCCeeEEecCcHHHHHHHHH
Q 015035 116 KVKGFDIGTGANC-IYPLLGASLLGWSFVGSDMTDVALEWAEK 157 (414)
Q Consensus 116 ~~~vLDIGtGsG~-I~i~La~~~~~~~vvgvDis~~Al~~A~~ 157 (414)
..+||=+|+|... +++.+|+..-...++++|.+++-++.|++
T Consensus 161 g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~ 203 (346)
T 4a2c_A 161 NKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKS 203 (346)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH
T ss_pred CCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHH
Confidence 4578888886533 34445554434467899999998888764
No 452
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=31.52 E-value=1.4e+02 Score=26.86 Aligned_cols=58 Identities=10% Similarity=0.048 Sum_probs=41.0
Q ss_pred CeEEEECCcccHHHHHHHHHh--cCCeeEEe-cCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCC
Q 015035 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGS-DMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (414)
Q Consensus 117 ~~vLDIGtGsG~I~i~La~~~--~~~~vvgv-Dis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~ 178 (414)
.++|=.|.+ |.|+..++.++ .+++|+.+ +.+++.++.+.+-++..+ .++.++..|..+
T Consensus 5 k~vlVTGas-~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~ 65 (258)
T 3oid_A 5 KCALVTGSS-RGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLG---VKVLVVKANVGQ 65 (258)
T ss_dssp CEEEESSCS-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTT---CCEEEEECCTTC
T ss_pred CEEEEecCC-chHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC---CcEEEEEcCCCC
Confidence 466766755 55787777654 47898886 889888877766665443 468889888653
No 453
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=31.41 E-value=11 Score=36.20 Aligned_cols=49 Identities=14% Similarity=0.133 Sum_probs=29.2
Q ss_pred CCcHhHH-HHHHHHHccCCCCCCCCCCCCCeEEEECCcccHHHHHHHHH--hc--CCeeEEec
Q 015035 89 PNRSNYI-HWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGAS--LL--GWSFVGSD 146 (414)
Q Consensus 89 P~R~~yi-~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~i~La~~--~~--~~~vvgvD 146 (414)
+.|..|= .||.+- ..+ ....+||||||+.|.=+-.++.+ .. ...++|+|
T Consensus 55 RSRAayKL~EIdeK---~li------kpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D 108 (269)
T 2px2_A 55 VSRGTAKLRWLVER---RFV------QPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGP 108 (269)
T ss_dssp SSTHHHHHHHHHHT---TSC------CCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCST
T ss_pred ccHHHHHHHHHHHc---CCC------CCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccc
Confidence 5687773 344333 212 23469999999999877665553 11 12456666
No 454
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=31.25 E-value=1.1e+02 Score=28.03 Aligned_cols=57 Identities=16% Similarity=-0.041 Sum_probs=41.2
Q ss_pred CeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 117 ~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
.++|=.|.+ |.|+..++..+ .+++|++++.+++.++.+.+.++.. ..++.++..|..
T Consensus 45 k~vlITGas-ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dl~ 103 (285)
T 2c07_A 45 KVALVTGAG-RGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF---GYESSGYAGDVS 103 (285)
T ss_dssp CEEEEESTT-SHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTT---TCCEEEEECCTT
T ss_pred CEEEEECCC-cHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc---CCceeEEECCCC
Confidence 567877755 66888887765 3689999999988877666655543 246888888864
No 455
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=30.89 E-value=71 Score=30.03 Aligned_cols=39 Identities=15% Similarity=0.240 Sum_probs=27.2
Q ss_pred CCeEEEECCcccHHHHHHHH--HhcCCeeEEecCcHHHHHHH
Q 015035 116 KVKGFDIGTGANCIYPLLGA--SLLGWSFVGSDMTDVALEWA 155 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~--~~~~~~vvgvDis~~Al~~A 155 (414)
..++|-.|++. .|+..+++ +..+++|+++|.+++.++.+
T Consensus 146 g~~vlV~Ga~g-giG~~~~~~~~~~G~~V~~~~~~~~~~~~~ 186 (333)
T 1v3u_A 146 GETVLVSAAAG-AVGSVVGQIAKLKGCKVVGAAGSDEKIAYL 186 (333)
T ss_dssp SCEEEEESTTB-HHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred CCEEEEecCCC-cHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 46899999732 34433332 23578999999999888777
No 456
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=30.85 E-value=1e+02 Score=27.08 Aligned_cols=56 Identities=18% Similarity=0.093 Sum_probs=39.6
Q ss_pred eEEEECCcccHHHHHHHHHh--cCC-------eeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 118 KGFDIGTGANCIYPLLGASL--LGW-------SFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 118 ~vLDIGtGsG~I~i~La~~~--~~~-------~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
++|=.|. +|.|+..++..+ .++ +|++++.++..++...+.+... ..++.++..|..
T Consensus 4 ~vlITGa-sggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~ 68 (244)
T 2bd0_A 4 ILLITGA-GKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE---GALTDTITADIS 68 (244)
T ss_dssp EEEEETT-TSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTT---TCEEEEEECCTT
T ss_pred EEEEECC-CChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHcc---CCeeeEEEecCC
Confidence 5666664 466887777654 366 8999999998887666655543 246888888864
No 457
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=30.83 E-value=1.1e+02 Score=24.98 Aligned_cols=50 Identities=14% Similarity=0.140 Sum_probs=35.1
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
..+++=+|+| -++..++..+ .+++|+++|.+++.++.+++ .+ +.++.+|.
T Consensus 7 ~~~viIiG~G--~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~----~g-----~~~i~gd~ 58 (140)
T 3fwz_A 7 CNHALLVGYG--RVGSLLGEKLLASDIPLVVIETSRTRVDELRE----RG-----VRAVLGNA 58 (140)
T ss_dssp CSCEEEECCS--HHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----TT-----CEEEESCT
T ss_pred CCCEEEECcC--HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----cC-----CCEEECCC
Confidence 3578888774 5666666654 47899999999998876653 33 45677764
No 458
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=30.54 E-value=1.1e+02 Score=27.42 Aligned_cols=60 Identities=12% Similarity=-0.062 Sum_probs=40.8
Q ss_pred CCeEEEECCc--ccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCC
Q 015035 116 KVKGFDIGTG--ANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (414)
Q Consensus 116 ~~~vLDIGtG--sG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~ 178 (414)
..++|=.|.+ +| |+..++..+ .+++|+.++.++...+.+++-.+..+ ..++.++..|..+
T Consensus 7 ~k~vlVTGasg~~G-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~ 70 (266)
T 3oig_A 7 GRNIVVMGVANKRS-IAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLD--RNDSIILPCDVTN 70 (266)
T ss_dssp TCEEEEECCCSTTS-HHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSS--SCCCEEEECCCSS
T ss_pred CCEEEEEcCCCCCc-HHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcC--CCCceEEeCCCCC
Confidence 3567878865 34 666666554 47899999998776666666555443 2368889988653
No 459
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=30.17 E-value=1.8e+02 Score=26.09 Aligned_cols=55 Identities=11% Similarity=0.034 Sum_probs=38.9
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
..++|=.|.+ |.|+..++.++ .+++|+.+|.+++.++.+...+ ..++.++..|..
T Consensus 8 ~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~D~~ 64 (259)
T 4e6p_A 8 GKSALITGSA-RGIGRAFAEAYVREGATVAIADIDIERARQAAAEI------GPAAYAVQMDVT 64 (259)
T ss_dssp TCEEEEETCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH------CTTEEEEECCTT
T ss_pred CCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh------CCCceEEEeeCC
Confidence 3578888855 55777777654 4789999999988776554433 235788888865
No 460
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=29.99 E-value=1.5e+02 Score=26.53 Aligned_cols=57 Identities=18% Similarity=0.106 Sum_probs=39.0
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
..++|=.|. +|.|+..++.++ .+++|++++.++..++...+.+. -..++.++..|..
T Consensus 16 ~k~vlITGa-sggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~~D~~ 74 (278)
T 2bgk_A 16 DKVAIITGG-AGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIG----SPDVISFVHCDVT 74 (278)
T ss_dssp TCEEEEEST-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC----CTTTEEEEECCTT
T ss_pred CCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhC----CCCceEEEECCCC
Confidence 357888886 466887777654 47899999999877654433331 1236888888865
No 461
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=29.73 E-value=1.4e+02 Score=28.46 Aligned_cols=58 Identities=10% Similarity=-0.011 Sum_probs=42.1
Q ss_pred CeEEEECCcccHHHHHHHHHhc-CCeeEEecCcHHHHHHHHHHHHHCCC-CCCcEEEEEccCC
Q 015035 117 VKGFDIGTGANCIYPLLGASLL-GWSFVGSDMTDVALEWAEKNVKSNPH-ISELIEIRKVDNS 177 (414)
Q Consensus 117 ~~vLDIGtGsG~I~i~La~~~~-~~~vvgvDis~~Al~~A~~N~~~n~~-l~~rI~~~~~d~~ 177 (414)
..||+||||-=.-+-.|. .+ +.+++=+| .|+.++..++-+...+. -.++..++.+|..
T Consensus 104 ~QvV~LGaGlDTra~Rl~--~~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~ 163 (310)
T 2uyo_A 104 RQFVILASGLDSRAYRLD--WPTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLR 163 (310)
T ss_dssp CEEEEETCTTCCHHHHSC--CCTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTT
T ss_pred CeEEEeCCCCCchhhhcc--CCCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchH
Confidence 479999999776644333 13 47888899 69999999999876531 1356788888865
No 462
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=29.63 E-value=1e+02 Score=29.20 Aligned_cols=56 Identities=5% Similarity=-0.066 Sum_probs=38.3
Q ss_pred CCeEEEECCcccHHHHHHHHHh--c-CC-eeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--L-GW-SFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~-~~-~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
..+||=.| |+|.|+..++..+ . ++ +|++++.++.......+.+. ..++.++.+|..
T Consensus 21 ~k~vlVTG-atG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~-----~~~v~~~~~Dl~ 80 (344)
T 2gn4_A 21 NQTILITG-GTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN-----DPRMRFFIGDVR 80 (344)
T ss_dssp TCEEEEET-TTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC-----CTTEEEEECCTT
T ss_pred CCEEEEEC-CCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc-----CCCEEEEECCCC
Confidence 35787766 4578888877654 2 66 99999999877654443332 136888888864
No 463
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=29.61 E-value=91 Score=27.40 Aligned_cols=58 Identities=7% Similarity=0.013 Sum_probs=39.9
Q ss_pred CeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 117 ~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
.++|=.|. +|.|+..++.++ .+++|++++.++..++...+.+... ...++.++..|..
T Consensus 8 ~~vlVtGa-sggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~ 67 (248)
T 2pnf_A 8 KVSLVTGS-TRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANK--YGVKAHGVEMNLL 67 (248)
T ss_dssp CEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH--HCCCEEEEECCTT
T ss_pred CEEEEECC-CchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhh--cCCceEEEEccCC
Confidence 46776665 566887777654 4789999999998877665555431 1135888888864
No 464
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=29.55 E-value=61 Score=30.31 Aligned_cols=60 Identities=10% Similarity=-0.031 Sum_probs=42.6
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~ 178 (414)
..++|=.|.+ |-|+..++..+ .+++|+.+|.+++.++.+.+.+...+ ..++.++..|..+
T Consensus 41 ~k~vlVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dv~d 102 (293)
T 3rih_A 41 ARSVLVTGGT-KGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELG--AGNVIGVRLDVSD 102 (293)
T ss_dssp TCEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSS--SSCEEEEECCTTC
T ss_pred CCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhC--CCcEEEEEEeCCC
Confidence 3467777755 45777777654 47899999999988877766665442 2478888988653
No 465
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=29.50 E-value=1e+02 Score=27.92 Aligned_cols=58 Identities=16% Similarity=0.048 Sum_probs=40.0
Q ss_pred CeEEEECCcccHHHHHHHHHh--cCCeeEEecC-cHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDM-TDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 117 ~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDi-s~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
.++|=.|.+ |.|+..++..+ .+++|++++. +++.++.+.+.++... ..++.++..|..
T Consensus 12 k~~lVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~ 72 (276)
T 1mxh_A 12 PAAVITGGA-RRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAAR--AGSAVLCKGDLS 72 (276)
T ss_dssp CEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS--TTCEEEEECCCS
T ss_pred CEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhc--CCceEEEeccCC
Confidence 457766655 55887777654 4789999999 8887776655554320 246888888865
No 466
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=29.33 E-value=1.3e+02 Score=27.73 Aligned_cols=55 Identities=22% Similarity=0.152 Sum_probs=38.4
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
..++|=.|.++| |+..++.++ .+++|+.+|.+++.++.+.+.+ + .++.++..|..
T Consensus 29 gk~vlVTGas~g-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~---~~~~~~~~Dv~ 85 (277)
T 3gvc_A 29 GKVAIVTGAGAG-IGLAVARRLADEGCHVLCADIDGDAADAAATKI---G---CGAAACRVDVS 85 (277)
T ss_dssp TCEEEETTTTST-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---C---SSCEEEECCTT
T ss_pred CCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---C---CcceEEEecCC
Confidence 346777776544 777776654 4789999999998876655443 2 35788888865
No 467
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=29.16 E-value=1.1e+02 Score=28.01 Aligned_cols=57 Identities=12% Similarity=-0.023 Sum_probs=39.3
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
..++|=.|.+ |.|+..++..+ .+++|+++|.+++.++...+.+... .++.++..|..
T Consensus 29 ~k~vlVTGas-~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~Dv~ 87 (276)
T 2b4q_A 29 GRIALVTGGS-RGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAY----GDCQAIPADLS 87 (276)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTS----SCEEECCCCTT
T ss_pred CCEEEEeCCC-ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----CceEEEEeeCC
Confidence 3567877765 55777777654 4789999999998876555554322 25777777754
No 468
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=29.05 E-value=45 Score=30.28 Aligned_cols=57 Identities=11% Similarity=-0.062 Sum_probs=33.9
Q ss_pred CeEEEECCcc-cHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 117 VKGFDIGTGA-NCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 117 ~~vLDIGtGs-G~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
.++|=.|.++ |.|+..++..+ .+++|+.++.++...+.+++-.+..+ .+.++..|..
T Consensus 10 k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~----~~~~~~~D~~ 69 (265)
T 1qsg_A 10 KRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLG----SDIVLQCDVA 69 (265)
T ss_dssp CEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTT----CCCEEECCTT
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcC----CcEEEEccCC
Confidence 4677777652 67888877754 47899999998722222222222222 2356777754
No 469
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=29.04 E-value=1.8e+02 Score=25.93 Aligned_cols=59 Identities=14% Similarity=-0.054 Sum_probs=40.2
Q ss_pred CeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 117 ~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
.++|=.|.+ |.|+..++..+ .+++|++++.+++.++.+.+.+.... -..++.++..|..
T Consensus 8 k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~ 68 (260)
T 2z1n_A 8 KLAVVTAGS-SGLGFASALELARNGARLLLFSRNREKLEAAASRIASLV-SGAQVDIVAGDIR 68 (260)
T ss_dssp CEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHS-TTCCEEEEECCTT
T ss_pred CEEEEECCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CCCeEEEEEccCC
Confidence 467877765 55777777654 47899999999988776655554320 0126888888864
No 470
>1wey_A Calcipressin 1; structural genomics, RRM domain, riken structural genomics/proteomics initiative, RSGI, RNA binding protein; NMR {Mus musculus} SCOP: d.58.7.1
Probab=28.96 E-value=37 Score=27.92 Aligned_cols=42 Identities=21% Similarity=0.293 Sum_probs=32.3
Q ss_pred CHHHHHhhCCCcccceeecCCCCceeeCCChHhHHHHHHHHhh
Q 015035 28 DFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLL 70 (414)
Q Consensus 28 dF~~La~~yp~~~~~v~~~~~g~~~iDf~~~~a~r~Lt~~LL~ 70 (414)
.|.+|-..|.+...|.....-.|..|+|+++++.. -.|..|.
T Consensus 26 ~~e~Lf~~~~~~~tF~~lkSFRRirv~F~~~~~A~-~AR~~Lh 67 (104)
T 1wey_A 26 KFESLFRTYDKDTTFQYFKSFKRVRINFSNPLSAA-DARLRLH 67 (104)
T ss_dssp HHHHHHHTTCSSCEEEEETTTTEEEEECSSTTHHH-HHHHTST
T ss_pred HHHHHHHhhCcCcceeecCcceEEEEEeCChHHHH-HHHHHhc
Confidence 46888889988888887777889999999988753 3454443
No 471
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=28.95 E-value=93 Score=27.96 Aligned_cols=57 Identities=12% Similarity=0.080 Sum_probs=38.6
Q ss_pred CeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHH--HHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVA--LEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 117 ~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~A--l~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
..+|=.|.+ |.|+..++..+ .+++|++++.+++. ++...+.++.. ..++.++..|..
T Consensus 3 k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~ 63 (258)
T 3a28_C 3 KVAMVTGGA-QGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAA---DQKAVFVGLDVT 63 (258)
T ss_dssp CEEEEETTT-SHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTT---TCCEEEEECCTT
T ss_pred CEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhc---CCcEEEEEccCC
Confidence 356777755 55777776654 47899999998876 65555555433 246888888864
No 472
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=28.93 E-value=1.3e+02 Score=26.97 Aligned_cols=55 Identities=18% Similarity=0.127 Sum_probs=38.7
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
..++|=.|.++| |+..++..+ .+++|+.+|.+++.++.+...+ + .++.++..|..
T Consensus 6 gk~vlVTGas~g-IG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~---~~~~~~~~Dv~ 62 (247)
T 3rwb_A 6 GKTALVTGAAQG-IGKAIAARLAADGATVIVSDINAEGAKAAAASI---G---KKARAIAADIS 62 (247)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---C---TTEEECCCCTT
T ss_pred CCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---C---CceEEEEcCCC
Confidence 357888886654 777776654 4789999999998876554433 2 35788888764
No 473
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=28.53 E-value=59 Score=30.94 Aligned_cols=41 Identities=12% Similarity=0.025 Sum_probs=28.4
Q ss_pred CCeEEEECCc--ccHHHHHHHHHhcCCeeEEecCcHHHHHHHHH
Q 015035 116 KVKGFDIGTG--ANCIYPLLGASLLGWSFVGSDMTDVALEWAEK 157 (414)
Q Consensus 116 ~~~vLDIGtG--sG~I~i~La~~~~~~~vvgvDis~~Al~~A~~ 157 (414)
..++|-+|++ .|.....+++ ..+++|+++|.+++.++.+++
T Consensus 170 g~~vlV~Ga~ggiG~~~~~~a~-~~Ga~V~~~~~~~~~~~~~~~ 212 (347)
T 2hcy_A 170 GHWVAISGAAGGLGSLAVQYAK-AMGYRVLGIDGGEGKEELFRS 212 (347)
T ss_dssp TCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEECSTTHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHH-HCCCcEEEEcCCHHHHHHHHH
Confidence 4689999973 3434444443 357899999999888777654
No 474
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=28.36 E-value=40 Score=32.05 Aligned_cols=41 Identities=10% Similarity=0.133 Sum_probs=31.2
Q ss_pred CCeEEEECCcc--cHHHHHHHHHhcCCeeEEecCcHHHHHHHHH
Q 015035 116 KVKGFDIGTGA--NCIYPLLGASLLGWSFVGSDMTDVALEWAEK 157 (414)
Q Consensus 116 ~~~vLDIGtGs--G~I~i~La~~~~~~~vvgvDis~~Al~~A~~ 157 (414)
..+||-+|+|+ |..++.+++ ..+++|+++|.+++.++.+++
T Consensus 145 g~~VlV~Ga~g~iG~~~~~~a~-~~Ga~Vi~~~~~~~~~~~~~~ 187 (340)
T 3gms_A 145 NDVLLVNACGSAIGHLFAQLSQ-ILNFRLIAVTRNNKHTEELLR 187 (340)
T ss_dssp TCEEEESSTTSHHHHHHHHHHH-HHTCEEEEEESSSTTHHHHHH
T ss_pred CCEEEEeCCccHHHHHHHHHHH-HcCCEEEEEeCCHHHHHHHHh
Confidence 46899999874 445555555 457899999999998888875
No 475
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=28.22 E-value=1.9e+02 Score=25.70 Aligned_cols=55 Identities=15% Similarity=0.061 Sum_probs=39.3
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
..++|=.|.++| |+..++.++ .+++|+++|.+++.++...+.. ..++.++..|..
T Consensus 9 ~k~vlITGas~g-IG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~D~~ 65 (261)
T 3n74_A 9 GKVALITGAGSG-FGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI------GDAALAVAADIS 65 (261)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH------CTTEEEEECCTT
T ss_pred CCEEEEECCCch-HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh------CCceEEEEecCC
Confidence 357888887655 676666654 4789999999998876655432 246888888865
No 476
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=28.14 E-value=74 Score=30.57 Aligned_cols=41 Identities=12% Similarity=0.080 Sum_probs=30.0
Q ss_pred CCeEEEECC--cccHHHHHHHHHhcCCeeEEecCcHHHHHHHHH
Q 015035 116 KVKGFDIGT--GANCIYPLLGASLLGWSFVGSDMTDVALEWAEK 157 (414)
Q Consensus 116 ~~~vLDIGt--GsG~I~i~La~~~~~~~vvgvDis~~Al~~A~~ 157 (414)
..+||-+|. |.|..++.+++. .+++|+++|.+++.++.+++
T Consensus 164 g~~VlV~Ga~G~iG~~~~q~a~~-~Ga~Vi~~~~~~~~~~~~~~ 206 (362)
T 2c0c_A 164 GKKVLVTAAAGGTGQFAMQLSKK-AKCHVIGTCSSDEKSAFLKS 206 (362)
T ss_dssp TCEEEETTTTBTTHHHHHHHHHH-TTCEEEEEESSHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHh-CCCEEEEEECCHHHHHHHHH
Confidence 458999983 445555556654 47899999999988888764
No 477
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=28.10 E-value=72 Score=28.24 Aligned_cols=57 Identities=7% Similarity=-0.054 Sum_probs=39.5
Q ss_pred CeEEEECCcccHHHHHHHHHh--cCCeeEEecCc-HHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMT-DVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 117 ~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis-~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
.++|=.|. +|.|+..++.++ .+++|++++.+ +..++...+.++..+ .++.++..|..
T Consensus 8 k~vlVTGa-sggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~D~~ 67 (258)
T 3afn_B 8 KRVLITGS-SQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADG---GDAAFFAADLA 67 (258)
T ss_dssp CEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTT---CEEEEEECCTT
T ss_pred CEEEEeCC-CChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcC---CceEEEECCCC
Confidence 46776664 566888877754 47899999998 666665555555432 46888888864
No 478
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=28.08 E-value=1.9e+02 Score=25.35 Aligned_cols=55 Identities=16% Similarity=0.112 Sum_probs=38.0
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcE-EEEEccCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELI-EIRKVDNS 177 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI-~~~~~d~~ 177 (414)
..++|=.|.+ |.|+..++..+ .+++|++++.+++.++.+.+.+ ..++ .++..|..
T Consensus 11 ~k~vlITGas-ggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~~D~~ 68 (254)
T 2wsb_A 11 GACAAVTGAG-SGIGLEICRAFAASGARLILIDREAAALDRAAQEL------GAAVAARIVADVT 68 (254)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH------GGGEEEEEECCTT
T ss_pred CCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh------cccceeEEEEecC
Confidence 3568877754 56787777654 4789999999988776554443 1245 77888864
No 479
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=27.94 E-value=1.7e+02 Score=25.85 Aligned_cols=54 Identities=15% Similarity=-0.019 Sum_probs=38.8
Q ss_pred CeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 117 ~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
.++|=.|.++| |+..++.++ .+++|+++|.+++.++.+.+.+. .++.++..|..
T Consensus 4 k~vlVTGas~G-IG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~D~~ 59 (235)
T 3l6e_A 4 GHIIVTGAGSG-LGRALTIGLVERGHQVSMMGRRYQRLQQQELLLG------NAVIGIVADLA 59 (235)
T ss_dssp CEEEEESTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG------GGEEEEECCTT
T ss_pred CEEEEECCCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc------CCceEEECCCC
Confidence 35777776654 777777654 47899999999988776655441 24888888864
No 480
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=27.66 E-value=1.7e+02 Score=26.92 Aligned_cols=58 Identities=10% Similarity=-0.004 Sum_probs=39.1
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHH-HHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVA-LEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~A-l~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
..++|=.|.++| |+..++.++ .+++|+.++.+... .+.+.+-++.. ..++.++..|..
T Consensus 47 gk~vlVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~ 107 (291)
T 3ijr_A 47 GKNVLITGGDSG-IGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKE---GVKCVLLPGDLS 107 (291)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTT---TCCEEEEESCTT
T ss_pred CCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc---CCcEEEEECCCC
Confidence 457888886654 777777654 47899999988653 34444444433 357888988865
No 481
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=27.34 E-value=1e+02 Score=29.54 Aligned_cols=41 Identities=15% Similarity=0.038 Sum_probs=30.3
Q ss_pred CCeEEEECCcc-cHHHHHHHHHhcCCeeEEecCcHHHHHHHHH
Q 015035 116 KVKGFDIGTGA-NCIYPLLGASLLGWSFVGSDMTDVALEWAEK 157 (414)
Q Consensus 116 ~~~vLDIGtGs-G~I~i~La~~~~~~~vvgvDis~~Al~~A~~ 157 (414)
..+||=+|+|. |..++.+|+ ..+++|+++|.+++.++.|++
T Consensus 190 g~~VlV~G~G~vG~~a~qla~-~~Ga~Vi~~~~~~~~~~~~~~ 231 (363)
T 3uog_A 190 GDRVVVQGTGGVALFGLQIAK-ATGAEVIVTSSSREKLDRAFA 231 (363)
T ss_dssp TCEEEEESSBHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHH-HcCCEEEEEecCchhHHHHHH
Confidence 46899999664 444444554 457899999999999888754
No 482
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=27.19 E-value=1.1e+02 Score=27.05 Aligned_cols=56 Identities=18% Similarity=0.064 Sum_probs=39.1
Q ss_pred CeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 117 ~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
.++|=.|. +|.|+..++..+ .+++|++++.++..++...+.+.. ..++.++..|..
T Consensus 7 k~vlVtGa-sggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~D~~ 64 (251)
T 1zk4_A 7 KVAIITGG-TLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT----PDQIQFFQHDSS 64 (251)
T ss_dssp CEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC----TTTEEEEECCTT
T ss_pred cEEEEeCC-CChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhc----cCceEEEECCCC
Confidence 46776665 566887777654 478999999998877655444422 146888888864
No 483
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=27.14 E-value=39 Score=30.93 Aligned_cols=57 Identities=14% Similarity=0.066 Sum_probs=35.4
Q ss_pred CeEEEECCc-ccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 117 VKGFDIGTG-ANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 117 ~~vLDIGtG-sG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
.++|=.|.+ +|.|+..++..+ .+++|++++.+++.-+.+++-.+..+ .+.++..|..
T Consensus 7 k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~----~~~~~~~D~~ 66 (275)
T 2pd4_A 7 KKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELN----SPYVYELDVS 66 (275)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTT----CCCEEECCTT
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC----CcEEEEcCCC
Confidence 467888875 366888877765 47899999998752222222222222 2667777764
No 484
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=26.81 E-value=1.9e+02 Score=26.05 Aligned_cols=59 Identities=19% Similarity=0.077 Sum_probs=39.8
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCCeeEEecC-cHHHHHHHHHHHHHCCCCCCcEEEEEccCCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDM-TDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDi-s~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~ 178 (414)
..++|=.|.++ -|+..++.++ .+++|+.++. +.+.++...+.++..+ .++.++..|..+
T Consensus 18 ~k~~lVTGas~-gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~ 79 (270)
T 3is3_A 18 GKVALVTGSGR-GIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALG---SDAIAIKADIRQ 79 (270)
T ss_dssp TCEEEESCTTS-HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT---CCEEEEECCTTS
T ss_pred CCEEEEECCCc-hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC---CcEEEEEcCCCC
Confidence 45678777654 4777777654 4789998776 4566666555565543 468888888653
No 485
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=26.51 E-value=94 Score=29.17 Aligned_cols=58 Identities=12% Similarity=-0.000 Sum_probs=39.6
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCCeeEEecCc----------HHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMT----------DVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis----------~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
...+|=.|.+ |.|+..++.++ .+++|+.+|.+ .+.++.....+...+ .++.++..|..
T Consensus 27 gk~vlVTGas-~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~ 96 (322)
T 3qlj_A 27 GRVVIVTGAG-GGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAG---GEAVADGSNVA 96 (322)
T ss_dssp TCEEEETTTT-SHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTT---CEEEEECCCTT
T ss_pred CCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcC---CcEEEEECCCC
Confidence 3467777755 55777777654 47899999987 566666666665543 46788888764
No 486
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=26.25 E-value=69 Score=30.18 Aligned_cols=40 Identities=13% Similarity=0.040 Sum_probs=28.8
Q ss_pred CCeEEEECC--cccHHHHHHHHHhcCCeeEEecCcHHHHHHHH
Q 015035 116 KVKGFDIGT--GANCIYPLLGASLLGWSFVGSDMTDVALEWAE 156 (414)
Q Consensus 116 ~~~vLDIGt--GsG~I~i~La~~~~~~~vvgvDis~~Al~~A~ 156 (414)
..+||-+|+ |-|..++.+++ ..+++|+++|.+++.++.+.
T Consensus 150 g~~vlI~Ga~g~iG~~~~~~a~-~~Ga~Vi~~~~~~~~~~~~~ 191 (336)
T 4b7c_A 150 GETVVISGAAGAVGSVAGQIAR-LKGCRVVGIAGGAEKCRFLV 191 (336)
T ss_dssp TCEEEESSTTSHHHHHHHHHHH-HTTCEEEEEESSHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHH
Confidence 468999987 33444444554 45789999999998887763
No 487
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=26.19 E-value=1.8e+02 Score=25.92 Aligned_cols=55 Identities=9% Similarity=0.045 Sum_probs=38.0
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
..++|=.|.++ -|+..++.++ .+++|+++|.+++.++...+.+. .++.++..|..
T Consensus 9 gk~~lVTGas~-gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~Dv~ 65 (248)
T 3op4_A 9 GKVALVTGASR-GIGKAIAELLAERGAKVIGTATSESGAQAISDYLG------DNGKGMALNVT 65 (248)
T ss_dssp TCEEEESSCSS-HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG------GGEEEEECCTT
T ss_pred CCEEEEeCCCC-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc------ccceEEEEeCC
Confidence 34677777654 4777777654 57999999999988765544432 34677788864
No 488
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=25.87 E-value=1.7e+02 Score=27.04 Aligned_cols=58 Identities=10% Similarity=-0.034 Sum_probs=39.1
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCCeeEEecCc--HHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMT--DVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis--~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
..++|=.|.+ |.|+..++.++ .+++|+.++.+ ...++...+-++..+ .++.++..|..
T Consensus 49 ~k~vlVTGas-~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~ 110 (294)
T 3r3s_A 49 DRKALVTGGD-SGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECG---RKAVLLPGDLS 110 (294)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTT---CCEEECCCCTT
T ss_pred CCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcC---CcEEEEEecCC
Confidence 4578888865 45777777654 47899999987 445555555555443 46888888764
No 489
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=25.65 E-value=1.8e+02 Score=26.63 Aligned_cols=55 Identities=18% Similarity=0.067 Sum_probs=38.7
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
..++|=.|.++| |+..++..+ .+++|+.+|.+++.++...... ..++.++..|..
T Consensus 27 ~k~vlVTGas~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~Dv~ 83 (277)
T 4dqx_A 27 QRVCIVTGGGSG-IGRATAELFAKNGAYVVVADVNEDAAVRVANEI------GSKAFGVRVDVS 83 (277)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH------CTTEEEEECCTT
T ss_pred CCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh------CCceEEEEecCC
Confidence 357788886654 777777654 4789999999988766544332 246888888865
No 490
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=25.57 E-value=25 Score=31.71 Aligned_cols=58 Identities=10% Similarity=-0.106 Sum_probs=35.7
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCCeeEEec-CcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSD-MTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvD-is~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
+.++|=.|.+ |.|+..++.++ .+++|+.++ .+....+.....++..+ .++.++..|..
T Consensus 13 ~k~vlITGas-~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~ 73 (256)
T 3ezl_A 13 QRIAYVTGGM-GGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALG---FDFYASEGNVG 73 (256)
T ss_dssp CEEEEETTTT-SHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTT---CCCEEEECCTT
T ss_pred CCEEEEECCC-ChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC---CeeEEEecCCC
Confidence 4567777765 45777777654 478888877 44444443334444432 46788888864
No 491
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=25.37 E-value=47 Score=31.56 Aligned_cols=41 Identities=17% Similarity=0.148 Sum_probs=28.6
Q ss_pred CCeEEEECCcc-cHHHHHHHHHhcCC-eeEEecCcHHHHHHHHH
Q 015035 116 KVKGFDIGTGA-NCIYPLLGASLLGW-SFVGSDMTDVALEWAEK 157 (414)
Q Consensus 116 ~~~vLDIGtGs-G~I~i~La~~~~~~-~vvgvDis~~Al~~A~~ 157 (414)
..+||-+|+|. |..++.+|+ ..++ +|+++|.+++.++.+++
T Consensus 165 g~~VlV~GaG~vG~~~~q~a~-~~Ga~~Vi~~~~~~~~~~~~~~ 207 (343)
T 2dq4_A 165 GKSVLITGAGPIGLMAAMVVR-ASGAGPILVSDPNPYRLAFARP 207 (343)
T ss_dssp TSCEEEECCSHHHHHHHHHHH-HTTCCSEEEECSCHHHHGGGTT
T ss_pred CCEEEEECCCHHHHHHHHHHH-HcCCCEEEEECCCHHHHHHHHH
Confidence 35799999843 444444554 3577 99999999988776643
No 492
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=25.30 E-value=97 Score=28.52 Aligned_cols=58 Identities=12% Similarity=-0.076 Sum_probs=39.4
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHH-------HHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDV-------ALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~-------Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
...+|=.|.++| |+..++.++ .+++|++++.+++ .++.+.+.++..+ .++.++..|..
T Consensus 9 ~k~vlVTGas~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~ 75 (285)
T 3sc4_A 9 GKTMFISGGSRG-IGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAG---GQALPIVGDIR 75 (285)
T ss_dssp TCEEEEESCSSH-HHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHT---SEEEEEECCTT
T ss_pred CCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcC---CcEEEEECCCC
Confidence 357888887655 777777654 4789999999876 3444444444432 46888888865
No 493
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=25.27 E-value=82 Score=29.71 Aligned_cols=40 Identities=13% Similarity=0.150 Sum_probs=28.3
Q ss_pred CCeEEEECC--cccHHHHHHHHHhcCCeeEEecCcHHHHHHHH
Q 015035 116 KVKGFDIGT--GANCIYPLLGASLLGWSFVGSDMTDVALEWAE 156 (414)
Q Consensus 116 ~~~vLDIGt--GsG~I~i~La~~~~~~~vvgvDis~~Al~~A~ 156 (414)
..+||-+|+ |-|...+.+++ ..+++|+++|.+++.++.++
T Consensus 156 g~~vlI~Ga~g~iG~~~~~~a~-~~G~~V~~~~~~~~~~~~~~ 197 (345)
T 2j3h_A 156 GETVYVSAASGAVGQLVGQLAK-MMGCYVVGSAGSKEKVDLLK 197 (345)
T ss_dssp TCEEEESSTTSHHHHHHHHHHH-HTTCEEEEEESSHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHH
Confidence 468999986 33444444444 35789999999998887775
No 494
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=25.22 E-value=2.2e+02 Score=25.95 Aligned_cols=54 Identities=13% Similarity=-0.095 Sum_probs=38.2
Q ss_pred CeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 015035 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (414)
Q Consensus 117 ~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~ 177 (414)
.++|=.|.++| |+..++.++ .+++|+.+|.+++.++...+. . ..++.++..|..
T Consensus 6 k~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~---~---~~~~~~~~~Dv~ 61 (281)
T 3zv4_A 6 EVALITGGASG-LGRALVDRFVAEGARVAVLDKSAERLRELEVA---H---GGNAVGVVGDVR 61 (281)
T ss_dssp CEEEEETCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---T---BTTEEEEECCTT
T ss_pred CEEEEECCCcH-HHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHH---c---CCcEEEEEcCCC
Confidence 56788886655 777776654 478999999999877654332 2 346888888865
No 495
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=24.91 E-value=59 Score=31.10 Aligned_cols=40 Identities=18% Similarity=0.312 Sum_probs=27.5
Q ss_pred CeEEEECCcc-cHHH-HHHHHHhcCCe-eEEecCcHH---HHHHHH
Q 015035 117 VKGFDIGTGA-NCIY-PLLGASLLGWS-FVGSDMTDV---ALEWAE 156 (414)
Q Consensus 117 ~~vLDIGtGs-G~I~-i~La~~~~~~~-vvgvDis~~---Al~~A~ 156 (414)
.+||=+|+|. |.++ +.+|.+..+++ |+++|.+++ -++.|+
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~ 219 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIE 219 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHH
Confidence 6899999743 3444 44551245676 999999987 777765
No 496
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=24.76 E-value=1.7e+02 Score=26.62 Aligned_cols=58 Identities=17% Similarity=0.136 Sum_probs=37.7
Q ss_pred CCeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCC
Q 015035 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (414)
Q Consensus 116 ~~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~ 178 (414)
..++|=.|.++| |+..++.++ .+++|+++|.++...+.++ .+... ..++.++..|..+
T Consensus 31 gk~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~-~~~~~---~~~~~~~~~Dv~d 90 (273)
T 3uf0_A 31 GRTAVVTGAGSG-IGRAIAHGYARAGAHVLAWGRTDGVKEVAD-EIADG---GGSAEAVVADLAD 90 (273)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESSTHHHHHHH-HHHTT---TCEEEEEECCTTC
T ss_pred CCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEcCHHHHHHHHH-HHHhc---CCcEEEEEecCCC
Confidence 457888886654 777777654 4789999996655444433 33332 2468888888653
No 497
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=24.61 E-value=1.1e+02 Score=29.33 Aligned_cols=40 Identities=13% Similarity=0.080 Sum_probs=28.2
Q ss_pred CCeEEEECC--cccHHHHHHHHHhcCCeeEEecCcHHHHHHHH
Q 015035 116 KVKGFDIGT--GANCIYPLLGASLLGWSFVGSDMTDVALEWAE 156 (414)
Q Consensus 116 ~~~vLDIGt--GsG~I~i~La~~~~~~~vvgvDis~~Al~~A~ 156 (414)
..+||-+|+ |-|...+.+++ ..+++|+++|.+++.++.++
T Consensus 171 g~~vlV~GasggiG~~~~~~a~-~~Ga~Vi~~~~~~~~~~~~~ 212 (351)
T 1yb5_A 171 GESVLVHGASGGVGLAACQIAR-AYGLKILGTAGTEEGQKIVL 212 (351)
T ss_dssp TCEEEEETCSSHHHHHHHHHHH-HTTCEEEEEESSHHHHHHHH
T ss_pred cCEEEEECCCChHHHHHHHHHH-HCCCEEEEEeCChhHHHHHH
Confidence 458999996 33434444444 35789999999999888664
No 498
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=24.60 E-value=50 Score=26.29 Aligned_cols=35 Identities=14% Similarity=0.140 Sum_probs=25.9
Q ss_pred CeEEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHH
Q 015035 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALE 153 (414)
Q Consensus 117 ~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~ 153 (414)
.+++=+|+ |.++..++..+ .+++|+++|.+++.++
T Consensus 7 ~~v~I~G~--G~iG~~~a~~l~~~g~~v~~~d~~~~~~~ 43 (144)
T 2hmt_A 7 KQFAVIGL--GRFGGSIVKELHRMGHEVLAVDINEEKVN 43 (144)
T ss_dssp CSEEEECC--SHHHHHHHHHHHHTTCCCEEEESCHHHHH
T ss_pred CcEEEECC--CHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 36888885 77777776654 3678999999987654
No 499
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=24.50 E-value=1.8e+02 Score=25.81 Aligned_cols=58 Identities=10% Similarity=0.035 Sum_probs=38.7
Q ss_pred CeEEEECCcccHHHHHHHHHh--cCCeeEEecC-cHHHHHHHHHHHHHCCCCCCcEEEEEccCCC
Q 015035 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDM-TDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (414)
Q Consensus 117 ~~vLDIGtGsG~I~i~La~~~--~~~~vvgvDi-s~~Al~~A~~N~~~n~~l~~rI~~~~~d~~~ 178 (414)
.++|=.|.+ |-|+..++.++ .+++|+.++. +++.++.+.+.++..+ .++.++..|..+
T Consensus 5 k~~lVTGas-~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~d 65 (246)
T 3osu_A 5 KSALVTGAS-RGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKG---VDSFAIQANVAD 65 (246)
T ss_dssp CEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT---SCEEEEECCTTC
T ss_pred CEEEEECCC-ChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC---CcEEEEEccCCC
Confidence 356666654 45777777654 4789988887 5566666666665543 468888888653
No 500
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=24.41 E-value=66 Score=28.31 Aligned_cols=48 Identities=19% Similarity=0.025 Sum_probs=32.3
Q ss_pred EEEECCcccHHHHHHHHHh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 015035 119 GFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (414)
Q Consensus 119 vLDIGtGsG~I~i~La~~~--~~~~vvgvDis~~Al~~A~~N~~~n~~l~~rI~~~~~d~ 176 (414)
|+=+| .|.++..++..+ .+..|+.+|.+++.++...+. .+ +.++.+|.
T Consensus 3 iiIiG--~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~---~~-----~~~i~gd~ 52 (218)
T 3l4b_C 3 VIIIG--GETTAYYLARSMLSRKYGVVIINKDRELCEEFAKK---LK-----ATIIHGDG 52 (218)
T ss_dssp EEEEC--CHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHH---SS-----SEEEESCT
T ss_pred EEEEC--CCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH---cC-----CeEEEcCC
Confidence 44455 577888877764 478999999999987654321 22 45677764
Done!