Query 015042
Match_columns 414
No_of_seqs 187 out of 1360
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 05:38:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015042.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015042hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2wme_A BADH, betaine aldehyde 100.0 6.5E-97 2E-101 749.0 48.1 410 1-410 72-485 (490)
2 3ed6_A Betaine aldehyde dehydr 100.0 1.1E-93 3.7E-98 730.9 48.3 412 1-414 100-518 (520)
3 3ros_A NAD-dependent aldehyde 100.0 2.6E-93 8.9E-98 722.8 45.8 406 1-409 54-459 (484)
4 3rh9_A Succinate-semialdehyde 100.0 4.1E-93 1.4E-97 724.4 46.4 407 1-409 77-485 (506)
5 3u4j_A NAD-dependent aldehyde 100.0 5.3E-93 1.8E-97 727.1 46.8 412 1-414 91-505 (528)
6 3ifg_A Succinate-semialdehyde 100.0 2.9E-93 9.8E-98 723.1 44.4 405 1-407 78-483 (484)
7 3iwj_A Putative aminoaldehyde 100.0 1.1E-92 3.7E-97 722.6 46.7 412 1-414 78-497 (503)
8 1bxs_A Aldehyde dehydrogenase; 100.0 1.8E-92 6.1E-97 719.6 47.8 410 1-410 89-498 (501)
9 2o2p_A Formyltetrahydrofolate 100.0 1.3E-92 4.4E-97 722.5 45.0 407 1-407 104-516 (517)
10 3ek1_A Aldehyde dehydrogenase; 100.0 8.9E-93 3E-97 721.6 43.6 405 1-409 98-503 (504)
11 1o04_A Aldehyde dehydrogenase, 100.0 1.6E-92 5.5E-97 719.7 45.1 409 1-409 88-496 (500)
12 4f3x_A Putative aldehyde dehyd 100.0 1.3E-92 4.6E-97 720.0 43.9 406 1-408 90-497 (498)
13 3b4w_A Aldehyde dehydrogenase; 100.0 4.6E-92 1.6E-96 716.1 43.7 406 1-409 76-483 (495)
14 3k2w_A Betaine-aldehyde dehydr 100.0 5.3E-92 1.8E-96 716.6 43.9 408 1-410 78-490 (497)
15 2d4e_A 5-carboxymethyl-2-hydro 100.0 2.3E-91 7.9E-96 714.2 48.5 406 1-409 92-506 (515)
16 1a4s_A ALDH, betaine aldehyde 100.0 1.1E-91 3.7E-96 714.7 45.7 407 1-410 86-498 (503)
17 3r31_A BADH, betaine aldehyde 100.0 3.9E-92 1.3E-96 719.0 41.5 408 1-414 80-496 (517)
18 3jz4_A Succinate-semialdehyde 100.0 3.3E-91 1.1E-95 709.0 47.3 405 1-407 75-480 (481)
19 3qan_A 1-pyrroline-5-carboxyla 100.0 2.7E-91 9.2E-96 716.0 46.2 407 1-410 102-518 (538)
20 2ve5_A BADH, betaine aldehyde 100.0 4.6E-91 1.6E-95 709.9 47.7 409 1-410 72-485 (490)
21 1wnd_A Putative betaine aldehy 100.0 3.9E-91 1.3E-95 708.7 46.1 404 1-407 88-494 (495)
22 2imp_A Lactaldehyde dehydrogen 100.0 5.1E-91 1.7E-95 707.3 46.8 405 1-407 72-478 (479)
23 3prl_A NADP-dependent glyceral 100.0 2.4E-91 8.1E-96 711.9 44.4 402 1-410 77-485 (505)
24 3i44_A Aldehyde dehydrogenase; 100.0 1.2E-90 4.1E-95 705.4 48.6 401 1-405 91-495 (497)
25 3etf_A Putative succinate-semi 100.0 2.5E-90 8.5E-95 700.1 46.8 405 1-408 57-461 (462)
26 4e4g_A Methylmalonate-semialde 100.0 1.2E-90 4.1E-95 708.6 44.6 406 1-409 92-506 (521)
27 3pqa_A Lactaldehyde dehydrogen 100.0 2.1E-90 7.1E-95 701.9 44.6 399 1-409 62-465 (486)
28 2w8n_A Succinate-semialdehyde 100.0 1.2E-90 4.2E-95 704.9 41.7 404 1-407 76-485 (487)
29 3r64_A NAD dependent benzaldeh 100.0 6.1E-90 2.1E-94 703.1 45.7 408 1-414 78-496 (508)
30 1uxt_A Glyceraldehyde-3-phosph 100.0 3.9E-90 1.3E-94 702.9 42.2 405 1-413 83-498 (501)
31 4dng_A Uncharacterized aldehyd 100.0 8.9E-90 3.1E-94 699.6 43.1 406 1-411 72-481 (485)
32 2j6l_A Aldehyde dehydrogenase 100.0 1.8E-89 6.1E-94 698.5 44.9 405 1-408 87-499 (500)
33 1uzb_A 1-pyrroline-5-carboxyla 100.0 4.4E-89 1.5E-93 698.1 46.2 404 1-407 102-515 (516)
34 1euh_A NADP dependent non phos 100.0 2.3E-89 8E-94 694.4 43.4 400 1-408 68-474 (475)
35 3ty7_A Putative aldehyde dehyd 100.0 3E-89 1E-93 694.5 39.7 400 1-406 73-475 (478)
36 1t90_A MMSDH, probable methylm 100.0 1.9E-88 6.6E-93 689.1 43.0 405 1-409 71-481 (486)
37 3sza_A Aldehyde dehydrogenase, 100.0 1.9E-87 6.5E-92 677.9 44.4 397 1-408 46-448 (469)
38 4h7n_A Aldehyde dehydrogenase; 100.0 1.3E-87 4.3E-92 681.6 41.8 408 1-414 56-471 (474)
39 4e3x_A Delta-1-pyrroline-5-car 100.0 4.4E-87 1.5E-91 686.2 43.8 407 1-409 128-552 (563)
40 3lns_A Benzaldehyde dehydrogen 100.0 1.1E-85 3.8E-90 664.4 43.9 394 1-407 56-456 (457)
41 3ju8_A Succinylglutamic semial 100.0 1.4E-85 4.7E-90 668.7 42.0 398 1-408 70-471 (490)
42 4f9i_A Proline dehydrogenase/d 100.0 4.5E-85 1.5E-89 705.8 46.0 407 1-409 596-1011(1026)
43 2y53_A Aldehyde dehydrogenase 100.0 1E-83 3.6E-88 661.4 40.8 401 1-406 72-517 (534)
44 3haz_A Proline dehydrogenase; 100.0 2.7E-82 9.2E-87 682.8 43.6 401 1-408 578-987 (1001)
45 3v4c_A Aldehyde dehydrogenase 100.0 4.6E-80 1.6E-84 633.5 36.8 390 1-404 91-514 (528)
46 1ez0_A ALDH, aldehyde dehydrog 100.0 1.4E-79 4.8E-84 627.4 39.1 389 1-405 58-480 (510)
47 3k9d_A LMO1179 protein, aldehy 100.0 2.4E-75 8.3E-80 590.0 28.4 385 1-409 40-450 (464)
48 1vlu_A Gamma-glutamyl phosphat 100.0 5.7E-76 2E-80 593.5 18.8 368 1-408 42-440 (468)
49 2h5g_A Delta 1-pyrroline-5-car 100.0 1.1E-73 3.9E-78 576.0 25.0 359 1-409 57-436 (463)
50 4ghk_A Gamma-glutamyl phosphat 100.0 1.6E-72 5.4E-77 566.1 25.8 360 1-408 54-439 (444)
51 1o20_A Gamma-glutamyl phosphat 100.0 1.2E-72 4E-77 564.4 24.4 359 1-409 42-423 (427)
52 3my7_A Alcohol dehydrogenase/a 100.0 3.7E-71 1.3E-75 557.7 23.2 383 1-409 35-450 (452)
53 1kae_A HDH, histidinol dehydro 97.7 0.018 6.2E-07 55.7 25.4 260 61-405 113-393 (434)
54 4gic_A HDH, histidinol dehydro 97.7 0.016 5.6E-07 55.9 24.9 261 61-405 119-400 (423)
55 2fiu_A Conserved hypothetical 63.7 22 0.00075 26.7 6.8 59 260-338 17-76 (99)
56 1s7i_A Hypothetical protein PA 61.9 34 0.0011 26.9 7.8 74 261-339 30-108 (124)
57 3v42_A Folliculin; tumor suppr 61.8 9.4 0.00032 33.6 4.9 67 88-162 20-86 (226)
58 3lo3_A Uncharacterized conserv 45.3 41 0.0014 24.9 5.5 24 316-339 53-76 (94)
59 3pzy_A MOG; ssgcid, seattle st 42.8 19 0.00066 29.9 3.6 50 113-163 28-79 (164)
60 1b93_A Protein (methylglyoxal 42.4 41 0.0014 27.5 5.4 114 73-212 12-135 (152)
61 2yvq_A Carbamoyl-phosphate syn 38.3 41 0.0014 27.1 4.8 63 118-182 60-132 (143)
62 3rfq_A Pterin-4-alpha-carbinol 36.1 22 0.00075 30.2 2.9 52 112-163 49-102 (185)
63 3hhl_A RPA0582; alpha-beta-bar 35.9 77 0.0026 25.5 6.1 65 257-338 45-110 (143)
64 3iwt_A 178AA long hypothetical 35.8 49 0.0017 27.5 5.2 52 112-163 40-94 (178)
65 2i2c_A Probable inorganic poly 35.6 54 0.0019 29.4 5.8 88 102-208 5-95 (272)
66 1b4b_A Arginine repressor; cor 34.5 74 0.0025 22.1 5.1 56 98-170 12-67 (71)
67 2zfz_A Arginine repressor; DNA 33.9 78 0.0027 22.5 5.2 36 98-137 20-55 (79)
68 2bon_A Lipid kinase; DAG kinas 32.6 2.4E+02 0.0082 25.8 9.9 104 101-208 33-146 (332)
69 2xw6_A MGS, methylglyoxal synt 32.4 26 0.0009 28.1 2.6 78 91-179 23-109 (134)
70 2ioj_A Hypothetical protein AF 32.3 48 0.0016 26.3 4.3 48 129-177 53-100 (139)
71 1xxa_A ARGR, arginine represso 30.7 64 0.0022 23.0 4.3 57 98-170 14-70 (78)
72 2p5m_A Arginine repressor; alp 30.4 72 0.0025 23.0 4.6 56 98-170 24-79 (83)
73 3u3x_A Oxidoreductase; structu 29.7 3.2E+02 0.011 25.2 10.4 88 142-246 80-169 (361)
74 1vmd_A MGS, methylglyoxal synt 28.6 52 0.0018 27.7 3.9 120 67-212 21-151 (178)
75 1y5e_A Molybdenum cofactor bio 27.1 33 0.0011 28.4 2.5 52 112-163 31-85 (169)
76 2pjk_A 178AA long hypothetical 26.7 37 0.0013 28.5 2.7 52 112-163 40-94 (178)
77 3v4g_A Arginine repressor; vib 26.6 62 0.0021 27.3 4.1 39 97-138 115-153 (180)
78 2qv7_A Diacylglycerol kinase D 25.6 1.7E+02 0.0059 26.8 7.6 105 101-209 28-143 (337)
79 2ec4_A FAS-associated factor 1 25.0 28 0.00097 29.3 1.7 49 311-359 25-77 (178)
80 1mkz_A Molybdenum cofactor bio 24.8 34 0.0012 28.5 2.2 50 113-162 29-81 (172)
81 3kbq_A Protein TA0487; structu 23.3 38 0.0013 28.4 2.2 50 112-161 23-73 (172)
82 2v9v_A Selenocysteine-specific 22.9 80 0.0027 24.5 4.0 63 219-284 55-124 (135)
83 2ixa_A Alpha-N-acetylgalactosa 22.6 4.6E+02 0.016 24.9 10.3 147 75-246 23-171 (444)
84 2l69_A Rossmann 2X3 fold prote 21.3 1.7E+02 0.0059 21.5 5.1 43 319-361 54-99 (134)
85 1b4a_A Arginine repressor; hel 21.2 1.4E+02 0.0047 24.2 5.1 56 98-170 90-145 (149)
86 2pbq_A Molybdenum cofactor bio 21.0 49 0.0017 27.7 2.4 50 112-162 25-80 (178)
87 3mwd_B ATP-citrate synthase; A 20.1 5.2E+02 0.018 23.8 10.4 86 97-188 167-264 (334)
No 1
>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=6.5e-97 Score=748.95 Aligned_cols=410 Identities=45% Similarity=0.770 Sum_probs=392.6
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccCCCcccceeecCCceEEEEcC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTLREPVGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.+++++.+.+++.+...+...+...+.+++|+|||++|+|
T Consensus 72 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P 151 (490)
T 2wme_A 72 LRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGA 151 (490)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEEETTEEEEEEEEECSEEEEECC
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhccccccCccccccCCcceeEEecceeEEEEecc
Confidence 57899999999999999999999999998766689999999999999998887776666566778999999999999999
Q ss_pred CccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCCc
Q 015042 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|++++.++++.|+.||+||+|.||||+
T Consensus 152 wNfP~~~~~~~~a~ALaaGNtVVlKPse~tp~ta~~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~ 231 (490)
T 2wme_A 152 WNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGT 231 (490)
T ss_dssp SSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCH
T ss_pred ccCcchhhhhhHHHHHHcCCeEEEECCcCCHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECCh
Confidence 99999999999999999999999999999999999999999999999999999999888999999999999999999999
Q ss_pred HHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHHh
Q 015042 161 DVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240 (414)
Q Consensus 161 ~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~~ 240 (414)
.+|+++.+.++.+++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++
T Consensus 232 ~~G~~i~~~~a~~~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~ 311 (490)
T 2wme_A 232 STGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQ 311 (490)
T ss_dssp HHHHHHHHHHHHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhccCCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHhccCCCcCCCceeeccchhHHHHHHHHHHHHHH
Confidence 99999987665478999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC----CCCceeeeEEEeeCCCcccccccceecc
Q 015042 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG----DKGYYIEPTIFTNVKEDMIIAKEEIFGP 316 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 316 (414)
++++|+|.++++++||+++..+++++.++|++++.+|+++++||.... .+|+|++|||+.+++++|.+++||+|||
T Consensus 312 ~l~vGdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGP 391 (490)
T 2wme_A 312 RIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGP 391 (490)
T ss_dssp TCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSS
T ss_pred hCcCCCCccccCccCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCC
Confidence 999999999999999999999999999999999999999999998753 3689999999999999999999999999
Q ss_pred eEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHHH
Q 015042 317 VMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLY 396 (414)
Q Consensus 317 vl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~~ 396 (414)
|++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|++|++
T Consensus 392 Vl~v~~~~~~deAi~~aN~~~yGL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PFGG~k~SG~Gre~G~~gl~ 471 (490)
T 2wme_A 392 VMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLA 471 (490)
T ss_dssp EEEEEEESCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBSHHHHHH
T ss_pred EEEEEEeCCHHHHHHHHhcCCCCCeEEEEcCCHHHHHHHHHHCCeeEEEEeCCCCCCCCCCcccccccccCchhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998888889999999999999999999999
Q ss_pred hhheeeEEEeeCCC
Q 015042 397 KYLQIKSVVTPIYN 410 (414)
Q Consensus 397 ~~~~~k~i~~~~~~ 410 (414)
+||+.|+|+++.+.
T Consensus 472 ~ft~~K~v~i~~g~ 485 (490)
T 2wme_A 472 HYTRIKSVQVELGD 485 (490)
T ss_dssp TTEEEEEEEEECSC
T ss_pred HhhceeEEEEECCC
Confidence 99999999999864
No 2
>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*
Probab=100.00 E-value=1.1e-93 Score=730.90 Aligned_cols=412 Identities=41% Similarity=0.742 Sum_probs=392.2
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccC-CCcccceeecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS-SELQGYTLREPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++. .|+..+++.+++++.+.++..+...+.. .+...+++++|+|||++|+
T Consensus 100 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~ 178 (520)
T 3ed6_A 100 VRAIADKIKEHREALARLETLDTGKTLEESY-ADMDDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKEPVGVVTQIT 178 (520)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHTTSCCEEEECCSSTTEEEEEEEEECCEEEEEC
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCeecccCCCCCcccccccCccEEEEEC
Confidence 5789999999999999999999999999865 5999999999999999887766554433 4556789999999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCC
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|+||++++++.++++.|+.||+||+|.||||
T Consensus 179 PwN~P~~~~~~~~apALaaGNtVVlKPs~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTGS 258 (520)
T 3ed6_A 179 PWNYPLLQASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGG 258 (520)
T ss_dssp CSSSHHHHHHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEEESC
T ss_pred CCccHHHHHHHHHHHHHHcCCEEEEEcCCcchHHHHHHHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999987889999999999999999999
Q ss_pred cHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHH
Q 015042 160 TDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239 (414)
Q Consensus 160 ~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~ 239 (414)
+.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++
T Consensus 259 ~~vG~~i~~~aa-~~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~ 337 (520)
T 3ed6_A 259 IETGKHIMKNAA-NNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRV 337 (520)
T ss_dssp HHHHHHHHHHHH-TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhh-hcCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccCceEEEcHHHHHHHHHHHHHHH
Confidence 999999999998 8899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC----CCCceeeeEEEeeCCCcccccccceec
Q 015042 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG----DKGYYIEPTIFTNVKEDMIIAKEEIFG 315 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fg 315 (414)
+++++|+|.|+++++||+++..+++++.+++++++++|+++++||.... ..|+|++|||+.+++++|++++||+||
T Consensus 338 ~~l~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFG 417 (520)
T 3ed6_A 338 KKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFG 417 (520)
T ss_dssp TTCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCS
T ss_pred HhccCCCCccCCCcccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCCccccCceeC
Confidence 9999999999999999999999999999999999999999999998642 479999999999999999999999999
Q ss_pred ceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHH
Q 015042 316 PVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESL 395 (414)
Q Consensus 316 Pvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~ 395 (414)
||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|++|+
T Consensus 418 PVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gre~G~~gl 497 (520)
T 3ed6_A 418 PVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPYFAQAPWGGYKQSGIGRELGKEGL 497 (520)
T ss_dssp SEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESCSCCCCTTSCBCCSGGGEESCBSHHHHH
T ss_pred cEEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHHCCcceEEECCCCCCCCCCCcCCcCcCcCCccchHHHH
Confidence 99999999999999999999999999999999999999999999999999999887788999999999999999999999
Q ss_pred HhhheeeEEEeeCC--CCCCC
Q 015042 396 YKYLQIKSVVTPIY--NSPWL 414 (414)
Q Consensus 396 ~~~~~~k~i~~~~~--~~~~~ 414 (414)
++||+.|+|+++.+ ..+||
T Consensus 498 ~~~t~~k~v~~~~~~~~~~~~ 518 (520)
T 3ed6_A 498 EEYLVSKHILTNTNPQLVNWF 518 (520)
T ss_dssp HTTEEEEEEEEESSCCCCCCS
T ss_pred HHhhceEEEEEcCCCCccCcc
Confidence 99999999999876 45676
No 3
>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}
Probab=100.00 E-value=2.6e-93 Score=722.81 Aligned_cols=406 Identities=28% Similarity=0.456 Sum_probs=388.2
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccCCCcccceeecCCceEEEEcC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTLREPVGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++. .|+..+++.+++++..+++..+...+...+...+.+++|+|||++|+|
T Consensus 54 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P 132 (484)
T 3ros_A 54 LHDIANALKEHEDELAKMMTLEMGKLLSESK-EEVELCVSICNYYADHGPEMLKPTKLNSDLGNAYYLKQSTGVIMACEP 132 (484)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHTSCEEECCTTSEEEEEEECCCEEEEECC
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCeeccCCCceeEEEecCCceEEEECC
Confidence 5789999999999999999999999999875 699999999999999988776654443355678999999999999999
Q ss_pred CccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCCc
Q 015042 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++++.+.++ |+.||+||+|+||||+
T Consensus 133 wN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~ 211 (484)
T 3ros_A 133 WNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAALTAKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSE 211 (484)
T ss_dssp SSSTTHHHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCH
T ss_pred CchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCH
Confidence 999999999999999999999999999999999999999999999999999999997777788 9999999999999999
Q ss_pred HHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHHh
Q 015042 161 DVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240 (414)
Q Consensus 161 ~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~~ 240 (414)
.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++
T Consensus 212 ~~G~~i~~~aa-~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~ 290 (484)
T 3ros_A 212 RGGSAVAEAAG-KNLKKSTMELGGNDAFIVLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFS 290 (484)
T ss_dssp HHHHHHHHHHH-HTTCEEEEECCCCCEEEECTTCCHHHHHHHHTTTTTGGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHh-ccCCceEeecCCCCcceeCCCCCHHHHHHHHHHHHhcCCCCCccCCceEEEcHHHHHHHHHHHHHHHH
Confidence 99999999988 88999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecceEEE
Q 015042 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGPVMAL 320 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v 320 (414)
++++|+|.++++++||+++..+++++.+++++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|
T Consensus 291 ~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v 370 (484)
T 3ros_A 291 NLKAGDPLEADTTLPPMNSEKAKEKLEAQVKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEV 370 (484)
T ss_dssp TCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEEECCCCCCSSCCCCCEEEECCCTTSTTTTSCCCSSEEEE
T ss_pred hccCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCcCCCCCceeCCeEeecCCCCCcccccccccceEEE
Confidence 99999999999999999999999999999999999999999999865568999999999999999999999999999999
Q ss_pred EeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHHHhhhe
Q 015042 321 MKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQ 400 (414)
Q Consensus 321 ~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~~~~~~ 400 (414)
++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++||+
T Consensus 371 ~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~ 450 (484)
T 3ros_A 371 FVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKVSAQIETGMTVINGRWITSGELPFGGIKKSGYGRELSGLGLMAFVN 450 (484)
T ss_dssp EEESSHHHHHHHHHSSSCCSCEEEECSCHHHHHHHHHHSCSSCCEETSCCCCCTTSCBCCSGGGEESCBSHHHHHTTTCE
T ss_pred EEcCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCccceEEECCCCCCCCCCCcCCcCcccCCcCchHHHHHHhhe
Confidence 99999999999999999999999999999999999999999999999988788999999999999999999999999999
Q ss_pred eeEEEeeCC
Q 015042 401 IKSVVTPIY 409 (414)
Q Consensus 401 ~k~i~~~~~ 409 (414)
.|+|+++..
T Consensus 451 ~K~v~~~~~ 459 (484)
T 3ros_A 451 EHLVIDVTK 459 (484)
T ss_dssp EEEEEECGG
T ss_pred eEEEEECCC
Confidence 999988754
No 4
>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}
Probab=100.00 E-value=4.1e-93 Score=724.43 Aligned_cols=407 Identities=35% Similarity=0.641 Sum_probs=388.2
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccCCCcccceee-cCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTLR-EPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~-~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++. .|+..+++.+++++.++++..+...+...+...++++ +|+|||++|+
T Consensus 77 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~ 155 (506)
T 3rh9_A 77 LEDIRDGLKENREEIGRILCMEHGKPWKEAQ-GEVDYAAGFFDYCAKHISALDSHTIPEKPKDCTWTVHYRPVGVTGLIV 155 (506)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGGCCEECSCCGGGCEEEEEEEECCSEEEEC
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCceeeEeecccceEEEEEC
Confidence 5789999999999999999999999999875 7999999999999999988766655443456678889 9999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCC
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|++++++.+.++.|+.||+||+|+||||
T Consensus 156 PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS 235 (506)
T 3rh9_A 156 PWNFPIGMIAKKLSAALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGS 235 (506)
T ss_dssp CSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESC
T ss_pred CCchHHHHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999988889999999999999999999
Q ss_pred cHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHH
Q 015042 160 TDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239 (414)
Q Consensus 160 ~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~ 239 (414)
+.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++
T Consensus 236 ~~vG~~i~~~aa-~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~ 314 (506)
T 3rh9_A 236 TEVGRKLIVDTA-EQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERV 314 (506)
T ss_dssp HHHHHHHHHHTT-TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhh-hcCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCCCCcccCcEEEEcHHHHHHHHHHHHHHH
Confidence 999999999988 8899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCC-CCceeeeEEEeeCCCcccccccceecceE
Q 015042 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGD-KGYYIEPTIFTNVKEDMIIAKEEIFGPVM 318 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~-~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl 318 (414)
+++++|+|.++++++||+++..+++++.+++++++++|+++++||...+. .|+|++|||+.+++++|++++||+||||+
T Consensus 315 ~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl 394 (506)
T 3rh9_A 315 NKMTVGDGMNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLV 394 (506)
T ss_dssp HHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGGCCSSSCCCCEEEECCCTTSHHHHSCCCSSEE
T ss_pred HhccCCCCcccCCcccccCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCCCcEECCeEEccCCCCChhhcccccCcEE
Confidence 99999999999999999999999999999999999999999999986444 79999999999999999999999999999
Q ss_pred EEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHHHhh
Q 015042 319 ALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKY 398 (414)
Q Consensus 319 ~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~~~~ 398 (414)
+|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++|
T Consensus 395 ~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~f 474 (506)
T 3rh9_A 395 PMALFRTEEEVIDAGNDTEFGLASYVFTADAERAQRVAAGLRFGHVGWNTGTGPTPEAPFGGMKASGIGREGGLEGLFEF 474 (506)
T ss_dssp EEEEECCHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCCSEEEESCCCCCCTTSCBCCSGGGEESCBSHHHHHTTT
T ss_pred EEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCccCcCcCcCCcCccHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999988888999999999999999999999999
Q ss_pred heeeEEEeeCC
Q 015042 399 LQIKSVVTPIY 409 (414)
Q Consensus 399 ~~~k~i~~~~~ 409 (414)
|+.|+|+++..
T Consensus 475 t~~K~v~~~~~ 485 (506)
T 3rh9_A 475 VEAQTVPRGFA 485 (506)
T ss_dssp EEEEEEEEC--
T ss_pred cceEEEEEcCc
Confidence 99999988654
No 5
>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}
Probab=100.00 E-value=5.3e-93 Score=727.13 Aligned_cols=412 Identities=44% Similarity=0.725 Sum_probs=392.9
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccC-CCcccceeecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS-SELQGYTLREPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.++++++++++..+...+.. .+...+++++|+|||++|+
T Consensus 91 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~ 169 (528)
T 3u4j_A 91 MFKVADLILARQEELALIESLEVGKPIAQA-RGEIGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVVGIIT 169 (528)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHTTCCEEEECCSCTTEEEEEEEEECCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCeeeccCCCCceeEEEeccceEEEEEC
Confidence 578999999999999999999999999987 67999999999999999887766555443 4566889999999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCC
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|++++.+.++++.|+.||+||+|+||||
T Consensus 170 PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS 249 (528)
T 3u4j_A 170 PWNFPFIIASERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGS 249 (528)
T ss_dssp CSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESC
T ss_pred CCccHHHHHHHHHHHHHHcCCeEEEEcCCccHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCC
Confidence 99999999999999999999999999999999999999999999999999999999988889999999999999999999
Q ss_pred cHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHH
Q 015042 160 TDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239 (414)
Q Consensus 160 ~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~ 239 (414)
+.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++
T Consensus 250 ~~~G~~i~~~aa-~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~ 328 (528)
T 3u4j_A 250 VRVGTKLGEIAA-RTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLLDIS 328 (528)
T ss_dssp HHHHHHHHHHHH-TTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-hcCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCCCEEEEechHHHHHHHHHHHHH
Confidence 999999999988 8999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCC-CCceeeeEEEeeCCCcccccccceecceE
Q 015042 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGD-KGYYIEPTIFTNVKEDMIIAKEEIFGPVM 318 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~-~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl 318 (414)
+++++|+|.++++++||+++..+++++.+++++++++|+++++||..... .|+|++|||+.+++++|++++||+||||+
T Consensus 329 ~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl 408 (528)
T 3u4j_A 329 RKVAFGDPLNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVL 408 (528)
T ss_dssp HHCCEECTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEECTTTSCEECCEEEESCCTTSHHHHSCCCSSEE
T ss_pred HhhcCCCCCCcCCccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCcEecceEEecCCCCCccccceeeccEE
Confidence 99999999999999999999999999999999999999999999987544 79999999999999999999999999999
Q ss_pred EEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHHHhh
Q 015042 319 ALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKY 398 (414)
Q Consensus 319 ~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~~~~ 398 (414)
+|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++|
T Consensus 409 ~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~f 488 (528)
T 3u4j_A 409 STLTFKTADEAVALANATEFGLSASVWSTNLETALQTIRRIRAGRCWINSVIDGTPELPIGGYKKSGLGRELGRYGFDEY 488 (528)
T ss_dssp EEEEESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBSTTHHHHHT
T ss_pred EEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCcCCcCcCCCCcCchHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999988888999999999999999999999999
Q ss_pred heeeEEEeeCC-CCCCC
Q 015042 399 LQIKSVVTPIY-NSPWL 414 (414)
Q Consensus 399 ~~~k~i~~~~~-~~~~~ 414 (414)
|+.|+|+++.+ ..+||
T Consensus 489 t~~K~v~~~~~~~~~~~ 505 (528)
T 3u4j_A 489 SQFKGVHVTLGRPAPWF 505 (528)
T ss_dssp EEEEEEEEESSCCCCSC
T ss_pred hceEEEEEeCCCCCCcc
Confidence 99999998875 45676
No 6
>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q
Probab=100.00 E-value=2.9e-93 Score=723.10 Aligned_cols=405 Identities=39% Similarity=0.642 Sum_probs=386.9
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccC-CCcccceeecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS-SELQGYTLREPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++.+.++..+...+.. .+...+.+++|+|||++|+
T Consensus 78 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~ 156 (484)
T 3ifg_A 78 LRRWFDLVIANSDDLALILTTEQGKPLAEA-KGEIAYAASFIEWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAIT 156 (484)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECSSEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHhhcCccccccCCCceeEEEecCCcEEEEEC
Confidence 578999999999999999999999999975 46999999999999998877666554432 4567889999999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCC
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|++++++.++++.|+.||+||+|.||||
T Consensus 157 PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS 236 (484)
T 3ifg_A 157 PWNFPAAMIARKVGPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGS 236 (484)
T ss_dssp CSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESC
T ss_pred CCcChHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999877889999999999999999999
Q ss_pred cHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHH
Q 015042 160 TDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239 (414)
Q Consensus 160 ~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~ 239 (414)
+.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++
T Consensus 237 ~~~G~~i~~~aa-~~~k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~ 315 (484)
T 3ifg_A 237 TAVGRLLMAQSA-PTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAV 315 (484)
T ss_dssp HHHHHHHHHHTG-GGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhh-ccCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCCeEEEcHHHHHHHHHHHHHHH
Confidence 999999999988 8899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecceEE
Q 015042 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGPVMA 319 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~ 319 (414)
+++++|+|.++++++||+++..+++++.+++++++++|+++++||......|+|++|||+.+++++|++++||+||||++
T Consensus 316 ~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~ 395 (484)
T 3ifg_A 316 SKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAP 395 (484)
T ss_dssp HTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEEEECTTSGGGTSCCCSSEEE
T ss_pred HhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCceEcCEEEecCCCCChhhCCeeeCcEEE
Confidence 99999999999999999999999999999999999999999999987555799999999999999999999999999999
Q ss_pred EEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHHHhhh
Q 015042 320 LMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYL 399 (414)
Q Consensus 320 v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~~~~~ 399 (414)
|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++....+.+||||+|+||+|+++|++|+++||
T Consensus 396 v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~Gr~~g~~gl~~~~ 475 (484)
T 3ifg_A 396 LFRFASEEELVRLANDTEFGLAAYLYSRDIGRVWRVAEALEYGMVGINTGLISNEVAPFGGVKQSGLGREGSHYGIDDYV 475 (484)
T ss_dssp EEEECCHHHHHHHHHCSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCSSSCBCCEETTEECCBSTTTTTGGGE
T ss_pred EEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcCcCCCCchHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999998777789999999999999999999999999
Q ss_pred eeeEEEee
Q 015042 400 QIKSVVTP 407 (414)
Q Consensus 400 ~~k~i~~~ 407 (414)
+.|+|++.
T Consensus 476 ~~k~v~~~ 483 (484)
T 3ifg_A 476 VIKYLCVA 483 (484)
T ss_dssp EEEEEEEE
T ss_pred ceEEEEEe
Confidence 99999764
No 7
>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*
Probab=100.00 E-value=1.1e-92 Score=722.61 Aligned_cols=412 Identities=43% Similarity=0.761 Sum_probs=389.3
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCccc-cc---CCCcccceeecCCceEE
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVL-KM---SSELQGYTLREPVGVVG 76 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~-~~---~~~~~~~~~~~P~Gvv~ 76 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++.+.+++.+... +. ..+...+++++|+|||+
T Consensus 78 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~ 156 (503)
T 3iwj_A 78 LRAIAAKVTEKKPELAKLESIDCGKPLDEA-AWDIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVG 156 (503)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEE
Confidence 578999999999999999999999999986 56999999999999998877654431 11 13456789999999999
Q ss_pred EEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEE
Q 015042 77 HIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCF 156 (414)
Q Consensus 77 ~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~ 156 (414)
+|+|||||+...++++++||++||+||+|||+.+|+++..+.+++.++|+|+|++|++++++.+.++.|+.||+||+|.|
T Consensus 157 ~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~F 236 (503)
T 3iwj_A 157 LITPWNYPMLMATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAF 236 (503)
T ss_dssp EECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEE
T ss_pred EECCCchHHHHHHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999988789999999999999999
Q ss_pred eCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHH
Q 015042 157 TGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLL 236 (414)
Q Consensus 157 tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~ 236 (414)
|||+.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+
T Consensus 237 TGS~~~G~~i~~~aa-~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~ 315 (503)
T 3iwj_A 237 TGSSATGSKIMTAAA-QLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIV 315 (503)
T ss_dssp ESCHHHHHHHHHHHG-GGTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTTHHHHHHHHH
T ss_pred ECcHHHHHHHHHHHh-cCCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccCCeeEEcHHHHHHHHHHHH
Confidence 999999999999988 8999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC--CCCceeeeEEEeeCCCccccccccee
Q 015042 237 EKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG--DKGYYIEPTIFTNVKEDMIIAKEEIF 314 (414)
Q Consensus 237 ~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~f 314 (414)
++++++++|+|.++++++||+++..+++++.+++++++++|+++++||.... ..|+|++|||+.+++++|.+++||+|
T Consensus 316 ~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiF 395 (503)
T 3iwj_A 316 KWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVF 395 (503)
T ss_dssp HHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCCSSSCCCCEEEESCCTTSHHHHSCCC
T ss_pred HHHHhccCCCCCCCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCccCCCCceeCCeeeecCCCCchhhCceee
Confidence 9999999999999999999999999999999999999999999999998654 47999999999999999999999999
Q ss_pred cceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHH
Q 015042 315 GPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLES 394 (414)
Q Consensus 315 gPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~ 394 (414)
|||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|.+|
T Consensus 396 GPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~g 475 (503)
T 3iwj_A 396 GPVLCVKTFSTEEEAIDLANDTVYGLGAAVISNDLERCERVTKAFKAGIVWVNCSQPCFTQAPWGGVKRSGFGRELGEWG 475 (503)
T ss_dssp SSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSSCCCCTTSCBCCSGGGEECCBSHHHH
T ss_pred CceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcccCCCcchHHH
Confidence 99999999999999999999999999999999999999999999999999999987778899999999999999999999
Q ss_pred HHhhheeeEEEeeCCCC--CCC
Q 015042 395 LYKYLQIKSVVTPIYNS--PWL 414 (414)
Q Consensus 395 ~~~~~~~k~i~~~~~~~--~~~ 414 (414)
+++|++.|+|+++.... .||
T Consensus 476 ~~~f~~~k~v~~~~~~~~~~~~ 497 (503)
T 3iwj_A 476 LDNYLSVKQVTQYISEEPWGWY 497 (503)
T ss_dssp HHTTEEEEEEEEECCSSCCCCS
T ss_pred HHHhhCeEEEEEeCCCCccccc
Confidence 99999999999887644 465
No 8
>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*
Probab=100.00 E-value=1.8e-92 Score=719.56 Aligned_cols=410 Identities=53% Similarity=0.935 Sum_probs=388.7
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccCCCcccceeecCCceEEEEcC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTLREPVGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.+++++.++++..+..++...+...+.+++|+|||++|+|
T Consensus 89 L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVV~~I~P 168 (501)
T 1bxs_A 89 LNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIP 168 (501)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECCSSSEEEEEEEEECCEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeeeccCCcceeEEecCCceEEEECC
Confidence 57899999999999999999999999998766799999999999999988776654443344556899999999999999
Q ss_pred CccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCCc
Q 015042 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|++++.+.+.++.|+.||+||+|.||||+
T Consensus 169 wN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~ 248 (501)
T 1bxs_A 169 WNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGST 248 (501)
T ss_dssp SSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCH
T ss_pred CcchHHHHHHHHHHHHHcCCeeeccCCCccHHHHHHHHHHHHHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCH
Confidence 99999999999999999999999999999999999999999999999999999999777899999999999999999999
Q ss_pred HHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHHh
Q 015042 161 DVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240 (414)
Q Consensus 161 ~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~~ 240 (414)
.+|+.|++.+++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++
T Consensus 249 ~~G~~i~~~aa~~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~ 328 (501)
T 1bxs_A 249 EVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAK 328 (501)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhhhccCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEchhHHHHHHHHHHHHHH
Confidence 99999999887578999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecceEEE
Q 015042 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGPVMAL 320 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v 320 (414)
++++|+|.|+++++||+++..+++++.+++++++++|+++++||......|+|++|||+.+++++|.+++||+||||++|
T Consensus 329 ~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v 408 (501)
T 1bxs_A 329 KYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQI 408 (501)
T ss_dssp CCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEE
T ss_pred hcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEecCCCCCHHHhcccccceEEE
Confidence 99999999999999999999999999999999999999999999764346999999999999999999999999999999
Q ss_pred EeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHHHhhhe
Q 015042 321 MKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQ 400 (414)
Q Consensus 321 ~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~~~~~~ 400 (414)
++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++|++
T Consensus 409 ~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~pfGG~k~SG~G~~~G~~~l~~f~~ 488 (501)
T 1bxs_A 409 MKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTE 488 (501)
T ss_dssp EEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCCCCTTSCBCCSGGGEESCBSHHHHHHTTEE
T ss_pred EEeCCHHHHHHHHhcCCCCeeEEEEcCCHHHHHHHHHhcCeeEEEECCCCCCCCCCCCCCcCcCCcCccchHHHHHHhhC
Confidence 99999999999999999999999999999999999999999999999987777889999999999999999999999999
Q ss_pred eeEEEeeCCC
Q 015042 401 IKSVVTPIYN 410 (414)
Q Consensus 401 ~k~i~~~~~~ 410 (414)
.|+|+.+...
T Consensus 489 ~K~v~~~~~~ 498 (501)
T 1bxs_A 489 VKTVTIKISQ 498 (501)
T ss_dssp EEEEEEECSC
T ss_pred eeEEEEccCC
Confidence 9999887643
No 9
>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*
Probab=100.00 E-value=1.3e-92 Score=722.51 Aligned_cols=407 Identities=43% Similarity=0.805 Sum_probs=385.0
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccC----CCcccceeecCCceEE
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS----SELQGYTLREPVGVVG 76 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~----~~~~~~~~~~P~Gvv~ 76 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.+++++.++++..+..++.. .+...+.+++|+|||+
T Consensus 104 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~P~GVV~ 183 (517)
T 2o2p_A 104 LYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCG 183 (517)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHHHGGGCCEEEECCCCCTTSCEEEEEEEEECCEEE
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEecCCccEE
Confidence 578999999999999999999999999986547999999999999999887666544431 2225689999999999
Q ss_pred EEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEE
Q 015042 77 HIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCF 156 (414)
Q Consensus 77 ~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~ 156 (414)
+|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|++++.+.++++.|+.||+||+|.|
T Consensus 184 ~I~PwN~P~~~~~~~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~F 263 (517)
T 2o2p_A 184 IVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGF 263 (517)
T ss_dssp EECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEE
T ss_pred EECCCcchHHHHHHHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999977788999999999999999
Q ss_pred eCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHH
Q 015042 157 TGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLL 236 (414)
Q Consensus 157 tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~ 236 (414)
|||+.+|+.|++.++.++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+
T Consensus 264 TGS~~~G~~I~~~aa~~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~ 343 (517)
T 2o2p_A 264 TGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVV 343 (517)
T ss_dssp ESCHHHHHHHHHHHHHHTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHH
T ss_pred ECCHHHHHHHHHHhHHhcCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeHHHHHHHHHHHH
Confidence 99999999999987646789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecc
Q 015042 237 EKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGP 316 (414)
Q Consensus 237 ~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 316 (414)
+.++++++|+|+++++++||+++..+++++.+++++++++|+++++||......|+|++|||+.+++++|++++||+|||
T Consensus 344 ~~~~~~~vGdp~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGP 423 (517)
T 2o2p_A 344 EEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGP 423 (517)
T ss_dssp HHHTTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSS
T ss_pred HHHHhcCCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccCCCCCCeECCEEEeCCCCCChhhhcccccc
Confidence 99999999999999999999999999999999999999999999999986544699999999999999999999999999
Q ss_pred eEEEEeeCC--HHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHH
Q 015042 317 VMALMKFKT--VEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLES 394 (414)
Q Consensus 317 vl~v~~~~~--~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~ 394 (414)
|++|++|+| +||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|.+|
T Consensus 424 Vl~v~~~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~~ 503 (517)
T 2o2p_A 424 IMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAA 503 (517)
T ss_dssp EEEEEEECTTCSHHHHHHHTCSSCCSCCEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCCGGGEECCBSHHHH
T ss_pred EEEEEEcCCCCHHHHHHHHhcCCCCceEEEeCCCHHHHHHHHHhcCEeEEEECCCCCCCCCCCcCCcCcCCcCccChHHH
Confidence 999999999 999999999999999999999999999999999999999999987777899999999999999999999
Q ss_pred HHhhheeeEEEee
Q 015042 395 LYKYLQIKSVVTP 407 (414)
Q Consensus 395 ~~~~~~~k~i~~~ 407 (414)
+++|+++|+|+++
T Consensus 504 l~~~~~~k~v~~~ 516 (517)
T 2o2p_A 504 LNEYLRIKTVTFE 516 (517)
T ss_dssp HHTTEEEEEEEEE
T ss_pred HHHhCCceEEEee
Confidence 9999999999875
No 10
>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}
Probab=100.00 E-value=8.9e-93 Score=721.63 Aligned_cols=405 Identities=42% Similarity=0.687 Sum_probs=386.6
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccC-CCcccceeecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS-SELQGYTLREPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++.+.++..+...+.. .+...+.+++|+|||++|+
T Consensus 98 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~ 176 (504)
T 3ek1_A 98 LRKWFDLIIANADDIALIMTSEQGKPLAEA-RGEVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAIT 176 (504)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCcccccccccccceeeccCceEEEEEC
Confidence 578999999999999999999999999986 45999999999999999877655544432 3566889999999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCC
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|++++.+.++++.|+.||+||+|.||||
T Consensus 177 PwN~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~t~~~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS 256 (504)
T 3ek1_A 177 PWNFPAAMITRKAAPALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGS 256 (504)
T ss_dssp CSSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESC
T ss_pred CCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999878889999999999999999999
Q ss_pred cHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHH
Q 015042 160 TDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239 (414)
Q Consensus 160 ~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~ 239 (414)
+.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++
T Consensus 257 ~~~G~~i~~~aa-~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~ 335 (504)
T 3ek1_A 257 TEVGRLLMAQCA-PTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKV 335 (504)
T ss_dssp HHHHHHHHHHHG-GGTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhh-hhcCCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEehhHHHHHHHHHHHHH
Confidence 999999999988 8999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecceEE
Q 015042 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGPVMA 319 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~ 319 (414)
+++++|+|.++++++||+++..+++++.+++++++++|+++++||.. ..|+|++|||+.+++++|.+++||+||||++
T Consensus 336 ~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~--~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~ 413 (504)
T 3ek1_A 336 KELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKE--LGGLFFEPGILTGVTSDMLVAKEETFGPLAP 413 (504)
T ss_dssp HTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE--EETTEECCEEEEEECTTSGGGTSCCCSSEEE
T ss_pred hhcccCCCccccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcc--CCCceECCeEEecCCCcChhhcccccCcEEE
Confidence 99999999999999999999999999999999999999999999976 3689999999999999999999999999999
Q ss_pred EEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHHHhhh
Q 015042 320 LMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYL 399 (414)
Q Consensus 320 v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~~~~~ 399 (414)
|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++||
T Consensus 414 v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t 493 (504)
T 3ek1_A 414 LFAFDTEEEVIAQANDTIFGLAAYFYTENFSRAIRVSEALEYGMVGHNTGLISNEVAPFGGVKQSGLGREGSKYGIEEYL 493 (504)
T ss_dssp EEEECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHHHHSCCSEEEESCSCCCCSSSCBCCSGGGEESCBSTTTSGGGGE
T ss_pred EEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCcCcCcCCCCCcHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999998877789999999999999999999999999
Q ss_pred eeeEEEeeCC
Q 015042 400 QIKSVVTPIY 409 (414)
Q Consensus 400 ~~k~i~~~~~ 409 (414)
+.|+|+++.+
T Consensus 494 ~~K~v~~~~g 503 (504)
T 3ek1_A 494 ETKYICSAYK 503 (504)
T ss_dssp EEEEEEEECC
T ss_pred ceEEEEEecC
Confidence 9999988764
No 11
>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...
Probab=100.00 E-value=1.6e-92 Score=719.72 Aligned_cols=409 Identities=52% Similarity=0.888 Sum_probs=387.8
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccCCCcccceeecCCceEEEEcC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTLREPVGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.+++++.++++..+..++...+...+++++|+|||++|+|
T Consensus 88 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~P 167 (500)
T 1o04_A 88 LNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIP 167 (500)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECCSSSEEEEEEEEECCEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCcceecCCCceEEEEEecCCcEEEECC
Confidence 57899999999999999999999999998766799999999999999887766554443334456899999999999999
Q ss_pred CccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCCc
Q 015042 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|++++.+.++++.|+.||+||+|.||||+
T Consensus 168 wN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~ 247 (500)
T 1o04_A 168 WNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGST 247 (500)
T ss_dssp SSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCH
T ss_pred CCchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCH
Confidence 99999999999999999999999999999999999999999999999999999999777899999999999999999999
Q ss_pred HHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHHh
Q 015042 161 DVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240 (414)
Q Consensus 161 ~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~~ 240 (414)
.+|+.|++.+++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++.++
T Consensus 248 ~~G~~i~~~aa~~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~ 327 (500)
T 1o04_A 248 EIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAK 327 (500)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhhcCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCCCEEEEehhHHHHHHHHHHHHHH
Confidence 99999999887578999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecceEEE
Q 015042 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGPVMAL 320 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v 320 (414)
++++|+|.++++++||+++..+++++.+++++++++|+++++||......|+|++|||+.+++++|.+++||+||||++|
T Consensus 328 ~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v 407 (500)
T 1o04_A 328 SRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQI 407 (500)
T ss_dssp HCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEE
T ss_pred hCcCCCcccccCccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEeCCCCCChhhhCcccceEEEE
Confidence 99999999999999999999999999999999999999999999764346999999999999999999999999999999
Q ss_pred EeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHHHhhhe
Q 015042 321 MKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQ 400 (414)
Q Consensus 321 ~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~~~~~~ 400 (414)
++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++|++
T Consensus 408 ~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~f~~ 487 (500)
T 1o04_A 408 LKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTE 487 (500)
T ss_dssp EEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCSGGGEESCBSTGGGGGGGEE
T ss_pred EeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999987777889999999999999999999999999
Q ss_pred eeEEEeeCC
Q 015042 401 IKSVVTPIY 409 (414)
Q Consensus 401 ~k~i~~~~~ 409 (414)
.|+|+.+..
T Consensus 488 ~K~v~~~~~ 496 (500)
T 1o04_A 488 VKTVTVKVP 496 (500)
T ss_dssp EEEEEEECS
T ss_pred eEEEEEecC
Confidence 999988753
No 12
>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*
Probab=100.00 E-value=1.3e-92 Score=719.97 Aligned_cols=406 Identities=35% Similarity=0.638 Sum_probs=388.3
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCccccc-CCCcccceeecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKM-SSELQGYTLREPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.+++++.++++..+...+. ..+...+++++|+|||++|+
T Consensus 90 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~ 169 (498)
T 4f3x_A 90 LLKIADAIEKEADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAPAAGEYLPGHTSMIRRDPIGIVGSIA 169 (498)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECCEEEEEC
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCcccccceEEEcCcceEEEEC
Confidence 57899999999999999999999999998746799999999999999988766554432 24567889999999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCC
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|+++..+++++.++ +|+|++|++++++.++++.|+.||+||+|.||||
T Consensus 170 PwN~P~~~~~~~~a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~ea-lP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS 248 (498)
T 4f3x_A 170 PWNYPLMMMAWKLAPAIGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGMVSITGD 248 (498)
T ss_dssp CSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHTT-SCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESC
T ss_pred CCchHHHHHHHHHHHHHHcCCeEEEECCcccHHHHHHHHHHHHHh-CCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECC
Confidence 999999999999999999999999999999999999999999999 9999999999988889999999999999999999
Q ss_pred cHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHH
Q 015042 160 TDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239 (414)
Q Consensus 160 ~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~ 239 (414)
+.+|+.|++.++ +++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++
T Consensus 249 ~~~G~~i~~~aa-~~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~ 327 (498)
T 4f3x_A 249 IATGKKVLAAAA-KTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAV 327 (498)
T ss_dssp HHHHHHHHHHHH-TTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCEEEEEEETTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-hhCCceeecCCCCCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCCceEEecHHHHHHHHHHHHHHH
Confidence 999999999998 8999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCC-EEEeCCcccCCCCceeeeEEEeeCCCcccccccceecceE
Q 015042 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGA-TLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGPVM 318 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga-~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl 318 (414)
+++++|+|.|+++++||+++..+++++.+++++++++|+ ++++||...+..|+|++|||+.+++++|.+++||+||||+
T Consensus 328 ~~~~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl 407 (498)
T 4f3x_A 328 STIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVV 407 (498)
T ss_dssp TTCCCSCSSGGGCSSCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSBCCSSSCCBCCEEEESCCTTSHHHHSCCCSSEE
T ss_pred HhcccCCCccccCccccCcCHHHHHHHHHHHHHHHHCCCCEEEECCccCCCCCcEECCEEeecCCCCChhhCCceeCcEE
Confidence 999999999999999999999999999999999999999 9999998755689999999999999999999999999999
Q ss_pred EEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHHHhh
Q 015042 319 ALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKY 398 (414)
Q Consensus 319 ~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~~~~ 398 (414)
+|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|.+|+++|
T Consensus 408 ~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~~l~~~ 487 (498)
T 4f3x_A 408 SVTRFTGKDDAVAWANDSDYGLASSVWTKDISKAMRAASRLQYGCTWINTHFMLTNEMPHGGIKQSGYGKDMSVYALEDY 487 (498)
T ss_dssp EEEEECTTSCHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCCTTSCBCCSGGGEECCBSHHHHHHHT
T ss_pred EEEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcCCcCccchHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999988778999999999999999999999999
Q ss_pred heeeEEEeeC
Q 015042 399 LQIKSVVTPI 408 (414)
Q Consensus 399 ~~~k~i~~~~ 408 (414)
|+.|+|+++.
T Consensus 488 t~~k~v~~~~ 497 (498)
T 4f3x_A 488 TAVRHIMINH 497 (498)
T ss_dssp EEEEEEEEEC
T ss_pred hceEEEEEeC
Confidence 9999998875
No 13
>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=4.6e-92 Score=716.14 Aligned_cols=406 Identities=41% Similarity=0.662 Sum_probs=385.8
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccCCCcccceeecCCceEEEEcC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTLREPVGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.+++++.++++..+..++...+...+.+++|+|||++|+|
T Consensus 76 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~P 155 (495)
T 3b4w_A 76 IAAAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETRTGSYGQSIVSREPVGVVGAIVA 155 (495)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHTCGGGSCSEEEEEETTEEEEEEEEECCEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCceEEEEEccCceEEEECC
Confidence 57899999999999999999999999998654799999999999999888776655443333456899999999999999
Q ss_pred CccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCCc
Q 015042 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|++++ +.+.++.|+.||+||+|.||||+
T Consensus 156 wN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g-~~~~g~~L~~~~~v~~I~FTGS~ 234 (495)
T 3b4w_A 156 WNVPLFLAVNKIAPALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSS 234 (495)
T ss_dssp SSSHHHHHHHHHHHHHHTTCEEEEECBTTSCHHHHHHHHHHHHTTCCTTSEEECCB-SHHHHHHHTTCTTCCEEEEESCH
T ss_pred CcchHHHHHHHHHHHHHcCCEEEEecCCccHHHHHHHHHHHHHhCCCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEeCCH
Confidence 99999999999999999999999999999999999999999999999999999999 88899999999999999999999
Q ss_pred HHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHHh
Q 015042 161 DVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240 (414)
Q Consensus 161 ~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~~ 240 (414)
.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++
T Consensus 235 ~~G~~i~~~aa-~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~ 313 (495)
T 3b4w_A 235 AVGREVGRRAA-EMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVT 313 (495)
T ss_dssp HHHHHHHHHHH-HTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhh-hcCCceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccHHHHHHHHHHHHHH
Confidence 99999999988 88999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC--CCCceeeeEEEeeCCCcccccccceecceE
Q 015042 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG--DKGYYIEPTIFTNVKEDMIIAKEEIFGPVM 318 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl 318 (414)
++++|+|.++++++||+++..+++++.+++++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||+
T Consensus 314 ~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl 393 (495)
T 3b4w_A 314 ALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVL 393 (495)
T ss_dssp HSCBCCTTCTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEE
T ss_pred hcCCCCCccCCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEecCcccccccCCceeCCEEecCCCCCChhhhcccccceE
Confidence 999999999999999999999999999999999999999999997643 368999999999999999999999999999
Q ss_pred EEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHHHhh
Q 015042 319 ALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKY 398 (414)
Q Consensus 319 ~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~~~~ 398 (414)
+|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++. ..+.+||||+|.||+|+++|++|+++|
T Consensus 394 ~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~-~~~~~PfGG~k~SG~Gr~~G~~gl~~~ 472 (495)
T 3b4w_A 394 AIIPYDTEEDAIAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYGINWYA-FDPGSPFGGYKNSGIGRENGPEGVEHF 472 (495)
T ss_dssp EEEEESSHHHHHHHHHCSSCCSCCEEECSCHHHHHHHHHHSCCSCCEESSCC-CCTTSCBCCSGGGEESCBSHHHHHHTT
T ss_pred EEEecCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCEeEEEECCCC-CCCCCCCCCCCCCCcCccchHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999987 778999999999999999999999999
Q ss_pred heeeEEEeeCC
Q 015042 399 LQIKSVVTPIY 409 (414)
Q Consensus 399 ~~~k~i~~~~~ 409 (414)
+++|+|+.+..
T Consensus 473 ~~~k~v~~~~~ 483 (495)
T 3b4w_A 473 TQQKSVLLPMG 483 (495)
T ss_dssp EEEEEEECCTT
T ss_pred cceeEEEEccC
Confidence 99999988754
No 14
>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}
Probab=100.00 E-value=5.3e-92 Score=716.55 Aligned_cols=408 Identities=36% Similarity=0.608 Sum_probs=386.6
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccC-CCcccceeecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS-SELQGYTLREPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++. .|+..+++.+++++.++++..+...+.. .+...+.+++|+|||++|+
T Consensus 78 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~ 156 (497)
T 3k2w_A 78 LRTFANKIRENKHILAPMLVAEQGKLLSVAE-MEVDVTATFIDYGCDNALTIEGDILPSDNQDEKIYIHKVPRGVVVGIT 156 (497)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHTTTTCCEEEEECSSTTEEEEEEEEECSEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCceEEEEC
Confidence 5789999999999999999999999999865 6999999999999999887766544432 4567889999999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCC
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|++++++.++++.|+.||+||+|+||||
T Consensus 157 PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS 236 (497)
T 3k2w_A 157 AWNFPLALAGRKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGS 236 (497)
T ss_dssp CSSSHHHHHHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESC
T ss_pred CCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECc
Confidence 99999999999999999999999999999999999999999999999999999999988889999999999999999999
Q ss_pred cHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHH
Q 015042 160 TDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239 (414)
Q Consensus 160 ~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~ 239 (414)
+.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++
T Consensus 237 ~~~G~~i~~~aa-~~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~ 315 (497)
T 3k2w_A 237 TVAGKQIYKTSA-EYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLV 315 (497)
T ss_dssp HHHHHHHHHHHT-TTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhh-hcCCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeHHHHHHHHHHHHHHH
Confidence 999999999988 8899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcc--cCC--CCceeeeEEEeeCCCcccccccceec
Q 015042 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKP--IGD--KGYYIEPTIFTNVKEDMIIAKEEIFG 315 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~--~~~--~g~~~~Ptvl~~~~~~~~~~~~E~fg 315 (414)
+++++|+|.++++++||+++..+++++.+++++++++|+++++||.. .+. .|+|+.|||+.+++++|++++||+||
T Consensus 316 ~~~~vg~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFG 395 (497)
T 3k2w_A 316 KGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFG 395 (497)
T ss_dssp HTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCS
T ss_pred HhccCCCCCCCCCccccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccC
Confidence 99999999999999999999999999999999999999999999973 222 68999999999999999999999999
Q ss_pred ceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHH
Q 015042 316 PVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESL 395 (414)
Q Consensus 316 Pvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~ 395 (414)
||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++|+
T Consensus 396 PVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~k~SG~G~~~G~~gl 475 (497)
T 3k2w_A 396 PILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQSFANINQAISDLEVGEVYINRGMGEQHQGFHNGWKQSGFGGEDGKFGL 475 (497)
T ss_dssp SEEEEEEESCHHHHHHHHTCSSEESEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCCTTSCBCCEETSEESCBSHHHHH
T ss_pred cEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEEcCCCCCCCCCCcCCcCCCcCCccchHHHH
Confidence 99999999999999999999999999999999999999999999999999999988888999999999999999999999
Q ss_pred HhhheeeEEEeeCCC
Q 015042 396 YKYLQIKSVVTPIYN 410 (414)
Q Consensus 396 ~~~~~~k~i~~~~~~ 410 (414)
++||++|+|+.+++.
T Consensus 476 ~~ft~~k~v~~~~~~ 490 (497)
T 3k2w_A 476 EQYLEKKTVYINEAE 490 (497)
T ss_dssp HTTEEEEEEEEECCC
T ss_pred HHhcceEEEEEEccc
Confidence 999999999988753
No 15
>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=2.3e-91 Score=714.20 Aligned_cols=406 Identities=43% Similarity=0.706 Sum_probs=385.8
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCccccc-CCCcccceeecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKM-SSELQGYTLREPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++. .|+..+++.+++++.++++..+..++. ..+...+++++|+|||++|+
T Consensus 92 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~ 170 (515)
T 2d4e_A 92 LLRIAELIEKHADELAVMECLDAGQVLRIVR-AQVARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPVGIIT 170 (515)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTTGGGTTCEEECCBTTTEEEEEEEEECCCEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecCCceEEEC
Confidence 5789999999999999999999999999875 799999999999999888776654443 23455788999999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCC
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|++++++.++++.|+.||+||+|+||||
T Consensus 171 PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS 250 (515)
T 2d4e_A 171 PWNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGE 250 (515)
T ss_dssp CSSSHHHHHHHHHHHHHHTTCCEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESC
T ss_pred CCCchhhhhhhhhhHHHHcCCeeeecCCCCcHHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCc
Confidence 99999999999999999999999999999999999999999999999999999999977788999999999999999999
Q ss_pred cHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHH
Q 015042 160 TDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239 (414)
Q Consensus 160 ~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~ 239 (414)
+.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++
T Consensus 251 ~~~G~~I~~~aa-~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~ 329 (515)
T 2d4e_A 251 TETGKIVMRNAA-DHLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERA 329 (515)
T ss_dssp HHHHHHHHHHHG-GGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-hcCCceEecCCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhHHHHHHHHHHHHH
Confidence 999999999988 8899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC--------CCCceeeeEEEeeCCCccccccc
Q 015042 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG--------DKGYYIEPTIFTNVKEDMIIAKE 311 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~--------~~g~~~~Ptvl~~~~~~~~~~~~ 311 (414)
+++++|+|.++++++||+++..+++++.+++++++++|+++++||.... ..|+|++|||+.+ +++|.+++|
T Consensus 330 ~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~e 408 (515)
T 2d4e_A 330 RAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQE 408 (515)
T ss_dssp HHCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHS
T ss_pred hhcccCCcccccCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccccccccCCCceeCCEEEeC-CCCChhhhc
Confidence 9999999999999999999999999999999999999999999997643 2699999999999 999999999
Q ss_pred ceecceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccch
Q 015042 312 EIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYG 391 (414)
Q Consensus 312 E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g 391 (414)
|+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|
T Consensus 409 EiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G 488 (515)
T 2d4e_A 409 EIFGPVLVAIPFKDEEEALRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVYLNSHNVRHLPTPFGGVKGSGDRREGG 488 (515)
T ss_dssp CCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSSCCCCTTSCBCCSGGGBCSCBSH
T ss_pred cccCCceEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCcCCCCCCccch
Confidence 99999999999999999999999999999999999999999999999999999999987777899999999999999999
Q ss_pred HHHHHhhheeeEEEeeCC
Q 015042 392 LESLYKYLQIKSVVTPIY 409 (414)
Q Consensus 392 ~~~~~~~~~~k~i~~~~~ 409 (414)
++|+++|+++|+|+.+..
T Consensus 489 ~~gl~~~~~~K~v~~~~~ 506 (515)
T 2d4e_A 489 TYALDFYTDLKTIALPLR 506 (515)
T ss_dssp HHHHHHHEEEEEEEEESS
T ss_pred HHHHHHhCceeEEEEcCC
Confidence 999999999999988764
No 16
>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*
Probab=100.00 E-value=1.1e-91 Score=714.67 Aligned_cols=407 Identities=39% Similarity=0.738 Sum_probs=386.0
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccCCCcccceeecCCceEEEEcC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTLREPVGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++.++++..++.++...+...+++++|+|||++|+|
T Consensus 86 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~P 164 (503)
T 1a4s_A 86 MLEAARIIRERRDNIAKLEVINNGKTITEA-EYDIDAAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREPLGVCAGILA 164 (503)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHGGGCCEEEEECGGGCEEEEEEEECSEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCCcccCCCCceeEEEEecCceEEEECC
Confidence 578999999999999999999999999986 5699999999999999988766554443334457889999999999999
Q ss_pred CccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCCc
Q 015042 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|++++.+ ++++.|+.||+||+|.||||+
T Consensus 165 wN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~~aGlP~gvv~vv~g~~-~~g~~L~~~p~v~~V~FTGS~ 243 (503)
T 1a4s_A 165 WNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGA-ETGSLLCHHPNVAKVSFTGSV 243 (503)
T ss_dssp SSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSH-HHHHHHHHCTTCCEEEEESCH
T ss_pred CcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEecCc-hHHHHHHhCCCcCEEEEeCCH
Confidence 9999999999999999999999999999999999999999999999999999999977 889999999999999999999
Q ss_pred HHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHHh
Q 015042 161 DVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240 (414)
Q Consensus 161 ~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~~ 240 (414)
.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++.++
T Consensus 244 ~~G~~i~~~aa-~~~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~ 322 (503)
T 1a4s_A 244 PTGKKVMEMSA-KTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTK 322 (503)
T ss_dssp HHHHHHHHHHH-TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhh-hcCCceEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEehHHHHHHHHHHHHHHH
Confidence 99999999998 89999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccc--C----CCCceeeeEEEeeCCCccccccccee
Q 015042 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPI--G----DKGYYIEPTIFTNVKEDMIIAKEEIF 314 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~--~----~~g~~~~Ptvl~~~~~~~~~~~~E~f 314 (414)
++++|+|.++++++||+++..+++++.+++++++++|+++++||... . ..|+|++|||+.+++++|++++||+|
T Consensus 323 ~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiF 402 (503)
T 1a4s_A 323 AIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIF 402 (503)
T ss_dssp TCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCC
T ss_pred hcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhcccc
Confidence 99999999999999999999999999999999999999999999764 2 36899999999999999999999999
Q ss_pred cceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHH
Q 015042 315 GPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLES 394 (414)
Q Consensus 315 gPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~ 394 (414)
|||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++|
T Consensus 403 GPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~G~~~G~~~ 482 (503)
T 1a4s_A 403 GPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQAT 482 (503)
T ss_dssp SSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCCCCTTSCBCCSGGGEECCBSTTGG
T ss_pred CceEEEEecCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHHCceeEEEECCCCCCCCCCCCCCcCCCCCCccchHHH
Confidence 99999999999999999999999999999999999999999999999999999988777889999999999999999999
Q ss_pred HHhhheeeEEEeeCCC
Q 015042 395 LYKYLQIKSVVTPIYN 410 (414)
Q Consensus 395 ~~~~~~~k~i~~~~~~ 410 (414)
+++|++.|+|+.+.+.
T Consensus 483 l~~f~~~k~v~~~~~~ 498 (503)
T 1a4s_A 483 VDYYSQLKTVIVEMGD 498 (503)
T ss_dssp GGGSEEEEEEEECCSC
T ss_pred HHHhcCceEEEEccCC
Confidence 9999999999887643
No 17
>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=3.9e-92 Score=719.00 Aligned_cols=408 Identities=40% Similarity=0.717 Sum_probs=384.4
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhh----hcCcccccCCCcccceeecCCceEE
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADK----IHGEVLKMSSELQGYTLREPVGVVG 76 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~----~~~~~~~~~~~~~~~~~~~P~Gvv~ 76 (414)
|+++++.|++|+++|++++++|+|||..++ |+..+++.+++++.+.++ +.+...+...+. .+.+++|+|||+
T Consensus 80 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea---ev~~~~~~~~~~a~~~~~~~~~~~g~~~~~~~~~-~~~~~~P~GVV~ 155 (517)
T 3r31_A 80 LKRAADIMRERNDALSTLETLDTGKPIQET---IVADPTSGADAFEFFGGIAPSALNGDYIPLGGDF-AYTKRVPLGVCV 155 (517)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHH---HHHSHHHHHHHHHHHHHHHHHHTCCCEEECSSSE-EEEEEEECSEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHH---HHHHHHHHHHHHHHHhhhccccccCcccccCCCc-ceEEEcCccEEE
Confidence 578999999999999999999999999975 999999999999998877 666555443455 899999999999
Q ss_pred EEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEE
Q 015042 77 HIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCF 156 (414)
Q Consensus 77 ~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~ 156 (414)
+|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|++++ +.+.++.|+.||+||+|+|
T Consensus 156 ~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~eaGlP~gvv~vv~g-~~~~g~~L~~~p~vd~I~F 234 (517)
T 3r31_A 156 GIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQG-DRDTGPLLVNHPDVAKVSL 234 (517)
T ss_dssp EECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHHTTCCTTSEEECCC-CTTHHHHHHTCTTEEEEEE
T ss_pred EECCCcchHHHHHHHHHHHHHcCCEEEEEcCcccHHHHHHHHHHHHHhCcCcccEEEEEC-CHHHHHHHHhCCCcCEEec
Confidence 999999999999999999999999999999999999999999999999999999999999 7889999999999999999
Q ss_pred eCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHH
Q 015042 157 TGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLL 236 (414)
Q Consensus 157 tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~ 236 (414)
|||+.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+
T Consensus 235 TGS~~~G~~i~~~aa-~~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~ 313 (517)
T 3r31_A 235 TGSVPTGRKVAAAAA-GHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLK 313 (517)
T ss_dssp ESCHHHHHHHHHHHH-HTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGGHHHHHHHHH
T ss_pred cCCHHHHHHHHHHhh-cCCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHhcCCCceeccCceEEEeHHHHHHHHHHHH
Confidence 999999999999988 8899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC---CCCceeeeEEEeeCCCcccccccce
Q 015042 237 EKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG---DKGYYIEPTIFTNVKEDMIIAKEEI 313 (414)
Q Consensus 237 ~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~ 313 (414)
++++++++|+|.++++++||+++..+++++.++|++++++|+++++||...+ ..|+|+.|||+.+++++|++++||+
T Consensus 314 ~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEi 393 (517)
T 3r31_A 314 RRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEI 393 (517)
T ss_dssp HHHHHCCBCCTTSTTCSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECCSCCSSCCSSSBCCCCEEEEEECTTSHHHHSCC
T ss_pred HHHHhccCCCCCCcCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEECCccCcccCCCCceECCEEEecCCCCCcccccee
Confidence 9999999999999999999999999999999999999999999999993121 3799999999999999999999999
Q ss_pred ecceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHH
Q 015042 314 FGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLE 393 (414)
Q Consensus 314 fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~ 393 (414)
||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++
T Consensus 394 FGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~ 473 (517)
T 3r31_A 394 FGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLWINTYNLCPVEIPFGGSKQSGFGRENSAA 473 (517)
T ss_dssp SSSEEEEEEECCHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHSCCSEEEESSCCCCCTTSCBCCEETTEECCBSTGG
T ss_pred eccEEEEEEeCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHHCCcceEEECCCCCCCCCCCcCCcCcCCCCcCchHH
Confidence 99999999999999999999999999999999999999999999999999999998888889999999999999999999
Q ss_pred HHHhhheeeEEEeeCC--CCCCC
Q 015042 394 SLYKYLQIKSVVTPIY--NSPWL 414 (414)
Q Consensus 394 ~~~~~~~~k~i~~~~~--~~~~~ 414 (414)
|+++||+.|+|+++.+ ..||+
T Consensus 474 gl~~ft~~K~v~~~~~~~~~~~~ 496 (517)
T 3r31_A 474 ALEHYSELKTVYVSTGKVDAPYA 496 (517)
T ss_dssp GGGGSEEEEEEEECCC-------
T ss_pred HHHHhhceEEEEEcCCCCCCCch
Confidence 9999999999988765 34553
No 18
>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}
Probab=100.00 E-value=3.3e-91 Score=709.00 Aligned_cols=405 Identities=39% Similarity=0.670 Sum_probs=386.1
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccC-CCcccceeecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS-SELQGYTLREPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++....+..+...+.. .+...+.+++|+|||++|+
T Consensus 75 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~ 153 (481)
T 3jz4_A 75 LRNWFNLMMEHQDDLARLMTLEQGKPLAEA-KGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAIT 153 (481)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHGGGCCEEEECCSSTTEEEEEEEEECCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCccccccCCCceEEEEEcCccEEEEEC
Confidence 578999999999999999999999999976 46999999999999998876655544432 4566789999999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCC
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|+++..+.+++.++|+|+|++|++++++.+.++.|+.||+||+|.||||
T Consensus 154 PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS 233 (481)
T 3jz4_A 154 PWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGS 233 (481)
T ss_dssp CSSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESC
T ss_pred CCcchHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999988889999999999999999999
Q ss_pred cHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHH
Q 015042 160 TDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239 (414)
Q Consensus 160 ~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~ 239 (414)
+.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|++++
T Consensus 234 ~~~g~~i~~~aa-~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~ 312 (481)
T 3jz4_A 234 TEIGRQLMEQCA-KDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAM 312 (481)
T ss_dssp HHHHHHHHHHHT-TTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-hcCCceEEecCCCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCCcEEEEeHHHHHHHHHHHHHHH
Confidence 999999999988 8999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecceEE
Q 015042 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGPVMA 319 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~ 319 (414)
+++++|+|.++++++||+++..+++++++++++++++|+++++||...+..|+|++|||+.+++++|.+++||+||||++
T Consensus 313 ~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~ 392 (481)
T 3jz4_A 313 SKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAP 392 (481)
T ss_dssp TTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEESCCTTSGGGTSCCCSSEEE
T ss_pred HhccCCCCccCcCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeccEEEecCCCCcccccccccCceEE
Confidence 99999999999999999999999999999999999999999999987545689999999999999999999999999999
Q ss_pred EEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHHHhhh
Q 015042 320 LMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYL 399 (414)
Q Consensus 320 v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~~~~~ 399 (414)
|++|+|+||||+++|+++|||++||||+|.+.++++++++++|.|+||++....+.+||||+|.||+|+++|++|+++||
T Consensus 393 v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~g~~~~t 472 (481)
T 3jz4_A 393 LFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYL 472 (481)
T ss_dssp EEEECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCSSSCBCCSGGGEESCBSHHHHHHTTE
T ss_pred EEEECCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCcCCcccCcCCCCchHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999998888889999999999999999999999999
Q ss_pred eeeEEEee
Q 015042 400 QIKSVVTP 407 (414)
Q Consensus 400 ~~k~i~~~ 407 (414)
+.|+|++.
T Consensus 473 ~~k~v~~~ 480 (481)
T 3jz4_A 473 EIKYMCIG 480 (481)
T ss_dssp EEEEEEEE
T ss_pred ceeEEEEe
Confidence 99999875
No 19
>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A
Probab=100.00 E-value=2.7e-91 Score=716.00 Aligned_cols=407 Identities=34% Similarity=0.578 Sum_probs=384.2
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHh-hhhhcCcccccCCCcccceeecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGA-ADKIHGEVLKMSSELQGYTLREPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~-~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++. .|+..+++.+++++.+ .+...++..+...+...+.+++|+|||++|+
T Consensus 102 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~ 180 (538)
T 3qan_A 102 LVKAAAIIRRRKHEFSAWLVHEAGKPWKEAD-ADTAEAIDFLEYYARQMIELNRGKEILSRPGEQNRYFYTPMGVTVTIS 180 (538)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHTCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHTCBCCCCCTTEEEEEEEEECCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCeeecccCCcceeeecCCCcEEEEEC
Confidence 5789999999999999999999999999865 5999999999999998 5555555554434567889999999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCC
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|+++..+.+++.++|+|+|++|++++++.++++.|+.||+||+|.||||
T Consensus 181 PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS 260 (538)
T 3qan_A 181 PWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGS 260 (538)
T ss_dssp CSTTTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESC
T ss_pred CCchHHHHHHHHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999988889999999999999999999
Q ss_pred cHHHHHHHHHHHhcc------cceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHH
Q 015042 160 TDVGRLVMQAAAASN------LKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEK 233 (414)
Q Consensus 160 ~~~g~~i~~~~a~~~------~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~ 233 (414)
+.+|+.|++.++ .+ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|++
T Consensus 261 ~~~G~~i~~~aa-~~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~ 339 (538)
T 3qan_A 261 KDVGVRLYERAA-VVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLE 339 (538)
T ss_dssp HHHHHHHHHHHT-SCCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEETTTHHHHHH
T ss_pred HHHHHHHHHHhh-hccccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCccCceeEEehHHHHHHHH
Confidence 999999999987 66 89999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccce
Q 015042 234 KLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEI 313 (414)
Q Consensus 234 ~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~ 313 (414)
+|++.++++++|+|.++++++||+++..+++++.+++++++++| ++++||......|+|++|||+.+++++|.+++||+
T Consensus 340 ~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G-~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEi 418 (538)
T 3qan_A 340 KTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEI 418 (538)
T ss_dssp HHHHHHTTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EEEECCCEECSSSCEECCEEEESCCTTSHHHHSCC
T ss_pred HHHHHHHhccCCCCCCCCCCCcCccCHHHHHHHHHHHHHHHHCC-eEEeCCCcCCCCCceeCCeeeecCCCCChhhCCCc
Confidence 99999999999999999999999999999999999999999999 99999987544799999999999999999999999
Q ss_pred ecceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEc-CcCCC-CCCCCcccCCCCCCC-ccc
Q 015042 314 FGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWIN-CYFGF-SMDCPYGGYKMSGFG-REY 390 (414)
Q Consensus 314 fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN-~~~~~-~~~~p~gG~~~sG~g-~~~ 390 (414)
||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+|| ++... .+.+||||+|.||+| +++
T Consensus 419 FGPVl~V~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~~PfGG~k~SG~G~~~~ 498 (538)
T 3qan_A 419 FGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAG 498 (538)
T ss_dssp CSSEEEEEEESSHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHCCCSEEEESSCSCCCCTTTSCBCCEETTBSCCCBT
T ss_pred CCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCCCcCCcCcCCCCcccc
Confidence 999999999999999999999999999999999999999999999999999999 55554 788999999999999 999
Q ss_pred hHHHHHhhheeeEEEeeCCC
Q 015042 391 GLESLYKYLQIKSVVTPIYN 410 (414)
Q Consensus 391 g~~~~~~~~~~k~i~~~~~~ 410 (414)
|++|+++|++.|+|+++...
T Consensus 499 G~~gl~~ft~~k~v~~~~~~ 518 (538)
T 3qan_A 499 GPDYLALHMQAKTVSEMYAE 518 (538)
T ss_dssp STTTGGGGEEEEEEEEEC--
T ss_pred cHHHHHHhhCeEEEEEecCC
Confidence 99999999999999887653
No 20
>2ve5_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wme_A* 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=4.6e-91 Score=709.91 Aligned_cols=409 Identities=45% Similarity=0.771 Sum_probs=390.0
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccCCCcccceeecCCceEEEEcC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTLREPVGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.+++++++.++..+...+...+...+.+++|+|||++|+|
T Consensus 72 L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p 151 (490)
T 2ve5_A 72 LRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGA 151 (490)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEEETTEEEEEEEEECSEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceeeEeeccccEEEEECC
Confidence 57899999999999999999999999998754599999999999999988776555544456678899999999999999
Q ss_pred CccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCCc
Q 015042 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..|.+++.++|+|+|+++++++++.+.++.|+.||+||+|+||||+
T Consensus 152 wN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~p~vd~v~fTGS~ 231 (490)
T 2ve5_A 152 WNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGT 231 (490)
T ss_dssp SSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCH
T ss_pred CcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCChHHHHHHHhCCCcCEEEEeCCc
Confidence 99999999999999999999999999999999999999999999999999999999888899999999999999999999
Q ss_pred HHHHHHHHHH-HhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHH
Q 015042 161 DVGRLVMQAA-AASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239 (414)
Q Consensus 161 ~~g~~i~~~~-a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~ 239 (414)
.+|+.|++.+ + ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|++++
T Consensus 232 ~~g~~i~~~a~a-~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~ 310 (490)
T 2ve5_A 232 STGKKVMASASS-SSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERV 310 (490)
T ss_dssp HHHHHHHHHHHH-HHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHhchh-ccccceEEEcCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCccCCCeEEEcHHHHHHHHHHHHHHH
Confidence 9999999998 6 8899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC----CCCceeeeEEEeeCCCcccccccceec
Q 015042 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG----DKGYYIEPTIFTNVKEDMIIAKEEIFG 315 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fg 315 (414)
+++++|+|.|+++++||+++..+++++.+++++++++|+++++||.... ..|+|++|||+.+++++|++++||+||
T Consensus 311 ~~~~~g~p~d~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFG 390 (490)
T 2ve5_A 311 QRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFG 390 (490)
T ss_dssp HTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCS
T ss_pred HhccCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceEccEEEecCCCCCccccceeeC
Confidence 9999999999999999999999999999999999999999999997632 368999999999999999999999999
Q ss_pred ceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHH
Q 015042 316 PVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESL 395 (414)
Q Consensus 316 Pvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~ 395 (414)
||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|.+++
T Consensus 391 Pvl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~pfGG~k~SG~G~~~G~~~~ 470 (490)
T 2ve5_A 391 PVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTL 470 (490)
T ss_dssp SEEEEEEESCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBSHHHHH
T ss_pred CeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCCCCCCCCcchHHHH
Confidence 99999999999999999999999999999999999999999999999999999887788999999999999999999999
Q ss_pred HhhheeeEEEeeCCC
Q 015042 396 YKYLQIKSVVTPIYN 410 (414)
Q Consensus 396 ~~~~~~k~i~~~~~~ 410 (414)
++|++.|+|+++.++
T Consensus 471 ~~f~~~k~v~~~~~~ 485 (490)
T 2ve5_A 471 AHYTRIKSVQVELGD 485 (490)
T ss_dssp HTTEEEEEEEEECSC
T ss_pred HHhheeEEEEEccCc
Confidence 999999999988764
No 21
>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A
Probab=100.00 E-value=3.9e-91 Score=708.74 Aligned_cols=404 Identities=37% Similarity=0.642 Sum_probs=383.0
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccC-CCcccceeecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS-SELQGYTLREPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.+++++.++++..++.++.. .+...+++++|+|||++|+
T Consensus 88 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~ 167 (495)
T 1wnd_A 88 LLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIA 167 (495)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEeeecCCeEEEEC
Confidence 578999999999999999999999999986544999999999999998877665544432 2345688999999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCC
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|+++..+++++.++ +|+|++|++++.+.+.++.|+.||+||+|+||||
T Consensus 168 PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~ea-lP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS 246 (495)
T 1wnd_A 168 PWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGS 246 (495)
T ss_dssp CSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESC
T ss_pred CCcchHHHHHHHHHHHHHcCCeeEeeCCCCChHHHHHHHHHHHHh-CCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECc
Confidence 999999999999999999999999999999999999999999999 9999999999977788999999999999999999
Q ss_pred cHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHH
Q 015042 160 TDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239 (414)
Q Consensus 160 ~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~ 239 (414)
+.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++.+
T Consensus 247 ~~~G~~i~~~aa-~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~ 325 (495)
T 1wnd_A 247 IATGEHIISHTA-SSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAV 325 (495)
T ss_dssp HHHHHHHHHHHG-GGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-hcCCccccccCCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCCcEEEecchhHHHHHHHHHHHH
Confidence 999999999988 8899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcC-CEEEeCCc-ccCCCCceeeeEEEeeCCCcccccccceecce
Q 015042 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREG-ATLLTGGK-PIGDKGYYIEPTIFTNVKEDMIIAKEEIFGPV 317 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~g-a~v~~gg~-~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv 317 (414)
+++++|+|.++++++||+++..+++++.+++++++++| +++++||. .. +.|+|++|||+.+++++|++++||+||||
T Consensus 326 ~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPV 404 (495)
T 1wnd_A 326 ATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRK-GNGYYYAPTLLAGALQDDAIVQKEVFGPV 404 (495)
T ss_dssp HTCCBCCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCS-SSSCCBCCEEEECCCTTSHHHHSCCCSSE
T ss_pred HhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcccC-CCCCeeCCEEEeCCCCCChhhhccccCce
Confidence 99999999999999999999999999999999999999 99999997 43 36999999999999999999999999999
Q ss_pred EEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHHHh
Q 015042 318 MALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYK 397 (414)
Q Consensus 318 l~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~~~ 397 (414)
++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++
T Consensus 405 l~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ 484 (495)
T 1wnd_A 405 VSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLED 484 (495)
T ss_dssp EEEEEECCHHHHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCCCCTTSCBCCSGGGEECCBSHHHHHHT
T ss_pred EEEEEeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCCcCcCCccchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999987777899999999999999999999999
Q ss_pred hheeeEEEee
Q 015042 398 YLQIKSVVTP 407 (414)
Q Consensus 398 ~~~~k~i~~~ 407 (414)
||++|+|+.+
T Consensus 485 f~~~k~v~~~ 494 (495)
T 1wnd_A 485 YTVVRHVMVK 494 (495)
T ss_dssp TEEEEEEEEE
T ss_pred hhCeEEEEec
Confidence 9999999865
No 22
>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*
Probab=100.00 E-value=5.1e-91 Score=707.29 Aligned_cols=405 Identities=35% Similarity=0.607 Sum_probs=383.9
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccC-CCcccceeecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS-SELQGYTLREPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++. .|+..+++.+++++.++++..+...+.. .+...+.+++|+|||++|+
T Consensus 72 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~ 150 (479)
T 2imp_A 72 LRKISAGIRERASEISALIVEEGGKIQQLAE-VEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGIL 150 (479)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTTTTTCCCEEECCSSTTEEEEEEEEECSEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhhCCccccCCCCceeEEEEeccceEEEEC
Confidence 5789999999999999999999999999864 7999999999999998877655543332 3446789999999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCC
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|+++++++++.++++.|+.||+||+|.||||
T Consensus 151 PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS 230 (479)
T 2imp_A 151 PWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGS 230 (479)
T ss_dssp CSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESC
T ss_pred CCchHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCC
Confidence 99999999999999999999999999999999999999999999999999999999977778999999999999999999
Q ss_pred cHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHH
Q 015042 160 TDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239 (414)
Q Consensus 160 ~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~ 239 (414)
+.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|++++
T Consensus 231 ~~~g~~i~~~aa-~~~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~ 309 (479)
T 2imp_A 231 VSAGEKIMATAA-KNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAM 309 (479)
T ss_dssp HHHHHHHHHHHH-TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSCSEEEEEGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-ccCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCCcEEEEehhhHHHHHHHHHHHH
Confidence 999999999988 8999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecceE
Q 015042 240 KAWLVGDPFD-PTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGPVM 318 (414)
Q Consensus 240 ~~~~~g~~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl 318 (414)
+++++|+|.+ +++++||+++..+++++.+++++++++|+++++||...+..|+|++|||+.+++++|++++||+||||+
T Consensus 310 ~~~~~g~p~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl 389 (479)
T 2imp_A 310 QAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVL 389 (479)
T ss_dssp HTCCBSCTTTCSSCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCCCSSSCCCCCEEEESCCTTSGGGGSCCCSSEE
T ss_pred HhcccCCccccCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCceECCEEEeCCCCCCHHHhCccCCceE
Confidence 9999999999 999999999999999999999999999999999997643468999999999999999999999999999
Q ss_pred EEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHHHhh
Q 015042 319 ALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKY 398 (414)
Q Consensus 319 ~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~~~~ 398 (414)
+|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++|
T Consensus 390 ~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~ 469 (479)
T 2imp_A 390 PVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEY 469 (479)
T ss_dssp EEEEESSHHHHHHHHHCSSEESEEEEECCCHHHHHHHHHHCCSSEEEESSCCCCCTTSCBCCEETTEESCBSHHHHHHTT
T ss_pred EEEeeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCEeEEEECCCCCCCCCCCCCCCCCCCCCCCchHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999877778999999999999999999999999
Q ss_pred heeeEEEee
Q 015042 399 LQIKSVVTP 407 (414)
Q Consensus 399 ~~~k~i~~~ 407 (414)
+++|+|+.+
T Consensus 470 ~~~k~v~~~ 478 (479)
T 2imp_A 470 LQTQVVYLQ 478 (479)
T ss_dssp EEEEEEEEE
T ss_pred cCeeEEEec
Confidence 999999764
No 23
>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*
Probab=100.00 E-value=2.4e-91 Score=711.92 Aligned_cols=402 Identities=34% Similarity=0.520 Sum_probs=380.1
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccC--C----CcccceeecCCce
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS--S----ELQGYTLREPVGV 74 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~--~----~~~~~~~~~P~Gv 74 (414)
|+++++.|++|+++|++++++|+|||..++. .|+..+++.+++++.+.++..+...+.. . +...+++++|+||
T Consensus 77 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~P~GV 155 (505)
T 3prl_A 77 LYAWADLLEERKEIIGELIMHEVAKPKKSAI-GEVSRTADIIRHTADEALRLNGETLKGDQFKGGSSKKIALVEREPLGV 155 (505)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHTCCHHHHH-HHHHHHHHHHHHHHHHHHTCCEEEEEGGGSTTTCSSEEEEEEEEECSE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccccccccCCceeEEEEcCCcE
Confidence 5789999999999999999999999999865 5999999999999998877665544332 1 3456889999999
Q ss_pred EEEEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEE
Q 015042 75 VGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYV 154 (414)
Q Consensus 75 v~~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v 154 (414)
|++|+|||||+...++++++||++||+||+|||+.+|+++..|.+++.++|+|+|++|++++.+.++++.|+.||+||+|
T Consensus 156 V~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I 235 (505)
T 3prl_A 156 VLAISPFNYPVNLAAAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMI 235 (505)
T ss_dssp EEEEECSSSTTHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEE
T ss_pred EEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999878899999999999999
Q ss_pred EEeCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHH
Q 015042 155 CFTGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKK 234 (414)
Q Consensus 155 ~~tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~ 234 (414)
.||||+.+|+.|++.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++
T Consensus 236 ~FTGS~~~G~~i~~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~ 312 (505)
T 3prl_A 236 TFTGGTTTGERISEKAK---MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVAN 312 (505)
T ss_dssp EEESCHHHHHHHHHHCC---SSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHH
T ss_pred EEeCCHHHHHHHHHHcc---CCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccCceEEEeHHHHHHHHHH
Confidence 99999999999998864 899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCccccccccee
Q 015042 235 LLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIF 314 (414)
Q Consensus 235 l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~f 314 (414)
|+++++++++|+|. +++++||+++..+++++.+++++++++|+++++||.. .|+|++|||+.+++++|++++||+|
T Consensus 313 l~~~~~~~~~g~p~-~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~---~g~~~~PTvl~~v~~~~~i~~eEiF 388 (505)
T 3prl_A 313 IKELVEQLTVGSPE-DDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKR---QGNLLSPTLLDDVTPAMRVAWEEPF 388 (505)
T ss_dssp HHHHHHHCCBSCTT-TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSGGGTSCCC
T ss_pred HHHHHHhcccCCCC-CcCcCCcccCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCceeCCeEeecCCCCChhhcCCcc
Confidence 99999999999999 9999999999999999999999999999999999974 6899999999999999999999999
Q ss_pred cceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC-CCCCCCcccCCCCCCCccchHH
Q 015042 315 GPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFG-FSMDCPYGGYKMSGFGREYGLE 393 (414)
Q Consensus 315 gPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~-~~~~~p~gG~~~sG~g~~~g~~ 393 (414)
|||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+
T Consensus 389 GPVl~V~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~PFGG~k~SG~Gr~~g~~ 468 (505)
T 3prl_A 389 GPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTDRAINIGKHLEVGTVHINAKTERGPDHFPFLGVKKSGLGVQGIKP 468 (505)
T ss_dssp SSEEEEEEESSHHHHHHHHHTSSEESEEEEECSCHHHHHHHHHTSCSSEEEESSCCCSCSTTSCBCCEETTEESCBSHHH
T ss_pred CcEEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHHCCeeEEEEcCCCCCCCCCCCcCCcCcCCCCcCccHH
Confidence 999999999999999999999999999999999999999999999999999999876 5578999999999999999999
Q ss_pred HHHhhheeeEEEeeCCC
Q 015042 394 SLYKYLQIKSVVTPIYN 410 (414)
Q Consensus 394 ~~~~~~~~k~i~~~~~~ 410 (414)
|+++|++.|+|+++.+.
T Consensus 469 ~~~~f~~~k~v~~~~~~ 485 (505)
T 3prl_A 469 SLLSMTRERVTVLNLAE 485 (505)
T ss_dssp HHHHTEEEEEEEEEC--
T ss_pred HHHHhhceEEEEEeCCC
Confidence 99999999999887653
No 24
>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}
Probab=100.00 E-value=1.2e-90 Score=705.45 Aligned_cols=401 Identities=35% Similarity=0.597 Sum_probs=376.9
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccCCCccccee-ecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTL-REPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~-~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.++++++........... ..+...+++ ++|+|||++|+
T Consensus 91 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~ 169 (497)
T 3i44_A 91 VEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEAL-IEGNEQAILHYDAIGVVGLIT 169 (497)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEES-STTCSSCEEEEEECCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhcccccccc-cCCceeEEEeecCceEEEEEC
Confidence 5789999999999999999999999999876479999999999999877654322111 124557788 99999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCC
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|++++++.++++.|+.||+||+|+||||
T Consensus 170 PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS 249 (497)
T 3i44_A 170 PWNWPMNQVTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGS 249 (497)
T ss_dssp CSSSHHHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESC
T ss_pred CCcchHHHHHHHHHHHHHcCCEEEEECCcccHHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCc
Confidence 99999999999999999999999999999999999999999999999999999999988889999999999999999999
Q ss_pred cHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHH
Q 015042 160 TDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239 (414)
Q Consensus 160 ~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~ 239 (414)
+.+|+.|++.++ +++||+++|+|||||+||++||| +.|++.+++++|.|+||.|++++|||||+++||+|+++|++++
T Consensus 250 ~~~G~~i~~~aa-~~~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~ 327 (497)
T 3i44_A 250 TRAGKDISKNAS-NTLKRVCLELGGKGANIIFADAD-IDALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIA 327 (497)
T ss_dssp HHHHHHHHHHHH-TTTCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-hcCCceeeccCCCCceEECCChh-HHHHHHHHHHHHhcCCCCcccCCEEEEcHHHHHHHHHHHHHHH
Confidence 999999999998 89999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCc-ccC--CCCceeeeEEEeeCCCcccccccceecc
Q 015042 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGK-PIG--DKGYYIEPTIFTNVKEDMIIAKEEIFGP 316 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~-~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 316 (414)
+++++|+|.|+++++||+++..+++++++++++++++|+++++||. ... ..|+|++|||+.+++++|++++||+|||
T Consensus 328 ~~~~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGP 407 (497)
T 3i44_A 328 EKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGP 407 (497)
T ss_dssp HHCCBCCTTSCSSCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSS
T ss_pred HhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCcCCCCcEECCEEEEeCCCCCHHHcCcccCc
Confidence 9999999999999999999999999999999999999999999994 322 2699999999999999999999999999
Q ss_pred eEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHHH
Q 015042 317 VMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLY 396 (414)
Q Consensus 317 vl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~~ 396 (414)
|++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||. ....+.+||||+|.||+|+++|++|++
T Consensus 408 Vl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~-~~~~~~~PfGG~k~SG~Gr~~G~~gl~ 486 (497)
T 3i44_A 408 VLSLLPFNTEDEAVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEVNG-HELPGGSYFGGVKFSGRAREGGLWGIK 486 (497)
T ss_dssp EEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEETT-CCCCTTCCBCCSGGGCCCCBSHHHHHH
T ss_pred eEEEEecCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcCeEEECC-CCCCCCCCcCCcCcCcCCccchHHHHH
Confidence 9999999999999999999999999999999999999999999999999994 556678999999999999999999999
Q ss_pred hhheeeEEE
Q 015042 397 KYLQIKSVV 405 (414)
Q Consensus 397 ~~~~~k~i~ 405 (414)
+||+.|+|+
T Consensus 487 ~~t~~K~v~ 495 (497)
T 3i44_A 487 EFLDTKAIS 495 (497)
T ss_dssp TTEEEEEES
T ss_pred HhcceeEEE
Confidence 999999975
No 25
>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A
Probab=100.00 E-value=2.5e-90 Score=700.09 Aligned_cols=405 Identities=30% Similarity=0.479 Sum_probs=385.1
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccCCCcccceeecCCceEEEEcC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTLREPVGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++. .|+..+++.+++++.+.++..+.......+...+++++|+|||++|+|
T Consensus 57 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P 135 (462)
T 3etf_A 57 LRDIGQALRAHAEEMAQCITREMGKPIKQAR-AEVTKSAALCDWYAEHGPAMLNPEPTLVENQQAVIEYRPLGVILAIMP 135 (462)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHTSCEECSSGGGCEEEEEEECSEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHhHHHhcCCcccCCCCceeEEEeecCcEEEEECC
Confidence 5789999999999999999999999999864 699999999999999887765554222245567889999999999999
Q ss_pred CccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCCc
Q 015042 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++ +.+.++.|+.||++|.|+||||+
T Consensus 136 wN~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~l~~aglP~gv~~vv~g-~~~~~~~l~~~~~v~~v~fTGS~ 214 (462)
T 3etf_A 136 WNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQMIARILAEAGTPAGVYGWVNA-NNEGVSQMINDPRIAAVTVTGSV 214 (462)
T ss_dssp SSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHTTCCBTTEEECCC-CHHHHHHHHTSTTEEEEEEESCH
T ss_pred CchHHHHHHHHHHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcCeEEEEEC-CHHHHHHHhcCCCCCEEEEeCCc
Confidence 99999999999999999999999999999999999999999999999999999998 56788999999999999999999
Q ss_pred HHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHHh
Q 015042 161 DVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240 (414)
Q Consensus 161 ~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~~ 240 (414)
.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|+++++
T Consensus 215 ~~g~~i~~~aa-~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~ 293 (462)
T 3etf_A 215 RAGAAIGAQAG-AALKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAA 293 (462)
T ss_dssp HHHHHHHHHHH-HTTCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHh-ccCCceEEEcCCCCccEECCCCCHHHHHHHHHHHHHhcCCCcccCCcEEEEehhHHHHHHHHHHHHHH
Confidence 99999999988 88999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecceEEE
Q 015042 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGPVMAL 320 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v 320 (414)
++++|+|.++++++||+++..+++++.+++++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|
T Consensus 294 ~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v 373 (462)
T 3etf_A 294 ALKMGDPLVEENDLGPMARFDLRDELHQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAI 373 (462)
T ss_dssp HCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEE
T ss_pred hhcCCCCccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCcEEeeEEEECCCCCChhhcCceeCcEEEE
Confidence 99999999999999999999999999999999999999999999866568999999999999999999999999999999
Q ss_pred EeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHHHhhhe
Q 015042 321 MKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQ 400 (414)
Q Consensus 321 ~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~~~~~~ 400 (414)
++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++||+
T Consensus 374 ~~~~~~deAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~k~SG~G~~~g~~g~~~~~~ 453 (462)
T 3etf_A 374 TVAKDAAHALALANDSEFGLSATIFTADDTLAAEMAARLECGGVFINGYSASDARVAFGGVKKSGFGRELSHFGLHEFCN 453 (462)
T ss_dssp EEESSHHHHHHHHHCSSCCSCEEEECSCHHHHHHHHHHCCSSEEEESSCCCCCTTSCBCCSGGGEECCBSHHHHHHTTEE
T ss_pred EEcCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcCCCCCCccchHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999988778899999999999999999999999999
Q ss_pred eeEEEeeC
Q 015042 401 IKSVVTPI 408 (414)
Q Consensus 401 ~k~i~~~~ 408 (414)
.|+|+++.
T Consensus 454 ~k~v~~~r 461 (462)
T 3etf_A 454 VQTVWKNR 461 (462)
T ss_dssp EEEEEECC
T ss_pred eeEEEEec
Confidence 99998763
No 26
>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.2e-90 Score=708.61 Aligned_cols=406 Identities=31% Similarity=0.482 Sum_probs=382.2
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCccccc-CCCcccceeecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKM-SSELQGYTLREPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++.+.+...+...+. ..+...+.+++|+|||++|+
T Consensus 92 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~ 170 (521)
T 4e4g_A 92 FMKFVQLLNDNMNELAEMLSREHGKTIDDA-KGDIVRGLEVCEFVIGIPHLQKSEFTEGAGPGIDMYSIRQPVGIGAGIT 170 (521)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCSCHHHH-HHHHHHHHHHHHHHHTHHHHTCEEEEEEEETTEEEEEEEEECCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCcEEEEEC
Confidence 578999999999999999999999999986 4699999999999998777665543322 23556789999999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCC
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|++++ +.+.++.|+.||+||+|+||||
T Consensus 171 PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~t~~~l~~l~~eaGlP~gvv~vv~g-~~~~~~~L~~~p~vd~I~FTGS 249 (521)
T 4e4g_A 171 PFNFPGMIPMWMFAPAIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNG-DKGAVDAILTHPDIAAVSFVGS 249 (521)
T ss_dssp CSSCTTHHHHHHHHHHHHTTCEEEEECCTTSTHHHHHHHHHHHHTTCCTTSEEECCC-CHHHHHHHHTCTTCCEEEEESC
T ss_pred CCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCcCeEEEEeC-ChHHHHHHHhCCCcCEEEEECC
Confidence 999999999999999999999999999999999999999999999999999999999 4567799999999999999999
Q ss_pred cHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCc-hHHHHHHHHHHH
Q 015042 160 TDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEG-IYDKFEKKLLEK 238 (414)
Q Consensus 160 ~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~-i~d~f~~~l~~~ 238 (414)
+.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+|||++ +||+|+++|+++
T Consensus 250 ~~vG~~i~~~aa-~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~ 328 (521)
T 4e4g_A 250 TPIARYVYGTAA-MNGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLIDKLVPM 328 (521)
T ss_dssp HHHHHHHHHHHH-HTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-hcCCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccCeEEEEeCchHHHHHHHHHHHH
Confidence 999999999988 889999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred HhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccc----CCCCceeeeEEEeeCCCccccccccee
Q 015042 239 AKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPI----GDKGYYIEPTIFTNVKEDMIIAKEEIF 314 (414)
Q Consensus 239 ~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~~E~f 314 (414)
++++++|+|.++++++||+++..+++++.+++++++++|+++++||... ..+|+|++|||+.+++++|++++||+|
T Consensus 329 ~~~~~vG~~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiF 408 (521)
T 4e4g_A 329 VESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIF 408 (521)
T ss_dssp HHTCCBCCTTCTTCSBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSCCC
T ss_pred HHhccCCCCCCccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCccc
Confidence 9999999999999999999999999999999999999999999999753 247999999999999999999999999
Q ss_pred cceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCC-CCCCCcccCCCCCCC--ccch
Q 015042 315 GPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGF-SMDCPYGGYKMSGFG--REYG 391 (414)
Q Consensus 315 gPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~p~gG~~~sG~g--~~~g 391 (414)
|||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++... .+.+||||+|.||+| +++|
T Consensus 409 GPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~k~SG~G~~~~~G 488 (521)
T 4e4g_A 409 GPVLSVVRARNYEEALSLPMKHEYGNGVAIYTRDGDAARDFASRINIGMVGVNVPIPVPLAYHSFGGWKSSSFGDLNQHG 488 (521)
T ss_dssp SSEEEECCBSSHHHHHHHHHHSSEESEEEEECSBHHHHHHHHHHCCCSEEEESCSSCCCCTTSCBCCEETTEESSCCBSH
T ss_pred CcEEEEEEeCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCcCCcccCCCCCCccch
Confidence 9999999999999999999999999999999999999999999999999999998654 478999999999999 7999
Q ss_pred HHHHHhhheeeEEEeeCC
Q 015042 392 LESLYKYLQIKSVVTPIY 409 (414)
Q Consensus 392 ~~~~~~~~~~k~i~~~~~ 409 (414)
++|+++||++|+|+.+++
T Consensus 489 ~~gl~~ft~~K~v~~~~~ 506 (521)
T 4e4g_A 489 TDSIKFWTRTKTITSRWP 506 (521)
T ss_dssp HHHHHHTEEEEEEEECCC
T ss_pred HHHHHHhheEEEEEEecC
Confidence 999999999999998764
No 27
>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*
Probab=100.00 E-value=2.1e-90 Score=701.90 Aligned_cols=399 Identities=34% Similarity=0.567 Sum_probs=378.7
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccCCCcccceeecCCceEEEEcC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTLREPVGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++. .|+..+++.+++++.++++..+...+.. +...+.+++|+|||++|+|
T Consensus 62 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~P~GVv~~I~P 139 (486)
T 3pqa_A 62 LMNIAKQIKEKKEELAKILAIDAGKPIKQAR-VEVERSIGTFKLAAFYVKEHRDEVIPSD-DRLIFTRREPVGIVGAITP 139 (486)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHCCEEEECCT-TEEEEEEEEECSEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCceecCC-CceeEEEEccccEEEEECC
Confidence 5789999999999999999999999999864 6999999999999999887765554432 5678899999999999999
Q ss_pred CccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHc----CCCCCcEEEEeCCchhhHHHhhhCCCccEEEE
Q 015042 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLA----GIPDGVLNVVPGFGPTAGAAICSHMDIDYVCF 156 (414)
Q Consensus 81 ~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~a----G~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~ 156 (414)
||||+...++++++||++||+||+|||+.+|.++..+++++.++ |+|+|+++++++++.++++.|+.||+||+|+|
T Consensus 140 wN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~f 219 (486)
T 3pqa_A 140 FNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISF 219 (486)
T ss_dssp SSSHHHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEE
T ss_pred CchHHHHHHHHHHHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEE
Confidence 99999999999999999999999999999999999999999999 99999999999987788999999999999999
Q ss_pred eCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHH
Q 015042 157 TGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLL 236 (414)
Q Consensus 157 tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~ 236 (414)
|||+.+|+.|++.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+
T Consensus 220 TGS~~~g~~i~~~aa---~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~ 296 (486)
T 3pqa_A 220 TGSSKVGELITKKAG---FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFV 296 (486)
T ss_dssp ESCHHHHHHHHHHCC---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHH
T ss_pred ECChHHHHHHHHHcC---CCceeeccCCcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHHHHHHHHHHH
Confidence 999999999998864 89999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecc
Q 015042 237 EKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGP 316 (414)
Q Consensus 237 ~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 316 (414)
++++++++|+|+++++++||+++..+++++.+++++++++|+++++||.. .|+|++|||+ +++++|++++||+|||
T Consensus 297 ~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl-~v~~~~~i~~eEiFGP 372 (486)
T 3pqa_A 297 NKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKR---DKALFYPTIL-EVDRDNILCKTETFAP 372 (486)
T ss_dssp HHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEE-ECCTTSGGGTCCCCSS
T ss_pred HHHHhcccCCCCcCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCcEeccEEE-eCCCCChhhccccccc
Confidence 99999999999999999999999999999999999999999999999975 6899999999 9999999999999999
Q ss_pred eEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCC-CCCCCcccCCCCCCCccchHHHH
Q 015042 317 VMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGF-SMDCPYGGYKMSGFGREYGLESL 395 (414)
Q Consensus 317 vl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~p~gG~~~sG~g~~~g~~~~ 395 (414)
|++|++|+| ||||+++|+++|||++||||+|.+.++++++++++|+|+||++... .+.+||||+|.||+|+++|++|+
T Consensus 373 Vl~v~~~~~-deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~Gr~~g~~gl 451 (486)
T 3pqa_A 373 VIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDINKSLKFAENLEFGGVVINDSSLFRQDNMPFGGVKKSGLGREGVKYAM 451 (486)
T ss_dssp EEEEEEECH-HHHHHHHTCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSCTTCCCTTSCBCCSGGGEESCBSHHHHH
T ss_pred EEEEEEEcH-HHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEEeCCCCcCCCCCCCCCcCcCcCCCCCcHHHH
Confidence 999999999 9999999999999999999999999999999999999999998653 35899999999999999999999
Q ss_pred HhhheeeEEEeeCC
Q 015042 396 YKYLQIKSVVTPIY 409 (414)
Q Consensus 396 ~~~~~~k~i~~~~~ 409 (414)
++||+.|+|+++..
T Consensus 452 ~~f~~~k~v~~~~~ 465 (486)
T 3pqa_A 452 EEMSNIKTIIISKA 465 (486)
T ss_dssp HHTEEEEEEEEEC-
T ss_pred HHhhceEEEEEcCC
Confidence 99999999988764
No 28
>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*
Probab=100.00 E-value=1.2e-90 Score=704.89 Aligned_cols=404 Identities=38% Similarity=0.661 Sum_probs=383.7
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCccccc-CCCcccceeecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKM-SSELQGYTLREPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++. .|+..+++.+++++.+.++..+...+. ..+...+.+++|+|||++|+
T Consensus 76 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~ 154 (487)
T 2w8n_A 76 LRKWYNLMIQNKDDLARIITAESGKPLKEAH-GEILYSAFFLEWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVIT 154 (487)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCCCEEECCSCTTCEEEEEEEECCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceEEEEEC
Confidence 5789999999999999999999999999865 599999999999999888766655443 23456788999999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEe---CCchhhHHHhhhCCCccEEEE
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVP---GFGPTAGAAICSHMDIDYVCF 156 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~---~~~~~~~~~l~~~~~v~~v~~ 156 (414)
|||||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++ +.+.+.++.|+.||+||+|.|
T Consensus 155 PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~f 234 (487)
T 2w8n_A 155 PWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISF 234 (487)
T ss_dssp CSSSTTHHHHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEE
T ss_pred CCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999 766778999999999999999
Q ss_pred eCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHH
Q 015042 157 TGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLL 236 (414)
Q Consensus 157 tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~ 236 (414)
|||+.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|+
T Consensus 235 TGS~~~g~~i~~~aa-~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~ 313 (487)
T 2w8n_A 235 TGSTTTGKILLHHAA-NSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFA 313 (487)
T ss_dssp EECHHHHHHHHHHHH-TTTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHHHHHHHHHHH
T ss_pred eCCHHHHHHHHHHHh-ccCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCCEEEEcccHHHHHHHHHH
Confidence 999999999999998 8999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhh-cccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCc-eeeeEEEeeCCCccccccccee
Q 015042 237 EKAKA-WLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGY-YIEPTIFTNVKEDMIIAKEEIF 314 (414)
Q Consensus 237 ~~~~~-~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~-~~~Ptvl~~~~~~~~~~~~E~f 314 (414)
+.+++ +++|+|.++++++||+++..+++++.+++++++++|+++++||... ..|+ |++|||+.+++++|++++||+|
T Consensus 314 ~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~~-~~g~~~~~Ptvl~~v~~~~~i~~eEiF 392 (487)
T 2w8n_A 314 EAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRH-QLGKNFFEPTLLCNVTQDMLCTHEETF 392 (487)
T ss_dssp HHHHHHCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSBC-TTCTTCBCCEEEEEECGGGGTTCTTCC
T ss_pred HHHHhhcccCCcccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC-CCCCceECCEEEecCCCcchhhhcccc
Confidence 99999 9999999999999999999999999999999999999999999764 2688 9999999999999999999999
Q ss_pred cceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHH
Q 015042 315 GPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLES 394 (414)
Q Consensus 315 gPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~ 394 (414)
|||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|.+|
T Consensus 393 GPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~~~SG~G~~~G~~~ 472 (487)
T 2w8n_A 393 GPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYG 472 (487)
T ss_dssp SSEEEEEEESCHHHHHHHHTCTTCCSEEEEECCCHHHHHHHHHHSCSSEEEESCSCCCCTTSCBCCSGGGEESCBSTTTG
T ss_pred cceEEEEEeCCHHHHHHHHhCCCCCceEEEeCCCHHHHHHHHHhCCeeeEEEcCCCCCCCCCCCCCCCCCCcCCCchHHH
Confidence 99999999999999999999999999999999999999999999999999999988777789999999999999999999
Q ss_pred HHhhheeeEEEee
Q 015042 395 LYKYLQIKSVVTP 407 (414)
Q Consensus 395 ~~~~~~~k~i~~~ 407 (414)
+++|++.|+|+.+
T Consensus 473 l~~f~~~k~v~~~ 485 (487)
T 2w8n_A 473 IDEYLELKYVCYG 485 (487)
T ss_dssp GGGGEEEEEEEEC
T ss_pred HHHhcCccEEEEe
Confidence 9999999999875
No 29
>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}
Probab=100.00 E-value=6.1e-90 Score=703.14 Aligned_cols=408 Identities=34% Similarity=0.543 Sum_probs=367.7
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccC--CCcccceeecCCceEEEE
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS--SELQGYTLREPVGVVGHI 78 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~--~~~~~~~~~~P~Gvv~~i 78 (414)
|+++++.|++|+++|++++++|+|||..++. .|+..+++.+++++.+.++..+ ..+.. .+...+++++|+|||++|
T Consensus 78 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~Ev~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~P~GVv~~I 155 (508)
T 3r64_A 78 IYRAAELLEEHREEIVEWLIKESGSTRSKAN-LEITLAGNITKESASFPGRVHG-RISPSNTPGKENRVYRVAKGVVGVI 155 (508)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHTSCCCHHHHH-HHHHHHHHHHHHHTTSTTTCCE-EEECCSSTTEEEEEEEEECSEEEEE
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHhhhhcC-cccccCCCCceeEEEEecceEEEEE
Confidence 5789999999999999999999999999865 5999999999999988876655 44432 346788999999999999
Q ss_pred cCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHH-HHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEe
Q 015042 79 IPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTA-LYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFT 157 (414)
Q Consensus 79 ~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~-~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~t 157 (414)
+|||||+...++++++||++||+||+|||+.+|.++ ..+.+++.++|+|+|+++++++++.+.++.|+.||+||+|.||
T Consensus 156 ~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fT 235 (508)
T 3r64_A 156 SPWNFPLNLSIRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFT 235 (508)
T ss_dssp CCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCHHHHTHHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEE
T ss_pred CCCcchHHHHHHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEE
Confidence 999999999999999999999999999999999999 9999999999999999999999778899999999999999999
Q ss_pred CCcHHHHHHHHHHHhc--ccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHH
Q 015042 158 GSTDVGRLVMQAAAAS--NLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKL 235 (414)
Q Consensus 158 Gs~~~g~~i~~~~a~~--~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l 235 (414)
||+.+|+.|++.++ + +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|
T Consensus 236 GS~~~g~~i~~~aa-~~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l 314 (508)
T 3r64_A 236 GSTPVGRRVGELAI-NGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKF 314 (508)
T ss_dssp SCHHHHHHHHHHHH-SSSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEEHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhh-cccCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEehhHHHHHHHHH
Confidence 99999999999987 6 89999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceec
Q 015042 236 LEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFG 315 (414)
Q Consensus 236 ~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fg 315 (414)
+++++++++|+|.++++++||+++..+++++++++++++++|+++++||.. .|+|+.|||+.+++++|++++||+||
T Consensus 315 ~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl~~v~~~~~i~~eEiFG 391 (508)
T 3r64_A 315 VEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI---EGRLVHPHVFSDVTSDMEIAREEIFG 391 (508)
T ss_dssp HHHHHTCCBSCTTSSSCCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCE---ETTEECCEEEEEECTTSGGGTSCCCS
T ss_pred HHHHHhccCCCCccCCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCC---CCcEEecEEEecCCCCChhhcccccC
Confidence 999999999999999999999999999999999999999999999999976 68999999999999999999999999
Q ss_pred ceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCC-CCCCCcccCCCCCCCccchHHH
Q 015042 316 PVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGF-SMDCPYGGYKMSGFGREYGLES 394 (414)
Q Consensus 316 Pvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~p~gG~~~sG~g~~~g~~~ 394 (414)
||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++... .+.+||||+|.||+|+++|++|
T Consensus 392 PVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~~~SG~Gr~~G~~~ 471 (508)
T 3r64_A 392 PLISVLKADDEAHAAELANASDFGLSAAVWSKDIDRAAQFALQIDSGMVHINDLTVNDEPHVMFGGSKNSGLGRFNGDWA 471 (508)
T ss_dssp SEEEEEEESSHHHHHHHHTSSSCCSCEEEECSCHHHHHHHHTTSCSSEEEECC--------------------CCCHHHH
T ss_pred ceEEEEEeCCHHHHHHHHhCCCCCcEEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCcCCcCCCCCCcCccHHH
Confidence 999999999999999999999999999999999999999999999999999998754 6789999999999999999999
Q ss_pred HHhhheeeEEEeeCC-----CCCCC
Q 015042 395 LYKYLQIKSVVTPIY-----NSPWL 414 (414)
Q Consensus 395 ~~~~~~~k~i~~~~~-----~~~~~ 414 (414)
+++||++|+|+++.. ...||
T Consensus 472 l~~ft~~k~v~~~~~~~~~~~~~~~ 496 (508)
T 3r64_A 472 IEEFTTDRWIGIKRSAENLYFQSHH 496 (508)
T ss_dssp HHHTEEEEEEEEECCSTTCCCC---
T ss_pred HHHhhceEEEEEecccchhcchhhc
Confidence 999999999988764 35565
No 30
>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*
Probab=100.00 E-value=3.9e-90 Score=702.93 Aligned_cols=405 Identities=32% Similarity=0.478 Sum_probs=382.1
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccC--C---CcccceeecCCceE
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS--S---ELQGYTLREPVGVV 75 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~--~---~~~~~~~~~P~Gvv 75 (414)
|+++++.|++|+++|++++++|+|||..++. .|+..+++.+++++.++++..+..++.. . +...+.+++|+|||
T Consensus 83 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv 161 (501)
T 1uxt_A 83 LRKAADIIERNLDVFAEVLVMNAGKPKSAAV-GEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVV 161 (501)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHTGGGGGGGTCCEEEESTTSSTTTTEEEEEEEEECSEE
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccccCCCcCceEEEEEeeccEE
Confidence 5789999999999999999999999999865 7999999999999998887766554432 2 23568999999999
Q ss_pred EEEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEE
Q 015042 76 GHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVC 155 (414)
Q Consensus 76 ~~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~ 155 (414)
++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|++++.+ ++++.|+.||+||+|+
T Consensus 162 ~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~-~~g~~L~~~~~vd~I~ 240 (501)
T 1uxt_A 162 AAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPG-KEAEKIVADDRVAAVS 240 (501)
T ss_dssp EEECCTTSTTHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCH-HHHHHHHTCTTCCEEE
T ss_pred EEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHHhCCCcCeEEEEeCCc-HHHHHHHhCCCcCEEE
Confidence 999999999999999999999999999999999999999999999999999999999999976 8899999999999999
Q ss_pred EeCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHH
Q 015042 156 FTGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKL 235 (414)
Q Consensus 156 ~tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l 235 (414)
||||+.+|+.|++.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|
T Consensus 241 FTGS~~~G~~i~~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l 317 (501)
T 1uxt_A 241 FTGSTEVGERVVKVGG---VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEV 317 (501)
T ss_dssp EESCHHHHHHHHHHHC---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHH
T ss_pred EeCcHHHHHHHHHhcC---CCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEEEeccchHHHHHHHH
Confidence 9999999999998864 8999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCC-ceeeeEEEeeCC---Cccccccc
Q 015042 236 LEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKG-YYIEPTIFTNVK---EDMIIAKE 311 (414)
Q Consensus 236 ~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g-~~~~Ptvl~~~~---~~~~~~~~ 311 (414)
++.++++++|+|.++++++||+++..+++++.+++++++++|+++++||.. .| +|++|||+.+++ ++|.+++|
T Consensus 318 ~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~---~g~~~~~Ptvl~~v~~~~~~~~i~~e 394 (501)
T 1uxt_A 318 AKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR---LGPTYVQPTFVEAPADRVKDMVLYKR 394 (501)
T ss_dssp HHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCB---CSSSCBCCEEEECCHHHHTTSHHHHS
T ss_pred HHHHHhccCCCccccCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCCceECCEEEeCCCCCCCcCHHHhC
Confidence 999999999999999999999999999999999999999999999999976 57 999999999999 99999999
Q ss_pred ceecceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCc-CCCCCCCCcccCCCCCCCccc
Q 015042 312 EIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCY-FGFSMDCPYGGYKMSGFGREY 390 (414)
Q Consensus 312 E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~-~~~~~~~p~gG~~~sG~g~~~ 390 (414)
|+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++ ....+.+||||+|.||+|+++
T Consensus 395 EiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~PfGG~k~SG~G~~~ 474 (501)
T 1uxt_A 395 EVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREG 474 (501)
T ss_dssp CCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCCCCTTSSSCBCCEETTEESCBS
T ss_pred cccCceEEEEeeCCHHHHHHHHhcCCCCcEEEEeCCCHHHHHHHHHhCCEeeEEEeCCCCCCCCCCCCCCcCCCCCCccC
Confidence 9999999999999999999999999999999999999999999999999999999998 566788999999999999999
Q ss_pred hHHHHHhhheeeEEEeeCC-CCCC
Q 015042 391 GLESLYKYLQIKSVVTPIY-NSPW 413 (414)
Q Consensus 391 g~~~~~~~~~~k~i~~~~~-~~~~ 413 (414)
|.+|+++||++|+|+.+.. ..+|
T Consensus 475 G~~~l~~f~~~k~v~~~~~~~~~~ 498 (501)
T 1uxt_A 475 IGYAVEAVTAYKTIVFNYKGKGVW 498 (501)
T ss_dssp TTTTHHHHEEEEEEEEECTTSSSS
T ss_pred hHHHHHHhCceeEEEEecCCCccc
Confidence 9999999999999988764 3444
No 31
>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=8.9e-90 Score=699.62 Aligned_cols=406 Identities=29% Similarity=0.479 Sum_probs=361.9
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccC--CCcccceeecCCceEEEE
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS--SELQGYTLREPVGVVGHI 78 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~--~~~~~~~~~~P~Gvv~~i 78 (414)
|+++++.|++|+++|++++++|+|||..++.. |+..+++.+++++.+.++..+...+.. .+...+.+++|+|||++|
T Consensus 72 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I 150 (485)
T 4dng_A 72 LQKARGYLHENRDDIIMMIARETGGTIIKSTI-ELEQTIAILDEAMTYTGELGGVKEVPSDIEGKTNKIYRLPLGVISSI 150 (485)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCSCEECCCCSSTTEEEEEEEEECCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhCCeeccccCCCCceEEEEEecceEEEEE
Confidence 57899999999999999999999999998754 999999999999999887666544432 346688999999999999
Q ss_pred cCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHH-HHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEe
Q 015042 79 IPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTA-LYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFT 157 (414)
Q Consensus 79 ~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~-~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~t 157 (414)
+|||||+...++++++||++||+||+|||+.+|.++ ..+.+++.++|+|+|++|++++++.+.++.|+.||++|+|.||
T Consensus 151 ~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fT 230 (485)
T 4dng_A 151 SPFNFPMNLSMRSIAPAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFT 230 (485)
T ss_dssp CCSSSHHHHHHHHHHHHHHTTCEEEEECCGGGHHHHTHHHHHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEE
T ss_pred CCCccHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEE
Confidence 999999999999999999999999999999999999 9999999999999999999999777799999999999999999
Q ss_pred CCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHH
Q 015042 158 GSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLE 237 (414)
Q Consensus 158 Gs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~ 237 (414)
||+.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|++
T Consensus 231 GS~~~g~~i~~~aa-~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~ 309 (485)
T 4dng_A 231 GSTAVGRHIGEIAG-RAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTA 309 (485)
T ss_dssp ECHHHHHHHHHHHH-HHTCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHTTCC----CCEEEEEEEHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHh-hhccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCccccCCEEEEeHHHHHHHHHHHHH
Confidence 99999999999988 88999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecce
Q 015042 238 KAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGPV 317 (414)
Q Consensus 238 ~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv 317 (414)
+++++++|+|.|+++++||+++..+++++.+++++++++|+++++||.. .|+|++|||+.+++++|++++||+||||
T Consensus 310 ~~~~~~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~---~g~~~~Ptvl~~v~~~~~i~~eE~FGPv 386 (485)
T 4dng_A 310 RVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKR---VGNVLTPYVFVGADNNSKIAQTELFAPI 386 (485)
T ss_dssp HHHHCCBSCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSHHHHCCCCSSE
T ss_pred HHHhccCCCCCcCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCC---CCcEECCEEEecCCCCChhhcCccccce
Confidence 9999999999999999999999999999999999999999999999976 6899999999999999999999999999
Q ss_pred EEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCC-CCCCCcccCCCCCCCccchHHHHH
Q 015042 318 MALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGF-SMDCPYGGYKMSGFGREYGLESLY 396 (414)
Q Consensus 318 l~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~p~gG~~~sG~g~~~g~~~~~ 396 (414)
++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++... .+.+||||+|.||+|+++|+++++
T Consensus 387 l~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~ 466 (485)
T 4dng_A 387 ATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLEKGEKFALQIDSGMTHVNDQSVNDSPNIAFGGNKASGVGRFGNPWVVE 466 (485)
T ss_dssp EEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHTTSCSSEEEESCC----------------------CHHHHH
T ss_pred EEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCcCCcCCCCCCccchHHHHH
Confidence 9999999999999999999999999999999999999999999999999998754 688999999999999999999999
Q ss_pred hhheeeEEEeeCCCC
Q 015042 397 KYLQIKSVVTPIYNS 411 (414)
Q Consensus 397 ~~~~~k~i~~~~~~~ 411 (414)
+||+.|+|+++....
T Consensus 467 ~~t~~k~v~~~~~~~ 481 (485)
T 4dng_A 467 EFTVTKWISIQKQYR 481 (485)
T ss_dssp HHEEEEEEEEEC---
T ss_pred HhhceEEEEEecCCc
Confidence 999999999887543
No 32
>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*
Probab=100.00 E-value=1.8e-89 Score=698.45 Aligned_cols=405 Identities=28% Similarity=0.480 Sum_probs=379.0
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccC-CCcccceeecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS-SELQGYTLREPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++.+.+++.+...+.. .+...+.+++|+|||++|+
T Consensus 87 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~ 165 (500)
T 2j6l_A 87 VRQIGDALREKIQVLGSLVSLEMGKILVEG-VGEVQEYVDICDYAVGLSRMIGGPILPSERSGHALIEQWNPVGLVGIIT 165 (500)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHTCCCHHHH-HHHHHHHHHHHHHHHHHTTTCCCBEECCSSTTEEEEEEEEECSEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCccccccCCCceeEEEEecccEEEEEC
Confidence 578999999999999999999999999986 57999999999999988877655544332 2334578899999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHH----HcCCCCCcEEEEeCCchhhHHHhhhCCCccEEE
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAK----LAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVC 155 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~----~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~ 155 (414)
|||||+...++++++||++||+||+|||+.+|+++..+++++. ++|+|+|+++++++ +.++++.|+.||+||+|+
T Consensus 166 PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g-~~~~g~~L~~~~~vd~I~ 244 (500)
T 2j6l_A 166 AFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCG-GADIGTAMAKDERVNLLS 244 (500)
T ss_dssp CSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECC-SHHHHHHHHHCTTCSEEE
T ss_pred CCcchhhHHHHHHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeC-CHHHHHHHhcCCCcCEEE
Confidence 9999999999999999999999999999999999999888765 56999999999999 778899999999999999
Q ss_pred EeCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHH
Q 015042 156 FTGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKL 235 (414)
Q Consensus 156 ~tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l 235 (414)
||||+.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|
T Consensus 245 FTGS~~~g~~i~~~aa-~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l 323 (500)
T 2j6l_A 245 FTGSTQVGKQVGLMVQ-ERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRL 323 (500)
T ss_dssp EESCHHHHHHHHHHHH-HTTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETTTHHHHHHHH
T ss_pred EECCHHHHHHHHHHhc-cCCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHHHHHHHHHHH
Confidence 9999999999999988 889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceec
Q 015042 236 LEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFG 315 (414)
Q Consensus 236 ~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fg 315 (414)
++.++++++|+|.++++++||+++..+++++++++++++++|+++++||...+..|+|++|||+.+++++|.+++||+||
T Consensus 324 ~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFG 403 (500)
T 2j6l_A 324 KKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFA 403 (500)
T ss_dssp HHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSSCBCCEEEESCCTTCHHHHSCCSS
T ss_pred HHHhhhcccCCcccCCCccccCCCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCCEEcCEEEECCCCcChhhcCcccC
Confidence 99999999999999999999999999999999999999999999999998644469999999999999999999999999
Q ss_pred ceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHH--HhcceeEEEEcCcCC-CCCCCCcccCCCCCCCccchH
Q 015042 316 PVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVS--RSIRAGIIWINCYFG-FSMDCPYGGYKMSGFGREYGL 392 (414)
Q Consensus 316 Pvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~--~~l~~g~v~iN~~~~-~~~~~p~gG~~~sG~g~~~g~ 392 (414)
||++|++|+|+||||+++|+++|||++||||+|.+.+++++ .++++|+|+||++.. ..+.+||||+|.||+|+++|.
T Consensus 404 PVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~V~vN~~~~~~~~~~PfGG~k~SG~G~~~g~ 483 (500)
T 2j6l_A 404 PILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGS 483 (500)
T ss_dssp SEEEEEEECCHHHHHHHHHTSSCCSEEEEECCCHHHHHHHHSTTSCCSSEEEESSCTTCCCTTSEECCSGGGCSCCEEST
T ss_pred ceEEEEeeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHhhccCCeeEEEECCCCccCCCCCCcCCcCCCCCCCcchH
Confidence 99999999999999999999999999999999999999999 779999999998765 346899999999999999999
Q ss_pred HHHHhhheeeEEEeeC
Q 015042 393 ESLYKYLQIKSVVTPI 408 (414)
Q Consensus 393 ~~~~~~~~~k~i~~~~ 408 (414)
+|+++|++.|+|+++.
T Consensus 484 ~~~~~f~~~k~v~~~~ 499 (500)
T 2j6l_A 484 DAWKQYMRRSTCTINY 499 (500)
T ss_dssp TGGGGGEEEEEEEEEC
T ss_pred HHHHHhhceEEEEEeC
Confidence 9999999999998763
No 33
>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*
Probab=100.00 E-value=4.4e-89 Score=698.07 Aligned_cols=404 Identities=32% Similarity=0.566 Sum_probs=378.3
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccc--cCCCcccceeecCCceEEEE
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLK--MSSELQGYTLREPVGVVGHI 78 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~--~~~~~~~~~~~~P~Gvv~~i 78 (414)
|+++++.|++|+++|++++++|+|||..++. .|+..+++.+++++..+++..+...+ ...+...+.+++|+|||++|
T Consensus 102 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I 180 (516)
T 1uzb_A 102 LLKAAALMRRRKRELEATLVYEVGKNWVEAS-ADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVI 180 (516)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccccCCCCceEEEEEeccceEEEE
Confidence 5789999999999999999999999999865 69999999999999988877665422 12344568899999999999
Q ss_pred cCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeC
Q 015042 79 IPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTG 158 (414)
Q Consensus 79 ~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tG 158 (414)
+|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|++++.+.++++.|+.||+||+|.|||
T Consensus 181 ~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTG 260 (516)
T 1uzb_A 181 APWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTG 260 (516)
T ss_dssp CCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEES
T ss_pred CCCccHHHHHHHHHHHHHHcCCeEEEeCCCCCHHHHHHHHHHHHHhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecC
Confidence 99999999999999999999999999999999999999999999999999999999997778899999999999999999
Q ss_pred CcHHHHHHHHHHHh-----cccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHH
Q 015042 159 STDVGRLVMQAAAA-----SNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEK 233 (414)
Q Consensus 159 s~~~g~~i~~~~a~-----~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~ 233 (414)
|+.+|+.|++.++. ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|++
T Consensus 261 S~~~G~~i~~~aa~~~~~~~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~ 340 (516)
T 1uzb_A 261 SLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLE 340 (516)
T ss_dssp CHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHH
T ss_pred CHHHHHHHHHHhhhccccccccceeEEecCCccceeECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEchHHHHHHHH
Confidence 99999999998762 5689999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccce
Q 015042 234 KLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEI 313 (414)
Q Consensus 234 ~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~ 313 (414)
+|++.++++++|+| ++++++||+++..+++++.+++++++++| ++++||...+..|+|++|||+.+++++|++++||+
T Consensus 341 ~l~~~~~~~~~G~p-~~~~~~Gpli~~~~~~~v~~~i~~a~~~G-~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEi 418 (516)
T 1uzb_A 341 RVLKRAERLSVGPA-EENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEI 418 (516)
T ss_dssp HHHHHHTTCCBSCG-GGCCSBCCCSCHHHHHHHHHHHHHHTTTS-EEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCC
T ss_pred HHHHHHHhccCCCC-ccccccCCCCCHHHHHHHHHHHHHHHHCC-CEEECCccCCCCCcEECCEEEECCCCCCHhhhccc
Confidence 99999999999999 99999999999999999999999999998 89999976334699999999999999999999999
Q ss_pred ecceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC--CCCCCCcccCCCCCCC-ccc
Q 015042 314 FGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFG--FSMDCPYGGYKMSGFG-REY 390 (414)
Q Consensus 314 fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~p~gG~~~sG~g-~~~ 390 (414)
||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++.. ..+.+||||+|.||+| +++
T Consensus 419 FGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~ 498 (516)
T 1uzb_A 419 FGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTG 498 (516)
T ss_dssp CSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBT
T ss_pred cCceEEEEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCEeEEEEeCCCCCCCCCCCCCCCcCcCCCCCccc
Confidence 9999999999999999999999999999999999999999999999999999998654 3568999999999999 478
Q ss_pred hHHHHHhhheeeEEEee
Q 015042 391 GLESLYKYLQIKSVVTP 407 (414)
Q Consensus 391 g~~~~~~~~~~k~i~~~ 407 (414)
|.+++++||++|+|+.+
T Consensus 499 g~~~l~~f~~~k~v~~~ 515 (516)
T 1uzb_A 499 ALDYLRLFLEMKAVAER 515 (516)
T ss_dssp SHHHHHTTEEEEEEEEE
T ss_pred hHHHHHHcCCeeEEEec
Confidence 99999999999999875
No 34
>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*
Probab=100.00 E-value=2.3e-89 Score=694.40 Aligned_cols=400 Identities=34% Similarity=0.515 Sum_probs=378.1
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccC-CC----ccc-ceeecCCce
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS-SE----LQG-YTLREPVGV 74 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~-~~----~~~-~~~~~P~Gv 74 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++.+.++..+...+.. .+ ... +.+++|+||
T Consensus 68 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GV 146 (475)
T 1euh_A 68 LHKVADILMRDKEKIGAILSKEVAKGYKSA-VSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGL 146 (475)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHTCCHHHH-HHHHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSE
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCccccceeeEEEEeccce
Confidence 578999999999999999999999999986 56999999999999998877655543322 23 345 889999999
Q ss_pred EEEEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEE
Q 015042 75 VGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYV 154 (414)
Q Consensus 75 v~~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v 154 (414)
|++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|+++++++.+.+.++.|+.||++|+|
T Consensus 147 v~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V 226 (475)
T 1euh_A 147 VLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFI 226 (475)
T ss_dssp EEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEE
T ss_pred EEEECCCCchHHHHHHHHHHHHHcCCEEEEeCCCcChHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999767789999999999999
Q ss_pred EEeCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHH
Q 015042 155 CFTGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKK 234 (414)
Q Consensus 155 ~~tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~ 234 (414)
.||||+.+|+.|++.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++
T Consensus 227 ~fTGS~~~g~~i~~~aa---~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~ 303 (475)
T 1euh_A 227 NFTGSTGIGERIGKMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEK 303 (475)
T ss_dssp EEESCHHHHHHHHHHTT---TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHH
T ss_pred EEECchHHHHHHHHhcC---CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEehhHHHHHHHH
Confidence 99999999999998864 899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCccccccccee
Q 015042 235 LLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIF 314 (414)
Q Consensus 235 l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~f 314 (414)
|+++++++++|+|.+ ++++||+++..+++++.+++++++++|+++++||.. .|+|++|||+.+++++|++++||+|
T Consensus 304 l~~~~~~~~~g~p~~-~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~---~g~~~~Ptvl~~v~~~~~~~~eE~F 379 (475)
T 1euh_A 304 IREKVLALTIGNPED-DADITPLIDTKSADYVEGLINDANDKGATALTEIKR---EGNLICPILFDKVTTDMRLAWEEPF 379 (475)
T ss_dssp HHHHHHTSCBSCGGG-TCSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE---ETTEECCEEEESCCTTSGGGTSCCC
T ss_pred HHHHHHhccCCCccc-cCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCceeCCEEEeCCCCcCHHHcCccc
Confidence 999999999999999 999999999999999999999999999999999976 5899999999999999999999999
Q ss_pred cceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcC-cCCCCCCCCcccCCCCCCCccchHH
Q 015042 315 GPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINC-YFGFSMDCPYGGYKMSGFGREYGLE 393 (414)
Q Consensus 315 gPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~-~~~~~~~~p~gG~~~sG~g~~~g~~ 393 (414)
|||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||+ +....+.+||||+|.||+|+++|++
T Consensus 380 GPvl~v~~~~~~~eai~~an~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~pfGG~k~SG~G~~~g~~ 459 (475)
T 1euh_A 380 GPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKY 459 (475)
T ss_dssp SSEEEEEEESCHHHHHHHHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCCCSTTSCBCCEETTEESCBSHHH
T ss_pred cceEEEEecCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHhCCEeeEEECCCCCCCCCCCCcCCCCCCCcCCCccHH
Confidence 999999999999999999999999999999999999999999999999999999 6666788999999999999999999
Q ss_pred HHHhhheeeEEEeeC
Q 015042 394 SLYKYLQIKSVVTPI 408 (414)
Q Consensus 394 ~~~~~~~~k~i~~~~ 408 (414)
|+++|+++|+|+.+.
T Consensus 460 ~~~~~~~~k~v~~~~ 474 (475)
T 1euh_A 460 SIEAMTTVKSVVFDI 474 (475)
T ss_dssp HHHHTEEEEEEEEEC
T ss_pred HHHHhCCeeEEEEec
Confidence 999999999998764
No 35
>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=3e-89 Score=694.52 Aligned_cols=400 Identities=37% Similarity=0.625 Sum_probs=357.5
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccCCCcccceeecCCceEEEEcC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTLREPVGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.++++++..++..+.. .....+.+++|+|||++|+|
T Consensus 73 L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~----~~~~~~~~~~P~GVv~~I~P 148 (478)
T 3ty7_A 73 LDKIVKEYENRKDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEE----RRGDDLVVKEAIGVSGLITP 148 (478)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEE----EETTEEEEEEECCCEEEECC
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhccc----CCccceEEecCceEEEEECC
Confidence 57899999999999999999999999998757799999999999999887765432 22467889999999999999
Q ss_pred CccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCCc
Q 015042 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++++.++++.|+.||+||+|+||||+
T Consensus 149 wN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~ 228 (478)
T 3ty7_A 149 WNFPTNQTSLKLAAAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSG 228 (478)
T ss_dssp SSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCH
T ss_pred CcchHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcH
Confidence 99999999999999999999999999999999999999999999999999999999888899999999999999999999
Q ss_pred HHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHHh
Q 015042 161 DVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240 (414)
Q Consensus 161 ~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~~ 240 (414)
.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|+++++
T Consensus 229 ~~G~~i~~~aa-~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~ 307 (478)
T 3ty7_A 229 PTGSKIMEKAA-KDFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFS 307 (478)
T ss_dssp HHHCC--CSTT-TTTCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEETTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-hcCCceEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCCCeEEEcHHHHHHHHHHHHHHHH
Confidence 99999999887 88999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC---CCCceeeeEEEeeCCCcccccccceecce
Q 015042 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG---DKGYYIEPTIFTNVKEDMIIAKEEIFGPV 317 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv 317 (414)
++++|+|.++++++||+++..+++++++++++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||
T Consensus 308 ~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPv 387 (478)
T 3ty7_A 308 QVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPV 387 (478)
T ss_dssp TCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSE
T ss_pred hccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCccccCCCceeCCEEEecCCCCCcccCceeECce
Confidence 999999999999999999999999999999999999999999994322 37999999999999999999999999999
Q ss_pred EEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHHHh
Q 015042 318 MALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYK 397 (414)
Q Consensus 318 l~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~~~ 397 (414)
++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||+ ....+.+||||+|.||+|+++|++|+++
T Consensus 388 l~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~-~~~~~~~PfGG~k~SG~G~~~G~~~l~~ 466 (478)
T 3ty7_A 388 MSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINE-AGRKPDLPFGGYKQSGLGREWGDYGIEE 466 (478)
T ss_dssp EEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCSSEEEETT-CC----------------------CCGG
T ss_pred eEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECC-CCCCCCCCcCCcCcCcCCccchHHHHHH
Confidence 999999999999999999999999999999999999999999999999999 5566789999999999999999999999
Q ss_pred hheeeEEEe
Q 015042 398 YLQIKSVVT 406 (414)
Q Consensus 398 ~~~~k~i~~ 406 (414)
||++|+|+.
T Consensus 467 ~t~~k~v~~ 475 (478)
T 3ty7_A 467 FLEVKSIAG 475 (478)
T ss_dssp GEEEEEEET
T ss_pred hcCeEEEEE
Confidence 999999874
No 36
>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=1.9e-88 Score=689.09 Aligned_cols=405 Identities=35% Similarity=0.525 Sum_probs=379.5
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCccccc-CCCcccceeecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKM-SSELQGYTLREPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++.+.+...++..+. ..+...+.+++|+|||++|+
T Consensus 71 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~ 149 (486)
T 1t90_A 71 LFNFQQLLSQHKEELAHLITIENGKNTKEA-LGEVGRGIENVEFAAGAPSLMMGDSLASIATDVEAANYRYPIGVVGGIA 149 (486)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHTTHHHHHCEEEEEEEETTEEEEEEEEECSEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEecccCEEEEEC
Confidence 578999999999999999999999999976 4799999999999987766655554331 23446688999999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCC
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|++++ +.+.++.|+.||+||+|.||||
T Consensus 150 PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~I~fTGS 228 (486)
T 1t90_A 150 PFNFPMMVPCWMFPMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYG-AHDVVNGILEHPEIKAISFVGS 228 (486)
T ss_dssp CSSCTTHHHHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCC-SHHHHHHHHHCTTEEEEEEESC
T ss_pred CCchhHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCEEEEEEC-CHHHHHHHHhCCCCCEEEEeCC
Confidence 999999999999999999999999999999999999999999999999999999998 6678999999999999999999
Q ss_pred cHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCce-EEEeCchHHHHHHHHHHH
Q 015042 160 TDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSR-VFVQEGIYDKFEKKLLEK 238 (414)
Q Consensus 160 ~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~-i~V~~~i~d~f~~~l~~~ 238 (414)
+.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++| ||||++ +|+|+++|++.
T Consensus 229 ~~~g~~i~~~aa-~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~ 306 (486)
T 1t90_A 229 KPVGEYVYKKGS-ENLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGI-ADEFMAKLQEK 306 (486)
T ss_dssp HHHHHHHHHHHH-HTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHH-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-ccCCcEEeccCCCCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccCCeeEEecCC-HHHHHHHHHHH
Confidence 999999999988 889999999999999999999999999999999999999999999999 999999 99999999999
Q ss_pred HhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC-CCCceeeeEEEeeCCCcccccccceecce
Q 015042 239 AKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG-DKGYYIEPTIFTNVKEDMIIAKEEIFGPV 317 (414)
Q Consensus 239 ~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv 317 (414)
++++++|+|.++++++||+++..+++++.+++++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||
T Consensus 307 ~~~~~vG~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPv 386 (486)
T 1t90_A 307 VADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPV 386 (486)
T ss_dssp HTTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECSSSSCCSSSSCCCCEEEESCCTTSHHHHSCCCSSE
T ss_pred HHhcccCCCCccCCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCCEECCEEEeCCCCCCHhhcCcccCce
Confidence 99999999999999999999999999999999999999999999997432 36899999999999999999999999999
Q ss_pred EEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCC-CCCCCcccCCCCCCC--ccchHHH
Q 015042 318 MALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGF-SMDCPYGGYKMSGFG--REYGLES 394 (414)
Q Consensus 318 l~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~p~gG~~~sG~g--~~~g~~~ 394 (414)
++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++... .+.+||||+|.||+| +++|++|
T Consensus 387 l~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~G~~~~~g~~g 466 (486)
T 1t90_A 387 LSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAIRYFRENIDAGMLGINLGVPAPMAFFPFSGWKSSFFGTLHANGKDS 466 (486)
T ss_dssp EEEEEESSHHHHHHHHHHSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCCTTSCCCCEETTEESSSCSSHHHH
T ss_pred EEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCcCCCCcCCCCCCccchHHH
Confidence 9999999999999999999999999999999999999999999999999986543 468999999999999 8999999
Q ss_pred HHhhheeeEEEeeCC
Q 015042 395 LYKYLQIKSVVTPIY 409 (414)
Q Consensus 395 ~~~~~~~k~i~~~~~ 409 (414)
+++|++.|+|+.+.+
T Consensus 467 ~~~~~~~k~v~~~~~ 481 (486)
T 1t90_A 467 VDFYTRKKVVTARYP 481 (486)
T ss_dssp HHHTEEEEEEEEECC
T ss_pred HHHhhceEEEEEecC
Confidence 999999999988764
No 37
>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*
Probab=100.00 E-value=1.9e-87 Score=677.91 Aligned_cols=397 Identities=29% Similarity=0.420 Sum_probs=366.2
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcc----cccCCCcccceeecCCceEE
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEV----LKMSSELQGYTLREPVGVVG 76 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~----~~~~~~~~~~~~~~P~Gvv~ 76 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.++++++......... .....+...+++++|+|||+
T Consensus 46 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~ 125 (469)
T 3sza_A 46 LEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMIQKLPEWAADEPVEKTPQTQQDELYIHSEPLGVVL 125 (469)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHHHHHHHHHSCEECCCCGGGTTSEEEEEEEECSEEE
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCccccCCCccceeeccCCCEEE
Confidence 57899999999999999999999999998766799999998888876654332211 11112446788999999999
Q ss_pred EEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEE
Q 015042 77 HIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCF 156 (414)
Q Consensus 77 ~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~ 156 (414)
+|+|||||+...++++++||++||+||+|||+.+|.++..+++++.++ +|+|++|++++ +.+....|+.| ++|+|+|
T Consensus 126 ~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~a-lP~gvv~vv~g-~~~~~~~ll~~-~vd~I~F 202 (469)
T 3sza_A 126 VIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQY-LDKDLYPVING-GVPETTELLKE-RFDHILY 202 (469)
T ss_dssp EECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHH-SCTTTSCBCCC-SHHHHHHHTTS-CCSEEEE
T ss_pred EECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHh-CCcceEEEEEC-CHHHHHHHHhc-CCCEEEE
Confidence 999999999999999999999999999999999999999999999998 99999999999 44556677777 7999999
Q ss_pred eCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHH
Q 015042 157 TGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLL 236 (414)
Q Consensus 157 tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~ 236 (414)
|||+.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+
T Consensus 203 TGS~~vG~~i~~~aa-~~lkpv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~ 281 (469)
T 3sza_A 203 TGSTGVGKIIMTAAA-KHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLK 281 (469)
T ss_dssp ESCHHHHHHHHHHHH-TTTCCEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSCCEEEECGGGHHHHHHHHH
T ss_pred ECCHHHHHHHHHHHh-hccCceEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEehhHHHHHHHHHH
Confidence 999999999999988 8999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecc
Q 015042 237 EKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGP 316 (414)
Q Consensus 237 ~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 316 (414)
++++++ +|+|.++++++||+++..+++++.+++ +|+++++||... ..|+|++|||+.+++++|++++||+|||
T Consensus 282 ~~~~~~-~g~~~~~~~~~gpli~~~~~~rv~~~i-----~ga~v~~GG~~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGP 354 (469)
T 3sza_A 282 KSLKEF-YGEDAKKSRDYGRIISARHFQRVMGLI-----EGQKVAYGGTGD-AATRYIAPTILTDVDPQSPVMQEEIFGP 354 (469)
T ss_dssp HHHHHH-HCSCGGGCTTCCCCSCHHHHHHHHHHH-----TTSEEEECCCEE-TTTTEECCEEEESCCTTSGGGTSCCCSS
T ss_pred HHHHHh-cCCCCcccCcccccCCHHHHHHHHHHH-----cCCEEEeCCccC-CCCceeCCeeecCCCCcchhhhccccCC
Confidence 999998 699999999999999999999999998 589999999864 4799999999999999999999999999
Q ss_pred eEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC--CCCCCCcccCCCCCCCccchHHH
Q 015042 317 VMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFG--FSMDCPYGGYKMSGFGREYGLES 394 (414)
Q Consensus 317 vl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~p~gG~~~sG~g~~~g~~~ 394 (414)
|++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|.|+||++.. ..+.+||||+|.||+|+++|.+|
T Consensus 355 Vl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~~G~V~vN~~~~~~~~~~~PfGG~k~SG~Gr~~G~~g 434 (469)
T 3sza_A 355 VLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAANDVIVHITLHSLPFGGVGNSGMGSYHGKKS 434 (469)
T ss_dssp EEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHHHHHHCCCSEEEESCSSGGGSCTTSCBCCCGGGEECCBSTHHH
T ss_pred eEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHHHHHhCCcceEEEeCCCCCCCCCCCCcCCccccccCccchHHH
Confidence 9999999999999999999999999999999999999999999999999999863 46789999999999999999999
Q ss_pred HHhhheeeEEEeeC
Q 015042 395 LYKYLQIKSVVTPI 408 (414)
Q Consensus 395 ~~~~~~~k~i~~~~ 408 (414)
+++||+.|+|+++.
T Consensus 435 ~~~ft~~K~v~~~~ 448 (469)
T 3sza_A 435 FETFSHRRSCLVRP 448 (469)
T ss_dssp HHHTEEEEEEEECC
T ss_pred HHHhhCeeEEEECC
Confidence 99999999998763
No 38
>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}
Probab=100.00 E-value=1.3e-87 Score=681.55 Aligned_cols=408 Identities=31% Similarity=0.499 Sum_probs=378.1
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccc-c-CCCcccceeecCCceEEEE
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLK-M-SSELQGYTLREPVGVVGHI 78 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~-~-~~~~~~~~~~~P~Gvv~~i 78 (414)
|+++++.|++|+++|++++++|+||+..+ ..|+..+++.+++++....+....... . ..+...+..++|+|||++|
T Consensus 56 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~--~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I 133 (474)
T 4h7n_A 56 LQQWKQAILSRREQLTEALVNDTGRLSIT--VLEIDSFLASIDRWCGLAPELLQTSAKNTSIPFIALQQSLVPYPLVGVI 133 (474)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHHHSCSHHH--HHHHHHHHHHHHHHHHHHHHHHCCEEEECSSTTEEEEEEEEECSEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCcHHH--HHHHHHHHHHHHHHHhhhhhcccccccCCCCCCccceEEEEeccEEEEE
Confidence 57899999999999999999999998653 459999999999998887665443222 1 1344566788999999999
Q ss_pred cCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeC
Q 015042 79 IPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTG 158 (414)
Q Consensus 79 ~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tG 158 (414)
+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++ +.+.+..|+.| +|+|.|||
T Consensus 134 ~PwNfP~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~ag~p~gv~~~v~g-~~~~~~~l~~~--v~~v~FTG 210 (474)
T 4h7n_A 134 SPWNFPLTLSMIDTIPALLAGCAVVVKPSEIAPRFVAPLLMALNTVPELRDVLIFVEG-GGETGANLINY--VDFVCFTG 210 (474)
T ss_dssp ECSSSHHHHHHTTHHHHHHHTCEEEEEECTTSCTTHHHHHHHHTTCTTTTTTEEECCC-CHHHHHHHHTT--CSEEEEES
T ss_pred CCCCcHHHHHhcccCcchhcCCceeecccccCchHHHHHHhhhhhhcccccceeeccc-cchhhhhhhhc--cceEEecc
Confidence 9999999999999999999999999999999999999999999999999999999999 66788888876 89999999
Q ss_pred CcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHH
Q 015042 159 STDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEK 238 (414)
Q Consensus 159 s~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~ 238 (414)
|+.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++.
T Consensus 211 S~~~G~~i~~~aa-~~~~~v~lElGGk~p~iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~ 289 (474)
T 4h7n_A 211 SVATGREVAETAA-RRFIPAYLELGGKDPAIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAK 289 (474)
T ss_dssp CHHHHHHHHHHHH-HHTCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHH
T ss_pred ccchhhhhhhhhh-cccccccccCCCcCccccCchhhHHHHHHHHHhhhccCCCCceeecccccchHHHHHHHHHHHHHH
Confidence 9999999999988 889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC-CCCceeeeEEEeeCCCcccccccceecce
Q 015042 239 AKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG-DKGYYIEPTIFTNVKEDMIIAKEEIFGPV 317 (414)
Q Consensus 239 ~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv 317 (414)
++++++|+|.++++++||+++..+++++.+++++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||
T Consensus 290 ~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~v~~Gg~~~~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPV 369 (474)
T 4h7n_A 290 AHRLQLAYPLVEDGAIGPIIAEKQAGIINDHILDAVEKGAVIHCGGKVEELGGGWWCRPTVMTNVNHSMKVMTEETFGPI 369 (474)
T ss_dssp HHHCCBCCSSGGGCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCEEETTEEECCCEEEESCCTTSGGGTSCCCSSE
T ss_pred hhccccCCCcccccccCccccHHHHHHHHHHHHHHHhhCceeccCCcccccCCCcccCceeEEeeccccccccccccCcE
Confidence 99999999999999999999999999999999999999999999998653 46899999999999999999999999999
Q ss_pred EEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC--CCCCCCcccCCCCCCC-ccchHHH
Q 015042 318 MALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFG--FSMDCPYGGYKMSGFG-REYGLES 394 (414)
Q Consensus 318 l~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~p~gG~~~sG~g-~~~g~~~ 394 (414)
++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+... ..+..||||+|.||+| +++|.+|
T Consensus 370 l~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~v~iN~~~~~~~~~~~pfgG~~~SG~G~~~~G~~g 449 (474)
T 4h7n_A 370 MPVMPFPDVEEAVYLANDTIYGLSAAVFAGSEDEALKVARQLNAGAISINDAALTAMMHEGEKNAFNFSGLGGSRVGAAG 449 (474)
T ss_dssp EEEEEESSHHHHHHHHHCSSCCSEEEEECSSHHHHHHHHTTSCCSEEEESSSCGGGTCCCSCCCCCGGGEESCCSSTTHH
T ss_pred EEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEECCCCccCCcCCCCCCCcCCCCCCCCcchHHH
Confidence 999999999999999999999999999999999999999999999999998764 4578999999999998 7899999
Q ss_pred HHhhheeeEEEeeCC--CCCCC
Q 015042 395 LYKYLQIKSVVTPIY--NSPWL 414 (414)
Q Consensus 395 ~~~~~~~k~i~~~~~--~~~~~ 414 (414)
+++|+++|+|+++.. .+||+
T Consensus 450 ~~~f~~~k~v~~~~~~~~~p~w 471 (474)
T 4h7n_A 450 LKRFLRKQAFLIKTNSTSDPWW 471 (474)
T ss_dssp HHTTEEEEEEEEECSSSCCTTS
T ss_pred HHHhCeEEEEEECCCCCCCCCC
Confidence 999999999998754 56764
No 39
>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A
Probab=100.00 E-value=4.4e-87 Score=686.22 Aligned_cols=407 Identities=27% Similarity=0.434 Sum_probs=378.0
Q ss_pred CHHHHHHHHHh-HHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccc-cCCCcccceeecCCceEEEE
Q 015042 1 MWKFADLIEEH-VEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLK-MSSELQGYTLREPVGVVGHI 78 (414)
Q Consensus 1 L~~~a~~l~~~-~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~Gvv~~i 78 (414)
|+++++.|+++ +++|++++++|+|||..++...++..+++.+++++..++++.+.... ...+...+.++.|+|||++|
T Consensus 128 L~~~a~~l~~~~~~el~~~~~~e~Gk~~~ea~~e~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~p~GVV~~I 207 (563)
T 4e3x_A 128 FLKAADMLSGPRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGFVAAI 207 (563)
T ss_dssp HHHHHHHHHTTTHHHHHHHHHHHHCCCHHHHHHHTTHHHHHHHHHHHHHHHHHTTCCCCCCTTEEEEEECCBCSSEEEEE
T ss_pred HHHHHHHHHhccHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCcceEEEecCceEEEEE
Confidence 57899999999 99999999999999999865434999999999999998877654321 12234456778889999999
Q ss_pred cCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeC
Q 015042 79 IPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTG 158 (414)
Q Consensus 79 ~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tG 158 (414)
+|||||+....+++++|| +||+||+|||+.+|+++..++++|.++|+|+|+||++++++.++++.|+.||+|++|.|||
T Consensus 208 ~PwNfP~~~~~~~~apAL-aGNtVVlKPs~~tp~sa~~l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTG 286 (563)
T 4e3x_A 208 SPFNFTAIGGNLAGAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTG 286 (563)
T ss_dssp CCSSCHHHHHHHHHHHHH-TTCCEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEES
T ss_pred CCchHHHHHHHHHHHHhh-cCCEEEEECCCCChHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEEC
Confidence 999999999999999999 5999999999999999999999999999999999999998888999999999999999999
Q ss_pred CcHHHHHHHHHHHhcccc------eeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHH
Q 015042 159 STDVGRLVMQAAAASNLK------QVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFE 232 (414)
Q Consensus 159 s~~~g~~i~~~~a~~~~~------~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~ 232 (414)
|+.+|+.|++.++ .+++ |+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+
T Consensus 287 St~vG~~i~~~aa-~~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~V~~si~d~f~ 365 (563)
T 4e3x_A 287 SVPTFKHLWRQVA-QNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIK 365 (563)
T ss_dssp CHHHHHHHHHHHH-HTTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHH
T ss_pred CHHHHHHHHHHHH-hhCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEecchHHHHH
Confidence 9999999999988 6676 59999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcccCCC-CCCCCcccccCCHHHHHHHHHHHHHHHH-cCCEEEeCCcccCCCCceeeeEEEeeCCCcccccc
Q 015042 233 KKLLEKAKAWLVGDP-FDPTVRQGPQISERHFDRILSYIEHGKR-EGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAK 310 (414)
Q Consensus 233 ~~l~~~~~~~~~g~~-~~~~~~~gpl~~~~~~~~~~~~i~~a~~-~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~ 310 (414)
++|+++++++++|+| .|+++++||+++..+++++.++|+++++ +|+++++||......|+|++|||+.+++++|.+++
T Consensus 366 ~~l~~~~~~l~vGdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~~~~G~fv~PTvl~~v~~~~~i~~ 445 (563)
T 4e3x_A 366 GRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIMK 445 (563)
T ss_dssp HHHHHHHHTCCBSCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEECSSSCEECCEEEEESCTTCGGGT
T ss_pred HHHHHHHHhccCCCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccCCCCCcEecCEEEecCCCCChhhc
Confidence 999999999999999 9999999999999999999999999996 89999999987666899999999999999999999
Q ss_pred cceecceEEEEeeCC--HHHHHHHh-hcCCCCceEEEecCCHHHHHHHHHhcc--eeEEEEcCcCC--CCCCCCcccCCC
Q 015042 311 EEIFGPVMALMKFKT--VEEAIKSA-NNTQYGLAAGIVTKDLNVANTVSRSIR--AGIIWINCYFG--FSMDCPYGGYKM 383 (414)
Q Consensus 311 ~E~fgPvl~v~~~~~--~~eai~~~-n~~~~gl~~sv~s~d~~~~~~~~~~l~--~g~v~iN~~~~--~~~~~p~gG~~~ 383 (414)
||+||||++|++|+| +||||+++ |+++|||+++|||+|.+.+++++++++ +|+|+||+.+. ..+.+||||+|.
T Consensus 446 eEiFGPVl~V~~~~d~~~deAi~~ann~s~yGLta~V~t~d~~~~~~~~~~l~~~aG~v~IN~~~~~~~~~~~PFGG~k~ 525 (563)
T 4e3x_A 446 EEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARA 525 (563)
T ss_dssp SCCCSSEEEEEEECGGGHHHHHHHHHHSSSEESEEEEECSCHHHHHHHHHHTTTTCSEEEESSCSCCCCTTTSCCCCEET
T ss_pred CCCcCeEEEEEEECCCCHHHHHHHHHcCCCCCCEEEEEeCCHHHHHHHHHhhhcCeeEEEEcCCCCCCCcCCCCCCCccc
Confidence 999999999999997 79999999 789999999999999999999999976 99999999764 357899999999
Q ss_pred CCCC-ccchHHHHHhhheeeEEEeeCC
Q 015042 384 SGFG-REYGLESLYKYLQIKSVVTPIY 409 (414)
Q Consensus 384 sG~g-~~~g~~~~~~~~~~k~i~~~~~ 409 (414)
||+| +.+|++++++|+++|+|..++.
T Consensus 526 SG~g~~~~G~~~l~~~~~~k~v~~~~~ 552 (563)
T 4e3x_A 526 SGTNDKPGGPHYILRWTSPQVIKETHK 552 (563)
T ss_dssp TBCCCCTTSTTGGGGGBCCEEEEEECS
T ss_pred cCCCCccCCHHHHHHhCceEEEEEeCc
Confidence 9998 8999999999999999998873
No 40
>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*
Probab=100.00 E-value=1.1e-85 Score=664.42 Aligned_cols=394 Identities=29% Similarity=0.451 Sum_probs=366.3
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCc-cccc---CCCcccceeecCCceEE
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGE-VLKM---SSELQGYTLREPVGVVG 76 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~-~~~~---~~~~~~~~~~~P~Gvv~ 76 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.+++++...++.... .... ..+...+.+++|+|||+
T Consensus 56 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~ 135 (457)
T 3lns_A 56 LERLKEAVINNKEALYSALAEDLGKPKDVVDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTY 135 (457)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHHHCCCHHHHHHHTHHHHHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEE
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEE
Confidence 5789999999999999999999999999876569999999999999887665432 1211 13456789999999999
Q ss_pred EEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEE
Q 015042 77 HIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCF 156 (414)
Q Consensus 77 ~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~ 156 (414)
+|+|||||+...++++++||++||+||+|||+.+|.++..+++++.++ +|+|++|++++ +.+.++.|+. ++||+|+|
T Consensus 136 ~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~a-lP~gvv~vv~g-~~~~~~~L~~-~~vd~V~f 212 (457)
T 3lns_A 136 IIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEA-FAPEYVAVIQG-GRDENSHLLS-LPFDFIFF 212 (457)
T ss_dssp EECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHH-CCTTTEEECCC-CHHHHHHHTT-SCCSEEEE
T ss_pred EECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHh-CCHhhEEEecC-CHHHHHHHhc-CCCCEEEE
Confidence 999999999999999999999999999999999999999999999999 99999999999 7788899988 78999999
Q ss_pred eCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHH
Q 015042 157 TGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLL 236 (414)
Q Consensus 157 tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~ 236 (414)
|||+.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+
T Consensus 213 TGS~~~G~~i~~~aa-~~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~ 291 (457)
T 3lns_A 213 TGSPNVGKVVMQAAA-KHLTPVVLELGGKCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLV 291 (457)
T ss_dssp ESCHHHHHHHHHHHH-TTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHH
T ss_pred ECCHHHHHHHHHHHh-hccCceEEECCCCCCCeECCCCCHHHHHHHHHHHHHHhCCCCccCCceEEEcHHHHHHHHHHHH
Confidence 999999999999988 8999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecc
Q 015042 237 EKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGP 316 (414)
Q Consensus 237 ~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 316 (414)
+.+++++ |.++ ++||+++..+++++.++++++. +++++||... ..|+|+.|||+.+++++|.+++||+|||
T Consensus 292 ~~~~~~~---p~~~--~~gpli~~~~~~rv~~~i~~a~---~~~~~gg~~~-~~g~~~~Ptvl~~v~~~~~i~~eEiFGP 362 (457)
T 3lns_A 292 ERVKTEL---PEIN--STGKLVTERQVQRLVSLLEATQ---GQVLVGSQAD-VSKRALSATVVDGVEWNDPLMSEELFGP 362 (457)
T ss_dssp HHHHHHC---CSTT--TTCCCSSHHHHHHHHHHHHHCC---SEEEECCCEE-GGGTEECCEEEESCCTTSGGGSSCCCSS
T ss_pred HHHHhcC---CCcc--cccCCCCHHHHHHHHHHHHhcC---CeEEeCCccC-CCCceeCCEEEecCCCCChhhcCcccCc
Confidence 9999987 6665 9999999999999999999863 5999999754 3689999999999999999999999999
Q ss_pred eEEEEeeCCHHHHHHHhhc-CCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC--CCCCCCcccCCCCCCCccchHH
Q 015042 317 VMALMKFKTVEEAIKSANN-TQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFG--FSMDCPYGGYKMSGFGREYGLE 393 (414)
Q Consensus 317 vl~v~~~~~~~eai~~~n~-~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~p~gG~~~sG~g~~~g~~ 393 (414)
|++|++|+|+||||+++|+ ++|||++||||+|.+.++++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+
T Consensus 363 Vl~v~~~~~~deAi~~aN~~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~g~~ 442 (457)
T 3lns_A 363 ILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHGHF 442 (457)
T ss_dssp EEEEEEESCHHHHHHHHHHHSCSCSEEEEECSCHHHHHHHHHTSCCSEEEESCCSGGGGCTTSCBCCCGGGEECCBSHHH
T ss_pred EEEEEEeCCHHHHHHHHHcCCCCCeEEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCcCCcCcCCCCCCchHH
Confidence 9999999999999999999 999999999999999999999999999999999854 5688999999999999999999
Q ss_pred HHHhhheeeEEEee
Q 015042 394 SLYKYLQIKSVVTP 407 (414)
Q Consensus 394 ~~~~~~~~k~i~~~ 407 (414)
|+++||+.|+|++.
T Consensus 443 ~~~~f~~~k~v~~~ 456 (457)
T 3lns_A 443 SYLTFTHKKSVRIV 456 (457)
T ss_dssp HHHHTEEEEEEEEC
T ss_pred HHHHhhCeeEEEeC
Confidence 99999999998753
No 41
>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}
Probab=100.00 E-value=1.4e-85 Score=668.74 Aligned_cols=398 Identities=28% Similarity=0.419 Sum_probs=373.4
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccCCCcccceeecCCceEEEEcC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTLREPVGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++. .|+..+++.+++++...++..+...+...+...+.+++|+|||++|+|
T Consensus 70 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P 148 (490)
T 3ju8_A 70 LERFAATLKSRADELARVIGEETGKPLWESA-TEVTSMVNKVAISVQAFRERTGEKSGPLADATAVLRHKPHGVVAVFGP 148 (490)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHSCCEEEEETTEEEEEEEEECSEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCccccCCCCeeeEEECCCCEEEEECC
Confidence 5789999999999999999999999999864 699999999999998887766554432234456777999999999999
Q ss_pred CccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCCc
Q 015042 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++ +.+.++.|+.||+||+|+||||+
T Consensus 149 wN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~V~fTGS~ 227 (490)
T 3ju8_A 149 YNFPGHLPNGHIVPALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSS 227 (490)
T ss_dssp SSSTTHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHTTCCTTTEEECCC-SHHHHHHHHTCTTCSEEEEESCH
T ss_pred CcchHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEECcH
Confidence 99999999999999999999999999999999999999999999999999999999 67899999999999999999999
Q ss_pred HHHHHHHHHHHhccccee-EEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCch-HHHHHHHHHHH
Q 015042 161 DVGRLVMQAAAASNLKQV-SLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGI-YDKFEKKLLEK 238 (414)
Q Consensus 161 ~~g~~i~~~~a~~~~~~~-~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i-~d~f~~~l~~~ 238 (414)
.+|+.|++.++ .+++|+ ++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||+++ +|+|+++|+++
T Consensus 228 ~~g~~i~~~aa-~~~~~v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~ 306 (490)
T 3ju8_A 228 RTGNLLHSQFG-GQPQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAV 306 (490)
T ss_dssp HHHHHHHHHTT-TCTTSEEEEECCCCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEESSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhh-ccCCCcEEeecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCCEEEEECCccHHHHHHHHHHH
Confidence 99999999987 888998 8999999999999999999999999999999999999999999999996 99999999999
Q ss_pred HhhcccCC-CCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecce
Q 015042 239 AKAWLVGD-PFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGPV 317 (414)
Q Consensus 239 ~~~~~~g~-~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv 317 (414)
++++++|+ |.++++++||+++..+++++.+++++++++|+++++||...+..|+|++|||+. ++++|.+++||+||||
T Consensus 307 ~~~~~~G~~~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl~-v~~~~~i~~eEiFGPV 385 (490)
T 3ju8_A 307 SATLRVGRFDEQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGAALLTPGILD-VSAVAERPDEEFFGPL 385 (490)
T ss_dssp HHHCCBCCTTCSSCCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCCCSTTSCCCCCEEEE-CTTCSSCCCCCCCSSE
T ss_pred HHhccCCCCCCCCcCccccccCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCCEEccEEEE-eCCCCccccccccccE
Confidence 99999999 999999999999999999999999999999999999998766689999999998 9999999999999999
Q ss_pred EEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC-CCCCCCcccCCCCCCCccchHHHHH
Q 015042 318 MALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFG-FSMDCPYGGYKMSGFGREYGLESLY 396 (414)
Q Consensus 318 l~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~-~~~~~p~gG~~~sG~g~~~g~~~~~ 396 (414)
++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++.. ..+.+||||+|.||.+ +++
T Consensus 386 l~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~~~SG~~------~~~ 459 (490)
T 3ju8_A 386 LQVIRYSDFAAAIREANATQYGLAAGLLSDSRERFEQFLVESRAGIVNWNKQLTGAASSAPFGGIGASGNH------RPS 459 (490)
T ss_dssp EEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSCSSCCCTTSEECCCGGGBSS------CCE
T ss_pred EEEEEeCCHHHHHHHHhcCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCcCCCCCCCCcCCccccchh------HHH
Confidence 999999999999999999999999999999999999999999999999999875 4578999999999985 589
Q ss_pred hhheeeEEEeeC
Q 015042 397 KYLQIKSVVTPI 408 (414)
Q Consensus 397 ~~~~~k~i~~~~ 408 (414)
+|++.|+|+++.
T Consensus 460 ~~~~~k~v~~~~ 471 (490)
T 3ju8_A 460 AYYAADYCAYPV 471 (490)
T ss_dssp ETTHHHHHEEEE
T ss_pred hhheeEEEEEec
Confidence 999999988764
No 42
>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}
Probab=100.00 E-value=4.5e-85 Score=705.78 Aligned_cols=407 Identities=33% Similarity=0.541 Sum_probs=382.8
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCccccc-CCCcccceeecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKM-SSELQGYTLREPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++.+++++.+..... ..+..++..++|+|||++|+
T Consensus 596 L~~~Adll~~~~~eLa~~~~~E~GK~~~ea-~~Ev~~aid~lr~~a~~~~~~~~~~~~~~~~g~~~~~~~~PlGVV~~I~ 674 (1026)
T 4f9i_A 596 LLKAAQAARKRLFELSAWQVLEIGKQWDQA-YADVTEAIDFLEYYAREMIRLGQPQRVGHAPGELNHYFYEPKGVAAVIA 674 (1026)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHTCCCHHHH-HHHHHHHHHHHHHHHHHHHHHTSCEEECCCTTEEEEEEEEECSEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCChhhH-HHHHHHHHHHHHHHHHHHHHhcCCccccCCCCccceeEeecCceEEEeC
Confidence 578999999999999999999999999975 5699999999999999988775543322 34567788999999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCC
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|++++++.++++.|+.||+|++|+||||
T Consensus 675 PwNfPl~i~~~~~a~ALaaGNtVVlKPse~tplsa~~l~ell~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGS 754 (1026)
T 4f9i_A 675 PWNFPLAISMGMASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGS 754 (1026)
T ss_dssp CSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESC
T ss_pred CCccHHHHHHHHHHHHHHcCCEEEEEcCccchHHHHHHHHHHHHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCC
Confidence 99999999999999999999999999999999999999999999999999999999988889999999999999999999
Q ss_pred cHHHHHHHHHHHh-----cccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHH
Q 015042 160 TDVGRLVMQAAAA-----SNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKK 234 (414)
Q Consensus 160 ~~~g~~i~~~~a~-----~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~ 234 (414)
+.+|+.|++.++. ++++|+++|+|||||+||++|||++.|++.+++|+|.|+||.|++++++|||++++|+|+++
T Consensus 755 t~vg~~I~~~aa~~~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~~rl~V~~~i~d~f~~~ 834 (1026)
T 4f9i_A 755 METGLRIIERAAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIER 834 (1026)
T ss_dssp HHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHH
T ss_pred HHHHHHHHHHhhcccccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCCCCceEEecHHHHHHHHHH
Confidence 9999999998862 46799999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCccccccccee
Q 015042 235 LLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIF 314 (414)
Q Consensus 235 l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~f 314 (414)
|++.++++++|+|.++++++||+++..+++++.++|++++++| ++++||......|+|+.|||+.++++++.+++||+|
T Consensus 835 L~~~~~~l~vG~p~d~~t~~Gpvi~~~~~~~v~~~i~~a~~~G-~~v~gG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiF 913 (1026)
T 4f9i_A 835 LVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREG-HVLYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIF 913 (1026)
T ss_dssp HHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHHS-EEEEECCCCSSSSCCCCCEEEESCCTTSGGGTSCCC
T ss_pred HHHHHHhcccCCcccccCccccccCHHHHHHHHHHHHHHHhCC-eEEecCCcCCCCCceecceeeecCCCCccccCceec
Confidence 9999999999999999999999999999999999999999998 999999765445999999999999999999999999
Q ss_pred cceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC--CCCCCCcccCCCCCCC-ccch
Q 015042 315 GPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFG--FSMDCPYGGYKMSGFG-REYG 391 (414)
Q Consensus 315 gPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~p~gG~~~sG~g-~~~g 391 (414)
|||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||+.+. ..+.+||||+|.||+| +.+|
T Consensus 914 GPVl~V~~~~d~deAI~~aN~t~yGLt~~V~t~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~~~PFGG~k~SG~G~~~gG 993 (1026)
T 4f9i_A 914 GPVLAVMRAKDFDQAIEWANSTQFALTGGIFSRSPEHLAKARREFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAGG 993 (1026)
T ss_dssp SSEEEEEEESSHHHHHHHHTCSSCCSEEEEECCCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCCGGGBSSCCBTS
T ss_pred CcEEEEEEeCCHHHHHHHHHcCCCCCeEEEECCCHHHHHHHHHhCCEeeEEEcCCCCCCCCCCCCCCCcCcCCCCCCcCC
Confidence 999999999999999999999999999999999999999999999999999999765 3478999999999999 5789
Q ss_pred HHHHHhhheeeEEEeeCC
Q 015042 392 LESLYKYLQIKSVVTPIY 409 (414)
Q Consensus 392 ~~~~~~~~~~k~i~~~~~ 409 (414)
++++++|+++|+|..++.
T Consensus 994 ~~~l~~f~~~k~v~~~~~ 1011 (1026)
T 4f9i_A 994 PDYLLHFMDPRVVTENTM 1011 (1026)
T ss_dssp TTTGGGGEEEEEEEEECC
T ss_pred HHHHHHhceEEEEEEecc
Confidence 999999999999988763
No 43
>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*
Probab=100.00 E-value=1e-83 Score=661.42 Aligned_cols=401 Identities=23% Similarity=0.317 Sum_probs=362.6
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCc-------ccccC-CC-cccceeecC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGE-------VLKMS-SE-LQGYTLREP 71 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~-------~~~~~-~~-~~~~~~~~P 71 (414)
|+++++.|++|+++|++++++|+|||..++. .|+..+++.+++++.+++++.+. ..+.. .+ ...+.+++|
T Consensus 72 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P 150 (534)
T 2y53_A 72 LADIVKLLQAKRGDYYAIATANSGTTRNDSA-VDIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSP 150 (534)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEEEEEEEE
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHhccccccccCCccccCCCCCcccceEEEec
Confidence 5789999999999999999999999999865 59999999999999887665431 11211 11 135778999
Q ss_pred C-ceEEEEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcC-CCCCcEEEEeCCchhhHHHhhhCC
Q 015042 72 V-GVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAG-IPDGVLNVVPGFGPTAGAAICSHM 149 (414)
Q Consensus 72 ~-Gvv~~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG-~p~g~v~~v~~~~~~~~~~l~~~~ 149 (414)
+ |||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++| +|+|++|++++.+.++++.| +
T Consensus 151 ~~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~~l~~~l---~ 227 (534)
T 2y53_A 151 TRGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGSSAGLLDQI---R 227 (534)
T ss_dssp CSSCEEEECCTTCTTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHTCSCTTSEEECCSCCTTSGGGC---C
T ss_pred CCCEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCeEEEEeCChHHHHhcc---c
Confidence 7 99999999999999999999999999999999999999999999999999999 79999999998654333322 5
Q ss_pred CccEEEEeCCcHHHHHHHHHHH-hcccceeEEEcCCCCCceEcCCC-----CHHHHHHHHHHHhhccCCCCcccCceEEE
Q 015042 150 DIDYVCFTGSTDVGRLVMQAAA-ASNLKQVSLELGGKSPLLIFDDA-----DLDTAADVALLGNLYNKGEICVASSRVFV 223 (414)
Q Consensus 150 ~v~~v~~tGs~~~g~~i~~~~a-~~~~~~~~~e~gg~~~~iV~~da-----dl~~aa~~i~~~~~~~~Gq~C~a~~~i~V 223 (414)
++|+|.||||+.+|+.|++.++ .+++||+++|+|||||+||++|| |++.|++.+++++|.|+||.|++++||||
T Consensus 228 ~vd~V~FTGS~~~G~~i~~~aa~a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV 307 (534)
T 2y53_A 228 SFDVVSFTGSADTAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFV 307 (534)
T ss_dssp TTCEEEEESCHHHHHHHHTSHHHHTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSEEEEEE
T ss_pred ccCEEEEECCHHHHHHHHHhhhhhcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCCCEEEE
Confidence 7999999999999999998753 37899999999999999999999 99999999999999999999999999999
Q ss_pred eCchHHHHHHHHHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC------CCCceeeeE
Q 015042 224 QEGIYDKFEKKLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG------DKGYYIEPT 297 (414)
Q Consensus 224 ~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~------~~g~~~~Pt 297 (414)
|+++||+|+++|+++++++++|+|.++++++||+++..++++++++++++ .+|+++++||.... ..|+|++||
T Consensus 308 ~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a-~~ga~~~~GG~~~~~~~~~~~~g~~~~PT 386 (534)
T 2y53_A 308 PEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAAL-REEAVLAYDSSAVPLIDADANIAACVAPH 386 (534)
T ss_dssp EGGGHHHHHHHHHHHHTTCCBBCTTSTTCSBCCCSCHHHHHHHHHHHHHH-HTSSEEEEECTTSCCBSCCTTTSCCCCCE
T ss_pred eccHHHHHHHHHHHHHHhccCCCCCcCCCCccCCCCHHHHHHHHHHHHHH-HcCCEEEECCcccccccccCCCCceecCE
Confidence 99999999999999999999999999999999999999999999999999 68999999987421 368999999
Q ss_pred EEeeCCCc--ccccccceecceEEEEeeC---CH-----HHHHHHhhcCCCCceEEEecCCHHHHHHHHHhc--ceeEEE
Q 015042 298 IFTNVKED--MIIAKEEIFGPVMALMKFK---TV-----EEAIKSANNTQYGLAAGIVTKDLNVANTVSRSI--RAGIIW 365 (414)
Q Consensus 298 vl~~~~~~--~~~~~~E~fgPvl~v~~~~---~~-----~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l--~~g~v~ 365 (414)
|+.+++++ |.+++||+||||++|++|+ |+ ||||+++|+++|||++||||+|.+.++++++++ ++|+|+
T Consensus 387 vl~~v~~~~~~~i~~eEiFGPVl~v~~~~~~~~~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~~aG~V~ 466 (534)
T 2y53_A 387 LFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVH 466 (534)
T ss_dssp EEECSCGGGCSSTTTCCCSSSEEEEEEECCCCC---CTTHHHHHHHHTTSSEEEEEEECSCHHHHHHHHHHHTTTEEEEE
T ss_pred EEEecCccccCHHHhCCCcCCEEEEEEECCCCCcccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHHHhhCCEEE
Confidence 99999987 6899999999999999999 99 999999999999999999999999999999999 899999
Q ss_pred EcCcCC---------CCCCCCcccCCCCCCCcc-chHHHHHhhheeeEEEe
Q 015042 366 INCYFG---------FSMDCPYGGYKMSGFGRE-YGLESLYKYLQIKSVVT 406 (414)
Q Consensus 366 iN~~~~---------~~~~~p~gG~~~sG~g~~-~g~~~~~~~~~~k~i~~ 406 (414)
||++.. ..+.+||||+|.||+|++ +|.+++++|+++|+|..
T Consensus 467 vN~~~~~~~~~~~~~~~~~~pfGG~k~SG~Gr~~~g~~~l~~~~~~k~v~~ 517 (534)
T 2y53_A 467 AISPSVQHSQTGHGNVMPMSLHGGPGRAGGGEELGGLRALAFYHRRSAIQA 517 (534)
T ss_dssp EECGGGTTTCCCSSCCCTTSEECCSGGGCSCCEESGGGGGGGGEEEEEEEE
T ss_pred EcCCcccccccccCCCCCCCCCCCcccCCCCCCcchHHHHHHHhhhheeec
Confidence 998642 357899999999999999 69999999999999875
No 44
>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}
Probab=100.00 E-value=2.7e-82 Score=682.75 Aligned_cols=401 Identities=30% Similarity=0.453 Sum_probs=374.4
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcc--cccCCCcccceeecCCceEEEE
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEV--LKMSSELQGYTLREPVGVVGHI 78 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~--~~~~~~~~~~~~~~P~Gvv~~i 78 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++...++..+.. .+...+...+++++|+|||++|
T Consensus 578 L~~~ad~l~~~~~eLa~~~~~E~GK~~~ea-~~Ev~~ai~~lr~~a~~a~~~~g~~~~~~~~~g~~~~~~~~P~GVV~~I 656 (1001)
T 3haz_A 578 LEQAAHLLESRSAHFIALLQREGGKTLDDA-LSELREAADFCRYYAAQGRKLFGSETAMPGPTGESNALTMRGRGVFVAI 656 (1001)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHTTCCCHHHH-HHHHHHHHHHHHHHHHHHHHHHSSCEECCCCTTEEEEEEEEECSEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCChhHH-HHHHHHHHHHHHHHHHHHHhhcCccccccCCCCCceEEEEeCCcEEEEE
Confidence 578999999999999999999999999975 5699999999999999988766543 3333566788999999999999
Q ss_pred cCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeC
Q 015042 79 IPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTG 158 (414)
Q Consensus 79 ~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tG 158 (414)
+|||||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|++++++.+ ++.|+.||+||+|+|||
T Consensus 657 ~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~eAGlP~gvv~vV~G~g~~-g~~L~~~p~Vd~V~FTG 735 (1001)
T 3haz_A 657 SPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEAGIPKSALYLVTGDGRI-GAALTAHPDIAGVVFTG 735 (1001)
T ss_dssp CCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHHTCCTTTEEECCCCHHH-HHHHHHCTTCCEEEEES
T ss_pred cCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHHHhCcCcCcEEEEecCchH-HHHHHhCCCcCEEEecC
Confidence 99999999999999999999999999999999999999999999999999999999997766 99999999999999999
Q ss_pred CcHHHHHHHHHHHhc--ccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHH
Q 015042 159 STDVGRLVMQAAAAS--NLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLL 236 (414)
Q Consensus 159 s~~~g~~i~~~~a~~--~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~ 236 (414)
|+.+|+.|++.++.+ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|++.|+
T Consensus 736 St~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa~~iv~s~f~naGQ~C~A~~rllV~e~i~d~f~~~L~ 815 (1001)
T 3haz_A 736 STEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVADDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVA 815 (1001)
T ss_dssp CHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHHHHHHHHHHHhCCCCCCCCCceeeccHHHHHHHHHHHH
Confidence 999999999988732 479999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecc
Q 015042 237 EKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGP 316 (414)
Q Consensus 237 ~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 316 (414)
+.++++++|+|.++++++||+++..+++++.+++++++++| ++ +||... +.|+|+.|||+.+ +++.+++||+|||
T Consensus 816 ~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g-~v-~gg~~~-~~G~fv~PTvl~~--~~~~~~~eEiFGP 890 (1001)
T 3haz_A 816 GAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEA-RL-HFAGPA-PEGCFVAPHIFEL--TEAGQLTEEVFGP 890 (1001)
T ss_dssp HHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EE-EEECCC-CSSSCCCCEEEEC--SSGGGCCSCCCSS
T ss_pred HHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcC-eE-eccccC-CCCcEEeeEEecC--CCHHHHhccccCc
Confidence 99999999999999999999999999999999999999988 88 888754 3699999999974 6788999999999
Q ss_pred eEEEEeeCC--HHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC--CCCCCCcccCCCCCCC-ccch
Q 015042 317 VMALMKFKT--VEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFG--FSMDCPYGGYKMSGFG-REYG 391 (414)
Q Consensus 317 vl~v~~~~~--~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~p~gG~~~sG~g-~~~g 391 (414)
|++|++|++ ++|||+++|+++|||+++|||+|.+.++++++++++|+|+||++.. ..+.+||||+|.||+| +++|
T Consensus 891 VL~V~~~~~~~ldeAI~~aN~t~yGLta~V~T~d~~~a~~~a~~l~aG~V~VN~~~~~~~~~~~PFGG~k~SG~G~~~gG 970 (1001)
T 3haz_A 891 ILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQVGNIYVNRNMIGAVVGVQPFGGNGLSGTGPKAGG 970 (1001)
T ss_dssp EEEEEEECGGGHHHHHHHHHHTCCCSEEEEECSCHHHHHHHHHHCCCSEEEESSCSCCCCTTTSCBCCCGGGBCCCCBTS
T ss_pred EEEEEEeCCCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHhCCeeeEEEeCCCcCCCCCCCCCCCcccCcCCCCCCC
Confidence 999999996 8999999999999999999999999999999999999999999865 3467899999999999 5789
Q ss_pred HHHHHhhheeeEEEeeC
Q 015042 392 LESLYKYLQIKSVVTPI 408 (414)
Q Consensus 392 ~~~~~~~~~~k~i~~~~ 408 (414)
++++++|++.|+|+++.
T Consensus 971 ~~gl~~ft~~K~v~~~~ 987 (1001)
T 3haz_A 971 PHYLARFATEQTVTINT 987 (1001)
T ss_dssp TTSGGGGEEEEEEEEEC
T ss_pred HHHHHHhceeeEEEECC
Confidence 99999999999998875
No 45
>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}
Probab=100.00 E-value=4.6e-80 Score=633.53 Aligned_cols=390 Identities=24% Similarity=0.286 Sum_probs=353.4
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhh--cCcccc----c---CCCcccceeecC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKI--HGEVLK----M---SSELQGYTLREP 71 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~--~~~~~~----~---~~~~~~~~~~~P 71 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++..+++. .+..+. . ..+...+.+++|
T Consensus 91 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 169 (528)
T 3v4c_A 91 LRAIADEIEARAEAITEIGSQETGLPEARL-NGERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRP 169 (528)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEEEE
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHhhccccccccccccccccCCCCCcceeEeeC
Confidence 578999999999999999999999999875 469999999999999888762 222221 1 023456889999
Q ss_pred CceEEEEcCCccchHHHH--HhHHHHHhhCCeEEeecCCCChHHHHHHHHHH----HHcCCCCCcEEEEeCCchhhHHHh
Q 015042 72 VGVVGHIIPWNFPTTMFF--MKVSPALAAGCTMIVKPAEQTPLTALYYAHLA----KLAGIPDGVLNVVPGFGPTAGAAI 145 (414)
Q Consensus 72 ~Gvv~~i~p~n~P~~~~~--~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l----~~aG~p~g~v~~v~~~~~~~~~~l 145 (414)
+|||++|+|||||+...+ +++++||++||+||+|||+.+|.++..+++++ .++|+|+|++|++++.+.++++.|
T Consensus 170 ~GVv~~I~PwN~P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L 249 (528)
T 3v4c_A 170 VGPVAVFGASNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHAL 249 (528)
T ss_dssp CSCEEEECCSSSTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHH
T ss_pred CcEEEEECCCcchHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHH
Confidence 999999999999999865 89999999999999999999999999998865 578999999999999888899999
Q ss_pred hhCCCccEEEEeCCcHHHHHHHHHHHhccc--ceeEEEcCCCCCceEcCCC---CHHHHHHHHHHHhhccCCCCcccCce
Q 015042 146 CSHMDIDYVCFTGSTDVGRLVMQAAAASNL--KQVSLELGGKSPLLIFDDA---DLDTAADVALLGNLYNKGEICVASSR 220 (414)
Q Consensus 146 ~~~~~v~~v~~tGs~~~g~~i~~~~a~~~~--~~~~~e~gg~~~~iV~~da---dl~~aa~~i~~~~~~~~Gq~C~a~~~ 220 (414)
+.||+||+|+||||+.+|+.|++.++ +++ +|+++|+|||||+||++|| |++.|++.+++++|.|+||.|++++|
T Consensus 250 ~~~p~v~~V~fTGS~~~G~~i~~~aa-~~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~~r 328 (528)
T 3v4c_A 250 VQHPHIKAVGFTGSLAGGRALFDLCA-ARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGI 328 (528)
T ss_dssp HHCTTCCEEEEESCHHHHHHHHHHHH-HSSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGGGGCCTTCCCE
T ss_pred HhCCCCCEEEEECChHHHHHHHHHHh-hccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHHhcCCCccccCcE
Confidence 99999999999999999999999988 788 8999999999999999999 88999999999999999999999999
Q ss_pred EEEeCc-hHHHHHHHHHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEE
Q 015042 221 VFVQEG-IYDKFEKKLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIF 299 (414)
Q Consensus 221 i~V~~~-i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl 299 (414)
||||++ +||+|+++|++++++++.| +.+||+++..+.+++.++++ ++|+++++||.. .|+|++|||+
T Consensus 329 vlV~~~~i~d~f~~~l~~~~~~~~~~------~~~gp~~~~~~~~~v~~~~~---~~Ga~v~~gG~~---~g~~~~PTvl 396 (528)
T 3v4c_A 329 AVVIEGADADRFTTAAVEALAKVAPQ------TMLTDGIAKAYRDGQARFAT---RNAVKPLLATES---SGRDASPNLF 396 (528)
T ss_dssp EEEESSHHHHHHHHHHHHHHHTCCCE------ECSCHHHHHHHHHHHHHHHT---CTTCEEEECCCC---CTTEECCEEE
T ss_pred EEEecccHHHHHHHHHHHHHHhcccC------CCCCHHHHHHHHHHHHHHHH---hCCCEEEeCCCc---CCceeccEEE
Confidence 999997 9999999999999988643 57899998888877777653 479999999975 7999999999
Q ss_pred eeCCCc---ccccccceecceEEEEeeCCHHHHHHHhhcCCCCceEEEecC--CHHHHHHHHHhcc--eeEEEEcCcCC-
Q 015042 300 TNVKED---MIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTK--DLNVANTVSRSIR--AGIIWINCYFG- 371 (414)
Q Consensus 300 ~~~~~~---~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~--d~~~~~~~~~~l~--~g~v~iN~~~~- 371 (414)
.+++++ |.+++||+||||++|++|+|+||||+++|+++|||++||||+ |.+++++++++++ +|+|+||+++.
T Consensus 397 ~~~~~~~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~GL~a~v~t~d~d~~~a~~~a~~l~~~aG~V~vN~~~~~ 476 (528)
T 3v4c_A 397 ETTGAQFLADHALGEEVFGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLRPVLERKAGRVLVNGFPTG 476 (528)
T ss_dssp EEEHHHHHHCGGGGCCCSSSEEEEEEESSHHHHHHHHHHCCCEEEEEEECCGGGHHHHHHHHHHHHHHEEEEEESSCTTC
T ss_pred EecCcccccChhhcccccCCeEEEEecCCHHHHHHHHhcCCCCceEEEEcCCCCHHHHHHHHHHHhhcCcEEEEcCCCCC
Confidence 988887 899999999999999999999999999999999999999999 8999999999998 99999999754
Q ss_pred --CCCCCCccc-CCCCCCCccc--hHHHHHhhheeeEE
Q 015042 372 --FSMDCPYGG-YKMSGFGREY--GLESLYKYLQIKSV 404 (414)
Q Consensus 372 --~~~~~p~gG-~~~sG~g~~~--g~~~~~~~~~~k~i 404 (414)
..+.+|||| +|.||+|+++ |++|+++|+++|++
T Consensus 477 ~~~~~~~pfGG~~~~Sg~gr~~~~G~~gl~~~~~~k~~ 514 (528)
T 3v4c_A 477 VEVVDSMVHGGPYPASTNFGATSVGTMSIRRFLRPVAY 514 (528)
T ss_dssp CCCSTTCCCCCTTTTBSCTTCCSSSGGGGGGGEEEEEE
T ss_pred CccCCCCCCCCCCCCCCCCCCCCCcHHHHHHhchhHHh
Confidence 357899999 9999999975 99999999999975
No 46
>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*
Probab=100.00 E-value=1.4e-79 Score=627.45 Aligned_cols=389 Identities=22% Similarity=0.271 Sum_probs=352.2
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhh--hcCcccc----c--CCC-cccceeecC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADK--IHGEVLK----M--SSE-LQGYTLREP 71 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~--~~~~~~~----~--~~~-~~~~~~~~P 71 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++..+++ ..+..+. . ..+ ...+.+++|
T Consensus 58 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 136 (510)
T 1ez0_A 58 LRTIASELEARSDDIIARAHLETALPEVRL-TGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIA 136 (510)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEE
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEec
Confidence 578999999999999999999999999865 56999999999999988765 3332221 1 111 135789999
Q ss_pred CceEEEEcCCccchHHH--HHhHHHHHhhCCeEEeecCCCChHHHHHHHHHH----HHcCCCCCcEEEEeCCchhhHHHh
Q 015042 72 VGVVGHIIPWNFPTTMF--FMKVSPALAAGCTMIVKPAEQTPLTALYYAHLA----KLAGIPDGVLNVVPGFGPTAGAAI 145 (414)
Q Consensus 72 ~Gvv~~i~p~n~P~~~~--~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l----~~aG~p~g~v~~v~~~~~~~~~~l 145 (414)
+|||++|+|||||+... .+++++||++||+||+|||+.+|+++..+++++ .++|+|+|++|++++.+.++++.|
T Consensus 137 ~GVv~~I~PwN~P~~~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L 216 (510)
T 1ez0_A 137 LGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQAL 216 (510)
T ss_dssp CSCEEEECCSSCTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHH
T ss_pred CcEEEEECCccchhhhhhhHHHHHHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHH
Confidence 99999999999999985 499999999999999999999999999999987 568999999999999777889999
Q ss_pred hhCCCccEEEEeCCcHHHHHHHHHHHhccc--ceeEEEcCCCCCceEcCCCCHH--HHHHHHHHHhhccCCCCcccCceE
Q 015042 146 CSHMDIDYVCFTGSTDVGRLVMQAAAASNL--KQVSLELGGKSPLLIFDDADLD--TAADVALLGNLYNKGEICVASSRV 221 (414)
Q Consensus 146 ~~~~~v~~v~~tGs~~~g~~i~~~~a~~~~--~~~~~e~gg~~~~iV~~dadl~--~aa~~i~~~~~~~~Gq~C~a~~~i 221 (414)
+.||+||+|.||||+.+|+.|++.++ +++ +|+++|+|||||+||++|||++ .|++.+++++|.|+||.|++++||
T Consensus 217 ~~~p~v~~I~FTGS~~~G~~i~~~aa-~~l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rv 295 (510)
T 1ez0_A 217 VSHPEIKAVGFTGSVGGGRALFNLAH-ERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVV 295 (510)
T ss_dssp HHCTTCCEEEEESCHHHHHHHHHHHH-HSSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEE
T ss_pred HcCCCCCEEEEeCcHHHHHHHHHHhh-ccCCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCCCEE
Confidence 99999999999999999999999988 665 9999999999999999999999 999999999999999999999999
Q ss_pred EEeCc-hHHHHHHHHHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHH-cCCEEEeCCcccCCCCceeeeEEE
Q 015042 222 FVQEG-IYDKFEKKLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKR-EGATLLTGGKPIGDKGYYIEPTIF 299 (414)
Q Consensus 222 ~V~~~-i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~-~ga~v~~gg~~~~~~g~~~~Ptvl 299 (414)
|||++ ++|+|+++|++.++++++ ||++++.+.+++.++++++++ +|+++++||. .|+|++|||+
T Consensus 296 lV~~~~i~d~f~~~l~~~~~~~~~----------gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~----~g~~~~Ptvl 361 (510)
T 1ez0_A 296 FALNTPETQAFIETAQSLIRQQSP----------STLLTPGIRDSYQSQVVSRGSDDGIDVTFSQA----ESPCVASALF 361 (510)
T ss_dssp EEESSHHHHHHHHHHHHHHHHCCC----------BCCSSHHHHHHHHHHHHHHHTSTTEEEEECCC----CTTSBCCEEE
T ss_pred EEeCCccHHHHHHHHHHHHHhcCC----------CCCCCHHHHHHHHHHHHHHHhcCCCEEEecCC----CCCEecCEEE
Confidence 99999 999999999999998863 588888899999999999984 7999999996 2899999999
Q ss_pred eeCCCc---ccccccceecceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCH--HHHHHHHHhc--ceeEEEEcCcCC-
Q 015042 300 TNVKED---MIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDL--NVANTVSRSI--RAGIIWINCYFG- 371 (414)
Q Consensus 300 ~~~~~~---~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~--~~~~~~~~~l--~~g~v~iN~~~~- 371 (414)
.+++++ |.+++||+||||++|++|+|+||||+++|+++|||++||||+|. +.++++++++ ++|+|+||++..
T Consensus 362 ~~~~~~~~~~~i~~eEiFGPVl~v~~~~~~deai~~aN~~~~gLaa~v~t~d~~~~~a~~~~~~l~~~aG~V~iN~~~~~ 441 (510)
T 1ez0_A 362 VTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTG 441 (510)
T ss_dssp EEEHHHHHHCGGGGSCCCSSEEEEEEESSHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSC
T ss_pred EecCCccccCHHHcCCccCCeEEEEEeCCHHHHHHHHhcCCCCeEEEEEccCcCHHHHHHHHHHHhhcccEEEECCCCcc
Confidence 988777 99999999999999999999999999999999999999999987 7999999999 799999999765
Q ss_pred --CCCCCCccc-CCCCCCCc--cchHHHHHhhheeeEEE
Q 015042 372 --FSMDCPYGG-YKMSGFGR--EYGLESLYKYLQIKSVV 405 (414)
Q Consensus 372 --~~~~~p~gG-~~~sG~g~--~~g~~~~~~~~~~k~i~ 405 (414)
..+.+|||| +|.||.|+ .+|.+|+++|+++|++.
T Consensus 442 ~~~~~~~pfGG~~~~sG~g~~~~~G~~gl~~~~~~k~~~ 480 (510)
T 1ez0_A 442 VEVGYAMVHGGPYPASTHSASTSVGAEAIHRWLRPVAYQ 480 (510)
T ss_dssp CCCSSSCCCCCSTTSCSCSSCCSSSGGGGGGGEEEEEEE
T ss_pred CccCCCCCCCCCCCCcCCCCCCCccHHHHHHhheEEEEc
Confidence 457899999 79999985 47999999999998764
No 47
>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}
Probab=100.00 E-value=2.4e-75 Score=590.04 Aligned_cols=385 Identities=19% Similarity=0.220 Sum_probs=339.3
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccCCCcccceeecCCceEEEEcC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTLREPVGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+||+..++...+...+++.+..+....+ ..+ .+..+.+...+.+++|+|||++|+|
T Consensus 40 L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~~~~~~~~~~-~~g-~~~~~~~~~~~~~~~P~GVv~~I~P 117 (464)
T 3k9d_A 40 VKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHVYNYIKDMK-TIG-MLKEDNEKKVMEVAVPLGVVAGLIP 117 (464)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHTTCC-CSE-EEEEETTTTEEEEEEECCEEEEEEC
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHhhhccc-ccc-eeccCCCceeEEEEecceEEEEECC
Confidence 57899999999999999999999999987654455555544443332211 111 2222345678889999999999999
Q ss_pred CccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHH----HHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEE
Q 015042 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYA----HLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCF 156 (414)
Q Consensus 81 ~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~----~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~ 156 (414)
||||+...++++++||++||+||+|||+.+|.++..++ +++.++|+|+|+++++++++.+.++.|+.||+||+|+|
T Consensus 118 ~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~~~~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~f 197 (464)
T 3k9d_A 118 STNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILA 197 (464)
T ss_dssp SSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHHHHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEE
T ss_pred CcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEE
Confidence 99999999999999999999999999999999998765 45789999999999999988889999999999999999
Q ss_pred eCCcHHHHHHHHHHHhcccceeEEEcC-CCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHH
Q 015042 157 TGSTDVGRLVMQAAAASNLKQVSLELG-GKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKL 235 (414)
Q Consensus 157 tGs~~~g~~i~~~~a~~~~~~~~~e~g-g~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l 235 (414)
|||+.+ .+.++ ++++|+ +|+| ||+|+||++|||++.|++.+++++|+|+||.|+++++||||+++||+|+++|
T Consensus 198 TGs~~v----~~~a~-~~~kpv-lelG~G~~p~iV~~dADl~~Aa~~i~~~~~~n~Gq~C~a~~rvlV~~~i~d~f~~~l 271 (464)
T 3k9d_A 198 TGGSAM----VKAAY-SSGTPA-IGVGPGNGPAFIERSANIPRAVKHILDSKTFDNGTICASEQSVVVERVNKEAVIAEF 271 (464)
T ss_dssp CSCHHH----HHHHT-TSSSCE-EEBCCCCCEEEECTTSCHHHHHHHHHHHHTGGGGCSTTSCCEEEEEHHHHHHHHHHH
T ss_pred eCChHH----HHHHH-hcCCcE-EeeCCCCCeEEECCCCCHHHHHHHHHHHHhcCCCCCCCCCcEEEEeHHHHHHHHHHH
Confidence 999984 44454 788999 7887 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHH-------hhcccCCCC-CCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCccc
Q 015042 236 LEKA-------KAWLVGDPF-DPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMI 307 (414)
Q Consensus 236 ~~~~-------~~~~~g~~~-~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~ 307 (414)
+++. +.+++|+|. ++++++||+++.++++++.++++.++.+|+++++||.. +++++++
T Consensus 272 ~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~~~~~a~~~ga~vl~gg~~--------------~v~~~~~ 337 (464)
T 3k9d_A 272 RKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLAGLTVPADARVLIAEET--------------KVGAKIP 337 (464)
T ss_dssp HHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHHHTTCCCCTTCCEEEEECC--------------CCSTTCG
T ss_pred HHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHHHHhhhhhcCCCEEEEcCCC--------------CCCCCCc
Confidence 9885 456788887 77889999999999999999999999999999999864 4567787
Q ss_pred ccccceecceEEEEeeCCHHHHH----HHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC---------CCC
Q 015042 308 IAKEEIFGPVMALMKFKTVEEAI----KSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFG---------FSM 374 (414)
Q Consensus 308 ~~~~E~fgPvl~v~~~~~~~eai----~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~---------~~~ 374 (414)
+. +|+||||++|++|+|+|||| +++|+++|||+++|||+|.+.++++++++++|+|+||++.. ..+
T Consensus 338 ~~-~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~a~i~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~g~~~~~~~ 416 (464)
T 3k9d_A 338 YS-REKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIHSEDKEIIREFALKKPVSRLLVNTPGALGGIGATTNLVP 416 (464)
T ss_dssp GG-SCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHSSEEEEEESSCHHHHHTTSSSSSCC
T ss_pred cc-ccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEeCCHHHHHHHHHhCCEeEEEEECCccccccccCCCCCc
Confidence 65 79999999999999999997 79999999999999999999999999999999999999864 468
Q ss_pred CCCcccCCCCCCCccchHHHHHhhheeeEEEeeCC
Q 015042 375 DCPYGGYKMSGFGREYGLESLYKYLQIKSVVTPIY 409 (414)
Q Consensus 375 ~~p~gG~~~sG~g~~~g~~~~~~~~~~k~i~~~~~ 409 (414)
.+|||| +.+|.|+++|+.|+++|++.|+|.+..+
T Consensus 417 ~~~~G~-G~~G~g~~~~~~~~~~~~~~k~v~~~~~ 450 (464)
T 3k9d_A 417 ALTLGC-GAVGGSSSSDNIGPENLFNIRRIATGVL 450 (464)
T ss_dssp CSCBBC-TGGGTCSCCSBCCGGGSEEEEEEEECCC
T ss_pred cccccC-cCCCCCcCCCCCCHHHheEEEEEEecCC
Confidence 899998 7899999999999999999999988765
No 48
>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1
Probab=100.00 E-value=5.7e-76 Score=593.51 Aligned_cols=368 Identities=16% Similarity=0.164 Sum_probs=297.6
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCCh----HHHhhchHHH-HHHHHHHHHHhhhhhc------CcccccC---CCcccc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVY----LRAKTAEIPG-AAEFLRFFAGAADKIH------GEVLKMS---SELQGY 66 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~----~e~~~~ei~~-~~~~l~~~a~~~~~~~------~~~~~~~---~~~~~~ 66 (414)
|+++++.|++|+++|++++++|+|||. .++...|+.. +++.+++++...++.. +...+.. .+...+
T Consensus 42 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 121 (468)
T 1vlu_A 42 LYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQGIKDVAELEDPVGKVKMARELDDGLTLY 121 (468)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHHHHHHHHSCCSSSCEEEEEEEETTEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHHHHHHHHhhcCCCCCeecccccCCCCceeE
Confidence 578999999999999999999999998 6654468888 8888998888776654 3333311 244568
Q ss_pred eeecCCceEEEEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHH----H----cCCCCCcEEEEeCCc
Q 015042 67 TLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAK----L----AGIPDGVLNVVPGFG 138 (414)
Q Consensus 67 ~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~----~----aG~p~g~v~~v~~~~ 138 (414)
.+++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++..+++++. + +|+|+|++|+++ .+
T Consensus 122 ~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aL~e~~~~aGlP~gvv~vv~-~~ 198 (468)
T 1vlu_A 122 QVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREMAKIVNDTIAQFQSETGVPVGSVQLIE-TR 198 (468)
T ss_dssp EEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHHHHHHHHHHHHHHHHCCCTTSEEECC-CC
T ss_pred EEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHHHHhhchhcCCCCCcEEEEC-CH
Confidence 8999999999999999 9 9999999999999999999999999999999999995 8 999999999999 66
Q ss_pred hhhHHHhhhCCCccEEEEeCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccC
Q 015042 139 PTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVAS 218 (414)
Q Consensus 139 ~~~~~~l~~~~~v~~v~~tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~ 218 (414)
.++++.|..||+||+|+||||+.+|+.|++.+ ++|+++|+|||||+||++|||++.|++.+++++|.|+| .|+++
T Consensus 199 ~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a----~kpv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~G-~C~a~ 273 (468)
T 1vlu_A 199 QDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT----KIPVLGHADGICSIYLDEDADLIKAKRISLDAKTNYPA-GCNAM 273 (468)
T ss_dssp --CGGGGGCTTTCCEEEEESCHHHHHHHHHTC----CSCBTTBCSCCEEEEECTTCCHHHHHHHHHHTTCC-----CCCC
T ss_pred HHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc----CCCEEeecCCccceEECCCCCHHHHHHHHHHHhcCCCC-cCCcC
Confidence 67899999999999999999999999998764 69999999999999999999999999999999999999 99999
Q ss_pred ceEEEeCchHHHHHHHHHHHHhhccc---CCCCCCCCcccccCCHHHHHHHHHH-HHHHHHcCCEEEeCCcccCCCCcee
Q 015042 219 SRVFVQEGIYDKFEKKLLEKAKAWLV---GDPFDPTVRQGPQISERHFDRILSY-IEHGKREGATLLTGGKPIGDKGYYI 294 (414)
Q Consensus 219 ~~i~V~~~i~d~f~~~l~~~~~~~~~---g~~~~~~~~~gpl~~~~~~~~~~~~-i~~a~~~ga~v~~gg~~~~~~g~~~ 294 (414)
+|||||+++ |+|+++|++.++++++ |+|.+ +++ +++++ ++++||. | +
T Consensus 274 ~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~-----------------~~~~i~~a~----~~~~gG~-----g--~ 324 (468)
T 1vlu_A 274 ETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL-----------------KTAYFDKLN----ELGKLTE-----A--I 324 (468)
T ss_dssp EEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH-----------------HHHHHHHHH----HHTCCCH-----H--H
T ss_pred cEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH-----------------hcccccccc----eeeccCC-----C--C
Confidence 999999999 9999999999999987 76532 344 55554 3667775 4 7
Q ss_pred eeEEEeeCCCcccccccceecceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCC
Q 015042 295 EPTIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSM 374 (414)
Q Consensus 295 ~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~ 374 (414)
.||++ ++++|.+++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||++....+
T Consensus 325 ~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~ 402 (468)
T 1vlu_A 325 QCKTV--DADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKANAEKFMKGVDSSGVYWNASTRFAD 402 (468)
T ss_dssp HTTBC---------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCHHHHHHHHHHCCCSEEEESSCGGGCC
T ss_pred CCcee--eCCCchhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHhCCeeEEEEcCCCCCCC
Confidence 89997 7889999999999999999999999999999999999999999999999999999999999999999877778
Q ss_pred CCCcc-----cCCCCCCCccchHHHHHhhheeeEEEeeC
Q 015042 375 DCPYG-----GYKMSGFGREYGLESLYKYLQIKSVVTPI 408 (414)
Q Consensus 375 ~~p~g-----G~~~sG~g~~~g~~~~~~~~~~k~i~~~~ 408 (414)
.+||| |+|.||+|++ |++|+++|+++|+|+.+.
T Consensus 403 ~~pfG~Gg~~G~~~SG~g~~-G~~gl~~f~~~K~v~~~~ 440 (468)
T 1vlu_A 403 GFRYGFGAEVGISTSKIHAR-GPVGLDGLVSYQYQIRGD 440 (468)
T ss_dssp -----------------------CCSGGGEEEEEEEECS
T ss_pred CCCCCCCCCcceecCCCCCC-cchHHHHhcceEEEEECC
Confidence 89999 9999999999 999999999999998764
No 49
>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.1e-73 Score=576.03 Aligned_cols=359 Identities=18% Similarity=0.182 Sum_probs=308.1
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhc-------CCChHH---HhhchHHHHHHHHHHHHHhhhhhcCcccccC---CCcccce
Q 015042 1 MWKFADLIEEHVEELAALDALDA-------GKVYLR---AKTAEIPGAAEFLRFFAGAADKIHGEVLKMS---SELQGYT 67 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~et-------Gk~~~e---~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~---~~~~~~~ 67 (414)
|+++++.|++|+++|++++++|+ |||..+ ....|+..+++.+++++.++++..+...+.. .+...++
T Consensus 57 L~~~a~~l~~~~~ela~~~~~e~g~~~~~~Gk~~~~rl~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~ 136 (463)
T 2h5g_A 57 IHHLADLLTDQRDEILLANKKDLEEAEGRLAAPLLKRLSLSTSKLNSLAIGLRQIAASSQDSVGRVLRRTRIAKNLELEQ 136 (463)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHTTTSCHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTSTTCEEEEEEEETTEEEEE
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhhcccccCCCchhhhhhhhHHHHHHHHHHHHHHHHhhHhhcCcccccccCCCCceeEE
Confidence 57899999999999999999999 699873 1246999999999999988777666543321 2445688
Q ss_pred eecCCceEEEEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHc----CCCCCcEEEEeCCchhhHH
Q 015042 68 LREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLA----GIPDGVLNVVPGFGPTAGA 143 (414)
Q Consensus 68 ~~~P~Gvv~~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~a----G~p~g~v~~v~~~~~~~~~ 143 (414)
+++|+|||++|+||| |...+ +++++||++||+||+|||+.+|+++..+++++.++ | |+|++|++++ +.++++
T Consensus 137 ~~~P~GVv~~I~p~n-P~n~p-~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~G-P~gvv~vv~g-~~~~g~ 212 (463)
T 2h5g_A 137 VTVPIGVLLVIFESR-PDCLP-QVAALAIASGNGLLLKGGKEAAHSNRILHLLTQEALSIHG-VKEAVQLVNT-REEVED 212 (463)
T ss_dssp EEEECCEEEEEESSC-TTHHH-HHHHHHHHHTCEEEEECCGGGHHHHHHHHHHHHHHHHTTT-CGGGEEECCT-TCCC--
T ss_pred EEEcCceEEEEecCC-cHHHH-HHHHHHHHcCCEEEEECCCCcHHHHHHHHHHHHHHHHhcC-CCCeEEEEcC-CHHHHH
Confidence 999999999999887 77777 89999999999999999999999999999999999 9 9999999999 777899
Q ss_pred HhhhCCCccEEEEeCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEE
Q 015042 144 AICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFV 223 (414)
Q Consensus 144 ~l~~~~~v~~v~~tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V 223 (414)
.|+.||+||+|+||||+.+|+.|++.++ ++|+++|+|||||+||++|||++.|++.+++++|.| ||.|++++||||
T Consensus 213 ~L~~~p~vd~I~FTGS~~~G~~i~~~aa---l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~n-GQ~C~a~~rvlV 288 (463)
T 2h5g_A 213 LCRLDKMIDLIIPRGSSQLVRDIQKAAK---GIPVMGHSEGICHMYVDSEASVDKVTRLVRDSKCEY-PAACNALETLLI 288 (463)
T ss_dssp -----CCCSEEEEESCHHHHHHHHHHCS---SSCBCSCSCCCEEEEECTTCCTTTHHHHHHHHHHSC-TTSTTSEEEEEE
T ss_pred HHHhCCCcCEEEEECCHHHHHHHHHhcC---CCCEEEecCCcceEEEcCCCCHHHHHHHHHHHhccC-CCccccCcEEEE
Confidence 9999999999999999999999998864 899999999999999999999999999999999999 999999999999
Q ss_pred eCchHHHHHHHHHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCC
Q 015042 224 QEGIYDKFEKKLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVK 303 (414)
Q Consensus 224 ~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~ 303 (414)
|+++|| ||+ +.+++++++++|++++.|+... ..++|+ +
T Consensus 289 ~~~i~d-------------------------~p~--------~~~~i~~~~~~Ga~v~~G~~~~-~~g~~~--------~ 326 (463)
T 2h5g_A 289 HRDLLR-------------------------TPL--------FDQIIDMLRVEQVKIHAGPKFA-SYLTFS--------P 326 (463)
T ss_dssp EGGGTT-------------------------SHH--------HHHHHHHHHHTTCEEEECHHHH-C--------------
T ss_pred eccccc-------------------------hHH--------HHHHHHHHHhCCCEEEeCCccc-ccCccC--------C
Confidence 999998 233 2345778888999998555422 234442 5
Q ss_pred CcccccccceecceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCC
Q 015042 304 EDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKM 383 (414)
Q Consensus 304 ~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~ 383 (414)
++|.+++||+||||++|++|+|+||||+++|++++||++||||+|.+.++++++++++|+|+||++....+.+||||+|.
T Consensus 327 ~~~~i~~eE~FgPvl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~ 406 (463)
T 2h5g_A 327 SEVKSLRTEYGDLELCIEVVDNVQDAIDHIHKYGSSHTDVIVTEDENTAEFFLQHVDSACVFWNASTRFSDGYRFGLGAE 406 (463)
T ss_dssp ---CCSSCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGGCSTTTTTSSCC
T ss_pred CCchHHhccccCceEEEEEeCCHHHHHHHHHcCCCCceEEEEeCCHHHHHHHHHhCCeeEEEEeCCccCCCCCCCCCCcc
Confidence 78999999999999999999999999999999999999999999999999999999999999999877778899999999
Q ss_pred CCCC--cc--chHHHHHhhheeeEEEeeCC
Q 015042 384 SGFG--RE--YGLESLYKYLQIKSVVTPIY 409 (414)
Q Consensus 384 sG~g--~~--~g~~~~~~~~~~k~i~~~~~ 409 (414)
||+| ++ +|++|+++|+++|+|+.+.+
T Consensus 407 SG~G~~r~~~~G~~gl~~ft~~K~v~~~~~ 436 (463)
T 2h5g_A 407 VGISTSRIHARGPVGLEGLLTTKWLLRGKD 436 (463)
T ss_dssp SCEECCSSSCCEECCGGGGEEEEEEEECSS
T ss_pred CcCCCCcccCCCHHHHHHhceeEEEEECCC
Confidence 9999 65 99999999999999987653
No 50
>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}
Probab=100.00 E-value=1.6e-72 Score=566.11 Aligned_cols=360 Identities=22% Similarity=0.215 Sum_probs=305.2
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChH----HHhh-------chHHHHHHHHHHHHHhhhhhcCccccc---CCCcccc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYL----RAKT-------AEIPGAAEFLRFFAGAADKIHGEVLKM---SSELQGY 66 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~----e~~~-------~ei~~~~~~l~~~a~~~~~~~~~~~~~---~~~~~~~ 66 (414)
|+++++.|++|+++|++++++|+||+.. ++.. .|+..+++.+++++.+.+.. +...+. ..+...+
T Consensus 54 L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~~~~l~~~a~~~~~~-g~~~~~~~~~~~~~~~ 132 (444)
T 4ghk_A 54 LEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTMVEGLRQVATLPDPI-GEMSNLKYRPSGIQVG 132 (444)
T ss_dssp HHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHHHHHHHHHHHSCCCT-TCEEEEEECTTSCEEE
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHHHHHHHHHHhhcccc-CccCCcccCCCCccce
Confidence 5789999999999999999999999853 3221 37899999999999887543 443332 2345678
Q ss_pred eeecCCceEEEEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHH----HHcCCCCCcEEEEeCCch-hh
Q 015042 67 TLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLA----KLAGIPDGVLNVVPGFGP-TA 141 (414)
Q Consensus 67 ~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l----~~aG~p~g~v~~v~~~~~-~~ 141 (414)
++++|+|||++|+||| | ...++++++||++||+||+|||+.+|.++..+.+++ .++|+|+|+++++++.+. +.
T Consensus 133 ~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~~ 210 (444)
T 4ghk_A 133 QMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNTALAKLIGEGLAEAGLPQDTVQVVETADRAAV 210 (444)
T ss_dssp EEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEECCCCCTHHH
T ss_pred EEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHHHHHcCCCcccEEEEeCCCHHHH
Confidence 9999999999999998 8 688899999999999999999999999999999996 799999999999998654 57
Q ss_pred HHHhhhCCCccEEEEeCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceE
Q 015042 142 GAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRV 221 (414)
Q Consensus 142 ~~~l~~~~~v~~v~~tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i 221 (414)
++.|..||+||+|+||||+.+|+.+++.+ ++|+++|+|||||+||++|||++.|++.+++++|.|+| .|++++||
T Consensus 211 ~~~L~~~p~vd~V~fTGs~~vg~~v~~~a----~~pv~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rv 285 (444)
T 4ghk_A 211 GRLITMTEYVDVIVPRGGKSLIERLINEA----RVPMIKHLDGICHVYVDDRASVTKALTVCDNAKTHRYG-TCNTMETL 285 (444)
T ss_dssp HHHTTCTTTCSEEEECSCHHHHHHHHHHC----CSCBCCCCCCCCEEEECTTCCHHHHHHHCC----------CCCCCEE
T ss_pred HHHHhcCCCccEEEEECcHHHHHHHHHhC----CCCEEEEcCCcCeEEECCCCCHHHHHHHHHHHhcCCCc-ccCcCceE
Confidence 88888999999999999999999998764 69999999999999999999999999999999999999 99999999
Q ss_pred EEeCchHHHHHHHHHHHHhhccc---CCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEE
Q 015042 222 FVQEGIYDKFEKKLLEKAKAWLV---GDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTI 298 (414)
Q Consensus 222 ~V~~~i~d~f~~~l~~~~~~~~~---g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptv 298 (414)
|||+++||+|+++|++.++++++ |+|. ..++++++. .| +
T Consensus 286 lV~~~i~d~f~~~l~~~~~~~~~~~~g~p~-----------------~~~~i~~a~---------------~G------~ 327 (444)
T 4ghk_A 286 LVARGIAPAVLSPLGRLYREKGVELRVDAD-----------------ARAVLEAAG---------------VG------P 327 (444)
T ss_dssp EEEGGGHHHHHHHHHHHHHHTTCEEEECHH-----------------HHHHHHHTT---------------CC------C
T ss_pred EEeHHHHHHHHHHHHHHHHHcCCeecCCHH-----------------HHHHHHhcc---------------cC------c
Confidence 99999999999999999999887 6542 135555542 11 1
Q ss_pred EeeCCCcccccccceecceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCc
Q 015042 299 FTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPY 378 (414)
Q Consensus 299 l~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~ 378 (414)
+ +++++.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++..+.+..||
T Consensus 328 ~--~~~~~~~~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~pf 405 (444)
T 4ghk_A 328 L--VDATDEDWRTEYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAIVTEDHDRAMRFLREVDSASVMVNASTRFADGFEF 405 (444)
T ss_dssp C--EECCSGGGTCC---CEEEEEEESSHHHHHHHHHHHSCSSEEEEECSBHHHHHHHHHHCCSSEEEEEECGGGCSTTTT
T ss_pred c--cCCCchhhhccccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHhCCcceEEEcCCCccCCCCCc
Confidence 1 35678999999999999999999999999999999999999999999999999999999999999998887888999
Q ss_pred ccCCCCCCC----ccchHHHHHhhheeeEEEeeC
Q 015042 379 GGYKMSGFG----REYGLESLYKYLQIKSVVTPI 408 (414)
Q Consensus 379 gG~~~sG~g----~~~g~~~~~~~~~~k~i~~~~ 408 (414)
||.|+||+| +++|++|+++||++|+|+++.
T Consensus 406 Gg~~~sG~g~~~~~~~G~~gl~~~t~~K~v~~~~ 439 (444)
T 4ghk_A 406 GLGAEIGISNDKLHARGPVGLEGLTSLKYVVLGH 439 (444)
T ss_dssp TCSCCSEEECCSSSCCEEECGGGGEEEEEEEEEE
T ss_pred CCcccccccCCcccCCChhHHHhhceEEEEEECC
Confidence 999999998 678999999999999998764
No 51
>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1
Probab=100.00 E-value=1.2e-72 Score=564.40 Aligned_cols=359 Identities=20% Similarity=0.234 Sum_probs=315.9
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCCh----HHHh-------hchHHHHHHHHHHHHHhhhhhcCccccc---CCCcccc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVY----LRAK-------TAEIPGAAEFLRFFAGAADKIHGEVLKM---SSELQGY 66 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~----~e~~-------~~ei~~~~~~l~~~a~~~~~~~~~~~~~---~~~~~~~ 66 (414)
|+++++.|++|+++|++++++|+||+. .+.. ..|+..+++.+++++.+.++ .+...+. ..+...+
T Consensus 42 L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~~~~~l~~~a~~~~~-~g~~~~~~~~~~~~~~~ 120 (427)
T 1o20_A 42 IKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMIKACETVIGLKDP-VGEVIDSWVREDGLRIA 120 (427)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHHHHHHHHHHSCCC-TTCEEEEEECTTSCEEE
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHHHHHHHHHHHhcccc-cCccccccccCCCceeE
Confidence 578999999999999999999999885 3432 25899999999999987765 3443332 1234568
Q ss_pred eeecCCceEEEEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHH----HcCCCCCcEEEEeCC-chhh
Q 015042 67 TLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAK----LAGIPDGVLNVVPGF-GPTA 141 (414)
Q Consensus 67 ~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~----~aG~p~g~v~~v~~~-~~~~ 141 (414)
.+++|+|||++|+||| +...++++++||++||+||+|||+.+|+++..+++++. ++|+|+|++|++++. ..+.
T Consensus 121 ~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~~~l~~l~~~al~eaGlP~gvv~vv~g~~~~~~ 198 (427)
T 1o20_A 121 RVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSNKAIVSAIREALKETEIPESSVEFIENTDRSLV 198 (427)
T ss_dssp EEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHHTTSSSCGGGEEECCCCCTHHH
T ss_pred EEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHHHHHHHHHHHHHHHcCCCcccEEEecCCChHHH
Confidence 8999999999999875 57889999999999999999999999999999999987 689999999999984 4567
Q ss_pred HHHhhhCCCccEEEEeCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceE
Q 015042 142 GAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRV 221 (414)
Q Consensus 142 ~~~l~~~~~v~~v~~tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i 221 (414)
++.|..||+||+|.||||+.+|+.|++.+ .+|+++|+|||||+||++|||++.|++.+++++|.|+| .|++++||
T Consensus 199 ~~~L~~~~~v~~I~fTGS~~~G~~i~~~a----~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~f~n~G-~C~a~~rv 273 (427)
T 1o20_A 199 LEMIRLREYLSLVIPRGGYGLISFVRDNA----TVPVLETGVGNCHIFVDESADLKKAVPVIINAKTQRPG-TCNAAEKL 273 (427)
T ss_dssp HHHTTCTTTCSEEEECSCHHHHHHHHHHC----SSCBCCCCCCCEEEEECTTSCHHHHHHHHHHHHHSCTT-STTSEEEE
T ss_pred HHHHhCCCCccEEEeCCChHHHHHHHHhc----CCCEEEecCCCceEEEeCCCCHHHHHHHHHHHhccCCC-CCCCccEE
Confidence 88999999999999999999999999875 49999999999999999999999999999999999999 99999999
Q ss_pred EEeCchHHHHHHHHHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEee
Q 015042 222 FVQEGIYDKFEKKLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTN 301 (414)
Q Consensus 222 ~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~ 301 (414)
|||+++||+|+++|++.+++++++ ++||... .+ |+ |||
T Consensus 274 ~V~~~i~d~f~~~l~~~~~~~~~~-----------------------------------~~gg~~~--~~-~~-Ptl--- 311 (427)
T 1o20_A 274 LVHEKIAKEFLPVIVEELRKHGVE-----------------------------------VRGCEKT--RE-IV-PDV--- 311 (427)
T ss_dssp EEEHHHHHHHHHHHHHHHHHTTCE-----------------------------------EEECHHH--HH-HS-TTS---
T ss_pred EEehhhHHHHHHHHHHHHHHcCCe-----------------------------------eecChhh--hh-hC-Ccc---
Confidence 999999999999999999987652 1122211 12 33 886
Q ss_pred CCCcccccccceecceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccC
Q 015042 302 VKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGY 381 (414)
Q Consensus 302 ~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~ 381 (414)
+++++.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|.|+||++....+.+||||.
T Consensus 312 ~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGg~ 391 (427)
T 1o20_A 312 VPATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNASTRFTDGGQFGFG 391 (427)
T ss_dssp EECCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGGCSTTTTTCS
T ss_pred cCCCcchhhcccccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCCHHHHHHHHHhCCccEEEECCCCccCCCCCCCCc
Confidence 24578899999999999999999999999999999999999999999999999999999999999998777788999999
Q ss_pred CCCCCC----ccchHHHHHhhheeeEEEeeCC
Q 015042 382 KMSGFG----REYGLESLYKYLQIKSVVTPIY 409 (414)
Q Consensus 382 ~~sG~g----~~~g~~~~~~~~~~k~i~~~~~ 409 (414)
|+||+| +++|++|+++|+++|+|+.+.+
T Consensus 392 ~~SG~g~~~~~~~g~~gl~~~~~~k~v~~~~~ 423 (427)
T 1o20_A 392 AEIGISTQRFHARGPVGLRELTTYKFVVLGEY 423 (427)
T ss_dssp CCSCEECSSSSCCEECCTGGGEEEEEEEECSS
T ss_pred ccccccCCcccCCChHHHHHHhceEEEEECCC
Confidence 999997 4679999999999999988754
No 52
>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}
Probab=100.00 E-value=3.7e-71 Score=557.69 Aligned_cols=383 Identities=19% Similarity=0.243 Sum_probs=314.4
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHH-HHHHHhhhhhcCcccccCCCcccceeecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFL-RFFAGAADKIHGEVLKMSSELQGYTLREPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l-~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|+++++.|+|||..++...|+..+.+.+ ++++. .+. ...++.+.+...+.+++|+|||++|+
T Consensus 35 l~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~~~~~~--~~~-~g~~~~~~~~~~~~~~~P~GVv~~I~ 111 (452)
T 3my7_A 35 FRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYNKYKD--EQT-CGILEEDDNLGTMTIAEPVGIICGIV 111 (452)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHTT--CCC-SEEC-------CEEEEEECCEEEEEE
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhhh--ccc-cccccCCCCCceEEEecCceEEEEEc
Confidence 578999999999999999999999999987655777777766 33332 111 12223234456789999999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHH----HcCCCCCcEEEEeCCchhhHHHhhhCCCccEEE
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAK----LAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVC 155 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~----~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~ 155 (414)
|||||+...++++++||++||+||+|||+.+|.++..+++++. ++|+|+|+++++++++.+.++.|+.||+||+|+
T Consensus 112 P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~a~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~ 191 (452)
T 3my7_A 112 PTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALIL 191 (452)
T ss_dssp CTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHHHHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEE
T ss_pred CCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHHHHHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEE
Confidence 9999999999999999999999999999999999998887764 799999999999998888999999999999999
Q ss_pred EeCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHH
Q 015042 156 FTGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKL 235 (414)
Q Consensus 156 ~tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l 235 (414)
||||+..++ .++ ++++|+++|+|||+|+||++|||++.|++.+++++|+|+||.|+++++||||+++||+|+++|
T Consensus 192 fTGs~~~~~----~a~-~~~kp~~~e~gG~~p~iV~~dADl~~Aa~~iv~s~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l 266 (452)
T 3my7_A 192 ATGGPGMVK----AAY-SSGKPAIGVGAGNVPVVIDETADIKRAVASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERF 266 (452)
T ss_dssp ECSCHHHHH----HHH-TSSSCEEECC--CEEEEECTTSCHHHHHHHHHHGGGGGGGCCTTCEEEEEEEGGGHHHHHHHH
T ss_pred EECcHHHHH----HHH-hcCCCEEecCCCCCeEEEeCCCCHHHHHHHHHHHHhCCCCCccCCCcEEEEcHHHHHHHHHHH
Confidence 999998543 444 788999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccc---CCCCceeeeEE-------EeeCCCc
Q 015042 236 LEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPI---GDKGYYIEPTI-------FTNVKED 305 (414)
Q Consensus 236 ~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~---~~~g~~~~Ptv-------l~~~~~~ 305 (414)
+++ .||++++++++++.++++++...|+++ +||... ...|+|++||+ +.+++++
T Consensus 267 ~~~---------------~gpli~~~~~~~v~~~i~~~~~~~a~v-~G~~~~~~~~~~G~~v~pt~~vl~~~~~~~v~~~ 330 (452)
T 3my7_A 267 ASH---------------KAHVLSKTDADKVRKVLLIDGALNAKI-VGQPATAIAEMAGVKVPADTKVLIGEGLGKVSYD 330 (452)
T ss_dssp HTT---------------TEEECCHHHHHHHHHHHEETTEECGGG-TTCCHHHHHHHHTCCCCTTCCEEEEECSSSCCTT
T ss_pred HHh---------------CCCcCCHHHHHHHHHHHHhhcccCCeE-ecCccchhHHhCCceeCCCeeEEeeccccCCCCc
Confidence 874 389999999999999998776667776 466542 13589999997 5678889
Q ss_pred ccccccceecceEEEEeeCCHHHHHHHhhcCC----CCceEEEecCCHHHHHH---HHHhcceeEEEEcCcCCCC-----
Q 015042 306 MIIAKEEIFGPVMALMKFKTVEEAIKSANNTQ----YGLAAGIVTKDLNVANT---VSRSIRAGIIWINCYFGFS----- 373 (414)
Q Consensus 306 ~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~----~gl~~sv~s~d~~~~~~---~~~~l~~g~v~iN~~~~~~----- 373 (414)
+++.+ |+||||++|++|+|+||||+++|++. |||+++|||+|.+.+++ +++++++|+|+||++..+.
T Consensus 331 ~~~~~-E~FgPVl~v~~~~~~~eAi~~an~~~~~~g~Glta~i~t~d~~~a~~i~~~a~~l~~G~V~VN~~~~~Gg~G~~ 409 (452)
T 3my7_A 331 DAFAH-EKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLYTNQDVNADRIRYFGDKMKTARILINIPTTHGGIGDL 409 (452)
T ss_dssp CGGGS-CCSSSEEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEESCTTTCHHHHHHHHHHCCCSEEEESCCCC-------
T ss_pred chhhc-CccCcEEEEEEeCCHHHHHHHHHhcccccCCCCEEEEEcCCHHHHHHHHHHHHhCCEEEEEECCCCCCcccccc
Confidence 99876 89999999999999999999999985 99999999999887777 9999999999999986531
Q ss_pred ------CCCCcccCCCCCCCccchHHHHHhhheeeEEEeeCC
Q 015042 374 ------MDCPYGGYKMSGFGREYGLESLYKYLQIKSVVTPIY 409 (414)
Q Consensus 374 ------~~~p~gG~~~sG~g~~~g~~~~~~~~~~k~i~~~~~ 409 (414)
+.+++ |++..|.+..+++.+.+++.+.|+|..+..
T Consensus 410 ~~f~~~~~~t~-g~g~~Gg~~~~~nv~~~~l~n~~~v~~~~~ 450 (452)
T 3my7_A 410 YNFNVAPSLTL-GCGSWGGNSISENVGPKHLINKKTVAKRAE 450 (452)
T ss_dssp ----------------------CCCCCGGGGEEEEEEECCC-
T ss_pred cccCcCceEee-eccccCCCccCCCCChhHeeeeeEEEeecC
Confidence 11222 666777777888899999999999977653
No 53
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=97.75 E-value=0.018 Score=55.70 Aligned_cols=260 Identities=19% Similarity=0.178 Sum_probs=151.2
Q ss_pred CCcccceeecCCceEEEEcCC---ccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 015042 61 SELQGYTLREPVGVVGHIIPW---NFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGF 137 (414)
Q Consensus 61 ~~~~~~~~~~P~Gvv~~i~p~---n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~ 137 (414)
.|.....++.|+--|++..|. -||. ++++..+||-.+|..=|+--+|-. ....+.-+...+|+. .+..-.
T Consensus 113 ~Gv~~gq~~~Pi~rvGlYVPGG~a~ypS-svLM~aiPAkVAGV~~Iv~~tPp~--i~p~iL~AA~l~Gv~----eIy~vG 185 (434)
T 1kae_A 113 PGVRCQQVTRPVASVGLYIPGGSAPLFS-TVLMLATPASIAGCKKVVLCSPPP--IADEILYAAQLCGVQ----DVFNVG 185 (434)
T ss_dssp TTEEEEEEEEECSEEEEECCCSSSCCTH-HHHHHHHHHHHHTCSEEEEEECSS--CCHHHHHHHHHTTCC----EEEECC
T ss_pred CCcEEEEEEeehheEEEEecCCCCCchh-HHHHhhccHhhcCCCeEEEECCCC--CCHHHHHHHHHcCCC----EEeecc
Confidence 355566778899999999997 4664 555568899999987655433321 112233334556655 233322
Q ss_pred chhhHHHhh----hCCCccEEEEeCCcHHHHHHHHHHH-hcccceeEE-EcCCCCC--ceEcCCCCHHHHHHHHHHHhhc
Q 015042 138 GPTAGAAIC----SHMDIDYVCFTGSTDVGRLVMQAAA-ASNLKQVSL-ELGGKSP--LLIFDDADLDTAADVALLGNLY 209 (414)
Q Consensus 138 ~~~~~~~l~----~~~~v~~v~~tGs~~~g~~i~~~~a-~~~~~~~~~-e~gg~~~--~iV~~dadl~~aa~~i~~~~~~ 209 (414)
|.....+|. .-|.||.|+=.|..-+... ++.. ...+ .+-. -..|-+= +|-+++||.+..+..++.-+=+
T Consensus 186 GAQAIAAlAyGTetIp~VDkI~GPGN~yVa~A--Kr~Vs~~~G-~VgIDm~AGPSEilViAD~tAnp~~vAaDLLsQAEH 262 (434)
T 1kae_A 186 GAQAIAALAFGTESVPKVDKIFGPGNAFVTEA--KRQVSQRLD-GAAIDMPAGPSEVLVIADSGATPDFVASDLLSQAEH 262 (434)
T ss_dssp HHHHHHHHHHCCSSSCCCSEEECCCCHHHHHH--HHHHHHCTT-SCEESCCCCCCEEEEEECTTSCHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHcCCCCCCCccEEECCCcHHHHHH--HHHhHhhcC-ccccCCCCCCceEEEEeCCCCCHHHHHHHHHHHhcc
Confidence 444444443 2478999998888765321 1111 0011 1111 1112222 3445678999998888876555
Q ss_pred cCCCCcccCceEEEeCchHHHHHHHHHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCC
Q 015042 210 NKGEICVASSRVFVQEGIYDKFEKKLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGD 289 (414)
Q Consensus 210 ~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~ 289 (414)
..- .+.|+|..+ ++|.++..+.+.+..-.- | .. +.++.++.
T Consensus 263 d~~-----a~aiLvT~s--~~la~~V~~ev~~ql~~l---------p--r~-------~ia~~sl~-------------- 303 (434)
T 1kae_A 263 GPD-----SQVILLTPA--ADMARRVAEAVERQLAEL---------P--RA-------ETARQALN-------------- 303 (434)
T ss_dssp CTT-----CEEEEEESC--HHHHHHHHHHHHHHHTTC---------T--TH-------HHHHHHHT--------------
T ss_pred CCC-----CcEEEEECC--HHHHHHHHHHHHHHHHhC---------C--hH-------HHHHHHHH--------------
Confidence 432 445677655 455555555544321100 1 11 11222221
Q ss_pred CCceeeeEEEeeCCCcccccccceecceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcc-eeEEEEcC
Q 015042 290 KGYYIEPTIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIR-AGIIWINC 368 (414)
Q Consensus 290 ~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~-~g~v~iN~ 368 (414)
.- .++.++|++||++++|..-. =..-|.++|+ ..++.+++ +|.|++..
T Consensus 304 --------------------------~~-~ii~v~~l~ea~~~~N~~AP-EHLel~~~dp---~~~l~~I~nAGaIFlG~ 352 (434)
T 1kae_A 304 --------------------------AS-RLIVTKDLAQCVEISNQYGP-EHLIIQTRNA---RELVDSITSAGSVFLGD 352 (434)
T ss_dssp --------------------------TC-EEEECSSHHHHHHHHHHHCC-SEEEEESTTH---HHHGGGCCSCSEEEEST
T ss_pred --------------------------cC-eEEEECCHHHHHHHHHHhhh-HhhhhhhcCH---HHHHhhcCcccchhcCC
Confidence 11 36678999999999998432 2457888887 45667775 89999998
Q ss_pred cCC---------CCCCCCcccCCCCCCCccchHHHHHhhheeeEEE
Q 015042 369 YFG---------FSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVV 405 (414)
Q Consensus 369 ~~~---------~~~~~p~gG~~~sG~g~~~g~~~~~~~~~~k~i~ 405 (414)
++. .++-+|-+| +.++.+.-++..|+.+.++.
T Consensus 353 ~tpe~~GDY~aG~NHvLPT~G-----~AR~~sgLsV~~F~K~~s~~ 393 (434)
T 1kae_A 353 WSPESAGDYASGTNHVLPTYG-----YTATCSSLGLADFQKRMTVQ 393 (434)
T ss_dssp TCCHHHHHHTSSSCCCCCCTT-----GGGTCCCSCGGGGEEEEEEE
T ss_pred CCchhhcccccCCCcccCCCC-----ceeccCCCcHHhccceeeEE
Confidence 754 345677655 45666666788898877654
No 54
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=97.74 E-value=0.016 Score=55.88 Aligned_cols=261 Identities=18% Similarity=0.181 Sum_probs=149.8
Q ss_pred CCcccceeecCCceEEEEcCCc---cchHHHHHhHHHHHhhCCeEE--eecCCCChHHHHHHHHHHHHcCCCCCcEEEEe
Q 015042 61 SELQGYTLREPVGVVGHIIPWN---FPTTMFFMKVSPALAAGCTMI--VKPAEQTPLTALYYAHLAKLAGIPDGVLNVVP 135 (414)
Q Consensus 61 ~~~~~~~~~~P~Gvv~~i~p~n---~P~~~~~~~~~~aLaaGN~vv--~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~ 135 (414)
.|.....++.|+--|++..|.- ||. ++++..+||-.+|..=| ..|++.. .....+.-+...+|+. .+..
T Consensus 119 ~G~~~g~~~~Pi~~VGlYVPGG~A~ypS-svLM~aiPAkVAGV~~Iv~~tPp~~G-~i~p~iL~AA~l~Gv~----eIy~ 192 (423)
T 4gic_A 119 DGTLLGQKITPLDRVGLYVPGGKAAYPS-SVLMNAVPAKVAGVPELIMAVPAPRG-ELNALVLAAAYISGVD----RVFR 192 (423)
T ss_dssp TSCEEEEEEEECSEEEEECCCSTTCCHH-HHHHHHHHHHHHTCSEEEEECCCGGG-CCCHHHHHHHHHHTCC----EEEC
T ss_pred CCCEEEEEEEEecceeEEeeCCCCchhh-HHHHhhccHHHhCCCeEEEecCCCCC-CccHHHHHHHHhcCCc----EEEE
Confidence 5666778899999999999954 664 44556889999998733 3444321 1122233334456665 3333
Q ss_pred CCchhhHHHhhh----CCCccEEEEeCCcHHHHHHHHHHHhcccceeEEEcCCCCC-ceEcCCCCHHHHHHHHHHHhhcc
Q 015042 136 GFGPTAGAAICS----HMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLELGGKSP-LLIFDDADLDTAADVALLGNLYN 210 (414)
Q Consensus 136 ~~~~~~~~~l~~----~~~v~~v~~tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~-~iV~~dadl~~aa~~i~~~~~~~ 210 (414)
-.|.....+|.- -|.||.|+=.|+.-+.. +++.. ....-+=+..|---. +|-++++|.+..+..++.-+=+.
T Consensus 193 vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~--AKr~v-~g~VgIDm~AGPSEilViAD~~a~p~~vAaDLlsQAEHd 269 (423)
T 4gic_A 193 IGGAQAVAALAYGTETVPRVDKIVGPGNIYVAT--AKKLV-FGQVGIDMVAGPSEILVISDGRTDPDWIAMDLFSQAEHD 269 (423)
T ss_dssp CCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHH--HHHHH-BTTBEECCCCCCCEEEEEECSCSCHHHHHHHHHHHHTTC
T ss_pred cCChhhhhhhccCCCcccceeEEecCCcHHHHH--HHHHh-cCCcCcccccccceEEEEeCCCCCHHHHHHHHHHhhccC
Confidence 335554455544 67899999888876543 22222 111111111222222 34455689999998888766554
Q ss_pred CCCCcccCceEEEeCchHHHHHHHHHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHH-cCCEEEeCCcccCC
Q 015042 211 KGEICVASSRVFVQEGIYDKFEKKLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKR-EGATLLTGGKPIGD 289 (414)
Q Consensus 211 ~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~-~ga~v~~gg~~~~~ 289 (414)
.. .+.++|..+ ++|.++..+.+.+..-.-| ..+. ++.+.. .|
T Consensus 270 ~~-----a~~iLvT~s--~~la~~V~~~i~~~l~~l~-----------r~~i-------~~~sl~~~g------------ 312 (423)
T 4gic_A 270 ED-----AQAILISPD--AAHLEAVQASIERLLPGME-----------RAEV-------IRTSLERRG------------ 312 (423)
T ss_dssp TT-----CEEEEEESC--HHHHHHHHHHHHHHGGGCT-----------THHH-------HHHHHHHHC------------
T ss_pred CC-----CeEEEEeCc--HHHHHHHHHHHHHHHhhCc-----------cHHH-------HHHHHhcCc------------
Confidence 33 445777666 4555555555544211101 1111 111221 11
Q ss_pred CCceeeeEEEeeCCCcccccccceecceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcc-eeEEEEcC
Q 015042 290 KGYYIEPTIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIR-AGIIWINC 368 (414)
Q Consensus 290 ~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~-~g~v~iN~ 368 (414)
.++.++|++|+++++|..-. =..-|.++|++ .++.+++ +|.|++..
T Consensus 313 -----------------------------~ii~v~~~~ea~~~~N~~AP-EHLel~~~~~~---~~l~~i~nAGaIFlG~ 359 (423)
T 4gic_A 313 -----------------------------GMILVDDLEQAAAVANRIAP-EHLELSVESPE---VLVESIRNAGAIFMGR 359 (423)
T ss_dssp -----------------------------EEEECSSHHHHHHHHHHHCC-SEEEEESSCHH---HHGGGCCCCSEEEEC-
T ss_pred -----------------------------eEEEEeehHHHHHHHHhhCh-HHhhhhhCCHH---HHHhhCcEeceeecCC
Confidence 25567999999999998432 24567788874 5677776 89999987
Q ss_pred cCC---------CCCCCCcccCCCCCCCccchHHHHHhhheeeEEE
Q 015042 369 YFG---------FSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVV 405 (414)
Q Consensus 369 ~~~---------~~~~~p~gG~~~sG~g~~~g~~~~~~~~~~k~i~ 405 (414)
++. .++-+|-+ |..++.+.-++..|+.+.++.
T Consensus 360 ~tp~~~GDY~aG~NHvLPT~-----G~Ar~~sgLsv~~F~K~~s~~ 400 (423)
T 4gic_A 360 YTAEALGDYCAGPNHVLPTS-----GTARFSSPLGVYDFQKRSSLI 400 (423)
T ss_dssp ---------------CCCCT-----TGGGTCCCCCGGGGEEEEEEE
T ss_pred CCchhhhhcCcCCCccCCCC-----CcccccCCCCHHHeeeeeeEE
Confidence 643 23445654 455666666788898877653
No 55
>2fiu_A Conserved hypothetical protein; alpha-beta, dimeric alpha-beta barrels, structural genomics, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.58.4.16
Probab=63.73 E-value=22 Score=26.74 Aligned_cols=59 Identities=22% Similarity=0.336 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHHH-HcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecceEEEEeeCCHHHHHHHhhcCCC
Q 015042 260 ERHFDRILSYIEHGK-REGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQY 338 (414)
Q Consensus 260 ~~~~~~~~~~i~~a~-~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~ 338 (414)
.+.+++..+...... +.|++++..|.. |.++.+.. .+-+.|+.|+|.++|.++.|+.+|
T Consensus 17 ~e~y~~Y~~~~~~~~~~~gGr~l~~g~~---------~~~~eG~~-----------~~~~viieFpS~~aa~~~~~s~~Y 76 (99)
T 2fiu_A 17 SERYKDYVSTAKPAFERFGANFLARGGS---------VTELEGTA-----------RARNVVIEFPSVQHAIDCYNSPEY 76 (99)
T ss_dssp HHHHHHHHHHHHHHHHHTTCEEEEESCC---------EEEEESCC-----------CSEEEEEEESSHHHHHHHHHSHHH
T ss_pred HHHHHHHHHHHHHHHHHcCcEEEEECCC---------ceEEecCC-----------cCeEEEEECCCHHHHHHHHcCHHH
Confidence 333333333333333 357788876553 34443321 236789999999999999986544
No 56
>1s7i_A Hypothetical protein PA1349; structural genomics, protein structure initiative, pseudomon aeruginosa, MCSG, PSI; 1.80A {Pseudomonas aeruginosa} SCOP: d.58.4.9
Probab=61.86 E-value=34 Score=26.93 Aligned_cols=74 Identities=12% Similarity=0.188 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHHHHcCCEEEeCCcccCCCCcee-----eeEEEeeCCCcccccccceecceEEEEeeCCHHHHHHHhhc
Q 015042 261 RHFDRILSYIEHGKREGATLLTGGKPIGDKGYYI-----EPTIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANN 335 (414)
Q Consensus 261 ~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~-----~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~ 335 (414)
+..+...++.++..+.|.-+-.+|-.....+..+ +|+|..+.=.+ .+|..|= ++|+.++|.|||++++..
T Consensus 30 ~~~~~~~~~~~~l~~~G~lv~g~~L~~~~~a~~Vr~~~g~~~VtdGPfaE----tkE~lgG-~~iie~~s~deA~e~A~~ 104 (124)
T 1s7i_A 30 AIVDECMTYSDQLGKAGHYIASHALQSVQTATTLRHQGGRLAMTDGPFAE----TKEQLGG-FYLIEARDLNQALQIAAK 104 (124)
T ss_dssp HHHHHHHHHHHHHHHHTCEEEEEECCCGGGCEEEEECSSCEEEEESCSSC----CSSEEEE-EEEEEESSHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHCCEEEecCcCCCCcceEEEEecCCceeEecCCCcC----Cccccee-EEEEEeCCHHHHHHHHHh
Confidence 3455666666666666643322222211122222 23444322222 3355554 567799999999999998
Q ss_pred CCCC
Q 015042 336 TQYG 339 (414)
Q Consensus 336 ~~~g 339 (414)
.+..
T Consensus 105 ~P~~ 108 (124)
T 1s7i_A 105 IPPG 108 (124)
T ss_dssp CGGG
T ss_pred CCcc
Confidence 7654
No 57
>3v42_A Folliculin; tumor suppressor, protein binding; 2.00A {Homo sapiens}
Probab=61.82 E-value=9.4 Score=33.63 Aligned_cols=67 Identities=10% Similarity=0.161 Sum_probs=48.6
Q ss_pred HHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCCcHH
Q 015042 88 FFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDV 162 (414)
Q Consensus 88 ~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs~~~ 162 (414)
.+..++..+.+||-||++.+. +.....+..+|... +|.++++++.. +.+ ....-..+.+.++.+...
T Consensus 20 ~F~~l~~~vl~GnQiIVrg~~--~~~~~s~~~~L~~l-LP~~c~~l~~~-s~~----Y~~~~~cnilgls~~v~i 86 (226)
T 3v42_A 20 SFRMLAWHVLMGNQVIWKSRD--VDLVQSAFEVLRTM-LPVGCVRIIPY-SSQ----YEEAYRCNFLGLSPHVQI 86 (226)
T ss_dssp HHHHHHHHHHHTCEEEEECSC--HHHHHHHHHHHGGG-SCGGGCCEEEE-ESS----CCCTTTCSEEEECTTCCC
T ss_pred HHHHHHHHHhcCCEEEEEcCC--HHHHHHHHHHHHHh-CCHHHHhcccc-chh----hcchhheeeecCCCCccc
Confidence 345678888999999999987 66667778888888 99999999854 212 122234677777776654
No 58
>3lo3_A Uncharacterized conserved protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.38A {Colwellia psychrerythraea} SCOP: d.58.4.0
Probab=45.30 E-value=41 Score=24.94 Aligned_cols=24 Identities=17% Similarity=0.350 Sum_probs=20.2
Q ss_pred ceEEEEeeCCHHHHHHHhhcCCCC
Q 015042 316 PVMALMKFKTVEEAIKSANNTQYG 339 (414)
Q Consensus 316 Pvl~v~~~~~~~eai~~~n~~~~g 339 (414)
.-+.|+.|.|.+.|.++.|+.+|.
T Consensus 53 ~~~viieFps~~aa~a~y~SpeYq 76 (94)
T 3lo3_A 53 KAQVILEFPSREDAYNWYHSEEYQ 76 (94)
T ss_dssp SEEEEEEESSHHHHHHHHHSHHHH
T ss_pred CeEEEEECCCHHHHHHHHCCHHHH
Confidence 567899999999999999976553
No 59
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=42.80 E-value=19 Score=29.87 Aligned_cols=50 Identities=18% Similarity=0.224 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhC--CCccEEEEeCCcHHH
Q 015042 113 TALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSH--MDIDYVCFTGSTDVG 163 (414)
Q Consensus 113 ~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~--~~v~~v~~tGs~~~g 163 (414)
....+.+.+++.|...-...+++.+ ..+.+.+... .+.|.|+.||+...+
T Consensus 28 n~~~l~~~l~~~G~~v~~~~iv~Dd-~~i~~al~~a~~~~~DlVittGG~s~g 79 (164)
T 3pzy_A 28 CGPIITEWLAQQGFSSAQPEVVADG-SPVGEALRKAIDDDVDVILTSGGTGIA 79 (164)
T ss_dssp HHHHHHHHHHHTTCEECCCEEECSS-HHHHHHHHHHHHTTCSEEEEESCCSSS
T ss_pred HHHHHHHHHHHCCCEEEEEEEeCCH-HHHHHHHHHHHhCCCCEEEECCCCCCC
Confidence 4466788899999877777788776 6666665432 358999999998754
No 60
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=42.42 E-value=41 Score=27.54 Aligned_cols=114 Identities=16% Similarity=0.121 Sum_probs=69.2
Q ss_pred ceEEEEcCCcc-chHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHH-cCCCCCcEEEEeC-CchhhHHHhhhCC
Q 015042 73 GVVGHIIPWNF-PTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKL-AGIPDGVLNVVPG-FGPTAGAAICSHM 149 (414)
Q Consensus 73 Gvv~~i~p~n~-P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~-aG~p~g~v~~v~~-~~~~~~~~l~~~~ 149 (414)
|-|+++..-+- +-...+..-...+.+|..++-- .-|+ +.|++ .|++-..++-++. .++.+++.+ ..-
T Consensus 12 g~V~lsv~D~dK~~~v~~ak~~~~ll~Gf~l~AT-----~gTa----~~L~e~~Gl~v~~v~k~~eGG~p~I~d~I-~~g 81 (152)
T 1b93_A 12 KHIALVAHDHCKQMLMSWVERHQPLLEQHVLYAT-----GTTG----NLISRATGMNVNAMLSGPMGGDQQVGALI-SEG 81 (152)
T ss_dssp CEEEEEECGGGHHHHHHHHHHTHHHHTTSEEEEE-----TTHH----HHHHHHHCCCCEEECCGGGTHHHHHHHHH-HTT
T ss_pred CEEEEEEehhhHHHHHHHHHHHHHHhCCCEEEEc-----cHHH----HHHHHHhCceeEEEEecCCCCCchHHHHH-HCC
Confidence 65555544333 4444444556666678887752 2333 44555 8999666654432 233455555 556
Q ss_pred CccEEEEeCC-------cHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCC
Q 015042 150 DIDYVCFTGS-------TDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKG 212 (414)
Q Consensus 150 ~v~~v~~tGs-------~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~G 212 (414)
.||+|+||=+ ...+..|.+.+. ....|+..-+ ..|+.++.+.+++..
T Consensus 82 eIdlVInt~~pl~~~~h~~D~~~IrR~A~-~~~IP~~T~l---------------atA~a~v~ai~~~~~ 135 (152)
T 1b93_A 82 KIDVLIFFWDPLNAVPHDPDVKALLRLAT-VWNIPVATNV---------------ATADFIIQSPHFNDA 135 (152)
T ss_dssp CCCEEEEECCTTSCCTTHHHHHHHHHHHH-HTTCCEESSH---------------HHHHHHHTSGGGGSC
T ss_pred CccEEEEcCCcccCCcccccHHHHHHHHH-HcCCCEEeCH---------------HHHHHHHHHHhcccc
Confidence 7999999876 346778888877 6666755322 456777777777664
No 61
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=38.31 E-value=41 Score=27.07 Aligned_cols=63 Identities=10% Similarity=0.026 Sum_probs=42.1
Q ss_pred HHHHHHcCCCCCcEEEEeCC-c----hhhHHHhhhCCCccEEEEeCCc-----HHHHHHHHHHHhcccceeEEEc
Q 015042 118 AHLAKLAGIPDGVLNVVPGF-G----PTAGAAICSHMDIDYVCFTGST-----DVGRLVMQAAAASNLKQVSLEL 182 (414)
Q Consensus 118 ~~~l~~aG~p~g~v~~v~~~-~----~~~~~~l~~~~~v~~v~~tGs~-----~~g~~i~~~~a~~~~~~~~~e~ 182 (414)
++.|++.|+|-..++-++.. + +.+.+.+ ..-.||+|++|-+. ..+..|++.+. ....|++..+
T Consensus 60 a~~L~~~Gi~v~~v~k~~egg~~~~~~~i~d~i-~~g~i~lVInt~~~~~~~~~d~~~iRR~Av-~~~IP~~T~~ 132 (143)
T 2yvq_A 60 SDWLNANNVPATPVAWPSQEGQNPSLSSIRKLI-RDGSIDLVINLPNNNTKFVHDNYVIRRTAV-DSGIPLLTNF 132 (143)
T ss_dssp HHHHHHTTCCCEEECCGGGC-----CBCHHHHH-HTTSCCEEEECCCCCGGGHHHHHHHHHHHH-HTTCCEECSH
T ss_pred HHHHHHcCCeEEEEEeccCCCcccccccHHHHH-HCCCceEEEECCCCCCcCCccHHHHHHHHH-HhCCCeEcCH
Confidence 34557899997777666542 2 4455555 45569999998765 26777888777 6677766443
No 62
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=36.13 E-value=22 Score=30.23 Aligned_cols=52 Identities=19% Similarity=0.097 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhC--CCccEEEEeCCcHHH
Q 015042 112 LTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSH--MDIDYVCFTGSTDVG 163 (414)
Q Consensus 112 ~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~--~~v~~v~~tGs~~~g 163 (414)
.....+.+.+++.|...-...+++.+...+.+.+... .+.|.|+.||+...+
T Consensus 49 sn~~~L~~~L~~~G~~v~~~~iv~Dd~~~I~~al~~a~~~~~DlVIttGGts~g 102 (185)
T 3rfq_A 49 HSGPLVTELLTEAGFVVDGVVAVEADEVDIRNALNTAVIGGVDLVVSVGGTGVT 102 (185)
T ss_dssp SHHHHHHHHHHHTTEEEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEESCCSSS
T ss_pred cHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhCCCCEEEECCCCCCC
Confidence 3456788889999987666777776544455555432 468999999998754
No 63
>3hhl_A RPA0582; alpha-beta-barrel, structural genomics, PSI-2, protein struc initiative, reductive methylation; HET: MLY MLZ PGE 2PE PE8 1PE PG4; 2.65A {Rhodopseudomonas palustris} PDB: 3hhl_B* 3hhl_C* 3dca_A
Probab=35.91 E-value=77 Score=25.53 Aligned_cols=65 Identities=8% Similarity=0.071 Sum_probs=40.4
Q ss_pred cCCHHHHHHHHHHHHHHHH-cCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecceEEEEeeCCHHHHHHHhhc
Q 015042 257 QISERHFDRILSYIEHGKR-EGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANN 335 (414)
Q Consensus 257 l~~~~~~~~~~~~i~~a~~-~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~ 335 (414)
+.+.+.+++..+....+.. -|+++++.|.. +.++.+... |. ..-+.|+.|.|.+.|+++.++
T Consensus 45 vtd~e~y~~Y~~~~~~~l~~~GG~~l~rG~~---------~~~lEG~~~-------e~-~~~~viieFPS~~aa~a~y~S 107 (143)
T 3hhl_A 45 TTGAEAYAAYGRDSGPVSERLGGXVVWQGQF---------ELMLIGPQD-------EH-WDHVFIAEYPSVAAFVEMIRD 107 (143)
T ss_dssp CBHHHHHHHHHHHHHHHHHHTTCEEEEEEEE---------EEEEESCTT-------CC-CSEEEEEEESCHHHHHHHHHC
T ss_pred cCCHHHHHHHHHHHHHHHHHcCCEEEeecCC---------ceeEECCCC-------CC-CCeEEEEECCCHHHHHHHHcC
Confidence 4455566655555554443 48888876653 234433221 11 146789999999999999887
Q ss_pred CCC
Q 015042 336 TQY 338 (414)
Q Consensus 336 ~~~ 338 (414)
..|
T Consensus 108 peY 110 (143)
T 3hhl_A 108 PVY 110 (143)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 64
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=35.78 E-value=49 Score=27.47 Aligned_cols=52 Identities=19% Similarity=0.031 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhh---hCCCccEEEEeCCcHHH
Q 015042 112 LTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAIC---SHMDIDYVCFTGSTDVG 163 (414)
Q Consensus 112 ~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~---~~~~v~~v~~tGs~~~g 163 (414)
.....|.+.|.+.|+..-...+++.+...+.+++. ...+.|.|+.||+...+
T Consensus 40 ~ng~~L~~~L~~~G~~v~~~~iV~Dd~~~i~~al~~~~a~~~~DlVittGG~g~~ 94 (178)
T 3iwt_A 40 ESGDIIKQLLIENGHKIIGYSLVPDDKIKILKAFTDALSIDEVDVIISTGGTGYS 94 (178)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHTCTTCCEEEEESCCSSS
T ss_pred chHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhcCCCCEEEecCCcccC
Confidence 45677899999999886666777664444444443 34568999999998743
No 65
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=35.61 E-value=54 Score=29.41 Aligned_cols=88 Identities=11% Similarity=0.021 Sum_probs=53.2
Q ss_pred EEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCCcHHHHHHHHHHHhcc--cceeE
Q 015042 102 MIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASN--LKQVS 179 (414)
Q Consensus 102 vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs~~~g~~i~~~~a~~~--~~~~~ 179 (414)
+|.+|.+.+......+.+.|++.|+.- ....+|.|+.-|++.+-....+... .. .+|++
T Consensus 5 ii~n~~~~~~~~~~~l~~~l~~~g~~v------------------~~~~~D~vv~lGGDGT~l~aa~~~~-~~~~~~Pil 65 (272)
T 2i2c_A 5 ITSKGDEKSDLLRLNMIAGFGEYDMEY------------------DDVEPEIVISIGGDGTFLSAFHQYE-ERLDEIAFI 65 (272)
T ss_dssp EEECCSHHHHHHHHHHHHHHTTSSCEE------------------CSSSCSEEEEEESHHHHHHHHHHTG-GGTTTCEEE
T ss_pred EEECCCHHHHHHHHHHHHHHHHCCCEe------------------CCCCCCEEEEEcCcHHHHHHHHHHh-hcCCCCCEE
Confidence 445554333344455556666665531 0245799999999999888888775 33 56743
Q ss_pred -EEcCCCCCceEcCCCCHHHHHHHHHHHhh
Q 015042 180 -LELGGKSPLLIFDDADLDTAADVALLGNL 208 (414)
Q Consensus 180 -~e~gg~~~~iV~~dadl~~aa~~i~~~~~ 208 (414)
.-+|-.+.+-=....|++.+++.+..+.+
T Consensus 66 GIn~G~lgfl~~~~~~~~~~~l~~l~~g~~ 95 (272)
T 2i2c_A 66 GIHTGHLGFYADWRPAEADKLVKLLAKGEY 95 (272)
T ss_dssp EEESSSCCSSCCBCGGGHHHHHHHHHTTCC
T ss_pred EEeCCCCCcCCcCCHHHHHHHHHHHHcCCC
Confidence 44444332211124578889999887743
No 66
>1b4b_A Arginine repressor; core, oligomerization domain, helix TUR; HET: ARG; 2.20A {Geobacillus stearothermophilus} SCOP: d.74.2.1
Probab=34.55 E-value=74 Score=22.14 Aligned_cols=56 Identities=9% Similarity=0.102 Sum_probs=39.5
Q ss_pred hCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCCcHHHHHHHHHH
Q 015042 98 AGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAA 170 (414)
Q Consensus 98 aGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs~~~g~~i~~~~ 170 (414)
++|-+|+|..|.. +..++.++.+.++|+ ++..+.|++ -.++.+=+...+..+.+..
T Consensus 12 ~~n~vVikT~pG~---A~~va~~iD~~~~~e-I~GTIAGDD-------------TIlvi~r~~~~a~~l~~~i 67 (71)
T 1b4b_A 12 TGNLLVLRTLPGN---AHAIGVLLDNLDWDE-IVGTICGDD-------------TCLIICRTPKDAKKVSNQL 67 (71)
T ss_dssp ETTEEEEEESTTC---HHHHHHHHHHHCCTT-EEEEEECSS-------------EEEEEESSHHHHHHHHHHH
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEeeCC-------------EEEEEECCHHHHHHHHHHH
Confidence 6899999998655 677888898887775 888888743 1344455555666665544
No 67
>2zfz_A Arginine repressor; DNA binding protein, core, oligomeriza domain, alpha/beta topology, structural genomics; HET: ARG; 1.85A {Mycobacterium tuberculosis} PDB: 3bue_A 3cag_A*
Probab=33.94 E-value=78 Score=22.55 Aligned_cols=36 Identities=22% Similarity=0.400 Sum_probs=29.4
Q ss_pred hCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 015042 98 AGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGF 137 (414)
Q Consensus 98 aGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~ 137 (414)
++|-+|+|..|-. +..++.++....+|+ ++..+.|+
T Consensus 20 ~~n~vVikT~PG~---A~~vA~~iD~~~~~e-IlGTIAGD 55 (79)
T 2zfz_A 20 SGNLAVLRTPPGA---AHYLASAIDRAALPQ-VVGTIAGD 55 (79)
T ss_dssp ETTEEEEECSTTC---HHHHHHHHHHHCCTT-EEEEEECS
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEecC
Confidence 6999999998655 677888898887775 88888874
No 68
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=32.61 E-value=2.4e+02 Score=25.78 Aligned_cols=104 Identities=17% Similarity=0.179 Sum_probs=59.1
Q ss_pred eEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCch-hh---HHHhhhCCCccEEEEeCCcHHHHHHHHHHHh---c
Q 015042 101 TMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGP-TA---GAAICSHMDIDYVCFTGSTDVGRLVMQAAAA---S 173 (414)
Q Consensus 101 ~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~-~~---~~~l~~~~~v~~v~~tGs~~~g~~i~~~~a~---~ 173 (414)
.+|++|..........+.+.|.+.|.. +.+...... .. ...+.. ...|.|+..|++.+-..+.+.... .
T Consensus 33 ~vi~Np~sg~~~~~~~i~~~l~~~g~~---~~~~~t~~~~~~~~~~~~~~~-~~~d~vvv~GGDGTl~~v~~~l~~~~~~ 108 (332)
T 2bon_A 33 LLILNGKSTDNLPLREAIMLLREEGMT---IHVRVTWEKGDAARYVEEARK-FGVATVIAGGGDGTINEVSTALIQCEGD 108 (332)
T ss_dssp EEEECSSSTTCHHHHHHHHHHHTTTCC---EEEEECCSTTHHHHHHHHHHH-HTCSEEEEEESHHHHHHHHHHHHHCCSS
T ss_pred EEEECCCCCCCchHHHHHHHHHHcCCc---EEEEEecCcchHHHHHHHHHh-cCCCEEEEEccchHHHHHHHHHhhcccC
Confidence 345566544323345566777777775 333332111 11 112222 346899999999999998887752 1
Q ss_pred cccee-EEEcCCCCCce-EcC-CCCHHHHHHHHHHHhh
Q 015042 174 NLKQV-SLELGGKSPLL-IFD-DADLDTAADVALLGNL 208 (414)
Q Consensus 174 ~~~~~-~~e~gg~~~~i-V~~-dadl~~aa~~i~~~~~ 208 (414)
...|+ ++-+|--|-+. -.. ..|++.+++.+..+..
T Consensus 109 ~~~plgiiP~Gt~N~fa~~l~i~~~~~~al~~i~~g~~ 146 (332)
T 2bon_A 109 DIPALGILPLGTANDFATSVGIPEALDKALKLAIAGDA 146 (332)
T ss_dssp CCCEEEEEECSSSCHHHHHTTCCSSHHHHHHHHHHSEE
T ss_pred CCCeEEEecCcCHHHHHHhcCCCCCHHHHHHHHHcCCe
Confidence 23343 34455555222 122 3479999999887755
No 69
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=32.40 E-value=26 Score=28.08 Aligned_cols=78 Identities=15% Similarity=0.095 Sum_probs=47.2
Q ss_pred hHHHHHhhCCeEEeecCCCChHHHHHHHHHHHH-cCCCCCcEEEEe-CCchhhHHHhhhCCCccEEEEeCC-------cH
Q 015042 91 KVSPALAAGCTMIVKPAEQTPLTALYYAHLAKL-AGIPDGVLNVVP-GFGPTAGAAICSHMDIDYVCFTGS-------TD 161 (414)
Q Consensus 91 ~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~-aG~p~g~v~~v~-~~~~~~~~~l~~~~~v~~v~~tGs-------~~ 161 (414)
.-...+.+|..++- |.-|+.. |++ .|++-..++-++ +.++.+.+.+ ..-.||+|+||=+ ..
T Consensus 23 ~~~~~ll~Gf~l~A-----T~gTa~~----L~e~~Gl~v~~v~k~~~eG~p~I~d~I-~~geIdlVInt~~pl~~~~h~~ 92 (134)
T 2xw6_A 23 QRHREVLARFPLVA-----TGTTGRR----IEEATGLTVEKLLSGPLGGDQQMGARV-AEGRILAVIFFRDPLTAQPHEP 92 (134)
T ss_dssp HHTHHHHTTSCEEE-----CHHHHHH----HHHHHCCCCEECSCGGGTHHHHHHHHH-HTTCEEEEEEECCTTTCCTTSC
T ss_pred HHHHHHhCCCEEEE-----ccHHHHH----HHHhhCceEEEEEecCCCCcchHHHHH-HCCCccEEEEccCcccCCCccc
Confidence 33444556666554 3445444 444 799976666555 4234455555 5567999999977 23
Q ss_pred HHHHHHHHHHhcccceeE
Q 015042 162 VGRLVMQAAAASNLKQVS 179 (414)
Q Consensus 162 ~g~~i~~~~a~~~~~~~~ 179 (414)
.+..|.+.+. ....|+.
T Consensus 93 D~~~IrR~A~-~~~IP~~ 109 (134)
T 2xw6_A 93 DVQALLRVCD-VHGVPLA 109 (134)
T ss_dssp CSHHHHHHHH-HHTCCEE
T ss_pred hHHHHHHHHH-HcCCCeE
Confidence 4567777776 5556654
No 70
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=32.34 E-value=48 Score=26.30 Aligned_cols=48 Identities=15% Similarity=0.065 Sum_probs=30.9
Q ss_pred CcEEEEeCCchhhHHHhhhCCCccEEEEeCCcHHHHHHHHHHHhcccce
Q 015042 129 GVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQ 177 (414)
Q Consensus 129 g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs~~~g~~i~~~~a~~~~~~ 177 (414)
+.+.+++|+..+........+++.++++||+...-..+.+.+. ....|
T Consensus 53 ~~l~I~~G~r~~~~l~a~~~~~~~~iIlt~g~~~~~~i~~~A~-~~~ip 100 (139)
T 2ioj_A 53 NAALVTGGDRSDLLLTALEMPNVRCLILTGNLEPVQLVLTKAE-ERGVP 100 (139)
T ss_dssp SEEEEEETTCHHHHHHHTTCTTEEEEEEETTCCCCHHHHHHHH-HHTCC
T ss_pred CEEEEEcCCHHHHHHHHHhCCCCcEEEEcCCCCCCHHHHHHHH-HCCCe
Confidence 4677777755554433333256899999999877777776664 33334
No 71
>1xxa_A ARGR, arginine repressor; complex (DNA binding protein/peptide); HET: ARG; 2.20A {Escherichia coli K12} SCOP: d.74.2.1 PDB: 1xxb_A* 1xxc_A
Probab=30.75 E-value=64 Score=22.98 Aligned_cols=57 Identities=16% Similarity=0.205 Sum_probs=40.2
Q ss_pred hCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCCcHHHHHHHHHH
Q 015042 98 AGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAA 170 (414)
Q Consensus 98 aGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs~~~g~~i~~~~ 170 (414)
++|-+|+|..|.. +..++.++.+.+.+++++..+.|++ . .++.+=+...+..+.+..
T Consensus 14 ~~n~vVikT~PG~---A~~va~~iD~~~~~~~I~GTIAGDD-T------------Ilvi~r~~~~a~~l~~~i 70 (78)
T 1xxa_A 14 NDAVVVIHTSPGA---AQLIARLLDSLGKAEGILGTIAGDD-T------------IFTTPANGFTVKDLYEAI 70 (78)
T ss_dssp CSSCEEEEESTTT---HHHHHHHHTTTTTTTTEEEEEECSS-E------------EEEEECTTCCHHHHHHHH
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhcCCCCCeEEEEecCC-E------------EEEEECCHHHHHHHHHHH
Confidence 6899999988654 6778888888778888999998843 1 234444455555565554
No 72
>2p5m_A Arginine repressor; alpha-beta, L-arginine binding domain, DNA binding protein; HET: ARG; 1.95A {Bacillus subtilis} SCOP: d.74.2.1
Probab=30.41 E-value=72 Score=22.99 Aligned_cols=56 Identities=11% Similarity=0.068 Sum_probs=39.0
Q ss_pred hCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCCcHHHHHHHHHH
Q 015042 98 AGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAA 170 (414)
Q Consensus 98 aGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs~~~g~~i~~~~ 170 (414)
++|-+|+|..|.. +..++.++...++|+ ++..+.|++ -.++.+=+...+..+.+..
T Consensus 24 ~~n~vVikT~PG~---A~~vA~~iD~~~~~e-IlGTIAGDD-------------TIlvi~r~~~~a~~l~~~l 79 (83)
T 2p5m_A 24 ASHMIVLKTMPGN---AQAIGALMDNLDWDE-MMGTICGDD-------------TILIICRTPEDTEGVKNRL 79 (83)
T ss_dssp ETTEEEEEESTTC---HHHHHHHHHTTTCTT-CCEEEECSS-------------EEEEECSSHHHHHHHHHHH
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEecCC-------------EEEEEECCHHHHHHHHHHH
Confidence 7999999998755 677889998887775 888888743 1244444555555555543
No 73
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=29.73 E-value=3.2e+02 Score=25.20 Aligned_cols=88 Identities=15% Similarity=0.091 Sum_probs=53.1
Q ss_pred HHHhhhCCCccEEEEeCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceE
Q 015042 142 GAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRV 221 (414)
Q Consensus 142 ~~~l~~~~~v~~v~~tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i 221 (414)
.+.|+.++++|.|++...+..-..+...+. +.+|.+++|-+- ..+++.+-+ ++..+ ..+|. .+
T Consensus 80 ~~~ll~~~~vD~V~I~tp~~~H~~~~~~al-~aGkhVl~EKPl--------a~~~~ea~~-l~~~a-~~~g~------~l 142 (361)
T 3u3x_A 80 AEEILEDENIGLIVSAAVSSERAELAIRAM-QHGKDVLVDKPG--------MTSFDQLAK-LRRVQ-AETGR------IF 142 (361)
T ss_dssp HHHHHTCTTCCEEEECCCHHHHHHHHHHHH-HTTCEEEEESCS--------CSSHHHHHH-HHHHH-HTTCC------CE
T ss_pred HHHHhcCCCCCEEEEeCChHHHHHHHHHHH-HCCCeEEEeCCC--------CCCHHHHHH-HHHHH-HHcCC------EE
Confidence 356667889999999988888777777776 667787776531 124555443 33322 22332 23
Q ss_pred EEe-CchHH-HHHHHHHHHHhhcccCC
Q 015042 222 FVQ-EGIYD-KFEKKLLEKAKAWLVGD 246 (414)
Q Consensus 222 ~V~-~~i~d-~f~~~l~~~~~~~~~g~ 246 (414)
.|. ...++ .....+++.+++=.+|.
T Consensus 143 ~v~~~~R~~~p~~~~~k~~i~~g~iG~ 169 (361)
T 3u3x_A 143 SILYSEHFESPATVKAGELVAAGAIGE 169 (361)
T ss_dssp EEECHHHHTCHHHHHHHHHHHTTTTSS
T ss_pred EEechHhhCCHHHHHHHHHHHcCCCCC
Confidence 443 33354 66777777776534443
No 74
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=28.57 E-value=52 Score=27.71 Aligned_cols=120 Identities=15% Similarity=0.048 Sum_probs=73.5
Q ss_pred eeecC-CceEEEEcCCcc-chHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHH-cCCCCCcEEEEeC-CchhhH
Q 015042 67 TLREP-VGVVGHIIPWNF-PTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKL-AGIPDGVLNVVPG-FGPTAG 142 (414)
Q Consensus 67 ~~~~P-~Gvv~~i~p~n~-P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~-aG~p~g~v~~v~~-~~~~~~ 142 (414)
...-| .|-|+++..-+- +-...+..-...+.+|..++- |.-|+.. |.+ .|+|-..++-++. .++.++
T Consensus 21 ~~~lP~~g~V~lsv~D~dK~~lv~~ak~~~~lL~Gf~L~A-----T~gTa~~----L~e~~Gl~v~~v~k~~eGG~pqI~ 91 (178)
T 1vmd_A 21 KIFMDKKKRIALIAHDRRKRDLLEWVSFNLGTLSKHELYA-----TGTTGAL----LQEKLGLKVHRLKSGPLGGDQQIG 91 (178)
T ss_dssp EEEECSSCEEEEEECGGGHHHHHHHHHHSHHHHTTSEEEE-----CHHHHHH----HHHHHCCCCEECSCGGGTHHHHHH
T ss_pred eeeCCCCCEEEEEEehhhHHHHHHHHHHHHHHhcCCEEEE-----chHHHHH----HHHHhCceeEEEeecCCCCCchHH
Confidence 33444 376665544443 444555566667778988775 4455444 445 7999655543332 133445
Q ss_pred HHhhhCCCccEEEEeCC-------cHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCC
Q 015042 143 AAICSHMDIDYVCFTGS-------TDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKG 212 (414)
Q Consensus 143 ~~l~~~~~v~~v~~tGs-------~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~G 212 (414)
+.+ ..-.||+|+||=+ ...+..|.+.+. ....|+..-+ ..|++++.+.+++..
T Consensus 92 d~I-~~geIdlVInt~dPl~~~~h~~D~~~IRR~A~-~~~IP~~Tnl---------------atA~A~v~ail~~~~ 151 (178)
T 1vmd_A 92 AMI-AEGKIDVLIFFWDPLEPQAHDVDVKALIRIAT-VYNIPVAITR---------------STADFLISSPLMNDV 151 (178)
T ss_dssp HHH-HTTSCCEEEEECCSSSCCTTSCCHHHHHHHHH-HTTCCEESSH---------------HHHHHHHHSGGGGSC
T ss_pred HHH-HCCCccEEEEccCccCCCcccccHHHHHHHHH-HcCCCEEeCH---------------HHHHHHHHHHhcccc
Confidence 555 5567999999876 235678888887 6666755322 457778888877764
No 75
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=27.06 E-value=33 Score=28.44 Aligned_cols=52 Identities=21% Similarity=0.191 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhh---CCCccEEEEeCCcHHH
Q 015042 112 LTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICS---HMDIDYVCFTGSTDVG 163 (414)
Q Consensus 112 ~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~---~~~v~~v~~tGs~~~g 163 (414)
.....+.+.|.+.|+......+++.+...+.+.|.. ..+.|.|+.||+...+
T Consensus 31 sn~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~g 85 (169)
T 1y5e_A 31 KSGQLLHELLKEAGHKVTSYEIVKDDKESIQQAVLAGYHKEDVDVVLTNGGTGIT 85 (169)
T ss_dssp HHHHHHHHHHHHHTCEEEEEEEECSSHHHHHHHHHHHHTCTTCSEEEEECCCSSS
T ss_pred ChHHHHHHHHHHCCCeEeEEEEeCCCHHHHHHHHHHHHhcCCCCEEEEcCCCCCC
Confidence 445667888999998766666776644444444433 1268999999998643
No 76
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=26.72 E-value=37 Score=28.53 Aligned_cols=52 Identities=17% Similarity=0.020 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhh---CCCccEEEEeCCcHHH
Q 015042 112 LTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICS---HMDIDYVCFTGSTDVG 163 (414)
Q Consensus 112 ~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~---~~~v~~v~~tGs~~~g 163 (414)
.....+.+.+++.|...-...+++.+...+.+.|.. ..+.|.|+.||+...+
T Consensus 40 sn~~~L~~~l~~~G~~v~~~~iv~Dd~~~I~~al~~a~~~~~~DlVittGG~s~g 94 (178)
T 2pjk_A 40 ESGDIIKQLLIENGHKIIGYSLVPDDKIKILKAFTDALSIDEVDVIISTGGTGYS 94 (178)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHTCTTCCEEEEESCCSSS
T ss_pred hHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCC
Confidence 455678888999998766666777644445555433 2248999999998643
No 77
>3v4g_A Arginine repressor; vibrio vulnificus CMCP6, virulence, type secretion system, center for structural genomics of infecti diseases, csgid; 1.60A {Vibrio vulnificus} PDB: 1aoy_A
Probab=26.64 E-value=62 Score=27.26 Aligned_cols=39 Identities=21% Similarity=0.327 Sum_probs=32.6
Q ss_pred hhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCc
Q 015042 97 AAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFG 138 (414)
Q Consensus 97 aaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~ 138 (414)
.++|-+|+|..|.. +..++.++...+.|++++..+.|++
T Consensus 115 ~~~nlvVIkT~PG~---A~~vA~~ID~~~~~e~IlGTIAGDD 153 (180)
T 3v4g_A 115 HNQALVVIHTGPGA---AQLIARMLDSLGKSEGILGVVAGDD 153 (180)
T ss_dssp ECSSCEEEEESTTC---HHHHHHHHHHHCGGGTEEEEEECSS
T ss_pred ecCCEEEEEeCCCc---HHHHHHHHHhCCCCCCeEEEEecCC
Confidence 47999999998755 6778888988889998999998843
No 78
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=25.61 E-value=1.7e+02 Score=26.81 Aligned_cols=105 Identities=16% Similarity=0.079 Sum_probs=60.3
Q ss_pred eEEeecCCC---ChHHHHHHHHHHHHcCCCCCcEEEEeCCch-hh---HHHhhhCCCccEEEEeCCcHHHHHHHHHHHh-
Q 015042 101 TMIVKPAEQ---TPLTALYYAHLAKLAGIPDGVLNVVPGFGP-TA---GAAICSHMDIDYVCFTGSTDVGRLVMQAAAA- 172 (414)
Q Consensus 101 ~vv~kps~~---~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~-~~---~~~l~~~~~v~~v~~tGs~~~g~~i~~~~a~- 172 (414)
.+|+.|... +......+.+.|.++|+. +.+...... .. ...+. ..+.|.|+..|++.+-..+......
T Consensus 28 ~vI~NP~sg~~~~~~~~~~i~~~L~~~g~~---~~~~~t~~~~~a~~~~~~~~-~~~~d~vvv~GGDGTv~~v~~~l~~~ 103 (337)
T 2qv7_A 28 RIIYNPTSGKEQFKRELPDALIKLEKAGYE---TSAYATEKIGDATLEAERAM-HENYDVLIAAGGDGTLNEVVNGIAEK 103 (337)
T ss_dssp EEEECTTSTTSCHHHHHHHHHHHHHHTTEE---EEEEECCSTTHHHHHHHHHT-TTTCSEEEEEECHHHHHHHHHHHTTC
T ss_pred EEEECCCCCCCchHHHHHHHHHHHHHcCCe---EEEEEecCcchHHHHHHHHh-hcCCCEEEEEcCchHHHHHHHHHHhC
Confidence 355666653 223445677778888764 333332221 21 12222 2457999999999999998888731
Q ss_pred cccce-eEEEcCCCCCce-Ec-CCCCHHHHHHHHHHHhhc
Q 015042 173 SNLKQ-VSLELGGKSPLL-IF-DDADLDTAADVALLGNLY 209 (414)
Q Consensus 173 ~~~~~-~~~e~gg~~~~i-V~-~dadl~~aa~~i~~~~~~ 209 (414)
....| .++-+|--|-+- .+ -..|++.+++.+..+...
T Consensus 104 ~~~~pl~iIP~GT~N~lAr~Lg~~~~~~~al~~i~~g~~~ 143 (337)
T 2qv7_A 104 PNRPKLGVIPMGTVNDFGRALHIPNDIMGALDVIIEGHST 143 (337)
T ss_dssp SSCCEEEEEECSSCCHHHHHTTCCSSHHHHHHHHHHTCEE
T ss_pred CCCCcEEEecCCcHhHHHHHcCCCCCHHHHHHHHHcCCcE
Confidence 23334 344444444322 11 235899999999887543
No 79
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.96 E-value=28 Score=29.25 Aligned_cols=49 Identities=14% Similarity=0.188 Sum_probs=35.8
Q ss_pred cceecceEEEEeeCCHHHHHHHh----hcCCCCceEEEecCCHHHHHHHHHhc
Q 015042 311 EEIFGPVMALMKFKTVEEAIKSA----NNTQYGLAAGIVTKDLNVANTVSRSI 359 (414)
Q Consensus 311 ~E~fgPvl~v~~~~~~~eai~~~----n~~~~gl~~sv~s~d~~~~~~~~~~l 359 (414)
+|-||+..+..--.+++||++.+ .....-|-.++++..-...+.+.+.+
T Consensus 25 ~~~yg~~~p~F~~gs~~~Al~~A~~~~k~e~K~LlVyLhs~~~~~~~~f~~~~ 77 (178)
T 2ec4_A 25 SSRYGDCHPVFFIGSLEAAFQEAFYVKARDRKLLAIYLHHDESVLTNVFCSQM 77 (178)
T ss_dssp HHHHCSCCCCCCCSCHHHHHHTTTSSCTTTCCEEEEEEECSSCSHHHHHHHHT
T ss_pred HHHhCCCCCCeeeCCHHHHHHHHHhhhhhhCcEEEEEEeCCCCccHHHHHHHh
Confidence 34556655555567899999999 77777799999997766666666554
No 80
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=24.79 E-value=34 Score=28.51 Aligned_cols=50 Identities=22% Similarity=0.171 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhh---CCCccEEEEeCCcHH
Q 015042 113 TALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICS---HMDIDYVCFTGSTDV 162 (414)
Q Consensus 113 ~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~---~~~v~~v~~tGs~~~ 162 (414)
.+..+.+.|.+.|+......+++.+...+.+.+.. ..+.|.|+.||+...
T Consensus 29 n~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~a~~~~~~DlVittGG~g~ 81 (172)
T 1mkz_A 29 SGHYLRDSAQEAGHHVVDKAIVKENRYAIRAQVSAWIASDDVQVVLITGGTGL 81 (172)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHHSSSCCEEEEESCCSS
T ss_pred cHHHHHHHHHHCCCeEeEEEEeCCCHHHHHHHHHHHHhcCCCCEEEeCCCCCC
Confidence 44667888889988655566776644444444432 224799999999864
No 81
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=23.32 E-value=38 Score=28.35 Aligned_cols=50 Identities=18% Similarity=0.011 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhC-CCccEEEEeCCcH
Q 015042 112 LTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSH-MDIDYVCFTGSTD 161 (414)
Q Consensus 112 ~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~-~~v~~v~~tGs~~ 161 (414)
..+..+.+.+.+.|+......+++.+...+.+.+... .+.|.|+.||+..
T Consensus 23 tN~~~l~~~L~~~G~~v~~~~iv~Dd~~~I~~~l~~a~~~~DlVittGG~g 73 (172)
T 3kbq_A 23 TNAAFIGNFLTYHGYQVRRGFVVMDDLDEIGWAFRVALEVSDLVVSSGGLG 73 (172)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHHHCSEEEEESCCS
T ss_pred HHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhcCCEEEEcCCCc
Confidence 4556788889999988776777776444444444321 2368899998876
No 82
>2v9v_A Selenocysteine-specific elongation factor; transcription, protein conformational change, transcription elongation factor SELB; 1.10A {Moorella thermoacetica} SCOP: a.4.5.35 a.4.5.35
Probab=22.89 E-value=80 Score=24.55 Aligned_cols=63 Identities=14% Similarity=0.240 Sum_probs=41.4
Q ss_pred ceEEEeCchHHHHHHHHHHHHhhcccCCCCCCCCccc-------ccCCHHHHHHHHHHHHHHHHcCCEEEeCC
Q 015042 219 SRVFVQEGIYDKFEKKLLEKAKAWLVGDPFDPTVRQG-------PQISERHFDRILSYIEHGKREGATLLTGG 284 (414)
Q Consensus 219 ~~i~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~g-------pl~~~~~~~~~~~~i~~a~~~ga~v~~gg 284 (414)
...+++.+.++++.+.+.+.+..+.--+|+.++.... |-.+... +..+++...++|.-...|+
T Consensus 55 ~~~~~~~~~~~~l~~~l~~~L~~yH~~~P~~~G~~keeLr~~~~~~~~~~~---~~~ll~~l~~~g~l~~~~~ 124 (135)
T 2v9v_A 55 DLYAISTERYQAWWQAVTRALEEFHSRYPLRPGLAREELRSRYFSRLPARV---YQALLEEWSREGRLQLAAN 124 (135)
T ss_dssp EEEEEEHHHHHHHHHHHHHHHHHHHHHCTTSSCEEHHHHHHHHCTTSCHHH---HHHHHHHHHHTTSEEECSS
T ss_pred CeEEecHHHHHHHHHHHHHHHHHHHHhCCCccCCCHHHHHHHhcccCCHHH---HHHHHHHHHHCCCEEecCC
Confidence 3448999999999999999999876666665543221 2223333 3456677777776655554
No 83
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=22.61 E-value=4.6e+02 Score=24.85 Aligned_cols=147 Identities=16% Similarity=0.085 Sum_probs=78.8
Q ss_pred EEEEcCCccchHHHHHhHHHHHhh-CCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccE
Q 015042 75 VGHIIPWNFPTTMFFMKVSPALAA-GCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDY 153 (414)
Q Consensus 75 v~~i~p~n~P~~~~~~~~~~aLaa-GN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~ 153 (414)
|++|+..+.- ...+.+|.. .+.-|.--....+..+..+++.+.+.|+|.. .+..+ +.+..+.|+.++++|.
T Consensus 23 vgiIG~G~~g-----~~h~~~l~~~~~~~lvav~d~~~~~~~~~a~~~~~~g~~~~--~~~~~-~~~~~~~ll~~~~vD~ 94 (444)
T 2ixa_A 23 IAFIAVGLRG-----QTHVENMARRDDVEIVAFADPDPYMVGRAQEILKKNGKKPA--KVFGN-GNDDYKNMLKDKNIDA 94 (444)
T ss_dssp EEEECCSHHH-----HHHHHHHHTCTTEEEEEEECSCHHHHHHHHHHHHHTTCCCC--EEECS-STTTHHHHTTCTTCCE
T ss_pred EEEEecCHHH-----HHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHHHhcCCCCC--ceecc-CCCCHHHHhcCCCCCE
Confidence 4555554331 123455543 3443433444556666667766666677632 23332 1123466777788999
Q ss_pred EEEeCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEE-eCchHHHHH
Q 015042 154 VCFTGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFV-QEGIYDKFE 232 (414)
Q Consensus 154 v~~tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V-~~~i~d~f~ 232 (414)
|+++-....-..+...+. +.+|.+++|- |+ ..+++.+.+ ++..+ ...|.. +.| +...++...
T Consensus 95 V~i~tp~~~h~~~~~~al-~aGkhV~~EK----P~----a~~~~ea~~-l~~~a-~~~g~~------~~v~~~~r~~p~~ 157 (444)
T 2ixa_A 95 VFVSSPWEWHHEHGVAAM-KAGKIVGMEV----SG----AITLEECWD-YVKVS-EQTGVP------LMALENVCYRRDV 157 (444)
T ss_dssp EEECCCGGGHHHHHHHHH-HTTCEEEECC----CC----CSSHHHHHH-HHHHH-HHHCCC------EEECCGGGGCHHH
T ss_pred EEEcCCcHHHHHHHHHHH-HCCCeEEEeC----CC----cCCHHHHHH-HHHHH-HHhCCe------EEEEeccccCHHH
Confidence 999888887777777666 6677777773 22 124555433 32222 122322 233 333455666
Q ss_pred HHHHHHHhhcccCC
Q 015042 233 KKLLEKAKAWLVGD 246 (414)
Q Consensus 233 ~~l~~~~~~~~~g~ 246 (414)
..+++.+++=.+|.
T Consensus 158 ~~~~~~i~~G~iG~ 171 (444)
T 2ixa_A 158 MAILNMVRKGMFGE 171 (444)
T ss_dssp HHHHHHHHTTTTCS
T ss_pred HHHHHHHHcCCCCC
Confidence 66777666433443
No 84
>2l69_A Rossmann 2X3 fold protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=21.33 E-value=1.7e+02 Score=21.51 Aligned_cols=43 Identities=21% Similarity=0.223 Sum_probs=32.2
Q ss_pred EEEeeCC---HHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcce
Q 015042 319 ALMKFKT---VEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRA 361 (414)
Q Consensus 319 ~v~~~~~---~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~ 361 (414)
.++.++| .+.||.++...+...-.-||.+|..+.+++.+.++-
T Consensus 54 vvvvvddkewaekairfvkslgaqvliiiydqdqnrleefsrevrr 99 (134)
T 2l69_A 54 VVVVVDDKEWAEKAIRFVKSLGAQVLIIIYDQDQNRLEEFSREVRR 99 (134)
T ss_dssp EEEECSSHHHHHHHHHHHHHHCCCCEEEEECSCHHHHHHHHHHHHH
T ss_pred EEEEEccHHHHHHHHHHHHhcCCeEEEEEEeCchhHHHHHHHHHHh
Confidence 3445555 456788888877777778888999999888887753
No 85
>1b4a_A Arginine repressor; helix turn helix; 2.50A {Geobacillus stearothermophilus} SCOP: a.4.5.3 d.74.2.1 PDB: 1f9n_A
Probab=21.19 E-value=1.4e+02 Score=24.24 Aligned_cols=56 Identities=9% Similarity=0.102 Sum_probs=39.6
Q ss_pred hCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCCcHHHHHHHHHH
Q 015042 98 AGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAA 170 (414)
Q Consensus 98 aGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs~~~g~~i~~~~ 170 (414)
++|-+|+|..|.. +..++.++...++|+ ++..+.|++ -.++.+=+...+..+.+..
T Consensus 90 ~~n~vVikT~PG~---A~~va~~iD~~~~~e-IlGTIAGDD-------------TIlvi~r~~~~a~~l~~~l 145 (149)
T 1b4a_A 90 TGNLLVLRTLPGN---AHAIGVLLDNLDWDE-IVGTICGDD-------------TCLIICRTPKDAKKVSNQL 145 (149)
T ss_dssp ETTEEEEEESTTC---HHHHHHHHHHHTCTT-EEEEEECSS-------------EEEEEESSHHHHHHHHHHH
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEecCC-------------EEEEEeCCHHHHHHHHHHH
Confidence 6999999998755 677888998887775 888888843 1344455555566555543
No 86
>2pbq_A Molybdenum cofactor biosynthesis MOG; molybdopterin, MPT, structural genomics, NPPSFA, national PR protein structural and functional analyses; 1.70A {Aquifex aeolicus} PDB: 2qq1_A 3mci_A 3mcj_A 3k6a_A* 2f7w_A 2f7y_A 2fuw_A
Probab=20.98 E-value=49 Score=27.66 Aligned_cols=50 Identities=12% Similarity=0.088 Sum_probs=32.5
Q ss_pred HHHHHHHHHHH---HcCCCCCcEEEEeCCchhhHHHhhhC---CCccEEEEeCCcHH
Q 015042 112 LTALYYAHLAK---LAGIPDGVLNVVPGFGPTAGAAICSH---MDIDYVCFTGSTDV 162 (414)
Q Consensus 112 ~~~~~l~~~l~---~aG~p~g~v~~v~~~~~~~~~~l~~~---~~v~~v~~tGs~~~ 162 (414)
..+..+.+.++ +.|+.. ...+++.+...+.+.|... .+.|.|+.||+...
T Consensus 25 sn~~~l~~~l~~l~~~G~~v-~~~iv~Dd~~~I~~~l~~~~~~~~~DlVittGG~g~ 80 (178)
T 2pbq_A 25 ISGKAIIDYLKDVIITPFEV-EYRVIPDERDLIEKTLIELADEKGCSLILTTGGTGP 80 (178)
T ss_dssp HHHHHHHHHHHHHBCSCCEE-EEEEECSCHHHHHHHHHHHHHTSCCSEEEEESCCSS
T ss_pred chHHHHHHHHHHHHhCCCEE-EEEEcCCCHHHHHHHHHHHHhcCCCCEEEECCCCCC
Confidence 34466777777 788866 5667766444444444332 25799999999864
No 87
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=20.09 E-value=5.2e+02 Score=23.83 Aligned_cols=86 Identities=10% Similarity=-0.037 Sum_probs=52.5
Q ss_pred hhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEe-CC-------chhhHHHhhhCCCccEEEEe---CCcHHHHH
Q 015042 97 AAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVP-GF-------GPTAGAAICSHMDIDYVCFT---GSTDVGRL 165 (414)
Q Consensus 97 aaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~-~~-------~~~~~~~l~~~~~v~~v~~t---Gs~~~g~~ 165 (414)
..|+.-++.=|- ..+..+...+.+.|+. .=.++. |. -.+..+.|..+|+.+.|... |+... ++
T Consensus 167 ~~G~vgivSqSG---~l~~~i~~~~~~~g~G--~S~~VsiGn~~~~d~~~~D~l~~~~~Dp~T~~I~l~gEi~g~~e-~~ 240 (334)
T 3mwd_B 167 RPGSVAYVSRSG---GMSNELNNIISRTTDG--VYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEE-YK 240 (334)
T ss_dssp SCCSEEEEESCH---HHHHHHHHHHHHHSSC--EEEEEECCSSSSCSSCHHHHHHHHHTCTTCCEEEEEEESSSSHH-HH
T ss_pred CCCCEEEEeCch---HHHHHHHHHHHhcCCC--eEEEEECCCCccCCCCHHHHHHHHhcCCCCCEEEEEEecCChHH-HH
Confidence 457777775443 3334455556666664 223333 21 12356788999999998874 66655 55
Q ss_pred HHHHHHh-cccceeEEEcCCCCCc
Q 015042 166 VMQAAAA-SNLKQVSLELGGKSPL 188 (414)
Q Consensus 166 i~~~~a~-~~~~~~~~e~gg~~~~ 188 (414)
..+.+.. ...||++.--.|++..
T Consensus 241 ~~~~~r~~~~~KPVV~~kaGrs~~ 264 (334)
T 3mwd_B 241 ICRGIKEGRLTKPIVCWCIGTCAT 264 (334)
T ss_dssp HHHHHHTTSCCSCEEEEEECTTCC
T ss_pred HHHHHHhhcCCCCEEEEEcCCCcc
Confidence 5555432 3568988888887754
Done!