Query 015044
Match_columns 414
No_of_seqs 324 out of 2428
Neff 4.2
Searched_HMMs 29240
Date Mon Mar 25 05:40:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015044.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015044hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2fgc_A Acetolactate synthase, 100.0 7E-42 2.4E-46 317.5 15.7 134 77-211 27-188 (193)
2 2pc6_A Probable acetolactate s 100.0 3E-41 1E-45 306.2 13.9 134 77-210 2-161 (165)
3 3lp6_A Phosphoribosylaminoimid 100.0 2.9E-42 9.8E-47 315.2 6.1 129 279-410 7-144 (174)
4 3ors_A N5-carboxyaminoimidazol 100.0 4.4E-42 1.5E-46 311.3 6.3 128 280-410 4-142 (163)
5 3trh_A Phosphoribosylaminoimid 100.0 8.9E-42 3E-46 310.8 7.9 128 280-410 7-145 (169)
6 1xmp_A PURE, phosphoribosylami 100.0 6.1E-42 2.1E-46 311.9 6.6 129 279-410 11-150 (170)
7 3oow_A Phosphoribosylaminoimid 100.0 1.5E-41 5.1E-46 308.5 7.0 129 279-410 5-144 (166)
8 1o4v_A Phosphoribosylaminoimid 100.0 1.4E-41 4.9E-46 312.6 6.1 128 280-410 14-150 (183)
9 3kuu_A Phosphoribosylaminoimid 100.0 2E-41 7E-46 309.5 7.0 129 279-410 12-151 (174)
10 4b4k_A N5-carboxyaminoimidazol 100.0 2.5E-41 8.5E-46 310.2 7.6 131 277-410 20-161 (181)
11 4grd_A N5-CAIR mutase, phospho 100.0 2.1E-41 7.1E-46 309.1 6.7 130 277-409 10-150 (173)
12 2f1f_A Acetolactate synthase i 100.0 5.8E-40 2E-44 297.3 15.3 133 78-210 2-161 (164)
13 1u11_A PURE (N5-carboxyaminoim 100.0 2.2E-41 7.6E-46 311.1 6.1 132 276-410 18-160 (182)
14 3rg8_A Phosphoribosylaminoimid 100.0 9.8E-40 3.4E-44 295.1 7.3 125 280-410 3-137 (159)
15 2ywx_A Phosphoribosylaminoimid 100.0 9.4E-40 3.2E-44 294.6 7.1 126 281-410 1-132 (157)
16 2h31_A Multifunctional protein 100.0 1.1E-34 3.6E-39 295.7 8.0 126 279-410 265-400 (425)
17 2f06_A Conserved hypothetical 98.8 2.6E-08 8.9E-13 85.5 11.0 95 78-196 5-101 (144)
18 2ko1_A CTR148A, GTP pyrophosph 98.7 7.2E-08 2.4E-12 75.0 10.2 73 81-153 8-81 (88)
19 1u8s_A Glycine cleavage system 98.6 2.8E-07 9.7E-12 82.7 11.7 107 81-194 9-119 (192)
20 1zpv_A ACT domain protein; str 98.4 1.9E-07 6.4E-12 73.8 4.6 67 78-144 4-72 (91)
21 1y7p_A Hypothetical protein AF 97.7 0.00012 4E-09 69.6 9.1 76 81-159 7-88 (223)
22 2re1_A Aspartokinase, alpha an 97.5 0.00031 1.1E-08 62.0 8.3 110 79-201 26-140 (167)
23 1sc6_A PGDH, D-3-phosphoglycer 97.3 0.00091 3.1E-08 67.6 10.2 71 80-150 333-403 (404)
24 2jhe_A Transcription regulator 97.3 0.0014 4.8E-08 55.8 9.8 103 80-206 2-105 (190)
25 1u8s_A Glycine cleavage system 97.0 0.0015 5.1E-08 58.4 8.0 62 81-142 96-166 (192)
26 3k5p_A D-3-phosphoglycerate de 97.0 0.004 1.4E-07 63.5 11.8 72 79-150 344-415 (416)
27 2nyi_A Unknown protein; protei 96.7 0.0056 1.9E-07 55.4 9.0 72 81-153 96-178 (195)
28 2dt9_A Aspartokinase; protein- 96.5 0.0097 3.3E-07 52.3 9.0 101 81-194 19-124 (167)
29 3o1l_A Formyltetrahydrofolate 96.5 0.0062 2.1E-07 59.7 8.1 98 78-190 20-127 (302)
30 3lou_A Formyltetrahydrofolate 96.4 0.0052 1.8E-07 59.9 7.2 99 78-191 8-118 (292)
31 2f06_A Conserved hypothetical 96.4 0.006 2E-07 51.9 6.6 33 81-113 75-107 (144)
32 3n0v_A Formyltetrahydrofolate 96.4 0.0064 2.2E-07 59.0 7.4 96 81-191 11-113 (286)
33 1ygy_A PGDH, D-3-phosphoglycer 96.3 0.0052 1.8E-07 63.7 6.8 68 81-150 457-526 (529)
34 2nyi_A Unknown protein; protei 96.3 0.0086 2.9E-07 54.1 7.3 110 81-200 8-127 (195)
35 3mtj_A Homoserine dehydrogenas 96.3 0.0081 2.8E-07 61.7 8.0 64 81-144 362-429 (444)
36 3obi_A Formyltetrahydrofolate 96.3 0.0077 2.6E-07 58.5 7.3 97 81-192 9-113 (288)
37 3nrb_A Formyltetrahydrofolate 96.2 0.0083 2.8E-07 58.3 7.0 96 81-191 10-111 (287)
38 3s1t_A Aspartokinase; ACT doma 96.2 0.022 7.5E-07 51.4 9.3 105 84-203 23-135 (181)
39 2dtj_A Aspartokinase; protein- 96.1 0.019 6.4E-07 51.3 8.4 107 81-198 18-129 (178)
40 2qmx_A Prephenate dehydratase; 95.1 0.09 3.1E-06 51.1 9.9 67 81-147 203-274 (283)
41 3ab4_A Aspartokinase; aspartat 95.1 0.13 4.3E-06 51.8 11.0 102 81-194 267-373 (421)
42 3mah_A Aspartokinase; aspartat 94.7 0.066 2.3E-06 46.6 6.9 98 81-198 21-121 (157)
43 3p96_A Phosphoserine phosphata 94.3 0.083 2.8E-06 51.9 7.3 102 81-194 15-128 (415)
44 2qmw_A PDT, prephenate dehydra 94.1 0.12 4.2E-06 49.8 7.8 67 81-147 189-262 (267)
45 3mwb_A Prephenate dehydratase; 93.3 0.2 6.8E-06 49.4 7.9 69 81-149 204-281 (313)
46 4go7_X Aspartokinase; transfer 93.2 0.16 5.4E-06 47.0 6.8 108 81-202 38-153 (200)
47 3luy_A Probable chorismate mut 92.0 0.53 1.8E-05 46.7 9.1 67 81-147 209-282 (329)
48 1phz_A Protein (phenylalanine 90.6 0.32 1.1E-05 50.1 6.0 69 81-149 37-110 (429)
49 3c1m_A Probable aspartokinase; 89.9 1.3 4.6E-05 45.2 10.0 100 81-194 321-433 (473)
50 3tvi_A Aspartokinase; structur 88.7 1.2 4.3E-05 45.5 8.7 98 86-199 309-409 (446)
51 2dtj_A Aspartokinase; protein- 88.5 0.94 3.2E-05 40.2 6.8 53 81-139 98-153 (178)
52 2nzc_A Hypothetical protein; s 88.3 1.8 6.3E-05 35.4 7.8 66 81-146 10-77 (86)
53 2dt9_A Aspartokinase; protein- 87.4 1.8 6E-05 37.8 7.7 43 81-127 98-143 (167)
54 3l76_A Aspartokinase; alloster 86.9 2.1 7E-05 45.3 9.3 98 85-194 278-384 (600)
55 2re1_A Aspartokinase, alpha an 86.2 1.4 4.6E-05 38.6 6.4 42 81-126 106-150 (167)
56 3p96_A Phosphoserine phosphata 85.5 2 6.9E-05 42.0 7.8 60 81-141 104-165 (415)
57 1jq5_A Glycerol dehydrogenase; 85.4 0.44 1.5E-05 46.6 3.1 82 280-363 32-120 (370)
58 3uhj_A Probable glycerol dehyd 83.1 0.53 1.8E-05 47.1 2.6 81 280-363 53-140 (387)
59 3l76_A Aspartokinase; alloster 83.0 4.4 0.00015 42.8 9.7 110 84-205 451-568 (600)
60 3bfj_A 1,3-propanediol oxidore 82.5 0.74 2.5E-05 45.3 3.3 81 281-363 35-144 (387)
61 3okf_A 3-dehydroquinate syntha 82.1 0.83 2.8E-05 46.1 3.6 81 280-362 63-158 (390)
62 3s1t_A Aspartokinase; ACT doma 80.6 3.5 0.00012 36.9 6.8 53 81-137 99-156 (181)
63 2rjz_A PILO protein; structura 79.8 3.2 0.00011 36.3 6.1 66 87-152 43-113 (147)
64 1o2d_A Alcohol dehydrogenase, 76.6 1.2 4.2E-05 43.7 2.7 83 280-364 41-151 (371)
65 3ox4_A Alcohol dehydrogenase 2 75.8 0.69 2.4E-05 45.9 0.7 81 281-363 33-140 (383)
66 1rrm_A Lactaldehyde reductase; 75.7 0.79 2.7E-05 45.0 1.1 81 281-363 33-142 (386)
67 2cdq_A Aspartokinase; aspartat 74.8 9.8 0.00034 39.5 9.0 99 81-199 344-454 (510)
68 3ce9_A Glycerol dehydrogenase; 73.9 0.91 3.1E-05 44.1 1.0 81 281-364 36-123 (354)
69 1vlj_A NADH-dependent butanol 73.9 2.3 7.7E-05 42.4 3.8 82 280-363 44-153 (407)
70 4go7_X Aspartokinase; transfer 73.6 4.9 0.00017 37.0 5.7 49 85-139 125-173 (200)
71 1t4a_A PURS; tetramer, complex 72.7 6.9 0.00024 31.1 5.7 56 78-138 1-65 (84)
72 1vq3_A Phosphoribosylformylgly 71.2 19 0.00066 29.6 8.2 57 77-138 14-80 (94)
73 1gtd_A MTH169; synthetase, FGA 70.0 7.1 0.00024 31.1 5.3 55 79-138 3-66 (85)
74 1q5y_A NIKR, nickel responsive 67.5 32 0.0011 27.2 8.6 69 81-149 8-78 (85)
75 2gru_A 2-deoxy-scyllo-inosose 66.3 4.7 0.00016 39.6 4.2 80 280-362 35-129 (368)
76 2wvf_A Hpnikr, putative nickel 65.3 32 0.0011 30.1 8.9 70 81-150 68-139 (148)
77 3ab4_A Aspartokinase; aspartat 64.5 11 0.00039 37.6 6.7 43 81-127 347-392 (421)
78 1rwu_A Hypothetical UPF0250 pr 64.4 47 0.0016 27.9 9.4 64 81-147 39-108 (109)
79 1ta9_A Glycerol dehydrogenase; 63.8 1.7 5.9E-05 44.3 0.5 80 281-363 93-179 (450)
80 2hza_A Nickel-responsive regul 63.7 40 0.0014 28.6 9.1 69 81-149 56-126 (133)
81 1sg6_A Pentafunctional AROM po 63.6 2.5 8.7E-05 41.9 1.7 80 281-362 38-140 (393)
82 3tvi_A Aspartokinase; structur 62.9 11 0.00037 38.6 6.2 44 81-126 377-423 (446)
83 1mjh_A Protein (ATP-binding do 62.9 26 0.00089 28.6 7.6 47 295-342 85-133 (162)
84 1oj7_A Hypothetical oxidoreduc 62.3 3.6 0.00012 40.9 2.5 64 280-345 51-122 (408)
85 2dgb_A Hypothetical protein PU 61.8 15 0.0005 29.2 5.6 45 78-127 3-51 (84)
86 3hl0_A Maleylacetate reductase 61.0 2.1 7.2E-05 42.1 0.6 79 281-363 36-121 (353)
87 3mgj_A Uncharacterized protein 60.2 15 0.00053 31.6 5.8 53 89-141 15-71 (118)
88 2yx5_A UPF0062 protein MJ1593; 60.1 8.5 0.00029 30.5 3.9 45 78-127 1-50 (83)
89 2zw2_A Putative uncharacterize 60.0 12 0.00043 30.3 5.0 54 80-138 7-70 (92)
90 2j0w_A Lysine-sensitive aspart 59.9 13 0.00044 37.9 6.2 93 87-198 320-419 (449)
91 3qbe_A 3-dehydroquinate syntha 59.4 4.1 0.00014 40.7 2.3 80 280-362 44-138 (368)
92 1vr9_A CBS domain protein/ACT 59.2 1.6 5.6E-05 38.8 -0.5 90 48-139 98-198 (213)
93 2lqj_A Mg2+ transport protein; 58.7 24 0.00084 28.7 6.5 68 81-149 13-85 (94)
94 2bj7_A Nickel responsive regul 56.4 68 0.0023 27.4 9.3 69 81-149 58-128 (138)
95 3jzd_A Iron-containing alcohol 54.2 2.7 9.1E-05 41.5 -0.0 79 281-363 38-123 (358)
96 3s3t_A Nucleotide-binding prot 51.9 30 0.001 27.5 6.1 47 295-342 71-121 (146)
97 3c1m_A Probable aspartokinase; 51.3 12 0.0004 38.2 4.2 45 81-127 407-454 (473)
98 1xah_A Sadhqs, 3-dehydroquinat 49.8 3.4 0.00012 40.3 -0.1 80 280-363 32-126 (354)
99 3mah_A Aspartokinase; aspartat 48.5 13 0.00045 31.9 3.5 38 85-126 98-135 (157)
100 3dlo_A Universal stress protei 47.8 44 0.0015 27.7 6.6 50 293-342 78-130 (155)
101 4eg0_A D-alanine--D-alanine li 46.4 23 0.00077 33.1 5.1 76 280-361 14-94 (317)
102 2gm3_A Unknown protein; AT3G01 45.1 46 0.0016 27.6 6.4 48 294-342 88-137 (175)
103 1tdj_A Biosynthetic threonine 43.3 50 0.0017 34.4 7.5 109 81-194 341-460 (514)
104 2obx_A DMRL synthase 1, 6,7-di 43.1 51 0.0018 29.4 6.6 66 280-355 12-86 (157)
105 3hgm_A Universal stress protei 43.1 52 0.0018 26.1 6.1 50 293-343 70-124 (147)
106 1ujn_A Dehydroquinate synthase 41.6 7.7 0.00026 37.9 1.0 78 280-362 29-119 (348)
107 3idf_A USP-like protein; unive 41.5 1.2E+02 0.004 23.8 8.0 51 294-350 67-119 (138)
108 2cz4_A Hypothetical protein TT 40.8 1.1E+02 0.0037 25.7 8.0 72 76-153 23-116 (119)
109 2h9z_A Hypothetical protein HP 40.6 43 0.0015 26.7 5.1 64 81-147 18-85 (86)
110 2dum_A Hypothetical protein PH 38.5 84 0.0029 25.8 6.9 49 294-342 79-130 (170)
111 2cvi_A 75AA long hypothetical 38.4 1.2E+02 0.0043 22.7 7.7 67 120-202 6-73 (83)
112 1ejb_A Lumazine synthase; anal 38.4 24 0.00081 31.9 3.6 112 280-405 17-164 (168)
113 3mt0_A Uncharacterized protein 37.9 2.3E+02 0.0077 25.5 11.7 54 289-342 47-102 (290)
114 3fg9_A Protein of universal st 37.8 69 0.0024 25.9 6.2 50 294-343 80-133 (156)
115 3olq_A Universal stress protei 37.3 2.3E+02 0.008 25.5 11.0 47 296-342 76-124 (319)
116 3clh_A 3-dehydroquinate syntha 36.8 2.2 7.4E-05 41.7 -3.7 81 280-362 27-120 (343)
117 3nq4_A 6,7-dimethyl-8-ribityll 36.2 1.2E+02 0.0041 27.0 7.8 109 280-404 13-151 (156)
118 2cdq_A Aspartokinase; aspartat 35.7 32 0.0011 35.7 4.7 56 81-138 423-482 (510)
119 3dhx_A Methionine import ATP-b 35.6 90 0.0031 25.3 6.5 62 81-143 26-90 (106)
120 4h1h_A LMO1638 protein; MCCF-l 35.0 55 0.0019 31.7 5.9 67 276-343 9-91 (327)
121 1rvv_A Riboflavin synthase; tr 34.2 91 0.0031 27.7 6.7 109 280-404 13-150 (154)
122 2i0f_A 6,7-dimethyl-8-ribityll 34.2 95 0.0033 27.6 6.8 109 280-404 13-152 (157)
123 1di0_A Lumazine synthase; tran 33.1 71 0.0024 28.5 5.9 66 280-355 11-85 (158)
124 1tq8_A Hypothetical protein RV 32.7 1.1E+02 0.0036 25.5 6.7 49 293-342 81-132 (163)
125 2b99_A Riboflavin synthase; lu 32.0 48 0.0016 29.7 4.5 104 281-403 4-132 (156)
126 1hqk_A 6,7-dimethyl-8-ribityll 31.8 88 0.003 27.7 6.2 108 280-404 13-150 (154)
127 2q5c_A NTRC family transcripti 31.3 18 0.0006 32.6 1.6 110 281-404 6-119 (196)
128 2z08_A Universal stress protei 30.3 1.5E+02 0.0051 23.3 6.9 37 305-342 73-112 (137)
129 2zbc_A 83AA long hypothetical 29.4 1.7E+02 0.0058 21.5 8.4 65 120-200 6-71 (83)
130 3sr3_A Microcin immunity prote 28.6 79 0.0027 30.8 5.9 67 276-343 10-92 (336)
131 3iv7_A Alcohol dehydrogenase I 28.1 10 0.00035 37.4 -0.6 76 281-363 39-122 (364)
132 1c2y_A Protein (lumazine synth 27.7 1.2E+02 0.0042 26.9 6.4 66 280-355 14-87 (156)
133 3iwt_A 178AA long hypothetical 27.6 1.4E+02 0.0046 25.8 6.7 65 279-345 15-96 (178)
134 3lft_A Uncharacterized protein 27.0 55 0.0019 29.6 4.1 115 278-407 132-257 (295)
135 4e5s_A MCCFLIKE protein (BA_56 26.8 93 0.0032 30.3 6.0 66 276-342 9-90 (331)
136 3fdx_A Putative filament prote 25.6 1.6E+02 0.0055 23.1 6.3 45 295-339 68-116 (143)
137 2djw_A Probable transcriptiona 25.5 1.4E+02 0.0047 22.8 5.7 65 120-200 6-71 (92)
138 3loq_A Universal stress protei 25.4 2.6E+02 0.0088 25.1 8.4 51 291-342 212-264 (294)
139 1x60_A Sporulation-specific N- 24.5 2E+02 0.0069 21.3 6.3 57 279-335 7-76 (79)
140 3i42_A Response regulator rece 23.9 1.3E+02 0.0044 22.8 5.3 28 82-109 6-33 (127)
141 3la8_A SMU.1229, putative puri 23.3 2.5E+02 0.0087 27.3 8.3 53 286-344 188-247 (303)
142 1kz1_A 6,7-dimethyl-8-ribityll 23.2 1.6E+02 0.0054 26.3 6.3 66 280-355 18-93 (159)
143 3cis_A Uncharacterized protein 23.2 4.2E+02 0.014 23.9 10.1 46 294-342 83-135 (309)
144 3tla_A MCCF; serine protease, 21.6 1.2E+02 0.004 30.2 5.6 67 276-343 40-122 (371)
145 3ab8_A Putative uncharacterize 21.5 2.7E+02 0.0092 24.4 7.6 45 295-341 76-121 (268)
146 1zl0_A Hypothetical protein PA 21.4 1.5E+02 0.0053 28.6 6.3 63 280-343 18-93 (311)
147 2jsx_A Protein NAPD; TAT, proo 21.3 3.2E+02 0.011 22.0 8.3 65 81-149 8-74 (95)
148 2pju_A Propionate catabolism o 21.2 78 0.0027 29.3 4.0 111 281-404 14-131 (225)
149 4eys_A MCCC family protein; MC 21.2 90 0.0031 30.5 4.6 62 281-343 7-86 (346)
150 4dad_A Putative pilus assembly 20.7 2.9E+02 0.0099 21.4 6.9 30 82-111 23-53 (146)
151 3rf7_A Iron-containing alcohol 20.5 27 0.00092 34.7 0.7 78 281-363 55-161 (375)
No 1
>2fgc_A Acetolactate synthase, small subunit; regulatory subunit, structural genomi protein structure initiative; 2.30A {Thermotoga maritima} SCOP: d.58.18.6 d.58.18.6
Probab=100.00 E-value=7e-42 Score=317.48 Aligned_cols=134 Identities=37% Similarity=0.543 Sum_probs=128.4
Q ss_pred cccE-EEEEEeCchhHHHHHHHHHhccCcceeeEEeeecCCCcE--EEEEEeCchhHHHHHHHHHhcCccEEEEEecCC-
Q 015044 77 ELRR-ISVFVRDESGVVDLIDEVFARRGYNIESLAVSGNKDKGL--FTIVVSGTDRVLQQVIEQLQKLVNVLKVEDFSN- 152 (414)
Q Consensus 77 ~Mkr-LSVlVeN~pGVLsRItgLFsRRGyNIeSLtVg~Ted~~i--iTIVV~gde~~veQl~kQL~KLidVikV~dlt~- 152 (414)
.|+| |+++++|+||+|+||+++|+||||||+||++++++++++ |||+|+++++.++||.+||+||+||++|.++++
T Consensus 27 ~m~~~LsVlVeN~pGvLaRItglfsrRG~NI~SLtV~~ted~gisRitIvV~g~e~~ieqL~kQL~KLidVikV~dl~~~ 106 (193)
T 2fgc_A 27 IREHLVSMLVHNKPGVMRKVANLFARRGFNISSITVGESETPGLSRLVIMVKGDDKTIEQIEKQAYKLVEVVKVTPIDPL 106 (193)
T ss_dssp CEEEEEEEEEECCTTHHHHHHHHHHTTTCEEEEEEEEECSSTTEEEEEEEEEECTTHHHHHHHHHTTSTTEEEEEECCSS
T ss_pred ceEEEEEEEECCCChHHHHHHHHHHHCCceEEEEEeeccCCCCEEEEEEEEECCHHHHHHHHHHhcCcCceEEEEEecCC
Confidence 5888 999999999999999999999999999999999999986 888999999999999999999999999999999
Q ss_pred -chhhheeeeEEEEecCccccc-----------------------cccCCHHHHHHHHHhhccCCcEEEecccceeeecc
Q 015044 153 -EPVIERELMLIKVNADPKFCA-----------------------EVSGDPGKVAAVQRNSSTVGILEIARTGKTAFRRE 208 (414)
Q Consensus 153 -~~~V~REL~LiKV~~~~~~r~-----------------------EvTG~~~KIdafi~~L~~fGIlEiaRTG~iAl~R~ 208 (414)
.+.|+|||+||||+++++ |. |+||+++||++|+++|+||||+|++|||++||.||
T Consensus 107 ~~~~v~REl~LiKV~~~~~-r~ei~~i~~~fra~ivDv~~~s~~iE~tG~~~ki~a~i~~l~~~gi~E~~RtG~val~Rg 185 (193)
T 2fgc_A 107 PENRVEREMALIKVRFDED-KQEIFQLVEIFRGKIIDVSREGAIIEITGARSKVEAFINLLPQKQVEEIARTGIVAMNRW 185 (193)
T ss_dssp GGGEEEEEEEEEEEECSSC-HHHHHHHHHHTTCEEEEECSSEEEEEEEECHHHHHHHHHHSCGGGEEEEEECCCEEEECC
T ss_pred CCccceeEEEEEEEeCCcC-HHHHHHHHHHcCCEEEEEcCCEEEEEEcCCHHHHHHHHHHhhhhCCEEEEccChhheecC
Confidence 999999999999999887 75 99999999999999999999999999999999999
Q ss_pred cCC
Q 015044 209 KLG 211 (414)
Q Consensus 209 ~~~ 211 (414)
+..
T Consensus 186 ~~~ 188 (193)
T 2fgc_A 186 NVK 188 (193)
T ss_dssp CC-
T ss_pred Ccc
Confidence 854
No 2
>2pc6_A Probable acetolactate synthase isozyme III (small; regulatory subunit, structural genomi protein structure initiative; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6
Probab=100.00 E-value=3e-41 Score=306.25 Aligned_cols=134 Identities=40% Similarity=0.614 Sum_probs=128.8
Q ss_pred cccE-EEEEEeCchhHHHHHHHHHhccCcceeeEEeeecCCCcE--EEEEEeCchhHHHHHHHHHhcCccEEEEEecCCc
Q 015044 77 ELRR-ISVFVRDESGVVDLIDEVFARRGYNIESLAVSGNKDKGL--FTIVVSGTDRVLQQVIEQLQKLVNVLKVEDFSNE 153 (414)
Q Consensus 77 ~Mkr-LSVlVeN~pGVLsRItgLFsRRGyNIeSLtVg~Ted~~i--iTIVV~gde~~veQl~kQL~KLidVikV~dlt~~ 153 (414)
.||| |+++++|+||+|+||+++|++|||||+||++++++++++ |||+++++++.++||.+||+||+||++|.++++.
T Consensus 2 ~m~~~IsV~veNrpGvL~rI~~lfs~rg~NI~Sl~v~~t~d~g~sritivV~~d~~~leql~kQL~Kl~dV~~V~~~~~~ 81 (165)
T 2pc6_A 2 HMRHIISLLMENEAGALSRVAGLFSARGYNIESLSVAPTEDPTLSRMTLVTNGPDEIVEQITKQLNKLIEVVKLIDLSSE 81 (165)
T ss_dssp CEEEEEEEEEECSTTHHHHHHHHHHHHTCCCCEEEEEECSSTTEEEEEEEEEECHHHHHHHHHHHHHSTTEEEEEEGGGS
T ss_pred ceEEEEEEEEeCCCcHHHHHHHHHHHCCCcEEEEEEEecCCCCEEEEEEEEeccHHHHHHHHHHhcCCCCEEEEEEcCCc
Confidence 5888 999999999999999999999999999999999999886 8899999999999999999999999999999999
Q ss_pred hhhheeeeEEEEecCccccc-----------------------cccCCHHHHHHHHHhhccCCcEEEecccceeeecccC
Q 015044 154 PVIERELMLIKVNADPKFCA-----------------------EVSGDPGKVAAVQRNSSTVGILEIARTGKTAFRREKL 210 (414)
Q Consensus 154 ~~V~REL~LiKV~~~~~~r~-----------------------EvTG~~~KIdafi~~L~~fGIlEiaRTG~iAl~R~~~ 210 (414)
++|+|||+||||++++++|. |+||+++|+++|+++|+||||+|++|||.+||.||++
T Consensus 82 ~~v~rEl~liKv~~~~~~r~~i~~~~~~fra~ivdv~~~~~~ie~tg~~~ki~~~~~~l~~~gi~e~~RtG~~a~~r~~~ 161 (165)
T 2pc6_A 82 GYVERELMLVKVRAVGKDREEMKRLADIFRGNIIDVTNELYTIELTGTRSKLDGFLQAVDCNLILEIARTGVSGLSRGER 161 (165)
T ss_dssp CEEEEEEEEEEEECCTHHHHHHHHHHHHTTCEEEEEETTEEEEEEEECHHHHHHHHHHSCGGGEEEEEECCCEEEESTTC
T ss_pred ceeeeEEEEEEEeCCcccHHHHHHHHHHcCCEEEEEcCCEEEEEEcCCHHHHHHHHHHhhhcCCEEEEccChhheecCcc
Confidence 99999999999999987765 9999999999999999999999999999999999975
No 3
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=100.00 E-value=2.9e-42 Score=315.22 Aligned_cols=129 Identities=30% Similarity=0.372 Sum_probs=123.3
Q ss_pred CCeEEecccCcCCHHHHHHHHHHHHHcCCcee-eEeecC-ch---HHHHHHHHhCCCeEEEEEeCCCCCCCCcCCccccC
Q 015044 279 RTDVIIVLQHPSDYNVMQDAIAILCENDNICC-QVMKSY-TK---KQLITKLSRSGRKVIIATDHGVGAFLDKIDLLASG 353 (414)
Q Consensus 279 ~~~V~IimGS~SD~~v~~~a~~~L~~~gi~~~-~V~SaH-~p---~~~~~~~~~~g~~ViIavA~G~sa~Lp~~gvvAg~ 353 (414)
.++|+|||||+||+++|+||..+|++||++|+ +|+|+| +| .+|+++++++|++||||+| |++|||| ||+||+
T Consensus 7 ~~~V~IimgS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHR~p~~~~~~~~~a~~~g~~ViIa~A-G~aa~Lp--gvvA~~ 83 (174)
T 3lp6_A 7 RPRVGVIMGSDSDWPVMADAAAALAEFDIPAEVRVVSAHRTPEAMFSYARGAAARGLEVIIAGA-GGAAHLP--GMVAAA 83 (174)
T ss_dssp CCSEEEEESCGGGHHHHHHHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHHHHHTCCEEEEEE-ESSCCHH--HHHHHH
T ss_pred CCeEEEEECcHHhHHHHHHHHHHHHHcCCCEEEEEECCCCCHHHHHHHHHHHHhCCCCEEEEec-CchhhhH--HHHHhc
Confidence 45899999999999999999999999999999 999999 77 7788888889999999999 9999999 999999
Q ss_pred cc--EEEecCcCCCCCCcceee--ccCCCCCeEEEEecCCcchHHHHHHHHHhccCCCccc
Q 015044 354 SP--VIGVPVRASGVTGFPHQF--VEMCPKHAILLVPVNDAKGAARQAMIICDMVHPGGRT 410 (414)
Q Consensus 354 T~--VIgVP~~~~~l~G~daLl--vqMP~GvpVatV~Id~~~nAA~~A~~IL~~~~~~~~~ 410 (414)
|+ |||||++++.++|+|+|| ||||+|+||+||+|||++|||++|+|||+++|++|+.
T Consensus 84 t~~PVIgVP~~~~~l~G~daLlS~vqmp~GvpVatV~I~~~~nAa~lAa~Il~~~d~~l~~ 144 (174)
T 3lp6_A 84 TPLPVIGVPVPLGRLDGLDSLLSIVQMPAGVPVATVSIGGAGNAGLLAVRMLGAANPQLRA 144 (174)
T ss_dssp CSSCEEEEEECCSSGGGHHHHHHHHCCCTTCCCEECCTTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred cCCCEEEeeCCCCCCCCHHHHHHHhhCCCCCeeEEEEcCcchHHHHHHHHHHhCCCHHHHH
Confidence 98 999999998999999999 9999999999999999999999999999999998764
No 4
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=100.00 E-value=4.4e-42 Score=311.32 Aligned_cols=128 Identities=25% Similarity=0.329 Sum_probs=122.0
Q ss_pred CeEEecccCcCCHHHHHHHHHHHHHcCCcee-eEeecC-ch---HHHHHHHHhCCCeEEEEEeCCCCCCCCcCCccccCc
Q 015044 280 TDVIIVLQHPSDYNVMQDAIAILCENDNICC-QVMKSY-TK---KQLITKLSRSGRKVIIATDHGVGAFLDKIDLLASGS 354 (414)
Q Consensus 280 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~~-~V~SaH-~p---~~~~~~~~~~g~~ViIavA~G~sa~Lp~~gvvAg~T 354 (414)
.+|+|||||+||+++|+||..+|++||++|| +|+|+| +| .+|.++++++|++||||+| |++|||| ||+||+|
T Consensus 4 ~~V~Iimgs~SD~~v~~~a~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~a~~~g~~ViIa~A-G~aa~Lp--gvvA~~t 80 (163)
T 3ors_A 4 MKVAVIMGSSSDWKIMQESCNMLDYFEIPYEKQVVSAHRTPKMMVQFASEARERGINIIIAGA-GGAAHLP--GMVASLT 80 (163)
T ss_dssp CCEEEEESCGGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHTTTTTCCEEEEEE-ESSCCHH--HHHHHHC
T ss_pred CeEEEEECcHHHHHHHHHHHHHHHHcCCCEEEEEECCcCCHHHHHHHHHHHHhCCCcEEEEEC-CchhhhH--HHHHhcc
Confidence 5899999999999999999999999999999 999999 77 6677777888999999999 9999999 9999999
Q ss_pred c--EEEecCcCCCCCCcceee--ccCCCCCeEEEEecC--CcchHHHHHHHHHhccCCCccc
Q 015044 355 P--VIGVPVRASGVTGFPHQF--VEMCPKHAILLVPVN--DAKGAARQAMIICDMVHPGGRT 410 (414)
Q Consensus 355 ~--VIgVP~~~~~l~G~daLl--vqMP~GvpVatV~Id--~~~nAA~~A~~IL~~~~~~~~~ 410 (414)
+ |||||++++.++|+|+|| ||||+|+||+||+|| |++|||++|+|||+++|++++.
T Consensus 81 ~~PVIgVP~~~~~l~G~dsLlS~vqmp~GvPVatV~I~~a~~~nAa~lAa~Il~~~d~~l~~ 142 (163)
T 3ors_A 81 TLPVIGVPIETKSLKGIDSLLSIVQMPGGIPVATTAIGAAGAKNAGILAARMLSIQNPSLVE 142 (163)
T ss_dssp SSCEEEEEECCTTTTTHHHHHHHHTCCTTSCCEECCSTHHHHHHHHHHHHHHHHTTCTHHHH
T ss_pred CCCEEEeeCCCCCCCCHHHHHHHhhCCCCCceEEEEcCCcccHHHHHHHHHHHhCCCHHHHH
Confidence 8 999999998999999999 999999999999999 9999999999999999998853
No 5
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=100.00 E-value=8.9e-42 Score=310.75 Aligned_cols=128 Identities=23% Similarity=0.267 Sum_probs=122.4
Q ss_pred CeEEecccCcCCHHHHHHHHHHHHHcCCcee-eEeecC-ch---HHHHHHHHhCCCeEEEEEeCCCCCCCCcCCccccCc
Q 015044 280 TDVIIVLQHPSDYNVMQDAIAILCENDNICC-QVMKSY-TK---KQLITKLSRSGRKVIIATDHGVGAFLDKIDLLASGS 354 (414)
Q Consensus 280 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~~-~V~SaH-~p---~~~~~~~~~~g~~ViIavA~G~sa~Lp~~gvvAg~T 354 (414)
++|+|||||+||+++|+||..+|++||++|+ +|+|+| +| .+|.++++++|++||||+| |++|||| ||+||+|
T Consensus 7 ~~V~IimgS~SD~~v~~~a~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~a~~~g~~ViIa~A-G~aa~Lp--gvvA~~t 83 (169)
T 3trh_A 7 IFVAILMGSDSDLSTMETAFTELKSLGIPFEAHILSAHRTPKETVEFVENADNRGCAVFIAAA-GLAAHLA--GTIAAHT 83 (169)
T ss_dssp CEEEEEESCGGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHHHHTTEEEEEEEE-CSSCCHH--HHHHHTC
T ss_pred CcEEEEECcHHhHHHHHHHHHHHHHcCCCEEEEEEcccCCHHHHHHHHHHHHhCCCcEEEEEC-ChhhhhH--HHHHhcC
Confidence 4899999999999999999999999999999 999999 77 7788888889999999999 9999999 9999999
Q ss_pred c--EEEecCcCCCCCCcceee--ccCCCCCeEEEEecC--CcchHHHHHHHHHhccCCCccc
Q 015044 355 P--VIGVPVRASGVTGFPHQF--VEMCPKHAILLVPVN--DAKGAARQAMIICDMVHPGGRT 410 (414)
Q Consensus 355 ~--VIgVP~~~~~l~G~daLl--vqMP~GvpVatV~Id--~~~nAA~~A~~IL~~~~~~~~~ 410 (414)
+ |||||++++.++|+|+|| ||||+|+||+||+|| |++|||++|+|||+++|++|+.
T Consensus 84 ~~PVIgVP~~~~~l~G~dsLlS~vqmp~GvPVatV~I~~a~~~nAa~lAa~Il~~~d~~l~~ 145 (169)
T 3trh_A 84 LKPVIGVPMAGGSLGGLDALLSTVQMPGGVPVACTAIGKAGAKNAAILAAQIIALQDKSIAQ 145 (169)
T ss_dssp SSCEEEEECCCSTTTTHHHHHHHHCCCTTSCCEECCSTHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred CCCEEEeecCCCCCCCHHHHHHhhcCCCCCceEEEecCCccchHHHHHHHHHHcCCCHHHHH
Confidence 9 999999988999999999 999999999999999 9999999999999999998853
No 6
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=100.00 E-value=6.1e-42 Score=311.93 Aligned_cols=129 Identities=26% Similarity=0.305 Sum_probs=122.2
Q ss_pred CCeEEecccCcCCHHHHHHHHHHHHHcCCcee-eEeecC-ch---HHHHHHHHhCCCeEEEEEeCCCCCCCCcCCccccC
Q 015044 279 RTDVIIVLQHPSDYNVMQDAIAILCENDNICC-QVMKSY-TK---KQLITKLSRSGRKVIIATDHGVGAFLDKIDLLASG 353 (414)
Q Consensus 279 ~~~V~IimGS~SD~~v~~~a~~~L~~~gi~~~-~V~SaH-~p---~~~~~~~~~~g~~ViIavA~G~sa~Lp~~gvvAg~ 353 (414)
.++|+|||||+||+++|+||+.+|++||++|| +|+|+| +| .+|.++++++|++||||+| |++|||| ||+||+
T Consensus 11 ~~~V~IimGS~SD~~v~~~a~~~L~~~Gi~~dv~V~SaHR~p~~l~~~~~~a~~~g~~ViIa~A-G~aa~Lp--gvvA~~ 87 (170)
T 1xmp_A 11 KSLVGVIMGSTSDWETMKYACDILDELNIPYEKKVVSAHRTPDYMFEYAETARERGLKVIIAGA-GGAAHLP--GMVAAK 87 (170)
T ss_dssp CCSEEEEESSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHTTTTTCCEEEEEE-ESSCCHH--HHHHTT
T ss_pred CCcEEEEECcHHHHHHHHHHHHHHHHcCCCEEEEEEeccCCHHHHHHHHHHHHhCCCcEEEEEC-CchhhhH--HHHHhc
Confidence 46899999999999999999999999999999 999999 77 6677777778999999999 9999999 999999
Q ss_pred cc--EEEecCcCCCCCCcceee--ccCCCCCeEEEEecC--CcchHHHHHHHHHhccCCCccc
Q 015044 354 SP--VIGVPVRASGVTGFPHQF--VEMCPKHAILLVPVN--DAKGAARQAMIICDMVHPGGRT 410 (414)
Q Consensus 354 T~--VIgVP~~~~~l~G~daLl--vqMP~GvpVatV~Id--~~~nAA~~A~~IL~~~~~~~~~ 410 (414)
|+ |||||++++.++|+|+|| ||||+|+||+||+|| |++|||++|+|||++.|++++.
T Consensus 88 t~~PVIgVP~~~~~l~G~daLlSivqmP~GvpVatV~I~~a~~~nAallAaqIla~~d~~l~~ 150 (170)
T 1xmp_A 88 TNLPVIGVPVQSKALNGLDSLLSIVQMPGGVPVATVAIGKAGSTNAGLLAAQILGSFHDDIHD 150 (170)
T ss_dssp CCSCEEEEEECCTTTTTHHHHHHHHCCCTTCCCEECCSSHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred cCCCEEEeeCCCCCCCcHHHHHHHhcCCCCCeeEEEecCCcchHHHHHHHHHHHccCCHHHHH
Confidence 99 999999998999999999 999999999999999 9999999999999999998764
No 7
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=100.00 E-value=1.5e-41 Score=308.51 Aligned_cols=129 Identities=26% Similarity=0.271 Sum_probs=121.7
Q ss_pred CCeEEecccCcCCHHHHHHHHHHHHHcCCcee-eEeecC-ch---HHHHHHHHhCCCeEEEEEeCCCCCCCCcCCccccC
Q 015044 279 RTDVIIVLQHPSDYNVMQDAIAILCENDNICC-QVMKSY-TK---KQLITKLSRSGRKVIIATDHGVGAFLDKIDLLASG 353 (414)
Q Consensus 279 ~~~V~IimGS~SD~~v~~~a~~~L~~~gi~~~-~V~SaH-~p---~~~~~~~~~~g~~ViIavA~G~sa~Lp~~gvvAg~ 353 (414)
.++|+|||||+||+++|+||.++|++||++|| +|+|+| +| .+|+++++++|++||||+| |++|||| ||+||+
T Consensus 5 ~p~V~IimgS~SD~~v~~~a~~~l~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~A-G~aa~Lp--gvvA~~ 81 (166)
T 3oow_A 5 SVQVGVIMGSKSDWSTMKECCDILDNLGIGYECEVVSAHRTPDKMFDYAETAKERGLKVIIAGA-GGAAHLP--GMVAAK 81 (166)
T ss_dssp CEEEEEEESSGGGHHHHHHHHHHHHHTTCEEEEEECCTTTCHHHHHHHHHHTTTTTCCEEEEEE-CSSCCHH--HHHHHT
T ss_pred CCeEEEEECcHHhHHHHHHHHHHHHHcCCCEEEEEEcCcCCHHHHHHHHHHHHhCCCcEEEEEC-CcchhhH--HHHHhc
Confidence 35899999999999999999999999999999 999999 77 6677777778999999999 9999999 999999
Q ss_pred cc--EEEecCcCCCCCCcceee--ccCCCCCeEEEEecCC--cchHHHHHHHHHhccCCCccc
Q 015044 354 SP--VIGVPVRASGVTGFPHQF--VEMCPKHAILLVPVND--AKGAARQAMIICDMVHPGGRT 410 (414)
Q Consensus 354 T~--VIgVP~~~~~l~G~daLl--vqMP~GvpVatV~Id~--~~nAA~~A~~IL~~~~~~~~~ 410 (414)
|+ |||||++++.|+|+|+|| ||||+|+||+||+||| ++|||++|+|||+++|++++.
T Consensus 82 t~~PVIgVP~~~~~l~G~dsLlS~vqmp~gvpVatV~I~~ag~~nAa~lAa~Il~~~d~~l~~ 144 (166)
T 3oow_A 82 TTLPVLGVPVKSSTLNGQDSLLSIVQMPAGIPVATFAIGMAGAKNAALFAASILQHTDINIAK 144 (166)
T ss_dssp CSSCEEEEECCCTTTTTHHHHHHHHTCCTTSCCEECCSTHHHHHHHHHHHHHHHGGGCHHHHH
T ss_pred cCCCEEEeecCcCCCCCHHHHHHHhcCCCCCceEEEecCCccchHHHHHHHHHHcCCCHHHHH
Confidence 99 999999999999999999 9999999999999995 999999999999999998853
No 8
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=100.00 E-value=1.4e-41 Score=312.56 Aligned_cols=128 Identities=31% Similarity=0.331 Sum_probs=122.0
Q ss_pred CeEEecccCcCCHHHHHHHHHHHHHcCCcee-eEeecC-ch---HHHHHHHHhCCCeEEEEEeCCCCCCCCcCCccccCc
Q 015044 280 TDVIIVLQHPSDYNVMQDAIAILCENDNICC-QVMKSY-TK---KQLITKLSRSGRKVIIATDHGVGAFLDKIDLLASGS 354 (414)
Q Consensus 280 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~~-~V~SaH-~p---~~~~~~~~~~g~~ViIavA~G~sa~Lp~~gvvAg~T 354 (414)
+.|+|||||+||+++|+||+.+|++||++|+ +|+|+| +| .+|.++++++|++||||+| |++|||| ||+||+|
T Consensus 14 ~~V~IimGS~SD~~v~~~a~~~L~~~Gi~~dv~V~SaHR~p~~l~~~~~~a~~~g~~ViIa~A-G~aa~Lp--gvvA~~t 90 (183)
T 1o4v_A 14 PRVGIIMGSDSDLPVMKQAAEILEEFGIDYEITIVSAHRTPDRMFEYAKNAEERGIEVIIAGA-GGAAHLP--GMVASIT 90 (183)
T ss_dssp CEEEEEESCGGGHHHHHHHHHHHHHTTCEEEEEECCTTTCHHHHHHHHHHTTTTTCCEEEEEE-ESSCCHH--HHHHHHC
T ss_pred CeEEEEeccHHHHHHHHHHHHHHHHcCCCeEEEEEcccCCHHHHHHHHHHHHhCCCcEEEEec-CcccccH--HHHHhcc
Confidence 6899999999999999999999999999999 999999 77 6677777788999999999 9999999 9999999
Q ss_pred c--EEEecCcCCCCCCcceee--ccCCCCCeEEEEecCCcchHHHHHHHHHhccCCCccc
Q 015044 355 P--VIGVPVRASGVTGFPHQF--VEMCPKHAILLVPVNDAKGAARQAMIICDMVHPGGRT 410 (414)
Q Consensus 355 ~--VIgVP~~~~~l~G~daLl--vqMP~GvpVatV~Id~~~nAA~~A~~IL~~~~~~~~~ 410 (414)
+ |||||++++.++|+|+|| ||||+|+||+||+|||++|||++|+|||++.|++|+.
T Consensus 91 ~~PVIgVP~~~~~l~G~dsLlSivqmP~GvpVatV~Id~~~nAa~lAaqIla~~d~~l~~ 150 (183)
T 1o4v_A 91 HLPVIGVPVKTSTLNGLDSLFSIVQMPGGVPVATVAINNAKNAGILAASILGIKYPEIAR 150 (183)
T ss_dssp SSCEEEEEECCTTTTTHHHHHHHHTCCTTCCCEECCTTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred CCCEEEeeCCCCCCCcHHHHHHHhcCCCCCeeEEEecCCchHHHHHHHHHHhcCCHHHHH
Confidence 9 999999999999999999 9999999999999999999999999999999988764
No 9
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=100.00 E-value=2e-41 Score=309.47 Aligned_cols=129 Identities=26% Similarity=0.304 Sum_probs=122.1
Q ss_pred CCeEEecccCcCCHHHHHHHHHHHHHcCCcee-eEeecC-ch---HHHHHHHHhCCCeEEEEEeCCCCCCCCcCCccccC
Q 015044 279 RTDVIIVLQHPSDYNVMQDAIAILCENDNICC-QVMKSY-TK---KQLITKLSRSGRKVIIATDHGVGAFLDKIDLLASG 353 (414)
Q Consensus 279 ~~~V~IimGS~SD~~v~~~a~~~L~~~gi~~~-~V~SaH-~p---~~~~~~~~~~g~~ViIavA~G~sa~Lp~~gvvAg~ 353 (414)
.++|+|||||+||+++|+||..+|++||++|| +|+|+| +| .++.++++++|++||||+| |++|||| ||+||+
T Consensus 12 ~~~V~IimGS~SD~~v~~~a~~~L~~~Gi~~ev~V~SaHR~p~~~~~~~~~a~~~g~~ViIa~A-G~aa~Lp--gvvA~~ 88 (174)
T 3kuu_A 12 GVKIAIVMGSKSDWATMQFAADVLTTLNVPFHVEVVSAHRTPDRLFSFAEQAEANGLHVIIAGN-GGAAHLP--GMLAAK 88 (174)
T ss_dssp CCCEEEEESSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHTTTTTCSEEEEEE-ESSCCHH--HHHHHT
T ss_pred CCcEEEEECcHHHHHHHHHHHHHHHHcCCCEEEEEEcccCCHHHHHHHHHHHHhCCCcEEEEEC-ChhhhhH--HHHHhc
Confidence 35899999999999999999999999999999 999999 77 6677777788999999999 9999999 999999
Q ss_pred cc--EEEecCcCCCCCCcceee--ccCCCCCeEEEEecC--CcchHHHHHHHHHhccCCCccc
Q 015044 354 SP--VIGVPVRASGVTGFPHQF--VEMCPKHAILLVPVN--DAKGAARQAMIICDMVHPGGRT 410 (414)
Q Consensus 354 T~--VIgVP~~~~~l~G~daLl--vqMP~GvpVatV~Id--~~~nAA~~A~~IL~~~~~~~~~ 410 (414)
|+ |||||++++.++|+|+|| ||||+|+||+||+|| |++|||++|+|||+++|++|+.
T Consensus 89 t~~PVIgVP~~~~~l~G~dsLlS~vqmP~GvPVatV~I~~a~~~nAa~lAa~ILa~~d~~l~~ 151 (174)
T 3kuu_A 89 TLVPVLGVPVQSAALSGVDSLYSIVQMPRGIPVGTLAIGKAGAANAALLAAQILALHDTELAG 151 (174)
T ss_dssp CSSCEEEEEECCTTTTTHHHHHHHHTCCTTSCCEECCSSHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred cCCCEEEeeCCCCCCCCHHHHHHhhhCCCCCeeEEEEeCCccchHHHHHHHHHHcCCCHHHHH
Confidence 99 999999998999999999 999999999999999 9999999999999999998853
No 10
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=100.00 E-value=2.5e-41 Score=310.23 Aligned_cols=131 Identities=26% Similarity=0.296 Sum_probs=122.2
Q ss_pred CCCCeEEecccCcCCHHHHHHHHHHHHHcCCcee-eEeecC-ch---HHHHHHHHhCCCeEEEEEeCCCCCCCCcCCccc
Q 015044 277 DPRTDVIIVLQHPSDYNVMQDAIAILCENDNICC-QVMKSY-TK---KQLITKLSRSGRKVIIATDHGVGAFLDKIDLLA 351 (414)
Q Consensus 277 D~~~~V~IimGS~SD~~v~~~a~~~L~~~gi~~~-~V~SaH-~p---~~~~~~~~~~g~~ViIavA~G~sa~Lp~~gvvA 351 (414)
...+.|+|||||+|||++|++|.++|++|||+|| +|+||| +| .+|.+.++++|++||||+| |++|||| ||+|
T Consensus 20 ~mkp~V~IimGS~SD~~v~~~a~~~L~~~gI~~e~~V~SAHRtp~~l~~~~~~a~~~g~~ViIa~A-G~aahLp--GvvA 96 (181)
T 4b4k_A 20 HMKSLVGVIMGSTSDWETMKYACDILDELNIPYEKKVVSAHRTPDYMFEYAETARERGLKVIIAGA-GGAAHLP--GMVA 96 (181)
T ss_dssp --CCSEEEEESSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHTTTTTCCEEEEEE-CSSCCHH--HHHH
T ss_pred CCCccEEEEECCHhHHHHHHHHHHHHHHcCCCeeEEEEccccChHHHHHHHHHHHhcCceEEEEec-cccccch--hhHH
Confidence 3345799999999999999999999999999999 999999 88 6677778889999999999 9999999 9999
Q ss_pred cCcc--EEEecCcCCCCCCcceee--ccCCCCCeEEEEecC--CcchHHHHHHHHHhccCCCccc
Q 015044 352 SGSP--VIGVPVRASGVTGFPHQF--VEMCPKHAILLVPVN--DAKGAARQAMIICDMVHPGGRT 410 (414)
Q Consensus 352 g~T~--VIgVP~~~~~l~G~daLl--vqMP~GvpVatV~Id--~~~nAA~~A~~IL~~~~~~~~~ 410 (414)
|+|+ |||||+.++.++|+|+|| ||||+|+||+||+|| +++|||++|+|||++.|++++.
T Consensus 97 a~T~~PVIGVPv~s~~l~G~DsLlSivQMP~GvpVaTvaig~~ga~NAallA~qILa~~d~~l~~ 161 (181)
T 4b4k_A 97 AKTNLPVIGVPVQSKALNGLDSLLSIVQMPGGVPVATVAIGKAGSTNAGLLAAQILGSFHDDIHD 161 (181)
T ss_dssp TTCCSCEEEEECCCTTTTTHHHHHHHHTCCTTCCCEECCSSHHHHHHHHHHHHHHHTTTCHHHHH
T ss_pred hcCCCCEEEEecCCCCccchhhHHHHHhCCCCCceEEEecCCccHHHHHHHHHHHHccCCHHHHH
Confidence 9999 999999998999999999 999999999999999 7799999999999999998763
No 11
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=100.00 E-value=2.1e-41 Score=309.05 Aligned_cols=130 Identities=26% Similarity=0.265 Sum_probs=123.4
Q ss_pred CCCCeEEecccCcCCHHHHHHHHHHHHHcCCcee-eEeecC-ch---HHHHHHHHhCCCeEEEEEeCCCCCCCCcCCccc
Q 015044 277 DPRTDVIIVLQHPSDYNVMQDAIAILCENDNICC-QVMKSY-TK---KQLITKLSRSGRKVIIATDHGVGAFLDKIDLLA 351 (414)
Q Consensus 277 D~~~~V~IimGS~SD~~v~~~a~~~L~~~gi~~~-~V~SaH-~p---~~~~~~~~~~g~~ViIavA~G~sa~Lp~~gvvA 351 (414)
.+.++|+|||||+||+++|+||..+|++|||+|+ +|+|+| +| .+|.+.++++|++||||+| |++|||| ||+|
T Consensus 10 ~~~P~V~IimGS~SD~~v~~~a~~~l~~~gi~~ev~V~saHR~p~~l~~~~~~a~~~g~~ViIa~A-G~aahLp--gvvA 86 (173)
T 4grd_A 10 HSAPLVGVLMGSSSDWDVMKHAVAILQEFGVPYEAKVVSAHRMPDEMFDYAEKARERGLRAIIAGA-GGAAHLP--GMLA 86 (173)
T ss_dssp CSSCSEEEEESSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHHTTTTCSEEEEEE-ESSCCHH--HHHH
T ss_pred CCCCeEEEEeCcHhHHHHHHHHHHHHHHcCCCEEEEEEccccCHHHHHHHHHHHHhcCCeEEEEec-cccccch--hhhe
Confidence 4456899999999999999999999999999999 999999 77 6688888889999999999 9999999 9999
Q ss_pred cCcc--EEEecCcCCCCCCcceee--ccCCCCCeEEEEecC--CcchHHHHHHHHHhccCCCcc
Q 015044 352 SGSP--VIGVPVRASGVTGFPHQF--VEMCPKHAILLVPVN--DAKGAARQAMIICDMVHPGGR 409 (414)
Q Consensus 352 g~T~--VIgVP~~~~~l~G~daLl--vqMP~GvpVatV~Id--~~~nAA~~A~~IL~~~~~~~~ 409 (414)
|+|+ |||||++++.++|+|+|+ ||||+|+||+||.|| |++|||++|+|||+++|++++
T Consensus 87 ~~t~~PVIgVPv~~~~l~G~dsLlSivqMP~Gvpvatv~i~~~~a~NAallA~~ILa~~d~~l~ 150 (173)
T 4grd_A 87 AKTTVPVLGVPVASKYLKGVDSLHSIVQMPKGVPVATFAIGEAGAANAALFAVSILSGNSVDYA 150 (173)
T ss_dssp HHCCSCEEEEEECCTTTTTHHHHHHHHCCCTTSCCEECCSSHHHHHHHHHHHHHHHTTSCHHHH
T ss_pred ecCCCCEEEEEcCCCCCCchhHHHHHHhCCCCCCceEEecCCcchHHHHHHHHHHHcCCCHHHH
Confidence 9999 999999999999999999 999999999999998 999999999999999999875
No 12
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6
Probab=100.00 E-value=5.8e-40 Score=297.31 Aligned_cols=133 Identities=38% Similarity=0.619 Sum_probs=127.6
Q ss_pred ccE-EEEEEeCchhHHHHHHHHHhccCcceeeEEeeecCCCcE--EEEEEeCchhHHHHHHHHHhcCccEEEEEecCCch
Q 015044 78 LRR-ISVFVRDESGVVDLIDEVFARRGYNIESLAVSGNKDKGL--FTIVVSGTDRVLQQVIEQLQKLVNVLKVEDFSNEP 154 (414)
Q Consensus 78 Mkr-LSVlVeN~pGVLsRItgLFsRRGyNIeSLtVg~Ted~~i--iTIVV~gde~~veQl~kQL~KLidVikV~dlt~~~ 154 (414)
|+| |+++++|+||+|+||+++|++|||||+||++++++++++ |||+++++++.++|+.+||+||+||++|.++++.+
T Consensus 2 ~~~~IsV~v~NrpGvLarIt~lfs~rg~NI~Sl~v~~t~d~~~sriti~V~~d~~~leqI~kqL~Kl~dV~~V~r~~~~~ 81 (164)
T 2f1f_A 2 ARRILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLSRMTIQTVGDEKVLEQIEKQLHKLVDVLRVSELGQGA 81 (164)
T ss_dssp CEEEEEEEEECCTTHHHHHHHHHHTTTCCCSEEEEEECSCSSEEEEEEEEESCHHHHHHHHHHHHHSTTEEEEEEGGGSC
T ss_pred eEEEEEEEEeCCCcHHHHHHHHHHHCCCCeeeceeeecCCCCEEEEEEEEeccHHHHHHHHHHHcCCCCEEEEEEcCCcc
Confidence 567 999999999999999999999999999999999998876 88999999999999999999999999999999999
Q ss_pred hhheeeeEEEEecCccccc-----------------------cccCCHHHHHHHHHhhccCC-cEEEecccceeeecccC
Q 015044 155 VIERELMLIKVNADPKFCA-----------------------EVSGDPGKVAAVQRNSSTVG-ILEIARTGKTAFRREKL 210 (414)
Q Consensus 155 ~V~REL~LiKV~~~~~~r~-----------------------EvTG~~~KIdafi~~L~~fG-IlEiaRTG~iAl~R~~~ 210 (414)
+|+|||+||||++++++|. |+||+++|+++|+++|+||| |+|++|||.+||.||++
T Consensus 82 ~v~rEl~liKv~~~~~~r~~i~~~~~~fra~ivdv~~~~~~ie~tg~~~ki~~~~~~l~~~g~i~e~~RtG~~a~~r~~~ 161 (164)
T 2f1f_A 82 HVEREIMLVKIQASGYGRDEVKRNTEIFRGQIIDVTPSLYTVQLAGTSGKLDAFLASIRDVAKIVEVARSGVVGLSRGDK 161 (164)
T ss_dssp EEEEEEEEEEEECCTHHHHHHHHHHHHTTCEEEEECSSEEEEEEEECHHHHHHHHHHHTTTSEEEEEEECCCEEEESTTC
T ss_pred cceeEEEEEEEECCcccHHHHHHHHHHcCCEEEEECCCEEEEEEeCCHHHHHHHHHHHHhcCCEEEEECcChhheecCcc
Confidence 9999999999999987765 99999999999999999999 99999999999999975
No 13
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=100.00 E-value=2.2e-41 Score=311.08 Aligned_cols=132 Identities=26% Similarity=0.292 Sum_probs=122.7
Q ss_pred CCCCCeEEecccCcCCHHHHHHHHHHHHHcCCcee-eEeecC-ch---HHHHHHHHhCCCeEEEEEeCCCCCCCCcCCcc
Q 015044 276 TDPRTDVIIVLQHPSDYNVMQDAIAILCENDNICC-QVMKSY-TK---KQLITKLSRSGRKVIIATDHGVGAFLDKIDLL 350 (414)
Q Consensus 276 ~D~~~~V~IimGS~SD~~v~~~a~~~L~~~gi~~~-~V~SaH-~p---~~~~~~~~~~g~~ViIavA~G~sa~Lp~~gvv 350 (414)
.....+|+|||||+||+++|++|..+|++||++|+ +|+|+| +| .+|.++++++|++||||+| |++|||| ||+
T Consensus 18 ~~~~~~V~IimGS~SD~~v~~~a~~~L~~~Gi~~dv~V~SaHR~p~~l~~~~~~a~~~g~~ViIa~A-G~aa~Lp--gvv 94 (182)
T 1u11_A 18 AASAPVVGIIMGSQSDWETMRHADALLTELEIPHETLIVSAHRTPDRLADYARTAAERGLNVIIAGA-GGAAHLP--GMC 94 (182)
T ss_dssp --CCCSEEEEESSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHTTTTTCCEEEEEE-ESSCCHH--HHH
T ss_pred hcCCCEEEEEECcHHHHHHHHHHHHHHHHcCCCeEEEEEcccCCHHHHHHHHHHHHhCCCcEEEEec-CchhhhH--HHH
Confidence 33445899999999999999999999999999999 999999 77 5677777778999999999 9999999 999
Q ss_pred ccCcc--EEEecCcCCCCCCcceee--ccCCCCCeEEEEecC--CcchHHHHHHHHHhccCCCccc
Q 015044 351 ASGSP--VIGVPVRASGVTGFPHQF--VEMCPKHAILLVPVN--DAKGAARQAMIICDMVHPGGRT 410 (414)
Q Consensus 351 Ag~T~--VIgVP~~~~~l~G~daLl--vqMP~GvpVatV~Id--~~~nAA~~A~~IL~~~~~~~~~ 410 (414)
||+|+ |||||++++.++|+|+|| ||||+|+||+||+|| |++|||++|+|||+++|++++.
T Consensus 95 A~~t~~PVIgVP~~~~~l~G~dsLlSivqmP~GvpVatV~I~~a~~~nAallAaqIla~~d~~l~~ 160 (182)
T 1u11_A 95 AAWTRLPVLGVPVESRALKGMDSLLSIVQMPGGVPVGTLAIGASGAKNAALLAASILALYNPALAA 160 (182)
T ss_dssp HHHCSSCEEEEEECCTTTTTHHHHHHHHCCCTTSCCEECCSSHHHHHHHHHHHHHHHGGGCHHHHH
T ss_pred HhccCCCEEEeeCCCCCCCcHHHHHHHhcCCCCCceEEEecCCccchHHHHHHHHHHccCCHHHHH
Confidence 99999 999999998999999999 999999999999999 9999999999999999998764
No 14
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=100.00 E-value=9.8e-40 Score=295.11 Aligned_cols=125 Identities=18% Similarity=0.135 Sum_probs=117.7
Q ss_pred CeEEecccCcCCHHHHHHHHHHHHHcCCcee-eEeecC-ch---HHHHHHHHhC-CCeEEEEEeCCCCCCCCcCCccccC
Q 015044 280 TDVIIVLQHPSDYNVMQDAIAILCENDNICC-QVMKSY-TK---KQLITKLSRS-GRKVIIATDHGVGAFLDKIDLLASG 353 (414)
Q Consensus 280 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~~-~V~SaH-~p---~~~~~~~~~~-g~~ViIavA~G~sa~Lp~~gvvAg~ 353 (414)
++|+|||||+||+++|+||..+|++||++|+ +|+|+| +| .+|.++++++ |.+||||+| |++|||| ||+||+
T Consensus 3 ~~V~Iimgs~SD~~v~~~a~~~l~~~gi~~ev~V~saHR~p~~~~~~~~~a~~~~~~~ViIa~A-G~aa~Lp--gvvA~~ 79 (159)
T 3rg8_A 3 PLVIILMGSSSDMGHAEKIASELKTFGIEYAIRIGSAHKTAEHVVSMLKEYEALDRPKLYITIA-GRSNALS--GFVDGF 79 (159)
T ss_dssp CEEEEEESSGGGHHHHHHHHHHHHHTTCEEEEEECCTTTCHHHHHHHHHHHHTSCSCEEEEEEC-CSSCCHH--HHHHHH
T ss_pred CeEEEEECcHHHHHHHHHHHHHHHHcCCCEEEEEEcccCCHHHHHHHHHHhhhcCCCcEEEEEC-CchhhhH--HHHHhc
Confidence 4799999999999999999999999999999 999999 77 6677777775 799999999 9999999 999999
Q ss_pred cc--EEEecCcCCCCCCcceee--ccCCCCCeEEEEecCCcchHHHHHHHHHhccCCCccc
Q 015044 354 SP--VIGVPVRASGVTGFPHQF--VEMCPKHAILLVPVNDAKGAARQAMIICDMVHPGGRT 410 (414)
Q Consensus 354 T~--VIgVP~~~~~l~G~daLl--vqMP~GvpVatV~Id~~~nAA~~A~~IL~~~~~~~~~ 410 (414)
|+ |||||++++.++|+| || ||||+|+||+|| ||++|||++|+|||+++|++++.
T Consensus 80 t~~PVIgVP~~~~~l~G~d-LlS~vqmp~GvpVatv--~~~~nAa~lA~~Il~~~d~~l~~ 137 (159)
T 3rg8_A 80 VKGATIACPPPSDSFAGAD-IYSSLRMPSGISPALV--LEPKNAALLAARIFSLYDKEIAD 137 (159)
T ss_dssp SSSCEEECCCCCCGGGGTH-HHHHHCCCTTCCCEEC--CSHHHHHHHHHHHHTTTCHHHHH
T ss_pred cCCCEEEeeCCCCCCCCcc-HHHHHhCCCCCceEEe--cCchHHHHHHHHHHhCCCHHHHH
Confidence 99 999999998999999 88 999999999998 99999999999999999998853
No 15
>2ywx_A Phosphoribosylaminoimidazole carboxylase catalyti; rossmann fold, structural genomics, NPPSFA; 2.31A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=9.4e-40 Score=294.56 Aligned_cols=126 Identities=25% Similarity=0.293 Sum_probs=115.6
Q ss_pred eEEecccCcCCHHHHHHHHHHHHHcCCcee-eEeecC-chHHHHHHHHhCCCeEEEEEeCCCCCCCCcCCccccCcc--E
Q 015044 281 DVIIVLQHPSDYNVMQDAIAILCENDNICC-QVMKSY-TKKQLITKLSRSGRKVIIATDHGVGAFLDKIDLLASGSP--V 356 (414)
Q Consensus 281 ~V~IimGS~SD~~v~~~a~~~L~~~gi~~~-~V~SaH-~p~~~~~~~~~~g~~ViIavA~G~sa~Lp~~gvvAg~T~--V 356 (414)
.|+|||||+||+++|+||..+|++||++|+ +|+|+| +|.+..+..+....+||||+| |++|||| ||+||+|+ |
T Consensus 1 ~V~Iimgs~SD~~v~~~a~~~l~~~gi~~dv~V~saHR~p~~~~~~~~~a~~~ViIa~A-G~aa~Lp--gvva~~t~~PV 77 (157)
T 2ywx_A 1 MICIIMGSESDLKIAEKAVNILKEFGVEFEVRVASAHRTPELVEEIVKNSKADVFIAIA-GLAAHLP--GVVASLTTKPV 77 (157)
T ss_dssp CEEEEESSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHCCCSEEEEEE-ESSCCHH--HHHHTTCSSCE
T ss_pred CEEEEEccHHHHHHHHHHHHHHHHcCCCeEEEEEcccCCHHHHHHHHHhcCCCEEEEEc-CchhhhH--HHHHhccCCCE
Confidence 489999999999999999999999999999 999999 775555555433339999999 9999999 99999999 9
Q ss_pred EEecCcCCCCCCcceee--ccCCCCCeEEEEecCCcchHHHHHHHHHhccCCCccc
Q 015044 357 IGVPVRASGVTGFPHQF--VEMCPKHAILLVPVNDAKGAARQAMIICDMVHPGGRT 410 (414)
Q Consensus 357 IgVP~~~~~l~G~daLl--vqMP~GvpVatV~Id~~~nAA~~A~~IL~~~~~~~~~ 410 (414)
||||+ ++.++|+|+|| ||||+|+||+||+|||++|||++|+|||+++|++++.
T Consensus 78 IgVP~-~~~l~G~daLlS~vqmP~gvpVatV~I~~~~nAa~lA~~Il~~~d~~l~~ 132 (157)
T 2ywx_A 78 IAVPV-DAKLDGLDALLSSVQMPPGIPVATVGIDRGENAAILALEILALKDENIAK 132 (157)
T ss_dssp EEEEE-CSSGGGHHHHHHHHSCCTTSCCEECCTTCHHHHHHHHHHHHTTTCHHHHH
T ss_pred EEecC-CCccCcHHHHHHHhcCCCCCeeEEEecCCcHHHHHHHHHHHhcCCHHHHH
Confidence 99999 66899999999 9999999999999999999999999999999988764
No 16
>2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.1e-34 Score=295.71 Aligned_cols=126 Identities=15% Similarity=0.162 Sum_probs=118.3
Q ss_pred CCeEEecccCcCCHHHHHHHHHHHHHcCCcee-eEeecC-ch---HHHHHHHHhCCC-eEEEEEeCCCCCCCCcCCcccc
Q 015044 279 RTDVIIVLQHPSDYNVMQDAIAILCENDNICC-QVMKSY-TK---KQLITKLSRSGR-KVIIATDHGVGAFLDKIDLLAS 352 (414)
Q Consensus 279 ~~~V~IimGS~SD~~v~~~a~~~L~~~gi~~~-~V~SaH-~p---~~~~~~~~~~g~-~ViIavA~G~sa~Lp~~gvvAg 352 (414)
..+|+|||||+||+++|++|+.+|++||++|+ +|+|+| +| .++.++++++|. +||||+| ||+|||| ||+||
T Consensus 265 ~~~V~Ii~gs~SD~~~~~~a~~~l~~~gi~~~v~V~saHR~p~~~~~~~~~~~~~g~~~viIa~A-G~~a~Lp--gvva~ 341 (425)
T 2h31_A 265 QCRVVVLMGSTSDLGHCEKIKKACGNFGIPCELRVTSAHKGPDETLRIKAEYEGDGIPTVFVAVA-GRSNGLG--PVMSG 341 (425)
T ss_dssp CCEEEEEESCGGGHHHHHHHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHHHTTCCCEEEEEEC-CSSCCHH--HHHHH
T ss_pred CCeEEEEecCcccHHHHHHHHHHHHHcCCceEEeeeeccCCHHHHHHHHHHHHHCCCCeEEEEEc-CcccchH--hHHhc
Confidence 45899999999999999999999999999999 999999 77 678888888999 6999999 9999999 99999
Q ss_pred Ccc--EEEecCcCCCCCCcceee--ccCCCCCeEEEEecCCcchHHHHHHHHHhccCCCccc
Q 015044 353 GSP--VIGVPVRASGVTGFPHQF--VEMCPKHAILLVPVNDAKGAARQAMIICDMVHPGGRT 410 (414)
Q Consensus 353 ~T~--VIgVP~~~~~l~G~daLl--vqMP~GvpVatV~Id~~~nAA~~A~~IL~~~~~~~~~ 410 (414)
+|+ |||||++ ++++|+|+|| ||||+|+||+||+ +++|||++|+|||++.|++++.
T Consensus 342 ~t~~PVIgvP~~-~~~~G~daLls~vqmp~g~pvatv~--~~~nAa~~A~~Il~~~~~~l~~ 400 (425)
T 2h31_A 342 NTAYPVISCPPL-TPDWGVQDVWSSLRLPSGLGCSTVL--SPEGSAQFAAQIFGLSNHLVWS 400 (425)
T ss_dssp HCSSCEEECCCC-CTTTHHHHGGGTSSCCSSCCCEECC--CHHHHHHHHHHHHHTTCHHHHH
T ss_pred cCCCCEEEeeCc-cccccHHHHHHHhcCCCCCceEEec--CchHHHHHHHHHHccCCHHHHH
Confidence 999 9999997 5899999999 9999999999996 8999999999999999988653
No 17
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=98.81 E-value=2.6e-08 Score=85.48 Aligned_cols=95 Identities=24% Similarity=0.440 Sum_probs=69.7
Q ss_pred ccE-EEEEEeCchhHHHHHHHHHhccCcceeeEEeeecCCCcEEEEEEeCchhHHHHHHHHHhcCccEEEEEecCCchhh
Q 015044 78 LRR-ISVFVRDESGVVDLIDEVFARRGYNIESLAVSGNKDKGLFTIVVSGTDRVLQQVIEQLQKLVNVLKVEDFSNEPVI 156 (414)
Q Consensus 78 Mkr-LSVlVeN~pGVLsRItgLFsRRGyNIeSLtVg~Ted~~iiTIVV~gde~~veQl~kQL~KLidVikV~dlt~~~~V 156 (414)
|+| |+++++|+||+|+||+++|+++|+||++++++.+.++++++++++ +.+...++.++..-.+...
T Consensus 5 ~~~~i~v~v~d~~G~l~~i~~~la~~~inI~~i~~~~~~~~~~~~~~~~-d~~~a~~~L~~~G~~v~~~----------- 72 (144)
T 2f06_A 5 VAKQLSIFLENKSGRLTEVTEVLAKENINLSALCIAENADFGILRGIVS-DPDKAYKALKDNHFAVNIT----------- 72 (144)
T ss_dssp EEEEEEEEECSSSSHHHHHHHHHHHTTCCEEEEEEEECSSCEEEEEEES-CHHHHHHHHHHTTCCEEEE-----------
T ss_pred EEEEEEEEecCCCcHHHHHHHHHHHCCCCEEEEEEEecCCCCEEEEEeC-CHHHHHHHHHHcCCeEeee-----------
Confidence 344 999999999999999999999999999999998888887666654 4445555554432111100
Q ss_pred heeeeEEEEecCccccccccCCHHHHHHHHHhhccCCc-EE
Q 015044 157 ERELMLIKVNADPKFCAEVSGDPGKVAAVQRNSSTVGI-LE 196 (414)
Q Consensus 157 ~REL~LiKV~~~~~~r~EvTG~~~KIdafi~~L~~fGI-lE 196 (414)
++ +-| ++.+.|+-+..+.+.|...|| ++
T Consensus 73 --sv--v~v--------~~~d~pGvla~i~~~L~~~~InI~ 101 (144)
T 2f06_A 73 --DV--VGI--------SCPNVPGALAKVLGFLSAEGVFIE 101 (144)
T ss_dssp --EE--EEE--------EEESSTTHHHHHHHHHHHTTCCEE
T ss_pred --eE--EEE--------EeCCCCcHHHHHHHHHHHCCCCEE
Confidence 11 211 566889999999999999886 53
No 18
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=98.73 E-value=7.2e-08 Score=75.03 Aligned_cols=73 Identities=21% Similarity=0.347 Sum_probs=61.6
Q ss_pred EEEEEeCchhHHHHHHHHHhccCcceeeEEeeecCCCcEEEEEEe-CchhHHHHHHHHHhcCccEEEEEecCCc
Q 015044 81 ISVFVRDESGVVDLIDEVFARRGYNIESLAVSGNKDKGLFTIVVS-GTDRVLQQVIEQLQKLVNVLKVEDFSNE 153 (414)
Q Consensus 81 LSVlVeN~pGVLsRItgLFsRRGyNIeSLtVg~Ted~~iiTIVV~-gde~~veQl~kQL~KLidVikV~dlt~~ 153 (414)
|.+.+.|+||+|++|+++|++.|+||.++.+....+...+++.+. .+...++++.++|+++-+|..|..+..-
T Consensus 8 l~v~~~Dr~G~L~~I~~~la~~~inI~~i~~~~~~~~~~~~i~v~~~~~~~l~~l~~~L~~~~~V~~v~~~~~~ 81 (88)
T 2ko1_A 8 IRIVGEDKNGMTNQITGVISKFDTNIRTIVLNAKDGIFTCNLMIFVKNTDKLTTLMDKLRKVQGVFTVERLSNL 81 (88)
T ss_dssp EEEEEECCTTHHHHHHHHHTTSSSCEEEEEEEECSSEEEEEEEEEESSHHHHHHHHHHHTTCTTEEEEEEECSC
T ss_pred EEEEEECCCcHHHHHHHHHHHCCCCeEEEEEEEcCCEEEEEEEEEECCHHHHHHHHHHHhcCCCceEEEEeccc
Confidence 899999999999999999999999999999987655223555554 3567899999999999999999877653
No 19
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=98.61 E-value=2.8e-07 Score=82.70 Aligned_cols=107 Identities=14% Similarity=0.169 Sum_probs=79.4
Q ss_pred EEEEEeCchhHHHHHHHHHhccCcceeeEEeeecCCCcEEEEEEeCchhHHHHHHHHHhcCcc----EEEEEecCCchhh
Q 015044 81 ISVFVRDESGVVDLIDEVFARRGYNIESLAVSGNKDKGLFTIVVSGTDRVLQQVIEQLQKLVN----VLKVEDFSNEPVI 156 (414)
Q Consensus 81 LSVlVeN~pGVLsRItgLFsRRGyNIeSLtVg~Ted~~iiTIVV~gde~~veQl~kQL~KLid----VikV~dlt~~~~V 156 (414)
|+|+..|+||++++|+++|+++|+||.++....+.+.-.+++++.+++...++|.++|.++.+ .+.+...+..+ -
T Consensus 9 itv~~~DrpGiva~vt~~La~~g~NI~d~~~~~~~~~f~~~~~v~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~-~ 87 (192)
T 1u8s_A 9 ITAVGTDRPGICNEVVRLVTQAGCNIIDSRIAMFGKEFTLLMLISGSPSNITRVETTLPLLGQQHDLITMMKRTSPHD-H 87 (192)
T ss_dssp EEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEECHHHHHHHHHHHHHHHHHHTCEEEEEEECCCC-C
T ss_pred EEEEcCCCCcHHHHHHHHHHHCCCCEEeeeeeecCCceEEEEEEecCCCCHHHHHHHHHHHHHhcCCEEEEEeCCCCC-C
Confidence 999999999999999999999999999999988554444788887776788999998886654 55566555433 2
Q ss_pred heeeeEEEEecCccccccccCCHHHHHHHHHhhccCCc
Q 015044 157 ERELMLIKVNADPKFCAEVSGDPGKVAAVQRNSSTVGI 194 (414)
Q Consensus 157 ~REL~LiKV~~~~~~r~EvTG~~~KIdafi~~L~~fGI 194 (414)
.++...++|.+.. ...++-+.++.+.|..+|+
T Consensus 88 ~~~~~~~~l~v~~------~D~~Gil~~v~~~l~~~~~ 119 (192)
T 1u8s_A 88 QTHAYTVEVYVES------DDKLGLTEKFTQFFAQRQI 119 (192)
T ss_dssp CCCSEEEEEEEEE------SCCTTHHHHHHHHHHHTTC
T ss_pred ccCCceEEEEEEe------CCCccHHHHHHHHHHHcCC
Confidence 4444444444322 2357778888889998885
No 20
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7
Probab=98.41 E-value=1.9e-07 Score=73.75 Aligned_cols=67 Identities=19% Similarity=0.280 Sum_probs=53.5
Q ss_pred ccE-EEEEEeCchhHHHHHHHHHhccCcceeeEEeeecCCCcEEEEEEeCc-hhHHHHHHHHHhcCccE
Q 015044 78 LRR-ISVFVRDESGVVDLIDEVFARRGYNIESLAVSGNKDKGLFTIVVSGT-DRVLQQVIEQLQKLVNV 144 (414)
Q Consensus 78 Mkr-LSVlVeN~pGVLsRItgLFsRRGyNIeSLtVg~Ted~~iiTIVV~gd-e~~veQl~kQL~KLidV 144 (414)
|+. |++.+.|+||+|++|+++|+++|+||.++..........+++.++.+ ...++++.++|+++-+.
T Consensus 4 ~~~~l~v~~~DrpGila~vt~~la~~~~NI~~i~~~~~~~~~~~~i~v~~~~~~~l~~l~~~L~~~~~~ 72 (91)
T 1zpv_A 4 MKAIITVVGKDKSGIVAGVSGKIAELGLNIDDISQTVLDEYFTMMAVVSSDEKQDFTYLRNEFEAFGQT 72 (91)
T ss_dssp EEEEEEEEESCCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEESSCCCHHHHHHHHHHHHHH
T ss_pred ceEEEEEEECCCCCHHHHHHHHHHHcCCCEEEEEeEEEcCEEEEEEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 444 99999999999999999999999999999998766322366665433 35789999999887654
No 21
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=97.69 E-value=0.00012 Score=69.56 Aligned_cols=76 Identities=14% Similarity=0.269 Sum_probs=61.0
Q ss_pred EEEEEeCchhHHHHHHHHHhccCcceeeEEeeecC----CCcE--EEEEEeCchhHHHHHHHHHhcCccEEEEEecCCch
Q 015044 81 ISVFVRDESGVVDLIDEVFARRGYNIESLAVSGNK----DKGL--FTIVVSGTDRVLQQVIEQLQKLVNVLKVEDFSNEP 154 (414)
Q Consensus 81 LSVlVeN~pGVLsRItgLFsRRGyNIeSLtVg~Te----d~~i--iTIVV~gde~~veQl~kQL~KLidVikV~dlt~~~ 154 (414)
|.+..+|+||+|+.|+.+++..+.||.++++.... + +. ++|-++.. .++.+.++|+++-+|.+|+....-.
T Consensus 7 L~I~a~DRpGLLsDIt~vLAe~kiNIltIn~~~~~kG~~n-g~A~I~IEV~d~--~Le~LL~kLrkI~gV~~V~Rv~~~~ 83 (223)
T 1y7p_A 7 LRIIAENKIGVLRDLTTIIAEEGGNITFAQTFLIKHGEHE-GKALIYFEIEGG--DFEKILERVKTFDYIIEIEEEESFE 83 (223)
T ss_dssp EEEEEECCTTHHHHHHHHCC----CEEEEEEEECCSSTTT-TEEEEEEEECSS--CHHHHHHHHHTCTTEEEEEEECCHH
T ss_pred EEEEEcCCCCHHHHHHHHHHHcCCCceEEEEEccccCCcC-CEEEEEEEECCC--CHHHHHHHHhCCCCeeEEEEEcchh
Confidence 99999999999999999999999999999998765 3 43 66556544 9999999999999999999987766
Q ss_pred hhhee
Q 015044 155 VIERE 159 (414)
Q Consensus 155 ~V~RE 159 (414)
.++--
T Consensus 84 ~i~gk 88 (223)
T 1y7p_A 84 RVFGK 88 (223)
T ss_dssp HHTCE
T ss_pred hhcCc
Confidence 65543
No 22
>2re1_A Aspartokinase, alpha and beta subunits; structural genomics, protein structure initiative, midwest center for structural genomics; 2.75A {Neisseria meningitidis MC58}
Probab=97.48 E-value=0.00031 Score=62.04 Aligned_cols=110 Identities=18% Similarity=0.235 Sum_probs=73.0
Q ss_pred cEEEEE-EeCchhHHHHHHHHHhccCcceeeEEeeecCCCc--EEEEEEeCch-hHHHHHHHHHhcCccEEEEEecCCch
Q 015044 79 RRISVF-VRDESGVVDLIDEVFARRGYNIESLAVSGNKDKG--LFTIVVSGTD-RVLQQVIEQLQKLVNVLKVEDFSNEP 154 (414)
Q Consensus 79 krLSVl-VeN~pGVLsRItgLFsRRGyNIeSLtVg~Ted~~--iiTIVV~gde-~~veQl~kQL~KLidVikV~dlt~~~ 154 (414)
.+|+++ +.|+||.+.+|...|++.|+||+.++.+.+.+ | .++++|+.++ +...++.+++.+-... ..-
T Consensus 26 ~~i~v~~~~~~~G~~~~if~~La~~~Invd~i~~s~~~~-g~~~isf~v~~~~~~~a~~~l~~~~~~l~~-------~~i 97 (167)
T 2re1_A 26 ARINVRGVPDKPGVAYQILGAVADANIEVDMIIQNVGSE-GTTDFSFTVPRGDYKQTLEILSERQDSIGA-------ASI 97 (167)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCCCCCEEEC-----CEEEEEEEECGGGHHHHHHHHHHSSTTTTC-------SEE
T ss_pred EEEEEecCCCCcCHHHHHHHHHHHcCCeEEEEEcCCCCC-CeeEEEEEEechHHHHHHHHHHHHHHHcCC-------ceE
Confidence 348888 89999999999999999999999999877655 5 3888887533 2233333333222222 111
Q ss_pred hhheeeeEEEEecCccccccccCCHHHHHHHHHhhccCCc-EEEeccc
Q 015044 155 VIERELMLIKVNADPKFCAEVSGDPGKVAAVQRNSSTVGI-LEIARTG 201 (414)
Q Consensus 155 ~V~REL~LiKV~~~~~~r~EvTG~~~KIdafi~~L~~fGI-lEiaRTG 201 (414)
.+.+.++++.|-.. .+.+.++-...+++.|..+|| +++.-|.
T Consensus 98 ~~~~~~a~vsvvG~-----~m~~~~Gv~a~i~~aL~~~~InI~~ists 140 (167)
T 2re1_A 98 DGDDTVCKVSAVGL-----GMRSHVGVAAKIFRTLAEEGINIQMISTS 140 (167)
T ss_dssp EEESSEEEEEEECS-----SCTTCCCHHHHHHHHHHHTTCCCCEEEEC
T ss_pred EecCCEEEEEEECC-----CcCCCcCHHHHHHHHHHHCCCcEEEEEcc
Confidence 23455666666544 577888999999999999987 5554343
No 23
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=97.29 E-value=0.00091 Score=67.59 Aligned_cols=71 Identities=15% Similarity=0.388 Sum_probs=61.1
Q ss_pred EEEEEEeCchhHHHHHHHHHhccCcceeeEEeeecCCCcEEEEEEeCchhHHHHHHHHHhcCccEEEEEec
Q 015044 80 RISVFVRDESGVVDLIDEVFARRGYNIESLAVSGNKDKGLFTIVVSGTDRVLQQVIEQLQKLVNVLKVEDF 150 (414)
Q Consensus 80 rLSVlVeN~pGVLsRItgLFsRRGyNIeSLtVg~Ted~~iiTIVV~gde~~veQl~kQL~KLidVikV~dl 150 (414)
||.+.=+|+||++.+|+.+|++.|+||.++.++...+.+++.|-+++....-+.+.++|+++-.|++|..+
T Consensus 333 rl~~~h~d~PGvi~~i~~iL~~~~iNIa~m~~~r~g~~A~~vidvD~~~~~~~~~l~~l~~i~~v~~vr~l 403 (404)
T 1sc6_A 333 RLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQTSAQMGYVVIDIEADEDVAEKALQAMKAIPGTIRARLL 403 (404)
T ss_dssp EEEEEEESCTTHHHHHHHHHHHTTCEEEEEEEEECSSEEEEEEEEECCHHHHHHHHHHHHTSTTEEEEEEC
T ss_pred eEEEEeCCCCCHHHHHHHHHHHcCCCHHHhhccCCCCEEEEEEEcCCCCCCCHHHHHHHhcCCCeeEEEEe
Confidence 48899999999999999999999999999999985555567777887644678899999999999998754
No 24
>2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli}
Probab=97.28 E-value=0.0014 Score=55.76 Aligned_cols=103 Identities=14% Similarity=0.243 Sum_probs=76.8
Q ss_pred EEEEEEeCchhHHHHHHHHHhccCcceeeEEeeecCCCcEEEEEEe-CchhHHHHHHHHHhcCccEEEEEecCCchhhhe
Q 015044 80 RISVFVRDESGVVDLIDEVFARRGYNIESLAVSGNKDKGLFTIVVS-GTDRVLQQVIEQLQKLVNVLKVEDFSNEPVIER 158 (414)
Q Consensus 80 rLSVlVeN~pGVLsRItgLFsRRGyNIeSLtVg~Ted~~iiTIVV~-gde~~veQl~kQL~KLidVikV~dlt~~~~V~R 158 (414)
+|.|...|++|+|+.|+.+++..++||.++.+... |.+.+.+. .+.+.+..+..+++++-++..+....-.+.
T Consensus 2 ~~~v~~~dr~g~l~~i~~~l~~~~~ni~~~~~~~~---g~i~~~~~~~~~~~~~~L~~~l~~i~~~~~~~~~~~~~~--- 75 (190)
T 2jhe_A 2 RLEVFCEDRLGLTRELLDLLVLRGIDLRGIEIDPI---GRIYLNFAELEFESFSSLMAEIRRIAGVTDVRTVPWMPS--- 75 (190)
T ss_dssp EEEEEECSCTTHHHHHHHHHHHTTCCEEEEEEETT---TEEEEEECCCCHHHHHHHHHHHHHSTTEEEEEEESCCTT---
T ss_pred EEEEEEecCCcHHHHHHHHHHHcCCCeEEEEEecC---CEEEEEEEeCCHHHHHHHHHHHHcCCCeeEEEEecCCcc---
Confidence 37899999999999999999999999999999655 55555554 456789999999999999999876443221
Q ss_pred eeeEEEEecCccccccccCCHHHHHHHHHhhccCCcEEEecccceeee
Q 015044 159 ELMLIKVNADPKFCAEVSGDPGKVAAVQRNSSTVGILEIARTGKTAFR 206 (414)
Q Consensus 159 EL~LiKV~~~~~~r~EvTG~~~KIdafi~~L~~fGIlEiaRTG~iAl~ 206 (414)
.+ ....++++++.+. -||+-+=+.|+|-..
T Consensus 76 ------------~~-----~~~~l~~il~~~~-~gvi~~D~~g~I~~~ 105 (190)
T 2jhe_A 76 ------------ER-----EHLALSALLEALP-EPVLSVDMKSKVDMA 105 (190)
T ss_dssp ------------TH-----HHHHHHHHHHHCS-SCEEEECTTCBEEEE
T ss_pred ------------HH-----HHHHHHHHHHhCC-CcEEEEcCCCCEEEE
Confidence 00 1235566666654 577777777776554
No 25
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=97.05 E-value=0.0015 Score=58.40 Aligned_cols=62 Identities=21% Similarity=0.294 Sum_probs=46.9
Q ss_pred EEEEEeCchhHHHHHHHHHhccCcceeeEEeeecC------CCcE--EEEEEeC-chhHHHHHHHHHhcCc
Q 015044 81 ISVFVRDESGVVDLIDEVFARRGYNIESLAVSGNK------DKGL--FTIVVSG-TDRVLQQVIEQLQKLV 142 (414)
Q Consensus 81 LSVlVeN~pGVLsRItgLFsRRGyNIeSLtVg~Te------d~~i--iTIVV~g-de~~veQl~kQL~KLi 142 (414)
|.+...|+||++++|+++|+++|+||+++...... ..+. |++.+.. +....++|.++|.++.
T Consensus 96 l~v~~~D~~Gil~~v~~~l~~~~~nI~~~~~~t~~~~~~~~~~~~F~~~~~~~~~~~~~~~~l~~~l~~~~ 166 (192)
T 1u8s_A 96 VYVESDDKLGLTEKFTQFFAQRQIGMASLSAQTISKDKLHSEQNQFHIAISARVDSGCNLMQLQEEFDALC 166 (192)
T ss_dssp EEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEEEC--------CEEEEEEEEEECTTSCHHHHHHHHHHHH
T ss_pred EEEEeCCCccHHHHHHHHHHHcCCcHHHhhhhcccCCccCCCCCEEEEEEEEeCCCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999887443 3344 6666653 2335777877776543
No 26
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=97.02 E-value=0.004 Score=63.54 Aligned_cols=72 Identities=14% Similarity=0.333 Sum_probs=62.0
Q ss_pred cEEEEEEeCchhHHHHHHHHHhccCcceeeEEeeecCCCcEEEEEEeCchhHHHHHHHHHhcCccEEEEEec
Q 015044 79 RRISVFVRDESGVVDLIDEVFARRGYNIESLAVSGNKDKGLFTIVVSGTDRVLQQVIEQLQKLVNVLKVEDF 150 (414)
Q Consensus 79 krLSVlVeN~pGVLsRItgLFsRRGyNIeSLtVg~Ted~~iiTIVV~gde~~veQl~kQL~KLidVikV~dl 150 (414)
.||.+.=+|.||+|.+|+.+|++.|+||+...-....+-++.-+-+++..+.-+.+.++|+++-.|++|..+
T Consensus 344 ~r~~~~h~n~p~~~~~i~~~~~~~~~ni~~~~~~~~~~~~y~~~d~~~~~~~~~~~~~~l~~~~~~~~~r~~ 415 (416)
T 3k5p_A 344 TRFMHVHENRPGILNSLMNVFSHHHINIASQFLQTDGEVGYLVMEADGVGEASDAVLQEIREIPGTIRARLL 415 (416)
T ss_dssp EEEEEEECCCTTHHHHHHHHHHHTTCCEEEEEEEECSSCEEEEEEECCCHHHHHHHHHHHHTSTTEEEEEEE
T ss_pred eEEEEEecCCccHHHHHHHHHHHcCCCHHHHhccCCCceEEEEEEecCCCCCcHHHHHHHHhCCCEEEEEEe
Confidence 459999999999999999999999999999997777777776666764455678999999999999999764
No 27
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=96.72 E-value=0.0056 Score=55.36 Aligned_cols=72 Identities=22% Similarity=0.259 Sum_probs=50.4
Q ss_pred EEEEEeCchhHHHHHHHHHhccCcceeeEEeeecC----CCcE--EEEEEeCc-hhHHHHHHHHHhcC----ccEEEEEe
Q 015044 81 ISVFVRDESGVVDLIDEVFARRGYNIESLAVSGNK----DKGL--FTIVVSGT-DRVLQQVIEQLQKL----VNVLKVED 149 (414)
Q Consensus 81 LSVlVeN~pGVLsRItgLFsRRGyNIeSLtVg~Te----d~~i--iTIVV~gd-e~~veQl~kQL~KL----idVikV~d 149 (414)
|.|...|+||++.+|+++|+++|.||..+...... ..++ |++.+..+ ... ++|.+.|.++ -=-+.+.+
T Consensus 96 ltv~g~DrpGiva~Vt~~La~~g~nI~~~~~~t~~~~~~~~~~F~m~~~~~~~~~~~-~~l~~~l~~~a~~l~~di~~~~ 174 (195)
T 2nyi_A 96 LYVEGPDSEGIVEAVTAVLAKKGANIVELETETLPAPFAGFTLFRMGSRVAFPFPLY-QEVVTALSRVEEEFGVDIDLEE 174 (195)
T ss_dssp EEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEEECSSTTCEEEEEEEEEEEEGGGH-HHHHHHHHHHHHHHTCEEEEEE
T ss_pred EEEEeCCCcCHHHHHHHHHHHcCCCEEEceeeecccccCCCCeEEEEEEEEcCCCcc-HHHHHHHHHHHHHcCeEEEEEE
Confidence 99999999999999999999999999999887543 3355 66666532 333 6777766533 22345555
Q ss_pred cCCc
Q 015044 150 FSNE 153 (414)
Q Consensus 150 lt~~ 153 (414)
.++.
T Consensus 175 ~~~~ 178 (195)
T 2nyi_A 175 VVEG 178 (195)
T ss_dssp CC--
T ss_pred Cccc
Confidence 5543
No 28
>2dt9_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; 2.15A {Thermus thermophilus} PDB: 2zho_A
Probab=96.54 E-value=0.0097 Score=52.33 Aligned_cols=101 Identities=12% Similarity=0.219 Sum_probs=67.9
Q ss_pred EEEE-EeCchhHHHHHHHHHhccCcceeeEEeeecC-CCc--EEEEEEeCch-hHHHHHHHHHhcCccEEEEEecCCchh
Q 015044 81 ISVF-VRDESGVVDLIDEVFARRGYNIESLAVSGNK-DKG--LFTIVVSGTD-RVLQQVIEQLQKLVNVLKVEDFSNEPV 155 (414)
Q Consensus 81 LSVl-VeN~pGVLsRItgLFsRRGyNIeSLtVg~Te-d~~--iiTIVV~gde-~~veQl~kQL~KLidVikV~dlt~~~~ 155 (414)
|++. +.|+||++.||...|++.|+||+-++.+.+. +.| -++++|..++ +...++.+++.+-... .|.
T Consensus 19 Itv~g~~~~~G~~a~if~~La~~~InVd~I~q~~~~~~~g~~~isf~V~~~d~~~a~~~L~~~~~~~~~-~v~------- 90 (167)
T 2dt9_A 19 IGLIGIPDQPGIAAKVFQALAERGIAVDMIIQGVPGHDPSRQQMAFTVKKDFAQEALEALEPVLAEIGG-EAI------- 90 (167)
T ss_dssp EEEEEEECSTTHHHHHHHHHHHHTCCCSCEEBCCCCSCTTEEEEEEEEEGGGHHHHHHHHHHHHHHHCC-EEE-------
T ss_pred EEEecCCCCCCHHHHHHHHHHHcCCcEEEEEcCCCCCCCCceEEEEEEehHHHHHHHHHHHHHHHHhCC-cEE-------
Confidence 4443 3899999999999999999999999987653 345 3888887533 2222333332221221 222
Q ss_pred hheeeeEEEEecCccccccccCCHHHHHHHHHhhccCCc
Q 015044 156 IERELMLIKVNADPKFCAEVSGDPGKVAAVQRNSSTVGI 194 (414)
Q Consensus 156 V~REL~LiKV~~~~~~r~EvTG~~~KIdafi~~L~~fGI 194 (414)
+++.++++-|-.. .+.+.|+-...+++.|.+.||
T Consensus 91 ~~~~~a~vsvVG~-----gm~~~~Gv~a~~f~aL~~~~I 124 (167)
T 2dt9_A 91 LRPDIAKVSIVGV-----GLASTPEVPAKMFQAVASTGA 124 (167)
T ss_dssp EECSEEEEEEEES-----SGGGSTHHHHHHHHHHHHTTC
T ss_pred EeCCEEEEEEECC-----CcccCcCHHHHHHHHHHHCCC
Confidence 3456666665443 677789999999999998775
No 29
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=96.48 E-value=0.0062 Score=59.74 Aligned_cols=98 Identities=13% Similarity=0.183 Sum_probs=66.8
Q ss_pred ccE--EEEEEeCchhHHHHHHHHHhccCcceeeEEeeecCCCcE--EEEEEeCch--hHHHHHHHHHhcCcc----EEEE
Q 015044 78 LRR--ISVFVRDESGVVDLIDEVFARRGYNIESLAVSGNKDKGL--FTIVVSGTD--RVLQQVIEQLQKLVN----VLKV 147 (414)
Q Consensus 78 Mkr--LSVlVeN~pGVLsRItgLFsRRGyNIeSLtVg~Ted~~i--iTIVV~gde--~~veQl~kQL~KLid----VikV 147 (414)
|.+ |++...|+||..++||+.++++|.||..+........+. |++.++.++ ...+++.+.|+.+-+ -+++
T Consensus 20 ~~~~iLtv~c~DrpGIVa~VS~~La~~g~NI~d~~q~~d~~~g~FfMr~~~~~~~~~~~~~~L~~~l~~la~~l~m~~~l 99 (302)
T 3o1l_A 20 MRTFRLVIACPDRVGIVAKVSNFLASHNGWITEASHHSDNLSGWFFMRHEIRADTLPFDLDGFREAFTPIAEEFSMDWRI 99 (302)
T ss_dssp CCEEEEEEEEECCTTHHHHHHHHHHHTTCCEEEEEEEEETTTTEEEEEEEEEGGGSSSCHHHHHHHHHHHHHHHTCEEEE
T ss_pred cceEEEEEECCCCCCHHHHHHHHHHHCCCCEEEeeEEecCCCCeEEEEEEEecCCCCCCHHHHHHHHHHHHHHhCCeeee
Confidence 444 999999999999999999999999999999886555665 677776543 357777776654321 1333
Q ss_pred EecCCchhhheeeeEEEEecCccccccccCCHHHHHHHHHhhc
Q 015044 148 EDFSNEPVIERELMLIKVNADPKFCAEVSGDPGKVAAVQRNSS 190 (414)
Q Consensus 148 ~dlt~~~~V~REL~LiKV~~~~~~r~EvTG~~~KIdafi~~L~ 190 (414)
.+.+.. .|=.. =++|....+.++++..+
T Consensus 100 ~~~~~~---~ri~v------------l~Sg~g~nl~~ll~~~~ 127 (302)
T 3o1l_A 100 TDSAQK---KRVVL------------MASRESHCLADLLHRWH 127 (302)
T ss_dssp EETTSC---CEEEE------------EECSCCHHHHHHHHHHH
T ss_pred cccCCC---cEEEE------------EEeCCchhHHHHHHHHH
Confidence 333221 12111 35777777888887654
No 30
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=96.43 E-value=0.0052 Score=59.91 Aligned_cols=99 Identities=11% Similarity=0.149 Sum_probs=66.9
Q ss_pred ccE--EEEEEeCchhHHHHHHHHHhccCcceeeEEeeecCCCcE--EEEEEeCc----hhHHHHHHHHHhcCcc----EE
Q 015044 78 LRR--ISVFVRDESGVVDLIDEVFARRGYNIESLAVSGNKDKGL--FTIVVSGT----DRVLQQVIEQLQKLVN----VL 145 (414)
Q Consensus 78 Mkr--LSVlVeN~pGVLsRItgLFsRRGyNIeSLtVg~Ted~~i--iTIVV~gd----e~~veQl~kQL~KLid----Vi 145 (414)
|++ |++...|+||..++||+.|+.+|.||..+........+. |++.++.+ ....+++.+.++.+-+ -+
T Consensus 8 ~~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~~~~~~~~~L~~~f~~la~~~~m~~ 87 (292)
T 3lou_A 8 PHQFVLTLSCPSAAGQVAAVVGLLDRHRCYVDELTVFDDDLSARFFVRCVFHATDDADALRVDALRREFEPIAERFRMQW 87 (292)
T ss_dssp CCEEEEEEEEESCSCHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEECC----CCHHHHHHHHHHHHHHHTCEE
T ss_pred CCcEEEEEEcCCCCCHHHHHHHHHHHCCCCEEeeEEEecCCCCceEEEEEEEccCcccCCCHHHHHHHHHHHHHhcCcEE
Confidence 444 999999999999999999999999999999885555565 67766654 3456777766644321 24
Q ss_pred EEEecCCchhhheeeeEEEEecCccccccccCCHHHHHHHHHhhcc
Q 015044 146 KVEDFSNEPVIERELMLIKVNADPKFCAEVSGDPGKVAAVQRNSST 191 (414)
Q Consensus 146 kV~dlt~~~~V~REL~LiKV~~~~~~r~EvTG~~~KIdafi~~L~~ 191 (414)
++.+.... .| +++ =++|...-+.++++..+.
T Consensus 88 ~l~~~~~~---~r-i~v-----------l~Sg~g~~l~~ll~~~~~ 118 (292)
T 3lou_A 88 AIHDVAAR---PK-VLI-----------MVSKLEHCLADLLFRWKM 118 (292)
T ss_dssp EEEETTSC---CE-EEE-----------EECSCCHHHHHHHHHHHH
T ss_pred EeeccCCC---CE-EEE-----------EEcCCCcCHHHHHHHHHc
Confidence 44443221 11 111 357777788888876543
No 31
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=96.40 E-value=0.006 Score=51.93 Aligned_cols=33 Identities=12% Similarity=0.168 Sum_probs=29.4
Q ss_pred EEEEEeCchhHHHHHHHHHhccCcceeeEEeee
Q 015044 81 ISVFVRDESGVVDLIDEVFARRGYNIESLAVSG 113 (414)
Q Consensus 81 LSVlVeN~pGVLsRItgLFsRRGyNIeSLtVg~ 113 (414)
+.+-+.|+||+|++|+.+|+..|+||+++....
T Consensus 75 v~v~~~d~pGvla~i~~~L~~~~InI~~~~~~~ 107 (144)
T 2f06_A 75 VGISCPNVPGALAKVLGFLSAEGVFIEYMYSFA 107 (144)
T ss_dssp EEEEEESSTTHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred EEEEeCCCCcHHHHHHHHHHHCCCCEEEEEEEc
Confidence 667889999999999999999999998876654
No 32
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=96.36 E-value=0.0064 Score=59.04 Aligned_cols=96 Identities=8% Similarity=0.091 Sum_probs=65.0
Q ss_pred EEEEEeCchhHHHHHHHHHhccCcceeeEEeeecCCCcE--EEEEEeCch-hHHHHHHHHHhcC---ccE-EEEEecCCc
Q 015044 81 ISVFVRDESGVVDLIDEVFARRGYNIESLAVSGNKDKGL--FTIVVSGTD-RVLQQVIEQLQKL---VNV-LKVEDFSNE 153 (414)
Q Consensus 81 LSVlVeN~pGVLsRItgLFsRRGyNIeSLtVg~Ted~~i--iTIVV~gde-~~veQl~kQL~KL---idV-ikV~dlt~~ 153 (414)
|++...|+||..++||+.|+.+|.||..++.......+. |++.++.++ ...+++.+.++.+ .++ +++.+....
T Consensus 11 Ltv~c~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~~~~~~L~~~f~~la~~l~m~~~l~~~~~~ 90 (286)
T 3n0v_A 11 LTADCPSMLGTVDVVTRYLFEQRCYVTEHHSFDDRQSGRFFIRVEFRQPDDFDEAGFRAGLAERSEAFGMAFELTAPNHR 90 (286)
T ss_dssp EEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEECCSSCCHHHHHHHHHHHHGGGTCEEEEECTTCC
T ss_pred EEEEeCCCCCHHHHHHHHHHHCCCCeeeeeeeccCCCCeeEEEEEEecCCCCCHHHHHHHHHHHHHHcCCEEEeecCCCC
Confidence 999999999999999999999999999999875555565 677776432 3466666655432 222 334432221
Q ss_pred hhhheeeeEEEEecCccccccccCCHHHHHHHHHhhcc
Q 015044 154 PVIERELMLIKVNADPKFCAEVSGDPGKVAAVQRNSST 191 (414)
Q Consensus 154 ~~V~REL~LiKV~~~~~~r~EvTG~~~KIdafi~~L~~ 191 (414)
.| +++ =++|.-.-+.++++..+.
T Consensus 91 ---~r-i~v-----------l~Sg~g~~l~~ll~~~~~ 113 (286)
T 3n0v_A 91 ---PK-VVI-----------MVSKADHCLNDLLYRQRI 113 (286)
T ss_dssp ---CE-EEE-----------EESSCCHHHHHHHHHHHT
T ss_pred ---cE-EEE-----------EEeCCCCCHHHHHHHHHC
Confidence 01 111 467888888888886543
No 33
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=96.29 E-value=0.0052 Score=63.69 Aligned_cols=68 Identities=18% Similarity=0.280 Sum_probs=53.6
Q ss_pred EEEEEeCchhHHHHHHHHHhccCcceeeEEeeecCCCc--EEEEEEeCchhHHHHHHHHHhcCccEEEEEec
Q 015044 81 ISVFVRDESGVVDLIDEVFARRGYNIESLAVSGNKDKG--LFTIVVSGTDRVLQQVIEQLQKLVNVLKVEDF 150 (414)
Q Consensus 81 LSVlVeN~pGVLsRItgLFsRRGyNIeSLtVg~Ted~~--iiTIVV~gde~~veQl~kQL~KLidVikV~dl 150 (414)
|-+...|+||++.+|+.++...|+||..+.++..+..+ +|.|.++.. .-+.+.++|.++-+|.+|..+
T Consensus 457 l~v~~~D~PG~I~~v~~~Lg~~~INIa~m~v~r~~~~~~a~~~i~vd~~--~~~~~l~~l~~~~~i~~v~~v 526 (529)
T 1ygy_A 457 LIIHYVDRPGALGKIGTLLGTAGVNIQAAQLSEDAEGPGATILLRLDQD--VPDDVRTAIAAAVDAYKLEVV 526 (529)
T ss_dssp EEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEECSSSSCEEEEEEESSC--CCHHHHHHHHHHHTEEEEEEE
T ss_pred EEEEcCCCCchHHHHHHHHHhcCCCeeeEEEecCCCCCEEEEEEEECCC--CCHHHHHHHhcCCCccEEEEE
Confidence 88889999999999999999999999999999876554 577777642 335566666677777766544
No 34
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=96.28 E-value=0.0086 Score=54.13 Aligned_cols=110 Identities=18% Similarity=0.168 Sum_probs=71.2
Q ss_pred EEEEEeCchhHHHHHHHHHhccCcceeeEEeeecCCCcE-EEEEEeCchh----HHHHHHHHHhcCccEEEEEecCCch-
Q 015044 81 ISVFVRDESGVVDLIDEVFARRGYNIESLAVSGNKDKGL-FTIVVSGTDR----VLQQVIEQLQKLVNVLKVEDFSNEP- 154 (414)
Q Consensus 81 LSVlVeN~pGVLsRItgLFsRRGyNIeSLtVg~Ted~~i-iTIVV~gde~----~veQl~kQL~KLidVikV~dlt~~~- 154 (414)
|.|...|+||++++|++.|+++|.||.......+. .++ |++.+..++. ..++|.+.|..+..=..+.. .-..
T Consensus 8 ltv~~~DrpGiva~vs~~La~~g~NI~da~q~~~~-~~f~m~~~v~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~~~~~ 85 (195)
T 2nyi_A 8 VSVAGSDRVGIVHDFSWALKNISANVESSRMACLG-GDFAMIVLVSLNAKDGKLIQSALESALPGFQISTRRAS-SVAER 85 (195)
T ss_dssp EEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEET-TEEEEEEEEEESSSSSHHHHHHHHHHSTTCEEEEEECC-CC---
T ss_pred EEEEeCCCCcHHHHHHHHHHHCCCCEEEEEeEEEC-CeEEEEEEEEecCccchhHHHHHHHHHHHHHHhcCCeE-EEEeC
Confidence 99999999999999999999999999999888644 233 6666653322 37888888876653222111 1000
Q ss_pred --hhheeeeEEEEecCccccccccCCHHHHHHHHHhhccCC--cEEEecc
Q 015044 155 --VIERELMLIKVNADPKFCAEVSGDPGKVAAVQRNSSTVG--ILEIART 200 (414)
Q Consensus 155 --~V~REL~LiKV~~~~~~r~EvTG~~~KIdafi~~L~~fG--IlEiaRT 200 (414)
.-..+..++.|.+ -..++=+.++-+.|..+| |.++-++
T Consensus 86 ~~~~~~~~~iltv~g--------~DrpGiva~Vt~~La~~g~nI~~~~~~ 127 (195)
T 2nyi_A 86 HVSPDTREYELYVEG--------PDSEGIVEAVTAVLAKKGANIVELETE 127 (195)
T ss_dssp -CCTTEEEEEEEEEE--------ECCTTHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CcCCCCcEEEEEEEe--------CCCcCHHHHHHHHHHHcCCCEEEceee
Confidence 1112233333333 235778888888888888 4555443
No 35
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=96.28 E-value=0.0081 Score=61.70 Aligned_cols=64 Identities=14% Similarity=0.254 Sum_probs=49.8
Q ss_pred EEEEEeCchhHHHHHHHHHhccCcceeeEEeeecC-CC-c-EEEEEEe-CchhHHHHHHHHHhcCccE
Q 015044 81 ISVFVRDESGVVDLIDEVFARRGYNIESLAVSGNK-DK-G-LFTIVVS-GTDRVLQQVIEQLQKLVNV 144 (414)
Q Consensus 81 LSVlVeN~pGVLsRItgLFsRRGyNIeSLtVg~Te-d~-~-iiTIVV~-gde~~veQl~kQL~KLidV 144 (414)
|.+.++|+||||.+|+++|++.|++|+|+.-.+.. +. . -+.|++. ..|..+++.+++|++|-.|
T Consensus 362 ~r~~~~d~~gvl~~i~~~~~~~~isi~~~~q~~~~~~~~~~~~v~~th~~~e~~~~~~~~~~~~~~~v 429 (444)
T 3mtj_A 362 LRLRAFDRPGVLADITRILADSSISIDAMVQKEPAEGEEQVDIILLTHVTLEKNVNAAIAKIEALDAV 429 (444)
T ss_dssp EEEEEC-CCHHHHHHHHHHHHTTCCEEEEEECC------CEEEEEEECSEEHHHHHHHHHHHTTSTTB
T ss_pred EEEEecCcccHHHHHHHHHHhcCCceeEEeecccccCCCCceEEEEeccCCHHHHHHHHHHHhcCCcc
Confidence 99999999999999999999999999999876543 12 2 2444553 5788999999999998655
No 36
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=96.26 E-value=0.0077 Score=58.52 Aligned_cols=97 Identities=15% Similarity=0.206 Sum_probs=67.6
Q ss_pred EEEEEeCchhHHHHHHHHHhccCcceeeEEeeecCCCcE--EEEEEeCch--hHHHHHHHHHhcCcc----EEEEEecCC
Q 015044 81 ISVFVRDESGVVDLIDEVFARRGYNIESLAVSGNKDKGL--FTIVVSGTD--RVLQQVIEQLQKLVN----VLKVEDFSN 152 (414)
Q Consensus 81 LSVlVeN~pGVLsRItgLFsRRGyNIeSLtVg~Ted~~i--iTIVV~gde--~~veQl~kQL~KLid----VikV~dlt~ 152 (414)
|++...|+||..++||+.|+.+|.||..+....+...+. |++.++.++ ...+++.+.++.+-+ -+++.+...
T Consensus 9 Ltv~g~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~~~~~~~L~~~f~~la~~~~m~~~l~~~~~ 88 (288)
T 3obi_A 9 LTLSCPDRAGIVSAVSTFLFENGQNILDAQQYNDTESGHFFMRVVFNAAAKVIPLASLRTGFGVIAAKFTMGWHMRDRET 88 (288)
T ss_dssp EEEEEECCTTHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEESSCCCCHHHHHHHHHHHHHHTTCEEEEEETTS
T ss_pred EEEECCCCCCHHHHHHHHHHHCCCcEEeeeeeecCCCCceEEEEEEEcCCCCCCHHHHHHHHHHHHHHcCCEEEeeccCC
Confidence 999999999999999999999999999999876566665 666665433 356777766644321 244443322
Q ss_pred chhhheeeeEEEEecCccccccccCCHHHHHHHHHhhccC
Q 015044 153 EPVIERELMLIKVNADPKFCAEVSGDPGKVAAVQRNSSTV 192 (414)
Q Consensus 153 ~~~V~REL~LiKV~~~~~~r~EvTG~~~KIdafi~~L~~f 192 (414)
. .| +++ =++|.-..+.++++..+.-
T Consensus 89 ~---~r-i~v-----------l~Sg~g~nl~~ll~~~~~g 113 (288)
T 3obi_A 89 R---RK-VML-----------LVSQSDHCLADILYRWRVG 113 (288)
T ss_dssp C---EE-EEE-----------EECSCCHHHHHHHHHHHTT
T ss_pred C---cE-EEE-----------EEcCCCCCHHHHHHHHHCC
Confidence 1 11 111 4688888999999887643
No 37
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=96.17 E-value=0.0083 Score=58.28 Aligned_cols=96 Identities=14% Similarity=0.140 Sum_probs=65.0
Q ss_pred EEEEEeCchhHHHHHHHHHhccCcceeeEEeeecCCCcE--EEEEEeCchhHHHHHHHHHhcC---cc-EEEEEecCCch
Q 015044 81 ISVFVRDESGVVDLIDEVFARRGYNIESLAVSGNKDKGL--FTIVVSGTDRVLQQVIEQLQKL---VN-VLKVEDFSNEP 154 (414)
Q Consensus 81 LSVlVeN~pGVLsRItgLFsRRGyNIeSLtVg~Ted~~i--iTIVV~gde~~veQl~kQL~KL---id-VikV~dlt~~~ 154 (414)
|++...|+||..++||+.++++|.||..+....+...+. |++.++.+....+++.+.++.+ .+ -+++.+....
T Consensus 10 Ltv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~~~~~L~~~f~~la~~~~m~~~l~~~~~~- 88 (287)
T 3nrb_A 10 LSLACQDAPGIVSEVSTFLFNNGANIVEAEQFNDEDSSKFFMRVSVEIPVAGVNDFNSAFGKVVEKYNAEWWFRPRTDR- 88 (287)
T ss_dssp EEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEECCC---CHHHHHHHHHHGGGTCEEEEEETTCC-
T ss_pred EEEECCCCCCHHHHHHHHHHHCCCCEEeeeeeecCCCCeEEEEEEEEcCCCCHHHHHHHHHHHHHHcCCeeEeeccCCC-
Confidence 999999999999999999999999999999876666676 6777765443345666555432 12 2444433221
Q ss_pred hhheeeeEEEEecCccccccccCCHHHHHHHHHhhcc
Q 015044 155 VIERELMLIKVNADPKFCAEVSGDPGKVAAVQRNSST 191 (414)
Q Consensus 155 ~V~REL~LiKV~~~~~~r~EvTG~~~KIdafi~~L~~ 191 (414)
.| +++ =++|.-..+.++++..+.
T Consensus 89 --~r-i~v-----------l~Sg~g~nl~~ll~~~~~ 111 (287)
T 3nrb_A 89 --KK-VVI-----------MVSKFDHCLGDLLYRHRL 111 (287)
T ss_dssp --CE-EEE-----------EECSCCHHHHHHHHHHHH
T ss_pred --cE-EEE-----------EEeCCCcCHHHHHHHHHC
Confidence 12 111 467888888888887654
No 38
>3s1t_A Aspartokinase; ACT domain, threonine binding, regulatory domain of aspartok transferase; 1.63A {Mycobacterium tuberculosis}
Probab=96.15 E-value=0.022 Score=51.36 Aligned_cols=105 Identities=18% Similarity=0.216 Sum_probs=69.5
Q ss_pred EEeCchhHHHHHHHHHhccCcceeeEEeeecC-CCcE--EEEEEeCchhHHHHHHHHHhcCc---cEEEEEecCCchhhh
Q 015044 84 FVRDESGVVDLIDEVFARRGYNIESLAVSGNK-DKGL--FTIVVSGTDRVLQQVIEQLQKLV---NVLKVEDFSNEPVIE 157 (414)
Q Consensus 84 lVeN~pGVLsRItgLFsRRGyNIeSLtVg~Te-d~~i--iTIVV~gde~~veQl~kQL~KLi---dVikV~dlt~~~~V~ 157 (414)
-+.|+||.+.||...|++.|+||+.++.+.++ +.+. ++++++.++ .++..+.|+++. ...+| .++
T Consensus 23 ~~~~~~G~~a~If~~La~~~I~vd~I~q~~s~~~~g~~~isftv~~~~--~~~a~~~L~~~~~el~~~~v-------~~~ 93 (181)
T 3s1t_A 23 GLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCSRDV--GPAAVEKLDSLRNEIGFSQL-------LYD 93 (181)
T ss_dssp EEESSTTHHHHHHHHHHHTTCCCCCEEECCCCTTTCEEEEEEEEETTT--HHHHHHHHHHTHHHHCCSEE-------EEE
T ss_pred cCCCCcCHHHHHHHHHHHcCCcEEEEEecCCcccCCccEEEEEEehhH--HHHHHHHHHHHHHhcCcceE-------EEe
Confidence 36899999999999999999999999877665 3454 788887544 223333333331 11111 223
Q ss_pred eeeeEEEEecCccccccccCCHHHHHHHHHhhccCCc--EEEecccce
Q 015044 158 RELMLIKVNADPKFCAEVSGDPGKVAAVQRNSSTVGI--LEIARTGKT 203 (414)
Q Consensus 158 REL~LiKV~~~~~~r~EvTG~~~KIdafi~~L~~fGI--lEiaRTG~i 203 (414)
+.+++|-|--. .+.+.|+-...+.+.|..-|| .-+. |.-+
T Consensus 94 ~~va~VsvVG~-----gm~~~~Gvaa~~f~aLa~~~InI~~Is-tSei 135 (181)
T 3s1t_A 94 DHIGKVSLIGA-----GMRSHPGVTATFCEALAAVGVNIELIS-TSEI 135 (181)
T ss_dssp SCEEEEEEEEE-----CCTTCHHHHHHHHHHHHHTTCCCCEEE-EETT
T ss_pred CCEEEEEEEec-----ccccCchHHHHHHHHHHHCCCcEEEEE-cCCC
Confidence 45566554322 577889999999999997775 4555 4443
No 39
>2dtj_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; HET: CIT; 1.58A {Corynebacterium glutamicum} PDB: 3aaw_B* 3ab2_B 3ab4_B*
Probab=96.08 E-value=0.019 Score=51.26 Aligned_cols=107 Identities=17% Similarity=0.213 Sum_probs=71.1
Q ss_pred EEE-EEeCchhHHHHHHHHHhccCcceeeEEeeecC--CCc-EEEEEEeCchhHHHHHHHHHhcCccEEEEEecCCchhh
Q 015044 81 ISV-FVRDESGVVDLIDEVFARRGYNIESLAVSGNK--DKG-LFTIVVSGTDRVLQQVIEQLQKLVNVLKVEDFSNEPVI 156 (414)
Q Consensus 81 LSV-lVeN~pGVLsRItgLFsRRGyNIeSLtVg~Te--d~~-iiTIVV~gde~~veQl~kQL~KLidVikV~dlt~~~~V 156 (414)
|++ .+.|+||.+.+|...|++.|+||+-++.+... +.+ -+++++..++ .++..+.|+++..=+.. ..=.+
T Consensus 18 Itv~~~~~~~G~~a~if~~La~~~InId~i~~s~~~~~~~~~~isf~v~~~d--~~~a~~~l~~~~~~~~~----~~v~~ 91 (178)
T 2dtj_A 18 VTVLGISDKPGEAAKVFRALADAEINIDMVLQNVSSVEDGTTDITFTCPRSD--GRRAMEILKKLQVQGNW----TNVLY 91 (178)
T ss_dssp EEEEEEECSTTHHHHHHHHHHHTTCCCCEEEECCCCTTTCEEEEEEEEEHHH--HHHHHHHHHTTTTTTTC----SEEEE
T ss_pred EEEecCCCCccHHHHHHHHHHHcCCCEEEEEcCCCCCCCCceEEEEEEcccc--HHHHHHHHHHHHHhcCC----CeEEE
Confidence 777 57999999999999999999999999876432 322 2666666433 24444445443211100 01134
Q ss_pred heeeeEEEEecCccccccccCCHHHHHHHHHhhccCCc-EEEe
Q 015044 157 ERELMLIKVNADPKFCAEVSGDPGKVAAVQRNSSTVGI-LEIA 198 (414)
Q Consensus 157 ~REL~LiKV~~~~~~r~EvTG~~~KIdafi~~L~~fGI-lEia 198 (414)
.+++++|-|-.. .+.+.++-...+++.|...|| +++.
T Consensus 92 ~~~~a~VsvVG~-----gm~~~~Gv~arif~aLa~~~InI~~i 129 (178)
T 2dtj_A 92 DDQVGKVSLVGA-----GMKSHPGVTAEFMEALRDVNVNIELI 129 (178)
T ss_dssp ESCEEEEEEEEE-----CCTTCHHHHHHHHHHHHHTTCCCCEE
T ss_pred eCCeEEEEEEcC-----CcccCccHHHHHHHHHHHCCCCEEEE
Confidence 466777766543 677899999999999999876 4443
No 40
>2qmx_A Prephenate dehydratase; APC86053, L-Phe inhibition, PDT, CHL tepidum TLS, structural genomics, PSI-2, protein structure initiative; HET: PHE; 2.30A {Chlorobium tepidum tls}
Probab=95.15 E-value=0.09 Score=51.10 Aligned_cols=67 Identities=22% Similarity=0.344 Sum_probs=54.4
Q ss_pred EEEEEeCchhHHHHHHHHHhccCcceeeEEeeecCCC-c-E-EEEEEeC--chhHHHHHHHHHhcCccEEEE
Q 015044 81 ISVFVRDESGVVDLIDEVFARRGYNIESLAVSGNKDK-G-L-FTIVVSG--TDRVLQQVIEQLQKLVNVLKV 147 (414)
Q Consensus 81 LSVlVeN~pGVLsRItgLFsRRGyNIeSLtVg~Ted~-~-i-iTIVV~g--de~~veQl~kQL~KLidVikV 147 (414)
|.+.+.|+||.|.++.+.|++||+|+..|---++... + + |-|-++| ++..+++..+.|++...-+++
T Consensus 203 l~f~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfvD~eg~~~d~~v~~aL~~L~~~~~~~ki 274 (283)
T 2qmx_A 203 IVFALPNEQGSLFRALATFALRGIDLTKIESRPSRKKAFEYLFYADFIGHREDQNVHNALENLREFATMVKV 274 (283)
T ss_dssp EEEEEECCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTEEEEEEEEESCTTSHHHHHHHHHHHTTCSEEEE
T ss_pred EEEEcCCCCchHHHHHHHHHHcCCCeeEEEeeEcCCCCcceEEEEEEecCCCcHHHHHHHHHHHHhcCeEEE
Confidence 8888899999999999999999999999999888754 3 3 5666765 456788899999887655544
No 41
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=95.07 E-value=0.13 Score=51.83 Aligned_cols=102 Identities=17% Similarity=0.256 Sum_probs=70.1
Q ss_pred EEEE-EeCchhHHHHHHHHHhccCcceeeEEeeecC-CCc--EEEEEEeCch-hHHHHHHHHHhcCccEEEEEecCCchh
Q 015044 81 ISVF-VRDESGVVDLIDEVFARRGYNIESLAVSGNK-DKG--LFTIVVSGTD-RVLQQVIEQLQKLVNVLKVEDFSNEPV 155 (414)
Q Consensus 81 LSVl-VeN~pGVLsRItgLFsRRGyNIeSLtVg~Te-d~~--iiTIVV~gde-~~veQl~kQL~KLidVikV~dlt~~~~ 155 (414)
|+++ +.|+||.+.||...|++.|+||+-++...++ +.+ .++++|+.++ +...++.+++.+-+.. ..-.
T Consensus 267 i~v~~~~~~~g~~~~If~~La~~~I~vd~I~q~~s~~~~g~~~isf~v~~~~~~~a~~~l~~~~~~~~~-------~~v~ 339 (421)
T 3ab4_A 267 VTVLGISDKPGEAAKVFRALADAEINIDMVLQNVFSVEDGTTDITFTCPRSDGRRAMEILKKLQVQGNW-------TNVL 339 (421)
T ss_dssp EEEEEEESSTTHHHHHHHHHHHTTCCCEEEEECCCC--CCEEEEEEEEETTTHHHHHHHHHHHHTTTTC-------SEEE
T ss_pred EEEeccCCcccHHHHHHHHHHHcCCcEEEEEccCccccCCcceEEEEEechhHHHHHHHHHHHHHHcCC-------ceEE
Confidence 7777 7999999999999999999999999763333 134 4888887543 3344444444333331 1122
Q ss_pred hheeeeEEEEecCccccccccCCHHHHHHHHHhhccCCc
Q 015044 156 IERELMLIKVNADPKFCAEVSGDPGKVAAVQRNSSTVGI 194 (414)
Q Consensus 156 V~REL~LiKV~~~~~~r~EvTG~~~KIdafi~~L~~fGI 194 (414)
+++.++++-|-.. .+.+.++-...+++.|.+.||
T Consensus 340 ~~~~~a~vsvVG~-----gm~~~~Gv~a~~f~aL~~~~I 373 (421)
T 3ab4_A 340 YDDQVGKVSLVGA-----GMKSHPGVTAEFMEALRDVNV 373 (421)
T ss_dssp EECCEEEEEEECG-----GGTSCTTHHHHHHHHHHHTTC
T ss_pred EeCCeEEEEEEcc-----CcccCccHHHHHHHHHHHCCC
Confidence 3456777766544 567788888999999988775
No 42
>3mah_A Aspartokinase; aspartate kinase, structural genomics, MCSG, transferase, PSI-2; 2.31A {Porphyromonas gingivalis}
Probab=94.70 E-value=0.066 Score=46.60 Aligned_cols=98 Identities=15% Similarity=0.177 Sum_probs=64.3
Q ss_pred EEEE---EeCchhHHHHHHHHHhccCcceeeEEeeecCCCcEEEEEEeCchhHHHHHHHHHhcCccEEEEEecCCchhhh
Q 015044 81 ISVF---VRDESGVVDLIDEVFARRGYNIESLAVSGNKDKGLFTIVVSGTDRVLQQVIEQLQKLVNVLKVEDFSNEPVIE 157 (414)
Q Consensus 81 LSVl---VeN~pGVLsRItgLFsRRGyNIeSLtVg~Ted~~iiTIVV~gde~~veQl~kQL~KLidVikV~dlt~~~~V~ 157 (414)
|++. ..++||++.||...|++.|+||+.++.++ .-++++++..+ .++++.+.|.+. + .| .+.
T Consensus 21 Iti~~~~m~~~~g~~~~if~~La~~~I~vd~I~~s~----~~Isf~v~~~~-~~~~il~~l~~~-~--~v-------~~~ 85 (157)
T 3mah_A 21 IKVKSSNKLLSWHFMRKLFEIFEFYQEPVDMVATSE----VGVSLTIDNDK-NLPDIVRALSDI-G--DV-------TVD 85 (157)
T ss_dssp EEEEECTTSCHHHHHHHHHHHHHHTTCCCSCEECCS----SEEEEEESCCT-THHHHHHHHTTT-E--EE-------EEE
T ss_pred EEEEeCCCCCchhHHHHHHHHHHHcCCCEEEEEecC----CEEEEEECChH-HHHHHHHHHhcc-C--eE-------EEe
Confidence 5554 24789999999999999999999998653 25777777544 677777777762 1 11 234
Q ss_pred eeeeEEEEecCccccccccCCHHHHHHHHHhhccCCcEEEe
Q 015044 158 RELMLIKVNADPKFCAEVSGDPGKVAAVQRNSSTVGILEIA 198 (414)
Q Consensus 158 REL~LiKV~~~~~~r~EvTG~~~KIdafi~~L~~fGIlEia 198 (414)
+.+++|-|--. .+.+.++-...+++.|....|.-+.
T Consensus 86 ~~~a~vsvvG~-----gm~~~~gv~a~~f~aL~~Ini~~is 121 (157)
T 3mah_A 86 KDMVIICIVGD-----MEWDNVGFEARIINALKGVPVRMIS 121 (157)
T ss_dssp EEEEEEEEEC-----------CCHHHHHHHTTTTSCCSEEE
T ss_pred CCeEEEEEECC-----CcccCccHHHHHHHHhCCCCeEEEe
Confidence 56777765433 4556677778888888844444444
No 43
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=94.27 E-value=0.083 Score=51.90 Aligned_cols=102 Identities=20% Similarity=0.237 Sum_probs=65.8
Q ss_pred EEEEEeCchhHHHHHHHHHhccCcceeeEEeeecCCCcE--EEEEEeCchh--HHHHHHHHHhcC----ccEEEEEecCC
Q 015044 81 ISVFVRDESGVVDLIDEVFARRGYNIESLAVSGNKDKGL--FTIVVSGTDR--VLQQVIEQLQKL----VNVLKVEDFSN 152 (414)
Q Consensus 81 LSVlVeN~pGVLsRItgLFsRRGyNIeSLtVg~Ted~~i--iTIVV~gde~--~veQl~kQL~KL----idVikV~dlt~ 152 (414)
|++...|+||+.++|++.++++|.||..+.-.. ..+. |++.++.++. ..++|.+.|+.+ -=-+++.+.+.
T Consensus 15 lt~~g~Dr~Giv~~vs~~l~~~~~nI~d~~q~~--~~~~f~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 92 (415)
T 3p96_A 15 ITVTGVDQPGVTATLFEVLSRHGVELLNVEQVV--IRHRLTLGVLVCCPADVADGPALRHDVEAAIRKVGLDVSIERSDD 92 (415)
T ss_dssp EEEEEECCTTHHHHHHHHHTTTTCEEEEEEEEE--ETTEEEEEEEEEECHHHHTSHHHHHHHHHHHHHTTCEEEEEECSS
T ss_pred EEEEcCCCCCHHHHHHHHHHHCCCCEEEeeeEE--ECCEeEEEEEEEecCCcCCHHHHHHHHHHHHHHcCeEEEEEECCc
Confidence 999999999999999999999999999998864 3355 6666665554 346777766544 22355665554
Q ss_pred chhhhe-eeeEEEEecCccccccccC---CHHHHHHHHHhhccCCc
Q 015044 153 EPVIER-ELMLIKVNADPKFCAEVSG---DPGKVAAVQRNSSTVGI 194 (414)
Q Consensus 153 ~~~V~R-EL~LiKV~~~~~~r~EvTG---~~~KIdafi~~L~~fGI 194 (414)
...+.+ ...++ .+.| .++-+..+...+..+|+
T Consensus 93 ~~~~~~~~~~~~----------~llg~~~~~~~~~~i~~~l~~~~~ 128 (415)
T 3p96_A 93 VPIIREPSTHTI----------FVLGRPITAAAFGAVAREVAALGV 128 (415)
T ss_dssp SCSSCCCCSEEE----------EEEESSCCHHHHHHHHHHHHHTTC
T ss_pred ccccCCCCcEEE----------EEEeCCCCHHHHHHHHHHHHHcCC
Confidence 322211 11111 2222 35666677777766665
No 44
>2qmw_A PDT, prephenate dehydratase; APC85812, prephenate dehydratase (PDT), staphylococcus aureu aureus MU50, structural genomics, PSI-2; 2.30A {Staphylococcus aureus subsp} SCOP: c.94.1.1 d.58.18.3
Probab=94.06 E-value=0.12 Score=49.84 Aligned_cols=67 Identities=19% Similarity=0.301 Sum_probs=52.9
Q ss_pred EEEEE---eCchhHHHHHHHHHhccCcceeeEEeeecCCC-c-E-EEEEE-eCchhHHHHHHHHHhcCccEEEE
Q 015044 81 ISVFV---RDESGVVDLIDEVFARRGYNIESLAVSGNKDK-G-L-FTIVV-SGTDRVLQQVIEQLQKLVNVLKV 147 (414)
Q Consensus 81 LSVlV---eN~pGVLsRItgLFsRRGyNIeSLtVg~Ted~-~-i-iTIVV-~gde~~veQl~kQL~KLidVikV 147 (414)
|.+.+ .|+||.|.++.+.|+.||+|+..|---++... + + |-|-+ .-++..+.+..+.|++...-+++
T Consensus 189 l~f~~~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD~e~~~d~~v~~aL~~L~~~~~~~ki 262 (267)
T 2qmw_A 189 LMFLITPMHDKPGLLASVLNTFALFNINLSWIESRPLKTQLGMYRFFVQADSAITTDIKKVIAILETLDFKVEM 262 (267)
T ss_dssp EEEEEEESSCCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTCEEEEEEESCCSCHHHHHHHHHHHHTTEEEEE
T ss_pred EEEEcCCCCCCcChHHHHHHHHHHcCCCeeEEEEeecCCCCccEEEEEEEecCCcHHHHHHHHHHHHhcCeEEE
Confidence 88888 89999999999999999999999999887654 2 3 33333 45567788999998887655554
No 45
>3mwb_A Prephenate dehydratase; L-Phe, PSI, MCSG, structural genomics, midwest center for ST genomics, protein structure initiative, lyase; HET: MSE PHE; 2.00A {Arthrobacter aurescens}
Probab=93.27 E-value=0.2 Score=49.44 Aligned_cols=69 Identities=23% Similarity=0.351 Sum_probs=52.3
Q ss_pred EEEEE-eCchhHHHHHHHHHhccCcceeeEEeeecCCC--cE-EEEEEeC--chhHHHHHHHHHhcC---ccEEEEEe
Q 015044 81 ISVFV-RDESGVVDLIDEVFARRGYNIESLAVSGNKDK--GL-FTIVVSG--TDRVLQQVIEQLQKL---VNVLKVED 149 (414)
Q Consensus 81 LSVlV-eN~pGVLsRItgLFsRRGyNIeSLtVg~Ted~--~i-iTIVV~g--de~~veQl~kQL~KL---idVikV~d 149 (414)
|.+.+ +|+||.|.++.+.|+.||+|+..|---++... .+ |-|-++| ++..+.+..+.|++. +-|+-.+.
T Consensus 204 l~f~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD~eg~~~d~~v~~aL~~L~~~~~~~kiLGsYp 281 (313)
T 3mwb_A 204 VVVPLPEDHPGALMEILDQFASRGVNLSRIESRPTGQYLGHYFFSIDADGHATDSRVADALAGLHRISPATRFLGSYA 281 (313)
T ss_dssp EEEECSSCCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTSEEEEEEEESCTTSHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred EEEEeCCCCCCHHHHHHHHHHHCCccEEEEEEeecCCCCccEEEEEEEeCCCCcHHHHHHHHHHHHhcCcEEEEeeee
Confidence 77778 49999999999999999999999988887644 23 6666765 456788877777665 44444443
No 46
>4go7_X Aspartokinase; transferase; 2.00A {Mycobacterium tuberculosis} PDB: 4go5_X
Probab=93.24 E-value=0.16 Score=46.99 Aligned_cols=108 Identities=19% Similarity=0.277 Sum_probs=67.6
Q ss_pred EEE-EEeCchhHHHHHHHHHhccCcceeeEEeeecCCC-cE--EEEEEeCchhHHHHHHHHHhcCcc---EEEEEecCCc
Q 015044 81 ISV-FVRDESGVVDLIDEVFARRGYNIESLAVSGNKDK-GL--FTIVVSGTDRVLQQVIEQLQKLVN---VLKVEDFSNE 153 (414)
Q Consensus 81 LSV-lVeN~pGVLsRItgLFsRRGyNIeSLtVg~Ted~-~i--iTIVV~gde~~veQl~kQL~KLid---VikV~dlt~~ 153 (414)
|++ -+.|+||++.||-+.|++.|+||+-++.+.++.. +. ++.++..+ ..++..+.|+++.. ..+|
T Consensus 38 Iti~g~~~~pG~aa~IF~~La~~~InVDmI~Qs~s~~~~~~~~~sftv~~~--d~~~~~~~l~~~~~~~~~~~v------ 109 (200)
T 4go7_X 38 VTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCSRD--VGPAAVEKLDSLRNEIGFSQL------ 109 (200)
T ss_dssp EEEEEEECSTTHHHHHHHHHHHTTCCCCCEECCCCC--CCEEEEEEEEEGG--GHHHHHHHHHTTHHHHCCSEE------
T ss_pred EEEecCCCCccHHHHHHHHHHHhCcceEEEeeccccccccceEEEEecchh--hHHHHHHHHHHHHhhhceeeE------
Confidence 444 3789999999999999999999999988876532 33 56666543 33344444444332 1122
Q ss_pred hhhheeeeEEEEecCccccccccCCHHHHHHHHHhhccCCc-EEEecccc
Q 015044 154 PVIERELMLIKVNADPKFCAEVSGDPGKVAAVQRNSSTVGI-LEIARTGK 202 (414)
Q Consensus 154 ~~V~REL~LiKV~~~~~~r~EvTG~~~KIdafi~~L~~fGI-lEiaRTG~ 202 (414)
.++..++.|-|--. -+.+.|+=...|.+.|.+-|| +++.-|--
T Consensus 110 -~~~~~iakVSvVG~-----GM~~~~GVaak~F~aLa~~~INI~mIstSE 153 (200)
T 4go7_X 110 -LYDDHIGKVSLIGA-----GMRSHPGVTATFCEALAAVGVNIELISTSE 153 (200)
T ss_dssp -EEECCEEEEEEEEE-----SCTTCHHHHHHHHHHHHHTTCCCCEEEECS
T ss_pred -EEecCeeeeeeecc-----ccccCCCcHHHHHHHHHHCCCCEEEEEccC
Confidence 13334444433222 567889989999999988775 44433443
No 47
>3luy_A Probable chorismate mutase; structural genomics, APC38059, 3-phenylp PSI-2, protein structure initiative; HET: PPY; 2.00A {Bifidobacterium adolescentis}
Probab=92.04 E-value=0.53 Score=46.70 Aligned_cols=67 Identities=15% Similarity=0.282 Sum_probs=50.0
Q ss_pred EEEEEe--CchhHHHHHHHHHhccCcceeeEEeeecCCCc--E-EEEEEeC--chhHHHHHHHHHhcCccEEEE
Q 015044 81 ISVFVR--DESGVVDLIDEVFARRGYNIESLAVSGNKDKG--L-FTIVVSG--TDRVLQQVIEQLQKLVNVLKV 147 (414)
Q Consensus 81 LSVlVe--N~pGVLsRItgLFsRRGyNIeSLtVg~Ted~~--i-iTIVV~g--de~~veQl~kQL~KLidVikV 147 (414)
+.+++. |+||.|.++.+.|++||+|+..|---++...- + |=|-++| +|..+.+..+.|++...-+++
T Consensus 209 ~i~~~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD~eg~~~d~~v~~AL~~L~~~~~~~ki 282 (329)
T 3luy_A 209 VLTLIPLVTGPGVLANLLDVFRDAGLNMTSFISRPIKGRTGTYSFIVTLDAAPWEERFRDALVEIAEHGDWAKT 282 (329)
T ss_dssp EEEEECSCCSTTHHHHHHHHHHHTTCCEEEEEEEEETTEEEEEEEEEEESSCTTSHHHHHHHHHHHHTTCEEEE
T ss_pred EEEEecCCCCCCHHHHHHHHHHHCCcceEEEEeeECCCCCccEEEEEEEeCCcCCHHHHHHHHHHHHhCCeEEE
Confidence 444443 79999999999999999999999988877542 2 5566766 356788888888777544433
No 48
>1phz_A Protein (phenylalanine hydroxylase); aromatic amino acid hydroxylase, phosphorylation, intrasteric regulation, allosteric regulation; 2.20A {Rattus norvegicus} SCOP: d.58.18.3 d.178.1.1 PDB: 2phm_A
Probab=90.55 E-value=0.32 Score=50.06 Aligned_cols=69 Identities=14% Similarity=0.231 Sum_probs=52.7
Q ss_pred EEEEEeCchhHHHHHHHHHhccCcceeeEEeeecCCC-c-E-EEEEE-eCchhHHHHHHHHHhcC-ccEEEEEe
Q 015044 81 ISVFVRDESGVVDLIDEVFARRGYNIESLAVSGNKDK-G-L-FTIVV-SGTDRVLQQVIEQLQKL-VNVLKVED 149 (414)
Q Consensus 81 LSVlVeN~pGVLsRItgLFsRRGyNIeSLtVg~Ted~-~-i-iTIVV-~gde~~veQl~kQL~KL-idVikV~d 149 (414)
|.+.+.|+||.|.++.+.|+.||+|+..|---++... + + +-|-+ .-++..+.++.+.|.+. ..-++|--
T Consensus 37 LiFsl~n~pGAL~~~L~~Fa~~gINLTkIESRPsk~~~~eY~FfVD~eh~~d~~v~~AL~eL~~~~~~~vkiLG 110 (429)
T 1phz_A 37 LIFSLKEEVGALAKVLRLFEENDINLTHIESRPSRLNKDEYEFFTYLDKRTKPVLGSIIKSLRNDIGATVHELS 110 (429)
T ss_dssp EEEEEECCTTHHHHHHHHHHTTTCCTTSEEEEECSSCTTEEEEEECBCGGGHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred EEEEeCCCccHHHHHHHHHHHcCCceEEEEeeecCCCCccEEEEEEEeeCCCHHHHHHHHHHHhhccceEEECC
Confidence 8888899999999999999999999999998887644 3 2 33323 33455588889999888 66555543
No 49
>3c1m_A Probable aspartokinase; allosteric inhibition, threonine-sensitive, ACT DOMA amino-acid biosynthesis, threonine biosynthesis; HET: ANP; 2.30A {Methanocaldococcus jannaschii} PDB: 3c1n_A 3c20_A 2hmf_A*
Probab=89.92 E-value=1.3 Score=45.19 Aligned_cols=100 Identities=17% Similarity=0.274 Sum_probs=65.9
Q ss_pred EEEE---EeCchhHHHHHHHHHhccCcceeeEEeeecCCCcEEEEEEeCch--hHHHHHHHHH--------hcCccEEEE
Q 015044 81 ISVF---VRDESGVVDLIDEVFARRGYNIESLAVSGNKDKGLFTIVVSGTD--RVLQQVIEQL--------QKLVNVLKV 147 (414)
Q Consensus 81 LSVl---VeN~pGVLsRItgLFsRRGyNIeSLtVg~Ted~~iiTIVV~gde--~~veQl~kQL--------~KLidVikV 147 (414)
|++. ..|+||++.||...|++.|+||+-++.+.++. -++++|+.++ +.++.|.+.+ ++-+..-.
T Consensus 321 Isv~g~~m~~~~G~~a~if~~La~~~InV~~IsQ~tse~--~Is~~V~~~d~~~a~~~L~~~l~~~~~~~~~~~~~~~~- 397 (473)
T 3c1m_A 321 INIFGAGMVGVSGTAARIFKALGEEEVNVILISQGSSET--NISLVVSEEDVDKALKALKREFGDFGKKSFLNNNLIRD- 397 (473)
T ss_dssp EEEEECSSSCHHHHHHHHHHHHHHTTCCEEEEEECCTTC--CEEEEEEGGGHHHHHHHHHHHHCC----CTTSCCCEEE-
T ss_pred EEEecCCCCCCcCHHHHHHHHHHHcCCcEEEEEecCCCC--EEEEEEechHHHHHHHHHHHHHhhhcccccccccccce-
Confidence 6776 47899999999999999999999999755442 4777877533 3344444444 22110111
Q ss_pred EecCCchhhheeeeEEEEecCccccccccCCHHHHHHHHHhhccCCc
Q 015044 148 EDFSNEPVIERELMLIKVNADPKFCAEVSGDPGKVAAVQRNSSTVGI 194 (414)
Q Consensus 148 ~dlt~~~~V~REL~LiKV~~~~~~r~EvTG~~~KIdafi~~L~~fGI 194 (414)
-.+++.++++-|--. .+.+.++-...+++.|.+-||
T Consensus 398 ------v~~~~~~a~vsvVG~-----gm~~~~Gvaak~f~aL~~~~I 433 (473)
T 3c1m_A 398 ------VSVDKDVCVISVVGA-----GMRGAKGIAGKIFTAVSESGA 433 (473)
T ss_dssp ------EEEEEEEEEEEEECT-----TTTTCTTHHHHHHHHHHHHTC
T ss_pred ------EEEeCCcEEEEEEec-----CCCCChhHHHHHHHHHHHCCC
Confidence 122355666655443 567788888899999987554
No 50
>3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum}
Probab=88.73 E-value=1.2 Score=45.50 Aligned_cols=98 Identities=14% Similarity=0.205 Sum_probs=69.4
Q ss_pred eCchhHHHHHHHHHhccCcceeeEEeeecCCCcEEEEEEeCchh--HHHHHHHHHhcCccEEEEEecCCchhhheeeeEE
Q 015044 86 RDESGVVDLIDEVFARRGYNIESLAVSGNKDKGLFTIVVSGTDR--VLQQVIEQLQKLVNVLKVEDFSNEPVIERELMLI 163 (414)
Q Consensus 86 eN~pGVLsRItgLFsRRGyNIeSLtVg~Ted~~iiTIVV~gde~--~veQl~kQL~KLidVikV~dlt~~~~V~REL~Li 163 (414)
.++||++.||...|++.|+||+.++.++ .-++++++.++. ..+++.+.|.+..+.-+ -.+++.+++|
T Consensus 309 ~~~~g~~~~if~~l~~~~i~vd~i~~~~----~~is~~V~~~d~~~~~~~~~~el~~~~~~~~-------v~v~~~vA~V 377 (446)
T 3tvi_A 309 NSEVGFCRKILSILEMYGVSFEHMPSGV----DSVSLVIEDCKLDGKCDKIIEEIKKQCNPDS-------IEIHPNMALV 377 (446)
T ss_dssp GGSTTHHHHHHHHHHTTTCCEEEBCEET----TEEEEEEEHHHHTTTHHHHHHHHHHHSCCSE-------EEEEEEEEEE
T ss_pred CccHHHHHHHHHHHHHcCCcEEEEecCC----CEEEEEEecchHHHHHHHHHHHHHHhcCCCc-------EEEeCCeEEE
Confidence 5799999999999999999999987542 347777775442 46777777776543222 2345567776
Q ss_pred EEecCccccccccCCHHHHHHHHHhhccCCc-EEEec
Q 015044 164 KVNADPKFCAEVSGDPGKVAAVQRNSSTVGI-LEIAR 199 (414)
Q Consensus 164 KV~~~~~~r~EvTG~~~KIdafi~~L~~fGI-lEiaR 199 (414)
-|--. .+.+.++-...+.+.|..-|| ++++-
T Consensus 378 SvVG~-----gM~~~~Gvaarif~aLa~~~InI~mIs 409 (446)
T 3tvi_A 378 ATVGT-----GMAKTKGIANKIFTALSKENVNIRMID 409 (446)
T ss_dssp EEECG-----GGSSCTTHHHHHHHHHHHTTCCEEEEE
T ss_pred EEECC-----CccCChhHHHHHHHHHHHCCCCEEEEE
Confidence 55433 566788888899999998886 55544
No 51
>2dtj_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; HET: CIT; 1.58A {Corynebacterium glutamicum} PDB: 3aaw_B* 3ab2_B 3ab4_B*
Probab=88.46 E-value=0.94 Score=40.15 Aligned_cols=53 Identities=17% Similarity=0.221 Sum_probs=37.5
Q ss_pred EEEEEe---CchhHHHHHHHHHhccCcceeeEEeeecCCCcEEEEEEeCchhHHHHHHHHHh
Q 015044 81 ISVFVR---DESGVVDLIDEVFARRGYNIESLAVSGNKDKGLFTIVVSGTDRVLQQVIEQLQ 139 (414)
Q Consensus 81 LSVlVe---N~pGVLsRItgLFsRRGyNIeSLtVg~Ted~~iiTIVV~gde~~veQl~kQL~ 139 (414)
|++.-. ++||+++|+...|++.|+||+-++ .+| --+.++|+. +..++..+.|.
T Consensus 98 VsvVG~gm~~~~Gv~arif~aLa~~~InI~~is--tSe--~~Is~vV~~--~d~~~Av~~Lh 153 (178)
T 2dtj_A 98 VSLVGAGMKSHPGVTAEFMEALRDVNVNIELIS--TSE--IRISVLIRE--DDLDAAARALH 153 (178)
T ss_dssp EEEEEECCTTCHHHHHHHHHHHHHTTCCCCEEE--EET--TEEEEEEEG--GGHHHHHHHHH
T ss_pred EEEEcCCcccCccHHHHHHHHHHHCCCCEEEEE--cCC--CeEEEEEeH--HHHHHHHHHHH
Confidence 677766 899999999999999999999986 222 335666653 33444444444
No 52
>2nzc_A Hypothetical protein; sturctural genomics, TM1266, structural genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.95A {Thermotoga maritima} SCOP: d.58.18.14
Probab=88.31 E-value=1.8 Score=35.43 Aligned_cols=66 Identities=11% Similarity=0.182 Sum_probs=54.9
Q ss_pred EEEEEeCchhHHHHHHHHHhccCcceeeEEeeecCCC--cEEEEEEeCchhHHHHHHHHHhcCccEEE
Q 015044 81 ISVFVRDESGVVDLIDEVFARRGYNIESLAVSGNKDK--GLFTIVVSGTDRVLQQVIEQLQKLVNVLK 146 (414)
Q Consensus 81 LSVlVeN~pGVLsRItgLFsRRGyNIeSLtVg~Ted~--~iiTIVV~gde~~veQl~kQL~KLidVik 146 (414)
+.|.|+|+--+=.+|=.++++.|-.|..=.==+..+. ++++|+++|+.+.+..+..+|.+|-.|--
T Consensus 10 igIiVe~r~~~a~kvn~iL~~yg~~I~gRmGiP~~~~~~~iIsl~v~~~~d~I~aL~gkLg~i~GV~v 77 (86)
T 2nzc_A 10 LTIVVEDREKAYRQVNELLHNFSEDILLRVGYPVREENMAIIFLVLKTDNDTIGALSGKLGQISGVRV 77 (86)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTGGGEEEEEEEEEGGGTEEEEEEEEEECHHHHHHHHHHHHTSTTEEE
T ss_pred EEEEEeCchhhHHHHHHHHHhccCEEEEEcCCCcCcCCceEEEEEEECCHHHHHHHHHHhCCCCCEEE
Confidence 9999999998888999999999998875332244444 45999999999999999999999987743
No 53
>2dt9_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; 2.15A {Thermus thermophilus} PDB: 2zho_A
Probab=87.36 E-value=1.8 Score=37.78 Aligned_cols=43 Identities=19% Similarity=0.250 Sum_probs=33.4
Q ss_pred EEEEEeC---chhHHHHHHHHHhccCcceeeEEeeecCCCcEEEEEEeCc
Q 015044 81 ISVFVRD---ESGVVDLIDEVFARRGYNIESLAVSGNKDKGLFTIVVSGT 127 (414)
Q Consensus 81 LSVlVeN---~pGVLsRItgLFsRRGyNIeSLtVg~Ted~~iiTIVV~gd 127 (414)
+|+.-.+ +||+++|+...|++.|+||.-++ .+|. -++++|+.+
T Consensus 98 vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~~is--~Se~--~is~vv~~~ 143 (167)
T 2dt9_A 98 VSIVGVGLASTPEVPAKMFQAVASTGANIEMIA--TSEV--RISVIIPAE 143 (167)
T ss_dssp EEEEESSGGGSTHHHHHHHHHHHHTTCCCCEEE--ECSS--EEEEEEEGG
T ss_pred EEEECCCcccCcCHHHHHHHHHHHCCCCEEEEE--ccCC--EEEEEEeHH
Confidence 7777665 99999999999999999998776 3322 466777643
No 54
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis}
Probab=86.85 E-value=2.1 Score=45.33 Aligned_cols=98 Identities=17% Similarity=0.279 Sum_probs=65.8
Q ss_pred EeCchhHHHHHHHHHhccCcceeeEEeeecCCCcE-EEEEEeCch-hHHHHHHHHHhcCc-------cEEEEEecCCchh
Q 015044 85 VRDESGVVDLIDEVFARRGYNIESLAVSGNKDKGL-FTIVVSGTD-RVLQQVIEQLQKLV-------NVLKVEDFSNEPV 155 (414)
Q Consensus 85 VeN~pGVLsRItgLFsRRGyNIeSLtVg~Ted~~i-iTIVV~gde-~~veQl~kQL~KLi-------dVikV~dlt~~~~ 155 (414)
+.++||++.||-+.|++.|+||+-++.+.+++... +++++..++ +...++.+++.+-+ ...+| .
T Consensus 278 ~~~~~g~~~~if~~La~~~I~Vd~I~qs~~~~~~~~Isftv~~~~~~~a~~~l~~~~~el~~~~~~~~~~~v-------~ 350 (600)
T 3l76_A 278 VPDRPGVASKLFRDIAQQQVDIDLIIQSIHDGNSNDIAFTVVKDLLNTAEAVTSAIAPALRSYPEADQEAEI-------I 350 (600)
T ss_dssp EECSTTHHHHHHHHHHHTTCCCCCEEBCCCBTTEEEEEEEECGGGHHHHHHHHHHHGGGGSSSTTCSSSSEE-------E
T ss_pred CCCcccHHHHHHHHHHHcCCCEEEEEeeccCCCCceEEEEEeHHHHHHHHHHHHHHHHHhhccccccCccee-------E
Confidence 46899999999999999999999998877664332 777776543 22333333332211 11111 2
Q ss_pred hheeeeEEEEecCccccccccCCHHHHHHHHHhhccCCc
Q 015044 156 IERELMLIKVNADPKFCAEVSGDPGKVAAVQRNSSTVGI 194 (414)
Q Consensus 156 V~REL~LiKV~~~~~~r~EvTG~~~KIdafi~~L~~fGI 194 (414)
+++.+++|-|--. .+.+.++-...+++.|...||
T Consensus 351 ~~~~~a~VsvVG~-----gm~~~~Gv~a~if~aL~~~~I 384 (600)
T 3l76_A 351 VEKGIAKIAIAGA-----GMIGRPGIAAKMFKTLADVGV 384 (600)
T ss_dssp EECSEEEEEEECG-----GGTTCTTHHHHHHHHHHHTTC
T ss_pred ecCCeEEEEEECC-----CcccCccHHHHHHHHHHhCCC
Confidence 4456777765433 566788889999999998885
No 55
>2re1_A Aspartokinase, alpha and beta subunits; structural genomics, protein structure initiative, midwest center for structural genomics; 2.75A {Neisseria meningitidis MC58}
Probab=86.24 E-value=1.4 Score=38.59 Aligned_cols=42 Identities=19% Similarity=0.280 Sum_probs=33.3
Q ss_pred EEEEEeC---chhHHHHHHHHHhccCcceeeEEeeecCCCcEEEEEEeC
Q 015044 81 ISVFVRD---ESGVVDLIDEVFARRGYNIESLAVSGNKDKGLFTIVVSG 126 (414)
Q Consensus 81 LSVlVeN---~pGVLsRItgLFsRRGyNIeSLtVg~Ted~~iiTIVV~g 126 (414)
+++.-.+ +||++.|+...|++.|+||+.++ + ...-++++++.
T Consensus 106 vsvvG~~m~~~~Gv~a~i~~aL~~~~InI~~is---t-se~~is~vv~~ 150 (167)
T 2re1_A 106 VSAVGLGMRSHVGVAAKIFRTLAEEGINIQMIS---T-SEIKVSVLIDE 150 (167)
T ss_dssp EEEECSSCTTCCCHHHHHHHHHHHTTCCCCEEE---E-CSSEEEEEEEG
T ss_pred EEEECCCcCCCcCHHHHHHHHHHHCCCcEEEEE---c-ccCEEEEEEeH
Confidence 7777665 99999999999999999999986 2 22236777764
No 56
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=85.46 E-value=2 Score=42.01 Aligned_cols=60 Identities=17% Similarity=0.152 Sum_probs=44.7
Q ss_pred EEEEEeC-chhHHHHHHHHHhccCcceeeEEeeecCCCcE-EEEEEeCchhHHHHHHHHHhcC
Q 015044 81 ISVFVRD-ESGVVDLIDEVFARRGYNIESLAVSGNKDKGL-FTIVVSGTDRVLQQVIEQLQKL 141 (414)
Q Consensus 81 LSVlVeN-~pGVLsRItgLFsRRGyNIeSLtVg~Ted~~i-iTIVV~gde~~veQl~kQL~KL 141 (414)
+.++..+ .+|.+.+|+.+++.+|.||+++..-. +.+.. +.+.+..++....++..++.++
T Consensus 104 ~~llg~~~~~~~~~~i~~~l~~~~~Ni~~l~~~~-~~~~~~~~~~v~~~~~~~~~l~~~l~~l 165 (415)
T 3p96_A 104 IFVLGRPITAAAFGAVAREVAALGVNIDLIRGVS-DYPVIGLELRVSVPPGADEALRTALNRV 165 (415)
T ss_dssp EEEEESSCCHHHHHHHHHHHHHTTCEEEEEEEEE-SSSSEEEEEEEECCTTCHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHHcCCCccceeecc-CCCceEEEEEeeCCCCCHHHHHHHHHHH
Confidence 8888888 89999999999999999999987644 33433 5555665555566666666554
No 57
>1jq5_A Glycerol dehydrogenase; oxidoreductase, NAD, glycerol metabolism; HET: NAD; 1.70A {Geobacillus stearothermophilus} SCOP: e.22.1.2 PDB: 1jpu_A* 1jqa_A*
Probab=85.44 E-value=0.44 Score=46.61 Aligned_cols=82 Identities=10% Similarity=0.084 Sum_probs=60.1
Q ss_pred CeEEecccCcCCHHHHHHHHHHHHHcCCcee-eEeecCch----HHHHHHHHhCCCeEEEEEeCCCCCCCCcCCccccC-
Q 015044 280 TDVIIVLQHPSDYNVMQDAIAILCENDNICC-QVMKSYTK----KQLITKLSRSGRKVIIATDHGVGAFLDKIDLLASG- 353 (414)
Q Consensus 280 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~~-~V~SaH~p----~~~~~~~~~~g~~ViIavA~G~sa~Lp~~gvvAg~- 353 (414)
.+|.||++..+.....++..+.|++.|+.+. .+.+-+.+ .+..+.+++.++++|||+=||...-+. +.+|-+
T Consensus 32 ~~~livtd~~~~~~~~~~v~~~L~~~g~~~~~~~~~ge~~~~~v~~~~~~~~~~~~d~IIavGGGsv~D~a--K~iA~~~ 109 (370)
T 1jq5_A 32 NKTVVIADEIVWKIAGHTIVNELKKGNIAAEEVVFSGEASRNEVERIANIARKAEAAIVIGVGGGKTLDTA--KAVADEL 109 (370)
T ss_dssp SEEEEEECHHHHHHTHHHHHHHHHTTTCEEEEEECCSSCBHHHHHHHHHHHHHTTCSEEEEEESHHHHHHH--HHHHHHH
T ss_pred CeEEEEEChHHHHHHHHHHHHHHHHcCCeEEEEeeCCCCCHHHHHHHHHHHHhcCCCEEEEeCChHHHHHH--HHHHHhc
Confidence 4799999887766678888899999899875 33332322 445556777889999999866767777 777643
Q ss_pred -ccEEEecCcC
Q 015044 354 -SPVIGVPVRA 363 (414)
Q Consensus 354 -T~VIgVP~~~ 363 (414)
.++|.||+..
T Consensus 110 ~~p~i~IPTTa 120 (370)
T 1jq5_A 110 DAYIVIVPTAA 120 (370)
T ss_dssp TCEEEEEESSC
T ss_pred CCCEEEecccc
Confidence 2399999975
No 58
>3uhj_A Probable glycerol dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.34A {Sinorhizobium meliloti}
Probab=83.13 E-value=0.53 Score=47.09 Aligned_cols=81 Identities=7% Similarity=0.043 Sum_probs=53.0
Q ss_pred CeEEecccCcCCHHHHHHHHHHHHHcCCcee-eEeecC-ch---HHHHHHHHhCCCeEEEEEeCCCCCCCCcCCccccCc
Q 015044 280 TDVIIVLQHPSDYNVMQDAIAILCENDNICC-QVMKSY-TK---KQLITKLSRSGRKVIIATDHGVGAFLDKIDLLASGS 354 (414)
Q Consensus 280 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~~-~V~SaH-~p---~~~~~~~~~~g~~ViIavA~G~sa~Lp~~gvvAg~T 354 (414)
-++.||++...-....++..+.|++ |+.+. .....+ +. .+..+.+++.++++|||+=||..--+. ..+|-+.
T Consensus 53 ~r~liVtd~~~~~~~~~~v~~~L~~-g~~~~~~~~~~~p~~~~v~~~~~~~~~~~~d~IIavGGGs~~D~A--K~iA~~~ 129 (387)
T 3uhj_A 53 KRALVLIDRVLFDALSERIGKSCGD-SLDIRFERFGGECCTSEIERVRKVAIEHGSDILVGVGGGKTADTA--KIVAIDT 129 (387)
T ss_dssp SEEEEEECTTTHHHHHHHC-------CCEEEEEECCSSCSHHHHHHHHHHHHHHTCSEEEEESSHHHHHHH--HHHHHHT
T ss_pred CEEEEEECchHHHHHHHHHHHHHHc-CCCeEEEEcCCCCCHHHHHHHHHHHhhcCCCEEEEeCCcHHHHHH--HHHHHhc
Confidence 4799999988876678888899999 99874 223344 22 455556667789999999866655566 5665433
Q ss_pred c--EEEecCcC
Q 015044 355 P--VIGVPVRA 363 (414)
Q Consensus 355 ~--VIgVP~~~ 363 (414)
. +|.||+..
T Consensus 130 ~~p~i~IPTTa 140 (387)
T 3uhj_A 130 GARIVIAPTIA 140 (387)
T ss_dssp TCEEEECCSSC
T ss_pred CCCEEEecCcc
Confidence 3 99999975
No 59
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis}
Probab=83.03 E-value=4.4 Score=42.80 Aligned_cols=110 Identities=18% Similarity=0.247 Sum_probs=69.3
Q ss_pred EEeCchhHHHHHHHHHhccCcceeeEEeeecCC--Cc----EEEEEEeCch-hHHHHHHHHHhcCccEEEEEecCCchhh
Q 015044 84 FVRDESGVVDLIDEVFARRGYNIESLAVSGNKD--KG----LFTIVVSGTD-RVLQQVIEQLQKLVNVLKVEDFSNEPVI 156 (414)
Q Consensus 84 lVeN~pGVLsRItgLFsRRGyNIeSLtVg~Ted--~~----iiTIVV~gde-~~veQl~kQL~KLidVikV~dlt~~~~V 156 (414)
-+.|+||+..||-+.|++.|+|++=+..+..++ .| -+++++..++ +...++.+++.+-++-.+| .+
T Consensus 451 ~~~~~~g~~~~if~~La~~~I~vDmI~q~~~~~~~~g~~~~~isftv~~~d~~~a~~~l~~~~~~~~~~~v-------~~ 523 (600)
T 3l76_A 451 HVPDRPGMAAQLFTALAEANISVDMIIQSQRCRINQGTPCRDIAFMVAEGDSSQAEAILQPLIKDWLDAAI-------VV 523 (600)
T ss_dssp EEESSTTHHHHHHHHHHHTTCCCCEEEEEEECCCSSSSCEEEEEEEEEHHHHHHHHHHHHHHTTTSTTCEE-------EE
T ss_pred cCCCCccHHHHHHHHHHHcCCcEEEEEecccccccCCCccceEEEEEeHHHHHHHHHHHHHHHHhcCCceE-------EE
Confidence 468999999999999999999999999887764 23 3777776332 2333333343332221111 22
Q ss_pred heeeeEEEEecCccccccccCCHHHHHHHHHhhccCCc-EEEecccceee
Q 015044 157 ERELMLIKVNADPKFCAEVSGDPGKVAAVQRNSSTVGI-LEIARTGKTAF 205 (414)
Q Consensus 157 ~REL~LiKV~~~~~~r~EvTG~~~KIdafi~~L~~fGI-lEiaRTG~iAl 205 (414)
+..++ ||.+=.. -+.+.++=...|.+.|.+-|| +++.-|--+-+
T Consensus 524 ~~~~a--kVSiVG~---GM~~~~Gvaa~~f~aL~~~~Ini~mistSEi~I 568 (600)
T 3l76_A 524 NKAIA--KVSIVGS---GMIGHPGVAAHFFAALAQENINIEMIATSEIKI 568 (600)
T ss_dssp ECCEE--EEEEECG---GGTTCTTHHHHHHHHHHTTTCCCCEEEECSSEE
T ss_pred eCCeE--EEEEECc---ccccCccHHHHHHHHHHHCCCceEEEEcCCceE
Confidence 33444 4443221 466788888889999999886 44443554433
No 60
>3bfj_A 1,3-propanediol oxidoreductase; opportunistic pathogens, decamer, structural genomics,struct proteomics in europe, spine; 2.70A {Klebsiella pneumoniae}
Probab=82.50 E-value=0.74 Score=45.34 Aligned_cols=81 Identities=11% Similarity=0.121 Sum_probs=57.2
Q ss_pred eEEecccCcCCHH---HHHHHHHHHHHcCCceeeEee--cC-ch---HHHHHHHHhCCCeEEEEEeCCCCCCCCcCCccc
Q 015044 281 DVIIVLQHPSDYN---VMQDAIAILCENDNICCQVMK--SY-TK---KQLITKLSRSGRKVIIATDHGVGAFLDKIDLLA 351 (414)
Q Consensus 281 ~V~IimGS~SD~~---v~~~a~~~L~~~gi~~~~V~S--aH-~p---~~~~~~~~~~g~~ViIavA~G~sa~Lp~~gvvA 351 (414)
+|.||++...-.. ..++..+.|++-|+.+..+.. .+ +. .+..+.+++.++++|||+=||..--+. ..+|
T Consensus 35 ~~livtd~~~~~~~~g~~~~v~~~L~~~g~~~~~~~~~~~~p~~~~v~~~~~~~~~~~~d~IIavGGGsv~D~a--K~iA 112 (387)
T 3bfj_A 35 KALLVTDKGLRAIKDGAVDKTLHYLREAGIEVAIFDGVEPNPKDTNVRDGLAVFRREQCDIIVTVGGGSPHDCG--KGIG 112 (387)
T ss_dssp EEEEECCTTTC--CCSSHHHHHHHHHHTTCEEEEECCCCSSCBHHHHHHHHHHHHHTTCCEEEEEESHHHHHHH--HHHH
T ss_pred EEEEEECcchhhccchHHHHHHHHHHHcCCeEEEECCccCCCCHHHHHHHHHHHHhcCCCEEEEeCCcchhhHH--HHHH
Confidence 7999998877555 789999999999998753322 33 22 556666777899999999855555555 5555
Q ss_pred cC--------------------ccEEEecCcC
Q 015044 352 SG--------------------SPVIGVPVRA 363 (414)
Q Consensus 352 g~--------------------T~VIgVP~~~ 363 (414)
.. .++|.||+..
T Consensus 113 ~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTT~ 144 (387)
T 3bfj_A 113 IAATHEGDLYQYAGIETLTNPLPPIVAVNTTA 144 (387)
T ss_dssp HHHHSSSCSGGGCBSSCCCSCCCCEEEEECST
T ss_pred HHHhCCCCHHHHhcccccCCCCCCEEEEeCCC
Confidence 42 2399999876
No 61
>3okf_A 3-dehydroquinate synthase; structural genomics, center for structural genomics of infec diseases, csgid, NAD, lyase; HET: NAD; 2.50A {Vibrio cholerae o1 biovar eltor}
Probab=82.13 E-value=0.83 Score=46.11 Aligned_cols=81 Identities=21% Similarity=0.152 Sum_probs=62.0
Q ss_pred CeEEecccCcCCHHHHHHHHHHHHHcCCcee-eEeecC--ch-----HHHHHHHHhCCC---eEEEEEeCCCCCCCCcCC
Q 015044 280 TDVIIVLQHPSDYNVMQDAIAILCENDNICC-QVMKSY--TK-----KQLITKLSRSGR---KVIIATDHGVGAFLDKID 348 (414)
Q Consensus 280 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~~-~V~SaH--~p-----~~~~~~~~~~g~---~ViIavA~G~sa~Lp~~g 348 (414)
.+|.||++....-.+.++..+.|++.|+++. .+...- .| .+..+.+.+.|+ ++|||+=||...-+. +
T Consensus 63 ~rvlIVtd~~v~~~~~~~v~~~L~~~g~~~~~~~~~~gE~~kt~~~v~~~~~~l~~~~~~R~d~IIAvGGGsv~D~a--k 140 (390)
T 3okf_A 63 QKVVIVTNHTVAPLYAPAIISLLDHIGCQHALLELPDGEQYKTLETFNTVMSFLLEHNYSRDVVVIALGGGVIGDLV--G 140 (390)
T ss_dssp CEEEEEEETTTHHHHHHHHHHHHHHHTCEEEEEEECSSGGGCBHHHHHHHHHHHHHTTCCTTCEEEEEESHHHHHHH--H
T ss_pred CEEEEEECCcHHHHHHHHHHHHHHHcCCeEEEEEECCCcCCchHHHHHHHHHHHHhcCCCcCcEEEEECCcHHhhHH--H
Confidence 4799999999887789999999999999987 444332 22 455566666777 799999978777788 8
Q ss_pred ccccCc----cEEEecCc
Q 015044 349 LLASGS----PVIGVPVR 362 (414)
Q Consensus 349 vvAg~T----~VIgVP~~ 362 (414)
.+|+.. ++|.||+.
T Consensus 141 ~~Aa~~~rgip~I~IPTT 158 (390)
T 3okf_A 141 FAAACYQRGVDFIQIPTT 158 (390)
T ss_dssp HHHHHBTTCCEEEEEECS
T ss_pred HHHHHhcCCCCEEEeCCC
Confidence 887532 29999996
No 62
>3s1t_A Aspartokinase; ACT domain, threonine binding, regulatory domain of aspartok transferase; 1.63A {Mycobacterium tuberculosis}
Probab=80.63 E-value=3.5 Score=36.88 Aligned_cols=53 Identities=25% Similarity=0.344 Sum_probs=37.1
Q ss_pred EEEEEe---CchhHHHHHHHHHhccCcceeeEEeeecCCCcEEEEEEeCc--hhHHHHHHHH
Q 015044 81 ISVFVR---DESGVVDLIDEVFARRGYNIESLAVSGNKDKGLFTIVVSGT--DRVLQQVIEQ 137 (414)
Q Consensus 81 LSVlVe---N~pGVLsRItgLFsRRGyNIeSLtVg~Ted~~iiTIVV~gd--e~~veQl~kQ 137 (414)
+|+.-. ++||++.|+...|++.|+||+-++.+ + --+.++|+.+ ++.++.|-+.
T Consensus 99 VsvVG~gm~~~~Gvaa~~f~aLa~~~InI~~IstS---e-i~Is~vV~~~d~~~Av~aLH~~ 156 (181)
T 3s1t_A 99 VSLIGAGMRSHPGVTATFCEALAAVGVNIELISTS---E-IRISVLCRDTELDKAVVALHEA 156 (181)
T ss_dssp EEEEEECCTTCHHHHHHHHHHHHHTTCCCCEEEEE---T-TEEEEEEEGGGHHHHHHHHHHH
T ss_pred EEEEecccccCchHHHHHHHHHHHCCCcEEEEEcC---C-CEEEEEEeHHHHHHHHHHHHHH
Confidence 666655 89999999999999999999999822 2 2266666643 2334444443
No 63
>2rjz_A PILO protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Pseudomonas aeruginosa}
Probab=79.79 E-value=3.2 Score=36.33 Aligned_cols=66 Identities=17% Similarity=0.269 Sum_probs=56.8
Q ss_pred CchhHHHHHHHHHhccCcceeeEEeeecCCCc-E----EEEEEeCchhHHHHHHHHHhcCccEEEEEecCC
Q 015044 87 DESGVVDLIDEVFARRGYNIESLAVSGNKDKG-L----FTIVVSGTDRVLQQVIEQLQKLVNVLKVEDFSN 152 (414)
Q Consensus 87 N~pGVLsRItgLFsRRGyNIeSLtVg~Ted~~-i----iTIVV~gde~~veQl~kQL~KLidVikV~dlt~ 152 (414)
.-|++|..|..+=...|..++++..++....+ + ++|.|.|+-..+-+....|++|-.++.+.+++-
T Consensus 43 em~~LL~~i~~~~~~~GL~l~~~~p~~~~~~~~y~e~Pv~i~v~G~Y~~l~~Fl~~l~~LpRiv~~~~~~i 113 (147)
T 2rjz_A 43 EVPGLLEDITRTGLGSGLEFEEIKLLPEVAQQFYIELPIQISVVGGYHDLATFVSGVSSLPRIVTLHDFEI 113 (147)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEEECCCEECSSEEEEEEEEEEEECHHHHHHHHHHHHTSSSCEEEEEEEE
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeeecCccccCcEEEEeEEEEEEEeHHHHHHHHHHHHcCCcEEEEeeeEE
Confidence 34899999999999999999999988654443 2 899999999999999999999988888888753
No 64
>1o2d_A Alcohol dehydrogenase, iron-containing; TM0920, structural genomics, JCSG, PSI, protein structure initiative; HET: MSE NAP TRS; 1.30A {Thermotoga maritima} SCOP: e.22.1.2 PDB: 1vhd_A*
Probab=76.65 E-value=1.2 Score=43.73 Aligned_cols=83 Identities=13% Similarity=0.158 Sum_probs=56.5
Q ss_pred CeEEecccCcCCHH--HHHHHHHHHHHcCCceeeEe--ecC-ch---HHHHHHHHhCCCeEEEEEeCCCCCCCCcCCccc
Q 015044 280 TDVIIVLQHPSDYN--VMQDAIAILCENDNICCQVM--KSY-TK---KQLITKLSRSGRKVIIATDHGVGAFLDKIDLLA 351 (414)
Q Consensus 280 ~~V~IimGS~SD~~--v~~~a~~~L~~~gi~~~~V~--SaH-~p---~~~~~~~~~~g~~ViIavA~G~sa~Lp~~gvvA 351 (414)
.++.||++..+-.. ..++..+.|++-|+.+..+. ..+ +. .+..+.+++.+.++|||+=||..--+. +.+|
T Consensus 41 ~~~liVtd~~~~~~~g~~~~v~~~L~~~g~~~~~~~~~~~~p~~~~v~~~~~~~~~~~~d~IIavGGGsv~D~A--K~iA 118 (371)
T 1o2d_A 41 KRALVVTGKSSSKKNGSLDDLKKLLDETEISYEIFDEVEENPSFDNVMKAVERYRNDSFDFVVGLGGGSPMDFA--KAVA 118 (371)
T ss_dssp SEEEEEEESSGGGTSSHHHHHHHHHHHTTCEEEEEEEECSSCBHHHHHHHHHHHTTSCCSEEEEEESHHHHHHH--HHHH
T ss_pred CEEEEEECchHHhhccHHHHHHHHHHHcCCeEEEeCCccCCCCHHHHHHHHHHHHhcCCCEEEEeCChHHHHHH--HHHH
Confidence 37999998755333 78889999999999876332 244 33 555566666788999999855555555 4444
Q ss_pred cC--------------------ccEEEecCcCC
Q 015044 352 SG--------------------SPVIGVPVRAS 364 (414)
Q Consensus 352 g~--------------------T~VIgVP~~~~ 364 (414)
.. .++|.||+..+
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~p~i~IPTTag 151 (371)
T 1o2d_A 119 VLLKEKDLSVEDLYDREKVKHWLPVVEIPTTAG 151 (371)
T ss_dssp HHTTSTTCCSGGGGCGGGCCCCCCEEEEECSSC
T ss_pred HHHhCCCCCHHHHhcccCCCCCCeEEEEeCCCc
Confidence 42 22999999753
No 65
>3ox4_A Alcohol dehydrogenase 2; iron, NAD, oxidoreductase; HET: NAD; 2.00A {Zymomonas mobilis} PDB: 3owo_A*
Probab=75.80 E-value=0.69 Score=45.87 Aligned_cols=81 Identities=14% Similarity=0.108 Sum_probs=55.6
Q ss_pred eEEecccCcCCH-HHHHHHHHHHHHcCCceeeEe--ecC-ch---HHHHHHHHhCCCeEEEEEeCCCCCCCCcCCccccC
Q 015044 281 DVIIVLQHPSDY-NVMQDAIAILCENDNICCQVM--KSY-TK---KQLITKLSRSGRKVIIATDHGVGAFLDKIDLLASG 353 (414)
Q Consensus 281 ~V~IimGS~SD~-~v~~~a~~~L~~~gi~~~~V~--SaH-~p---~~~~~~~~~~g~~ViIavA~G~sa~Lp~~gvvAg~ 353 (414)
+|.||++..-.- ...++..+.|++.|+.+..+. ..+ +. .+.++.+++.++++|||+=||..--+. ..+|..
T Consensus 33 ~~liVtd~~~~~~g~~~~v~~~L~~~gi~~~~~~~v~~~p~~~~v~~~~~~~~~~~~D~IIavGGGsv~D~a--K~ia~~ 110 (383)
T 3ox4_A 33 NALIVSDAFMNKSGVVKQVADLLKAQGINSAVYDGVMPNPTVTAVLEGLKILKDNNSDFVISLGGGSPHDCA--KAIALV 110 (383)
T ss_dssp EEEEEEEHHHHHTTHHHHHHHHHHTTTCEEEEEEEECSSCBHHHHHHHHHHHHHHTCSEEEEEESHHHHHHH--HHHHHH
T ss_pred EEEEEECCchhhCchHHHHHHHHHHcCCeEEEECCccCCCCHHHHHHHHHHHHhcCcCEEEEeCCcHHHHHH--HHHHHH
Confidence 788998864322 257888889999999886332 244 33 556666777789999999966555555 555543
Q ss_pred c--------------------cEEEecCcC
Q 015044 354 S--------------------PVIGVPVRA 363 (414)
Q Consensus 354 T--------------------~VIgVP~~~ 363 (414)
. ++|.||+..
T Consensus 111 ~~~~~~~~d~~~~~~~~~~~~p~i~IPTTa 140 (383)
T 3ox4_A 111 ATNGGEVKDYEGIDKSKKPALPLMSINTTA 140 (383)
T ss_dssp HHSCSSGGGGCEESCCSSCCSCEEEEECSS
T ss_pred HhCCCCHHHHhcccccccCCCCEEEEeCCC
Confidence 3 299999976
No 66
>1rrm_A Lactaldehyde reductase; structural genomics, dehydrogenase, PSI, protein structure initiative; HET: APR; 1.60A {Escherichia coli} SCOP: e.22.1.2 PDB: 2bi4_A* 2bl4_A*
Probab=75.74 E-value=0.79 Score=45.04 Aligned_cols=81 Identities=17% Similarity=0.137 Sum_probs=56.2
Q ss_pred eEEecccCcCCH-HHHHHHHHHHHHcCCceeeEee--cC-ch---HHHHHHHHhCCCeEEEEEeCCCCCCCCcCCccccC
Q 015044 281 DVIIVLQHPSDY-NVMQDAIAILCENDNICCQVMK--SY-TK---KQLITKLSRSGRKVIIATDHGVGAFLDKIDLLASG 353 (414)
Q Consensus 281 ~V~IimGS~SD~-~v~~~a~~~L~~~gi~~~~V~S--aH-~p---~~~~~~~~~~g~~ViIavA~G~sa~Lp~~gvvAg~ 353 (414)
+|.||++..... ...++..+.|++-|+.+..+.. .+ +. .+..+.+++.++++|||+=||..--+. +.+|..
T Consensus 33 ~~livtd~~~~~~g~~~~v~~~L~~~g~~~~~~~~~~~~p~~~~v~~~~~~~~~~~~d~IIavGGGsv~D~a--K~iA~~ 110 (386)
T 1rrm_A 33 KALIVTDKTLVQCGVVAKVTDKMDAAGLAWAIYDGVVPNPTITVVKEGLGVFQNSGADYLIAIGGGSPQDTC--KAIGII 110 (386)
T ss_dssp EEEEECBHHHHHTTHHHHHHHHHHHTTCEEEEECBCCSSCBHHHHHHHHHHHHHHTCSEEEEEESHHHHHHH--HHHHHH
T ss_pred EEEEEECcchhhchHHHHHHHHHHHcCCeEEEECCccCCCCHHHHHHHHHHHHhcCcCEEEEeCChHHHHHH--HHHHHH
Confidence 789999866533 3788889999999988763332 33 22 556666777789999999855555555 555543
Q ss_pred c----------------------cEEEecCcC
Q 015044 354 S----------------------PVIGVPVRA 363 (414)
Q Consensus 354 T----------------------~VIgVP~~~ 363 (414)
. ++|.||+..
T Consensus 111 ~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTT~ 142 (386)
T 1rrm_A 111 SNNPEFADVRSLEGLSPTNKPSVPILAIPTTA 142 (386)
T ss_dssp HHCGGGTTSGGGSEECCCCSCCSCEEEEECSS
T ss_pred HhCCCCCCHHHHhcccccCCCCCCEEEEeCCC
Confidence 2 399999866
No 67
>2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10
Probab=74.80 E-value=9.8 Score=39.55 Aligned_cols=99 Identities=15% Similarity=0.272 Sum_probs=66.7
Q ss_pred EEEE---EeCchhHHHHHHHHHhccCcceeeEEeeecCCCcEEEEEEeCch--------hHHHHHHHHHhcCccEEEEEe
Q 015044 81 ISVF---VRDESGVVDLIDEVFARRGYNIESLAVSGNKDKGLFTIVVSGTD--------RVLQQVIEQLQKLVNVLKVED 149 (414)
Q Consensus 81 LSVl---VeN~pGVLsRItgLFsRRGyNIeSLtVg~Ted~~iiTIVV~gde--------~~veQl~kQL~KLidVikV~d 149 (414)
|++. .-++||++.||-..|++.|+||+.++.+ ..-++++++.++ +.++++.++|.+.-+|
T Consensus 344 I~i~~~~m~~~~g~~~~if~~la~~~I~vd~I~ss----e~sis~~v~~~~~~~~~~~~~~l~~~~~el~~~~~v----- 414 (510)
T 2cdq_A 344 LDIASTRMLGQVGFLAKVFSIFEELGISVDVVATS----EVSISLTLDPSKLWSRELIQQELDHVVEELEKIAVV----- 414 (510)
T ss_dssp EEEECGGGTTCTTHHHHHHHHHHHTTCCEEEEEEE----TTEEEEEECCGGGSSSCCCHHHHHHHHHHHTTTSEE-----
T ss_pred EEEEcCCCCCcccHHHHHHHHHHHcCCcEEEEEeC----CCeEEEEEechHhhhhhHHHHHHHHHHHHhCCCCeE-----
Confidence 5554 3468999999999999999999999643 233777776543 4677777777763221
Q ss_pred cCCchhhheeeeEEEEecCccccccccCCHHHHHHHHHhhccCCc-EEEec
Q 015044 150 FSNEPVIERELMLIKVNADPKFCAEVSGDPGKVAAVQRNSSTVGI-LEIAR 199 (414)
Q Consensus 150 lt~~~~V~REL~LiKV~~~~~~r~EvTG~~~KIdafi~~L~~fGI-lEiaR 199 (414)
.+++.+++|-|--. +.+.++-...+.+.|..-|| ++++-
T Consensus 415 -----~~~~~~a~VsiVG~------m~~~~Gvaa~~f~aL~~~~InI~mIs 454 (510)
T 2cdq_A 415 -----NLLKGRAIISLIGN------VQHSSLILERAFHVLYTKGVNVQMIS 454 (510)
T ss_dssp -----EEEEEEEEEEEEEC------GGGHHHHHHHHHHHHHHHTCCCSEEE
T ss_pred -----EEeCCcEEEEEEEE------CCCChhHHHHHHHHHHHCCCCEEEEE
Confidence 23456777765433 34566777778888887665 44443
No 68
>3ce9_A Glycerol dehydrogenase; NP_348253.1, 3-dehydroquinate syntha structural genomics, joint center for structural genomics; HET: MSE; 2.37A {Clostridium acetobutylicum atcc 824}
Probab=73.92 E-value=0.91 Score=44.10 Aligned_cols=81 Identities=12% Similarity=-0.061 Sum_probs=58.7
Q ss_pred eEEecccCcCCHHHHHHHHHHHHHcCCceeeEe-ecC-ch---HHHHHHHHhCCCeEEEEEeCCCCCCCCcCCccccC--
Q 015044 281 DVIIVLQHPSDYNVMQDAIAILCENDNICCQVM-KSY-TK---KQLITKLSRSGRKVIIATDHGVGAFLDKIDLLASG-- 353 (414)
Q Consensus 281 ~V~IimGS~SD~~v~~~a~~~L~~~gi~~~~V~-SaH-~p---~~~~~~~~~~g~~ViIavA~G~sa~Lp~~gvvAg~-- 353 (414)
++.||++........++..+.|++-|+++..+. -.+ +. .+. +.+++.+.++|||+=||...-+. +.+|-.
T Consensus 36 ~~livtd~~~~~~~~~~v~~~L~~~g~~~~~~~~~~~~~~~~v~~~-~~~~~~~~d~IIavGGGsv~D~a--K~vA~~~~ 112 (354)
T 3ce9_A 36 RVSLYFGEGIYELFGETIEKSIKSSNIEIEAVETVKNIDFDEIGTN-AFKIPAEVDALIGIGGGKAIDAV--KYMAFLRK 112 (354)
T ss_dssp EEEEEEETTHHHHHHHHHHHHHHTTTCEEEEEEEECCCBHHHHHHH-HTTSCTTCCEEEEEESHHHHHHH--HHHHHHHT
T ss_pred eEEEEECccHHHHHHHHHHHHHHHcCCeEEEEecCCCCCHHHHHHH-HHhhhcCCCEEEEECChHHHHHH--HHHHhhcC
Confidence 799999988766788889999999999887333 344 33 333 44555678999999866666677 667643
Q ss_pred ccEEEecCcCC
Q 015044 354 SPVIGVPVRAS 364 (414)
Q Consensus 354 T~VIgVP~~~~ 364 (414)
.++|.||+..+
T Consensus 113 ~p~i~IPTT~~ 123 (354)
T 3ce9_A 113 LPFISVPTSTS 123 (354)
T ss_dssp CCEEEEESCCS
T ss_pred CCEEEecCccc
Confidence 23999999764
No 69
>1vlj_A NADH-dependent butanol dehydrogenase; TM0820, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: NAP; 1.78A {Thermotoga maritima} SCOP: e.22.1.2
Probab=73.86 E-value=2.3 Score=42.38 Aligned_cols=82 Identities=12% Similarity=0.118 Sum_probs=55.4
Q ss_pred CeEEecccCcCCH--HHHHHHHHHHHHcCCceeeEee--cC-ch---HHHHHHHHhCCCeEEEEEeCCCCCCCCcCCccc
Q 015044 280 TDVIIVLQHPSDY--NVMQDAIAILCENDNICCQVMK--SY-TK---KQLITKLSRSGRKVIIATDHGVGAFLDKIDLLA 351 (414)
Q Consensus 280 ~~V~IimGS~SD~--~v~~~a~~~L~~~gi~~~~V~S--aH-~p---~~~~~~~~~~g~~ViIavA~G~sa~Lp~~gvvA 351 (414)
.+|.||++..+=. ...++..+.|++-|+.+..+.. .+ +. .+..+.+++.++++|||+=||..--+. ..+|
T Consensus 44 ~r~liVtd~~~~~~~g~~~~v~~~L~~~g~~~~~f~~v~~~p~~~~v~~~~~~~~~~~~D~IIavGGGsviD~A--K~iA 121 (407)
T 1vlj_A 44 RKVLFLYGGGSIKKNGVYDQVVDSLKKHGIEWVEVSGVKPNPVLSKVHEAVEVAKKEKVEAVLGVGGGSVVDSA--KAVA 121 (407)
T ss_dssp CEEEEEECSSHHHHSSHHHHHHHHHHHTTCEEEEECCCCSSCBHHHHHHHHHHHHHTTCSEEEEEESHHHHHHH--HHHH
T ss_pred CeEEEEECchHHhhccHHHHHHHHHHHcCCeEEEecCccCCCCHHHHHHHHHHHHhcCCCEEEEeCChhHHHHH--HHHH
Confidence 3799999854322 3688889999999998763322 23 22 556666777899999999855544455 4444
Q ss_pred cC--------------------ccEEEecCcC
Q 015044 352 SG--------------------SPVIGVPVRA 363 (414)
Q Consensus 352 g~--------------------T~VIgVP~~~ 363 (414)
.. .++|.||+..
T Consensus 122 ~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTTa 153 (407)
T 1vlj_A 122 AGALYEGDIWDAFIGKYQIEKALPIFDVLTIS 153 (407)
T ss_dssp HHTTCSSCGGGGGGTSCCCCCCCCEEEEECSC
T ss_pred HHHhCCCCHHHHhcccccCCCCCCEEEEeCCC
Confidence 42 2399999975
No 70
>4go7_X Aspartokinase; transferase; 2.00A {Mycobacterium tuberculosis} PDB: 4go5_X
Probab=73.63 E-value=4.9 Score=37.02 Aligned_cols=49 Identities=22% Similarity=0.360 Sum_probs=34.5
Q ss_pred EeCchhHHHHHHHHHhccCcceeeEEeeecCCCcEEEEEEeCchhHHHHHHHHHh
Q 015044 85 VRDESGVVDLIDEVFARRGYNIESLAVSGNKDKGLFTIVVSGTDRVLQQVIEQLQ 139 (414)
Q Consensus 85 VeN~pGVLsRItgLFsRRGyNIeSLtVg~Ted~~iiTIVV~gde~~veQl~kQL~ 139 (414)
..++||+..|+-..|++.|+||+-++. + + -.+.++|+. +..++.++.|.
T Consensus 125 M~~~~GVaak~F~aLa~~~INI~mIst--S-E-i~IS~vV~~--~d~~~Av~aLH 173 (200)
T 4go7_X 125 MRSHPGVTATFCEALAAVGVNIELIST--S-E-IRISVLCRD--TELDKAVVALH 173 (200)
T ss_dssp CTTCHHHHHHHHHHHHHTTCCCCEEEE--C-S-SEEEEEEEG--GGHHHHHHHHH
T ss_pred cccCCCcHHHHHHHHHHCCCCEEEEEc--c-C-CEEEEEEeH--HHHHHHHHHHH
Confidence 468999999999999999999999972 2 1 126666653 33444444443
No 71
>1t4a_A PURS; tetramer, complex formyl glycinamide synthetase, FGAR, structural protein; 2.00A {Bacillus subtilis} SCOP: d.284.1.1 PDB: 1twj_A
Probab=72.70 E-value=6.9 Score=31.14 Aligned_cols=56 Identities=14% Similarity=0.433 Sum_probs=40.8
Q ss_pred ccEEEEEEeCchhHHH----HHHHHHhccCc-ceeeEEeeecCCCcEEEEEEeCch----hHHHHHHHHH
Q 015044 78 LRRISVFVRDESGVVD----LIDEVFARRGY-NIESLAVSGNKDKGLFTIVVSGTD----RVLQQVIEQL 138 (414)
Q Consensus 78 MkrLSVlVeN~pGVLs----RItgLFsRRGy-NIeSLtVg~Ted~~iiTIVV~gde----~~veQl~kQL 138 (414)
|.+..|.|..|||+|. .|.+.+.+.|| +++++.++ .++++.+++++ +.++.+.++|
T Consensus 1 ~~~~~V~V~lK~gVlDpqG~av~~al~~LG~~~v~~VR~g-----K~~~l~~~~~~~~a~~~v~~~~~~L 65 (84)
T 1t4a_A 1 MYKVKVYVSLKESVLDPQGSAVQHALHSMTYNEVQDVRIG-----KYMELTIEKSDRDLDVLVKEMCEKL 65 (84)
T ss_dssp CEEEEEEEEECTTSCCHHHHHHHHHHHHTTCTTEEEEEEE-----EEEEEEECCCSSCHHHHHHHHHHHT
T ss_pred CeEEEEEEEECCCCcCcHHHHHHHHHHHcCCCChhheEEE-----EEEEEEecCchHHHHHHHHHHHHHh
Confidence 3447788999999985 66788999999 69988875 35778777652 4455555554
No 72
>1vq3_A Phosphoribosylformylglycinamidine synthase, PURS; TM1244, PURS SUB 6.3.5.3), structural genomics, joint center for structural JCSG; 1.90A {Thermotoga maritima} SCOP: d.284.1.1 PDB: 3d54_B*
Probab=71.20 E-value=19 Score=29.63 Aligned_cols=57 Identities=19% Similarity=0.261 Sum_probs=42.6
Q ss_pred cccEEEEEEeCchhHHH----HHHHHHhccCcc-eeeEEeeecCCCcEEEEEEeCc-----hhHHHHHHHHH
Q 015044 77 ELRRISVFVRDESGVVD----LIDEVFARRGYN-IESLAVSGNKDKGLFTIVVSGT-----DRVLQQVIEQL 138 (414)
Q Consensus 77 ~MkrLSVlVeN~pGVLs----RItgLFsRRGyN-IeSLtVg~Ted~~iiTIVV~gd-----e~~veQl~kQL 138 (414)
+|.+..|.|..|||||. .|.+-+.+.||+ ++++.+| .+|.+.++++ ++.++++.++|
T Consensus 14 ~~~~~~V~V~lKpgVlDPqG~aV~~aL~~LG~~~V~~VR~G-----K~~el~~~~~~~~~a~~~v~~mc~kL 80 (94)
T 1vq3_A 14 PLFKFAIDVQYRSNVRDPRGETIERVLREEKGLPVKKLRLG-----KSIHLEVEAENKEKAYEIVKKACEEL 80 (94)
T ss_dssp CEEEEEEEEEECTTSCCHHHHHHHHHHHHTTCCCEEEEEEE-----EEEEEEEECSSHHHHHHHHHHHHHHT
T ss_pred ceEEEEEEEEECCCCcCcHHHHHHHHHHHcCCCccceeeee-----eEEEEEecCCCHHHHHHHHHHHHHHH
Confidence 46668999999999995 678899999996 8888775 3577777764 34455555554
No 73
>1gtd_A MTH169; synthetase, FGAM synthetase, purine synthesis pathway, PSI, protein structure initiative, NESG; 2.56A {Methanobacterium thermoautotrophicum} SCOP: d.284.1.1
Probab=70.04 E-value=7.1 Score=31.12 Aligned_cols=55 Identities=20% Similarity=0.409 Sum_probs=39.4
Q ss_pred cEEEEEEeCchhHHH----HHHHHHhccCcceeeEEeeecCCCcEEEEEEeCch-----hHHHHHHHHH
Q 015044 79 RRISVFVRDESGVVD----LIDEVFARRGYNIESLAVSGNKDKGLFTIVVSGTD-----RVLQQVIEQL 138 (414)
Q Consensus 79 krLSVlVeN~pGVLs----RItgLFsRRGyNIeSLtVg~Ted~~iiTIVV~gde-----~~veQl~kQL 138 (414)
.+..|.|..|||+|. .|.+-+.+.||+++++.++ .++++.+++++ +.++.+.++|
T Consensus 3 ~~~~V~V~lK~gVlDpqG~av~~al~~LG~~v~~VR~g-----K~~~l~~~~~~~~~a~~~v~~~~~~L 66 (85)
T 1gtd_A 3 FMVEVRIRLKKGMLNPEAATIERALALLGYEVEDTDTT-----DVITFTMDEDSLEAVEREVEDMCQRL 66 (85)
T ss_dssp EEEEEEEEECTTSCCHHHHHHHHHHHHHTCCCEEEEEE-----EEEEEEECCSCHHHHHHHHHHHHHHT
T ss_pred eEEEEEEEECCCCcCcHHHHHHHHHHHcCCChheEEEE-----EEEEEEecCCCHHHHHHHHHHHHHHh
Confidence 347889999999985 5667779999999988875 35888777652 3345555443
No 74
>1q5y_A NIKR, nickel responsive regulator; nickel binding, regulatory domain, beta sandwich, metal binding protein; 1.40A {Escherichia coli} SCOP: d.58.18.4 PDB: 3bkt_A 3bkf_A 3bku_A
Probab=67.51 E-value=32 Score=27.25 Aligned_cols=69 Identities=14% Similarity=0.007 Sum_probs=54.1
Q ss_pred EEEEEeCc-hhHHHHHHHHHhccCcceeeEEeee-cCCCcEEEEEEeCchhHHHHHHHHHhcCccEEEEEe
Q 015044 81 ISVFVRDE-SGVVDLIDEVFARRGYNIESLAVSG-NKDKGLFTIVVSGTDRVLQQVIEQLQKLVNVLKVED 149 (414)
Q Consensus 81 LSVlVeN~-pGVLsRItgLFsRRGyNIeSLtVg~-Ted~~iiTIVV~gde~~veQl~kQL~KLidVikV~d 149 (414)
|++..+++ .++-.|++.++....=.|.|-.=-+ .++.-+.+|++.|+-+.++.+..+|..+-.|..+.-
T Consensus 8 i~ivydh~~~~l~~~l~~iqh~~~d~I~s~~Hvhld~~~clEvivv~G~~~~I~~l~~~l~~~kGV~~~~L 78 (85)
T 1q5y_A 8 LSYVYEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRGVRHGHL 78 (85)
T ss_dssp EEEEEETTCHHHHHHHHHHHHHTGGGEEEEEEEECSSSEEEEEEEEEEEHHHHHHHHHHHHTSTTCEEEEE
T ss_pred EEEEEeCCchhHHHHHHHHHHhccCeEEEEEeeeeCCCcEEEEEEEEcCHHHHHHHHHHHhccCCeEEEeE
Confidence 77777877 6778899999998877666555444 445446888999999999999999999977776653
No 75
>2gru_A 2-deoxy-scyllo-inosose synthase; aminoglycoside, 2-deoxystreptamine, dehydroquinate synthase, lyase; HET: NAD EXO CAK; 2.15A {Bacillus circulans} PDB: 2d2x_A*
Probab=66.32 E-value=4.7 Score=39.63 Aligned_cols=80 Identities=16% Similarity=0.158 Sum_probs=57.2
Q ss_pred CeEEecccCcCCHHHHHHHHHHHHHcCCcee-eEeecC--ch-----HHHHHHHHhCC---CeEEEEEeCCCCCCCCcCC
Q 015044 280 TDVIIVLQHPSDYNVMQDAIAILCENDNICC-QVMKSY--TK-----KQLITKLSRSG---RKVIIATDHGVGAFLDKID 348 (414)
Q Consensus 280 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~~-~V~SaH--~p-----~~~~~~~~~~g---~~ViIavA~G~sa~Lp~~g 348 (414)
-++.||++....-...++..+.|++. +.+. .+.... ++ .+..+.+.+.| .+++||+=||...-+. +
T Consensus 35 ~k~liVtd~~v~~~~~~~v~~~L~~~-~~~~~~~~~~ge~~k~~~~v~~~~~~~~~~~~~r~d~iIalGGGsv~D~a--k 111 (368)
T 2gru_A 35 DQYIMISDSGVPDSIVHYAAEYFGKL-APVHILRFQGGEEYKTLSTVTNLQERAIALGANRRTAIVAVGGGLTGNVA--G 111 (368)
T ss_dssp SEEEEEEETTSCHHHHHHHHHHHTTT-SCEEEEEECCSGGGCSHHHHHHHHHHHHHTTCCTTEEEEEEESHHHHHHH--H
T ss_pred CEEEEEECCcHHHHHHHHHHHHHHhc-cceeEEEeCCCCCCCCHHHHHHHHHHHHhcCCCCCcEEEEECChHHHHHH--H
Confidence 37999999888777788888888765 6665 333322 22 44445556666 5999999977888888 8
Q ss_pred ccccC----ccEEEecCc
Q 015044 349 LLASG----SPVIGVPVR 362 (414)
Q Consensus 349 vvAg~----T~VIgVP~~ 362 (414)
.+|+. .++|.||+.
T Consensus 112 ~~Aa~~~rgip~i~IPTT 129 (368)
T 2gru_A 112 VAAGMMFRGIALIHVPTT 129 (368)
T ss_dssp HHHHHBTTCCEEEEEECS
T ss_pred HHHHHhcCCCCEEEECCc
Confidence 88863 229999994
No 76
>2wvf_A Hpnikr, putative nickel-responsive regulator; transcription factor, transcription regulation, RHH, DNA-binding, transcription, metal-binding; 1.60A {Helicobacter pylori} PDB: 2wvc_A 3pht_A 2ca9_A 2cad_A* 2caj_A 3lgh_A 2wvd_A 2wve_A* 2wvb_A 2y3y_A* 3qsi_B
Probab=65.33 E-value=32 Score=30.08 Aligned_cols=70 Identities=13% Similarity=0.102 Sum_probs=56.5
Q ss_pred EEEEEeCc-hhHHHHHHHHHhccCcceeeEEeee-cCCCcEEEEEEeCchhHHHHHHHHHhcCccEEEEEec
Q 015044 81 ISVFVRDE-SGVVDLIDEVFARRGYNIESLAVSG-NKDKGLFTIVVSGTDRVLQQVIEQLQKLVNVLKVEDF 150 (414)
Q Consensus 81 LSVlVeN~-pGVLsRItgLFsRRGyNIeSLtVg~-Ted~~iiTIVV~gde~~veQl~kQL~KLidVikV~dl 150 (414)
|++..+++ .++-.+++.+.....=.|.|-.=-+ .++..+.+|+|.|+-+.+..+..+|..+-.|..+...
T Consensus 68 i~ivydh~~~~l~~~l~~iqh~~~d~Iis~~Hvhld~~~clEvivv~G~~~~I~~l~~kl~~lkGV~~~kl~ 139 (148)
T 2wvf_A 68 LVVIYDGGQRELNQRMIDIQHASGTHVLCTTHIHMDEHNCLETIILQGNSFEIQRLQLEIGGLRGVKFAKLT 139 (148)
T ss_dssp EEEEEETTSTTHHHHHHHHHHHCSSEEEEEEEEECSSSEEEEEEEEEECHHHHHHHHHHHHTSTTEEEEEEE
T ss_pred EEEEEcCCchhHHHHHHHHHHhccCeEEEEeeEEcCCCCEEEEEEEEcCHHHHHHHHHHHhccCCeeEEEEE
Confidence 88888888 6788899999998877766554444 3444468899999999999999999999999888753
No 77
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=64.51 E-value=11 Score=37.57 Aligned_cols=43 Identities=19% Similarity=0.268 Sum_probs=32.0
Q ss_pred EEEEE---eCchhHHHHHHHHHhccCcceeeEEeeecCCCcEEEEEEeCc
Q 015044 81 ISVFV---RDESGVVDLIDEVFARRGYNIESLAVSGNKDKGLFTIVVSGT 127 (414)
Q Consensus 81 LSVlV---eN~pGVLsRItgLFsRRGyNIeSLtVg~Ted~~iiTIVV~gd 127 (414)
+|+.- .++||+++|+...|++.|+||+-++.+ +.-+.++|+.+
T Consensus 347 vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~~is~S----e~~is~vV~~~ 392 (421)
T 3ab4_A 347 VSLVGAGMKSHPGVTAEFMEALRDVNVNIELISTS----EIRISVLIRED 392 (421)
T ss_dssp EEEECGGGTSCTTHHHHHHHHHHHTTCCCCEEEEE----TTEEEEEEEGG
T ss_pred EEEEccCcccCccHHHHHHHHHHHCCCCEEEEEcC----CCeEEEEEeHH
Confidence 45444 379999999999999999999977622 23367777643
No 78
>1rwu_A Hypothetical UPF0250 protein YBED; mixed alpha-beta fold, structural genomics, protein structure initiative, PSI; NMR {Escherichia coli} SCOP: d.58.54.1
Probab=64.40 E-value=47 Score=27.91 Aligned_cols=64 Identities=22% Similarity=0.255 Sum_probs=50.3
Q ss_pred EEEEEeCchhHHHHHHHHHhcc---CcceeeEEeeecCCCcE--EEEEEe-CchhHHHHHHHHHhcCccEEEE
Q 015044 81 ISVFVRDESGVVDLIDEVFARR---GYNIESLAVSGNKDKGL--FTIVVS-GTDRVLQQVIEQLQKLVNVLKV 147 (414)
Q Consensus 81 LSVlVeN~pGVLsRItgLFsRR---GyNIeSLtVg~Ted~~i--iTIVV~-gde~~veQl~kQL~KLidVikV 147 (414)
+.+...+.++....|..+|.+. +|.+ ++-++....+ +||.+. .+.+.++.|-+.|.+.-.|+-|
T Consensus 39 ~KvIG~a~~~~~~~V~~vv~~~~p~d~~~---~~r~Ss~GkY~Svtv~v~v~S~eQv~aiY~~L~~~~~VkmV 108 (109)
T 1rwu_A 39 YKVMGQALPELVDQVVEVVQRHAPGDYTP---TVKPSSKGNYHSVSITINATHIEQVETLYEELGKIDIVRMV 108 (109)
T ss_dssp EEEEEECCTTHHHHHHHHHHHHSSSCCCE---EEEESSCSSEEEEEEEECCSSHHHHHHHHHHHSCSSSCEEE
T ss_pred EEEEEECcHHHHHHHHHHHHHhCCCCCCc---eecCCCCCeEEEEEEEEEECCHHHHHHHHHHHhcCCCEEEe
Confidence 9999999999999999999988 8887 4455555555 566554 3567899999999888777654
No 79
>1ta9_A Glycerol dehydrogenase; oxidoredu; 1.90A {Schizosaccharomyces pombe}
Probab=63.80 E-value=1.7 Score=44.29 Aligned_cols=80 Identities=16% Similarity=0.139 Sum_probs=56.7
Q ss_pred eEEecccCcCCHHHHHHHHHHHHHcCCcee-eEeecCchHHHHHH----HHhCCCeEEEEEeCCCCCCCCcCCccccCc-
Q 015044 281 DVIIVLQHPSDYNVMQDAIAILCENDNICC-QVMKSYTKKQLITK----LSRSGRKVIIATDHGVGAFLDKIDLLASGS- 354 (414)
Q Consensus 281 ~V~IimGS~SD~~v~~~a~~~L~~~gi~~~-~V~SaH~p~~~~~~----~~~~g~~ViIavA~G~sa~Lp~~gvvAg~T- 354 (414)
+|.||++..+.....++..+.|++-|+.+. .+.+-+.+.+.+++ +++ +.++|||+=||...-+. +.+|-+.
T Consensus 93 rvlIVtd~~~~~~~~~~v~~~L~~~gi~~~~~~~~ge~~~~~v~~~~~~~~~-~~D~IIAvGGGSviD~A--K~iA~~~g 169 (450)
T 1ta9_A 93 SAVVLADQNVWNICANKIVDSLSQNGMTVTKLVFGGEASLVELDKLRKQCPD-DTQVIIGVGGGKTMDSA--KYIAHSMN 169 (450)
T ss_dssp EEEEEEEHHHHHHTHHHHHHHHHHTTCEEEEEEECSCCCHHHHHHHHTTSCT-TCCEEEEEESHHHHHHH--HHHHHHTT
T ss_pred EEEEEECccHHHHHHHHHHHHHHHCCCeEEEEeeCCCCCHHHHHHHHHHHhh-CCCEEEEeCCcHHHHHH--HHHHHhcC
Confidence 799999887766678888999999999875 33333322333333 445 78999999866666677 6676432
Q ss_pred -cEEEecCcC
Q 015044 355 -PVIGVPVRA 363 (414)
Q Consensus 355 -~VIgVP~~~ 363 (414)
++|.||+..
T Consensus 170 iP~I~IPTTA 179 (450)
T 1ta9_A 170 LPSIICPTTA 179 (450)
T ss_dssp CCEEEEESSC
T ss_pred CCEEEEeCCC
Confidence 299999975
No 80
>2hza_A Nickel-responsive regulator; nickel-binding, ribbon-helix-helix, transcription factor, ME binding protein; HET: 3CM; 2.10A {Escherichia coli} SCOP: a.43.1.3 d.58.18.4 PDB: 1q5v_A* 2hzv_A 3od2_A*
Probab=63.67 E-value=40 Score=28.65 Aligned_cols=69 Identities=13% Similarity=-0.025 Sum_probs=56.0
Q ss_pred EEEEEeCc-hhHHHHHHHHHhccCcceeeEEeeec-CCCcEEEEEEeCchhHHHHHHHHHhcCccEEEEEe
Q 015044 81 ISVFVRDE-SGVVDLIDEVFARRGYNIESLAVSGN-KDKGLFTIVVSGTDRVLQQVIEQLQKLVNVLKVED 149 (414)
Q Consensus 81 LSVlVeN~-pGVLsRItgLFsRRGyNIeSLtVg~T-ed~~iiTIVV~gde~~veQl~kQL~KLidVikV~d 149 (414)
|++..+++ .++-.+++.+.....=.|.|-.=-+- ++..+.+|++.|+-+.+..+..+|..+-.|..+.-
T Consensus 56 i~ivydh~~~~l~~~l~~iqh~~~d~I~s~~hvhl~~~~clevivv~G~~~~I~~l~~~l~~~~GV~~~~l 126 (133)
T 2hza_A 56 LSYVYEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRGVRHGHL 126 (133)
T ss_dssp EEEEEESSTTSHHHHHHHHHHHTTTTEEEEEEEECSSSEEEEEEEEEEEHHHHHHHHHHHHHSTTEEEEEE
T ss_pred EEEEecCCchhHHHHHHHHHHhccCeEEEEeeEEcCCCcEEEEEEEEcCHHHHHHHHHHHhccCCeEEEee
Confidence 88888888 67888999999988877766554444 44446888999999999999999999988887764
No 81
>1sg6_A Pentafunctional AROM polypeptide; shikimate pathway, aromatic amino acid biosynthesis, DHQS, O form J, domain movement, cyclase, lyase; HET: NAD; 1.70A {Emericella nidulans} SCOP: e.22.1.1 PDB: 1nr5_A* 1nrx_A* 1nua_A 1nva_A* 1nvb_A* 1nvd_A* 1nve_A* 1nvf_A* 1dqs_A*
Probab=63.59 E-value=2.5 Score=41.94 Aligned_cols=80 Identities=14% Similarity=0.061 Sum_probs=58.6
Q ss_pred eEEecccCcCCHHHHHHHHHHHHHc------CCcee-eEeec---C-ch---HHHHHHHHhCC--C---eEEEEEeCCCC
Q 015044 281 DVIIVLQHPSDYNVMQDAIAILCEN------DNICC-QVMKS---Y-TK---KQLITKLSRSG--R---KVIIATDHGVG 341 (414)
Q Consensus 281 ~V~IimGS~SD~~v~~~a~~~L~~~------gi~~~-~V~Sa---H-~p---~~~~~~~~~~g--~---~ViIavA~G~s 341 (414)
++.||++.....-+.++..+.|++. |+.+. .+... + +. .+..+.+.+.| + ++|||+=||..
T Consensus 38 k~liVtd~~v~~~~~~~v~~~L~~~~~~~~~g~~~~~~~~~~gE~~k~~~~v~~~~~~~~~~~~~~~r~d~iIalGGGsv 117 (393)
T 1sg6_A 38 TYVLVTDTNIGSIYTPSFEEAFRKRAAEITPSPRLLIYNRPPGEVSKSRQTKADIEDWMLSQNPPCGRDTVVIALGGGVI 117 (393)
T ss_dssp EEEEEEEHHHHHHHHHHHHHHHHHHHHHSSSCCEEEEEEECSSGGGSSHHHHHHHHHHHHTSSSCCCTTCEEEEEESHHH
T ss_pred eEEEEECCcHHHHHHHHHHHHHHhhhccccCCceeEEEEeCCCCCCCCHHHHHHHHHHHHHcCCCCCCCCEEEEECCcHH
Confidence 7999998765544777888888876 77765 34433 3 22 55566677778 8 99999997788
Q ss_pred CCCCcCCccccC----ccEEEecCc
Q 015044 342 AFLDKIDLLASG----SPVIGVPVR 362 (414)
Q Consensus 342 a~Lp~~gvvAg~----T~VIgVP~~ 362 (414)
.-+. +.+|+. .++|.||+.
T Consensus 118 ~D~a--k~~Aa~~~rgip~i~IPTT 140 (393)
T 1sg6_A 118 GDLT--GFVASTYMRGVRYVQVPTT 140 (393)
T ss_dssp HHHH--HHHHHHGGGCCEEEEEECS
T ss_pred HHHH--HHHHHHhcCCCCEEEECCc
Confidence 8888 888863 229999995
No 82
>3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum}
Probab=62.94 E-value=11 Score=38.59 Aligned_cols=44 Identities=11% Similarity=0.194 Sum_probs=34.9
Q ss_pred EEEEE---eCchhHHHHHHHHHhccCcceeeEEeeecCCCcEEEEEEeC
Q 015044 81 ISVFV---RDESGVVDLIDEVFARRGYNIESLAVSGNKDKGLFTIVVSG 126 (414)
Q Consensus 81 LSVlV---eN~pGVLsRItgLFsRRGyNIeSLtVg~Ted~~iiTIVV~g 126 (414)
+|+.- .++||+..|+...+++.|+||.-++-|.+|.. +.++|+.
T Consensus 377 VSvVG~gM~~~~Gvaarif~aLa~~~InI~mIsqgtSei~--Is~vV~~ 423 (446)
T 3tvi_A 377 VATVGTGMAKTKGIANKIFTALSKENVNIRMIDQGSSEIN--VIVGVET 423 (446)
T ss_dssp EEEECGGGSSCTTHHHHHHHHHHHTTCCEEEEEECSCTTE--EEEEEEG
T ss_pred EEEECCCccCChhHHHHHHHHHHHCCCCEEEEEecCCCce--EEEEEcH
Confidence 66553 36999999999999999999999998866542 6666664
No 83
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4
Probab=62.92 E-value=26 Score=28.64 Aligned_cols=47 Identities=15% Similarity=0.157 Sum_probs=32.8
Q ss_pred HHHHHHHHHHcCCcee-eEeecCch-HHHHHHHHhCCCeEEEEEeCCCCC
Q 015044 295 MQDAIAILCENDNICC-QVMKSYTK-KQLITKLSRSGRKVIIATDHGVGA 342 (414)
Q Consensus 295 ~~~a~~~L~~~gi~~~-~V~SaH~p-~~~~~~~~~~g~~ViIavA~G~sa 342 (414)
.+++.+.++..|++++ .+.. ..+ ..+++..++.+++.||.+.+|+++
T Consensus 85 l~~~~~~~~~~g~~~~~~v~~-G~~~~~I~~~a~~~~~dlIV~G~~g~~~ 133 (162)
T 1mjh_A 85 MENIKKELEDVGFKVKDIIVV-GIPHEEIVKIAEDEGVDIIIMGSHGKTN 133 (162)
T ss_dssp HHHHHHHHHHTTCEEEEEEEE-ECHHHHHHHHHHHTTCSEEEEESCCSSC
T ss_pred HHHHHHHHHHcCCceEEEEcC-CCHHHHHHHHHHHcCCCEEEEcCCCCCC
Confidence 4445555666799887 5432 356 667777777889999999978764
No 84
>1oj7_A Hypothetical oxidoreductase YQHD; structural genomics; HET: NZQ; 2.0A {Escherichia coli} SCOP: e.22.1.2
Probab=62.30 E-value=3.6 Score=40.88 Aligned_cols=64 Identities=11% Similarity=0.004 Sum_probs=41.1
Q ss_pred CeEEecccCcCCHH--HHHHHHHHHHHcCCceeeEee--cC-ch---HHHHHHHHhCCCeEEEEEeCCCCCCCC
Q 015044 280 TDVIIVLQHPSDYN--VMQDAIAILCENDNICCQVMK--SY-TK---KQLITKLSRSGRKVIIATDHGVGAFLD 345 (414)
Q Consensus 280 ~~V~IimGS~SD~~--v~~~a~~~L~~~gi~~~~V~S--aH-~p---~~~~~~~~~~g~~ViIavA~G~sa~Lp 345 (414)
.++.||++..+-.. ..++..+.|+ |+.+..+-. .+ +. .+..+.+++.++++|||+=||..--+.
T Consensus 51 ~r~liVtd~~~~~~~g~~~~v~~~L~--g~~~~~f~~v~~~p~~~~v~~~~~~~~~~~~D~IIavGGGsviD~A 122 (408)
T 1oj7_A 51 ARVLITYGGGSVKKTGVLDQVLDALK--GMDVLEFGGIEPNPAYETLMNAVKLVREQKVTFLLAVGGGSVLDGT 122 (408)
T ss_dssp CEEEEEECSSHHHHHSHHHHHHHHTT--TSEEEEECCCCSSCBHHHHHHHHHHHHHHTCCEEEEEESHHHHHHH
T ss_pred CEEEEEECCchhhhccHHHHHHHHhC--CCEEEEeCCcCCCcCHHHHHHHHHHHHHcCCCEEEEeCCchHHHHH
Confidence 37999998765433 6777777776 776553322 23 22 445566777789999999855544444
No 85
>2dgb_A Hypothetical protein PURS; purine, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.10A {Thermus thermophilus} PDB: 2cuw_A
Probab=61.80 E-value=15 Score=29.21 Aligned_cols=45 Identities=18% Similarity=0.383 Sum_probs=34.5
Q ss_pred ccEEEEEEeCchhHHH----HHHHHHhccCcceeeEEeeecCCCcEEEEEEeCc
Q 015044 78 LRRISVFVRDESGVVD----LIDEVFARRGYNIESLAVSGNKDKGLFTIVVSGT 127 (414)
Q Consensus 78 MkrLSVlVeN~pGVLs----RItgLFsRRGyNIeSLtVg~Ted~~iiTIVV~gd 127 (414)
|.+..|.|..|||+|. .|.+-+.+.||+++++.++ .++++.+.++
T Consensus 3 m~~~~V~V~lK~gVlDpqG~av~~al~~LG~~v~~VR~g-----K~~~l~~~~~ 51 (84)
T 2dgb_A 3 RYQATLLIELKKGILDPQGRAVEGVLKDLGHPVEEVRVG-----KVLEIVFPAE 51 (84)
T ss_dssp EEEEEEEEEECTTSCCHHHHHHHHHHHHTTCCCSEEEEE-----EEEEEEEECS
T ss_pred ceEEEEEEEECCCCcChHHHHHHHHHHHCCCChhhEEEE-----EEEEEEecCC
Confidence 4458899999999985 5667789999998888775 3577777654
No 86
>3hl0_A Maleylacetate reductase; structur genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE NAD EPE; 1.60A {Agrobacterium tumefaciens str}
Probab=60.97 E-value=2.1 Score=42.09 Aligned_cols=79 Identities=10% Similarity=0.072 Sum_probs=53.6
Q ss_pred eEEecccCcCCHHHHHHHHHHHHHcCCcee-eEeecC-ch---HHHHHHHHhCCCeEEEEEeCCCCCCCCcCCccccCcc
Q 015044 281 DVIIVLQHPSDYNVMQDAIAILCENDNICC-QVMKSY-TK---KQLITKLSRSGRKVIIATDHGVGAFLDKIDLLASGSP 355 (414)
Q Consensus 281 ~V~IimGS~SD~~v~~~a~~~L~~~gi~~~-~V~SaH-~p---~~~~~~~~~~g~~ViIavA~G~sa~Lp~~gvvAg~T~ 355 (414)
+|.||++... ....++..+.|++.++.+- .| ..| +. .+..+.+++.++++|||+=||..--+. ..+|....
T Consensus 36 r~liVtd~~~-~~~~~~v~~~L~~~~~~v~~~v-~~~p~~~~v~~~~~~~~~~~~D~IIavGGGs~iD~a--K~iA~~~~ 111 (353)
T 3hl0_A 36 RALVLSTPQQ-KGDAEALASRLGRLAAGVFSEA-AMHTPVEVTKTAVEAYRAAGADCVVSLGGGSTTGLG--KAIALRTD 111 (353)
T ss_dssp CEEEECCGGG-HHHHHHHHHHHGGGEEEEECCC-CTTCBHHHHHHHHHHHHHTTCSEEEEEESHHHHHHH--HHHHHHHC
T ss_pred EEEEEecCch-hhHHHHHHHHHhhCCcEEecCc-CCCCcHHHHHHHHHHHhccCCCEEEEeCCcHHHHHH--HHHHhccC
Confidence 6889998764 5677888888887543221 22 133 22 455566777889999999966666666 66666543
Q ss_pred --EEEecCcC
Q 015044 356 --VIGVPVRA 363 (414)
Q Consensus 356 --VIgVP~~~ 363 (414)
+|.||+..
T Consensus 112 ~p~i~IPTTa 121 (353)
T 3hl0_A 112 AAQIVIPTTY 121 (353)
T ss_dssp CEEEEEECSS
T ss_pred CCEEEEeCCc
Confidence 99999865
No 87
>3mgj_A Uncharacterized protein MJ1480; saccharop_DH_N domain, NESG, structural genomics, PSI-2, protein structure initiative; 2.70A {Methanocaldococcus jannaschii}
Probab=60.16 E-value=15 Score=31.64 Aligned_cols=53 Identities=19% Similarity=0.365 Sum_probs=41.6
Q ss_pred hhHHHHHHHHHhccC--cceeeEEeeecC-CCcEEEEEEe-CchhHHHHHHHHHhcC
Q 015044 89 SGVVDLIDEVFARRG--YNIESLAVSGNK-DKGLFTIVVS-GTDRVLQQVIEQLQKL 141 (414)
Q Consensus 89 pGVLsRItgLFsRRG--yNIeSLtVg~Te-d~~iiTIVV~-gde~~veQl~kQL~KL 141 (414)
.|+|+|+-.+.-..| |.|..+.+|.+. +++...|.|. .|++.+++|..+|..|
T Consensus 15 Sgil~~~LD~I~d~GG~F~I~~f~vG~~k~d~SyA~l~V~a~d~e~L~~Il~~L~~l 71 (118)
T 3mgj_A 15 SLILPKVFDKILDMGGDYKVLEFEIGKRKTDPSYAKILVIGRDERHVDEILNELRDL 71 (118)
T ss_dssp SSHHHHHHHHHHHTTCEEEEEEEECCSSTTSCEEEEEEEEESSHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHhcCCCEEEEEEecCCCCCCcceEEEEEecCCHHHHHHHHHHHHHc
Confidence 589999998887655 899999999765 5566777665 4678899999988665
No 88
>2yx5_A UPF0062 protein MJ1593; anti parallel beta sheet, NPPSFA, national project on protei structural and functional analyses; 2.30A {Methanocaldococcus jannaschii}
Probab=60.07 E-value=8.5 Score=30.50 Aligned_cols=45 Identities=18% Similarity=0.476 Sum_probs=32.5
Q ss_pred ccEEEEEEeCchhHHH----HHHHHHhccCc-ceeeEEeeecCCCcEEEEEEeCc
Q 015044 78 LRRISVFVRDESGVVD----LIDEVFARRGY-NIESLAVSGNKDKGLFTIVVSGT 127 (414)
Q Consensus 78 MkrLSVlVeN~pGVLs----RItgLFsRRGy-NIeSLtVg~Ted~~iiTIVV~gd 127 (414)
|.+..|.|..|||+|. .|.+-+.+.|| +++++.++ .++++.++++
T Consensus 1 ~~~~~V~V~lK~gvlDpqG~av~~al~~lG~~~v~~Vr~g-----k~~~l~~~~~ 50 (83)
T 2yx5_A 1 MYKATVIIKLKKGVLNPEGRTIQRALNFLGFNNVKEVQTY-----KMIDIIMEGE 50 (83)
T ss_dssp CEEEEEEEEECTTCCCHHHHHHHHHHHHTTCTTCCCCCCC-----EEEEEEEC-C
T ss_pred CeEEEEEEEECCCCcCcHHHHHHHHHHHcCCCChhhEEEE-----EEEEEEecCC
Confidence 3447788999999985 56677889999 67766553 3588877765
No 89
>2zw2_A Putative uncharacterized protein STS178; purine metabolism, ligase; 1.55A {Sulfolobus tokodaii}
Probab=59.95 E-value=12 Score=30.26 Aligned_cols=54 Identities=15% Similarity=0.330 Sum_probs=38.9
Q ss_pred EEEEEEeCchhHHH----HHHHHHhccCc-ceeeEEeeecCCCcEEEEEEeCch-----hHHHHHHHHH
Q 015044 80 RISVFVRDESGVVD----LIDEVFARRGY-NIESLAVSGNKDKGLFTIVVSGTD-----RVLQQVIEQL 138 (414)
Q Consensus 80 rLSVlVeN~pGVLs----RItgLFsRRGy-NIeSLtVg~Ted~~iiTIVV~gde-----~~veQl~kQL 138 (414)
+..|.|..|||+|. .|.+.+.+.|| +++++.++ .++++.+++++ +.++.+.++|
T Consensus 7 ~~~V~V~lK~gVlDPqG~av~~al~~LG~~~V~~VR~g-----K~~~l~~~~~~~~~a~~~v~~~~~~L 70 (92)
T 2zw2_A 7 RVELIITNKEGVRDPEGETIQRYVVSRFSDKIIETRAG-----KYLVFRVNSSSQQEATELVKKLADEM 70 (92)
T ss_dssp EEEEEEEECTTSCCHHHHHHHHHTHHHHCTTEEEEEEE-----EEEEEEEECSSHHHHHHHHHHHHHHT
T ss_pred EEEEEEEECCCCcCcHHHHHHHHHHHcCCCChhheEEE-----EEEEEEecCCCHHHHHHHHHHHHhhc
Confidence 48899999999995 56788899999 69888875 35777776542 3344555444
No 90
>2j0w_A Lysine-sensitive aspartokinase 3; feedback inhibition, allosteric regulation, ACT domain, transferase, amino acid biosynthesis; HET: ADP; 2.5A {Escherichia coli} SCOP: c.73.1.3 d.58.18.10 d.58.18.10 PDB: 2j0x_A*
Probab=59.89 E-value=13 Score=37.86 Aligned_cols=93 Identities=17% Similarity=0.222 Sum_probs=64.3
Q ss_pred CchhHHHHHHHHHhccCcceeeEEeeecCCCcEEEEEEeCch-------hHHHHHHHHHhcCccEEEEEecCCchhhhee
Q 015044 87 DESGVVDLIDEVFARRGYNIESLAVSGNKDKGLFTIVVSGTD-------RVLQQVIEQLQKLVNVLKVEDFSNEPVIERE 159 (414)
Q Consensus 87 N~pGVLsRItgLFsRRGyNIeSLtVg~Ted~~iiTIVV~gde-------~~veQl~kQL~KLidVikV~dlt~~~~V~RE 159 (414)
+++|.+.||-..|++.|+||+-++.+ + .-++++++.++ +.++++.++|+++-+ =.+++.
T Consensus 320 ~~~g~~~~if~~l~~~~i~vd~i~ss--~--~sis~~v~~~~~~~~~~~~~~~~~~~el~~~~~----------v~~~~~ 385 (449)
T 2j0w_A 320 HSRGFLAEVFGILARHNISVDLITTS--E--VSVALTLDTTGSTSTGDTLLTQSLLMELSALCR----------VEVEEG 385 (449)
T ss_dssp CHHHHHHHHTTTTTTTTCCCSEEEEE--T--TEEEEEECCCCCSSTTCCSSCHHHHHHHHHHSC----------EEEEEE
T ss_pred CccCHHHHHHHHHHHcCCCEEEEEeC--C--CeEEEEEeccccchhhHHHHHHHHHHHhccCCe----------EEEeCC
Confidence 56899999999999999999999953 2 33777777532 367888888876222 123467
Q ss_pred eeEEEEecCccccccccCCHHHHHHHHHhhccCCcEEEe
Q 015044 160 LMLIKVNADPKFCAEVSGDPGKVAAVQRNSSTVGILEIA 198 (414)
Q Consensus 160 L~LiKV~~~~~~r~EvTG~~~KIdafi~~L~~fGIlEia 198 (414)
+++|-|--. .+.+.++-...+++.|....|.-++
T Consensus 386 ~a~vsvVG~-----gm~~~~gv~~~~f~aL~~ini~mIs 419 (449)
T 2j0w_A 386 LALVALIGN-----DLSKACGVGKEVFGVLEPFNIRMIC 419 (449)
T ss_dssp EEEEEEEES-----SCTTSSSHHHHHHSSCTTSCCCEEE
T ss_pred eEEEEEECC-----CccccccHHHHHHHHHhCCCeEEEE
Confidence 777766544 3445555666677888776665544
No 91
>3qbe_A 3-dehydroquinate synthase; shikimate pathway, mycobacte tuberculosis, nicotinamide adenine dinucleotide (NAD)-depen enzyme; 2.07A {Mycobacterium tuberculosis} PDB: 3qbd_A
Probab=59.38 E-value=4.1 Score=40.70 Aligned_cols=80 Identities=14% Similarity=0.148 Sum_probs=58.1
Q ss_pred CeEEecccCcCCHHHHHHHHHHHHHcCCcee-eEeecC--ch-----HHHHHHHHhCC---CeEEEEEeCCCCCCCCcCC
Q 015044 280 TDVIIVLQHPSDYNVMQDAIAILCENDNICC-QVMKSY--TK-----KQLITKLSRSG---RKVIIATDHGVGAFLDKID 348 (414)
Q Consensus 280 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~~-~V~SaH--~p-----~~~~~~~~~~g---~~ViIavA~G~sa~Lp~~g 348 (414)
-+|.||++....- ..++..+.|++-|+++. .+...- +| .+..+.+.+.| .+++||+=||...-+. +
T Consensus 44 ~rvlIVtd~~v~~-~~~~v~~~L~~~g~~~~~~~~~~gE~~kt~~~v~~~~~~l~~~~~~r~d~IIavGGGsv~D~a--k 120 (368)
T 3qbe_A 44 HKVAVVHQPGLAE-TAEEIRKRLAGKGVDAHRIEIPDAEAGKDLPVVGFIWEVLGRIGIGRKDALVSLGGGAATDVA--G 120 (368)
T ss_dssp SEEEEEECGGGHH-HHHHHHHHHHHTTCEEEEEECCSGGGGGBHHHHHHHHHHHHHHTCCTTCEEEEEESHHHHHHH--H
T ss_pred CEEEEEECccHHH-HHHHHHHHHHhcCCcceEEEeCCCCCCCCHHHHHHHHHHHHHcCCCCCcEEEEECChHHHHHH--H
Confidence 4799999988754 57888999999999887 443322 33 44444455444 5999999988888888 8
Q ss_pred ccccC----ccEEEecCc
Q 015044 349 LLASG----SPVIGVPVR 362 (414)
Q Consensus 349 vvAg~----T~VIgVP~~ 362 (414)
.+|+. .++|.||+.
T Consensus 121 ~~Aa~~~rgip~i~IPTT 138 (368)
T 3qbe_A 121 FAAATWLRGVSIVHLPTT 138 (368)
T ss_dssp HHHHHGGGCCEEEEEECS
T ss_pred HHHHHhccCCcEEEECCC
Confidence 88853 229999986
No 92
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=59.22 E-value=1.6 Score=38.81 Aligned_cols=90 Identities=21% Similarity=0.176 Sum_probs=12.2
Q ss_pred hhccccCCCCccccc-ccCCccc---------cCCCccccccEEEEEEeCchhHHHHHHHHHhccCcceeeEEeeecCCC
Q 015044 48 ASSRRAASKPVVCAT-IIDGAFS---------FSSTNRSELRRISVFVRDESGVVDLIDEVFARRGYNIESLAVSGNKDK 117 (414)
Q Consensus 48 ~~~~~~~~~p~~~~~-~~~~i~~---------~~~~~~~~MkrLSVlVeN~pGVLsRItgLFsRRGyNIeSLtVg~Ted~ 117 (414)
+...+...+|+.+.. ..-|+.. .+......|.++.+.+.+.+|.|.+++.++.+.|+++-++.....++.
T Consensus 98 m~~~~~~~lpVvd~~g~lvGiit~~Dil~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~~~~l~V~~~~~~~~ 177 (213)
T 1vr9_A 98 FLEHQEPYLPVVDEEMRLKGAVSLHDFLEALIEALAMDVPGIRFSVLLEDKPGELRKVVDALALSNINILSVITTRSGDG 177 (213)
T ss_dssp HHHCCCSEEEEECTTCBEEEEEEHHHHHHHHHHSCC--------------------------------------------
T ss_pred HHHhCCCEEEEEcCCCEEEEEEEHHHHHHHHHHHhcCCCCcEEEEEEeCCCCccHHHHHHHHHHCCCcEEEEEEEecCCC
Confidence 333355568988752 3334321 222223445567777789999999999999999999988766554442
Q ss_pred c-EEEEEEeCchhHHHHHHHHHh
Q 015044 118 G-LFTIVVSGTDRVLQQVIEQLQ 139 (414)
Q Consensus 118 ~-iiTIVV~gde~~veQl~kQL~ 139 (414)
. .+++-+.+ ..+..+++.|+
T Consensus 178 ~~~v~~~v~~--~~~~~i~~~le 198 (213)
T 1vr9_A 178 KREVLIKVDA--VDEGTLIKLFE 198 (213)
T ss_dssp -----------------------
T ss_pred EEEEEEEEcc--CCHHHHHHHHH
Confidence 2 25555553 24555666664
No 93
>2lqj_A Mg2+ transport protein; ACT domain, membrane protein, regulation, HYDR; NMR {Mycobacterium tuberculosis}
Probab=58.73 E-value=24 Score=28.66 Aligned_cols=68 Identities=12% Similarity=0.124 Sum_probs=54.3
Q ss_pred EEEEEeCchhHHHHHHHHHhccCcceeeEEeeecCCCc-E-E--EEEEe-CchhHHHHHHHHHhcCccEEEEEe
Q 015044 81 ISVFVRDESGVVDLIDEVFARRGYNIESLAVSGNKDKG-L-F--TIVVS-GTDRVLQQVIEQLQKLVNVLKVED 149 (414)
Q Consensus 81 LSVlVeN~pGVLsRItgLFsRRGyNIeSLtVg~Ted~~-i-i--TIVV~-gde~~veQl~kQL~KLidVikV~d 149 (414)
+.+--+++.-+...+...+.+.+|-+.+|...+.. ++ + | +++.. -+++.+++++.+|...-.|..|.=
T Consensus 13 Vic~~~~e~~vR~lL~~~L~~~~~~l~~l~s~~~~-~~~veI~A~L~at~~~~~~Le~iv~rLs~ep~V~~a~W 85 (94)
T 2lqj_A 13 VICRPKAETYVRAHIVQRTSSNDITLRGIRTGPAG-DDNITLTAHLLMVGHTPAKLERLVAELSLQPGVYAVHW 85 (94)
T ss_dssp EEECHHHHHHHHHHHHHHHHHHTEEEEEEEEEECS-SSCEEEEEEEEEESCCHHHHHHHHHHHHHSTTEEEEEE
T ss_pred EEECcHHHHHHHHHHHHHHhcCCCceeEeeeecCC-CCeEEEEEEEEecCCCHHHHHHHHHHHhCCCCeEEEEE
Confidence 55556778889999999999999999999977755 44 4 4 34433 467889999999999999988863
No 94
>2bj7_A Nickel responsive regulator; transcription, repressor, NIKR, DNA- binding, metal-binding, transcription regulation; HET: PG4; 2.1A {Pyrococcus horikoshii} SCOP: a.43.1.3 d.58.18.4 PDB: 2bj1_A 2bj3_A* 2bj8_A* 2bj9_A*
Probab=56.38 E-value=68 Score=27.39 Aligned_cols=69 Identities=19% Similarity=0.160 Sum_probs=55.7
Q ss_pred EEEEEeCch-hHHHHHHHHHhccCcceeeEEeeec-CCCcEEEEEEeCchhHHHHHHHHHhcCccEEEEEe
Q 015044 81 ISVFVRDES-GVVDLIDEVFARRGYNIESLAVSGN-KDKGLFTIVVSGTDRVLQQVIEQLQKLVNVLKVED 149 (414)
Q Consensus 81 LSVlVeN~p-GVLsRItgLFsRRGyNIeSLtVg~T-ed~~iiTIVV~gde~~veQl~kQL~KLidVikV~d 149 (414)
|++..+++. ++-.+++.+.....=.|.|-.=-+- ++..+.+|+|.|+-+.+..+..+|..+-.|..+.-
T Consensus 58 I~ivydh~~~~l~~~l~~iqh~~~d~I~s~~hvhl~~~~clevivv~G~~~~I~~l~~~l~~~~GV~~~~l 128 (138)
T 2bj7_A 58 ITIVYNHDEGDVVKALLDLQHEYLDEIISSLHVHMDEHNCLEVIVVKGEAKKIKMIADKLLSLKGVKHGKL 128 (138)
T ss_dssp EEEEEETTSTTHHHHHHHHHHHTTTTEEEEEEEECSSSEEEEEEEEEEEHHHHHHHHHHHHTSTTEEEEEE
T ss_pred EEEEecCcchhHHHHHHHHHHhccCeEEEEeeEEcCCCCEEEEEEEEcCHHHHHHHHHHHhccCCeeEEEE
Confidence 888888876 7788999999888777666544443 44446888999999999999999999998888765
No 95
>3jzd_A Iron-containing alcohol dehydrogenase; YP_298327.1, putative alcohol dehedrogenase, structural GENO joint center for structural genomics; HET: MSE NAD PG4 P6G PGE; 2.10A {Ralstonia eutropha}
Probab=54.17 E-value=2.7 Score=41.51 Aligned_cols=79 Identities=9% Similarity=0.099 Sum_probs=52.1
Q ss_pred eEEecccCcCCHHHHHHHHHHHHHcCCcee-eEeecC-ch---HHHHHHHHhCCCeEEEEEeCCCCCCCCcCCccccCcc
Q 015044 281 DVIIVLQHPSDYNVMQDAIAILCENDNICC-QVMKSY-TK---KQLITKLSRSGRKVIIATDHGVGAFLDKIDLLASGSP 355 (414)
Q Consensus 281 ~V~IimGS~SD~~v~~~a~~~L~~~gi~~~-~V~SaH-~p---~~~~~~~~~~g~~ViIavA~G~sa~Lp~~gvvAg~T~ 355 (414)
+|.||++... ....++..+.|++.++..- .| ..| +. .+.++.+++.++++|||+=||..--+. ..+|....
T Consensus 38 r~liVtd~~~-~~~~~~v~~~L~~~~~~~f~~v-~~~p~~~~v~~~~~~~~~~~~D~IIavGGGsviD~a--K~iA~~~~ 113 (358)
T 3jzd_A 38 RALVLCTPNQ-QAEAERIADLLGPLSAGVYAGA-VMHVPIESARDATARAREAGADCAVAVGGGSTTGLG--KAIALETG 113 (358)
T ss_dssp CEEEECCGGG-HHHHHHHHHHHGGGEEEEECCC-CTTCBHHHHHHHHHHHHHHTCSEEEEEESHHHHHHH--HHHHHHHC
T ss_pred eEEEEeCCcH-HHHHHHHHHHhccCCEEEecCC-cCCCCHHHHHHHHHHhhccCCCEEEEeCCcHHHHHH--HHHHhccC
Confidence 6889988765 5667777777776543211 11 233 22 445556677789999999966655666 66665533
Q ss_pred --EEEecCcC
Q 015044 356 --VIGVPVRA 363 (414)
Q Consensus 356 --VIgVP~~~ 363 (414)
+|.||+..
T Consensus 114 ~p~i~IPTT~ 123 (358)
T 3jzd_A 114 MPIVAIPTTY 123 (358)
T ss_dssp CCEEEEECSS
T ss_pred CCEEEEeCCc
Confidence 99999974
No 96
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0
Probab=51.92 E-value=30 Score=27.53 Aligned_cols=47 Identities=6% Similarity=0.058 Sum_probs=31.6
Q ss_pred HHHHHHHHHHcCC-cee-eEeecCch-HHHHH-HHHhCCCeEEEEEeCCCCC
Q 015044 295 MQDAIAILCENDN-ICC-QVMKSYTK-KQLIT-KLSRSGRKVIIATDHGVGA 342 (414)
Q Consensus 295 ~~~a~~~L~~~gi-~~~-~V~SaH~p-~~~~~-~~~~~g~~ViIavA~G~sa 342 (414)
.+++.+.+++.|+ +++ .+. ...+ ..+++ ..++.+++.||.+++|++.
T Consensus 71 l~~~~~~~~~~g~~~~~~~~~-~g~~~~~I~~~~a~~~~~dliV~G~~~~~~ 121 (146)
T 3s3t_A 71 MRQRQQFVATTSAPNLKTEIS-YGIPKHTIEDYAKQHPEIDLIVLGATGTNS 121 (146)
T ss_dssp HHHHHHHHTTSSCCCCEEEEE-EECHHHHHHHHHHHSTTCCEEEEESCCSSC
T ss_pred HHHHHHHHHhcCCcceEEEEe-cCChHHHHHHHHHhhcCCCEEEECCCCCCC
Confidence 3445555566788 777 443 2256 66777 6777789999999877664
No 97
>3c1m_A Probable aspartokinase; allosteric inhibition, threonine-sensitive, ACT DOMA amino-acid biosynthesis, threonine biosynthesis; HET: ANP; 2.30A {Methanocaldococcus jannaschii} PDB: 3c1n_A 3c20_A 2hmf_A*
Probab=51.25 E-value=12 Score=38.21 Aligned_cols=45 Identities=22% Similarity=0.274 Sum_probs=34.0
Q ss_pred EEEEEe---CchhHHHHHHHHHhccCcceeeEEeeecCCCcEEEEEEeCc
Q 015044 81 ISVFVR---DESGVVDLIDEVFARRGYNIESLAVSGNKDKGLFTIVVSGT 127 (414)
Q Consensus 81 LSVlVe---N~pGVLsRItgLFsRRGyNIeSLtVg~Ted~~iiTIVV~gd 127 (414)
+|+.-. ++||++.|+...+++.|+||.-++-+.+ +--+.++|+.+
T Consensus 407 vsvVG~gm~~~~Gvaak~f~aL~~~~InI~misqgtS--e~~Is~vV~~~ 454 (473)
T 3c1m_A 407 ISVVGAGMRGAKGIAGKIFTAVSESGANIKMIAQGSS--EVNISFVIDEK 454 (473)
T ss_dssp EEEECTTTTTCTTHHHHHHHHHHHHTCCCCEEEESSC--SSEEEEEEEGG
T ss_pred EEEEecCCCCChhHHHHHHHHHHHCCCCEEEEecCCC--CceEEEEEcHH
Confidence 555543 5899999999999999999988876655 23466777643
No 98
>1xah_A Sadhqs, 3-dehydroquinate synthase; shikimate pathway, aromatic amino acid biosynthesis, open form, form B, domain movement, cyclase; HET: NAD; 2.20A {Staphylococcus aureus} PDB: 1xag_A* 1xai_A* 1xaj_A* 1xal_A*
Probab=49.77 E-value=3.4 Score=40.27 Aligned_cols=80 Identities=15% Similarity=0.168 Sum_probs=50.4
Q ss_pred CeEEecccCcCCHHHHHHHHHHHHHcCCcee-eEeecC--ch-----HHHHHHHHhCCC---eEEEEEeCCCCCCCCcCC
Q 015044 280 TDVIIVLQHPSDYNVMQDAIAILCENDNICC-QVMKSY--TK-----KQLITKLSRSGR---KVIIATDHGVGAFLDKID 348 (414)
Q Consensus 280 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~~-~V~SaH--~p-----~~~~~~~~~~g~---~ViIavA~G~sa~Lp~~g 348 (414)
.++.||++........++..+.| +.| .++ .+...- .| .+..+.+.+.|+ ++|||+=||...-+. +
T Consensus 32 ~~~liVtd~~~~~~~~~~v~~~L-~~g-~~~~~~~~~~e~~p~~~~v~~~~~~~~~~~~~r~d~iIavGGGsv~D~a--k 107 (354)
T 1xah_A 32 DQSFLLIDEYVNQYFANKFDDIL-SYE-NVHKVIIPAGEKTKTFEQYQETLEYILSHHVTRNTAIIAVGGGATGDFA--G 107 (354)
T ss_dssp SCEEEEEEHHHHHHHHHHHC--------CEEEEEECSGGGGCSHHHHHHHHHHHHTTCCCTTCEEEEEESHHHHHHH--H
T ss_pred CeEEEEECCcHHHHHHHHHHHHH-hcC-CeEEEEECCCCCCCCHHHHHHHHHHHHHcCCCCCceEEEECChHHHHHH--H
Confidence 37899987655444666777777 667 555 333322 33 455666777788 899999977777788 8
Q ss_pred ccccC----ccEEEecCcC
Q 015044 349 LLASG----SPVIGVPVRA 363 (414)
Q Consensus 349 vvAg~----T~VIgVP~~~ 363 (414)
.+|+. .++|.||+..
T Consensus 108 ~vA~~~~rgip~i~IPTT~ 126 (354)
T 1xah_A 108 FVAATLLRGVHFIQVPTTI 126 (354)
T ss_dssp HHHHHBTTCCEEEEEECST
T ss_pred HHHHHhccCCCEEEECCcc
Confidence 88853 2299999964
No 99
>3mah_A Aspartokinase; aspartate kinase, structural genomics, MCSG, transferase, PSI-2; 2.31A {Porphyromonas gingivalis}
Probab=48.52 E-value=13 Score=31.90 Aligned_cols=38 Identities=16% Similarity=0.257 Sum_probs=27.7
Q ss_pred EeCchhHHHHHHHHHhccCcceeeEEeeecCCCcEEEEEEeC
Q 015044 85 VRDESGVVDLIDEVFARRGYNIESLAVSGNKDKGLFTIVVSG 126 (414)
Q Consensus 85 VeN~pGVLsRItgLFsRRGyNIeSLtVg~Ted~~iiTIVV~g 126 (414)
..++||+..|+...++ |+||.-++-+.+|. -++++++.
T Consensus 98 m~~~~gv~a~~f~aL~--~Ini~~isqg~Se~--~is~vv~~ 135 (157)
T 3mah_A 98 EWDNVGFEARIINALK--GVPVRMISYGGSNY--NVSVLVKA 135 (157)
T ss_dssp ----CCHHHHHHHTTT--TSCCSEEEECSSSS--CEEEEEEG
T ss_pred cccCccHHHHHHHHhC--CCCeEEEeeCCCCC--EEEEEEcH
Confidence 3579999999999999 99999998877654 25566653
No 100
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A*
Probab=47.79 E-value=44 Score=27.70 Aligned_cols=50 Identities=6% Similarity=0.023 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHcCCcee-eEeecC-ch-HHHHHHHHhCCCeEEEEEeCCCCC
Q 015044 293 NVMQDAIAILCENDNICC-QVMKSY-TK-KQLITKLSRSGRKVIIATDHGVGA 342 (414)
Q Consensus 293 ~v~~~a~~~L~~~gi~~~-~V~SaH-~p-~~~~~~~~~~g~~ViIavA~G~sa 342 (414)
...+++.+.+++.|++++ .+.-.+ .| ..+++.+++.+++.||.+++|.+.
T Consensus 78 ~~l~~~~~~~~~~g~~~~~~~~v~~G~~~~~I~~~a~~~~~DLIV~G~~g~~~ 130 (155)
T 3dlo_A 78 ETLSWAVSIIRKEGAEGEEHLLVRGKEPPDDIVDFADEVDAIAIVIGIRKRSP 130 (155)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEESSSCHHHHHHHHHHHTTCSEEEEECCEECT
T ss_pred HHHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHcCCCEEEECCCCCCC
Confidence 345556667777899888 544445 66 667777777789999998866644
No 101
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=46.40 E-value=23 Score=33.09 Aligned_cols=76 Identities=11% Similarity=-0.010 Sum_probs=46.7
Q ss_pred CeEEecccCcCCH-----HHHHHHHHHHHHcCCceeeEeecCchHHHHHHHHhCCCeEEEEEeCCCCCCCCcCCccccCc
Q 015044 280 TDVIIVLQHPSDY-----NVMQDAIAILCENDNICCQVMKSYTKKQLITKLSRSGRKVIIATDHGVGAFLDKIDLLASGS 354 (414)
Q Consensus 280 ~~V~IimGS~SD~-----~v~~~a~~~L~~~gi~~~~V~SaH~p~~~~~~~~~~g~~ViIavA~G~sa~Lp~~gvvAg~T 354 (414)
-+|+|++|+.|+. ..+..+++.|++.|+++..+-......+ .++...+++++-+.||.-+ .- |.++++.
T Consensus 14 ~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~g~~v~~i~~~~~~~~---~l~~~~~D~v~~~~hg~~g-e~--~~~~~~l 87 (317)
T 4eg0_A 14 GKVAVLFGGESAEREVSLTSGRLVLQGLRDAGIDAHPFDPAERPLS---ALKDEGFVRAFNALHGGYG-EN--GQIQGAL 87 (317)
T ss_dssp CEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTTTSCTT---HHHHTTCCEEEECCCSGGG-TS--SHHHHHH
T ss_pred ceEEEEECCCCCcceeeHHHHHHHHHHHHHCCCEEEEEeCCCchHH---HhhhcCCCEEEEcCCCCCC-ch--HHHHHHH
Confidence 3799999999983 4578888899999988765542222222 2334467887777767543 33 4444443
Q ss_pred cEEEecC
Q 015044 355 PVIGVPV 361 (414)
Q Consensus 355 ~VIgVP~ 361 (414)
.-.|+|.
T Consensus 88 e~~gip~ 94 (317)
T 4eg0_A 88 DFYGIRY 94 (317)
T ss_dssp HHHTCEE
T ss_pred HHcCCCe
Confidence 3334443
No 102
>2gm3_A Unknown protein; AT3G01520, putative ethylene-responsive protein, USP domain, nucleotide binding domain, AMP; HET: MSE AMP; 2.46A {Arabidopsis thaliana} SCOP: c.26.2.4
Probab=45.09 E-value=46 Score=27.63 Aligned_cols=48 Identities=10% Similarity=0.149 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHcCCcee-eEeecCch-HHHHHHHHhCCCeEEEEEeCCCCC
Q 015044 294 VMQDAIAILCENDNICC-QVMKSYTK-KQLITKLSRSGRKVIIATDHGVGA 342 (414)
Q Consensus 294 v~~~a~~~L~~~gi~~~-~V~SaH~p-~~~~~~~~~~g~~ViIavA~G~sa 342 (414)
..+++.+.++..|++++ .+.. ..+ ..+++.+++.+++.||.+++|+++
T Consensus 88 ~l~~~~~~~~~~g~~~~~~v~~-G~~~~~I~~~a~~~~~DLIVmG~~g~~~ 137 (175)
T 2gm3_A 88 LLEFFVNKCHEIGVGCEAWIKT-GDPKDVICQEVKRVRPDFLVVGSRGLGR 137 (175)
T ss_dssp HHHHHHHHHHHHTCEEEEEEEE-SCHHHHHHHHHHHHCCSEEEEEECCCC-
T ss_pred HHHHHHHHHHHCCCceEEEEec-CCHHHHHHHHHHHhCCCEEEEeCCCCCh
Confidence 34455556667899888 5542 255 566677777789999999988765
No 103
>1tdj_A Biosynthetic threonine deaminase; allostery, cooperative, tetramer, regulation, pyridoxal PHOS isoleucine biosynthesis; HET: PLP; 2.80A {Escherichia coli} SCOP: c.79.1.1 d.58.18.2 d.58.18.2
Probab=43.33 E-value=50 Score=34.38 Aligned_cols=109 Identities=16% Similarity=0.150 Sum_probs=73.5
Q ss_pred EEEEEeCchhHHHHHHHHHhccCcceeeEEeeecCCCc--EEEEEE--eCchhHHHHHHHHHhcCccEEEEEecCCchhh
Q 015044 81 ISVFVRDESGVVDLIDEVFARRGYNIESLAVSGNKDKG--LFTIVV--SGTDRVLQQVIEQLQKLVNVLKVEDFSNEPVI 156 (414)
Q Consensus 81 LSVlVeN~pGVLsRItgLFsRRGyNIeSLtVg~Ted~~--iiTIVV--~gde~~veQl~kQL~KLidVikV~dlt~~~~V 156 (414)
+++..-++||.|.+++.++. +-||..+.--.+ +.+ .+.+.+ .+..+.+++|++.|++-= ..+.|+++.+..
T Consensus 341 ~~v~~p~~pg~l~~~~~~l~--~~~i~~~~~~~~-~~~~~~~~~~~e~~~~~~~~~~~~~~l~~~g--~~~~~~~~~~~~ 415 (514)
T 1tdj_A 341 LAVTIPEEKGSFLKFCQLLG--GRSVTEFNYRFA-DAKNACIFVGVRLSRGLEERKEILQMLNDGG--YSVVDLSDDEMA 415 (514)
T ss_dssp EEEECCBSSSCSHHHHHTTS--SSEEEEEEEECC-CSSBCEEEEEEECSSTHHHHHHHHHHHTSSS--CEEETTSSCHHH
T ss_pred ccccCCCCCchHHHHHHHhC--CCceEEEEeecc-CCCeEEEEEEEEeCCcHHHHHHHHHHHHhCC--CCeEECCCCHHH
Confidence 88999999999999999998 688888776532 332 244444 443678999999998753 357899987765
Q ss_pred ---heeeeEEEEecCccc---cccccCCHHHHHHHHHhhcc-CCc
Q 015044 157 ---ERELMLIKVNADPKF---CAEVSGDPGKVAAVQRNSST-VGI 194 (414)
Q Consensus 157 ---~REL~LiKV~~~~~~---r~EvTG~~~KIdafi~~L~~-fGI 194 (414)
.|=|+==+-..-.++ |-|.--.|+-+-.|++.|.+ +.|
T Consensus 416 ~~h~~~~~g~~~~~~~~e~~~~~~fpe~~gal~~fl~~~~~~~~i 460 (514)
T 1tdj_A 416 KLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGTYWNI 460 (514)
T ss_dssp HHTGGGTCCCCCSSCCCCEEEEEECCCCTTHHHHHHHHHCSCCCC
T ss_pred HHHHHHhhCCcCccCCCceEEEEeCCCCCCHHHHHHHhcCCCceE
Confidence 222110000000111 22777889999999999995 555
No 104
>2obx_A DMRL synthase 1, 6,7-dimethyl-8-ribityllumazine synthase 1, riboflavin S; alpha-beta, transferase; HET: INI; 2.53A {Mesorhizobium loti}
Probab=43.13 E-value=51 Score=29.36 Aligned_cols=66 Identities=11% Similarity=0.010 Sum_probs=50.4
Q ss_pred CeEEecccCcCCH---HHHHHHHHHHHHcCCcee-----eEeecC-chHHHHHHHHhCCCeEEEEEeCCCCCCCCcCCcc
Q 015044 280 TDVIIVLQHPSDY---NVMQDAIAILCENDNICC-----QVMKSY-TKKQLITKLSRSGRKVIIATDHGVGAFLDKIDLL 350 (414)
Q Consensus 280 ~~V~IimGS~SD~---~v~~~a~~~L~~~gi~~~-----~V~SaH-~p~~~~~~~~~~g~~ViIavA~G~sa~Lp~~gvv 350 (414)
.+++||.+.-.+. .-.+.|.+.|++.|+..+ +|-++. -|.-..+-++..++|.+||.. -||
T Consensus 12 ~ri~IV~arfn~~I~~~Ll~gA~~~l~~~Gv~~~~i~v~~VPGafEiP~aa~~la~~~~yDavIaLG----------~VI 81 (157)
T 2obx_A 12 VRIAVVRARWHADIVDQCVSAFEAEMADIGGDRFAVDVFDVPGAYEIPLHARTLAETGRYGAVLGTA----------FVV 81 (157)
T ss_dssp EEEEEEEECTTHHHHHHHHHHHHHHHHHHHTTSEEEEEEEESSGGGHHHHHHHHHHHTCCSEEEEEE----------ECC
T ss_pred CEEEEEEeeCcHHHHHHHHHHHHHHHHHcCCCccceEEEECCcHHHHHHHHHHHHhcCCCCEEEEee----------ccc
Confidence 4799999998888 778889999999998753 566666 665444445556799999977 667
Q ss_pred ccCcc
Q 015044 351 ASGSP 355 (414)
Q Consensus 351 Ag~T~ 355 (414)
=|-|+
T Consensus 82 rG~T~ 86 (157)
T 2obx_A 82 NGGIY 86 (157)
T ss_dssp CCSSB
T ss_pred cCCCc
Confidence 67776
No 105
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0
Probab=43.06 E-value=52 Score=26.06 Aligned_cols=50 Identities=8% Similarity=0.018 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHcCCce---e-eEeecCch-HHHHHHHHhCCCeEEEEEeCCCCCC
Q 015044 293 NVMQDAIAILCENDNIC---C-QVMKSYTK-KQLITKLSRSGRKVIIATDHGVGAF 343 (414)
Q Consensus 293 ~v~~~a~~~L~~~gi~~---~-~V~SaH~p-~~~~~~~~~~g~~ViIavA~G~sa~ 343 (414)
...+++.+.+++.|+++ + .+. ...+ ..+++..++.+++.+|.+++|+++.
T Consensus 70 ~~l~~~~~~~~~~g~~~~~~~~~~~-~g~~~~~I~~~a~~~~~dliV~G~~~~~~~ 124 (147)
T 3hgm_A 70 EIAVQAKTRATELGVPADKVRAFVK-GGRPSRTIVRFARKRECDLVVIGAQGTNGD 124 (147)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEEEEE-ESCHHHHHHHHHHHTTCSEEEECSSCTTCC
T ss_pred HHHHHHHHHHHhcCCCccceEEEEe-cCCHHHHHHHHHHHhCCCEEEEeCCCCccc
Confidence 34556667778889998 5 333 2255 6677777777899999988776553
No 106
>1ujn_A Dehydroquinate synthase; riken structu genomics/proteomics initiative, RSGI, structural genomics,; 1.80A {Thermus thermophilus} SCOP: e.22.1.1
Probab=41.60 E-value=7.7 Score=37.87 Aligned_cols=78 Identities=10% Similarity=0.163 Sum_probs=52.7
Q ss_pred CeEEecccCcCCHHHHHHHHHHHHHcCCceeeEee--cC-ch---HHHHHHHHhCCC---eEEEEEeCCCCCCCCcCCcc
Q 015044 280 TDVIIVLQHPSDYNVMQDAIAILCENDNICCQVMK--SY-TK---KQLITKLSRSGR---KVIIATDHGVGAFLDKIDLL 350 (414)
Q Consensus 280 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~~~V~S--aH-~p---~~~~~~~~~~g~---~ViIavA~G~sa~Lp~~gvv 350 (414)
.+|.||++..... +.++..+.|+ +++. ..+-. .+ +. .+..+.+.+.++ ++|||+=||...-+. +.+
T Consensus 29 ~kvliVtd~~v~~-~~~~v~~~L~-~~~~-~~~~~ge~~~~~~~v~~~~~~~~~~~~~r~d~IIavGGGsv~D~a--k~~ 103 (348)
T 1ujn_A 29 GPAALLFDRRVEG-FAQEVAKALG-VRHL-LGLPGGEAAKSLEVYGKVLSWLAEKGLPRNATLLVVGGGTLTDLG--GFV 103 (348)
T ss_dssp SCEEEEEEGGGHH-HHHHHHHHHT-CCCE-EEECCSGGGSSHHHHHHHHHHHHHHTCCTTCEEEEEESHHHHHHH--HHH
T ss_pred CEEEEEECCcHHH-HHHHHHHHhc-cCeE-EEECCCCCCCCHHHHHHHHHHHHHcCCCCCCEEEEECCcHHHHHH--HHH
Confidence 3799999887666 7788777887 5654 22211 22 22 444455555554 899999977878888 888
Q ss_pred ccC----ccEEEecCc
Q 015044 351 ASG----SPVIGVPVR 362 (414)
Q Consensus 351 Ag~----T~VIgVP~~ 362 (414)
|+. .++|.||+.
T Consensus 104 A~~~~rgip~i~IPTT 119 (348)
T 1ujn_A 104 AATYLRGVAYLAFPTT 119 (348)
T ss_dssp HHHBTTCCEEEEEECS
T ss_pred HHHhccCCCEEEecCc
Confidence 863 239999995
No 107
>3idf_A USP-like protein; universal, stress, PSI, MCSG, structural genomics, midwest center for structural genomics structure initiative; 2.00A {Wolinella succinogenes}
Probab=41.48 E-value=1.2e+02 Score=23.81 Aligned_cols=51 Identities=8% Similarity=0.085 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHcCCcee-eEeecCch-HHHHHHHHhCCCeEEEEEeCCCCCCCCcCCcc
Q 015044 294 VMQDAIAILCENDNICC-QVMKSYTK-KQLITKLSRSGRKVIIATDHGVGAFLDKIDLL 350 (414)
Q Consensus 294 v~~~a~~~L~~~gi~~~-~V~SaH~p-~~~~~~~~~~g~~ViIavA~G~sa~Lp~~gvv 350 (414)
..+++.+.+++.|++++ .+.. ..+ ..+++..+ +++.+|.+++|++. +. ..+
T Consensus 67 ~l~~~~~~~~~~g~~~~~~v~~-g~~~~~I~~~a~--~~dliV~G~~~~~~-~~--~~~ 119 (138)
T 3idf_A 67 LTQKFSTFFTEKGINPFVVIKE-GEPVEMVLEEAK--DYNLLIIGSSENSF-LN--KIF 119 (138)
T ss_dssp HHHHHHHHHHTTTCCCEEEEEE-SCHHHHHHHHHT--TCSEEEEECCTTST-TS--SCC
T ss_pred HHHHHHHHHHHCCCCeEEEEec-CChHHHHHHHHh--cCCEEEEeCCCcch-HH--HHh
Confidence 34455566667789888 4432 256 44555554 89999999877654 44 445
No 108
>2cz4_A Hypothetical protein TTHA0516; conserved hypothetical protein, PII-like signaling protein, structural genomics, NPPSFA; 1.93A {Thermus thermophilus} SCOP: d.58.5.1
Probab=40.81 E-value=1.1e+02 Score=25.71 Aligned_cols=72 Identities=18% Similarity=0.290 Sum_probs=47.3
Q ss_pred ccccEEEEEEeCchhHHHHHHHHHhccCcceeeEEeeecCCC-------------cE-EEEEEeCchhHHHHHHHHHh--
Q 015044 76 SELRRISVFVRDESGVVDLIDEVFARRGYNIESLAVSGNKDK-------------GL-FTIVVSGTDRVLQQVIEQLQ-- 139 (414)
Q Consensus 76 ~~MkrLSVlVeN~pGVLsRItgLFsRRGyNIeSLtVg~Ted~-------------~i-iTIVV~gde~~veQl~kQL~-- 139 (414)
.+||.|.+++ +|..+++|...+.+.|+ ..+||.+..-. .+ +.+++ +|+.++++++.|.
T Consensus 23 ~~mK~I~aII--r~~k~e~V~~aL~~~Gi--~G~TV~~V~G~G~q~~~t~~~~g~kv~IeiVv--~de~ve~vv~~I~~~ 96 (119)
T 2cz4_A 23 VPLKLVTIVA--ESLLEKRLVEEVKRLGA--KGYTITPARGEGSRGIRSVDWEGQNIRLETIV--SEEVALRILQRLQEE 96 (119)
T ss_dssp EEEEEEEEEE--EGGGHHHHHHHHHHTTC--CCCEEEEEBCTTCCCTTCSCSTTCEEEEEEEE--CHHHHHHHHHHHHHH
T ss_pred CCcEEEEEEE--CHHHHHHHHHHHHhCCC--CcEEEcCCEEecCCCCccccccCCCEEEEEEE--CHHHHHHHHHHHHHH
Confidence 4577788888 49999999999999976 56666443211 12 44444 3556777777666
Q ss_pred ------cCccEEEEEecCCc
Q 015044 140 ------KLVNVLKVEDFSNE 153 (414)
Q Consensus 140 ------KLidVikV~dlt~~ 153 (414)
-++.|..|+.+..+
T Consensus 97 ~~tg~~GkIFV~~VeV~r~~ 116 (119)
T 2cz4_A 97 YFPHYAVIAYVENVWVVRGE 116 (119)
T ss_dssp TTTTSCCEEEEEEEEEETGG
T ss_pred hcCCCCEEEEEEEeEEEecc
Confidence 34556666655443
No 109
>2h9z_A Hypothetical protein HP0495; feredoxin-like (beta-alpha-beta-BETA-alpha-beta), structural genomics, unknown function; NMR {Helicobacter pylori} SCOP: d.58.54.2 PDB: 2joq_A
Probab=40.59 E-value=43 Score=26.73 Aligned_cols=64 Identities=13% Similarity=0.340 Sum_probs=45.9
Q ss_pred EEEEEeCchh-HHHHHHHHHhccCcceeeEEeeecCCCcE--EEEEEe-CchhHHHHHHHHHhcCccEEEE
Q 015044 81 ISVFVRDESG-VVDLIDEVFARRGYNIESLAVSGNKDKGL--FTIVVS-GTDRVLQQVIEQLQKLVNVLKV 147 (414)
Q Consensus 81 LSVlVeN~pG-VLsRItgLFsRRGyNIeSLtVg~Ted~~i--iTIVV~-gde~~veQl~kQL~KLidVikV 147 (414)
+.+...++++ ....|..+| +|++.++. .-++....+ +|+.+. .+++.++.+-+.|.+.-.|.-|
T Consensus 18 ~Kvig~~~~~~~~~~V~~v~-~~~~~~~~--~r~Ss~GkY~Svtv~i~a~s~eq~~~iY~~L~~~~~Vk~v 85 (86)
T 2h9z_A 18 YRVIMTTKDTSTLKELLETY-QRPFKLEF--KNTSKNAKFYSFNVSMEVSNESERNEIFQKISQLDKVVQT 85 (86)
T ss_dssp EEEEECCSCTHHHHHHSTTC-CSSEECCB--SCSSCCSSCEEEEEEEECCSHHHHHHHHHHHTCSSCEEEE
T ss_pred EEEEEECCcHHHHHHHHHHH-hccCCCcc--cccCCCCeEEEEEEEEEECCHHHHHHHHHHHhcCCCEEEe
Confidence 8899999999 999999999 77886532 122222223 555543 3577899999999988777654
No 110
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii}
Probab=38.51 E-value=84 Score=25.81 Aligned_cols=49 Identities=8% Similarity=0.049 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHcCCceee--EeecCch-HHHHHHHHhCCCeEEEEEeCCCCC
Q 015044 294 VMQDAIAILCENDNICCQ--VMKSYTK-KQLITKLSRSGRKVIIATDHGVGA 342 (414)
Q Consensus 294 v~~~a~~~L~~~gi~~~~--V~SaH~p-~~~~~~~~~~g~~ViIavA~G~sa 342 (414)
..+++.+.++..|++++. ..-...+ ..+++.+++.+++.||.+.+|.+.
T Consensus 79 ~l~~~~~~~~~~g~~~~~~~~~~~g~~~~~I~~~a~~~~~DlIV~G~~g~~~ 130 (170)
T 2dum_A 79 KLQEKAEEVKRAFRAKNVRTIIRFGIPWDEIVKVAEEENVSLIILPSRGKLS 130 (170)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEEEEECHHHHHHHHHHHTTCSEEEEESCCCCC
T ss_pred HHHHHHHHHHHcCCceeeeeEEecCChHHHHHHHHHHcCCCEEEECCCCCCc
Confidence 344555566667888763 3322266 667777777789999999877764
No 111
>2cvi_A 75AA long hypothetical regulatory protein ASNC; structural genomics, unknown function; 1.50A {Pyrococcus horikoshii} PDB: 2z4p_A 2e1a_A
Probab=38.40 E-value=1.2e+02 Score=22.68 Aligned_cols=67 Identities=15% Similarity=0.158 Sum_probs=48.9
Q ss_pred EEEEEeCchhHHHHHHHHHhcCccEEEEEecCCchhhheeeeEEEEecCccccccccCCHHHHHHHHH-hhccCCcEEEe
Q 015044 120 FTIVVSGTDRVLQQVIEQLQKLVNVLKVEDFSNEPVIERELMLIKVNADPKFCAEVSGDPGKVAAVQR-NSSTVGILEIA 198 (414)
Q Consensus 120 iTIVV~gde~~veQl~kQL~KLidVikV~dlt~~~~V~REL~LiKV~~~~~~r~EvTG~~~KIdafi~-~L~~fGIlEia 198 (414)
+.|.+.. ...+++.++|.++-+|..+...+.+.. .|+||.+. +.+.++.|+. .|..++=+.-+
T Consensus 6 v~v~~~~--~~~~~~~~~l~~~peV~e~~~vtG~~D-----~ll~v~~~---------d~~~l~~~i~~~l~~~~gV~~~ 69 (83)
T 2cvi_A 6 ILMVTAA--GKEREVMEKLLAMPEVKEAYVVYGEYD-----LIVKVETD---------TLKDLDQFITEKIRKMPEIQMT 69 (83)
T ss_dssp EEEEECT--TCHHHHHHHHHTSTTEEEEEECBSSCS-----EEEEEEES---------SHHHHHHHHHTTGGGCTTEEEE
T ss_pred EEEEEcC--CCHHHHHHHHhCCCCeeEEEEEcccCC-----EEEEEEEC---------CHHHHHHHHHHHhccCCCEeEE
Confidence 3444443 346899999999999999999997643 35677553 6788999996 88888655556
Q ss_pred cccc
Q 015044 199 RTGK 202 (414)
Q Consensus 199 RTG~ 202 (414)
+|-.
T Consensus 70 ~T~i 73 (83)
T 2cvi_A 70 STMI 73 (83)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6643
No 112
>1ejb_A Lumazine synthase; analysis, inhibitor complex, vitamin biosynthesis transferase; HET: INJ; 1.85A {Saccharomyces cerevisiae} SCOP: c.16.1.1 PDB: 2jfb_A
Probab=38.35 E-value=24 Score=31.95 Aligned_cols=112 Identities=14% Similarity=0.032 Sum_probs=72.2
Q ss_pred CeEEecccCcCCH---HHHHHHHHHHHHcCCcee-----eEeecC-chHHHHHHHH-----hCCCeEEEEEeCCCCCCCC
Q 015044 280 TDVIIVLQHPSDY---NVMQDAIAILCENDNICC-----QVMKSY-TKKQLITKLS-----RSGRKVIIATDHGVGAFLD 345 (414)
Q Consensus 280 ~~V~IimGS~SD~---~v~~~a~~~L~~~gi~~~-----~V~SaH-~p~~~~~~~~-----~~g~~ViIavA~G~sa~Lp 345 (414)
.+++||.+.-.+. .-.+.|.+.|++.|+..+ .|-++. -|.-..+-++ ..++|.+||..
T Consensus 17 ~ri~IV~arfn~~I~~~Ll~gA~~~L~~~Gv~~~~i~v~~VPGafEiP~aak~la~~~~~~~~~yDavIaLG-------- 88 (168)
T 1ejb_A 17 IRVGIIHARWNRVIIDALVKGAIERMASLGVEENNIIIETVPGSYELPWGTKRFVDRQAKLGKPLDVVIPIG-------- 88 (168)
T ss_dssp CCEEEEECCTTHHHHHHHHHHHHHHHHHTTCCGGGEEEEECSSGGGHHHHHHHHHHHHHHTTCCCSEEEEEE--------
T ss_pred CEEEEEEEeCcHHHHHHHHHHHHHHHHHcCCCccceEEEECCcHHHHHHHHHHHHhhccccCCCcCEEEEec--------
Confidence 5799999998888 778899999999998643 556666 5533332233 34689999977
Q ss_pred cCCccccCcc---EEEecCcCCCCCCccee-e-ccCCCCCeEEEEe--------c---------CCcchHHHHHHHHHhc
Q 015044 346 KIDLLASGSP---VIGVPVRASGVTGFPHQ-F-VEMCPKHAILLVP--------V---------NDAKGAARQAMIICDM 403 (414)
Q Consensus 346 ~~gvvAg~T~---VIgVP~~~~~l~G~daL-l-vqMP~GvpVatV~--------I---------d~~~nAA~~A~~IL~~ 403 (414)
-||=|-|+ .|.==++ .|+--+ | -..|-+..|.|+. . |.|..||..|.+++.+
T Consensus 89 --~VIrG~T~Hfd~Va~~vs----~Gl~~vsL~~~vPV~~GVLT~~~~eQA~~Rag~~~~~~~~nkG~eaA~aAlem~~l 162 (168)
T 1ejb_A 89 --VLIKGSTMHFEYISDSTT----HALMNLQEKVDMPVIFGLLTCMTEEQALARAGIDEAHSMHNHGEDWGAAAVEMAVK 162 (168)
T ss_dssp --EEECCSSSHHHHHHHHHH----HHHHHHHHHHTSCBCCEEEEESSHHHHHHHBTCSTTCCSCBHHHHHHHHHHHHHHH
T ss_pred --ccccCCchHHHHHHHHHH----HHHHHHHhhcCCCEEEEEecCCCHHHHHHhcCccccccccchHHHHHHHHHHHHHH
Confidence 67777776 3321111 121111 1 3445444556654 1 4578899999998866
Q ss_pred cC
Q 015044 404 VH 405 (414)
Q Consensus 404 ~~ 405 (414)
..
T Consensus 163 ~~ 164 (168)
T 1ejb_A 163 FG 164 (168)
T ss_dssp HS
T ss_pred hc
Confidence 43
No 113
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa}
Probab=37.87 E-value=2.3e+02 Score=25.50 Aligned_cols=54 Identities=13% Similarity=0.087 Sum_probs=39.7
Q ss_pred cCCHHHHHHHHHHHHHcCCcee-eEeecCch-HHHHHHHHhCCCeEEEEEeCCCCC
Q 015044 289 PSDYNVMQDAIAILCENDNICC-QVMKSYTK-KQLITKLSRSGRKVIIATDHGVGA 342 (414)
Q Consensus 289 ~SD~~v~~~a~~~L~~~gi~~~-~V~SaH~p-~~~~~~~~~~g~~ViIavA~G~sa 342 (414)
.......+++.+.+...|++++ .+...+.+ ..+++..+..+++.+|.+.+|.+.
T Consensus 47 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~a~~~~~dliV~G~~~~~~ 102 (290)
T 3mt0_A 47 RDHSAALNDLAQELREEGYSVSTNQAWKDSLHQTIIAEQQAEGCGLIIKQHFPDNP 102 (290)
T ss_dssp SCCHHHHHHHHHHHHHTTCCEEEEEECSSSHHHHHHHHHHHHTCSEEEEECCCSCT
T ss_pred HHHHHHHHHHHHHHhhCCCeEEEEEEeCCCHHHHHHHHHHhcCCCEEEEecccCCc
Confidence 4456678888888889999988 55533466 556666666789999998877654
No 114
>3fg9_A Protein of universal stress protein USPA family; APC60691, nucleotide- binding, lactobacillus plantarum WCFS1, structural genomics PSI-2; 1.47A {Lactobacillus plantarum}
Probab=37.84 E-value=69 Score=25.91 Aligned_cols=50 Identities=4% Similarity=0.022 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHcCCc-ee-eEeecCch-HHHHHH-HHhCCCeEEEEEeCCCCCC
Q 015044 294 VMQDAIAILCENDNI-CC-QVMKSYTK-KQLITK-LSRSGRKVIIATDHGVGAF 343 (414)
Q Consensus 294 v~~~a~~~L~~~gi~-~~-~V~SaH~p-~~~~~~-~~~~g~~ViIavA~G~sa~ 343 (414)
..+++.+.+++.|++ ++ .+.....| ..+++. .++.+++.||.+++|+++.
T Consensus 80 ~l~~~~~~~~~~g~~~~~~~v~~~g~~~~~I~~~~a~~~~~DlIV~G~~g~~~~ 133 (156)
T 3fg9_A 80 VVAEYVQLAEQRGVNQVEPLVYEGGDVDDVILEQVIPEFKPDLLVTGADTEFPH 133 (156)
T ss_dssp HHHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHTHHHHHCCSEEEEETTCCCTT
T ss_pred HHHHHHHHHHHcCCCceEEEEEeCCCHHHHHHHHHHHhcCCCEEEECCCCCCcc
Confidence 344455556677994 77 55543566 667776 6777899999999776653
No 115
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis}
Probab=37.35 E-value=2.3e+02 Score=25.52 Aligned_cols=47 Identities=11% Similarity=0.099 Sum_probs=29.8
Q ss_pred HHHHHHHHHcCCcee-eEeecCch-HHHHHHHHhCCCeEEEEEeCCCCC
Q 015044 296 QDAIAILCENDNICC-QVMKSYTK-KQLITKLSRSGRKVIIATDHGVGA 342 (414)
Q Consensus 296 ~~a~~~L~~~gi~~~-~V~SaH~p-~~~~~~~~~~g~~ViIavA~G~sa 342 (414)
+++.+.+..-|++++ .+...+.+ ..+++..++.+++.+|.+.+|.+.
T Consensus 76 ~~~~~~~~~~~v~~~~~~~~~g~~~~~i~~~a~~~~~DLiV~G~~g~~~ 124 (319)
T 3olq_A 76 KQQARYYLEAGIQIDIKVIWHNRPYEAIIEEVITDKHDLLIKMAHQHDK 124 (319)
T ss_dssp HHHHHHHHHTTCCEEEEEEECSCHHHHHHHHHHHHTCSEEEEEEBCC--
T ss_pred HHHHHHHhhcCCeEEEEEEecCChHHHHHHHHHhcCCCEEEEecCcCch
Confidence 334444455689888 55434466 556666666678999998877654
No 116
>3clh_A 3-dehydroquinate synthase; shikimate pathway, aromatic amino acid biosynthesis, DHQS, amino-acid biosynthesis, cytoplasm, lyase, NAD; HET: NAD; 2.40A {Helicobacter pylori}
Probab=36.80 E-value=2.2 Score=41.65 Aligned_cols=81 Identities=14% Similarity=0.133 Sum_probs=50.3
Q ss_pred CeEEecccCcCCHHHHHHHHHHHHHcCCceeeEeec--C-ch---HHHHHHHHhCCC---eEEEEEeCCCCCCCCcCCcc
Q 015044 280 TDVIIVLQHPSDYNVMQDAIAILCENDNICCQVMKS--Y-TK---KQLITKLSRSGR---KVIIATDHGVGAFLDKIDLL 350 (414)
Q Consensus 280 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~~~V~Sa--H-~p---~~~~~~~~~~g~---~ViIavA~G~sa~Lp~~gvv 350 (414)
.++.||++........++..+.|++.++.+..+-.. | +. .+..+.+.+.|+ ++|||+=||...-+. +.+
T Consensus 27 ~~~livtd~~v~~~~~~~v~~~L~~~~~~~~~~~~~e~~k~~~~v~~~~~~~~~~~~~r~d~iIavGGGsv~D~a--k~~ 104 (343)
T 3clh_A 27 QKALIISDSIVAGLHLPYLLERLKALEVRVCVIESGEKYKNFHSLERILNNAFEMQLNRHSLMIALGGGVISDMV--GFA 104 (343)
T ss_dssp SCEEEEEEHHHHTTTHHHHHTTEECSCEEEEEECSSGGGCSHHHHHHHHHHHHHTTCCTTCEEEEEESHHHHHHH--HHH
T ss_pred CEEEEEECCcHHHHHHHHHHHHHHhCCcEEEEeCCCCCCCCHHHHHHHHHHHHhcCCCCCceEEEECChHHHHHH--HHH
Confidence 378999876543334455444444333332222121 2 22 555666777788 999999977777888 888
Q ss_pred ccCc----cEEEecCc
Q 015044 351 ASGS----PVIGVPVR 362 (414)
Q Consensus 351 Ag~T----~VIgVP~~ 362 (414)
|+.. ++|.||+.
T Consensus 105 A~~~~rgip~i~IPTT 120 (343)
T 3clh_A 105 SSIYFRGIDFINIPTT 120 (343)
T ss_dssp HHHBTTCCEEEEEECS
T ss_pred HHHhccCCCEEEeCCc
Confidence 7532 29999987
No 117
>3nq4_A 6,7-dimethyl-8-ribityllumazine synthase; 30MER, icosahedral, flavodoxin like fold, transferase, DMRL riboflavin biosynthesis, drug targe; 3.50A {Salmonella typhimurium} PDB: 3mk3_A
Probab=36.22 E-value=1.2e+02 Score=27.02 Aligned_cols=109 Identities=14% Similarity=0.167 Sum_probs=71.1
Q ss_pred CeEEecccCcCCH---HHHHHHHHHHHHcC-Cc---ee--eEeecC-chHHHHHHHHhCCCeEEEEEeCCCCCCCCcCCc
Q 015044 280 TDVIIVLQHPSDY---NVMQDAIAILCEND-NI---CC--QVMKSY-TKKQLITKLSRSGRKVIIATDHGVGAFLDKIDL 349 (414)
Q Consensus 280 ~~V~IimGS~SD~---~v~~~a~~~L~~~g-i~---~~--~V~SaH-~p~~~~~~~~~~g~~ViIavA~G~sa~Lp~~gv 349 (414)
.+++||.+.-.+. .-.+.|.+.|++.| +. .+ +|-++. -|.-..+-++...+|.+||.. -|
T Consensus 13 ~ri~IV~arfn~~I~~~Ll~gA~~~l~~~G~v~~~~i~v~~VPGafEiP~aa~~la~~~~yDavIaLG----------~V 82 (156)
T 3nq4_A 13 ARVAITIARFNQFINDSLLDGAVDALTRIGQVKDDNITVVWVPGAYELPLATEALAKSGKYDAVVALG----------TV 82 (156)
T ss_dssp CCEEEEEESTTHHHHHHHHHHHHHHHHHTTCCCTTSEEEEEESSTTTHHHHHHHHHHHCSCSEEEEEE----------EE
T ss_pred CEEEEEEeeCcHHHHHHHHHHHHHHHHHcCCCcccceEEEEcCcHHHHHHHHHHHHhcCCCCEEEEee----------ee
Confidence 4799999998888 77889999999999 74 33 777777 665554445566789999977 67
Q ss_pred cccCcc---EEEecCcCCCCCCcceeeccCCCCCe----EEEEe-------------cCCcchHHHHHHHHHhcc
Q 015044 350 LASGSP---VIGVPVRASGVTGFPHQFVEMCPKHA----ILLVP-------------VNDAKGAARQAMIICDMV 404 (414)
Q Consensus 350 vAg~T~---VIgVP~~~~~l~G~daLlvqMP~Gvp----VatV~-------------Id~~~nAA~~A~~IL~~~ 404 (414)
|=|-|+ .|.==++ .|+-- +++=.|+| |.|+. -|.|..||..|.+++.+.
T Consensus 83 IrG~T~Hfd~Va~~v~----~Gl~~--v~L~~~vPV~~GVLT~~~~eQA~~Rag~~~~nKG~eaA~aalem~~l~ 151 (156)
T 3nq4_A 83 IRGGTAHFEYVAGGAS----NGLAS--VAQDSGVPVAFGVLTTESIEQAIERAGTKAGNKGAEAALTALEMINVL 151 (156)
T ss_dssp ECCSSTHHHHHHHHHH----HHHHH--HHHHHCCCEEEEEEEESCHHHHHHHBTSTTCBHHHHHHHHHHHHHHHH
T ss_pred ecCCchHHHHHHHHHH----HHHHH--HHhccCCCEEEEEeCCCCHHHHHHHhCCcccccHHHHHHHHHHHHHHH
Confidence 777776 3321111 12111 33323333 44441 124677899999888764
No 118
>2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10
Probab=35.71 E-value=32 Score=35.66 Aligned_cols=56 Identities=16% Similarity=0.267 Sum_probs=39.0
Q ss_pred EEEEEe--CchhHHHHHHHHHhccCcceeeEEeeecCCCcEEEEEEeCc--hhHHHHHHHHH
Q 015044 81 ISVFVR--DESGVVDLIDEVFARRGYNIESLAVSGNKDKGLFTIVVSGT--DRVLQQVIEQL 138 (414)
Q Consensus 81 LSVlVe--N~pGVLsRItgLFsRRGyNIeSLtVg~Ted~~iiTIVV~gd--e~~veQl~kQL 138 (414)
+|+.-. ++||+..|+...+++.|+||.-++-|.+|. -|.++|+.+ ++.++.|-+.+
T Consensus 423 VsiVG~m~~~~Gvaa~~f~aL~~~~InI~mIsqGsSei--~Is~vV~~~d~~~Av~aLH~~f 482 (510)
T 2cdq_A 423 ISLIGNVQHSSLILERAFHVLYTKGVNVQMISQGASKV--NISFIVNEAEAEGCVQALHKSF 482 (510)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHHHTCCCSEEEECTTCS--EEEEEEEHHHHHHHHHHHHHHH
T ss_pred EEEEEECCCChhHHHHHHHHHHHCCCCEEEEEecCCcc--eEEEEEeHHHHHHHHHHHHHHH
Confidence 444444 799999999999999999999998776653 266677643 23344444443
No 119
>3dhx_A Methionine import ATP-binding protein METN; methionine uptake, regulation, amino-acid transport, ATP-BIN hydrolase, inner membrane, membrane; 2.10A {Escherichia coli} SCOP: d.58.18.13
Probab=35.56 E-value=90 Score=25.26 Aligned_cols=62 Identities=18% Similarity=0.147 Sum_probs=38.8
Q ss_pred EEEEEeC-chhHHHHHHHHHhccCcceeeEEeeecCCC--cEEEEEEeCchhHHHHHHHHHhcCcc
Q 015044 81 ISVFVRD-ESGVVDLIDEVFARRGYNIESLAVSGNKDK--GLFTIVVSGTDRVLQQVIEQLQKLVN 143 (414)
Q Consensus 81 LSVlVeN-~pGVLsRItgLFsRRGyNIeSLtVg~Ted~--~iiTIVV~gde~~veQl~kQL~KLid 143 (414)
|.+.-++ .-.++++++.-|. -.+||-.=.+....+. |.|++.+.|+++.+++.++.|++.--
T Consensus 26 L~f~g~~~~~PiIs~l~~~~~-v~vnIL~g~I~~i~~~~~G~L~v~l~G~~~~~~~ai~~L~~~~v 90 (106)
T 3dhx_A 26 LEFTGQSVDAPLLSETARRFN-VNNNIISAQMDYAGGVKFGIMLTEMHGTQQDTQAAIAWLQEHHV 90 (106)
T ss_dssp EEEEEECTTCCHHHHHHHHSC-CEEEEEEEEEEEETTEEEEEEEEEEESCHHHHHHHHHHHHHTTC
T ss_pred EEEcCCccChhHHHHHHHHHC-CCEEEEEEEeEEECCeeEEEEEEEEeCCHHHHHHHHHHHHHCCC
Confidence 5444433 1236666555442 2356655555544433 45899999999999999999877643
No 120
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=35.00 E-value=55 Score=31.68 Aligned_cols=67 Identities=15% Similarity=0.071 Sum_probs=45.5
Q ss_pred CCCCCeEEecccCc----CCHHHHHHHHHHHHHcCCcee---eEee------cC---chHHHHHHHHhCCCeEEEEEeCC
Q 015044 276 TDPRTDVIIVLQHP----SDYNVMQDAIAILCENDNICC---QVMK------SY---TKKQLITKLSRSGRKVIIATDHG 339 (414)
Q Consensus 276 ~D~~~~V~IimGS~----SD~~v~~~a~~~L~~~gi~~~---~V~S------aH---~p~~~~~~~~~~g~~ViIavA~G 339 (414)
+.+--.|+||+=|. .+-...+.+.+.|+++|..+. .+.. .+ +..++.+.+.+..++.|+++- |
T Consensus 9 L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~r-G 87 (327)
T 4h1h_A 9 LKQGDEIRIIAPSRSIGIMADNQVEIAVNRLTDMGFKVTFGEHVAEMDCMMSSSIRSRVADIHEAFNDSSVKAILTVI-G 87 (327)
T ss_dssp CCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESC-C
T ss_pred CCCCCEEEEEeCCCCcCccCHHHHHHHHHHHHhCCCEEEECcchhhccCcccCCHHHHHHHHHHHhhCCCCCEEEEcC-C
Confidence 44445799996553 356778899999999998765 2211 11 125666667777889999999 5
Q ss_pred CCCC
Q 015044 340 VGAF 343 (414)
Q Consensus 340 ~sa~ 343 (414)
..++
T Consensus 88 G~g~ 91 (327)
T 4h1h_A 88 GFNS 91 (327)
T ss_dssp CSCG
T ss_pred chhH
Confidence 5444
No 121
>1rvv_A Riboflavin synthase; transferase, flavoprotein; HET: INI; 2.40A {Bacillus subtilis} SCOP: c.16.1.1 PDB: 1zis_A* 1vsw_A 1vsx_A 3jv8_A
Probab=34.21 E-value=91 Score=27.69 Aligned_cols=109 Identities=12% Similarity=0.100 Sum_probs=71.8
Q ss_pred CeEEecccCcCCH---HHHHHHHHHHHHcCCcee-----eEeecC-chHHHHHHHHhCCCeEEEEEeCCCCCCCCcCCcc
Q 015044 280 TDVIIVLQHPSDY---NVMQDAIAILCENDNICC-----QVMKSY-TKKQLITKLSRSGRKVIIATDHGVGAFLDKIDLL 350 (414)
Q Consensus 280 ~~V~IimGS~SD~---~v~~~a~~~L~~~gi~~~-----~V~SaH-~p~~~~~~~~~~g~~ViIavA~G~sa~Lp~~gvv 350 (414)
.+++|+.+.-.+. .-.+.|.+.|++.|+..+ +|-++. -|.-..+-++..++|.+||.. -||
T Consensus 13 ~ri~IV~arfn~~I~~~Ll~ga~~~l~~~gv~~~~i~v~~VPGafEiP~aa~~la~~~~yDavIaLG----------~VI 82 (154)
T 1rvv_A 13 LKIGIVVGRFNDFITSKLLSGAEDALLRHGVDTNDIDVAWVPGAFEIPFAAKKMAETKKYDAIITLG----------TVI 82 (154)
T ss_dssp CCEEEEEESTTHHHHHHHHHHHHHHHHHTTCCGGGEEEEEESSGGGHHHHHHHHHHTSCCSEEEEEE----------EEE
T ss_pred CEEEEEEEeCcHHHHHHHHHHHHHHHHHcCCCccceEEEECCcHHHHHHHHHHHHhcCCCCEEEEee----------eee
Confidence 4799999998888 778889999999998743 666676 665444445556789999987 677
Q ss_pred ccCcc---EEEecCcCCCCCCcceeeccCCCCCe----EEEEe-------------cCCcchHHHHHHHHHhcc
Q 015044 351 ASGSP---VIGVPVRASGVTGFPHQFVEMCPKHA----ILLVP-------------VNDAKGAARQAMIICDMV 404 (414)
Q Consensus 351 Ag~T~---VIgVP~~~~~l~G~daLlvqMP~Gvp----VatV~-------------Id~~~nAA~~A~~IL~~~ 404 (414)
=|-|+ .++==++ .|+-- +|+=.|+| |.|+. -|.|..||..|.+++.+.
T Consensus 83 rG~T~Hfd~V~~~vs----~Gl~~--v~l~~~vPV~~GVLT~~~~eQA~~Rag~~~~nkG~eaA~aalem~~l~ 150 (154)
T 1rvv_A 83 RGATTHYDYVCNEAA----KGIAQ--AANTTGVPVIFGIVTTENIEQAIERAGTKAGNKGVDCAVSAIEMANLN 150 (154)
T ss_dssp CCSSSHHHHHHHHHH----HHHHH--HHHHHCSCEEEEEEEESSHHHHHHTEEETTEEHHHHHHHHHHHHHHHH
T ss_pred cCCchHHHHHHHHHH----HHHHH--HHhhhCCCEEEEecCCCCHHHHHHHhcccccchHHHHHHHHHHHHHHH
Confidence 77776 3321111 12111 33333444 44543 245777999999888763
No 122
>2i0f_A 6,7-dimethyl-8-ribityllumazine synthase 1; lumazine synthase RIBH1, transferase; 2.22A {Brucella abortus} PDB: 2f59_A 2o6h_A*
Probab=34.15 E-value=95 Score=27.65 Aligned_cols=109 Identities=17% Similarity=0.133 Sum_probs=71.7
Q ss_pred CeEEecccCcCCH---HHHHHHHHHHHHcCCcee--eEeecC-chHHHHHHHHh-----CCCeEEEEEeCCCCCCCCcCC
Q 015044 280 TDVIIVLQHPSDY---NVMQDAIAILCENDNICC--QVMKSY-TKKQLITKLSR-----SGRKVIIATDHGVGAFLDKID 348 (414)
Q Consensus 280 ~~V~IimGS~SD~---~v~~~a~~~L~~~gi~~~--~V~SaH-~p~~~~~~~~~-----~g~~ViIavA~G~sa~Lp~~g 348 (414)
.+++||.+.-.+. .-.+.|.+.|++.|..++ .|-++. -|.-..+-++. ..+|.+||.. -
T Consensus 13 ~ri~IV~arfn~~I~~~Ll~gA~~~l~~~G~~i~v~~VPGafEiP~aa~~la~~~~~~~~~yDavIaLG----------~ 82 (157)
T 2i0f_A 13 PHLLIVEARFYDDLADALLDGAKAALDEAGATYDVVTVPGALEIPATISFALDGADNGGTEYDGFVALG----------T 82 (157)
T ss_dssp CEEEEEEECSSHHHHHHHHHHHHHHHHHTTCEEEEEEESSGGGHHHHHHHHHHHHHTTCCCCSEEEEEE----------E
T ss_pred cEEEEEEEeCcHHHHHHHHHHHHHHHHHcCCCeEEEECCcHHHHHHHHHHHHhhccccCCCCCEEEEee----------e
Confidence 5899999998887 778889999999996666 777777 66444444444 5689999977 6
Q ss_pred ccccCcc---EEEecCcCCCCCCcceeeccCCCCCe----EEEEe-------------cCCcchHHHHHHHHHhcc
Q 015044 349 LLASGSP---VIGVPVRASGVTGFPHQFVEMCPKHA----ILLVP-------------VNDAKGAARQAMIICDMV 404 (414)
Q Consensus 349 vvAg~T~---VIgVP~~~~~l~G~daLlvqMP~Gvp----VatV~-------------Id~~~nAA~~A~~IL~~~ 404 (414)
||=|-|+ .|+==++ .|+-- +++=.|+| |.|+. -|.|..||..|.+++.+.
T Consensus 83 VIrG~T~Hfd~Va~~v~----~gl~~--vsl~~~vPV~~GVLT~~~~eQA~~Rag~~~~nkG~eaA~aAlem~~l~ 152 (157)
T 2i0f_A 83 VIRGETYHFDIVSNESC----RALTD--LSVEESIAIGNGILTVENEEQAWVHARREDKDKGGFAARAALTMIGLR 152 (157)
T ss_dssp EECCSSSTTHHHHHHHH----HHHHH--HHHHTTCCEEEEEEEESSHHHHHHHHCTTTTCHHHHHHHHHHHHHHHH
T ss_pred eecCCchHHHHHHHHHH----HHHHH--HHhhcCCCEEEEEeCCCCHHHHHHHhCccccccHHHHHHHHHHHHHHH
Confidence 7777776 3321111 12111 33334444 45542 134788889998888764
No 123
>1di0_A Lumazine synthase; transferase; 2.70A {Brucella abortus} SCOP: c.16.1.1 PDB: 1t13_A* 1xn1_A
Probab=33.11 E-value=71 Score=28.46 Aligned_cols=66 Identities=11% Similarity=0.045 Sum_probs=50.1
Q ss_pred CeEEecccCcCCH---HHHHHHHHHHHHcCCcee-----eEeecC-chHHHHHHHHhCCCeEEEEEeCCCCCCCCcCCcc
Q 015044 280 TDVIIVLQHPSDY---NVMQDAIAILCENDNICC-----QVMKSY-TKKQLITKLSRSGRKVIIATDHGVGAFLDKIDLL 350 (414)
Q Consensus 280 ~~V~IimGS~SD~---~v~~~a~~~L~~~gi~~~-----~V~SaH-~p~~~~~~~~~~g~~ViIavA~G~sa~Lp~~gvv 350 (414)
.+++|+.+.-.+. .-.+.|.+.|++.|+..+ +|-++. -|.-..+-++..++|.+||.. -||
T Consensus 11 ~ri~IV~arfn~~I~~~Ll~gA~~~l~~~gv~~~~i~v~~VPGafEiP~aa~~la~~~~yDavIaLG----------~VI 80 (158)
T 1di0_A 11 FKIAFIQARWHADIVDEARKSFVAELAAKTGGSVEVEIFDVPGAYEIPLHAKTLARTGRYAAIVGAA----------FVI 80 (158)
T ss_dssp EEEEEEEECTTHHHHHHHHHHHHHHHHHHHTTSEEEEEEEESSGGGHHHHHHHHHHTSCCSEEEEEE----------ECC
T ss_pred CEEEEEEEeCcHHHHHHHHHHHHHHHHHcCCCccceEEEECCcHHHHHHHHHHHHhcCCCCEEEEee----------ccc
Confidence 4799999998888 778889999999998753 666666 565444445556789999977 667
Q ss_pred ccCcc
Q 015044 351 ASGSP 355 (414)
Q Consensus 351 Ag~T~ 355 (414)
=|-|+
T Consensus 81 rG~T~ 85 (158)
T 1di0_A 81 DGGIY 85 (158)
T ss_dssp CCSSB
T ss_pred cCCCc
Confidence 67776
No 124
>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4
Probab=32.74 E-value=1.1e+02 Score=25.55 Aligned_cols=49 Identities=8% Similarity=0.148 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHcCCc-ee-eEeecCch-HHHHHHHHhCCCeEEEEEeCCCCC
Q 015044 293 NVMQDAIAILCENDNI-CC-QVMKSYTK-KQLITKLSRSGRKVIIATDHGVGA 342 (414)
Q Consensus 293 ~v~~~a~~~L~~~gi~-~~-~V~SaH~p-~~~~~~~~~~g~~ViIavA~G~sa 342 (414)
...+++.+.+++.|++ ++ .+. ...| ..+++.+++.+++.||.+++|++.
T Consensus 81 ~~l~~~~~~~~~~gv~~v~~~v~-~G~~~~~I~~~a~~~~~DLIV~G~~g~~~ 132 (163)
T 1tq8_A 81 EILHDAKERAHNAGAKNVEERPI-VGAPVDALVNLADEEKADLLVVGNVGLST 132 (163)
T ss_dssp HHHHHHHHHHHTTTCCEEEEEEE-CSSHHHHHHHHHHHTTCSEEEEECCCCCS
T ss_pred HHHHHHHHHHHHcCCCeEEEEEe-cCCHHHHHHHHHHhcCCCEEEECCCCCCc
Confidence 4566777778888998 77 443 2356 667777777889999999877765
No 125
>2b99_A Riboflavin synthase; lumazine riboflavin, transferase; HET: RDL; 2.22A {Methanocaldococcus jannaschii} PDB: 2b98_A*
Probab=32.04 E-value=48 Score=29.68 Aligned_cols=104 Identities=17% Similarity=0.070 Sum_probs=66.0
Q ss_pred eEEecccCcCCHHHHHHHHHHHHHcCCcee----eEeecC-chHHHHHHHHhCCCeEEEEEeCCCCCCCCcCCccccCcc
Q 015044 281 DVIIVLQHPSDYNVMQDAIAILCENDNICC----QVMKSY-TKKQLITKLSRSGRKVIIATDHGVGAFLDKIDLLASGSP 355 (414)
Q Consensus 281 ~V~IimGS~SD~~v~~~a~~~L~~~gi~~~----~V~SaH-~p~~~~~~~~~~g~~ViIavA~G~sa~Lp~~gvvAg~T~ 355 (414)
+++||.+.-.+-.-.+.|.+.|++.|+..+ +|-++. -|.-..+-++..++|.+||.. +| |-|+
T Consensus 4 ri~IV~arfn~~~Ll~gA~~~L~~~G~~~~i~~~~VPGafEiP~aak~la~~~~yDavIaLG-----------~V-G~T~ 71 (156)
T 2b99_A 4 KVGIVDTTFARVDMASIAIKKLKELSPNIKIIRKTVPGIKDLPVACKKLLEEEGCDIVMALG-----------MP-GKAE 71 (156)
T ss_dssp EEEEEEESSCSSCCHHHHHHHHHHHCTTCEEEEEEESSGGGHHHHHHHHHHHSCCSEEEEEE-----------CC-CSSH
T ss_pred EEEEEEEecchHHHHHHHHHHHHHcCCCCeEEEEECCcHHHHHHHHHHHHhcCCCCEEEEec-----------cc-CCcc
Confidence 578888776665566889999999998766 455555 554444445556799999976 33 6666
Q ss_pred ---EEEecCcCCCCCCcceee-ccCCCCCeEEEEecC----------------CcchHHHHHHHHHhc
Q 015044 356 ---VIGVPVRASGVTGFPHQF-VEMCPKHAILLVPVN----------------DAKGAARQAMIICDM 403 (414)
Q Consensus 356 ---VIgVP~~~~~l~G~daLl-vqMP~GvpVatV~Id----------------~~~nAA~~A~~IL~~ 403 (414)
.|.==++. | |. +|+=.|+||.-...+ .|..||..|.+++.+
T Consensus 72 Hfd~Va~~vs~----G---l~~v~L~~~vPV~~gt~~~~eqa~~r~~g~k~~nKG~EaA~aaiem~~l 132 (156)
T 2b99_A 72 KDKVCAHEASL----G---LMLAQLMTNKHIIEVFVHEDEAKDDKELDWLAKRRAEEHAENVYYLLFK 132 (156)
T ss_dssp HHHHHHHHHHH----H---HHHHHHHHTCCEEEEECCGGGSSSHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred hhHHHHHHHHH----H---HHHHHhhhCCCEEEEeCCCHHHHHHHhhcchhhhhHHHHHHHHHHHHHH
Confidence 33211111 2 22 555566676544333 456678888888875
No 126
>1hqk_A 6,7-dimethyl-8-ribityllumazine synthase; analysi stability, vitamin biosynthesis, transferase; 1.60A {Aquifex aeolicus} SCOP: c.16.1.1 PDB: 1nqu_A* 1nqv_A* 1nqw_A* 1nqx_A*
Probab=31.82 E-value=88 Score=27.74 Aligned_cols=108 Identities=16% Similarity=0.148 Sum_probs=71.5
Q ss_pred CeEEecccCcCCH---HHHHHHHHHHHHcCCcee-----eEeecC-chHHHHHHHHhCCCeEEEEEeCCCCCCCCcCCcc
Q 015044 280 TDVIIVLQHPSDY---NVMQDAIAILCENDNICC-----QVMKSY-TKKQLITKLSRSGRKVIIATDHGVGAFLDKIDLL 350 (414)
Q Consensus 280 ~~V~IimGS~SD~---~v~~~a~~~L~~~gi~~~-----~V~SaH-~p~~~~~~~~~~g~~ViIavA~G~sa~Lp~~gvv 350 (414)
.+++|+.+.-.+. .-.+.|.+.|++.|+..+ +|-++. -|.-..+-++..++|.+||.. -||
T Consensus 13 ~ri~IV~arfn~~I~~~Ll~ga~~~l~~~gv~~~~i~v~~VPGafEiP~aa~~la~~~~yDavIalG----------~VI 82 (154)
T 1hqk_A 13 LRFGIVASRFNHALVDRLVEGAIDCIVRHGGREEDITLVRVPGSWEIPVAAGELARKEDIDAVIAIG----------VLI 82 (154)
T ss_dssp CCEEEEEECTTHHHHHHHHHHHHHHHHHTTCCGGGEEEEEESSGGGHHHHHHHHHTCTTCCEEEEEE----------EEE
T ss_pred CEEEEEEeeCcHHHHHHHHHHHHHHHHHcCCCccceEEEECCcHHHHHHHHHHHHhcCCCCEEEEee----------eee
Confidence 4799999998888 778889999999998643 566666 555444444555689999987 677
Q ss_pred ccCcc---EEEecCcCCCCCCcceee-ccCCCCCe----EEEEe-------------cCCcchHHHHHHHHHhcc
Q 015044 351 ASGSP---VIGVPVRASGVTGFPHQF-VEMCPKHA----ILLVP-------------VNDAKGAARQAMIICDMV 404 (414)
Q Consensus 351 Ag~T~---VIgVP~~~~~l~G~daLl-vqMP~Gvp----VatV~-------------Id~~~nAA~~A~~IL~~~ 404 (414)
=|-|+ .++==++ .| |. +|+=.|+| |.|+. -|.|..||..|.+++.+.
T Consensus 83 rG~T~Hfd~Va~~vs----~g---l~~v~l~~~vPV~~GVLT~~~~eQA~~Rag~~~~nkG~eaA~aalem~~l~ 150 (154)
T 1hqk_A 83 RGATPHFDYIASEVS----KG---LANLSLELRKPITFGVITADTLEQAIERAGTKHGNKGWEAALSAIEMANLF 150 (154)
T ss_dssp CCSSTHHHHHHHHHH----HH---HHHHHHHHTSCEEEEEEEESSHHHHHHHEEETTEEHHHHHHHHHHHHHHHH
T ss_pred cCCchHHHHHHHHHH----HH---HHHHHhhcCCCEEEEEeCCCCHHHHHHHhcccccchHHHHHHHHHHHHHHH
Confidence 77776 3321111 12 22 34334444 44553 245777999998888763
No 127
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=31.28 E-value=18 Score=32.60 Aligned_cols=110 Identities=12% Similarity=0.174 Sum_probs=64.2
Q ss_pred eEEecccCcCCHHHHHHHHHHHHHcCCcee-eEeecCchHHHHHHHHhCCCeEEEEEeCCCCCCCCcCCccccCccEEEe
Q 015044 281 DVIIVLQHPSDYNVMQDAIAILCENDNICC-QVMKSYTKKQLITKLSRSGRKVIIATDHGVGAFLDKIDLLASGSPVIGV 359 (414)
Q Consensus 281 ~V~IimGS~SD~~v~~~a~~~L~~~gi~~~-~V~SaH~p~~~~~~~~~~g~~ViIavA~G~sa~Lp~~gvvAg~T~VIgV 359 (414)
+++++.....=...++ +++.+++...+ .+.+.-...+..+.+ ..|++|||+-- |.+..|- .-+ ..+||-+
T Consensus 6 ~I~~iapy~~l~~~~~---~i~~e~~~~i~i~~~~l~~~v~~a~~~-~~~~dVIISRG-gta~~lr--~~~--~iPVV~I 76 (196)
T 2q5c_A 6 KIALISQNENLLNLFP---KLALEKNFIPITKTASLTRASKIAFGL-QDEVDAIISRG-ATSDYIK--KSV--SIPSISI 76 (196)
T ss_dssp EEEEEESCHHHHHHHH---HHHHHHTCEEEEEECCHHHHHHHHHHH-TTTCSEEEEEH-HHHHHHH--TTC--SSCEEEE
T ss_pred cEEEEEccHHHHHHHH---HHHhhhCCceEEEECCHHHHHHHHHHh-cCCCeEEEECC-hHHHHHH--HhC--CCCEEEE
Confidence 5666665544444444 45556666433 222222345666667 68899999865 6555555 221 1338888
Q ss_pred cCcCCCCCCcceee-ccCCCCC--eEEEEecCCcchHHHHHHHHHhcc
Q 015044 360 PVRASGVTGFPHQF-VEMCPKH--AILLVPVNDAKGAARQAMIICDMV 404 (414)
Q Consensus 360 P~~~~~l~G~daLl-vqMP~Gv--pVatV~Id~~~nAA~~A~~IL~~~ 404 (414)
|++. .|.|- ++.+... .+|+|+-.+....+-.-..+|++.
T Consensus 77 ~~s~-----~Dil~al~~a~~~~~kIavvg~~~~~~~~~~~~~ll~~~ 119 (196)
T 2q5c_A 77 KVTR-----FDTMRAVYNAKRFGNELALIAYKHSIVDKHEIEAMLGVK 119 (196)
T ss_dssp CCCH-----HHHHHHHHHHGGGCSEEEEEEESSCSSCHHHHHHHHTCE
T ss_pred cCCH-----hHHHHHHHHHHhhCCcEEEEeCcchhhHHHHHHHHhCCc
Confidence 8764 56554 3322221 599998888777766666777653
No 128
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A
Probab=30.33 E-value=1.5e+02 Score=23.26 Aligned_cols=37 Identities=11% Similarity=0.155 Sum_probs=27.0
Q ss_pred cCC-cee-eEeecCch-HHHHHHHHhCCCeEEEEEeCCCCC
Q 015044 305 NDN-ICC-QVMKSYTK-KQLITKLSRSGRKVIIATDHGVGA 342 (414)
Q Consensus 305 ~gi-~~~-~V~SaH~p-~~~~~~~~~~g~~ViIavA~G~sa 342 (414)
.|+ +++ .+. ...+ ..+++..++.+++.||.+++|++.
T Consensus 73 ~g~~~~~~~~~-~g~~~~~I~~~a~~~~~dliV~G~~~~~~ 112 (137)
T 2z08_A 73 TGVPKEDALLL-EGVPAEAILQAARAEKADLIVMGTRGLGA 112 (137)
T ss_dssp HCCCGGGEEEE-ESSHHHHHHHHHHHTTCSEEEEESSCTTC
T ss_pred cCCCccEEEEE-ecCHHHHHHHHHHHcCCCEEEECCCCCch
Confidence 788 777 543 2355 667777777889999999977664
No 129
>2zbc_A 83AA long hypothetical transcriptional regulator; SARD; 1.90A {Sulfolobus tokodaii}
Probab=29.38 E-value=1.7e+02 Score=21.47 Aligned_cols=65 Identities=18% Similarity=0.159 Sum_probs=46.2
Q ss_pred EEEEEeCchhHHHHHHHHHhcCccEEEEEecCCchhhheeeeEEEEecCccccccccCCHHHHHHHHH-hhccCCcEEEe
Q 015044 120 FTIVVSGTDRVLQQVIEQLQKLVNVLKVEDFSNEPVIERELMLIKVNADPKFCAEVSGDPGKVAAVQR-NSSTVGILEIA 198 (414)
Q Consensus 120 iTIVV~gde~~veQl~kQL~KLidVikV~dlt~~~~V~REL~LiKV~~~~~~r~EvTG~~~KIdafi~-~L~~fGIlEia 198 (414)
+.|.+.. ...+++.++|.++-+|..+...+.+.. .++||.+. +.+.++.|+. .|....=+.-+
T Consensus 6 v~v~~~~--~~~~~~~~~l~~~peV~~~~~vtG~~d-----~l~~v~~~---------d~~~l~~~~~~~l~~~~gV~~~ 69 (83)
T 2zbc_A 6 VLINTDA--GGEDEVFERLKSMSEVTEVHVVYGVYD-----IVVKVEAD---------SMDKLKDFVTNTIRKLPKVRST 69 (83)
T ss_dssp EEEEEST--TCHHHHHHHHTTCTTEEEEEECSSSCS-----EEEEEECS---------SHHHHHHHHHHTGGGSTTEEEE
T ss_pred EEEEEcC--CCHHHHHHHHhCCCCeEEEEEEeccCC-----EEEEEEEC---------CHHHHHHHHHHHhcCCCCEeEE
Confidence 3444443 346899999999999999999997643 46677654 6778899995 88876434444
Q ss_pred cc
Q 015044 199 RT 200 (414)
Q Consensus 199 RT 200 (414)
+|
T Consensus 70 ~t 71 (83)
T 2zbc_A 70 LT 71 (83)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 130
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=28.61 E-value=79 Score=30.80 Aligned_cols=67 Identities=12% Similarity=-0.026 Sum_probs=45.3
Q ss_pred CCCCCeEEecccCcC----CHHHHHHHHHHHHHcCCcee---eEe------ecC---chHHHHHHHHhCCCeEEEEEeCC
Q 015044 276 TDPRTDVIIVLQHPS----DYNVMQDAIAILCENDNICC---QVM------KSY---TKKQLITKLSRSGRKVIIATDHG 339 (414)
Q Consensus 276 ~D~~~~V~IimGS~S----D~~v~~~a~~~L~~~gi~~~---~V~------SaH---~p~~~~~~~~~~g~~ViIavA~G 339 (414)
+.+.-.|+||+=|.. |....+.+.+.|+++|..+. .+. +.+ +..++.+.+.+..+++|+++- |
T Consensus 10 L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~r-G 88 (336)
T 3sr3_A 10 LKYGDTIGIYSPSSPVTYTSPKRFERAKSYLLQKGFHILEGSLTGRYDYYRSGSIQERAKELNALIRNPNVSCIMSTI-G 88 (336)
T ss_dssp CCTTCEEEEECSSSCHHHHCHHHHHHHHHHHHHTTCEEEECTTTTCCBTTBSSCHHHHHHHHHHHHHCTTEEEEEESC-C
T ss_pred CCCCCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEEcccccccccccCCCHHHHHHHHHHHhhCCCCCEEEEcc-c
Confidence 344447999976653 55778999999999999765 121 111 225666667777889999999 5
Q ss_pred CCCC
Q 015044 340 VGAF 343 (414)
Q Consensus 340 ~sa~ 343 (414)
..++
T Consensus 89 G~g~ 92 (336)
T 3sr3_A 89 GMNS 92 (336)
T ss_dssp CSCG
T ss_pred cccH
Confidence 4443
No 131
>3iv7_A Alcohol dehydrogenase IV; NP_602249.1, iron-containing alcohol dehydrogenase, structur genomics, joint center for structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=28.10 E-value=10 Score=37.44 Aligned_cols=76 Identities=8% Similarity=0.142 Sum_probs=46.1
Q ss_pred eEEecccCcCCHHHHHHHHHHHHHcCCceeeEee--cC-ch---HHHHHHHHhCCCeEEEEEeCCCCCCCCcCCccccCc
Q 015044 281 DVIIVLQHPSDYNVMQDAIAILCENDNICCQVMK--SY-TK---KQLITKLSRSGRKVIIATDHGVGAFLDKIDLLASGS 354 (414)
Q Consensus 281 ~V~IimGS~SD~~v~~~a~~~L~~~gi~~~~V~S--aH-~p---~~~~~~~~~~g~~ViIavA~G~sa~Lp~~gvvAg~T 354 (414)
+|.||++... ....++. .+.|+ .+..+.. .| +. .+..+.+++.++++|||+=||..--+. ..+|...
T Consensus 39 rvliVtd~~~-~~~~~~v---~~~L~-~~~~f~~v~~~p~~~~v~~~~~~~~~~~~D~IIavGGGs~iD~a--K~iA~~~ 111 (364)
T 3iv7_A 39 KVMVIAGERE-MSIAHKV---ASEIE-VAIWHDEVVMHVPIEVAERARAVATDNEIDLLVCVGGGSTIGLA--KAIAMTT 111 (364)
T ss_dssp SEEEECCGGG-HHHHHHH---TTTSC-CSEEECCCCTTCBHHHHHHHHHHHHHTTCCEEEEEESHHHHHHH--HHHHHHH
T ss_pred EEEEEECCCH-HHHHHHH---HHHcC-CCEEEcceecCCCHHHHHHHHHHHHhcCCCEEEEeCCcHHHHHH--HHHHhcc
Confidence 6889988764 3444433 33444 2222211 33 22 555566777899999999855555556 5565543
Q ss_pred c--EEEecCcC
Q 015044 355 P--VIGVPVRA 363 (414)
Q Consensus 355 ~--VIgVP~~~ 363 (414)
. +|.||+..
T Consensus 112 ~~P~i~IPTTa 122 (364)
T 3iv7_A 112 ALPIVAIPTTY 122 (364)
T ss_dssp CCCEEEEECSS
T ss_pred CCCEEEEcCCc
Confidence 3 99999865
No 132
>1c2y_A Protein (lumazine synthase); riboflavin biosynthesis, transferase; HET: LMZ; 3.30A {Spinacia oleracea} SCOP: c.16.1.1
Probab=27.75 E-value=1.2e+02 Score=26.94 Aligned_cols=66 Identities=11% Similarity=0.087 Sum_probs=48.9
Q ss_pred CeEEecccCcCCH---HHHHHHHHHHHHcCCc--ee--eEeecC-chHHHHHHHHhCCCeEEEEEeCCCCCCCCcCCccc
Q 015044 280 TDVIIVLQHPSDY---NVMQDAIAILCENDNI--CC--QVMKSY-TKKQLITKLSRSGRKVIIATDHGVGAFLDKIDLLA 351 (414)
Q Consensus 280 ~~V~IimGS~SD~---~v~~~a~~~L~~~gi~--~~--~V~SaH-~p~~~~~~~~~~g~~ViIavA~G~sa~Lp~~gvvA 351 (414)
.+++|+.+.-.+. .-.+.|.+.|++.|+. .+ +|-++. -|.-..+-++..++|.+||.. -||=
T Consensus 14 ~ri~IV~arfn~~I~~~Ll~ga~~~l~~~Gv~~~i~v~~VPGafEiP~aa~~la~~~~yDavIaLG----------~VIr 83 (156)
T 1c2y_A 14 FRFAIVVARFNEFVTRRLMEGALDTFKKYSVNEDIDVVWVPGAYELGVTAQALGKSGKYHAIVCLG----------AVVK 83 (156)
T ss_dssp CCEEEEEESTTHHHHHHHHHHHHHHHHHTTCCSCCEEEEESSHHHHHHHHHHHHHTTCCSEEEEEE----------ECCC
T ss_pred CEEEEEEEeCcHHHHHHHHHHHHHHHHHcCCCCceEEEECCcHHHHHHHHHHHHhcCCCCEEEEec----------cccc
Confidence 4799999998887 7778899999999986 22 566666 554444334555689999987 6777
Q ss_pred cCcc
Q 015044 352 SGSP 355 (414)
Q Consensus 352 g~T~ 355 (414)
|-|+
T Consensus 84 G~T~ 87 (156)
T 1c2y_A 84 GDTS 87 (156)
T ss_dssp CSST
T ss_pred CCch
Confidence 7776
No 133
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=27.60 E-value=1.4e+02 Score=25.83 Aligned_cols=65 Identities=18% Similarity=0.123 Sum_probs=39.8
Q ss_pred CCeEEecccCcC------------CHHHHHHHHHHHHHcCCceeeEeecC-chHHHHHHH---H-hCCCeEEEEEeCCCC
Q 015044 279 RTDVIIVLQHPS------------DYNVMQDAIAILCENDNICCQVMKSY-TKKQLITKL---S-RSGRKVIIATDHGVG 341 (414)
Q Consensus 279 ~~~V~IimGS~S------------D~~v~~~a~~~L~~~gi~~~~V~SaH-~p~~~~~~~---~-~~g~~ViIavA~G~s 341 (414)
..+|+||+-|++ |-. ..-..+.|+++|+++....-.- .+.++.+.+ . ..++|++|..- |.+
T Consensus 15 ~~~v~iitvsd~~~~~~~~~g~i~D~n-g~~L~~~L~~~G~~v~~~~iV~Dd~~~i~~al~~~~a~~~~DlVittG-G~g 92 (178)
T 3iwt_A 15 SLNFYVITISTSRYEKLLKKEPIVDES-GDIIKQLLIENGHKIIGYSLVPDDKIKILKAFTDALSIDEVDVIISTG-GTG 92 (178)
T ss_dssp CCEEEEEEECHHHHHHHHTTCCCCCHH-HHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHTCTTCCEEEEES-CCS
T ss_pred CCEEEEEEEcCCCccccccCCCCCcch-HHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhcCCCCEEEecC-Ccc
Confidence 358999987753 322 1235678999999877333233 444433333 2 24578998877 777
Q ss_pred CCCC
Q 015044 342 AFLD 345 (414)
Q Consensus 342 a~Lp 345 (414)
-.--
T Consensus 93 ~~~~ 96 (178)
T 3iwt_A 93 YSPT 96 (178)
T ss_dssp SSTT
T ss_pred cCCC
Confidence 6544
No 134
>3lft_A Uncharacterized protein; ABC, ATPase, cassette, L-Trp, PSI, MCSG, structural genomics center for structural genomics; HET: MSE TRP; 1.35A {Streptococcus pneumoniae}
Probab=26.97 E-value=55 Score=29.57 Aligned_cols=115 Identities=9% Similarity=0.014 Sum_probs=0.0
Q ss_pred CCCeEEecccCcCC--HHHHHHHHHHHHHcCCcee--eEeecCchHHHHHHHHhCCCeEEEEEeCCCCCCCCcCCccccC
Q 015044 278 PRTDVIIVLQHPSD--YNVMQDAIAILCENDNICC--QVMKSYTKKQLITKLSRSGRKVIIATDHGVGAFLDKIDLLASG 353 (414)
Q Consensus 278 ~~~~V~IimGS~SD--~~v~~~a~~~L~~~gi~~~--~V~SaH~p~~~~~~~~~~g~~ViIavA~G~sa~Lp~~gvvAg~ 353 (414)
+|.+|++|.|.... ..-.+...+.|+++|+++. .+.+.....+.++++.. +.++|++.. ..+|-.
T Consensus 132 g~~~I~~i~~~~~~~~~~r~~g~~~al~~~gi~~~~~~~~~~~~~~~~~~~l~~-~~dai~~~~----------D~~a~g 200 (295)
T 3lft_A 132 NVKTIGALYSSSEDNSKTQVEEFKAYAEKAGLTVETFAVPSTNEIASTVTVMTS-KVDAIWVPI----------DNTIAS 200 (295)
T ss_dssp TCCEEEEEEETTCHHHHHHHHHHHHHHHHTTCEEEEEEESSGGGHHHHHHHHTT-TCSEEEECS----------CHHHHH
T ss_pred CCcEEEEEeCCCCcchHHHHHHHHHHHHHcCCEEEEEecCCHHHHHHHHHHHHh-cCCEEEECC----------chhHHH
Q ss_pred cc----EEEecCcCCCCCCcceeeccCCCCCeEEEEecC---CcchHHHHHHHHHhccCCC
Q 015044 354 SP----VIGVPVRASGVTGFPHQFVEMCPKHAILLVPVN---DAKGAARQAMIICDMVHPG 407 (414)
Q Consensus 354 T~----VIgVP~~~~~l~G~daLlvqMP~GvpVatV~Id---~~~nAA~~A~~IL~~~~~~ 407 (414)
.. -.|+|-.. ..-|+|-..+.-| +++||..+ =|+-||.++.++|.-..+.
T Consensus 201 ~~~~l~~~~~~~~i-~vig~d~~~~~~~---~Lttv~~~~~~~G~~Aa~~l~~~l~g~~~~ 257 (295)
T 3lft_A 201 GFPTVVSSNQSSKK-PIYPSATAMVEVG---GLASVVIDQHDLGVATGKMIVQVLKGAKPA 257 (295)
T ss_dssp THHHHHHHTTTTCC-CEEESSHHHHTTT---CCEEEECCHHHHHHHHHHHHHHHHTTCCGG
T ss_pred HHHHHHHHHHHcCC-CEEeCCHHHHhcC---cEEEEecCHHHHHHHHHHHHHHHHCcCCcc
No 135
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=26.78 E-value=93 Score=30.29 Aligned_cols=66 Identities=15% Similarity=0.048 Sum_probs=45.1
Q ss_pred CCCCCeEEecccCcC----CHHHHHHHHHHHHHcCCcee---eEee------cC---chHHHHHHHHhCCCeEEEEEeCC
Q 015044 276 TDPRTDVIIVLQHPS----DYNVMQDAIAILCENDNICC---QVMK------SY---TKKQLITKLSRSGRKVIIATDHG 339 (414)
Q Consensus 276 ~D~~~~V~IimGS~S----D~~v~~~a~~~L~~~gi~~~---~V~S------aH---~p~~~~~~~~~~g~~ViIavA~G 339 (414)
+.+.-.|+||+=|.. |....+.+.+.|+++|..+. .+.. .+ +..++.+.+.+..+++|+++- |
T Consensus 9 L~~GD~I~ivaPS~~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~r-G 87 (331)
T 4e5s_A 9 LKKGDEIRVISPSCSLSIVSTENRRLAVKRLTELGFHVTFSTHAEEIDRFASSSISSRVQDLHEAFRDPNVKAILTTL-G 87 (331)
T ss_dssp CCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESC-C
T ss_pred CCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEcc-c
Confidence 344447888865543 57889999999999999866 2211 11 225666667777889999999 5
Q ss_pred CCC
Q 015044 340 VGA 342 (414)
Q Consensus 340 ~sa 342 (414)
..+
T Consensus 88 G~g 90 (331)
T 4e5s_A 88 GYN 90 (331)
T ss_dssp CSC
T ss_pred ccc
Confidence 444
No 136
>3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A*
Probab=25.61 E-value=1.6e+02 Score=23.06 Aligned_cols=45 Identities=7% Similarity=-0.031 Sum_probs=28.3
Q ss_pred HHHHHHHHHHcCCcee--eEeecC-ch-HHHHHHHHhCCCeEEEEEeCC
Q 015044 295 MQDAIAILCENDNICC--QVMKSY-TK-KQLITKLSRSGRKVIIATDHG 339 (414)
Q Consensus 295 ~~~a~~~L~~~gi~~~--~V~SaH-~p-~~~~~~~~~~g~~ViIavA~G 339 (414)
.++..+.++++|++.. ...-.+ .+ ..+++..++.+++.||.+++|
T Consensus 68 ~~~l~~~~~~~~~~~~~v~~~~~~g~~~~~I~~~a~~~~~dliV~G~~~ 116 (143)
T 3fdx_A 68 ETQLKEIAKKFSIPEDRMHFHVAEGSPKDKILALAKSLPADLVIIASHR 116 (143)
T ss_dssp HHHHHHHHTTSCCCGGGEEEEEEESCHHHHHHHHHHHTTCSEEEEESSC
T ss_pred HHHHHHHHHHcCCCCCceEEEEEecChHHHHHHHHHHhCCCEEEEeCCC
Confidence 3344555667777643 211223 55 667777777789999999964
No 137
>2djw_A Probable transcriptional regulator, ASNC family; structural genomics, thermus thermophilus HB8, NPPSFA; 2.40A {Thermus thermophilus}
Probab=25.48 E-value=1.4e+02 Score=22.82 Aligned_cols=65 Identities=17% Similarity=0.118 Sum_probs=44.9
Q ss_pred EEEEEeCchhHHHHHHHHHhcCccEEEEEecCCchhhheeeeEEEEecCccccccccCCHHHHHHHH-HhhccCCcEEEe
Q 015044 120 FTIVVSGTDRVLQQVIEQLQKLVNVLKVEDFSNEPVIERELMLIKVNADPKFCAEVSGDPGKVAAVQ-RNSSTVGILEIA 198 (414)
Q Consensus 120 iTIVV~gde~~veQl~kQL~KLidVikV~dlt~~~~V~REL~LiKV~~~~~~r~EvTG~~~KIdafi-~~L~~fGIlEia 198 (414)
+.|.+. ....+++.++|.++-+|..+...+.+.. .++||.+. +.+.++.|+ +.|....=+.-+
T Consensus 6 v~v~~~--~~~~~~~~~~l~~~peV~~~~~vtG~~D-----~ll~v~~~---------d~~~l~~~l~~~l~~~~gV~~~ 69 (92)
T 2djw_A 6 VLIRPR--GNRVQALGEAIAELPQVAEVYSVTGPYD-----LVALVRLK---------DVEELDDVVTQGILSLEGVERT 69 (92)
T ss_dssp EEEEEC--GGGHHHHHHHHTTSTTEEEEEEESSSSS-----EEEEEEES---------SGGGHHHHCCCCCTTSTTEEEE
T ss_pred EEEEEc--CCCHHHHHHHHhcCCCeEEEEEeecCCC-----EEEEEEEC---------CHHHHHHHHHHhcccCCCEeEE
Confidence 334444 3458999999999999999999998644 36777664 456678887 567766333334
Q ss_pred cc
Q 015044 199 RT 200 (414)
Q Consensus 199 RT 200 (414)
+|
T Consensus 70 ~T 71 (92)
T 2djw_A 70 ET 71 (92)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 138
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus}
Probab=25.41 E-value=2.6e+02 Score=25.09 Aligned_cols=51 Identities=12% Similarity=0.129 Sum_probs=37.3
Q ss_pred CHHHHHHHHHHHHHcCCcee-eEeecCch-HHHHHHHHhCCCeEEEEEeCCCCC
Q 015044 291 DYNVMQDAIAILCENDNICC-QVMKSYTK-KQLITKLSRSGRKVIIATDHGVGA 342 (414)
Q Consensus 291 D~~v~~~a~~~L~~~gi~~~-~V~SaH~p-~~~~~~~~~~g~~ViIavA~G~sa 342 (414)
.....+++.+.|++.|++++ .+.. ..+ ..+++.+++.+++.+|.+++|.+.
T Consensus 212 ~~~~l~~~~~~l~~~~~~~~~~~~~-g~~~~~I~~~a~~~~~dLlV~G~~~~~~ 264 (294)
T 3loq_A 212 KTADLRVMEEVIGAEGIEVHVHIES-GTPHKAILAKREEINATTIFMGSRGAGS 264 (294)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEEEC-SCHHHHHHHHHHHTTCSEEEEECCCCSC
T ss_pred HHHHHHHHHHHHHHcCCcEEEEEec-CCHHHHHHHHHHhcCcCEEEEeCCCCCC
Confidence 56778888889999999877 4432 255 566666777788999998866554
No 139
>1x60_A Sporulation-specific N-acetylmuramoyl-L-alanine amidase; CWLC, CWLCR, peptidoglycan, cell WALL lytic amidase, tandem repeats, hydrolase; NMR {Bacillus subtilis}
Probab=24.48 E-value=2e+02 Score=21.32 Aligned_cols=57 Identities=9% Similarity=0.023 Sum_probs=40.7
Q ss_pred CCeEEecccCcCCHHHHHHHHHHHHHcCCcee--------eE-eecC-ch---HHHHHHHHhCCCeEEEE
Q 015044 279 RTDVIIVLQHPSDYNVMQDAIAILCENDNICC--------QV-MKSY-TK---KQLITKLSRSGRKVIIA 335 (414)
Q Consensus 279 ~~~V~IimGS~SD~~v~~~a~~~L~~~gi~~~--------~V-~SaH-~p---~~~~~~~~~~g~~ViIa 335 (414)
.....|-.|+-+|..-++....-|...|.+.. +| ++.. +. .+..++++..|++.+|.
T Consensus 7 ~~~~~vQvGaf~~~~~A~~~~~~L~~~g~~~~i~~~~~~yRV~vGpf~~~~~A~~~~~~L~~~g~~~~iv 76 (79)
T 1x60_A 7 SGLYKVQIGAFKVKANADSLASNAEAKGFDSIVLLKDGLYKVQIGAFSSKDNADTLAARAKNAGFDAIVI 76 (79)
T ss_dssp CCEEEEEEEEESCHHHHHHHHHHHHHHTCCEEEEEETTEEEEEEEEESSHHHHHHHHHHHHHHTSCCEEE
T ss_pred CCCEEEEEEEcCCHHHHHHHHHHHHhCCCCeEEecCCcEEEEEECCcCCHHHHHHHHHHHHHcCCceEEE
Confidence 34567778999999999999999998887632 23 3333 32 55677777778777664
No 140
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=23.95 E-value=1.3e+02 Score=22.76 Aligned_cols=28 Identities=14% Similarity=0.373 Sum_probs=23.9
Q ss_pred EEEEeCchhHHHHHHHHHhccCcceeeE
Q 015044 82 SVFVRDESGVVDLIDEVFARRGYNIESL 109 (414)
Q Consensus 82 SVlVeN~pGVLsRItgLFsRRGyNIeSL 109 (414)
-+++++.+.....+..+|.+.||++...
T Consensus 6 ilivdd~~~~~~~l~~~L~~~g~~v~~~ 33 (127)
T 3i42_A 6 ALIVEDYQAAAETFKELLEMLGFQADYV 33 (127)
T ss_dssp EEEECSCHHHHHHHHHHHHHTTEEEEEE
T ss_pred EEEEcCCHHHHHHHHHHHHHcCCCEEEE
Confidence 3578999999999999999999977643
No 141
>3la8_A SMU.1229, putative purine nucleoside phosphorylase; PUNA, glycosyltransferase, transferase; 1.80A {Streptococcus mutans} PDB: 3lba_A*
Probab=23.31 E-value=2.5e+02 Score=27.33 Aligned_cols=53 Identities=9% Similarity=0.043 Sum_probs=36.9
Q ss_pred ccCcCCHHHHHHHHHHHHHcCCcee-eE----eecC--chHHHHHHHHhCCCeEEEEEeCCCCCCC
Q 015044 286 LQHPSDYNVMQDAIAILCENDNICC-QV----MKSY--TKKQLITKLSRSGRKVIIATDHGVGAFL 344 (414)
Q Consensus 286 mGS~SD~~v~~~a~~~L~~~gi~~~-~V----~SaH--~p~~~~~~~~~~g~~ViIavA~G~sa~L 344 (414)
|.-..|....+.+.++.+++|+++. .+ .+.+ |+.+. +.++.-|.+++ ||++.-
T Consensus 188 m~~~yd~~Lr~~a~~aA~~~gi~~~~Gvy~~~~GP~FeT~AE~-r~~r~~GadaV-----gMst~p 247 (303)
T 3la8_A 188 MSNAYTADYREVAHQVADKIGIKLDEGVYIGVSGPSYETPAEI-RAFKTLGADAV-----GMSTVP 247 (303)
T ss_dssp CTTSSCHHHHHHHHHHHHHHTCCCEEEEEEECCCSSCCCHHHH-HHHHHTTCSEE-----ESSSHH
T ss_pred CCcccCHHHHHHHHHHHHHcCCceEEEEEEEeeCCccCCHHHH-HHHHHcCCCEE-----eccHHH
Confidence 4457788889999999999999877 43 2455 55543 56666677755 777653
No 142
>1kz1_A 6,7-dimethyl-8-ribityllumazine synthase; riboflavin biosynthesis, ligand binding, transferase; 2.00A {Schizosaccharomyces pombe} SCOP: c.16.1.1 PDB: 2a59_A* 2a58_A* 2a57_A* 1kyv_A* 1kyx_A* 1kyy_A* 1kz9_A 1kz4_A 1kz6_A
Probab=23.17 E-value=1.6e+02 Score=26.31 Aligned_cols=66 Identities=15% Similarity=0.199 Sum_probs=49.4
Q ss_pred CeEEecccCcCCH---HHHHHHHHHHHH-cCCcee-----eEeecC-chHHHHHHHHhCCCeEEEEEeCCCCCCCCcCCc
Q 015044 280 TDVIIVLQHPSDY---NVMQDAIAILCE-NDNICC-----QVMKSY-TKKQLITKLSRSGRKVIIATDHGVGAFLDKIDL 349 (414)
Q Consensus 280 ~~V~IimGS~SD~---~v~~~a~~~L~~-~gi~~~-----~V~SaH-~p~~~~~~~~~~g~~ViIavA~G~sa~Lp~~gv 349 (414)
.+++||.+.-.+. .-.+.|.+.|++ .|+..+ +|-++. -|.-..+-++..++|.+||.. -|
T Consensus 18 ~riaIV~arfn~~I~~~Ll~ga~~~l~~~~Gv~~~~i~v~~VPGafEiP~aa~~la~~~~yDavIaLG----------~V 87 (159)
T 1kz1_A 18 LRILIVHARGNLQAIEPLVKGAVETMIEKHDVKLENIDIESVPGSWELPQGIRASIARNTYDAVIGIG----------VL 87 (159)
T ss_dssp CCEEEEECCTTHHHHHHHHHHHHHHHHHHHCCCGGGEEEEECSSGGGHHHHHHHHHHHSCCSEEEEEE----------EE
T ss_pred CEEEEEEeeCcHHHHHHHHHHHHHHHHHHcCCCccceEEEECCcHHHHHHHHHHHHhcCCCCEEEEec----------cc
Confidence 5799999998887 777889999999 998633 555666 554444445556799999987 67
Q ss_pred cccCcc
Q 015044 350 LASGSP 355 (414)
Q Consensus 350 vAg~T~ 355 (414)
|=|-|+
T Consensus 88 IrG~T~ 93 (159)
T 1kz1_A 88 IKGSTM 93 (159)
T ss_dssp ECCSSS
T ss_pred ccCCch
Confidence 777776
No 143
>3cis_A Uncharacterized protein; alpha/beta hydrolase, ATP, universal stress protein, unknown function; HET: ATP; 2.90A {Mycobacterium tuberculosis} PDB: 2jax_A*
Probab=23.15 E-value=4.2e+02 Score=23.92 Aligned_cols=46 Identities=11% Similarity=0.234 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHc-----CCcee-eEeecCchH-HHHHHHHhCCCeEEEEEeCCCCC
Q 015044 294 VMQDAIAILCEN-----DNICC-QVMKSYTKK-QLITKLSRSGRKVIIATDHGVGA 342 (414)
Q Consensus 294 v~~~a~~~L~~~-----gi~~~-~V~SaH~p~-~~~~~~~~~g~~ViIavA~G~sa 342 (414)
..+++.+.+++. |++++ .+. ...+. .+++..+ +++.||.+++|.+.
T Consensus 83 ~l~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~I~~~a~--~~DliV~G~~g~~~ 135 (309)
T 3cis_A 83 LIDDALKVVEQASLRAGPPTVHSEIV-PAAAVPTLVDMSK--DAVLMVVGCLGSGR 135 (309)
T ss_dssp HHHHHHHHHHHHCSSSCCSCEEEEEE-SSCHHHHHHHHGG--GEEEEEEESSCTTC
T ss_pred HHHHHHHHHHHhcccCCCceEEEEEe-cCCHHHHHHHHhc--CCCEEEECCCCCcc
Confidence 345556666665 88888 443 34664 4444443 68999999877664
No 144
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=21.60 E-value=1.2e+02 Score=30.25 Aligned_cols=67 Identities=7% Similarity=-0.043 Sum_probs=45.6
Q ss_pred CCCCCeEEecccCcC----CHHHHHHHHHHHHHcCCcee---eEe------ecC---chHHHHHHHHhCCCeEEEEEeCC
Q 015044 276 TDPRTDVIIVLQHPS----DYNVMQDAIAILCENDNICC---QVM------KSY---TKKQLITKLSRSGRKVIIATDHG 339 (414)
Q Consensus 276 ~D~~~~V~IimGS~S----D~~v~~~a~~~L~~~gi~~~---~V~------SaH---~p~~~~~~~~~~g~~ViIavA~G 339 (414)
+.+.-.|+||+=|.. |....+.+.+.|+++|..+. .+. +.+ +..++.+.+.+..+++|+++- |
T Consensus 40 Lk~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~af~Dp~i~aI~~~r-G 118 (371)
T 3tla_A 40 LAVGDTIGFFSSSAPATVTAKNRFFRGVEFLQRKGFKLVSGKLTGKTDFYRSGTIKERAQEFNELVYNPDITCIMSTI-G 118 (371)
T ss_dssp CCTTCEEEEECSSCCHHHHTHHHHHHHHHHHHHTTCEEEECTTTTCCBTTBSSCHHHHHHHHHHHHTCTTEEEEEESC-C
T ss_pred CCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEcc-c
Confidence 444457999976643 56788999999999999865 221 111 225566667767789999999 5
Q ss_pred CCCC
Q 015044 340 VGAF 343 (414)
Q Consensus 340 ~sa~ 343 (414)
..++
T Consensus 119 Gyga 122 (371)
T 3tla_A 119 GDNS 122 (371)
T ss_dssp CSCG
T ss_pred cccH
Confidence 4443
No 145
>3ab8_A Putative uncharacterized protein TTHA0350; tandem-type universal stress protein, unknown function; HET: ATP; 1.70A {Thermus thermophilus} PDB: 3ab7_A*
Probab=21.55 E-value=2.7e+02 Score=24.44 Aligned_cols=45 Identities=4% Similarity=-0.006 Sum_probs=29.8
Q ss_pred HHHHHHHHHHcCCcee-eEeecCchHHHHHHHHhCCCeEEEEEeCCCC
Q 015044 295 MQDAIAILCENDNICC-QVMKSYTKKQLITKLSRSGRKVIIATDHGVG 341 (414)
Q Consensus 295 ~~~a~~~L~~~gi~~~-~V~SaH~p~~~~~~~~~~g~~ViIavA~G~s 341 (414)
.+++.+.++..|++++ .+. ...+.+.+-.+ ..+++.+|.+.+|.+
T Consensus 76 l~~~~~~~~~~g~~~~~~~~-~g~~~~~I~~~-~~~~dliV~G~~g~~ 121 (268)
T 3ab8_A 76 LERVRQSALAAGVAVEAVLE-EGVPHEAILRR-ARAADLLVLGRSGEA 121 (268)
T ss_dssp HHHHHHHHHHTTCCEEEEEE-EECHHHHHHHH-HTTCSEEEEESSCTT
T ss_pred HHHHHHHHHhCCCCeEEEEe-cCCHHHHHHhh-ccCCCEEEEeccCCC
Confidence 4445555667799988 443 23664444444 668999999987876
No 146
>1zl0_A Hypothetical protein PA5198; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; HET: TLA PEG; 1.10A {Pseudomonas aeruginosa} SCOP: c.8.10.1 c.23.16.7 PDB: 1zrs_A 2aum_A 2aun_A
Probab=21.37 E-value=1.5e+02 Score=28.63 Aligned_cols=63 Identities=10% Similarity=0.031 Sum_probs=43.6
Q ss_pred CeEEecccCc-CCHHHHHHHHHHHHHcCCcee---eEe------ecC---chHHHHHHHHhCCCeEEEEEeCCCCCC
Q 015044 280 TDVIIVLQHP-SDYNVMQDAIAILCENDNICC---QVM------KSY---TKKQLITKLSRSGRKVIIATDHGVGAF 343 (414)
Q Consensus 280 ~~V~IimGS~-SD~~v~~~a~~~L~~~gi~~~---~V~------SaH---~p~~~~~~~~~~g~~ViIavA~G~sa~ 343 (414)
-.|+||.=|. -|....+.+.+.|+++|..+. .+. +.+ +..++.+.+.+..+++|+++- |..++
T Consensus 18 d~I~ivaPSs~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~r-GGyga 93 (311)
T 1zl0_A 18 GRVALIAPASAIATDVLEATLRQLEVHGVDYHLGRHVEARYRYLAGTVEQRLEDLHNAFDMPDITAVWCLR-GGYGC 93 (311)
T ss_dssp SEEEEECCSBCCCHHHHHHHHHHHHHTTCCEEECTTTTCCBTTBSSCHHHHHHHHHHHHHSTTEEEEEESC-CSSCG
T ss_pred CEEEEEeCCCCCCHHHHHHHHHHHHhCCCEEEECccccccccccCCCHHHHHHHHHHHHhCCCCCEEEEcc-CCcCH
Confidence 3688887655 366778999999999998765 221 111 225666667777889999999 54443
No 147
>2jsx_A Protein NAPD; TAT, proofreading, cytoplasm, chaperone; NMR {Escherichia coli K12} PDB: 2pq4_A
Probab=21.31 E-value=3.2e+02 Score=21.97 Aligned_cols=65 Identities=23% Similarity=0.263 Sum_probs=43.5
Q ss_pred EEEEEeCchhHHHHHHHHHhccCcceeeEEeee-cCCCcEEEEEEeC-chhHHHHHHHHHhcCccEEEEEe
Q 015044 81 ISVFVRDESGVVDLIDEVFARRGYNIESLAVSG-NKDKGLFTIVVSG-TDRVLQQVIEQLQKLVNVLKVED 149 (414)
Q Consensus 81 LSVlVeN~pGVLsRItgLFsRRGyNIeSLtVg~-Ted~~iiTIVV~g-de~~veQl~kQL~KLidVikV~d 149 (414)
=|++++=+||-+..|..-+..- ...-+.. +.+.|.+-+++++ +.+.+.+.++++++|-.|+.+.-
T Consensus 8 sslvV~~~p~~~~~V~~~L~~i----pgvEi~~~~~~~GkiVV~iEa~~~~~l~~~i~~I~~i~GVlst~l 74 (95)
T 2jsx_A 8 CSLVVQAKSERISDISTQLNAF----PGCEVAVSDAPSGQLIVVVEAEDSETLIQTIESVRNVEGVLAVSL 74 (95)
T ss_dssp EEEEEEECTTSHHHHHHHHTTS----TTEEEEEEETTTTEEEEEEEESSHHHHHHHHHHHTTSTTEEEEEE
T ss_pred EEEEEEECCCCHHHHHHHHHCC----CCeEEEEecCCCCCEEEEEEeCCHHHHHHHHHHHhcCCCccEEeE
Confidence 5788888999999999888754 3333433 3345554444432 23345556699999999999875
No 148
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=21.23 E-value=78 Score=29.30 Aligned_cols=111 Identities=19% Similarity=0.136 Sum_probs=65.4
Q ss_pred eEEecccCcCCHHHHHHHHHHHHHcCCcee-eEeecC--chHHHHHHH-HhCCCeEEEEEeCCCCCCCCcCCccccCccE
Q 015044 281 DVIIVLQHPSDYNVMQDAIAILCENDNICC-QVMKSY--TKKQLITKL-SRSGRKVIIATDHGVGAFLDKIDLLASGSPV 356 (414)
Q Consensus 281 ~V~IimGS~SD~~v~~~a~~~L~~~gi~~~-~V~SaH--~p~~~~~~~-~~~g~~ViIavA~G~sa~Lp~~gvvAg~T~V 356 (414)
.++++.+...-.. .+.+++.+++...+ .|.... ...+..+.+ +..|++|||+-- |.+..|- .-+ ..+|
T Consensus 14 ~ii~i~~~~~L~~---~~~~i~~e~~~~~~I~vi~~~le~av~~a~~~~~~~~~dVIISRG-gta~~Lr--~~~--~iPV 85 (225)
T 2pju_A 14 PVIWTVSVTRLFE---LFRDISLEFDHLANITPIQLGFEKAVTYIRKKLANERCDAIIAAG-SNGAYLK--SRL--SVPV 85 (225)
T ss_dssp CEEEEECCHHHHH---HHHHHHTTTTTTCEEEEECCCHHHHHHHHHHHTTTSCCSEEEEEH-HHHHHHH--TTC--SSCE
T ss_pred CEEEEEchHHHHH---HHHHHHHhhCCCceEEEecCcHHHHHHHHHHHHhcCCCeEEEeCC-hHHHHHH--hhC--CCCE
Confidence 4555554444333 44446667777666 554333 334444443 334699999865 6655555 221 1338
Q ss_pred EEecCcCCCCCCcceee-ccCCCCC--eEEEEecCCcchHHHHHHHHHhcc
Q 015044 357 IGVPVRASGVTGFPHQF-VEMCPKH--AILLVPVNDAKGAARQAMIICDMV 404 (414)
Q Consensus 357 IgVP~~~~~l~G~daLl-vqMP~Gv--pVatV~Id~~~nAA~~A~~IL~~~ 404 (414)
|-+|++. .|.|- ++.+... .+|+|+-.+....+-.-..+|++.
T Consensus 86 V~I~vs~-----~Dil~aL~~a~~~~~kIavVg~~~~~~~~~~i~~ll~~~ 131 (225)
T 2pju_A 86 ILIKPSG-----YDVLQFLAKAGKLTSSIGVVTYQETIPALVAFQKTFNLR 131 (225)
T ss_dssp EEECCCH-----HHHHHHHHHTTCTTSCEEEEEESSCCHHHHHHHHHHTCC
T ss_pred EEecCCH-----HHHHHHHHHHHhhCCcEEEEeCchhhhHHHHHHHHhCCc
Confidence 8888764 66555 4444332 499998888887776666777653
No 149
>4eys_A MCCC family protein; MCCF like, serine peptidase, csgid, structural genomics, NIA national institute of allergy and infectious diseases; HET: AMP; 1.58A {Streptococcus pneumoniae} PDB: 4e94_A*
Probab=21.17 E-value=90 Score=30.54 Aligned_cols=62 Identities=16% Similarity=0.064 Sum_probs=41.2
Q ss_pred eEEecccCcC------CHHHHHHHHHHHHHcCCcee---eEee------cC---chHHHHHHHHhCCCeEEEEEeCCCCC
Q 015044 281 DVIIVLQHPS------DYNVMQDAIAILCENDNICC---QVMK------SY---TKKQLITKLSRSGRKVIIATDHGVGA 342 (414)
Q Consensus 281 ~V~IimGS~S------D~~v~~~a~~~L~~~gi~~~---~V~S------aH---~p~~~~~~~~~~g~~ViIavA~G~sa 342 (414)
.|+||+=|.. +....+.+.+.|+++|..+. .+.. .+ +..++.+.+.+..+++|+++- |..+
T Consensus 7 ~I~ivaPSs~~~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~r-GG~g 85 (346)
T 4eys_A 7 TIGIVSLSSGIIGEDFVKHEVDLGIQRLKDLGLNPIFLPHSLKGLDFIKDHPEARAEDLIHAFSDDSIDMILCAI-GGDD 85 (346)
T ss_dssp EEEEECSSCCGGGSGGGHHHHHHHHHHHHHTTCEEEECTTTTSCHHHHHHCHHHHHHHHHHHHHCTTCCEEEECC-CCSC
T ss_pred EEEEEeCCCcccccccCHHHHHHHHHHHHhCCCEEEECCchhccCCccCCCHHHHHHHHHHHhhCCCCCEEEEcc-cccC
Confidence 6888864432 35678899999999999765 1211 11 225566666777889999999 5444
Q ss_pred C
Q 015044 343 F 343 (414)
Q Consensus 343 ~ 343 (414)
+
T Consensus 86 ~ 86 (346)
T 4eys_A 86 T 86 (346)
T ss_dssp G
T ss_pred H
Confidence 3
No 150
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=20.70 E-value=2.9e+02 Score=21.36 Aligned_cols=30 Identities=7% Similarity=0.245 Sum_probs=25.2
Q ss_pred EEEEeCchhHHHHHHHHHhccC-cceeeEEe
Q 015044 82 SVFVRDESGVVDLIDEVFARRG-YNIESLAV 111 (414)
Q Consensus 82 SVlVeN~pGVLsRItgLFsRRG-yNIeSLtV 111 (414)
-+++++.+-....+..+|.+.| |++....-
T Consensus 23 ilivdd~~~~~~~l~~~L~~~g~~~v~~~~~ 53 (146)
T 4dad_A 23 ILVASEDASRLAHLARLVGDAGRYRVTRTVG 53 (146)
T ss_dssp EEEECSCHHHHHHHHHHHHHHCSCEEEEECC
T ss_pred EEEEeCCHHHHHHHHHHHhhCCCeEEEEeCC
Confidence 3568999999999999999999 98886443
No 151
>3rf7_A Iron-containing alcohol dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: NAD EPE; 2.12A {Shewanella denitrificans}
Probab=20.54 E-value=27 Score=34.68 Aligned_cols=78 Identities=10% Similarity=0.072 Sum_probs=43.0
Q ss_pred eEEecccCcCCHHHHHHHHHHHHHcCCceeeEeecC-ch-----HHHHHHHHhCC---CeEEEEEeCCCCCCCCcCCccc
Q 015044 281 DVIIVLQHPSDYNVMQDAIAILCENDNICCQVMKSY-TK-----KQLITKLSRSG---RKVIIATDHGVGAFLDKIDLLA 351 (414)
Q Consensus 281 ~V~IimGS~SD~~v~~~a~~~L~~~gi~~~~V~SaH-~p-----~~~~~~~~~~g---~~ViIavA~G~sa~Lp~~gvvA 351 (414)
++.||++..--. ....+.|+.-|+.+..+.... .| .+..+.+++.+ .++|||+=||..--+. ..+|
T Consensus 55 ~~liVtd~~~~~---~~l~~~L~~~g~~~~~f~~v~~~pt~~~v~~~~~~~~~~~~~~~D~IIavGGGS~iD~A--K~iA 129 (375)
T 3rf7_A 55 FVVFLVDDVHQH---KPLAARVPNKAHDLVIYVNVDDEPTTVQVDELTAQVKAFNTKLPVSVVGLGGGSTMDLA--KAVS 129 (375)
T ss_dssp CEEEEEEGGGTT---SHHHHHSCCCTTSEEEEECCSSCCBHHHHHHHHHHHHHHCSSCCSEEEEEESHHHHHHH--HHHH
T ss_pred eEEEEECchhhh---hHHHHHHHhcCCeEEEEeCCCCCCCHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHH--HHHH
Confidence 566776543211 123344444466655332222 33 44555566666 8999999855544455 4444
Q ss_pred cCc--------------------cEEEecCcC
Q 015044 352 SGS--------------------PVIGVPVRA 363 (414)
Q Consensus 352 g~T--------------------~VIgVP~~~ 363 (414)
... ++|.||+..
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~P~i~IPTTa 161 (375)
T 3rf7_A 130 LMLTNPGSSSEYQGWDLIKNPAVHHIGIPTVS 161 (375)
T ss_dssp HHTSSCSCGGGGCEESCCCSCCCCEEEEESSC
T ss_pred HHHhCCCCHHHhhccccccCCCCCEEEEcCCC
Confidence 422 399999865
Done!