BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015046
(414 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q12010|YO092_YEAST Uncharacterized membrane protein YOL092W OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YOL092W PE=1
SV=1
Length = 308
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 57/95 (60%), Gaps = 1/95 (1%)
Query: 310 IGSYLGWAMAAIYMGGRLPQICLNIRRGHVEGLNPLMFVFALVGNATYVASILVNSVDWS 369
+ G+ A +Y+G R+PQI LN +R EG++ L F+FA +GN T++ S++V S+DW
Sbjct: 211 MAQIFGYLSALLYLGSRIPQILLNFKRKSCEGISFLFFLFACLGNTTFIFSVIVISLDWK 270
Query: 370 RIRPNLPWLADAGGCVLLDSFILIQ-FIYYRYRSF 403
+ N WL + G + +D I Q FIY R + F
Sbjct: 271 YLIMNASWLVGSIGTLFMDFVIFSQFFIYKRNKKF 305
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 53 VPQIITNYKEKSTEGLSIAFLTTWILGDLFNVFGCLLEPATLPTQYYMAMLYTLTTVILT 112
VPQI N+ KS++GLS+ F+ W+ GD+FN+ G +++ L T +A YT+ +IL
Sbjct: 30 VPQIYENFYRKSSDGLSLLFVVLWLAGDVFNLMGAVMQ-HLLSTMIILAAYYTVADIILL 88
Query: 113 AQTMYYSH 120
Q ++Y +
Sbjct: 89 GQCLWYDN 96
Score = 32.7 bits (73), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 27/50 (54%)
Query: 40 LGLASVISWGVAEVPQIITNYKEKSTEGLSIAFLTTWILGDLFNVFGCLL 89
G S + + + +PQI+ N+K KS EG+S F LG+ +F ++
Sbjct: 215 FGYLSALLYLGSRIPQILLNFKRKSCEGISFLFFLFACLGNTTFIFSVIV 264
>sp|P38279|RTC2_YEAST Protein RTC2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=RTC2 PE=1 SV=1
Length = 296
Score = 75.1 bits (183), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 41 GLASVISWGVAEVPQIITNYKEKSTEGLSIAFLTTWILGDLFNVFGCLLEPATLPTQYYM 100
G S+ W V VPQI N++ +S EGLS+ F+ W+LGD+FNV G +++ LPT +
Sbjct: 18 GSISICCWIVVFVPQIYENFRRQSAEGLSLLFIVLWLLGDIFNVMGAMMQ-NLLPTMIIL 76
Query: 101 AMLYTLTTVILTAQTMYYSH----IYPRLKHNKRP 131
A YTL +IL Q M+Y I +K N P
Sbjct: 77 AAYYTLADLILLIQCMWYDKEKKSILQEVKKNVDP 111
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 54/97 (55%), Gaps = 11/97 (11%)
Query: 314 LGWAMAAIYMGGRLPQICLNIRRGHVEGLNPLMFVFALVGNATYVASILVNSVDWSRIRP 373
LG+ A +Y+G R+PQI LN +R EG++ L F+FA +GN +++ S+L S
Sbjct: 211 LGYLSAILYLGSRIPQIVLNFKRKSCEGVSFLFFLFACLGNTSFIISVLSAS-------- 262
Query: 374 NLPWLADAGGCVLLDSFILIQFIYYRYRSFQEDKHEN 410
WL + G +L+D + IQF Y +++ +N
Sbjct: 263 ---WLIGSAGTLLMDFTVFIQFFLYAKPKYEKILIDN 296
Score = 34.7 bits (78), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 40 LGLASVISWGVAEVPQIITNYKEKSTEGLSIAFLTTWILGD 80
LG S I + + +PQI+ N+K KS EG+S F LG+
Sbjct: 211 LGYLSAILYLGSRIPQIVLNFKRKSCEGVSFLFFLFACLGN 251
>sp|Q95XZ6|LAAT1_CAEEL Lysosomal amino acid transporter 1 OS=Caenorhabditis elegans
GN=laat-1 PE=1 SV=2
Length = 311
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 49/90 (54%)
Query: 310 IGSYLGWAMAAIYMGGRLPQICLNIRRGHVEGLNPLMFVFALVGNATYVASILVNSVDWS 369
+G +G A Y GGR+PQI N R EGL+ MF + N TY S+L+ + W
Sbjct: 200 LGYIIGSMAAVCYFGGRIPQIIKNYRHSSCEGLSLTMFYIIVAANFTYGISVLLATTSWL 259
Query: 370 RIRPNLPWLADAGGCVLLDSFILIQFIYYR 399
+ +LPWLA + GC D+ I+ Q+ YR
Sbjct: 260 YLLRHLPWLAGSLGCCCFDAVIISQYYLYR 289
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 4 FKSEVAVCPSNLHCAEWARIYMEYCLCSVRDGVSLGLGLASVISWGVAEVPQIITNYKEK 63
F E A C + +W + C+ + + +GL S+ W + PQ+ NYK K
Sbjct: 12 FGEEDANCTQGI---QWIKDVFTDCVDTDLKLLGFIIGLISLALWLIPLFPQLWQNYKTK 68
Query: 64 STEGLSIAFLTTWILGDLFNVFGCLLEPATLPTQYYMAMLYTLTTVILTAQTMYYSHIYP 123
EGLS+AFL W++GD N+ G +L P Q + + Y + ++L Q YY IY
Sbjct: 69 KCEGLSLAFLFFWLVGDTCNMLGAILTNQQ-PIQKIIGVYYIIQDLVLWTQYGYYLKIYN 127
Query: 124 R-LKHNKRPQTGLMP 137
R + R T ++P
Sbjct: 128 RPTTSSARSNTIVVP 142
>sp|Q10482|STM1_SCHPO Seven transmembrane protein 1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=stm1 PE=1 SV=1
Length = 271
Score = 58.5 bits (140), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 319 AAIYMGGRLPQICLNIRRGHVEGLNPLMFVFALVGNATYVASILV--NSVDWSRIRPNLP 376
+ +Y R+PQI N + EGL+ + FV A VGN +Y SILV S + NLP
Sbjct: 186 SVLYFCARIPQIIKNHKAKSTEGLSIIFFVLASVGNTSYAFSILVFPASDYLNYTYANLP 245
Query: 377 WLADAGGCVLLDSFILIQFIYYR 399
W+ A + LD +I QFI YR
Sbjct: 246 WILGAFSTIFLDIYIFYQFIKYR 268
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 56/124 (45%), Gaps = 10/124 (8%)
Query: 40 LGLASVISWGVAEVPQIITNYKEKSTEGLSIAFLTTWILGDLFNVFGCLLEPATLPTQYY 99
LG S+ W V +PQ++ NYK +S E +S FL W++GD FNV G + + T
Sbjct: 21 LGALSLGCWVVLLIPQLLENYKNQSGESISDLFLIIWLIGDFFNVLGSIYGNVS-STVLV 79
Query: 100 MAMLYTLTTVILTAQTMYYSHIYPRLKHNKRPQTGLMPNQPEAAEKTRPSSNGVGEQVNS 159
++ Y ++ L Q YY R K +R + + E ++R G+ +
Sbjct: 80 LSFYYIVSDSTLLMQIYYY-----RWKAARR----IASREHEPLLQSRSLEEGLHAPIGK 130
Query: 160 SGKW 163
W
Sbjct: 131 QQIW 134
Score = 42.4 bits (98), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 41 GLASVISWGVAEVPQIITNYKEKSTEGLSIAFLTTWILGDLFNVFGCLLEPATLPTQYYM 100
G S + + A +PQII N+K KSTEGLSI F +G+ F L+ PA+ Y
Sbjct: 182 GCISSVLYFCARIPQIIKNHKAKSTEGLSIIFFVLASVGNTSYAFSILVFPASDYLNYTY 241
Query: 101 A----MLYTLTTVILTAQTMY 117
A +L +T+ L Y
Sbjct: 242 ANLPWILGAFSTIFLDIYIFY 262
>sp|Q6ZP29|LAAT1_HUMAN Lysosomal amino acid transporter 1 homolog OS=Homo sapiens GN=PQLC2
PE=1 SV=1
Length = 291
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 55/122 (45%), Gaps = 11/122 (9%)
Query: 11 CPSNLHCAEWARIYMEYCLCSVRDGVSLGLGLASVISWGVAEVPQIITNYKEKSTE-GLS 69
CPS +W + C D S+GLGL S++ + + PQ I YK + + LS
Sbjct: 14 CPSG--SIQWIWDVLGECAQDGWDEASVGLGLISILCFAASTFPQFIKAYKTGNMDQALS 71
Query: 70 IAFLTTWILGDLFNVFGCLLEPATLPTQYYMAMLYTLTTVILTAQTMYYSHIYPRLKHNK 129
+ FL WI GD N+ G L LP Q Y A+ Y L +++ YY K
Sbjct: 72 LWFLLGWIGGDSCNLIGSFLAD-QLPLQTYTAVYYVLADLVMLTLYFYY-------KFRT 123
Query: 130 RP 131
RP
Sbjct: 124 RP 125
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 84/194 (43%), Gaps = 28/194 (14%)
Query: 232 LLGGHISTQSPPSTNTKTMLCLVPIMIFLTTFNFHYSNTEHDTVFEKPNKGFVI-----Q 286
L+G ++ Q P T T L +++ T F+Y ++ P ++
Sbjct: 86 LIGSFLADQLPLQTYTAVYYVLADLVML--TLYFYYKFRTRPSLLSAPINSVLLFLMGMA 143
Query: 287 VRRKLLQVSG----------GLLQESVTGGSSG------IGSYLGWAMAAIYMGGRLPQI 330
LL +G G SV GS IG +G + +Y+ RLPQI
Sbjct: 144 CATPLLSAAGPVAAPREAFRGRALLSVESGSKPFTRQEVIGFVIGSISSVLYLLSRLPQI 203
Query: 331 CLNIRRGHVEGLNPLMFVFALVGNATYVASILVNS-----VDWSRIRPNLPWLADAGGCV 385
N R +G++ +F ++GN Y S+L+ + + S + +LPWL + G +
Sbjct: 204 RTNFLRKSTQGISYSLFALVMLGNTLYGLSVLLKNPEEGQSEGSYLLHHLPWLVGSLGVL 263
Query: 386 LLDSFILIQFIYYR 399
LLD+ I IQF+ YR
Sbjct: 264 LLDTIISIQFLVYR 277
>sp|Q5ZJX0|LAAT1_CHICK Lysosomal amino acid transporter 1 homolog OS=Gallus gallus
GN=PQLC2 PE=2 SV=1
Length = 303
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 5/95 (5%)
Query: 310 IGSYLGWAMAAIYMGGRLPQICLNIRRGHVEGLNPLMFVFALVGNATYVASILVNS---- 365
IG +G + +Y+ RLPQI N RR G++ L+F ++GN Y S+L+ +
Sbjct: 189 IGFAIGSISSVLYLCSRLPQIYTNYRRKSTAGVSFLLFALVMLGNLLYGTSVLLKNPEPG 248
Query: 366 -VDWSRIRPNLPWLADAGGCVLLDSFILIQFIYYR 399
+ I +LPWL + G + LD I QF+ YR
Sbjct: 249 QSEGDYILHHLPWLIGSLGVLSLDVIISFQFLAYR 283
Score = 34.7 bits (78), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 26/47 (55%)
Query: 36 VSLGLGLASVISWGVAEVPQIITNYKEKSTEGLSIAFLTTWILGDLF 82
+ +G S + + + +PQI TNY+ KST G+S +LG+L
Sbjct: 189 IGFAIGSISSVLYLCSRLPQIYTNYRRKSTAGVSFLLFALVMLGNLL 235
>sp|Q06328|YD352_YEAST Vacuolar integral membrane protein YDR352W OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YDR352W PE=1
SV=1
Length = 317
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 305 GGSSGIGSYLGWAMAAIYMGGRLPQICLNIRRGHVEGLNPLMFVFALVGNATYVASI--- 361
G +S +G+ L W A+ Y+G R+PQ+ N R +GL+P +F L+ N TY SI
Sbjct: 179 GKNSQLGTILSWIGASFYVGARIPQLIKNYNRKSTDGLSPFLFATTLLCNITYNLSIFTS 238
Query: 362 ---LVNSVDWSRIRPNLPWLADAGGCVLLDSFILIQF 395
L N I LP++ + G + D Q+
Sbjct: 239 CRFLDNQNKREFIVNELPFIFGSAGTIAFDLIYFYQY 275
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 8/108 (7%)
Query: 50 VAEVPQIITNYKEKSTEGLSIAFLTTWILGDLFNVFGCLLEPATLPTQYYMAMLYTLTTV 109
++ PQII Y++KS +GLS FL W+ GD+ ++ G L L Q +A+ + L
Sbjct: 25 ISLFPQIIETYRDKSVDGLSPYFLLAWLCGDITSLIGAKL-TGQLLFQILLAIYFLLNDS 83
Query: 110 ILTAQTMYYSHIYPR----LKHNKRPQTGLMPNQPEAAEKTRPSSNGV 153
+ Q YY ++ + H +P L+P E E R + +
Sbjct: 84 FVCGQYYYYGVLHENKLATVGHEPKP---LLPELVENGELLREEEDMI 128
Score = 32.7 bits (73), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 7/50 (14%)
Query: 42 LASVISW-GV-----AEVPQIITNYKEKSTEGLS-IAFLTTWILGDLFNV 84
L +++SW G A +PQ+I NY KST+GLS F TT + +N+
Sbjct: 184 LGTILSWIGASFYVGARIPQLIKNYNRKSTDGLSPFLFATTLLCNITYNL 233
>sp|Q8C4N4|LAAT1_MOUSE Lysosomal amino acid transporter 1 homolog OS=Mus musculus GN=Pqlc2
PE=2 SV=1
Length = 293
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 59/127 (46%), Gaps = 11/127 (8%)
Query: 6 SEVAVCPSNLHCAEWARIYMEYCLCSVRDGVSLGLGLASVISWGVAEVPQIITNYKEKST 65
S + CP+ +W C D S+GLGL S++ + + PQ I K +
Sbjct: 9 SNFSTCPNG--SVQWIWDVFGECAQDGWDEASVGLGLVSILCFAASTFPQYIKACKTGNM 66
Query: 66 E-GLSIAFLTTWILGDLFNVFGCLLEPATLPTQYYMAMLYTLTTVILTAQTMYYSHIYPR 124
+ LS+ FL WI GD N+ G L LP Q Y A+ Y L +++ T+Y+ +
Sbjct: 67 DQALSLWFLLGWIGGDSCNLIGSFLADQ-LPLQTYTAVYYVLADLMML--TLYFHY---- 119
Query: 125 LKHNKRP 131
K KRP
Sbjct: 120 -KFKKRP 125
Score = 40.0 bits (92), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 84/200 (42%), Gaps = 40/200 (20%)
Query: 232 LLGGHISTQSPPSTNTKTMLCLVPIMIFLTTFNFHYSNTEHDTVFEKPNKGFVIQVR--- 288
L+G ++ Q P T T L +M+ T FHY + + P ++ +
Sbjct: 86 LIGSFLADQLPLQTYTAVYYVLADLMML--TLYFHYKFKKRPSPLSAPINSVLLFILGTV 143
Query: 289 ---------------------RKLLQVSGG---LLQESVTGGSSGIGSYLGWAMAAIYMG 324
R LL V G ++ V IG +G A + +Y+
Sbjct: 144 CITPLLSSTDPVAVPREGFRGRTLLSVEPGNKPFTKKEV------IGFVIGSASSLLYLL 197
Query: 325 GRLPQICLNIRRGHVEGLNPLMFVFALVGNATYVASIL-----VNSVDWSRIRPNLPWLA 379
RLPQI N R +G++ +F ++GN Y S+L V + S + +LPWL
Sbjct: 198 SRLPQIRTNFIRQSTQGISYSLFALVMLGNTLYGLSVLLKNPEVGQSEGSYLLHHLPWLV 257
Query: 380 DAGGCVLLDSFILIQFIYYR 399
+ G +LLD+ I IQF+ YR
Sbjct: 258 GSLGVLLLDTIISIQFLVYR 277
>sp|A1A4F0|CC055_HUMAN Putative uncharacterized protein C3orf55 OS=Homo sapiens GN=C3orf55
PE=2 SV=2
Length = 135
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 51/106 (48%), Gaps = 17/106 (16%)
Query: 55 QIITNYKE-KSTEGLSIAFLTTWILGDLFNVFGCLLEPATLPTQYYMAMLYTLTTVILTA 113
Q+ Y+ + E +S+ FL WI GDL N GC L LP Q + A+ T VI+ +
Sbjct: 29 QLFVAYRNGRVDEAVSLGFLDCWIGGDLTNFKGCYLTNQ-LPIQIFTAIFDMNTDVIILS 87
Query: 114 QTMYYSHIYPRLKHNKRPQTGLMPNQPE------AAEKTRPSSNGV 153
Q MYY RLK+ K+ M QP+ EK R S GV
Sbjct: 88 QFMYY-----RLKNQKKK----MIFQPQLFKDSITREKVRLSLWGV 124
>sp|Q5M880|PQLC1_RAT PQ-loop repeat-containing protein 1 OS=Rattus norvegicus GN=Pqlc1
PE=2 SV=2
Length = 271
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 40 LGLASVISWGVAEVPQIITNYKEKSTEGLSIAFLTTWILGDLFNVFGCLLEPATLPTQYY 99
LG +V++ + VPQ+ NY+ +STEG+S+ + W GD F LL A P Q+
Sbjct: 174 LGFLAVLTEAMLGVPQLYRNYRHRSTEGMSLKMVLMWTSGDTFKTAYFLLNGA--PLQFS 231
Query: 100 M-AMLYTLTTVILTAQTMYYSH 120
+ +L + + + Q ++H
Sbjct: 232 VCGLLQVMVDLAILGQAYAFAH 253
>sp|Q80XM9|PQLC1_MOUSE PQ-loop repeat-containing protein 1 OS=Mus musculus GN=Pqlc1 PE=2
SV=1
Length = 271
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 19/113 (16%)
Query: 40 LGLASVISWGVAEVPQIITNYKEKSTEGLSIAFLTTWILGDLFNVFGCLLEPATLPTQYY 99
LG +V++ + VPQ+ NY +STEG+S+ + W GD F LL A P Q+
Sbjct: 174 LGFLAVLTEAMLGVPQLYRNYCHRSTEGMSLKMVLMWTSGDTFKTAYFLLNGA--PLQFS 231
Query: 100 M-AMLYTLTTVILTAQTMYYSHIYPRLKHNKRPQTGLMPNQPEAAEKTRPSSN 151
+ +L + +++ Q ++H H ++P AA P+S
Sbjct: 232 VCGLLQVMVDLVILGQAYAFAH------HPQKP----------AAHAVHPAST 268
>sp|Q03687|YMP0_YEAST Uncharacterized membrane protein YMR010W OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YMR010W PE=1
SV=1
Length = 405
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 75/160 (46%), Gaps = 9/160 (5%)
Query: 21 ARIYMEYCLCSVRDGVSLGLGLASVI-SWGVAE-----VPQIITNYKEKSTEGLSIAFLT 74
+I + + + ++ + SL GL S+I S G+ +PQI YK KS +G + L
Sbjct: 231 VQILVTFFISNILNWDSLAQGLGSIIGSLGLLVESLLPLPQIAILYKLKSVQGFKLILLV 290
Query: 75 TWILGDLFNVFGCLLEPATLPTQYYMAMLYTLT-TVILTAQTMYYSHIYPRLKHNKRPQT 133
+W+ GD + + + + + L+ ++ + Q +YY + YP+L+H P
Sbjct: 291 SWLCGDTLKITYLIFGAKNISALFVIFALFQMSLDFYIGGQYIYYRYYYPKLRHQHHPND 350
Query: 134 GLMPNQPEAAEKTRPS-SNGVGEQVNSSGKWKIDSDTSDT 172
P+ + +E N + + V + K + +DTSD+
Sbjct: 351 SNSPSDEDESEMYELDLFNTLQKDVEKALK-QDSNDTSDS 389
>sp|Q9VCR7|CTNS_DROME Cystinosin homolog OS=Drosophila melanogaster GN=CG17119 PE=1 SV=2
Length = 397
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 37 SLGLGLASVISWGVAEVPQIITNYKEKSTEGLSIAFLTTWILG-DLFNVFGC 87
S+ G ++W V+ PQI +NY+ KS EGL+ FL I+G L+++F C
Sbjct: 132 SIIFGWVYFVAWSVSFYPQIWSNYRRKSVEGLNFDFLALNIVGFTLYSMFNC 183
>sp|Q10227|YD03_SCHPO Uncharacterized protein C2E12.03c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC2E12.03c PE=4 SV=1
Length = 283
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 40 LGLASVISWGVAEVPQIITNYKEKSTEGLSIAFLTTWILGDL 81
+ + W V +PQII NY+ KSTEGL F+ +W++ +
Sbjct: 22 FAILGTVCWCVQLIPQIIKNYRAKSTEGLDTLFILSWVVASI 63
>sp|Q8N2U9|PQLC1_HUMAN PQ-loop repeat-containing protein 1 OS=Homo sapiens GN=PQLC1 PE=2
SV=1
Length = 271
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Query: 40 LGLASVISWGVAEVPQIITNYKEKSTEGLSIAFLTTWILGDLFNVFGCLLEPATLPTQYY 99
LG +V++ + VPQ+ N++ +STEG+SI + W GD F LL+ A P Q+
Sbjct: 174 LGFLAVLTEAMLGVPQLYRNHRHQSTEGMSIKMVLMWTSGDAFKTAYFLLKGA--PLQFS 231
Query: 100 M-AMLYTLTTVILTAQTMYYSHIYPRLKHNKRP 131
+ +L L + + Q Y +H ++P
Sbjct: 232 VCGLLQVLVDLAILGQA------YAFARHPQKP 258
>sp|Q0VCC1|PQLC1_BOVIN PQ-loop repeat-containing protein 1 OS=Bos taurus GN=PQLC1 PE=2
SV=1
Length = 253
Score = 40.0 bits (92), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 40 LGLASVISWGVAEVPQIITNYKEKSTEGLSIAFLTTWILGDLFNVFGCLLEPATLPTQYY 99
LG +V++ + VPQ+ N++ +STEG+SI + W GD F LL A P Q+
Sbjct: 156 LGFLAVLTEAMLGVPQLYRNHRHQSTEGMSIKMVLMWTSGDTFKTAYFLLNGA--PLQFS 213
Query: 100 M-AMLYTLTTVILTAQTMYYSHIYP 123
+ +L L + + Q ++ YP
Sbjct: 214 VCGLLQVLVDLAILGQAYVFTR-YP 237
>sp|Q6NRS2|PQLC1_XENLA PQ-loop repeat-containing protein 1 OS=Xenopus laevis GN=pqlc1 PE=2
SV=1
Length = 250
Score = 37.4 bits (85), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
Query: 40 LGLASVISWGVAEVPQIITNYKEKSTEGLSIAFLTTWILGDLFNVFGCLLEPATLPTQYY 99
LG +V + + VPQ+ N++ STEG+SI + W GD F +L A P Q+
Sbjct: 156 LGFLAVFTEALLGVPQLYRNHQNYSTEGMSIKMVLMWTSGDTFKSAYFVLNQA--PFQFS 213
Query: 100 MAMLYTLTTVILTAQTMYYSHIYPR 124
+ L + I +Y YP+
Sbjct: 214 ICGLLQVFVDIAILLQVYLYSAYPQ 238
>sp|A7MB63|CTNS_BOVIN Cystinosin OS=Bos taurus GN=CTNS PE=2 SV=1
Length = 367
Score = 36.2 bits (82), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 40 LGLASVISWGVAEVPQIITNYKEKSTEGLSIAFLTTWILG 79
+G ++W V+ PQ+ITN++ KS GLS F+ ++G
Sbjct: 130 IGWIYFVAWSVSFYPQVITNWRRKSVVGLSFDFVVLNLMG 169
>sp|P17261|ERS1_YEAST Cystine transporter OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=ERS1 PE=1 SV=1
Length = 260
Score = 34.7 bits (78), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 40 LGLASVISWGVAEVPQIITNYKEKSTEGLSIAFL 73
LG+ V SW ++ P IITN++ KS +S+ F+
Sbjct: 8 LGIVYVTSWSISMYPPIITNWRHKSASAISMDFV 41
>sp|Q03193|YD090_YEAST Uncharacterized membrane protein YDR090C OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YDR090C PE=1
SV=1
Length = 310
Score = 34.7 bits (78), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
Query: 46 ISWGVAEVPQIITNYKEKSTEGLSIAFLTTWILGDL-FNVFGCLLE-PATLPTQYYMAML 103
+ W V +PQII N+K+K GL + W++ + F ++ C+ + L Q ++ M
Sbjct: 16 VCWCVQLIPQIIYNWKKKDCTGLPPLMMFLWVVSGIPFAIYFCVSKGNVILQVQPHLFMF 75
Query: 104 YTLTTVILTAQTMYY 118
+ + + Q+ YY
Sbjct: 76 FCSISFV---QSCYY 87
>sp|P57758|CTNS_ARATH Cystinosin homolog OS=Arabidopsis thaliana GN=At5g40670 PE=2 SV=1
Length = 270
Score = 34.7 bits (78), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 19/102 (18%)
Query: 40 LGLASVISWGVAEVPQIITNYKEKSTEGLSIAF----LTTWILGDLFNVFGCLLEPATLP 95
+G + SW ++ PQ+I N++ +S GL+ F LT ++NV CL +
Sbjct: 16 VGWIAFASWSISFYPQLILNFRRRSVVGLNFDFVMLNLTKHSSYMIYNV--CLYFSPVIQ 73
Query: 96 TQYYMA-------------MLYTLTTVILTAQTMYYSHIYPR 124
QY+ + +++ V++TA T++ IY R
Sbjct: 74 KQYFDTYGDKEMIPVAANDVAFSIHAVVMTAVTLFQIFIYER 115
Score = 32.7 bits (73), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 6/97 (6%)
Query: 50 VAEVPQIITNYKEKSTEGLSIAFLTTWILGDLFNVFGCLLEPATLPT--QYYMAM---LY 104
V +PQ N+ KST G SI + G L N +++ + +Y M L
Sbjct: 165 VKYIPQAKMNFTRKSTVGWSIGNILLDFTGGLANYLQMVIQSIDQNSWKNFYGNMGKTLL 224
Query: 105 TLTTVILTAQTMYYSHI-YPRLKHNKRPQTGLMPNQP 140
+L ++ M+ ++ YP K +K P+TG N+P
Sbjct: 225 SLISIFFDILFMFQHYVLYPEKKVSKSPETGEESNEP 261
>sp|P57757|CTNS_MOUSE Cystinosin OS=Mus musculus GN=Ctns PE=1 SV=1
Length = 367
Score = 34.3 bits (77), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
Query: 40 LGLASVISWGVAEVPQIITNYKEKSTEGLSIAF----LTTWILGDLFNVFGCLLEP 91
+G ++W V+ PQ+I N++ KS GLS F LT ++ +FN+ G L P
Sbjct: 130 IGWIYFMAWSVSFYPQVIQNWRRKSVIGLSFDFLALNLTGFVAYSVFNI-GLLWVP 184
>sp|O60931|CTNS_HUMAN Cystinosin OS=Homo sapiens GN=CTNS PE=1 SV=2
Length = 367
Score = 34.3 bits (77), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
Query: 40 LGLASVISWGVAEVPQIITNYKEKSTEGLSIAF----LTTWILGDLFNVFGCLLEP 91
+G ++W ++ PQ+I N++ KS GLS F LT ++ +FN+ G L P
Sbjct: 130 IGWIYFVAWSISFYPQVIMNWRRKSVIGLSFDFVALNLTGFVAYSVFNI-GLLWVP 184
>sp|Q0BRH4|LEUC_GRABC 3-isopropylmalate dehydratase large subunit OS=Granulibacter
bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=leuC
PE=3 SV=1
Length = 471
Score = 33.9 bits (76), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 17/94 (18%)
Query: 263 FNFHYSNTEH----DTVFEKPNKGFVIQVRRKL----------LQVSGGLLQESVTGGSS 308
F S EH T+ +KP K +++VR K+ L + G + GG+
Sbjct: 142 FGIGTSEVEHVLATQTLLQKPAKNMLVEVRGKMPPGTTAKDMILAIIGKI---GTAGGNG 198
Query: 309 GIGSYLGWAMAAIYMGGRLPQICLNIRRGHVEGL 342
+ Y G A+ A+ M GR+ ++I G GL
Sbjct: 199 HVIEYAGEAVRALDMAGRMTICNMSIEAGARAGL 232
>sp|Q96MD7|CI085_HUMAN Uncharacterized protein C9orf85 OS=Homo sapiens GN=C9orf85 PE=1
SV=1
Length = 179
Score = 33.1 bits (74), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 30/63 (47%)
Query: 164 KIDSDTSDTENFSIPIPLPPFPRNGSPGRELYYTSARSLSSSHTPTAGSFIAQRMSPSHH 223
++ + E+ IP LP PR GR L + + R SS +P + S +A HH
Sbjct: 94 EVCAKCGKKEDIVIPWSLPLLPRLECSGRILAHHNLRLPCSSDSPASASRVAGTTGAHHH 153
Query: 224 SRI 226
+++
Sbjct: 154 AQL 156
>sp|Q9M172|PTR42_ARATH Probable nitrate excretion transporter 6 OS=Arabidopsis thaliana
GN=At3g45710 PE=2 SV=2
Length = 560
Score = 32.7 bits (73), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 360 SILVNSVDWSRIRPNLPWLADAGGCVLLDSFILIQFIYYRYRSFQEDKHENS 411
S L N ++ R+ N+ W+ GG + L F++ + +Y+YR+ ++D HE
Sbjct: 505 SWLPNDINHGRV-DNVYWVVVIGGVLNLGYFLVCSW-FYKYRNLKDDDHEQD 554
>sp|P62484|ABI2_MOUSE Abl interactor 2 OS=Mus musculus GN=Abi2 PE=1 SV=1
Length = 446
Score = 32.0 bits (71), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 177 IPIPLP-PFPRNGSPGRELYYTSARSLSSSHTP-TAGSFIAQRMSPSHHSRISIEEPLLG 234
+PI +P P P + PG + + S +S HTP T G + R PS S+ S++ + G
Sbjct: 263 VPIAVPTPSPPSVFPGHPVQFYSMNRPASRHTPPTIGGSLPYRRPPSITSQTSLQNQMNG 322
Query: 235 GHISTQSP 242
G Q+P
Sbjct: 323 GPFYNQNP 330
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 159,264,750
Number of Sequences: 539616
Number of extensions: 6809405
Number of successful extensions: 16630
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 16526
Number of HSP's gapped (non-prelim): 110
length of query: 414
length of database: 191,569,459
effective HSP length: 120
effective length of query: 294
effective length of database: 126,815,539
effective search space: 37283768466
effective search space used: 37283768466
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)