Your job contains 1 sequence.
>015049
MADVVSDYDCAVIDEIQMLGCKTRGFSFTRALLGICANELHLCGDPAAVPLIQQILQVTG
DDVKVQSYERLSPLVPLNVPLGSFSNIQTGDCIVTFSRHAIYRLKKAIESRGKHLCSIVY
GSLPPETRTRQATRFNDASSEFDVLVASDAIGMGLNLNISRIIFSTMKKFDGVELRDLTV
PEVKQIAGRAGRYGSKFPVGEVTCLDSEDLPLLHKSLLEPSPMLESAGLFPNFDLIYMYS
RLHPDSSLYGILEHFLENAKLSENYFFANCEEVLKVATVIDQLPLRLHEKYLFCISPVDM
NDDISSQGLTQFATNYSKKGIVQLREIFTPGTLQVPKTQAALRELESIHKVLDLYVWLSF
RLEESFPDRELAASQKAICSMLIEEFLERLGWQKPRVKKVTPRPKLNSAVVSRC
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 015049
(414 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2130235 - symbol:ATSUV3 species:3702 "Arabidop... 1508 1.2e-154 1
TAIR|locus:2151911 - symbol:AT5G39840 species:3702 "Arabi... 794 5.4e-79 1
UNIPROTKB|Q8IYB8 - symbol:SUPV3L1 "ATP-dependent RNA heli... 766 5.0e-76 1
UNIPROTKB|F1SUG1 - symbol:SUPV3L1 "Uncharacterized protei... 763 1.0e-75 1
MGI|MGI:2441711 - symbol:Supv3l1 "suppressor of var1, 3-l... 763 1.0e-75 1
RGD|1305565 - symbol:Supv3l1 "suppressor of var1, 3-like ... 762 1.3e-75 1
UNIPROTKB|F1PNI9 - symbol:SUPV3L1 "Uncharacterized protei... 750 2.5e-74 1
UNIPROTKB|E1BTJ2 - symbol:SUPV3L1 "ATP-dependent RNA heli... 749 3.1e-74 1
UNIPROTKB|F1NMV4 - symbol:SUPV3L1 "ATP-dependent RNA heli... 749 3.1e-74 1
UNIPROTKB|Q5ZJT0 - symbol:SUPV3L1 "ATP-dependent RNA heli... 749 3.1e-74 1
ZFIN|ZDB-GENE-030131-2838 - symbol:supv3l1 "suppressor of... 724 1.4e-71 1
UNIPROTKB|G4MUT4 - symbol:MGG_01682 "ATP-dependent RNA he... 510 8.6e-68 2
FB|FBgn0037232 - symbol:CG9791 species:7227 "Drosophila m... 680 6.5e-67 1
DICTYBASE|DDB_G0278937 - symbol:DDB_G0278937 "ATP-depende... 669 9.4e-66 1
WB|WBGene00007444 - symbol:C08F8.2 species:6239 "Caenorha... 659 1.1e-64 1
UNIPROTKB|Q17828 - symbol:C08F8.2 "ATP-dependent RNA heli... 659 1.1e-64 1
UNIPROTKB|Q295E6 - symbol:GA22038 "ATP-dependent RNA heli... 653 4.7e-64 1
UNIPROTKB|Q61SU7 - symbol:CBG06022 "ATP-dependent RNA hel... 648 1.6e-63 1
SGD|S000005950 - symbol:SUV3 "ATP-dependent RNA helicase"... 594 8.4e-58 1
POMBASE|SPAC637.11 - symbol:rpm2 "mitochondrial ATP-depen... 583 1.2e-56 1
UNIPROTKB|A6QP28 - symbol:SUPV3L1 "Uncharacterized protei... 576 6.8e-56 1
CGD|CAL0002663 - symbol:SUV3 species:5476 "Candida albica... 515 5.4e-55 2
UNIPROTKB|Q59TB2 - symbol:SUV3 "Putative uncharacterized ... 515 5.4e-55 2
ASPGD|ASPL0000071675 - symbol:AN4723 species:162425 "Emer... 569 6.7e-55 1
GENEDB_PFALCIPARUM|PFF1140c - symbol:PFF1140c "ATP-depend... 267 1.3e-42 4
UNIPROTKB|C6KT73 - symbol:PFF1140c "ATP dependent DEAD-bo... 267 1.3e-42 4
UNIPROTKB|B1AR60 - symbol:SUPV3L1 "ATP-dependent RNA heli... 431 1.6e-40 1
TIGR_CMR|SPO_1417 - symbol:SPO_1417 "helicase, putative" ... 240 7.0e-17 2
UNIPROTKB|F5H6Y7 - symbol:SKIV2L "Helicase SKI2W" species... 127 0.00012 1
FB|FBgn0039117 - symbol:tst "twister" species:7227 "Droso... 120 0.00015 2
ASPGD|ASPL0000004985 - symbol:AN6007 species:162425 "Emer... 128 0.00016 2
CGD|CAL0002171 - symbol:orf19.6425 species:5476 "Candida ... 126 0.00019 2
UNIPROTKB|F5H7B0 - symbol:SKIV2L "Helicase SKI2W" species... 127 0.00020 2
UNIPROTKB|F8VS23 - symbol:SKIV2L "Helicase SKI2W" species... 127 0.00020 2
UNIPROTKB|B4DM01 - symbol:SKIV2L "cDNA FLJ57529, highly s... 127 0.00022 2
UNIPROTKB|F8VNU1 - symbol:SKIV2L "Helicase SKI2W" species... 127 0.00022 2
UNIPROTKB|F1LP39 - symbol:Skiv2l "Protein Skiv2l" species... 127 0.00027 2
RGD|1303059 - symbol:Skiv2l "superkiller viralicidic acti... 127 0.00029 2
UNIPROTKB|E1BMS0 - symbol:LOC100139548 "Uncharacterized p... 127 0.00030 2
UNIPROTKB|E2RSD6 - symbol:SKIV2L "Uncharacterized protein... 127 0.00030 2
UNIPROTKB|Q15477 - symbol:SKIV2L "Helicase SKI2W" species... 127 0.00030 2
UNIPROTKB|F1RQW4 - symbol:SKIV2L "Uncharacterized protein... 127 0.00030 2
DICTYBASE|DDB_G0277211 - symbol:DDB_G0277211 "superkiller... 128 0.00037 2
SGD|S000004390 - symbol:SKI2 "Ski complex component and p... 125 0.00066 2
ASPGD|ASPL0000070749 - symbol:mtr4 species:162425 "Emeric... 121 0.00072 1
>TAIR|locus:2130235 [details] [associations]
symbol:ATSUV3 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISM;IDA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0016070 "RNA metabolic process" evidence=IDA]
[GO:0009561 "megagametogenesis" evidence=IMP] [GO:0009555 "pollen
development" evidence=IMP] InterPro:IPR001650 InterPro:IPR022192
Pfam:PF00271 Pfam:PF12513 PROSITE:PS51194 SMART:SM00490
GO:GO:0005739 GO:GO:0005524 EMBL:CP002687 GO:GO:0009555
GO:GO:0003676 GO:GO:0009561 GO:GO:0016070 GO:GO:0004004
EMBL:AY139995 EMBL:BT008910 EMBL:AJ132843 IPI:IPI00542855
PIR:T52576 RefSeq:NP_193215.2 UniGene:At.509
ProteinModelPortal:Q9SMX1 SMR:Q9SMX1 PRIDE:Q9SMX1
EnsemblPlants:AT4G14790.1 GeneID:827134 KEGG:ath:AT4G14790
TAIR:At4g14790 InParanoid:Q9SMX1 OMA:ASQKSIC PhylomeDB:Q9SMX1
ProtClustDB:CLSN2687511 Genevestigator:Q9SMX1 Uniprot:Q9SMX1
Length = 571
Score = 1508 (535.9 bits), Expect = 1.2e-154, P = 1.2e-154
Identities = 284/388 (73%), Positives = 332/388 (85%)
Query: 1 MADVVSDYDCAVIDEIQMLGCKTRGFSFTRALLGICANELHLCGDPAAVPLIQQILQVTG 60
MADV S YDCA+IDEIQM+GCK RGF+FTRALLGI A+ELHLCGDPA VPL++ IL+VTG
Sbjct: 163 MADVTSVYDCAIIDEIQMVGCKQRGFAFTRALLGIAADELHLCGDPAVVPLVEDILKVTG 222
Query: 61 DDVKVQSYERLSPLVPLNVPLGSFSNIQTGDCIVTFSRHAIYRLKKAIESRGKHLCSIVY 120
DDV+V +YERLSPLVPL VP+ S S+I+TGDC+VTFSR IY KK IE GKHLCS+VY
Sbjct: 223 DDVEVHTYERLSPLVPLKVPVSSVSSIKTGDCLVTFSRKDIYAYKKTIERAGKHLCSVVY 282
Query: 121 GSLPPETRTRQATRFNDASSEFDVLVASDAIGMGLNLNISRIIFSTMKKFDGVELRDLTV 180
GSLPPETRT QATRFND +++FDVLVASDAIGMGLNLNISRIIFST++K+DG E RDLTV
Sbjct: 283 GSLPPETRTAQATRFNDETNDFDVLVASDAIGMGLNLNISRIIFSTLQKYDGSETRDLTV 342
Query: 181 PEVKQIAGRAGRYGSKFPVGEVTCLDSEDLPLLHKSLLEPSPMLESAGLFPNFDLIYMYS 240
E+KQIAGRAGR+ SKFP+GEVTCL EDLPLLH SL PSP+LE AGLFP FDL+ YS
Sbjct: 343 SEIKQIAGRAGRFQSKFPIGEVTCLHKEDLPLLHSSLKSPSPILERAGLFPTFDLLSGYS 402
Query: 241 RLHPDSSLYGILEHFLENAKLSENYFFANCEEVLKVATVIDQLPLRLHEKYLFCISPVDM 300
+ HP LY ILEHF+ENAKLS NYF +N E+++KVA ++D+LPL L EKYLF +SPVD+
Sbjct: 403 QAHPTHGLYQILEHFVENAKLSSNYFISNVEDMMKVAAIVDELPLGLQEKYLFVVSPVDV 462
Query: 301 NDDISSQGLTQFATNYSKKGIVQLREIFTPGTLQVPKTQAALRELESIHKVLDLYVWLSF 360
ND+IS QGL QFA N+SK GIV+LREI P ++VPKT L+ELESIHKVLDLYVWLS
Sbjct: 463 NDEISGQGLAQFAQNFSKAGIVRLREILAPDRVKVPKTPTELKELESIHKVLDLYVWLSL 522
Query: 361 RLEESFPDRELAASQKAICSMLIEEFLE 388
RLE+SFPDRE+AASQK+IC++LIE+FLE
Sbjct: 523 RLEDSFPDREVAASQKSICNLLIEQFLE 550
>TAIR|locus:2151911 [details] [associations]
symbol:AT5G39840 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISM;ISS]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] InterPro:IPR001650 InterPro:IPR022192
Pfam:PF00271 Pfam:PF12513 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 EMBL:CP002688 GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 IPI:IPI00521078
RefSeq:NP_198800.1 UniGene:At.55263 ProteinModelPortal:F4KFV7
SMR:F4KFV7 PRIDE:F4KFV7 EnsemblPlants:AT5G39840.1 GeneID:833980
KEGG:ath:AT5G39840 OMA:KVANMLE ArrayExpress:F4KFV7 Uniprot:F4KFV7
Length = 776
Score = 794 (284.6 bits), Expect = 5.4e-79, P = 5.4e-79
Identities = 158/388 (40%), Positives = 250/388 (64%)
Query: 8 YDCAVIDEIQMLGCKTRGFSFTRALLGICANELHLCGDPAAVPLIQQILQVTGDDVKVQS 67
Y+ AV+DEIQM+ +RG ++T+ALLG+ A+E+HLCGDP+ + +++++ TGD++ +
Sbjct: 355 YEVAVLDEIQMMADPSRGHAWTKALLGLKADEIHLCGDPSVLDIVRKMCADTGDELVEEH 414
Query: 68 YERLSPLV-PLNVPLGSFSNIQTGDCIVTFSRHAIYRLKKAIESRGKHLCSIVYGSLPPE 126
YER PLV LG N+++GDC+V FSR I+ +K AIE H C ++YG+LPPE
Sbjct: 415 YERFKPLVVEAKTLLGELKNVKSGDCVVAFSRREIFEVKMAIEKHTNHRCCVIYGALPPE 474
Query: 127 TRTRQATRFNDASSEFDVLVASDAIGMGLNLNISRIIFSTMKKFDGVELRDLTVPEVKQI 186
TR +QA FND +E+DVLVASDA+GMGLNLNI R++F ++ K++G ++ + +VKQI
Sbjct: 475 TRRQQAKLFNDQENEYDVLVASDAVGMGLNLNIRRVVFYSLNKYNGDKIVPVAASQVKQI 534
Query: 187 AGRAGRYGSKFPVGEVTCLDSEDLPLLHKSLLEPSPMLESAGLFPNFDLIYMYSRLHPDS 246
AGRAGR GS++P G T L EDL L + L +P + GLFP F+ I +++ PD
Sbjct: 535 AGRAGRRGSRYPDGLTTTLHLEDLNYLIECLQQPFDEVTKVGLFPFFEQIELFAAQVPDM 594
Query: 247 SLYGILEHFLENAKLSENYFFANCEEVLKVATVIDQLP-LRLHEKYLFCISPVDMNDDIS 305
+ +LEHF ++ +L +YF + V KVA +++++ L L +++ FC +PV++ + +
Sbjct: 595 AFSNLLEHFGKHCRLDGSYFLCRHDHVKKVANMLEKVEGLSLEDRFNFCFAPVNIRNPRA 654
Query: 306 SQGLTQFATNYSKKGIVQLREIFTPGTLQVPKTQAALRELESIHKVLDLYVWLSFRLEES 365
L +FA++YS+ V + + P + K+ A L +LES H++L +Y+WLS + EE+
Sbjct: 655 MHNLYRFASSYSQNMPVNVA-MGIPKSSA--KSDAQLLDLESRHQILSMYLWLSNQFEEN 711
Query: 366 FPDRELAASQKAICSMLIEEFLERLGWQ 393
FP E + + L+ E L + W+
Sbjct: 712 FPFVEKVEAMATNIAELLGESLSKASWK 739
>UNIPROTKB|Q8IYB8 [details] [associations]
symbol:SUPV3L1 "ATP-dependent RNA helicase SUPV3L1,
mitochondrial" species:9606 "Homo sapiens" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0045025 "mitochondrial degradosome"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006310 "DNA recombination" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0070827
"chromatin maintenance" evidence=IMP] [GO:0043066 "negative
regulation of apoptotic process" evidence=IMP] [GO:0006401 "RNA
catabolic process" evidence=IMP] [GO:0005759 "mitochondrial matrix"
evidence=IDA] [GO:0032508 "DNA duplex unwinding" evidence=IMP]
[GO:0003678 "DNA helicase activity" evidence=IMP] [GO:0003677 "DNA
binding" evidence=IMP] [GO:2000827 "mitochondrial RNA surveillance"
evidence=IMP] [GO:0035946 "mitochondrial mRNA surveillance"
evidence=IMP] [GO:0035945 "mitochondrial ncRNA surveillance"
evidence=IMP] [GO:0042803 "protein homodimerization activity"
evidence=IPI] [GO:0003725 "double-stranded RNA binding"
evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0034458 "3'-5' RNA helicase activity"
evidence=IDA] [GO:0000962 "positive regulation of mitochondrial RNA
catabolic process" evidence=IMP;IDA] [GO:0000965 "mitochondrial RNA
3'-end processing" evidence=IMP] [GO:0030307 "positive regulation
of cell growth" evidence=IMP] [GO:0070584 "mitochondrion
morphogenesis" evidence=IMP] [GO:0000958 "mitochondrial mRNA
catabolic process" evidence=IMP] [GO:0003723 "RNA binding"
evidence=TAS] [GO:0004386 "helicase activity" evidence=TAS]
[GO:0042645 "mitochondrial nucleoid" evidence=IDA]
InterPro:IPR001650 InterPro:IPR022192 Pfam:PF00271 Pfam:PF12513
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0043066 GO:GO:0030307 GO:GO:0003677 EMBL:CH471083
GO:GO:0042645 GO:GO:0006310 GO:GO:0003725 PROSITE:PS51192
GO:GO:0003678 GO:GO:0004004 GO:GO:0070584 GO:GO:0000958
eggNOG:COG0513 GO:GO:0045025 EMBL:AL596223 GO:GO:0000965
GO:GO:0000962 GO:GO:0070827 HOGENOM:HOG000175283 OMA:ADMIQHI
CTD:6832 HOVERGEN:HBG108522 OrthoDB:EOG4SXNBZ GO:GO:0034458
GO:GO:0035946 GO:GO:0035945 EMBL:AF042169 EMBL:AK290416
EMBL:BC036112 IPI:IPI00412404 RefSeq:NP_003162.2 UniGene:Hs.106469
PDB:3RC3 PDB:3RC8 PDBsum:3RC3 PDBsum:3RC8 ProteinModelPortal:Q8IYB8
SMR:Q8IYB8 IntAct:Q8IYB8 STRING:Q8IYB8 PhosphoSite:Q8IYB8
DMDM:74759699 PaxDb:Q8IYB8 PeptideAtlas:Q8IYB8 PRIDE:Q8IYB8
DNASU:6832 Ensembl:ENST00000359655 GeneID:6832 KEGG:hsa:6832
UCSC:uc001jpe.1 GeneCards:GC10P070939 HGNC:HGNC:11471 HPA:HPA038405
MIM:605122 neXtProt:NX_Q8IYB8 PharmGKB:PA36257 InParanoid:Q8IYB8
ChEMBL:CHEMBL3642 GenomeRNAi:6832 NextBio:26671 ArrayExpress:Q8IYB8
Bgee:Q8IYB8 CleanEx:HS_SUPV3L1 Genevestigator:Q8IYB8 Uniprot:Q8IYB8
Length = 786
Score = 766 (274.7 bits), Expect = 5.0e-76, P = 5.0e-76
Identities = 160/379 (42%), Positives = 238/379 (62%)
Query: 1 MADVVSDYDCAVIDEIQMLGCKTRGFSFTRALLGICANELHLCGDPAAVPLIQQILQVTG 60
M V + Y+ AVIDEIQM+ RG+++TRALLG+CA E+HLCG+PAA+ L+ +++ TG
Sbjct: 278 MCSVTTPYEVAVIDEIQMIRDPARGWAWTRALLGLCAEEVHLCGEPAAIDLVMELMYTTG 337
Query: 61 DDVKVQSYERLSPLVPLNVPLGSFSNIQTGDCIVTFSRHAIYRLKKAIESRGKHLCSIVY 120
++V+V+ Y+RL+P+ L+ L S N++ GDCIV FS++ IY + + IE RG +++Y
Sbjct: 338 EEVEVRDYKRLTPISVLDHALESLDNLRPGDCIVCFSKNDIYSVSRQIEIRGLE-SAVIY 396
Query: 121 GSLPPETRTRQATRFNDASSEFDVLVASDAIGMGLNLNISRIIFSTMKKFD----GV-EL 175
GSLPP T+ QA +FND + +LVA+DAIGMGLNL+I RIIF ++ K G EL
Sbjct: 397 GSLPPGTKLAQAKKFNDPNDPCKILVATDAIGMGLNLSIRRIIFYSLIKPSINEKGEREL 456
Query: 176 RDLTVPEVKQIAGRAGRYGSKFPVGEVTCLDSEDLPLLHKSLLEPSPMLESAGLFPNFDL 235
+T + QIAGRAGR+ S+F GEVT ++ EDL LL + L P + +AGL P +
Sbjct: 457 EPITTSQALQIAGRAGRFSSRFKEGEVTTMNHEDLSLLKEILKRPVDPIRAAGLHPTAEQ 516
Query: 236 IYMYSRLHPDSSLYGILEHFLENAKLSENYFFANCEEVLKVATVIDQLPLRLHEKYLFCI 295
I M++ PD++L +++ F++ +++ YF N ++ A +I +PL L +Y+FC
Sbjct: 517 IEMFAYHLPDATLSNLIDIFVDFSQVDGQYFVCNMDDFKFSAELIQHIPLSLRVRYVFCT 576
Query: 296 SPVDMNDDISSQGLTQFATNYSKKG---IVQLREIFTPGTLQVPKTQAALRELESIHKVL 352
+P++ L QFA YS+ LR + L PK L +LE++H VL
Sbjct: 577 APINKKQPFVCSSLLQFARQYSRNEPLTFAWLRR-YIKWPLLPPKNIKDLMDLEAVHDVL 635
Query: 353 DLYVWLSFRLEESFPDREL 371
DLY+WLS+R + FPD L
Sbjct: 636 DLYLWLSYRFMDMFPDASL 654
>UNIPROTKB|F1SUG1 [details] [associations]
symbol:SUPV3L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070827 "chromatin maintenance" evidence=IEA]
[GO:0070584 "mitochondrion morphogenesis" evidence=IEA] [GO:0045025
"mitochondrial degradosome" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0042645 "mitochondrial
nucleoid" evidence=IEA] [GO:0035946 "mitochondrial mRNA
surveillance" evidence=IEA] [GO:0035945 "mitochondrial ncRNA
surveillance" evidence=IEA] [GO:0034458 "3'-5' RNA helicase
activity" evidence=IEA] [GO:0030307 "positive regulation of cell
growth" evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0003678 "DNA helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0000965
"mitochondrial RNA 3'-end processing" evidence=IEA] [GO:0000962
"positive regulation of mitochondrial RNA catabolic process"
evidence=IEA] [GO:0000958 "mitochondrial mRNA catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR022192 Pfam:PF00271 Pfam:PF12513
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0030307 GO:GO:0003677 GO:GO:0042645 GO:GO:0006310
GO:GO:0003725 GO:GO:0003678 GO:GO:0004004 GO:GO:0070584
GO:GO:0000958 GO:GO:0045025 GO:GO:0000965 GO:GO:0000962
GO:GO:0070827 GeneTree:ENSGT00390000003100 OMA:ADMIQHI CTD:6832
GO:GO:0034458 GO:GO:0035946 GO:GO:0035945 EMBL:CT737222
RefSeq:XP_001928933.1 UniGene:Ssc.16551 Ensembl:ENSSSCT00000011221
GeneID:100155960 KEGG:ssc:100155960 Uniprot:F1SUG1
Length = 789
Score = 763 (273.6 bits), Expect = 1.0e-75, P = 1.0e-75
Identities = 162/386 (41%), Positives = 240/386 (62%)
Query: 1 MADVVSDYDCAVIDEIQMLGCKTRGFSFTRALLGICANELHLCGDPAAVPLIQQILQVTG 60
M V + Y+ AVIDEIQM+ RG+++TRALLG+CA E+HLCG+ AA+ L+ +++ TG
Sbjct: 281 MCSVTTPYEVAVIDEIQMIKDPARGWAWTRALLGLCAKEIHLCGESAAIDLVTELMYTTG 340
Query: 61 DDVKVQSYERLSPLVPLNVPLGSFSNIQTGDCIVTFSRHAIYRLKKAIESRGKHLCSIVY 120
+DV+V++Y+RL+P+ L+ L S N++ GDCIV FS++ IY + + IE RG +++Y
Sbjct: 341 EDVEVRTYKRLTPISVLDHALESLDNLRPGDCIVCFSKNDIYSVSRQIEIRGLE-SAVIY 399
Query: 121 GSLPPETRTRQATRFNDASSEFDVLVASDAIGMGLNLNISRIIF-STMKKF---DGV-EL 175
GSLPP T+ QA +FND +LVA+DAIGMGLNL+I RIIF S MK G E+
Sbjct: 400 GSLPPGTKLAQAKKFNDPDDPCKILVATDAIGMGLNLSIRRIIFYSLMKPSINEKGEREI 459
Query: 176 RDLTVPEVKQIAGRAGRYGSKFPVGEVTCLDSEDLPLLHKSLLEPSPMLESAGLFPNFDL 235
+T + QIAGRAGR+ SKF GEVT + EDL LL + L P +++AGL P +
Sbjct: 460 EPITTSQALQIAGRAGRFSSKFKEGEVTTMHREDLNLLKEILSRPVDPIKAAGLHPTAEQ 519
Query: 236 IYMYSRLHPDSSLYGILEHFLENAKLSENYFFANCEEVLKVATVIDQLPLRLHEKYLFCI 295
I M++ PD++L +++ F++ +++ YF N ++ A +I +PL L +Y+FC
Sbjct: 520 IEMFAYHLPDTTLSNLIDIFVDFSQVDGQYFVCNMDDFKFSAELIQHIPLSLRVRYVFCT 579
Query: 296 SPVDMNDDISSQGLTQFATNYSKKGIVQLREI--FTPGTLQVPKTQAALRELESIHKVLD 353
+P++ L QFA YS+ + + + L PK L +LE++H VLD
Sbjct: 580 APINKKQPFVCSSLLQFARQYSRNEPLTFSWLRRYIKWPLLPPKNIKDLMDLEAVHDVLD 639
Query: 354 LYVWLSFRLEESFPDRELAAS-QKAI 378
LY+WLS+R + FPD L QK +
Sbjct: 640 LYLWLSYRFIDMFPDASLVRDLQKQL 665
>MGI|MGI:2441711 [details] [associations]
symbol:Supv3l1 "suppressor of var1, 3-like 1 (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000958 "mitochondrial mRNA catabolic
process" evidence=ISO] [GO:0000962 "positive regulation of
mitochondrial RNA catabolic process" evidence=ISO] [GO:0000965
"mitochondrial RNA 3'-end processing" evidence=ISO] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=ISO] [GO:0003678 "DNA helicase activity" evidence=ISO]
[GO:0003725 "double-stranded RNA binding" evidence=ISO] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISO] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005739
"mitochondrion" evidence=ISO;IDA] [GO:0005759 "mitochondrial
matrix" evidence=ISO] [GO:0006310 "DNA recombination" evidence=ISO]
[GO:0006401 "RNA catabolic process" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016817 "hydrolase activity,
acting on acid anhydrides" evidence=IEA] [GO:0030307 "positive
regulation of cell growth" evidence=ISO] [GO:0032508 "DNA duplex
unwinding" evidence=ISO] [GO:0034458 "3'-5' RNA helicase activity"
evidence=ISO] [GO:0035945 "mitochondrial ncRNA surveillance"
evidence=ISO] [GO:0035946 "mitochondrial mRNA surveillance"
evidence=ISO] [GO:0042645 "mitochondrial nucleoid" evidence=ISO]
[GO:0042803 "protein homodimerization activity" evidence=ISO]
[GO:0043066 "negative regulation of apoptotic process"
evidence=ISO] [GO:0045025 "mitochondrial degradosome" evidence=ISO]
[GO:0070584 "mitochondrion morphogenesis" evidence=ISO] [GO:0070827
"chromatin maintenance" evidence=ISO] [GO:2000827 "mitochondrial
RNA surveillance" evidence=ISO] InterPro:IPR001650
InterPro:IPR022192 Pfam:PF00271 Pfam:PF12513 PROSITE:PS51194
SMART:SM00490 MGI:MGI:2441711 GO:GO:0005524 GO:GO:0005634
GO:GO:0043066 GO:GO:0030307 GO:GO:0005759 GO:GO:0003677
GO:GO:0042645 GO:GO:0006310 GO:GO:0003725 PROSITE:PS51192
GO:GO:0003678 GO:GO:0004004 GO:GO:0070584 GO:GO:0000958
eggNOG:COG0513 GO:GO:0045025 GO:GO:0000965 GO:GO:0000962
GO:GO:0070827 HOGENOM:HOG000175283 GeneTree:ENSGT00390000003100
OMA:ADMIQHI CTD:6832 HOVERGEN:HBG108522 OrthoDB:EOG4SXNBZ
GO:GO:0034458 GO:GO:0035946 GO:GO:0035945 EMBL:AJ968954
EMBL:BC049796 IPI:IPI00314919 RefSeq:NP_852088.1 UniGene:Mm.235898
ProteinModelPortal:Q80YD1 SMR:Q80YD1 STRING:Q80YD1
PhosphoSite:Q80YD1 PaxDb:Q80YD1 PRIDE:Q80YD1
Ensembl:ENSMUST00000020273 GeneID:338359 KEGG:mmu:338359
UCSC:uc007fhd.1 InParanoid:Q80YD1 NextBio:400135 Bgee:Q80YD1
CleanEx:MM_SUPV3L1 Genevestigator:Q80YD1 Uniprot:Q80YD1
Length = 779
Score = 763 (273.6 bits), Expect = 1.0e-75, P = 1.0e-75
Identities = 163/393 (41%), Positives = 241/393 (61%)
Query: 1 MADVVSDYDCAVIDEIQMLGCKTRGFSFTRALLGICANELHLCGDPAAVPLIQQILQVTG 60
M +V + Y+ AVIDEIQM+ RG+++TRALLG+CA E+HLCG+ AA+ L+ ++L TG
Sbjct: 278 MCNVATPYEVAVIDEIQMIRDPARGWAWTRALLGLCAEEVHLCGESAAINLVSELLYTTG 337
Query: 61 DDVKVQSYERLSPLVPLNVPLGSFSNIQTGDCIVTFSRHAIYRLKKAIESRGKHLCSIVY 120
++V+VQ YERL+P+ L+ L S N+Q GDCIV FS++ IY + + IE RG +++Y
Sbjct: 338 EEVEVQKYERLTPISVLDHALESLDNLQPGDCIVCFSKNDIYSVSRQIEIRGLE-SAVIY 396
Query: 121 GSLPPETRTRQATRFNDASSEFDVLVASDAIGMGLNLNISRIIFSTMKKFD----GV-EL 175
GSLPP T+ QA +FND + +LVA+DAIGMGLNL+I RIIF ++ K G EL
Sbjct: 397 GSLPPGTKLAQARKFNDPNDPCKILVATDAIGMGLNLSIRRIIFYSLIKPSINEKGEKEL 456
Query: 176 RDLTVPEVKQIAGRAGRYGSKFPVGEVTCLDSEDLPLLHKSLLEPSPMLESAGLFPNFDL 235
+T + QIAGRAGR+ S F G+VT + +DL LL L P +++AGL P +
Sbjct: 457 EPITTSQALQIAGRAGRFSSHFKEGQVTTMHRDDLALLKDILNRPVDPIQAAGLHPTAEQ 516
Query: 236 IYMYSRLHPDSSLYGILEHFLENAKLSENYFFANCEEVLKVATVIDQLPLRLHEKYLFCI 295
I M++ P+++L +++ F++ A++ YF N ++ A +I +PL L +Y+FC
Sbjct: 517 IEMFAYHLPETTLSNLIDIFVDFAQVDGQYFVCNMDDFKFSAELIQHIPLSLRVRYVFCT 576
Query: 296 SPVDMNDDISSQGLTQFATNYSKKG---IVQLREIFTPGTLQVPKTQAALRELESIHKVL 352
+P++ L QFA YS+ LR + L PK L +LE++H V
Sbjct: 577 APINKKQPFVCSSLLQFARQYSRNEPLTFAWLRR-YIKWPLLPPKNIKDLMDLEAVHDVF 635
Query: 353 DLYVWLSFRLEESFPDRELAASQKAICSMLIEE 385
DLY+WLS+R + FPD L S + +I+E
Sbjct: 636 DLYLWLSYRFIDMFPDSSLVRSLQKELDAIIQE 668
>RGD|1305565 [details] [associations]
symbol:Supv3l1 "suppressor of var1, 3-like 1 (S. cerevisiae)"
species:10116 "Rattus norvegicus" [GO:0000958 "mitochondrial mRNA
catabolic process" evidence=IEA;ISO;ISS] [GO:0000962 "positive
regulation of mitochondrial RNA catabolic process"
evidence=IEA;ISO;ISS] [GO:0000965 "mitochondrial RNA 3'-end
processing" evidence=IEA;ISO;ISS] [GO:0003677 "DNA binding"
evidence=IEA;ISO;ISS] [GO:0003678 "DNA helicase activity"
evidence=IEA;ISO;ISS] [GO:0003725 "double-stranded RNA binding"
evidence=IEA;ISO;ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA;ISO;ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO;ISS]
[GO:0005739 "mitochondrion" evidence=ISO;ISS] [GO:0005759
"mitochondrial matrix" evidence=ISO;ISS] [GO:0006310 "DNA
recombination" evidence=IEA;ISO;ISS] [GO:0006401 "RNA catabolic
process" evidence=ISO;ISS] [GO:0030307 "positive regulation of cell
growth" evidence=IEA;ISO;ISS] [GO:0032508 "DNA duplex unwinding"
evidence=ISO;ISS] [GO:0034458 "3'-5' RNA helicase activity"
evidence=IEA;ISO;ISS] [GO:0035945 "mitochondrial ncRNA
surveillance" evidence=IEA;ISO;ISS] [GO:0035946 "mitochondrial mRNA
surveillance" evidence=IEA;ISO;ISS] [GO:0042645 "mitochondrial
nucleoid" evidence=IEA;ISO] [GO:0042803 "protein homodimerization
activity" evidence=IEA;ISO] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA;ISO;ISS] [GO:0045025 "mitochondrial
degradosome" evidence=IEA;ISO;ISS] [GO:0070584 "mitochondrion
morphogenesis" evidence=IEA;ISO;ISS] [GO:0070827 "chromatin
maintenance" evidence=IEA;ISO;ISS] [GO:2000827 "mitochondrial RNA
surveillance" evidence=ISO;ISS] InterPro:IPR001650
InterPro:IPR022192 Pfam:PF00271 Pfam:PF12513 PROSITE:PS51194
SMART:SM00490 RGD:1305565 GO:GO:0005524 GO:GO:0005634 GO:GO:0043066
GO:GO:0030307 GO:GO:0005759 GO:GO:0003677 GO:GO:0042645
GO:GO:0006310 GO:GO:0003725 PROSITE:PS51192 GO:GO:0003678
GO:GO:0004004 GO:GO:0070584 GO:GO:0000958 eggNOG:COG0513
GO:GO:0045025 GO:GO:0000965 GO:GO:0000962 GO:GO:0070827
HOGENOM:HOG000175283 CTD:6832 HOVERGEN:HBG108522 OrthoDB:EOG4SXNBZ
GO:GO:0034458 GO:GO:0035946 GO:GO:0035945 EMBL:BC089883
IPI:IPI00554250 RefSeq:NP_001012480.1 UniGene:Rn.19830
ProteinModelPortal:Q5EBA1 STRING:Q5EBA1 PRIDE:Q5EBA1 GeneID:294385
KEGG:rno:294385 UCSC:RGD:1305565 InParanoid:Q5EBA1 NextBio:638092
ArrayExpress:Q5EBA1 Genevestigator:Q5EBA1 Uniprot:Q5EBA1
Length = 776
Score = 762 (273.3 bits), Expect = 1.3e-75, P = 1.3e-75
Identities = 162/393 (41%), Positives = 242/393 (61%)
Query: 1 MADVVSDYDCAVIDEIQMLGCKTRGFSFTRALLGICANELHLCGDPAAVPLIQQILQVTG 60
M +V + Y+ AVIDEIQM+ RG+++TRALLG+CA E+HLCG+ AA+ L+ ++L TG
Sbjct: 278 MCNVATPYEVAVIDEIQMIRDPARGWAWTRALLGLCAEEVHLCGESAAIDLVTELLYTTG 337
Query: 61 DDVKVQSYERLSPLVPLNVPLGSFSNIQTGDCIVTFSRHAIYRLKKAIESRGKHLCSIVY 120
++V+VQ YERL+P+ L+ L S N++ GDCIV FS++ IY + + IE RG +++Y
Sbjct: 338 EEVEVQKYERLTPISVLDRALESLDNLRPGDCIVCFSKNDIYSVSRQIEIRGLE-SAVIY 396
Query: 121 GSLPPETRTRQATRFNDASSEFDVLVASDAIGMGLNLNISRIIFSTMKKFD----GV-EL 175
GSLPP T+ QA +FND + +LVA+DAIGMGLNL+I RIIF ++ K G EL
Sbjct: 397 GSLPPGTKLAQARKFNDPNDPCKILVATDAIGMGLNLSIRRIIFYSLIKPSINEKGEKEL 456
Query: 176 RDLTVPEVKQIAGRAGRYGSKFPVGEVTCLDSEDLPLLHKSLLEPSPMLESAGLFPNFDL 235
+T + QIAGRAGR+ S F GEVT + +DL LL + L P +++AGL P +
Sbjct: 457 EPITTSQALQIAGRAGRFSSHFKEGEVTTMHRDDLALLKEILNRPVDPIQAAGLHPTAEQ 516
Query: 236 IYMYSRLHPDSSLYGILEHFLENAKLSENYFFANCEEVLKVATVIDQLPLRLHEKYLFCI 295
I M++ P+++L +++ F++ A++ YF N ++ A +I +PL L +Y+FC
Sbjct: 517 IEMFAYHLPETTLSNLIDIFVDFAQVDGQYFVCNMDDFKFSAELIQHIPLSLRVRYVFCT 576
Query: 296 SPVDMNDDISSQGLTQFATNYSKKG---IVQLREIFTPGTLQVPKTQAALRELESIHKVL 352
+P++ L QFA YS+ LR + L PK L +LE++H V
Sbjct: 577 APINKKQPFVCSSLLQFARQYSRNEPLTFAWLRR-YIKWPLLPPKNIKDLMDLEAVHDVF 635
Query: 353 DLYVWLSFRLEESFPDRELAASQKAICSMLIEE 385
DLY+WLS+R + FPD S + ++I+E
Sbjct: 636 DLYLWLSYRFIDMFPDSSFVRSLQKELDVIIQE 668
>UNIPROTKB|F1PNI9 [details] [associations]
symbol:SUPV3L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR022192
Pfam:PF00271 Pfam:PF12513 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
GeneTree:ENSGT00390000003100 OMA:ADMIQHI EMBL:AAEX03002786
Ensembl:ENSCAFT00000021963 Uniprot:F1PNI9
Length = 845
Score = 750 (269.1 bits), Expect = 2.5e-74, P = 2.5e-74
Identities = 156/392 (39%), Positives = 242/392 (61%)
Query: 1 MADVVSDYDCAVIDEIQMLGCKTRGFSFTRALLGICANELHLCGDPAAVPLIQQILQVTG 60
M V + Y+ AVIDEIQM+ RG+++TRALLG+CA E+HLCG+ AA+ L+ +++ TG
Sbjct: 337 MCSVTTPYEVAVIDEIQMIKDPARGWAWTRALLGLCAEEVHLCGESAAIDLVTELMYTTG 396
Query: 61 DDVKVQSYERLSPLVPLNVPLGSFSNIQTGDCIVTFSRHAIYRLKKAIESRGKHLCSIVY 120
++V+V++Y+RL+P+ L+ L S N++ GDCIV F+++ IY + + IE RG +++Y
Sbjct: 397 EEVEVRNYKRLTPISVLDHALESLDNLRPGDCIVCFNKNDIYSVSRQIEIRGLE-SAVIY 455
Query: 121 GSLPPETRTRQATRFNDASSEFDVLVASDAIGMGLNLNISRIIF-----STMKKFDGVEL 175
GSLPP T+ QA +FND +LVA+DAIGMGLNL+I RIIF T+ + E+
Sbjct: 456 GSLPPGTKLAQAKKFNDPDDPCKILVATDAIGMGLNLSIRRIIFYSLIKPTINEKGEKEI 515
Query: 176 RDLTVPEVKQIAGRAGRYGSKFPVGEVTCLDSEDLPLLHKSLLEPSPMLESAGLFPNFDL 235
+T + QIAGRAGR+ SK+ GEVT ++ EDL LL + L P +++AGL P +
Sbjct: 516 EPITTSQALQIAGRAGRFSSKYKEGEVTTMNREDLSLLKEILKRPVNPIKAAGLHPTAEQ 575
Query: 236 IYMYSRLHPDSSLYGILEHFLENAKLSENYFFANCEEVLKVATVIDQLPLRLHEKYLFCI 295
I M++ PD++L +++ F++ +++ YF N ++ A +I +PL L +Y+FC
Sbjct: 576 IEMFAYHLPDTTLSNLIDIFVDFSQVDGQYFVCNMDDFKFSAELIQHIPLSLRVRYVFCT 635
Query: 296 SPVDMNDDISSQGLTQFATNYSKKGIVQLREI--FTPGTLQVPKTQAALRELESIHKVLD 353
+P++ L QFA YS+ + + + L PK L +LE++H VLD
Sbjct: 636 APINKKQPFVCSSLLQFARQYSRNEPLTFSWLRRYIKWPLLPPKNIKDLMDLEAVHDVLD 695
Query: 354 LYVWLSFRLEESFPDRELAAS-QKAICSMLIE 384
LY+WLS+R + FPD QK + ++ E
Sbjct: 696 LYLWLSYRFIDMFPDANFIRDLQKELDGIIQE 727
>UNIPROTKB|E1BTJ2 [details] [associations]
symbol:SUPV3L1 "ATP-dependent RNA helicase SUPV3L1,
mitochondrial" species:9031 "Gallus gallus" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000958 "mitochondrial mRNA catabolic
process" evidence=IEA] [GO:0000962 "positive regulation of
mitochondrial RNA catabolic process" evidence=IEA] [GO:0000965
"mitochondrial RNA 3'-end processing" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0003678 "DNA helicase activity"
evidence=IEA] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0030307 "positive regulation of
cell growth" evidence=IEA] [GO:0034458 "3'-5' RNA helicase
activity" evidence=IEA] [GO:0035945 "mitochondrial ncRNA
surveillance" evidence=IEA] [GO:0035946 "mitochondrial mRNA
surveillance" evidence=IEA] [GO:0042645 "mitochondrial nucleoid"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA] [GO:0045025 "mitochondrial degradosome"
evidence=IEA] [GO:0070584 "mitochondrion morphogenesis"
evidence=IEA] [GO:0070827 "chromatin maintenance" evidence=IEA]
InterPro:IPR001650 InterPro:IPR022192 Pfam:PF00271 Pfam:PF12513
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0030307 GO:GO:0003677 GO:GO:0042645 GO:GO:0006310
GO:GO:0003725 GO:GO:0003678 GO:GO:0004004 GO:GO:0000958
GO:GO:0045025 GO:GO:0000965 GO:GO:0000962 GO:GO:0070827
GeneTree:ENSGT00390000003100 OMA:ADMIQHI GO:GO:0034458
GO:GO:0035946 GO:GO:0035945 EMBL:AADN02028004 EMBL:AADN02028006
EMBL:AADN02027997 EMBL:AADN02027998 EMBL:AADN02027999
EMBL:AADN02028000 EMBL:AADN02028001 EMBL:AADN02028002
EMBL:AADN02028003 EMBL:AADN02028005 IPI:IPI00576512
Ensembl:ENSGALT00000006679 ArrayExpress:E1BTJ2 Uniprot:E1BTJ2
Length = 796
Score = 749 (268.7 bits), Expect = 3.1e-74, P = 3.1e-74
Identities = 156/386 (40%), Positives = 240/386 (62%)
Query: 1 MADVVSDYDCAVIDEIQMLGCKTRGFSFTRALLGICANELHLCGDPAAVPLIQQILQVTG 60
M + Y+ AVIDEIQM+ RG+++TRALLG+CA E+H+CG+ AA+ L+ +++ TG
Sbjct: 268 MCSTNTPYEVAVIDEIQMIRDPARGWAWTRALLGLCAEEIHVCGEGAAIDLVTELMYTTG 327
Query: 61 DDVKVQSYERLSPLVPLNVPLGSFSNIQTGDCIVTFSRHAIYRLKKAIESRGKHLCSIVY 120
++V+V++Y+RL+PL L+ L S N+Q GDCIV FS++ IY + + IE+RG C+++Y
Sbjct: 328 EEVEVRNYKRLTPLTVLDYALESLDNLQPGDCIVCFSKNDIYSVSRQIEARGLE-CAVIY 386
Query: 121 GSLPPETRTRQATRFNDASSEFDVLVASDAIGMGLNLNISRIIFS-----TMKKFDGVEL 175
GSLPP T+ QA +FND + +LVA+DAIGMGLNL I RIIF+ T+ + E+
Sbjct: 387 GSLPPGTKLEQAKKFNDPNDPCKILVATDAIGMGLNLCIKRIIFNSIVKPTVNEKGEKEI 446
Query: 176 RDLTVPEVKQIAGRAGRYGSKFPVGEVTCLDSEDLPLLHKSLLEPSPMLESAGLFPNFDL 235
+T + QIAGRAGR+GS F GEVT + +DL L + L E P +++AGL P +
Sbjct: 447 DSITTSQALQIAGRAGRFGSSFKQGEVTAMHRDDLLQLKEILSEAVPPVKAAGLHPTPEQ 506
Query: 236 IYMYSRLHPDSSLYGILEHFLENAKLSENYFFANCEEVLKVATVIDQLPLRLHEKYLFCI 295
I M++ PD++L +++ F+ +++ YF N ++ +A +I +PL L +Y+FC
Sbjct: 507 IEMFAYHLPDATLSNLIDIFVSLSQVDGLYFVCNIDDFKFLADMIQHIPLNLRSRYVFCT 566
Query: 296 SPVDMNDDISSQGLTQFATNYSKKGIVQLREI--FTPGTLQVPKTQAALRELESIHKVLD 353
+P++ + L +FA +S+ + + T L PK L LE++H V D
Sbjct: 567 APLNRKEPFVCTTLLKFARQFSRNEPLTFDWLCRHTKWPLAPPKNIKELVHLEAVHDVFD 626
Query: 354 LYVWLSFRLEESFPDRELAAS-QKAI 378
LY+WLS+R + FPD L QK +
Sbjct: 627 LYLWLSYRFMDMFPDAALVRDIQKKL 652
>UNIPROTKB|F1NMV4 [details] [associations]
symbol:SUPV3L1 "ATP-dependent RNA helicase SUPV3L1,
mitochondrial" species:9031 "Gallus gallus" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR022192 Pfam:PF00271 Pfam:PF12513
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0004386 GeneTree:ENSGT00390000003100 IPI:IPI00818346
EMBL:AADN02028004 EMBL:AADN02028006 EMBL:AADN02027997
EMBL:AADN02027998 EMBL:AADN02027999 EMBL:AADN02028000
EMBL:AADN02028001 EMBL:AADN02028002 EMBL:AADN02028003
EMBL:AADN02028005 Ensembl:ENSGALT00000040774 ArrayExpress:F1NMV4
Uniprot:F1NMV4
Length = 794
Score = 749 (268.7 bits), Expect = 3.1e-74, P = 3.1e-74
Identities = 156/386 (40%), Positives = 240/386 (62%)
Query: 1 MADVVSDYDCAVIDEIQMLGCKTRGFSFTRALLGICANELHLCGDPAAVPLIQQILQVTG 60
M + Y+ AVIDEIQM+ RG+++TRALLG+CA E+H+CG+ AA+ L+ +++ TG
Sbjct: 266 MCSTNTPYEVAVIDEIQMIRDPARGWAWTRALLGLCAEEIHVCGEGAAIDLVTELMYTTG 325
Query: 61 DDVKVQSYERLSPLVPLNVPLGSFSNIQTGDCIVTFSRHAIYRLKKAIESRGKHLCSIVY 120
++V+V++Y+RL+PL L+ L S N+Q GDCIV FS++ IY + + IE+RG C+++Y
Sbjct: 326 EEVEVRNYKRLTPLTVLDYALESLDNLQPGDCIVCFSKNDIYSVSRQIEARGLE-CAVIY 384
Query: 121 GSLPPETRTRQATRFNDASSEFDVLVASDAIGMGLNLNISRIIFS-----TMKKFDGVEL 175
GSLPP T+ QA +FND + +LVA+DAIGMGLNL I RIIF+ T+ + E+
Sbjct: 385 GSLPPGTKLEQAKKFNDPNDPCKILVATDAIGMGLNLCIKRIIFNSIVKPTVNEKGEKEI 444
Query: 176 RDLTVPEVKQIAGRAGRYGSKFPVGEVTCLDSEDLPLLHKSLLEPSPMLESAGLFPNFDL 235
+T + QIAGRAGR+GS F GEVT + +DL L + L E P +++AGL P +
Sbjct: 445 DSITTSQALQIAGRAGRFGSSFKQGEVTAMHRDDLLQLKEILSEAVPPVKAAGLHPTPEQ 504
Query: 236 IYMYSRLHPDSSLYGILEHFLENAKLSENYFFANCEEVLKVATVIDQLPLRLHEKYLFCI 295
I M++ PD++L +++ F+ +++ YF N ++ +A +I +PL L +Y+FC
Sbjct: 505 IEMFAYHLPDATLSNLIDIFVSLSQVDGLYFVCNIDDFKFLADMIQHIPLNLRSRYVFCT 564
Query: 296 SPVDMNDDISSQGLTQFATNYSKKGIVQLREI--FTPGTLQVPKTQAALRELESIHKVLD 353
+P++ + L +FA +S+ + + T L PK L LE++H V D
Sbjct: 565 APLNRKEPFVCTTLLKFARQFSRNEPLTFDWLCRHTKWPLAPPKNIKELVHLEAVHDVFD 624
Query: 354 LYVWLSFRLEESFPDRELAAS-QKAI 378
LY+WLS+R + FPD L QK +
Sbjct: 625 LYLWLSYRFMDMFPDAALVRDIQKKL 650
>UNIPROTKB|Q5ZJT0 [details] [associations]
symbol:SUPV3L1 "ATP-dependent RNA helicase SUPV3L1,
mitochondrial" species:9031 "Gallus gallus" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0042645 "mitochondrial nucleoid"
evidence=IEA] [GO:0000958 "mitochondrial mRNA catabolic process"
evidence=ISS] [GO:0000962 "positive regulation of mitochondrial RNA
catabolic process" evidence=ISS] [GO:0006310 "DNA recombination"
evidence=ISS] [GO:0006401 "RNA catabolic process" evidence=ISS]
[GO:0043066 "negative regulation of apoptotic process"
evidence=ISS] [GO:0070584 "mitochondrion morphogenesis"
evidence=ISS] [GO:0070827 "chromatin maintenance" evidence=ISS]
[GO:0003725 "double-stranded RNA binding" evidence=ISS] [GO:0034458
"3'-5' RNA helicase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005739 "mitochondrion" evidence=ISS] [GO:0045025
"mitochondrial degradosome" evidence=ISS] [GO:0035946
"mitochondrial mRNA surveillance" evidence=ISS] [GO:2000827
"mitochondrial RNA surveillance" evidence=ISS] [GO:0035945
"mitochondrial ncRNA surveillance" evidence=ISS] [GO:0000965
"mitochondrial RNA 3'-end processing" evidence=ISS] [GO:0030307
"positive regulation of cell growth" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0003677
"DNA binding" evidence=ISS] [GO:0003678 "DNA helicase activity"
evidence=ISS] [GO:0005759 "mitochondrial matrix" evidence=ISS]
[GO:0032508 "DNA duplex unwinding" evidence=ISS] InterPro:IPR001650
InterPro:IPR022192 Pfam:PF00271 Pfam:PF12513 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0043066
GO:GO:0030307 GO:GO:0005759 GO:GO:0003677 GO:GO:0042645
GO:GO:0006310 GO:GO:0003725 PROSITE:PS51192 GO:GO:0003678
GO:GO:0004004 GO:GO:0070584 GO:GO:0000958 eggNOG:COG0513
GO:GO:0045025 GO:GO:0000965 GO:GO:0000962 GO:GO:0070827
HOGENOM:HOG000175283 EMBL:AJ720354 IPI:IPI00818346
RefSeq:NP_001006498.1 UniGene:Gga.22594 ProteinModelPortal:Q5ZJT0
STRING:Q5ZJT0 GeneID:423697 KEGG:gga:423697 CTD:6832
HOVERGEN:HBG108522 OrthoDB:EOG4SXNBZ NextBio:20826130 GO:GO:0034458
GO:GO:0035946 GO:GO:0035945 Uniprot:Q5ZJT0
Length = 794
Score = 749 (268.7 bits), Expect = 3.1e-74, P = 3.1e-74
Identities = 156/386 (40%), Positives = 240/386 (62%)
Query: 1 MADVVSDYDCAVIDEIQMLGCKTRGFSFTRALLGICANELHLCGDPAAVPLIQQILQVTG 60
M + Y+ AVIDEIQM+ RG+++TRALLG+CA E+H+CG+ AA+ L+ +++ TG
Sbjct: 266 MCSTNTPYEVAVIDEIQMIRDPARGWAWTRALLGLCAEEIHVCGEGAAIDLVTELMYTTG 325
Query: 61 DDVKVQSYERLSPLVPLNVPLGSFSNIQTGDCIVTFSRHAIYRLKKAIESRGKHLCSIVY 120
++V+V++Y+RL+PL L+ L S N+Q GDCIV FS++ IY + + IE+RG C+++Y
Sbjct: 326 EEVEVRNYKRLTPLTVLDYALESLDNLQPGDCIVCFSKNDIYSVSRQIEARGLE-CAVIY 384
Query: 121 GSLPPETRTRQATRFNDASSEFDVLVASDAIGMGLNLNISRIIFS-----TMKKFDGVEL 175
GSLPP T+ QA +FND + +LVA+DAIGMGLNL I RIIF+ T+ + E+
Sbjct: 385 GSLPPGTKLEQAKKFNDPNDPCKILVATDAIGMGLNLCIKRIIFNSIVKPTVNEKGEKEI 444
Query: 176 RDLTVPEVKQIAGRAGRYGSKFPVGEVTCLDSEDLPLLHKSLLEPSPMLESAGLFPNFDL 235
+T + QIAGRAGR+GS F GEVT + +DL L + L E P +++AGL P +
Sbjct: 445 DSITTSQALQIAGRAGRFGSSFKQGEVTAMHRDDLLQLKEILSEAVPPVKAAGLHPTPEQ 504
Query: 236 IYMYSRLHPDSSLYGILEHFLENAKLSENYFFANCEEVLKVATVIDQLPLRLHEKYLFCI 295
I M++ PD++L +++ F+ +++ YF N ++ +A +I +PL L +Y+FC
Sbjct: 505 IEMFAYHLPDATLSNLIDIFVSLSQVDGLYFVCNIDDFKFLADMIQHIPLNLRSRYVFCT 564
Query: 296 SPVDMNDDISSQGLTQFATNYSKKGIVQLREI--FTPGTLQVPKTQAALRELESIHKVLD 353
+P++ + L +FA +S+ + + T L PK L LE++H V D
Sbjct: 565 APLNRKEPFVCTTLLKFARQFSRNEPLTFDWLCRHTKWPLAPPKNIKELVHLEAVHDVFD 624
Query: 354 LYVWLSFRLEESFPDRELAAS-QKAI 378
LY+WLS+R + FPD L QK +
Sbjct: 625 LYLWLSYRFMDMFPDAALVRDIQKKL 650
>ZFIN|ZDB-GENE-030131-2838 [details] [associations]
symbol:supv3l1 "suppressor of var1, 3-like 1 (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0016817 "hydrolase
activity, acting on acid anhydrides" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0001889 "liver development" evidence=IMP] [GO:0000958
"mitochondrial mRNA catabolic process" evidence=ISS] [GO:0003677
"DNA binding" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA;ISS]
[GO:0034458 "3'-5' RNA helicase activity" evidence=ISS] [GO:0070584
"mitochondrion morphogenesis" evidence=ISS] [GO:0070827 "chromatin
maintenance" evidence=ISS] [GO:0030307 "positive regulation of cell
growth" evidence=ISS] [GO:0000965 "mitochondrial RNA 3'-end
processing" evidence=ISS] [GO:0035945 "mitochondrial ncRNA
surveillance" evidence=ISS] [GO:0032508 "DNA duplex unwinding"
evidence=ISS] [GO:0000962 "positive regulation of mitochondrial RNA
catabolic process" evidence=ISS] [GO:0003725 "double-stranded RNA
binding" evidence=ISS] [GO:0003678 "DNA helicase activity"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005759 "mitochondrial matrix" evidence=ISS]
[GO:0006310 "DNA recombination" evidence=ISS] [GO:0035946
"mitochondrial mRNA surveillance" evidence=ISS] [GO:0045025
"mitochondrial degradosome" evidence=ISS] [GO:0043066 "negative
regulation of apoptotic process" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0042645 "mitochondrial
nucleoid" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR022192 Pfam:PF00271 Pfam:PF12513
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-030131-2838
GO:GO:0005524 GO:GO:0001889 GO:GO:0003676 GO:GO:0004386
GeneTree:ENSGT00390000003100 OMA:ADMIQHI HOVERGEN:HBG108522
EMBL:BX546482 IPI:IPI00491012 UniGene:Dr.78491
Ensembl:ENSDART00000111774 Uniprot:B8A5H7
Length = 763
Score = 724 (259.9 bits), Expect = 1.4e-71, P = 1.4e-71
Identities = 153/388 (39%), Positives = 238/388 (61%)
Query: 1 MADVVSDYDCAVIDEIQMLGCKTRGFSFTRALLGICANELHLCGDPAAVPLIQQILQVTG 60
M V + Y+ AVIDEIQM+ RG+++TRALLG+CA E+H+CG+ AAV I +++ TG
Sbjct: 276 MCSVTTPYEVAVIDEIQMIKDPARGWAWTRALLGLCAEEIHVCGEAAAVDFITELMFTTG 335
Query: 61 DDVKVQSYERLSPLVPLNVPLGSFSNIQTGDCIVTFSRHAIYRLKKAIESRGKHLCSIVY 120
++V+V +Y+RL+P N + S N++ GDCIV FS++ IY + + IE RG C+++Y
Sbjct: 336 EEVEVHNYKRLTPFSISNHAVESLDNLKPGDCIVCFSKNDIYSISRQIEIRGLE-CAVIY 394
Query: 121 GSLPPETRTRQATRFNDASSEFDVLVASDAIGMGLNLNISRIIFSTMKKFD----GV-EL 175
GSLPP T+ QA +FND +LVA+DAIGMGLNL+I RIIF+++ K G E+
Sbjct: 395 GSLPPGTKLAQAKKFNDPDDPCKILVATDAIGMGLNLSIRRIIFNSLVKHSLNEKGEKEV 454
Query: 176 RDLTVPEVKQIAGRAGRYGSKFPVGEVTCLDSEDLPLLHKSLLEPSPMLESAGLFPNFDL 235
++ + QIAGRAGR+ S F GEVT + +DLP+L + L +P + +AGL P +
Sbjct: 455 DTISTSQALQIAGRAGRFSSVFKEGEVTTMHRDDLPVLKEILGKPVDPIATAGLHPTAEQ 514
Query: 236 IYMYSRLHPDSSLYGILEHFLENAKLSENYFFANCEEVLKVATVIDQLPLRLHEKYLFCI 295
I M++ P ++L +++ F+ +++ YF N ++ +A +I +PL L +Y+FC
Sbjct: 515 IEMFAYHLPQATLSNLIDIFVSLSQVDGLYFVCNIDDFKFLADMIQHIPLNLRSRYVFCT 574
Query: 296 SPVDMNDDISSQGLTQFATNYSKKGIVQL----REIFTPGTLQVPKTQAALRELESIHKV 351
+P++ +FA +S+ + R++ P L PK L LE++H V
Sbjct: 575 APINKKQPFVCTSFLKFARQFSRDEPLTFNWVCRQVNWP--LSPPKNIKDLVHLEAVHDV 632
Query: 352 LDLYVWLSFRLEESFPD-RELAASQKAI 378
LDLY+WLS+R + FPD ++ QK +
Sbjct: 633 LDLYLWLSYRFMDMFPDSNQIREIQKEL 660
>UNIPROTKB|G4MUT4 [details] [associations]
symbol:MGG_01682 "ATP-dependent RNA helicase SUV3"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR022192 Pfam:PF00271 Pfam:PF12513 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
EMBL:CM001232 RefSeq:XP_003714671.1 ProteinModelPortal:G4MUT4
EnsemblFungi:MGG_01682T0 GeneID:2679359 KEGG:mgr:MGG_01682
Uniprot:G4MUT4
Length = 757
Score = 510 (184.6 bits), Expect = 8.6e-68, Sum P(2) = 8.6e-68
Identities = 104/196 (53%), Positives = 134/196 (68%)
Query: 1 MADVVSDYDCAVIDEIQMLGCKTRGFSFTRALLGICANELHLCGDPAAVPLIQQILQVTG 60
MA + + D AVIDEIQM+ RG+++T+A+LGI A E+HLCG+ V LI+++ + G
Sbjct: 275 MAPLNTVVDVAVIDEIQMIADPDRGWAWTQAVLGIQAREVHLCGEERTVDLIKRLAESMG 334
Query: 61 DDVKVQSYERLSPLVPLNVPLGS-FSNIQTGDCIVTFSRHAIYRLKKAIESRGKHLCSIV 119
D+ V YERLSPL P+N LG +Q GD +V FSR ++ LK+ IE + C+IV
Sbjct: 335 DECIVHQYERLSPLEPMNSSLGGDLKKLQKGDAVVAFSRIGLHALKRGIEKQTGKRCAIV 394
Query: 120 YGSLPPETRTRQATRFNDASSEFDVLVASDAIGMGLNLNISRIIFSTMKKFDGVELRDLT 179
YGSLPPETR QA FND +E+D +VASDAIGMGLNL I R++F T KFDG E R L
Sbjct: 395 YGSLPPETRAEQAALFNDPDNEYDYIVASDAIGMGLNLEIRRVVFDTTNKFDGSERRFLG 454
Query: 180 VPEVKQIAGRAGRYGS 195
E+KQI GRAGR+ S
Sbjct: 455 ESEIKQIGGRAGRFRS 470
Score = 202 (76.2 bits), Expect = 8.6e-68, Sum P(2) = 8.6e-68
Identities = 58/212 (27%), Positives = 108/212 (50%)
Query: 190 AGRYGSKFPVGEVTCLDSEDLPLLHKSLLEPSPMLESAGLFPNFDLIYMYSRLHP-DSSL 248
A R S+ VG VTC+D DL + K+ P +++AGL P +I +S D+ L
Sbjct: 486 ARRAVSRPSVGYVTCVDDGDLRRIQKAFEVEVPPIKAAGLLPPAAIIEKFSSYFAQDTPL 545
Query: 249 YGILEHFLENAKLSENYFFANCEEVLKVATVIDQLPLRLHEKYLFCISPVDMNDD----I 304
IL E + S++YF N ++ ++ A +I P+ + ++ + +P+D I
Sbjct: 546 SHILLKIREVVRTSDDYFVCNFDDWIEAADIIQAFPMPISDRLVLLSAPLDYKTKEFMRI 605
Query: 305 SSQGLTQFATNY--SKKGIVQLREIFTPGT-LQVPKTQAALRELESIHKVLDLYVWLSFR 361
++ +++ + S G+ +L + T + Q L +LE++HK L LY+WLS+R
Sbjct: 606 CAKCVSELKDGHLLSLDGL-ELEVLDVDDTCFNKYRAQEQLNKLETLHKCLILYLWLSYR 664
Query: 362 LEESFPDRELAASQKAICSMLIEEFLERLGWQ 393
+ F ++LA K++ I E L+++ ++
Sbjct: 665 YQGVFVSQDLAFHAKSLVEEKIRERLDKVDFR 696
>FB|FBgn0037232 [details] [associations]
symbol:CG9791 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR022192
Pfam:PF00271 Pfam:PF12513 PROSITE:PS51194 SMART:SM00490
EMBL:AE014297 GO:GO:0005524 GO:GO:0005634 GO:GO:0005759
GO:GO:0003677 PROSITE:PS51192 GO:GO:0003678 eggNOG:COG0513
GeneTree:ENSGT00390000003100 OMA:ADMIQHI EMBL:AY058527
RefSeq:NP_649452.3 UniGene:Dm.4174 ProteinModelPortal:Q9VN03
SMR:Q9VN03 IntAct:Q9VN03 MINT:MINT-1742266 STRING:Q9VN03
PaxDb:Q9VN03 EnsemblMetazoa:FBtr0273009 GeneID:40543
KEGG:dme:Dmel_CG9791 UCSC:CG9791-RC FlyBase:FBgn0037232
InParanoid:Q9VN03 OrthoDB:EOG48KPS7 PhylomeDB:Q9VN03
GenomeRNAi:40543 NextBio:819279 Bgee:Q9VN03 Uniprot:Q9VN03
Length = 763
Score = 680 (244.4 bits), Expect = 6.5e-67, P = 6.5e-67
Identities = 151/377 (40%), Positives = 228/377 (60%)
Query: 1 MADVVSDYDCAVIDEIQMLGCKTRGFSFTRALLGICANELHLCGDPAAVPLIQQILQVTG 60
M V + Y+ AVIDEIQ + RG+++TRA LG+ A+E+H+CG+P A+ L+Q+I + TG
Sbjct: 265 MTSVNTPYEVAVIDEIQQIRDPQRGWAWTRAFLGLIADEVHVCGEPGALDLLQKICETTG 324
Query: 61 DDVKVQSYERLSPLVPLNVPLGSFSNIQTGDCIVTFSRHAIYRLKKAIESRGKHLCSIVY 120
+ V+V+ Y+RL+ L N LGS NI GDCIV FS+H IY + + IE+RGK + +++Y
Sbjct: 325 ETVEVRLYDRLTELTVENTALGSLDNIVPGDCIVCFSKHDIYTVSREIEARGKEV-AVIY 383
Query: 121 GSLPPETRTRQATRFNDASSEFDVLVASDAIGMGLNLNISRIIF-----STMKKFDGVEL 175
G LPP T+ QA +FND ++ V+VA+DAIGMGLNL+I RIIF +M + E+
Sbjct: 384 GGLPPGTKLAQAAKFNDPANSCKVMVATDAIGMGLNLSIRRIIFYSLIKPSMNERGEREI 443
Query: 176 RDLTVPEVKQIAGRAGRYGSKFPVGEVTCLDSEDLPLLHKSLLE-PSPMLESAGLFPNFD 234
++V QIAGRAGR+ +++ G VT SEDL L + L P P ++ AGL P D
Sbjct: 444 DTISVSSALQIAGRAGRFRTQWEHGYVTAFKSEDLQTLQRILARTPEP-IKQAGLHPTAD 502
Query: 235 LIYMYSRLHPDSSLYGILEHFLENAKLSEN-YFFANCEEVLKVATVIDQLPLRLHEKYLF 293
I +Y+ P SSL +++ F+ + ++ YF N E+ +A +I + L L +Y+F
Sbjct: 503 QIELYAYHLPSSSLSNLMDIFVNLCTVDDSLYFMCNIEDFKFLAEMIQHVALPLRARYVF 562
Query: 294 CISPVDMNDDISSQGLTQFATNYSKKGIVQLREIFTP-G-TLQVPKTQAALRELESIHKV 351
C +P++ + A YS+ + I G ++PKT L LE++ V
Sbjct: 563 CCAPINRKMPFVCSMFLKVARQYSRNEPITFDFIKKNCGWPFKLPKTILDLVHLEAVFDV 622
Query: 352 LDLYVWLSFRLEESFPD 368
+DLY+WLS+R + FP+
Sbjct: 623 MDLYLWLSYRFMDLFPE 639
>DICTYBASE|DDB_G0278937 [details] [associations]
symbol:DDB_G0278937 "ATP-dependent RNA helicase
SUPV3L1, mitochondrial" species:44689 "Dictyostelium discoideum"
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR022192
Pfam:PF00271 Pfam:PF12513 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0278937 GO:GO:0005524 GO:GO:0003676
EMBL:AAFI02000024 GO:GO:0004386 eggNOG:COG0513 RefSeq:XP_641977.1
EnsemblProtists:DDB0218122 GeneID:8621709 KEGG:ddi:DDB_G0278937
InParanoid:Q54XQ3 ProtClustDB:CLSZ2846828 Uniprot:Q54XQ3
Length = 904
Score = 669 (240.6 bits), Expect = 9.4e-66, P = 9.4e-66
Identities = 155/394 (39%), Positives = 224/394 (56%)
Query: 9 DCAVIDEIQMLGCKTRGFSFTRALLGICANELHLCGDPAAVPLIQQILQVTGDDVKVQSY 68
+ AVIDE Q++ RG S+TRA+LGI A ELHLCGD A+ L+++I ++TGD + + +Y
Sbjct: 485 EVAVIDEFQLMSDTIRGQSWTRAILGIPAVELHLCGDNTAIELVKKICEITGDTLTINNY 544
Query: 69 ERLSPLVPLNVPLGSFSNIQTGDCIVTFSRHAIYRLKKAIESRGKHLCSIVYGSLPPETR 128
ERLS LV P+ S +I+ GDC++ F + I K +E +G C++VYGSLPP TR
Sbjct: 545 ERLSTLVIDEEPIASMGDIKKGDCLICFKKKDIIFYKNYLEKQGLK-CAVVYGSLPPTTR 603
Query: 129 TRQATRFNDASSEFDVLVASDAIGMGLNLNISRIIFSTMKKFDGVELRDLTVPEVKQIAG 188
+QA FN S DVL+A+DAIGMGLNLNI R+IF T+KK+DG R+L EVKQIAG
Sbjct: 604 VQQAKLFNTDES-VDVLIATDAIGMGLNLNIGRVIFLTLKKYDGEVDRELYASEVKQIAG 662
Query: 189 RAGRYGSKFPVGEVTCLDSEDLPLLHKSLLEPSPMLESAGLFPNFDLIYMYSRLHPDSSL 248
RAGR+G+K+PVG VT +DL + K P+ + + AG+ P I +S L +L
Sbjct: 663 RAGRFGTKYPVGSVTTFTRKDLAKIRKDWQSPNIISDRAGISPLSQQIEKFSLLPQCKNL 722
Query: 249 Y--GILEHFLENAKLSENYFFANCEEVLKVATVIDQLPLRLHEKYLFCISPV-DMNDDIS 305
+L F+EN + ++YF N +E + +A + D + + +K+LF P+ + ++I
Sbjct: 723 KFSEVLTEFMENTNIDKHYFLGNFQEFITIAQITDFTTMSVKDKFLFSQCPLSNSKNEIP 782
Query: 306 SQGLTQFATNYSKKGIVQL----------REIFTPGTLQVPKTQAALRELESIHKVLDLY 355
+ ++A YSK V L + F K L LES + V D+Y
Sbjct: 783 TSHYIKYALGYSKDRKVNLGFDIDKINNAEKRFNESPDDTKKFSEYLSTLESYYSVTDIY 842
Query: 356 VWLSFRLEESFPDRELAASQKAICSMLIEEFLER 389
+WLS F + A + S I LE+
Sbjct: 843 LWLSNYFPTHFIQVKNAIELSELISQRISLVLEQ 876
>WB|WBGene00007444 [details] [associations]
symbol:C08F8.2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016817 "hydrolase activity, acting on acid
anhydrides" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] InterPro:IPR001650
InterPro:IPR022192 Pfam:PF00271 Pfam:PF12513 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0006898 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0005759 GO:GO:0003677 GO:GO:0000003 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0003678 eggNOG:COG0513
EMBL:Z73103 HOGENOM:HOG000175283 PIR:T19103 RefSeq:NP_001040911.1
RefSeq:NP_001040912.1 UniGene:Cel.20693 ProteinModelPortal:Q17828
SMR:Q17828 STRING:Q17828 PaxDb:Q17828 EnsemblMetazoa:C08F8.2a
GeneID:178022 KEGG:cel:CELE_C08F8.2 UCSC:C08F8.2a CTD:178022
WormBase:C08F8.2a WormBase:C08F8.2b GeneTree:ENSGT00390000003100
InParanoid:Q17828 OMA:ADMIQHI NextBio:899396 Uniprot:Q17828
Length = 721
Score = 659 (237.0 bits), Expect = 1.1e-64, P = 1.1e-64
Identities = 151/389 (38%), Positives = 228/389 (58%)
Query: 9 DCAVIDEIQMLGCKTRGFSFTRALLGICANELHLCGDPAAVPLIQQILQVTGDDVKVQSY 68
+ AVIDEIQML + RG+++TRALLG A+E+HLCG+PAA+ +++++L+ G+ V+V+ Y
Sbjct: 275 EVAVIDEIQMLRDEQRGWAWTRALLGAAADEIHLCGEPAAIDIVKKLLEPIGETVEVRYY 334
Query: 69 ERLSPLVPLNVPLGSFSNIQTGDCIVTFSRHAIYRLKKAIESRGKHLCSIVYGSLPPETR 128
ER SPL + + S+SNI+ GDCIV FS+ +I+ K +E G +++YG LPP T+
Sbjct: 335 ERKSPLAIADKAIESYSNIEPGDCIVCFSKRSIFFNSKKLEENGIKP-AVIYGDLPPGTK 393
Query: 129 TRQATRFNDASSEFDVLVASDAIGMGLNLNISRIIFSTMKKFDGVELRDLTVPEVKQIAG 188
QA +FND E +VLVA+DAIGMGLNLNI R+IF++ + EL L QIAG
Sbjct: 394 LAQAAKFNDPDDECNVLVATDAIGMGLNLNIRRVIFNSCTR--QTEL--LPTYAALQIAG 449
Query: 189 RAGRYGSKFPVGEVTCLDSEDLPLLHKSLLEPSPMLESAGLFPNFDLIYMYSRLHPDSSL 248
RAGR+G+ + G T + EDL L L E + + G+ P +D I +S P +S
Sbjct: 450 RAGRFGTAYANGVATTMRKEDLGTLKAILSEKIEPIANVGIAPTYDQIETFSFHLPQASF 509
Query: 249 YGILEHFLENAKLSENYFFANCEEVLKVATVIDQLPLRLHEKYLFCISPVDMNDDISSQG 308
+L+ F+ +S+++F ++ ++A +IDQ+PL L +Y FC SP++ D +S
Sbjct: 510 VRLLDLFVSVCSVSDHFFICTVYDMRELAVLIDQIPLPLKVRYTFCTSPLNTEDKRTSAV 569
Query: 309 LTQFATNYSKKGIVQLREIFTPGTLQVPKTQAALREL---ESIHKVLDLYVWLSFRLEES 365
+ A +S G E PK L EL E +++LD Y+WLS R +
Sbjct: 570 FVKMARRFST-GQALTYEWLIDMLEWPPKPATTLNELSLLEQNYEILDQYMWLSMRFPDM 628
Query: 366 FPDR-ELAASQKAICSML---IEEFLERL 390
PD + + K + SM+ +E F+ L
Sbjct: 629 LPDEPRVREASKHLDSMIQEGVESFMSLL 657
>UNIPROTKB|Q17828 [details] [associations]
symbol:C08F8.2 "ATP-dependent RNA helicase SUV3 homolog,
mitochondrial" species:6239 "Caenorhabditis elegans" [GO:0032508
"DNA duplex unwinding" evidence=ISS] [GO:0005759 "mitochondrial
matrix" evidence=ISS] [GO:0003678 "DNA helicase activity"
evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS]
InterPro:IPR001650 InterPro:IPR022192 Pfam:PF00271 Pfam:PF12513
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0005759 GO:GO:0003677 GO:GO:0000003
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
eggNOG:COG0513 EMBL:Z73103 HOGENOM:HOG000175283 PIR:T19103
RefSeq:NP_001040911.1 RefSeq:NP_001040912.1 UniGene:Cel.20693
ProteinModelPortal:Q17828 SMR:Q17828 STRING:Q17828 PaxDb:Q17828
EnsemblMetazoa:C08F8.2a GeneID:178022 KEGG:cel:CELE_C08F8.2
UCSC:C08F8.2a CTD:178022 WormBase:C08F8.2a WormBase:C08F8.2b
GeneTree:ENSGT00390000003100 InParanoid:Q17828 OMA:ADMIQHI
NextBio:899396 Uniprot:Q17828
Length = 721
Score = 659 (237.0 bits), Expect = 1.1e-64, P = 1.1e-64
Identities = 151/389 (38%), Positives = 228/389 (58%)
Query: 9 DCAVIDEIQMLGCKTRGFSFTRALLGICANELHLCGDPAAVPLIQQILQVTGDDVKVQSY 68
+ AVIDEIQML + RG+++TRALLG A+E+HLCG+PAA+ +++++L+ G+ V+V+ Y
Sbjct: 275 EVAVIDEIQMLRDEQRGWAWTRALLGAAADEIHLCGEPAAIDIVKKLLEPIGETVEVRYY 334
Query: 69 ERLSPLVPLNVPLGSFSNIQTGDCIVTFSRHAIYRLKKAIESRGKHLCSIVYGSLPPETR 128
ER SPL + + S+SNI+ GDCIV FS+ +I+ K +E G +++YG LPP T+
Sbjct: 335 ERKSPLAIADKAIESYSNIEPGDCIVCFSKRSIFFNSKKLEENGIKP-AVIYGDLPPGTK 393
Query: 129 TRQATRFNDASSEFDVLVASDAIGMGLNLNISRIIFSTMKKFDGVELRDLTVPEVKQIAG 188
QA +FND E +VLVA+DAIGMGLNLNI R+IF++ + EL L QIAG
Sbjct: 394 LAQAAKFNDPDDECNVLVATDAIGMGLNLNIRRVIFNSCTR--QTEL--LPTYAALQIAG 449
Query: 189 RAGRYGSKFPVGEVTCLDSEDLPLLHKSLLEPSPMLESAGLFPNFDLIYMYSRLHPDSSL 248
RAGR+G+ + G T + EDL L L E + + G+ P +D I +S P +S
Sbjct: 450 RAGRFGTAYANGVATTMRKEDLGTLKAILSEKIEPIANVGIAPTYDQIETFSFHLPQASF 509
Query: 249 YGILEHFLENAKLSENYFFANCEEVLKVATVIDQLPLRLHEKYLFCISPVDMNDDISSQG 308
+L+ F+ +S+++F ++ ++A +IDQ+PL L +Y FC SP++ D +S
Sbjct: 510 VRLLDLFVSVCSVSDHFFICTVYDMRELAVLIDQIPLPLKVRYTFCTSPLNTEDKRTSAV 569
Query: 309 LTQFATNYSKKGIVQLREIFTPGTLQVPKTQAALREL---ESIHKVLDLYVWLSFRLEES 365
+ A +S G E PK L EL E +++LD Y+WLS R +
Sbjct: 570 FVKMARRFST-GQALTYEWLIDMLEWPPKPATTLNELSLLEQNYEILDQYMWLSMRFPDM 628
Query: 366 FPDR-ELAASQKAICSML---IEEFLERL 390
PD + + K + SM+ +E F+ L
Sbjct: 629 LPDEPRVREASKHLDSMIQEGVESFMSLL 657
>UNIPROTKB|Q295E6 [details] [associations]
symbol:GA22038 "ATP-dependent RNA helicase SUV3 homolog,
mitochondrial" species:46245 "Drosophila pseudoobscura
pseudoobscura" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003678
"DNA helicase activity" evidence=ISS] [GO:0005759 "mitochondrial
matrix" evidence=ISS] [GO:0032508 "DNA duplex unwinding"
evidence=ISS] InterPro:IPR001650 InterPro:IPR022192 Pfam:PF00271
Pfam:PF12513 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005759 GO:GO:0003677 EMBL:CM000070
PROSITE:PS51192 GO:GO:0003678 eggNOG:COG0513 OMA:ADMIQHI
OrthoDB:EOG48KPS7 RefSeq:XP_001359616.1 ProteinModelPortal:Q295E6
GeneID:4802755 KEGG:dpo:Dpse_GA22038 FlyBase:FBgn0082022
InParanoid:Q295E6 Uniprot:Q295E6
Length = 762
Score = 653 (234.9 bits), Expect = 4.7e-64, P = 4.7e-64
Identities = 151/388 (38%), Positives = 231/388 (59%)
Query: 1 MADVVSDYDCAVIDEIQMLGCKTRGFSFTRALLGICANELHLCGDPAAVPLIQQILQVTG 60
M V + Y+ AVIDEIQ + RG+++TRA LG+ A+E+H+CG+ A+ L+Q+I + TG
Sbjct: 265 MTSVNTPYEVAVIDEIQQIRDPQRGWAWTRAFLGLIADEVHVCGEAGALELLQKICETTG 324
Query: 61 DDVKVQSYERLSPLVPLNVPLGSFSNIQTGDCIVTFSRHAIYRLKKAIESRGKHLCSIVY 120
+ V+V+ Y+RL+ L + LGS N+ GDCIV FS+H IY + + IE+RGK + +++Y
Sbjct: 325 ETVEVRRYDRLTELTVEDSALGSLDNVMPGDCIVCFSKHDIYTVSREIEARGKEV-AVIY 383
Query: 121 GSLPPETRTRQATRFNDASSEFDVLVASDAIGMGLNLNISRIIF-----STMKKFDGVEL 175
G LPP T+ QA +FND ++ V+VA+DAIGMGLNL+I RIIF TM + E+
Sbjct: 384 GGLPPGTKLAQAAKFNDPANSCKVMVATDAIGMGLNLSIRRIIFYSLVKPTMNERGEREI 443
Query: 176 RDLTVPEVKQIAGRAGRYGSKFPVGEVTCLDSEDLPLLHKSLLE-PSPMLESAGLFPNFD 234
++V QIAGRAGR+ +++ G VT SEDL L + L + P P L+ AGL P D
Sbjct: 444 DTISVSSALQIAGRAGRFRTQWEHGYVTAFKSEDLQTLQRILAQTPEP-LKQAGLHPTAD 502
Query: 235 LIYMYSRLHPDSSLYGILEHFLENAKLSEN-YFFANCEEVLKVATVIDQLPLRLHEKYLF 293
I +Y+ P+SSL +++ F+ + ++ YF N E+ +A +I +PL L +Y+F
Sbjct: 503 QIELYAYHLPNSSLSNLMDIFVNLCTVDDSLYFMCNIEDFKFLAEMIQHVPLPLRARYVF 562
Query: 294 CISPVDMNDDISSQGLTQFATNYSKKGIVQLREIFTP-G-TLQVPKTQAALRELESIHKV 351
C +P++ + A YS+ + I + G ++PKT L LES+ V
Sbjct: 563 CCAPINRKMPFVCSMFLKIARQYSRNEPITFEFIKSNCGWPFKLPKTILDLVHLESVFDV 622
Query: 352 LDLYVWLSFRLEESFPDR-ELAASQKAI 378
+DLY R + FP+ + +QK +
Sbjct: 623 MDLY-----RFMDLFPEAGNVREAQKEL 645
>UNIPROTKB|Q61SU7 [details] [associations]
symbol:CBG06022 "ATP-dependent RNA helicase SUV3 homolog,
mitochondrial" species:6238 "Caenorhabditis briggsae" [GO:0003677
"DNA binding" evidence=ISS] [GO:0003678 "DNA helicase activity"
evidence=ISS] [GO:0005759 "mitochondrial matrix" evidence=ISS]
[GO:0032508 "DNA duplex unwinding" evidence=ISS] InterPro:IPR001650
InterPro:IPR022192 Pfam:PF00271 Pfam:PF12513 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005759
GO:GO:0003677 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0003678 eggNOG:COG0513 EMBL:HE600909 EnsemblMetazoa:CBG06022
WormBase:CBG06022 HOGENOM:HOG000175283 Uniprot:Q61SU7
Length = 721
Score = 648 (233.2 bits), Expect = 1.6e-63, P = 1.6e-63
Identities = 145/383 (37%), Positives = 224/383 (58%)
Query: 9 DCAVIDEIQMLGCKTRGFSFTRALLGICANELHLCGDPAAVPLIQQILQVTGDDVKVQSY 68
+ VIDEIQML + RG+++TRALLG A+E+HLCG+PAA+ +++++L+ G+ V+V+ Y
Sbjct: 273 EVVVIDEIQMLRDEQRGWAWTRALLGAAADEIHLCGEPAAINIVKKLLEPIGETVEVRYY 332
Query: 69 ERLSPLVPLNVPLGSFSNIQTGDCIVTFSRHAIYRLKKAIESRGKHLCSIVYGSLPPETR 128
+R SPL + + S+SNI+ GDCIV FS+ A++ K +E G +++YG LPP T+
Sbjct: 333 DRKSPLTIADRAIESYSNIEPGDCIVCFSKRAVFFNSKKLEENGIKP-AVIYGDLPPGTK 391
Query: 129 TRQATRFNDASSEFDVLVASDAIGMGLNLNISRIIFSTMKKFDGVELRDLTVPEVKQIAG 188
QA +FND E +VLVA+DAIGMGLNLNI R+IF++ + EL L QIAG
Sbjct: 392 LAQAAKFNDPDDECNVLVATDAIGMGLNLNIRRVIFNSCTR--QTEL--LPTYAALQIAG 447
Query: 189 RAGRYGSKFPVGEVTCLDSEDLPLLHKSLLEPSPMLESAGLFPNFDLIYMYSRLHPDSSL 248
RAGR+G+ + G T + EDL L L E + + G+ P +D I +S P +S
Sbjct: 448 RAGRFGTAYANGVATTMRKEDLGTLKTILAEKVEPITNVGIAPTYDQIETFSFHLPQASF 507
Query: 249 YGILEHFLENAKLSENYFFANCEEVLKVATVIDQLPLRLHEKYLFCISPVDMNDDISSQG 308
+L+ F+ +S+++F ++ ++A +IDQ+PL L +Y FC SP++ +D ++
Sbjct: 508 VRLLDLFVSVCSVSDHFFICTVYDMRELAVLIDQVPLPLKVRYTFCTSPLNTDDKRTAAV 567
Query: 309 LTQFATNYSKKGIVQLREIFTPGTLQVPKTQAALREL---ESIHKVLDLYVWLSFRLEES 365
+ A ++ G E PK + L EL E ++VLD Y+WLS R +
Sbjct: 568 FVKMARRFAT-GQALTYEWLMDMLEWPPKPASTLSELSLLEQNYEVLDQYMWLSMRFPDM 626
Query: 366 FPDRELAASQKAICSMLIEEFLE 388
PD I +I++ +E
Sbjct: 627 LPDEPRVRDASKILDKMIQDGVE 649
>SGD|S000005950 [details] [associations]
symbol:SUV3 "ATP-dependent RNA helicase" species:4932
"Saccharomyces cerevisiae" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000957 "mitochondrial RNA catabolic process" evidence=IMP]
[GO:0006264 "mitochondrial DNA replication" evidence=IMP]
[GO:0000262 "mitochondrial chromosome" evidence=IDA] [GO:0005759
"mitochondrial matrix" evidence=IEA] [GO:0016817 "hydrolase
activity, acting on acid anhydrides" evidence=IEA] [GO:0045025
"mitochondrial degradosome" evidence=IDA] [GO:0008859
"exoribonuclease II activity" evidence=IDA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000372 "Group I intron splicing"
evidence=IGI] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR022192 Pfam:PF00271 Pfam:PF12513
PROSITE:PS51194 SMART:SM00490 SGD:S000005950 GO:GO:0005524
GO:GO:0005759 GO:GO:0003723 EMBL:BK006949 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 GO:GO:0000372
eggNOG:COG0513 EMBL:U36624 GO:GO:0006264 GO:GO:0045025
GO:GO:0000957 GeneTree:ENSGT00390000003100 OrthoDB:EOG4X6GJ1
EMBL:M91167 PIR:S63453 RefSeq:NP_015296.1 ProteinModelPortal:P32580
SMR:P32580 DIP:DIP-6302N IntAct:P32580 MINT:MINT-698589
STRING:P32580 PaxDb:P32580 PeptideAtlas:P32580 EnsemblFungi:YPL029W
GeneID:856078 KEGG:sce:YPL029W CYGD:YPL029w HOGENOM:HOG000248220
OMA:GTIEMIP NextBio:981083 Genevestigator:P32580 GermOnline:YPL029W
Uniprot:P32580
Length = 737
Score = 594 (214.2 bits), Expect = 8.4e-58, P = 8.4e-58
Identities = 141/405 (34%), Positives = 226/405 (55%)
Query: 1 MADVVSDYDCAVIDEIQMLGCKTRGFSFTRALLGICANELHLCGDPAAVPLIQQILQVTG 60
M + +D V+DEIQM+ RG+++T ALLG+ + E+HLCG+ + +PL++ I+++TG
Sbjct: 311 MVPINQKFDVVVLDEIQMMSDGDRGWAWTNALLGVVSKEVHLCGEKSVLPLVKSIVKMTG 370
Query: 61 DDVKVQSYERLSPLVPLNVPL-GSFSNIQTGDCIVTFSRHAIYRLKKAIESRGKHLCSIV 119
D + + YERL L P+ ++ GDC+V FS+ I LK IE +++
Sbjct: 371 DKLTINEYERLGKLSVEEKPIKDGIKGLRKGDCVVAFSKKKILDLKLKIEKDTNLKVAVI 430
Query: 120 YGSLPPETRTRQATRFNDASSEFDVLVASDAIGMGLNLNISRIIFSTMKKFDGVELRDLT 179
YGSLPPETR +QA FN+ E+D++VASDAIGMGLNL+I R++F+T K++G EL ++T
Sbjct: 431 YGSLPPETRVQQAALFNNG--EYDIMVASDAIGMGLNLSIDRVVFTTNMKYNGEELMEMT 488
Query: 180 VPEVKQIAGRAGRYGSK-----FPVGEVTCLDSEDLPLLHKSLLEPSPMLESAGLFPNFD 234
++KQI GRAGR+ S+ P G +T +S+ L + K++ P L++A +P +
Sbjct: 489 SSQIKQIGGRAGRFKSRSASGGVPQGFITSFESKVLKSVRKAIEAPVEYLKTAVTWPTDE 548
Query: 235 LIYMYSRLHPDSSLYGILEHFL--ENAKLSENYF-FANCEEVLKVATVIDQLP-LRLHEK 290
+ P + +L + E K S+N F ++ + LKV + + + + +K
Sbjct: 549 ICAQLMTQFPPGTPTSVLLQTISDELEKSSDNLFTLSDLKSKLKVIGLFEHMEDIPFFDK 608
Query: 291 YLFCISPV-DMNDDISSQGLTQFATNYSKK---GIVQLREIFTPGTLQ-VPKTQAALREL 345
+PV DM + ++ T+F +K+ G++ R F +P +L
Sbjct: 609 LKLSNAPVKDM--PMVTKAFTKFCETIAKRHTRGLLSYRLPFNLLDYNCIPNESYSLEVY 666
Query: 346 ESIHKVLDLYVWLSFRLEESFPDRELAASQKAICSMLIEEFLERL 390
ES++ ++ LY WLS R F D E A K C M+I E L+RL
Sbjct: 667 ESLYNIITLYFWLSNRYPNYFIDMESAKDLKYFCEMIIFEKLDRL 711
>POMBASE|SPAC637.11 [details] [associations]
symbol:rpm2 "mitochondrial ATP-dependent RNA helicase
Rpm2" species:4896 "Schizosaccharomyces pombe" [GO:0000965
"mitochondrial RNA 3'-end processing" evidence=IMP] [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005759
"mitochondrial matrix" evidence=ISS] [GO:0006401 "RNA catabolic
process" evidence=IMP] InterPro:IPR001650 InterPro:IPR022192
Pfam:PF00271 Pfam:PF12513 PROSITE:PS51194 SMART:SM00490
PomBase:SPAC637.11 GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0005759 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 GO:GO:0000965 PIR:T39003 RefSeq:NP_594629.1
ProteinModelPortal:O94445 STRING:O94445 EnsemblFungi:SPAC637.11.1
GeneID:2543678 KEGG:spo:SPAC637.11 OrthoDB:EOG4X6GJ1
NextBio:20804684 Uniprot:O94445
Length = 647
Score = 583 (210.3 bits), Expect = 1.2e-56, P = 1.2e-56
Identities = 141/401 (35%), Positives = 228/401 (56%)
Query: 1 MADVVSDYDCAVIDEIQMLGCKTRGFSFTRALLGICANELHLCGDPAAVPLIQQILQVTG 60
M ++ + +D AVIDEIQM+ +RG+++T+ LLG+ A E+HLCG+ + V L++ I ++T
Sbjct: 247 MCNLSTTFDVAVIDEIQMMADPSRGYAWTQCLLGLQAKEIHLCGEESVVKLVRSIAKMTQ 306
Query: 61 DDVKVQSYERLSPLVPLNVPL-GSFSNIQTGDCIVTFSRHAIYRLKKAIESR-GKHLCSI 118
DD V YERL+PL L G S ++ GDC+V FSR I+ LK I+ GK ++
Sbjct: 307 DDFTVYRYERLNPLHVAEKSLNGKLSELKDGDCVVAFSRKNIFTLKSKIDQALGKK-SAV 365
Query: 119 VYGSLPPETRTRQATRFNDASSEFDVLVASDAIGMGLNLNISRIIFSTMKKFDGVELRDL 178
+YGSLPPE R +QA+ FN SS+ ++L+ASDAIGMGLNL + RI+FS +KKF GV D+
Sbjct: 366 IYGSLPPEVRNQQASLFNSKSSDENILLASDAIGMGLNLGVKRIVFSDLKKFSGVSTIDI 425
Query: 179 TVPEVKQIAGRAGRY---GSKFPVGEVTCLDSEDLPLLHKSLLEPSPMLESAGLFPNFDL 235
VP++KQIAGRAGR+ GSK G VT L +D L++++ P+ L +A + DL
Sbjct: 426 PVPQIKQIAGRAGRHNPNGSKQSAGIVTTLYQKDFAKLNRAMNLPTKNLFNACIGAKDDL 485
Query: 236 IYMYSRLHPDSSLYGIL-EHFLENAKLSENYFFANCEEVLKVATVIDQLP-LRLHEKYLF 293
+ Y L D ++ + + + AK + + + + +D + L + +K
Sbjct: 486 FFRYLSLFSDDIPQKLIFDRYFKLAKTTTPFVVSEGALSTFIIEYLDHIKGLTIKDKIKL 545
Query: 294 CISPVDMNDDISSQGLTQFATNYSKKGIVQLREIFT-P-GTLQ--VPKTQAALRELESIH 349
PV + + + + ++ +Q+ ++ + P L+ +P T+ L++LE +H
Sbjct: 546 LGCPVLKHSKYAPLFIREIGCVIAQGKRLQIYDLKSVPLEILERGIPTTETELQQLEQLH 605
Query: 350 KVLDLYVWLSFRLEESFPDRELAASQKAICSMLIEEFLERL 390
K++ Y+W S R + A KAI + + + +L
Sbjct: 606 KLIVAYMWASIRYP-AILQNGAAEKTKAIAEAFLIKGISKL 645
>UNIPROTKB|A6QP28 [details] [associations]
symbol:SUPV3L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070827 "chromatin maintenance" evidence=IEA]
[GO:0070584 "mitochondrion morphogenesis" evidence=IEA] [GO:0045025
"mitochondrial degradosome" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0042645 "mitochondrial
nucleoid" evidence=IEA] [GO:0035946 "mitochondrial mRNA
surveillance" evidence=IEA] [GO:0035945 "mitochondrial ncRNA
surveillance" evidence=IEA] [GO:0034458 "3'-5' RNA helicase
activity" evidence=IEA] [GO:0030307 "positive regulation of cell
growth" evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0003678 "DNA helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0000965
"mitochondrial RNA 3'-end processing" evidence=IEA] [GO:0000962
"positive regulation of mitochondrial RNA catabolic process"
evidence=IEA] [GO:0000958 "mitochondrial mRNA catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0030307 GO:GO:0003677
GO:GO:0042645 GO:GO:0006310 GO:GO:0003725 GO:GO:0003678
GO:GO:0004004 GO:GO:0070584 GO:GO:0000958 eggNOG:COG0513
GO:GO:0045025 GO:GO:0000965 GO:GO:0000962 GO:GO:0070827
HOGENOM:HOG000175283 GeneTree:ENSGT00390000003100 CTD:6832
HOVERGEN:HBG108522 OrthoDB:EOG4SXNBZ GO:GO:0034458 GO:GO:0035946
GO:GO:0035945 EMBL:DAAA02061832 EMBL:BC149119 IPI:IPI00692690
RefSeq:NP_001095332.1 UniGene:Bt.27125 STRING:A6QP28
Ensembl:ENSBTAT00000001386 GeneID:505988 KEGG:bta:505988
InParanoid:A6QP28 OMA:XGVPCDL NextBio:20867398 Uniprot:A6QP28
Length = 535
Score = 576 (207.8 bits), Expect = 6.8e-56, P = 6.8e-56
Identities = 120/257 (46%), Positives = 174/257 (67%)
Query: 1 MADVVSDYDCAVIDEIQMLGCKTRGFSFTRALLGICANELHLCGDPAAVPLIQQILQVTG 60
M V + Y+ AVIDEIQM+ RG+++TRALLG+CA E+HLCG+ AA+ ++ +++ TG
Sbjct: 279 MCSVTTPYEVAVIDEIQMIKDPARGWAWTRALLGLCAEEIHLCGESAAIDMVTELMYTTG 338
Query: 61 DDVKVQSYERLSPLVPLNVPLGSFSNIQTGDCIVTFSRHAIYRLKKAIESRGKHLCSIVY 120
+DV+V++Y+RL+P+ L+ L S N++ GDCIV FS++ IY + + IE RG +++Y
Sbjct: 339 EDVEVRTYKRLTPISVLDHALESLDNLRPGDCIVCFSKNDIYSVSRQIEIRGLE-SAVIY 397
Query: 121 GSLPPETRTRQATRFNDASSEFDVLVASDAIGMGLNLNISRIIF-STMKKF---DGV-EL 175
GSLPP T+ QA +FND +LVA+DAIGMGLNL+I RIIF S MK G E+
Sbjct: 398 GSLPPGTKLAQAKKFNDPDDPCKILVATDAIGMGLNLSIRRIIFYSLMKPSINEKGEKEI 457
Query: 176 RDLTVPEVKQIAGRAGRYGSKFPVGEVTCLDSEDLPLLHKSLLEPSPMLESAGLFPNFDL 235
+T + QIAGRAGR+ SKF GEVT ++ EDL LL + L P +++AGL P +
Sbjct: 458 EPITTSQALQIAGRAGRFSSKFKEGEVTTMNREDLSLLKEILNRPVDPIKAAGLHPTAEQ 517
Query: 236 IYMYSRLHPDSSLYGIL 252
I M++ PD++L ++
Sbjct: 518 IEMFAYHLPDTTLSNLI 534
>CGD|CAL0002663 [details] [associations]
symbol:SUV3 species:5476 "Candida albicans" [GO:0009060
"aerobic respiration" evidence=IMP] [GO:0001410 "chlamydospore
formation" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0045025
"mitochondrial degradosome" evidence=IEA] [GO:0000262
"mitochondrial chromosome" evidence=IEA] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0071216 "cellular response to biotic
stimulus" evidence=IMP] [GO:0071467 "cellular response to pH"
evidence=IMP] [GO:0036177 "filamentous growth of a population of
unicellular organisms in response to pH" evidence=IMP] [GO:0006264
"mitochondrial DNA replication" evidence=IEA] [GO:0000957
"mitochondrial RNA catabolic process" evidence=IEA] [GO:0000372
"Group I intron splicing" evidence=IEA] [GO:0000965 "mitochondrial
RNA 3'-end processing" evidence=IEA] [GO:0044011 "single-species
biofilm formation on inanimate substrate" evidence=IMP] [GO:0036180
"filamentous growth of a population of unicellular organisms in
response to biotic stimulus" evidence=IMP] [GO:0036187 "cell growth
mode switching, budding to filamentous" evidence=IMP] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IEA] [GO:0008859
"exoribonuclease II activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR022192 Pfam:PF00271 Pfam:PF12513 PROSITE:PS51194
SMART:SM00490 CGD:CAL0002663 GO:GO:0005524 GO:GO:0071216
GO:GO:0001410 GO:GO:0036180 GO:GO:0003676 GO:GO:0035690
GO:GO:0004386 GO:GO:0009060 GO:GO:0044011 InterPro:IPR014001
SMART:SM00487 GO:GO:0071467 GO:GO:0036177 GO:GO:0036187
eggNOG:COG0513 EMBL:AACQ01000142 EMBL:AACQ01000141
RefSeq:XP_712911.1 RefSeq:XP_712944.1 ProteinModelPortal:Q59TB2
STRING:Q59TB2 GeneID:3645451 GeneID:3645490 KEGG:cal:CaO19.11994
KEGG:cal:CaO19.4519 Uniprot:Q59TB2
Length = 720
Score = 515 (186.3 bits), Expect = 5.4e-55, Sum P(2) = 5.4e-55
Identities = 110/277 (39%), Positives = 175/277 (63%)
Query: 9 DCAVIDEIQMLGCKTRGFSFTRALLGICANELHLCGDPAAVPLIQQILQVTGDDVKVQSY 68
D VIDEIQM+ RG +T A+LG+ A+E+HLCG+ +AVP IQ+++++TGD+++++ +
Sbjct: 301 DLCVIDEIQMIADPLRGSVWTNAVLGVLAHEIHLCGEESAVPFIQKMVEITGDELEIKKF 360
Query: 69 ERLSPLVPLNVPLGSFSNIQTGDCIVTFSRHAIYRLKKAIESRGKHLCSIVYGSLPPETR 128
RL L + S ++ GDC+V FS+ I + K IE + ++YG+LPPE R
Sbjct: 361 NRLGKLT-VEKSNTSLQQLKKGDCLVVFSKKKILKFKCDIERNTRLKVGVIYGALPPEIR 419
Query: 129 TRQATRFNDASSEFDVLVASDAIGMGLNLNISRIIFSTMKKFDGVELRDLTVPEVKQIAG 188
+++A++FN+ E+DVLVASDAIGMGLNL I+RI+FS + KF+G + L+V +VKQIAG
Sbjct: 420 SQEASKFNNG--EYDVLVASDAIGMGLNLKINRIVFSGVNKFNGSTVEKLSVSQVKQIAG 477
Query: 189 RAGRYGSKF--PVGEVTCLDSEDLPLLHKSLLEPSPMLESAGLFPNFDLIYMYSRLHP-D 245
RAGR+ ++ G VT L L + + L P + A ++P ++ Y P
Sbjct: 478 RAGRFSAQHGSKEGFVTALHRSSLVYIDQCLKTPVSEISKACIWPTSNIWRQYMANDPRK 537
Query: 246 SSLYGILEHFLENA-KL-SENYFFANCEEVLKVATVI 280
SSL + E+FL N K S+N+F + ++ +++ ++
Sbjct: 538 SSLSSVYENFLTNVLKFQSDNFFISELDQKVQLLNLV 574
Score = 70 (29.7 bits), Expect = 5.4e-55, Sum P(2) = 5.4e-55
Identities = 15/44 (34%), Positives = 26/44 (59%)
Query: 344 ELESIHKVLDLYVWLSFRLEESFPDRELAASQKAICSMLIEEFL 387
+LE +H+++ L++WLS R F D++ A KA+ I + L
Sbjct: 656 KLEDMHRLVLLFLWLSQRFPTLFIDKDSAMEVKALVEKRINQEL 699
>UNIPROTKB|Q59TB2 [details] [associations]
symbol:SUV3 "Putative uncharacterized protein SUV3"
species:237561 "Candida albicans SC5314" [GO:0001410 "chlamydospore
formation" evidence=IMP] [GO:0009060 "aerobic respiration"
evidence=IMP] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0035690 "cellular response to drug" evidence=IMP] [GO:0036177
"filamentous growth of a population of unicellular organisms in
response to pH" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0036187 "cell growth mode switching, budding to
filamentous" evidence=IMP] [GO:0044011 "single-species biofilm
formation on inanimate substrate" evidence=IMP] [GO:0044182
"filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] [GO:0071467 "cellular response to pH" evidence=IMP]
InterPro:IPR001650 InterPro:IPR022192 Pfam:PF00271 Pfam:PF12513
PROSITE:PS51194 SMART:SM00490 CGD:CAL0002663 GO:GO:0005524
GO:GO:0071216 GO:GO:0001410 GO:GO:0036180 GO:GO:0003676
GO:GO:0035690 GO:GO:0004386 GO:GO:0009060 GO:GO:0044011
InterPro:IPR014001 SMART:SM00487 GO:GO:0071467 GO:GO:0036177
GO:GO:0036187 eggNOG:COG0513 EMBL:AACQ01000142 EMBL:AACQ01000141
RefSeq:XP_712911.1 RefSeq:XP_712944.1 ProteinModelPortal:Q59TB2
STRING:Q59TB2 GeneID:3645451 GeneID:3645490 KEGG:cal:CaO19.11994
KEGG:cal:CaO19.4519 Uniprot:Q59TB2
Length = 720
Score = 515 (186.3 bits), Expect = 5.4e-55, Sum P(2) = 5.4e-55
Identities = 110/277 (39%), Positives = 175/277 (63%)
Query: 9 DCAVIDEIQMLGCKTRGFSFTRALLGICANELHLCGDPAAVPLIQQILQVTGDDVKVQSY 68
D VIDEIQM+ RG +T A+LG+ A+E+HLCG+ +AVP IQ+++++TGD+++++ +
Sbjct: 301 DLCVIDEIQMIADPLRGSVWTNAVLGVLAHEIHLCGEESAVPFIQKMVEITGDELEIKKF 360
Query: 69 ERLSPLVPLNVPLGSFSNIQTGDCIVTFSRHAIYRLKKAIESRGKHLCSIVYGSLPPETR 128
RL L + S ++ GDC+V FS+ I + K IE + ++YG+LPPE R
Sbjct: 361 NRLGKLT-VEKSNTSLQQLKKGDCLVVFSKKKILKFKCDIERNTRLKVGVIYGALPPEIR 419
Query: 129 TRQATRFNDASSEFDVLVASDAIGMGLNLNISRIIFSTMKKFDGVELRDLTVPEVKQIAG 188
+++A++FN+ E+DVLVASDAIGMGLNL I+RI+FS + KF+G + L+V +VKQIAG
Sbjct: 420 SQEASKFNNG--EYDVLVASDAIGMGLNLKINRIVFSGVNKFNGSTVEKLSVSQVKQIAG 477
Query: 189 RAGRYGSKF--PVGEVTCLDSEDLPLLHKSLLEPSPMLESAGLFPNFDLIYMYSRLHP-D 245
RAGR+ ++ G VT L L + + L P + A ++P ++ Y P
Sbjct: 478 RAGRFSAQHGSKEGFVTALHRSSLVYIDQCLKTPVSEISKACIWPTSNIWRQYMANDPRK 537
Query: 246 SSLYGILEHFLENA-KL-SENYFFANCEEVLKVATVI 280
SSL + E+FL N K S+N+F + ++ +++ ++
Sbjct: 538 SSLSSVYENFLTNVLKFQSDNFFISELDQKVQLLNLV 574
Score = 70 (29.7 bits), Expect = 5.4e-55, Sum P(2) = 5.4e-55
Identities = 15/44 (34%), Positives = 26/44 (59%)
Query: 344 ELESIHKVLDLYVWLSFRLEESFPDRELAASQKAICSMLIEEFL 387
+LE +H+++ L++WLS R F D++ A KA+ I + L
Sbjct: 656 KLEDMHRLVLLFLWLSQRFPTLFIDKDSAMEVKALVEKRINQEL 699
>ASPGD|ASPL0000071675 [details] [associations]
symbol:AN4723 species:162425 "Emericella nidulans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0045025 "mitochondrial degradosome"
evidence=IEA] [GO:0000262 "mitochondrial chromosome" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0008859 "exoribonuclease II activity" evidence=IEA] [GO:0006264
"mitochondrial DNA replication" evidence=IEA] [GO:0000957
"mitochondrial RNA catabolic process" evidence=IEA] [GO:0000372
"Group I intron splicing" evidence=IEA] [GO:0000965 "mitochondrial
RNA 3'-end processing" evidence=IEA] InterPro:IPR001650
InterPro:IPR022192 Pfam:PF00271 Pfam:PF12513 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
EMBL:BN001303 HOGENOM:HOG000175283 EnsemblFungi:CADANIAT00005706
OMA:CALITGE Uniprot:C8VAV2
Length = 832
Score = 569 (205.4 bits), Expect = 6.7e-55, P = 6.7e-55
Identities = 132/321 (41%), Positives = 196/321 (61%)
Query: 1 MADVVSDYDCAVIDEIQMLGCKTRGFSFTRALLGICANELHLCGDPAAVPLIQQILQVTG 60
M ++ Y+ VIDEIQM+ RG+++TRALLG A ELHLCG+ VPLI+Q+ + G
Sbjct: 261 MVNLGQTYEVGVIDEIQMIADPRRGWAWTRALLGAKATELHLCGETRVVPLIRQLAALAG 320
Query: 61 DDVKVQSYERLSPLVPLNVPL-GSFSNIQTGDCIVTFSRHAIYRLKKAIESRGKHLCSIV 119
D + + YERL+PL +N L G +++Q GDCIV+FSR I+ LK IE + +I+
Sbjct: 321 DKLVIHRYERLNPLKAMNKSLKGDLTSLQKGDCIVSFSRVGIHALKADIERKTGRRAAII 380
Query: 120 YGSLPPETRTRQATRFNDASSEFDVLVASDAIGMGLNLNISRIIFSTMKKFDGVELRDLT 179
YG LP E RT+QA+ FND ++++D LVASDAIGMGLNL+ RIIF T+ K L+ LT
Sbjct: 381 YGGLPAEIRTQQASLFNDPNNDYDFLVASDAIGMGLNLSCRRIIFETVVKTLPSGLKRLT 440
Query: 180 VPEVKQIAGRAGRYGSKFP-------------VGEVTCLDSEDLPLLHKSLLEPSPMLES 226
VPE+KQI GRAGRY S VG VT L+ DLP + ++L P + +
Sbjct: 441 VPEIKQIGGRAGRYRSAAQHGKDHQQDNDNDNVGYVTSLEEVDLPYIQEALNTEPPPISA 500
Query: 227 AGLFPNFDLIY-MYSRLHP-DSSLYGILEHFLENAKLSENYFFANCEEVLKVATVIDQLP 284
AG+ P D +Y ++ P ++SL +++ E A+++ +F + L+ A +ID +P
Sbjct: 501 AGINPP-DSVYEKFAAYFPSNASLAYMVKRLTEIARINNLFFMCDPSPNLENAEIIDAVP 559
Query: 285 -LRLHEKYLFCISPVDMNDDI 304
L ++ F +P++ +++
Sbjct: 560 GLHFVDQLTFMAAPMNPREEL 580
Score = 168 (64.2 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 52/199 (26%), Positives = 101/199 (50%)
Query: 199 VGEVTCLDSEDLPLLHKSLLEPSPMLESAGLFPNFDLIY-MYSRLHP-DSSLYGILEHFL 256
VG VT L+ DLP + ++L P + +AG+ P D +Y ++ P ++SL +++
Sbjct: 473 VGYVTSLEEVDLPYIQEALNTEPPPISAAGINPP-DSVYEKFAAYFPSNASLAYMVKRLT 531
Query: 257 ENAKLSENYFFANCEEVLKVATVIDQLP-LRLHEKYLFCISPVDMNDDISSQGLTQF--- 312
E A+++ +F + L+ A +ID +P L ++ F +P++ +++ + F
Sbjct: 532 EIARINNLFFMCDPSPNLENAEIIDAVPGLHFVDQLTFMAAPMNPREELGRRVAMAFERC 591
Query: 313 ATNYSKKGIVQLREIFTPGTLQVPKT--QAALRELESIHKVLDLYVWLSFRLEESFPDRE 370
++ ++ + E+ L+ P + + + +LE +H+ + LY WLS+R F DR
Sbjct: 592 VLEHTNGRLLDIEEVNLE-ILEEPVSGNKEYMHKLEGLHRSVILYTWLSYRFGGIFTDRT 650
Query: 371 LAASQKAICSMLIEEFLER 389
LA K L+EE + R
Sbjct: 651 LAVHVKE----LVEERMVR 665
>GENEDB_PFALCIPARUM|PFF1140c [details] [associations]
symbol:PFF1140c "ATP-dependent DEAD box
helicase, putative" species:5833 "Plasmodium falciparum"
[GO:0016070 "RNA metabolic process" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR022192 Pfam:PF00271 Pfam:PF12513
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0016070 GO:GO:0004004 EMBL:AL844505 RefSeq:XP_966219.1
ProteinModelPortal:C6KT73 PRIDE:C6KT73
EnsemblProtists:PFF1140c:mRNA GeneID:3885873 KEGG:pfa:PFF1140c
EuPathDB:PlasmoDB:PF3D7_0623700 HOGENOM:HOG000281593 Uniprot:C6KT73
Length = 1137
Score = 267 (99.0 bits), Expect = 1.3e-42, Sum P(4) = 1.3e-42
Identities = 49/137 (35%), Positives = 87/137 (63%)
Query: 1 MADVVSDYDCAVIDEIQMLGCKTRGFSFTRALLGICANELHLCGDPAAVPLIQQILQVTG 60
M + +YDCA++DEIQM+ ++RG ++T L+ + + +++LCG + LI+ + +
Sbjct: 418 MTPLNKEYDCAIVDEIQMINNESRGHAWTNVLMNLNSKDIYLCGSEYIIDLIKNLADILN 477
Query: 61 DDVKVQSYERLSPLVPLNVPLGSFSNIQTGDCIVTFSRHAIYRLKKAIESRGKHLCSIVY 120
D + ++ +ERL L L + ++QTGDCI+TFSR+ I LK+ +E K + ++Y
Sbjct: 478 DKLIIKKFERLGSL-HLQEYNTTLEDVQTGDCIITFSRNNIMLLKRILEKYNKRVF-VIY 535
Query: 121 GSLPPETRTRQATRFND 137
GSLPP+++ +Q FN+
Sbjct: 536 GSLPPDSKKKQINMFNE 552
Score = 182 (69.1 bits), Expect = 1.3e-42, Sum P(4) = 1.3e-42
Identities = 37/73 (50%), Positives = 53/73 (72%)
Query: 144 VLVASDAIGMGLNLNISRIIFSTMKKFDGVELRDLTVPEVKQIAGRAGRYG---SKFPVG 200
+L+A+D IGMGLN+NI RIIF ++KK+DG LR LT+ E QIAGRAGR+ + +G
Sbjct: 642 ILIATDVIGMGLNINIKRIIFYSLKKYDGDILRYLTMSEFLQIAGRAGRFNPSCTNKSIG 701
Query: 201 EVTCLDSEDLPLL 213
+TC+ +D+ +L
Sbjct: 702 YITCVHLDDINIL 714
Score = 88 (36.0 bits), Expect = 1.3e-42, Sum P(4) = 1.3e-42
Identities = 23/103 (22%), Positives = 50/103 (48%)
Query: 227 AGLFPNFDLIYMYSRL-----HPDSSLYGILEHFLENAKLSENYFFA--NCEEVLKVATV 279
AG FPN+ ++ + + L+ IL+ +E KL++ YFF N ++ +
Sbjct: 838 AGFFPNYHIVEELRKTLEYEYNSKIKLHDILKVLVEYVKLNDEYFFLTKNYNNMITITKE 897
Query: 280 IDQLPLRLHEKYLFCISPVDMNDDISSQGLTQFATNYSKKGIV 322
++ + L + + + + P+++N+ + L F ++S G V
Sbjct: 898 LEHINLEQNIIFTYSLCPININNIVLLNTLKTFCMSHSILGYV 940
Score = 60 (26.2 bits), Expect = 1.3e-42, Sum P(4) = 1.3e-42
Identities = 12/43 (27%), Positives = 24/43 (55%)
Query: 345 LESIHKVLDLYVWLSFRLEESFPDRELAASQKAICSMLIEEFL 387
LE ++++D+Y WL + + + + L +++K SM I L
Sbjct: 1084 LEIYYEIMDMYCWLYTKFPDVYKNINLVSNEKKKVSMKIIHML 1126
>UNIPROTKB|C6KT73 [details] [associations]
symbol:PFF1140c "ATP dependent DEAD-box helicase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR022192 Pfam:PF00271 Pfam:PF12513 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0016070
GO:GO:0004004 EMBL:AL844505 RefSeq:XP_966219.1
ProteinModelPortal:C6KT73 PRIDE:C6KT73
EnsemblProtists:PFF1140c:mRNA GeneID:3885873 KEGG:pfa:PFF1140c
EuPathDB:PlasmoDB:PF3D7_0623700 HOGENOM:HOG000281593 Uniprot:C6KT73
Length = 1137
Score = 267 (99.0 bits), Expect = 1.3e-42, Sum P(4) = 1.3e-42
Identities = 49/137 (35%), Positives = 87/137 (63%)
Query: 1 MADVVSDYDCAVIDEIQMLGCKTRGFSFTRALLGICANELHLCGDPAAVPLIQQILQVTG 60
M + +YDCA++DEIQM+ ++RG ++T L+ + + +++LCG + LI+ + +
Sbjct: 418 MTPLNKEYDCAIVDEIQMINNESRGHAWTNVLMNLNSKDIYLCGSEYIIDLIKNLADILN 477
Query: 61 DDVKVQSYERLSPLVPLNVPLGSFSNIQTGDCIVTFSRHAIYRLKKAIESRGKHLCSIVY 120
D + ++ +ERL L L + ++QTGDCI+TFSR+ I LK+ +E K + ++Y
Sbjct: 478 DKLIIKKFERLGSL-HLQEYNTTLEDVQTGDCIITFSRNNIMLLKRILEKYNKRVF-VIY 535
Query: 121 GSLPPETRTRQATRFND 137
GSLPP+++ +Q FN+
Sbjct: 536 GSLPPDSKKKQINMFNE 552
Score = 182 (69.1 bits), Expect = 1.3e-42, Sum P(4) = 1.3e-42
Identities = 37/73 (50%), Positives = 53/73 (72%)
Query: 144 VLVASDAIGMGLNLNISRIIFSTMKKFDGVELRDLTVPEVKQIAGRAGRYG---SKFPVG 200
+L+A+D IGMGLN+NI RIIF ++KK+DG LR LT+ E QIAGRAGR+ + +G
Sbjct: 642 ILIATDVIGMGLNINIKRIIFYSLKKYDGDILRYLTMSEFLQIAGRAGRFNPSCTNKSIG 701
Query: 201 EVTCLDSEDLPLL 213
+TC+ +D+ +L
Sbjct: 702 YITCVHLDDINIL 714
Score = 88 (36.0 bits), Expect = 1.3e-42, Sum P(4) = 1.3e-42
Identities = 23/103 (22%), Positives = 50/103 (48%)
Query: 227 AGLFPNFDLIYMYSRL-----HPDSSLYGILEHFLENAKLSENYFFA--NCEEVLKVATV 279
AG FPN+ ++ + + L+ IL+ +E KL++ YFF N ++ +
Sbjct: 838 AGFFPNYHIVEELRKTLEYEYNSKIKLHDILKVLVEYVKLNDEYFFLTKNYNNMITITKE 897
Query: 280 IDQLPLRLHEKYLFCISPVDMNDDISSQGLTQFATNYSKKGIV 322
++ + L + + + + P+++N+ + L F ++S G V
Sbjct: 898 LEHINLEQNIIFTYSLCPININNIVLLNTLKTFCMSHSILGYV 940
Score = 60 (26.2 bits), Expect = 1.3e-42, Sum P(4) = 1.3e-42
Identities = 12/43 (27%), Positives = 24/43 (55%)
Query: 345 LESIHKVLDLYVWLSFRLEESFPDRELAASQKAICSMLIEEFL 387
LE ++++D+Y WL + + + + L +++K SM I L
Sbjct: 1084 LEIYYEIMDMYCWLYTKFPDVYKNINLVSNEKKKVSMKIIHML 1126
>UNIPROTKB|B1AR60 [details] [associations]
symbol:SUPV3L1 "ATP-dependent RNA helicase SUPV3L1,
mitochondrial" species:9606 "Homo sapiens" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 Pfam:PF00271 PROSITE:PS51194 GO:GO:0005524
GO:GO:0003676 GO:GO:0004386 EMBL:AL596223 UniGene:Hs.106469
HGNC:HGNC:11471 IPI:IPI00478485 SMR:B1AR60 Ensembl:ENST00000422378
Uniprot:B1AR60
Length = 263
Score = 431 (156.8 bits), Expect = 1.6e-40, P = 1.6e-40
Identities = 82/161 (50%), Positives = 120/161 (74%)
Query: 9 DCAVIDEIQMLGCKTRGFSFTRALLGICANELHLCGDPAAVPLIQQILQVTGDDVKVQSY 68
+ AVIDEIQM+ RG+++TRALLG+CA E+HLCG+PAA+ L+ +++ TG++V+V+ Y
Sbjct: 92 EVAVIDEIQMIRDPARGWAWTRALLGLCAEEVHLCGEPAAIDLVMELMYTTGEEVEVRDY 151
Query: 69 ERLSPLVPLNVPLGSFSNIQTGDCIVTFSRHAIYRLKKAIESRGKHLCSIVYGSLPPETR 128
+RL+P+ L+ L S N++ GDCIV FS++ IY + + IE RG +++YGSLPP T+
Sbjct: 152 KRLTPISVLDHALESLDNLRPGDCIVCFSKNDIYSVSRQIEIRGLE-SAVIYGSLPPGTK 210
Query: 129 TRQATRFNDASSEFDVLVASDAIGMGLNLNISRIIFSTMKK 169
QA +FND + +LVA+DAIGMGLNL+I RIIF ++ K
Sbjct: 211 LAQAKKFNDPNDPCKILVATDAIGMGLNLSIRRIIFYSLIK 251
>TIGR_CMR|SPO_1417 [details] [associations]
symbol:SPO_1417 "helicase, putative" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0004386 "helicase activity"
evidence=ISS] [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=ISS] InterPro:IPR001650 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0003676 GO:GO:0004386
RefSeq:YP_166658.1 ProteinModelPortal:Q5LTJ7 GeneID:3192722
KEGG:sil:SPO1417 PATRIC:23376149 HOGENOM:HOG000141658 OMA:IAQIRTW
ProtClustDB:CLSK2767239 Uniprot:Q5LTJ7
Length = 959
Score = 240 (89.5 bits), Expect = 7.0e-17, Sum P(2) = 7.0e-17
Identities = 77/205 (37%), Positives = 100/205 (48%)
Query: 9 DCAVIDEIQMLGCKTRGFSFTRALLGICANELH---LCG-DPAAVPLIQQILQVTGDDVK 64
DC +DEIQ+ RG FT LL A LH L G D P+ + + +
Sbjct: 89 DCVAVDEIQLCADPERGHVFTDRLLR--ARGLHETLLLGSDTMRGPIAALV-----PEAQ 141
Query: 65 VQSYERLSPLVPLNVPLGSFSNIQTGDCIVTFSRHAIYRLKKAIESRGKHLCSIVYGSLP 124
ER+S LV + + IV FS +Y + + I R K ++V G+L
Sbjct: 142 FVRRERMSQLVYTGSK--KITRMPPRSAIVGFSVENVYAIAELIR-RQKGGAAVVMGALS 198
Query: 125 PETRTRQATRFNDASSEFDVLVASDAIGMGLNLNISRIIFSTMKKFDGVELRDLTVPEVK 184
P TR Q + + E D LVA+DAIGMGLNL+I + FS + KFDG +R L E+
Sbjct: 199 PRTRNAQVDLYQNG--EVDYLVATDAIGMGLNLDIDHVAFSALSKFDGRRMRPLAPNELA 256
Query: 185 QIAGRAGR--YGSKFPV-GEVTCLD 206
QIAGRAGR F V GE LD
Sbjct: 257 QIAGRAGRGMASGTFGVTGEARPLD 281
Score = 41 (19.5 bits), Expect = 7.0e-17, Sum P(2) = 7.0e-17
Identities = 20/89 (22%), Positives = 43/89 (48%)
Query: 319 KGIVQLREIFTPGTLQVPKTQAALRELESI--HKV-------LDLYVWLS--FRLEESFP 367
KG+ + E PG + VP + A ++++ +++ +D+ L+ R ++S
Sbjct: 695 KGLSEFPEAPPPGLVTVPSVKDAEPGVDTMCGYRISGERAIRIDMLERLADMLRAKDSRS 754
Query: 368 DRELAASQKAICSMLIEEF---LERLGWQ 393
E A +I M +E+F ++ LG++
Sbjct: 755 GFEATADMLSITGMTLEQFADLMQGLGYK 783
>UNIPROTKB|F5H6Y7 [details] [associations]
symbol:SKIV2L "Helicase SKI2W" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0004386 EMBL:AL844853 EMBL:AL662849 EMBL:BX005143
EMBL:CR759782 EMBL:CR753822 EMBL:CR753845 InterPro:IPR025696
Pfam:PF13234 HGNC:HGNC:10898 ChiTaRS:SKIV2L IPI:IPI00946735
SMR:F5H6Y7 Ensembl:ENST00000547025 Ensembl:ENST00000547224
Ensembl:ENST00000547296 Ensembl:ENST00000548561
Ensembl:ENST00000552010 Uniprot:F5H6Y7
Length = 880
Score = 127 (49.8 bits), Expect = 0.00012, P = 0.00012
Identities = 32/86 (37%), Positives = 46/86 (53%)
Query: 144 VLVASDAIGMGLNLNISRIIFSTMKKFDGVELRDLTVPEVKQIAGRAGRYGSKFPVGEVT 203
VL A++ MG+N+ ++F +M+K DG RDL E Q+AGRAGR G P G V
Sbjct: 292 VLFATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLD-PTGTVI 350
Query: 204 CLDSEDLPL---LHKSLLEPSPMLES 226
L +P LH+ ++ L+S
Sbjct: 351 LLCKGRVPEMADLHRMMMGKPSQLQS 376
>FB|FBgn0039117 [details] [associations]
symbol:tst "twister" species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=IMP] [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381
eggNOG:COG4581 InterPro:IPR025696 Pfam:PF13234 EMBL:AJ276896
ProteinModelPortal:Q9BI21 SMR:Q9BI21 STRING:Q9BI21 PaxDb:Q9BI21
PRIDE:Q9BI21 FlyBase:FBgn0039117 InParanoid:Q9BI21
OrthoDB:EOG46HDRK ArrayExpress:Q9BI21 Bgee:Q9BI21 Uniprot:Q9BI21
Length = 1197
Score = 120 (47.3 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 23/51 (45%), Positives = 35/51 (68%)
Query: 144 VLVASDAIGMGLNLNISRIIFSTMKKFDGVELRDLTVPEVKQIAGRAGRYG 194
+L A++ MG+N+ ++F + KKFDG+E+R+L E Q+AGRAGR G
Sbjct: 608 LLFATETFAMGVNMPARTVVFDSCKKFDGLEMRNLKPGEYIQMAGRAGRRG 658
Score = 55 (24.4 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 28/114 (24%), Positives = 51/114 (44%)
Query: 2 ADVVSDYDCAVIDEIQMLGCKTRGFSFTRALLGICANELHLCGDPAAVPLIQQILQVTGD 61
+DV D + + DE+ + RG + ++ + +++ A VP ++ G
Sbjct: 363 SDVTRDLEWVIFDEVHYINNPERGHVWEEVII-LLPEHVNIIMLSATVPNTLELADWVGS 421
Query: 62 DVKVQSYERLSPLVPLNVPLGSFSNIQTGDCIVTFSRHAIYRLKKAIESRGKHL 115
K + Y +S L VPL F + TG SR I+ L ++++GK+L
Sbjct: 422 TKKRKVYV-ISTL-KRPVPLTHF--LYTG--AGGKSRDDIFLL---VDAQGKYL 466
>ASPGD|ASPL0000004985 [details] [associations]
symbol:AN6007 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:BN001301 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACD01000102 GO:GO:0008026 eggNOG:COG4581
HOGENOM:HOG000163048 KO:K12599 OMA:TRLDETC OrthoDB:EOG4WM82R
RefSeq:XP_663611.1 ProteinModelPortal:Q5B0C3 STRING:Q5B0C3
EnsemblFungi:CADANIAT00007011 GeneID:2871132 KEGG:ani:AN6007.2
Uniprot:Q5B0C3
Length = 1293
Score = 128 (50.1 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 53/165 (32%), Positives = 79/165 (47%)
Query: 101 IYRLKKAIESRGKHLCSIVYGSLPPETRTRQATRFNDASSEFDVLVASDAIGMGLNLNIS 160
I RL++ + SRG ++ +G L P + F A + VL A++ MGLNL
Sbjct: 682 ILRLRELL-SRG---IAVHHGGLLPIMKEIVEILF--AKTLVKVLFATETFAMGLNLPTR 735
Query: 161 RIIFSTMKKFDGVELRDLTVPEVKQIAGRAGRYGSKFPVGEVTCLDS--EDLP---LLHK 215
++FS +K DG RDL E Q+AGRAGR G VG V ++S ++ P L K
Sbjct: 736 TVVFSGFRKHDGKGFRDLLPGEYTQMAGRAGRRGLD-NVGYVIVVNSGKDEAPPAGALRK 794
Query: 216 SLL-EPSPMLESAGLFPNFDLIYMYSRLHPDSSLYGILEHFLENA 259
+L +P+ + L +++I R+ I F ENA
Sbjct: 795 MILGDPTKLRSQFRL--TYNMILNLLRVEALKIEEMIKRSFSENA 837
Score = 47 (21.6 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 15/67 (22%), Positives = 27/67 (40%)
Query: 2 ADVVSDYDCAVIDEIQMLGCKTRGFSFTRALLGICANELHLCGDPAAVPLIQQILQVTGD 61
AD++ D + + DE+ + RG + ++ + + L A VP Q+ G
Sbjct: 423 ADLIRDVEFVIFDEVHYVNDLERGVVWEEVII-MLPEHVTLILLSATVPNTQEFASWVGR 481
Query: 62 DVKVQSY 68
K Y
Sbjct: 482 TKKKDIY 488
>CGD|CAL0002171 [details] [associations]
symbol:orf19.6425 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0055087 "Ski complex" evidence=IEA]
[GO:0070478 "nuclear-transcribed mRNA catabolic process, 3'-5'
exonucleolytic nonsense-mediated decay" evidence=IEA] [GO:0070481
"nuclear-transcribed mRNA catabolic process, non-stop decay"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
CGD:CAL0002171 GO:GO:0005524 GO:GO:0003676 EMBL:AACQ01000073
EMBL:AACQ01000072 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG4581 KO:K12599 RefSeq:XP_716180.1
RefSeq:XP_716263.1 ProteinModelPortal:Q5A337 STRING:Q5A337
GeneID:3642143 GeneID:3642220 KEGG:cal:CaO19.13783
KEGG:cal:CaO19.6425 Uniprot:Q5A337
Length = 1245
Score = 126 (49.4 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 47/160 (29%), Positives = 77/160 (48%)
Query: 103 RLKKAIESRGKHLCSIVYGSLPPETRTRQATRFNDASSEFDVLVASDAIGMGLNLNISRI 162
++ K E G+ + ++ +G L P + F A S VL A++ MGLNL +
Sbjct: 633 QILKIREMLGRGI-AVHHGGLLPIVKECIEILF--AKSLVKVLFATETFAMGLNLPTRTV 689
Query: 163 IFSTMKKFDGVELRDLTVPEVKQIAGRAGRYGSKFPVGEVTCLDSED--LPLLHKSLLEP 220
IFS+M+K DG R+L E Q++GRAGR G G V + +D P K ++
Sbjct: 690 IFSSMRKHDGRSFRNLLPGEFTQMSGRAGRRGLD-KTGTVIVMAYDDPLSPTDFKEVVLG 748
Query: 221 SPMLESAGLFPNFDLIYMYSRLHPDSSLYGILEH-FLENA 259
+P S+ + +I R+ + +++H F EN+
Sbjct: 749 TPTKLSSQFRLTYSMILNLLRIEA-LKVEEMIKHSFSENS 787
Score = 48 (22.0 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 26/126 (20%), Positives = 51/126 (40%)
Query: 2 ADVVSDYDCAVIDEIQMLGCKTRGFSFTRALLGICANELHLCGDPAAVPLIQQILQVTGD 61
AD++ D + + DE+ + RG + ++ + + ++ A VP + G
Sbjct: 392 ADLIRDVEFVIFDEVHYVNDIDRGVVWEEVIIMLPDHVKYILLS-ATVPNTFEFANWVGR 450
Query: 62 DVKVQSYERLSPL--VPLNVPLGSFSNI-QTGDCIVTFSRHAIYRLKKAIESRGK--HLC 116
+ Y +P VPL + + + + + + D F + + K +E GK L
Sbjct: 451 TKQKDIYVISTPKRPVPLEIFVSAKNQLFKVVDANRRFQENEFRKHKDLLEGGGKKNELP 510
Query: 117 SIVYGS 122
S GS
Sbjct: 511 STTMGS 516
>UNIPROTKB|F5H7B0 [details] [associations]
symbol:SKIV2L "Helicase SKI2W" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL662849 EMBL:AL645922
InterPro:IPR025696 Pfam:PF13234 HGNC:HGNC:10898 ChiTaRS:SKIV2L
IPI:IPI01021910 SMR:F5H7B0 Ensembl:ENST00000544581
Ensembl:ENST00000546549 Uniprot:F5H7B0
Length = 1053
Score = 127 (49.8 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 32/86 (37%), Positives = 46/86 (53%)
Query: 144 VLVASDAIGMGLNLNISRIIFSTMKKFDGVELRDLTVPEVKQIAGRAGRYGSKFPVGEVT 203
VL A++ MG+N+ ++F +M+K DG RDL E Q+AGRAGR G P G V
Sbjct: 465 VLFATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLD-PTGTVI 523
Query: 204 CLDSEDLPL---LHKSLLEPSPMLES 226
L +P LH+ ++ L+S
Sbjct: 524 LLCKGRVPEMADLHRMMMGKPSQLQS 549
Score = 45 (20.9 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 25/121 (20%), Positives = 50/121 (41%)
Query: 2 ADVVSDYDCAVIDEIQMLGCKTRGFSFTRALLGICANELHLCGDPAAVPLIQQILQVTGD 61
+DV+ D + + DE+ + RG + L+ + + + + A VP + G
Sbjct: 218 SDVIRDLEWVIFDEVHYINDVERGVVWEEVLI-MLPDHVSIILLSATVPNALEFADWIGR 276
Query: 62 DVKVQSY--ERLSPLVPLNVPL--GSFSNIQTGDCIVTFSRHAIYRLK---KAIESRGKH 114
+ Q Y ++ VPL L G+ S Q G+ + + K A+E++ +
Sbjct: 277 LKRRQIYVISTVTRPVPLEHYLFTGNSSKTQ-GELFLLLDSRGAFHTKGYYAAVEAKKER 335
Query: 115 L 115
+
Sbjct: 336 M 336
>UNIPROTKB|F8VS23 [details] [associations]
symbol:SKIV2L "Helicase SKI2W" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL844853 EMBL:BX005143
EMBL:CR759782 EMBL:CR753822 EMBL:CR753845 InterPro:IPR025696
Pfam:PF13234 HGNC:HGNC:10898 ChiTaRS:SKIV2L IPI:IPI00945125
SMR:F8VS23 Ensembl:ENST00000546908 Ensembl:ENST00000552714
Ensembl:ENST00000552746 Ensembl:ENST00000553255 UCSC:uc011ghl.1
Uniprot:F8VS23
Length = 1053
Score = 127 (49.8 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 32/86 (37%), Positives = 46/86 (53%)
Query: 144 VLVASDAIGMGLNLNISRIIFSTMKKFDGVELRDLTVPEVKQIAGRAGRYGSKFPVGEVT 203
VL A++ MG+N+ ++F +M+K DG RDL E Q+AGRAGR G P G V
Sbjct: 465 VLFATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLD-PTGTVI 523
Query: 204 CLDSEDLPL---LHKSLLEPSPMLES 226
L +P LH+ ++ L+S
Sbjct: 524 LLCKGRVPEMADLHRMMMGKPSQLQS 549
Score = 45 (20.9 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 25/121 (20%), Positives = 50/121 (41%)
Query: 2 ADVVSDYDCAVIDEIQMLGCKTRGFSFTRALLGICANELHLCGDPAAVPLIQQILQVTGD 61
+DV+ D + + DE+ + RG + L+ + + + + A VP + G
Sbjct: 218 SDVIRDLEWVIFDEVHYINDVERGVVWEEVLI-MLPDHVSIILLSATVPNALEFADWIGR 276
Query: 62 DVKVQSY--ERLSPLVPLNVPL--GSFSNIQTGDCIVTFSRHAIYRLK---KAIESRGKH 114
+ Q Y ++ VPL L G+ S Q G+ + + K A+E++ +
Sbjct: 277 LKRRQIYVISTVTRPVPLEHYLFTGNSSKTQ-GELFLLLDSRGAFHTKGYYAAVEAKKER 335
Query: 115 L 115
+
Sbjct: 336 M 336
>UNIPROTKB|B4DM01 [details] [associations]
symbol:SKIV2L "cDNA FLJ57529, highly similar to Helicase
SKI2W (EC 3.6.1.-)" species:9606 "Homo sapiens" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL662849 eggNOG:COG4581
InterPro:IPR025696 Pfam:PF13234 UniGene:Hs.89864 HGNC:HGNC:10898
HOVERGEN:HBG060025 OrthoDB:EOG47H5P5 ChiTaRS:SKIV2L EMBL:AK297230
IPI:IPI01014021 SMR:B4DM01 STRING:B4DM01 Ensembl:ENST00000551164
Uniprot:B4DM01
Length = 1088
Score = 127 (49.8 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 32/86 (37%), Positives = 46/86 (53%)
Query: 144 VLVASDAIGMGLNLNISRIIFSTMKKFDGVELRDLTVPEVKQIAGRAGRYGSKFPVGEVT 203
VL A++ MG+N+ ++F +M+K DG RDL E Q+AGRAGR G P G V
Sbjct: 500 VLFATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLD-PTGTVI 558
Query: 204 CLDSEDLPL---LHKSLLEPSPMLES 226
L +P LH+ ++ L+S
Sbjct: 559 LLCKGRVPEMADLHRMMMGKPSQLQS 584
Score = 45 (20.9 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 25/121 (20%), Positives = 50/121 (41%)
Query: 2 ADVVSDYDCAVIDEIQMLGCKTRGFSFTRALLGICANELHLCGDPAAVPLIQQILQVTGD 61
+DV+ D + + DE+ + RG + L+ + + + + A VP + G
Sbjct: 253 SDVIRDLEWVIFDEVHYINDVERGVVWEEVLI-MLPDHVSIILLSATVPNALEFADWIGR 311
Query: 62 DVKVQSY--ERLSPLVPLNVPL--GSFSNIQTGDCIVTFSRHAIYRLK---KAIESRGKH 114
+ Q Y ++ VPL L G+ S Q G+ + + K A+E++ +
Sbjct: 312 LKRRQIYVISTVTRPVPLEHYLFTGNSSKTQ-GELFLLLDSRGAFHTKGYYAAVEAKKER 370
Query: 115 L 115
+
Sbjct: 371 M 371
>UNIPROTKB|F8VNU1 [details] [associations]
symbol:SKIV2L "Helicase SKI2W" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL844853 EMBL:BX005143
EMBL:CR759782 EMBL:CR753822 EMBL:CR753845 InterPro:IPR025696
Pfam:PF13234 HGNC:HGNC:10898 ChiTaRS:SKIV2L IPI:IPI01022196
SMR:F8VNU1 Ensembl:ENST00000546742 Ensembl:ENST00000547054
Ensembl:ENST00000550012 Ensembl:ENST00000550640 UCSC:uc011ghk.1
Uniprot:F8VNU1
Length = 1088
Score = 127 (49.8 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 32/86 (37%), Positives = 46/86 (53%)
Query: 144 VLVASDAIGMGLNLNISRIIFSTMKKFDGVELRDLTVPEVKQIAGRAGRYGSKFPVGEVT 203
VL A++ MG+N+ ++F +M+K DG RDL E Q+AGRAGR G P G V
Sbjct: 500 VLFATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLD-PTGTVI 558
Query: 204 CLDSEDLPL---LHKSLLEPSPMLES 226
L +P LH+ ++ L+S
Sbjct: 559 LLCKGRVPEMADLHRMMMGKPSQLQS 584
Score = 45 (20.9 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 25/121 (20%), Positives = 50/121 (41%)
Query: 2 ADVVSDYDCAVIDEIQMLGCKTRGFSFTRALLGICANELHLCGDPAAVPLIQQILQVTGD 61
+DV+ D + + DE+ + RG + L+ + + + + A VP + G
Sbjct: 253 SDVIRDLEWVIFDEVHYINDVERGVVWEEVLI-MLPDHVSIILLSATVPNALEFADWIGR 311
Query: 62 DVKVQSY--ERLSPLVPLNVPL--GSFSNIQTGDCIVTFSRHAIYRLK---KAIESRGKH 114
+ Q Y ++ VPL L G+ S Q G+ + + K A+E++ +
Sbjct: 312 LKRRQIYVISTVTRPVPLEHYLFTGNSSKTQ-GELFLLLDSRGAFHTKGYYAAVEAKKER 370
Query: 115 L 115
+
Sbjct: 371 M 371
>UNIPROTKB|F1LP39 [details] [associations]
symbol:Skiv2l "Protein Skiv2l" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 RGD:1303059 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR025696 Pfam:PF13234 GO:GO:0055087
OMA:TRLDETC GeneTree:ENSGT00690000102154 IPI:IPI00417365
Ensembl:ENSRNOT00000000481 Uniprot:F1LP39
Length = 1206
Score = 127 (49.8 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 32/86 (37%), Positives = 46/86 (53%)
Query: 144 VLVASDAIGMGLNLNISRIIFSTMKKFDGVELRDLTVPEVKQIAGRAGRYGSKFPVGEVT 203
VL A++ MG+N+ ++F +M+K DG RDL E Q+AGRAGR G P G V
Sbjct: 617 VLFATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLD-PTGTVI 675
Query: 204 CLDSEDLPL---LHKSLLEPSPMLES 226
L +P LH+ ++ L+S
Sbjct: 676 LLCKGRVPEMADLHRMMMGKPSQLQS 701
Score = 45 (20.9 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 8/32 (25%), Positives = 16/32 (50%)
Query: 2 ADVVSDYDCAVIDEIQMLGCKTRGFSFTRALL 33
+DV+ D + + DE+ + RG + L+
Sbjct: 370 SDVIRDLEWVIFDEVHYINDAERGVVWEEVLI 401
>RGD|1303059 [details] [associations]
symbol:Skiv2l "superkiller viralicidic activity 2-like (S.
cerevisiae )" species:10116 "Rattus norvegicus" [GO:0055087 "Ski
complex" evidence=ISO] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
RGD:1303059 GO:GO:0005524 GO:GO:0003676 EMBL:BX883045
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG4581 InterPro:IPR025696 Pfam:PF13234 HOGENOM:HOG000163048
KO:K12599 CTD:6499 HOVERGEN:HBG060025 OrthoDB:EOG47H5P5
IPI:IPI00417365 RefSeq:NP_998724.1 UniGene:Rn.138027
ProteinModelPortal:Q6MG76 IntAct:Q6MG76 PhosphoSite:Q6MG76
PRIDE:Q6MG76 GeneID:294260 KEGG:rno:294260 UCSC:RGD:1303059
InParanoid:Q6MG76 NextBio:637849 ArrayExpress:Q6MG76
Genevestigator:Q6MG76 Uniprot:Q6MG76
Length = 1241
Score = 127 (49.8 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 32/86 (37%), Positives = 46/86 (53%)
Query: 144 VLVASDAIGMGLNLNISRIIFSTMKKFDGVELRDLTVPEVKQIAGRAGRYGSKFPVGEVT 203
VL A++ MG+N+ ++F +M+K DG RDL E Q+AGRAGR G P G V
Sbjct: 652 VLFATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLD-PTGTVI 710
Query: 204 CLDSEDLPL---LHKSLLEPSPMLES 226
L +P LH+ ++ L+S
Sbjct: 711 LLCKGRVPEMADLHRMMMGKPSQLQS 736
Score = 45 (20.9 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 8/32 (25%), Positives = 16/32 (50%)
Query: 2 ADVVSDYDCAVIDEIQMLGCKTRGFSFTRALL 33
+DV+ D + + DE+ + RG + L+
Sbjct: 405 SDVIRDLEWVIFDEVHYINDAERGVVWEEVLI 436
>UNIPROTKB|E1BMS0 [details] [associations]
symbol:LOC100139548 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0055087 "Ski complex" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR025696 Pfam:PF13234
GO:GO:0055087 OMA:TRLDETC GeneTree:ENSGT00690000102154
EMBL:DAAA02055371 IPI:IPI00690289 RefSeq:XP_003583920.1
RefSeq:XP_003587743.1 Ensembl:ENSBTAT00000007339 GeneID:100139548
KEGG:bta:100139548 Uniprot:E1BMS0
Length = 1246
Score = 127 (49.8 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 32/86 (37%), Positives = 46/86 (53%)
Query: 144 VLVASDAIGMGLNLNISRIIFSTMKKFDGVELRDLTVPEVKQIAGRAGRYGSKFPVGEVT 203
VL A++ MG+N+ ++F +M+K DG RDL E Q+AGRAGR G P G V
Sbjct: 658 VLFATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLD-PTGTVI 716
Query: 204 CLDSEDLPL---LHKSLLEPSPMLES 226
L +P LH+ ++ L+S
Sbjct: 717 LLCKGRVPEMADLHRMMMGKPSQLQS 742
Score = 45 (20.9 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 8/32 (25%), Positives = 16/32 (50%)
Query: 2 ADVVSDYDCAVIDEIQMLGCKTRGFSFTRALL 33
+DV+ D + + DE+ + RG + L+
Sbjct: 411 SDVIRDLEWVIFDEVHYINDAERGVVWEEVLI 442
>UNIPROTKB|E2RSD6 [details] [associations]
symbol:SKIV2L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0055087 "Ski complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR025696 Pfam:PF13234
GO:GO:0055087 KO:K12599 OMA:TRLDETC GeneTree:ENSGT00690000102154
CTD:6499 EMBL:AAEX03008222 RefSeq:XP_538841.2
ProteinModelPortal:E2RSD6 Ensembl:ENSCAFT00000001053 GeneID:481720
KEGG:cfa:481720 NextBio:20856463 Uniprot:E2RSD6
Length = 1246
Score = 127 (49.8 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 32/86 (37%), Positives = 46/86 (53%)
Query: 144 VLVASDAIGMGLNLNISRIIFSTMKKFDGVELRDLTVPEVKQIAGRAGRYGSKFPVGEVT 203
VL A++ MG+N+ ++F +M+K DG RDL E Q+AGRAGR G P G V
Sbjct: 658 VLFATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLD-PTGTVI 716
Query: 204 CLDSEDLPL---LHKSLLEPSPMLES 226
L +P LH+ ++ L+S
Sbjct: 717 LLCKGRVPEMADLHRMMMGKPSQLQS 742
Score = 45 (20.9 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 8/32 (25%), Positives = 16/32 (50%)
Query: 2 ADVVSDYDCAVIDEIQMLGCKTRGFSFTRALL 33
+DV+ D + + DE+ + RG + L+
Sbjct: 411 SDVIRDLEWVIFDEVHYINDAERGVVWEEVLI 442
>UNIPROTKB|Q15477 [details] [associations]
symbol:SKIV2L "Helicase SKI2W" species:9606 "Homo sapiens"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0055087 "Ski
complex" evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=TAS] Reactome:REACT_17015 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 EMBL:AF019413 EMBL:AL662849 EMBL:AL645922
eggNOG:COG4581 InterPro:IPR025696 Pfam:PF13234 GO:GO:0055087
HOGENOM:HOG000163048 KO:K12599 OMA:TRLDETC EMBL:U09877 EMBL:X98378
EMBL:Z48796 IPI:IPI00414819 PIR:S56752 RefSeq:NP_008860.4
UniGene:Hs.89864 ProteinModelPortal:Q15477 SMR:Q15477 IntAct:Q15477
STRING:Q15477 PhosphoSite:Q15477 DMDM:3123284 PaxDb:Q15477
PRIDE:Q15477 DNASU:6499 Ensembl:ENST00000375394
Ensembl:ENST00000383336 Ensembl:ENST00000412823
Ensembl:ENST00000421789 Ensembl:ENST00000429465
Ensembl:ENST00000448219 GeneID:6499 KEGG:hsa:6499 UCSC:uc003nyn.1
CTD:6499 GeneCards:GC06P031926 H-InvDB:HIX0005742
H-InvDB:HIX0166115 H-InvDB:HIX0166390 H-InvDB:HIX0166908
H-InvDB:HIX0167165 H-InvDB:HIX0167404 HGNC:HGNC:10898 MIM:600478
MIM:614602 neXtProt:NX_Q15477 Orphanet:84064 PharmGKB:PA35798
HOVERGEN:HBG060025 InParanoid:Q15477 OrthoDB:EOG47H5P5
PhylomeDB:Q15477 ChiTaRS:SKIV2L GenomeRNAi:6499 NextBio:25263
ArrayExpress:Q15477 Bgee:Q15477 CleanEx:HS_SKIV2L
Genevestigator:Q15477 Uniprot:Q15477
Length = 1246
Score = 127 (49.8 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 32/86 (37%), Positives = 46/86 (53%)
Query: 144 VLVASDAIGMGLNLNISRIIFSTMKKFDGVELRDLTVPEVKQIAGRAGRYGSKFPVGEVT 203
VL A++ MG+N+ ++F +M+K DG RDL E Q+AGRAGR G P G V
Sbjct: 658 VLFATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLD-PTGTVI 716
Query: 204 CLDSEDLPL---LHKSLLEPSPMLES 226
L +P LH+ ++ L+S
Sbjct: 717 LLCKGRVPEMADLHRMMMGKPSQLQS 742
Score = 45 (20.9 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 25/121 (20%), Positives = 50/121 (41%)
Query: 2 ADVVSDYDCAVIDEIQMLGCKTRGFSFTRALLGICANELHLCGDPAAVPLIQQILQVTGD 61
+DV+ D + + DE+ + RG + L+ + + + + A VP + G
Sbjct: 411 SDVIRDLEWVIFDEVHYINDVERGVVWEEVLI-MLPDHVSIILLSATVPNALEFADWIGR 469
Query: 62 DVKVQSY--ERLSPLVPLNVPL--GSFSNIQTGDCIVTFSRHAIYRLK---KAIESRGKH 114
+ Q Y ++ VPL L G+ S Q G+ + + K A+E++ +
Sbjct: 470 LKRRQIYVISTVTRPVPLEHYLFTGNSSKTQ-GELFLLLDSRGAFHTKGYYAAVEAKKER 528
Query: 115 L 115
+
Sbjct: 529 M 529
>UNIPROTKB|F1RQW4 [details] [associations]
symbol:SKIV2L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0055087 "Ski complex" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR025696 Pfam:PF13234
GO:GO:0055087 OMA:TRLDETC GeneTree:ENSGT00690000102154
EMBL:CT956038 Ensembl:ENSSSCT00000001566 ArrayExpress:F1RQW4
Uniprot:F1RQW4
Length = 1246
Score = 127 (49.8 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 32/86 (37%), Positives = 46/86 (53%)
Query: 144 VLVASDAIGMGLNLNISRIIFSTMKKFDGVELRDLTVPEVKQIAGRAGRYGSKFPVGEVT 203
VL A++ MG+N+ ++F +M+K DG RDL E Q+AGRAGR G P G V
Sbjct: 658 VLFATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLD-PTGTVI 716
Query: 204 CLDSEDLPL---LHKSLLEPSPMLES 226
L +P LH+ ++ L+S
Sbjct: 717 LLCKGRVPEMADLHRMMMGKPSQLQS 742
Score = 45 (20.9 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 8/32 (25%), Positives = 16/32 (50%)
Query: 2 ADVVSDYDCAVIDEIQMLGCKTRGFSFTRALL 33
+DV+ D + + DE+ + RG + L+
Sbjct: 411 SDVIRDLEWVIFDEVHYINDAERGVVWEEVLI 442
>DICTYBASE|DDB_G0277211 [details] [associations]
symbol:DDB_G0277211 "superkiller viralicidic activity
2-like protein" species:44689 "Dictyostelium discoideum"
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0277211 GO:GO:0005524
GO:GO:0003676 EMBL:AAFI02000019 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG4581 InterPro:IPR025696
Pfam:PF13234 KO:K12599 OMA:TRLDETC RefSeq:XP_642686.1
ProteinModelPortal:Q86K90 EnsemblProtists:DDB0233454 GeneID:8620875
KEGG:ddi:DDB_G0277211 InParanoid:Q86K90 Uniprot:Q86K90
Length = 1378
Score = 128 (50.1 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 41/137 (29%), Positives = 68/137 (49%)
Query: 101 IYRLKKAIESRGKHLCSIVYGSLPPETRTRQATRFNDASSEFDVLVASDAIGMGLNLNIS 160
I ++K+ +E RG + +G L P + F+ S VL A++ MG+N+
Sbjct: 745 ILQMKELLE-RG---IGVHHGGLLPIVKELVEILFS--KSLVKVLFATETFAMGVNMPAK 798
Query: 161 RIIFSTMKKFDGVELRDLTVPEVKQIAGRAGRYGSKFPVGEVTCLDSEDLPLLHKSLLEP 220
+++S+ +K DG+ RDL E Q++GRAGR G VG V +D+P ++ +E
Sbjct: 799 TVVYSSTRKHDGITFRDLIPGEYTQMSGRAGRRGLD-KVGTVIITYWKDIP--EQATIES 855
Query: 221 SPMLESAGLFPNFDLIY 237
+ + L F L Y
Sbjct: 856 MILGTPSRLNSQFRLTY 872
Score = 44 (20.5 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 8/32 (25%), Positives = 16/32 (50%)
Query: 2 ADVVSDYDCAVIDEIQMLGCKTRGFSFTRALL 33
AD++ D + + DE+ L RG + ++
Sbjct: 534 ADLIRDIEWVIFDEVHYLNDLERGVVWEEVII 565
>SGD|S000004390 [details] [associations]
symbol:SKI2 "Ski complex component and putative RNA helicase"
species:4932 "Saccharomyces cerevisiae" [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0070478
"nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic
nonsense-mediated decay" evidence=IGI;IMP] [GO:0016817 "hydrolase
activity, acting on acid anhydrides" evidence=IEA] [GO:0055087 "Ski
complex" evidence=IDA;IPI] [GO:0034427 "nuclear-transcribed mRNA
catabolic process, exonucleolytic, 3'-5'" evidence=IMP] [GO:0070481
"nuclear-transcribed mRNA catabolic process, non-stop decay"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006417 "regulation of translation" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0051607 "defense
response to virus" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 SGD:S000004390 GO:GO:0005524
GO:GO:0006417 GO:GO:0003677 EMBL:BK006945 GO:GO:0051607
GO:GO:0003723 EMBL:U19729 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:Z18944 EMBL:L13469 GO:GO:0008026 GO:GO:0003724
GO:GO:0070478 GO:GO:0070481 eggNOG:COG4581 KO:K05544
RefSeq:NP_013505.4 GeneID:851117 KEGG:sce:YLR401C
InterPro:IPR025696 Pfam:PF13234 GO:GO:0055087 HOGENOM:HOG000163048
KO:K12599 OMA:TRLDETC OrthoDB:EOG4WM82R PIR:S55954
RefSeq:NP_013502.3 PDB:4A4K PDB:4A4Z PDBsum:4A4K PDBsum:4A4Z
ProteinModelPortal:P35207 SMR:P35207 DIP:DIP-5887N IntAct:P35207
MINT:MINT-662639 STRING:P35207 PaxDb:P35207 PeptideAtlas:P35207
EnsemblFungi:YLR398C GeneID:851114 KEGG:sce:YLR398C CYGD:YLR398c
GeneTree:ENSGT00690000102154 NextBio:967830 Genevestigator:P35207
GermOnline:YLR398C Uniprot:P35207
Length = 1287
Score = 125 (49.1 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 27/51 (52%), Positives = 35/51 (68%)
Query: 144 VLVASDAIGMGLNLNISRIIFSTMKKFDGVELRDLTVPEVKQIAGRAGRYG 194
VL A++ MGLNL +IFS+++K DG LR+LT E Q+AGRAGR G
Sbjct: 718 VLFATETFAMGLNLPTRTVIFSSIRKHDGNGLRELTPGEFTQMAGRAGRRG 768
Score = 44 (20.5 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 7/32 (21%), Positives = 17/32 (53%)
Query: 2 ADVVSDYDCAVIDEIQMLGCKTRGFSFTRALL 33
AD++ D + + DE+ + + RG + ++
Sbjct: 432 ADLIRDVEFVIFDEVHYVNDQDRGVVWEEVII 463
>ASPGD|ASPL0000070749 [details] [associations]
symbol:mtr4 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0031499 "TRAMP
complex" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:BN001303
GO:GO:0031499 GO:GO:0043629 GO:GO:0071035 GO:GO:0071038
EMBL:AACD01000076 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0000467 GO:GO:0071042 GO:GO:0071051 GO:GO:0008143
GO:GO:0034459 eggNOG:COG4581 GO:GO:0034475 GO:GO:0034476
HOGENOM:HOG000163047 KO:K12598 OMA:ENFQKAM InterPro:IPR025696
Pfam:PF13234 OrthoDB:EOG4S1XG7 GO:GO:0071049 RefSeq:XP_662016.1
ProteinModelPortal:Q5B4W8 STRING:Q5B4W8
EnsemblFungi:CADANIAT00006045 GeneID:2872204 KEGG:ani:AN4412.2
Uniprot:Q5B4W8
Length = 1073
Score = 121 (47.7 bits), Expect = 0.00072, P = 0.00072
Identities = 44/167 (26%), Positives = 78/167 (46%)
Query: 144 VLVASDAIGMGLNLNISRIIFSTMKKFDGVELRDLTVPEVKQIAGRAGRYGSKFPVGEVT 203
VL A++ +GLN+ ++F++++KFDG R +T E Q++GRAGR G G V
Sbjct: 502 VLFATETFSIGLNMPAKTVVFTSVRKFDGFSQRWVTPSEFVQMSGRAGRRGLD-DRGIVI 560
Query: 204 CLDSEDL-PLLHKSLLEPSPMLESAGLFPNFDLIYMYSRLH---PDSSLYGILEHFLENA 259
+ E++ P + K ++ ++ +++I R+ P+ L F A
Sbjct: 561 MMIGEEMDPAVAKEIVRGEQDRLNSAFHLGYNMILNLMRVEGISPEFMLERCFYQFQNTA 620
Query: 260 KLSE-NYFFANCEEVLKVATVIDQLPLRLHEKYLFCISPVDM-NDDI 304
L+ A EE T+ D+ +R +Y + +D NDD+
Sbjct: 621 GLAGLEKELAELEEKRANMTISDEGTIR---EYYDIRTQIDQFNDDV 664
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.138 0.404 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 414 402 0.00099 117 3 11 22 0.36 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 45
No. of states in DFA: 607 (65 KB)
Total size of DFA: 241 KB (2131 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 32.99u 0.09s 33.08t Elapsed: 00:00:02
Total cpu time: 32.99u 0.09s 33.08t Elapsed: 00:00:02
Start: Tue May 21 04:11:02 2013 End: Tue May 21 04:11:04 2013