BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 015052
         (414 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|307136360|gb|ADN34174.1| auxin-regulated protein [Cucumis melo subsp. melo]
          Length = 575

 Score =  674 bits (1738), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 316/399 (79%), Positives = 359/399 (89%), Gaps = 3/399 (0%)

Query: 1   MLEKMETVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFK 60
           MLEKME  D +++IE+FE +T+DAER+QRETL+KILEEN SAEYLQNLGLNGRTDP+SFK
Sbjct: 1   MLEKMEAFDGEKVIEQFEEMTRDAERVQRETLKKILEENGSAEYLQNLGLNGRTDPQSFK 60

Query: 61  SCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTL 120
            CVPLV+H+DL+ YIQRI DGD SPILTGKPI TIS SSGTT+G+PK +PFNDEL+ETT+
Sbjct: 61  DCVPLVSHDDLESYIQRIADGDSSPILTGKPIKTISLSSGTTKGRPKLIPFNDELLETTM 120

Query: 121 QIFRTSYAFRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQ 180
           QI+RTS+AFRN+E P+GKGKALQFIY SKQ KT GGL AGTATTNVYRS+ FK+ M+A+Q
Sbjct: 121 QIYRTSFAFRNKEVPLGKGKALQFIYSSKQFKTNGGLAAGTATTNVYRSAQFKSTMRAIQ 180

Query: 181 SQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCD 240
           SQCCSPDEVIFGPDFHQSLYCHLLCGLIFR+E++ VFSTFAHS+VH+FRTFE VWEELC 
Sbjct: 181 SQCCSPDEVIFGPDFHQSLYCHLLCGLIFRDEVEFVFSTFAHSIVHSFRTFEQVWEELCS 240

Query: 241 DIREGVLSSRITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSG 300
           +IR+GVLSS +T PSIRAAMSK+LKPNPELADLI++KC GLSNWYGLIPELFPNAKY+ G
Sbjct: 241 NIRDGVLSSWVTAPSIRAAMSKLLKPNPELADLIYRKCEGLSNWYGLIPELFPNAKYIYG 300

Query: 301 IMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEF 360
           IMTGSME YLKKLRHYAG LPLMSADYGSSEGW+GANVNP LPPE+ATFAVLPNIGYFEF
Sbjct: 301 IMTGSMEPYLKKLRHYAGHLPLMSADYGSSEGWVGANVNPMLPPEMATFAVLPNIGYFEF 360

Query: 361 IPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
           IP +  N + Q      KP+GLTEVK+GEEYEIIVTNVA
Sbjct: 361 IPLK-ENAQGQHQ--RNKPIGLTEVKIGEEYEIIVTNVA 396


>gi|449432068|ref|XP_004133822.1| PREDICTED: probable indole-3-acetic acid-amido synthetase
           GH3.5-like [Cucumis sativus]
 gi|449477906|ref|XP_004155158.1| PREDICTED: probable indole-3-acetic acid-amido synthetase
           GH3.5-like [Cucumis sativus]
          Length = 572

 Score =  664 bits (1713), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 313/399 (78%), Positives = 355/399 (88%), Gaps = 6/399 (1%)

Query: 1   MLEKMETVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFK 60
           MLEKME  D +++IE+FE +T+DAER+QRETL+KILEEN SAEYLQNLGLNGRTDP+SFK
Sbjct: 1   MLEKMEAFDGEKVIEQFEEMTRDAERVQRETLKKILEENGSAEYLQNLGLNGRTDPQSFK 60

Query: 61  SCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTL 120
            CVPLV H+DL+ YIQRI DGD SPILTGKPI TIS SSGTT+G+PK +PFNDEL+ETT+
Sbjct: 61  DCVPLVNHDDLESYIQRIADGDSSPILTGKPIKTISLSSGTTKGRPKLIPFNDELLETTM 120

Query: 121 QIFRTSYAFRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQ 180
           QI+RTS+AFRN+E P+G GKALQFIY SKQ KT GGL AGTATTNVYRS+ FK+ M+A+Q
Sbjct: 121 QIYRTSFAFRNKEVPLGNGKALQFIYSSKQIKTNGGLAAGTATTNVYRSAQFKSTMQAIQ 180

Query: 181 SQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCD 240
           SQCCSPDEVIFGPDFHQSLYCHLLCGLIFR+E++ VFSTFAHSLVH+FRTFE VWEELC 
Sbjct: 181 SQCCSPDEVIFGPDFHQSLYCHLLCGLIFRDEVESVFSTFAHSLVHSFRTFEEVWEELCS 240

Query: 241 DIREGVLSSRITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSG 300
           +IR+GVLSS +TVPSIRAAMSK+LKPNPELADLI+KKC GLSNWYG+IPELFPNAKY+ G
Sbjct: 241 NIRDGVLSSWVTVPSIRAAMSKLLKPNPELADLIYKKCEGLSNWYGVIPELFPNAKYIYG 300

Query: 301 IMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEF 360
           IMTGSME YLKKLRHYAG LPLMSADYGSSEGW+GANV P LPPE+ TFAVLPN+GYFEF
Sbjct: 301 IMTGSMEPYLKKLRHYAGHLPLMSADYGSSEGWVGANVKPMLPPEMVTFAVLPNVGYFEF 360

Query: 361 IPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
           IP +     +Q L    KP+GLTEVK+GE YEIIVTNVA
Sbjct: 361 IPLKES---AQGL---NKPIGLTEVKIGEVYEIIVTNVA 393


>gi|357512525|ref|XP_003626551.1| GH3 family protein [Medicago truncatula]
 gi|355501566|gb|AES82769.1| GH3 family protein [Medicago truncatula]
          Length = 676

 Score =  650 bits (1678), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 302/396 (76%), Positives = 353/396 (89%)

Query: 1   MLEKMETVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFK 60
           MLE+++  ++D++IEEFE +TKDAER+QRETL++ILE NASAEYLQN GL+GRTD ESFK
Sbjct: 1   MLERVKEFNMDKVIEEFELMTKDAERVQRETLKRILEVNASAEYLQNFGLDGRTDLESFK 60

Query: 61  SCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTL 120
           SC+PL TH+DL+P+I RI+DGD SPILTGKPITT+S SSGTTQGKPK++P+NDEL ETT+
Sbjct: 61  SCIPLATHKDLEPFINRILDGDDSPILTGKPITTMSLSSGTTQGKPKYIPWNDELFETTM 120

Query: 121 QIFRTSYAFRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQ 180
           QI+RTS+A+RNREFPI  GKAL FIYGSKQ KTKGGL A TAT+NV+R+ ++K  MKA++
Sbjct: 121 QIYRTSFAYRNREFPIKNGKALNFIYGSKQFKTKGGLIATTATSNVFRNPSYKHAMKALK 180

Query: 181 SQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCD 240
           SQCCSPDEVIFG DF QSLYCHLLCGLIFREE+QLV STFAHS+VHAFR+FE VWEELC+
Sbjct: 181 SQCCSPDEVIFGGDFFQSLYCHLLCGLIFREEVQLVCSTFAHSIVHAFRSFEQVWEELCN 240

Query: 241 DIREGVLSSRITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSG 300
           DIREGVLSSR+TVPSIR AMSK+LKPNPELA++IHK+C GLSNWYGLIPELFPNAKY+ G
Sbjct: 241 DIREGVLSSRVTVPSIRTAMSKLLKPNPELANIIHKRCIGLSNWYGLIPELFPNAKYIYG 300

Query: 301 IMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEF 360
           IMTGSME YL KLRHYAG LPL +ADYG+SEGWI ANVNP +PPELAT+AVLP IGYFEF
Sbjct: 301 IMTGSMEPYLVKLRHYAGVLPLCTADYGASEGWIAANVNPKIPPELATYAVLPQIGYFEF 360

Query: 361 IPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVT 396
           IP      E+  LC+ P+PVGLTEVKVGEEYEI++T
Sbjct: 361 IPLTQLENENTFLCVNPQPVGLTEVKVGEEYEIVMT 396


>gi|118486804|gb|ABK95237.1| unknown [Populus trichocarpa]
          Length = 576

 Score =  650 bits (1678), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 310/402 (77%), Positives = 353/402 (87%), Gaps = 8/402 (1%)

Query: 1   MLEK-METVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESF 59
           MLEK ME ++ +++IEEFE +TKDA  +QRETL+KILEEN SAEYLQNLGLNG++DPESF
Sbjct: 1   MLEKKMEGINTNKVIEEFEALTKDAGGVQRETLKKILEENGSAEYLQNLGLNGKSDPESF 60

Query: 60  KSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETT 119
           KSCVPLVTHEDL+ YI RI +GD S +LTGKPI+ +S SSGTTQGK KF+PFNDELME T
Sbjct: 61  KSCVPLVTHEDLEAYIHRIAEGDSSSVLTGKPISDMSLSSGTTQGKRKFVPFNDELMENT 120

Query: 120 LQIFRTSYAFRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAM 179
           LQI+RTS+AFRNREFP+ KGK+LQF+Y SK  KTKGGL AGTATTN++R+S +K+ MKA+
Sbjct: 121 LQIYRTSFAFRNREFPLEKGKSLQFVYSSKPGKTKGGLGAGTATTNLFRNSKYKSGMKAI 180

Query: 180 QSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELC 239
           Q QCCSPDEVIFGPDFHQSLYCHLLCGL+FREEIQ VFSTFAHS+V AFRTFE VWEELC
Sbjct: 181 QFQCCSPDEVIFGPDFHQSLYCHLLCGLLFREEIQFVFSTFAHSIVLAFRTFEQVWEELC 240

Query: 240 DDIREGVLSSRITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLS 299
           +DIR+G LSSR+T  S+R AM K+L+PNPELADLI+KKCSGLSNWYGLIPELFPNAKY+ 
Sbjct: 241 NDIRDGELSSRVTALSVRMAMRKLLRPNPELADLIYKKCSGLSNWYGLIPELFPNAKYIY 300

Query: 300 GIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFE 359
           GIMTGSME YLKKLRHYAG+LPLMSADYGSSEGWI ANVNP LPPELATFAVLPNIGYFE
Sbjct: 301 GIMTGSMEPYLKKLRHYAGELPLMSADYGSSEGWIAANVNPKLPPELATFAVLPNIGYFE 360

Query: 360 FIPQRLGNLESQVLCI--EPKPVGLTEVKVGEEYEIIVTNVA 399
           FIP     L+    C+  E KPVGLTEVK+GE+YEI+VTN A
Sbjct: 361 FIP-----LQDNAECMYKESKPVGLTEVKIGEDYEIVVTNFA 397


>gi|356571222|ref|XP_003553778.1| PREDICTED: probable indole-3-acetic acid-amido synthetase
           GH3.5-like [Glycine max]
          Length = 587

 Score =  650 bits (1678), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 305/402 (75%), Positives = 356/402 (88%), Gaps = 3/402 (0%)

Query: 1   MLEKMETVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFK 60
           MLEK+   ++D++I+EFE +T+DAER+QRETL++ILE+NASAEYLQ+LGLNGRTDPESFK
Sbjct: 6   MLEKVGEFNMDKVIQEFELLTRDAERVQRETLKRILEDNASAEYLQSLGLNGRTDPESFK 65

Query: 61  SCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTL 120
           +CVPLVTH++L+PYI RIIDGD SPILTGKPITT+S SSGTTQGKPK++P+NDEL ETT+
Sbjct: 66  ACVPLVTHKELEPYIYRIIDGDASPILTGKPITTMSLSSGTTQGKPKYVPWNDELYETTM 125

Query: 121 QIFRTSYAFRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQ 180
           QI+ TS+ FRNREFPI  GKAL FIYGSKQ KTKGGL A TAT+NV+ S+ +K  M+A+Q
Sbjct: 126 QIYLTSFVFRNREFPIKNGKALSFIYGSKQLKTKGGLAARTATSNVFCSAGYKCAMRALQ 185

Query: 181 SQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCD 240
           SQCCSPDEVIFGPDF QSLYCHLLCGLIFREE+Q V STFAHS+VHAFRTFE VWEELC+
Sbjct: 186 SQCCSPDEVIFGPDFFQSLYCHLLCGLIFREEVQFVSSTFAHSIVHAFRTFEQVWEELCN 245

Query: 241 DIREGVLSSRITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSG 300
           DIREGVL+  +T+PSIR AMSK+LKPNPELA+ IH+KC GLSNWYGLIPELFPNAKY+ G
Sbjct: 246 DIREGVLTRNVTIPSIRMAMSKLLKPNPELANTIHQKCRGLSNWYGLIPELFPNAKYIYG 305

Query: 301 IMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEF 360
           IMTGSME YLKK+RHYAG+LPL++ADYGSSEGWI ANVNP LPPE AT+AVLP+IGYFEF
Sbjct: 306 IMTGSMEPYLKKMRHYAGELPLLTADYGSSEGWIAANVNPQLPPEYATYAVLPHIGYFEF 365

Query: 361 IP-QRLGNL--ESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
           IP     N   E   LC++PKP+GLTEVKVGEEYEI++TN A
Sbjct: 366 IPLSEFENTKGEPDFLCVDPKPMGLTEVKVGEEYEIVMTNPA 407


>gi|224064181|ref|XP_002301399.1| GH3 family protein [Populus trichocarpa]
 gi|222843125|gb|EEE80672.1| GH3 family protein [Populus trichocarpa]
          Length = 576

 Score =  650 bits (1677), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 310/402 (77%), Positives = 353/402 (87%), Gaps = 8/402 (1%)

Query: 1   MLEK-METVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESF 59
           MLEK ME ++ +++IEEFE +TKDA  +QRETL+KILEEN SAEYLQNLGLNG+TDPESF
Sbjct: 1   MLEKKMEGINTNKVIEEFEALTKDAGGVQRETLKKILEENGSAEYLQNLGLNGKTDPESF 60

Query: 60  KSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETT 119
           KSCVPLVTHEDL+ YI RI +GD S +LTGKPI+ +S SSGTTQGK KF+PFNDELME T
Sbjct: 61  KSCVPLVTHEDLEAYIHRIAEGDSSSVLTGKPISDMSLSSGTTQGKRKFVPFNDELMENT 120

Query: 120 LQIFRTSYAFRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAM 179
           LQI+RTS+AFRNREFP+ KGK+LQF+Y SK  KTKGGL AGTATTN++R+S +K+ MKA+
Sbjct: 121 LQIYRTSFAFRNREFPLEKGKSLQFVYSSKPGKTKGGLGAGTATTNLFRNSKYKSGMKAI 180

Query: 180 QSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELC 239
           Q QCCSPDEVIFGPDFHQSLYCHLLCGL+FREEIQ VFSTFAHS+V AFRTFE VWEELC
Sbjct: 181 QFQCCSPDEVIFGPDFHQSLYCHLLCGLLFREEIQFVFSTFAHSIVLAFRTFEQVWEELC 240

Query: 240 DDIREGVLSSRITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLS 299
           +DIR+G LSSR+T  S+R AM K+L+PNP+LADLI+KKCSGLSNWYGLIPELFPNAKY+ 
Sbjct: 241 NDIRDGELSSRVTALSVRMAMRKLLRPNPDLADLIYKKCSGLSNWYGLIPELFPNAKYIY 300

Query: 300 GIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFE 359
           GIMTGSME YLKKLRHYAG+LPLMSADYGSSEGWI ANVNP LPPELATFAVLPNIGYFE
Sbjct: 301 GIMTGSMEPYLKKLRHYAGELPLMSADYGSSEGWIAANVNPKLPPELATFAVLPNIGYFE 360

Query: 360 FIPQRLGNLESQVLCI--EPKPVGLTEVKVGEEYEIIVTNVA 399
           FIP     L+    C+  E KPVGLTEVK+GE+YEI+VTN A
Sbjct: 361 FIP-----LQDNAECMYKESKPVGLTEVKIGEDYEIVVTNFA 397


>gi|224127866|ref|XP_002320183.1| GH3 family protein [Populus trichocarpa]
 gi|222860956|gb|EEE98498.1| GH3 family protein [Populus trichocarpa]
          Length = 576

 Score =  648 bits (1671), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 311/400 (77%), Positives = 352/400 (88%), Gaps = 4/400 (1%)

Query: 1   MLEK-METVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESF 59
           MLEK ME ++ D++IEEFE +T+DA  +QRETL+KILEEN SAEYL N GLNGRTDPESF
Sbjct: 1   MLEKKMEGINTDKVIEEFEALTEDAGMVQRETLKKILEENGSAEYLLNSGLNGRTDPESF 60

Query: 60  KSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETT 119
           KSCVPLVTH+DL+ YI RI DGD SPILTGKPI  +S SSGTTQG+ K +PFNDELME T
Sbjct: 61  KSCVPLVTHKDLEAYIYRIADGDPSPILTGKPIPDMSLSSGTTQGRRKLVPFNDELMENT 120

Query: 120 LQIFRTSYAFRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAM 179
           LQI+RTS+AFRNREFP+ KGK+LQF+Y SK  KTKGGL AGTATTN++R+S +K  MKA+
Sbjct: 121 LQIYRTSFAFRNREFPLEKGKSLQFVYSSKPWKTKGGLGAGTATTNIFRNSKYKNGMKAI 180

Query: 180 QSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELC 239
           Q QCCSPDEVIFGPDFHQSLYCHLLCGL+FREEIQ VFSTFAHS++ AFRTFE VWEELC
Sbjct: 181 QFQCCSPDEVIFGPDFHQSLYCHLLCGLLFREEIQFVFSTFAHSILLAFRTFEQVWEELC 240

Query: 240 DDIREGVLSSRITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLS 299
           +DIR+G LSSR+T PS+R AMSK+LKP+PELADLI+KKCSGLSNWYGLIPELFPNAKY+ 
Sbjct: 241 NDIRDGELSSRVTAPSVRIAMSKLLKPSPELADLIYKKCSGLSNWYGLIPELFPNAKYIY 300

Query: 300 GIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFE 359
           GIMTGSME YLKKLRHYAG+LPLMSADYGSSEGW+ ANVNP LPPELATFAVLPNIGYFE
Sbjct: 301 GIMTGSMEPYLKKLRHYAGELPLMSADYGSSEGWVAANVNPKLPPELATFAVLPNIGYFE 360

Query: 360 FIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
           FIP    N  ++ L +EPKPVGLTEVK+GE+YEIIVT  A
Sbjct: 361 FIPL---NNNAECLYMEPKPVGLTEVKIGEDYEIIVTTFA 397


>gi|356506052|ref|XP_003521802.1| PREDICTED: probable indole-3-acetic acid-amido synthetase
           GH3.5-like [Glycine max]
          Length = 571

 Score =  645 bits (1664), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 303/399 (75%), Positives = 357/399 (89%), Gaps = 8/399 (2%)

Query: 1   MLEKMETVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFK 60
           MLEK+E  ++D++I+EFE +T+DAER+QRETL++ILE+NASAEYLQ+LGLNGRTDPESFK
Sbjct: 1   MLEKVEEFNMDKVIQEFELLTRDAERVQRETLKRILEDNASAEYLQSLGLNGRTDPESFK 60

Query: 61  SCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTL 120
           +CVP+VTH++L+PYI RIIDGD SPILTGKPITT+S SSGTTQGKPK++P+NDEL ETT+
Sbjct: 61  ACVPMVTHKELEPYIYRIIDGDASPILTGKPITTMSLSSGTTQGKPKYVPWNDELYETTM 120

Query: 121 QIFRTSYAFRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQ 180
           QI++TS+AFRNREFPI  GKAL FIYGSKQ KTKGGL A TAT+NV+ S+ +K  M+A+Q
Sbjct: 121 QIYQTSFAFRNREFPIKNGKALSFIYGSKQLKTKGGLAARTATSNVFCSAGYKCAMRALQ 180

Query: 181 SQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCD 240
           SQCCSPDEVIFGPDF QSLYCHLLCGLIFREE++ V STFAHS+VHAFRTFE VWEELC+
Sbjct: 181 SQCCSPDEVIFGPDFFQSLYCHLLCGLIFREEVEFVSSTFAHSIVHAFRTFEQVWEELCN 240

Query: 241 DIREGVLSSRITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSG 300
           DIREGVL+  +TVPSIR AMSK+LKPNPELA+ IHKKC+GLSNWYGLIPELFPNAKY+ G
Sbjct: 241 DIREGVLTRNVTVPSIRMAMSKLLKPNPELANAIHKKCTGLSNWYGLIPELFPNAKYIYG 300

Query: 301 IMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEF 360
           IMTGSME YLKK+RHYAG+LPL++ADYGSSEGWI ANVNP LPPE AT+AVLP+IGYFEF
Sbjct: 301 IMTGSMEPYLKKMRHYAGELPLLTADYGSSEGWIAANVNPQLPPEYATYAVLPHIGYFEF 360

Query: 361 IPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
           IP  L  LE+       KP+GLT+VKVG+EYEI++TN A
Sbjct: 361 IP--LLELENT------KPLGLTQVKVGQEYEIVMTNPA 391


>gi|356520302|ref|XP_003528802.1| PREDICTED: probable indole-3-acetic acid-amido synthetase
           GH3.5-like [Glycine max]
          Length = 582

 Score =  643 bits (1658), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 304/402 (75%), Positives = 354/402 (88%), Gaps = 3/402 (0%)

Query: 1   MLEKMETVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFK 60
           MLEK+E  + + ++EEFE +TKDAERIQRETL++ILE+NASAEYL NLGLNGRTDPESFK
Sbjct: 1   MLEKVEEFNTERMMEEFERVTKDAERIQRETLKRILEDNASAEYLLNLGLNGRTDPESFK 60

Query: 61  SCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTL 120
           + VPLVTH+DL+PYI RIIDGD S +LTGKPITT+S SSGTTQGKPK++P+NDEL +TTL
Sbjct: 61  AFVPLVTHKDLEPYINRIIDGDFSSVLTGKPITTMSLSSGTTQGKPKYVPWNDELFDTTL 120

Query: 121 QIFRTSYAFRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQ 180
           QI+ TS+AFRNREFPI  GKAL FIY SKQ KTKGG+ AGTATTNV+R+  F+  MKA+Q
Sbjct: 121 QIYHTSFAFRNREFPINNGKALGFIYSSKQFKTKGGVLAGTATTNVFRNPGFQHAMKAIQ 180

Query: 181 SQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCD 240
           S  CSPDEVIFGPDFHQSLYCHLLCGLIFREE+QLV S FAHS+V+AFRTFE VWEELC 
Sbjct: 181 SPLCSPDEVIFGPDFHQSLYCHLLCGLIFREEVQLVSSIFAHSIVYAFRTFEQVWEELCV 240

Query: 241 DIREGVLSSRITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSG 300
           DI+EGVL+S++TVPSIR AMSK+LKP+PELA+LIH KC GLSNWYGLIPELFPN KY+ G
Sbjct: 241 DIKEGVLNSKVTVPSIREAMSKLLKPDPELANLIHNKCMGLSNWYGLIPELFPNVKYVHG 300

Query: 301 IMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEF 360
           IMTGSME YL+KLRHYAG+LPL+++DYGSSEGWIG NV P++PPELAT+ VLP IGYFEF
Sbjct: 301 IMTGSMEPYLRKLRHYAGELPLLTSDYGSSEGWIGTNVKPTVPPELATYTVLPQIGYFEF 360

Query: 361 IPQR-LGNL--ESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
           IP R L  +  ++  LC+EPKPVGLTEVKVGEEYEI++TN A
Sbjct: 361 IPLRELEEIKGDASFLCMEPKPVGLTEVKVGEEYEIVITNPA 402


>gi|383464620|gb|AFH35030.1| auxin-responsive GH3 family protein [Hevea brasiliensis]
          Length = 576

 Score =  639 bits (1649), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 311/401 (77%), Positives = 351/401 (87%), Gaps = 6/401 (1%)

Query: 1   MLEK-METVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESF 59
           MLEK ME +++D++IEEFE ITKDAER+Q ETL+KILEEN  AEYLQNLGLNGRTDPESF
Sbjct: 1   MLEKKMEKINIDKVIEEFEAITKDAERVQIETLKKILEENGCAEYLQNLGLNGRTDPESF 60

Query: 60  KSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETT 119
           +  VP+VTH++L+PYIQRI DGD S +LT KPITTIS SSGTTQGKPK+LPFND+LME T
Sbjct: 61  RDYVPIVTHKELEPYIQRIADGDSSSVLTRKPITTISLSSGTTQGKPKYLPFNDDLMENT 120

Query: 120 LQIFRTSYAFRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAM 179
           LQI+RTS+AFRNREFP   GKAL F + SKQS+TKGGL AGTATTN++RSS +K  ++ M
Sbjct: 121 LQIYRTSFAFRNREFPTVDGKALLFNFSSKQSRTKGGLAAGTATTNLFRSSCYKNAVRTM 180

Query: 180 QSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELC 239
           Q  CCSPDEVIFG DFHQSLYCHLLCGLI REEIQ VFSTFAHS+V AFRTFE VWEELC
Sbjct: 181 QFICCSPDEVIFGSDFHQSLYCHLLCGLIVREEIQFVFSTFAHSIVLAFRTFEQVWEELC 240

Query: 240 DDIREGVLSSRITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLS 299
           D+IR+G+LSSR+T PSIR AMS++LKPN ELA LIHKKCSGLSNWYGLIPELFPN KY+ 
Sbjct: 241 DNIRDGMLSSRVTDPSIRNAMSQVLKPNFELAQLIHKKCSGLSNWYGLIPELFPNVKYVY 300

Query: 300 GIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFE 359
           GIMTGSME YLKKLRHYAGD+PL+SADYG++EGWIGANVNP L PE ATFAVLPNIGYFE
Sbjct: 301 GIMTGSMEPYLKKLRHYAGDIPLLSADYGATEGWIGANVNPKLSPESATFAVLPNIGYFE 360

Query: 360 FIPQRLG-NLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
           FIP  LG N+E+  +  EPKPVGLTEVK+GEEYEIIVTN A
Sbjct: 361 FIP--LGDNVEN--IYTEPKPVGLTEVKIGEEYEIIVTNFA 397


>gi|297745402|emb|CBI40482.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  639 bits (1648), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 306/403 (75%), Positives = 347/403 (86%), Gaps = 4/403 (0%)

Query: 1   MLEKMETVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFK 60
           MLEKME    +++IEEFE +TKDA R+QRETL+KILE+NASAEYLQ  GLNGRTDPES++
Sbjct: 66  MLEKMEEFKAEKVIEEFEELTKDAGRVQRETLKKILEDNASAEYLQKQGLNGRTDPESYQ 125

Query: 61  SCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTL 120
           +CVPLVTH DL PYI+RI DGD SP+LTGKPI T+S SSGTTQGK K++PFNDEL+ETTL
Sbjct: 126 ACVPLVTHADLVPYIKRIADGDTSPVLTGKPIKTMSLSSGTTQGKQKYVPFNDELLETTL 185

Query: 121 QIFRTSYAFRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQ 180
           QI+RTS+AFRNREFP+  G ALQFIYGSKQ KT+GGL AGTATTNV+ SS FK  MKA++
Sbjct: 186 QIYRTSFAFRNREFPVRNGMALQFIYGSKQFKTEGGLFAGTATTNVFSSSQFKTTMKAIE 245

Query: 181 SQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCD 240
           S CCSPDEVIFGPDF QSLYCHLLCGLI   EIQLV STFAHS+V+AFRTFE VWE+LC 
Sbjct: 246 SPCCSPDEVIFGPDFRQSLYCHLLCGLIHHNEIQLVSSTFAHSIVYAFRTFEQVWEQLCA 305

Query: 241 DIREGVLSSRITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSG 300
           DI++GVL+  +TVPSIRA MSK+LKPNPELA+ I+KKCSGLSNWYG+IP LFPN KY+ G
Sbjct: 306 DIQDGVLTKDVTVPSIRAVMSKLLKPNPELAEWIYKKCSGLSNWYGVIPALFPNVKYVYG 365

Query: 301 IMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEF 360
           IMTGSME YLKKLRHYAGD+PL+SADYGSSEGWIGAN+NP LPPELAT+AVLPNIGYFEF
Sbjct: 366 IMTGSMEPYLKKLRHYAGDVPLLSADYGSSEGWIGANINPKLPPELATYAVLPNIGYFEF 425

Query: 361 IPQRLGNLESQVLCI----EPKPVGLTEVKVGEEYEIIVTNVA 399
           IP R    E +   I    E KPVGLTEVK+GEEYEIIVTN A
Sbjct: 426 IPLRGSAEEDRQDKIQSSFESKPVGLTEVKIGEEYEIIVTNFA 468


>gi|356560454|ref|XP_003548507.1| PREDICTED: probable indole-3-acetic acid-amido synthetase
           GH3.5-like [Glycine max]
          Length = 582

 Score =  639 bits (1647), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 300/402 (74%), Positives = 351/402 (87%), Gaps = 3/402 (0%)

Query: 1   MLEKMETVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFK 60
           MLEK+E  +++ ++EEFE +TKDAERIQ+ETL++ILE+NASAEYL NLGLNGRTDPESFK
Sbjct: 1   MLEKVEEFNIERVMEEFERVTKDAERIQKETLKRILEDNASAEYLLNLGLNGRTDPESFK 60

Query: 61  SCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTL 120
           + VPLVTH+DL+PYI RI+DGD S +LTGKPITT+S SSGTTQGKPK++P+ND+L +TTL
Sbjct: 61  AFVPLVTHKDLEPYINRILDGDFSSVLTGKPITTMSLSSGTTQGKPKYVPWNDKLFDTTL 120

Query: 121 QIFRTSYAFRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQ 180
           QI+ TS+AFRNREFPI  GKAL FIY SKQ KTKGG+ AGTATTNV+R+  F+  MK  Q
Sbjct: 121 QIYHTSFAFRNREFPINGGKALGFIYSSKQFKTKGGVLAGTATTNVFRNPGFRHAMKTTQ 180

Query: 181 SQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCD 240
           S  CSPDEVIFGPDFHQSLYCHLLCGLIFREE+QLV STFAHS+V+AFRTFE VWEELC 
Sbjct: 181 SPFCSPDEVIFGPDFHQSLYCHLLCGLIFREEVQLVSSTFAHSIVYAFRTFEQVWEELCV 240

Query: 241 DIREGVLSSRITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSG 300
           DI+EGVL+S++TVPS+RAAMSK+LKP+PELA+LIH KC GLSNWYGLIPELFPN KY+ G
Sbjct: 241 DIKEGVLNSKVTVPSVRAAMSKLLKPDPELANLIHSKCMGLSNWYGLIPELFPNVKYVHG 300

Query: 301 IMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEF 360
           IMTGSME YLKKLRHY G+LPL+++DYGSSEGWIG NV P++PPELAT+ VLP IGYFEF
Sbjct: 301 IMTGSMEPYLKKLRHYGGELPLLTSDYGSSEGWIGTNVKPTVPPELATYTVLPQIGYFEF 360

Query: 361 IPQRL---GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
           IP R       +S  LC+E KPVGLTEVK+GEEYEI+VTN A
Sbjct: 361 IPLRELEGAKGDSSFLCMEAKPVGLTEVKIGEEYEIVVTNPA 402


>gi|225454466|ref|XP_002280738.1| PREDICTED: probable indole-3-acetic acid-amido synthetase
           GH3.5-like [Vitis vinifera]
          Length = 583

 Score =  638 bits (1645), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 306/403 (75%), Positives = 347/403 (86%), Gaps = 4/403 (0%)

Query: 1   MLEKMETVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFK 60
           MLEKME    +++IEEFE +TKDA R+QRETL+KILE+NASAEYLQ  GLNGRTDPES++
Sbjct: 1   MLEKMEEFKAEKVIEEFEELTKDAGRVQRETLKKILEDNASAEYLQKQGLNGRTDPESYQ 60

Query: 61  SCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTL 120
           +CVPLVTH DL PYI+RI DGD SP+LTGKPI T+S SSGTTQGK K++PFNDEL+ETTL
Sbjct: 61  ACVPLVTHADLVPYIKRIADGDTSPVLTGKPIKTMSLSSGTTQGKQKYVPFNDELLETTL 120

Query: 121 QIFRTSYAFRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQ 180
           QI+RTS+AFRNREFP+  G ALQFIYGSKQ KT+GGL AGTATTNV+ SS FK  MKA++
Sbjct: 121 QIYRTSFAFRNREFPVRNGMALQFIYGSKQFKTEGGLFAGTATTNVFSSSQFKTTMKAIE 180

Query: 181 SQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCD 240
           S CCSPDEVIFGPDF QSLYCHLLCGLI   EIQLV STFAHS+V+AFRTFE VWE+LC 
Sbjct: 181 SPCCSPDEVIFGPDFRQSLYCHLLCGLIHHNEIQLVSSTFAHSIVYAFRTFEQVWEQLCA 240

Query: 241 DIREGVLSSRITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSG 300
           DI++GVL+  +TVPSIRA MSK+LKPNPELA+ I+KKCSGLSNWYG+IP LFPN KY+ G
Sbjct: 241 DIQDGVLTKDVTVPSIRAVMSKLLKPNPELAEWIYKKCSGLSNWYGVIPALFPNVKYVYG 300

Query: 301 IMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEF 360
           IMTGSME YLKKLRHYAGD+PL+SADYGSSEGWIGAN+NP LPPELAT+AVLPNIGYFEF
Sbjct: 301 IMTGSMEPYLKKLRHYAGDVPLLSADYGSSEGWIGANINPKLPPELATYAVLPNIGYFEF 360

Query: 361 IPQRLGNLESQVLCI----EPKPVGLTEVKVGEEYEIIVTNVA 399
           IP R    E +   I    E KPVGLTEVK+GEEYEIIVTN A
Sbjct: 361 IPLRGSAEEDRQDKIQSSFESKPVGLTEVKIGEEYEIIVTNFA 403


>gi|86212374|gb|ABC87760.1| jasmonic acid-amino acid-conjugating enzyme [Nicotiana attenuata]
          Length = 577

 Score =  636 bits (1641), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 302/399 (75%), Positives = 346/399 (86%), Gaps = 5/399 (1%)

Query: 1   MLEKMETVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFK 60
           ++EK E  D +E+IEEFE +TKDA +IQ ETL+KILEEN   EYLQ  GLNG+TD  SFK
Sbjct: 4   VVEKTEKFDPEEVIEEFEVLTKDAGKIQEETLQKILEENGGTEYLQQWGLNGKTDSLSFK 63

Query: 61  SCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTL 120
           +C+P+VTH+DL+PYI RI DGD+SPILTGKPITTIS SSGTTQGKPKF+PFN+ELME+T+
Sbjct: 64  NCIPIVTHKDLEPYIHRIADGDLSPILTGKPITTISLSSGTTQGKPKFVPFNEELMESTM 123

Query: 121 QIFRTSYAFRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQ 180
           QIF+TS+ FRNREFP+  GKALQFIYGSKQ KTKGGL AGTATTNVYR++ FK  MKAMQ
Sbjct: 124 QIFKTSFVFRNREFPVVNGKALQFIYGSKQFKTKGGLAAGTATTNVYRNAQFKKTMKAMQ 183

Query: 181 SQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCD 240
           + CCSPDEVIFGPDF QSLYCHLLCGLIFR+E+Q+V STFAHS+VHAFR FE +W+EL  
Sbjct: 184 TPCCSPDEVIFGPDFQQSLYCHLLCGLIFRDEVQVVSSTFAHSIVHAFRNFEQIWQELVT 243

Query: 241 DIREGVLSSRITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSG 300
           +IREGVLSSR+ VPS+RAAMSK+LKP+PELAD I  KCS LSNWYGLIPELFPN +Y+ G
Sbjct: 244 NIREGVLSSRVIVPSMRAAMSKLLKPDPELADTIFNKCSRLSNWYGLIPELFPNTRYIYG 303

Query: 301 IMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEF 360
           IMTGSME YLKKLRHYAGDLPL+SADYGSSEGWIGANVNP LPPEL T+AVLPNI YFEF
Sbjct: 304 IMTGSMEPYLKKLRHYAGDLPLLSADYGSSEGWIGANVNPELPPELVTYAVLPNIDYFEF 363

Query: 361 IPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
           IP  + NL+     +EP PVGLTEVK+GEEYEI+VTN A
Sbjct: 364 IP-LMENLDG----LEPMPVGLTEVKLGEEYEIVVTNFA 397


>gi|77539386|dbj|BAE46566.1| putative auxin-regulated protein [Nicotiana glutinosa]
          Length = 577

 Score =  630 bits (1624), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 299/391 (76%), Positives = 339/391 (86%), Gaps = 3/391 (0%)

Query: 9   DVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTH 68
           D +++IEEFE +TKDA +IQ ETL+KILE+N   EY+Q  GLNGR+DP++FK+CVP+VTH
Sbjct: 10  DQEQVIEEFEDLTKDAGKIQEETLKKILEQNGGTEYMQQWGLNGRSDPQTFKNCVPIVTH 69

Query: 69  EDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYA 128
            DL+PYIQRI DGD+SPILTGKPI TIS SSGTTQGKPKF+PFNDELME+T++IF+TS+A
Sbjct: 70  NDLEPYIQRIADGDLSPILTGKPIETISLSSGTTQGKPKFVPFNDELMESTMKIFKTSFA 129

Query: 129 FRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDE 188
           FRNREFPIG GKALQFIY SKQ KTKGGL AGTATTNVYR++ FK  MKAM + CCSPDE
Sbjct: 130 FRNREFPIGNGKALQFIYSSKQFKTKGGLAAGTATTNVYRNAQFKKTMKAMCTPCCSPDE 189

Query: 189 VIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLS 248
           VIFGPDFHQSLYCHLLCGLIFR+E+Q+V STFAHS+VHAFRTFE VWE L  DIREGVLS
Sbjct: 190 VIFGPDFHQSLYCHLLCGLIFRDEVQVVSSTFAHSIVHAFRTFEQVWEALVVDIREGVLS 249

Query: 249 SRITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEH 308
           SR+TVPSIR AMSK+LKP+PELAD I+ KCS LSNWYGLIPELFPN +Y+ GIMTGSME 
Sbjct: 250 SRVTVPSIRLAMSKLLKPDPELADTIYNKCSRLSNWYGLIPELFPNTRYIYGIMTGSMEP 309

Query: 309 YLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNL 368
           YLKKLRHYAG+LPL+SADYGSSEGW+G NVNP LPPEL T+AVLPNIGYFEFIP   GNL
Sbjct: 310 YLKKLRHYAGELPLLSADYGSSEGWVGVNVNPKLPPELVTYAVLPNIGYFEFIPLG-GNL 368

Query: 369 ESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
               +     PV LTEVKVGEEYEI+ TN A
Sbjct: 369 NG--VEQADSPVDLTEVKVGEEYEIVFTNFA 397


>gi|147810324|emb|CAN69491.1| hypothetical protein VITISV_015015 [Vitis vinifera]
          Length = 579

 Score =  630 bits (1624), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 302/399 (75%), Positives = 343/399 (85%), Gaps = 4/399 (1%)

Query: 5   METVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVP 64
           ME    +++IEEFE +TKDA R+QRETL+KILE+NASAEYLQ  GLNGRTDPES+++CVP
Sbjct: 1   MEEFKAEKVIEEFEELTKDAGRVQRETLKKILEDNASAEYLQKQGLNGRTDPESYQACVP 60

Query: 65  LVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFR 124
           LVTH DL PYI+RI DGD SP+LTGKPI T+S SSGTTQGK K++PFNDEL+ETTLQI+R
Sbjct: 61  LVTHADLVPYIKRIADGDXSPVLTGKPIKTMSLSSGTTQGKQKYVPFNDELLETTLQIYR 120

Query: 125 TSYAFRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCC 184
           TS+AFRNREFP+  G ALQFIYGSKQ KT+GGL AGTATTNV+ SS FK  MKA++S CC
Sbjct: 121 TSFAFRNREFPVRNGMALQFIYGSKQFKTEGGLFAGTATTNVFSSSQFKTTMKAIESPCC 180

Query: 185 SPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIRE 244
           SPDEVIFGPDF QSLYCHLLCGLI   EIQLV STFAHS+V+AFRTFE VWE+LC DI++
Sbjct: 181 SPDEVIFGPDFRQSLYCHLLCGLIHHNEIQLVSSTFAHSIVYAFRTFEQVWEQLCADIQD 240

Query: 245 GVLSSRITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTG 304
           GVL+  +TVPSIRA MSK+LKPNPELA+ I+KKCSGLSNWYG+IP LFPN KY+ GIMTG
Sbjct: 241 GVLTKDVTVPSIRAVMSKLLKPNPELAEWIYKKCSGLSNWYGVIPALFPNVKYVYGIMTG 300

Query: 305 SMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQR 364
           SME YLKKLRHYAGD+PL+SADYGSSEGWIGAN+NP LPPELAT+AVLPNIGYFEFIP R
Sbjct: 301 SMEPYLKKLRHYAGDVPLLSADYGSSEGWIGANINPKLPPELATYAVLPNIGYFEFIPLR 360

Query: 365 LGNLESQVLCI----EPKPVGLTEVKVGEEYEIIVTNVA 399
               E +   I    E KPVGLTEVK+GEEYEIIVTN A
Sbjct: 361 GSAEEDRQDKIQSSFESKPVGLTEVKIGEEYEIIVTNFA 399


>gi|86212377|gb|ABC87761.1| JAR1-like protein [Nicotiana attenuata]
          Length = 580

 Score =  627 bits (1617), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 302/402 (75%), Positives = 345/402 (85%), Gaps = 8/402 (1%)

Query: 1   MLEKMET-VDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESF 59
           ++EK+E   D +++IEEFE +TKDA +IQ ETL+KILE+N   EYLQ  GLNGRTDP++F
Sbjct: 4   LVEKIEKKFDQEKVIEEFEDLTKDAGKIQEETLKKILEQNGGTEYLQLWGLNGRTDPQTF 63

Query: 60  KSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETT 119
           K+CVP+VTH DL+PYIQRI DGD+SPILTGKPI TIS SSGTTQGKPKF+PFNDELME+T
Sbjct: 64  KNCVPIVTHNDLEPYIQRIADGDLSPILTGKPIETISLSSGTTQGKPKFVPFNDELMEST 123

Query: 120 LQIFRTSYAFRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAM 179
           +QIF+TS+AFRNREFPIG GKALQFIY SKQ KTKGGL AGTATTNVYR++ FK  MKAM
Sbjct: 124 MQIFKTSFAFRNREFPIGNGKALQFIYSSKQFKTKGGLAAGTATTNVYRNAQFKKTMKAM 183

Query: 180 QSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELC 239
            + CCSPDEVIFGPDFHQSLYCHLLCGLIF +E+Q+V STFAHS+VHAFRTFE VWE L 
Sbjct: 184 CTPCCSPDEVIFGPDFHQSLYCHLLCGLIFHDEVQVVSSTFAHSIVHAFRTFEQVWEALV 243

Query: 240 DDIREGVLSSRITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLS 299
            DI+EGVLSS +TVPSIR AMSK+LKP+PELAD I+ KCS LSNWYGLIP+LFPN +Y+ 
Sbjct: 244 VDIKEGVLSSGVTVPSIRLAMSKLLKPDPELADTIYNKCSRLSNWYGLIPDLFPNTRYIY 303

Query: 300 GIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFE 359
           GIMTGSME YLKKLRHYAG+LPL+SADYGSSEGW+G NVNP LPPEL T+AVLPNIGYFE
Sbjct: 304 GIMTGSMEPYLKKLRHYAGELPLLSADYGSSEGWVGVNVNPKLPPELVTYAVLPNIGYFE 363

Query: 360 FIPQRLGNLESQVLCIEP--KPVGLTEVKVGEEYEIIVTNVA 399
           FIP   GNL      IE    PVGLTEVK+GEEYE++ TN A
Sbjct: 364 FIPLG-GNLNG----IEQANSPVGLTEVKLGEEYEVVFTNFA 400


>gi|255586541|ref|XP_002533907.1| Indole-3-acetic acid-amido synthetase GH3.5, putative [Ricinus
           communis]
 gi|223526128|gb|EEF28472.1| Indole-3-acetic acid-amido synthetase GH3.5, putative [Ricinus
           communis]
          Length = 556

 Score =  615 bits (1585), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 289/380 (76%), Positives = 331/380 (87%), Gaps = 3/380 (0%)

Query: 20  ITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRII 79
           +TK+AER+Q+ETL+KILEEN SAEYLQNLGL+GRTDPESFK CVP+ TH DL+PYIQRI 
Sbjct: 1   MTKNAERVQKETLKKILEENGSAEYLQNLGLDGRTDPESFKICVPICTHGDLEPYIQRIA 60

Query: 80  DGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFPIGKG 139
           DGD SP+LTGKPITTIS SSGTTQGKPK++PF D+L++ TLQIFRTS+A+RNREFP+  G
Sbjct: 61  DGDSSPVLTGKPITTISLSSGTTQGKPKYVPFTDQLLDNTLQIFRTSFAYRNREFPLENG 120

Query: 140 KALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQSL 199
           KAL+F++ SKQ KTKGGL AGTATTN++R+  +K  ++ +Q + CSP EVIFG DFHQSL
Sbjct: 121 KALEFVFSSKQGKTKGGLAAGTATTNLFRNPNYKTALEELQFKSCSPREVIFGSDFHQSL 180

Query: 200 YCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPSIRAA 259
           YCHLLCGLIFRE+IQ VFSTFAHS+V AFRTFE VWEELCDDIR G LSSRIT PSIR A
Sbjct: 181 YCHLLCGLIFREDIQFVFSTFAHSIVLAFRTFEQVWEELCDDIRNGELSSRITAPSIRTA 240

Query: 260 MSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRHYAGD 319
           MS +LKPN ELADLIH KCSGLSNWYGLIPELFPNAKY+ GIMTGSME YLKKLRHYAG+
Sbjct: 241 MSHLLKPNAELADLIHTKCSGLSNWYGLIPELFPNAKYIYGIMTGSMEPYLKKLRHYAGE 300

Query: 320 LPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKP 379
           LPL+SADYG+SEGWI ANVNP LPPELATFAVLP+IGYFEFIP R        +  EPKP
Sbjct: 301 LPLLSADYGASEGWIAANVNPLLPPELATFAVLPDIGYFEFIPLRRN---GDHIYSEPKP 357

Query: 380 VGLTEVKVGEEYEIIVTNVA 399
           +GL++VK+GEEYEI+VTN A
Sbjct: 358 IGLSDVKIGEEYEILVTNFA 377


>gi|413948630|gb|AFW81279.1| hypothetical protein ZEAMMB73_485956 [Zea mays]
          Length = 623

 Score =  607 bits (1566), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 277/394 (70%), Positives = 334/394 (84%)

Query: 4   KMETVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCV 63
           KM     +E I EFE +T+DA R+Q++TL+KILE NA AEYL   GLNGRTD ES+KSC+
Sbjct: 47  KMPICSCEETIHEFEMLTRDAGRVQKDTLKKILELNADAEYLNKFGLNGRTDVESYKSCI 106

Query: 64  PLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIF 123
           PL  H DL+PYI +I DGD SP+LTGKP+T++S SSGTTQG+PKFLPF DEL+ETTLQIF
Sbjct: 107 PLCVHSDLEPYIHKIADGDSSPLLTGKPVTSLSLSSGTTQGRPKFLPFTDELLETTLQIF 166

Query: 124 RTSYAFRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQC 183
           +TSYAFRNRE+PIG+GKALQFIYGSKQ  TKGG+ A TATTN+YR + +K  MK +QSQC
Sbjct: 167 QTSYAFRNREYPIGRGKALQFIYGSKQVVTKGGILATTATTNLYRRARYKEGMKDIQSQC 226

Query: 184 CSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIR 243
           CSPDEV+FG DFHQSLYCHLLCGLI+ +E+  VFSTFAHSLVHAF+TFE VWE+LC DIR
Sbjct: 227 CSPDEVVFGSDFHQSLYCHLLCGLIYSDEVHQVFSTFAHSLVHAFQTFEEVWEDLCADIR 286

Query: 244 EGVLSSRITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMT 303
           +GVLS ++TVPS+R A++KILKPNPELAD I+KKC+GLSNWYG+IP L+PNAKY+ GIMT
Sbjct: 287 DGVLSEKVTVPSVREAVTKILKPNPELADSIYKKCTGLSNWYGVIPALWPNAKYVYGIMT 346

Query: 304 GSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQ 363
           GSME YLKKLRHYAG LPL+SADYG+SEGW+GAN+NP+LPPE  T+AVLP  GYFEFIP 
Sbjct: 347 GSMEPYLKKLRHYAGHLPLISADYGASEGWVGANINPTLPPEQVTYAVLPQTGYFEFIPL 406

Query: 364 RLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN 397
            + N  S +  +E +PVGLTEV+VG+ YE+++T 
Sbjct: 407 EVENSASSIHYLESEPVGLTEVEVGKTYEVVITT 440


>gi|413948631|gb|AFW81280.1| hypothetical protein ZEAMMB73_485956 [Zea mays]
          Length = 592

 Score =  606 bits (1563), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 277/394 (70%), Positives = 334/394 (84%)

Query: 4   KMETVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCV 63
           KM     +E I EFE +T+DA R+Q++TL+KILE NA AEYL   GLNGRTD ES+KSC+
Sbjct: 16  KMPICSCEETIHEFEMLTRDAGRVQKDTLKKILELNADAEYLNKFGLNGRTDVESYKSCI 75

Query: 64  PLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIF 123
           PL  H DL+PYI +I DGD SP+LTGKP+T++S SSGTTQG+PKFLPF DEL+ETTLQIF
Sbjct: 76  PLCVHSDLEPYIHKIADGDSSPLLTGKPVTSLSLSSGTTQGRPKFLPFTDELLETTLQIF 135

Query: 124 RTSYAFRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQC 183
           +TSYAFRNRE+PIG+GKALQFIYGSKQ  TKGG+ A TATTN+YR + +K  MK +QSQC
Sbjct: 136 QTSYAFRNREYPIGRGKALQFIYGSKQVVTKGGILATTATTNLYRRARYKEGMKDIQSQC 195

Query: 184 CSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIR 243
           CSPDEV+FG DFHQSLYCHLLCGLI+ +E+  VFSTFAHSLVHAF+TFE VWE+LC DIR
Sbjct: 196 CSPDEVVFGSDFHQSLYCHLLCGLIYSDEVHQVFSTFAHSLVHAFQTFEEVWEDLCADIR 255

Query: 244 EGVLSSRITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMT 303
           +GVLS ++TVPS+R A++KILKPNPELAD I+KKC+GLSNWYG+IP L+PNAKY+ GIMT
Sbjct: 256 DGVLSEKVTVPSVREAVTKILKPNPELADSIYKKCTGLSNWYGVIPALWPNAKYVYGIMT 315

Query: 304 GSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQ 363
           GSME YLKKLRHYAG LPL+SADYG+SEGW+GAN+NP+LPPE  T+AVLP  GYFEFIP 
Sbjct: 316 GSMEPYLKKLRHYAGHLPLISADYGASEGWVGANINPTLPPEQVTYAVLPQTGYFEFIPL 375

Query: 364 RLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN 397
            + N  S +  +E +PVGLTEV+VG+ YE+++T 
Sbjct: 376 EVENSASSIHYLESEPVGLTEVEVGKTYEVVITT 409


>gi|115465721|ref|NP_001056460.1| Os05g0586200 [Oryza sativa Japonica Group]
 gi|75123648|sp|Q6I581.1|GH35_ORYSJ RecName: Full=Probable indole-3-acetic acid-amido synthetase GH3.5;
           AltName: Full=Auxin-responsive GH3-like protein 5;
           Short=OsGH3-5
 gi|48843811|gb|AAT47070.1| putative auxin-regulated protein [Oryza sativa Japonica Group]
 gi|113580011|dbj|BAF18374.1| Os05g0586200 [Oryza sativa Japonica Group]
 gi|215701228|dbj|BAG92652.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222632725|gb|EEE64857.1| hypothetical protein OsJ_19714 [Oryza sativa Japonica Group]
          Length = 581

 Score =  606 bits (1563), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 280/400 (70%), Positives = 338/400 (84%), Gaps = 5/400 (1%)

Query: 5   METVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVP 64
           M     +E I EFE +T+DA R+Q++TL+KILE NASAEYLQN GL GRTD ES+KSC+P
Sbjct: 1   MTICSCEETINEFEMLTRDAARVQKDTLKKILEINASAEYLQNFGLGGRTDAESYKSCIP 60

Query: 65  LVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFR 124
           L  H D++PYIQRI+DGD SP++TG+PIT +S SSGTT GKPKF+PFNDEL+ETTLQI+R
Sbjct: 61  LCVHNDIEPYIQRIVDGDTSPVVTGEPITNLSLSSGTTHGKPKFIPFNDELLETTLQIYR 120

Query: 125 TSYAFRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCC 184
           TSYAFRNRE+PIG+GKALQF+YGSKQ  TKGG+ A TATTN+YR   +K  MK +QSQCC
Sbjct: 121 TSYAFRNREYPIGQGKALQFVYGSKQVITKGGILATTATTNLYRRQRYKEGMKDIQSQCC 180

Query: 185 SPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIRE 244
           SPDEVIFGPDFHQSLYCHLLCGLI+ EE+  VFSTFAHSLVHAF+TFE VWE+LC DIR+
Sbjct: 181 SPDEVIFGPDFHQSLYCHLLCGLIYSEEVHSVFSTFAHSLVHAFQTFEEVWEDLCTDIRD 240

Query: 245 GVLSSRITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTG 304
           GVLS ++T PSIR A+SKILKPNPELAD I+KKC GLSNWYG+IP L+PNAKY+ GIMTG
Sbjct: 241 GVLSKKVTAPSIREAVSKILKPNPELADSIYKKCIGLSNWYGVIPALWPNAKYVYGIMTG 300

Query: 305 SMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIP-- 362
           SME YLKKLRHYAG+LPL+SADYG+SEGW+G+N++P++PPE  T+AVLP +GYFEFIP  
Sbjct: 301 SMEPYLKKLRHYAGNLPLISADYGASEGWVGSNIDPTVPPEQVTYAVLPQVGYFEFIPLE 360

Query: 363 QRLGNL---ESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
           + +G      + +  IE  PVGLTEV+VG+ YE+++TN A
Sbjct: 361 KPIGEETENSASIHYIESDPVGLTEVEVGKIYEVVITNFA 400


>gi|125553507|gb|EAY99216.1| hypothetical protein OsI_21174 [Oryza sativa Indica Group]
          Length = 581

 Score =  605 bits (1559), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 279/400 (69%), Positives = 338/400 (84%), Gaps = 5/400 (1%)

Query: 5   METVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVP 64
           M     +E I EFE +T+DA R+Q++TL+KILE NASAEYLQN GL GRTD ES+KSC+P
Sbjct: 1   MTICSCEETINEFEMLTRDAARVQKDTLKKILEINASAEYLQNFGLGGRTDAESYKSCIP 60

Query: 65  LVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFR 124
           L  H D++PYIQRI+DGD SP++TG+PIT +S SSGTT GKPKF+PFNDEL+ETTLQI+R
Sbjct: 61  LCVHNDIEPYIQRIVDGDTSPVVTGEPITNLSLSSGTTHGKPKFIPFNDELLETTLQIYR 120

Query: 125 TSYAFRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCC 184
           TSYAFRNR++PIG+GKALQF+YGSKQ  TKGG+ A TATTN+YR   +K  MK +QSQCC
Sbjct: 121 TSYAFRNRKYPIGQGKALQFVYGSKQVITKGGILATTATTNLYRRQRYKEGMKDIQSQCC 180

Query: 185 SPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIRE 244
           SPDEVIFGPDFHQSLYCHLLCGLI+ EE+  VFSTFAHSLVHAF+TFE VWE+LC DIR+
Sbjct: 181 SPDEVIFGPDFHQSLYCHLLCGLIYSEEVHSVFSTFAHSLVHAFQTFEEVWEDLCTDIRD 240

Query: 245 GVLSSRITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTG 304
           GVLS ++T PSIR A+SKILKPNPELAD I+KKC GLSNWYG+IP L+PNAKY+ GIMTG
Sbjct: 241 GVLSKKVTAPSIREAVSKILKPNPELADSIYKKCIGLSNWYGVIPALWPNAKYVYGIMTG 300

Query: 305 SMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIP-- 362
           SME YLKKLRHYAG+LPL+SADYG+SEGW+G+N++P++PPE  T+AVLP +GYFEFIP  
Sbjct: 301 SMEPYLKKLRHYAGNLPLISADYGASEGWVGSNIDPTVPPEQVTYAVLPQVGYFEFIPLE 360

Query: 363 QRLGNL---ESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
           + +G      + +  IE  PVGLTEV+VG+ YE+++TN A
Sbjct: 361 KPIGEETENSASIHYIESDPVGLTEVEVGKIYEVVITNFA 400


>gi|242089029|ref|XP_002440347.1| hypothetical protein SORBIDRAFT_09g030050 [Sorghum bicolor]
 gi|241945632|gb|EES18777.1| hypothetical protein SORBIDRAFT_09g030050 [Sorghum bicolor]
          Length = 581

 Score =  592 bits (1525), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 279/400 (69%), Positives = 333/400 (83%), Gaps = 9/400 (2%)

Query: 5   METVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVP 64
           M     +E I EFE +T+DA R+Q++TL+KILE NA AEYL+  GLNGRTD ES+KSC+P
Sbjct: 1   MPICSCEETIHEFEMLTRDAGRVQKDTLKKILELNADAEYLKKFGLNGRTDVESYKSCIP 60

Query: 65  LVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFR 124
           L  H DL+PYI RI DGD SP+LTGKP+T++S SSGTTQGKPKFLPF DEL+ETTLQIF+
Sbjct: 61  LCVHSDLEPYIHRIADGDSSPLLTGKPVTSLSLSSGTTQGKPKFLPFTDELLETTLQIFQ 120

Query: 125 TSYAFRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCC 184
           TSYAFRNR++PIG+GKALQFIYGSKQ  TKGG+ A TATTN+YR + +K  MK +QSQCC
Sbjct: 121 TSYAFRNRKYPIGRGKALQFIYGSKQVVTKGGILATTATTNLYRRARYKEGMKDIQSQCC 180

Query: 185 SPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIRE 244
           SPDEV+FGPDF+QSLYCHLLCGLI+ +E+  VFS FAHSLVHAF+TFE VWE+LC DIR 
Sbjct: 181 SPDEVVFGPDFNQSLYCHLLCGLIYSDEVHQVFSPFAHSLVHAFQTFEEVWEDLCADIRG 240

Query: 245 GVLSSRITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTG 304
           GVLS ++TVPSIR A++KILKPNPELADLI+KKC GLSNWYG+IP L+PNAKY+ GIMTG
Sbjct: 241 GVLSEKVTVPSIREAVTKILKPNPELADLIYKKCMGLSNWYGVIPALWPNAKYVYGIMTG 300

Query: 305 SMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQR 364
           SME YLKKLRHYAG LPL+SADYG+SEGW+GAN+NP+LPPE  T+AVLP  GYFEFI  R
Sbjct: 301 SMEPYLKKLRHYAGHLPLISADYGASEGWVGANINPTLPPEQVTYAVLPQTGYFEFI--R 358

Query: 365 LGNLESQ-------VLCIEPKPVGLTEVKVGEEYEIIVTN 397
           L   E +       +  IE +PVGLTEV+VG+ YE+++T 
Sbjct: 359 LEKPEGEETENSASIHYIESEPVGLTEVEVGKIYEVVITT 398


>gi|357132382|ref|XP_003567809.1| PREDICTED: probable indole-3-acetic acid-amido synthetase
           GH3.5-like [Brachypodium distachyon]
          Length = 581

 Score =  587 bits (1512), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 274/401 (68%), Positives = 332/401 (82%), Gaps = 7/401 (1%)

Query: 5   METVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVP 64
           M     +E I EFE +T+DA R+Q++TL+KILE NA A+YL++ GL+GRTD ES+KSC+P
Sbjct: 1   MTICSCEETINEFEMLTRDAGRVQQDTLKKILEVNADADYLRHFGLDGRTDAESYKSCIP 60

Query: 65  LVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFR 124
           L  H +++P+IQR+ DGD    LTGKPIT++S SSGTTQGKPKFLPFNDEL+ETTLQIFR
Sbjct: 61  LCVHSEVEPFIQRVADGDSPRALTGKPITSLSLSSGTTQGKPKFLPFNDELLETTLQIFR 120

Query: 125 TSYAFRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCC 184
           TSYAFRNRE+PI  GKALQF+YGSKQ  TKGG+ A TATTN+YRS  +K  MK ++SQCC
Sbjct: 121 TSYAFRNREYPISNGKALQFVYGSKQVLTKGGILATTATTNLYRSQRYKEGMKDIRSQCC 180

Query: 185 SPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIRE 244
           SPDEVIFGPDFHQSLYCHLLCGLI+ +E+  V STFAHSLVHAF+T E VWE+LC DIR+
Sbjct: 181 SPDEVIFGPDFHQSLYCHLLCGLIYSDEVYSVSSTFAHSLVHAFQTMEEVWEDLCADIRD 240

Query: 245 GVLSSRITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTG 304
           GVLS ++T PSIR AMSKILKPNPELAD IHKKC GLSNWYG+IP L+PNAKY+ GIMTG
Sbjct: 241 GVLSKKVTAPSIREAMSKILKPNPELADSIHKKCVGLSNWYGMIPALWPNAKYVYGIMTG 300

Query: 305 SMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIP-- 362
           SME YLKKLRHYAG LPL+SADYG+SEGW+G+N++P+LPPE  T+AVLP  GYFEFIP  
Sbjct: 301 SMEPYLKKLRHYAGPLPLISADYGASEGWVGSNIDPTLPPEQVTYAVLPQTGYFEFIPLE 360

Query: 363 ----QRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
               + + N  + +  IE +PVGLT+V+VG+ YE+++TN A
Sbjct: 361 KPTGEEMEN-SAAIHYIESEPVGLTDVEVGKIYEVVITNFA 400


>gi|293335843|ref|NP_001167813.1| hypothetical protein [Zea mays]
 gi|223944151|gb|ACN26159.1| unknown [Zea mays]
 gi|413950650|gb|AFW83299.1| hypothetical protein ZEAMMB73_392922 [Zea mays]
          Length = 583

 Score =  583 bits (1504), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 272/400 (68%), Positives = 322/400 (80%), Gaps = 5/400 (1%)

Query: 5   METVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVP 64
           M     +E+I+EFE +T+DA R+Q++TLRKILE N  AEYL    L  RTD +SFKSC+P
Sbjct: 1   MTICSSEEIIDEFELLTRDARRVQQDTLRKILELNGDAEYLNRFNLGRRTDSKSFKSCIP 60

Query: 65  LVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFR 124
           L  H D++ YIQRI DGD SP+LTGKPIT++S SSGTTQGKPKFLPFNDEL+E+T QIFR
Sbjct: 61  LCVHSDIESYIQRIADGDDSPVLTGKPITSLSLSSGTTQGKPKFLPFNDELLESTFQIFR 120

Query: 125 TSYAFRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCC 184
           TSYAFRNRE+PI  GKALQF+YGSKQ  T+GG+ A TATTN+YRS  FK  MK + +QCC
Sbjct: 121 TSYAFRNREYPIVNGKALQFVYGSKQVFTQGGILAATATTNLYRSQRFKEAMKDVMTQCC 180

Query: 185 SPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIRE 244
           SPDEVIFGPDFHQSLYCHLLCGLI  +E+Q VFS FAHSLVHAF + E VWE+LC DIR+
Sbjct: 181 SPDEVIFGPDFHQSLYCHLLCGLINSDEVQFVFSPFAHSLVHAFHSLEEVWEDLCADIRD 240

Query: 245 GVLSSRITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTG 304
           GVLS R+T PSIR A+SKIL+PNPELA  I+ KC  LSNWYG+IP L+PN KY+ GIMTG
Sbjct: 241 GVLSKRVTAPSIRQAVSKILRPNPELASSIYIKCQSLSNWYGVIPTLWPNVKYIYGIMTG 300

Query: 305 SMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQR 364
           SME YLKKLRHYAG LPL+SADYG+SEGW+G+N+NP+LPPE  T+AVLPNI YFEFIP  
Sbjct: 301 SMEPYLKKLRHYAGHLPLLSADYGASEGWVGSNINPTLPPEEVTYAVLPNIAYFEFIPLE 360

Query: 365 LGNLESQVLC-----IEPKPVGLTEVKVGEEYEIIVTNVA 399
               E   +C     IE +PVGLTEV+VG+ YE+++TN A
Sbjct: 361 KPKWEETEICSSVHYIESEPVGLTEVEVGKIYEVVITNFA 400


>gi|242058059|ref|XP_002458175.1| hypothetical protein SORBIDRAFT_03g028240 [Sorghum bicolor]
 gi|241930150|gb|EES03295.1| hypothetical protein SORBIDRAFT_03g028240 [Sorghum bicolor]
          Length = 611

 Score =  579 bits (1493), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 276/410 (67%), Positives = 326/410 (79%), Gaps = 22/410 (5%)

Query: 11  DELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHED 70
           +E+I+EFE +T+DA+R+Q++TLRKILE N  AEYL    L  RTD +SFKSC+PL  H D
Sbjct: 21  EEIIDEFELLTRDAKRVQQDTLRKILELNGDAEYLNRFNLGRRTDSKSFKSCIPLCVHSD 80

Query: 71  LQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFR 130
           ++ YIQRI DGD S +LTGKPIT++S SSGTTQGKPKFLPFNDEL+E+T+QIFRTSYAFR
Sbjct: 81  IESYIQRIADGDDSLVLTGKPITSLSVSSGTTQGKPKFLPFNDELLESTVQIFRTSYAFR 140

Query: 131 NR---------------EFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAE 175
           NR               E+PIG GKALQF+YGSKQ  T+GG+ A TATTN+YRS  FK  
Sbjct: 141 NRVIIQSSKIMFEHTCSEYPIGNGKALQFVYGSKQVFTQGGILATTATTNLYRSRRFKEA 200

Query: 176 MKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVW 235
           MK + SQCCSPDEVIFGPDFHQSLYCHLLCGLI+ +E+Q VFS FAHSLVHAF T E VW
Sbjct: 201 MKDIMSQCCSPDEVIFGPDFHQSLYCHLLCGLIYSDEVQFVFSPFAHSLVHAFHTLEEVW 260

Query: 236 EELCDDIREGVLSSRITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNA 295
           E+LC DIR+GVLS R+T PSIR A+SKIL+PNPELA  I+ KC  LSNWYG+IP L+PNA
Sbjct: 261 EDLCADIRDGVLSKRVTTPSIRQAVSKILRPNPELASSIYIKCQNLSNWYGVIPTLWPNA 320

Query: 296 KYLSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNI 355
           KY+ GIMTGSME YLKKLRHYAG LPLMSADYG+SEGW+G+NVNP+LPPE  T+AVLPNI
Sbjct: 321 KYIYGIMTGSMEPYLKKLRHYAGHLPLMSADYGASEGWVGSNVNPTLPPEEVTYAVLPNI 380

Query: 356 GYFEFIP------QRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
            YFEFIP        + N  S +  IE +PVGLTEV+VG+ YE+++TN A
Sbjct: 381 AYFEFIPLEKTKGDEMEN-SSSIHYIESEPVGLTEVEVGKIYEVVITNFA 429


>gi|334184935|ref|NP_001189757.1| putative auxin-responsive protein [Arabidopsis thaliana]
 gi|330255592|gb|AEC10686.1| putative auxin-responsive protein [Arabidopsis thaliana]
          Length = 586

 Score =  555 bits (1430), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 265/402 (65%), Positives = 327/402 (81%), Gaps = 9/402 (2%)

Query: 1   MLEKMETVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGR-TDPE-S 58
           MLEK+ET D++ +I+EF+ +T++A ++Q++TL++IL +N SA YLQN GLNG  TDPE +
Sbjct: 12  MLEKVETFDMNRVIDEFDEMTRNAHQVQKQTLKEILLKNQSAIYLQNCGLNGNATDPEEA 71

Query: 59  FKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMET 118
           FKS VPLVT  +L+PYI+R++DGD SPILTG P+  IS SSGT+QG+PKF+PF DELME 
Sbjct: 72  FKSMVPLVTDVELEPYIKRMVDGDTSPILTGHPVPAISLSSGTSQGRPKFIPFTDELMEN 131

Query: 119 TLQIFRTSYAFRNREFPIG-KGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMK 177
           TLQ+FRT++AFRNR+FPI   GKALQFI+ SKQ  + GG+  GTATTNVYR+  FKA MK
Sbjct: 132 TLQLFRTAFAFRNRDFPIDDNGKALQFIFSSKQYISTGGVPVGTATTNVYRNPNFKAGMK 191

Query: 178 AMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEE 237
           ++ S  CSPDEVIF PD HQ+LYCHLL G++FR+++Q VF+ FAH LVHAFRTFE VWEE
Sbjct: 192 SITSPSCSPDEVIFSPDVHQALYCHLLSGILFRDQVQYVFAVFAHGLVHAFRTFEQVWEE 251

Query: 238 LCDDIREGVLSSRITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKY 297
           +  DI++GVLS+RITVPS+R AMSK+L PNPELA+ I  KC  LSNWYGLIP LFPNAKY
Sbjct: 252 IVTDIKDGVLSNRITVPSVRTAMSKLLTPNPELAETIRTKCMSLSNWYGLIPALFPNAKY 311

Query: 298 LSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGY 357
           + GIMTGSME Y+ KLRHYAGDLPL+S DYGSSEGWI ANV P L PE ATFAV+PN+GY
Sbjct: 312 VYGIMTGSMEPYVPKLRHYAGDLPLVSHDYGSSEGWIAANVTPRLSPEEATFAVIPNLGY 371

Query: 358 FEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
           FEF+P       S+    E KPVGLT+VK+GEEYE+++TN A
Sbjct: 372 FEFLPV------SETGEGEEKPVGLTQVKIGEEYEVVITNYA 407


>gi|18407057|ref|NP_566071.1| putative auxin-responsive protein [Arabidopsis thaliana]
 gi|30690347|ref|NP_850453.1| putative auxin-responsive protein [Arabidopsis thaliana]
 gi|75206434|sp|Q9SKE2.2|JAR1_ARATH RecName: Full=Jasmonic acid-amido synthetase JAR1; AltName:
           Full=Jasmonate-amino acid synthetase JAR1; AltName:
           Full=Protein FAR-RED INSENSITIVE 219; AltName:
           Full=Protein JASMONATE RESISTANT 1
 gi|9255891|gb|AAF86349.1|AF279129_1 FIN219 [Arabidopsis thaliana]
 gi|20197821|gb|AAD23040.2| putative auxin-responsive protein [Arabidopsis thaliana]
 gi|23297477|gb|AAN12979.1| putative auxin-responsive protein [Arabidopsis thaliana]
 gi|222422969|dbj|BAH19469.1| AT2G46370 [Arabidopsis thaliana]
 gi|330255589|gb|AEC10683.1| putative auxin-responsive protein [Arabidopsis thaliana]
 gi|330255590|gb|AEC10684.1| putative auxin-responsive protein [Arabidopsis thaliana]
          Length = 575

 Score =  555 bits (1429), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 265/402 (65%), Positives = 327/402 (81%), Gaps = 9/402 (2%)

Query: 1   MLEKMETVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGR-TDPE-S 58
           MLEK+ET D++ +I+EF+ +T++A ++Q++TL++IL +N SA YLQN GLNG  TDPE +
Sbjct: 1   MLEKVETFDMNRVIDEFDEMTRNAHQVQKQTLKEILLKNQSAIYLQNCGLNGNATDPEEA 60

Query: 59  FKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMET 118
           FKS VPLVT  +L+PYI+R++DGD SPILTG P+  IS SSGT+QG+PKF+PF DELME 
Sbjct: 61  FKSMVPLVTDVELEPYIKRMVDGDTSPILTGHPVPAISLSSGTSQGRPKFIPFTDELMEN 120

Query: 119 TLQIFRTSYAFRNREFPIG-KGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMK 177
           TLQ+FRT++AFRNR+FPI   GKALQFI+ SKQ  + GG+  GTATTNVYR+  FKA MK
Sbjct: 121 TLQLFRTAFAFRNRDFPIDDNGKALQFIFSSKQYISTGGVPVGTATTNVYRNPNFKAGMK 180

Query: 178 AMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEE 237
           ++ S  CSPDEVIF PD HQ+LYCHLL G++FR+++Q VF+ FAH LVHAFRTFE VWEE
Sbjct: 181 SITSPSCSPDEVIFSPDVHQALYCHLLSGILFRDQVQYVFAVFAHGLVHAFRTFEQVWEE 240

Query: 238 LCDDIREGVLSSRITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKY 297
           +  DI++GVLS+RITVPS+R AMSK+L PNPELA+ I  KC  LSNWYGLIP LFPNAKY
Sbjct: 241 IVTDIKDGVLSNRITVPSVRTAMSKLLTPNPELAETIRTKCMSLSNWYGLIPALFPNAKY 300

Query: 298 LSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGY 357
           + GIMTGSME Y+ KLRHYAGDLPL+S DYGSSEGWI ANV P L PE ATFAV+PN+GY
Sbjct: 301 VYGIMTGSMEPYVPKLRHYAGDLPLVSHDYGSSEGWIAANVTPRLSPEEATFAVIPNLGY 360

Query: 358 FEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
           FEF+P       S+    E KPVGLT+VK+GEEYE+++TN A
Sbjct: 361 FEFLPV------SETGEGEEKPVGLTQVKIGEEYEVVITNYA 396


>gi|392311801|pdb|4EPL|A Chain A, Crystal Structure Of Arabidopsis Thaliana Gh3.11 (Jar1) In
           Complex With Ja-Ile
          Length = 581

 Score =  555 bits (1429), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 265/402 (65%), Positives = 327/402 (81%), Gaps = 9/402 (2%)

Query: 1   MLEKMETVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGR-TDPE-S 58
           MLEK+ET D++ +I+EF+ +T++A ++Q++TL++IL +N SA YLQN GLNG  TDPE +
Sbjct: 7   MLEKVETFDMNRVIDEFDEMTRNAHQVQKQTLKEILLKNQSAIYLQNCGLNGNATDPEEA 66

Query: 59  FKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMET 118
           FKS VPLVT  +L+PYI+R++DGD SPILTG P+  IS SSGT+QG+PKF+PF DELME 
Sbjct: 67  FKSMVPLVTDVELEPYIKRMVDGDTSPILTGHPVPAISLSSGTSQGRPKFIPFTDELMEN 126

Query: 119 TLQIFRTSYAFRNREFPIG-KGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMK 177
           TLQ+FRT++AFRNR+FPI   GKALQFI+ SKQ  + GG+  GTATTNVYR+  FKA MK
Sbjct: 127 TLQLFRTAFAFRNRDFPIDDNGKALQFIFSSKQYISTGGVPVGTATTNVYRNPNFKAGMK 186

Query: 178 AMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEE 237
           ++ S  CSPDEVIF PD HQ+LYCHLL G++FR+++Q VF+ FAH LVHAFRTFE VWEE
Sbjct: 187 SITSPSCSPDEVIFSPDVHQALYCHLLSGILFRDQVQYVFAVFAHGLVHAFRTFEQVWEE 246

Query: 238 LCDDIREGVLSSRITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKY 297
           +  DI++GVLS+RITVPS+R AMSK+L PNPELA+ I  KC  LSNWYGLIP LFPNAKY
Sbjct: 247 IVTDIKDGVLSNRITVPSVRTAMSKLLTPNPELAETIRTKCMSLSNWYGLIPALFPNAKY 306

Query: 298 LSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGY 357
           + GIMTGSME Y+ KLRHYAGDLPL+S DYGSSEGWI ANV P L PE ATFAV+PN+GY
Sbjct: 307 VYGIMTGSMEPYVPKLRHYAGDLPLVSHDYGSSEGWIAANVTPRLSPEEATFAVIPNLGY 366

Query: 358 FEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
           FEF+P       S+    E KPVGLT+VK+GEEYE+++TN A
Sbjct: 367 FEFLPV------SETGEGEEKPVGLTQVKIGEEYEVVITNYA 402


>gi|15292855|gb|AAK92798.1| putative auxin-responsive protein [Arabidopsis thaliana]
          Length = 575

 Score =  555 bits (1429), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 265/402 (65%), Positives = 327/402 (81%), Gaps = 9/402 (2%)

Query: 1   MLEKMETVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGR-TDPE-S 58
           MLEK+ET D++ +I+EF+ +T++A ++Q++TL++IL +N SA YLQN GLNG  TDPE +
Sbjct: 1   MLEKVETFDMNRVIDEFDEMTRNAHQVQKQTLKEILLKNQSAIYLQNCGLNGNATDPEEA 60

Query: 59  FKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMET 118
           FKS VPLVT  +L+PYI+R++DGD SPILTG P+  IS SSGT+QG+PKF+PF DELME 
Sbjct: 61  FKSMVPLVTDVELEPYIKRMVDGDTSPILTGHPVPAISLSSGTSQGRPKFIPFTDELMEN 120

Query: 119 TLQIFRTSYAFRNREFPIG-KGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMK 177
           TLQ+FRT++AFRNR+FPI   GKALQFI+ SKQ  + GG+  GTATTNVYR+  FKA MK
Sbjct: 121 TLQLFRTAFAFRNRDFPIDDNGKALQFIFSSKQYISTGGVPVGTATTNVYRNPNFKAGMK 180

Query: 178 AMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEE 237
           ++ S  CSPDEVIF PD HQ+LYCHLL G++FR+++Q VF+ FAH LVHAFRTFE VWEE
Sbjct: 181 SITSPSCSPDEVIFSPDVHQALYCHLLSGILFRDQVQYVFAVFAHGLVHAFRTFEQVWEE 240

Query: 238 LCDDIREGVLSSRITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKY 297
           +  DI++GVLS+RITVPS+R AMSK+L PNPELA+ I  KC  LSNWYGLIP LFPNAKY
Sbjct: 241 IVTDIKDGVLSNRITVPSVRTAMSKLLTPNPELAETIRTKCMSLSNWYGLIPALFPNAKY 300

Query: 298 LSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGY 357
           + GIMTGSME Y+ KLRHYAGDLPL+S DYGSSEGWI ANV P L PE ATFAV+PN+GY
Sbjct: 301 VYGIMTGSMEPYVPKLRHYAGDLPLVSHDYGSSEGWIAANVTPRLSPEEATFAVIPNLGY 360

Query: 358 FEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
           FEF+P       S+    E KPVGLT+VK+GEEYE+++TN A
Sbjct: 361 FEFLPV------SETGEGEEKPVGLTQVKIGEEYEVVITNYA 396


>gi|297824707|ref|XP_002880236.1| hypothetical protein ARALYDRAFT_483789 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297326075|gb|EFH56495.1| hypothetical protein ARALYDRAFT_483789 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 568

 Score =  551 bits (1420), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 261/402 (64%), Positives = 327/402 (81%), Gaps = 9/402 (2%)

Query: 1   MLEKMETVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRT-DPE-S 58
           MLEK+ET D++ +I+EF+ ++++A+++Q++TL+ IL +N SA YLQN GL+G   DPE +
Sbjct: 1   MLEKVETFDMNRVIDEFDEMSRNADQVQKQTLKDILLKNKSAIYLQNCGLSGNAADPEEA 60

Query: 59  FKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMET 118
           FK+ VPLVT  +L+PYI+R++DGD SPILTG P+  IS SSGT+QG+PKF+PF DELME 
Sbjct: 61  FKAMVPLVTDVELEPYIKRMVDGDTSPILTGHPVPAISLSSGTSQGRPKFIPFTDELMEN 120

Query: 119 TLQIFRTSYAFRNREFPIG-KGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMK 177
           TLQ+FRT++AFRNR+FPI   G+ALQFI+GSKQ  + GG+  GTATTNVYR+  FKA MK
Sbjct: 121 TLQLFRTAFAFRNRDFPIDDNGRALQFIFGSKQYISTGGVPVGTATTNVYRNPNFKAGMK 180

Query: 178 AMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEE 237
           ++ S  CSPDEV+F PD HQ+LYCHLL G++FR+++Q VF+ FAH LVHAFRTFE VWEE
Sbjct: 181 SITSPSCSPDEVVFSPDVHQALYCHLLSGILFRDQVQYVFAVFAHGLVHAFRTFEQVWEE 240

Query: 238 LCDDIREGVLSSRITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKY 297
           +  DI++GVLS+RITVPS+R AMSK+L PNPELA+ I  KC  LSNWYGLIP LFPNAKY
Sbjct: 241 IVTDIKDGVLSNRITVPSVRTAMSKLLTPNPELAETIRSKCMSLSNWYGLIPALFPNAKY 300

Query: 298 LSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGY 357
           + GIMTGSME Y+ KLRHYAGDLPL+S DYGSSEGWI ANV P L PE ATFAV+PN+GY
Sbjct: 301 VYGIMTGSMEPYVPKLRHYAGDLPLVSHDYGSSEGWIAANVTPKLSPEEATFAVIPNLGY 360

Query: 358 FEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
           FEF+P       S+    E KPVGLTEVK+GEEYE+++TN A
Sbjct: 361 FEFLPV------SETGEGEEKPVGLTEVKIGEEYEVVITNYA 396


>gi|326493690|dbj|BAJ85306.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 589

 Score =  551 bits (1419), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 268/405 (66%), Positives = 326/405 (80%), Gaps = 6/405 (1%)

Query: 1   MLEKMETVDVDEL-IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESF 59
           MLEK       E+ I EFE +T+DA+ +Q+ETLR+IL EN + EYLQ LGL GRTDP SF
Sbjct: 1   MLEKKAGEFSGEMVIAEFERLTRDADIVQQETLRRILAENGATEYLQRLGLAGRTDPASF 60

Query: 60  KSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETT 119
           K CVPL TH DL+PYI RI+DGD +PILTGKP+T+IS SSGTTQGK K+L FN+EL+++T
Sbjct: 61  KECVPLATHADLEPYIDRIVDGDATPILTGKPVTSISLSSGTTQGKRKYLLFNEELVKST 120

Query: 120 LQIFRTSYAFRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAM 179
           +QI+RTSYAFRNREFP+  GKALQFIY S+Q  TKGGL A TATTNVYRS  FKA M+ +
Sbjct: 121 MQIYRTSYAFRNREFPVEDGKALQFIYSSRQFTTKGGLTATTATTNVYRSEEFKATMRVV 180

Query: 180 QSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELC 239
           QSQCCSPDEVIFG DF QSLYCHLLCGL+   ++Q+V +TFAHS+V AF+TFE VWEELC
Sbjct: 181 QSQCCSPDEVIFGADFAQSLYCHLLCGLLSAGQVQMVSATFAHSVVVAFQTFERVWEELC 240

Query: 240 DDIREGVLS-SRITVPSIRAAMSKILK-PNPELADLIHKKCSGLSNWYGLIPELFPNAKY 297
            DIR G LS +R+T P++R A+S +L  PNPELAD + +KC+GLSNWYG+IP L+PNAKY
Sbjct: 241 ADIRRGALSPTRVTSPAVRQAVSALLAGPNPELADAVARKCAGLSNWYGVIPALWPNAKY 300

Query: 298 LSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGY 357
           + GIMTGSMEHY+KKLRHYAG LPL++A+YG+SEGWIGANV P++PPE ATF VLP+IGY
Sbjct: 301 VYGIMTGSMEHYVKKLRHYAGGLPLVAAEYGASEGWIGANVEPAVPPESATFTVLPDIGY 360

Query: 358 FEFIPQRLGNLES---QVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
           FEFIP R G   +        E +PVGLT+V VG+ YE+++T  A
Sbjct: 361 FEFIPLRPGCTAAPGPNACYGESEPVGLTDVVVGQHYEVVMTTFA 405


>gi|413947781|gb|AFW80430.1| hypothetical protein ZEAMMB73_980386 [Zea mays]
 gi|413947782|gb|AFW80431.1| hypothetical protein ZEAMMB73_980386 [Zea mays]
          Length = 592

 Score =  530 bits (1364), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 252/398 (63%), Positives = 314/398 (78%), Gaps = 9/398 (2%)

Query: 11  DELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHED 70
           + +I EFE++T+DA  +QR+TLR+IL +NA AEYL+  GL GRTD  SF++CVPL TH D
Sbjct: 14  EAVIAEFESLTRDAAAVQRDTLRRILADNACAEYLRCRGLAGRTDAASFRACVPLATHAD 73

Query: 71  LQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFR 130
           ++PYI RI DGD SP+LT KPIT+IS SSGTTQGK K+LPFN EL+++T+QI+RTSYAFR
Sbjct: 74  IEPYIARIADGDTSPVLTAKPITSISLSSGTTQGKRKYLPFNQELVKSTMQIYRTSYAFR 133

Query: 131 NREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVI 190
           NR FP+  GKALQFIYGS+Q  TKGGL A TATTNVYRS  F   M+A+QSQ CSP+ VI
Sbjct: 134 NRAFPVEDGKALQFIYGSRQFTTKGGLTATTATTNVYRSEEFMPTMRAIQSQVCSPEAVI 193

Query: 191 FGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLS-S 249
           FG DF QSLYCHLLCGL++ +E+++V +TFAHS+V AF+TFE VWEELC DIR G LS +
Sbjct: 194 FGADFAQSLYCHLLCGLLYADEVRIVSATFAHSIVLAFQTFERVWEELCADIRAGALSPA 253

Query: 250 RITVPSIRAAMSKILK-PNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEH 308
           R+  P++R A+  +L  P+P  AD + ++C+GLSNWYG+IP LFPNA+Y+ GIMTG+MEH
Sbjct: 254 RVAAPAVRGAVEALLAGPDPARADEVARRCAGLSNWYGVIPALFPNARYVHGIMTGTMEH 313

Query: 309 YLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQR---- 364
           Y+KKLRHYAG LPL++A+YG+SEGW+GANV P  PPE ATF VLPNI YFEFIP +    
Sbjct: 314 YVKKLRHYAGGLPLVAAEYGASEGWVGANVEPETPPESATFTVLPNIAYFEFIPLKAATG 373

Query: 365 LGNLESQVLC---IEPKPVGLTEVKVGEEYEIIVTNVA 399
            G   +   C    EP+PVGLTEV VGE YE++VT  A
Sbjct: 374 HGGGTAGDTCYAEAEPEPVGLTEVTVGEHYEVVVTTFA 411


>gi|413947780|gb|AFW80429.1| hypothetical protein ZEAMMB73_980386 [Zea mays]
          Length = 639

 Score =  530 bits (1364), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 252/398 (63%), Positives = 314/398 (78%), Gaps = 9/398 (2%)

Query: 11  DELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHED 70
           + +I EFE++T+DA  +QR+TLR+IL +NA AEYL+  GL GRTD  SF++CVPL TH D
Sbjct: 61  EAVIAEFESLTRDAAAVQRDTLRRILADNACAEYLRCRGLAGRTDAASFRACVPLATHAD 120

Query: 71  LQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFR 130
           ++PYI RI DGD SP+LT KPIT+IS SSGTTQGK K+LPFN EL+++T+QI+RTSYAFR
Sbjct: 121 IEPYIARIADGDTSPVLTAKPITSISLSSGTTQGKRKYLPFNQELVKSTMQIYRTSYAFR 180

Query: 131 NREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVI 190
           NR FP+  GKALQFIYGS+Q  TKGGL A TATTNVYRS  F   M+A+QSQ CSP+ VI
Sbjct: 181 NRAFPVEDGKALQFIYGSRQFTTKGGLTATTATTNVYRSEEFMPTMRAIQSQVCSPEAVI 240

Query: 191 FGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLS-S 249
           FG DF QSLYCHLLCGL++ +E+++V +TFAHS+V AF+TFE VWEELC DIR G LS +
Sbjct: 241 FGADFAQSLYCHLLCGLLYADEVRIVSATFAHSIVLAFQTFERVWEELCADIRAGALSPA 300

Query: 250 RITVPSIRAAMSKILK-PNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEH 308
           R+  P++R A+  +L  P+P  AD + ++C+GLSNWYG+IP LFPNA+Y+ GIMTG+MEH
Sbjct: 301 RVAAPAVRGAVEALLAGPDPARADEVARRCAGLSNWYGVIPALFPNARYVHGIMTGTMEH 360

Query: 309 YLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQR---- 364
           Y+KKLRHYAG LPL++A+YG+SEGW+GANV P  PPE ATF VLPNI YFEFIP +    
Sbjct: 361 YVKKLRHYAGGLPLVAAEYGASEGWVGANVEPETPPESATFTVLPNIAYFEFIPLKAATG 420

Query: 365 LGNLESQVLC---IEPKPVGLTEVKVGEEYEIIVTNVA 399
            G   +   C    EP+PVGLTEV VGE YE++VT  A
Sbjct: 421 HGGGTAGDTCYAEAEPEPVGLTEVTVGEHYEVVVTTFA 458


>gi|357128034|ref|XP_003565681.1| PREDICTED: probable indole-3-acetic acid-amido synthetase
           GH3.5-like [Brachypodium distachyon]
          Length = 591

 Score =  523 bits (1347), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 259/408 (63%), Positives = 322/408 (78%), Gaps = 9/408 (2%)

Query: 1   MLEKMETVDV--DELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPES 58
           MLEK    +   +++I EFE +T+DA  +QRETLR+IL ENA+AEYLQ LGL GRTD  S
Sbjct: 1   MLEKKAGSEFSGEKVIAEFERLTRDAANVQRETLRRILGENAAAEYLQKLGLAGRTDAGS 60

Query: 59  FKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMET 118
           F++CVPL TH D +PYI RI DGD SP+LT KP+T+IS SSGTTQGK K+L FN+EL+++
Sbjct: 61  FRACVPLATHADFEPYIDRIADGDDSPVLTAKPVTSISLSSGTTQGKRKYLLFNEELVKS 120

Query: 119 TLQIFRTSYAFRNREFPIGK-GKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMK 177
           T+QI+RTSYAFRNREFP+ K GKALQFIY S++  TKGGL A TATTNVYRS  FKA M+
Sbjct: 121 TMQIYRTSYAFRNREFPVEKGGKALQFIYSSREFTTKGGLTATTATTNVYRSEAFKATMR 180

Query: 178 AMQSQCCSPDEVIFGP---DFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELV 234
            +QSQC SPDEVIF     DF QSLYCHLLCGL  R ++Q V +TFAHS+V AF+TFE V
Sbjct: 181 DVQSQCSSPDEVIFEAATGDFAQSLYCHLLCGLHSRAQVQSVTATFAHSVVLAFQTFERV 240

Query: 235 WEELCDDIREGVLS-SRITVPSIRAAMS-KILKPNPELADLIHKKCSGLSNWYGLIPELF 292
           WEELC DIR G  S +R+T P++R A+S ++ +P+P LAD + + C+GLSNWYG+IP L+
Sbjct: 241 WEELCADIRRGSPSPTRVTSPALRRAVSARLARPDPALADAVGRACAGLSNWYGVIPALW 300

Query: 293 PNAKYLSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVL 352
           PNAKY+ GIMTGSMEHY++KLRHYAG LPL++A+YG+SEGWIGANV+P + PE ATF VL
Sbjct: 301 PNAKYVYGIMTGSMEHYVRKLRHYAGGLPLVAAEYGASEGWIGANVDPGVAPESATFTVL 360

Query: 353 PNIGYFEFIPQRLG-NLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
           P+IG+FEFIP   G +  +   C E +PVGLTEV VGE YE+++T  A
Sbjct: 361 PDIGFFEFIPLGSGCSTTADACCGEEEPVGLTEVVVGEHYEVVMTTFA 408


>gi|218187766|gb|EEC70193.1| hypothetical protein OsI_00935 [Oryza sativa Indica Group]
          Length = 608

 Score =  517 bits (1331), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 254/408 (62%), Positives = 314/408 (76%), Gaps = 11/408 (2%)

Query: 1   MLEKMET-------VDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGR 53
           MLEK  T       V  + +IEEFE +T+DA  +QRETLR+IL EN   EYL+ LGL G 
Sbjct: 1   MLEKKATRSTRVDGVSGEAVIEEFERVTRDAANVQRETLRRILAENGGVEYLRGLGLAGA 60

Query: 54  TDPESFKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFND 113
           TDP +F++ VPL TH DL+PYI RI DGD SP+LT KP T+IS SSGTTQGK K+L FN+
Sbjct: 61  TDPATFRARVPLATHADLEPYIDRIADGDASPVLTAKPATSISLSSGTTQGKRKYLLFNE 120

Query: 114 ELMETTLQIFRTSYAFRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFK 173
           EL+++T+QI+R SYAFRNREFP+  GKALQFIY S++++TKGGL A TATTNVYRS  FK
Sbjct: 121 ELVKSTMQIYRISYAFRNREFPVENGKALQFIYSSRETRTKGGLTATTATTNVYRSEEFK 180

Query: 174 AEMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFEL 233
           A M+ +QSQCCSPDEVIFGPDF QSLYCHLL GL+   ++Q+V +TFAHS+V AF+TFE 
Sbjct: 181 ATMRDIQSQCCSPDEVIFGPDFAQSLYCHLLAGLLAAGDVQIVSATFAHSVVLAFQTFER 240

Query: 234 VWEELCDDIREGVLS-SRITVPSI-RAAMSKILKPNPELADLIHKKCSGLSNWYGLIPEL 291
            WE+LC DIR G +S SR+T P++ RA  + +  PNP LAD + +KC+ LSNWYG+IP L
Sbjct: 241 AWEDLCADIRRGEVSPSRVTSPAVRRAMAALLAAPNPGLADEVARKCAALSNWYGVIPAL 300

Query: 292 FPNAKYLSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAV 351
           +PNA+Y+ GIMTGSMEHY+KKLRHYAG LPL++A+YG+SEGW+GANV P  PPE ATF V
Sbjct: 301 WPNARYVYGIMTGSMEHYVKKLRHYAGGLPLVAAEYGASEGWVGANVEPGTPPERATFTV 360

Query: 352 LPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
           LP+I YFEFIP  L  +       E +PVGLTEV  GE YE+++T  A
Sbjct: 361 LPDIAYFEFIP--LKPVAGDGGYAEAEPVGLTEVAAGELYEVVMTTFA 406


>gi|222617999|gb|EEE54131.1| hypothetical protein OsJ_00914 [Oryza sativa Japonica Group]
          Length = 591

 Score =  516 bits (1329), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 254/408 (62%), Positives = 314/408 (76%), Gaps = 11/408 (2%)

Query: 1   MLEKMET-------VDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGR 53
           MLEK  T       V  + +IEEFE +T+DA  +QRETLR+IL EN   EYL+ LGL G 
Sbjct: 1   MLEKKATRSTRVDGVSGEAVIEEFERVTRDAANVQRETLRRILAENGGVEYLRGLGLAGA 60

Query: 54  TDPESFKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFND 113
           TDP +F++ VPL TH DL+PYI RI DGD SP+LT KP T+IS SSGTTQGK K+L FN+
Sbjct: 61  TDPATFRARVPLATHADLEPYIDRIADGDASPVLTAKPATSISLSSGTTQGKRKYLLFNE 120

Query: 114 ELMETTLQIFRTSYAFRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFK 173
           EL+++T+QI+R SYAFRNREFP+  GKALQFIY S++++TKGGL A TATTNVYRS  FK
Sbjct: 121 ELVKSTMQIYRISYAFRNREFPVENGKALQFIYSSRETRTKGGLTATTATTNVYRSEEFK 180

Query: 174 AEMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFEL 233
           A M+ +QSQCCSPDEVIFGPDF QSLYCHLL GL+   ++Q+V +TFAHS+V AF+TFE 
Sbjct: 181 ATMRDIQSQCCSPDEVIFGPDFAQSLYCHLLAGLLAAGDVQIVSATFAHSVVLAFQTFER 240

Query: 234 VWEELCDDIREGVLS-SRITVPSI-RAAMSKILKPNPELADLIHKKCSGLSNWYGLIPEL 291
            WE+LC DIR G +S SR+T P++ RA  + +  PNP LAD + +KC+ LSNWYG+IP L
Sbjct: 241 AWEDLCADIRRGEVSPSRVTSPAVRRAMAALLAAPNPGLADEVARKCAALSNWYGVIPAL 300

Query: 292 FPNAKYLSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAV 351
           +PNA+Y+ GIMTGSMEHY+KKLRHYAG LPL++A+YG+SEGW+GANV P  PPE ATF V
Sbjct: 301 WPNARYVYGIMTGSMEHYVKKLRHYAGGLPLVAAEYGASEGWVGANVEPGTPPERATFTV 360

Query: 352 LPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
           LP+I YFEFIP  L  +       E +PVGLTEV  GE YE+++T  A
Sbjct: 361 LPDIAYFEFIP--LKPVAGDGGYAEAEPVGLTEVAAGELYEVVMTTFA 406


>gi|115435344|ref|NP_001042430.1| Os01g0221100 [Oryza sativa Japonica Group]
 gi|82592859|sp|Q5NAZ7.2|GH33_ORYSJ RecName: Full=Probable indole-3-acetic acid-amido synthetase GH3.3;
           AltName: Full=Auxin-responsive GH3-like protein 3;
           Short=OsGH3-3
 gi|113531961|dbj|BAF04344.1| Os01g0221100 [Oryza sativa Japonica Group]
          Length = 462

 Score =  515 bits (1327), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 254/408 (62%), Positives = 314/408 (76%), Gaps = 11/408 (2%)

Query: 1   MLEKMET-------VDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGR 53
           MLEK  T       V  + +IEEFE +T+DA  +QRETLR+IL EN   EYL+ LGL G 
Sbjct: 1   MLEKKATRSTRVDGVSGEAVIEEFERVTRDAANVQRETLRRILAENGGVEYLRGLGLAGA 60

Query: 54  TDPESFKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFND 113
           TDP +F++ VPL TH DL+PYI RI DGD SP+LT KP T+IS SSGTTQGK K+L FN+
Sbjct: 61  TDPATFRARVPLATHADLEPYIDRIADGDASPVLTAKPATSISLSSGTTQGKRKYLLFNE 120

Query: 114 ELMETTLQIFRTSYAFRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFK 173
           EL+++T+QI+R SYAFRNREFP+  GKALQFIY S++++TKGGL A TATTNVYRS  FK
Sbjct: 121 ELVKSTMQIYRISYAFRNREFPVENGKALQFIYSSRETRTKGGLTATTATTNVYRSEEFK 180

Query: 174 AEMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFEL 233
           A M+ +QSQCCSPDEVIFGPDF QSLYCHLL GL+   ++Q+V +TFAHS+V AF+TFE 
Sbjct: 181 ATMRDIQSQCCSPDEVIFGPDFAQSLYCHLLAGLLAAGDVQIVSATFAHSVVLAFQTFER 240

Query: 234 VWEELCDDIREGVLS-SRITVPSI-RAAMSKILKPNPELADLIHKKCSGLSNWYGLIPEL 291
            WE+LC DIR G +S SR+T P++ RA  + +  PNP LAD + +KC+ LSNWYG+IP L
Sbjct: 241 AWEDLCADIRRGEVSPSRVTSPAVRRAMAALLAAPNPGLADEVARKCAALSNWYGVIPAL 300

Query: 292 FPNAKYLSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAV 351
           +PNA+Y+ GIMTGSMEHY+KKLRHYAG LPL++A+YG+SEGW+GANV P  PPE ATF V
Sbjct: 301 WPNARYVYGIMTGSMEHYVKKLRHYAGGLPLVAAEYGASEGWVGANVEPGTPPERATFTV 360

Query: 352 LPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
           LP+I YFEFIP  L  +       E +PVGLTEV  GE YE+++T  A
Sbjct: 361 LPDIAYFEFIP--LKPVAGDGGYAEAEPVGLTEVAAGELYEVVMTTFA 406


>gi|242051561|ref|XP_002454926.1| hypothetical protein SORBIDRAFT_03g001490 [Sorghum bicolor]
 gi|241926901|gb|EES00046.1| hypothetical protein SORBIDRAFT_03g001490 [Sorghum bicolor]
          Length = 603

 Score =  515 bits (1326), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 250/397 (62%), Positives = 311/397 (78%), Gaps = 8/397 (2%)

Query: 11  DELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHED 70
           + +I EFE++T+DA  +QR+TLR+IL +NA+AEYL+  GL GRTD  SF++CVPL TH D
Sbjct: 26  EAVIAEFESLTRDAAAVQRDTLRRILGDNATAEYLRCRGLAGRTDAASFRACVPLATHAD 85

Query: 71  LQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFR 130
           ++PYI RI DGD S +LT  PIT+IS SSGTTQGK K+LPFN EL+++T+QI+RTSYAFR
Sbjct: 86  IEPYITRIADGDTSALLTANPITSISLSSGTTQGKRKYLPFNQELVKSTMQIYRTSYAFR 145

Query: 131 NREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVI 190
           NR FP+  GKALQFIYGS+Q  T GGL A TATTNVYRS  F   M+A+QSQ CSP+ VI
Sbjct: 146 NRAFPVEDGKALQFIYGSRQFTTTGGLTATTATTNVYRSEEFMPTMRAIQSQVCSPEAVI 205

Query: 191 FGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLS-S 249
           FG DF QSLYCHLLCGL++ +E+++V +TFAHSLV AF+TFE VWE+LC DIR G LS +
Sbjct: 206 FGADFAQSLYCHLLCGLLYADEVRIVSATFAHSLVLAFQTFERVWEDLCADIRAGSLSQT 265

Query: 250 RITVPSIRAAMSKILK-PNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEH 308
           R+T P++R A+  +L  PNP LAD + ++C+GLSNWYG+IP LFPNA+Y+ GIMTGSMEH
Sbjct: 266 RVTAPAVRRAVEALLTGPNPALADEVVRRCAGLSNWYGVIPALFPNARYVHGIMTGSMEH 325

Query: 309 YLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRL--- 365
           Y+KKLRHYAG LPL++A+YG+SEGW+GANV P  PPE  TF VLPNI YFEFIP +    
Sbjct: 326 YVKKLRHYAGGLPLVAAEYGASEGWVGANVEPETPPESVTFTVLPNIAYFEFIPLKATSC 385

Query: 366 ---GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
              G  +      E +PVGLTEV VGE YE++VT  A
Sbjct: 386 CHGGADDDDTSYAEAEPVGLTEVAVGEHYEVVVTTFA 422


>gi|414875688|tpg|DAA52819.1| TPA: hypothetical protein ZEAMMB73_321561 [Zea mays]
          Length = 604

 Score =  500 bits (1288), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 234/405 (57%), Positives = 306/405 (75%), Gaps = 17/405 (4%)

Query: 12  ELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDL 71
           ++I EFE +T+DA  +Q ETLR+IL+ENA  EYLQ LGL+GRTDP++F++CVPL TH+DL
Sbjct: 16  QVIAEFERLTRDAAAVQPETLRRILDENAGVEYLQGLGLDGRTDPDTFRACVPLATHDDL 75

Query: 72  QPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRN 131
           +PYI R+ DGD SP+LT KPIT+IS SSGTTQG+ K+LPFNDEL + T+ ++RTS+AFRN
Sbjct: 76  EPYIARLADGDTSPVLTAKPITSISLSSGTTQGRRKYLPFNDELFKLTMHVYRTSFAFRN 135

Query: 132 REFPI-GKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVI 190
           R FP+ G GKALQF+YGS+Q  TKGGL   +ATT++YR+  +KA ++ +Q  CCSPDEV+
Sbjct: 136 RAFPVEGGGKALQFVYGSRQLTTKGGLTVASATTHLYRNEGYKAAVRGIQLPCCSPDEVV 195

Query: 191 FGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLS-S 249
           F  DF QSLYCHLLCGL++ +E++ VF+ F H+LV A +T E  WEELC DIR G LS +
Sbjct: 196 FAADFAQSLYCHLLCGLLYADEVRTVFAVFGHNLVLALQTLERAWEELCHDIRRGALSPA 255

Query: 250 RITVPSIRAAMSKIL-KPNPELADLIHKKC--SGLSNWYGLIPELFPNAKYLSGIMTGSM 306
           R+T P +R A+S +L KPNP LAD + ++C  + L  W GL+  L+PNA+Y+  I+TGSM
Sbjct: 256 RVTEPELRQAVSALLAKPNPALADEVARRCAEARLGGWRGLVHALWPNARYVHTIVTGSM 315

Query: 307 EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRL- 365
           EHY++KLRHYAG LPL++ DYG+SEG +GANV P +PP+ ATFAVLPNI YFEFIP +  
Sbjct: 316 EHYVRKLRHYAGGLPLVAMDYGASEGMVGANVEPEVPPDSATFAVLPNIAYFEFIPLKTT 375

Query: 366 --GNLESQVLCIE---------PKPVGLTEVKVGEEYEIIVTNVA 399
             G   S+  C +           PVGLTEV VGE YE+++T  A
Sbjct: 376 TNGGGGSRADCTDTGGTSYSSGADPVGLTEVTVGEHYEVVMTTFA 420


>gi|56783930|dbj|BAD81367.1| putative Nt-gh3 deduced protein [Oryza sativa Japonica Group]
          Length = 623

 Score =  499 bits (1286), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 254/440 (57%), Positives = 314/440 (71%), Gaps = 43/440 (9%)

Query: 1   MLEKMET-------VDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGR 53
           MLEK  T       V  + +IEEFE +T+DA  +QRETLR+IL EN   EYL+ LGL G 
Sbjct: 1   MLEKKATRSTRVDGVSGEAVIEEFERVTRDAANVQRETLRRILAENGGVEYLRGLGLAGA 60

Query: 54  TDPESFKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISR---------------- 97
           TDP +F++ VPL TH DL+PYI RI DGD SP+LT KP T+IS                 
Sbjct: 61  TDPATFRARVPLATHADLEPYIDRIADGDASPVLTAKPATSISLRSVSPPAAACCSLTSI 120

Query: 98  ----------------SSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFPIGKGKA 141
                           SSGTTQGK K+L FN+EL+++T+QI+R SYAFRNREFP+  GKA
Sbjct: 121 ENVADHGGDHLTAGACSSGTTQGKRKYLLFNEELVKSTMQIYRISYAFRNREFPVENGKA 180

Query: 142 LQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQSLYC 201
           LQFIY S++++TKGGL A TATTNVYRS  FKA M+ +QSQCCSPDEVIFGPDF QSLYC
Sbjct: 181 LQFIYSSRETRTKGGLTATTATTNVYRSEEFKATMRDIQSQCCSPDEVIFGPDFAQSLYC 240

Query: 202 HLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLS-SRITVPSI-RAA 259
           HLL GL+   ++Q+V +TFAHS+V AF+TFE  WE+LC DIR G +S SR+T P++ RA 
Sbjct: 241 HLLAGLLAAGDVQIVSATFAHSVVLAFQTFERAWEDLCADIRRGEVSPSRVTSPAVRRAM 300

Query: 260 MSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRHYAGD 319
            + +  PNP LAD + +KC+ LSNWYG+IP L+PNA+Y+ GIMTGSMEHY+KKLRHYAG 
Sbjct: 301 AALLAAPNPGLADEVARKCAALSNWYGVIPALWPNARYVYGIMTGSMEHYVKKLRHYAGG 360

Query: 320 LPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKP 379
           LPL++A+YG+SEGW+GANV P  PPE ATF VLP+I YFEFIP  L  +       E +P
Sbjct: 361 LPLVAAEYGASEGWVGANVEPGTPPERATFTVLPDIAYFEFIP--LKPVAGDGGYAEAEP 418

Query: 380 VGLTEVKVGEEYEIIVTNVA 399
           VGLTEV  GE YE+++T  A
Sbjct: 419 VGLTEVAAGELYEVVMTTFA 438


>gi|414875689|tpg|DAA52820.1| TPA: hypothetical protein ZEAMMB73_902003 [Zea mays]
          Length = 596

 Score =  498 bits (1282), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 241/397 (60%), Positives = 302/397 (76%), Gaps = 7/397 (1%)

Query: 10  VDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHE 69
            +E+I +FE +T+DA  +QRETLR+IL +NA AEYL+ LGL GRTDP+SF++CVPL TH 
Sbjct: 14  AEEVIAKFERLTRDAAAVQRETLRRILADNAGAEYLRGLGLGGRTDPDSFRACVPLATHA 73

Query: 70  DLQPYIQRIID-GDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYA 128
           D++PYI RI D GD S +LT  P+T+IS SSGTTQGK K+L FND+L +  +Q  +TS+A
Sbjct: 74  DMEPYIARIADEGDTSHVLTATPVTSISLSSGTTQGKRKYLLFNDDLFKCAMQTGQTSFA 133

Query: 129 FRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDE 188
           FRNR FP+  GK+LQFIY S+Q KTKGGL A TATTNVYR   FKA M+  QS+CCSP E
Sbjct: 134 FRNRAFPVEDGKSLQFIYASRQFKTKGGLTATTATTNVYRHRDFKAHMRHTQSECCSPSE 193

Query: 189 VIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLS 248
           V+F PDF +SLYCHLLCGL+  ++++ V +TFAHSLV AFRTFE VWEELC DIR GV S
Sbjct: 194 VLFCPDFAESLYCHLLCGLVLADDVRTVSATFAHSLVLAFRTFERVWEELCADIRHGVPS 253

Query: 249 -SRITVPSIRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSM 306
            +R+T P++R A+S +L  PNP LAD + ++C GL NW G+IP L+P A+Y+S I+TGSM
Sbjct: 254 PTRVTSPAVRRAVSALLVAPNPALADEVARRCRGLVNWRGVIPALWPRARYVSSIVTGSM 313

Query: 307 EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLG 366
           EHY+KKLRHYAG LPL++ DYG++EG I ANV P  PPE ATFAVLPNI YFEFIP  L 
Sbjct: 314 EHYVKKLRHYAGALPLVALDYGATEGMIAANVEPREPPESATFAVLPNIAYFEFIPLSLR 373

Query: 367 NLE----SQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
             +    +     E  PVGLT+V VGE YE+++T  A
Sbjct: 374 GCDVAGAADARYTEADPVGLTDVAVGEHYEVVMTTFA 410


>gi|242055935|ref|XP_002457113.1| hypothetical protein SORBIDRAFT_03g001500 [Sorghum bicolor]
 gi|241929088|gb|EES02233.1| hypothetical protein SORBIDRAFT_03g001500 [Sorghum bicolor]
          Length = 601

 Score =  494 bits (1272), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 234/412 (56%), Positives = 309/412 (75%), Gaps = 15/412 (3%)

Query: 3   EKMETVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSC 62
           +K     V+E+I EFE +T +A  +QRETLR+IL+ENA  EYLQ  GL GR+DP++F++C
Sbjct: 4   KKAGEFSVEEVIAEFERLTLNAAAVQRETLRRILDENAGVEYLQRHGLAGRSDPDTFRAC 63

Query: 63  VPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSG-TTQGKPKFLPFNDELMETTLQ 121
           VPL TH+DL+P+I R+ DGD SP+LT KPIT+IS SSG TTQGK K+LPFNDEL + T+ 
Sbjct: 64  VPLATHDDLEPFIVRVADGDTSPVLTAKPITSISLSSGTTTQGKRKYLPFNDELFKLTMH 123

Query: 122 IFRTSYAFRNREFPI-GKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQ 180
           ++RTS+AFRNR FP+ G GKALQF+YGS+Q  TKGGL A TATT++YR+  ++A ++ +Q
Sbjct: 124 VYRTSFAFRNRAFPVEGGGKALQFVYGSRQFTTKGGLTAATATTHLYRNEEYRAAVRDIQ 183

Query: 181 SQCCSPDEVIF-GPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELC 239
             CCSPDEV+F   D  QSLYCHLLCGL+F +E++ VF+ F H+LV AF+T E VWEELC
Sbjct: 184 LPCCSPDEVVFVAADLAQSLYCHLLCGLLFADEVRTVFAMFGHNLVLAFQTLERVWEELC 243

Query: 240 DDIREGVLS-SRITVPSIRAAMSKILK-PNPELADLIHKKC--SGLSNWYGLIPELFPNA 295
            DIR G LS +R+  P++R A+S +L  PNP LAD + ++C  + L+ W G++P L+PNA
Sbjct: 244 HDIRHGALSPARVAEPALRQAVSALLAPPNPALADEVARRCAEARLNGWRGVVPALWPNA 303

Query: 296 KYLSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNI 355
           +Y+  I+TGSMEHY++K+RHYAG LPL++ DYG+SEG +GANV P +PP+ ATFAVLPNI
Sbjct: 304 RYVHTIVTGSMEHYVRKIRHYAGGLPLVAMDYGASEGMVGANVEPEVPPDSATFAVLPNI 363

Query: 356 GYFEFIPQRLGNLESQVLC--------IEPKPVGLTEVKVGEEYEIIVTNVA 399
            YFEFIP +  +      C         E  PVGLTEV VGE YE+++T  A
Sbjct: 364 AYFEFIPLKTNDGGGGAACTDTGTSYNTEADPVGLTEVTVGEHYEVVMTTFA 415


>gi|227206310|dbj|BAH57210.1| AT2G46370 [Arabidopsis thaliana]
          Length = 520

 Score =  482 bits (1241), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 227/335 (67%), Positives = 272/335 (81%), Gaps = 7/335 (2%)

Query: 66  VTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRT 125
           VT  +L+PYI+R++DGD SPILTG P+  IS SSGT+QG+PKF+PF DELME TLQ+FRT
Sbjct: 13  VTDVELEPYIKRMVDGDTSPILTGHPVPAISLSSGTSQGRPKFIPFTDELMENTLQLFRT 72

Query: 126 SYAFRNREFPIG-KGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCC 184
           ++AFRNR+FPI   GKALQFI+ SKQ  + GG+  GTATTNVYR+  FKA MK++ S  C
Sbjct: 73  AFAFRNRDFPIDDNGKALQFIFSSKQYISTGGVPVGTATTNVYRNPNFKAGMKSITSPSC 132

Query: 185 SPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIRE 244
           SPDEVIF PD HQ+LYCHLL G++FR+++Q VF+ FAH LVHAFRTFE VWEE+  DI++
Sbjct: 133 SPDEVIFSPDVHQALYCHLLSGILFRDQVQYVFAVFAHGLVHAFRTFEQVWEEIVTDIKD 192

Query: 245 GVLSSRITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTG 304
           GVLS+RITVPS+R AMSK+L PNPELA+ I  KC  LSNWYGLIP LFPNAKY+ GIMTG
Sbjct: 193 GVLSNRITVPSVRTAMSKLLTPNPELAETIRTKCMSLSNWYGLIPALFPNAKYVYGIMTG 252

Query: 305 SMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQR 364
           SME Y+ KLRHYAGDLPL+S DYGSSEGWI ANV P L PE ATFAV+PN+GYFEF+P  
Sbjct: 253 SMEPYVPKLRHYAGDLPLVSHDYGSSEGWIAANVTPRLSPEEATFAVIPNLGYFEFLPV- 311

Query: 365 LGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
                S+    E KPVGLT+VK+GEEYE+++TN A
Sbjct: 312 -----SETGEGEEKPVGLTQVKIGEEYEVVITNYA 341


>gi|145331421|ref|NP_001078069.1| putative auxin-responsive protein [Arabidopsis thaliana]
 gi|330255591|gb|AEC10685.1| putative auxin-responsive protein [Arabidopsis thaliana]
          Length = 496

 Score =  467 bits (1201), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 220/323 (68%), Positives = 262/323 (81%), Gaps = 7/323 (2%)

Query: 78  IIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFPIG 137
           ++DGD SPILTG P+  IS SSGT+QG+PKF+PF DELME TLQ+FRT++AFRNR+FPI 
Sbjct: 1   MVDGDTSPILTGHPVPAISLSSGTSQGRPKFIPFTDELMENTLQLFRTAFAFRNRDFPID 60

Query: 138 -KGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFH 196
             GKALQFI+ SKQ  + GG+  GTATTNVYR+  FKA MK++ S  CSPDEVIF PD H
Sbjct: 61  DNGKALQFIFSSKQYISTGGVPVGTATTNVYRNPNFKAGMKSITSPSCSPDEVIFSPDVH 120

Query: 197 QSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPSI 256
           Q+LYCHLL G++FR+++Q VF+ FAH LVHAFRTFE VWEE+  DI++GVLS+RITVPS+
Sbjct: 121 QALYCHLLSGILFRDQVQYVFAVFAHGLVHAFRTFEQVWEEIVTDIKDGVLSNRITVPSV 180

Query: 257 RAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRHY 316
           R AMSK+L PNPELA+ I  KC  LSNWYGLIP LFPNAKY+ GIMTGSME Y+ KLRHY
Sbjct: 181 RTAMSKLLTPNPELAETIRTKCMSLSNWYGLIPALFPNAKYVYGIMTGSMEPYVPKLRHY 240

Query: 317 AGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIE 376
           AGDLPL+S DYGSSEGWI ANV P L PE ATFAV+PN+GYFEF+P       S+    E
Sbjct: 241 AGDLPLVSHDYGSSEGWIAANVTPRLSPEEATFAVIPNLGYFEFLPV------SETGEGE 294

Query: 377 PKPVGLTEVKVGEEYEIIVTNVA 399
            KPVGLT+VK+GEEYE+++TN A
Sbjct: 295 EKPVGLTQVKIGEEYEVVITNYA 317


>gi|75269829|sp|Q53P49.1|GH312_ORYSJ RecName: Full=Probable indole-3-acetic acid-amido synthetase
           GH3.12; AltName: Full=Auxin-responsive GH3-like protein
           12; Short=OsGH3-12
 gi|62734233|gb|AAX96342.1| probable GH3-like protein [imported] - Arabidopsis thaliana [Oryza
           sativa Japonica Group]
 gi|77549019|gb|ABA91816.1| GH3 auxin-responsive promoter family protein [Oryza sativa Japonica
           Group]
          Length = 613

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 216/420 (51%), Positives = 278/420 (66%), Gaps = 23/420 (5%)

Query: 1   MLEK----METVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDP 56
           MLEK    + + + +E++  FE  T+DA  +QRETLR+IL ENA  EYL+ LGL G TD 
Sbjct: 1   MLEKEGKLIMSREDEEIMAWFERTTRDAADVQRETLRRILAENAGVEYLRELGLAGLTDA 60

Query: 57  ESFKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELM 116
            SF++ VP+VTH DL PYIQR+ DGD SP+LT KP+T IS SSGTTQGK K L FND+L+
Sbjct: 61  GSFRARVPVVTHADLDPYIQRVADGDASPVLTAKPVTAISLSSGTTQGKRKRLLFNDDLL 120

Query: 117 ETTLQIFRTSYAFRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEM 176
            ++++ F  SYAF NR FP+  G+ LQF+YGS+   TKGGL A T  TN+ RS  F A M
Sbjct: 121 RSSIRFFHASYAFTNRAFPVEDGRVLQFMYGSRHETTKGGLTATTVMTNLLRSEEFTASM 180

Query: 177 KAMQS---QCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFEL 233
            A        CSP EV+F PDF +SLYCHLLCGL+   E++ V ++FAHS+V A +  E 
Sbjct: 181 AARSRPRLPSCSPSEVVFSPDFDESLYCHLLCGLLLAGEVRAVSASFAHSIVVALQALER 240

Query: 234 VWEELCDDIREGVLS-SRITVPSIRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPEL 291
           VW ELC DIR G  S +R+T P++R A++ IL  PNP LAD + ++C+ L +W G+IP L
Sbjct: 241 VWRELCADIRRGAASPARVTTPAVRRAVAPILAAPNPALADALERRCAALGDWSGVIPAL 300

Query: 292 FPNAKYLSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAV 351
           +PNA+Y+   MTGSMEHY+KKLRHYAG +PL+S +Y SSEG IG N     PPE   F V
Sbjct: 301 WPNARYVQATMTGSMEHYVKKLRHYAGGVPLVSGNYASSEGVIGINAEQHAPPESVVFTV 360

Query: 352 LPNIGYFEFIPQR--------------LGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN 397
           LP+  YFEFIP +                     V   +  PVGLT+V VGE YE+++T 
Sbjct: 361 LPDAAYFEFIPLKPPCTDAAADDDNPAAAGSSCYVDADDANPVGLTDVVVGEHYEVVMTT 420


>gi|125533674|gb|EAY80222.1| hypothetical protein OsI_35399 [Oryza sativa Indica Group]
          Length = 613

 Score =  434 bits (1115), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 215/420 (51%), Positives = 276/420 (65%), Gaps = 23/420 (5%)

Query: 1   MLEK----METVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDP 56
           MLEK    + + + +E++  FE  T+DA  +QRETLR+IL ENA  EYL+ LGL G TD 
Sbjct: 1   MLEKEGKLIMSREDEEIMAWFERTTRDAADVQRETLRRILAENAGVEYLRELGLAGLTDA 60

Query: 57  ESFKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELM 116
            SF++ VP+VTH DL PYIQR+ DGD SP+LT KP+T IS SSGTTQGK K L FND+L+
Sbjct: 61  GSFRARVPVVTHADLDPYIQRVADGDASPVLTAKPVTAISLSSGTTQGKRKRLLFNDDLL 120

Query: 117 ETTLQIFRTSYAFRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEM 176
            ++++ F  SYAF NR FP+  G+ LQF+YGS+   TKG L A T  TN+ RS  F A M
Sbjct: 121 RSSIRFFHASYAFTNRAFPVEDGRVLQFMYGSRHETTKGRLTATTVMTNLLRSEEFTAYM 180

Query: 177 KAMQS---QCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFEL 233
            A        CSP EVIF PDF +SLYCHLLCGL+   E++ V ++FAH +V A +  E 
Sbjct: 181 AARSRPRLPSCSPSEVIFSPDFDESLYCHLLCGLLLAGEVRAVSASFAHGIVVALQALER 240

Query: 234 VWEELCDDIREGVLS-SRITVPSIRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPEL 291
           VW ELC DIR G  S +R+T P++R A++ IL  PNP LAD + ++C+ L +W G+IP L
Sbjct: 241 VWRELCADIRRGAASPARVTTPAVRRAVAPILAAPNPALADALERRCAALGDWSGVIPAL 300

Query: 292 FPNAKYLSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAV 351
           +PNA+Y+   MTGSMEHY+KKLRHYAG +PL+S +Y SSEG IG N     PPE   F V
Sbjct: 301 WPNARYVQATMTGSMEHYVKKLRHYAGGVPLVSGNYASSEGVIGINAEQHAPPESVVFTV 360

Query: 352 LPNIGYFEFIPQR--------------LGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN 397
           LP+  YFEFIP +                     V   +  PVGLT+V VGE YE+++T 
Sbjct: 361 LPDAAYFEFIPLKPPCTDAADDDDNPAAAGSSCYVDADDANPVGLTDVVVGEHYEVVMTT 420


>gi|225447231|ref|XP_002272560.1| PREDICTED: probable indole-3-acetic acid-amido synthetase GH3.5
           [Vitis vinifera]
 gi|297739258|emb|CBI28909.3| unnamed protein product [Vitis vinifera]
          Length = 592

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 214/399 (53%), Positives = 286/399 (71%), Gaps = 13/399 (3%)

Query: 12  ELIEEFETITKDAERIQRETLRKILEENASAEYLQN-LGLNGRTDPES------FKSCVP 64
           E+I  FE ++++   +Q +TL +ILE N+  EYL+  LG     + E+      + S VP
Sbjct: 14  EIIGWFEDVSENTGYVQTQTLCRILELNSGVEYLKKWLGDINVQEMEASALESLYTSLVP 73

Query: 65  LVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFR 124
           L +H DL+ YIQRI DGD SPILT +PITT+S SSGTT+G+ K++PF     +TTLQIF+
Sbjct: 74  LASHADLETYIQRIADGDTSPILTNQPITTLSLSSGTTEGRQKYVPFTRHSSQTTLQIFQ 133

Query: 125 TSYAFRNREFPIGKGKA-LQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQC 183
            + A+R+R +PI  G+  L+FIY SKQ KTKGGL AGTATT+ + S  FK + +  +S  
Sbjct: 134 LAAAYRSRVYPITPGRRILEFIYSSKQFKTKGGLIAGTATTHYFASEEFKIKQEKTKSFT 193

Query: 184 CSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIR 243
           CSP+EVI   D+ QS YCHLL GL F +E++ + STFA+S+V AFRTFE +W  +C DIR
Sbjct: 194 CSPEEVISSGDYKQSTYCHLLLGLHFHDEVEFITSTFAYSIVQAFRTFEELWRNICSDIR 253

Query: 244 EGVLSSRITVPSIRAAMSKILKPNPELADLIHKKCSGL--SNWYGLIPELFPNAKYLSGI 301
           EG++SSRI++P +R A+S I+ PNP LA  I   C  L   +W+GLIP+L+PNAKY+  I
Sbjct: 254 EGIVSSRISLPKVRKAVSDIISPNPGLASWIEASCKELEDKDWFGLIPKLWPNAKYVYSI 313

Query: 302 MTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFI 361
           MTGSM+ YLKKLRHYAGDLPL+SADYGS+E WIGAN++PS PPE  TFAV+P   YFEFI
Sbjct: 314 MTGSMQPYLKKLRHYAGDLPLVSADYGSTESWIGANIDPSSPPENVTFAVIPTFSYFEFI 373

Query: 362 P--QRLGNLESQV-LCIEPKPVGLTEVKVGEEYEIIVTN 397
           P  ++  N  S +   IE +PV L++VK+G+EYEI++T 
Sbjct: 374 PLYRQNQNCSSSIDDFIEDEPVPLSQVKIGQEYEIVLTT 412


>gi|297809793|ref|XP_002872780.1| hypothetical protein ARALYDRAFT_911862 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297318617|gb|EFH49039.1| hypothetical protein ARALYDRAFT_911862 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 591

 Score =  407 bits (1045), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 209/410 (50%), Positives = 285/410 (69%), Gaps = 17/410 (4%)

Query: 5   METVDVD--ELIEEFETITKDAERIQRETLRKILEENASAEYLQN-LG------LNGRTD 55
           METV+    ++I  FE ++++A ++Q ETLR+ILE N+  EYL+  LG      ++  T 
Sbjct: 1   METVEAGHVDVIGWFEHVSENACKVQSETLRRILELNSGVEYLRKWLGTVDVEKMDDYTL 60

Query: 56  PESFKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDEL 115
              F S VP+V+H DL PYIQRI DG+ SP+LT +PIT +S SSGTT+G+ K++PF    
Sbjct: 61  ETLFTSLVPIVSHADLDPYIQRIADGETSPLLTQEPITVLSLSSGTTEGRQKYVPFTRHS 120

Query: 116 METTLQIFRTSYAFRNREFPIGKG-KALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKA 174
            +TTLQIFR S A+R+R +PI +G + L+FIY  K+ KT GGL  GTATT+ Y S  FK 
Sbjct: 121 AQTTLQIFRLSAAYRSRYYPIREGGRILEFIYAGKEFKTLGGLTVGTATTHYYASEEFKT 180

Query: 175 EMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELV 234
           + +  +S  CSP EVI G DF Q  YCHLL GL +  +++ V S F++++V AF  FE +
Sbjct: 181 KQETTKSFTCSPKEVITGGDFGQCTYCHLLLGLHYSSQVEFVASAFSYTIVQAFSFFEEI 240

Query: 235 WEELCDDIREGVLSSRITVPSIRAAMSKILKPNPELADLIHKKCSGLSN---WYGLIPEL 291
           W E+C DI+EG LSSRIT+P +R A+  +++PNP LA  I + C+ L +   W GLIP+L
Sbjct: 241 WREICADIKEGNLSSRITLPKMRKAVLTLIRPNPSLASHIEEVCTELESNLGWLGLIPKL 300

Query: 292 FPNAKYLSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAV 351
           +PNAK++S IMTGSM  YL KLRHYAG LPL+SADYGS+E WIG NV+P+LPPE  +FAV
Sbjct: 301 WPNAKFISSIMTGSMLPYLNKLRHYAGGLPLVSADYGSTESWIGVNVDPNLPPEDVSFAV 360

Query: 352 LPNIGYFEFIP----QRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN 397
           +P   YFEFIP    Q   ++ S    +E KPV L++VK+G+EYE+++T 
Sbjct: 361 IPTFSYFEFIPLYRRQNQSDICSDGDFVEEKPVPLSQVKLGQEYELVLTT 410


>gi|346680625|gb|AEO45116.1| indole-3-acetic acid-amido synthetase GH3.5 [Betula platyphylla]
          Length = 590

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 208/399 (52%), Positives = 279/399 (69%), Gaps = 13/399 (3%)

Query: 11  DELIEEFETITKDAERIQRETLRKILEENASAEYL-QNLGLNGRTDPES------FKSCV 63
           +++I+ FE ++++A ++Q +TLR+ILE N   EYL Q LG     D ++      F S V
Sbjct: 11  NDIIDWFEHLSENAGQVQTQTLRRILELNHGVEYLKQWLGDININDMDACALESLFTSMV 70

Query: 64  PLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIF 123
           PL +H D +PYIQRI DGD SP LT +P+TT+S SSGTT+GK K++PF     +TTLQI 
Sbjct: 71  PLASHADFEPYIQRIADGDTSPSLTQQPMTTLSLSSGTTEGKQKYVPFTRHSAQTTLQIL 130

Query: 124 RTSYAFRNREFPIGKG-KALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQ 182
           R   A+R+R +PI +G + L+ IY SKQ KTKGGL  GTATT+ Y S  FK + +  +S 
Sbjct: 131 RLGAAYRSRVYPIREGGRILELIYSSKQFKTKGGLAVGTATTHYYASEEFKIKQEITKSF 190

Query: 183 CCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDI 242
            CSP+EVI   D+ QS YCHLL GL F  +++ + STFA+S+V AF  FE  W+++C+DI
Sbjct: 191 TCSPEEVISSGDYKQSTYCHLLLGLFFSNQVEFITSTFAYSIVMAFSAFEENWKDICNDI 250

Query: 243 REGVLSSRITVPSIRAAMSKILKPNPELADLIHKKCSGLS--NWYGLIPELFPNAKYLSG 300
           REG LS RI +P +R ++ KI+ P+P LA  I   C  L   NW GLIP+L+PNAKY+  
Sbjct: 251 REGNLSPRINLPKMRKSVLKIISPDPFLASKIEGCCEELQNLNWGGLIPKLWPNAKYVCS 310

Query: 301 IMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEF 360
           I+TGSM+ YLKKLRHYAG+LPL+SADYGS+E WIG NV+PSLPPE  T+AV+P   Y+EF
Sbjct: 311 ILTGSMQGYLKKLRHYAGELPLVSADYGSTESWIGVNVDPSLPPEKVTYAVIPTFSYYEF 370

Query: 361 IP---QRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVT 396
           IP   Q+ G +       E +PV L++VKVG+EYEI++T
Sbjct: 371 IPLYRQKQGCISPIDDLAEDEPVPLSKVKVGQEYEIVLT 409


>gi|15236304|ref|NP_192249.1| auxin-responsive GH3 family protein [Arabidopsis thaliana]
 gi|4206194|gb|AAD11582.1| GH3-like protein [Arabidopsis thaliana]
 gi|4262168|gb|AAD14468.1| putative GH3-like protein [Arabidopsis thaliana]
 gi|7270210|emb|CAB77825.1| putative GH3-like protein [Arabidopsis thaliana]
 gi|16649143|gb|AAL24423.1| GH3-like protein [Arabidopsis thaliana]
 gi|23197706|gb|AAN15380.1| GH3-like protein [Arabidopsis thaliana]
 gi|332656914|gb|AEE82314.1| auxin-responsive GH3 family protein [Arabidopsis thaliana]
          Length = 591

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 210/411 (51%), Positives = 283/411 (68%), Gaps = 19/411 (4%)

Query: 5   METVDV--DELIEEFETITKDAERIQRETLRKILEENASAEYLQN-LG------LNGRTD 55
           METV+   D++I  FE ++++A ++Q ETLR+ILE N+  EYL+  LG      ++  T 
Sbjct: 1   METVEAGHDDVIGWFEHVSENACKVQSETLRRILELNSGVEYLRKWLGTVDVEKMDDYTL 60

Query: 56  PESFKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDEL 115
              F S VP+V+H DL PYIQRI DG+ SP+LT +PIT +S SSGTT+G+ K++PF    
Sbjct: 61  ETLFTSLVPIVSHADLDPYIQRIADGETSPLLTQEPITVLSLSSGTTEGRQKYVPFTRHS 120

Query: 116 METTLQIFRTSYAFRNREFPIGKG-KALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKA 174
            +TTLQIFR S A+R+R +PI +G + L+FIY  K+ KT GGL  GTATT+ Y S  FK 
Sbjct: 121 AQTTLQIFRLSAAYRSRFYPIREGGRILEFIYAGKEFKTLGGLTVGTATTHYYASEEFKT 180

Query: 175 EMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELV 234
           + +  +S  CSP EVI G DF Q  YCHLL GL +  +++ V S F++++V AF  FE +
Sbjct: 181 KQETTKSFTCSPQEVISGGDFGQCTYCHLLLGLHYSSQVEFVASAFSYTIVQAFSFFEEI 240

Query: 235 WEELCDDIREGVLSSRITVPSIRAAMSKILKPNPELADLIHKKCSGLSN---WYGLIPEL 291
           W E+C DI+EG LSSRIT+P +R A+  +++PNP LA  I + C  L     W+GLI +L
Sbjct: 241 WREICADIKEGNLSSRITLPKMRKAVLALIRPNPSLASHIEEICLELETNLGWFGLISKL 300

Query: 292 FPNAKYLSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAV 351
           +PNAK++S IMTGSM  YL KLRHYAG LPL+SADYGS+E WIG NV+P LPPE  +FAV
Sbjct: 301 WPNAKFISSIMTGSMLPYLNKLRHYAGGLPLVSADYGSTESWIGVNVDPHLPPEDVSFAV 360

Query: 352 LPNIGYFEFIPQRLGNLESQVLCI-----EPKPVGLTEVKVGEEYEIIVTN 397
           +P   YFEFIP      +S + CI     E KPV L++VK+G+EYE+++T 
Sbjct: 361 IPTFSYFEFIPLYRRQNQSDI-CIDGDFVEDKPVPLSQVKLGQEYELVLTT 410


>gi|304281947|gb|ADM21185.1| dwarf in light 2 [Arabidopsis thaliana]
          Length = 591

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 210/411 (51%), Positives = 283/411 (68%), Gaps = 19/411 (4%)

Query: 5   METVDV--DELIEEFETITKDAERIQRETLRKILEENASAEYLQN-LG------LNGRTD 55
           METV+   D++I  FE ++++A ++Q ETLR+ILE N+  EYL+  LG      ++  T 
Sbjct: 1   METVEAGHDDVIGWFEHVSENACKVQSETLRRILELNSGVEYLRKWLGTVDVEKMHDYTL 60

Query: 56  PESFKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDEL 115
              F S VP+V+H DL PYIQRI DG+ SP+LT +PIT +S SSGTT+G+ K++PF    
Sbjct: 61  ETLFTSLVPIVSHADLDPYIQRIADGETSPLLTQEPITVLSLSSGTTEGRQKYVPFTRHS 120

Query: 116 METTLQIFRTSYAFRNREFPIGKG-KALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKA 174
            +TTLQIFR S A+R+R +PI +G + L+FIY  K+ KT GGL  GTATT+ Y S  FK 
Sbjct: 121 AQTTLQIFRLSAAYRSRFYPIREGGRILEFIYAGKEFKTLGGLTVGTATTHYYASEEFKT 180

Query: 175 EMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELV 234
           + +  +S  CSP EVI G DF Q  YCHLL GL +  +++ V S F++++V AF  FE +
Sbjct: 181 KQETTKSFTCSPQEVISGGDFGQCTYCHLLLGLHYSSQVEFVASAFSYTIVQAFSFFEEI 240

Query: 235 WEELCDDIREGVLSSRITVPSIRAAMSKILKPNPELADLIHKKCSGLSN---WYGLIPEL 291
           W E+C DI+EG LSSRIT+P +R A+  +++PNP LA  I + C  L     W+GLI +L
Sbjct: 241 WREICADIKEGNLSSRITLPKMRKAVLALIRPNPSLASHIEEICLELETNLGWFGLISKL 300

Query: 292 FPNAKYLSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAV 351
           +PNAK++S IMTGSM  YL KLRHYAG LPL+SADYGS+E WIG NV+P LPPE  +FAV
Sbjct: 301 WPNAKFISSIMTGSMLPYLNKLRHYAGGLPLVSADYGSTESWIGVNVDPHLPPEDVSFAV 360

Query: 352 LPNIGYFEFIPQRLGNLESQVLCI-----EPKPVGLTEVKVGEEYEIIVTN 397
           +P   YFEFIP      +S + CI     E KPV L++VK+G+EYE+++T 
Sbjct: 361 IPTFSYFEFIPLYRRQNQSDI-CIDGDFVEDKPVPLSQVKLGQEYELVLTT 410


>gi|224127132|ref|XP_002329408.1| GH3 family protein [Populus trichocarpa]
 gi|222870458|gb|EEF07589.1| GH3 family protein [Populus trichocarpa]
          Length = 595

 Score =  404 bits (1038), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 208/400 (52%), Positives = 275/400 (68%), Gaps = 14/400 (3%)

Query: 12  ELIEEFETITKDAERIQRETLRKILEENASAEYLQN-LGLNGRTDPES------FKSCVP 64
           ++I  FE I++ A ++Q ETLR+IL+ N   EYL+  LG     D ++      + S VP
Sbjct: 15  DIIGWFEDISEKAGQVQTETLRRILDLNWGVEYLKKWLGDIDVRDMDASALESLYTSLVP 74

Query: 65  LVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFR 124
           L +H DL+P+I RI DGD +P+LT +PIT +S SSGTT+G+ K++PF D    TTLQIF 
Sbjct: 75  LASHADLEPFINRIADGDTAPLLTQQPITLLSLSSGTTEGRQKYVPFTDHSARTTLQIFS 134

Query: 125 TSYAFRNREFPIGKG-KALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQC 183
            + A+R+R +PI +G + L+FIY SKQ KTKGGL  GTATT+ Y S  FK + +  +   
Sbjct: 135 LAAAYRSRVYPIREGGRILEFIYSSKQFKTKGGLTVGTATTHYYASEEFKIKQEKTKCFT 194

Query: 184 CSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIR 243
           CSP EVI G D+ QS YCHLL GL F ++++ + STFA+S+V AFR FE VW E+CDDI+
Sbjct: 195 CSPPEVISGGDYKQSTYCHLLLGLYFGDQVEFITSTFAYSIVQAFRAFEDVWREICDDIK 254

Query: 244 EGVLSSRI-TVPSIRAAMSKILKPNPELADLIHKKCSGLS--NWYGLIPELFPNAKYLSG 300
           +G LS R+ T+P +R A+  I+ PNP LA  I + C  L   NW GLI +L+PNAKY+  
Sbjct: 255 QGTLSERVLTLPKMRKAVLAIISPNPSLASRIEESCKELETLNWLGLITKLWPNAKYVYS 314

Query: 301 IMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEF 360
           IMTGSM+ Y KKLRHYAG L L+SADYGS+E WIGANV+P LPPE  TFAV+P   YFEF
Sbjct: 315 IMTGSMQPYFKKLRHYAGGLALVSADYGSTESWIGANVDPYLPPEDVTFAVIPTFSYFEF 374

Query: 361 IPQRLGNLESQVLC---IEPKPVGLTEVKVGEEYEIIVTN 397
           +P    N +        IE +PV L++VKVG+EYEI++T 
Sbjct: 375 MPLYRENQDCSSAIDDFIEDEPVPLSKVKVGQEYEIVLTT 414


>gi|255553847|ref|XP_002517964.1| Indole-3-acetic acid-amido synthetase GH3.5, putative [Ricinus
           communis]
 gi|223542946|gb|EEF44482.1| Indole-3-acetic acid-amido synthetase GH3.5, putative [Ricinus
           communis]
          Length = 600

 Score =  403 bits (1036), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 206/399 (51%), Positives = 276/399 (69%), Gaps = 13/399 (3%)

Query: 12  ELIEEFETITKDAERIQRETLRKILEENASAEYLQN-LG------LNGRTDPESFKSCVP 64
           ++I  F+ ++++A ++Q  TLR+ILE N   EYL+  LG      ++       + S VP
Sbjct: 22  DIIRWFDDVSENAGKVQTGTLRRILELNCGVEYLKKWLGDIKIQEMDACALESLYTSLVP 81

Query: 65  LVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFR 124
           L +H DL PYIQRI DGD +P+LT +PI T+S SSGTT+G+ K++PF     +TTLQIF 
Sbjct: 82  LASHADLDPYIQRIADGDTTPLLTQQPIATLSLSSGTTEGRQKYVPFTRHSSQTTLQIFS 141

Query: 125 TSYAFRNREFPIGKG-KALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQC 183
            + A+R+R +PI +G K L+ IY SKQ KTKGGL  GTATT+ Y S  FK + +  +S  
Sbjct: 142 LAAAYRSRVYPIKEGGKILELIYSSKQFKTKGGLTVGTATTHYYASEEFKIKQEKTKSFT 201

Query: 184 CSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIR 243
           CSP EVI G D+ Q+ YCHLL GL F ++++ + STFA+S+V AF +FE +W+E+CDDIR
Sbjct: 202 CSPPEVISGGDYKQTTYCHLLLGLFFYDQVEFITSTFAYSIVQAFISFEELWKEICDDIR 261

Query: 244 EGVLSSRITVPSIRAAMSKILKPNPELADLIHKKCSGLSN--WYGLIPELFPNAKYLSGI 301
           EG LSSRIT+P +R A+  I+ P+P LA  I   C  L N  W GLIP+L+PNAKY+  I
Sbjct: 262 EGSLSSRITLPKMRKAVLDIISPSPCLASRIEDNCKKLENLDWLGLIPKLWPNAKYVYSI 321

Query: 302 MTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFI 361
           MTGSM+ YL+KLRHYA  L L+SADYGS+E WIG NV+PSLPPE  TFAV+P   YFEF+
Sbjct: 322 MTGSMQPYLRKLRHYACGLALVSADYGSTESWIGVNVDPSLPPENVTFAVVPTFSYFEFM 381

Query: 362 PQRLGNLESQVLC---IEPKPVGLTEVKVGEEYEIIVTN 397
           P    N +        IE +PV L++VK+G+EYEI++T 
Sbjct: 382 PLYRQNKDFSSAIDDFIEDEPVPLSKVKLGQEYEIVLTT 420


>gi|356544912|ref|XP_003540891.1| PREDICTED: probable indole-3-acetic acid-amido synthetase
           GH3.5-like [Glycine max]
          Length = 613

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 201/398 (50%), Positives = 272/398 (68%), Gaps = 13/398 (3%)

Query: 12  ELIEEFETITKDAERIQRETLRKILEENASAEYLQN-------LGLNGRTDPESFKSCVP 64
           ++I  FE ++++A  +Q + L +IL++N   EYL+        L ++       F S VP
Sbjct: 29  DIISWFEDVSQNAGFVQTQLLFQILKQNYGVEYLKKWLGSYNILEMDACALESLFSSVVP 88

Query: 65  LVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFR 124
           L +H D +P+IQRI DGD +P+LT +PITT+S SSGTT+G+ KF+PF     +TTLQIF 
Sbjct: 89  LASHADFEPFIQRIADGDTAPLLTQQPITTLSLSSGTTEGRQKFVPFTRHSAQTTLQIFT 148

Query: 125 TSYAFRNREFPIGKG-KALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQC 183
            + A+R+R +PI +G + L+FIY S + KTKGGL  GTATT+ Y S  F  +    +S  
Sbjct: 149 LAAAYRSRIYPIRQGGRILEFIYSSNRFKTKGGLTVGTATTHYYASEEFNIKQHKTKSFT 208

Query: 184 CSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIR 243
           CSP EVI G D+ QS YCHLL GL F ++++ + S F +S+V AF TFE +W E+C+DIR
Sbjct: 209 CSPQEVISGGDYKQSTYCHLLLGLFFSDQVEFITSAFIYSMVQAFTTFEELWREICNDIR 268

Query: 244 EGVLSSRITVPSIRAAMSKILKPNPELADLIHKKCSGLS--NWYGLIPELFPNAKYLSGI 301
           +G LSSRI  P +R A+  I+ PNP LA  +   C GL   +W+GLIP+L+PNAKY+  I
Sbjct: 269 DGTLSSRIKSPKMRKAVLDIISPNPNLAAKLEDACKGLEVVDWFGLIPKLWPNAKYVYSI 328

Query: 302 MTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFI 361
           MTGSM+ YLKKLRHYA  LPL+SADYGS+E WIG NV+PSLPPE  TFAV+P   YFEFI
Sbjct: 329 MTGSMQPYLKKLRHYANGLPLVSADYGSTESWIGVNVDPSLPPEDVTFAVVPTFSYFEFI 388

Query: 362 P--QRLGNLES-QVLCIEPKPVGLTEVKVGEEYEIIVT 396
           P  +   N  S     IE KP+ L+++KVG+EYE+++T
Sbjct: 389 PLHRNEKNFSSGGDDFIEDKPIPLSQIKVGQEYEVVLT 426


>gi|118487591|gb|ABK95621.1| unknown [Populus trichocarpa]
          Length = 595

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 206/399 (51%), Positives = 268/399 (67%), Gaps = 13/399 (3%)

Query: 12  ELIEEFETITKDAERIQRETLRKILEENASAEYLQN-LGLNGRTDPES------FKSCVP 64
           ++I  FE I+K A ++Q ETLR+ILE N   EYL   LG     D ++      + S VP
Sbjct: 16  DIISWFEDISKKAGQVQTETLRRILELNWGVEYLNKWLGDINIQDMDASALESLYTSLVP 75

Query: 65  LVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFR 124
             +H DL+PYI RI DGD  P+LT +PIT +S SSGTT G+ KF+PF D    TTLQIF 
Sbjct: 76  PASHADLEPYISRIADGDTVPLLTKQPITLLSLSSGTTDGRQKFVPFTDHSARTTLQIFS 135

Query: 125 TSYAFRNREFPIGKG-KALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQC 183
            + A+R+R +P  +G + L+FIY SKQ KTKGGL AGTATT+ Y S  FK + +  +   
Sbjct: 136 LAAAYRSRVYPTREGGRILEFIYSSKQFKTKGGLTAGTATTHYYASEEFKIKQEKTKCFT 195

Query: 184 CSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIR 243
           CSP EVI G D+ QS YCHLL GL F ++++ + STFA+S+V AF  FE VW ++C+DI+
Sbjct: 196 CSPQEVISGGDYEQSTYCHLLLGLFFCDQVEFITSTFAYSIVQAFTAFEDVWRDICNDIK 255

Query: 244 EGVLSSRITVPSIRAAMSKILKPNPELADLIHKKCSGL--SNWYGLIPELFPNAKYLSGI 301
            G LS RI +  +R A+  I+ PNP LA  I + C  L   NW GLI +L+PN+KY+  I
Sbjct: 256 HGTLSERINLAKMRKAVLSIISPNPSLASKIEENCKELETQNWLGLITKLWPNSKYVYSI 315

Query: 302 MTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFI 361
           MTGSM+ YL+KLRHYAG LPL+SADYGS+E WIGANV+P LPPE  TFAV+P   Y+EF+
Sbjct: 316 MTGSMQPYLQKLRHYAGGLPLVSADYGSTESWIGANVDPYLPPEDVTFAVIPTFSYYEFM 375

Query: 362 PQRLGNLESQVLC---IEPKPVGLTEVKVGEEYEIIVTN 397
           P    N          IE +PV L++VKVG+EYEI++T 
Sbjct: 376 PLYRENHYCGSAIDDFIEDEPVPLSKVKVGQEYEIVLTT 414


>gi|224124584|ref|XP_002319368.1| GH3 family protein [Populus trichocarpa]
 gi|222857744|gb|EEE95291.1| GH3 family protein [Populus trichocarpa]
          Length = 595

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 205/399 (51%), Positives = 266/399 (66%), Gaps = 13/399 (3%)

Query: 12  ELIEEFETITKDAERIQRETLRKILEENASAEYLQN-LGLNGRTDPES------FKSCVP 64
           ++I  FE I+K A ++Q ETLR+ILE N   EYL   LG     D ++      + S VP
Sbjct: 16  DIISWFEDISKKAGQVQTETLRRILELNWGVEYLNKWLGDINIQDMDASALESLYTSLVP 75

Query: 65  LVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFR 124
             +H DL+PYI RI DGD  P+LT +PIT +S SSGTT G+ KF+PF D    TTLQIF 
Sbjct: 76  PASHADLEPYISRIADGDTVPLLTKQPITLLSLSSGTTDGRQKFVPFTDHSARTTLQIFS 135

Query: 125 TSYAFRNREFPIGKG-KALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQC 183
            + A+R+R +P  +G + L+FIY SKQ KTKGGL AGTATT+ Y S  FK + +  +   
Sbjct: 136 LAAAYRSRVYPTREGGRILEFIYSSKQFKTKGGLTAGTATTHYYASEEFKIKQEKTKCFT 195

Query: 184 CSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIR 243
           CSP EVI G D+ QS YCHLL GL F ++++ + STFA+S+V AF  FE VW ++C+DI+
Sbjct: 196 CSPQEVICGGDYEQSTYCHLLLGLFFCDQVEFITSTFAYSIVQAFTAFEDVWRDICNDIK 255

Query: 244 EGVLSSRITVPSIRAAMSKILKPNPELADLIHKKCSGL--SNWYGLIPELFPNAKYLSGI 301
            G LS RI +  +R A+  I+ PNP LA  I + C  L   NW GLI +L+PN+KY+  I
Sbjct: 256 HGTLSERINLAKMRKAVLSIISPNPSLASKIEENCKELETQNWLGLITKLWPNSKYVYSI 315

Query: 302 MTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFI 361
           MTGSM+ Y KKLRHYAG L L+SADYGS+E WIGANV+P LPPE  TFAV+P   Y+EF+
Sbjct: 316 MTGSMQPYFKKLRHYAGGLALVSADYGSTESWIGANVDPYLPPEDVTFAVIPTFSYYEFM 375

Query: 362 PQRLGNLESQVLC---IEPKPVGLTEVKVGEEYEIIVTN 397
           P    N          IE +PV L++VKVG+EYEI++T 
Sbjct: 376 PLYRENHYCGSAIDDFIEDEPVPLSKVKVGQEYEIVLTT 414


>gi|356542133|ref|XP_003539525.1| PREDICTED: probable indole-3-acetic acid-amido synthetase
           GH3.5-like [Glycine max]
          Length = 653

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 202/406 (49%), Positives = 272/406 (66%), Gaps = 18/406 (4%)

Query: 7   TVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQN-LGLNGRTDPES------F 59
           T D D +I  FE ++K+A  +Q +TL KIL++N   EYL+  LG    ++ ++      F
Sbjct: 69  TTDFD-IITWFEDVSKNAGSVQIQTLCKILKQNYGVEYLKTWLGSYNISEMDACALESLF 127

Query: 60  KSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETT 119
            S VPL +H D +PYIQ+I DGD  PILT +PITT+S SSGTT+G+ KF+PF     +TT
Sbjct: 128 TSVVPLASHADFEPYIQKIADGDTGPILTQQPITTLSLSSGTTEGRQKFVPFTRHSAQTT 187

Query: 120 LQIFRTSYAFRNREFPIGKG-KALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKA 178
           LQ F  + A+R+R +P  +G + L+FIY S Q KTKGGL  GTATT+ Y S  FK + + 
Sbjct: 188 LQTFTLAAAYRSRVYPTREGGRILEFIYSSNQFKTKGGLKVGTATTHYYASEEFKTKQEK 247

Query: 179 MQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEEL 238
            ++  CSP EVI G D+ QS YCHLL GL F + ++ + S FA+ +V AF TFE VW +L
Sbjct: 248 TKAFTCSPYEVISGGDYKQSTYCHLLLGLFFSDHVEFISSAFAYGIVQAFCTFEEVWRDL 307

Query: 239 CDDIREGVLSSRITVPSIRAAMSKILKPNPELADLIHKKCSGLS--NWYGLIPELFPNAK 296
           C+DIR+G LSSRI +P +R A+   +  NP LA  + + C  L   +W+GL+P+L+PNAK
Sbjct: 308 CNDIRDGTLSSRIKLPQMREAVLGTITSNPSLASKLEEACLELEVVDWFGLVPKLWPNAK 367

Query: 297 YLSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIG 356
           YL  IMTGSM+ YLKKLRHYA  +PL+SADYGS+E WIG NV+P L PE  TFAV+P   
Sbjct: 368 YLYSIMTGSMQPYLKKLRHYANGVPLISADYGSTESWIGVNVDPCLAPEKVTFAVVPTFS 427

Query: 357 YFEFIP------QRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVT 396
           YFEFIP      Q   ++      +E +P+ L++VKVG+EYEI +T
Sbjct: 428 YFEFIPLYYRQKQDFSSVADHDF-MEDEPIPLSQVKVGQEYEIALT 472


>gi|356515202|ref|XP_003526290.1| PREDICTED: probable indole-3-acetic acid-amido synthetase
           GH3.5-like [Glycine max]
          Length = 611

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 196/400 (49%), Positives = 271/400 (67%), Gaps = 17/400 (4%)

Query: 12  ELIEEFETITKDAERIQRETLRKILEENASAEYLQN-------LGLNGRTDPESFKSCVP 64
           +++  FE ++++A  +Q + L +ILE+N   EYL+        L ++       F S VP
Sbjct: 26  DVMNWFEDLSQNAGFVQTQLLCQILEQNYGVEYLKKWLGSYNILEMDACALESLFSSVVP 85

Query: 65  LVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFR 124
           L +H D +P++QRI DGD +P+LT +PITT+S SSGTT+G+ KF+PF     +TTLQIF 
Sbjct: 86  LASHADFEPFMQRIADGDTTPLLTQQPITTLSLSSGTTEGRQKFVPFTRHSAQTTLQIFT 145

Query: 125 TSYAFRNREFPIGKG-KALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQC 183
            + A+R+R +PI +G + L+FIY S + KTKGGL  GTATT+ Y S  FK +    +S  
Sbjct: 146 LAAAYRSRVYPIREGGRVLEFIYSSNRFKTKGGLTVGTATTHYYASEEFKIKQHKTKSFT 205

Query: 184 CSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIR 243
           CSP EVI G D+ QS YCHLL GL F ++++ + S F +S+V AF TFE +W E+C+DIR
Sbjct: 206 CSPQEVISGGDYKQSTYCHLLLGLYFSDQVEFITSAFIYSMVQAFTTFEELWREICNDIR 265

Query: 244 EGVLSSRITVPSIRAAMSKILKPNPELADLIHKKCSGLS--NWYGLIPELFPNAKYLSGI 301
           +G LSSRI    +R A   I+ P+P LA  +   C  L   +W+GLIP+L+PNAKY+  I
Sbjct: 266 DGTLSSRIKSSKMRKAALDIISPSPNLASKLEDSCKELEGVDWFGLIPKLWPNAKYVYSI 325

Query: 302 MTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFI 361
           MTGSM+ YLKKLRHYA  LPL+SA+YGS+E WIG NV+PSLPPE  TFAV+P   YFEFI
Sbjct: 326 MTGSMQPYLKKLRHYANGLPLVSAEYGSTESWIGVNVDPSLPPEDVTFAVVPTFSYFEFI 385

Query: 362 PQRLGNLESQVLC-----IEPKPVGLTEVKVGEEYEIIVT 396
           P  L   E ++       +E KP+ L+++KVG+EYE+++T
Sbjct: 386 P--LHRHEKKLSSGGDDFMEDKPIPLSQIKVGQEYEVVLT 423


>gi|356547024|ref|XP_003541918.1| PREDICTED: probable indole-3-acetic acid-amido synthetase
           GH3.5-like [Glycine max]
          Length = 599

 Score =  379 bits (974), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 192/401 (47%), Positives = 266/401 (66%), Gaps = 17/401 (4%)

Query: 12  ELIEEFETITKDAERIQRETLRKILEENASAEYLQN-LG------LNGRTDPESFKSCVP 64
           ++I  FE ++K+A  +Q +TL KIL++N   EYL+  LG      ++       F S VP
Sbjct: 19  DIITWFEDVSKNAGSVQTQTLCKILKQNCGVEYLKKWLGDYNISEMDASALESLFTSVVP 78

Query: 65  LVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFR 124
           L +H+D +PYI+ I DGD +PILT +PITT+S SSGTT+GK K +PF     +TTLQ F 
Sbjct: 79  LASHKDFEPYIRNIADGDTAPILTQQPITTLSLSSGTTEGKQKLVPFTRHSAQTTLQTFT 138

Query: 125 TSYAFRNREFPIGKG-KALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQC 183
            + A+R+R +P  +G + L+FIY S   KTKGGL  GTATT+ Y S  FK + +  ++  
Sbjct: 139 LAAAYRSRVYPTREGGRILEFIYSSNHFKTKGGLTVGTATTHYYASEEFKTKQEKTKAFT 198

Query: 184 CSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIR 243
           CSP EVI G D+ QS YCHLL GL F + ++ + S F + +V AF TFE VW++LC+DIR
Sbjct: 199 CSPYEVISGGDYKQSTYCHLLLGLFFSDHVEFISSAFVYGIVQAFCTFEEVWKDLCNDIR 258

Query: 244 EGVLSSRITVPSIRAAMSKILKPNPELADLIHKKCSGLS--NWYGLIPELFPNAKYLSGI 301
           +G LSSRI +P +R A+  I+  NP LA  +   C  L   +W+GL+P+L+PNAK++  I
Sbjct: 259 DGTLSSRIKLPKMREAVLGIITSNPSLASKLEATCLELEDVDWFGLVPKLWPNAKFVCSI 318

Query: 302 MTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFI 361
           MTGSM+ YLKKLRHY   +PL+S DYGS+E WIG NV+PSL PE  TFAV+P   YFEFI
Sbjct: 319 MTGSMQPYLKKLRHYTNGVPLISGDYGSTESWIGVNVDPSLAPEKVTFAVVPTFSYFEFI 378

Query: 362 P------QRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVT 396
           P      Q   ++      +E +P+ L++VK G++YEI++T
Sbjct: 379 PLYYRQKQGCSSVADHDF-MEEEPIPLSQVKDGQQYEIVLT 418


>gi|413947783|gb|AFW80432.1| hypothetical protein ZEAMMB73_980386 [Zea mays]
          Length = 470

 Score =  378 bits (970), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 183/289 (63%), Positives = 225/289 (77%), Gaps = 9/289 (3%)

Query: 120 LQIFRTSYAFRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAM 179
           +QI+RTSYAFRNR FP+  GKALQFIYGS+Q  TKGGL A TATTNVYRS  F   M+A+
Sbjct: 1   MQIYRTSYAFRNRAFPVEDGKALQFIYGSRQFTTKGGLTATTATTNVYRSEEFMPTMRAI 60

Query: 180 QSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELC 239
           QSQ CSP+ VIFG DF QSLYCHLLCGL++ +E+++V +TFAHS+V AF+TFE VWEELC
Sbjct: 61  QSQVCSPEAVIFGADFAQSLYCHLLCGLLYADEVRIVSATFAHSIVLAFQTFERVWEELC 120

Query: 240 DDIREGVLS-SRITVPSIRAAMSKILK-PNPELADLIHKKCSGLSNWYGLIPELFPNAKY 297
            DIR G LS +R+  P++R A+  +L  P+P  AD + ++C+GLSNWYG+IP LFPNA+Y
Sbjct: 121 ADIRAGALSPARVAAPAVRGAVEALLAGPDPARADEVARRCAGLSNWYGVIPALFPNARY 180

Query: 298 LSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGY 357
           + GIMTG+MEHY+KKLRHYAG LPL++A+YG+SEGW+GANV P  PPE ATF VLPNI Y
Sbjct: 181 VHGIMTGTMEHYVKKLRHYAGGLPLVAAEYGASEGWVGANVEPETPPESATFTVLPNIAY 240

Query: 358 FEFIPQR----LGNLESQVLC---IEPKPVGLTEVKVGEEYEIIVTNVA 399
           FEFIP +     G   +   C    EP+PVGLTEV VGE YE++VT  A
Sbjct: 241 FEFIPLKAATGHGGGTAGDTCYAEAEPEPVGLTEVTVGEHYEVVVTTFA 289


>gi|222615648|gb|EEE51780.1| hypothetical protein OsJ_33229 [Oryza sativa Japonica Group]
          Length = 604

 Score =  370 bits (949), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 202/436 (46%), Positives = 257/436 (58%), Gaps = 64/436 (14%)

Query: 1   MLEK----METVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDP 56
           MLEK    + + + +E++  FE  T+DA  +QRETLR+IL ENA  EYL+ LGL G TD 
Sbjct: 1   MLEKEGKLIMSREDEEIMAWFERTTRDAADVQRETLRRILAENAGVEYLRELGLAGLTDA 60

Query: 57  ESFKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGT-------------TQ 103
            SF++ VP+VTH DL PYIQR+ DGD SP+LT KP+T IS SS T             TQ
Sbjct: 61  GSFRARVPVVTHADLDPYIQRVADGDASPVLTAKPVTAISLSSRTNGHGVLLALQLRTTQ 120

Query: 104 GKPKFLPFNDELMETTLQIFRTSYAFRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTAT 163
           GK K L FND+L+ ++++ F  SYAF NR FP+  G+ LQF+YGS+   TKGGL A T  
Sbjct: 121 GKRKRLLFNDDLLRSSIRFFHASYAFTNRAFPVEDGRVLQFMYGSRHETTKGGLTATTVM 180

Query: 164 TNVYRSSTFKAEMKAMQSQ---CCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTF 220
           TN+ RS  F A M A        CSP EV+F PDF +SLYCHLLCGL+   E++ V ++F
Sbjct: 181 TNLLRSEEFTASMAARSRPRLPSCSPSEVVFSPDFDESLYCHLLCGLLLAGEVRAVSASF 240

Query: 221 AHSLVHAFRTFELVWEELCDDIREGVLS-SRITVPSIRAAMSKILK-PNPELADLIHKKC 278
           AHS+V A +  E VW ELC DIR G  S +R+T P++R A++ IL  PNP          
Sbjct: 241 AHSIVVALQALERVWRELCADIRRGAASPARVTTPAVRRAVAPILAAPNP---------- 290

Query: 279 SGLSNWYGLIPELFPNAKYLSG---IMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIG 335
                           A+  +G    MTGSMEHY+KKLRHYAG +PL+S +Y SSEG IG
Sbjct: 291 ---------------GARRRAGAPATMTGSMEHYVKKLRHYAGGVPLVSGNYASSEGVIG 335

Query: 336 ANVNPSLPPELATFAVLPNIGYFEFIPQR--------------LGNLESQVLCIEPKPVG 381
            N      PE   F VLP+  YFEFIP +                     V   +  PVG
Sbjct: 336 INAEQHASPESVVFTVLPDAAYFEFIPLKPPCTDAAADDDNPAAAGSSCYVDADDANPVG 395

Query: 382 LTEVKVGEEYEIIVTN 397
           LT+V VGE YE+++T 
Sbjct: 396 LTDVVVGEHYEVVMTT 411


>gi|449444572|ref|XP_004140048.1| PREDICTED: probable indole-3-acetic acid-amido synthetase
           GH3.5-like [Cucumis sativus]
 gi|449475922|ref|XP_004154589.1| PREDICTED: probable indole-3-acetic acid-amido synthetase
           GH3.5-like [Cucumis sativus]
          Length = 589

 Score =  362 bits (930), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 198/404 (49%), Positives = 266/404 (65%), Gaps = 17/404 (4%)

Query: 11  DELIEEFETITKDAERIQRETLRKILEENASAEYLQNL--GLNGRTDPESFK------SC 62
           +++I  FE ++ +A   Q  TLRKIL++N   EYL+     +N    P+ F       S 
Sbjct: 5   EDIIGWFEQVSSEAALAQSRTLRKILQQNYGVEYLKKWVGDVNIHEIPDDFTLHSIFTSS 64

Query: 63  VPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQI 122
           +PL +H   +P++QRI DGD SP+LT +PITT+S SSGTT+G+ K++PF     +TTL I
Sbjct: 65  IPLSSHAHFEPFLQRIADGDSSPLLTQQPITTLSLSSGTTEGRQKYVPFTPHSAQTTLLI 124

Query: 123 FRTSYAFRNREFPI-GKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQS 181
           FR + A+R+R +PI   GK L+FIY SKQ+KTKGG+  GTATT+ Y S  FK +    +S
Sbjct: 125 FRLAAAYRSRVYPIRDGGKILEFIYSSKQTKTKGGITTGTATTHYYASEEFKIKQLKTKS 184

Query: 182 QCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDD 241
             CSP EVI G D+ QS YCHLL GL++ EE++ V STFA+++V AF   E  WEE+  D
Sbjct: 185 FTCSPQEVITGCDYKQSTYCHLLLGLLYSEEVEFVTSTFAYTIVQAFNQLEESWEEMIHD 244

Query: 242 IREGVLSSRITVPSIRAAMSKILKPNPELADLIHKKCSGL--SNWYGLIPELFPNAKYLS 299
           +    LSSRI +P IR A+ K++ P PEL   I + C  L    W GLIP+L+PN KY+ 
Sbjct: 245 LSHATLSSRIDIPEIRKAVLKVMSPKPELGWKIRRVCEELMKEGWLGLIPKLWPNCKYVY 304

Query: 300 GIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFE 359
            IMTGSM+ YLKKLRHY G LPL+S DYGS+E WIG NV+P LPPE  TFAV+P   YFE
Sbjct: 305 SIMTGSMQPYLKKLRHYGGGLPLVSGDYGSTESWIGVNVDPYLPPENVTFAVIPTFSYFE 364

Query: 360 FIP--QRLGNLESQVLCI----EPKPVGLTEVKVGEEYEIIVTN 397
           FIP  ++     S    I    E +P+ L+EVK+G++YE+++T 
Sbjct: 365 FIPLFKQHATTSSADTAIHDFLEGQPIALSEVKIGQQYELVLTT 408


>gi|168023587|ref|XP_001764319.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|16610205|dbj|BAB71764.1| GH3-like protein 1 [Physcomitrella patens]
 gi|40644908|emb|CAD22056.2| GH3-like protein [Physcomitrella patens]
 gi|48958237|emb|CAD42871.1| GH3-like protein [Physcomitrella patens]
 gi|162684471|gb|EDQ70873.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 599

 Score =  362 bits (929), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 181/397 (45%), Positives = 255/397 (64%), Gaps = 10/397 (2%)

Query: 8   VDVDE-LIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLV 66
           +D DE ++E+FE ++++A   Q E LRKILE NA+ EYLQ  GLNGRTD  SFK+CVP+ 
Sbjct: 13  LDTDEEIVEDFELMSRNARETQLELLRKILERNANVEYLQRQGLNGRTDEASFKACVPVS 72

Query: 67  THEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTS 126
           T+ +++  + RI DGD SPI    P T+ + SSGTT GK K +P  D L+   ++  +  
Sbjct: 73  TYANIEADVDRIADGDTSPICCVDPPTSFALSSGTTGGKCKLIPRTDALLAQAMKAGQIG 132

Query: 127 YAFRNREFPI---GKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQC 183
             +R R FP    G    + F Y  +Q  TK GL AGT TTN YRS+ FK   K+     
Sbjct: 133 SVYRRRAFPRKHEGPPVVMSFQYAGRQFDTKSGLKAGTGTTNFYRSAAFK-NAKSAPFSA 191

Query: 184 CSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIR 243
            SP +++ G D  Q +YCHLLCGL   +E++ + + FA+ +V  FR  E VW ++C DIR
Sbjct: 192 TSPVDIVLGYDVPQQMYCHLLCGLYRCQEVEQMSAIFAYMIVEPFRLLERVWRDICKDIR 251

Query: 244 EGVLSSRITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMT 303
           EG ++ R++ P +R+++ K+L PNPELADLI ++C+    W G+I  LFPN  Y+  I +
Sbjct: 252 EGTVNERVSDPELRSSVLKVLSPNPELADLIERECA--KGWSGIIERLFPNINYIMSIFS 309

Query: 304 GSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQ 363
           GSM  Y+  +R YAG +PLM+ADYG+SE WIG N++P  P E A+F ++PN  YFEFIP 
Sbjct: 310 GSMLPYVAPMRQYAGSVPLMNADYGASEAWIGINLDPRCPAEDASFTIIPNFAYFEFIP- 368

Query: 364 RLGNLESQVLCIE-PKPVGLTEVKVGEEYEIIVTNVA 399
            +    +    +E  + VGLT+VKVG+EYEI++T V 
Sbjct: 369 -VNRDSAGYDSVEGDEIVGLTDVKVGQEYEIVLTTVG 404


>gi|302319021|gb|ADL14700.1| JAR4, partial [Nicotiana obtusifolia]
          Length = 214

 Score =  354 bits (908), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 161/203 (79%), Positives = 181/203 (89%)

Query: 160 GTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFST 219
           GTATTNVYR+  FK  M+ MQ+ CCSPDEVIFGPDF QSLYCHLLCGLIFR+E+Q+V ST
Sbjct: 1   GTATTNVYRNIQFKKTMREMQTPCCSPDEVIFGPDFQQSLYCHLLCGLIFRDEVQVVSST 60

Query: 220 FAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPSIRAAMSKILKPNPELADLIHKKCS 279
           FAHS+VHAFR FE VW+EL  +IREG+LSSR+TVPS+RA MSK+LKP+PELAD I  KCS
Sbjct: 61  FAHSIVHAFRNFEQVWQELVTNIREGILSSRVTVPSMRAVMSKLLKPDPELADTIFNKCS 120

Query: 280 GLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVN 339
            LSNWYGLIPELFPN +Y+ GIMTGSME YLKKLRHYAG+LPL+SADYGSSEGWIGAN+N
Sbjct: 121 RLSNWYGLIPELFPNTRYIYGIMTGSMEPYLKKLRHYAGELPLLSADYGSSEGWIGANIN 180

Query: 340 PSLPPELATFAVLPNIGYFEFIP 362
           P LPPEL T+AVLPNIGYFEFIP
Sbjct: 181 PELPPELVTYAVLPNIGYFEFIP 203


>gi|293332231|ref|NP_001170149.1| uncharacterized protein LOC100384080 [Zea mays]
 gi|224033843|gb|ACN35997.1| unknown [Zea mays]
          Length = 481

 Score =  344 bits (882), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 164/297 (55%), Positives = 215/297 (72%), Gaps = 17/297 (5%)

Query: 120 LQIFRTSYAFRNREFPI-GKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKA 178
           + ++RTS+AFRNR FP+ G GKALQF+YGS+Q  TKGGL   +ATT++YR+  +KA ++ 
Sbjct: 1   MHVYRTSFAFRNRAFPVEGGGKALQFVYGSRQLTTKGGLTVASATTHLYRNEGYKAAVRG 60

Query: 179 MQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEEL 238
           +Q  CCSPDEV+F  DF QSLYCHLLCGL++ +E++ VF+ F H+LV A +T E  WEEL
Sbjct: 61  IQLPCCSPDEVVFAADFAQSLYCHLLCGLLYADEVRTVFAVFGHNLVLALQTLERAWEEL 120

Query: 239 CDDIREGVLS-SRITVPSIRAAMSKIL-KPNPELADLIHKKC--SGLSNWYGLIPELFPN 294
           C DIR G LS +R+T P +R A+S +L KPNP LAD + ++C  + L  W GL+  L+PN
Sbjct: 121 CHDIRRGALSPARVTEPELRQAVSALLAKPNPALADEVARRCAEARLGGWRGLVHALWPN 180

Query: 295 AKYLSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPN 354
           A+Y+  I+TGSMEHY++KLRHYAG LPL++ DYGSSEG +GANV P +PP+ ATFAVLPN
Sbjct: 181 ARYVHTIVTGSMEHYVRKLRHYAGGLPLVAMDYGSSEGMVGANVEPEVPPDSATFAVLPN 240

Query: 355 IGYFEFIPQRL---GNLESQVLCIE---------PKPVGLTEVKVGEEYEIIVTNVA 399
           I YFEFIP +    G   S+  C +           PVGLTEV VGE YE+++T  A
Sbjct: 241 IAYFEFIPLKTTTNGGGGSRADCTDTGGTSYSSGADPVGLTEVTVGEHYEVVMTTFA 297


>gi|357482733|ref|XP_003611653.1| Indole-3-acetic acid-amido synthetase GH3.3 [Medicago truncatula]
 gi|355512988|gb|AES94611.1| Indole-3-acetic acid-amido synthetase GH3.3 [Medicago truncatula]
          Length = 600

 Score =  313 bits (801), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 168/403 (41%), Positives = 241/403 (59%), Gaps = 5/403 (1%)

Query: 1   MLEKMETVD---VDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPE 57
           +LE   +VD   +++ +E  E +TK+ + +Q   L +ILE+NA  EYL+  GLNG TD E
Sbjct: 8   LLEPPSSVDEKSLNKALEFIEEMTKNTDSVQERVLSEILEQNAETEYLKRFGLNGATDRE 67

Query: 58  SFKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
           +FKS V ++T+EDL P IQRI +GD SPIL+  PI+    SSGT+ G+ K +P   + M+
Sbjct: 68  TFKSKVAVITYEDLLPDIQRIANGDRSPILSAHPISEFLTSSGTSAGERKLMPTIHQEMD 127

Query: 118 TTLQIFRTSYAFRNREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEM 176
               ++       N+  P + KGKAL F++   ++KT  GL A    T  Y+S  FK   
Sbjct: 128 RRQLLYSLLMPVMNQYVPDLDKGKALHFLFIKAETKTPSGLVARPVLTAYYKSEQFKKRP 187

Query: 177 KAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWE 236
               +   SPDE I  PD  QS+Y  +LCGLI R E+  V + FA  L+ A R  +L W 
Sbjct: 188 FDPYNVLTSPDEAILCPDSFQSMYTQMLCGLIMRHEVLRVGAVFASGLLRAIRFLQLNWA 247

Query: 237 ELCDDIREGVLSSRITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAK 296
           EL  DI  G L+ +IT PSI+  MSKILKPNPELA  + K+CSG  NW  +IP ++PN K
Sbjct: 248 ELVHDIETGTLNPKITDPSIKQCMSKILKPNPELAKFVTKECSG-DNWERIIPRIWPNTK 306

Query: 297 YLSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIG 356
           YL  I+TG+M  Y+  L +Y+G+LP     Y SSE + G N+ P   P   ++ ++PN+G
Sbjct: 307 YLEVIVTGAMAQYIPTLDYYSGNLPKPCTMYASSECYFGLNLKPMTEPNEVSYTIMPNMG 366

Query: 357 YFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
           YFEF+P    +  +      PK V L +V++G+ YE+++T  +
Sbjct: 367 YFEFLPHDDSSPITLSRDSPPKLVDLADVQIGKFYELVITTYS 409


>gi|168060396|ref|XP_001782182.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|40644906|emb|CAD21959.1| GH3-like protein [Physcomitrella patens]
 gi|48958235|emb|CAD42870.1| GH3-like protein [Physcomitrella patens]
 gi|162666348|gb|EDQ53005.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 636

 Score =  303 bits (777), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 163/387 (42%), Positives = 232/387 (59%), Gaps = 10/387 (2%)

Query: 17  FETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQ 76
            + + +D   IQ E LR+ILE  A  EYL+ +GLNGRTD ESF+ CVP+V++ DL+  I 
Sbjct: 65  LDLLAEDVMFIQHEKLREILEVQADVEYLRRVGLNGRTDVESFRKCVPIVSYGDLEADIM 124

Query: 77  RIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME--TTLQIFRTSYAFRNREF 134
           R+++G+ +PI T  PI T++ SSGTT GKPKF+P      E    LQ F TS     REF
Sbjct: 125 RVVNGEKTPIFTVDPIVTLNLSSGTTAGKPKFIPSTTRAYEYFMFLQTFVTS--IYRREF 182

Query: 135 PIGK-GKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGP 193
           P  K G +    +  KQ  T  G+ AG  +TN +R   F+  ++    + C PDEVI   
Sbjct: 183 PGYKDGTSFTLAFAGKQIDTPSGIKAGAQSTNHFRGPMFRNRVRNANREYCVPDEVILSD 242

Query: 194 DFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITV 253
           D  QS+YCHLLC L    EI  V+ TFA S+V A R  +  W E+ +DIR G L+++IT 
Sbjct: 243 DTTQSMYCHLLCALAQAPEIVKVYGTFAASIVSAVRALQKHWSEIVEDIRTGTLNAKITE 302

Query: 254 PSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKL 313
           P +R A+ ++L PNP+LA  I ++CS   NW G++P LFPNA ++S +++GSM  Y   L
Sbjct: 303 PEMRTAVQQMLHPNPDLASRIEEECSK-DNWEGILPRLFPNAHFVSCVISGSMLQYAPAL 361

Query: 314 RHYAGDLPLMSADYGSSE-GWIGANVNPSLPPELATFAVLPNIGYFEFIP-QRLGNLESQ 371
           +H++G LP +S  Y + E  +IG N +    PE  T+ + P   Y+EFIP     N E  
Sbjct: 362 KHFSGHLPTISLAYAACECSFIGFNPSMKCAPEDITYMLWPETAYYEFIPLDEDSNPEQD 421

Query: 372 VLCIEPKPVGLTEVKVGEEYEIIVTNV 398
              +  + V   +++VG +YE++VTNV
Sbjct: 422 GDVV--RTVEACDLEVGRQYELVVTNV 446


>gi|378747661|gb|AFC36444.1| GH3-1 [Quercus robur]
          Length = 603

 Score =  300 bits (767), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 159/384 (41%), Positives = 230/384 (59%), Gaps = 3/384 (0%)

Query: 17  FETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQ 76
            + +T + + +Q   L +IL +NA  EYL+   L+G TD ++FKS +P+V++EDLQPYIQ
Sbjct: 31  IDEMTTNTDSVQERVLGEILSQNAETEYLRRYQLDGATDRDTFKSKIPVVSYEDLQPYIQ 90

Query: 77  RIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP- 135
           RI +GD SPIL+ +PI+    SSGT+ G+ K +P   E  +   +++      +N   P 
Sbjct: 91  RIANGDRSPILSSRPISEFLTSSGTSAGERKLMPTIYEEWDRRSKLYSLLMPVKNLYVPG 150

Query: 136 IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDF 195
           + KGK L F++   ++KT  GL A    T  Y+S  FK       +   SPDE I   D 
Sbjct: 151 LDKGKGLYFLFVKAETKTPSGLLARPVLTGYYKSDHFKTRPYDPYTVYTSPDEAILCADS 210

Query: 196 HQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPS 255
            QSLY  +LCGL+ REE+  + + FA  L+ A R  +L W+EL  DI  G L+ +IT PS
Sbjct: 211 FQSLYTQMLCGLLMREEVLRLGAVFASGLLRAIRFLQLNWKELAHDISTGTLNPKITDPS 270

Query: 256 IRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRH 315
           ++  MSKI+KPNPELA+ I K+CSG  NW G+I  ++PN KYL  I+TG+M  Y   L +
Sbjct: 271 LKECMSKIVKPNPELAEFITKECSG-ENWEGIITRIWPNTKYLDVIVTGAMAQYRPTLDY 329

Query: 316 YAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCI 375
           Y+  LP     Y SSE + G N+ P   P   ++ ++PN+GYFEF+P    N  +     
Sbjct: 330 YSAGLPQSCTMYASSECYFGLNLKPMCKPSEVSYTIMPNMGYFEFLPHD-PNAPAFSRDS 388

Query: 376 EPKPVGLTEVKVGEEYEIIVTNVA 399
            P+ V L +V+VG+EYE+I+T  A
Sbjct: 389 PPRLVDLADVEVGKEYELIITTYA 412


>gi|356495494|ref|XP_003516612.1| PREDICTED: probable indole-3-acetic acid-amido synthetase
           GH3.1-like [Glycine max]
          Length = 631

 Score =  298 bits (764), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 161/383 (42%), Positives = 228/383 (59%), Gaps = 2/383 (0%)

Query: 18  ETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQR 77
           E +TK+ + +Q   L +IL +NA  EYL+   LNG TD ++FKS VP+VT+EDLQP I+R
Sbjct: 59  EQVTKNTDSVQERVLSEILTQNAETEYLKRFALNGATDRDTFKSKVPVVTYEDLQPDIER 118

Query: 78  IIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP-I 136
           I +GD SPIL   PI+    SSGT+ G+ K +P   E M+    ++       N+    +
Sbjct: 119 IANGDRSPILCAHPISEFLTSSGTSAGERKLMPTIHEEMDRRQLLYSLLMPVMNQYVSDL 178

Query: 137 GKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFH 196
            KGKAL F++   ++KT GGL A    T+ Y+S  F+       +   SP+E I  PD  
Sbjct: 179 DKGKALHFLFIKAEAKTPGGLMARPVLTSYYKSEQFRKRPFDPYNVLTSPNEAILCPDSF 238

Query: 197 QSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPSI 256
           QS+Y  +LCGLI R E+  V + FA  L+ A R  +L WE+L  DI  G L+ +IT PSI
Sbjct: 239 QSMYTQMLCGLIMRHEVLRVGAVFASGLLRAIRFLQLNWEQLSHDILTGTLNPKITEPSI 298

Query: 257 RAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRHY 316
           +  MSKILKP+PELA  I  +CSG  NW  +I  ++PN KYL  I+TG+M  Y+  L +Y
Sbjct: 299 KERMSKILKPDPELAAFIKSECSG-ENWERIIVRIWPNTKYLDVIVTGAMAQYIPTLDYY 357

Query: 317 AGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIE 376
           +G LP     Y SSE + G N+ P   P   ++ +LPN+GYFEF+P    +  +      
Sbjct: 358 SGGLPKPCTMYASSECFFGLNLKPMSEPSDVSYTILPNMGYFEFLPHDDSSPITLSKDSP 417

Query: 377 PKPVGLTEVKVGEEYEIIVTNVA 399
           P+ V L +V++G+ YE+I+T  A
Sbjct: 418 PRLVELADVELGKYYELIITTYA 440


>gi|356542107|ref|XP_003539512.1| PREDICTED: indole-3-acetic acid-amido synthetase GH3.5-like
           [Glycine max]
          Length = 614

 Score =  297 bits (761), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 156/398 (39%), Positives = 237/398 (59%), Gaps = 4/398 (1%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           +E  E +T +A+ IQ + L +IL  +A AEYLQ  GL+GRTD  +FK  +P+VT+EDL+P
Sbjct: 33  LEYIEEVTSNADVIQEKVLAQILSRSAHAEYLQRHGLDGRTDRNTFKKIMPVVTYEDLKP 92

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNRE 133
           YI RI +GD SPIL  KPI+    SSGT+ G+ K +P  +E +E    ++       ++ 
Sbjct: 93  YIDRIANGDTSPILCSKPISEFLTSSGTSGGERKLMPTIEEELERRSMLYSLLMPVMDQF 152

Query: 134 FP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFG 192
            P + KGK + F++   ++KT GGL A    T+ Y+SS FK       +   SP+E I  
Sbjct: 153 VPALDKGKGMYFLFTKSEAKTPGGLLARPVLTSYYKSSHFKHRKHDPYTNYTSPNETILC 212

Query: 193 PDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRIT 252
           PD +QS+Y  LLCGL   EE+  V + FA   + A +  E  +  LC+DIR+G L ++I 
Sbjct: 213 PDSYQSMYSQLLCGLCQNEEVLRVGAVFASGFIRALKFLEKHFVSLCNDIRKGTLDAKIN 272

Query: 253 VPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKK 312
            P +R A+ K+LKPNP LAD +  +C   S W G++  ++PN KY+  I+TG+M  Y+  
Sbjct: 273 DPLVREAVMKVLKPNPTLADFVEAECMKGS-WKGIVTRIWPNTKYVDVIVTGTMSQYIPI 331

Query: 313 LRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIP--QRLGNLES 370
           L +Y+  LPL+   Y SSE + G N+NP   P    + ++P + YFEF+P  +  G+  S
Sbjct: 332 LDYYSNGLPLVCTMYASSECYFGLNLNPLCDPSEVAYTLIPTMAYFEFLPLDEINGHTNS 391

Query: 371 QVLCIEPKPVGLTEVKVGEEYEIIVTNVAVAGSLFSRI 408
               ++ + + L +VK+G+EYE++VT  A   ++   I
Sbjct: 392 VSHLVQEQLLDLADVKLGQEYELVVTTYAGTATVIGDI 429


>gi|356541719|ref|XP_003539321.1| PREDICTED: probable indole-3-acetic acid-amido synthetase
           GH3.1-like isoform 2 [Glycine max]
          Length = 583

 Score =  297 bits (761), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 160/383 (41%), Positives = 229/383 (59%), Gaps = 2/383 (0%)

Query: 18  ETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQR 77
           E +TK+ + +Q   L +IL +NA  EYL+  GLNG TD ++FKS VP+VT+EDLQP IQR
Sbjct: 11  EEVTKNTDSVQERVLTEILTQNAETEYLKRFGLNGATDRDTFKSKVPVVTYEDLQPDIQR 70

Query: 78  IIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP-I 136
           I +GD SPIL   PI+    SSGT+ G+ K +P   E M+    ++       N+    +
Sbjct: 71  IANGDSSPILCSHPISEFLTSSGTSAGERKLMPTIHEEMDRRQLLYSLLMPVMNQYVSDL 130

Query: 137 GKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFH 196
            KGKAL F++   ++KT GGL A    T+ Y+S  F+       +   SP+E I  PD  
Sbjct: 131 DKGKALHFLFIKAEAKTPGGLVARPVLTSYYKSEQFRKRPFDPYNVLTSPNEAILCPDSF 190

Query: 197 QSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPSI 256
           QS+Y  +LCGLI R E+  V + FA  L+ A R  +L WE+L  DI  G L+ +IT PSI
Sbjct: 191 QSMYTQMLCGLIMRHEVLRVGAVFASGLLRAIRFLQLNWEQLSHDILTGTLNPKITEPSI 250

Query: 257 RAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRHY 316
           +  MSKILKP+P+LA  I  +CS + NW  +I  ++PN KYL  I+TG+M  Y+  L +Y
Sbjct: 251 KERMSKILKPDPQLAAFIKNECS-VENWERIIVRIWPNTKYLDVIVTGAMAQYIPTLDYY 309

Query: 317 AGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIE 376
           +G LP     Y SSE + G N+ P   P   ++ +LPN+GYFEF+P    +  +      
Sbjct: 310 SGGLPKPCTMYASSECFFGLNLKPMSEPSDVSYTILPNMGYFEFLPHDDSSPVTLSKDSP 369

Query: 377 PKPVGLTEVKVGEEYEIIVTNVA 399
           P+ V L +V++G+ YE+I+T  +
Sbjct: 370 PRLVELADVELGKYYELIITTYS 392


>gi|356541717|ref|XP_003539320.1| PREDICTED: probable indole-3-acetic acid-amido synthetase
           GH3.1-like isoform 1 [Glycine max]
          Length = 593

 Score =  297 bits (760), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 160/383 (41%), Positives = 229/383 (59%), Gaps = 2/383 (0%)

Query: 18  ETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQR 77
           E +TK+ + +Q   L +IL +NA  EYL+  GLNG TD ++FKS VP+VT+EDLQP IQR
Sbjct: 21  EEVTKNTDSVQERVLTEILTQNAETEYLKRFGLNGATDRDTFKSKVPVVTYEDLQPDIQR 80

Query: 78  IIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP-I 136
           I +GD SPIL   PI+    SSGT+ G+ K +P   E M+    ++       N+    +
Sbjct: 81  IANGDSSPILCSHPISEFLTSSGTSAGERKLMPTIHEEMDRRQLLYSLLMPVMNQYVSDL 140

Query: 137 GKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFH 196
            KGKAL F++   ++KT GGL A    T+ Y+S  F+       +   SP+E I  PD  
Sbjct: 141 DKGKALHFLFIKAEAKTPGGLVARPVLTSYYKSEQFRKRPFDPYNVLTSPNEAILCPDSF 200

Query: 197 QSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPSI 256
           QS+Y  +LCGLI R E+  V + FA  L+ A R  +L WE+L  DI  G L+ +IT PSI
Sbjct: 201 QSMYTQMLCGLIMRHEVLRVGAVFASGLLRAIRFLQLNWEQLSHDILTGTLNPKITEPSI 260

Query: 257 RAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRHY 316
           +  MSKILKP+P+LA  I  +CS + NW  +I  ++PN KYL  I+TG+M  Y+  L +Y
Sbjct: 261 KERMSKILKPDPQLAAFIKNECS-VENWERIIVRIWPNTKYLDVIVTGAMAQYIPTLDYY 319

Query: 317 AGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIE 376
           +G LP     Y SSE + G N+ P   P   ++ +LPN+GYFEF+P    +  +      
Sbjct: 320 SGGLPKPCTMYASSECFFGLNLKPMSEPSDVSYTILPNMGYFEFLPHDDSSPVTLSKDSP 379

Query: 377 PKPVGLTEVKVGEEYEIIVTNVA 399
           P+ V L +V++G+ YE+I+T  +
Sbjct: 380 PRLVELADVELGKYYELIITTYS 402


>gi|255567939|ref|XP_002524947.1| Indole-3-acetic acid-amido synthetase GH3.3, putative [Ricinus
           communis]
 gi|223535782|gb|EEF37444.1| Indole-3-acetic acid-amido synthetase GH3.3, putative [Ricinus
           communis]
          Length = 598

 Score =  296 bits (758), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 157/383 (40%), Positives = 229/383 (59%), Gaps = 3/383 (0%)

Query: 18  ETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQR 77
           E +T++ + +Q + L +IL  NA  EYL+   LNG TD ++FKS VP+VT+EDLQP IQR
Sbjct: 27  EEMTRNIDSVQEKVLAEILSRNAETEYLERFQLNGATDRDAFKSKVPVVTYEDLQPEIQR 86

Query: 78  IIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP-I 136
           I +GD S I +  PI+    SSGT+ G+ K +P   E ++    ++       N   P +
Sbjct: 87  IANGDRSNIFSSHPISEFLTSSGTSAGERKLMPTIHEELDRRTLLYSLLMPVMNLYVPGL 146

Query: 137 GKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFH 196
            KGK L F++   ++KT GGL A    T+ Y+S  FK       +   SP+E I  PD  
Sbjct: 147 DKGKGLYFLFVKAETKTPGGLVARPVLTSYYKSEHFKNRPFDPYNVYTSPNETILCPDSF 206

Query: 197 QSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPSI 256
           QS+Y  +LCGLI REE+  V + FA  L+ A R  ++  + L +DI  G L+ +I+ PSI
Sbjct: 207 QSMYSQMLCGLIMREEVLRVGAVFASGLLRAIRFLQINCKHLAEDISTGTLNPKISDPSI 266

Query: 257 RAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRHY 316
           R  M+KILKPNPELA+ I K+CS   NW G+I  ++PN KYL  I+TG+M  Y+  L +Y
Sbjct: 267 RECMAKILKPNPELAEFITKECSE-ENWEGIITRIWPNTKYLDVIVTGAMAQYIPTLEYY 325

Query: 317 AGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIE 376
           +  LP+    Y SSE + G N+NP + P   ++ ++PN+ YFEF+P    +         
Sbjct: 326 SNGLPMACTMYASSECYFGVNLNPMVKPSDVSYTIMPNMAYFEFLPHESSSSALSRD-SP 384

Query: 377 PKPVGLTEVKVGEEYEIIVTNVA 399
           P+ V L +V+VG+EYE+++T  A
Sbjct: 385 PRLVDLADVEVGKEYELVITTYA 407


>gi|224115056|ref|XP_002332226.1| GH3 family protein [Populus trichocarpa]
 gi|222831839|gb|EEE70316.1| GH3 family protein [Populus trichocarpa]
          Length = 597

 Score =  296 bits (757), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 160/383 (41%), Positives = 229/383 (59%), Gaps = 7/383 (1%)

Query: 17  FETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQ 76
            E +T + + +Q   L++IL  NA  EYLQ   LNG TD +SFKS +P+VT+EDLQP IQ
Sbjct: 25  IEDMTANVDLVQERVLKEILTSNAETEYLQKYHLNGATDRDSFKSKIPMVTYEDLQPQIQ 84

Query: 77  RIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP- 135
           RI +GD SPIL+  PI+    SSGT+ G+ K +P  +E M+    ++       N   P 
Sbjct: 85  RIANGDKSPILSSHPISEFLTSSGTSAGERKLMPTIEEEMDRRQLLYSLLMPVMNLYVPG 144

Query: 136 IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDF 195
           + KGK L F +   ++KT GGL A    T+ Y+S  FK       +   SP+E I   D 
Sbjct: 145 LDKGKGLYFYFIKAEAKTPGGLVARPVLTSYYKSKQFKTRPYDPYNVITSPNETILCVDS 204

Query: 196 HQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPS 255
            QS+Y  +LCGLI REE+  V + FA  L+ A R  +L W+EL +DI  G L+ ++T PS
Sbjct: 205 FQSMYSQMLCGLIMREEVLRVGAVFASGLLRAIRFLQLNWKELANDISTGSLNPKVTNPS 264

Query: 256 IRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRH 315
           IR  M+KILKPN ELA+ I K+CS   NW  +I  ++PN KYL  I+TG+M  Y+  L +
Sbjct: 265 IRECMAKILKPNQELAEFITKECSD-ENWERIITRIWPNTKYLDVIVTGAMAQYIPTLDY 323

Query: 316 YAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCI 375
           Y+G LP     Y SSE + G N+ P   P   ++ ++PN+GYFEF+P    +  +     
Sbjct: 324 YSGGLPKPCTMYASSECFFGLNLRPMSEPSEVSYTIMPNMGYFEFLPH---DPSAPAFSR 380

Query: 376 E--PKPVGLTEVKVGEEYEIIVT 396
           E  P+ + L +++VG+EYE+++T
Sbjct: 381 ESPPRLLDLADLEVGKEYELVIT 403


>gi|300680024|gb|ADK27716.1| GH3 [Dimocarpus longan]
          Length = 596

 Score =  295 bits (756), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 157/387 (40%), Positives = 228/387 (58%), Gaps = 5/387 (1%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           ++  E IT++AE +Q   L +IL  NA  EYL+   L+G TD ++FKS +P++T+EDLQP
Sbjct: 23  LQFIEEITRNAELVQERVLAEILARNADVEYLKRYKLDGATDRDTFKSKLPVITYEDLQP 82

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNRE 133
            IQRI +GD S IL+  PI+    SSGT+ G+ K +P   E ++    ++       N  
Sbjct: 83  EIQRIANGDRSNILSAHPISEFLTSSGTSAGERKLMPTIKEELDRRQMLYSLLMPVMNLY 142

Query: 134 FP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFG 192
            P + KGK L F++   ++KT GGL A    T+ Y+S  FK       +   SP+E I  
Sbjct: 143 VPGLDKGKGLYFLFVKSETKTPGGLLARPVLTSYYKSDHFKTRPYDPYNVYTSPNEAILC 202

Query: 193 PDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRIT 252
            D  QS+Y  +LCGL+ R ++  + + FA  L+ A R  +L W+ L +D+  G LS +IT
Sbjct: 203 ADSFQSMYSQMLCGLLDRLQVLRLRAVFASGLLRAIRFLQLHWQSLSNDLETGTLSPKIT 262

Query: 253 VPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKK 312
            PSIR  M+  LKP+ ELAD I  +CS   NW G+I  ++PN KYL  I+TG+M  Y+  
Sbjct: 263 DPSIRNCMAGTLKPDSELADFIRNECSK-QNWEGIITRVWPNTKYLDVIVTGAMAQYIPT 321

Query: 313 LRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQV 372
           L HY+G LPL    Y SSE + G N+NP   P   ++ ++PN+ YFEF+P   G   S  
Sbjct: 322 LDHYSGGLPLACTMYASSECYFGLNLNPMCKPSEVSYTIMPNMAYFEFLPHEPG---STA 378

Query: 373 LCIEPKPVGLTEVKVGEEYEIIVTNVA 399
               P+ V L +V+VG+EYE+++T  A
Sbjct: 379 TGSAPRLVDLVDVEVGKEYELVITTYA 405


>gi|15227787|ref|NP_179898.1| indole-3-acetic acid-amido synthetase GH3.3 [Arabidopsis thaliana]
 gi|62900125|sp|O22190.1|GH33_ARATH RecName: Full=Indole-3-acetic acid-amido synthetase GH3.3; AltName:
           Full=Auxin-responsive GH3-like protein 3; Short=AtGH3-3
 gi|2642446|gb|AAB87114.1| unknown protein [Arabidopsis thaliana]
 gi|19699328|gb|AAL91274.1| At2g23170/T20D16.20 [Arabidopsis thaliana]
 gi|23463057|gb|AAN33198.1| At2g23170/T20D16.20 [Arabidopsis thaliana]
 gi|330252330|gb|AEC07424.1| indole-3-acetic acid-amido synthetase GH3.3 [Arabidopsis thaliana]
          Length = 595

 Score =  295 bits (756), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 161/401 (40%), Positives = 236/401 (58%), Gaps = 9/401 (2%)

Query: 1   MLEKMETVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFK 60
           M+    T DV  L    E +T++ + +Q++ +R+IL  N+  EYL+  GL G TD ++FK
Sbjct: 11  MMHSPSTKDVKAL-RFIEEMTRNVDFVQKKVIREILSRNSDTEYLKRFGLKGFTDRKTFK 69

Query: 61  SCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTL 120
           + VP+V ++DL+P IQRI +GD S IL+  PIT    SSGT+ G+ K +P  DE M+   
Sbjct: 70  TKVPVVIYDDLKPEIQRIANGDRSMILSSYPITEFLTSSGTSAGERKLMPTIDEDMDRRQ 129

Query: 121 QIFRTSYAFRNREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAM 179
            ++       N   P + KGKAL F++   +SKT GGL A    T+ Y+S  FK      
Sbjct: 130 LLYSLLMPVMNLYVPGLDKGKALYFLFVKTESKTPGGLPARPVLTSYYKSEQFKRRPNDP 189

Query: 180 QSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELC 239
            +   SP+E I  PD  QS+Y  +LCGL+ R E+  + + FA  L+ A    +  W+EL 
Sbjct: 190 YNVYTSPNEAILCPDSSQSMYTQMLCGLLMRHEVLRLGAVFASGLLRAIGFLQTNWKELA 249

Query: 240 DDIREGVLSSRITVPSIRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFPNAKYL 298
           DDI  G LSSRI+ P+I+ +MSKIL KP+ ELAD I   C   ++W G+I +++PN KYL
Sbjct: 250 DDISTGTLSSRISDPAIKESMSKILTKPDQELADFITSVCGQDNSWEGIITKIWPNTKYL 309

Query: 299 SGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYF 358
             I+TG+M  Y+  L +Y+G LP+    Y SSE + G N+ P   P   ++ ++PN+ YF
Sbjct: 310 DVIVTGAMAQYIPMLEYYSGGLPMACTMYASSESYFGINLKPMCKPSEVSYTIMPNMAYF 369

Query: 359 EFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
           EF+P      E   L      V L +V+VG+EYE+++T  A
Sbjct: 370 EFLPHHEVPTEKSEL------VELADVEVGKEYELVITTYA 404


>gi|359485734|ref|XP_002276241.2| PREDICTED: indole-3-acetic acid-amido synthetase GH3.6-like [Vitis
           vinifera]
          Length = 614

 Score =  295 bits (756), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 158/394 (40%), Positives = 232/394 (58%), Gaps = 9/394 (2%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           +E  E +T +A+ +Q + L +I+  N++ EYLQ  GLNGR D ++FK  VP+VT+ED+ P
Sbjct: 29  LEFIEDVTMNAKEVQMQVLSEIITRNSNVEYLQRHGLNGRVDADTFKKIVPVVTYEDMLP 88

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNRE 133
            I+RI +GD+SPIL  KPI+    SSGT+ G+ K +P  +E +     ++       N+ 
Sbjct: 89  DIERIANGDMSPILCSKPISEFLTSSGTSGGERKLMPTIEEELGRRSLLYSLLMPVMNQS 148

Query: 134 FP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFG 192
            P + +GK + F++   ++KT GGL A    T+ Y+SS F+       +   SP+E I  
Sbjct: 149 VPGLDEGKGMYFLFVKSEAKTPGGLMARPVLTSYYKSSYFRDRPYDPYTNYTSPNETILC 208

Query: 193 PDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRIT 252
           PD +QS+Y  LLCGL   +E+  V + FA   + A R  E  W  LC DIR G L S+I 
Sbjct: 209 PDSYQSMYSQLLCGLCQNKEVLRVGAVFASGFIRAIRFLEKHWVLLCKDIRAGTLDSQIN 268

Query: 253 VPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKK 312
            PS+R A+ +ILKPNPELAD I  +C   S W G+I  L+PN KY+  I+TG+M  Y+  
Sbjct: 269 DPSVREAVKRILKPNPELADFIEAECRRES-WEGIITRLWPNTKYIDVIVTGTMSQYIPT 327

Query: 313 LRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQV 372
           L +Y+  LPL+   Y SSE + G N+NP   P   ++ ++P + YFEF+P    N  + V
Sbjct: 328 LDYYSNGLPLVCTMYASSECYFGLNLNPLCKPSEVSYTLIPTMAYFEFLPVNRKNGFTNV 387

Query: 373 LCIEP-------KPVGLTEVKVGEEYEIIVTNVA 399
               P       + V L +VK+G+EYE++VT  A
Sbjct: 388 SESAPLNEKEHQELVDLVDVKLGQEYELVVTTYA 421


>gi|356547047|ref|XP_003541929.1| PREDICTED: indole-3-acetic acid-amido synthetase GH3.6-like
           [Glycine max]
          Length = 614

 Score =  293 bits (750), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 159/395 (40%), Positives = 233/395 (58%), Gaps = 16/395 (4%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           +E  E +T +A+ IQ + L +IL  +A+AEYLQ  GL GRTD  +FK+ +P+VT+EDL+P
Sbjct: 32  LEYIEEVTTNADEIQEKVLAQILSRSANAEYLQRHGLEGRTDRNTFKNIMPVVTYEDLKP 91

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNRE 133
            I RI +GD SPIL  KPI+    SSGT+ G+ K +P  +E +E    ++       ++ 
Sbjct: 92  DIDRIANGDTSPILCSKPISEFLTSSGTSGGERKLMPTIEEELERRSMLYSLLMPVMDQF 151

Query: 134 FP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFG 192
            P + KGK + F++   ++KT GGL A    T+ Y+SS FK       +   SP+E I  
Sbjct: 152 VPDLDKGKGMYFLFTKSEAKTPGGLLARPVLTSYYKSSHFKHRKHDPYTNYTSPNETILC 211

Query: 193 PDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRIT 252
            D +QS+Y  LLCGL   EE+  V + FA   + A +  E  +  LC+DIR G L ++IT
Sbjct: 212 HDSYQSMYSQLLCGLYQNEEVLRVGAVFASGFIRALKFLEKHFVCLCNDIRTGTLDAKIT 271

Query: 253 VPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKK 312
            PS+R A+ K+LKPNP LAD +  +C   S W G+I  ++PN KY+  I+TG+M  Y+  
Sbjct: 272 DPSVREAVMKVLKPNPTLADFVETECMKGS-WKGIITRIWPNTKYVDVIVTGTMSQYIPI 330

Query: 313 LRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIP--------QR 364
           L +Y+  LPL+   Y SSE + G N+NPS  P    + ++P + YFEF+P          
Sbjct: 331 LDYYSNGLPLVCTMYASSECYFGLNLNPSCDPSEVAYTLIPTMAYFEFLPLDEINGHTNS 390

Query: 365 LGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
           +  LE + L      V L +VK+G+EYE++VT  A
Sbjct: 391 ISQLEQEHL------VDLADVKLGQEYELVVTTYA 419


>gi|242050748|ref|XP_002463118.1| hypothetical protein SORBIDRAFT_02g038170 [Sorghum bicolor]
 gi|241926495|gb|EER99639.1| hypothetical protein SORBIDRAFT_02g038170 [Sorghum bicolor]
          Length = 619

 Score =  293 bits (749), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 158/398 (39%), Positives = 232/398 (58%), Gaps = 16/398 (4%)

Query: 9   DVD-ELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVT 67
           D D E ++  E +T + + +Q   L +IL  NA  EYL   G+ G +D  +F++ VP+ T
Sbjct: 33  DADAEKLQFIEEMTSNVDAVQERVLGEILARNADTEYLAKYGITGASDRATFRAKVPMAT 92

Query: 68  HEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLP-FNDELMETTLQIFRTS 126
           +EDLQPYI+RI DGD SPIL+G P++    SSGT+ G+ K +P   DEL    L ++   
Sbjct: 93  YEDLQPYIRRIADGDRSPILSGHPVSEFLTSSGTSAGERKLMPTIEDELNRRQL-LYSLQ 151

Query: 127 YAFRNREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCS 185
               N   P + KGKAL F++   ++KT GGL A    T+ Y+S+ FK       +   S
Sbjct: 152 MPVMNLYVPGMDKGKALHFLFVKSETKTPGGLAARPVLTSYYKSNHFKNRPFDAYNNYTS 211

Query: 186 PDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREG 245
           P   I   D  QS+Y  ++CGL  R+++  V + FA  L+ A R  +L WE+L DDI  G
Sbjct: 212 PTAAILCADAFQSMYAQMVCGLCQRQDVLRVGAVFASGLLRAIRFLQLNWEQLADDIESG 271

Query: 246 VLSSRITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGS 305
            L+ RIT PS+R A++ IL+P+PELA L+  +CS   +W G+I  ++PN KYL  I+TG+
Sbjct: 272 SLTPRITDPSVREAVAGILRPDPELASLVRSECSK-GDWAGIITRIWPNTKYLDVIVTGA 330

Query: 306 MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRL 365
           M  Y+  L++Y+G LP+    Y SSE + G N+ P   P   ++ ++PN+ YFEF+P   
Sbjct: 331 MAQYIPTLKYYSGGLPMACTMYASSECYFGLNLRPMCDPSEVSYTLMPNMCYFEFLPMDA 390

Query: 366 ----GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
               G   SQ+       V L  V+VG EYE+++T  A
Sbjct: 391 AASGGGDASQL-------VDLARVEVGREYELVITTYA 421


>gi|255586158|ref|XP_002533739.1| Indole-3-acetic acid-amido synthetase GH3.6, putative [Ricinus
           communis]
 gi|223526345|gb|EEF28642.1| Indole-3-acetic acid-amido synthetase GH3.6, putative [Ricinus
           communis]
          Length = 612

 Score =  293 bits (749), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 157/396 (39%), Positives = 234/396 (59%), Gaps = 12/396 (3%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           ++  E +T + + +Q++ L +IL  NA  EYLQ  GLNG TD ESFK  +P++ +ED+QP
Sbjct: 24  LQFIEDVTSNPDEVQKKVLEEILTRNARVEYLQKHGLNGYTDRESFKKIMPVIAYEDIQP 83

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNRE 133
           +I RI +GD SPIL  KPI+    SSGT+ G+ K +P  +E +     ++       N+ 
Sbjct: 84  HINRIANGDTSPILCSKPISEFLTSSGTSGGERKLMPTIEEELGRRSLLYSLLMPVMNQF 143

Query: 134 FP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFG 192
            P + KGK + F++   ++KT GGL A    T+ Y+SS FK       +   SP+E I  
Sbjct: 144 VPGLEKGKGMYFLFIKSEAKTPGGLVARPVLTSYYKSSHFKDRPFDPYTNYTSPNETILC 203

Query: 193 PDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRIT 252
           PD +QS+Y  +LCGL  R ++  V + FA   + A R  E  W+ LC+DIR G ++ +IT
Sbjct: 204 PDSYQSMYSQMLCGLCQRNDVLRVGAVFASGFIRAIRFLEKHWQLLCNDIRTGTVNPQIT 263

Query: 253 VPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKK 312
             S+R A+ KILKP+P+LAD I  +CS  S W G+I  L+PN KY+  I+TG+M  Y+  
Sbjct: 264 DLSVREAVMKILKPDPKLADFIAAECSQES-WQGIITRLWPNTKYVDVIVTGTMSQYIPT 322

Query: 313 LRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQV 372
           L +Y+  LPL+   Y SSE + G N+NP   P   ++ ++P + YFEF+P    N  +  
Sbjct: 323 LDYYSNGLPLVCTMYASSECYFGVNLNPLCKPSEVSYTLIPTMAYFEFLPVHRNNGVTNS 382

Query: 373 LCIEPKP---------VGLTEVKVGEEYEIIVTNVA 399
           + + PK          V L +VK+G+EYE++VT  A
Sbjct: 383 ISM-PKSLNEKEQQELVDLVDVKLGQEYELVVTTYA 417


>gi|297825207|ref|XP_002880486.1| GH3.3 [Arabidopsis lyrata subsp. lyrata]
 gi|297326325|gb|EFH56745.1| GH3.3 [Arabidopsis lyrata subsp. lyrata]
          Length = 594

 Score =  293 bits (749), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 154/385 (40%), Positives = 232/385 (60%), Gaps = 9/385 (2%)

Query: 17  FETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQ 76
            E + ++ + +Q + +R+IL  N+  EYL+  GL G TD ++FK+ VP+VT++DL+P IQ
Sbjct: 26  IEEMIRNVDFVQNKVIREILRRNSETEYLKRFGLKGFTDRKAFKTKVPVVTYDDLKPEIQ 85

Query: 77  RIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP- 135
           RI +GD S IL+  PIT    SSGT+ G+ K +P  +E M+    ++       N   P 
Sbjct: 86  RIANGDRSMILSSHPITEFLTSSGTSAGERKLMPTIEEDMDRRQLLYSLLMPVMNLYVPG 145

Query: 136 IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDF 195
           + KGKAL F++   +SKT GGL A    T+ Y+S  FK       +   SP+E I  PD 
Sbjct: 146 LDKGKALYFLFVKTESKTPGGLPARPVLTSYYKSEQFKRRPYDPYNVYTSPNEAILCPDS 205

Query: 196 HQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPS 255
            QS+Y  +LCGL+ R E+  + + FA  L+ A    +  W+EL +DI  G LSSRI+ P+
Sbjct: 206 SQSMYTQMLCGLLMRHEVLRLGAVFASGLLRAIGFLQTNWKELANDISTGTLSSRISDPA 265

Query: 256 IRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLR 314
           I+ +MSKIL KP+ ELAD I   C   +NW G+I +++PN KYL  I+TG+M  Y+  L 
Sbjct: 266 IKESMSKILTKPDQELADFITSVCGQDNNWEGIITKIWPNTKYLDVIVTGAMAQYIPMLE 325

Query: 315 HYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLC 374
           +Y+G LP+    Y SSE + G N+ P   P   ++ ++PN+ YFEF+P  +   +S++  
Sbjct: 326 YYSGGLPMACTMYASSESYFGINLKPMCKPSEVSYTIMPNMAYFEFLPHEVPTGKSEL-- 383

Query: 375 IEPKPVGLTEVKVGEEYEIIVTNVA 399
                V L +V+VG+EYE+++T  A
Sbjct: 384 -----VELADVEVGKEYELVITTYA 403


>gi|224105651|ref|XP_002313887.1| GH3 family protein [Populus trichocarpa]
 gi|222850295|gb|EEE87842.1| GH3 family protein [Populus trichocarpa]
          Length = 596

 Score =  291 bits (746), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 149/384 (38%), Positives = 226/384 (58%), Gaps = 5/384 (1%)

Query: 17  FETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQ 76
            E +T++A+ +Q + L KIL +N+  EYL+   L+G  D E+FKS +P++ +EDLQP IQ
Sbjct: 26  LEEMTRNADSVQEDVLAKILTQNSEVEYLKRFNLDGAIDRETFKSKIPMIRYEDLQPEIQ 85

Query: 77  RIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP- 135
           RI +GD S IL+  PI+    SSGT+ G+ K +P   + ++    ++       N   P 
Sbjct: 86  RIANGDRSSILSAHPISEFLTSSGTSAGERKLMPTIKQELDRRQLLYSLLMPVMNLYVPG 145

Query: 136 IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDF 195
           + KGK L F++   +++T GGL A    T+ Y+S  FK       +   SP+E I   D 
Sbjct: 146 LDKGKGLYFLFVKSETRTPGGLLARPVLTSYYKSDHFKTRPYDPYNVYTSPNEAILCADS 205

Query: 196 HQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPS 255
            QS+Y  +LCGL+ RE++  V + FA  L+ A R  +L W EL DDI  G+L+ +IT P+
Sbjct: 206 FQSMYTQMLCGLLEREQVLRVGAVFASGLLRAIRFLQLHWRELSDDIESGMLNKKITDPT 265

Query: 256 IRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRH 315
           ++  M  ILKPNP+LA+ +  +C G  NW G+I  ++PN KYL  I+TG+M  Y+  L +
Sbjct: 266 VKDCMVNILKPNPKLAEFVRMEC-GKENWEGIITRIWPNTKYLDVIVTGAMAQYIPTLDY 324

Query: 316 YAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCI 375
           Y+G LP     Y SSE + G N+NP   P    + ++PN+ YFEF+P     +       
Sbjct: 325 YSGGLPKACTMYASSECYFGLNLNPMCKPSEVCYTIMPNMAYFEFLPHEPAGISQDS--- 381

Query: 376 EPKPVGLTEVKVGEEYEIIVTNVA 399
            PK V L +V++G+EYE+++T  A
Sbjct: 382 TPKLVDLADVELGKEYELVITTYA 405


>gi|449486617|ref|XP_004157348.1| PREDICTED: LOW QUALITY PROTEIN: probable indole-3-acetic acid-amido
           synthetase GH3.1-like [Cucumis sativus]
          Length = 598

 Score =  291 bits (746), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 154/389 (39%), Positives = 230/389 (59%), Gaps = 10/389 (2%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           ++  + +T++A  +Q   L +IL  NAS EYL+   L+G TDP++FK+ +P++T+EDLQP
Sbjct: 23  LQFIDEMTRNAHAVQHTLLSEILSRNASTEYLRRYSLDGATDPQTFKAKLPVITYEDLQP 82

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNRE 133
            IQRI  GD SPIL+  PI+    SSGT+ G+ K +P   E ++    ++       N  
Sbjct: 83  EIQRIASGDRSPILSSHPISEFLTSSGTSAGERKLMPTIKEELDRRQLLYSLLMPVMNLY 142

Query: 134 FP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFG 192
            P + KGK L F++   +++T GGL A    T+ Y+S  FK           SP+E I  
Sbjct: 143 VPGLDKGKGLYFLFVKSETRTPGGLLARPVLTSYYKSDHFKTRPYDPFMVYTSPNEAILC 202

Query: 193 PDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRIT 252
           PD  QS+Y  +LCGL+ R ++  + + FA  L+ A R  +L W +L  DIR G L+SRIT
Sbjct: 203 PDSFQSMYTQMLCGLLQRNQVLRLGAVFASGLLRAIRFLQLNWHDLATDIRNGTLNSRIT 262

Query: 253 VPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKK 312
            PS+R  + KILKP+ +LAD +  +CS    W G++  ++P  KYL  I+TG+M  Y+  
Sbjct: 263 DPSLRDCIQKILKPDAQLADFVSDECSK-EEWEGIVTRIWPKTKYLDVIVTGAMAQYIPT 321

Query: 313 LRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIP--QRLGNLES 370
           L  Y+G LPL    Y SSE + G N+NP   P   ++ ++PN+ YFEF+P  Q  G+  S
Sbjct: 322 LDFYSGGLPLACTMYASSECYFGLNLNPMCKPSEVSYTIMPNMAYFEFLPLEQNSGSDSS 381

Query: 371 QVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
                 PK V L +V++G+EYE+++T  A
Sbjct: 382 ------PKLVDLVDVEMGKEYELVITTYA 404


>gi|449445927|ref|XP_004140723.1| PREDICTED: probable indole-3-acetic acid-amido synthetase
           GH3.1-like [Cucumis sativus]
          Length = 599

 Score =  291 bits (745), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 154/389 (39%), Positives = 230/389 (59%), Gaps = 10/389 (2%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           ++  + +T++A  +Q   L +IL  NAS EYL+   L+G TDP++FK+ +P++T+EDLQP
Sbjct: 23  LQFIDEMTRNAHAVQHTLLSEILSRNASTEYLRRYSLDGATDPQTFKAKLPVITYEDLQP 82

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNRE 133
            IQRI  GD SPIL+  PI+    SSGT+ G+ K +P   E ++    ++       N  
Sbjct: 83  EIQRIASGDRSPILSSHPISEFLTSSGTSAGERKLMPTIKEELDRRQLLYSLLMPVMNLY 142

Query: 134 FP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFG 192
            P + KGK L F++   +++T GGL A    T+ Y+S  FK           SP+E I  
Sbjct: 143 VPGLDKGKGLYFLFVKSETRTPGGLLARPVLTSYYKSDHFKTRPYDPFMVYTSPNEAILC 202

Query: 193 PDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRIT 252
           PD  QS+Y  +LCGL+ R ++  + + FA  L+ A R  +L W +L  DIR G L+SRIT
Sbjct: 203 PDSFQSMYTQMLCGLLQRNQVLRLGAVFASGLLRAIRFLQLNWHDLATDIRNGTLNSRIT 262

Query: 253 VPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKK 312
            PS+R  + KILKP+ +LAD +  +CS    W G++  ++P  KYL  I+TG+M  Y+  
Sbjct: 263 DPSLRDCIQKILKPDAQLADFVSDECSK-EEWEGIVTRIWPKTKYLDVIVTGAMAQYIPT 321

Query: 313 LRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIP--QRLGNLES 370
           L  Y+G LPL    Y SSE + G N+NP   P   ++ ++PN+ YFEF+P  Q  G+  S
Sbjct: 322 LDFYSGGLPLACTMYASSECYFGLNLNPMCKPSEVSYTIMPNMAYFEFLPLEQNSGSDSS 381

Query: 371 QVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
                 PK V L +V++G+EYE+++T  A
Sbjct: 382 ------PKLVDLVDVEMGKEYELVITTYA 404


>gi|224060651|ref|XP_002300248.1| GH3 family protein [Populus trichocarpa]
 gi|222847506|gb|EEE85053.1| GH3 family protein [Populus trichocarpa]
          Length = 596

 Score =  291 bits (745), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 153/383 (39%), Positives = 224/383 (58%), Gaps = 5/383 (1%)

Query: 18  ETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQR 77
           E +T+  + +Q + L KIL +NA  EYL+   L+G TD E+FKS +P + +EDLQP IQR
Sbjct: 27  EEMTRKTDSVQEDVLAKILIQNAEVEYLKRFNLDGATDRETFKSKLPTIRYEDLQPEIQR 86

Query: 78  IIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP-I 136
           I +GD S IL+  PI+    SSGT+ G+ K +P   + ++    ++       N   P +
Sbjct: 87  IANGDRSSILSTHPISEFLTSSGTSAGERKLMPTIKQELDRRQLLYSLLMPVMNLYVPGL 146

Query: 137 GKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFH 196
            KGK L F++   +++T GGL A    T+ Y+S  FK       +   SP+E I   D  
Sbjct: 147 DKGKGLYFLFVKSETRTPGGLLARPVLTSYYKSDHFKTRPYDPYNVYTSPNEAILCADSF 206

Query: 197 QSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPSI 256
           QS+Y  +LCGL+ RE++  V + FA  L+ A R  +L W EL DDI  G+L+  IT PS+
Sbjct: 207 QSMYTQMLCGLLEREQVLRVGAVFASGLLRAIRFLQLHWRELADDIESGMLNKEITDPSV 266

Query: 257 RAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRHY 316
           +  M KILKPNP+LA+ +  +CS   NW G+I  ++PN KYL  I+TG+M  Y+  L +Y
Sbjct: 267 KDCMVKILKPNPKLAEFVRMECSK-ENWEGIITRIWPNTKYLDVIVTGAMAQYIPTLDYY 325

Query: 317 AGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIE 376
           +G LPL    Y SSE + G N+NP   P    + ++PN+ YFEF+P              
Sbjct: 326 SGGLPLACTMYASSECYFGLNLNPMCKPSEVCYTIMPNMAYFEFLPHDPNGFTHDS---T 382

Query: 377 PKPVGLTEVKVGEEYEIIVTNVA 399
           PK V L +V++G+EYE+++T  A
Sbjct: 383 PKLVDLADVELGKEYELVITTYA 405


>gi|297836132|ref|XP_002885948.1| GH3.1 [Arabidopsis lyrata subsp. lyrata]
 gi|297331788|gb|EFH62207.1| GH3.1 [Arabidopsis lyrata subsp. lyrata]
          Length = 590

 Score =  291 bits (744), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 156/384 (40%), Positives = 224/384 (58%), Gaps = 13/384 (3%)

Query: 17  FETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQ 76
            E +T++A+ +Q   L +IL  NA+ EYL+   L G TD ++FK+ +P++T+EDLQP IQ
Sbjct: 26  IEEMTRNADTVQENLLAEILARNANTEYLRRFNLGGATDRDTFKTKIPVITYEDLQPEIQ 85

Query: 77  RIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP- 135
           RI DGD SPIL+  PI+    SSGT+ G+ K +P   E ++    ++       N   P 
Sbjct: 86  RIADGDRSPILSSHPISEFLTSSGTSAGERKLMPTIREELDRRQLLYSLLMPVMNLYVPG 145

Query: 136 IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDF 195
           + KGK + F++   +SKT GGL A    T+ Y+S  F++      +   SP+E I  PD 
Sbjct: 146 LDKGKGMYFLFVKSESKTPGGLPARPVLTSYYKSEHFRSRPYDPYNVYTSPNEAILCPDS 205

Query: 196 HQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPS 255
            QS+Y  +LCGL+ R  +  V + FA  L+ A R  +L W    +DI  G L S IT PS
Sbjct: 206 FQSMYTQMLCGLLDRLSVLRVGAVFASGLLRAIRFLQLHWSRFANDIELGCLDSEITDPS 265

Query: 256 IRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRH 315
           IR  MS ILKP+P LA+ I ++C    NW  +I  ++PN KYL  I+TG+M  Y+  L +
Sbjct: 266 IRQCMSGILKPDPVLAEFIRRECKS-DNWERIITRIWPNTKYLDVIVTGAMAQYIPTLEY 324

Query: 316 YAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCI 375
           Y+G LP+    Y SSE + G N+NP   P   ++ ++PN+ YFEFIP  LG         
Sbjct: 325 YSGGLPMACTMYASSECYFGLNLNPMSKPSEVSYTIMPNMAYFEFIP--LGGT------- 375

Query: 376 EPKPVGLTEVKVGEEYEIIVTNVA 399
             K V L +VK+G+EYE++VT  A
Sbjct: 376 --KAVELVDVKIGKEYELVVTTYA 397


>gi|312283481|dbj|BAJ34606.1| unnamed protein product [Thellungiella halophila]
          Length = 612

 Score =  290 bits (743), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 162/403 (40%), Positives = 237/403 (58%), Gaps = 25/403 (6%)

Query: 12  ELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDL 71
           +LIEE   +T +A+++QR  L +IL  NA  EYL+   L+GRTD E+FK+ +P++T+ED+
Sbjct: 26  QLIEE---LTSNADQVQRRVLEEILTRNADVEYLRRHDLDGRTDRETFKNVMPVITYEDI 82

Query: 72  QPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRN 131
           QP I RI +GD S IL+ KPI+    SSGT+ G+ K +P  +E ++    ++       +
Sbjct: 83  QPEINRIANGDKSHILSIKPISEFLTSSGTSGGERKLMPTIEEELDRRSLLYSLLMPVMS 142

Query: 132 REFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVI 190
           +  P + KGK + F++   +SKT GGL A    T+ Y+SS FK       +   SP+E I
Sbjct: 143 QFVPGLDKGKGMYFLFIKSESKTPGGLPARPVLTSYYKSSHFKERPFDPYTNYTSPNETI 202

Query: 191 FGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSR 250
             PD +QS+Y  +LCGL   +E+  V + FA   + A +  E  W EL  DIR GVLSS 
Sbjct: 203 LCPDSYQSMYSQMLCGLCQHQEVLRVGAVFASGFIRAIKFLEKHWTELVCDIRTGVLSSL 262

Query: 251 ITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYL 310
           IT PS+R A++KILKPNP+LAD +  +C   S W G+I  L+PN KY+  I+TG+M  Y+
Sbjct: 263 ITDPSVREAVAKILKPNPKLADFVESECKKKS-WQGIITRLWPNTKYVDVIVTGTMSQYI 321

Query: 311 KKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEF---------- 360
             L +Y+  LPL+   Y SSE + G N+ P   P   ++ ++P + YFEF          
Sbjct: 322 PTLDYYSNGLPLVCTMYASSECYFGVNLKPLCKPSEVSYTLIPTMAYFEFLPVHRNTGVT 381

Query: 361 ----IPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
               +P+ L   E Q L      V L +VK+G+EYE++VT  A
Sbjct: 382 NSINLPKALTEKEQQEL------VDLVDVKLGQEYELVVTTYA 418


>gi|300680026|gb|ADK27717.1| GH3 [Dimocarpus longan]
          Length = 598

 Score =  290 bits (741), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 156/387 (40%), Positives = 227/387 (58%), Gaps = 3/387 (0%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           ++  E +T +A  +Q   L +IL +NA  EYL+   L+G TD +SFKS +P+VT+EDLQ 
Sbjct: 23  LQFIEEMTTNANAVQETVLAEILRQNAETEYLRRFKLDGATDRDSFKSKIPVVTYEDLQT 82

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNRE 133
            I+RI DGD S IL+  P++    SSGT+ G+ K +P     ++    ++       N  
Sbjct: 83  EIKRIADGDRSAILSSHPVSEFLTSSGTSAGERKLMPTIHAELDRRQLLYSLLMPVMNLY 142

Query: 134 FP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFG 192
            P + KGK L F++   +SKT GGL A    T+ Y+S  FK       +   SP+E I  
Sbjct: 143 VPGLDKGKGLYFLFVKAESKTPGGLLARPVLTSYYKSEHFKTRPYDPFNIYTSPNEAILC 202

Query: 193 PDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRIT 252
            D  QS+Y  +LCGL+ REE+  V + FA  L+ A R  +L W++L DDI  G L+ +IT
Sbjct: 203 ADSFQSMYTQMLCGLLMREEVLRVGAVFASGLLRAIRFLQLNWKQLADDISTGSLNPKIT 262

Query: 253 VPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKK 312
            PS+R  M+KILKPNPELA+ I K+CSG  NW G+I  ++PN KYL  I+TG+M  Y+  
Sbjct: 263 DPSLRDCMTKILKPNPELAEFITKECSG-ENWDGIITRIWPNTKYLDVIVTGAMAQYIPT 321

Query: 313 LRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQV 372
           L +Y+  LP+    Y SSE + G N+ P   P   ++ ++PN+GYFEF+P          
Sbjct: 322 LDYYSRGLPMACTMYASSECYFGLNLRPMCKPSEVSYTIMPNMGYFEFMPHDPAAPPPSR 381

Query: 373 LCIEPKPVGLTEVKVGEEYEIIVTNVA 399
                + V L +V+VG +YE+++T  A
Sbjct: 382 DSPP-RLVDLADVEVGTDYELVITTYA 407


>gi|15237038|ref|NP_194456.1| indole-3-acetic acid-amido synthetase GH3.5 [Arabidopsis thaliana]
 gi|62900128|sp|O81829.1|GH35_ARATH RecName: Full=Indole-3-acetic acid-amido synthetase GH3.5; AltName:
           Full=Auxin-responsive GH3-like protein 5; Short=AtGH3-5
 gi|3269287|emb|CAA19720.1| GH3 like protein [Arabidopsis thaliana]
 gi|7269579|emb|CAB79581.1| GH3 like protein [Arabidopsis thaliana]
 gi|17979055|gb|AAL49795.1| putative GH3 protein [Arabidopsis thaliana]
 gi|20465961|gb|AAM20166.1| putative GH3 protein [Arabidopsis thaliana]
 gi|98621984|gb|ABF58888.1| auxin-responsive GH3-like [Arabidopsis thaliana]
 gi|332659918|gb|AEE85318.1| indole-3-acetic acid-amido synthetase GH3.5 [Arabidopsis thaliana]
          Length = 612

 Score =  289 bits (739), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 158/398 (39%), Positives = 239/398 (60%), Gaps = 15/398 (3%)

Query: 12  ELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDL 71
           +LIEE   +T +A+++QR+ L +IL  NA  EYL+   LNGRTD E+FK+ +P++T+ED+
Sbjct: 26  QLIEE---LTSNADQVQRQVLEEILTRNADVEYLRRHDLNGRTDRETFKNIMPVITYEDI 82

Query: 72  QPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRN 131
           +P I RI +GD SPIL+ KPI+    SSGT+ G+ K +P  +E ++    ++       +
Sbjct: 83  EPEINRIANGDKSPILSSKPISEFLTSSGTSGGERKLMPTIEEELDRRSLLYSLLMPVMS 142

Query: 132 REFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVI 190
           +  P +  GK + F++   +SKT GGL A    T+ Y+SS FK       +   SP+E I
Sbjct: 143 QFVPGLENGKGMYFLFIKSESKTPGGLPARPVLTSYYKSSHFKERPYDPYTNYTSPNETI 202

Query: 191 FGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSR 250
              D +QS+Y  +LCGL   +E+  V + FA   + A +  E  W EL  DIR G LSS 
Sbjct: 203 LCSDSYQSMYSQMLCGLCQHQEVLRVGAVFASGFIRAIKFLEKHWIELVRDIRTGTLSSL 262

Query: 251 ITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYL 310
           IT PS+R A++KILKP+P+LAD +  +C   S+W G+I  L+PN KY+  I+TG+M  Y+
Sbjct: 263 ITDPSVREAVAKILKPSPKLADFVEFECKK-SSWQGIITRLWPNTKYVDVIVTGTMSQYI 321

Query: 311 KKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLES 370
             L +Y+  LPL+   Y SSE + G N+ P   P   ++ ++P++ YFEF+P    N  +
Sbjct: 322 PTLDYYSNGLPLVCTMYASSECYFGVNLRPLCKPSEVSYTLIPSMAYFEFLPVHRNNGVT 381

Query: 371 QVLCIEPKP---------VGLTEVKVGEEYEIIVTNVA 399
             + + PK          V L +VK+G+EYE++VT  A
Sbjct: 382 NSINL-PKALTEKEQQELVDLVDVKLGQEYELVVTTYA 418


>gi|226505340|ref|NP_001146837.1| indole-3-acetic acid amido synthetase [Zea mays]
 gi|209405345|gb|ACI46149.1| indole-3-acetic acid amido synthetase [Zea mays]
          Length = 610

 Score =  288 bits (738), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 153/391 (39%), Positives = 229/391 (58%), Gaps = 12/391 (3%)

Query: 12  ELIEEFETITKDAERIQRETLRKILEENASAEYLQN-LGLNGRTDPESFKSCVPLVTHED 70
           E ++  E +T + + +Q   L +IL  NA  EYL    GL G TD  +F++ VP+ T+ED
Sbjct: 35  EKLQFIEDMTSNVDAVQERVLGEILARNADTEYLAGRCGLAGATDRATFRAKVPMATYED 94

Query: 71  LQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLP-FNDELMETTLQIFRTSYAF 129
           LQPYI+RI DGD SPIL+G P++    SSGT+ G+ K +P   DEL    L ++      
Sbjct: 95  LQPYIRRIADGDRSPILSGHPVSEFLTSSGTSGGERKLMPTIEDELNRRQL-LYSLQMPV 153

Query: 130 RNREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDE 188
            N   P + KGKAL F++   ++KT GGL A    T+ Y+S+ F+       +   SP  
Sbjct: 154 MNLYVPGMDKGKALHFLFVKSETKTPGGLAARPVLTSYYKSNHFRNRPFDAYNNYTSPTA 213

Query: 189 VIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLS 248
            I   D  QS+Y  ++CGL  R+++  V + FA  L+ A R  +L WE+L DDI  G L+
Sbjct: 214 AILCADAFQSMYAQMVCGLCQRQDVLRVGAVFASGLLRAIRFLQLNWEQLADDIEAGSLT 273

Query: 249 SRITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEH 308
            R+T PS+R A++ IL+P+P +A+L+  +CSG  +W G++  ++PN KYL  I+TG+M  
Sbjct: 274 PRVTDPSVREAVAGILRPDPAVAELVRSECSG-GDWAGIVTRIWPNTKYLDVIVTGAMAQ 332

Query: 309 YLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNL 368
           Y+  L+HY+G LP+    Y SSE + G N+ P   P   ++ ++PN+ YFEF+P      
Sbjct: 333 YIPTLKHYSGGLPMACTMYASSECYFGLNLRPMCDPSEVSYTLMPNMCYFEFLPMGGAVD 392

Query: 369 ESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
            SQ+       V L  V+ G EYE+++T  A
Sbjct: 393 ASQL-------VDLARVERGREYELVITTYA 416


>gi|18591|emb|CAA42636.1| auxin-responsive GH3 product [Glycine max]
          Length = 593

 Score =  288 bits (737), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 153/382 (40%), Positives = 229/382 (59%), Gaps = 4/382 (1%)

Query: 18  ETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQR 77
           E +T++ E +Q   L +IL +N+  EYL+   LNG TD ++FKS VP+V+++DL+  I R
Sbjct: 19  EDMTQNTESVQERVLAEILSQNSQTEYLKRFELNGATDRDTFKSKVPVVSYDDLKHDIHR 78

Query: 78  IIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREF-PI 136
           I +GD SPIL   PI+    SSGT+ G+ K +P   + M+    IF       N+    +
Sbjct: 79  IANGDRSPILCAHPISEFLTSSGTSAGERKLMPTIRQEMDRRQLIFSLPMPVMNQYVTDM 138

Query: 137 GKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFH 196
            KGKAL F++   + KT  GL A   + ++Y+S  FK       +   SPDE I  PD  
Sbjct: 139 DKGKALIFLFTKAEQKTPSGLVARPVSASMYKSDQFKNRPYDPYNVYTSPDEAILCPDSF 198

Query: 197 QSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPSI 256
           QS+Y  +LCGLI R ++  V + FA  L+ +    +L W +L  DI  G L+ +IT P+I
Sbjct: 199 QSMYTQMLCGLIMRHQVLRVGANFASGLLRSIHLLQLNWAQLSHDISTGTLNPKITDPAI 258

Query: 257 RAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRHY 316
           +  M++ILKP+PELA+ I K+CSG  NW  +IP ++PN KY+  ++TG+M  Y+  L +Y
Sbjct: 259 KQRMTQILKPDPELAEFIVKECSG-ENWERIIPRIWPNTKYVEVVVTGAMAQYVPTLDYY 317

Query: 317 AGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLC-- 374
           +G LPL S  YGSSE + G N+NP   P   ++ ++PN+GYFEF+PQ   +  S      
Sbjct: 318 SGGLPLASNIYGSSECFFGINLNPFCNPSDVSYTIMPNMGYFEFLPQDHDDASSSSGSSF 377

Query: 375 IEPKPVGLTEVKVGEEYEIIVT 396
              + + L +V++G+ YEI+VT
Sbjct: 378 TLSRLIDLDDVELGKSYEIVVT 399


>gi|297803374|ref|XP_002869571.1| GH3.5/WES1 [Arabidopsis lyrata subsp. lyrata]
 gi|297315407|gb|EFH45830.1| GH3.5/WES1 [Arabidopsis lyrata subsp. lyrata]
          Length = 612

 Score =  288 bits (736), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 159/398 (39%), Positives = 236/398 (59%), Gaps = 15/398 (3%)

Query: 12  ELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDL 71
           +LIEE   +T +A++ QR  L +IL  NA  EYL+   LNGRTD E+FK+ +P++T+ED+
Sbjct: 26  QLIEE---LTSNADQFQRRVLEEILSRNADVEYLRRHYLNGRTDRETFKNVMPVITYEDI 82

Query: 72  QPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRN 131
           QP I RI +GD SPIL+ KPI+    SSGT+ G+ K +P  +E ++    ++       +
Sbjct: 83  QPEINRIANGDKSPILSSKPISEFLTSSGTSGGERKLMPTIEEELDRRSLLYSLLMPVMS 142

Query: 132 REFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVI 190
           +  P +  GK + F++   +SKT GGL A    T+ Y+SS FK       +   SP+E I
Sbjct: 143 QFVPGLENGKGMYFLFIKSESKTPGGLPARPVLTSYYKSSHFKERPYDPYTNYTSPNETI 202

Query: 191 FGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSR 250
              D +QS+Y  +LCGL   +E+  V + FA   + A +  E  W EL  DIR G LSS 
Sbjct: 203 LCSDSYQSMYSQMLCGLCQHQEVLRVGAVFASGFIRAIKFLEKHWTELVRDIRTGTLSSL 262

Query: 251 ITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYL 310
           IT PS+R A+SKILKPN +LA+ +  +C   S+W G+I  L+PN KY+  I+TG+M  Y+
Sbjct: 263 ITDPSVREAVSKILKPNSKLAEFVEFECKK-SSWQGIITRLWPNTKYVDVIVTGTMSQYI 321

Query: 311 KKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLES 370
             L +Y+  LPL+   Y SSE + G N+ P   P   ++ ++P++ YFEF+P    N  +
Sbjct: 322 PTLDYYSNGLPLVCTMYASSECYFGVNLRPLCKPSEVSYTLIPSMAYFEFLPVHRNNGVT 381

Query: 371 QVLCIEPKP---------VGLTEVKVGEEYEIIVTNVA 399
             + + PK          V L +VK+G+EYE++VT  A
Sbjct: 382 NSINL-PKALTEKEQQELVDLVDVKLGQEYELVVTTYA 418


>gi|356511921|ref|XP_003524670.1| PREDICTED: probable indole-3-acetic acid-amido synthetase
           GH3.1-like [Glycine max]
          Length = 594

 Score =  288 bits (736), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 153/383 (39%), Positives = 229/383 (59%), Gaps = 5/383 (1%)

Query: 18  ETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQR 77
           E +T++ E +Q   L +IL +N+  EYL+   LNG TD ++FKS VP+V+++DL+  I R
Sbjct: 19  EDMTQNTESVQERVLAEILSQNSQTEYLKRFELNGATDRDTFKSKVPVVSYDDLKHDIHR 78

Query: 78  IIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP-I 136
           I +GD SPIL   PI+    SSGT+ G+ K +P   + M+    IF       N+    +
Sbjct: 79  IANGDRSPILCAHPISEFLTSSGTSAGERKLMPTIRQEMDRRQLIFSLPMPVMNQYVTDM 138

Query: 137 GKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFH 196
            KGKAL F++   + KT  GL A   + ++Y+S  FK       +   SPDE I  PD  
Sbjct: 139 DKGKALIFLFTKAEQKTPSGLVARPVSASMYKSDQFKNRPYDPYNVYTSPDEAILCPDSF 198

Query: 197 QSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPSI 256
           QS+Y  +LCGLI R ++  V + FA  L+ +    +L W +L  DI  G L+ +IT P+I
Sbjct: 199 QSMYTQMLCGLIMRHQVLRVGANFASGLLRSIHLLQLNWAQLSHDISTGTLNPKITDPAI 258

Query: 257 RAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRHY 316
           +  M++ILKP+PELA+ I K+CSG  NW  +IP ++PN KY+  ++TG+M  Y+  L +Y
Sbjct: 259 KQRMTQILKPDPELAEFIVKECSG-ENWERIIPRIWPNTKYVEVVVTGAMAQYVPTLDYY 317

Query: 317 AGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIE 376
           +G LPL S  YGSSE + G N+NP   P   ++ ++PN+GYFEF+PQ   +  S      
Sbjct: 318 SGGLPLASNIYGSSECFFGINLNPFCNPSDVSYTIMPNMGYFEFLPQDHDDDASSSSGSS 377

Query: 377 ---PKPVGLTEVKVGEEYEIIVT 396
               + + L +V++G+ YEI+VT
Sbjct: 378 FTLSRLIDLDDVELGKSYEIVVT 400


>gi|302788067|ref|XP_002975803.1| hypothetical protein SELMODRAFT_103740 [Selaginella moellendorffii]
 gi|300156804|gb|EFJ23432.1| hypothetical protein SELMODRAFT_103740 [Selaginella moellendorffii]
          Length = 598

 Score =  287 bits (734), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 155/393 (39%), Positives = 230/393 (58%), Gaps = 7/393 (1%)

Query: 12  ELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDL 71
           + ++  E +T +A  +Q   L  ILE NA  EYL+  GLNGRTD  SF+ C+P++T+EDL
Sbjct: 11  QALQFIEKVTSEAAEVQSAVLSAILERNAHTEYLKRHGLNGRTDKASFRQCLPVITYEDL 70

Query: 72  QPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRN 131
           +P IQRI +GD SPIL+  PI+    SSGT+ G+ K +P   E  E    ++       N
Sbjct: 71  EPEIQRIANGDTSPILSAHPISEFLTSSGTSAGQRKLMPTISEEFERRCLLYSLLMPVMN 130

Query: 132 REFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVI 190
           +  P + +GK +   +   ++KT GGL A    T+ Y+S  F        +   SP+E +
Sbjct: 131 QYLPGLDQGKGMYLFFIKSEAKTPGGLLARPVLTSYYKSRYFTERPYDPCNVYTSPNETV 190

Query: 191 FGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSR 250
             PD HQS+YC LLCGL+ R E+  + + FA   + A R  E  W ELCDDIR G L+  
Sbjct: 191 LCPDAHQSMYCQLLCGLLQRHEVLRMGAVFASGFLRAIRFLETHWRELCDDIRAGGLNEL 250

Query: 251 ITVPSIRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHY 309
           +   + R A+  ++ +P+P LAD I ++C   S W G+I  L+PN KY+  I+TG+M  Y
Sbjct: 251 VVDAAARRAVLALMPRPDPALADDIAEQCRKES-WAGIIARLWPNTKYIDVIVTGTMAQY 309

Query: 310 LKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLE 369
           +  L +Y+G LPL+   Y SSE + G N+ P  PP   ++ +LPN+ YFEF+P +  + +
Sbjct: 310 IPTLDYYSGGLPLVCTMYASSECYFGINLQPLCPPSEVSYTLLPNMAYFEFLPIKPKSGK 369

Query: 370 SQVLCIEPKP---VGLTEVKVGEEYEIIVTNVA 399
           S+   + P P   V L +VK+G EYE+++T  A
Sbjct: 370 SKAARV-PDPSELVELVDVKMGHEYELVITTYA 401


>gi|356499966|ref|XP_003518806.1| PREDICTED: probable indole-3-acetic acid-amido synthetase
           GH3.1-like [Glycine max]
          Length = 595

 Score =  287 bits (734), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 154/391 (39%), Positives = 228/391 (58%), Gaps = 22/391 (5%)

Query: 18  ETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQR 77
           E +T++A+ +Q   L +IL  NA  EYL+   L+G  D ++FKS +P++T+ED+QP IQR
Sbjct: 27  EEMTRNADAVQERVLEEILTRNAQTEYLKRFELDGAADRQAFKSKIPVITYEDVQPEIQR 86

Query: 78  IIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP-I 136
           I +GD SPIL+  PI+    SSGT+ G+ K +P   E ++    ++       N   P +
Sbjct: 87  IANGDRSPILSAHPISEFLTSSGTSAGERKLMPTIKEELDRRQLLYSLLMPVMNLYVPGL 146

Query: 137 GKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFH 196
            KGK L F++   +++T GGL A    T+ Y+S  FK       +   SP+E I   D  
Sbjct: 147 DKGKGLYFLFVKSETRTPGGLLARPVLTSYYKSDHFKTRPYDPYNVYTSPNEAILCSDSF 206

Query: 197 QSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPSI 256
           QS+Y  +LCGLI R  +  + + FA  L+ A R  +L W EL  DI+ G L+SRIT P+I
Sbjct: 207 QSMYTQMLCGLIERHHVLRLGAVFASGLLRAIRFLQLNWPELAHDIQTGTLNSRITDPAI 266

Query: 257 RAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRHY 316
           R+ M K+LK +PELA  + ++CS   NW G+I  ++PN KYL  I+TG+M  Y+  L +Y
Sbjct: 267 RSYMDKVLKSDPELAQFVTQQCSK-DNWEGIITRIWPNTKYLDVIVTGAMAQYIPTLNYY 325

Query: 317 A-GDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCI 375
           + G LPL    Y SSE + G N+NP   P   ++ ++PN+ YFEF+P             
Sbjct: 326 SGGGLPLACTMYASSECYFGLNLNPMCKPSEVSYTIMPNMAYFEFLPH------------ 373

Query: 376 EPKP-------VGLTEVKVGEEYEIIVTNVA 399
           +PKP       V L +V+VG+EYE+++T  A
Sbjct: 374 DPKPGSTSSKLVELADVEVGKEYELVITTYA 404


>gi|15226032|ref|NP_179101.1| putative indole-3-acetic acid-amido synthetase GH3.1 [Arabidopsis
           thaliana]
 gi|62900130|sp|O82333.1|GH31_ARATH RecName: Full=Probable indole-3-acetic acid-amido synthetase GH3.1;
           AltName: Full=Auxin-responsive GH3-like protein 1;
           Short=AtGH3-1
 gi|3650037|gb|AAC61292.1| putative auxin-regulated protein [Arabidopsis thaliana]
 gi|330251259|gb|AEC06353.1| putative indole-3-acetic acid-amido synthetase GH3.1 [Arabidopsis
           thaliana]
          Length = 590

 Score =  286 bits (733), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 154/384 (40%), Positives = 221/384 (57%), Gaps = 13/384 (3%)

Query: 17  FETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQ 76
            E +T++A+ +Q   L +IL  NA  EYL+   L G TD ++FK+ +P++T+EDLQP IQ
Sbjct: 26  IEEMTRNADTVQENLLAEILARNADTEYLRRFNLCGATDRDTFKTKIPVITYEDLQPEIQ 85

Query: 77  RIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP- 135
           RI DGD SPIL+  PI+    SSGT+ G+ K +P   E ++    ++       N   P 
Sbjct: 86  RIADGDRSPILSAHPISEFLTSSGTSAGERKLMPTIKEELDRRQLLYSLLMPVMNLYVPG 145

Query: 136 IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDF 195
           + KGK + F++   ++KT GGL A    T+ Y+S  F++      +   SP+E I  PD 
Sbjct: 146 LDKGKGMYFLFVKSETKTPGGLPARPVLTSYYKSEHFRSRPYDPYNVYTSPNEAILCPDS 205

Query: 196 HQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPS 255
            QS+Y  +LCGL+ R  +  V + FA  L+ A R  +L W     DI  G L S IT PS
Sbjct: 206 FQSMYTQMLCGLLDRLSVLRVGAVFASGLLRAIRFLQLHWSRFAHDIELGCLDSEITDPS 265

Query: 256 IRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRH 315
           IR  MS ILKP+P LA+ I ++C    NW  +I  ++PN KYL  I+TG+M  Y+  L +
Sbjct: 266 IRQCMSGILKPDPVLAEFIRRECKS-DNWEKIITRIWPNTKYLDVIVTGAMAQYIPTLEY 324

Query: 316 YAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCI 375
           Y+G LP+    Y SSE + G N+NP   P   ++ ++PN+ YFEFIP  LG         
Sbjct: 325 YSGGLPMACTMYASSECYFGLNLNPMSKPSEVSYTIMPNMAYFEFIP--LGGT------- 375

Query: 376 EPKPVGLTEVKVGEEYEIIVTNVA 399
             K V L +V +G+EYE++VT  A
Sbjct: 376 --KAVELVDVNIGKEYELVVTTYA 397


>gi|225438898|ref|XP_002283886.1| PREDICTED: probable indole-3-acetic acid-amido synthetase GH3.1
           [Vitis vinifera]
          Length = 600

 Score =  286 bits (732), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 153/389 (39%), Positives = 232/389 (59%), Gaps = 7/389 (1%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           ++  E +T++ +++Q + L +IL +N   EYLQ   L G TD ++FKS VP+VT+EDLQP
Sbjct: 23  LQFIEEMTRNPDQVQEKILAEILSQNGETEYLQRFKLAGATDRDTFKSKVPVVTYEDLQP 82

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNRE 133
            IQRI +GD SPIL+  PI+    SSGT+ G+ K +P   E  +   +++       N  
Sbjct: 83  DIQRIANGDRSPILSSHPISEFLTSSGTSAGERKLMPTIHEEWDRRQKLYSLLMPVMNLY 142

Query: 134 FP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFG 192
            P + KGK L F++   ++KT  GL A    T  YRS  FK       +   SPDE I  
Sbjct: 143 VPGLDKGKGLYFLFVKSETKTPSGLVARPVLTGYYRSEHFKKRPYDPYNVYTSPDEAILC 202

Query: 193 PDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRIT 252
            D  QS+Y  +LCGL+  +E+  V + FA  L+ A R  ++ W++L  DI  G+L+ +IT
Sbjct: 203 VDSFQSMYAQMLCGLLMHKEVLRVGAVFASGLLRAIRFLQVHWQQLAHDISTGILNPKIT 262

Query: 253 VPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKK 312
            PS+R  ++ ILKP+ ELAD I ++CSG  NW  +I  ++PN KYL  I+TG+M  Y+  
Sbjct: 263 DPSVREGLAGILKPSQELADFIIQECSG-GNWERIITRIWPNTKYLDVIVTGAMAQYIPT 321

Query: 313 LRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQV 372
           L +++G +PL    Y SSE + G N+ P   P   ++ ++PN+GYFEF+P    +  +  
Sbjct: 322 LDYFSGGIPLACTMYASSECYFGLNLKPMSKPSEVSYTIMPNMGYFEFLPH---DPSAPP 378

Query: 373 LCIE--PKPVGLTEVKVGEEYEIIVTNVA 399
           L  +  P+ V L +V+VG+EYE+++T  A
Sbjct: 379 LSRDSPPRLVDLADVEVGKEYELVITTYA 407


>gi|302783965|ref|XP_002973755.1| hypothetical protein SELMODRAFT_99818 [Selaginella moellendorffii]
 gi|300158793|gb|EFJ25415.1| hypothetical protein SELMODRAFT_99818 [Selaginella moellendorffii]
          Length = 598

 Score =  286 bits (732), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 155/393 (39%), Positives = 230/393 (58%), Gaps = 7/393 (1%)

Query: 12  ELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDL 71
           + ++  E +T +A  +Q   L  ILE NA  EYL+  GLNGRTD  SF+ C+P++T+EDL
Sbjct: 11  QALQFIEKVTSEAAEVQSAVLSAILERNAHTEYLKRHGLNGRTDKTSFRQCLPVITYEDL 70

Query: 72  QPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRN 131
           +P IQRI +GD SPIL+  PI+    SSGT+ G+ K +P   E  E    ++       N
Sbjct: 71  EPEIQRIANGDTSPILSAHPISEFLTSSGTSAGQRKLMPTISEEFERRCLLYSLLMPVMN 130

Query: 132 REFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVI 190
           +  P + +GK +   +   ++KT GGL A    T+ Y+S  F        +   SP+E +
Sbjct: 131 QYLPGLDQGKGMYLFFIKSEAKTPGGLLARPVLTSYYKSRYFTERPYDPCNVYTSPNETV 190

Query: 191 FGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSR 250
             PD HQS+YC LLCGL+ R E+  + + FA   + A R  E  W ELCDDIR G L+  
Sbjct: 191 LCPDAHQSMYCQLLCGLLQRHEVLRMGAVFASGFLRAIRFLETHWRELCDDIRAGGLNEL 250

Query: 251 ITVPSIRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHY 309
           +   + R A+  ++ +P+P LAD I ++C   S W G+I  L+PN KY+  I+TG+M  Y
Sbjct: 251 VVDAAARRAVLALMPRPDPALADDIAEQCRKES-WAGIIARLWPNTKYIDVIVTGTMAQY 309

Query: 310 LKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLE 369
           +  L +Y+G LPL+   Y SSE + G N+ P  PP   ++ +LPN+ YFEF+P +  + +
Sbjct: 310 IPTLDYYSGGLPLVCTMYASSECYFGINLQPLCPPSEVSYTLLPNMAYFEFLPIKPKSGK 369

Query: 370 SQVLCIEPKP---VGLTEVKVGEEYEIIVTNVA 399
           S+   + P P   V L +VK+G EYE+++T  A
Sbjct: 370 SKAPRV-PDPSELVELVDVKMGHEYELVITTYA 401


>gi|414590728|tpg|DAA41299.1| TPA: indole-3-acetic acid amido synthetase [Zea mays]
          Length = 614

 Score =  286 bits (732), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 152/391 (38%), Positives = 230/391 (58%), Gaps = 12/391 (3%)

Query: 12  ELIEEFETITKDAERIQRETLRKILEENASAEYLQN-LGLNGRTDPESFKSCVPLVTHED 70
           E ++  E +T + + +Q   L +IL  NA  EYL +  GL G TD  +F++ VP+ T+ED
Sbjct: 35  EKLQFIEDMTSNVDAVQERVLGEILARNADTEYLSSRCGLAGATDRATFRAKVPMATYED 94

Query: 71  LQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLP-FNDELMETTLQIFRTSYAF 129
           LQPYI+RI DGD SPIL+G P++    SSGT+ G+ K +P   DEL    L ++      
Sbjct: 95  LQPYIRRIADGDRSPILSGHPVSEFLTSSGTSGGERKLMPTIEDELNRRQL-LYSLQMPV 153

Query: 130 RNREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDE 188
            N   P + KGKAL F++   ++KT GGL A    T+ Y+S+ F+       +   SP  
Sbjct: 154 MNLYVPGMDKGKALHFLFVKSETKTPGGLAARPVLTSYYKSNHFRNRPFDAYNNYTSPTA 213

Query: 189 VIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLS 248
            I   D  QS+Y  ++CGL  R+++  V + FA  L+ A R  +L WE+L +DI  G L+
Sbjct: 214 AILCADAFQSMYAQMVCGLCQRQDVLRVGAVFASGLLRAIRFLQLNWEQLAEDIEAGSLT 273

Query: 249 SRITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEH 308
            R+T PS+R A++ IL+P+P +A+L+  +CSG  +W G++  ++PN KYL  I+TG+M  
Sbjct: 274 PRVTDPSVREAVAGILRPDPAVAELVRSECSG-GDWAGIVTRIWPNTKYLDVIVTGAMAQ 332

Query: 309 YLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNL 368
           Y+  L+HY+G LP+    Y SSE + G N+ P   P   ++ ++PN+ YFEF+P      
Sbjct: 333 YIPTLKHYSGGLPMACTMYASSECYFGLNLRPMCDPSEVSYTLMPNMCYFEFLPMGGAVD 392

Query: 369 ESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
            SQ+       V L  V+ G EYE+++T  A
Sbjct: 393 ASQL-------VDLGRVERGREYELVITTYA 416


>gi|147783384|emb|CAN70815.1| hypothetical protein VITISV_042944 [Vitis vinifera]
          Length = 607

 Score =  286 bits (731), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 153/389 (39%), Positives = 232/389 (59%), Gaps = 7/389 (1%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           ++  E +T++ +++Q + L +IL +N   EYLQ   L G TD ++FKS VP+VT+EDLQP
Sbjct: 23  LQFIEEMTRNPDQVQEKILAEILSQNGETEYLQRFKLAGATDRDTFKSKVPVVTYEDLQP 82

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNRE 133
            IQRI +GD SPIL+  PI+    SSGT+ G+ K +P   E  +   +++       N  
Sbjct: 83  DIQRIANGDRSPILSSHPISEFLTSSGTSAGERKLMPTIHEEWDRRQKLYSLLMPVMNLY 142

Query: 134 FP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFG 192
            P + KGK L F++   ++KT  GL A    T  YRS  FK       +   SPDE I  
Sbjct: 143 VPGLDKGKGLYFLFVKSETKTPSGLVARPVLTGYYRSEHFKKRPYDPYNVYTSPDEAILC 202

Query: 193 PDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRIT 252
            D  QS+Y  +LCGL+  +E+  V + FA  L+ A R  ++ W++L  DI  G+L+ +IT
Sbjct: 203 VDSFQSMYAQMLCGLLMNKEVLRVGAVFASGLLRAIRFLQVHWQQLAHDISTGILNPKIT 262

Query: 253 VPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKK 312
            PS+R  ++ ILKP+ ELAD I ++CSG  NW  +I  ++PN KYL  I+TG+M  Y+  
Sbjct: 263 DPSVREGLAGILKPSQELADFIIQECSG-GNWERIITRIWPNTKYLDVIVTGAMAQYIPT 321

Query: 313 LRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQV 372
           L +++G +PL    Y SSE + G N+ P   P   ++ ++PN+GYFEF+P    +  +  
Sbjct: 322 LDYFSGGIPLACTMYASSECYFGLNLKPMSKPSEVSYTIMPNMGYFEFLPH---DPSAPP 378

Query: 373 LCIE--PKPVGLTEVKVGEEYEIIVTNVA 399
           L  +  P+ V L +V+VG+EYE+++T  A
Sbjct: 379 LSRDSPPRLVDLADVEVGKEYELVITTYA 407


>gi|255573073|ref|XP_002527466.1| Indole-3-acetic acid-amido synthetase GH3.3, putative [Ricinus
           communis]
 gi|223533106|gb|EEF34864.1| Indole-3-acetic acid-amido synthetase GH3.3, putative [Ricinus
           communis]
          Length = 597

 Score =  285 bits (730), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 159/388 (40%), Positives = 230/388 (59%), Gaps = 6/388 (1%)

Query: 13  LIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQ 72
           LIEE   +T++A+ +Q + L +IL  N   EYL+   L+G TD E+FKS +P+VT+EDLQ
Sbjct: 25  LIEE---MTRNADLVQEKVLAEILNRNKDVEYLKKFNLDGATDRETFKSKLPMVTYEDLQ 81

Query: 73  PYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNR 132
           P IQRI +GD S IL+  PI+    SSGT+ G+ K +P   E ++    ++       N 
Sbjct: 82  PEIQRIANGDRSAILSAHPISEFLTSSGTSAGERKLMPTIKEELDRRQLLYSLLMPVMNL 141

Query: 133 EFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIF 191
             P + KGK L F++   +++T GGL A    T+ Y+S  FK       +   SP+E I 
Sbjct: 142 YVPGLDKGKGLYFLFVKSETRTPGGLLARPVLTSYYKSDHFKTRPYDPYNVYTSPNESIL 201

Query: 192 GPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRI 251
            PD  QS+Y  +LCGL+ R ++  V + FA  L+ A    +L W+EL  DI  G L+ R+
Sbjct: 202 CPDSFQSMYSQMLCGLLERHQVLRVGAVFASGLLRAISFLQLNWQELARDIMSGTLNKRV 261

Query: 252 TVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLK 311
           T PSIR  ++K+LKP+PELA+ I  +CS   NW G+I  ++PN KYL  I+TG+M  Y+ 
Sbjct: 262 TDPSIRDCIAKVLKPSPELAEFIRVECSK-ENWEGIITRIWPNTKYLDVIVTGAMSQYIP 320

Query: 312 KLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQ 371
            L +Y+G LPL    Y SSE + G N+NP   P   ++ ++PN+ YFEF+P    +    
Sbjct: 321 TLDYYSGGLPLACTMYASSECYFGLNLNPMCKPSEVSYTIMPNMAYFEFLPHE-PSCSGL 379

Query: 372 VLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
                PK V L +V VG+EYEI++T  A
Sbjct: 380 TRDSPPKLVDLVDVVVGKEYEIVITTYA 407


>gi|430800811|pdb|4B2G|A Chain A, Crystal Structure Of An Indole-3-acetic Acid Amido
           Synthase From Vitis Vinifera Involved In Auxin
           Homeostasis
 gi|430800812|pdb|4B2G|B Chain B, Crystal Structure Of An Indole-3-acetic Acid Amido
           Synthase From Vitis Vinifera Involved In Auxin
           Homeostasis
          Length = 609

 Score =  284 bits (726), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 149/384 (38%), Positives = 224/384 (58%), Gaps = 3/384 (0%)

Query: 17  FETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQ 76
            E +T++A+ +Q   L +IL  N   EYL+   L G T  E+FKS +P++ +EDLQP IQ
Sbjct: 26  IEEMTRNADSVQERVLAEILSRNGETEYLKRFKLEGSTVRETFKSKIPVIKYEDLQPEIQ 85

Query: 77  RIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP- 135
           RI +GD S IL+  PI+    SSGT+ G+ K +P   E ++    ++       N   P 
Sbjct: 86  RIANGDRSAILSAHPISEFLTSSGTSAGERKLMPTIQEELDRRQMLYSLLMPVMNLYVPG 145

Query: 136 IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDF 195
           + KGK L F++   +++T GGL A    T+ Y+S  FK       +   SP+E I   D 
Sbjct: 146 LDKGKGLYFLFVKSETRTPGGLLARPVLTSYYKSEHFKTRPYDPYNVYTSPNEAILCADS 205

Query: 196 HQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPS 255
            QS+Y  +LCG+  R+++  + + FA  L+ A R  +L W +L  DIR G LS +IT PS
Sbjct: 206 FQSMYTQMLCGIYERKQVLRLGAVFASGLLRAIRFLQLNWHQLTHDIRTGTLSPKITDPS 265

Query: 256 IRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRH 315
           +R  ++ +LKP+PELADL+  +CS   NW G+I  ++PN KYL  I+TG+M  Y+  L +
Sbjct: 266 VRNCVAGVLKPDPELADLVAGECSK-DNWEGIITRIWPNTKYLDVIVTGAMAQYIPTLDY 324

Query: 316 YAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCI 375
           Y+G LPL    Y SSE + G N+NP   P   ++ ++PN+ YFEF+P    ++       
Sbjct: 325 YSGGLPLACTMYASSECYFGLNLNPMSKPSEVSYTIMPNMAYFEFLPHEHSSIPLSRDS- 383

Query: 376 EPKPVGLTEVKVGEEYEIIVTNVA 399
            P+ V L  V+VG+EYE+++T  A
Sbjct: 384 PPRLVDLAHVEVGKEYELVITTYA 407


>gi|225429317|ref|XP_002271252.1| PREDICTED: probable indole-3-acetic acid-amido synthetase GH3.1
           [Vitis vinifera]
          Length = 598

 Score =  284 bits (726), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 149/384 (38%), Positives = 224/384 (58%), Gaps = 3/384 (0%)

Query: 17  FETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQ 76
            E +T++A+ +Q   L +IL  N   EYL+   L G T  E+FKS +P++ +EDLQP IQ
Sbjct: 26  IEEMTRNADSVQERVLAEILSRNGETEYLKRFKLEGSTVRETFKSKIPVIKYEDLQPEIQ 85

Query: 77  RIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP- 135
           RI +GD S IL+  PI+    SSGT+ G+ K +P   E ++    ++       N   P 
Sbjct: 86  RIANGDRSAILSAHPISEFLTSSGTSAGERKLMPTIQEELDRRQMLYSLLMPVMNLYVPG 145

Query: 136 IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDF 195
           + KGK L F++   +++T GGL A    T+ Y+S  FK       +   SP+E I   D 
Sbjct: 146 LDKGKGLYFLFVKSETRTPGGLLARPVLTSYYKSEHFKTRPYDPYNVYTSPNEAILCADS 205

Query: 196 HQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPS 255
            QS+Y  +LCG+  R+++  + + FA  L+ A R  +L W +L  DIR G LS +IT PS
Sbjct: 206 FQSMYTQMLCGIYERKQVLRLGAVFASGLLRAIRFLQLNWHQLTHDIRTGTLSPKITDPS 265

Query: 256 IRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRH 315
           +R  ++ +LKP+PELADL+  +CS   NW G+I  ++PN KYL  I+TG+M  Y+  L +
Sbjct: 266 VRNCVAGVLKPDPELADLVAGECSK-DNWEGIITRIWPNTKYLDVIVTGAMAQYIPTLDY 324

Query: 316 YAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCI 375
           Y+G LPL    Y SSE + G N+NP   P   ++ ++PN+ YFEF+P    ++       
Sbjct: 325 YSGGLPLACTMYASSECYFGLNLNPMSKPSEVSYTIMPNMAYFEFLPHEHSSIPLSRDS- 383

Query: 376 EPKPVGLTEVKVGEEYEIIVTNVA 399
            P+ V L  V+VG+EYE+++T  A
Sbjct: 384 PPRLVDLAHVEVGKEYELVITTYA 407


>gi|225461203|ref|XP_002283236.1| PREDICTED: indole-3-acetic acid-amido synthetase GH3.6 isoform 2
           [Vitis vinifera]
          Length = 596

 Score =  283 bits (725), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 151/397 (38%), Positives = 228/397 (57%), Gaps = 21/397 (5%)

Query: 17  FETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQ 76
            E +T +A+++Q+  L +IL  NA  EYL   GL G TD ++FK  +P++T+EDLQP I 
Sbjct: 12  IEDVTTNADQVQKRVLAEILTRNAHVEYLHRHGLGGHTDRDTFKKLMPVITYEDLQPDIT 71

Query: 77  RIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP- 135
           RI +GD S IL   PI+    SSGT+ G+ K +P  +E +E    ++       ++    
Sbjct: 72  RIANGDTSLILCSNPISEFLTSSGTSGGERKLMPTIEEELERRSLLYSLLMPVMSQSVQG 131

Query: 136 IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDF 195
           + KGK + F++   ++KT GGL A    T+ Y+SS F+       +   SP+E I  PD 
Sbjct: 132 LEKGKGMYFLFIKSEAKTPGGLVARPVLTSYYKSSHFRERPYDPYTNYTSPNETILCPDS 191

Query: 196 HQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPS 255
           +QS+Y  +LCGL+  +E+  V + FA   + A R  E  W  LC DIR G +  +IT PS
Sbjct: 192 YQSMYSQMLCGLVQNKEVLRVGAVFASGFIRAIRFLEKHWTLLCRDIRTGTIDQQITDPS 251

Query: 256 IRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRH 315
           +R A+ ++LKP+P+LAD +  +C   S W G+I  L+PN KY+  I+TG+M  Y+  L +
Sbjct: 252 VREAVMRVLKPDPKLADFVEGECRKES-WQGIITRLWPNTKYVDVIVTGTMSQYIPTLDY 310

Query: 316 YAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEF-------------IP 362
           Y+ DLPL+   Y SSE + G N+NP   P   ++ ++P + YFEF             +P
Sbjct: 311 YSNDLPLVCTMYASSECYFGVNLNPLCKPSEVSYTLIPTMAYFEFLPVHRNNGTNSISVP 370

Query: 363 QRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
           + L + E Q L      V L +VK+G+EYE++VT  A
Sbjct: 371 KSLNDKEQQDL------VDLVDVKLGQEYELVVTTYA 401


>gi|297796323|ref|XP_002866046.1| hypothetical protein ARALYDRAFT_918581 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297311881|gb|EFH42305.1| hypothetical protein ARALYDRAFT_918581 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 612

 Score =  283 bits (725), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 156/393 (39%), Positives = 228/393 (58%), Gaps = 14/393 (3%)

Query: 18  ETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQR 77
           E +T +A+ +QR  L +IL  NA  EYL+  GL+GRTD E+FK  +P+VT+ED+QP I R
Sbjct: 29  EDVTTNADDVQRRVLEEILSRNADVEYLKRHGLDGRTDRETFKHVMPVVTYEDIQPEINR 88

Query: 78  IIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP-I 136
           I +GD S IL   PI+    SSGT+ G+ K +P  +E ++    ++       N+  P +
Sbjct: 89  IANGDKSQILCSNPISEFLTSSGTSGGERKLMPTIEEELDRRSLLYSLLMPVMNQFVPGL 148

Query: 137 GKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFH 196
            KGK + F++   +SKT GGL A    T+ Y+SS FK       +   SP++ I   D +
Sbjct: 149 DKGKGMYFLFIKSESKTPGGLPARPVLTSYYKSSHFKNRPFDPYNNYTSPNQTILCSDSY 208

Query: 197 QSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPSI 256
           QS+Y  +LCGL   +E+  V + FA   + A +  E  W EL  DIR G LSS IT  S+
Sbjct: 209 QSMYSQMLCGLCQHKEVLRVGAVFASGFIRAIKFLEKHWSELARDIRTGTLSSEITDLSV 268

Query: 257 RAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRHY 316
           R A+ +ILKP+P+LAD +  +C   S W G+I  L+PN KY+  I+TG+M  Y+  L +Y
Sbjct: 269 REAVGEILKPDPKLADFVESECRKTS-WQGIITRLWPNTKYVDVIVTGTMSQYIPTLDYY 327

Query: 317 AGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIP-QRLGNLESQVLCI 375
           +  LPL+   Y SSE + G N+ P   P   ++ ++PN+ YFEF+P  R   + S +   
Sbjct: 328 SNGLPLVCTMYASSECYFGVNLRPLCKPSEVSYTLIPNMAYFEFLPVHRNSGVTSSISL- 386

Query: 376 EPKP---------VGLTEVKVGEEYEIIVTNVA 399
            PK          V L +VK+G+EYE++VT  A
Sbjct: 387 -PKALTEKEQQELVDLVDVKLGQEYELVVTTYA 418


>gi|225461199|ref|XP_002283229.1| PREDICTED: indole-3-acetic acid-amido synthetase GH3.6 isoform 1
           [Vitis vinifera]
 gi|147866579|emb|CAN83696.1| hypothetical protein VITISV_013365 [Vitis vinifera]
          Length = 613

 Score =  283 bits (725), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 151/400 (37%), Positives = 230/400 (57%), Gaps = 21/400 (5%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           ++  E +T +A+++Q+  L +IL  NA  EYL   GL G TD ++FK  +P++T+EDLQP
Sbjct: 26  LQFIEDVTTNADQVQKRVLAEILTRNAHVEYLHRHGLGGHTDRDTFKKLMPVITYEDLQP 85

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNRE 133
            I RI +GD S IL   PI+    SSGT+ G+ K +P  +E +E    ++       ++ 
Sbjct: 86  DITRIANGDTSLILCSNPISEFLTSSGTSGGERKLMPTIEEELERRSLLYSLLMPVMSQS 145

Query: 134 FP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFG 192
              + KGK + F++   ++KT GGL A    T+ Y+SS F+       +   SP+E I  
Sbjct: 146 VQGLEKGKGMYFLFIKSEAKTPGGLVARPVLTSYYKSSHFRERPYDPYTNYTSPNETILC 205

Query: 193 PDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRIT 252
           PD +QS+Y  +LCGL+  +E+  V + FA   + A R  E  W  LC DIR G +  +IT
Sbjct: 206 PDSYQSMYSQMLCGLVQNKEVLRVGAVFASGFIRAIRFLEKHWTLLCRDIRTGTIDQQIT 265

Query: 253 VPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKK 312
            PS+R A+ ++LKP+P+LAD +  +C   S W G+I  L+PN KY+  I+TG+M  Y+  
Sbjct: 266 DPSVREAVMRVLKPDPKLADFVEGECRKES-WQGIITRLWPNTKYVDVIVTGTMSQYIPT 324

Query: 313 LRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEF------------ 360
           L +Y+ DLPL+   Y SSE + G N+NP   P   ++ ++P + YFEF            
Sbjct: 325 LDYYSNDLPLVCTMYASSECYFGVNLNPLCKPSEVSYTLIPTMAYFEFLPVHRNNGTNSI 384

Query: 361 -IPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
            +P+ L + E Q L      V L +VK+G+EYE++VT  A
Sbjct: 385 SVPKSLNDKEQQDL------VDLVDVKLGQEYELVVTTYA 418


>gi|357136593|ref|XP_003569888.1| PREDICTED: probable indole-3-acetic acid-amido synthetase
           GH3.2-like [Brachypodium distachyon]
          Length = 612

 Score =  283 bits (725), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 153/390 (39%), Positives = 228/390 (58%), Gaps = 6/390 (1%)

Query: 12  ELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDL 71
           ELIEE   +TK  + +Q E L  IL  N  AEYL   G+ GRTD ++FK+ VP+VT+EDL
Sbjct: 39  ELIEE---MTKGFDAVQEEVLAAILARNNGAEYLARHGMEGRTDRDAFKARVPVVTYEDL 95

Query: 72  QPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRN 131
           +P I+RI +GD S I++  PI+    SSGT+ G+ K +P  ++ ++    ++       N
Sbjct: 96  RPEIERIANGDRSNIISSHPISEFLTSSGTSAGERKLMPTIEDELDRRQMLYSLLMPVMN 155

Query: 132 REFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVI 190
              P + KGK L F++   ++KT GGL A    T+ Y+S  FK           SP   I
Sbjct: 156 LYVPGLDKGKGLYFLFIKSETKTPGGLPARPVLTSYYKSDHFKHRPFDPYQVYTSPTAAI 215

Query: 191 FGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSR 250
              D  QS+Y  +LCGL+ R E+  V + FA  L+ A R  +L W++L  DI  G LS++
Sbjct: 216 LCTDSFQSMYAQMLCGLLVRTEVLRVGAVFASGLLRAIRFLQLHWKDLARDIESGTLSAK 275

Query: 251 ITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYL 310
           +  PSIR A++++LKP+PELA  +  +C G  +W G+I  ++PN KYL  I+TG+M  Y+
Sbjct: 276 VVEPSIRDAVAEVLKPDPELAAFVAAEC-GKEDWAGIITRMWPNTKYLDVIVTGAMAQYI 334

Query: 311 KKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQR-LGNLE 369
             LR Y+G LP+    Y SSE + G N+ P   P   ++ ++PN+GYFE +P        
Sbjct: 335 PTLRFYSGGLPMACTMYASSECYFGLNLRPMCDPSEVSYTIMPNMGYFELMPHDPEAPPV 394

Query: 370 SQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
           S+  C  P+ V L + +VG+EYE+++T  A
Sbjct: 395 SKDDCPPPRLVDLADAEVGKEYELVITTYA 424


>gi|378747659|gb|AFC36443.1| GH3-1 [Castanea sativa]
          Length = 603

 Score =  283 bits (724), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 161/384 (41%), Positives = 227/384 (59%), Gaps = 3/384 (0%)

Query: 17  FETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQ 76
            + +T + + +Q   L +IL +NA  EYL+   L+G TD E+FKS +P+V ++DLQPYIQ
Sbjct: 31  IDEMTMNTDAVQERVLEEILSQNAETEYLRRYQLDGATDRETFKSKIPVVNYDDLQPYIQ 90

Query: 77  RIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP- 135
           RI +GD SPIL+  PI+    SSGT+ G+ K +P   E  +   +++       N   P 
Sbjct: 91  RIANGDRSPILSSSPISEFLTSSGTSAGERKLMPTIYEEWDRRSKLYSLLMPVMNLYVPG 150

Query: 136 IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDF 195
           + KGK L F++   ++KT  GL A    T  Y+S  FK           SPDE I   D 
Sbjct: 151 LDKGKGLYFLFVKAETKTPSGLLARPVLTGYYKSDHFKTRPYDPYMVYTSPDEAILCADS 210

Query: 196 HQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPS 255
            QSLY  +LCGL+ REE+  + + FA  L+ A R  +L W+EL  DI  G L+S+IT PS
Sbjct: 211 FQSLYTQMLCGLLMREEVLRLGAVFASGLLRAIRFLQLNWKELAHDISTGTLNSKITDPS 270

Query: 256 IRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRH 315
           +R  MSKI+KPNPELA+ I K+CSG  NW G+I  ++PN KYL  I+TG+M  Y   L +
Sbjct: 271 LRECMSKIVKPNPELAEFITKECSG-ENWEGIITRIWPNTKYLDVIVTGAMAQYRPTLDY 329

Query: 316 YAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCI 375
           Y+  LP     Y SSE + G N+ P   P   ++ ++PN+GYFEF+P    N  +     
Sbjct: 330 YSAGLPQSCTMYASSECYFGLNLKPMCKPSEVSYTIMPNMGYFEFLPHD-PNAPALSRDS 388

Query: 376 EPKPVGLTEVKVGEEYEIIVTNVA 399
            P+ V L +V+VG+EYE+I+T  A
Sbjct: 389 PPRLVDLADVEVGKEYELIITTYA 412


>gi|356563554|ref|XP_003550026.1| PREDICTED: indole-3-acetic acid-amido synthetase GH3.3-like
           [Glycine max]
          Length = 593

 Score =  283 bits (723), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 151/383 (39%), Positives = 227/383 (59%), Gaps = 5/383 (1%)

Query: 18  ETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQR 77
           E +T++ + +Q   L +IL +NA  EYL+   LNG TD ++FKS VP+V+++DL+  IQR
Sbjct: 18  EDMTRNTDSVQERVLAEILSQNAQTEYLKRFELNGATDRDTFKSKVPVVSYDDLKHDIQR 77

Query: 78  IIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP-I 136
           I +GD SPIL   PIT    SSGT+ G+ K +P   +  E    IF       N+    +
Sbjct: 78  IANGDRSPILCAHPITEFLTSSGTSAGERKLMPTISQETERRQLIFSLPMPVMNQYVADL 137

Query: 137 GKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFH 196
            KGKAL F++   ++KT  GL A   + ++Y+S  FK       +   SP+E I   D  
Sbjct: 138 DKGKALLFLFTKAETKTPSGLVARPVSASMYKSEQFKNRPYDPYNVYTSPNEAILCLDSF 197

Query: 197 QSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPSI 256
           QS+Y  +LCGLI R ++  + + FA  L+ A R  +L W EL  DI  G L+ +I+   I
Sbjct: 198 QSMYTQVLCGLIMRHQVLRIGANFASGLLRAIRFLQLNWAELAHDISTGTLNPKISDLPI 257

Query: 257 RAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRHY 316
           +  M++ILKP+PELAD I K+CSG  NW  +IP ++PN K++  I+TG+M  Y+  L +Y
Sbjct: 258 KQRMTQILKPDPELADFIVKECSG-ENWESIIPRIWPNTKFVEVIVTGAMAQYIPTLDYY 316

Query: 317 AGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLC-- 374
           +G LP+ S  YGSSE + G N+NP   P   ++ ++PN+GYFEF+P    + +  +    
Sbjct: 317 SGGLPIASNIYGSSECFFGINLNPFCNPSDVSYTIMPNMGYFEFLPHDHDDDDGALYSGS 376

Query: 375 -IEPKPVGLTEVKVGEEYEIIVT 396
               +   L +V++G+ YEI+VT
Sbjct: 377 DSSSRLTDLADVELGKSYEIVVT 399


>gi|41393668|gb|AAS02074.1| auxin and ethylene responsive GH3-like protein [Capsicum chinense]
          Length = 595

 Score =  283 bits (723), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 151/387 (39%), Positives = 227/387 (58%), Gaps = 6/387 (1%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           ++  E +T++A+ +Q+  L +IL  N+  EYL+   L+G +D E+FKS +P+VT+EDLQP
Sbjct: 23  LQFIEEMTRNADAVQQRVLDEILTRNSQTEYLKRFKLDGVSDRETFKSRIPVVTYEDLQP 82

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNRE 133
            IQRI +GD SPIL+  PI+    SSGT+ G+ K +P   E ++    ++       N  
Sbjct: 83  EIQRIANGDRSPILSAHPISEFLTSSGTSAGERKLMPTIKEELDRRQLLYSLLMPVMNLY 142

Query: 134 FP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFG 192
            P + KGK L F++   ++KT GGL A    T+ Y+S  FK+      +   SP+E I  
Sbjct: 143 VPGLDKGKGLYFLFIKSETKTPGGLLARPVLTSYYKSEHFKSRPHDPYNVYTSPNEAILC 202

Query: 193 PDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRIT 252
            D  QS+Y  +LCGL  RE++  + + FA  LV A R  +L W +L  DIR G L+ +IT
Sbjct: 203 ADSFQSMYTQMLCGLYEREQVLRLGAVFASGLVRAIRFLQLHWPQLAHDIRTGNLNPQIT 262

Query: 253 VPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKK 312
             S+   M KI++PNPELAD +  +C    NW G+I  ++P  KYL  I+TG+M  Y+  
Sbjct: 263 NLSLCERMGKIMRPNPELADFVAGECCK-ENWEGIITRIWPKTKYLDVIVTGAMAQYIPT 321

Query: 313 LRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQV 372
           L +Y+G LP     Y +SE + G N+NP   P   ++ ++PN+GYFEF+P       S  
Sbjct: 322 LDYYSGGLPKACTMYAASECYFGLNLNPMCKPSEVSYTIMPNMGYFEFLPHDSTTTNSSP 381

Query: 373 LCIEPKPVGLTEVKVGEEYEIIVTNVA 399
             +    V L +V+VG+EYE+++T  A
Sbjct: 382 TNL----VDLVDVEVGKEYELVITTYA 404


>gi|356543199|ref|XP_003540050.1| PREDICTED: indole-3-acetic acid-amido synthetase GH3.6-like
           [Glycine max]
          Length = 607

 Score =  283 bits (723), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 152/396 (38%), Positives = 231/396 (58%), Gaps = 11/396 (2%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           +E  E +T +A+++Q+  L +IL  NA+ EYL+   L+G+TD E+FK  +P++T+ED+QP
Sbjct: 18  LEFIEDVTANADQVQKRVLSEILSNNANVEYLKRHDLHGQTDRETFKKLLPVITYEDIQP 77

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNRE 133
            I RI +GD SPIL  KPI+    SSGT+ G+ K +P  +E +     ++       ++ 
Sbjct: 78  DINRIANGDTSPILCSKPISEFLTSSGTSGGERKLMPTIEEELGRRSLLYSLLMPVMSQF 137

Query: 134 FP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFG 192
            P + KGK +  ++   ++KT GG+ A    T+ Y+SS FK       +   SP+E +  
Sbjct: 138 VPGLEKGKGMYLMFIKSEAKTPGGIVARPVLTSYYKSSYFKDRPYDPYTNYTSPNETVLC 197

Query: 193 PDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRIT 252
           PD +QS+Y  LLCGL   +E+  V + FA   + A R  E  W  LC DIR G +++ IT
Sbjct: 198 PDSYQSMYSQLLCGLCQHKEVLRVGAVFASGFIRAIRFLEKHWPLLCHDIRTGTINNTIT 257

Query: 253 VPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKK 312
             S+R A+ KILKP+P L DLI  +C G S+W G+I  L+PN KY+  I+TG+M  Y+  
Sbjct: 258 DLSVRDAVMKILKPDPRLGDLIQSEC-GKSSWQGIITRLWPNTKYVDVIVTGTMSQYIPT 316

Query: 313 LRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQV 372
           L +Y+  LPL+   Y SSE + G N+NP   P   ++ ++P + Y+EF+P    N  S  
Sbjct: 317 LDYYSNGLPLVCTMYASSECYFGVNLNPLCKPSEVSYTLIPTMCYYEFLPVNRSNGVSHD 376

Query: 373 LCIEPKP---------VGLTEVKVGEEYEIIVTNVA 399
               P+          V L +VK+G+EYE++VT  A
Sbjct: 377 SLHTPRSLNEKEQQELVELVDVKLGQEYELVVTTYA 412


>gi|4887010|gb|AAD32141.1|AF123503_1 Nt-gh3 deduced protein [Nicotiana tabacum]
          Length = 595

 Score =  282 bits (722), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 149/384 (38%), Positives = 223/384 (58%), Gaps = 6/384 (1%)

Query: 17  FETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQ 76
            E +T++A+ +Q   L +IL  N+  EYL+   L+G +D E+FK+ +P+VT+EDLQP IQ
Sbjct: 26  IEEMTRNADAVQERVLNEILTRNSQTEYLKRFKLDGVSDRETFKNKIPVVTYEDLQPEIQ 85

Query: 77  RIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP- 135
           RI +GD SPIL+  PI+    SSGT+ G+ K +P   E ++    ++       N   P 
Sbjct: 86  RIANGDRSPILSAHPISEFLTSSGTSAGERKLMPTIKEELDRRQLLYSLLMPVMNLYVPG 145

Query: 136 IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDF 195
           + KGK L F++   ++KT GGL A    T+ Y+S  FK       +   SP+E I   D 
Sbjct: 146 LDKGKGLYFLFIKSETKTPGGLLARPVLTSYYKSEHFKRRPHDPYNVYTSPNEAILCADS 205

Query: 196 HQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPS 255
            QS+Y  +LCGL  RE++  + + FA  LV A R  +L W +L  DIR G L+  IT PS
Sbjct: 206 FQSMYTQMLCGLYEREQVLRLGAVFASGLVRAIRFLQLHWPQLAHDIRTGTLNPEITDPS 265

Query: 256 IRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRH 315
           I   M  +++PNP+LAD +  +CS   NW G+I  ++P  KYL  I+TG+M  Y+  L +
Sbjct: 266 ICERMGLVMRPNPKLADFVTDECSK-ENWEGIITRIWPKTKYLDVIVTGAMAQYIPTLDY 324

Query: 316 YAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCI 375
           Y+G LP     Y +SE + G N+NP   P   ++ ++PN+GYFEF+P    +       +
Sbjct: 325 YSGGLPKACTMYAASECYFGLNLNPMCKPSEVSYTIMPNMGYFEFLPHDPNSSRDSTRNL 384

Query: 376 EPKPVGLTEVKVGEEYEIIVTNVA 399
               V L +V+VG+EYE+++T  A
Sbjct: 385 ----VDLVDVEVGKEYELVITTYA 404


>gi|224124160|ref|XP_002319260.1| GH3 family protein [Populus trichocarpa]
 gi|222857636|gb|EEE95183.1| GH3 family protein [Populus trichocarpa]
          Length = 611

 Score =  282 bits (721), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 153/393 (38%), Positives = 229/393 (58%), Gaps = 12/393 (3%)

Query: 17  FETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQ 76
            E +T +A+ +Q++ L +IL  NA  EYLQ  GLNG+T+ E+FK  VP++T+ED+QP I 
Sbjct: 27  IEDVTSNADEVQKKVLEEILSRNAHVEYLQRHGLNGQTNRETFKKAVPVITYEDIQPDIN 86

Query: 77  RIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP- 135
           RI +GD S IL  KPI+    SSGT+ G+ K +P  +E +     ++        +  P 
Sbjct: 87  RIANGDTSQILCSKPISEFLTSSGTSGGERKLMPTIEEELGRRSLLYSLLMPVMTQFVPG 146

Query: 136 IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDF 195
           + KGK + F++   ++KT GGL A    T+ Y+S+ FK       +   SP+E I  PD 
Sbjct: 147 LEKGKGMYFLFIKSEAKTPGGLVARPVLTSYYKSTHFKDRPYDPYTNYTSPNETILCPDS 206

Query: 196 HQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPS 255
           +QS+Y  +LCGL   +E+  V + FA   + A R  E  W+ L +DIR G++  +IT PS
Sbjct: 207 YQSMYSQMLCGLCQHKEVLRVGAVFASGFIRAIRFLEKHWKLLANDIRTGIIDPQITDPS 266

Query: 256 IRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRH 315
           +R A+ KILK +P+LAD I  +CS  S W G+I  L+PN KY+  I+TG+M  Y+  L +
Sbjct: 267 VREAVMKILKSDPKLADFIEAECSKES-WQGIITRLWPNTKYVDVIVTGTMSQYIPTLDY 325

Query: 316 YAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCI 375
           Y+  LPL+   Y SSE + G N+NP   P   ++ ++P + YFEF+P    N     + +
Sbjct: 326 YSNGLPLVCTMYASSECYFGVNLNPICKPSEVSYTLIPTMAYFEFLPVHRNNGVINSVSM 385

Query: 376 EPKP---------VGLTEVKVGEEYEIIVTNVA 399
            PK          V L +VK+ +EYE++VT  A
Sbjct: 386 -PKSLNEKEQQELVDLVDVKLDQEYELVVTTYA 417


>gi|297852488|ref|XP_002894125.1| auxin-responsive GH3 family protein [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339967|gb|EFH70384.1| auxin-responsive GH3 family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 576

 Score =  282 bits (721), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 153/392 (39%), Positives = 237/392 (60%), Gaps = 21/392 (5%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           +++ E +T +A++IQ + L++IL  NA+ EY+Q   L+G +D E FK  +P+V++ D++P
Sbjct: 7   LKDLEVLTTNAKQIQDDVLKEILTLNANTEYVQRF-LHGSSDKELFKKNIPVVSYGDVKP 65

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNRE 133
           YI+R+ +G+ S +++G+PIT   +SSGT+ G  K  P ND+ +E    +   S    ++ 
Sbjct: 66  YIERVANGEPSDVISGEPITRFVQSSGTSGGIHKIFPVNDKYIEKLGYLVDVSSFITSKH 125

Query: 134 FPIG---KGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVI 190
           F      KGK + F+Y   +SKT  GL   ++ T+ + S  FK       S+  SPD+VI
Sbjct: 126 FNDNVAEKGKKMAFLYNRLESKTPSGLPVSSSFTSYFMSDYFKNRPSKCNSEYTSPDQVI 185

Query: 191 FGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSR 250
           F PD +QS+YCHLLCGL  RE++  V +TFAH+LV A    ++ W+EL  +IR G +S  
Sbjct: 186 FCPDNNQSMYCHLLCGLSQREKVVGVSATFAHALVKALNALQIYWKELSSNIRSGHVSEW 245

Query: 251 ITVPSIRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHY 309
           IT  + R ++S  L  P+ ELAD+I ++CS  ++W G+I  L+P AK++  I+TG M  Y
Sbjct: 246 ITDTNCRNSVSATLGGPDLELADMIERECSN-NSWEGIITRLWPKAKFIECIVTGQMAQY 304

Query: 310 LKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIP----QRL 365
           +  L  Y+  LP++S  YGSSE   G NV+P   P+  ++  LPNI YFEF+P    + +
Sbjct: 305 IPTLEFYSNKLPIVSMIYGSSESIFGVNVDPLSKPQDVSYTFLPNISYFEFLPVDHEEDM 364

Query: 366 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN 397
            N+           V L  VK+G  YE +VT+
Sbjct: 365 NNI-----------VDLVNVKLGCYYETVVTS 385


>gi|356549801|ref|XP_003543279.1| PREDICTED: indole-3-acetic acid-amido synthetase GH3.6-like
           [Glycine max]
          Length = 611

 Score =  281 bits (718), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 150/401 (37%), Positives = 237/401 (59%), Gaps = 17/401 (4%)

Query: 12  ELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRT-DPESFKSCVPLVTHED 70
           ++++  E +T +A+ +Q++ L +IL  NA+ EYL+  G+NG+T DP++FK  +P++T+ED
Sbjct: 20  KILDFIEDVTNNADEVQKKVLSEILSRNANVEYLRRHGVNGQTVDPDTFKRLLPVITYED 79

Query: 71  LQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFR 130
           +QP I RI +GD SPILT KP+T    SSGT+ G+ K +P  +E +     ++       
Sbjct: 80  IQPDINRIANGDKSPILTSKPVTEFLTSSGTSGGERKLMPTIEEELGRRCMLYSLLMPIM 139

Query: 131 NREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEV 189
           N+  P + KGK +  ++   +SKT GG+ A    T+ Y+S  F+       +   SP+E 
Sbjct: 140 NQFVPDLEKGKGMYLMFIKCESKTPGGIVARPVLTSYYKSPYFRDRSYDPYTNYTSPNET 199

Query: 190 IFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSS 249
           +   D +QS+Y  LLCGL   +E+  V + FA   + A R  E  W  LC+DI+ G +++
Sbjct: 200 VLCLDSYQSMYSQLLCGLCQHKEVLRVGAIFASGFIRAIRFLEKHWALLCNDIKTGTINN 259

Query: 250 RITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHY 309
            IT  S+R A+ +ILK +P+LAD IH +CS  S W G+I  L+PN KY+  I+TG+M  Y
Sbjct: 260 SITDSSVREAVMRILKADPKLADFIHNECSKGS-WQGIITRLWPNTKYVDVIVTGTMAQY 318

Query: 310 LKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLE 369
           +  L +Y+  LPL+   Y SSE + G N+NP   P   ++ ++P + Y+EF+P    N  
Sbjct: 319 IPTLDYYSNGLPLVCTMYASSECYFGVNLNPLCKPSHVSYTLIPTMCYYEFLPV---NRS 375

Query: 370 SQVLCIEPKP-----------VGLTEVKVGEEYEIIVTNVA 399
           +++    P P           V L +VK+G+EYE++VT  A
Sbjct: 376 NELAASRPSPTSLNQAQQQELVELVDVKLGQEYELVVTTHA 416


>gi|15239653|ref|NP_200262.1| indole-3-acetic acid-amido synthetase GH3.6 [Arabidopsis thaliana]
 gi|62900334|sp|Q9LSQ4.1|GH36_ARATH RecName: Full=Indole-3-acetic acid-amido synthetase GH3.6; AltName:
           Full=Auxin-responsive GH3-like protein 6; Short=AtGH3-6;
           AltName: Full=Protein DWARF IN LIGHT 1; Short=DFL-1
 gi|8885594|dbj|BAA97524.1| auxin-responsive-like protein [Arabidopsis thaliana]
 gi|11041726|dbj|BAB17304.1| auxin-responsive GH3 homologue [Arabidopsis thaliana]
 gi|59958336|gb|AAX12878.1| At5g54510 [Arabidopsis thaliana]
 gi|209414530|gb|ACI46505.1| At5g54510 [Arabidopsis thaliana]
 gi|332009121|gb|AED96504.1| indole-3-acetic acid-amido synthetase GH3.6 [Arabidopsis thaliana]
          Length = 612

 Score =  281 bits (718), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 154/394 (39%), Positives = 227/394 (57%), Gaps = 14/394 (3%)

Query: 17  FETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQ 76
            E +T +A+ +QR  L +IL  NA  EYL+  GL GRTD E+FK  +P+VT+ED+QP I 
Sbjct: 28  IEDVTTNADDVQRRVLEEILSRNADVEYLKRHGLEGRTDRETFKHIMPVVTYEDIQPEIN 87

Query: 77  RIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP- 135
           RI +GD S +L   PI+    SSGT+ G+ K +P  +E ++    ++       ++  P 
Sbjct: 88  RIANGDKSQVLCSNPISEFLTSSGTSGGERKLMPTIEEELDRRSLLYSLLMPVMDQFVPG 147

Query: 136 IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDF 195
           + KGK + F++   +SKT GGL A    T+ Y+SS FK       +   SP++ I   D 
Sbjct: 148 LDKGKGMYFLFIKSESKTPGGLPARPVLTSYYKSSHFKNRPYDPYTNYTSPNQTILCSDS 207

Query: 196 HQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPS 255
           +QS+Y  +LCGL   +E+  V + FA   + A +  E  W EL  DIR G LSS IT  S
Sbjct: 208 YQSMYSQMLCGLCQHKEVLRVGAVFASGFIRAIKFLEKHWPELARDIRTGTLSSEITDSS 267

Query: 256 IRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRH 315
           +R A+ +ILKP+P+LAD +  +C   S W G+I  L+PN KY+  I+TG+M  Y+  L +
Sbjct: 268 VREAVGEILKPDPKLADFVESECRKTS-WQGIITRLWPNTKYVDVIVTGTMSQYIPTLDY 326

Query: 316 YAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIP-QRLGNLESQVLC 374
           Y+  LPL+   Y SSE + G N+ P   P   ++ ++PN+ YFEF+P  R   + S +  
Sbjct: 327 YSNGLPLVCTMYASSECYFGVNLRPLCKPSEVSYTLIPNMAYFEFLPVHRNSGVTSSISL 386

Query: 375 IEPKP---------VGLTEVKVGEEYEIIVTNVA 399
             PK          V L +VK+G+EYE++VT  A
Sbjct: 387 --PKALTEKEQQELVDLVDVKLGQEYELVVTTYA 418


>gi|17978966|gb|AAL47444.1| AT5g54510/F24B18_13 [Arabidopsis thaliana]
          Length = 612

 Score =  281 bits (718), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 154/393 (39%), Positives = 227/393 (57%), Gaps = 14/393 (3%)

Query: 18  ETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQR 77
           E +T +A+ +QR  L +IL  NA  EYL+  GL GRTD E+FK  +P+VT+ED+QP I R
Sbjct: 29  EDVTTNADDVQRRVLEEILSRNADVEYLKRHGLEGRTDRETFKHIMPVVTYEDIQPEINR 88

Query: 78  IIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP-I 136
           I +GD S +L   PI+    SSGT+ G+ K +P  +E ++    ++       ++  P +
Sbjct: 89  IANGDKSQVLCSNPISEFLTSSGTSGGERKLMPTIEEELDRRSLLYSLLMPVMDQFVPGL 148

Query: 137 GKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFH 196
            KGK + F++   +SKT GGL A    T+ Y+SS FK       +   SP++ I   D +
Sbjct: 149 DKGKGMYFLFIKSESKTPGGLPARPVLTSYYKSSHFKNRPYDPYTNYTSPNQTILCSDSY 208

Query: 197 QSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPSI 256
           QS+Y  +LCGL   +E+  V + FA   + A +  E  W EL  DIR G LSS IT  S+
Sbjct: 209 QSMYSQMLCGLCQHKEVLRVGAVFASGFIRAIKFLEKHWPELARDIRTGTLSSEITDSSV 268

Query: 257 RAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRHY 316
           R A+ +ILKP+P+LAD +  +C   S W G+I  L+PN KY+  I+TG+M  Y+  L +Y
Sbjct: 269 REAVGEILKPDPKLADFVESECRKTS-WQGIITRLWPNTKYVDVIVTGTMSQYIPTLDYY 327

Query: 317 AGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIP-QRLGNLESQVLCI 375
           +  LPL+   Y SSE + G N+ P   P   ++ ++PN+ YFEF+P  R   + S +   
Sbjct: 328 SNGLPLVCTMYASSECYFGVNLRPLCKPSEVSYTLIPNMAYFEFLPVHRNSGVTSSISL- 386

Query: 376 EPKP---------VGLTEVKVGEEYEIIVTNVA 399
            PK          V L +VK+G+EYE++VT  A
Sbjct: 387 -PKALTEKEQQELVDLVDVKLGQEYELVVTTYA 418


>gi|356514929|ref|XP_003526154.1| PREDICTED: indole-3-acetic acid-amido synthetase GH3.6-like
           [Glycine max]
          Length = 609

 Score =  281 bits (718), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 153/396 (38%), Positives = 231/396 (58%), Gaps = 11/396 (2%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           +E  E +T +A+++Q+  L +IL  NA+AEYL+  GL+G+TD E+FK  +P++T+ED+QP
Sbjct: 18  LEFIEDVTANADQVQKRVLSEILSNNANAEYLKRHGLHGQTDRETFKKLLPVITYEDIQP 77

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNRE 133
            I RI +GD SPIL  KPI+    SSGT+ G+ K +P  +E +     ++       ++ 
Sbjct: 78  DINRIANGDTSPILCSKPISEFLTSSGTSGGERKLMPTIEEELGRRSLLYSLLMPVMSQF 137

Query: 134 FP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFG 192
            P + KGK +  ++   ++KT GG+ A    T+ Y+SS FK       +   SP+E +  
Sbjct: 138 VPGLEKGKGMYLMFIKSEAKTPGGIVARPVLTSYYKSSYFKDRPYDPYTNYTSPNETVLC 197

Query: 193 PDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRIT 252
            D +QS+Y  LLCGL   +E+  V + FA   + A R  E  W  LC DIR G + + +T
Sbjct: 198 LDSYQSMYSQLLCGLCQHKEVLRVGAVFASGFIRAIRFLEKHWPLLCHDIRTGTIDNTVT 257

Query: 253 VPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKK 312
             S+R A+ KILKP+  LADLI  +C G S+W G+I  L+PN KY+  I+TG+M  Y+  
Sbjct: 258 DLSVRDAVMKILKPDARLADLIQCEC-GKSSWQGIITRLWPNTKYVDVIVTGTMSQYIPT 316

Query: 313 LRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQV 372
           L +Y+  LPL+   Y SSE + G N+NP   P   ++ ++P + YFEF+P    N  S  
Sbjct: 317 LDYYSNGLPLVCTMYASSECYFGVNLNPLCKPSEVSYTLIPTMCYFEFLPVNRSNGVSHD 376

Query: 373 LCIEPKP---------VGLTEVKVGEEYEIIVTNVA 399
               P+          V L +VK+G+EYE++VT  A
Sbjct: 377 NLHTPRSLNEKEQKELVELVDVKLGQEYELVVTTYA 412


>gi|378405225|sp|Q9SZT9.3|GH32_ARATH RecName: Full=Indole-3-acetic acid-amido synthetase GH3.2; AltName:
           Full=Auxin-responsive GH3-like protein 2; Short=AtGH3-2;
           AltName: Full=Protein YADOKARI 1
          Length = 549

 Score =  280 bits (716), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 153/386 (39%), Positives = 227/386 (58%), Gaps = 4/386 (1%)

Query: 17  FETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQ 76
            E +T++ + +Q + L +IL  N++ EYL+   L+G  D ++FKS VP+VT+EDL+P IQ
Sbjct: 27  IEEMTRNPDSVQEKVLGEILTRNSNTEYLKRFDLDGVVDRKTFKSKVPVVTYEDLKPEIQ 86

Query: 77  RIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP- 135
           RI +GD SPIL+  PIT    SSGT+ G+ K +P  +E ++    ++       N   P 
Sbjct: 87  RISNGDCSPILSSHPITEFLTSSGTSAGERKLMPTIEEDLDRRQLLYSLLMPVMNLYVPG 146

Query: 136 IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDF 195
           + KGK L F++   +SKT GGL A    T+ Y+S  FK       +   SP+E I   D 
Sbjct: 147 LDKGKGLYFLFVKSESKTSGGLPARPVLTSYYKSDHFKRRPYDPYNVYTSPNEAILCSDS 206

Query: 196 HQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPS 255
            QS+Y  +LCGL+ R E+  + + FA  L+ A    +  W+EL  DI  G LSSRI  P+
Sbjct: 207 SQSMYAQMLCGLLMRHEVLRLGAVFASGLLRAISFLQNNWKELARDISTGTLSSRIFDPA 266

Query: 256 IRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLR 314
           I+  MSKIL KP+ ELA+ +   CS   NW G+I +++PN KYL  I+TG+M  Y+  L 
Sbjct: 267 IKNRMSKILTKPDQELAEFLVGVCSQ-ENWEGIITKIWPNTKYLDVIVTGAMAQYIPTLE 325

Query: 315 HYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRL-GNLESQVL 373
           +Y+G LP+    Y SSE + G N+ P   P   ++ ++PN+ YFEF+P    G+  ++  
Sbjct: 326 YYSGGLPMACTMYASSESYFGINLKPMCKPSEVSYTIMPNMAYFEFLPHNHDGDGAAEAS 385

Query: 374 CIEPKPVGLTEVKVGEEYEIIVTNVA 399
             E   V L  V+VG+EYE+++T  A
Sbjct: 386 LDETSLVELANVEVGKEYELVITTYA 411


>gi|224115146|ref|XP_002316954.1| GH3 family protein [Populus trichocarpa]
 gi|222860019|gb|EEE97566.1| GH3 family protein [Populus trichocarpa]
          Length = 611

 Score =  280 bits (716), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 154/397 (38%), Positives = 228/397 (57%), Gaps = 22/397 (5%)

Query: 18  ETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQR 77
           E +T +A+  Q++ L +IL  NA  EYLQ  GLNG+T+ E+FK  +P++ +ED+QP I R
Sbjct: 28  EDVTSNADEAQKKVLEEILSRNAHVEYLQRHGLNGQTNRETFKKVMPVINYEDIQPDINR 87

Query: 78  IIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP-I 136
           I +GD SPIL  KPI+    SSGT+ G+ K +P   E +     ++       ++  P +
Sbjct: 88  IANGDASPILCSKPISEFLTSSGTSGGERKLMPTIVEELGRRSLLYSLLMPVMSQFVPDL 147

Query: 137 GKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFH 196
            KGK + F++   ++KT GGL A    T+ Y+S+ FK       +   SP+E I  PD +
Sbjct: 148 EKGKGMYFLFIKSEAKTPGGLVARPVLTSYYKSTHFKDRPYDPYTNYTSPNETILCPDSY 207

Query: 197 QSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPSI 256
           QS+Y  +LCGL   +E+  V + FA   + A R  E  W+ L +DIR G++  +IT PSI
Sbjct: 208 QSMYSQMLCGLCQHKEVLRVGAVFASGFIRAIRFLEKYWKFLANDIRTGIIDPQITDPSI 267

Query: 257 RAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRHY 316
           R A+ KILKP+ +LAD I  +CS  S W G+I  L+PN KY+  I+TG+M  Y+  L +Y
Sbjct: 268 REAVMKILKPDAKLADFIEAECSKES-WQGIITRLWPNTKYVDVIVTGTMSQYIPTLDYY 326

Query: 317 AGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFI--------------P 362
           +  LPL+   Y SSE + G N+NP   P   ++ ++P + YFEF+              P
Sbjct: 327 SNGLPLVCTMYASSECYFGVNLNPICKPSEVSYTLIPTMAYFEFLPVNRNNGGINSVSRP 386

Query: 363 QRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
           + L   E Q L      V L +VK+ +EYE++VT  A
Sbjct: 387 KSLKEKEQQEL------VDLVDVKLDQEYELVVTTYA 417


>gi|226509966|ref|NP_001151752.1| indole-3-acetic acid-amido synthetase GH3.8 [Zea mays]
 gi|195649515|gb|ACG44225.1| indole-3-acetic acid-amido synthetase GH3.8 [Zea mays]
          Length = 614

 Score =  280 bits (715), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 152/391 (38%), Positives = 227/391 (58%), Gaps = 8/391 (2%)

Query: 12  ELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRT-DPESFKSCVPLVTHED 70
           E ++  E +T + + +Q   L +IL  NA  EYL   GL   T D  +F++ VP+ T+ED
Sbjct: 33  EXLQFIEEMTSNVDAVQERVLGEILARNAGTEYLAKYGLAAATTDRATFRAKVPMATYED 92

Query: 71  LQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLP-FNDELMETTLQIFRTSYAF 129
           LQPYI+RI DGD SPIL+G P++    SSGT+ G+ K +P   DEL    L ++      
Sbjct: 93  LQPYIRRIADGDRSPILSGHPVSEFLTSSGTSAGERKLMPTIEDELNRRQL-LYSLQMPV 151

Query: 130 RNREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDE 188
            N   P + KGKAL F++   ++KT GGL A    T+ Y+S+ FK       +   SP  
Sbjct: 152 MNLYVPGMDKGKALHFLFVKSETKTPGGLAARPVLTSYYKSNHFKNRPFDAYNNYTSPTA 211

Query: 189 VIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLS 248
            I   D  QS+Y  +LCGL  R+++  V + FA  L+ A R  +L WE+L +DI  G L+
Sbjct: 212 AILCADAFQSMYAQMLCGLCQRQDVLRVGAVFASGLLRAIRFLQLNWEQLAEDIEAGSLT 271

Query: 249 SRITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEH 308
            R+T PS+R A++ IL+ +PELA L+  +CS   +W G+I  ++P+ KYL  I+TG+M  
Sbjct: 272 PRVTDPSVREAVAGILRADPELAALVRSECSK-GDWAGIITRIWPSTKYLDVIVTGAMAQ 330

Query: 309 YLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNL 368
           Y+  L++Y+G LP+    Y SSE + G N+ P   P   ++ ++PN+ YFEF+P    + 
Sbjct: 331 YIPTLKYYSGGLPMACTMYASSECYFGLNLRPMCDPSEVSYTLMPNMCYFEFLPM---DS 387

Query: 369 ESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
            +       K V L  V+VG EYE+++T  A
Sbjct: 388 AAASGGDASKLVDLARVEVGREYELVITTYA 418


>gi|16648769|gb|AAL25575.1| AT4g37390/F6G17_40 [Arabidopsis thaliana]
          Length = 549

 Score =  280 bits (715), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 153/386 (39%), Positives = 227/386 (58%), Gaps = 4/386 (1%)

Query: 17  FETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQ 76
            E +T++ + +Q + L +IL  N++ EYL+   L+G  D ++FKS VP+VT+EDL+P IQ
Sbjct: 27  IEEMTRNPDSVQEKVLGEILTRNSNTEYLKRFDLDGVVDRKTFKSKVPVVTYEDLKPEIQ 86

Query: 77  RIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP- 135
           RI +GD SPIL+  PIT    SSGT+ G+ K +P  +E ++    ++       N   P 
Sbjct: 87  RISNGDCSPILSSHPITEFLTSSGTSAGERKLMPTIEEDLDRRQLLYSLLMPVMNLYVPG 146

Query: 136 IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDF 195
           + KGK L F++   +SKT GGL A    T+ Y+S  FK       +   SP+E I   D 
Sbjct: 147 LDKGKGLYFLFVKSESKTSGGLPARPVLTSYYKSDHFKRRPYDPYNVYTSPNEAILCSDS 206

Query: 196 HQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPS 255
            QS+Y  +LCGL+ R E+  + + FA  L+ A    +  W+EL  DI  G LSSRI  P+
Sbjct: 207 SQSMYAQMLCGLLMRHEVLRLGAVFASGLLRAISFLQNNWKELARDISTGTLSSRIFDPA 266

Query: 256 IRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLR 314
           I+  MSKIL KP+ ELA+ +   CS   NW G+I +++PN KYL  I+TG+M  Y+  L 
Sbjct: 267 IKNRMSKILTKPDQELAEFLVGVCSQ-ENWEGIITKIWPNTKYLDVIVTGAMAQYIPTLE 325

Query: 315 HYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRL-GNLESQVL 373
           +Y+G LP+    Y SSE + G N+ P   P   ++ ++PN+ YFEF+P    G+  ++  
Sbjct: 326 YYSGGLPMACTMYASSESYFGINLKPMCKPSEVSYTIMPNMAYFEFLPHNHDGDGAAEAS 385

Query: 374 CIEPKPVGLTEVKVGEEYEIIVTNVA 399
             E   V L  V+VG+EYE+++T  A
Sbjct: 386 LDETSLVELANVEVGKEYELVITTYA 411


>gi|15235538|ref|NP_195455.1| indole-3-acetic acid-amido synthetase GH3.2 [Arabidopsis thaliana]
 gi|4468805|emb|CAB38206.1| auxin-responsive GH3-like protein [Arabidopsis thaliana]
 gi|7270721|emb|CAB80404.1| auxin-responsive GH3-like protein [Arabidopsis thaliana]
 gi|332661387|gb|AEE86787.1| indole-3-acetic acid-amido synthetase GH3.2 [Arabidopsis thaliana]
          Length = 603

 Score =  280 bits (715), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 153/386 (39%), Positives = 227/386 (58%), Gaps = 4/386 (1%)

Query: 17  FETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQ 76
            E +T++ + +Q + L +IL  N++ EYL+   L+G  D ++FKS VP+VT+EDL+P IQ
Sbjct: 27  IEEMTRNPDSVQEKVLGEILTRNSNTEYLKRFDLDGVVDRKTFKSKVPVVTYEDLKPEIQ 86

Query: 77  RIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP- 135
           RI +GD SPIL+  PIT    SSGT+ G+ K +P  +E ++    ++       N   P 
Sbjct: 87  RISNGDCSPILSSHPITEFLTSSGTSAGERKLMPTIEEDLDRRQLLYSLLMPVMNLYVPG 146

Query: 136 IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDF 195
           + KGK L F++   +SKT GGL A    T+ Y+S  FK       +   SP+E I   D 
Sbjct: 147 LDKGKGLYFLFVKSESKTSGGLPARPVLTSYYKSDHFKRRPYDPYNVYTSPNEAILCSDS 206

Query: 196 HQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPS 255
            QS+Y  +LCGL+ R E+  + + FA  L+ A    +  W+EL  DI  G LSSRI  P+
Sbjct: 207 SQSMYAQMLCGLLMRHEVLRLGAVFASGLLRAISFLQNNWKELARDISTGTLSSRIFDPA 266

Query: 256 IRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLR 314
           I+  MSKIL KP+ ELA+ +   CS   NW G+I +++PN KYL  I+TG+M  Y+  L 
Sbjct: 267 IKNRMSKILTKPDQELAEFLVGVCSQ-ENWEGIITKIWPNTKYLDVIVTGAMAQYIPTLE 325

Query: 315 HYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRL-GNLESQVL 373
           +Y+G LP+    Y SSE + G N+ P   P   ++ ++PN+ YFEF+P    G+  ++  
Sbjct: 326 YYSGGLPMACTMYASSESYFGINLKPMCKPSEVSYTIMPNMAYFEFLPHNHDGDGAAEAS 385

Query: 374 CIEPKPVGLTEVKVGEEYEIIVTNVA 399
             E   V L  V+VG+EYE+++T  A
Sbjct: 386 LDETSLVELANVEVGKEYELVITTYA 411


>gi|342316045|gb|AEL22119.1| GH31 [Echinochloa crus-galli]
          Length = 612

 Score =  280 bits (715), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 146/389 (37%), Positives = 219/389 (56%), Gaps = 4/389 (1%)

Query: 12  ELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDL 71
           E +   E +T D + +Q+  L +IL  NA  EYL   GL G TD  +F++ VP+ T+EDL
Sbjct: 28  EKLRFIEEMTSDVDAVQKRVLAEILARNAETEYLARCGLAGATDRAAFRAKVPMATYEDL 87

Query: 72  QPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRN 131
           QP IQRI +GD SPIL+  PI+    SSGT+ G+ K +P   E ++    ++       N
Sbjct: 88  QPDIQRIANGDRSPILSAHPISEFLTSSGTSAGERKLMPTIKEELDRRQLLYSLLMPVMN 147

Query: 132 REFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVI 190
              P + KGKAL F++   ++ T GGL A    T+ Y+S  FK           SP   I
Sbjct: 148 LYVPGLDKGKALYFLFVKSETTTPGGLTARPVLTSYYKSEHFKNRPYDPYHDYTSPTAAI 207

Query: 191 FGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSR 250
              D  QS+Y  + CGL  R ++  V + FA  L+ A R  +L WE+L DDI  G L+ R
Sbjct: 208 LCADAFQSMYAQMACGLCQRHDVLRVGAVFASGLLRAIRFLQLHWEQLADDIERGSLTPR 267

Query: 251 ITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYL 310
           ++ PS+R A++ IL+P+PELA  +  +CS   +W G++  ++PN +YL  I+TG+M+ Y+
Sbjct: 268 VSDPSVRDAVAAILRPDPELARFLRAECS-RGDWAGIVTRVWPNTRYLDVIVTGAMQQYI 326

Query: 311 KKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLES 370
             L +Y+G LP+    Y SSE + G N+ P   P   ++ ++PN+GYFEF+P  +     
Sbjct: 327 PTLEYYSGGLPMACTMYASSECYFGLNLRPMCRPSEVSYTIMPNMGYFEFLP--VDEASG 384

Query: 371 QVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
                  + V L  V+ G EYE+++T  A
Sbjct: 385 VASGDAAQLVDLARVEAGREYELVITTYA 413


>gi|223947041|gb|ACN27604.1| unknown [Zea mays]
 gi|414887410|tpg|DAA63424.1| TPA: indole-3-acetic acid-amido synthetase GH3.8 [Zea mays]
          Length = 614

 Score =  280 bits (715), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 154/395 (38%), Positives = 228/395 (57%), Gaps = 16/395 (4%)

Query: 12  ELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRT-DPESFKSCVPLVTHED 70
           E ++  E +T + + +Q   L +IL  NA  EYL   GL   T D  +F++ VP+ T+ED
Sbjct: 33  EKLQFIEEMTSNVDAVQERVLGEILARNAGTEYLAKYGLAAATTDRATFRAKVPMATYED 92

Query: 71  LQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLP-FNDELMETTLQIFRTSYAF 129
           LQPYI+RI DGD SPIL+G P++    SSGT+ G+ K +P   DEL    L ++      
Sbjct: 93  LQPYIRRIADGDRSPILSGHPVSEFLTSSGTSAGERKLMPTIEDELNRRQL-LYSLQMPV 151

Query: 130 RNREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDE 188
            N   P + KGKAL F++   ++KT GGL A    T+ Y+S+ FK       +   SP  
Sbjct: 152 MNLYVPGMDKGKALHFLFVKSETKTPGGLAARPVLTSYYKSNHFKNRPFDAYNNYTSPTA 211

Query: 189 VIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLS 248
            I   D  QS+Y  +LCGL  R+++  V + FA  L+ A R  +L WE+L +DI  G L+
Sbjct: 212 AILCADAFQSMYAQMLCGLCQRQDVLRVGAVFASGLLRAIRFLQLNWEQLAEDIEAGSLT 271

Query: 249 SRITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEH 308
            R+T PS+R A++ IL+ +PELA L+  +CS   +W G+I  ++P+ KYL  I+TG+M  
Sbjct: 272 PRVTDPSVREAVAGILRADPELAALVRSECSK-GDWAGIITRIWPSTKYLDVIVTGAMAQ 330

Query: 309 YLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQ----R 364
           Y+  L++Y+G LP+    Y SSE + G N+ P   P   ++ ++PN+ YFEF+P      
Sbjct: 331 YIPTLKYYSGGLPMACTMYASSECYFGLNLRPMCDPSEVSYTLMPNMCYFEFLPMDSAAA 390

Query: 365 LGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
            G   SQ+       V L  V+VG EYE+++T  A
Sbjct: 391 SGGDASQL-------VDLARVEVGREYELVITTYA 418


>gi|293335103|ref|NP_001169263.1| uncharacterized protein LOC100383126 [Zea mays]
 gi|223975891|gb|ACN32133.1| unknown [Zea mays]
 gi|414880348|tpg|DAA57479.1| TPA: hypothetical protein ZEAMMB73_098717 [Zea mays]
          Length = 604

 Score =  279 bits (714), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 149/392 (38%), Positives = 230/392 (58%), Gaps = 3/392 (0%)

Query: 9   DVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTH 68
           DV++L E  E  T++ +  Q   L +IL  N  AEYL+  G+ GRTD  +FK+CVP+VT+
Sbjct: 26  DVEKL-EFIEDKTRNFDAEQVRVLAEILARNNGAEYLRRHGMEGRTDRLAFKACVPVVTY 84

Query: 69  EDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYA 128
           EDL+P I+RI +GD S I++  PIT    SSGT+ G+ K +P  ++ +     ++     
Sbjct: 85  EDLRPEIERIANGDRSNIISSHPITEFLTSSGTSAGERKLMPTIEDELNRRQMLYSLLMP 144

Query: 129 FRNREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPD 187
             N   P + KGK L F++   ++KT GGL A    T+ Y+S  FK       +   SP 
Sbjct: 145 VMNLYVPGLDKGKGLYFLFIKSETKTPGGLPARPVLTSYYKSDHFKHRPYDPYNVYTSPT 204

Query: 188 EVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVL 247
             I   D  QS+Y  +LCGL+ R E+  V + FA  L+ A R  +L W+EL  D+R G L
Sbjct: 205 AAILCTDSFQSMYSQMLCGLVARAEVLRVGAVFASGLLRAIRFLQLHWQELAHDLRTGTL 264

Query: 248 SSRITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSME 307
           S+++T PSIR A++++L+P+  LADL+  +C G  +W G+I  ++PN KYL  I+TG+M 
Sbjct: 265 SAKVTEPSIREAVAEVLRPDAGLADLVEAEC-GKESWEGIITRVWPNTKYLDVIVTGAMA 323

Query: 308 HYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGN 367
            Y+  L++Y+G LP+    Y SSE + G N+ P   P   ++ ++PN+GYFE +P     
Sbjct: 324 QYIPTLKYYSGGLPMACTMYASSECYFGLNLRPMCDPSEVSYTIMPNMGYFELLPHDPDA 383

Query: 368 LESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
           +        P+ + L + +VG +YE+++T  A
Sbjct: 384 VPPSRDDPPPRLLDLADAEVGRDYELVITTYA 415


>gi|356565527|ref|XP_003550991.1| PREDICTED: indole-3-acetic acid-amido synthetase GH3.2-like
           [Glycine max]
          Length = 491

 Score =  279 bits (714), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 151/385 (39%), Positives = 229/385 (59%), Gaps = 3/385 (0%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           ++  E +T++ + +Q+  L +IL +NA  EYL+   LN  TD ++FKS VP+V+++DL+ 
Sbjct: 14  LQFIEDMTQNTDSVQKRVLAEILSQNAKTEYLKRFELNAATDRDTFKSKVPVVSYDDLKH 73

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNRE 133
            IQRI +GD SPIL   PI+    SSGT+ G+ K +P   + M+    ++       N+ 
Sbjct: 74  DIQRIANGDRSPILCAHPISEFLTSSGTSAGERKLMPTIRQEMDRRQLLYSLLMPVMNQY 133

Query: 134 FP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFG 192
            P + KGKAL F++   ++KT  GL A    T++Y+S  FK       +   SPDE I  
Sbjct: 134 VPDLDKGKALLFLFIKAETKTPSGLVARPVLTSLYKSDQFKNRPYDPFNVYTSPDEAILC 193

Query: 193 PDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRIT 252
           PD  QS+Y  +LCGLI R ++  V + FA  L+ A R  +L W EL  DI  G L+ +I+
Sbjct: 194 PDSFQSMYTQMLCGLIMRHQVLRVGAVFASGLLRAIRFLQLNWAELAHDISTGTLNPKIS 253

Query: 253 VPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKK 312
             +I+  M++IL PNPELAD I K+CSG  NW  +I  ++PN KYL  I+TG+M  Y+  
Sbjct: 254 DLAIKQRMTQILTPNPELADFIVKECSG-ENWDRIITRIWPNTKYLDVIVTGAMAQYIPT 312

Query: 313 LRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIP-QRLGNLESQ 371
           L +Y+G LP     Y SSE + G N+NP   P   ++ ++PN+GYFEF+P +   +  S 
Sbjct: 313 LDYYSGGLPKACTMYASSECYFGLNLNPICTPSDVSYTIMPNMGYFEFLPHEEDLSSSSS 372

Query: 372 VLCIEPKPVGLTEVKVGEEYEIIVT 396
              +    + L ++++G+ YE+IVT
Sbjct: 373 SSTLSRDSLDLADLELGKSYELIVT 397


>gi|209405343|gb|ACI46148.1| indole-3-acetic acid amido synthetase [Zea mays]
          Length = 614

 Score =  279 bits (714), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 152/391 (38%), Positives = 227/391 (58%), Gaps = 8/391 (2%)

Query: 12  ELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRT-DPESFKSCVPLVTHED 70
           E ++  E +T + + +Q   L +IL  NA  EYL   GL   T D  +F++ VP+ T+ED
Sbjct: 33  EKLQFIEEMTSNVDAVQERVLGEILARNAGTEYLAKYGLAAATTDRATFRAKVPMATYED 92

Query: 71  LQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLP-FNDELMETTLQIFRTSYAF 129
           LQPYI+RI DGD SPIL+G P++    SSGT+ G+ K +P   DEL    L ++      
Sbjct: 93  LQPYIRRIADGDRSPILSGHPVSEFLTSSGTSAGERKLMPTIEDELNRRQL-LYSLQMPV 151

Query: 130 RNREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDE 188
            N   P + KGKAL F++   ++KT GGL A    T+ Y+S+ FK       +   SP  
Sbjct: 152 MNLYVPGMDKGKALHFLFVKSETKTPGGLAARPVLTSYYKSNHFKNRPFDAYNNYTSPTA 211

Query: 189 VIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLS 248
            I   D  QS+Y  +LCGL  R+++  V + FA  L+ A R  +L WE+L +DI  G L+
Sbjct: 212 AILCADAFQSMYAQMLCGLCQRQDVLRVGAVFASGLLRAIRFLQLNWEQLAEDIEAGSLT 271

Query: 249 SRITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEH 308
            R+T PS+R A++ IL+ +PELA L+  +CS   +W G+I  ++P+ KYL  I+TG+M  
Sbjct: 272 PRVTDPSVREAVAGILRADPELAALVRSECSK-GDWAGIITRIWPSTKYLDVIVTGAMAQ 330

Query: 309 YLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNL 368
           Y+  L++Y+G LP+    Y SSE + G N+ P   P   ++ ++PN+ YFEF+P    + 
Sbjct: 331 YIPTLKYYSGGLPMACTMYASSECYFGLNLRPMCDPSEVSYTLMPNMCYFEFLPM---DS 387

Query: 369 ESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
            +       K V L  V+VG EYE+++T  A
Sbjct: 388 AAASGGDASKLVDLARVEVGREYELVITTYA 418


>gi|356517598|ref|XP_003527474.1| PREDICTED: indole-3-acetic acid-amido synthetase GH3.6-like
           [Glycine max]
          Length = 624

 Score =  279 bits (714), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 156/394 (39%), Positives = 229/394 (58%), Gaps = 10/394 (2%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           ++  E +T +A+ IQ+  L +IL  +A  EYLQ  GL GRTD E+FK  +P+VT+EDL+P
Sbjct: 37  LKYIEDVTSNADEIQKRVLAEILSCSAHVEYLQRHGLEGRTDRETFKKIMPVVTYEDLKP 96

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNRE 133
            I RI +GD SPIL  KPI+    SSGT+ G+ K +P  ++ +E    ++       ++ 
Sbjct: 97  DIDRIANGDASPILCSKPISEFLTSSGTSGGERKLMPTIEDELERRSLLYSLLMPVMDQF 156

Query: 134 FP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQ----SQCCSPDE 188
            P + KGK + F++   +SKT GGL A    T+ Y+SS FK +   +     +   SP E
Sbjct: 157 VPGLDKGKGMYFLFIKSESKTPGGLLARPVLTSYYKSSHFKNKTHGLNFDPYTNYTSPIE 216

Query: 189 VIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLS 248
            I   D +QS+Y  +LCGL   E +  V S FA   + A +  E  WE LC DIR G + 
Sbjct: 217 TILCQDSYQSMYSQMLCGLSQNEHVLRVGSVFASGFIRALKFLEKHWESLCHDIRNGTID 276

Query: 249 SRITVPSIRAAMSKILKPNPELADLIHKKC-SGLSNWYGLIPELFPNAKYLSGIMTGSME 307
             IT  ++R A+ KILKPNP+LAD I  +C  GL  W G+I  L+PN KY+  I+TG+M 
Sbjct: 277 HEITDSTVREAIMKILKPNPKLADFIEGECKKGL--WKGIITRLWPNTKYVDVIVTGTMA 334

Query: 308 HYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIP--QRL 365
            Y+  L +Y+  LPL+   Y SSE + G N+NP   P   ++ ++P + YFEF+P  +  
Sbjct: 335 QYIPMLDYYSNGLPLVCTMYASSECYFGLNLNPLCDPSEVSYTLVPTMAYFEFLPLNKMK 394

Query: 366 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
           G+  S     +   V L +V++ +EYE++VT  A
Sbjct: 395 GHANSISHTEQELLVDLVDVELDQEYELVVTTYA 428


>gi|15221933|ref|NP_175299.1| auxin-responsive GH3-like protein [Arabidopsis thaliana]
 gi|12597811|gb|AAG60122.1|AC073555_6 Nt-gh3 deduced protein, putative [Arabidopsis thaliana]
 gi|332194214|gb|AEE32335.1| auxin-responsive GH3-like protein [Arabidopsis thaliana]
          Length = 573

 Score =  278 bits (712), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 153/385 (39%), Positives = 233/385 (60%), Gaps = 10/385 (2%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           +++ E +T +A++IQ + L++IL  NA+ EYL+   L+G +D E FK  VP+V++ D++P
Sbjct: 7   LKDLEVLTTNAKQIQDDVLKEILTLNANTEYLKRF-LDGSSDKELFKKNVPVVSYNDVKP 65

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNRE 133
           YI+R+ +G+ S +++G  IT   +S+GT+ G  K  P ND+ +E    +   S    + +
Sbjct: 66  YIERVANGEPSDVISGGTITRFVQSTGTSGGIHKIFPVNDKYIENLGYLLAVSSLITSND 125

Query: 134 FPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGP 193
               KGK + F+Y   +SKT  GL   ++ T+ + S  FK       S+  SPD+VI  P
Sbjct: 126 KVDEKGKKMAFLYNRLESKTPSGLALSSSFTSYFMSDYFKNRSSKCNSEYTSPDQVILCP 185

Query: 194 DFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITV 253
           D +QS+YCHLLCGL  RE++  V +TFAH+L+ A    ++ W+EL  +IR G +S  IT 
Sbjct: 186 DNNQSVYCHLLCGLSQREKVVGVSATFAHALIKAINALQIYWKELSSNIRSGHVSEWITD 245

Query: 254 PSIRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKK 312
              + A+S IL  P+PELAD+I ++CS  S W G+I  L+P AK++  I+TG M  Y+  
Sbjct: 246 LDCKNAVSAILGGPDPELADVIEQECSHKS-WEGIITRLWPKAKFIECIVTGQMAQYIPT 304

Query: 313 LRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQV 372
           L  Y+  LP++S  YGSSE   G NV+P   P+  ++  LPNI YFEF+P    + E  +
Sbjct: 305 LDFYSNKLPIVSMVYGSSESIFGVNVDPLSKPQDVSYTFLPNISYFEFLPI---DHEEDM 361

Query: 373 LCIEPKPVGLTEVKVGEEYEIIVTN 397
             I    V L  VK+G  YE +VT+
Sbjct: 362 NTI----VDLVGVKLGCYYETVVTS 382


>gi|297802218|ref|XP_002868993.1| hypothetical protein ARALYDRAFT_490882 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297314829|gb|EFH45252.1| hypothetical protein ARALYDRAFT_490882 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 603

 Score =  278 bits (712), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 151/386 (39%), Positives = 227/386 (58%), Gaps = 4/386 (1%)

Query: 17  FETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQ 76
            E +T++ + +Q + L +IL  N++ EYL+   +NG  D  +FK+ VP+VT+EDL+P IQ
Sbjct: 27  IEEMTRNPDSVQEKVLGEILSRNSNTEYLKRFDINGAIDRNTFKNKVPVVTYEDLKPEIQ 86

Query: 77  RIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP- 135
           RI +GD SPIL+  PIT    SSGT+ G+ K +P  +E ++    ++       N   P 
Sbjct: 87  RISNGDRSPILSSHPITEFLTSSGTSAGERKLMPTIEEDLDRRQLLYSLLMPVMNLYVPG 146

Query: 136 IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDF 195
           + KGK L F++   +SKT GGL A    T+ Y+S  F+       +   SP+E I   D 
Sbjct: 147 LDKGKGLYFLFVKSESKTSGGLPARPVLTSYYKSDHFRRRPYDPYNVYTSPNEAILCSDS 206

Query: 196 HQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPS 255
            QS+Y  +LCGL+ R E+  + + FA  L+ A    +  W+EL  DI  G LSSRI  P+
Sbjct: 207 SQSMYAQMLCGLLMRHEVLRLGAVFASGLLRAISFLQNNWKELARDISTGTLSSRIFDPT 266

Query: 256 IRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLR 314
           I+  MSKIL KP+ ELA+ +   CS   NW G+I +++PN KYL  I+TG+M  Y+  L 
Sbjct: 267 IKNRMSKILIKPDQELAEFLIGVCSQ-ENWEGIITKIWPNTKYLDVIVTGAMAQYIPTLE 325

Query: 315 HYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRL-GNLESQVL 373
           +Y+G LP+    Y SSE + G N+ P   P   ++ ++PN+ YFEF+P    G+  ++  
Sbjct: 326 YYSGGLPMACTMYASSESYFGINLKPMCKPSEVSYTIMPNMAYFEFLPHNHDGDGATEAS 385

Query: 374 CIEPKPVGLTEVKVGEEYEIIVTNVA 399
             E   V L +V+VG+EYE+++T  A
Sbjct: 386 LDETSLVELADVEVGKEYELVITTYA 411


>gi|449442409|ref|XP_004138974.1| PREDICTED: indole-3-acetic acid-amido synthetase GH3.5-like
           [Cucumis sativus]
 gi|449477861|ref|XP_004155145.1| PREDICTED: indole-3-acetic acid-amido synthetase GH3.5-like
           [Cucumis sativus]
          Length = 598

 Score =  278 bits (712), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 153/394 (38%), Positives = 232/394 (58%), Gaps = 13/394 (3%)

Query: 12  ELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDL 71
           E ++  + IT +A  IQR+ L +IL  NA+ EYLQ  GL+  T   +FK  +PLV++E L
Sbjct: 16  EALQHIQHITSNAGEIQRQILSEILSTNANVEYLQQHGLHASTGSSTFKKLIPLVSYEQL 75

Query: 72  QPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRN 131
           +PYI RI +GD SPIL   PIT    SSGT+ G+PK +P  ++  E  L  F    A   
Sbjct: 76  KPYITRIAEGDDSPILCSNPITAFFLSSGTSGGEPKLVPIYEKEFERRLSFFNYLMARTK 135

Query: 132 REFP---IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQS-QCCSPD 187
             FP     KGKA+ F +     KTK G+   T  + + + S     +K+++S     PD
Sbjct: 136 ELFPNINWHKGKAMNFHFAKPDHKTKAGILVHTVFSRLLKRS---LNLKSVESGNNAIPD 192

Query: 188 EVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVL 247
           +++   + +QSLYC LLCGL   + +  V +  A  L+H F+  E  W +L  DIR G +
Sbjct: 193 DILRCTNTYQSLYCQLLCGLYQNDLVFQVGAVLASGLIHVFKFLENHWVDLVSDIRRGSI 252

Query: 248 SS-RITVPSIRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGS 305
           ++ +IT  S+R ++ KIL KPNP+LADLI  +CS    W G++P+L+PN KY+  I TGS
Sbjct: 253 NNPKITDLSLRESVMKILVKPNPQLADLIETECSK-GKWKGIVPKLWPNTKYIKAIATGS 311

Query: 306 MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRL 365
           +  Y+  L +Y  +LP+ S  YGS+E ++G N++P   P   ++ ++P + YFEF+P   
Sbjct: 312 LSQYIPLLNYYTNNLPIFSDHYGSTECFLGLNLDPICDPNETSYTLIPTMAYFEFLPIDT 371

Query: 366 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
            N+  +V     + V L +VK+G+EYE+++T  A
Sbjct: 372 TNINGEV---TQELVDLVDVKLGQEYELVITTFA 402


>gi|115473129|ref|NP_001060163.1| Os07g0592600 [Oryza sativa Japonica Group]
 gi|122167127|sp|Q0D4Z6.1|GH38_ORYSJ RecName: Full=Probable indole-3-acetic acid-amido synthetase GH3.8;
           AltName: Full=Auxin-responsive GH3-like protein 8;
           Short=OsGH3-8
 gi|158513704|sp|A3BLS0.2|GH38_ORYSI RecName: Full=Probable indole-3-acetic acid-amido synthetase GH3.8;
           AltName: Full=Auxin-responsive GH3-like protein 8;
           Short=OsGH3-8
 gi|33146510|dbj|BAC79627.1| putative Nt-gh3 deduced protein [Oryza sativa Japonica Group]
 gi|113611699|dbj|BAF22077.1| Os07g0592600 [Oryza sativa Japonica Group]
 gi|124518471|gb|ABN13880.1| auxin-responsive GH3-8 protein [Oryza sativa Indica Group]
 gi|218199947|gb|EEC82374.1| hypothetical protein OsI_26708 [Oryza sativa Indica Group]
 gi|222637381|gb|EEE67513.1| hypothetical protein OsJ_24963 [Oryza sativa Japonica Group]
          Length = 605

 Score =  278 bits (712), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 154/394 (39%), Positives = 225/394 (57%), Gaps = 10/394 (2%)

Query: 9   DVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTH 68
           DV++L    + +T + + +Q   L +IL  NA  EYL   GL+G TD  +F++ VP+V++
Sbjct: 26  DVEKL-RFIDEMTTNVDAVQERVLGEILGRNAGTEYLTKCGLDGATDRAAFRAKVPVVSY 84

Query: 69  EDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLP-FNDELMETTLQIFRTSY 127
           +DLQPYIQRI +GD SPIL+  P++    SSGT+ G+ K +P   DEL    L ++    
Sbjct: 85  DDLQPYIQRIANGDRSPILSTHPVSEFLTSSGTSAGERKLMPTIMDELDRRQL-LYSLLM 143

Query: 128 AFRNREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSP 186
              N   P + KGK L F++   ++KT GGL A    T+ Y+S  FK           SP
Sbjct: 144 PVMNLYVPGLDKGKGLYFLFVKSETKTPGGLTARPVLTSYYKSDHFKNRPYDPYHNYTSP 203

Query: 187 DEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGV 246
              I   D  QS+Y  ++CGL  R ++  + + FA  L+ A R  +L WE+L DDI  G 
Sbjct: 204 TAAILCADAFQSMYAQMVCGLCQRNDVLRLGAVFASGLLRAIRFLQLNWEQLADDIESGE 263

Query: 247 LSSRITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSM 306
           L+ R+T PS+R A++ IL P+PELA LI  +CS   +W G+I  ++PN KYL  I+TG+M
Sbjct: 264 LTPRVTDPSVREAVAAILLPDPELAKLIRAECSK-GDWAGIITRVWPNTKYLDVIVTGAM 322

Query: 307 EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIP-QRL 365
             Y+  L  Y+G LP+    Y SSE + G N+ P   P   ++ ++PN+GYFEF+P    
Sbjct: 323 AQYIPTLEFYSGGLPMACTMYASSECYFGLNLRPMCDPSEVSYTIMPNMGYFEFLPVDET 382

Query: 366 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
           G        +    V L  V+VG EYE+++T  A
Sbjct: 383 GAASGDATQL----VDLARVEVGREYELVITTYA 412


>gi|356544856|ref|XP_003540863.1| PREDICTED: indole-3-acetic acid-amido synthetase GH3.6-like
           [Glycine max]
          Length = 629

 Score =  278 bits (711), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 154/392 (39%), Positives = 227/392 (57%), Gaps = 8/392 (2%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           ++  E +T +A+ IQ+  L +IL  +A AEYLQ  GL+GRTD E+FK  +P+VT+EDL+P
Sbjct: 35  LKYIEDVTSNADEIQKRVLAEILSSSAHAEYLQRHGLDGRTDRETFKKIMPVVTYEDLKP 94

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNRE 133
            I RI +GD SPIL  KPI+    SSGT+ G+ K +P  +E +E    ++        + 
Sbjct: 95  DIDRIANGDTSPILCSKPISEFLTSSGTSGGERKLMPTIEEELERRSLLYSLLMPVMEQF 154

Query: 134 FP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQ--SQCCSPDEVI 190
            P + KGK + F++   ++KT GGL A    T+ YRSS FK +       +   SP E I
Sbjct: 155 VPGLDKGKGMYFLFIKSEAKTPGGLLARPVLTSYYRSSHFKNKTHCFDPYTNYTSPIETI 214

Query: 191 FGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSR 250
              D +QS+Y  +LCGL   E +  V + FA   + A +  E  W  LC DIR G +   
Sbjct: 215 LCLDSYQSMYSQMLCGLSQNEHVLRVGAVFASGFIRALKFLEKHWVCLCRDIRNGTIGPE 274

Query: 251 ITVPSIRAAMSKILKPNPELADLIHKKC-SGLSNWYGLIPELFPNAKYLSGIMTGSMEHY 309
           IT  S+R A+ ++LKPNP+LAD I  +C  GL  W G+I  L+PN KY+  I+TG+M  Y
Sbjct: 275 ITDSSVREAIMRVLKPNPKLADFIEGECKKGL--WKGIITRLWPNTKYVDVIVTGTMAQY 332

Query: 310 LKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLE 369
           +  L +Y+  LPL+   Y SSE + G N+NP   P   ++ ++P + YFEF+P       
Sbjct: 333 IPMLDYYSNGLPLVCTMYASSECYFGLNLNPLCDPSEVSYTLVPTMAYFEFLPLNKTKEH 392

Query: 370 SQVLCIEPKP--VGLTEVKVGEEYEIIVTNVA 399
           +  +    +   V L +V++G+EYE++VT  A
Sbjct: 393 ANSISYTEQELLVDLVDVELGQEYELVVTTYA 424


>gi|357452539|ref|XP_003596546.1| Indole-3-acetic acid-amido synthetase GH3.6 [Medicago truncatula]
 gi|124361087|gb|ABN09059.1| GH3 auxin-responsive promoter [Medicago truncatula]
 gi|355485594|gb|AES66797.1| Indole-3-acetic acid-amido synthetase GH3.6 [Medicago truncatula]
          Length = 607

 Score =  278 bits (711), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 156/398 (39%), Positives = 224/398 (56%), Gaps = 13/398 (3%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           ++  E IT  A+ IQ++ L +IL  NA+ EYLQ  GLNG TD E+FK  +P++T+ED+Q 
Sbjct: 17  LDFIEDITTHADEIQKKVLAEILNRNANVEYLQRHGLNGHTDSETFKKLLPIITYEDIQN 76

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNRE 133
            I  I +GD SPILT  PI+    SSGT+ G+ K +P  +E       ++       ++ 
Sbjct: 77  DINLIANGDTSPILTSNPISNFLTSSGTSGGERKLMPATEEEFGRRYLLYSYLMPIMSQF 136

Query: 134 FP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFG 192
            P + KGK +  ++   +SKT GG+ A    TN Y+SS F        +   SP+E +  
Sbjct: 137 IPDLEKGKGMYLMFIKNESKTPGGIKASPVLTNYYKSSHFLNRPYDPYTNFTSPNETVLC 196

Query: 193 PDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRIT 252
            D +QS+Y  LLCGLI   E+  V + FA  L+ A R  E  W  LC+DIR G L   IT
Sbjct: 197 LDSYQSMYSQLLCGLIQNNEVLRVGAVFASGLIRAIRFLEKNWRLLCNDIRTGTLDLLIT 256

Query: 253 VPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKK 312
             S+R A+ KILKPN  LAD +  +C+  S W G+I  L+PN KY+  I+TG+M  Y+  
Sbjct: 257 DDSVREAVMKILKPNKNLADFVEGECNKGS-WQGIITRLWPNTKYVDVIVTGTMSQYIPT 315

Query: 313 LRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLE--- 369
           L +Y+  LPL+   Y SSE + G N+NP   P   ++ ++P + Y+EF+P    N E   
Sbjct: 316 LDYYSNGLPLVCTMYASSECYFGVNLNPLSKPCHVSYTLIPTMCYYEFLPVNRSNCEVNG 375

Query: 370 ----SQVLCIEPKP----VGLTEVKVGEEYEIIVTNVA 399
               S    +  K     V L +VK+G+EYE++VT  A
Sbjct: 376 SIPPSTTKSLGEKKYQEVVDLVDVKLGQEYELVVTTYA 413


>gi|297807355|ref|XP_002871561.1| hypothetical protein ARALYDRAFT_488150 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297317398|gb|EFH47820.1| hypothetical protein ARALYDRAFT_488150 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 574

 Score =  278 bits (710), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 152/394 (38%), Positives = 230/394 (58%), Gaps = 14/394 (3%)

Query: 9   DVDELIE-EFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVT 67
           D++E  E + + +T D ++IQ   L +I+  N   EYLQ   L GR D + FK  VP+VT
Sbjct: 6   DINESFEKQLKYLTSDVKQIQDNLLEEIITPNTKTEYLQRF-LIGRFDKDLFKKNVPIVT 64

Query: 68  HEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSY 127
           +ED++PY+ R+++G+ S +++ +PIT    SSGT+ G  K +P+N++ ++    I+    
Sbjct: 65  YEDIKPYLDRVVNGESSDVISARPITGFLLSSGTSGGAQKMMPWNNKYLDNLTFIYDLRM 124

Query: 128 AFRNREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSP 186
               +    + +GK + F++  ++S T  GL A  AT++ ++S  FK           SP
Sbjct: 125 QVITKHVKGVEEGKGMMFLFTKQESMTPSGLPARVATSSYFKSDYFKHRPSNWYYSYTSP 184

Query: 187 DEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGV 246
           DEVI  P+  QSLYCHLLCGL+ R+E+    S FA  +V A    +  WEELC +IR G 
Sbjct: 185 DEVILCPNNTQSLYCHLLCGLVQRDEVVRTGSIFASVMVRAIEVLKNSWEELCSNIRSGH 244

Query: 247 LSSRITVPSIRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGS 305
           LS+ +T    ++++S +L  P PELAD I + C+  S W G++  L+PN KY+  ++TGS
Sbjct: 245 LSNWVTDLGCQSSVSLVLGGPRPELADTIEEICNQKS-WKGIVKRLWPNTKYIETVVTGS 303

Query: 306 MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRL 365
           M  Y+  L +Y  DLPL+S  YGSSE   G N++P   PE  ++  +PN+ YFEFIP   
Sbjct: 304 MGQYVPMLNYYCNDLPLVSTTYGSSETTFGINLDPLCKPEDVSYTFMPNMSYFEFIPMDG 363

Query: 366 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
            N +          V L +VK+G  YE +VTN A
Sbjct: 364 DNNDV---------VDLEDVKLGCTYEPVVTNFA 388


>gi|326508166|dbj|BAJ99350.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 655

 Score =  277 bits (709), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 154/398 (38%), Positives = 226/398 (56%), Gaps = 22/398 (5%)

Query: 12  ELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDL 71
           E +E  E +TK  +  Q+  L  ILE N SAEYL+  G+ GRTD  SFK+ VP+VT+EDL
Sbjct: 74  EKLELIEQLTKGFDAEQQRVLAAILERNNSAEYLRRHGMEGRTDRGSFKARVPVVTYEDL 133

Query: 72  QPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRN 131
           +P I+RI +GD S I++  PI+    SSGT+ G+ K +P  ++ ++    ++       N
Sbjct: 134 RPEIERIANGDRSNIISSHPISEFLTSSGTSAGERKLMPTIEDELDRRQMLYSLLMPVMN 193

Query: 132 REFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVI 190
              P + KGK L F++   +++T GGL A    T+ Y+S  FK           SP   I
Sbjct: 194 LFVPGLDKGKGLYFLFIKSETETPGGLPARPVLTSYYKSDHFKYRPFDPYQVYTSPTAAI 253

Query: 191 FGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSR 250
              D  QS+Y  +LCGL+ R E+  V + FA  L+ A R  +L W+EL  DI  G LS R
Sbjct: 254 LCTDSFQSMYSQMLCGLLVRTEVLRVGAVFASGLLRAIRFLQLHWKELAGDIETGTLSGR 313

Query: 251 ITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYL 310
           +  PSIR A++++LKP+PELA  +  +C G  NW G+I  ++PN +YL  I+TG+M  Y+
Sbjct: 314 VVEPSIRDAVAEVLKPDPELAAFVAAEC-GKDNWEGIITRMWPNTRYLDVIVTGAMAQYI 372

Query: 311 KKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQ------- 363
             L+ Y+G LP+    Y SSE + G N+ P   P   ++ ++PN+GYFE +P        
Sbjct: 373 PTLKFYSGGLPMACTMYASSECYFGLNLRPMCDPSEVSYTIMPNMGYFELMPHDPAAAAE 432

Query: 364 --RLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
             R G+L           V L E +VG+EYE+++T  A
Sbjct: 433 AARDGDL-----------VELAEAEVGKEYELVITTYA 459


>gi|449527595|ref|XP_004170795.1| PREDICTED: LOW QUALITY PROTEIN: indole-3-acetic acid-amido
           synthetase GH3.6-like [Cucumis sativus]
          Length = 597

 Score =  277 bits (709), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 155/392 (39%), Positives = 230/392 (58%), Gaps = 9/392 (2%)

Query: 12  ELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDL 71
           E ++  E IT  A+ IQR+ L +IL  NA+ EYLQ  GL   TD  +FK  +PLV +E L
Sbjct: 15  EALQYIEDITTKADEIQRQILNEILSTNANVEYLQQHGLVVPTDSSTFKKLIPLVCYEQL 74

Query: 72  QPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRN 131
           +PYI RI DGD S IL   PIT   +SSGT+ G+ K +P  ++     L  F        
Sbjct: 75  RPYIARIADGDDSSILCSNPITEFFKSSGTSGGEHKLIPMYEQEFVRRLSFFSYIMPRMK 134

Query: 132 REFP---IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDE 188
           + FP     K K L F +   + KTKGG+   +  TN+++ S+    M +  +   SPD+
Sbjct: 135 QLFPDINWHKVKGLNFHFAKPEFKTKGGIIVRSIFTNLHKRSSNLESMPSGNN--TSPDD 192

Query: 189 VIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLS 248
           +I   D +QSLYC LLCGL   E +  V + FA +L+H F+  E  W +L  DIR   ++
Sbjct: 193 IILCTDSYQSLYCQLLCGLYQNEVVFRVSALFASTLIHVFKFLENHWVDLATDIRTRTVN 252

Query: 249 SRITVPSIRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSME 307
            +IT  S+R ++ KI+ KPNPE+ADLI  +C     W G+I  L+PNAKY++ I+TGSM 
Sbjct: 253 PKITNSSVRESVMKIIVKPNPEVADLIENECRK-GRWEGIITRLWPNAKYINAIVTGSMS 311

Query: 308 HYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGN 367
            Y+  L +Y  +LP++S  YGSSE ++G N++P    +  ++ ++P + YFEF+P  + N
Sbjct: 312 QYIPLLNYYTNNLPIVSDHYGSSECFLGLNLDPLCNHDEVSYTLIPTMAYFEFLPIDMIN 371

Query: 368 LESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
             +    +  + V L +VK+G EYE+++T  A
Sbjct: 372 DPNGE--VNQQLVDLVDVKLGREYELVITTFA 401


>gi|449464438|ref|XP_004149936.1| PREDICTED: indole-3-acetic acid-amido synthetase GH3.6-like
           [Cucumis sativus]
 gi|449516764|ref|XP_004165416.1| PREDICTED: indole-3-acetic acid-amido synthetase GH3.6-like
           [Cucumis sativus]
          Length = 604

 Score =  277 bits (709), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 147/390 (37%), Positives = 232/390 (59%), Gaps = 7/390 (1%)

Query: 13  LIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQ 72
           +++  E +T +A  +QR+ L +IL +N+++EYL    L GR   ++FK+ +PLV+++ +Q
Sbjct: 22  ILQFIEDVTTNAALVQRQVLSQILSQNSNSEYLT---LYGRPSSDTFKTSIPLVSYDQIQ 78

Query: 73  PYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNR 132
           P++ RI +GD SPIL   PI+    SSGT+ G+ K +P  +E ++    ++        +
Sbjct: 79  PFVSRIANGDFSPILCSSPISEFLTSSGTSGGERKLMPTIEEELDRRSLLYSLLMPVMTQ 138

Query: 133 EFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIF 191
             P + KGK + F++   ++KT GGL A    T+ Y+SS FK       +   SP+E I 
Sbjct: 139 FVPGLEKGKGMYFLFIKAEAKTPGGLLARPVLTSYYKSSHFKERPYDPYTNYTSPNEAIL 198

Query: 192 GPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRI 251
            PD +QS+Y  LLCGL  R ++  V + FA   + A R  E  W+ LC DIR G L+S+I
Sbjct: 199 CPDSYQSMYAQLLCGLCHRLDVLRVGAVFASGFIRAIRFLEKHWQLLCHDIRTGTLNSQI 258

Query: 252 TVPSIR-AAMSKILK-PNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHY 309
           T  ++R A MS +L+ P+PELAD +H +C     W G+I  L+PN KY+  I+TG+M  Y
Sbjct: 259 TDQAVRDAVMSSVLRGPDPELADYVHGECCK-GWWQGIITRLWPNTKYVDVIVTGTMSQY 317

Query: 310 LKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLE 369
           +  L +Y+  LPL+   Y SSE + G N+NP   P    + ++P++ YFEF+P    ++ 
Sbjct: 318 ITTLDYYSNGLPLVCTMYASSECYFGVNLNPLCKPSEVAYTLIPSMAYFEFLPVERSHIN 377

Query: 370 SQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
                 E + V LT+V++G+EYE++VT  A
Sbjct: 378 DDNSLNEQQLVDLTDVELGKEYELVVTTYA 407


>gi|449444564|ref|XP_004140044.1| PREDICTED: indole-3-acetic acid-amido synthetase GH3.6-like
           [Cucumis sativus]
          Length = 597

 Score =  277 bits (708), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 155/392 (39%), Positives = 230/392 (58%), Gaps = 9/392 (2%)

Query: 12  ELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDL 71
           E ++  E IT  A+ IQR+ L +IL  NA+ EYLQ  GL   TD  +FK  +PLV +E L
Sbjct: 15  EALQYIEDITTKADEIQRQILNEILSTNANVEYLQQHGLVVPTDSPTFKKLIPLVCYEQL 74

Query: 72  QPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRN 131
           +PYI RI DGD S IL   PIT   +SSGT+ G+ K +P  ++     L  F        
Sbjct: 75  RPYIARIADGDDSSILCSNPITEFFKSSGTSGGEHKLIPMYEQEFVRRLSFFSYIMPRMK 134

Query: 132 REFP---IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDE 188
           + FP     K K L F +   + KTKGG+   +  TN+++ S+    M +  +   SPD+
Sbjct: 135 QLFPDINWHKVKGLNFHFAKPEFKTKGGIIVRSIFTNLHKRSSNLESMPSGNN--TSPDD 192

Query: 189 VIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLS 248
           +I   D +QSLYC LLCGL   E +  V + FA +L+H F+  E  W +L  DIR   ++
Sbjct: 193 IILCTDSYQSLYCQLLCGLYQNEVVFRVSALFASTLIHVFKFLENHWVDLATDIRTRTVN 252

Query: 249 SRITVPSIRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSME 307
            +IT  S+R ++ KI+ KPNPE+ADLI  +C     W G+I  L+PNAKY++ I+TGSM 
Sbjct: 253 PKITNSSVRESLMKIIVKPNPEVADLIENECRK-GRWEGIITRLWPNAKYINAIVTGSMS 311

Query: 308 HYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGN 367
            Y+  L +Y  +LP++S  YGSSE ++G N++P    +  ++ ++P + YFEF+P  + N
Sbjct: 312 QYIPLLNYYTNNLPIVSDHYGSSECFLGLNLDPLCNHDEVSYTLIPTMAYFEFLPIDMIN 371

Query: 368 LESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
             +    +  + V L +VK+G EYE+++T  A
Sbjct: 372 DPNGE--VNQQLVDLVDVKLGREYELVITTFA 401


>gi|302817228|ref|XP_002990290.1| hypothetical protein SELMODRAFT_131513 [Selaginella moellendorffii]
 gi|300141852|gb|EFJ08559.1| hypothetical protein SELMODRAFT_131513 [Selaginella moellendorffii]
          Length = 582

 Score =  276 bits (707), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 166/416 (39%), Positives = 246/416 (59%), Gaps = 20/416 (4%)

Query: 11  DELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHED 70
           D L   FE + ++   +Q E L +IL +NA A+YL+   LNG TD E+FK+ +PL+T+ D
Sbjct: 11  DALTYGFEELARNGNVVQAELLEQILVQNADADYLKEHKLNGCTDLETFKARLPLITYAD 70

Query: 71  LQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFR 130
           ++ YIQ+I DGD SP+L  KP+     SSGT +G+ K +P + +    T+++F+ S AFR
Sbjct: 71  IEGYIQKIADGDQSPVLCQKPVDMFFLSSGTAKGRTKLIPAHYDFFLNTIRLFQLSGAFR 130

Query: 131 NREFPI-GKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEV 189
            R FP+    K +  +Y  KQ+ TKGG+  GT TTN +RS  FK + ++ +    SP+EV
Sbjct: 131 GRHFPLSSNAKVMDIVYCGKQTMTKGGILTGTGTTNYFRSEAFKLKQQSTKMFNSSPNEV 190

Query: 190 IFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSS 249
           IF     Q+ YCHLL  L+  ++I ++ STF +++V AFR  E  W  L D I  G L  
Sbjct: 191 IFSSSLPQATYCHLLFALLAADDIAVISSTFVYTIVEAFRFLEKTWSILADCIESGTLPE 250

Query: 250 RITVPSIRAAMSKIL-KPNPE-----LADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMT 303
            IT  +I+   SK L + +P+     LA  I  +CS    + G+IP L+ N  Y+  IMT
Sbjct: 251 WITDHAIQTVASKQLTQDHPDRDRGTLAAKIRLECS--RGFQGIIPRLWRNTSYVLSIMT 308

Query: 304 GSMEHYLKKLRHYAG-DLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIP 362
           G+M  Y + +R YAG  L L+  DYG+SE W+G N++P   P    F ++P++ YFEFIP
Sbjct: 309 GTMLSYCEAMRFYAGPGLALVCGDYGASESWMGINIDPLSSPHNTIFTIVPDLAYFEFIP 368

Query: 363 -QRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVAVAGSLFSR----IPICGL 413
            +R  +L ++V      PV + +V+VG+EYEI +T  + AG    R    + ICG 
Sbjct: 369 LERRNSLFTEV----AAPVSMADVRVGQEYEIAITT-SSAGLYRYRVGDVVRICGF 419


>gi|414867316|tpg|DAA45873.1| TPA: hypothetical protein ZEAMMB73_156027 [Zea mays]
          Length = 618

 Score =  276 bits (707), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 145/389 (37%), Positives = 218/389 (56%), Gaps = 4/389 (1%)

Query: 12  ELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDL 71
           E +   E +T D + +Q   L +IL  NA  EYL   GL G TD  +F++ VP+VT+EDL
Sbjct: 30  EKLRFIEEMTSDVDAVQERVLAEILARNAGTEYLARCGLAGATDRAAFRAKVPVVTYEDL 89

Query: 72  QPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRN 131
           QP IQRI +GD SPIL+  PI+    SSGT+ G+ K +P   E ++    ++       N
Sbjct: 90  QPDIQRIANGDRSPILSAHPISEFLTSSGTSAGERKLMPTIKEELDRRQLLYSLLMPVMN 149

Query: 132 REFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVI 190
              P + KGKAL F++   ++ T GGL A    T+ Y+S  FK           SP   I
Sbjct: 150 LYLPGLDKGKALYFLFVKSETTTPGGLTARPVLTSYYKSEHFKNRPFDPYHDYTSPTAAI 209

Query: 191 FGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSR 250
              D  QS+Y  ++CGL  R ++  V + FA  L+ A R  +L WE+L DDI  G L+ R
Sbjct: 210 LCADAFQSMYAQMVCGLCQRHDVLRVGAVFASGLLRAIRFLQLHWEQLADDIESGSLTPR 269

Query: 251 ITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYL 310
           +  PS+R A++++L+ +PELA  +  +CS   +W G++  ++PN +YL  I+TG+M+ Y+
Sbjct: 270 VADPSVRDAVARVLRGDPELARFVRAECS-RGDWAGIVTRVWPNTRYLDVIVTGAMQQYI 328

Query: 311 KKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLES 370
             L +Y+G LP+    Y SSE + G N+ P   P    + ++PN+GYFEF+P  +     
Sbjct: 329 PTLEYYSGGLPMACTMYASSECYFGLNLRPMCRPSEVCYTIMPNMGYFEFLP--VDEASG 386

Query: 371 QVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
                  + V L  V+ G EYE+++T  A
Sbjct: 387 VAPGDAAQLVDLARVEAGREYELVITTYA 415


>gi|297837595|ref|XP_002886679.1| GH3.4 [Arabidopsis lyrata subsp. lyrata]
 gi|297332520|gb|EFH62938.1| GH3.4 [Arabidopsis lyrata subsp. lyrata]
          Length = 597

 Score =  276 bits (705), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 152/385 (39%), Positives = 224/385 (58%), Gaps = 8/385 (2%)

Query: 17  FETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQ 76
            E +T++ + +Q + L +IL  N++ EYL+   LNG  D ++FKS VP+V +EDL+  IQ
Sbjct: 27  IEEMTRNPDSVQEKVLGEILSRNSNTEYLKRFDLNGAVDRKTFKSKVPVVMYEDLKTEIQ 86

Query: 77  RIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP- 135
           RI +GD SPIL+  PI     SSGT+ G+ K +P  +E +     +        N   P 
Sbjct: 87  RISNGDRSPILSSHPINEFLTSSGTSSGERKLMPTIEEDIHRRQLLGSLLMPVMNLYLPG 146

Query: 136 IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDF 195
           + KGK L F++   +SKT GGL A  A T+ Y+S  FK     +Q+   SP E I   D 
Sbjct: 147 LDKGKGLYFLFVKSESKTSGGLPARPALTSYYKSDHFKT--SDLQNDYTSPREAILCSDS 204

Query: 196 HQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPS 255
            QS+Y  +LCGL+ R E+  + + F   L+ A    +  W+EL  DI  G+LSS+I  P+
Sbjct: 205 SQSMYAQMLCGLLMRHEVLRLGAVFPSGLLRAISFLQNNWKELAQDISTGILSSKIFDPA 264

Query: 256 IRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLR 314
           +   MSKIL KP+ ELA+ +   CS   NW G+I +++PN KYL  I+TG+M  Y+  L 
Sbjct: 265 VNNRMSKILNKPDEELAEFLIGVCSQ-ENWEGIITKIWPNTKYLDVIITGAMAQYIPMLE 323

Query: 315 HYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLC 374
           +Y+G LP+ S  Y SSE + G N+NP   P   ++ ++PN+ YFEF+P    N +     
Sbjct: 324 YYSGGLPIASTIYASSESYFGINLNPMCKPSEVSYTIMPNMAYFEFLPH---NHDGDGAL 380

Query: 375 IEPKPVGLTEVKVGEEYEIIVTNVA 399
            E   V L +V+VG+EYE+++T  A
Sbjct: 381 DETSLVELADVEVGKEYELVITTYA 405


>gi|307752225|gb|ADN93114.1| indole-3-acetic acid-amido synthetase [Oryza sativa Indica Group]
          Length = 614

 Score =  275 bits (704), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 150/390 (38%), Positives = 222/390 (56%), Gaps = 3/390 (0%)

Query: 12  ELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDL 71
           E +E  E IT+  + +Q   L  IL  N  AEYL+  G+ GRTD E+FK+ VP+VT+EDL
Sbjct: 31  EKLEFIEEITRGFDAVQERVLAAILARNNGAEYLRRHGMEGRTDREAFKARVPVVTYEDL 90

Query: 72  QPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRN 131
           +P I+RI +GD S I++  PIT    SSGT+ G+ K +P  ++ ++    ++       N
Sbjct: 91  RPEIERIANGDRSNIISSHPITEFLTSSGTSAGERKLMPTIEDELDRRQMLYSLLMPVMN 150

Query: 132 REFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVI 190
              P + KGK L F++   ++KT GGL A    T+ Y+S  FK       +   SP   I
Sbjct: 151 LYVPGLDKGKGLYFLFIKSETKTPGGLPARPVLTSYYKSDHFKHRPFDPYNVYTSPTAAI 210

Query: 191 FGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSR 250
              D  QS+Y  +LCGL+ R E+  V + FA  L+ A R  +L W EL  DIR G LS++
Sbjct: 211 LCTDAFQSMYAQMLCGLVARAEVLRVGAVFASGLLRAIRFLQLHWRELAHDIRTGTLSAK 270

Query: 251 ITVPSIRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHY 309
           +T PSIR A++++L  P+ ELA  +  +C G   W G+I  ++PN KYL  I+TG+M  Y
Sbjct: 271 VTEPSIRDAVAEVLAAPDAELAAFVEAEC-GKDKWEGIITRMWPNTKYLDVIVTGAMAQY 329

Query: 310 LKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLE 369
           +  L+ Y+G LP+    Y SSE + G N+ P   P   ++ ++PN+GYFE +P       
Sbjct: 330 IPTLKFYSGGLPMACTMYASSECYFGLNLRPMCDPSEVSYTIMPNMGYFELMPHDPDAPP 389

Query: 370 SQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
                  P+ V L + +VG EYE+++T  A
Sbjct: 390 LPRDAPPPRLVDLADAEVGREYELVITTYA 419


>gi|302794901|ref|XP_002979214.1| hypothetical protein SELMODRAFT_110439 [Selaginella moellendorffii]
 gi|300152982|gb|EFJ19622.1| hypothetical protein SELMODRAFT_110439 [Selaginella moellendorffii]
          Length = 582

 Score =  275 bits (704), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 166/416 (39%), Positives = 246/416 (59%), Gaps = 20/416 (4%)

Query: 11  DELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHED 70
           D L   FE + ++   +Q E L +IL +NA A+YL+   LNG TD E+FK+ +PL+T+ D
Sbjct: 11  DALTYGFEELARNGNAVQAELLEQILVQNADADYLKEHKLNGCTDLETFKARLPLITYAD 70

Query: 71  LQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFR 130
           ++ YIQ+I DGD SP+L  KP+     SSGT +G+ K +P + +    T+++F+ S AFR
Sbjct: 71  IEGYIQKIADGDQSPLLCQKPVDMFFLSSGTAKGRTKLIPAHYDFFLNTIRLFQLSGAFR 130

Query: 131 NREFPI-GKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEV 189
            R FP+    K +  +Y  KQ+ TKGG+  GT TTN +RS  FK + ++ +    SP+EV
Sbjct: 131 GRHFPLSSNAKVMDIVYCGKQTMTKGGILTGTGTTNYFRSEAFKLKQQSTKMFNSSPNEV 190

Query: 190 IFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSS 249
           IF     Q+ YCHLL  L+  ++I ++ STF +++V AFR  E  W  L D I  G L  
Sbjct: 191 IFSSSLPQATYCHLLFALLAADDIAVISSTFVYTIVEAFRFLEKTWSILADCIESGTLPE 250

Query: 250 RITVPSIRAAMSKIL-KPNPE-----LADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMT 303
            IT  +I+   SK L + +P+     LA  I  +CS    + G+IP L+ N  Y+  IMT
Sbjct: 251 WITDHAIQTVASKQLTQDHPDRDRGTLAAKIRLECS--RGFQGIIPRLWRNTSYVLSIMT 308

Query: 304 GSMEHYLKKLRHYAG-DLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIP 362
           G+M  Y + +R YAG  L L+  DYG+SE W+G N++P   P    F ++P++ YFEFIP
Sbjct: 309 GTMLSYCEAMRFYAGPGLALVCGDYGASESWMGINMDPLSSPHNTIFTIVPDLAYFEFIP 368

Query: 363 -QRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVAVAGSLFSR----IPICGL 413
            +R  +L ++V      PV + +V+VG+EYEI +T  + AG    R    + ICG 
Sbjct: 369 LERRNSLFTEV----AAPVSMADVRVGQEYEIAITT-SSAGLYRYRVGDVVRICGF 419


>gi|357122149|ref|XP_003562778.1| PREDICTED: probable indole-3-acetic acid-amido synthetase
           GH3.8-like [Brachypodium distachyon]
          Length = 616

 Score =  275 bits (703), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 147/391 (37%), Positives = 222/391 (56%), Gaps = 11/391 (2%)

Query: 12  ELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDL 71
           E ++  E +T + + +Q   L +IL  N   EYL+N GL+G TD  +F++ VP+V+++ L
Sbjct: 39  EKLQFIEEMTTNVDAVQERVLAEILGRNGGTEYLKNCGLDGATDRATFRAKVPVVSYDAL 98

Query: 72  QPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLP-FNDELMETTLQIFRTSYAFR 130
           QPYIQRI++GD SPIL+  P++    SSGT+ G+ K +P   DEL    L ++       
Sbjct: 99  QPYIQRIVNGDRSPILSSHPVSEFLTSSGTSAGERKLMPTIQDELDRRQL-LYSLLMPVM 157

Query: 131 NREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEV 189
           N   P + KGK L F++   ++KT  GL A    T+ Y+S  FK           SP   
Sbjct: 158 NLHLPGLDKGKGLYFLFVKSETKTPSGLTARPVLTSYYKSEQFKNRPYDPYHNYTSPTAA 217

Query: 190 IFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSS 249
           I   D  QS+Y  +LCGL  R ++  V + FA  L+ A R  +L WE+L +DI  G L+ 
Sbjct: 218 ILCADAFQSMYAQMLCGLCQRHDVLRVGAVFASGLLRAIRFLQLNWEQLANDIEAGELTP 277

Query: 250 RITVPSIRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEH 308
           R+T  S+R A++ IL +P+PELA  +  +C G   W G++  ++PN +YL  I+TG+M  
Sbjct: 278 RVTDASVRDAVAGILRRPDPELARFVRAEC-GKGEWAGIVTRVWPNTRYLDVIVTGAMAQ 336

Query: 309 YLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNL 368
           Y+  L HY G LP++   Y SSE + G N+ P   P   ++ ++PN+GYFEF+P    + 
Sbjct: 337 YIPTLEHYGGGLPMVCTMYASSECYFGLNLRPLCDPAEVSYTIMPNMGYFEFLPVDADSD 396

Query: 369 ESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
             + L      V L  V+ G EYE+++T  A
Sbjct: 397 ADEQL------VDLARVEAGREYELVITTYA 421


>gi|449448278|ref|XP_004141893.1| PREDICTED: probable indole-3-acetic acid-amido synthetase
           GH3.1-like [Cucumis sativus]
          Length = 607

 Score =  275 bits (702), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 148/387 (38%), Positives = 221/387 (57%), Gaps = 7/387 (1%)

Query: 18  ETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQR 77
           E  T + + +Q+  L +IL +NA  EY+    LNG TD ++FKS  P+VT+EDLQP IQR
Sbjct: 29  EETTTNTDSVQQRVLAEILTQNAHTEYVNRFRLNGATDRDTFKSKFPVVTYEDLQPDIQR 88

Query: 78  IIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP-I 136
           I +GD SPI +  PI+    SSGT+ G+ K +P   E ME    ++       N   P +
Sbjct: 89  IANGDRSPIFSSHPISEFLTSSGTSAGERKLMPTIKEEMERRQLLYSLLMPIMNLYVPGL 148

Query: 137 GKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFH 196
            KGK L F++   ++KT GGL A    T+ Y+S  FK       +   SP+E +   D  
Sbjct: 149 DKGKGLYFLFVKAETKTPGGLVARPVLTSYYKSDIFKTRHYDPFNDYTSPNEAVLCADSF 208

Query: 197 QSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPSI 256
           QS+Y  +LCGL+ R+++  V + FA  L+ A R  +L W++L  DI  G L+ +IT   +
Sbjct: 209 QSMYTQMLCGLLMRDQVLRVGAVFASGLLRAIRFLQLNWKQLAHDISTGTLNPKITDTCL 268

Query: 257 RAAMSK--ILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLR 314
           R  ++   +  P PELA+ I  +C     W G+I  ++PN KYL  I+TG+M  Y+  L 
Sbjct: 269 RECITSKYLTNPKPELAEFISSECCT-EEWEGIITRIWPNTKYLDVIVTGAMAQYIPTLE 327

Query: 315 HYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLC 374
            Y+G LP+    Y SSE + G N+NP   P   T+ ++PN+GYFEF+P    +  +  L 
Sbjct: 328 FYSGGLPMACTMYASSECYFGVNLNPMCKPSDVTYTIMPNMGYFEFLPHD-SSSRAPALS 386

Query: 375 IE--PKPVGLTEVKVGEEYEIIVTNVA 399
            +  P+ V L +V+VG+EYE+++T  A
Sbjct: 387 RDSPPRLVDLADVEVGKEYELVITTYA 413


>gi|326500950|dbj|BAJ95141.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 617

 Score =  274 bits (701), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 143/386 (37%), Positives = 220/386 (56%), Gaps = 7/386 (1%)

Query: 17  FETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQ 76
            + +T + + +Q   L +IL  N   EYL+N GL+G  D ++F++ VP+V+++ LQPYIQ
Sbjct: 41  IDEMTCNVDSVQERVLAEILARNVDTEYLKNCGLDGAADRDTFRAKVPVVSYDALQPYIQ 100

Query: 77  RIIDGDISPILTGKPITTISRSSGTTQGKPKFLP-FNDELMETTLQIFRTSYAFRNREFP 135
           RI++GD SPIL+  P++    SSGT+ G+ K +P   DEL    L ++       N    
Sbjct: 101 RIVNGDRSPILSTHPVSEFLTSSGTSAGERKLMPTIKDELDRRQL-LYSLLMPVMNLYLS 159

Query: 136 -IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPD 194
            + KGK L F++   ++KT  GL A    T+ Y+S  FK           SP   I   D
Sbjct: 160 GLDKGKGLYFLFVKSETKTPSGLTARPVLTSYYKSEQFKNRPYDPYHNYTSPTAAILCAD 219

Query: 195 FHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVP 254
             +S+Y  ++CGL  R E+  V + FA  L+ A R  +L WEEL  DI  G L+ R+T  
Sbjct: 220 AFESMYAQMVCGLCQRHEVLRVGAVFASGLLRAIRFLQLNWEELAADIEAGALTPRVTDA 279

Query: 255 SIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLR 314
           S+R A++ IL+P+PELA  +  +C    +W G++  ++PN KYL  I+TG+M  Y+  L+
Sbjct: 280 SVREAVAGILRPDPELAQFVRDECCK-GDWAGIVRRIWPNTKYLDVIVTGAMAQYIGTLK 338

Query: 315 HYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLC 374
           +Y+GDLP+    Y SSE + G N+ P   P   ++ ++PN+GYFEF+P  +        C
Sbjct: 339 YYSGDLPMACTMYASSECYFGLNLRPLCDPSEVSYTIMPNMGYFEFLP--VDEATGAASC 396

Query: 375 IEP-KPVGLTEVKVGEEYEIIVTNVA 399
           ++    V L  V+ G EYE+++T  A
Sbjct: 397 VDAGNLVDLARVEAGREYELVITTYA 422


>gi|197209754|dbj|BAG68923.1| IAA-amido synthetase [Arabidopsis thaliana]
          Length = 597

 Score =  274 bits (701), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 156/388 (40%), Positives = 225/388 (57%), Gaps = 14/388 (3%)

Query: 17  FETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQ 76
            E +TK+ + +Q + L +IL  N++ EYL+   LNG  D ++FKS VP+V +EDL+  IQ
Sbjct: 27  IEEMTKNPDSVQEKVLGEILSRNSNTEYLKRFDLNGAVDRKTFKSKVPVVIYEDLKTDIQ 86

Query: 77  RIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP- 135
           RI +GD SPIL+  PIT    SSGT+ G+ K +P  +E +     +        N   P 
Sbjct: 87  RISNGDRSPILSSHPITEFLTSSGTSAGERKLMPTIEEDINRRQLLGNLLMPVMNLYVPG 146

Query: 136 IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDF 195
           + KGK L F++   +SKT GGL A  A T+ Y+S  F+       S   SP E I   D 
Sbjct: 147 LDKGKGLYFLFVKSESKTSGGLPARPALTSYYKSDYFRT--SDSDSVYTSPKEAILCSDS 204

Query: 196 HQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPS 255
            QS+Y  +LCGL+ R E+  + + F   L+ A    +  W+EL  DI  G LSS+I  P+
Sbjct: 205 SQSMYTQMLCGLLMRHEVNRLGAVFPSGLLRAISFLQNNWKELSQDISTGTLSSKIFDPA 264

Query: 256 IRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLR 314
           I+  MSKIL KP+ ELA+ +   CS L NW G+I +++PN KYL  I+TG+M  Y+  L 
Sbjct: 265 IKNRMSKILTKPDQELAEFLIGVCS-LENWEGIITKIWPNTKYLDVIVTGAMAQYIPMLE 323

Query: 315 HYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRL---GNLESQ 371
           +Y+G LP+ S  Y SSE + G N+NP   P   ++ + PN+ YFEF+P      G +E+ 
Sbjct: 324 YYSGGLPMASTIYASSESYFGINLNPMCKPSEPSYTIFPNMAYFEFLPHNHDGDGGVEAT 383

Query: 372 VLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
            L      V L +V+VG+EYE+++T  A
Sbjct: 384 SL------VELADVEVGKEYELVITTYA 405


>gi|115440131|ref|NP_001044345.1| Os01g0764800 [Oryza sativa Japonica Group]
 gi|82592858|sp|P0C0M2.1|GH32_ORYSJ RecName: Full=Probable indole-3-acetic acid-amido synthetase GH3.2;
           AltName: Full=Auxin-responsive GH3-like protein 2;
           Short=OsGH3-2
 gi|113533876|dbj|BAF06259.1| Os01g0764800 [Oryza sativa Japonica Group]
 gi|125527825|gb|EAY75939.1| hypothetical protein OsI_03857 [Oryza sativa Indica Group]
          Length = 614

 Score =  274 bits (701), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 149/390 (38%), Positives = 222/390 (56%), Gaps = 3/390 (0%)

Query: 12  ELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDL 71
           E +E  E +T+  + +Q   L  IL  N  AEYL+  G+ GRTD E+FK+ VP+VT+EDL
Sbjct: 31  EKLEFIEEMTRGFDAVQERVLAAILARNNGAEYLRRHGMEGRTDREAFKARVPVVTYEDL 90

Query: 72  QPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRN 131
           +P I+RI +GD S I++  PIT    SSGT+ G+ K +P  ++ ++    ++       N
Sbjct: 91  RPEIERIANGDRSNIISSHPITEFLTSSGTSAGERKLMPTIEDELDRRQMLYSLLMPVMN 150

Query: 132 REFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVI 190
              P + KGK L F++   ++KT GGL A    T+ Y+S  FK       +   SP   I
Sbjct: 151 LYVPGLDKGKGLYFLFIKSETKTPGGLPARPVLTSYYKSDHFKHRPFDPYNVYTSPTAAI 210

Query: 191 FGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSR 250
              D  QS+Y  +LCGL+ R E+  V + FA  L+ A R  +L W EL  DIR G LS++
Sbjct: 211 LCTDAFQSMYAQMLCGLVARAEVLRVGAVFASGLLRAIRFLQLHWRELAHDIRTGTLSAK 270

Query: 251 ITVPSIRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHY 309
           +T PSIR A++++L  P+ ELA  +  +C G   W G+I  ++PN KYL  I+TG+M  Y
Sbjct: 271 VTEPSIRDAVAEVLAAPDAELAAFVEAEC-GKDKWEGIITRMWPNTKYLDVIVTGAMAQY 329

Query: 310 LKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLE 369
           +  L+ Y+G LP+    Y SSE + G N+ P   P   ++ ++PN+GYFE +P       
Sbjct: 330 IPTLKFYSGGLPMACTMYASSECYFGLNLRPMCDPSEVSYTIMPNMGYFELMPHDPDAPP 389

Query: 370 SQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
                  P+ V L + +VG EYE+++T  A
Sbjct: 390 LPRDAPPPRLVDLADAEVGREYELVITTYA 419


>gi|449511016|ref|XP_004163839.1| PREDICTED: probable indole-3-acetic acid-amido synthetase
           GH3.1-like [Cucumis sativus]
          Length = 607

 Score =  274 bits (700), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 148/387 (38%), Positives = 221/387 (57%), Gaps = 7/387 (1%)

Query: 18  ETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQR 77
           E  T + + +Q+  L +IL +NA  EY+    LNG TD ++FKS  P+VT+EDLQP IQR
Sbjct: 29  EETTTNTDSVQQRVLAEILTQNAHTEYVNRFRLNGATDRDTFKSKFPVVTYEDLQPDIQR 88

Query: 78  IIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP-I 136
           I +GD SPI +  PI+    SSGT+ G+ K +P   E ME    ++       N   P +
Sbjct: 89  IANGDRSPIFSSHPISEFLTSSGTSAGERKLMPTIKEEMERRQLLYSLLMPIMNLYVPGL 148

Query: 137 GKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFH 196
            KGK L F++   ++KT GGL A    T+ Y+S  FK       +   SP+E +   D  
Sbjct: 149 DKGKGLYFLFVKAETKTPGGLVARPVLTSYYKSDIFKTRPYDPFNDYTSPNEAVLCADSF 208

Query: 197 QSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPSI 256
           QS+Y  +LCGL+ R+++  V + FA  L+ A R  +L W++L  DI  G L+ +IT   +
Sbjct: 209 QSMYTQMLCGLLMRDQVLRVGAVFASGLLRAIRFLQLNWKQLAHDISTGTLNPKITDTCL 268

Query: 257 RAAMSK--ILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLR 314
           R  ++   +  P PELA+ I  +C     W G+I  ++PN KYL  I+TG+M  Y+  L 
Sbjct: 269 RECITSKYLTNPKPELAEFISSECCT-EEWEGIITRIWPNTKYLDVIVTGAMAQYIPTLE 327

Query: 315 HYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLC 374
            Y+G LP+    Y SSE + G N+NP   P   T+ ++PN+GYFEF+P    +  +  L 
Sbjct: 328 FYSGGLPMACTMYASSECYFGVNLNPMCKPSDVTYTIMPNMGYFEFLPHD-SSSRAPALS 386

Query: 375 IE--PKPVGLTEVKVGEEYEIIVTNVA 399
            +  P+ V L +V+VG+EYE+++T  A
Sbjct: 387 RDSPPRLVDLADVEVGKEYELVITTYA 413


>gi|224124694|ref|XP_002319398.1| GH3 family protein [Populus trichocarpa]
 gi|222857774|gb|EEE95321.1| GH3 family protein [Populus trichocarpa]
          Length = 608

 Score =  274 bits (700), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 150/396 (37%), Positives = 231/396 (58%), Gaps = 11/396 (2%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNG-RTDPESFKSCVPLVTHEDLQ 72
           ++  E +T++A+ +QR+ L +IL  NA+ EYLQ  GLNG + D E+FK  +P+V++EDL+
Sbjct: 19  LQFIEDVTRNADEVQRKVLAEILSRNANVEYLQRYGLNGNKADREAFKKVMPVVSYEDLK 78

Query: 73  PYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNR 132
           P I RI +GD S I+  +PI+    SSGT+ G+ K +P  +E +     ++       N+
Sbjct: 79  PDIDRIANGDTSQIICSQPISEFLTSSGTSAGERKLMPTIEEELGRRSLLYSLLMPVMNQ 138

Query: 133 EFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIF 191
             P + +GK + F++   ++KT GGL A    T+ Y+SS F+       +   SP+E I 
Sbjct: 139 FVPGLDRGKGMYFLFIKSETKTPGGLLARPVLTSYYKSSYFRDRPYDPYTNYTSPNETIL 198

Query: 192 GPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRI 251
             D +QS+Y  LLCGL    ++  V + FA   + A +  E  W  LC+DIR G +  +I
Sbjct: 199 CQDSYQSMYSQLLCGLYQNYDVLRVGAVFASGFIRAIKFLEKHWILLCNDIRNGTIDPKI 258

Query: 252 TVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLK 311
           + PS+R A+ KILKPN +LAD I  +C+  S W G+I  L+PN KY+  I+TG+M  Y+ 
Sbjct: 259 SDPSVREAVLKILKPNQKLADFIEAECTRES-WKGIITRLWPNTKYIDVIVTGTMSQYIP 317

Query: 312 KLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIP-QRLGNLES 370
            L +Y   LPL+   Y SSE + G N+NP   P   ++ ++P + YFEF+P  R   L +
Sbjct: 318 TLDYYCDGLPLVCTMYASSECYFGLNLNPLSKPSEVSYTLIPTMAYFEFLPVNRKNGLIN 377

Query: 371 QVLC-------IEPKPVGLTEVKVGEEYEIIVTNVA 399
            +          + + V L +VK+GEEYE++VT  A
Sbjct: 378 SITAPTSLDQKKDQELVDLVDVKLGEEYELVVTTYA 413


>gi|242040557|ref|XP_002467673.1| hypothetical protein SORBIDRAFT_01g032020 [Sorghum bicolor]
 gi|241921527|gb|EER94671.1| hypothetical protein SORBIDRAFT_01g032020 [Sorghum bicolor]
          Length = 623

 Score =  274 bits (700), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 150/395 (37%), Positives = 226/395 (57%), Gaps = 6/395 (1%)

Query: 9   DVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTH 68
           DV++L    E +T D + +Q   L +IL  NA  EYL   GL G T  ++F++ VP+VT+
Sbjct: 27  DVEKL-RFIEEMTSDVDAVQERVLAEILARNARTEYLARCGLAGATGRDAFRARVPVVTY 85

Query: 69  EDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYA 128
           EDLQP IQRI +GD SPIL+  PI+    SSGT+ G+ K +P   E ++    ++     
Sbjct: 86  EDLQPDIQRIANGDRSPILSAHPISEFLTSSGTSAGERKLMPTIKEELDRRQLLYSLLMP 145

Query: 129 FRNREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPD 187
             N+  P + KGKAL F++   ++ T GGL A    T+ Y+S  FK           SP 
Sbjct: 146 VMNQYVPGLDKGKALYFLFVKSETTTPGGLTARPVLTSYYKSEHFKNRPFDPYHDYTSPT 205

Query: 188 EVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVL 247
             I   D  QS+Y  +LCGL  R ++  V + FA  L+ A R  +L WE+L DDI  G L
Sbjct: 206 AAILCADAFQSMYAQMLCGLCQRHDVLRVGAVFASGLLRAIRFLQLHWEQLADDIGSGSL 265

Query: 248 SSRITVPSIRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSM 306
           + R+  PS+R A++ IL +P+P+LA  +  +CS   +W G++  ++PN +YL  I+TG+M
Sbjct: 266 NPRVADPSVRDAVADILRRPDPDLARFVRAECS-RGDWAGIVTRVWPNTRYLDVIVTGAM 324

Query: 307 EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIP--QR 364
           + Y+  L++Y+G LP+    Y SSE + G N+ P   PE   + ++PN+GYFEF+P  + 
Sbjct: 325 QQYIPTLQYYSGGLPMACTMYASSECYFGLNLRPMCRPEEVCYTIMPNMGYFEFLPVDEA 384

Query: 365 LGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
            G   +       + V L  V+ G EYE+++T  A
Sbjct: 385 SGVPAASGDAAARQLVDLAGVEQGREYELVITTYA 419


>gi|218199891|gb|EEC82318.1| hypothetical protein OsI_26596 [Oryza sativa Indica Group]
          Length = 628

 Score =  273 bits (698), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 149/402 (37%), Positives = 233/402 (57%), Gaps = 33/402 (8%)

Query: 9   DVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLN-GRTDPESFKSCVPLVT 67
           DV++L    E +T D + +Q   L +IL  NA AEYL   GL+ G T   +F++ VP+V+
Sbjct: 26  DVEKL-RLIEELTSDVDAVQERVLSEILGRNAGAEYLTRCGLDAGDTGRATFRAKVPVVS 84

Query: 68  HEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLP--FNDE--------LME 117
           ++DL+PYIQR+ DGD SP+L+  PIT    S+GT+ G+ K +P   +D         L+ 
Sbjct: 85  YDDLKPYIQRVADGDCSPVLSTHPITEFLTSTGTSAGECKLIPVAMDDSGRRQALHGLIG 144

Query: 118 TTLQIFRTSYAFRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMK 177
             L+++            + KGK L F++   ++KT+GGL A  A T+VY+S  FK+   
Sbjct: 145 PVLKLYVPG---------LEKGKGLNFMFVKSETKTRGGLTAWFALTSVYKSKQFKS--- 192

Query: 178 AMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEE 237
            M +   SP   I   D  QS+Y  ++CGL  R ++  V + FA +LV A R  +L W +
Sbjct: 193 -MANAYTSPTAAILCEDAFQSMYAQMVCGLCQRHDVVRVGAVFAAALVRAIRFLQLNWGQ 251

Query: 238 LCDDIREGVLSSRITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKY 297
           L  DI  G L   +  PS+R A+S IL+P+ ELA+ +  +CS   +W G+I  ++PN KY
Sbjct: 252 LAADIEAGELGPHVADPSVREAVSGILRPDAELAEFVRIECSK-GDWAGIITRIWPNTKY 310

Query: 298 LSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGY 357
           +  I+TG+M  Y++ L++Y+G LP++S  Y SSE + G N+ P   P   ++ ++PN+ Y
Sbjct: 311 VDAIVTGAMAQYIRTLQYYSGGLPIVSTSYASSECFFGINLRPMCDPSEVSYTIMPNMAY 370

Query: 358 FEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
           FEF+P  +G +      ++     L  V+VG EYE+++T  A
Sbjct: 371 FEFLP--VGEVVDATNLVD-----LARVEVGREYEVVITTYA 405


>gi|70561314|emb|CAJ14972.1| auxin-induced GH3 protein [Pinus pinaster]
          Length = 615

 Score =  271 bits (693), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 156/389 (40%), Positives = 223/389 (57%), Gaps = 10/389 (2%)

Query: 17  FETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQ 76
            E  T  A  +Q E L +IL  NA  EYL+   L GRTD +SFK  +P++T+EDLQP I 
Sbjct: 32  IEHATIHAAEVQAEVLLEILTRNAYTEYLERYQLTGRTDRKSFKERLPVITYEDLQPEIL 91

Query: 77  RIIDGDISPILTGKPITTISRSSGTTQGKPKFLP-FNDELMETTLQIFRTSYAFRNREFP 135
           RI +GD+SPIL+  PI+    SSGT+ G+ K +P  ++EL   TL ++       N+   
Sbjct: 92  RIANGDMSPILSAHPISEFLTSSGTSAGERKIMPTIHEELKRRTL-LYSLLMPVMNQYMK 150

Query: 136 -IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPD 194
            + KGK + F++   +++T GGL A    T+ Y+S  F        +   SP E I   D
Sbjct: 151 GLDKGKGMYFLFVKSETRTPGGLLARPVLTSYYKSQDFIERPYDPYNVYTSPMEAILCSD 210

Query: 195 FHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSS-RITV 253
            +QS+YC LLCGL    E+  V + FA  L+ A R  E  W+ LC DIR G ++   +T 
Sbjct: 211 SYQSMYCQLLCGLAQNHEVLRVGAVFASGLLRAIRFLEEHWQSLCQDIRSGTVNDEEVTD 270

Query: 254 PSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKL 313
           P +R ++ KIL PN +LADLI  +CS  S W G+I  L+PNA+YL  I+TG+M  Y+K L
Sbjct: 271 PCLRESVMKILHPNTQLADLIRTECSKES-WQGIITRLWPNARYLDVIVTGAMAQYIKTL 329

Query: 314 RHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQ-- 371
             Y+G LP +   Y SSE + G N+ P   P   ++ ++PN+ +FEF+P      E    
Sbjct: 330 DFYSGGLPQVCTMYASSECYFGINLKPLCQPWEVSYTLMPNMAFFEFLPVYRNKNEDAGP 389

Query: 372 VLCIEPKP---VGLTEVKVGEEYEIIVTN 397
           V     +P   V L +VKVG+EYE+++T 
Sbjct: 390 VTTATEQPAELVDLVDVKVGQEYELVITT 418


>gi|225425302|ref|XP_002268278.1| PREDICTED: indole-3-acetic acid-amido synthetase GH3.17-like [Vitis
           vinifera]
          Length = 607

 Score =  271 bits (692), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 155/395 (39%), Positives = 228/395 (57%), Gaps = 17/395 (4%)

Query: 17  FETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQ 76
            E +T +A ++Q E L +IL +NA+ EYL+   L+G +D   FK  VP+V +ED++P+I+
Sbjct: 17  LEDLTTNANQVQLEVLEEILTQNANTEYLRGY-LDGHSDKGLFKKKVPIVNYEDIKPHIE 75

Query: 77  RIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP- 135
           RI +G+ S I++ +PIT +  SSGT+ G+PK +P   E ++     +       N+    
Sbjct: 76  RIANGEPSRIISAQPITELLTSSGTSGGQPKLMPSTAEDLDRKTFFYNLLIPVMNKYVDG 135

Query: 136 IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDF 195
           + +GK +  ++   +  T  GL A    T+ Y+SS F+       +   SPDE I   D 
Sbjct: 136 LDQGKGMYLLFIKPEISTPSGLMARPVLTSYYKSSNFRNRPFNPFNVYTSPDETILCLDS 195

Query: 196 HQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPS 255
            QS+YC LLCGL+ R+E+  V + FA + + A +  E  W ELC +IR G +S  IT PS
Sbjct: 196 KQSMYCQLLCGLVQRDEVLRVGAVFASAFLRAIKFLEDHWRELCSNIRTGCVSDWITDPS 255

Query: 256 IRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLR 314
            R A+S  L KP P+LAD I  +C+G S W G+I  L+P  KY+  I+TGSM  Y+  L 
Sbjct: 256 CRNAVSSFLSKPQPDLADFIEFECNGES-WEGIIKRLWPRTKYIEVIVTGSMAQYIPTLE 314

Query: 315 HYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLE--SQV 372
            Y+G LPL+S  Y SSE + G N+ P   P   ++ +LPN+ YFEF+P +  N E   QV
Sbjct: 315 FYSGGLPLVSTMYASSECYYGINLKPLSKPSDVSYTLLPNMAYFEFLPVQKNNGEVTQQV 374

Query: 373 LC-----------IEPKPVGLTEVKVGEEYEIIVT 396
            C           +E + VGL +VKVG  YE++VT
Sbjct: 375 QCNGGCIKKEGERVEIEVVGLVDVKVGHYYELVVT 409


>gi|242054503|ref|XP_002456397.1| hypothetical protein SORBIDRAFT_03g035500 [Sorghum bicolor]
 gi|241928372|gb|EES01517.1| hypothetical protein SORBIDRAFT_03g035500 [Sorghum bicolor]
          Length = 613

 Score =  270 bits (690), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 152/400 (38%), Positives = 230/400 (57%), Gaps = 11/400 (2%)

Query: 9   DVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTH 68
           DV++L E  E  TK+ +  Q   L +IL  N  AEYL+  G+ GRTD ++FK+ VP+VT+
Sbjct: 27  DVEKL-EFIEDKTKNFDAEQVRVLAEILARNNGAEYLRRHGMEGRTDRQAFKARVPVVTY 85

Query: 69  EDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYA 128
           EDL+P I RI +GD S I++  PIT    SSGT+ G+ K +P  ++ +     ++     
Sbjct: 86  EDLRPEIDRIANGDRSNIISSHPITEFLTSSGTSAGERKLMPTIEDELNRRQMLYSLLMP 145

Query: 129 FRNREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPD 187
             N   P + KGK L F++   ++KT GGL A    T+ Y+S  FK       +   SP 
Sbjct: 146 VMNLYVPGLDKGKGLYFLFIKSETKTPGGLPARPVLTSYYKSDHFKHRPYDPYNVYTSPT 205

Query: 188 EVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVL 247
             I   D  QS+Y  +LCGL+ R E+  V + FA  L+ A R  +L W+EL  D+R G L
Sbjct: 206 AAILCTDSFQSMYSQMLCGLVARTEVLRVGAVFASGLLRAIRFLQLHWKELAHDLRTGTL 265

Query: 248 SSRITVPSIRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSM 306
           S+R+  PSIR A++++L KP+  LADL+  +C G  NW G+I  ++PN KYL  I+TG+M
Sbjct: 266 SARVVEPSIRDAVAEVLTKPDAGLADLVEAEC-GKDNWEGIITRVWPNTKYLDVIVTGAM 324

Query: 307 EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQR-- 364
             Y+  L++Y+G LP+    Y SSE + G N+ P   P   ++ ++PN+GYFE +P    
Sbjct: 325 AQYIPTLKYYSGGLPMACTMYASSECYFGLNLRPMCDPSEVSYTIMPNMGYFELLPHDPE 384

Query: 365 -----LGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
                  +  +  +  +   V L + +VG+EYE+++T  A
Sbjct: 385 DKPAVSSSSAASAMDHDRLLVDLADAEVGKEYELVITTYA 424


>gi|115464735|ref|NP_001055967.1| Os05g0500900 [Oryza sativa Japonica Group]
 gi|75113903|sp|Q60EJ6.1|GH34_ORYSJ RecName: Full=Probable indole-3-acetic acid-amido synthetase GH3.4;
           AltName: Full=Auxin-responsive GH3-like protein 4;
           Short=OsGH3-4
 gi|53749366|gb|AAU90225.1| putative auxin-responsive protein GH3 [Oryza sativa Japonica Group]
 gi|113579518|dbj|BAF17881.1| Os05g0500900 [Oryza sativa Japonica Group]
 gi|125552879|gb|EAY98588.1| hypothetical protein OsI_20501 [Oryza sativa Indica Group]
 gi|222632129|gb|EEE64261.1| hypothetical protein OsJ_19094 [Oryza sativa Japonica Group]
          Length = 629

 Score =  269 bits (688), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 150/393 (38%), Positives = 222/393 (56%), Gaps = 10/393 (2%)

Query: 12  ELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRT--DPESFKSCVPLVTHE 69
           E +E  E +T++A + QR  L +IL +NA AEYL+ LG+ G      E+F+   PLVT+E
Sbjct: 25  EKLEHIERVTRNAGQEQRRVLEEILAQNAQAEYLRRLGVPGDAPGADEAFRRLAPLVTYE 84

Query: 70  DLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAF 129
           D+ P + RI +GD SPIL+GKP++    SSGT+ G+ K +P  +E ME    ++      
Sbjct: 85  DILPDVLRIANGDTSPILSGKPVSEFLTSSGTSGGERKLMPTIEEEMERRSGLYSLLMPV 144

Query: 130 RNREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDE 188
            +R+ P + KGKA+   +   + +T GGL A    T+ YRS  F        +   SPDE
Sbjct: 145 MSRQVPGLDKGKAMYLYFVKSEWRTPGGLPARPVLTSFYRSRYFLERPHDPYTVYTSPDE 204

Query: 189 VIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLS 248
            +   D +QS+Y  L+CGL+ R ++  V + FA   + A R  E  W  LC DIR G L 
Sbjct: 205 AVLCEDAYQSMYAQLICGLVHRADVLRVGAVFASGFLRAIRFLEKHWPSLCRDIRAGELD 264

Query: 249 SRITVPSIRAAMSKILK-PNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSME 307
             +T P++R A+ ++L+  +P LAD I  +C+  S W G+I  ++P+ KY+  I+TG+M 
Sbjct: 265 GGVTDPAVRGAVGRVLRGADPALADAIEAECARPS-WQGIIRRVWPSTKYIDVIVTGAMA 323

Query: 308 HYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGN 367
            Y+  L  Y G LPL    Y SSE + G N+NP   P    + ++P + YFEF+P   G 
Sbjct: 324 QYIPTLEFYGGGLPLACTMYASSECYFGLNLNPMCKPSEVAYTLIPTMCYFEFLPVNSG- 382

Query: 368 LESQVLCIEPKPVG---LTEVKVGEEYEIIVTN 397
             + V   EP   G   L +VK+G EYE++VT 
Sbjct: 383 -ANDVAAPEPDHRGLVDLVDVKLGHEYELVVTT 414


>gi|414880196|tpg|DAA57327.1| TPA: hypothetical protein ZEAMMB73_719431 [Zea mays]
          Length = 644

 Score =  268 bits (686), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 156/394 (39%), Positives = 226/394 (57%), Gaps = 15/394 (3%)

Query: 12  ELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGL-NGRTDP-ESFKSCVPLVTHE 69
           E +E  E +T +A ++QR  L +IL +NA AEYL+  G+  G  D  E+F+  VPLVT+E
Sbjct: 23  EALEFIEHVTANAGKVQRRVLAEILSQNAPAEYLRRYGVPGGSADAVEAFRRVVPLVTYE 82

Query: 70  DLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLP-FNDELMETTLQIFRTSYA 128
            LQP I RI +GD SPIL+GKPI+    SSGT+ G+ K +P   DEL   +L ++     
Sbjct: 83  GLQPDILRIANGDASPILSGKPISEFLTSSGTSGGERKLMPTIADELDRRSL-LYSLQMP 141

Query: 129 FRNREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPD 187
             ++  P + KGKA+  ++   +S+T GGL A    T+ YRS  F        ++  SP+
Sbjct: 142 VMSQSVPGLDKGKAMYLLFVKAESRTPGGLVARPVLTSYYRSRQFLERPHDPYTEYTSPN 201

Query: 188 EVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVL 247
           E I   D +QS+Y  LLCGL+ R ++  V + FA   + A R  E  W  LC DIR G L
Sbjct: 202 EAILCVDSYQSMYAQLLCGLVHRADVLRVGAVFASGFLRAIRFLEKHWPRLCRDIRTGTL 261

Query: 248 SSRITVPSIRAAMSKILK-PNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSM 306
              IT  ++R A++++L+  +P LAD I   C G S+W  +I  L+P  +Y+  I+TG+M
Sbjct: 262 DPEITDRAVRDAVARVLRGADPALADEIEAVCGG-SSWESIIRRLWPRTRYVDVIVTGAM 320

Query: 307 EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLG 366
             Y+  L  Y G LPL    Y SSE + G N+NP   P    + ++P + YFEF+P +  
Sbjct: 321 SQYIPTLEFYGGGLPLACTMYASSECYFGLNLNPMCKPGDVAYTLIPTMCYFEFLPLQCS 380

Query: 367 NLESQVLCIEPKP---VGLTEVKVGEEYEIIVTN 397
           N ++     EP     VGL +VK+G EYE++VT 
Sbjct: 381 NGKA-----EPSHRDLVGLVDVKLGHEYELVVTT 409


>gi|15240601|ref|NP_196836.1| auxin-responsive GH3 family protein [Arabidopsis thaliana]
 gi|75181119|sp|Q9LYU4.1|GH312_ARATH RecName: Full=4-substituted benzoates-glutamate ligase GH3.12;
           AltName: Full=Auxin-responsive GH3-like protein 12;
           Short=AtGH3-12; AltName: Full=Protein GH3-LIKE DEFENSE
           GENE 1; AltName: Full=Protein GRETCHEN HAGEN 3.12;
           AltName: Full=Protein HOPW1-1-INTERACTING 3; AltName:
           Full=Protein avrPPHB SUSCEPTIBLE 3
 gi|7529287|emb|CAB86639.1| auxin-responsive-like protein [Arabidopsis thaliana]
 gi|158939880|gb|ABW84226.1| auxin-responsive GH3 family protein [Arabidopsis thaliana]
 gi|332004497|gb|AED91880.1| auxin-responsive GH3 family protein [Arabidopsis thaliana]
          Length = 575

 Score =  268 bits (686), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 147/394 (37%), Positives = 228/394 (57%), Gaps = 13/394 (3%)

Query: 9   DVDELIE-EFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVT 67
           D++E  E + + +T + + IQ   L +I+  N   EYLQ   L  R D E FK  VP+V+
Sbjct: 6   DINETFEKQLKDLTSNVKSIQDNLLEEIITPNTKTEYLQRF-LIDRFDKELFKKNVPIVS 64

Query: 68  HEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSY 127
           +ED++PY+ R+++G+ S +++ + IT    SSGT+ G  K +P+N++ ++    I+    
Sbjct: 65  YEDIKPYLDRVVNGESSDVISARTITGFLLSSGTSGGAQKMMPWNNKYLDNLTFIYDLRM 124

Query: 128 AFRNREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSP 186
               +    + +GK + F++  ++S T  GL A  AT++ ++S  FK           SP
Sbjct: 125 QVITKHVKGVEEGKGMMFLFTKQESMTPSGLPARVATSSYFKSDYFKNRPSNWYYSYTSP 184

Query: 187 DEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGV 246
           DEVI  P+  +SLYCHLLCGL+ R+E+    S FA  +V A    +  WEELC +IR G 
Sbjct: 185 DEVILCPNNTESLYCHLLCGLVQRDEVVRTGSIFASVMVRAIEVLKNSWEELCSNIRSGH 244

Query: 247 LSSRITVPSIRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGS 305
           LS+ +T    + ++S +L  P PELAD I + C+  ++W G++  L+PN KY+  ++TGS
Sbjct: 245 LSNWVTDLGCQNSVSLVLGGPRPELADTIEEICNQ-NSWKGIVKRLWPNTKYIETVVTGS 303

Query: 306 MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRL 365
           M  Y+  L +Y  DLPL+S  YGSSE   G N++P   PE  ++  +PN+ YFEFIP   
Sbjct: 304 MGQYVPMLNYYCNDLPLVSTTYGSSETTFGINLDPLCKPEDVSYTFMPNMSYFEFIPMDG 363

Query: 366 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
           G+        +   V L +VK+G  YE +VTN A
Sbjct: 364 GD--------KNDVVDLEDVKLGCTYEPVVTNFA 389


>gi|390981208|pdb|4EWV|A Chain A, Crystal Structure Of Gh3.12 In Complex With Ampcpp
 gi|390981209|pdb|4EWV|B Chain B, Crystal Structure Of Gh3.12 In Complex With Ampcpp
 gi|392311802|pdb|4EPM|A Chain A, Crystal Structure Of Arabidopsis Gh3.12 (Pbs3) In Complex
           With Amp
 gi|392311807|pdb|4EQL|A Chain A, Crystal Structure Of Gh3.12 In Complex With Amp And
           Salicylate
 gi|392311808|pdb|4EQL|B Chain B, Crystal Structure Of Gh3.12 In Complex With Amp And
           Salicylate
          Length = 581

 Score =  268 bits (686), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 147/394 (37%), Positives = 228/394 (57%), Gaps = 13/394 (3%)

Query: 9   DVDELIE-EFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVT 67
           D++E  E + + +T + + IQ   L +I+  N   EYLQ   L  R D E FK  VP+V+
Sbjct: 12  DINETFEKQLKDLTSNVKSIQDNLLEEIITPNTKTEYLQRF-LIDRFDKELFKKNVPIVS 70

Query: 68  HEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSY 127
           +ED++PY+ R+++G+ S +++ + IT    SSGT+ G  K +P+N++ ++    I+    
Sbjct: 71  YEDIKPYLDRVVNGESSDVISARTITGFLLSSGTSGGAQKMMPWNNKYLDNLTFIYDLRM 130

Query: 128 AFRNREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSP 186
               +    + +GK + F++  ++S T  GL A  AT++ ++S  FK           SP
Sbjct: 131 QVITKHVKGVEEGKGMMFLFTKQESMTPSGLPARVATSSYFKSDYFKNRPSNWYYSYTSP 190

Query: 187 DEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGV 246
           DEVI  P+  +SLYCHLLCGL+ R+E+    S FA  +V A    +  WEELC +IR G 
Sbjct: 191 DEVILCPNNTESLYCHLLCGLVQRDEVVRTGSIFASVMVRAIEVLKNSWEELCSNIRSGH 250

Query: 247 LSSRITVPSIRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGS 305
           LS+ +T    + ++S +L  P PELAD I + C+  ++W G++  L+PN KY+  ++TGS
Sbjct: 251 LSNWVTDLGCQNSVSLVLGGPRPELADTIEEICNQ-NSWKGIVKRLWPNTKYIETVVTGS 309

Query: 306 MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRL 365
           M  Y+  L +Y  DLPL+S  YGSSE   G N++P   PE  ++  +PN+ YFEFIP   
Sbjct: 310 MGQYVPMLNYYCNDLPLVSTTYGSSETTFGINLDPLCKPEDVSYTFMPNMSYFEFIPMDG 369

Query: 366 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
           G+        +   V L +VK+G  YE +VTN A
Sbjct: 370 GD--------KNDVVDLEDVKLGCTYEPVVTNFA 395


>gi|302766585|ref|XP_002966713.1| hypothetical protein SELMODRAFT_85812 [Selaginella moellendorffii]
 gi|300166133|gb|EFJ32740.1| hypothetical protein SELMODRAFT_85812 [Selaginella moellendorffii]
          Length = 575

 Score =  268 bits (685), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 163/385 (42%), Positives = 221/385 (57%), Gaps = 10/385 (2%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           ++  E  TK+A  IQRE L++ILE+NA  EYL   GL+  ++       +PLV + D++ 
Sbjct: 6   LKSMEHATKNAAVIQRELLQQILEKNAGTEYLTRHGLDEESNLVDGFHKLPLVEYNDIEA 65

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNRE 133
            I+RI DGD   IL   PI+    SSGTT G+ K +P   E      +    S A+ +R 
Sbjct: 66  DIKRIADGDTGRILCSDPISQFFISSGTTTGRSKLIPVTKEANSRFFRPPLISPAW-HRV 124

Query: 134 FPIGKGKA-LQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFG 192
           F I   +  L F + SKQS TKGG  A T TT+   S+ FK    +      +P ++   
Sbjct: 125 FTINPDETYLAFWFASKQSLTKGGFKAETVTTSGLNSAHFKRAAASF----VTPHKIFQS 180

Query: 193 PDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRIT 252
              +Q LYCHLLCGL+ REE+ +V S FA +L  AFR  E VW EL +DI  G LSSRIT
Sbjct: 181 TSMYQCLYCHLLCGLLRREEVTVVISAFAFALTEAFRVLEQVWSELLEDIEAGSLSSRIT 240

Query: 253 VPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKK 312
            P +R AMS I  P+PELA+ + ++    S   G++  L+PNAK +  + TG+M  Y  +
Sbjct: 241 DPILRLAMSGIAPPSPELAEQLRREFRSFS-MDGIVQRLWPNAKSVVAVTTGAMAPYAPR 299

Query: 313 LRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQV 372
           LR  AG  PL+  +Y SSE  IG N++P+  P  ATF V P   YFEF+    G  +   
Sbjct: 300 LRALAGKTPLVCGNYFSSECLIGINLSPASSP--ATFTVNPEFAYFEFLSYHDGETKLNG 357

Query: 373 LCIEPKPVGLTEVKVGEEYEIIVTN 397
           L  E +PVGLTEV +GE+YEI+VT 
Sbjct: 358 L-EEQRPVGLTEVTIGEKYEIVVTT 381


>gi|147771741|emb|CAN78161.1| hypothetical protein VITISV_040921 [Vitis vinifera]
          Length = 676

 Score =  268 bits (685), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 153/395 (38%), Positives = 228/395 (57%), Gaps = 17/395 (4%)

Query: 17  FETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQ 76
            E +T +A ++Q E L +IL +NA+ EYL+   L+G +D   FK  VP+V +ED++P+I+
Sbjct: 21  LEDLTTNANQVQLEVLEEILTQNANTEYLRGY-LDGHSDKGLFKKKVPIVNYEDIKPHIE 79

Query: 77  RIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP- 135
           RI +G+ S I++ +PIT +  SSGT+ G+PK +P   E ++     +       N+    
Sbjct: 80  RIANGEPSRIISAQPITELLTSSGTSGGQPKLMPSTAEDLDRKTFFYNLLIPVMNKYVDG 139

Query: 136 IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDF 195
           + +GK +  ++   +  T  GL A    T+ Y+SS F+       +   SPDE I   D 
Sbjct: 140 LDQGKGMYLLFIKPEISTPSGLMARPVLTSYYKSSNFRNRPFNPFNVYTSPDETILCLDS 199

Query: 196 HQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPS 255
            QS+YC LLCGL+ R+E+  V + FA + + A +  E  W ELC +IR G +S  IT PS
Sbjct: 200 KQSMYCQLLCGLVQRDEVLRVGAVFASAFLRAIKFLEDHWRELCSNIRTGCVSDWITDPS 259

Query: 256 IRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLR 314
            R A+S  L KP P+LAD I  +C+G S W G+I +L+P  KY+  I+TGSM  Y+  L 
Sbjct: 260 CRNAVSSFLSKPQPDLADFIEFECNGES-WEGIIKKLWPRTKYIEVIVTGSMAQYIPTLE 318

Query: 315 HYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEF--IPQRLGNLESQV 372
            Y+G LPL+S  Y SSE + G N+ P   P   ++ +LPN+ YFEF  + +  G +  QV
Sbjct: 319 FYSGGLPLVSTMYASSECYYGINLKPLSKPSDVSYTLLPNMAYFEFLHVQKNNGEVTQQV 378

Query: 373 LC-----------IEPKPVGLTEVKVGEEYEIIVT 396
            C           +E + VGL +VKVG  YE++VT
Sbjct: 379 QCNGGCIKKEGERVEIEVVGLVDVKVGHYYELVVT 413


>gi|357482731|ref|XP_003611652.1| Indole-3-acetic acid-amido synthetase GH3.3 [Medicago truncatula]
 gi|355512987|gb|AES94610.1| Indole-3-acetic acid-amido synthetase GH3.3 [Medicago truncatula]
          Length = 818

 Score =  267 bits (683), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 161/400 (40%), Positives = 225/400 (56%), Gaps = 31/400 (7%)

Query: 1   MLEKMETVD---VDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPE 57
           +LE   +VD   ++  ++  E +TK+ +  Q   L +IL +NA  EYL   GLNG TD E
Sbjct: 8   LLEPPSSVDEKSLNNALDFIEEMTKNTDSNQERVLAEILAQNAETEYLNRFGLNGATDRE 67

Query: 58  SFKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
           +FKS V ++T+EDL P IQRI  GD SPIL   PI+    SSGT+ G+ K +P   + M+
Sbjct: 68  TFKSKVAVITYEDLIPDIQRIAKGDTSPILCAHPISEFLTSSGTSAGERKLMPTIHQEMD 127

Query: 118 TTLQIFRTSYAFRNREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEM 176
             L +        N+  P + KGKAL F++  K SK K  +       NV          
Sbjct: 128 RRLLLCSLITPVMNQYVPNLDKGKALHFLF-IKLSKQKQFMKRPFDPYNV---------- 176

Query: 177 KAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWE 236
                   SP+E I   D  QS+Y  +LCGLI R E+  V + FA  L+ A +  +L W 
Sbjct: 177 ------LTSPNEAISCLDSFQSMYTQMLCGLIMRHEVLRVGAIFASGLLRAIKFLQLNWA 230

Query: 237 ELCDDIREGVLSSRITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAK 296
           +L  DI  G L+ +IT PSI+  MSKILKP+PE A+ I K+CSG  NW  +IP ++PN K
Sbjct: 231 QLAHDISTGTLNPKITDPSIKECMSKILKPDPEQANFITKECSG-ENWERIIPRIWPNTK 289

Query: 297 YLSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIG 356
           YL  I+TG+M  Y+  L +Y+G+LP     Y SSE + G N+ P   P   ++ ++PN+G
Sbjct: 290 YLEVIVTGAMAQYIPTLDYYSGNLPKPCTIYASSECYFGLNLKPMTEPNEVSYTIMPNMG 349

Query: 357 YFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVT 396
           YFEF+P      ES      PK V L +V++G+ YE I+T
Sbjct: 350 YFEFLPLD----ES-----PPKLVDLVDVEIGKFYEFIIT 380


>gi|224072455|ref|XP_002303740.1| GH3 family protein [Populus trichocarpa]
 gi|222841172|gb|EEE78719.1| GH3 family protein [Populus trichocarpa]
          Length = 587

 Score =  266 bits (681), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 155/398 (38%), Positives = 230/398 (57%), Gaps = 4/398 (1%)

Query: 1   MLEKMETVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFK 60
           ML   +  D +  ++  E +T +A +IQR+ L  IL  N    YL++  LNG +  E+FK
Sbjct: 1   MLPIFDPNDNEAGLKLLEDLTNNACQIQRQVLEYILTTNLHTGYLKSF-LNGDSSKENFK 59

Query: 61  SCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTL 120
           + VP+V +ED++P I+RI +G+ S I++ +PIT +  SSGT+ G+PK +P   E +E   
Sbjct: 60  NKVPIVNYEDIKPCIERIANGEPSSIISAQPITELLTSSGTSGGQPKMMPSTAEELERKT 119

Query: 121 QIFRTSYAFRNREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAM 179
             +       N+    + +GK +  ++   +  T  GL A    T+ Y+SS F+      
Sbjct: 120 FFYNLLMPIMNKYVDGLDQGKGMYLLFTKPEISTPSGLMARPVLTSYYKSSNFRNRAFNR 179

Query: 180 QSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELC 239
            +   SPDE I  PD  QS+YC LLCGL+ REE+  V + FA + + A +  E   +ELC
Sbjct: 180 YNVYTSPDETILCPDSKQSMYCQLLCGLVQREEVLRVGAVFASAFLRAIKFLEEYQKELC 239

Query: 240 DDIREGVLSSRITVPSIRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFPNAKYL 298
            +IR G LS  IT P+ R A+S  L KPN ELADLI  +CSG S   G+I +L+P  KY+
Sbjct: 240 SNIRTGRLSDWITDPNCRNAVSSFLSKPNSELADLIEVECSGKS-CEGIIKKLWPRTKYI 298

Query: 299 SGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYF 358
             I+TGSM  Y+  L  Y+G LPL+S  YGSSE ++G N  P   P   ++ ++PN+ YF
Sbjct: 299 EVIVTGSMAQYIPTLEFYSGGLPLVSTMYGSSECYLGINFKPLSNPSDVSYTLIPNMAYF 358

Query: 359 EFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVT 396
           EF+P    N +      + + V L +VK+G  YE++VT
Sbjct: 359 EFLPVDKDNKKVIQAEKDVEAVDLEDVKLGHYYELVVT 396


>gi|115440375|ref|NP_001044467.1| Os01g0785400 [Oryza sativa Japonica Group]
 gi|75272534|sp|Q8LQM5.1|GH31_ORYSJ RecName: Full=Probable indole-3-acetic acid-amido synthetase GH3.1;
           AltName: Full=Auxin-responsive GH3-like protein 1;
           Short=OsGH3-1
 gi|20804910|dbj|BAB92590.1| putative auxin-regulated protein GH3 [Oryza sativa Japonica Group]
 gi|113533998|dbj|BAF06381.1| Os01g0785400 [Oryza sativa Japonica Group]
 gi|125572267|gb|EAZ13782.1| hypothetical protein OsJ_03707 [Oryza sativa Japonica Group]
 gi|215693284|dbj|BAG88666.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 610

 Score =  266 bits (681), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 149/388 (38%), Positives = 214/388 (55%), Gaps = 5/388 (1%)

Query: 12  ELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDP-ESFKSCVPLVTHED 70
           E +E  E +T +A ++QR  L +IL +NA AEYL+  G+ G  D  ++F+  VPLVT+E 
Sbjct: 22  EALEFIEHVTANAGQVQRRVLGEILAQNAPAEYLRRYGIPGSPDVVDAFRRLVPLVTYEG 81

Query: 71  LQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLP-FNDELMETTLQIFRTSYAF 129
           LQP I RI +GD SPI +GKPI+    SSGT+ G+ K +P   DE+   +L         
Sbjct: 82  LQPDILRIANGDTSPIFSGKPISEFLTSSGTSGGERKLMPTIADEMNRRSLLYSLLMPVM 141

Query: 130 RNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEV 189
                 + KGKA+  ++   +S+T GGL A    T+ YRS  F    +   +   SPDE 
Sbjct: 142 SQSVSGLDKGKAMYLLFVKAESRTPGGLAARPVLTSYYRSRQFLDRPRDPYTSYTSPDEA 201

Query: 190 IFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSS 249
           I   D +QS+Y  LLCGL+ R ++  V + FA   + A    E  W  LC DIR G L  
Sbjct: 202 ILCVDSYQSMYAQLLCGLVHRADVLRVGAVFASGFLRAIHFLEKHWARLCHDIRTGELDP 261

Query: 250 RITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHY 309
            IT   +R A+ ++L+ +P LAD I  +C+  S W G+I  L+P  KY+  I+TG+M  Y
Sbjct: 262 EITDRVVRDAVGRVLRADPALADAIEDECARAS-WEGIIRRLWPRTKYIDVIVTGTMSQY 320

Query: 310 LKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLE 369
           +  L  Y G LPL    Y SSE + G N+NP   P    + ++P + Y+EF+P    N  
Sbjct: 321 IPTLEFYGGGLPLTCTMYASSECYFGLNLNPMCKPSDVAYTLIPTMCYYEFLPVNCNNAT 380

Query: 370 SQVLCIEPKPVGLTEVKVGEEYEIIVTN 397
           ++        V L +VK+G EYE++VT 
Sbjct: 381 AEA--SHRDLVDLVDVKLGHEYELVVTT 406


>gi|15220661|ref|NP_173729.1| auxin-responsive GH3-like protein [Arabidopsis thaliana]
 gi|2829896|gb|AAC00604.1| highly similar to auxin-regulated protein GH3, gp|X60033|18591
           [Arabidopsis thaliana]
 gi|332192228|gb|AEE30349.1| auxin-responsive GH3-like protein [Arabidopsis thaliana]
          Length = 578

 Score =  266 bits (681), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 153/386 (39%), Positives = 221/386 (57%), Gaps = 14/386 (3%)

Query: 17  FETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQ 76
            E +T +  +IQ   L +IL  NA+  YLQ   L G  D ESFK  VP+VT+ED++PYI+
Sbjct: 18  LEDLTSNVTQIQDNVLEEILTLNANTNYLQKFFL-GSFDKESFKKNVPVVTYEDVKPYIE 76

Query: 77  RIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMET-TLQIFRTSYAFRNREFP 135
           R+++G+ S +++ +PIT    S+GT+ G  K +P+N++ ++  T       +   N    
Sbjct: 77  RVVNGEPSNVISARPITGFVLSTGTSGGAQKMMPWNEKYLDNLTFMYDLRMHIISNNVKD 136

Query: 136 IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDF 195
           + KGKA+ F +   +S T  GL A  A+++  +S+ FK           SPDEV   PD 
Sbjct: 137 VEKGKAMMFYFTKLESITPSGLPARVASSSYLKSNYFKNRPSNWYYSYTSPDEVTLCPDN 196

Query: 196 HQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPS 255
            Q+LYCHLLCGL+ R E+  + S FA  +V A +  E  WEELC +IR G LS  IT   
Sbjct: 197 KQNLYCHLLCGLVQRNEVTRMGSIFASVMVRAIKFLEDSWEELCSNIRSGQLSEWITDIG 256

Query: 256 IRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLR 314
            R ++S +L  P+PE AD I + C+    W G+I  L+P AKY+  I+TGSM  Y+  L 
Sbjct: 257 CRDSVSLVLGGPHPEAADTIEQICNQKC-WKGIITRLWPKAKYIETIVTGSMVQYVPTLN 315

Query: 315 HYAGD-LPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVL 373
           +Y+ + LPL+S  Y SSE   G N+NP   PE  ++  +PN+ YFEFIP         V 
Sbjct: 316 YYSNNMLPLISTIYASSETQFGLNLNPMCKPEDVSYTFMPNVSYFEFIP---------VD 366

Query: 374 CIEPKPVGLTEVKVGEEYEIIVTNVA 399
             +   V L +VK+G  YE +VTN +
Sbjct: 367 GDKNDVVDLADVKLGCCYEAVVTNFS 392


>gi|255543248|ref|XP_002512687.1| Indole-3-acetic acid-amido synthetase GH3.17, putative [Ricinus
           communis]
 gi|223548648|gb|EEF50139.1| Indole-3-acetic acid-amido synthetase GH3.17, putative [Ricinus
           communis]
          Length = 590

 Score =  266 bits (679), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 152/382 (39%), Positives = 219/382 (57%), Gaps = 6/382 (1%)

Query: 17  FETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQ 76
            E +T +A +IQ   L+ IL  NA  +YL +  L+G +D   FK  VP+V +ED++P I+
Sbjct: 17  LEELTTNACQIQDNVLQLILTNNAQTKYLSSF-LDGLSDKLDFKEKVPVVNYEDIRPCIE 75

Query: 77  RIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP- 135
            I +G  S I++ +PIT +  SSGT+ G+PK +P   E ++     +       N+    
Sbjct: 76  CIANGGSSSIISAQPITELLTSSGTSGGQPKMMPSTAEELDRKTFFYNLLVPVMNKYIDG 135

Query: 136 IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDF 195
           + +GK +  ++   +  T  GL A    T+ Y+SS F+       +   SPDE I  PD 
Sbjct: 136 LDQGKGMYLLFIKPEISTPSGLMARPVLTSYYKSSNFRNRPFNRYNVYTSPDETILCPDS 195

Query: 196 HQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPS 255
            QS+YC LLCGL+ R+E+  V + FA + + A +  E  W+ELC +IR G +S  I  PS
Sbjct: 196 KQSMYCQLLCGLVQRDEVLRVGAIFASAFLRAIKFLEDYWQELCSNIRTGCISDWIDDPS 255

Query: 256 IRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLR 314
            R A+S IL KPN ELADLI +KCS  S W G+I +L+P  K++  I+TGSM  Y+  L 
Sbjct: 256 CRNAVSSILKKPNSELADLIERKCSNKS-WEGIIKKLWPRTKFIEVIVTGSMAQYIPTLE 314

Query: 315 HYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLC 374
            Y+G LPL+S  Y SSE + G N  P   P   ++ +LPN+ YFEF+P   G    Q   
Sbjct: 315 FYSGGLPLVSTMYASSECYFGINFKPLSAPSDVSYTLLPNMAYFEFLPVERGYGAKQKKK 374

Query: 375 IEPKPVGLTEVKVGEEYEIIVT 396
           +E   V L +VKVG  YE++VT
Sbjct: 375 ME--TVDLVDVKVGHYYELVVT 394


>gi|15218026|ref|NP_176159.1| indole-3-acetic acid-amido synthetase GH3.4 [Arabidopsis thaliana]
 gi|62900333|sp|Q9LQ68.1|GH34_ARATH RecName: Full=Indole-3-acetic acid-amido synthetase GH3.4; AltName:
           Full=Auxin-responsive GH3-like protein 4; Short=AtGH3-4;
           AltName: Full=CF4-like protein
 gi|8778768|gb|AAF79776.1|AC009317_35 T30E16.2 [Arabidopsis thaliana]
 gi|14475953|gb|AAK62800.1|AC027036_21 auxin-regulated protein GH3, putative [Arabidopsis thaliana]
 gi|18146721|dbj|BAB82427.1| unnamed protein product [Arabidopsis thaliana]
 gi|332195458|gb|AEE33579.1| indole-3-acetic acid-amido synthetase GH3.4 [Arabidopsis thaliana]
          Length = 597

 Score =  265 bits (678), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 153/388 (39%), Positives = 221/388 (56%), Gaps = 14/388 (3%)

Query: 17  FETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQ 76
            E IT++ + +Q + L +IL  N++ EYL+   LNG  D +SFKS VP+V +EDL+  IQ
Sbjct: 27  IEEITRNPDSVQEKVLGEILSRNSNTEYLKRFDLNGAVDRKSFKSKVPVVIYEDLKTDIQ 86

Query: 77  RIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP- 135
           RI +GD SPIL+  PIT    SSGT+ G+ K +P  +E +     +        N   P 
Sbjct: 87  RISNGDRSPILSSHPITEFLTSSGTSAGERKLMPTIEEDINRRQLLGNLLMPVMNLYVPG 146

Query: 136 IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDF 195
           + KGK L F++   +S T GGL A  A T+ Y+S  F+       S   SP E I   D 
Sbjct: 147 LDKGKGLYFLFVKSESTTSGGLPARPALTSYYKSDYFRT--SDSDSVYTSPKEAILCCDS 204

Query: 196 HQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPS 255
            QS+Y  +LCGL+ R E+  + + F   L+ A    +  W+EL  DI  G LSS+I   +
Sbjct: 205 SQSMYTQMLCGLLMRHEVNRLGAVFPSGLLRAISFLQNNWKELSQDISTGTLSSKIFDHA 264

Query: 256 IRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLR 314
           I+  MS IL KP+ ELA+ +   CS   NW G+I +++PN KYL  I+TG+M  Y+  L 
Sbjct: 265 IKTRMSNILNKPDQELAEFLIGVCSQ-ENWEGIITKIWPNTKYLDVIVTGAMAEYIPMLE 323

Query: 315 HYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRL---GNLESQ 371
           +Y+G LP+ S  Y SSE + G N+NP   P   ++ + PN+ YFEF+P      G +E+ 
Sbjct: 324 YYSGGLPMASMIYASSESYFGINLNPMCKPSEVSYTIFPNMAYFEFLPHNHDGDGGVEAT 383

Query: 372 VLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
            L      V L +V+VG+EYE+++T  A
Sbjct: 384 SL------VELADVEVGKEYELVITTYA 405


>gi|449448480|ref|XP_004141994.1| PREDICTED: probable indole-3-acetic acid-amido synthetase
           GH3.1-like [Cucumis sativus]
 gi|449528118|ref|XP_004171053.1| PREDICTED: probable indole-3-acetic acid-amido synthetase
           GH3.1-like [Cucumis sativus]
          Length = 588

 Score =  265 bits (678), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 149/382 (39%), Positives = 220/382 (57%), Gaps = 9/382 (2%)

Query: 18  ETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQR 77
           E IT +A+ +Q++ L +IL  N+  EYL+   L+     + FKS V +VT+EDLQP IQR
Sbjct: 17  EEITTNADSVQQKVLAEILNRNSDTEYLKRFQLSRTASRDEFKSNVRVVTYEDLQPDIQR 76

Query: 78  IIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP-I 136
           I +GD SPI +  PI+    SSGT+ G+ K +P   E ME    ++       N+  P +
Sbjct: 77  IANGDRSPIFSSHPISEFLTSSGTSAGERKLMPTIKEEMERRQLLYSLLMPIMNKYVPGL 136

Query: 137 GKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFH 196
            KGK L F++   ++KT GGL A    T+ Y+S  FK       +   SP+E I   +  
Sbjct: 137 DKGKGLYFLFVKAETKTTGGLLARPVLTSYYKSDIFKTRPYDPFNDYTSPNEAILCANSF 196

Query: 197 QSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPSI 256
           QS+Y  +LCGL+ RE++  V + FA  L+ A    +  W++L  DI    L+ +IT P +
Sbjct: 197 QSMYTQMLCGLLMREQVLRVGAVFASGLLRAIHFLQHNWKQLAHDISTATLNPKITDPCL 256

Query: 257 RAAM-SKIL-KPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLR 314
           R  + SK L  PNPELA+LI K+CS    W G+I  ++PN KYL  I+TG+M  Y+  L 
Sbjct: 257 RECIVSKYLTNPNPELAELISKECST-EEWEGIITRIWPNTKYLDVIVTGAMAQYIPTLE 315

Query: 315 HYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLC 374
            Y+G LP+    Y SSE + G N+NP   P   T+ ++PN+ Y EFIP     L++ +  
Sbjct: 316 FYSGGLPMACTMYASSECYFGVNLNPMCKPSDVTYTIMPNMCYCEFIP-----LDNDMSS 370

Query: 375 IEPKPVGLTEVKVGEEYEIIVT 396
              + V L +V+VG+EYE+++T
Sbjct: 371 SPTQLVDLADVEVGKEYELVIT 392


>gi|357125364|ref|XP_003564364.1| PREDICTED: probable indole-3-acetic acid-amido synthetase
           GH3.1-like [Brachypodium distachyon]
          Length = 615

 Score =  265 bits (676), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 155/392 (39%), Positives = 220/392 (56%), Gaps = 9/392 (2%)

Query: 12  ELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDP-ESFKSCVPLVTHED 70
           E +E  E +T +A ++QR  L +IL +NA AEYL+  G++   D  +SF+ CVPLVT+ED
Sbjct: 22  EALEFIEHVTANAGKVQRRVLAEILAQNAPAEYLRRYGVSCSLDAVDSFRRCVPLVTYED 81

Query: 71  LQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLP-FNDELMETTLQIFRTSYAF 129
           LQP I RI +GD SPIL+GKPI+    SSGT+ G+ K +P   DEL   +L ++      
Sbjct: 82  LQPDILRIANGDTSPILSGKPISEFLTSSGTSGGERKLMPTIADELDRRSL-LYSLLMPV 140

Query: 130 RNREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDE 188
            ++  P + KGKA+  ++   +S+T GGL A    T+ YRS  F        +   SP+E
Sbjct: 141 MSQSVPGLDKGKAMYLLFVKAESRTPGGLAARPVLTSYYRSRQFLDRPHDPYTAYTSPNE 200

Query: 189 VIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLS 248
            I   D +QS+Y  LLCGL+ R ++  V + FA  L+ A R  E  W  LC DIR G L 
Sbjct: 201 AILCVDSYQSMYAQLLCGLVHRTDVLRVGAVFASGLLRAIRFLEKHWPRLCHDIRTGELD 260

Query: 249 SRITVPSIRAAMSKILK---PNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGS 305
             IT   +R A+ +IL+     P LAD I  +C   S W G++  L+P  KY+  I+TG+
Sbjct: 261 PEITDRPVRDAVGRILRGAANRPALADEIEAECLKPS-WEGIVRRLWPRTKYIDVIVTGA 319

Query: 306 MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRL 365
           M  Y+  L  Y G LPL    Y SSE + G N+NP   P    + ++P + YFEF+P   
Sbjct: 320 MSQYIPTLEFYGGGLPLTCTMYASSECYFGLNLNPMCKPSDVAYTLIPTMCYFEFLPVHR 379

Query: 366 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN 397
           G+  +         V L +VK+G  YE++VT 
Sbjct: 380 GS-NTNAKPSHQDLVDLVDVKLGHYYELVVTT 410


>gi|242054625|ref|XP_002456458.1| hypothetical protein SORBIDRAFT_03g036680 [Sorghum bicolor]
 gi|241928433|gb|EES01578.1| hypothetical protein SORBIDRAFT_03g036680 [Sorghum bicolor]
          Length = 610

 Score =  264 bits (674), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 156/395 (39%), Positives = 225/395 (56%), Gaps = 16/395 (4%)

Query: 12  ELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDP--ESFKSCVPLVTHE 69
           E +E  E +T +A ++QR  L +IL +NA AEYL+  G+ G +    E+F+  VPLVT+E
Sbjct: 23  EALEFIEHVTANAGKVQRRVLAEILTQNAPAEYLRRYGVPGGSADAVEAFRRVVPLVTYE 82

Query: 70  DLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLP-FNDELMETTLQIFRTSYA 128
            LQP I RI  GD SPIL+GKPI+    SSGT+ G+ K +P   DEL   +L ++     
Sbjct: 83  GLQPDILRIASGDTSPILSGKPISEFLTSSGTSGGERKLMPTIADELDRRSL-LYSLQMP 141

Query: 129 FRNREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPD 187
             ++  P + KGKA+  ++   +S+T GGL A    T+ YRS  F        ++  SP+
Sbjct: 142 VMSQSVPGLDKGKAMYLLFVKAESRTPGGLVARPVLTSYYRSRQFLERPHDPYTEYTSPN 201

Query: 188 EVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVL 247
           E I   D +QS+Y  LLCGL+ R ++  V + FA   + A R  E  W  LC DIR G L
Sbjct: 202 EAILCVDSYQSMYTQLLCGLVHRADVLRVGAVFASGFLRAVRFLEKHWPRLCRDIRTGTL 261

Query: 248 SSRITVPSIR-AAMSKILK-PNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGS 305
              IT  ++R A + ++L+  NP LAD I  +C+G S W G+I  L+P  KY+  I+TG+
Sbjct: 262 DPEITDRAVRDAVVGRVLRGANPALADEIEAECAGPS-WEGIIRRLWPRTKYIDVIVTGA 320

Query: 306 MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRL 365
           M  Y+  L  Y G LPL    Y SSE + G N+ P   P    + ++P + YFEF+P + 
Sbjct: 321 MSQYIPTLEFYGGGLPLACTMYASSECYFGLNLKPMCKPGDVAYTLIPTMCYFEFLPLQC 380

Query: 366 GNLESQVLCIEPKP---VGLTEVKVGEEYEIIVTN 397
            + ++     EP     VGL +VK+G EYE++VT 
Sbjct: 381 SDGKA-----EPSHRDLVGLVDVKLGHEYELVVTT 410


>gi|343455571|gb|AEM36357.1| At1g59500 [Arabidopsis thaliana]
          Length = 597

 Score =  263 bits (673), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 152/388 (39%), Positives = 221/388 (56%), Gaps = 14/388 (3%)

Query: 17  FETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQ 76
            E +TK+ + +Q + L +IL  N++ EYL+   LNG  D ++FKS VP+V +EDL+  IQ
Sbjct: 27  IEEMTKNPDSVQEKVLGEILSRNSNTEYLKRFDLNGAIDRKTFKSKVPVVIYEDLKTDIQ 86

Query: 77  RIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP- 135
           RI +GD S IL+  PIT    SSGT+ G+ K +P  +E +     +        N   P 
Sbjct: 87  RISNGDRSQILSSHPITEFLTSSGTSAGERKLMPTIEEDINRRQLLGNLLMPVMNLYVPG 146

Query: 136 IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDF 195
           + KGK L F++   +SKT GGL A  A T+ Y+S  F+       S   SP E I   D 
Sbjct: 147 LDKGKGLYFLFVKSESKTSGGLPARPALTSYYKSDYFRT--SDSDSVYTSPKEAILCCDS 204

Query: 196 HQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPS 255
            QS+Y  +LCGL+ R E+  + + F   L+ A    +  W+EL  DI  G LSS+I   +
Sbjct: 205 SQSMYTQMLCGLLMRHEVNRLGAVFPSGLLRAISFLQNNWKELSQDISTGTLSSKIFDHA 264

Query: 256 IRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLR 314
           I+  MS IL KP+ ELA+ +   CS   NW G+I +++PN KYL  I+TG+M  Y+  L 
Sbjct: 265 IKTRMSNILNKPDQELAEFLIGVCSQ-ENWEGIITKIWPNTKYLDVIVTGAMAQYIPMLE 323

Query: 315 HYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRL---GNLESQ 371
           +Y+G LP+ S  Y SSE + G N+NP   P   ++ + PN+ YFEF+P      G +E+ 
Sbjct: 324 YYSGGLPMASTIYASSESYFGINLNPMCKPSEVSYTIFPNMAYFEFLPHNHDGDGGVEAT 383

Query: 372 VLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
            L      V L +V+VG+EYE+++T  A
Sbjct: 384 SL------VELADVEVGKEYELVITTYA 405


>gi|224057862|ref|XP_002299361.1| GH3 family protein [Populus trichocarpa]
 gi|222846619|gb|EEE84166.1| GH3 family protein [Populus trichocarpa]
          Length = 606

 Score =  262 bits (670), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 157/411 (38%), Positives = 235/411 (57%), Gaps = 17/411 (4%)

Query: 1   MLEKMETVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFK 60
           ML   +  D +  ++  E +T +A +IQ++ L +IL  N   EYL++  LNG +  E+FK
Sbjct: 1   MLPVFDPNDNEAGLKLLEDLTNNACQIQQQVLEEILATNLHTEYLKSF-LNGDSGKENFK 59

Query: 61  SCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTL 120
           + VP+V +ED++P I+RI +G+ S I++ +PIT +  SSGT+ G+PK +P   E +E   
Sbjct: 60  NKVPIVNYEDIKPCIERIANGEPSSIISTQPITELLTSSGTSGGQPKIMPSTAEELERKT 119

Query: 121 QIFRTSYAFRNREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAM 179
             +       N+    + +GKA+  ++   +  T  GL A    T+ Y+S+ F+      
Sbjct: 120 FFYNLLVPVMNKYVDGLDQGKAMYLLFIKPEISTPSGLMARPVLTSYYKSNNFRNRAFNR 179

Query: 180 QSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELC 239
            +   SPDE I   D  QS+YC LLCGL+ R+E+  V + FA + + A +  E   +ELC
Sbjct: 180 YNVYTSPDETILCSDSKQSMYCQLLCGLVQRDEVLRVGAIFASAFLRAIKFLEEYLKELC 239

Query: 240 DDIREGVLSSRITVPSIRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFPNAKYL 298
            +IR G +S  IT P+ R A+  IL KPN ELADLI  +CSG S W G+I +L+P  KY+
Sbjct: 240 SNIRTGSVSDWITDPNCRNAVLSILSKPNSELADLIEDECSGKS-WEGIIKKLWPRTKYI 298

Query: 299 SGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYF 358
             I+TGSM  Y+  L  Y+G LPL+S  YGSSE ++G N  P   P   ++ +LPN+ YF
Sbjct: 299 EVIVTGSMAQYIPTLEFYSGGLPLVSTMYGSSECYLGINFKPLSNPYDVSYTLLPNMAYF 358

Query: 359 EFIPQRLGNLE--SQVLCI-----------EPKPVGLTEVKVGEEYEIIVT 396
           EF+P    + E    V C            + + V L +VK+G  YE+IVT
Sbjct: 359 EFLPVDNNHKEVVPDVQCNGVSVTDRNGKEKVEAVDLVDVKLGHYYELIVT 409


>gi|255582164|ref|XP_002531876.1| Indole-3-acetic acid-amido synthetase GH3.17, putative [Ricinus
           communis]
 gi|223528484|gb|EEF30513.1| Indole-3-acetic acid-amido synthetase GH3.17, putative [Ricinus
           communis]
          Length = 597

 Score =  262 bits (670), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 150/396 (37%), Positives = 225/396 (56%), Gaps = 14/396 (3%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           +EE E +T+ A+ +Q   LR+IL +N   EYL    + G  D + FK CVP+ T++D+ P
Sbjct: 14  LEEIEKLTEKADEVQESILREILIQNGQTEYLSKY-IKGSKDVKEFKYCVPVTTYKDMYP 72

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNRE 133
           YIQRI +G+ S ++TG+PIT +  SSGT+ G+PK +P  +E ++    I+       N+ 
Sbjct: 73  YIQRIANGEDSSLITGRPITEMLCSSGTSAGEPKLMPSINEDLDRRTFIYNLVMPIMNQY 132

Query: 134 FP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFG 192
              + +GKA+   +  ++  T  GL A T  T+ Y+S  FK   +   +   SPD+ I  
Sbjct: 133 ISGLDEGKAMYLYFVKEEMSTPCGLPARTVLTSYYKSKHFKCRARDSFNDFTSPDQAILC 192

Query: 193 PDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRIT 252
            D  QS+YC LL GL++R ++  + + FA +L+ A    E  W  LC+DIR G L   IT
Sbjct: 193 KDSDQSMYCQLLSGLVYRHQVLRIGAVFASALLRAISFLERNWVHLCNDIRNGELDPMIT 252

Query: 253 VPSIRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLK 311
            P  R+ MS IL  PNP LAD I + CS  S W G++  L+P  KY+  ++TGSM  Y+ 
Sbjct: 253 DPECRSCMSMILSSPNPSLADEIEEICSRPS-WKGILCLLWPRTKYIEAVVTGSMAQYVP 311

Query: 312 KLRHYA-GDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLES 370
            L++Y+   LPL+   Y SSE + G N+ P   P   +F ++PN+ YFEFIP  LG   +
Sbjct: 312 SLKYYSERKLPLVCTMYASSECYFGVNLKPLSDPAEVSFTLMPNMCYFEFIP--LGENGT 369

Query: 371 QVLCIEP-------KPVGLTEVKVGEEYEIIVTNVA 399
            ++ ++        K V L  V+ G  YE++VT  A
Sbjct: 370 LLMDVDEEEKVPIHKLVDLVHVRRGCYYELVVTTFA 405


>gi|225437300|ref|XP_002263353.1| PREDICTED: putative indole-3-acetic acid-amido synthetase GH3.9
           [Vitis vinifera]
          Length = 596

 Score =  262 bits (669), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 147/397 (37%), Positives = 224/397 (56%), Gaps = 10/397 (2%)

Query: 11  DELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHED 70
           +E ++E E  T  A+ +Q   L++I+  N   EYL+   + G  D   FK  VP++T++D
Sbjct: 11  EEALKELEKFTAKADEVQENILKEIIARNCETEYLKKY-MGGSKDVLEFKQSVPVITYKD 69

Query: 71  LQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFR 130
           + PYIQRI +G+ S +++G PIT +  SSGT+ G+PK +P   E +     ++       
Sbjct: 70  IHPYIQRIANGEDSSLISGHPITEMLCSSGTSGGEPKMMPSIAEDLNRRTFLYNLIMPIM 129

Query: 131 NREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEV 189
           N+  P + +GKA+   +   +  T  GL A    T+ Y+S  F+  ++   +   SPD+ 
Sbjct: 130 NQYIPGLDEGKAMFLYFVKAEMSTPCGLPARAVLTSYYKSKNFRCRVRDAFNDFTSPDQA 189

Query: 190 IFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSS 249
           I   D +QS+YC LL GL+ R ++  + + FA +L+ A    E  W  LC+DIR G L S
Sbjct: 190 ILCTDSNQSMYCQLLAGLVHRHQVLRLGAVFASALLRAISFLERHWVHLCNDIRTGHLDS 249

Query: 250 RITVPSIRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEH 308
            IT P  R++MS IL  PNP LAD I + CS  S W G++ +L+P AKY+  ++TGSM  
Sbjct: 250 SITDPECRSSMSTILSSPNPHLADEIEEICSHPS-WKGMLSQLWPRAKYIEAVITGSMAQ 308

Query: 309 YLKKLRHYA-GDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIP----- 362
           Y+  L +Y+ G LPL+   Y SSE + G N+ P   P    F +LPN+ YFEFIP     
Sbjct: 309 YIPSLEYYSGGKLPLVCTMYASSECYFGVNMKPLCDPADVAFTLLPNMCYFEFIPLGENG 368

Query: 363 QRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
             L +++ +    + K V L  V++G  YE++VT  A
Sbjct: 369 TLLMDMDEEKGVPKEKLVDLVHVRLGCYYELVVTTFA 405


>gi|413949768|gb|AFW82417.1| hypothetical protein ZEAMMB73_006681 [Zea mays]
          Length = 633

 Score =  261 bits (668), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 143/402 (35%), Positives = 219/402 (54%), Gaps = 28/402 (6%)

Query: 12  ELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDP--ESFKSCVPLVTHE 69
           +L+E  E +T  A ++QR  L +IL +NA AEYL+ LG++G      E+F+   PLVT+E
Sbjct: 23  DLLEYIERVTAGAAQVQRRVLSEILAQNAPAEYLRRLGVSGAAPGAVEAFRRAAPLVTYE 82

Query: 70  DLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAF 129
           D+ P + RI +GD SPIL+GKPI     SSGT+ G+ K +P   + M+    ++      
Sbjct: 83  DILPDVLRIANGDTSPILSGKPIREFLTSSGTSGGERKLMPAIADEMDRRSLLYSLLMPV 142

Query: 130 RNREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDE 188
            ++  P + +G+ +   +   +S+T GG  A    T+ YRS  F        +   SPDE
Sbjct: 143 MSQAVPGLDRGRCMYLYFVKAESRTPGGHPARPVLTSFYRSRHFLERPHDPYTVHTSPDE 202

Query: 189 VIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLS 248
            +   D +QS+Y  LLCGL+ R ++  V + FA   + A R  E  W+ LC D+R G L 
Sbjct: 203 AVLCVDAYQSMYAQLLCGLVHRADVLRVGAVFASGFLRAIRFLEKHWQRLCRDLRRGALG 262

Query: 249 SRITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEH 308
           + +T  S+RAA++++L+ +P LAD +  +C+  S W G+I  ++P  KY+  I+TG+M  
Sbjct: 263 AEVTDRSVRAAVARVLRADPALADAVEAECARPS-WQGIIRRVWPGTKYIDVIVTGAMAQ 321

Query: 309 YLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNL 368
           Y+  L  Y G LPL    Y SSE + G N+NP   P    + ++P + YFEF+P      
Sbjct: 322 YIPTLEFYGGGLPLTCTMYASSESYFGINLNPMCKPSEVAYTLIPTMCYFEFLP------ 375

Query: 369 ESQVLCIEPKPVG-------------LTEVKVGEEYEIIVTN 397
                  +P P G             L +VK+G EYE++VT 
Sbjct: 376 -----LPQPGPGGTDDADPDHRDLVDLVDVKLGHEYELVVTT 412


>gi|302792525|ref|XP_002978028.1| hypothetical protein SELMODRAFT_233086 [Selaginella moellendorffii]
 gi|300154049|gb|EFJ20685.1| hypothetical protein SELMODRAFT_233086 [Selaginella moellendorffii]
          Length = 549

 Score =  261 bits (668), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 164/380 (43%), Positives = 217/380 (57%), Gaps = 28/380 (7%)

Query: 18  ETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQR 77
           E  TK+A  IQRE L++ILE+NA  EYL   GL+  ++       +PLV + D++  I+R
Sbjct: 2   EHATKNAAAIQRELLQQILEKNAGTEYLTRHGLDEESNLVDGFYKLPLVEYNDIEADIKR 61

Query: 78  IIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFPIG 137
           I DGD   IL   PI+    SSGTT G+ K +P N       L     S A+ +R F I 
Sbjct: 62  IADGDTGRILCSDPISQFFISSGTTTGRSKLIPSNSRFFHPPL----ISLAW-HRVFTIN 116

Query: 138 KGKA-LQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFH 196
             +  L F + SKQS TKGG  A T TT+   S+ FK   +A  S C             
Sbjct: 117 PDETYLAFWFASKQSLTKGGFKAETVTTSGLNSAHFK---RAAASFC------------- 160

Query: 197 QSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPSI 256
             LYCHLLCGL+ REE+ +V S FA +L  AFR  E VW EL +DI  G LSSRIT P++
Sbjct: 161 --LYCHLLCGLLRREEVTVVISAFAFALTEAFRVLEQVWSELLEDIEAGSLSSRITDPTL 218

Query: 257 RAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRHY 316
           R AMS I  P+PELA+ + ++    S   G++  L+PNAK +  + TG+M  Y  +LR  
Sbjct: 219 RLAMSGIAPPSPELAEQLRREFRSFS-MDGIVQRLWPNAKSVVAVTTGAMAPYAPRLRAL 277

Query: 317 AGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIE 376
           AG  P++  +Y SSE  IG N++P+  P  ATF V P   YFEF+    G  +   L  E
Sbjct: 278 AGKTPVVCGNYFSSECLIGINLSPASSP--ATFTVNPEFAYFEFLSYHDGETKLNGL-EE 334

Query: 377 PKPVGLTEVKVGEEYEIIVT 396
            +PVGLTEV +GE+YEI+VT
Sbjct: 335 QRPVGLTEVMIGEKYEIVVT 354


>gi|125600829|gb|EAZ40405.1| hypothetical protein OsJ_24856 [Oryza sativa Japonica Group]
          Length = 603

 Score =  261 bits (667), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 146/402 (36%), Positives = 227/402 (56%), Gaps = 33/402 (8%)

Query: 9   DVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLN-GRTDPESFKSCVPLVT 67
           DV++L    E +T D + +Q   L +IL  NA AEYL   G + G T   +F++ VP+V+
Sbjct: 26  DVEKL-RLIEELTSDVDAVQERVLSEILGRNAGAEYLTRCGHDAGDTGRATFRAKVPVVS 84

Query: 68  HEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFL--PFNDE--------LME 117
           ++DL+PYIQR+ DGD SP+L+  PIT    SSGT+ G+ K +    +D         L+ 
Sbjct: 85  YDDLKPYIQRVADGDCSPVLSTHPITEFLTSSGTSAGECKLILVAMDDSGRRQALHGLIG 144

Query: 118 TTLQIFRTSYAFRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMK 177
             L+++            + KGK L F++   ++KT+GGL A  A T+VY+S  FK+   
Sbjct: 145 PVLKLYVPG---------LEKGKGLYFMFVKSETKTRGGLTAWFALTSVYKSEQFKS--- 192

Query: 178 AMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEE 237
            M     SP   I   D  QS+Y  ++CGL  R ++    + FA +LV A R  +L W +
Sbjct: 193 -MAIAYTSPTAAILCEDAFQSMYAQMVCGLCQRHDVVRFGAVFAAALVRAIRFLQLNWGQ 251

Query: 238 LCDDIREGVLSSRITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKY 297
           L  DI  G L   +  PS+R A+S IL+ + ELA+ +  +CS   +W G+I  ++PN KY
Sbjct: 252 LAADIEAGELGPHVADPSVREAVSGILRSDAELAEFVRIECSK-GDWAGIITRIWPNTKY 310

Query: 298 LSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGY 357
           +  I+TG+M  Y++ L++Y+G LP++S  Y SSE + G N+ P   P   ++ ++PN  Y
Sbjct: 311 VDAIVTGAMAQYIRTLQYYSGGLPIVSTSYASSECFFGINLRPVCDPSEVSYTIMPNTAY 370

Query: 358 FEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
           FEF+P  +G +      ++     L  V+VG EYE+++T  A
Sbjct: 371 FEFLP--VGEVVDATNLVD-----LARVEVGREYEVVITTYA 405


>gi|183013708|gb|ACC38383.1| putative GH3-like protein [Brassica juncea]
          Length = 592

 Score =  260 bits (665), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 144/385 (37%), Positives = 216/385 (56%), Gaps = 14/385 (3%)

Query: 17  FETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQ 76
            E +T + ++IQ + L++IL  N+  EYLQN  L+G +  E FK  +P+VT++D++PYI 
Sbjct: 16  LEDLTWNVKQIQDDLLKEILTLNSGTEYLQNF-LHGSSAKELFKKNLPIVTYKDVKPYID 74

Query: 77  RIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME-TTLQIFRTSYAFRNREFP 135
           R+ +G+ S I++  PIT    SSGT+ G  K LP N + ++ +       ++  R     
Sbjct: 75  RVANGESSNIISTLPITNFFNSSGTSGGANKILPSNSKYLDGSAFSTDLLAHVIRKHVKG 134

Query: 136 IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDF 195
           + +GK + F      +KT GG       +   +S  FK           SPDEV+ G D 
Sbjct: 135 VERGKGMLFFLTGHDTKTPGGFPIEDGISWYLKSDYFKNRPSTWFYSYTSPDEVMLGSDL 194

Query: 196 HQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPS 255
            ++LYCHLLCGL+ R+E+  + STFA  +V   +  E  W+ELC +IR G LS  IT   
Sbjct: 195 KENLYCHLLCGLVQRDEVTRIGSTFASGMVRVIKVLEDSWKELCSNIRSGNLSEWITDSG 254

Query: 256 IRAAMSKIL--KPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKL 313
            R ++S +L  +P  +L+D I   CS  S W G++ +L+P    +  I TGSM  Y+  L
Sbjct: 255 CRNSVSLVLGGQPRHKLSDEIESICSQKS-WKGIMKKLWPQTLCIEAIATGSMAQYVPTL 313

Query: 314 RHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVL 373
           +HY+GD+PL+S  Y SSE   G N +P   PE  ++ ++PNI YFEFIP   GN      
Sbjct: 314 KHYSGDVPLVSTIYASSESMFGINTDPLCQPENTSYTLMPNISYFEFIPTEGGN------ 367

Query: 374 CIEPKPVGLTEVKVGEEYEIIVTNV 398
                 V L +VK+G  Y+++VTN+
Sbjct: 368 ---GDVVDLADVKLGCSYQLLVTNL 389


>gi|226503339|ref|NP_001146696.1| uncharacterized protein LOC100280297 [Zea mays]
 gi|219888377|gb|ACL54563.1| unknown [Zea mays]
          Length = 633

 Score =  260 bits (665), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 143/402 (35%), Positives = 218/402 (54%), Gaps = 28/402 (6%)

Query: 12  ELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDP--ESFKSCVPLVTHE 69
           +L+E  E +T  A ++QR  L +IL +NA AEYL+ LG++G      E+F+   PLVT+E
Sbjct: 23  DLLEYIERVTAGAAQVQRRVLSEILAQNAPAEYLRRLGVSGAAPGAVEAFRRAAPLVTYE 82

Query: 70  DLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAF 129
           D+ P + RI +GD SPIL+GKPI     SSGT+ G+ K +P   + M+    ++      
Sbjct: 83  DILPDVLRIANGDTSPILSGKPIREFLTSSGTSGGERKLMPAIADEMDRRSLLYSLLMPV 142

Query: 130 RNREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDE 188
            ++  P + +G+ +   +    S+T GG  A    T+ YRS  F        +   SPDE
Sbjct: 143 MSQAVPGLDRGRCMYLYFVKAGSRTPGGHPARPVLTSFYRSRHFLERPHDPYTVHTSPDE 202

Query: 189 VIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLS 248
            +   D +QS+Y  LLCGL+ R ++  V + FA   + A R  E  W+ LC D+R G L 
Sbjct: 203 AVLCVDAYQSMYAQLLCGLVHRADVLRVGAVFASGFLRAIRFLEKHWQRLCRDLRRGALG 262

Query: 249 SRITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEH 308
           + +T  S+RAA++++L+ +P LAD +  +C+  S W G+I  ++P  KY+  I+TG+M  
Sbjct: 263 AEVTDRSVRAAVARVLRADPALADAVEAECARPS-WQGIIRRVWPGTKYIDVIVTGAMAQ 321

Query: 309 YLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNL 368
           Y+  L  Y G LPL    Y SSE + G N+NP   P    + ++P + YFEF+P      
Sbjct: 322 YIPTLEFYGGGLPLTCTMYASSESYFGINLNPMCKPSEVAYTLIPTMCYFEFLP------ 375

Query: 369 ESQVLCIEPKPVG-------------LTEVKVGEEYEIIVTN 397
                  +P P G             L +VK+G EYE++VT 
Sbjct: 376 -----LPQPGPGGTDDADPDHRDLVDLVDVKLGHEYELVVTT 412


>gi|449468912|ref|XP_004152165.1| PREDICTED: indole-3-acetic acid-amido synthetase GH3.17-like
           [Cucumis sativus]
          Length = 611

 Score =  260 bits (664), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 147/393 (37%), Positives = 230/393 (58%), Gaps = 14/393 (3%)

Query: 17  FETITKDAERIQRETLRKILEENASAEYLQNLGLNGRT---DPESFKSCVPLVTHEDLQP 73
            E +T +A++IQ + ++KIL +N++ EYL++   N  +   D ++FK  VP+V +ED++P
Sbjct: 17  LEDLTTNAKQIQEQVIQKILIQNSNTEYLKSFLHNHHSHSLDLQTFKHSVPVVNYEDIKP 76

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNRE 133
           YI+RI +G+ S I++ +PIT +  SSGT+ G+PK +P   E ++     +       N+ 
Sbjct: 77  YIERIANGEPSHIISSQPITELLTSSGTSGGQPKMMPSTAEDLDRKTFFYNLLVPVLNKY 136

Query: 134 FP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFG 192
              + +GK +  ++   +  T  GL A    T+ Y+S  F+       +   SPDE I  
Sbjct: 137 VDGLEEGKGMYLLFIKPEMSTPSGLMARPVLTSYYKSKNFRNRPFNKYNVYTSPDETILC 196

Query: 193 PDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRIT 252
            D  QS+YC LLCGL+ R+E+  V + FA + + A +  E  W+EL D+IR+G LS  I+
Sbjct: 197 SDSKQSMYCQLLCGLVQRDEVLRVGAVFASAFLRAIKFLEDYWKELSDNIRKGELSQWIS 256

Query: 253 VPSIRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLK 311
            P+ RA++S +L K NP LADLI   C G  +W G+I +L+P  KY+  I+TGSM  Y+ 
Sbjct: 257 DPNCRASVSSVLTKSNPVLADLIDGLC-GEKSWEGIIKKLWPKTKYIEVIVTGSMAQYIP 315

Query: 312 KLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLE-- 369
            L  Y+G LPL+S  Y SSE + G N NP   P   ++ +LPN+ +FEF+P    + E  
Sbjct: 316 TLEFYSGGLPLISTMYASSECYFGINFNPLSKPSDVSYTLLPNMAFFEFLPVEKNDGELS 375

Query: 370 ------SQVLCIEPKPVGLTEVKVGEEYEIIVT 396
                 +  +  E K V L +VK+G+ YE++VT
Sbjct: 376 HCNGTTNTSVQEEFKTVDLVDVKLGQYYELVVT 408


>gi|449462926|ref|XP_004149186.1| PREDICTED: indole-3-acetic acid-amido synthetase GH3.6-like
           [Cucumis sativus]
 gi|449528617|ref|XP_004171300.1| PREDICTED: indole-3-acetic acid-amido synthetase GH3.6-like
           [Cucumis sativus]
          Length = 602

 Score =  259 bits (663), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 143/383 (37%), Positives = 219/383 (57%), Gaps = 6/383 (1%)

Query: 18  ETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQR 77
           E +T +A+++QR  L +IL  NA  EYL+  GL G TD ++FK+ +PL+++ED+QP I R
Sbjct: 32  EDVTANADQVQRRVLTEILSRNAGVEYLRRHGLGGATDCKTFKNTLPLISYEDIQPDINR 91

Query: 78  IIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP-I 136
           I +GD S IL   PI+    SSGT+ G+ K +P  +E +E    ++       ++    +
Sbjct: 92  IANGDSSSILCSSPISEFLTSSGTSGGERKLMPTIEEELERRSSLYSLLMPVMSQFIEGL 151

Query: 137 GKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFH 196
            KGK + F++   +SKT  GL A    T+ Y+S  FK       +   SP+E I   D +
Sbjct: 152 EKGKGMYFLFIKSESKTPSGLLARPVLTSYYKSPHFKNRPFDPYTNYTSPNEAILCSDSY 211

Query: 197 QSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPSI 256
           QS+Y  LLCGL+ R ++  V + FA   + A R  E  +  LC DIR G L+S IT   I
Sbjct: 212 QSMYAQLLCGLLHRTDVLRVGAVFASGFIRAIRFLEKHYTLLCHDIRTGTLNSEITDQGI 271

Query: 257 RAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRHY 316
           R ++ KILK + +LAD +  +C G   W G+I  ++PN KY+  I+TG+M  Y+  L +Y
Sbjct: 272 RESVRKILKADGKLADFVEGEC-GKKCWGGIISRIWPNTKYVDVIVTGTMSQYIGTLDYY 330

Query: 317 AGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIE 376
           +  LP++   Y SSE + G N+ P   P    + ++P + YFEF+P       S+   +E
Sbjct: 331 SNGLPIVCTMYASSECYFGVNLKPMCKPGEVAYTLIPTMAYFEFLPVN----RSKEKELE 386

Query: 377 PKPVGLTEVKVGEEYEIIVTNVA 399
            + V L +VK+G EYE++VT  +
Sbjct: 387 KELVDLVDVKLGHEYELVVTTYS 409


>gi|449517026|ref|XP_004165547.1| PREDICTED: indole-3-acetic acid-amido synthetase GH3.17-like,
           partial [Cucumis sativus]
          Length = 409

 Score =  259 bits (663), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 149/409 (36%), Positives = 237/409 (57%), Gaps = 14/409 (3%)

Query: 1   MLEKMETVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRT---DPE 57
           ML   +  + +  ++  E +T +A++IQ + ++KIL +N++ EYL++   N  +   D +
Sbjct: 1   MLPNFDPNNNESGLKLLEDLTTNAKQIQEQVIQKILIQNSNTEYLKSFLHNHHSHSLDLQ 60

Query: 58  SFKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
           +FK  VP+V +ED++PYI+RI +G+ S I++ +PIT +  SSGT+ G+PK +P   E ++
Sbjct: 61  TFKHSVPVVNYEDIKPYIERIANGEPSHIISSQPITELLTSSGTSGGQPKMMPSTAEDLD 120

Query: 118 TTLQIFRTSYAFRNREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEM 176
                +       N+    + +GK +  ++   +  T  GL A    T+ Y+S  F+   
Sbjct: 121 RKTFFYNLLVPVLNKYVDGLEEGKGMYLLFIKPEMSTPSGLMARPVLTSYYKSKNFRNRP 180

Query: 177 KAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWE 236
               +   SPDE I   D  QS+YC LLCGL+ R+E+  V + FA + + A +  E  W+
Sbjct: 181 FNKYNVYTSPDETILCSDSKQSMYCQLLCGLVQRDEVLRVGAVFASAFLRAIKFLEDYWK 240

Query: 237 ELCDDIREGVLSSRITVPSIRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFPNA 295
           EL D+IR+G LS  I+ P+ RA++S +L K NP LADLI   C G  +W G+I +L+P  
Sbjct: 241 ELSDNIRKGELSQWISDPNCRASVSLVLTKSNPVLADLIDGLC-GEKSWEGIIKKLWPKT 299

Query: 296 KYLSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNI 355
           KY+  I+TGSM  Y+  L  Y+G LPL+S  Y SSE + G N NP   P   ++ +LPN+
Sbjct: 300 KYIEVIVTGSMAQYIPTLEFYSGGLPLISTMYASSECYFGINFNPLSKPSDVSYTLLPNM 359

Query: 356 GYFEFIPQRLGNLE--------SQVLCIEPKPVGLTEVKVGEEYEIIVT 396
            +FEF+P    + E        +  +  E K V L +VK+G+ YE++VT
Sbjct: 360 AFFEFLPVEKNDGELSHCNGTTNTSVQEEFKTVDLVDVKLGQYYELVVT 408


>gi|82592857|sp|P0C0M3.1|GH311_ORYSJ RecName: Full=Probable indole-3-acetic acid-amido synthetase
           GH3.11; AltName: Full=Auxin-responsive GH3-like protein
           11; Short=OsGH3-11
 gi|222637661|gb|EEE67793.1| hypothetical protein OsJ_25530 [Oryza sativa Japonica Group]
          Length = 591

 Score =  259 bits (662), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 146/391 (37%), Positives = 221/391 (56%), Gaps = 7/391 (1%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           +EE E +T +A+  Q   L KILE N + EYL    +NG T+  +FK  VP+VT++ + P
Sbjct: 14  LEELEMLTVNAKEAQELILTKILERNQATEYLSKF-MNGSTNISAFKRHVPVVTYDKVHP 72

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNRE 133
           YI RI  G+ S IL G+ I  + RSSGT++G+P+ +P   + ++    ++       N+ 
Sbjct: 73  YILRIATGEESSILCGEYILELLRSSGTSRGEPRLMPSILKDLDRRTYLYSLIMPIMNKY 132

Query: 134 FP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFG 192
              +G+GKA+  ++   ++ T  G+   +  T+ Y+S  F      + +   SPDEVI  
Sbjct: 133 ISGLGEGKAMYLLFVKAETLTDSGIPVRSVLTSYYKSPHFLHRKHDLYNNYTSPDEVILC 192

Query: 193 PDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRIT 252
           PD  QS+YC LLCGL+ R+ +  + + FA + + +    E  W +L +DIR G L+S IT
Sbjct: 193 PDSQQSMYCQLLCGLVERQHVLRIGAVFASAFLRSISFLEQHWRDLVNDIRIGQLNSSIT 252

Query: 253 VPSIRAAMSKILK-PNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLK 311
            P+ R AM   L  PNPELAD +   CS   +W G++  L+PN KY+  ++TG+M  Y+ 
Sbjct: 253 SPACRLAMLNFLALPNPELADQVEAICS-CGSWKGILGRLWPNVKYIEAVLTGTMAQYIP 311

Query: 312 KLRHYAGD-LPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLG-NLE 369
            L  Y G  +P +   Y SSE + G N++P   P   ++ +LPN+ YFEFIP   G  L 
Sbjct: 312 MLEFYGGGAIPFVCTMYASSESYFGVNLSPLCSPADVSYTILPNMAYFEFIPLEDGLRLT 371

Query: 370 SQVLCIE-PKPVGLTEVKVGEEYEIIVTNVA 399
                IE  K V L +VKVG  YE++VT  +
Sbjct: 372 DHEEVIENDKLVSLVDVKVGCYYELVVTTFS 402


>gi|356500270|ref|XP_003518956.1| PREDICTED: putative indole-3-acetic acid-amido synthetase
           GH3.9-like [Glycine max]
          Length = 606

 Score =  259 bits (662), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 154/399 (38%), Positives = 219/399 (54%), Gaps = 11/399 (2%)

Query: 11  DELIEEFETITKDAERIQRETLRKILEENASAEYLQNL--GLNGRTDPESFKSCVPLVTH 68
           +E ++E E +T  A  +Q   L++IL +N   EYL     G    TD   FK CVP+ T+
Sbjct: 11  EEALKEIERLTMKAAEVQEGLLKQILTQNRETEYLNKYMRGEKNTTDIAEFKRCVPVTTY 70

Query: 69  EDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYA 128
           E + PYIQRI +G+ S ++T  PIT +  SSGT+ G+PK +P   E +E    ++     
Sbjct: 71  ERIFPYIQRIANGEDSSLITSHPITEMLCSSGTSSGEPKMMPSIAEDLERRTFVYNLITP 130

Query: 129 FRNREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPD 187
             N+  P + +GKA+   +   +  T  GL A T  T+ Y+S  FK       +   SPD
Sbjct: 131 IINQYVPDLDEGKAMYLYFVKAEMCTPCGLPARTVLTSYYKSKHFKCRTHDPWNDYTSPD 190

Query: 188 EVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVL 247
           + I   D +QS++C LL GL+ R  +  + + FA +L+ A    E  W  LC+DI  G L
Sbjct: 191 QSILCNDSNQSMHCQLLAGLVHRRHVLRLGAVFASALLRAISFLERNWRHLCEDICSGQL 250

Query: 248 SSRITVPSIRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSM 306
           SS IT PS R+ MS  L  PNP LAD I + CS  S W G++ +L+P AK++  ++TGSM
Sbjct: 251 SSFITDPSCRSRMSTFLSSPNPRLADEITRICSQKS-WKGILCQLWPKAKFIEAVVTGSM 309

Query: 307 EHYLKKLRHYA-GDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQR- 364
             Y+  L+HY+ G LPL+   Y SSE + G N+ P   P    F +LPN+GYFEF+P R 
Sbjct: 310 AQYVPALKHYSEGKLPLVCTMYASSECYFGVNLKPLCDPSDVAFTLLPNMGYFEFLPLRH 369

Query: 365 ----LGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
               L + +        K V L  VK+G  YE +VT  A
Sbjct: 370 NGTLLMDFDEGEQVPNDKLVDLVHVKLGCFYEPVVTTFA 408


>gi|392311805|pdb|4EQ4|A Chain A, Crystal Structure Of Seleno-Methionine Derivatized Gh3.12
 gi|392311806|pdb|4EQ4|B Chain B, Crystal Structure Of Seleno-Methionine Derivatized Gh3.12
          Length = 581

 Score =  259 bits (661), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 146/394 (37%), Positives = 222/394 (56%), Gaps = 13/394 (3%)

Query: 9   DVDELIE-EFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVT 67
           D++E  E + + +T + + IQ   L +I+  N   EYLQ   L  R D E FK  VP+V+
Sbjct: 12  DINETFEKQLKDLTSNVKSIQDNLLEEIITPNTKTEYLQRF-LIDRFDKELFKKNVPIVS 70

Query: 68  HEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSY 127
           +ED++PY+ R+++G+ S +++ + IT    SSGT+ G  K  P+N++ ++    I+    
Sbjct: 71  YEDIKPYLDRVVNGESSDVISARTITGFLLSSGTSGGAQKXXPWNNKYLDNLTFIYDLRX 130

Query: 128 AFRNREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSP 186
               +    + +GK   F++  ++S T  GL A  AT++ ++S  FK           SP
Sbjct: 131 QVITKHVKGVEEGKGXXFLFTKQESXTPSGLPARVATSSYFKSDYFKNRPSNWYYSYTSP 190

Query: 187 DEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGV 246
           DEVI  P+  +SLYCHLLCGL+ R+E+    S FA   V A    +  WEELC +IR G 
Sbjct: 191 DEVILCPNNTESLYCHLLCGLVQRDEVVRTGSIFASVXVRAIEVLKNSWEELCSNIRSGH 250

Query: 247 LSSRITVPSIRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGS 305
           LS+ +T    + ++S +L  P PELAD I + C+  ++W G++  L+PN KY+  ++TGS
Sbjct: 251 LSNWVTDLGCQNSVSLVLGGPRPELADTIEEICNQ-NSWKGIVKRLWPNTKYIETVVTGS 309

Query: 306 MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRL 365
              Y+  L +Y  DLPL+S  YGSSE   G N++P   PE  ++   PN  YFEFIP   
Sbjct: 310 XGQYVPXLNYYCNDLPLVSTTYGSSETTFGINLDPLCKPEDVSYTFXPNXSYFEFIPXDG 369

Query: 366 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
           G+        +   V L +VK+G  YE +VTN A
Sbjct: 370 GD--------KNDVVDLEDVKLGCTYEPVVTNFA 395


>gi|242091013|ref|XP_002441339.1| hypothetical protein SORBIDRAFT_09g024710 [Sorghum bicolor]
 gi|241946624|gb|EES19769.1| hypothetical protein SORBIDRAFT_09g024710 [Sorghum bicolor]
          Length = 647

 Score =  258 bits (660), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 145/392 (36%), Positives = 218/392 (55%), Gaps = 7/392 (1%)

Query: 12  ELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDP--ESFKSCVPLVTHE 69
           EL+E  E +T  A ++QR  L +IL +NA AEYL+ LG+ G      ++F+   PLVT+E
Sbjct: 27  ELLEYIERVTAGAAQVQRRVLAEILAQNAPAEYLRRLGVAGDAPGAVDAFRRAAPLVTYE 86

Query: 70  DLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAF 129
           D+ P + RI +GD SPIL+GKPI     SSGT+ G+ K +P   + M+    ++      
Sbjct: 87  DILPDVLRIANGDTSPILSGKPIREFLTSSGTSGGERKLMPAIADEMDRRSLLYSLLMPV 146

Query: 130 RNREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDE 188
            ++  P + KGK +   +   +S+T GG  A    T+ YRS  F        +   SPDE
Sbjct: 147 MSQAVPGLDKGKCMYLYFVKAESRTPGGHPARPVLTSFYRSRHFLERPHDPYTVYTSPDE 206

Query: 189 VIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLS 248
            I   D +QS+Y  LLCGL+ R ++  V + FA   + A R  E  W+ LC DIR G L 
Sbjct: 207 AILCVDAYQSMYAQLLCGLVHRADVLRVGAVFASGFLRAIRFLEKHWQRLCRDIRTGTLD 266

Query: 249 SR-ITVPSIRAAMSK--ILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGS 305
           +  +T  ++RAA+ +  +L+ +P LAD +  +C+  S W G+I  ++PN KY+  I+TG+
Sbjct: 267 AEAVTDRAVRAAVEQRVLLRADPALADAVEAECARTS-WQGIIRRVWPNTKYIDVIVTGA 325

Query: 306 MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRL 365
           M  Y+ +L  Y G LPL    Y SSE + G N+NP   P    + ++P + YFEF+P   
Sbjct: 326 MAQYIPQLEFYGGGLPLTCTMYASSESYFGINLNPMCKPSEVAYTLIPTMCYFEFLPLPQ 385

Query: 366 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN 397
              +      +   V L +VK+G EYE++VT 
Sbjct: 386 PGDDDAGEPDQRDLVDLVDVKLGHEYELVVTT 417


>gi|357128827|ref|XP_003566071.1| PREDICTED: probable indole-3-acetic acid-amido synthetase
           GH3.4-like [Brachypodium distachyon]
          Length = 629

 Score =  258 bits (659), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 146/392 (37%), Positives = 223/392 (56%), Gaps = 11/392 (2%)

Query: 12  ELIEEFETITKDAERIQRETLRKILEENASAEYLQNL-GLNGRT--DPESFKSCVPLVTH 68
           +LIE   T   + +++    L++IL++NA AEYL+ + G++G +    E F+   PLVT+
Sbjct: 29  DLIEHLTTYPAETQQL---VLKEILQQNAPAEYLRRIVGVSGASPGAAEDFRRLAPLVTY 85

Query: 69  EDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYA 128
           ED+ P++ RI +GD SPIL+G+PI     SSGT+ G+ K +P   E ME    ++     
Sbjct: 86  EDILPFVTRIANGDSSPILSGRPIREFLTSSGTSGGERKLMPSIAEEMERRSLLYSLLMP 145

Query: 129 FRNREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPD 187
             ++  P + KGKA+   +   +S+T GGL A    T+ Y+S  F+       +   SPD
Sbjct: 146 VMSQAVPGLDKGKAMYLYFVKAESRTPGGLPARPVLTSYYKSRHFRERAHDPFTVHTSPD 205

Query: 188 EVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVL 247
           E I   D HQS+Y  LLCGL+ R ++  V + FA   + A       W  LC DIR G +
Sbjct: 206 EAILCVDAHQSMYAQLLCGLVHRADVLRVGAVFASGFLRAIDFLRQHWPRLCHDIRTGAV 265

Query: 248 SSR-ITVPSIRAAMSKILK-PNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGS 305
            +  IT  ++R A+ ++L+ P+P LAD +   C+G S W G+I +++PN KY+  I+TG+
Sbjct: 266 DAGVITDRAVRGAVERVLRAPDPALADAVEDACAGAS-WQGIIRKVWPNTKYIDVIVTGA 324

Query: 306 MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRL 365
           M  Y+  L HY G LPL    Y SSE + G N+NP   P    + ++P + +FEF+P + 
Sbjct: 325 MAQYIPTLEHYGGGLPLACTMYASSECYFGLNLNPICDPAEVAYTLIPTMCFFEFLPVQ- 383

Query: 366 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN 397
            N E+         VGL +VK+G EYE++VT 
Sbjct: 384 SNAETGEEPDHRDLVGLADVKLGHEYELVVTT 415


>gi|302815005|ref|XP_002989185.1| hypothetical protein SELMODRAFT_129356 [Selaginella moellendorffii]
 gi|300143085|gb|EFJ09779.1| hypothetical protein SELMODRAFT_129356 [Selaginella moellendorffii]
          Length = 577

 Score =  256 bits (655), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 150/399 (37%), Positives = 226/399 (56%), Gaps = 12/399 (3%)

Query: 5   METVDVDELIEEF-ETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCV 63
           M T D D+ I +F   IT+D   +Q   L +IL +NA+ EY +  GL G    + FK  +
Sbjct: 1   MNTRDSDDQILDFVGDITRDVGAVQAGILEQILAKNANVEYFKRHGLCGVPSRDDFKRAM 60

Query: 64  PLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIF 123
           PL ++ D++  I R+  GD S ILT  P+  +  SSGT+ GK K  P ++     ++ + 
Sbjct: 61  PLSSYTDIESDITRMASGDDSRILTDAPVRQMLTSSGTSGGKQKLFPKSETYDIESVLMN 120

Query: 124 RTSYAFRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQC 183
           R S A  N++ PI +GK+LQFIY  K   T GG+   +  +  + S  F        S  
Sbjct: 121 RISRACLNKQIPI-QGKSLQFIYVRKPGVTPGGVVTCSGLSGYFTSPAFLNRKIDPSSGF 179

Query: 184 CSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIR 243
            SPD+V+   DF QS Y HLLCGL+   ++  + + FA +LV + +     W +LC DIR
Sbjct: 180 TSPDQVLLCVDFDQSSYAHLLCGLVQSTQVATLGAPFASTLVRSMKRLSDCWRDLCQDIR 239

Query: 244 EGVLSSRITVP-SIRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGI 301
            G ++S I    S++ A++ +L KPNPELAD I ++CS   NW G+I  LFPNA+ +  I
Sbjct: 240 SGKVNSNIISDLSVKHAVNAVLRKPNPELADAIERECSK-KNWRGIITRLFPNARVIQTI 298

Query: 302 MTGSMEHYLKKLRHYAGDLPLMSADYGSSE-GWIGANVNPSLPPELATFAVLPNIGYFEF 360
           +TGSM+ Y+  +   +G+LP+ S  Y SSE   +G N++P  PP    + + P+  Y+EF
Sbjct: 299 VTGSMQQYVPVIDFLSGELPIASPLYASSECSSLGVNLSPLSPPSPILYTIFPSFAYYEF 358

Query: 361 IPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
           +P    N  S  L      V L +V++G+EYE+++TN A
Sbjct: 359 LPVNCKNSSSGDL------VELADVELGKEYELVITNRA 391


>gi|302774072|ref|XP_002970453.1| hypothetical protein SELMODRAFT_93250 [Selaginella moellendorffii]
 gi|300161969|gb|EFJ28583.1| hypothetical protein SELMODRAFT_93250 [Selaginella moellendorffii]
          Length = 535

 Score =  256 bits (653), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 138/385 (35%), Positives = 217/385 (56%), Gaps = 33/385 (8%)

Query: 15  EEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPY 74
           ++ E+ TKDA  +Q   L +++E N   EYL+  G  GR D       +P++ + D+   
Sbjct: 8   DDIESKTKDAAAVQANLLSQMMELNGETEYLRRYG--GRFDS------LPIIEYHDVADE 59

Query: 75  IQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREF 134
           +QRI +GD SPILT +P+    +SSGT  G+PK +P   + +E           FR   +
Sbjct: 60  VQRIANGDTSPILTAEPVVRFFKSSGTVTGEPKLIPATSKSLE---------LLFRRPVY 110

Query: 135 PIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPD 194
            +     L F++   ++K+ GGL   T +     S  FK + + ++    SP +++  PD
Sbjct: 111 MMESDVCLGFLFAKPENKSPGGLPVSTTS-----SMFFKVQGENLEKMFTSPMKLLLAPD 165

Query: 195 FHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVP 254
            +QSLYC LLCGLI  E++  VF+  A +LV A R  E  W EL DD++ G L+S+IT P
Sbjct: 166 INQSLYCQLLCGLIRSEDVTQVFAALAITLVEALRLLEEAWSELADDVQTGTLNSKITDP 225

Query: 255 SIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLR 314
           ++R+++S  L+PN +LA  I K+C+  + W G++  L+P  K +  I TG M  Y   +R
Sbjct: 226 TLRSSLSLCLRPNLKLAQSIRKECTADNAWCGIVERLWPKTKVIVTITTGGMAPYAPAVR 285

Query: 315 HYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFI--PQRLGNLESQV 372
            Y G +P++S DY  +E  +G N++P  PPE  +F + P   Y+EF+  PQ+L +  +  
Sbjct: 286 KYGGSVPIVSGDYVCTECVLGFNLDPFCPPESVSFTIHPEYAYYEFLHYPQKLTDGST-- 343

Query: 373 LCIEPKPVGLTEVKVGEEYEIIVTN 397
                  V L +VKVGEEYE++V+ 
Sbjct: 344 -------VKLVDVKVGEEYELVVST 361


>gi|218200236|gb|EEC82663.1| hypothetical protein OsI_27288 [Oryza sativa Indica Group]
          Length = 591

 Score =  256 bits (653), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 145/391 (37%), Positives = 220/391 (56%), Gaps = 7/391 (1%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           +EE E +T +A+  Q   L KILE N + EYL    +NG T+  +FK  VP+VT++ + P
Sbjct: 14  LEELEMLTVNAKEAQELILTKILERNQATEYLSKF-MNGSTNISAFKRHVPVVTYDKVHP 72

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNRE 133
           YI RI  G+ S IL G+ I  + RSSGT++G+P+ +P   + ++    ++       N+ 
Sbjct: 73  YILRIATGEESSILCGEYILELLRSSGTSRGEPRLMPSILKDLDRRTYLYSLIMPIMNKY 132

Query: 134 FP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFG 192
              +G+GKA+  ++   ++ T  G+   +  T+ Y+S  F      + +   SPDEVI  
Sbjct: 133 ISGLGEGKAMYLLFVKAETLTDSGIPVRSVLTSYYKSPHFLHRKHDLYNNYTSPDEVILC 192

Query: 193 PDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRIT 252
           PD  QS+YC LLCGL+ R+ +  + + FA + + +    E  W +L +DIR G L+S IT
Sbjct: 193 PDSQQSMYCQLLCGLVERQHVLRIGAVFASAFLRSISFLEQHWRDLVNDIRIGQLNSSIT 252

Query: 253 VPSIRAAMSKILK-PNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLK 311
            P+ R AM   L  PNPELAD +   CS   +W G++  L+PN KY+  ++TG+M  Y+ 
Sbjct: 253 SPACRLAMLNFLALPNPELADQVEAICS-CGSWKGILGRLWPNVKYIEAVLTGTMAQYIP 311

Query: 312 KLRHYAGD-LPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLG-NLE 369
            L  Y G  +P +   Y SSE + G N++P   P   ++ +LPN+ Y EFIP   G  L 
Sbjct: 312 MLEFYGGGAIPFVCTMYASSESYFGVNLSPLCSPADVSYTILPNMAYSEFIPLEDGLRLT 371

Query: 370 SQVLCIE-PKPVGLTEVKVGEEYEIIVTNVA 399
                IE  K V L +VKVG  YE++VT  +
Sbjct: 372 DHEEVIENDKLVSLVDVKVGCYYELVVTTFS 402


>gi|356535333|ref|XP_003536201.1| PREDICTED: putative indole-3-acetic acid-amido synthetase
           GH3.9-like [Glycine max]
          Length = 608

 Score =  255 bits (652), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 153/401 (38%), Positives = 224/401 (55%), Gaps = 15/401 (3%)

Query: 11  DELIEEFETITKDAERIQRETLRKILEENASAEYLQNL--GLNGRTDPESFKSCVPLVTH 68
           +E ++E E +T  A  +Q   L++IL +N   EYL     G    TD   FK CVP++T+
Sbjct: 11  EEALKEIERLTMKAAEVQEGLLKQILTQNRETEYLSKYMRGEKNITDVAEFKRCVPVITY 70

Query: 69  EDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYA 128
           E + PYIQRI +G+ S ++T  PIT +  SSGT+ G+PK +P   E +E    ++     
Sbjct: 71  ERIFPYIQRIANGEDSTLITSHPITEMLCSSGTSAGEPKMMPSIVEDLERRTFVYNLITP 130

Query: 129 FRNREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPD 187
             N+    + +GKA+   +   +  T  GL A T  T+ Y+S  FK       +   SPD
Sbjct: 131 IINQYVSDLDEGKAMYLYFVKAEMCTPCGLPARTVLTSYYKSKHFKCRTHDPWNDYTSPD 190

Query: 188 EVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVL 247
           + I   D +QS++C LL GL+ R  +  + + FA +L+ A    E  W  LC+DIR G L
Sbjct: 191 QTILCNDSNQSMHCQLLSGLVHRRHVLRLGAVFASALLRAISFLERNWRHLCEDIRTGQL 250

Query: 248 SSRITVPSIRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSM 306
           SS IT PS R+ MS +L  P+P LAD I + CS  S W G++ +L+P AK++  ++TGSM
Sbjct: 251 SSFITDPSCRSCMSTLLSSPDPRLADEITRICSQKS-WKGILCQLWPKAKFIEAVVTGSM 309

Query: 307 EHYLKKLRHYA-GDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRL 365
             Y+  L+HY+ G LPL+   Y SSE + G N+ P   P    F +LPN+GYFEF+P  L
Sbjct: 310 AQYVPALKHYSDGKLPLVCTMYASSECYFGVNLKPLCDPGDVAFTLLPNMGYFEFLP--L 367

Query: 366 GNLESQVLCIE-------PKPVGLTEVKVGEEYEIIVTNVA 399
           G+  + ++  +        K V L  VK+G  YE +VT  A
Sbjct: 368 GHNGTLLMDFDEGEQVPNDKLVDLVHVKLGCFYEPVVTTFA 408


>gi|15242095|ref|NP_199960.1| auxin-responsive GH3 family protein [Arabidopsis thaliana]
 gi|9758189|dbj|BAB08663.1| auxin-responsive GH3-like protein [Arabidopsis thaliana]
 gi|91807020|gb|ABE66237.1| auxin-responsive GH3 family protein [Arabidopsis thaliana]
 gi|332008705|gb|AED96088.1| auxin-responsive GH3 family protein [Arabidopsis thaliana]
          Length = 581

 Score =  255 bits (651), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 155/399 (38%), Positives = 228/399 (57%), Gaps = 26/399 (6%)

Query: 9   DVDELIEE--FETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLV 66
           D+ E ++E   E +T + ++IQ   L +IL  NA+ EYL+   L+G +  E FK  VP+V
Sbjct: 6   DLTEKLDEEILEDLTSNVKQIQDNVLEEILTLNANTEYLRRF-LHGSSSKELFKKNVPVV 64

Query: 67  THEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTS 126
           T+ED++P+I R+ +G+ S I++G PIT    SSGT+ GK K  P N++ +E         
Sbjct: 65  TYEDVKPFIDRVTNGEPSDIISGNPITGFLLSSGTSGGKQKMFPRNNKYLE------NIK 118

Query: 127 YAFRNREFPIGK-------GKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAM 179
           + F  R   I K       GK + F + + ++ T  GL +  A+T+ ++S  FK      
Sbjct: 119 FIFYYRSLVISKHIDGLEHGKGMVFNFCTSENTTPSGLPSSAASTSFFKSDYFKNRPSYW 178

Query: 180 QSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELC 239
                SPDEVI   D  Q+LYCHLLCGL+ R+++  V + F   LV A    E  W+E+C
Sbjct: 179 HWSYTSPDEVILCSDTKQTLYCHLLCGLVQRDDVVKVGAAFVTILVRAINLLENSWKEIC 238

Query: 240 DDIREGVLSSRITVPSIRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFPNAKYL 298
            +IR G LS  IT  S R ++SKIL +PNPELADLI  +C+  S W G++P L+P AK++
Sbjct: 239 TNIRFGHLSEWITDISCRDSVSKILGEPNPELADLIENECNNKS-WEGIVPRLWPKAKFI 297

Query: 299 SGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYF 358
             I TG M  ++  L  Y+  LP +S+ Y SSE   G N++P   PE  ++  LPN+ YF
Sbjct: 298 ECIATGQMAQHIPTLEFYSNKLPSISSSYVSSETMFGINMSPLCKPENVSYTFLPNLSYF 357

Query: 359 EFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN 397
           EF+    G+        + + V L +VK+G  YE +VTN
Sbjct: 358 EFLLVDAGD--------KTEIVDLVDVKLGCYYEPLVTN 388


>gi|302811215|ref|XP_002987297.1| hypothetical protein SELMODRAFT_125904 [Selaginella moellendorffii]
 gi|300144932|gb|EFJ11612.1| hypothetical protein SELMODRAFT_125904 [Selaginella moellendorffii]
          Length = 577

 Score =  254 bits (650), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 149/399 (37%), Positives = 225/399 (56%), Gaps = 12/399 (3%)

Query: 5   METVDVDELIEEF-ETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCV 63
           M T D D+ I +F   IT+D   +Q   L +IL +NA+ EY +  GL G    + FK  +
Sbjct: 1   MNTRDSDDQILDFVGDITRDVGAVQAGILEQILAKNANVEYFKRHGLCGVPSRDDFKRAM 60

Query: 64  PLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIF 123
           PL ++ D++  I R+  GD S ILT  P+  +  SSGT+ GK K  P ++     ++ + 
Sbjct: 61  PLSSYTDIESDITRMASGDDSRILTDAPVRQMLTSSGTSGGKQKLFPKSETYDIESVLMN 120

Query: 124 RTSYAFRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQC 183
           R S A  N++ PI +GK+LQFIY  K   T GG+   +  +  + S  F        S  
Sbjct: 121 RISRACLNKQIPI-QGKSLQFIYVRKPGVTPGGVVTCSGLSGYFTSPAFLNRKIDPSSGF 179

Query: 184 CSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIR 243
            SPD+V+   DF QS Y HLLCGL+   ++ ++ + FA +LV + +     W +LC DIR
Sbjct: 180 TSPDQVLLCVDFDQSSYAHLLCGLVQSTQVAVLGAPFASTLVRSMKRLSDCWRDLCQDIR 239

Query: 244 EGVLSSRITVP-SIRAAMSKILK-PNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGI 301
            G  +S I    S++ A++ +L+ PNPELAD I ++CS   NW G+I  LFPNA+ +  I
Sbjct: 240 SGKANSNIISDLSVKHAVNALLRTPNPELADAIERECSK-KNWRGIITRLFPNARVIQTI 298

Query: 302 MTGSMEHYLKKLRHYAGDLPLMSADYGSSE-GWIGANVNPSLPPELATFAVLPNIGYFEF 360
           +TGSM+ Y+  +   +G+LP+ S  Y SSE   +G N++P  PP    + + P+  Y+EF
Sbjct: 299 ITGSMQQYVPVIDFLSGELPIASPLYASSECSSLGVNLSPLSPPSPILYTIFPSFAYYEF 358

Query: 361 IPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
           +P    N  S  L      V L +V++G EYE+++TN A
Sbjct: 359 LPVNCKNSTSGDL------VELADVELGREYELVITNRA 391


>gi|302762791|ref|XP_002964817.1| hypothetical protein SELMODRAFT_31683 [Selaginella moellendorffii]
 gi|300167050|gb|EFJ33655.1| hypothetical protein SELMODRAFT_31683 [Selaginella moellendorffii]
          Length = 529

 Score =  254 bits (650), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 151/392 (38%), Positives = 220/392 (56%), Gaps = 25/392 (6%)

Query: 17  FETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQ 76
           FE   ++   +Q E L  IL +NAS  YLQ  G      P ++KS VP+V++ED+   I+
Sbjct: 1   FERACENGTSVQEELLVGILRKNASTHYLQKFG--SPQTPAAYKSQVPIVSYEDVAGEIE 58

Query: 77  RIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP- 135
           RI  GD SP+L   PI     SSGT+ GK K +P   E M  T +    S A++ R FP 
Sbjct: 59  RIASGDESPVLCQDPIICFFASSGTSSGKHKIIPVTAENMSATWRAVELSSAYKARCFPE 118

Query: 136 IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIF-GPD 194
           +G G+ L   Y   Q  TK G+  G  TT   ++       ++  S+  +P E+I  G +
Sbjct: 119 LGSGRVLGLYYCIDQFHTKAGILVGAGTTYTIKN------YRSFSSKFTTPYEMIVSGSN 172

Query: 195 FHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREG-VLSSRITV 253
           + +  YCHLLCGLI R+ ++ + S FA+++  + R  E  WEE+C+DIR G ++S ++T 
Sbjct: 173 WRELTYCHLLCGLIQRDAVEHIESMFAYTICESLRILESDWEEICNDIRTGSLISGKVTH 232

Query: 254 PSIRAAMSKILKPNPEL-----ADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEH 308
             ++ A + ++    EL     A+ I K CS  S W G++  LFP AK +S ++TG M H
Sbjct: 233 AKLQEAFASLILDYNELDRVRNAEAITKICSRKS-WSGILSLLFPRAKLVSTVVTGGMAH 291

Query: 309 YLKKLRHYAG-DLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGN 367
           ++ +LR YAG  LP+   DY SSEG +G N NP+ PPE   F +LP+I Y EF+P    N
Sbjct: 292 FVPELRDYAGVKLPISGKDYYSSEGVLGINTNPASPPEEVVFTILPHIMYHEFLPIGANN 351

Query: 368 LESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
              ++L          EV VG+EYEI++TN A
Sbjct: 352 PAGEILAPH-------EVVVGQEYEIVITNFA 376


>gi|357116086|ref|XP_003559815.1| PREDICTED: probable indole-3-acetic acid-amido synthetase
           GH3.11-like [Brachypodium distachyon]
          Length = 590

 Score =  254 bits (648), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 142/390 (36%), Positives = 220/390 (56%), Gaps = 7/390 (1%)

Query: 12  ELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDL 71
           + ++E E +T +A+  Q   L KILE N ++EYL    +NG T+  +F   VP+VT++ +
Sbjct: 12  DALQELEMLTVNAKEAQELILTKILERNQASEYLSKF-MNGSTNISTFNRNVPVVTYDVV 70

Query: 72  QPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRN 131
           QPYI RI  G+ S I+ G  I  + RSSGT++G+P+ +P   E ++    ++       N
Sbjct: 71  QPYIARISTGEDSSIICGDRIVELLRSSGTSRGEPRLMPAISEDLDRRTYLYSLLMPIMN 130

Query: 132 REFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVI 190
           +    +G+GKA+  ++   ++ T  G+   +  T+ Y+S  F      + +   SPDEVI
Sbjct: 131 KYVSGLGEGKAMYLLFVKAETLTDSGIPVRSVLTSYYKSPHFLHRKHDLYNNYTSPDEVI 190

Query: 191 FGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSR 250
             PD  QS+YC LLCGLI R  +  + + FA + + +    E  W +L +DIR G L+S 
Sbjct: 191 LCPDSQQSMYCQLLCGLIERHHVLRLGAVFASAFLRSISFLEQHWRDLVNDIRIGKLNSN 250

Query: 251 ITVPSIRAAMSKILK-PNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHY 309
           +T  + R AM   L  PNPELAD + + CS    W G++  L+PN KY+  ++TG+M  Y
Sbjct: 251 VTNNACRLAMVGFLALPNPELADELEEICS-CGPWKGILGRLWPNVKYIEAVLTGTMAQY 309

Query: 310 LKKLRHYAGD-LPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLG-- 366
           +  L  Y+G  +PL+   Y SSE + G N+ P   P   ++ +LPN+ YFEFIP   G  
Sbjct: 310 IPMLEFYSGGRIPLVCTMYASSESYFGVNLRPLCNPTDVSYTILPNMAYFEFIPLEDGLR 369

Query: 367 NLESQVLCIEPKPVGLTEVKVGEEYEIIVT 396
             + + +    K V L +VKVG  YE++VT
Sbjct: 370 VTDDEDVVENDKLVSLVDVKVGCYYELVVT 399


>gi|15227128|ref|NP_182296.1| putative indole-3-acetic acid-amido synthetase GH3.9 [Arabidopsis
           thaliana]
 gi|62900129|sp|O82243.1|GH39_ARATH RecName: Full=Putative indole-3-acetic acid-amido synthetase GH3.9;
           AltName: Full=Auxin-responsive GH3-like protein 9;
           Short=AtGH3-9
 gi|3738288|gb|AAC63630.1| putative auxin-responsive protein [Arabidopsis thaliana]
 gi|15810040|gb|AAL06947.1| At2g47750/F17A22.14 [Arabidopsis thaliana]
 gi|23308451|gb|AAN18195.1| At2g47750/F17A22.14 [Arabidopsis thaliana]
 gi|330255788|gb|AEC10882.1| putative indole-3-acetic acid-amido synthetase GH3.9 [Arabidopsis
           thaliana]
          Length = 585

 Score =  253 bits (647), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 152/402 (37%), Positives = 221/402 (54%), Gaps = 14/402 (3%)

Query: 8   VDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVT 67
           +D D +++E E IT  A  +Q   LR ILE N   EYL    +NG  D   FK  VP++ 
Sbjct: 6   LDHDSVLKELERITSKAAEVQDNILRGILERNKDTEYLSKY-MNGSKDVLEFKRAVPIII 64

Query: 68  HEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSY 127
           ++D+ PYIQRI +G+ S ++TG  IT I  SSGT+ G+PK +P   E ++    ++    
Sbjct: 65  YKDIYPYIQRIANGEDSSLITGHSITEILCSSGTSAGEPKLMPTIPEDLDRRTFLYNLII 124

Query: 128 AFRNREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSP 186
              N+    + KGKA+   +   ++ T  GL      T+ Y+S  F+       +   SP
Sbjct: 125 PIVNKYITGLDKGKAMYLNFVKAETSTPCGLPIRAVLTSYYKSKHFQCRPYDPFNDLTSP 184

Query: 187 DEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGV 246
            + I   D +QS+YC LL GLI R ++  + + FA + + A    E  W +LC+DIR G 
Sbjct: 185 IQTILCEDSNQSMYCQLLAGLIHRHKVMRLGAVFASAFLRAISYLEKKWSQLCEDIRTGS 244

Query: 247 LSSRITVPSIRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGS 305
           L+  IT P  + AMS +L  PNPELA  I + C G S+W G++ +L+P AK++  ++TGS
Sbjct: 245 LNPMITDPGCQMAMSCLLMSPNPELASEIEEIC-GRSSWKGILCQLWPKAKFIEAVVTGS 303

Query: 306 MEHYLKKLRHYA-GDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIP-Q 363
           M  Y+  L  ++ G +PL+   Y SSE + G NV P   P    F +LPN+ YFEFIP  
Sbjct: 304 MAQYIPALEFFSQGKIPLVCPMYASSETYFGVNVEPLSKPSDVVFTLLPNMCYFEFIPLG 363

Query: 364 RLGNL------ESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
           + G L      + QV C   K V L  VK+G  YE++VT  A
Sbjct: 364 KNGTLSFDLDDDEQVPC--DKVVDLVNVKLGRYYELVVTTFA 403


>gi|224068322|ref|XP_002302704.1| GH3 family protein [Populus trichocarpa]
 gi|222844430|gb|EEE81977.1| GH3 family protein [Populus trichocarpa]
          Length = 596

 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 146/394 (37%), Positives = 216/394 (54%), Gaps = 10/394 (2%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           ++E E +T+ A+ +Q   L+ IL +N   EYL    + G  D + FK  VP++T++D+ P
Sbjct: 14  LKEIERLTEKADEVQETILKAILMQNGETEYLSKY-MKGSKDVDEFKFHVPVITYKDVCP 72

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNRE 133
           YIQRI  G+ S ++TG P+T +  SSGT+ G+PK +P   E ++    ++       N+ 
Sbjct: 73  YIQRIATGEDSSLVTGHPVTEMLCSSGTSAGEPKLMPSIAEDLDRRTFVYNLIMPIMNQY 132

Query: 134 -FPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFG 192
            F + +GKA+   +   +  T  GL A T  T+ Y+S  FK   +   +   SPD+ I  
Sbjct: 133 IFGLDEGKAMFLYFIKAEMSTPCGLPARTVLTSYYKSKHFKCRTRDAFNDFTSPDQAILC 192

Query: 193 PDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRIT 252
            D +QS+YC LL GL+ R ++  + + FA + + A    E  W  LC+DIR G L   IT
Sbjct: 193 KDSNQSMYCQLLSGLVHRHQVLRLGAVFASAFLRAISFLERNWGRLCNDIRSGDLDPTIT 252

Query: 253 VPSIRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLK 311
            P  R+ MS +L  PNP LAD I   CS  S W G++  L+P AKY+  ++TGSM  Y+ 
Sbjct: 253 DPECRSCMSMLLTSPNPSLADEIEDICSNTS-WKGILCHLWPRAKYIEAVVTGSMAQYIP 311

Query: 312 KLRHYA-GDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIP-----QRL 365
            L +Y+ G LPL+   Y SSE + G N+ P   P    F +LPN+ YFEFI        L
Sbjct: 312 SLEYYSEGKLPLVCTMYASSECYFGVNLKPLCDPADVAFTLLPNMCYFEFIHLGENGTWL 371

Query: 366 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
            N + +      K V L  V++G  YE++VT  A
Sbjct: 372 VNKDEEGEVPNDKLVNLVNVRLGSYYELVVTTFA 405


>gi|302756643|ref|XP_002961745.1| hypothetical protein SELMODRAFT_31681 [Selaginella moellendorffii]
 gi|300170404|gb|EFJ37005.1| hypothetical protein SELMODRAFT_31681 [Selaginella moellendorffii]
          Length = 529

 Score =  253 bits (645), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 150/392 (38%), Positives = 220/392 (56%), Gaps = 25/392 (6%)

Query: 17  FETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQ 76
           FE   ++   +Q E L  IL +NAS +YLQ  G      P ++KS VP+V++ED+   I+
Sbjct: 1   FERACENGASVQEELLAGILRKNASTDYLQKFG--SPQTPAAYKSQVPIVSYEDVAGEIE 58

Query: 77  RIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP- 135
           RI  GD SP+L   PI     SSGT+ GK K +P   E M  T +    S A++ R FP 
Sbjct: 59  RIASGDESPVLCQDPIICFFASSGTSSGKHKIIPVTAENMSATTRAIELSSAYKARCFPE 118

Query: 136 IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIF-GPD 194
           +G G+ L   Y   Q  TK G+  G  TT   ++       +   S+  +P E+I  G +
Sbjct: 119 LGSGRVLGLYYCIDQFHTKAGILVGAGTTYTIKN------YRNFSSKFTTPYEMIVSGSN 172

Query: 195 FHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREG-VLSSRITV 253
           + +  YCHLLCGLI R+ ++ + S FA+++  + R  E  WEE+C+DIR G ++S ++T 
Sbjct: 173 WRELTYCHLLCGLIQRDAVEHIESMFAYTICESLRILESDWEEICNDIRTGSLISGKVTH 232

Query: 254 PSIRAAMSKILKPNPEL-----ADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEH 308
             ++ A ++++    EL     A+ I K CS  S W G++  LFP AK +S ++TG M H
Sbjct: 233 AKLQEAFARLILDYNELDRVRNAEAITKICSRKS-WSGILSLLFPRAKLVSTVVTGGMAH 291

Query: 309 YLKKLRHYAG-DLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGN 367
           ++ +LR YAG  LP+   DY SSEG +G N NP+ P E   F +LP+I Y EF+P    N
Sbjct: 292 FVPQLRDYAGVKLPISGKDYYSSEGVLGINTNPASPLEEVVFTILPHIMYHEFLPLGANN 351

Query: 368 LESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
              ++L          EV VG+EYEI++TN A
Sbjct: 352 PAGEILAPH-------EVVVGQEYEIVITNFA 376


>gi|15217844|ref|NP_174134.1| indole-3-acetic acid-amido synthetase GH3.17 [Arabidopsis thaliana]
 gi|62900379|sp|Q9FZ87.1|GH317_ARATH RecName: Full=Indole-3-acetic acid-amido synthetase GH3.17;
           AltName: Full=Auxin-responsive GH3-like protein 17;
           Short=AtGH3-17
 gi|9795624|gb|AAF98442.1|AC021044_21 Unknown protein [Arabidopsis thaliana]
 gi|12322991|gb|AAG51481.1|AC069471_12 unknown protein [Arabidopsis thaliana]
 gi|15450365|gb|AAK96476.1| At1g28130/F3H9_19 [Arabidopsis thaliana]
 gi|21360519|gb|AAM47375.1| At1g28130/F3H9_19 [Arabidopsis thaliana]
 gi|332192800|gb|AEE30921.1| indole-3-acetic acid-amido synthetase GH3.17 [Arabidopsis thaliana]
          Length = 609

 Score =  252 bits (644), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 149/412 (36%), Positives = 229/412 (55%), Gaps = 18/412 (4%)

Query: 1   MLEKMETVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDP--ES 58
           M+   +  D +  ++  E +T +AE IQ++ L +IL +N+  +YL+   L+G  D   +S
Sbjct: 1   MIPSYDPNDTEAGLKLLEDLTTNAEAIQQQVLHQILSQNSGTQYLRAF-LDGEADKNQQS 59

Query: 59  FKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMET 118
           FK+ VP+V ++D++P+IQRI DG+ S I++ +PIT +  SSGT+ GKPK +P   E +E 
Sbjct: 60  FKNKVPVVNYDDVKPFIQRIADGESSDIVSAQPITELLTSSGTSAGKPKLMPSTAEELER 119

Query: 119 TLQIFRTSYAFRNREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMK 177
               +       N+    + +GK +  ++   + KT  GL A    T+ Y+S  F+    
Sbjct: 120 KTFFYSMLVPIMNKYVDGLDEGKGMYLLFIKPEIKTPSGLMARPVLTSYYKSQHFRNRPF 179

Query: 178 AMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEE 237
              +   SPD+ I   D  QS+YC LLCGL+ R  +  V + FA + + A +  E  ++E
Sbjct: 180 NKYNVYTSPDQTILCQDSKQSMYCQLLCGLVQRSHVLRVGAVFASAFLRAVKFLEDHYKE 239

Query: 238 LCDDIREGVLSSRITVPSIRAAMSKILK-PNPELADLIHKKCSGLSNWYGLIPELFPNAK 296
           LC DIR G ++S IT  S R ++  IL  PN ELAD I  +C+  S W G++  ++P AK
Sbjct: 240 LCADIRTGTVTSWITDSSCRDSVLSILNGPNQELADEIESECAEKS-WEGILRRIWPKAK 298

Query: 297 YLSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIG 356
           Y+  I+TGSM  Y+  L  Y+G LPL+S  Y SSE + G N+NP   P   ++ +LPN+ 
Sbjct: 299 YVEVIVTGSMAQYIPTLEFYSGGLPLVSTMYASSECYFGINLNPLCDPADVSYTLLPNMA 358

Query: 357 YFEFIPQRLGNLESQVLCI------------EPKPVGLTEVKVGEEYEIIVT 396
           YFEF+P    + E                  E   V L  V+VG+ YEI++T
Sbjct: 359 YFEFLPVDDKSHEEIHFATHSNTDDDDDALKEDLIVNLVNVEVGQYYEIVIT 410


>gi|297845760|ref|XP_002890761.1| GH3.17 [Arabidopsis lyrata subsp. lyrata]
 gi|297336603|gb|EFH67020.1| GH3.17 [Arabidopsis lyrata subsp. lyrata]
          Length = 609

 Score =  249 bits (637), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 146/412 (35%), Positives = 228/412 (55%), Gaps = 18/412 (4%)

Query: 1   MLEKMETVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDP--ES 58
           M+   +  D +  ++  + +T +AE IQ++ L +IL +N+  +YL+   L+G +D   +S
Sbjct: 1   MIPSYDPNDTEAGLKLLDDLTTNAETIQQQVLHQILSQNSGTQYLRAF-LDGESDKNQQS 59

Query: 59  FKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMET 118
           FK+ VP+V ++D++P+IQRI DG+   I++ +PIT +  SSGT+ GKPK +P   E ++ 
Sbjct: 60  FKNKVPVVNYDDIKPFIQRIADGESYDIVSAQPITELLTSSGTSAGKPKLMPSTAEELDR 119

Query: 119 TLQIFRTSYAFRNREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMK 177
               +       N+    + +GK +  ++   + KT  GL A    T+ Y+S  F+    
Sbjct: 120 KTFFYSMLVPIMNKYVNGLDEGKGMYLLFIKPEIKTPSGLMARPVLTSYYKSQHFRNRPF 179

Query: 178 AMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEE 237
              +   SPD+ I   D  QS+YC LLCGL+ R  +  V + FA + + A +  E  ++E
Sbjct: 180 NKYNVYTSPDQTILCQDSKQSMYCQLLCGLVQRSHVLRVGAVFASAFLRAVKFLEDHYKE 239

Query: 238 LCDDIREGVLSSRITVPSIRAAMSKILK-PNPELADLIHKKCSGLSNWYGLIPELFPNAK 296
           LC DIR G ++S IT  S R ++  IL  PN ELAD I  +C+  S W G++  ++P AK
Sbjct: 240 LCADIRTGTVTSWITNSSCRDSVLSILNGPNQELADEIESECAEKS-WEGILRRIWPKAK 298

Query: 297 YLSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIG 356
           Y+  I+TGSM  Y+  L  Y+G LPL+S  Y SSE + G N+NP   P   ++ +LPN+ 
Sbjct: 299 YVEVIVTGSMAQYIPTLEFYSGGLPLVSTMYASSECYFGINLNPLCDPADVSYTLLPNMA 358

Query: 357 YFEFIP------------QRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVT 396
           YFEF+P                  +      E   V L  VKVG+ YEI++T
Sbjct: 359 YFEFLPVDDKSHEEIHFASHSNTDDDDDALKEDLIVDLVNVKVGQYYEIVIT 410


>gi|194707920|gb|ACF88044.1| unknown [Zea mays]
 gi|414887409|tpg|DAA63423.1| TPA: hypothetical protein ZEAMMB73_662398 [Zea mays]
          Length = 528

 Score =  248 bits (633), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 135/341 (39%), Positives = 199/341 (58%), Gaps = 15/341 (4%)

Query: 65  LVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLP-FNDELMETTLQIF 123
           + T+EDLQPYI+RI DGD SPIL+G P++    SSGT+ G+ K +P   DEL    L ++
Sbjct: 1   MATYEDLQPYIRRIADGDRSPILSGHPVSEFLTSSGTSAGERKLMPTIEDELNRRQL-LY 59

Query: 124 RTSYAFRNREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQ 182
                  N   P + KGKAL F++   ++KT GGL A    T+ Y+S+ FK       + 
Sbjct: 60  SLQMPVMNLYVPGMDKGKALHFLFVKSETKTPGGLAARPVLTSYYKSNHFKNRPFDAYNN 119

Query: 183 CCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDI 242
             SP   I   D  QS+Y  +LCGL  R+++  V + FA  L+ A R  +L WE+L +DI
Sbjct: 120 YTSPTAAILCADAFQSMYAQMLCGLCQRQDVLRVGAVFASGLLRAIRFLQLNWEQLAEDI 179

Query: 243 REGVLSSRITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIM 302
             G L+ R+T PS+R A++ IL+ +PELA L+  +CS   +W G+I  ++P+ KYL  I+
Sbjct: 180 EAGSLTPRVTDPSVREAVAGILRADPELAALVRSECSK-GDWAGIITRIWPSTKYLDVIV 238

Query: 303 TGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIP 362
           TG+M  Y+  L++Y+G LP+    Y SSE + G N+ P   P   ++ ++PN+ YFEF+P
Sbjct: 239 TGAMAQYIPTLKYYSGGLPMACTMYASSECYFGLNLRPMCDPSEVSYTLMPNMCYFEFLP 298

Query: 363 Q----RLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
                  G   SQ+       V L  V+VG EYE+++T  A
Sbjct: 299 MDSAAASGGDASQL-------VDLARVEVGREYELVITTYA 332


>gi|302788877|ref|XP_002976207.1| hypothetical protein SELMODRAFT_416246 [Selaginella moellendorffii]
 gi|300155837|gb|EFJ22467.1| hypothetical protein SELMODRAFT_416246 [Selaginella moellendorffii]
          Length = 554

 Score =  248 bits (633), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 141/391 (36%), Positives = 221/391 (56%), Gaps = 23/391 (5%)

Query: 10  VDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHE 69
           ++ LI EFE + ++A  +Q E L  I+E NAS E+LQ+  +   TD +SFK+ VP+V +E
Sbjct: 1   MEALINEFEDMCRNAAAVQEEVLGNIVEHNASCEFLQSYNV---TDVDSFKAHVPVVGYE 57

Query: 70  DLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMET-TLQIFRTSYA 128
           D+   IQR+ DGD + IL   P+     SSGTT  K    P   +  +     +++ + A
Sbjct: 58  DIAAKIQRMADGDPASILCKDPVIAFISSSGTTTEKRNAFPLTTKSCDVKNHAMYKIAAA 117

Query: 129 FRNREFPIGK-GKALQFIYGSK-QSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSP 186
           +  R+FP+G    AL F+Y     + +K G+     +   + S  +K       S+  SP
Sbjct: 118 YIERDFPVGSFPTALAFMYALPCGTLSKSGIPIMPVSNFAFTSQAYKER----PSRSTSP 173

Query: 187 DEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGV 246
           DEVI+GP + +S YCH+LCGLI R E+  + S FA++LV+AF   E+ W  LC DIR G 
Sbjct: 174 DEVIWGP-WWESTYCHMLCGLIQRMEVDYIISFFAYTLVYAFNMLEVEWRNLCHDIRTGK 232

Query: 247 LSSRITVPSIRAAMSKILKPNPELADLIHKKCSGLSNW-YGLIPELFPNAKYLSGIMTGS 305
           L  R+    +RAA++ +L  +P+ A  I + CS   +W  G++P+L+P AKYL  ++TG 
Sbjct: 233 LDERVKDVKLRAAVAGVLHEDPDSAGFIEEVCSSKESWDQGIVPQLWPKAKYLHTVVTGG 292

Query: 306 MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRL 365
           M+ Y+  LR YAG + ++   Y  SEG  G N++P+   E   F ++P   Y EF+  R 
Sbjct: 293 MKPYVPALRKYAGGVHIIGKAYIGSEGVYGINMDPTTEAENVVFTLVPTTLYMEFLRLR- 351

Query: 366 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVT 396
                     + K V  + +++GE+YE+++T
Sbjct: 352 ----------DNKLVDSSNLEIGEQYELVIT 372


>gi|242068645|ref|XP_002449599.1| hypothetical protein SORBIDRAFT_05g019810 [Sorghum bicolor]
 gi|241935442|gb|EES08587.1| hypothetical protein SORBIDRAFT_05g019810 [Sorghum bicolor]
          Length = 668

 Score =  247 bits (630), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 144/395 (36%), Positives = 222/395 (56%), Gaps = 14/395 (3%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNL---GLNGRTDPE---SFKSCVPLVT 67
           ++  E +T  A  IQ+  LR+IL  NA  +YL+     G  GR   E   +FK  VP+V 
Sbjct: 59  LQLIEDLTTHAGAIQQRVLREILAMNAGTDYLRGFLGAGAEGRDADELAATFKDRVPVVE 118

Query: 68  HEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSY 127
           +ED++PYI+RI +G  S +++ K IT +  SSGT+ G+PK +P  +E ++    ++    
Sbjct: 119 YEDVKPYIERIANGAPSSLISSKTITELLTSSGTSGGQPKLMPSTEEELDRKTFLYNLLV 178

Query: 128 AFRNREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSP 186
              N+    + KG+ +  ++   +  T  GL A    T+ Y+S  F+    +  ++  SP
Sbjct: 179 PVMNKYVEGLDKGRCMYLLFVKPEITTASGLVARPVLTSYYKSRHFRERPDSPYTRYTSP 238

Query: 187 DEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREG- 245
           +E I  PD  QS+Y  LLCGL  R E+  V + FA + + A +  E  W  LCDDIR G 
Sbjct: 239 NEAILCPDSAQSMYAQLLCGLARRGEVLRVGAVFASAFLRAVKFLEAHWRALCDDIRAGR 298

Query: 246 VLSSRITVPSIRAAMSKIL-KPNPELADLIHKKCSGLSN--WYGLIPELFPNAKYLSGIM 302
           V +SR+T  + R A+++++ +P+P LAD I  +C G S+  W G++  L+P  KY+  I+
Sbjct: 299 VDASRVTDAACRDAVARVVARPDPALADAIAAECEGSSSSSWRGIVRRLWPRTKYIDVIV 358

Query: 303 TGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIP 362
           TGSM  Y+  L  Y G LPL+S  Y SSE + G N+ P  PPE   + +LPN+ Y+EFI 
Sbjct: 359 TGSMAQYIPLLEFYGGGLPLVSTMYASSECYFGINLRPLDPPEDVAYTLLPNMCYYEFIK 418

Query: 363 QRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN 397
                 E++    + K V L +V+ G  YE++VT 
Sbjct: 419 VEKDGEEARE---DGKVVDLVDVEAGGYYELLVTT 450


>gi|297828495|ref|XP_002882130.1| auxin-responsive GH3 family protein [Arabidopsis lyrata subsp.
           lyrata]
 gi|297327969|gb|EFH58389.1| auxin-responsive GH3 family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 589

 Score =  246 bits (629), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 150/396 (37%), Positives = 215/396 (54%), Gaps = 14/396 (3%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           + E E IT  A  +Q   L  ILE N   EYL    + G  D   FK  VP++T++D+ P
Sbjct: 16  LTELERITSKAAEVQDNILCGILERNKDTEYLSKY-MKGSKDVVEFKRSVPIITYKDIYP 74

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNRE 133
           YIQRI +G+ S ++TG PIT I  SSGT+ G+PK +P   E ++    ++       N+ 
Sbjct: 75  YIQRIANGEDSSLITGHPITEILCSSGTSAGEPKLMPTISEDLDRRTFLYNLIIPIVNKY 134

Query: 134 FP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFG 192
            P + KGKA+   +   ++ T  GL      T+ Y+S  F+       +   SP + I  
Sbjct: 135 IPGLDKGKAMYLNFVKAETSTPCGLPIRAVLTSYYKSKHFQCRPYDPFNDLTSPIQTILC 194

Query: 193 PDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRIT 252
            D +QS+YC LL GLI R ++  + + FA + + A    E  W +LC+DIR G L+  IT
Sbjct: 195 EDSNQSMYCQLLAGLIHRHKVMRLGAVFASAFLRAISYLEKKWSQLCEDIRTGRLNPMIT 254

Query: 253 VPSIRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLK 311
            P  + AMS +L  P+PELA  I + CS  S+W G++  L+P AK++  ++TGSM  Y+ 
Sbjct: 255 DPGCQIAMSCLLTSPDPELASEIEEICSR-SSWKGILCHLWPRAKFIEAVVTGSMAQYIP 313

Query: 312 KLRHYA-GDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIP-QRLGNL- 368
            L  +  G +PL+   Y SSE + G NV P   P    F +LPN+ YFEFIP  + G L 
Sbjct: 314 ALEFFGQGKIPLVCPMYASSETYFGVNVEPLSKPSDVVFTLLPNMCYFEFIPLGKNGALS 373

Query: 369 -----ESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
                + QV C   K V L  VK+G  YE++VT  A
Sbjct: 374 FDLDDDEQVPC--DKVVDLVNVKLGRYYELVVTTFA 407


>gi|15240608|ref|NP_196839.1| auxin-responsive GH3 family protein [Arabidopsis thaliana]
 gi|7529290|emb|CAB86642.1| auxin-responsive-like protein [Arabidopsis thaliana]
 gi|91806856|gb|ABE66155.1| auxin-responsive GH3 family protein [Arabidopsis thaliana]
 gi|332004500|gb|AED91883.1| auxin-responsive GH3 family protein [Arabidopsis thaliana]
          Length = 587

 Score =  246 bits (629), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 146/404 (36%), Positives = 224/404 (55%), Gaps = 10/404 (2%)

Query: 1   MLEKMETVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFK 60
           ML K +  D    +   E +T +  +IQ   L  +L  NA  EYL+   LNG+ D ++FK
Sbjct: 1   MLPKFDLTDPKASLSLLEDVTTNVTQIQDSILEAVLSRNAHTEYLKGF-LNGQVDKQTFK 59

Query: 61  SCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTL 120
             VP+VT+ED++PYI RI +G+ S ++  +PI+ +  SSGTT G    +P   E  E  +
Sbjct: 60  KNVPIVTYEDIKPYINRIANGEASDLICDRPISLLVMSSGTTAGIQNLIPLTTEDGEQRI 119

Query: 121 ---QIFRTSYAFRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMK 177
               ++R S  ++  E  I +GK+L F + + + +T  G+   T  T + +S   K    
Sbjct: 120 MFGSLYR-SLLYKYVE-GIREGKSLTFYFVNPERETASGILIRTMITCILKSVN-KTNSS 176

Query: 178 AMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEE 237
                  SP E+    D  QS+YC LLCGL+ R+ +  + + FA   +   +  E  W+E
Sbjct: 177 LWDRLQISPHEISTCEDTTQSMYCQLLCGLLQRDNVARLGAPFASVFIRVIKYLEGHWQE 236

Query: 238 LCDDIREGVLSSRITVPSIRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFPNAK 296
           LC +IR G LS  IT P   + +SK L  PNP+LA LI ++CS  S W  ++  L+P AK
Sbjct: 237 LCSNIRTGRLSDWITDPQCVSGISKFLTAPNPDLASLIEQECSKTS-WEAIVKRLWPKAK 295

Query: 297 YLSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIG 356
            +  ++TGSM  Y+  L  Y G LPL+S+ YGSSE ++G NVNP   P   ++ ++P++ 
Sbjct: 296 CVEAVVTGSMAQYIPLLEFYGGGLPLISSWYGSSECFMGVNVNPLCKPSDVSYTIIPSMA 355

Query: 357 YFEFIPQRLGNLESQVLCIEPK-PVGLTEVKVGEEYEIIVTNVA 399
           YFEF+  +    E+ +  IE    V L +VK+G +YE +VT  +
Sbjct: 356 YFEFLEVKKDQQEAGLDPIENHVVVDLVDVKIGHDYEPVVTTFS 399


>gi|297807363|ref|XP_002871565.1| hypothetical protein ARALYDRAFT_909291 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297317402|gb|EFH47824.1| hypothetical protein ARALYDRAFT_909291 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1000

 Score =  246 bits (628), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 150/407 (36%), Positives = 225/407 (55%), Gaps = 16/407 (3%)

Query: 1   MLEKMETVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFK 60
           ML K +  D    +   E +T + ++IQ   L  IL  NA  EYL    LNG+ D +SFK
Sbjct: 1   MLPKFDPTDQKACLSLLEDLTTNVKQIQDSILEAILSRNARTEYLSGF-LNGQVDKQSFK 59

Query: 61  SCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTL 120
           + VP+VT+ED++PYI RI +G+ S ++  +PI+ +  SSGT+ G PK +P   E +E  +
Sbjct: 60  NNVPVVTYEDIRPYIDRIANGEPSDLICDRPISVLLTSSGTSGGVPKLIPLTTEDLEQRM 119

Query: 121 QIFRTSYA-FRNREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKA 178
             F + YA   N+    + +GK+L F + +++SKT  GL   T  T+  +S    +    
Sbjct: 120 S-FSSLYAPLLNKHIDGLSEGKSLIFYFVTRESKTANGLMVRTMVTSFLKSIKPTSSFLW 178

Query: 179 MQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEEL 238
            + Q  SP  +    D  QS+YC LLCGL+ R+ +  + + FA S +   +  E  W EL
Sbjct: 179 DRLQI-SPHAITTCADTTQSMYCQLLCGLLERDNVARLGAPFASSFLKVIKFLEDHWPEL 237

Query: 239 CDDIREGVLSSRITVPSIRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFPNAKY 297
           C +IR G LS  IT       + K L  PNPELA LI ++CS  S W  ++  L+P AK 
Sbjct: 238 CSNIRTGRLSDWITDAQCTLGIGKFLTAPNPELASLIEQECSKKS-WEAVLRRLWPKAKC 296

Query: 298 LSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGY 357
           +  I+TG+M  Y+  L  Y+G LPL S+ YGSSE ++G N NP   P   ++ ++P +GY
Sbjct: 297 IETIITGTMAQYIPLLEFYSGGLPLTSSFYGSSECFMGVNFNPLCKPCDVSYTIIPCMGY 356

Query: 358 FEFIP-----QRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
           FEF+      Q  G+  +    +    V L +VK+G +YE +VT  +
Sbjct: 357 FEFLEVEKDHQEAGHDPTAKTVV----VDLVDVKIGHDYEPVVTTFS 399



 Score =  234 bits (596), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 143/403 (35%), Positives = 230/403 (57%), Gaps = 9/403 (2%)

Query: 1   MLEKMETVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFK 60
           ML K +  ++   +   E +T +  +IQ   L  IL  NA  EYL+   LNG+ D +SFK
Sbjct: 407 MLPKFDPTNLLATMSVLEDVTTNVNKIQDSVLEAILSRNAQTEYLRGF-LNGQLDKQSFK 465

Query: 61  SCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTL 120
             +P+VT+E ++P+I RI +G+ S ++  + I+ +  ++GT+ G PK +P   E +E  +
Sbjct: 466 KNLPIVTYEVIKPHIDRIANGEPSDLICDRHISLLLATTGTSGGIPKLIPLTAEELEQRI 525

Query: 121 QIFRTSYA---FRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMK 177
            +F   YA   F++ E  + +GK+L F + +++S+T  GL      T V +S        
Sbjct: 526 -LFGFLYAPLVFKHIE-GLTQGKSLMFYFVTRESETASGLMVRFMITCVLKSVNPTNSFL 583

Query: 178 AMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEE 237
             + Q  SP  +    D +Q++YC LLCGL+ RE +  + + +A S +   +  E  W E
Sbjct: 584 WDRVQI-SPHAIAICEDTNQAMYCQLLCGLLQRENVARLGAPYASSFLKVIKFLEDHWHE 642

Query: 238 LCDDIREGVLSSRITVPSIRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFPNAK 296
           LC +IR G LS  IT     + +SK L  PNP+LA+LI ++CS  S W  ++  L+P AK
Sbjct: 643 LCSNIRTGRLSDWITDAQCVSGISKFLTAPNPDLANLIEQECSKTS-WEAILRRLWPKAK 701

Query: 297 YLSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIG 356
            +  ++TG+M  Y+  L  Y G LPL+S+ YGSSE +IG N+NP   P   ++ ++P++G
Sbjct: 702 CIEAVITGTMAQYIPLLEFYGGGLPLVSSWYGSSECFIGINLNPLSKPSDVSYTIIPSMG 761

Query: 357 YFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
           YFEFI       E+  +  +P  V L +VK+G +YE++VT  +
Sbjct: 762 YFEFIEVVKDRQEAGHVPADPVVVDLVDVKIGHDYELLVTTFS 804


>gi|30684377|ref|NP_196841.2| auxin-responsive GH3 family protein [Arabidopsis thaliana]
 gi|26449584|dbj|BAC41918.1| putative auxin responsive protein [Arabidopsis thaliana]
 gi|29028956|gb|AAO64857.1| At5g13370 [Arabidopsis thaliana]
 gi|332004504|gb|AED91887.1| auxin-responsive GH3 family protein [Arabidopsis thaliana]
          Length = 595

 Score =  246 bits (628), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 147/404 (36%), Positives = 227/404 (56%), Gaps = 10/404 (2%)

Query: 1   MLEKMETVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFK 60
           ML K +  +    +   E +T + ++IQ   L  IL  NA  EYL+   LNG+ D ++FK
Sbjct: 1   MLPKFDPTNQKACLSLLEDLTTNVKQIQDSVLEAILSRNAQTEYLRGF-LNGQVDKQNFK 59

Query: 61  SCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTL 120
             VP+VT+ED++ YI RI +G+ S ++  +PI+ +  SSGT+ G PK +P   E +E  +
Sbjct: 60  KNVPVVTYEDIRSYIDRIANGEPSDLICDRPISVLLTSSGTSGGVPKLIPLTTEDLEQRI 119

Query: 121 QIFRTSYA---FRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMK 177
             F + YA   +++ +  + +GK+L F + +++SKT  GL   T  T+  +S   +    
Sbjct: 120 S-FSSLYAPLLYKHID-GLSEGKSLIFYFVTRESKTANGLMVRTMVTSFLKSIK-QTNSF 176

Query: 178 AMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEE 237
              S   SP  +    D  QS+YC LLCGL+ R+ +  + + FA S +   +  E  W E
Sbjct: 177 LWDSLQVSPHAITTCADTTQSMYCQLLCGLLERDNVARLGAPFASSFLKVIKFLEDHWPE 236

Query: 238 LCDDIREGVLSSRITVPSIRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFPNAK 296
           LC +IR G LS  IT  +  + + K L  PNPELA LI ++CS  S W  ++  L+P AK
Sbjct: 237 LCSNIRTGRLSDWITDATCTSGIGKFLTAPNPELASLIEQECSKTS-WEAILKRLWPKAK 295

Query: 297 YLSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIG 356
            +  I+TG+M  Y+  L  Y+G LPL S+ YGSSE ++G N NP   P   ++ ++P +G
Sbjct: 296 CIESIITGTMAQYIPLLEFYSGGLPLTSSFYGSSECFMGVNFNPLCKPSDVSYTIIPCMG 355

Query: 357 YFEFIPQRLGNLESQVLCIE-PKPVGLTEVKVGEEYEIIVTNVA 399
           YFEF+     + E+     E P  V L +VK+G +YE +VT  +
Sbjct: 356 YFEFLEVEKDHQEAGHDPTEKPVVVDLVDVKIGHDYEPVVTTFS 399


>gi|15240613|ref|NP_196840.1| auxin-responsive GH3 family protein [Arabidopsis thaliana]
 gi|79327769|ref|NP_001031874.1| auxin-responsive GH3 family protein [Arabidopsis thaliana]
 gi|7543903|emb|CAB87143.1| auxin reponsive-like protein [Arabidopsis thaliana]
 gi|62320482|dbj|BAD95006.1| auxin reponsive - like protein [Arabidopsis thaliana]
 gi|332004501|gb|AED91884.1| auxin-responsive GH3 family protein [Arabidopsis thaliana]
 gi|332004502|gb|AED91885.1| auxin-responsive GH3 family protein [Arabidopsis thaliana]
          Length = 594

 Score =  244 bits (623), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 148/406 (36%), Positives = 215/406 (52%), Gaps = 15/406 (3%)

Query: 1   MLEKMETVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFK 60
           ML K +  D    +   E +T + ++IQ   L  IL  NA  EYL    LNG+ D +SFK
Sbjct: 1   MLPKFDPTDQKACLSLLEDVTTNVKQIQDSVLEAILSRNAHTEYLSGF-LNGQADKKSFK 59

Query: 61  SCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTL 120
             VP+VT+ED++PYI RI +G+ S ++  +PI+ +  SSGT+ G PK +P   E +E   
Sbjct: 60  KNVPVVTYEDIKPYIDRIANGEPSDLICDRPISVLLTSSGTSGGVPKLIPLTTEELEQ-- 117

Query: 121 QIFRTSYAFRNREF------PIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKA 174
              R S+A   R         I + K+    + +++S+T  G+   T  T V +S T   
Sbjct: 118 ---RISFASLYRPLLYKYIEGIRERKSFMLYFVTRESETASGILVRTMITCVLKSVTPAN 174

Query: 175 EMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELV 234
                QSQ  SP  +    D  QS+YC LLCGL+ R+ +  + + FA S +   +  E  
Sbjct: 175 SFIWDQSQI-SPHAITTCSDTTQSMYCQLLCGLLQRDNVGRLGAPFASSFLKIIKFLEDH 233

Query: 235 WEELCDDIREGVLSSRITVPSIRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFP 293
           W E C +IR G LS  IT P   + + K L  PNPELA LI ++CS  S W  ++  L+P
Sbjct: 234 WPEFCSNIRTGCLSDWITDPQCVSGIGKFLTAPNPELASLIEQECSQTS-WEAIVKRLWP 292

Query: 294 NAKYLSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLP 353
            AK +  I+TG+M  Y   L  Y+G LP++S  YGSSE + G N+NP   P   ++ ++P
Sbjct: 293 KAKCIEAIVTGTMAQYNPLLEFYSGGLPVISTFYGSSECFFGLNLNPLSKPNEVSYTIIP 352

Query: 354 NIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
            + YFEF+               P  V L +VK+G +YE +VT  A
Sbjct: 353 CMAYFEFLEVEKDYESGHDPAENPVVVDLVDVKIGHDYEPVVTTFA 398


>gi|334187658|ref|NP_001190301.1| auxin-responsive GH3 family protein [Arabidopsis thaliana]
 gi|332004503|gb|AED91886.1| auxin-responsive GH3 family protein [Arabidopsis thaliana]
          Length = 672

 Score =  244 bits (623), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 148/406 (36%), Positives = 215/406 (52%), Gaps = 15/406 (3%)

Query: 1   MLEKMETVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFK 60
           ML K +  D    +   E +T + ++IQ   L  IL  NA  EYL    LNG+ D +SFK
Sbjct: 79  MLPKFDPTDQKACLSLLEDVTTNVKQIQDSVLEAILSRNAHTEYLSGF-LNGQADKKSFK 137

Query: 61  SCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTL 120
             VP+VT+ED++PYI RI +G+ S ++  +PI+ +  SSGT+ G PK +P   E +E   
Sbjct: 138 KNVPVVTYEDIKPYIDRIANGEPSDLICDRPISVLLTSSGTSGGVPKLIPLTTEELEQ-- 195

Query: 121 QIFRTSYAFRNREF------PIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKA 174
              R S+A   R         I + K+    + +++S+T  G+   T  T V +S T   
Sbjct: 196 ---RISFASLYRPLLYKYIEGIRERKSFMLYFVTRESETASGILVRTMITCVLKSVTPAN 252

Query: 175 EMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELV 234
                QSQ  SP  +    D  QS+YC LLCGL+ R+ +  + + FA S +   +  E  
Sbjct: 253 SFIWDQSQI-SPHAITTCSDTTQSMYCQLLCGLLQRDNVGRLGAPFASSFLKIIKFLEDH 311

Query: 235 WEELCDDIREGVLSSRITVPSIRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFP 293
           W E C +IR G LS  IT P   + + K L  PNPELA LI ++CS  S W  ++  L+P
Sbjct: 312 WPEFCSNIRTGCLSDWITDPQCVSGIGKFLTAPNPELASLIEQECSQTS-WEAIVKRLWP 370

Query: 294 NAKYLSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLP 353
            AK +  I+TG+M  Y   L  Y+G LP++S  YGSSE + G N+NP   P   ++ ++P
Sbjct: 371 KAKCIEAIVTGTMAQYNPLLEFYSGGLPVISTFYGSSECFFGLNLNPLSKPNEVSYTIIP 430

Query: 354 NIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
            + YFEF+               P  V L +VK+G +YE +VT  A
Sbjct: 431 CMAYFEFLEVEKDYESGHDPAENPVVVDLVDVKIGHDYEPVVTTFA 476


>gi|302754800|ref|XP_002960824.1| hypothetical protein SELMODRAFT_163668 [Selaginella moellendorffii]
 gi|300171763|gb|EFJ38363.1| hypothetical protein SELMODRAFT_163668 [Selaginella moellendorffii]
          Length = 578

 Score =  244 bits (622), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 142/388 (36%), Positives = 213/388 (54%), Gaps = 7/388 (1%)

Query: 13  LIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQ 72
           L+E+ E+ +      Q + L +ILE+NA+ +Y    GL   T  E F+   P++ +ED++
Sbjct: 7   LLEKLESSSWSPGEAQDKVLAEILEKNAATDYFNRHGLRAATK-EVFRQRAPVIEYEDIK 65

Query: 73  PYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNR 132
             I RI DG+ S +L   PI  +  SSGT+ G  K  P  +     +   F  + A  NR
Sbjct: 66  DEINRIADGEASTLLCANPIADMFTSSGTSGGAHKLFPKVEGHYAVSKYFFDLATALLNR 125

Query: 133 EFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIF 191
           + P +  GKAL F+Y     KT GGL A  A T  Y S  F+       +   SP EVI 
Sbjct: 126 DLPGLRTGKALYFLYVRSGRKTPGGLPAYPALTGYYNSLEFRNRPFDPSNDYTSPMEVIL 185

Query: 192 GPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRI 251
             D  Q+ YCHLLCGLI   ++  +   FA +LV + R  E  W+EL  DIR G LS R+
Sbjct: 186 CTDSVQASYCHLLCGLIHARDVTKLGCFFASALVRSIRCLEAWWQELSRDIRTGTLSERV 245

Query: 252 TVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLK 311
             P+ R A+ KIL+P+PELA++I + CS   +  G++ +L+P+AK +  ++TG+ME Y+ 
Sbjct: 246 VDPACREAVEKILRPDPELANVIDEACSS-GSLKGIVRKLWPSAKAIDTVVTGAMEQYVG 304

Query: 312 KLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQ 371
           ++ +    LP+ S  Y SSE + G N+ P   P   ++  LP   Y+EF+P  +   E +
Sbjct: 305 EVDYLTDGLPIASMIYASSESFFGVNLKPLCEPSQISYMFLPETSYYEFLP--VARSEEK 362

Query: 372 VLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
           V     +PV L +V+ G EYE+++T  A
Sbjct: 363 V--SREEPVELVDVEQGHEYELVITTNA 388


>gi|297807359|ref|XP_002871563.1| auxin-responsive GH3 family protein [Arabidopsis lyrata subsp.
           lyrata]
 gi|297317400|gb|EFH47822.1| auxin-responsive GH3 family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 587

 Score =  242 bits (618), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 148/405 (36%), Positives = 224/405 (55%), Gaps = 12/405 (2%)

Query: 1   MLEKMETVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFK 60
           ML K +  D    +   E +T + ++IQ   L  +L  NA  EYL+ + LNG+ D +SFK
Sbjct: 1   MLPKFDLTDPKASLSLLEDVTTNVKQIQDSILEAVLSRNAHTEYLKGI-LNGQVDKQSFK 59

Query: 61  SCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTL 120
             VP+VT+ED++PYI RI +G+ S ++  +PI+    SSGT+ G    +P   E  E   
Sbjct: 60  KNVPVVTYEDIKPYIGRIANGEASDLICDRPISLFVMSSGTSGGIQNLIPLTTE--EGEQ 117

Query: 121 QIFRTSYAFRNREFP----IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEM 176
           +IF  S  +R+  +     I +GKAL F + + +S+T+ G+   T  T + +S   K   
Sbjct: 118 RIFFGSL-YRSLLYKYVEGIREGKALTFYFVNPESETRSGILVRTMITCILKSVN-KTNS 175

Query: 177 KAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWE 236
                   SP E+    D  QS+YC LLCGL+ R+ +  + + FA   +   +  E  W+
Sbjct: 176 SLWDRLQISPHEISTCEDTTQSMYCQLLCGLLQRDNVARLGAPFASVFLRVIKFLEDHWQ 235

Query: 237 ELCDDIREGVLSSRITVPSIRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFPNA 295
           ELC +IR G LS  IT     + + K L  PNP+LA LI ++CS  S W  ++  L+  A
Sbjct: 236 ELCSNIRTGRLSDWITDAQCVSGIGKFLTAPNPDLASLIEQECSKPS-WEAIVKRLWRKA 294

Query: 296 KYLSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNI 355
           K +  ++TGSM  Y+  L  Y G LPL+S+ YGSSE +IG NVNP   P   ++ ++P++
Sbjct: 295 KCVEAVVTGSMAQYIPLLEFYGGGLPLISSWYGSSECFIGVNVNPLCKPSDVSYTIIPSM 354

Query: 356 GYFEFIPQRLGNLESQVLCIEPK-PVGLTEVKVGEEYEIIVTNVA 399
           GYFEF+  +    E+    IE    V L +VK+G +YE +VT  +
Sbjct: 355 GYFEFLEVKKDQKEAGRDPIENHVVVDLVDVKIGHDYEPVVTTFS 399


>gi|125572133|gb|EAZ13648.1| hypothetical protein OsJ_03565 [Oryza sativa Japonica Group]
          Length = 551

 Score =  242 bits (617), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 132/335 (39%), Positives = 193/335 (57%), Gaps = 3/335 (0%)

Query: 12  ELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDL 71
           E +E  E +T+  + +Q   L  IL  N  AEYL+  G+ GRTD E+FK+ VP+VT+EDL
Sbjct: 31  EKLEFIEEMTRGFDAVQERVLAAILARNNGAEYLRRHGMEGRTDREAFKARVPVVTYEDL 90

Query: 72  QPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRN 131
           +P I+RI +GD S I++  PIT    SSGT+ G+ K +P  ++ ++    ++       N
Sbjct: 91  RPEIERIANGDRSNIISSHPITEFLTSSGTSAGERKLMPTIEDELDRRQMLYSLLMPVMN 150

Query: 132 REFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVI 190
              P + KGK L F++   ++KT GGL A    T+ Y+S  FK       +   SP   I
Sbjct: 151 LYVPGLDKGKGLYFLFIKSETKTPGGLPARPVLTSYYKSDHFKHRPFDPYNVYTSPTAAI 210

Query: 191 FGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSR 250
              D  QS+Y  +LCGL+ R E+  V + FA  L+ A R  +L W EL  DIR G LS++
Sbjct: 211 LCTDAFQSMYAQMLCGLVARAEVLRVGAVFASGLLRAIRFLQLHWRELAHDIRTGTLSAK 270

Query: 251 ITVPSIRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHY 309
           +T PSIR A++++L  P+ ELA  +  +C G   W G+I  ++PN KYL  I+TG+M  Y
Sbjct: 271 VTEPSIRDAVAEVLAAPDAELAAFVEAEC-GKDKWEGIITRMWPNTKYLDVIVTGAMAQY 329

Query: 310 LKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPP 344
           +  L+ Y+G LP+    Y SSE + G N+ P   P
Sbjct: 330 IPTLKFYSGGLPMACTMYASSECYFGLNLRPMCEP 364


>gi|302808608|ref|XP_002985998.1| hypothetical protein SELMODRAFT_21596 [Selaginella moellendorffii]
 gi|300146146|gb|EFJ12817.1| hypothetical protein SELMODRAFT_21596 [Selaginella moellendorffii]
          Length = 553

 Score =  241 bits (616), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 156/395 (39%), Positives = 225/395 (56%), Gaps = 26/395 (6%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           I EFE   K+A  IQ E L  IL +NA  EYLQ  G        +FKS VP++ ++D++ 
Sbjct: 1   IAEFEDACKNAASIQEELLLGILRKNACCEYLQKYG--SPLTVAAFKSQVPVIGYDDIRS 58

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNRE 133
            ++RI DGD   IL   PIT+   SSGT+ GK K +P   E   + +++  +SYA++   
Sbjct: 59  DLERIADGDRGQILCHDPITSFFTSSGTSSGKNKNIPATYENTVSVVKVLESSYAYKTNY 118

Query: 134 FPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGP 193
           F +GKG+++  +Y      TK GL  G  T +  RS+ F+   +  +S   +P EV+   
Sbjct: 119 FDLGKGRSVSLLYFKDLHATKSGLVFGPVTAHGIRSTRFR---QVWRSSRTTPYEVLVAA 175

Query: 194 -DFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFE-LVWEELCDDIREGVLS-SR 250
            DF +  YCHLLC L+ R E++ V   +A+S+  A R F+   WEELC+DIR   LS ++
Sbjct: 176 SDFRELTYCHLLCALLQRHEVEQVECMYAYSICEALRLFQNEYWEELCNDIRTASLSKTK 235

Query: 251 ITVPSIRAAMSK--ILKP---NPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGS 305
           +T P +R A  +  + +    N   AD I K CS  S W G++P LFP AK +S ++TG+
Sbjct: 236 VTDPKLRKAFERAGVFRSKCGNAMEADKIFKICSNES-WSGILPLLFPKAKLVSAVVTGA 294

Query: 306 MEHYLKKLRHYAGD-LPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQR 364
           M HY+  L  YAGD LP++   + SSEG IG N++P  PPE   + V P   Y+EF+P  
Sbjct: 295 MTHYVPTLSFYAGDQLPIVGQGFFSSEGGIGINIDPLSPPEGVIYTVTPRSLYYEFLP-- 352

Query: 365 LGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
           LG  E+         + + EV +GE YEI+VTN A
Sbjct: 353 LGATEA---------LSMHEVVIGELYEILVTNFA 378


>gi|357152113|ref|XP_003576014.1| PREDICTED: indole-3-acetic acid-amido synthetase GH3.17-like
           [Brachypodium distachyon]
          Length = 649

 Score =  241 bits (615), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 142/408 (34%), Positives = 222/408 (54%), Gaps = 14/408 (3%)

Query: 1   MLEKMETVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQN-LGLNGRTDPES- 58
           M+   +  D    ++  E +T  A  +QR  LR+IL  N+  +YL+  LG++   D ++ 
Sbjct: 22  MIPACDPQDGPACMKLIEDLTTHAGAVQRRVLREILARNSRTDYLRGFLGVDADADADAE 81

Query: 59  -----FKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFND 113
                F+  VP+V +ED++PYI+RI +G  S ++   PIT +  SSGT+ G+PK +P  +
Sbjct: 82  RGAAFFRERVPVVEYEDVKPYIERIANGAPSSLICAAPITELLTSSGTSGGQPKLMPATE 141

Query: 114 ELMETTLQIFRTSYAFRNREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTF 172
           E ++    ++       N   P + +G+ +  ++   +  T  GL A    T+ Y+S  F
Sbjct: 142 EELDRKTFMYSLLVPLMNAHVPGLDQGRGMYLLFVKPEITTPSGLVARPVLTSYYKSRHF 201

Query: 173 KAEMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFE 232
           +    +  ++  SPDE I  PD  QS+Y  LLCGL  R E+    + FA + + A +  E
Sbjct: 202 RNRPDSPYTRYTSPDEAILCPDSQQSMYAQLLCGLSRRGEVLRAGAVFASAFLRAIKFLE 261

Query: 233 LVWEELCDDIREGVLSSRITVPSIRAAMSKILK-PNPELADLIHKKCSGLSNWYGLIPEL 291
             W  LC DIR G  +SR+  P+    +SK++  P+P LAD I  +CSG S+W G++  L
Sbjct: 262 AHWRALCADIRAGQSASRVHDPACLEGVSKVVAMPDPALADAIEAECSG-SSWRGIVRRL 320

Query: 292 FPNAKYLSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAV 351
           +P  KY+  ++TGSM  Y+  L  Y G LPL+S  Y SSE + G N+ P   PE   + +
Sbjct: 321 WPRCKYIDVVVTGSMAQYVPMLEFYGGGLPLVSTMYASSECFFGINLRPLDRPEDVAYTL 380

Query: 352 LPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
           LPN+ Y+EFI       E +    E + VGL  V++G  YE++VT  A
Sbjct: 381 LPNMCYYEFIEVEKDGEEVR----EGEMVGLVGVRLGCYYELVVTTFA 424


>gi|302754796|ref|XP_002960822.1| hypothetical protein SELMODRAFT_73348 [Selaginella moellendorffii]
 gi|300171761|gb|EFJ38361.1| hypothetical protein SELMODRAFT_73348 [Selaginella moellendorffii]
          Length = 580

 Score =  240 bits (613), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 143/391 (36%), Positives = 215/391 (54%), Gaps = 11/391 (2%)

Query: 13  LIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQ 72
           L+E+ E+ +      Q + L +ILE+NA+ +Y    GL   T  E F+   P++ +ED++
Sbjct: 7   LLEKLESSSWSPGEAQDKVLAEILEKNAATDYFNRHGLRAATK-EVFRQRAPVIEYEDIK 65

Query: 73  PYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNR 132
             I RI DG+ S +L+  PIT +  SSGT+ G  K  P  +     +   F  + A  NR
Sbjct: 66  DEINRIADGEASTLLSANPITDMFTSSGTSGGAHKLFPKAEGHYAVSDYFFDLATALLNR 125

Query: 133 --EFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEV 189
             + P +  GKAL F+Y     KT GGL A  A T  Y S  F+  +    +   SP EV
Sbjct: 126 YSDLPGLRTGKALYFLYVRSGRKTPGGLPAYPALTGYYNSPEFRNWLFDPSNDYTSPLEV 185

Query: 190 IFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSS 249
           I   D  Q+ YCHLLCGLI   ++  +   FA +LV + R  E  W+EL  DIR G LS 
Sbjct: 186 ILCTDSVQASYCHLLCGLIHARDVTKLGCFFASALVRSIRCLEAWWQELSRDIRTGTLSE 245

Query: 250 RITVPSIRAAMSKILKPNPELADLIHKKC-SGLSNWYGLIPELFPNAKYLSGIMTGSMEH 308
           R+  P+ R A+ KIL+P+PELA++I + C SG  +  G++ +L+P+AK +  ++TG+ME 
Sbjct: 246 RVVDPACREAVEKILRPDPELANVIDEACLSG--SLKGIVRKLWPSAKAIDTVVTGAMEQ 303

Query: 309 YLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNL 368
           Y+ ++ +    LP+ S  Y SSE + G N+ P   P   ++  LP   Y+EF+P      
Sbjct: 304 YVGEVDYLTDGLPIASMIYASSESFFGVNLKPLCDPSQISYMFLPETSYYEFLPV----A 359

Query: 369 ESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
            S+      +PV L +V+ G EYE+++T  A
Sbjct: 360 RSEEKASREEPVELVDVEQGHEYELVITTNA 390


>gi|302817519|ref|XP_002990435.1| hypothetical protein SELMODRAFT_131591 [Selaginella moellendorffii]
 gi|300141820|gb|EFJ08528.1| hypothetical protein SELMODRAFT_131591 [Selaginella moellendorffii]
          Length = 595

 Score =  240 bits (612), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 142/411 (34%), Positives = 220/411 (53%), Gaps = 26/411 (6%)

Query: 5   METVDVDELIEEF-ETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCV 63
           +  +D DE +  F E IT D   IQ E L++IL +NA   Y    GL G    E F S +
Sbjct: 13  LSALDTDEQVLRFVEAITSDVASIQSELLQQILADNADVAYFHRHGLFGVPSAEDFHSRL 72

Query: 64  PLVTHEDLQPYIQRIIDGD---ISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTL 120
           PL++++D++  + RI  GD    + IL  +P+  + +SSGT+ G+ K  P         L
Sbjct: 73  PLISYQDIELDVARIASGDEDGHAKILCARPVREVLKSSGTSGGRQKLFP--------KL 124

Query: 121 QIFRTSYAFRNR-EFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAM 179
             +   +   NR   P   GK+L FIY      T GG+   +  +  + S  F+      
Sbjct: 125 SDYDPEFLVLNRVARPFNTGKSLHFIYVRNPEVTPGGVKLSSGLSGYFTSPAFRNRKIDP 184

Query: 180 QSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELC 239
            +   SPD+V+   D+ Q+ YCHLLCGL+ R+++  V S FA + V + ++ +  W ++C
Sbjct: 185 ATSYTSPDQVLQCVDYIQANYCHLLCGLVQRDQVVSVGSVFASTFVRSLKSLKCQWRDIC 244

Query: 240 DDIREGVLSSRI-TVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYL 298
            DI EG ++SRI T   +R A++ IL+P+ ELAD I K+C G  NW G++  L+P A+ +
Sbjct: 245 QDIAEGAVNSRIVTSLPVRNAVNAILRPDIELADAIRKECCG-GNWRGIVRRLWPEARLV 303

Query: 299 SGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSE-GWIGANVNPSLPPELATFAVLPNIGY 357
             I+TG+M+ Y+  +      LP+ S+ Y SSE   +G N++P  PP    + + P   Y
Sbjct: 304 QTIITGTMQQYVSIIDMLTDGLPIASSLYASSECSSLGVNLDPVCPPSEVLYTLFPCFAY 363

Query: 358 FEFIP--QRL-------GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
           FEF+P   RL       G  E   +  +   V L +VKVG+EYE+++T  A
Sbjct: 364 FEFLPLENRLSAPDEDQGQEERSFVSCD-NLVKLADVKVGDEYELVLTTKA 413


>gi|302804186|ref|XP_002983845.1| hypothetical protein SELMODRAFT_268799 [Selaginella moellendorffii]
 gi|300148197|gb|EFJ14857.1| hypothetical protein SELMODRAFT_268799 [Selaginella moellendorffii]
          Length = 578

 Score =  239 bits (611), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 139/388 (35%), Positives = 209/388 (53%), Gaps = 7/388 (1%)

Query: 13  LIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQ 72
           L+E+ E+ +      Q + L +ILE+NA+ +Y    GL   T  E F+   P++ +ED++
Sbjct: 7   LLEKLESSSWSPGEAQDKVLAEILEKNAATDYFNRHGLRAATK-EVFRQRAPVIEYEDIK 65

Query: 73  PYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNR 132
             I RI DG+ + +L   PI  +  SSGT+ G  K  P  +     +   F  + A  NR
Sbjct: 66  DEINRIADGEAATLLCANPIADMFTSSGTSGGAHKLFPKVEGHYAVSKYFFDLATALLNR 125

Query: 133 EFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIF 191
           + P +  GKAL F+Y     KT GGL A  A T  Y S  F+       +   SP EVI 
Sbjct: 126 DLPGLRTGKALYFLYVRSGRKTPGGLPAYPALTGYYNSLEFRNRPFDPSNDYTSPLEVIL 185

Query: 192 GPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRI 251
             D  Q+ YCHLLCGLI   ++  +   FA   V + R  E  W+EL  DIR G LS R+
Sbjct: 186 CTDSVQASYCHLLCGLIHARDVTKLGCFFASVFVRSIRCLEAWWQELSRDIRTGTLSERV 245

Query: 252 TVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLK 311
             P+ R A+ KIL+P+PELA++I + CS   +  G++ +L+P+AK +  ++TG+ME Y+ 
Sbjct: 246 VDPACREAVEKILRPDPELANVIDEACSS-GSLKGIVRKLWPSAKAIDTVVTGAMEQYVG 304

Query: 312 KLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQ 371
           ++ +    LP+ S  Y SSE + G N+ P   P   ++  LP   Y+EF+P       S+
Sbjct: 305 EVDYLTDGLPIASMIYASSESFFGVNLKPLCEPSQISYMFLPETSYYEFLPV----ARSE 360

Query: 372 VLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
                 +PV L +V+ G EYE+++T  A
Sbjct: 361 EKASREEPVELVDVEQGHEYELVITTNA 388


>gi|242084544|ref|XP_002442697.1| hypothetical protein SORBIDRAFT_08g001330 [Sorghum bicolor]
 gi|241943390|gb|EES16535.1| hypothetical protein SORBIDRAFT_08g001330 [Sorghum bicolor]
          Length = 653

 Score =  239 bits (611), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 142/400 (35%), Positives = 213/400 (53%), Gaps = 14/400 (3%)

Query: 5   METVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVP 64
           M   D D+L    E +T D   +Q   L +IL  NA AEYL      G TD  +F++ VP
Sbjct: 67  MAETDADKL-RFIEEVTADVAAVQERVLAEILSRNADAEYLSTR-CGGATDRATFRAKVP 124

Query: 65  LVTHEDLQPYIQRIIDGDISPILTGK--PITTISRSSGTTQGKPKFLPFNDELMETTLQI 122
           +VT+EDLQPYI RI  GD SPIL+G   P++ +  SSG   G  K +P  D+  +   ++
Sbjct: 125 MVTYEDLQPYILRIAHGDRSPILSGSGYPVSELLTSSGA--GDRKLIPVVDDDHDRHHRL 182

Query: 123 FRTSYAFRNREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQS 181
                A  N+  P + KG  L F++   ++ T GGL A T  T ++ S          + 
Sbjct: 183 HSLVGAVVNQYVPGLDKGSGLYFLFVKSETTTPGGLPARTILTRIFTSDGVWKLPYNPRR 242

Query: 182 QCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDD 241
              SP   +   D  QS+Y  +LCGL  R  +  V + FA  ++ A R F+  W +L  D
Sbjct: 243 GLTSPAAAVVCEDTFQSMYTQMLCGLCHRHSVLRVGAAFASGVLRAIRFFQRNWPQLAAD 302

Query: 242 IREGVLSSRITVPSIRAAMSKIL-KPNPELADLIHK---KCSGLSNWYGLIPELFPNAKY 297
           I  G ++ R+T   +R A++ +L +P+P+LA ++     K    ++  G+I  L+PN KY
Sbjct: 303 IDAGTITDRVTDHVLRQALAGVLTQPDPDLARVVRSEGSKADDGADMAGIIARLWPNTKY 362

Query: 298 LSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGY 357
           +  + TGSM HY+  L HY+G LP++S  Y SSE  +G N+ P   P   ++ V+PN+ Y
Sbjct: 363 VHAVATGSMAHYVPALNHYSGGLPIVSTAYFSSECSVGINLRPMCDPSEVSYTVMPNMAY 422

Query: 358 FEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN 397
           FEF+P    + +        + V L  V+VG EYE++VT 
Sbjct: 423 FEFLPT---DDDDATASATSQLVELAGVEVGREYELVVTT 459


>gi|302804222|ref|XP_002983863.1| hypothetical protein SELMODRAFT_119116 [Selaginella moellendorffii]
 gi|300148215|gb|EFJ14875.1| hypothetical protein SELMODRAFT_119116 [Selaginella moellendorffii]
          Length = 580

 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 143/390 (36%), Positives = 213/390 (54%), Gaps = 9/390 (2%)

Query: 13  LIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQ 72
           L+E+ E+ +      Q + L +IL +NA+  Y    GL   T  E F+   P++ +ED++
Sbjct: 7   LLEKLESSSWSPGEAQDKVLTEILGKNATTVYFNRHGLRAATK-EVFRQRAPVIEYEDIK 65

Query: 73  PYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNR 132
             I RI DG+ S +L   PIT +  SSGT+ G  K  P  +     +   F  + A  NR
Sbjct: 66  DEINRIADGEASTLLCANPITDMFTSSGTSGGAHKLFPKAEGHYAVSNYFFDLATALLNR 125

Query: 133 --EFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEV 189
             + P +  GKAL F+Y     KT GGL A  A T  Y S  F+       +   SP EV
Sbjct: 126 YSDLPGLRTGKALYFLYVRSGRKTPGGLPAYPALTGYYNSLEFRNRPFDPSNDYTSPMEV 185

Query: 190 IFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSS 249
           I   D  Q+ YCHLLCGLI   ++  +   FA +LV + R  E  W+EL  DIR G LS 
Sbjct: 186 ILCTDSVQASYCHLLCGLIHARDVTKLGCFFASALVRSIRCLEAWWQELSRDIRTGTLSE 245

Query: 250 RITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHY 309
           R+  P+ R A+ KIL+P+PELA++I + CS   +  G++ +L+P+AK +  ++TG+ME Y
Sbjct: 246 RVVDPACREAVEKILRPDPELANVIDEACSS-GSLKGIVRKLWPSAKAIDTVVTGAMEQY 304

Query: 310 LKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLE 369
           + ++ +  G LP+ S  Y SSE + G N+ P   P   ++  LP   Y+EF+P  +   E
Sbjct: 305 VGEVDYLTGGLPIASMIYASSESFFGVNLKPLCEPSQISYMFLPETSYYEFLP--VARSE 362

Query: 370 SQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
            +V     +PV L +V+ G EYE+++T  A
Sbjct: 363 EKV--SRKEPVELVDVEQGHEYELVITTNA 390


>gi|414888060|tpg|DAA64074.1| TPA: hypothetical protein ZEAMMB73_443383 [Zea mays]
 gi|414888061|tpg|DAA64075.1| TPA: hypothetical protein ZEAMMB73_443383 [Zea mays]
          Length = 547

 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 132/355 (37%), Positives = 202/355 (56%), Gaps = 6/355 (1%)

Query: 50  LNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFL 109
           +NG  D  +FKS VP+VT++ +QPYI RI  G+ S IL G+ I  + RSSGT+QG+P+ +
Sbjct: 1   MNGSVDISAFKSQVPVVTYDVVQPYIARIAAGERSSILCGEQIVELLRSSGTSQGEPRLM 60

Query: 110 PFNDELMETTLQIFRTSYAFRNREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYR 168
           P   E +   + ++       ++    +G+GKA+  ++   ++ T  G+   +  T+ Y+
Sbjct: 61  PSISEDIYRRMYLYSLIMPIMSKYIRGLGEGKAMYLLFVKAETLTNAGIPVRSVLTSYYK 120

Query: 169 SSTFKAEMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAF 228
           S  F      + +   SPDEVI  PD  QS+YC LLCGL+ R+ +  + + FA + + + 
Sbjct: 121 SPQFLQRKHDLYNSYTSPDEVILCPDSQQSMYCQLLCGLVERQNVVRLGAVFASAFLRSI 180

Query: 229 RTFELVWEELCDDIREGVLSSRITVPSIRAAMSKIL-KPNPELADLIHKKCSGLSNWYGL 287
              E  W +L  DIR G ++  IT  + R A    L +PNPELAD +   CS  S W G+
Sbjct: 181 SFLEKHWHDLVTDIRTGRINPSITNAACRVATESFLAQPNPELADEVEAICSSES-WKGV 239

Query: 288 IPELFPNAKYLSGIMTGSMEHYLKKLRHYA-GDLPLMSADYGSSEGWIGANVNPSLPPEL 346
           +  L+PN KY+  ++TG+M  Y+  L  Y+ G +PL+   Y SSE + G N+ P   P+ 
Sbjct: 240 LGRLWPNVKYIEAVLTGTMAQYVPMLEFYSDGRIPLVCTMYASSESYFGVNLRPLCSPKD 299

Query: 347 ATFAVLPNIGYFEFIPQRLG-NLESQVLCIEP-KPVGLTEVKVGEEYEIIVTNVA 399
            ++ +LPN+ YFEF+P   G  L      +E  K VGL +VKVG  YE++VT  A
Sbjct: 300 VSYTILPNMAYFEFVPLDDGLRLAEDGEAVEKEKLVGLVDVKVGCYYELVVTTFA 354


>gi|302812355|ref|XP_002987865.1| hypothetical protein SELMODRAFT_235392 [Selaginella moellendorffii]
 gi|300144484|gb|EFJ11168.1| hypothetical protein SELMODRAFT_235392 [Selaginella moellendorffii]
          Length = 609

 Score =  239 bits (609), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 142/418 (33%), Positives = 224/418 (53%), Gaps = 26/418 (6%)

Query: 5   METVDVDELIEEF-ETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCV 63
           +  +D DE +  F E IT D   IQ E L++IL +NA   Y    GL G    E F S +
Sbjct: 13  LSALDTDEQVLRFVEAITSDVASIQSELLQQILADNADVAYFHRHGLFGVPSAEDFHSRL 72

Query: 64  PLVTHEDLQPYIQRIIDGD---ISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTL 120
           PL++++D++  + RI  GD    + IL  +P+  + +SSGT+ G+ K  P   +     L
Sbjct: 73  PLISYQDIELDVARIASGDEDGHAKILCARPVREVLKSSGTSGGRQKLFPKLSDYDPEFL 132

Query: 121 QIFRTSYAF-------RNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFK 173
            + R    F        +R+ P   GK+L FIY      T GG+   +  +  + S  F+
Sbjct: 133 VLNRREARFSSCPDRRHSRQGPFNTGKSLHFIYVRNPEVTPGGVKLSSGLSGYFTSPAFR 192

Query: 174 AEMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFEL 233
                  +   SPD+V+   D+ Q+ YCHLLCGL+ R ++  + S FA + V + ++ + 
Sbjct: 193 NRKIDPATSYTSPDQVLQCVDYTQANYCHLLCGLVQRHQVVSIGSVFASTFVRSLKSLKC 252

Query: 234 VWEELCDDIREGVLSSRI--TVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPEL 291
            W+++C DI EG ++SRI  +VP +R A++ IL+P+ ELAD I K+C G  NW G++  L
Sbjct: 253 QWKDICQDIAEGAVNSRIVTSVP-VRNAVNAILRPDIELADAIRKECCG-GNWRGIVRRL 310

Query: 292 FPNAKYLSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSE-GWIGANVNPSLPPELATFA 350
           +P A+ +  I+TG+M+ Y+  +      LP+ S+ Y SSE   +G N++P  P     + 
Sbjct: 311 WPEARLVQTIITGTMQQYVSIIDMLTDGLPIASSLYASSECSSLGVNLDPVCPASEVLYT 370

Query: 351 VLPNIGYFEFIP--QRL-------GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
           + P   YFEF+P   RL       G  E   +  +   V L +VKVG+EYE+++T  A
Sbjct: 371 LFPCFAYFEFLPLENRLSAPDEDQGREERSFVSCD-NLVKLADVKVGDEYELVLTTKA 427


>gi|297807361|ref|XP_002871564.1| auxin-responsive GH3 family protein [Arabidopsis lyrata subsp.
           lyrata]
 gi|297317401|gb|EFH47823.1| auxin-responsive GH3 family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 595

 Score =  238 bits (608), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 146/411 (35%), Positives = 222/411 (54%), Gaps = 24/411 (5%)

Query: 1   MLEKMETVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFK 60
           ML K +  D    +   E +T + ++IQ   L  IL  NA  EYL    LNG+ D +SFK
Sbjct: 1   MLPKFDPTDQKACLSLLEDVTTNVKQIQDSVLEAILSRNARTEYLSGF-LNGQVDKQSFK 59

Query: 61  SCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTL 120
             +P+VT+ED++PYI RI +G+ S ++  +PI+ +  SSGT+ G PK +P   + +E   
Sbjct: 60  KNLPVVTYEDIRPYIDRIANGEPSDLICDRPISVLLTSSGTSGGVPKLIPLTTDELEQ-- 117

Query: 121 QIFRTSYAFRNREF------PIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKA 174
              R S+A   R         I + K+    + +++S+T  G+   T  T V +S     
Sbjct: 118 ---RISFASLYRPLLYKYVEGIRERKSFMLYFVTRESETASGILVRTMITCVLKSLKPSN 174

Query: 175 EMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELV 234
                Q+Q  SP  +    D  QS+YC LLCGL+ R+ +  + + FA S +   +  E  
Sbjct: 175 SFIWDQTQI-SPHGISTCSDTTQSMYCQLLCGLLQRDNVGRLGAPFASSFLKIIKFLEDH 233

Query: 235 WEELCDDIREGVLSSRITVPSIRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFP 293
           W E C +IR G LS  IT P   + + K L  P+PELA LI ++CS  S W  ++  L+P
Sbjct: 234 WPEFCSNIRTGRLSDWITDPQCVSGIGKFLTAPDPELASLIEQECSQTS-WEAIVKRLWP 292

Query: 294 NAKYLSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLP 353
            AK +  I+TG+M  Y+  L  Y+G LP++S  YGSSE +IG N+NP   P   ++ ++P
Sbjct: 293 KAKCIEAIVTGTMAQYIPLLEFYSGGLPVISTFYGSSECFIGLNLNPLSKPSDVSYTIIP 352

Query: 354 NIGYFEFIP-----QRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
            + YFEF+      Q  G+  ++    +P  V L +VK+G +YE +VT  A
Sbjct: 353 CMAYFEFLEVGKDYQETGHDPAE----KPVVVDLVDVKIGHDYEPVVTTFA 399


>gi|302814555|ref|XP_002988961.1| hypothetical protein SELMODRAFT_427552 [Selaginella moellendorffii]
 gi|300143298|gb|EFJ09990.1| hypothetical protein SELMODRAFT_427552 [Selaginella moellendorffii]
          Length = 533

 Score =  238 bits (606), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 142/410 (34%), Positives = 231/410 (56%), Gaps = 47/410 (11%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDP---ESFKSCVPLVTHED 70
           +E+FE + K+A + Q E L +IL+ N S +YLQ  G      P   +SFK+ +P++++++
Sbjct: 1   MEDFEAVCKNAVQAQEEALVQILQRNGSCQYLQRSG-----QPLCLKSFKAQLPIISYDN 55

Query: 71  LQPYIQRIIDGDISPILTG-KPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAF 129
           + P +Q+I D   S +L G  PI   + SSGT+ GK K LP  +       + + +S A+
Sbjct: 56  ISPELQQIADHGTSHLLLGCDPILYFTFSSGTSSGKHKILPQTNCGYSLLARAYASSNAY 115

Query: 130 RNREFPIGKGK--ALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPD 187
           R+  FP+   K   L F+Y  +Q K K GL  G  +TN Y+S  +  E + +     +P 
Sbjct: 116 RDEIFPLESTKPIGLHFVYSGEQYKAKSGLLIGAGSTNYYKSEAYNQEAETL----ATPY 171

Query: 188 EVIF-GPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGV 246
           E +  G D+ Q+ YCHLLCGL+ R +I+ + +TFA++L   FR  E  W+ LC+DI    
Sbjct: 172 EALLAGSDWQQTTYCHLLCGLVQRHKIEFIHATFAYTLSEVFRLLESNWKILCEDISARR 231

Query: 247 LS-SRITVPSIRAAMSKIL------KPNPELADLIHK--KCSGLSNWYGLIPELFPNAKY 297
           +S S++T   +R  + K++      K + ++A  I +       S W GL+P L+P AKY
Sbjct: 232 VSESKVTDEKLRVPVLKLMERELRGKDSSQVAREISEIFIAGTESRWSGLLPLLWPRAKY 291

Query: 298 LSGIMTGSMEHYLKKLRHYAGD-LPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIG 356
           +  ++TG+ME Y+  L+ YAGD L ++  DY +SEG++G N+ P+ PPE   F ++P   
Sbjct: 292 VHTVVTGAMEPYIPVLKKYAGDKLAIVGFDYSASEGYLGINMRPATPPEEVVFTLIPYTM 351

Query: 357 YFEFIPQRLGNLESQVLCIEPKPV---------GLTEVKVGEEYEIIVTN 397
           +FEFIP            ++P+ V         G  +++VG++YE++VT 
Sbjct: 352 FFEFIP------------VDPEEVPDHQKGETLGFKDLQVGKQYELVVTT 389


>gi|218196075|gb|EEC78502.1| hypothetical protein OsI_18426 [Oryza sativa Indica Group]
          Length = 638

 Score =  237 bits (604), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 149/415 (35%), Positives = 221/415 (53%), Gaps = 26/415 (6%)

Query: 5   METVDVDEL-IEEFETITKDAERIQRETLRKILEENASAEYLQNL--------GLNGRTD 55
           M T   DEL +   +  T+DA R+Q ETLR IL ENA A YL+           L   TD
Sbjct: 1   MATAAADELALRRLDDATRDARRLQLETLRAILAENAGAAYLRRYIPSDGGAHHLLRSTD 60

Query: 56  ----PESFKSCVPLVTHEDLQPYIQRIIDGDISPI-LTGKPITTISRSSGTTQGKPKFLP 110
                + F+  VP+ +++D    I+R+ DGD +P  L+ +P+     SSGT+  +PK +P
Sbjct: 61  LAAAADEFRRLVPVTSYDDYAESIRRVADGDAAPDELSPRPLLCFFLSSGTSSLRPKLIP 120

Query: 111 FNDE--LMETTLQIFRTSYAFRNREFPI--GKGKALQFIYGSKQSKTKGGLNAGTATTNV 166
           + D       T  + + + A   R FP      KAL F+Y  +  KTKGG  A  AT   
Sbjct: 121 YLDSPGARAATAAVMQANSALVRRLFPPRPAVSKALWFLYAGEVRKTKGGYEAMAATAWG 180

Query: 167 YRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVH 226
            RSS  +     M S C SP EVI G D  Q +YCHLLCGL   + +  + + +A +L  
Sbjct: 181 IRSSGIRGASPVM-SACVSPAEVILGADHQQQMYCHLLCGLRRWDAVDCIRAPYAAALAR 239

Query: 227 AFRTFELVWEELCDDIREG-VLSSRITVPSIRAAMSK--ILKPNPELADLIHKKCSGLSN 283
           A R  +  W +LCDD+  G V +  +T  ++R A+    +  P PELA  + + C    +
Sbjct: 240 ALRLLQSKWRQLCDDLECGTVCADVVTDAAMRGAVQDGVLAGPCPELAGRVRRICE-RDD 298

Query: 284 WYGLIPELFPNAKYLSGIMTGSMEHYLKKLRHYAGD-LPLMSADYGSSEGWIGANVNPSL 342
           W G++ +L+P+A+Y+S + TG+ME Y   ++H+AG+ LP++  DY +SE  IG N+  + 
Sbjct: 299 WRGVLRQLWPDARYISCVTTGTMEQYFPAIKHFAGEALPVLGTDYLASECAIGINLERTS 358

Query: 343 PPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN 397
           PPE  T+ +LP   YFEFIP  +          E  PV +  V+ G+ YE++ T 
Sbjct: 359 PPEETTYVLLPRAAYFEFIPFDMDAAGRGAAAAE--PVDIAGVEAGKTYELVATT 411


>gi|302800245|ref|XP_002981880.1| hypothetical protein SELMODRAFT_115497 [Selaginella moellendorffii]
 gi|300150322|gb|EFJ16973.1| hypothetical protein SELMODRAFT_115497 [Selaginella moellendorffii]
          Length = 563

 Score =  236 bits (603), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 154/395 (38%), Positives = 223/395 (56%), Gaps = 26/395 (6%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           I EFE   K+A  IQ E L  IL +NA  EYLQ  G        +FKS VP++ ++D++ 
Sbjct: 6   IAEFEDACKNAASIQEELLLGILRKNACCEYLQKYG--SPLTVAAFKSQVPVIGYDDIRS 63

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNRE 133
            ++RI  GD   IL   PIT+   SSGT+ GK K +P   E   + +++  +SYA++   
Sbjct: 64  DLERIAGGDRGQILCHDPITSFFTSSGTSSGKNKNIPATYENTVSVVKVLESSYAYKTNY 123

Query: 134 FPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGP 193
           F +GKG+++  +Y      TK GL  G  T +  RS+ F+   +  +S   +P EV+   
Sbjct: 124 FDLGKGRSVSLLYFKDLHATKSGLVFGPVTAHGIRSTRFR---QVWRSSRTTPYEVLVAA 180

Query: 194 -DFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFE-LVWEELCDDIREGVLS-SR 250
            DF +  YCHLLC L+ R E++ V   +A+S+  A R F+   WEELC+DIR   LS ++
Sbjct: 181 SDFRELTYCHLLCALLQRHEVEQVECMYAYSICEALRLFQNEYWEELCNDIRTASLSKTK 240

Query: 251 ITVPSIRAAMSK--ILKP---NPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGS 305
           +  P +R A  +  + +    N   AD I K CS  S W G++P LFP AK +S ++TG+
Sbjct: 241 VMDPKLRKAFERAGVFRSKCGNAMEADKIFKICSNES-WSGILPLLFPKAKLVSAVVTGA 299

Query: 306 MEHYLKKLRHYAGD-LPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQR 364
           M HY+  L  YAGD LP++   + SSEG IG N++P  PPE   + V P   Y+EF+P  
Sbjct: 300 MTHYVPTLSFYAGDQLPIVGQGFFSSEGGIGINIDPLSPPEDVIYTVTPRSLYYEFLP-- 357

Query: 365 LGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
           LG  E+         + + EV +GE YEI+VTN A
Sbjct: 358 LGATEA---------LSMHEVVIGELYEILVTNFA 383


>gi|357116561|ref|XP_003560049.1| PREDICTED: LOW QUALITY PROTEIN: probable indole-3-acetic acid-amido
           synthetase GH3.7-like [Brachypodium distachyon]
          Length = 623

 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 143/404 (35%), Positives = 211/404 (52%), Gaps = 27/404 (6%)

Query: 18  ETITKDAERIQRETLRKILEENASAEYLQNL------GLNGRTDPESFKSCVPLVTHEDL 71
           E +T DA  +QR+ L +I+  NA   YL+        G +     E+FK  VP+  +ED+
Sbjct: 20  ERLTTDAAALQRDLLTQIITRNAHTGYLRRFLGGLPPGASADDLREAFKKSVPVSGYEDV 79

Query: 72  QPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME-----TTLQIFRTS 126
           +PY+ R+  G+ S I+  + IT + RSSGT+ G+ K LP  +E ++       +Q    +
Sbjct: 80  KPYVDRVAAGEPSDIVCSERITHLLRSSGTSGGQQKLLPSTEEEIDRKAFFQAVQALVIN 139

Query: 127 YAFRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSP 186
                 +   GKG  L F +     +T  GL    + T  Y SS F+    +   +C SP
Sbjct: 140 MHLHADKDKCGKGMYLMFAFPG--DRTLSGLPVQXSLTAYYHSSQFQDRDFSEFDRCTSP 197

Query: 187 DEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGV 246
            E I  PD  QS+YC LLCGL+ R ++  V  TFA+S V      E  W+E+CD+IR G 
Sbjct: 198 IEAILCPDSKQSMYCQLLCGLVQRRDVDRVGGTFANSFVRGINFLECNWKEMCDNIRSGH 257

Query: 247 LSSRITVPSIRAAMSK--ILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTG 304
           LS  IT   +R A+++  +  P+P LAD I  +C+    W G++  L+P A+Y+  ++TG
Sbjct: 258 LSDWITHEPLRVAITERYLQVPDPALADEIVLECA-RKPWDGIVRRLWPGARYIRTVVTG 316

Query: 305 SMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIP-- 362
           SM  Y+  L  Y G  P +S  Y  +E   G N+ P  PP   ++A+LPNI YFEF    
Sbjct: 317 SMSQYIPILESYGGGTPFVSPLYACTECAPGVNLKPLDPPSCVSYALLPNIAYFEFAEIT 376

Query: 363 -------QRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
                  QR    +  +  +E K V L +VK+G  YE+IVT  A
Sbjct: 377 HADEEKVQRTNGFDDNL--VEIKLVDLVDVKIGRRYELIVTTFA 418


>gi|7543904|emb|CAB87144.1| auxin reponsive-like protein [Arabidopsis thaliana]
          Length = 573

 Score =  236 bits (601), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 143/404 (35%), Positives = 220/404 (54%), Gaps = 32/404 (7%)

Query: 1   MLEKMETVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFK 60
           ML K +  +    +   E +T + ++IQ   L  IL  NA  EYL+   LNG+ D ++FK
Sbjct: 1   MLPKFDPTNQKACLSLLEDLTTNVKQIQDSVLEAILSRNAQTEYLRGF-LNGQVDKQNFK 59

Query: 61  SCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTL 120
             VP+VT+ED++ YI RI +G+ S ++  +PI+ +  SSGT+ G PK +P   E +E  +
Sbjct: 60  KNVPVVTYEDIRSYIDRIANGEPSDLICDRPISVLLTSSGTSGGVPKLIPLTTEDLEQRI 119

Query: 121 QIFRTSYA---FRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMK 177
             F + YA   +++ +  + +GK+L F + +++SKT  G                     
Sbjct: 120 S-FSSLYAPLLYKHID-GLSEGKSLIFYFVTRESKTANG--------------------- 156

Query: 178 AMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEE 237
              S   SP  +    D  QS+YC LLCGL+ R+ +  + + FA S +   +  E  W E
Sbjct: 157 --DSLQVSPHAITTCADTTQSMYCQLLCGLLERDNVARLGAPFASSFLKVIKFLEDHWPE 214

Query: 238 LCDDIREGVLSSRITVPSIRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFPNAK 296
           LC +IR G LS  IT  +  + + K L  PNPELA LI ++CS  S W  ++  L+P AK
Sbjct: 215 LCSNIRTGRLSDWITDATCTSGIGKFLTAPNPELASLIEQECSKTS-WEAILKRLWPKAK 273

Query: 297 YLSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIG 356
            +  I+TG+M  Y+  L  Y+G LPL S+ YGSSE ++G N NP   P   ++ ++P +G
Sbjct: 274 CIESIITGTMAQYIPLLEFYSGGLPLTSSFYGSSECFMGVNFNPLCKPSDVSYTIIPCMG 333

Query: 357 YFEFIPQRLGNLESQVLCIE-PKPVGLTEVKVGEEYEIIVTNVA 399
           YFEF+     + E+     E P  V L +VK+G +YE +VT  +
Sbjct: 334 YFEFLEVEKDHQEAGHDPTEKPVVVDLVDVKIGHDYEPVVTTFS 377


>gi|356504890|ref|XP_003521227.1| PREDICTED: probable indole-3-acetic acid-amido synthetase
           GH3.6-like [Glycine max]
          Length = 576

 Score =  234 bits (598), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 142/395 (35%), Positives = 210/395 (53%), Gaps = 17/395 (4%)

Query: 11  DELIEEFETITKDAERIQRETLRKILEENASAEYLQNL--GLNGRTDPESFKSCVPLVTH 68
           +EL+++ E +TK+A+    ETLR IL  N    YLQ+   G     DP +F   VPL T+
Sbjct: 5   EELLQKLEDLTKNAQHHHLETLRSILLHNGIVHYLQSFKKGSLLHLDPSTFARVVPLSTY 64

Query: 69  EDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQG--KPKFLPFNDELMETTLQIF--R 124
           ED   YI ++ +G   P L+  P+     SSGT+    KPK +P+ D  +         R
Sbjct: 65  EDYVDYINQMAEGKDDPFLSVDPLRCFFYSSGTSSSTMKPKLIPYFDSSLSKAASFIGHR 124

Query: 125 TSYAFRNREFPIGK--GKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQ 182
            S A R R FP      K L F+Y    + TK GL    A+T   +S     +  A  S 
Sbjct: 125 GSVAVRQRLFPPRPEVNKILWFLYADNITTTKCGLKVMAASTYPLQSGNATPQQLAAFS- 183

Query: 183 CCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDI 242
             SP EVI   +    +YCHLLCGL   + I  + + +A  L+ AF   E  WE+LCDD+
Sbjct: 184 --SPLEVILATNVENQMYCHLLCGLRNLDLIDGIATPYAIGLIKAFGFLESKWEQLCDDL 241

Query: 243 REGVLSSRITVPSIRAAMSKILK-PNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGI 301
             G   + I+  ++R A++  L  P PELA+ I   C G +NW G++  L+PN +Y+  +
Sbjct: 242 DHGFPCNEISEGAMREAVTNTLGGPQPELANRIRLICEG-NNWGGIVYRLWPNIRYIRCV 300

Query: 302 MTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFI 361
            TGSM+ Y +KL++YAG++P++  DY +SE  +G N++   PPE   F +LP   YFEF+
Sbjct: 301 TTGSMKQYYQKLKYYAGEVPILGGDYFASECCVGLNLDIMQPPETTRFVMLPTFAYFEFL 360

Query: 362 PQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVT 396
           P  +            + V  + V+VG+ YE++VT
Sbjct: 361 PFNINEDNDA----SKEAVDYSSVEVGKMYEVVVT 391


>gi|255638272|gb|ACU19449.1| unknown [Glycine max]
          Length = 576

 Score =  234 bits (597), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 142/395 (35%), Positives = 210/395 (53%), Gaps = 17/395 (4%)

Query: 11  DELIEEFETITKDAERIQRETLRKILEENASAEYLQNL--GLNGRTDPESFKSCVPLVTH 68
           +EL+++ E +TK+A+    ETLR IL  N    YLQ+   G     DP +F   VPL T+
Sbjct: 5   EELLQKLEDLTKNAQHHHLETLRSILLHNGIVHYLQSFKKGSLLHLDPSTFARVVPLSTY 64

Query: 69  EDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQG--KPKFLPFNDELMETTLQIF--R 124
           ED   YI ++ +G   P L+  P+     SSGT+    KPK +P+ D  +         R
Sbjct: 65  EDYVDYINQMAEGKDDPFLSVDPLRCFFYSSGTSSSTMKPKLIPYFDSSLSKAASFIGHR 124

Query: 125 TSYAFRNREFPIGK--GKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQ 182
            S A R R FP      K L F+Y    + TK GL    A+T   +S     +  A  S 
Sbjct: 125 GSVAVRQRLFPPRPEVNKILWFLYADNITTTKCGLKVMAASTYPLQSGNATPQQLAAFS- 183

Query: 183 CCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDI 242
             SP EVI   +    +YCHLLCGL   + I  + + +A  L+ AF   E  WE+LCDD+
Sbjct: 184 --SPLEVILATNVENQMYCHLLCGLRNLDLIDGIATPYAIGLIKAFGFLESKWEQLCDDL 241

Query: 243 REGVLSSRITVPSIRAAMSKILK-PNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGI 301
             G   + I+  ++R A++  L  P PELA+ I   C G +NW G++  L+PN +Y+  +
Sbjct: 242 DHGSPCNEISEGAMREAVTNTLGGPQPELANRIRLICEG-NNWGGIVYRLWPNIRYIRCV 300

Query: 302 MTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFI 361
            TGSM+ Y +KL++YAG++P++  DY +SE  +G N++   PPE   F +LP   YFEF+
Sbjct: 301 TTGSMKQYYQKLKYYAGEVPILGGDYFASECCVGLNLDIMQPPETTRFVMLPTFAYFEFL 360

Query: 362 PQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVT 396
           P  +            + V  + V+VG+ YE++VT
Sbjct: 361 PFNINEDNDA----SKEAVDYSSVEVGKMYEVVVT 391


>gi|302807257|ref|XP_002985341.1| hypothetical protein SELMODRAFT_234778 [Selaginella moellendorffii]
 gi|300146804|gb|EFJ13471.1| hypothetical protein SELMODRAFT_234778 [Selaginella moellendorffii]
          Length = 493

 Score =  234 bits (596), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 136/380 (35%), Positives = 208/380 (54%), Gaps = 22/380 (5%)

Query: 20  ITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRII 79
           + ++A  +Q E L  I+E NAS EYL++  +   TD +SFK+ +P+V +E++   IQR+ 
Sbjct: 1   MCRNATFVQEEILGAIVEHNASCEYLRSYNV---TDADSFKAHIPIVDYENIAARIQRMA 57

Query: 80  DGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFPIGK- 138
           DG    +L   P+     SS TT  K K  P   +         + S  +  R+FP+G  
Sbjct: 58  DGGPGSVLCKDPVIAFILSSATTTDKRKAFPLTTKSRSLKNHADKISAGYGERDFPVGSF 117

Query: 139 GKALQFIYGSKQSK-TKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQ 197
             AL F+Y       +K GL     ++  + S  +K       S+  S DEVIFGP + +
Sbjct: 118 PTALAFMYAQPHGTLSKSGLPIMPGSSFYFTSQAYKER----PSRSISTDEVIFGP-WWE 172

Query: 198 SLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPSIR 257
           S YCHLL GLI R E+  + S FA++LVHAF   E  W  LC DIR G L  R+    +R
Sbjct: 173 STYCHLLSGLILRTEVDYITSFFAYTLVHAFNMLEAEWRNLCYDIRTGKLDERVKDVKLR 232

Query: 258 AAMSKILKPNPELADLIHKKCSGLSNW-YGLIPELFPNAKYLSGIMTGSMEHYLKKLRHY 316
           AA++ +L+ +P+ A  I + CS   +W  G++ +L+P AKYL  ++TG M+ Y+  LR Y
Sbjct: 233 AAVAGVLREDPDSAGSIEEVCSSNVSWDQGIVLKLWPKAKYLLTVVTGDMKPYIPALRRY 292

Query: 317 AGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIE 376
           AG + +M  +Y  SEG  G N+NP+  PE   F ++P   Y EF+  R           +
Sbjct: 293 AGGVHIMGREYIGSEGVYGININPATEPENVVFTLVPTTLYMEFLRLR-----------D 341

Query: 377 PKPVGLTEVKVGEEYEIIVT 396
            K V  +++++GE+YE+++T
Sbjct: 342 NKLVDSSDLEIGEQYELVIT 361


>gi|215512252|gb|ACJ68117.1| putative indole-3-acetic acid-amido synthetase [Brassica napus]
          Length = 594

 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 143/399 (35%), Positives = 212/399 (53%), Gaps = 14/399 (3%)

Query: 11  DELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHED 70
           D  ++E E IT  A  +Q   L  ILE+N   +YL    + G  D   FK  VP++T++D
Sbjct: 13  DNALKELERITSKAAEVQDNILCGILEQNKDTQYLSKY-MKGSKDVLEFKRSVPIITYKD 71

Query: 71  LQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFR 130
           + PYIQRI +G+ S ++TG  IT I  SSGT+ G+PK +P   E ++    ++       
Sbjct: 72  VCPYIQRIANGEDSSLITGHLITEILCSSGTSGGEPKLMPTISEDLDRRTFVYNLINPIA 131

Query: 131 NREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEV 189
           N+    + KGK +   +   ++ T  GL   T  T+ Y+S  F+       +   SP + 
Sbjct: 132 NKYLEGLDKGKTMYLNFVKAETSTPCGLPIRTVLTSYYKSKHFQCRPYDPFNDLTSPIQT 191

Query: 190 IFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSS 249
           I   D +QS+YC LL  LI R ++    S    SL          W +LC DIR G LS 
Sbjct: 192 ILCEDSNQSMYCQLLAALIHRHKVHASRSCLRFSLSPCNLYLGRKWSQLCQDIRTGHLSP 251

Query: 250 RITVPSIRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEH 308
            IT P  + AM+ +L  PNP+LAD + + C G  +W G++ +L+P AK++  ++TGSM  
Sbjct: 252 MITDPGCQTAMTSLLASPNPDLADEVEEIC-GRPSWKGILCQLWPQAKFIEAVVTGSMAQ 310

Query: 309 YLKKLRHYA-GDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLG- 366
           Y+  L  ++ G +PL+   Y SSE + G NV P   P    F +LPN+ YFEFIP  LG 
Sbjct: 311 YIPALEFFSQGKIPLVCPMYASSETYFGVNVKPLSKPSDVVFTLLPNMCYFEFIP--LGK 368

Query: 367 ------NLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
                 ++E + +    K V L +VK+G  YE++VT  A
Sbjct: 369 NGTLSFDVEDEEVVPCDKVVDLVDVKLGRYYELVVTTFA 407


>gi|302753900|ref|XP_002960374.1| hypothetical protein SELMODRAFT_74871 [Selaginella moellendorffii]
 gi|300171313|gb|EFJ37913.1| hypothetical protein SELMODRAFT_74871 [Selaginella moellendorffii]
          Length = 583

 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 128/386 (33%), Positives = 212/386 (54%), Gaps = 7/386 (1%)

Query: 17  FETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQ 76
            E +T+    +Q   L+ +LE NA  +Y Q  GL+G    E F+  +P+ T+ D++   Q
Sbjct: 20  MEHVTRHVSSVQDYVLQLLLEANAGTDYFQRHGLHGIPTKEEFRRLLPITTYSDMEADFQ 79

Query: 77  RIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFPI 136
           R+ DGD S  +    +  +  SSGT+ GK K  P +    +  + + R + A  N++ P 
Sbjct: 80  RLADGDESKTICAARVLEMLTSSGTSGGKQKLFPKSPSYDQEFVALNRVARAALNKKAPY 139

Query: 137 G-KGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDF 195
             +GK+LQF Y  K   T GG+   +  +  + S  F+      +S   SPD+VI   D+
Sbjct: 140 ASRGKSLQFFYVRKPGITSGGVTTTSGLSGYFTSPAFRQRKLDPESGYTSPDQVILCVDY 199

Query: 196 HQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVP- 254
            Q+ YCHLLCGL   +E+  + + FA +LV + +  + +W+ELC DI  G ++  I    
Sbjct: 200 QQASYCHLLCGLTQSQEVVSIGAAFASTLVRSLKALKDLWQELCVDIETGRVNDNIVSDL 259

Query: 255 SIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLR 314
           S++ A++ +LKP+P+LA L+ ++CS  SNW G++  L+P A+ +  I+TGSM+ Y+  + 
Sbjct: 260 SVKHAVNALLKPDPKLAALVRRECSK-SNWRGIVRRLWPRARIIQAIVTGSMQQYVPAID 318

Query: 315 HYAGDLPLMSADYGSSE-GWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVL 373
            ++  LP+ S+ Y SSE   +G N++P   P    ++  P   Y+EF+P    +  S   
Sbjct: 319 FFSDGLPIASSIYASSECSTLGVNLSPVCSPYDVRYSPFPCFVYYEFLPV---SSSSSSS 375

Query: 374 CIEPKPVGLTEVKVGEEYEIIVTNVA 399
                 V L EV++G EYE+++T  A
Sbjct: 376 PSRDDLVQLAEVELGREYELVITTRA 401


>gi|297807365|ref|XP_002871566.1| auxin-responsive GH3 family protein [Arabidopsis lyrata subsp.
           lyrata]
 gi|297317403|gb|EFH47825.1| auxin-responsive GH3 family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 583

 Score =  230 bits (587), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 140/387 (36%), Positives = 223/387 (57%), Gaps = 9/387 (2%)

Query: 17  FETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQ 76
            E +T +  +IQ   L  IL  NA  EYL+   LNG+ D +SFK  +P+VT+E ++P+I 
Sbjct: 4   LEDVTTNVNKIQDSVLEAILSRNAQTEYLRGF-LNGQLDKQSFKKNLPIVTYEVIKPHID 62

Query: 77  RIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYA---FRNRE 133
           RI +G+ S ++  + I+ +  ++GT+ G PK +P   E +E  + +F   YA   F++ E
Sbjct: 63  RIANGEPSDLICDRHISLLLATTGTSGGIPKLIPLTAEELEQRI-LFGFLYAPLVFKHIE 121

Query: 134 FPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGP 193
             + +GK+L F + +++S+T  GL      T V +S          + Q  SP  +    
Sbjct: 122 -GLTQGKSLMFYFVTRESETASGLMVRFMITCVLKSVNPTNSFLWDRVQI-SPHAIAICE 179

Query: 194 DFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITV 253
           D +Q++YC LLCGL+ RE +  + + +A S +   +  E  W ELC +IR G LS  IT 
Sbjct: 180 DTNQAMYCQLLCGLLQRENVARLGAPYASSFLKVIKFLEDHWHELCSNIRTGRLSDWITD 239

Query: 254 PSIRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKK 312
               + +SK L  PNP+LA+LI ++CS  S W  ++  L+P AK +  ++TG+M  Y+  
Sbjct: 240 AQCVSGISKFLTAPNPDLANLIEQECSKTS-WEAILRRLWPKAKCIEAVITGTMAQYIPL 298

Query: 313 LRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQV 372
           L  Y G LPL+S+ YGSSE +IG N+NP   P   ++ ++P++GYFEFI       E+  
Sbjct: 299 LEFYGGGLPLVSSWYGSSECFIGINLNPLSKPSDVSYTIIPSMGYFEFIEVVKDRQEAGH 358

Query: 373 LCIEPKPVGLTEVKVGEEYEIIVTNVA 399
           +  +P  V L +VK+G +YE++VT  +
Sbjct: 359 VPADPVVVDLVDVKIGHDYELLVTTFS 385


>gi|302810830|ref|XP_002987105.1| hypothetical protein SELMODRAFT_125443 [Selaginella moellendorffii]
 gi|300145002|gb|EFJ11681.1| hypothetical protein SELMODRAFT_125443 [Selaginella moellendorffii]
          Length = 561

 Score =  230 bits (587), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 136/393 (34%), Positives = 209/393 (53%), Gaps = 25/393 (6%)

Query: 10  VDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHE 69
           ++ L+ EFE + ++A  +Q E L  I+E NAS EYL++  +   TD +SFK+ +P+V +E
Sbjct: 1   MEALVNEFEDMCRNAALVQEEILGAIVEHNASCEYLRSYNV---TDTDSFKAHIPIVDYE 57

Query: 70  DLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAF 129
           D+   IQR+ DG    +L   P+     SS TT  K K  P   +         + S  +
Sbjct: 58  DIAARIQRMADGGPGSVLCKDPVIVFILSSATTTDKRKAFPLTTKSRSLKNHADKISAGY 117

Query: 130 RNREFPIGK----GKALQFIYGSKQSK-TKGGLNAGTATTNVYRSSTFKAEMKAMQSQCC 184
           R R   + +      +L F+Y       +K GL     ++  + S  +K       S+  
Sbjct: 118 RERYIMLSQQNLINSSLAFMYAQPHGTLSKSGLPIMPGSSFYFTSQVYKER----PSRST 173

Query: 185 SPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIRE 244
           S DEVIFGP + +S YCHLL GLI R E+  + S FA++LVHAF   E  W  LC DIR 
Sbjct: 174 STDEVIFGP-WWESTYCHLLSGLILRTEVDYITSFFAYTLVHAFNMLEAEWRNLCYDIRT 232

Query: 245 GVLSSRITVPSIRAAMSKILKPNPELADLIHKKCSGLSNW-YGLIPELFPNAKYLSGIMT 303
           G L  R+    +RAA+  +L+ +P+ A  I + CS   +W  G++ +L+P AKYL  ++T
Sbjct: 233 GKLDERVKDVKLRAAVVGVLREDPDSAGSIEEVCSSNVSWDQGIVLKLWPKAKYLLTVVT 292

Query: 304 GSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQ 363
           G M+ Y+  LR YAG + +M   Y  SEG  G N++P+  PE   F ++P   Y EF+  
Sbjct: 293 GGMKPYIPALRRYAGGVHIMGRAYIGSEGVYGINIDPATEPENVVFTLVPTTLYMEFLRL 352

Query: 364 RLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVT 396
           R           + K V  + +++ E+YE+++T
Sbjct: 353 R-----------DNKLVDSSNLEISEQYELVIT 374


>gi|125577348|gb|EAZ18570.1| hypothetical protein OsJ_34099 [Oryza sativa Japonica Group]
          Length = 679

 Score =  229 bits (585), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 138/410 (33%), Positives = 218/410 (53%), Gaps = 17/410 (4%)

Query: 1   MLEKMETVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQN------LGLNGRT 54
           M+   +  D    +E  E +T  A  +QR  L ++L  N   +YL+       +   G  
Sbjct: 34  MIPACDPHDGPACLELIEVLTTRAAAVQRRVLAEVLAMNTGTDYLRRFLGDEVVAAAGGE 93

Query: 55  D--PESFKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFN 112
           D    +FK  VP+V +ED++PYI+RI +G  S +++ KPIT +  SSGT+ G+PK +P  
Sbjct: 94  DELAAAFKERVPVVEYEDVKPYIERIANGAPSSLISSKPITELLTSSGTSGGQPKLMPAT 153

Query: 113 DELMETTLQIFRTSYAFRNREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSST 171
           +E ++    ++       N+    + +G+ +  ++   +  T  G+ A    T+ Y+S  
Sbjct: 154 EEELDRKTFLYNLLVPVMNKYVEGLDEGRGMYLLFVKPEITTASGMVARPVLTSYYKSRH 213

Query: 172 FKAEMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTF 231
           F+    +  ++  SPD  I  PD  QS+Y  LLCGL  R E+  V + FA + + A +  
Sbjct: 214 FRRRPDSPYTRYTSPDAAILCPDSRQSMYAQLLCGLARRGEVLRVGAVFASAFLRAVKFL 273

Query: 232 ELVWEELCDDIREGVLS-SRITVPSIRAAMSKIL--KPNPELADLIHKKCSGLSNWYGLI 288
           E  W  LC DIR G    + +T  + R A+  +L  + +P+LAD I  +C G S W G++
Sbjct: 274 EGHWRALCADIRAGRADPAVVTDAACRGAVDAVLAARADPDLADAIAAECGGAS-WRGIV 332

Query: 289 PELFPNAKYLSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELAT 348
             L+P  KY+  I+TGSM  Y+  L  Y G LPL+S  Y SSE + G N+ P  PPE   
Sbjct: 333 RRLWPRTKYIDVIVTGSMAQYIPLLEFYGGGLPLVSTMYASSESYFGINLRPLDPPEEVV 392

Query: 349 FAVLPNIGYFEFIP-QRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN 397
           + +LPN+ Y+EFI  ++ G+ E      + + V L  V+VG  YE++VT 
Sbjct: 393 YTLLPNMCYYEFIKVEKDGDGEK---VRDGEVVDLVGVEVGAYYELVVTT 439


>gi|115485723|ref|NP_001068005.1| Os11g0528700 [Oryza sativa Japonica Group]
 gi|122207335|sp|Q2R3B4.1|GH313_ORYSJ RecName: Full=Probable indole-3-acetic acid-amido synthetase
           GH3.13; AltName: Full=Auxin-responsive GH3-like protein
           13; Short=OsGH3-13; AltName: Full=OsGH3-14
 gi|77551236|gb|ABA94033.1| indole-3-acetic acid-amido synthetase GH3.1, putative [Oryza sativa
           Japonica Group]
 gi|113645227|dbj|BAF28368.1| Os11g0528700 [Oryza sativa Japonica Group]
          Length = 469

 Score =  229 bits (585), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 138/410 (33%), Positives = 218/410 (53%), Gaps = 17/410 (4%)

Query: 1   MLEKMETVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQN------LGLNGRT 54
           M+   +  D    +E  E +T  A  +QR  L ++L  N   +YL+       +   G  
Sbjct: 34  MIPACDPHDGPACLELIEVLTTRAAAVQRRVLAEVLAMNTGTDYLRRFLGDEVVAAAGGE 93

Query: 55  D--PESFKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFN 112
           D    +FK  VP+V +ED++PYI+RI +G  S +++ KPIT +  SSGT+ G+PK +P  
Sbjct: 94  DELAAAFKERVPVVEYEDVKPYIERIANGAPSSLISSKPITELLTSSGTSGGQPKLMPAT 153

Query: 113 DELMETTLQIFRTSYAFRNREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSST 171
           +E ++    ++       N+    + +G+ +  ++   +  T  G+ A    T+ Y+S  
Sbjct: 154 EEELDRKTFLYNLLVPVMNKYVEGLDEGRGMYLLFVKPEITTASGMVARPVLTSYYKSRH 213

Query: 172 FKAEMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTF 231
           F+    +  ++  SPD  I  PD  QS+Y  LLCGL  R E+  V + FA + + A +  
Sbjct: 214 FRRRPDSPYTRYTSPDAAILCPDSRQSMYAQLLCGLARRGEVLRVGAVFASAFLRAVKFL 273

Query: 232 ELVWEELCDDIREGVLS-SRITVPSIRAAMSKIL--KPNPELADLIHKKCSGLSNWYGLI 288
           E  W  LC DIR G    + +T  + R A+  +L  + +P+LAD I  +C G S W G++
Sbjct: 274 EGHWRALCADIRAGRADPAVVTDAACRGAVDAVLAARADPDLADAIAAECGGAS-WRGIV 332

Query: 289 PELFPNAKYLSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELAT 348
             L+P  KY+  I+TGSM  Y+  L  Y G LPL+S  Y SSE + G N+ P  PPE   
Sbjct: 333 RRLWPRTKYIDVIVTGSMAQYIPLLEFYGGGLPLVSTMYASSESYFGINLRPLDPPEEVV 392

Query: 349 FAVLPNIGYFEFIP-QRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN 397
           + +LPN+ Y+EFI  ++ G+ E      + + V L  V+VG  YE++VT 
Sbjct: 393 YTLLPNMCYYEFIKVEKDGDGEK---VRDGEVVDLVGVEVGAYYELVVTT 439


>gi|125534602|gb|EAY81150.1| hypothetical protein OsI_36332 [Oryza sativa Indica Group]
          Length = 662

 Score =  229 bits (585), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 138/410 (33%), Positives = 217/410 (52%), Gaps = 17/410 (4%)

Query: 1   MLEKMETVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNL------GLNGRT 54
           M+   +  D    +E  E +T  A  +QR  L ++L  N   +YL+           G  
Sbjct: 34  MIPACDPHDGPACLELIEVLTTRAAAVQRRVLAEVLAMNTGTDYLRRFLGDEVAAAAGGE 93

Query: 55  D--PESFKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFN 112
           D    +FK  VP+V +ED++PYI+RI +G  S +++ KPIT +  SSGT+ G+PK +P  
Sbjct: 94  DELAAAFKERVPVVEYEDVKPYIERIANGAPSSLISSKPITELLTSSGTSGGQPKLMPAT 153

Query: 113 DELMETTLQIFRTSYAFRNREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSST 171
           +E ++    ++       N+    + +G+ +  ++   +  T  G+ A    T+ Y+S  
Sbjct: 154 EEELDRKTFLYNLLVPVMNKYVEGLDEGRGMYLLFVKPEITTASGMVARPVLTSYYKSRH 213

Query: 172 FKAEMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTF 231
           F+    +  ++  SPD  I  PD  QS+Y  LLCGL  R E+  V + FA + + A +  
Sbjct: 214 FRRRPDSPYTRYTSPDAAILCPDSRQSMYAQLLCGLARRGEVLRVGAVFASAFLRAVKFL 273

Query: 232 ELVWEELCDDIREGVLS-SRITVPSIRAAMSKIL--KPNPELADLIHKKCSGLSNWYGLI 288
           E  W  LC DIR G    + +T  + R A+  +L  + +P+LAD I  +C G S W G++
Sbjct: 274 EGHWRALCADIRAGRADPAVVTDAACRGAVDAVLAARADPDLADAIAAECGGAS-WRGIV 332

Query: 289 PELFPNAKYLSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELAT 348
             L+P  KY+  I+TGSM  Y+  L  Y G LPL+S  Y SSE + G N+ P  PPE   
Sbjct: 333 RRLWPRTKYIDVIVTGSMAQYIPLLEFYGGGLPLVSTMYASSESYFGINLRPLDPPEEVV 392

Query: 349 FAVLPNIGYFEFIP-QRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN 397
           + +LPN+ Y+EFI  ++ G+ E      + + V L  V+VG  YE++VT 
Sbjct: 393 YTLLPNMCYYEFIKVEKDGDGEK---VRDGEVVDLVGVEVGAYYELVVTT 439


>gi|358345675|ref|XP_003636901.1| Histone acetyltransferase HAC5, partial [Medicago truncatula]
 gi|355502836|gb|AES84039.1| Histone acetyltransferase HAC5, partial [Medicago truncatula]
          Length = 266

 Score =  229 bits (585), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 130/252 (51%), Positives = 154/252 (61%), Gaps = 63/252 (25%)

Query: 10  VDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHE 69
           +D+ IEEFE ++ DA R+QR TL++ILE+NA AEYLQNLGLNGRTDPESFK CVPLVTH+
Sbjct: 1   MDKFIEEFEEVSTDAARVQRVTLKRILEDNALAEYLQNLGLNGRTDPESFKLCVPLVTHK 60

Query: 70  DLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAF 129
           DL+P                                      + EL+   L +F  S   
Sbjct: 61  DLEPV-------------------------------------STELLMVMLLLF--SLQN 81

Query: 130 RNREFPIGK-GKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDE 188
            ++EFP+ K GKAL FIYGSKQ KT+GGL A T T                       DE
Sbjct: 82  LSQEFPMMKNGKALHFIYGSKQFKTRGGLVATTIT-----------------------DE 118

Query: 189 VIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLS 248
           V+F  DF QSLYCHLL GLI+RE++Q V S FAH++V AFRTFE VWEELC DIREGVL+
Sbjct: 119 VVFCSDFFQSLYCHLLSGLIYREDVQSVSSPFAHNVVQAFRTFEQVWEELCSDIREGVLT 178

Query: 249 SRITVPSIRAAM 260
           SRITVPSIR  M
Sbjct: 179 SRITVPSIRMVM 190



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 42/64 (65%), Positives = 49/64 (76%)

Query: 336 ANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIV 395
           ANVNP LPPE AT+AV P  GYFEFIP    N +   LC +P+P+GLTEVKVG+EYEI+V
Sbjct: 195 ANVNPKLPPEFATYAVFPQNGYFEFIPLTQLNNDGTFLCADPQPMGLTEVKVGKEYEIVV 254

Query: 396 TNVA 399
           TN A
Sbjct: 255 TNSA 258


>gi|302810602|ref|XP_002986992.1| hypothetical protein SELMODRAFT_124989 [Selaginella moellendorffii]
 gi|300145397|gb|EFJ12074.1| hypothetical protein SELMODRAFT_124989 [Selaginella moellendorffii]
          Length = 583

 Score =  229 bits (585), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 143/401 (35%), Positives = 231/401 (57%), Gaps = 29/401 (7%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDP---ESFKSCVPLVTHED 70
           +E+FE + K+A + Q E L +IL+ N S  YLQ  G      P   +SFK+ +P++++++
Sbjct: 1   MEDFEAVCKNAVQAQEEALVQILQRNGSCHYLQRFG-----QPLCLKSFKTQLPIISYDN 55

Query: 71  LQPYIQRIIDGDISPILTG-KPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAF 129
           + P +Q+I D   S +L G  PI   S SSGT+ GK K LP  +       + + +S A+
Sbjct: 56  ISPELQQIADHGTSHLLLGCDPILYFSFSSGTSSGKHKILPQTNCGYSLLARAYASSNAY 115

Query: 130 RNREFPIGKGK--ALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPD 187
           R+  FP+   K   L F+Y  +Q K K GL  G  +TN Y+S  +  E + +     +P 
Sbjct: 116 RDEVFPLESTKPIGLHFVYSGEQYKAKSGLLLGAGSTNYYKSEAYNQEAETL----ATPY 171

Query: 188 EVIF-GPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGV 246
           E +  G D+ Q+ YCHLLCGL+ R +I+ + +TFA++L  AFR  E  W+ LC+DI    
Sbjct: 172 EALLAGSDWQQTTYCHLLCGLVQRHKIEFIHATFAYTLSEAFRLLESDWKILCEDISARR 231

Query: 247 LS-SRITVPSIRAAMSKIL------KPNPELADLIHK--KCSGLSNWYGLIPELFPNAKY 297
           +S S++T   +R  + K++      K + ++A  I +    S  S W GL+P L+P AKY
Sbjct: 232 VSESKVTDEKLRVPVLKLMERELRGKDSSQVAREISEIFVTSKESRWSGLLPLLWPRAKY 291

Query: 298 LSGIMTGSMEHYLKKLRHYAGD-LPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIG 356
           +  ++TG+ME Y+  L+ YAGD L ++  DY +SEG++G N+ P+ PPE   F ++P   
Sbjct: 292 VHTVVTGAMEPYIPVLKKYAGDKLAIVGFDYSASEGYLGINMRPATPPEEVVFTLIPYTM 351

Query: 357 YFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN 397
           +FEFIP     +       + + +G  +++VG++YE++VT 
Sbjct: 352 FFEFIPVDPEEVPDHQ---QGETLGFKDLQVGKQYELVVTT 389


>gi|302756345|ref|XP_002961596.1| hypothetical protein SELMODRAFT_437924 [Selaginella moellendorffii]
 gi|300170255|gb|EFJ36856.1| hypothetical protein SELMODRAFT_437924 [Selaginella moellendorffii]
          Length = 426

 Score =  229 bits (585), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 138/399 (34%), Positives = 212/399 (53%), Gaps = 30/399 (7%)

Query: 13  LIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPE---SFKSCVPLVTHE 69
           +I +FE   KDA   Q   L +IL++N+S  YLQ  G      P+   +FK+ VP++++E
Sbjct: 4   VIADFEQSCKDASSNQERVLGRILDDNSSCHYLQRYG-----SPQTLAAFKAQVPIISYE 58

Query: 70  DLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAF 129
           D+   I +I  G   P+L   PI     SSGTT    K +P   E    + +    + A+
Sbjct: 59  DVGSEIDKIASGVQGPLLCSYPILHFFASSGTTSANGKIIPLTAENAAASGRATEIANAY 118

Query: 130 RNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEV 189
           R R FP   G  L F Y   Q +TK GL    A+T   +   F    KA  S+  +P EV
Sbjct: 119 RTRCFPSDNGIILGFFYCMDQVETKSGLLVSAASTYALKGERF----KATSSKYTTPYEV 174

Query: 190 IF-GPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLS 248
           +  G D+ +  YCH LC L+ R +++ + S F++++  A R     W E+C DIR G L 
Sbjct: 175 LVAGSDWRELTYCHWLCALLQRGKVEQIISIFSYTICEAIRMLRAEWREICSDIRAGSLC 234

Query: 249 -SRITVPSIRAAM------SKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGI 301
             ++T P++R A+        I   +P  A++I + CS   +W G++  LFP    +S +
Sbjct: 235 EGKVTSPNLRQAVLASPVFDGIKGGDPVEAEVISEICS-RDSWSGIVLLLFPRTNVMSTV 293

Query: 302 MTGSMEHYLKKLRHYAGD-LPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEF 360
           +TGSM+ Y+  LR Y GD +P++  DY SSEG IG N +P   PE   + ++P   Y+EF
Sbjct: 294 VTGSMKLYVPSLRDYVGDQVPIVGLDYFSSEGAIGINADPRCHPERVVYTMVPTALYYEF 353

Query: 361 IPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
           +P    + ++         +GL EV+VGE+YE+++TN A
Sbjct: 354 LPVDSTSCDN--------ILGLHEVQVGEQYEVVITNFA 384


>gi|75136491|sp|Q6ZLA7.1|GH310_ORYSJ RecName: Full=Putative indole-3-acetic acid-amido synthetase
           GH3.10; AltName: Full=Auxin-responsive GH3-like protein
           10; Short=OsGH3-10
 gi|34393499|dbj|BAC83060.1| putative Nt-gh3 deduced protein [Oryza sativa Japonica Group]
          Length = 478

 Score =  228 bits (581), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 138/390 (35%), Positives = 206/390 (52%), Gaps = 37/390 (9%)

Query: 12  ELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGR-TDPESFKSCVPLVTHED 70
            LIEE   +T + + +Q   L +IL  NA AEYL   GL+   TD  +F++ VP+ +++D
Sbjct: 33  RLIEE---LTSNVDAVQERVLAEILGRNADAEYLDKCGLDASDTDRATFRAKVPVASYDD 89

Query: 71  LQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFR 130
           L+PY++RI +GD SPIL+  PI     SSGT+ G+ K +P   + M     +   + +  
Sbjct: 90  LKPYVKRIANGDRSPILSTHPIIEFFTSSGTSAGERKLMPIVTDEMARREVLSSLATSVL 149

Query: 131 NREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEV 189
           N   P +  GK L F++   ++KT GGL A  A T+VY+S  FK           SP   
Sbjct: 150 NVYVPGLHTGKGLYFLFARSETKTPGGLTAQPALTSVYKSEHFKRAYAYT-----SPMAA 204

Query: 190 IFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSS 249
           I   D  QS+Y  +LCGL  R ++  V + FA +LV A R  +L W +L  DI  G L+ 
Sbjct: 205 ILCEDASQSMYAQMLCGLCQRHDVLRVGAVFAAALVRAIRFLQLNWAQLAADIETGELNP 264

Query: 250 RITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHY 309
           R+T PS R                   +CS   +W G++  L+P  K L+ ++TG M  Y
Sbjct: 265 RVTDPSDR-------------------ECS-RGDWTGIVTRLWPKTKCLNVVVTGVMAQY 304

Query: 310 LKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLE 369
           +  L++Y+G LP++S  Y SSE + G N+ P   P   ++ ++PN  YFEF+P  +G   
Sbjct: 305 IPTLQYYSGGLPIVSGMYASSECFFGLNLRPLCGPSEVSYTIMPNTAYFEFLP--VGEAV 362

Query: 370 SQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
                +E     L  V+ G EYE++VT  A
Sbjct: 363 DASNLVE-----LARVEDGREYEVVVTTYA 387


>gi|225436867|ref|XP_002271002.1| PREDICTED: probable indole-3-acetic acid-amido synthetase GH3.6
           [Vitis vinifera]
 gi|296086675|emb|CBI32310.3| unnamed protein product [Vitis vinifera]
          Length = 578

 Score =  228 bits (580), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 138/397 (34%), Positives = 214/397 (53%), Gaps = 18/397 (4%)

Query: 12  ELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDL 71
           E++++ E  TKDA  +Q +TL  IL+ N  + YLQ  G     D  SF+  VPL  ++D 
Sbjct: 5   EILKKLEDSTKDAVAVQLQTLHTILQRNGRSSYLQRYG--ASLDTGSFREAVPLSCYDDY 62

Query: 72  QPYIQRIIDGDIS------PILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQ--IF 123
             YI R+ DG         P+L+  P+     SSGT+  KPK +P+ D            
Sbjct: 63  ADYIDRMADGGGGDDDGDRPLLSVDPLVCFFNSSGTSSMKPKLIPYFDSPPSKAASHIAH 122

Query: 124 RTSYAFRNREFPIGK--GKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQS 181
           + S A   R FP  +   K L F+Y    + TKGG  A  A+    +S+          S
Sbjct: 123 QGSVAILRRLFPPRQSINKVLWFLYAGNVTYTKGGFKAMAASAFPLQSNN--KNPSPFLS 180

Query: 182 QCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDD 241
              SP EVI G +  Q +YCH+LCGL   + +  + + +A  L+ AF   E  WE++C+D
Sbjct: 181 TSASPREVILGSNVEQQMYCHILCGLRNLDFLDGIRAPYAVGLIRAFALLEFKWEQICED 240

Query: 242 IREGVLSSRITVPSIRAAMSKILK-PNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSG 300
           ++ G  S  IT  ++R +++++L  P  +L+  I   C G  NW G++ +L+PN +Y+  
Sbjct: 241 LKCGFPSMEITDIAMRDSVTEVLAGPQLDLSKRIRTICEG-KNWGGIVGKLWPNVRYIKC 299

Query: 301 IMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEF 360
           + TGSME Y +KL++YAG++P++  DY +SE  +G N++   PP+L  F +LP   YFEF
Sbjct: 300 VCTGSMEQYYQKLKYYAGEIPVLGGDYFASECCVGINLDILQPPQLTRFVLLPTAAYFEF 359

Query: 361 IPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN 397
           +P  L   E ++     + V  + V+VG+ YEI+VT 
Sbjct: 360 LPFTLD--EEEIGDDAQETVDFSGVEVGKMYEIVVTT 394


>gi|42567818|ref|NP_196842.2| auxin-responsive GH3 family protein [Arabidopsis thaliana]
 gi|332004505|gb|AED91888.1| auxin-responsive GH3 family protein [Arabidopsis thaliana]
          Length = 624

 Score =  227 bits (579), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 139/403 (34%), Positives = 227/403 (56%), Gaps = 9/403 (2%)

Query: 1   MLEKMETVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFK 60
           ML K +  +    +   E +T + ++IQ   L  IL  N+  EYL+   L G+ D +SFK
Sbjct: 31  MLPKFDPTNPLATMSVLEDVTTNVKKIQDSLLEAILSRNSQTEYLRGF-LTGQLDKQSFK 89

Query: 61  SCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTL 120
             VP+VT+ED++P+I RI +G+ S ++  +PI+ +  ++GT+ G PK +P   E +E  +
Sbjct: 90  KNVPIVTYEDIKPHIDRIANGEPSDLICDRPISLLLATTGTSGGIPKLIPLTAEELEQRI 149

Query: 121 QIFRTSYA---FRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMK 177
            +F   Y    F++ E  + +GK+L F + +++S+T  GL      T V +S        
Sbjct: 150 -LFGFLYVPLVFKHIE-GLTQGKSLMFYFVTRESETVSGLMVRFMITCVLKSVNPTNSFL 207

Query: 178 AMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEE 237
             + Q  SP  +    D +Q +YC LLCGL+ RE +  + + +A S +   +  E  W E
Sbjct: 208 WDRVQI-SPHAIAICEDTNQGMYCQLLCGLLQREHVARLGAPYASSFLKVIKFLEDHWPE 266

Query: 238 LCDDIREGVLSSRITVPSIRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFPNAK 296
           LC +IR G LS  IT     + +   L  P+P+LA+LI ++CS  S W  ++  ++P AK
Sbjct: 267 LCSNIRTGRLSDWITDAQCVSGIGNFLTAPDPDLANLIEQECSKTS-WEAILSRIWPKAK 325

Query: 297 YLSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIG 356
            +  ++TG+M  Y+  L  Y G LPL+S+ YGSSE +IG N+NP   P   ++ ++P++G
Sbjct: 326 CIEAVITGTMAQYIPLLEFYGGGLPLVSSWYGSSECFIGINLNPLSKPSDVSYTIIPSMG 385

Query: 357 YFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
           YFEFI       E+  +  +P  V L +VK+G +YE++VT  +
Sbjct: 386 YFEFIEVVKDRQEAGHVPADPVVVDLVDVKIGHDYELLVTTFS 428


>gi|296087366|emb|CBI33740.3| unnamed protein product [Vitis vinifera]
          Length = 486

 Score =  227 bits (579), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 128/353 (36%), Positives = 192/353 (54%), Gaps = 25/353 (7%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           ++  E +T++ +++Q + L +IL +N   EYLQ   L G TD ++FKS VP+VT+EDLQP
Sbjct: 23  LQFIEEMTRNPDQVQEKILAEILSQNGETEYLQRFKLAGATDRDTFKSKVPVVTYEDLQP 82

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNRE 133
            IQRI +GD SPIL+  PI+    SSGT+ G+ K +P   E  +   +++       N  
Sbjct: 83  DIQRIANGDRSPILSSHPISEFLTSSGTSAGERKLMPTIHEEWDRRQKLYSLLMPVMNLY 142

Query: 134 FP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFG 192
            P + KGK L F++   ++KT  GL A    T  YRS  FK       +   SPDE I  
Sbjct: 143 VPGLDKGKGLYFLFVKSETKTPSGLVARPVLTGYYRSEHFKKRPYDPYNVYTSPDEAILC 202

Query: 193 PDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRIT 252
            D  QS+Y  +LCGL+  +E+  V + FA  L+ A R  ++ W++L  DI  G+L+ +IT
Sbjct: 203 VDSFQSMYAQMLCGLLMHKEVLRVGAVFASGLLRAIRFLQVHWQQLAHDISTGILNPKIT 262

Query: 253 VPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKK 312
            PS                     +CSG  NW  +I  ++PN KYL  I+TG+M  Y+  
Sbjct: 263 DPS---------------------ECSG-GNWERIITRIWPNTKYLDVIVTGAMAQYIPT 300

Query: 313 LRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNI--GYFEFIPQ 363
           L +++G +PL    Y SSE + G N+ P   P   ++ ++PN+  G+    PQ
Sbjct: 301 LDYFSGGIPLACTMYASSECYFGLNLKPMSKPSEVSYTIMPNMVTGFHNSAPQ 353


>gi|302767842|ref|XP_002967341.1| hypothetical protein SELMODRAFT_87623 [Selaginella moellendorffii]
 gi|300165332|gb|EFJ31940.1| hypothetical protein SELMODRAFT_87623 [Selaginella moellendorffii]
          Length = 583

 Score =  226 bits (577), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 127/389 (32%), Positives = 212/389 (54%), Gaps = 13/389 (3%)

Query: 17  FETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQ 76
            E +T+    +Q   L+ +LE NA  +Y Q  GL G    E F+  +P+ T+ D++   Q
Sbjct: 20  MEHVTRHVSSVQDYVLQLLLEANAGTDYFQRHGLYGIPTKEEFRRLLPITTYSDMEADFQ 79

Query: 77  RIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFPI 136
           R+ +GD S  +    +  +  SSGT+ GK K  P +    +  + + R + A  N++ P 
Sbjct: 80  RLANGDESKTICAARVLEMLTSSGTSGGKQKLFPKSPSYDQEFVALNRVARAALNKKAPY 139

Query: 137 G-KGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDF 195
             +GK+LQF Y  K   T GG+   +  +  + S  F+      +S   SPD+VI   D+
Sbjct: 140 ASRGKSLQFFYVRKPGITSGGVTTTSGLSGYFTSPAFRQRKLDPESGYTSPDQVILCVDY 199

Query: 196 HQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVP- 254
            Q+ YCHLLCGL   +E+  + + FA +LV + +  + +W+ELC DI  G ++  I    
Sbjct: 200 QQASYCHLLCGLTQSQEVVSIGAPFASTLVRSLKALKDLWQELCVDIETGRVNDNIVSDL 259

Query: 255 SIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLR 314
           S++ A++ +LKP+P+LA L+ ++CS  SNW G++  L+P A+ +  I+TGSM+ Y+  + 
Sbjct: 260 SVKHAVNALLKPDPKLAALVRRECSK-SNWRGIVRRLWPRARIIQAIVTGSMQQYVPAID 318

Query: 315 HYAGDLPLMSADYGSSE-GWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVL 373
            ++  LP+ S+ Y +SE   +G N++P   P    ++  P   Y+EF+P       S   
Sbjct: 319 FFSDGLPIASSIYAASECSTLGVNLSPVCSPYDVRYSPFPCFVYYEFLPV------SSSS 372

Query: 374 CIEPKP---VGLTEVKVGEEYEIIVTNVA 399
              P+    V L EV++G EYE+++T  A
Sbjct: 373 SSSPRRDDLVQLAEVELGREYELVITTRA 401


>gi|224131296|ref|XP_002321049.1| GH3 family protein [Populus trichocarpa]
 gi|222861822|gb|EEE99364.1| GH3 family protein [Populus trichocarpa]
          Length = 578

 Score =  226 bits (577), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 140/396 (35%), Positives = 214/396 (54%), Gaps = 16/396 (4%)

Query: 11  DELIEEFETITKDAERIQRETLRKILEENASAEYLQNL--GLNGRTDPESFKSCVPLVTH 68
           DEL    E +TK+A   Q +TL  IL+  AS  YLQ      +   D  +F+S VPL ++
Sbjct: 4   DELDRNLEDLTKNAAHHQLQTLHSILQHQASVGYLQPYLSACHAPVDAATFRSQVPLSSY 63

Query: 69  EDLQPYIQRIIDGDIS---PILTGKPITTISRSSGTTQGKPKFLPFNDELME--TTLQIF 123
           +D    I ++ +GDI    P+L+  P+     SSGT+  KPK +P+ D  +    +    
Sbjct: 64  DDYFHLINQLANGDIDHHQPLLSADPLLCFFYSSGTSTMKPKLIPYFDSALSKAASYNAH 123

Query: 124 RTSYA-FRNREFPIGK-GKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQS 181
           + S A FRN   P  +  K L F+Y      T+GG     A+T   + +  ++      S
Sbjct: 124 QGSAAIFRNLVPPRPEVNKILWFLYADDAPTTRGGFKVMAASTYPLQGNKSRSNWSQTLS 183

Query: 182 QCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDD 241
            C SP EV+FG +  Q +YCHLLC L   + I  + + +A  L+ AF   E  WE+LCDD
Sbjct: 184 -CISPREVVFGSNIKQQMYCHLLCALRSFDIIDGIRAAYAAGLIRAFSLLESKWEKLCDD 242

Query: 242 IREGVLSSRITVPSIRAAMSKILK-PNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSG 300
           +  G  S  I   +++ ++ + L  P  +L+  I + C+  SNW G++ +L+PN +Y+  
Sbjct: 243 LESGFPSLEIGDAAMKESVVEFLGGPQVDLSRRIREICAE-SNWGGILSKLWPNVRYVKS 301

Query: 301 IMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEF 360
           + TGSM+ Y  KL++YAGD+ ++  DY +SE  +G N++   PPE   F +LP   YFEF
Sbjct: 302 VTTGSMKQYYSKLKYYAGDVMILGGDYFASECCLGINLDIQQPPESTRFVMLPTTAYFEF 361

Query: 361 IPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVT 396
           +P  L   ES V  +  + V  + VKVG+ YE+ VT
Sbjct: 362 LPFDLN--ESSV--VGEETVDFSGVKVGKMYEVAVT 393


>gi|302810850|ref|XP_002987115.1| hypothetical protein SELMODRAFT_235186 [Selaginella moellendorffii]
 gi|300145012|gb|EFJ11691.1| hypothetical protein SELMODRAFT_235186 [Selaginella moellendorffii]
          Length = 546

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 138/390 (35%), Positives = 208/390 (53%), Gaps = 38/390 (9%)

Query: 10  VDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHE 69
           ++ LI EFE + ++A  +Q E L  I+E NAS E+LQ+  +   TD +SFK+ VP+V +E
Sbjct: 1   MEALINEFEDMCRNAAAVQEEVLGTIVEHNASCEFLQSYNV---TDVDSFKAHVPVVGYE 57

Query: 70  DLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQ-IFRTSYA 128
           D+   IQR+ DGD S IL   P+     SSGTT  K K  P   +  +     + +   A
Sbjct: 58  DIAAKIQRMADGDPSSILCKDPVLAFISSSGTTTEKRKAFPLTTKSCDVKKHALHKIGAA 117

Query: 129 FRNREFPIGK-GKALQFIYGSK-QSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSP 186
           +  R+FP+G    AL F+Y    ++ +K G+     +   + S  +K       S+  SP
Sbjct: 118 YLERDFPVGSFPTALAFMYAHPCETLSKSGIPIMPVSNFTFTSQAYKER----PSRSTSP 173

Query: 187 DEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGV 246
           DEVI+GP + +S YCHLLCGLI R E+  + S FA++LV A    E  W  LC DIR G 
Sbjct: 174 DEVIWGP-WWESTYCHLLCGLIQRMEVDYITSFFAYTLVQALNMLEAEWRSLCHDIRTGK 232

Query: 247 LSSRITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSM 306
           L  R+    +RAA++ +L  +P+ A  I +                P AKYL  ++TG M
Sbjct: 233 LDERVKDVKLRAAVAGVLHEDPDSAGFIEE----------------PKAKYLWTVVTGGM 276

Query: 307 EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLG 366
           + Y+  LR YAG + ++   Y  SEG  G N++P+  PE   F ++P   Y EF+  R  
Sbjct: 277 KPYVPPLRRYAGGVHIIGRAYMGSEGVYGINMDPATEPENVVFTLVPTTLYMEFLRLR-- 334

Query: 367 NLESQVLCIEPKPVGLTEVKVGEEYEIIVT 396
                    + K V  + +++GE+YE+++T
Sbjct: 335 ---------DNKLVDSSNLEIGEQYELVIT 355


>gi|220702739|gb|ACL81168.1| jasmonate resistant 1-like protein [Mirabilis jalapa]
          Length = 160

 Score =  225 bits (574), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 104/160 (65%), Positives = 131/160 (81%)

Query: 1   MLEKMETVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFK 60
           MLEKM  ++ +++++EFE +TK+A +IQ+ETL+ ILE N+ AEYLQ  GLNGR+DP+SFK
Sbjct: 1   MLEKMGEINTEKVMKEFEQVTKNAGKIQKETLKNILELNSEAEYLQETGLNGRSDPDSFK 60

Query: 61  SCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTL 120
            CVP+VTH D+ PYIQRI+DGD + ILT KPIT ++ SSGT+QGKPKF+PFNDEL E T+
Sbjct: 61  ECVPIVTHMDIDPYIQRILDGDSTNILTTKPITNVTLSSGTSQGKPKFVPFNDELFENTM 120

Query: 121 QIFRTSYAFRNREFPIGKGKALQFIYGSKQSKTKGGLNAG 160
           QI+ TSYAFRNREFP+ K K L F+Y SK  KTKGGL AG
Sbjct: 121 QIYETSYAFRNREFPLNKSKGLFFVYSSKHFKTKGGLFAG 160


>gi|302143170|emb|CBI20465.3| unnamed protein product [Vitis vinifera]
          Length = 569

 Score =  222 bits (566), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 133/400 (33%), Positives = 203/400 (50%), Gaps = 65/400 (16%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           ++  E +T +A+++Q+  L +IL  NA  EYL   GL G TD ++FK  +P++T+EDLQP
Sbjct: 26  LQFIEDVTTNADQVQKRVLAEILTRNAHVEYLHRHGLGGHTDRDTFKKLMPVITYEDLQP 85

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNRE 133
            I RI +GD S IL   PI+    SSGT+ G+ K +P  +E +E    ++       ++ 
Sbjct: 86  DITRIANGDTSLILCSNPISEFLTSSGTSGGERKLMPTIEEELERRSLLYSLLMPVMSQS 145

Query: 134 FP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFG 192
              + KGK + F++   ++KT GGL A    T+ Y+SS F+       +   SP+E I  
Sbjct: 146 VQGLEKGKGMYFLFIKSEAKTPGGLVARPVLTSYYKSSHFRERPYDPYTNYTSPNETILC 205

Query: 193 PDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRIT 252
           PD +QS+Y  +LCGL+  +E+  V + FA   + A R  E  W  LC DIR G +  +IT
Sbjct: 206 PDSYQSMYSQMLCGLVQNKEVLRVGAVFASGFIRAIRFLEKHWTLLCRDIRTGTIDQQIT 265

Query: 253 VPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKK 312
            PS+R A+ ++LKP+P+LAD +                                      
Sbjct: 266 DPSVREAVMRVLKPDPKLADFVE------------------------------------- 288

Query: 313 LRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEF------------ 360
                G+L  M   Y SSE + G N+NP   P   ++ ++P + YFEF            
Sbjct: 289 -----GELCTM---YASSECYFGVNLNPLCKPSEVSYTLIPTMAYFEFLPVHRNNGTNSI 340

Query: 361 -IPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
            +P+ L + E Q L      V L +VK+G+EYE++VT  A
Sbjct: 341 SVPKSLNDKEQQDL------VDLVDVKLGQEYELVVTTYA 374


>gi|7543905|emb|CAB87145.1| auxin reponsive-like protein [Arabidopsis thaliana]
          Length = 576

 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 137/403 (33%), Positives = 224/403 (55%), Gaps = 27/403 (6%)

Query: 1   MLEKMETVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFK 60
           ML K +  +    +   E +T + ++IQ   L  IL  N+  EYL+   L G+ D +SFK
Sbjct: 1   MLPKFDPTNPLATMSVLEDVTTNVKKIQDSLLEAILSRNSQTEYLRGF-LTGQLDKQSFK 59

Query: 61  SCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTL 120
             VP+VT+ED++P+I RI +G+ S ++  +PI+ +  ++GT+ G PK +P   E +E  +
Sbjct: 60  KNVPIVTYEDIKPHIDRIANGEPSDLICDRPISLLLATTGTSGGIPKLIPLTAEELEQRI 119

Query: 121 QIFRTSYA---FRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMK 177
            +F   Y    F++ E  + +GK+L F + +++S+T  GL                  M 
Sbjct: 120 -LFGFLYVPLVFKHIE-GLTQGKSLMFYFVTRESETVSGL------------------MV 159

Query: 178 AMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEE 237
             + Q  SP  +    D +Q +YC LLCGL+ RE +  + + +A S +   +  E  W E
Sbjct: 160 RDRVQI-SPHAIAICEDTNQGMYCQLLCGLLQREHVARLGAPYASSFLKVIKFLEDHWPE 218

Query: 238 LCDDIREGVLSSRITVPSIRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFPNAK 296
           LC +IR G LS  IT     + +   L  P+P+LA+LI ++CS  S W  ++  ++P AK
Sbjct: 219 LCSNIRTGRLSDWITDAQCVSGIGNFLTAPDPDLANLIEQECSKTS-WEAILSRIWPKAK 277

Query: 297 YLSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIG 356
            +  ++TG+M  Y+  L  Y G LPL+S+ YGSSE +IG N+NP   P   ++ ++P++G
Sbjct: 278 CIEAVITGTMAQYIPLLEFYGGGLPLVSSWYGSSECFIGINLNPLSKPSDVSYTIIPSMG 337

Query: 357 YFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
           YFEFI       E+  +  +P  V L +VK+G +YE++VT  +
Sbjct: 338 YFEFIEVVKDRQEAGHVPADPVVVDLVDVKIGHDYELLVTTFS 380


>gi|302814557|ref|XP_002988962.1| hypothetical protein SELMODRAFT_128888 [Selaginella moellendorffii]
 gi|300143299|gb|EFJ09991.1| hypothetical protein SELMODRAFT_128888 [Selaginella moellendorffii]
          Length = 487

 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 140/410 (34%), Positives = 229/410 (55%), Gaps = 47/410 (11%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDP---ESFKSCVPLVTHED 70
           +E+FE + K+A + Q E L +IL+ N S  YLQ  G      P   +SFK+ +P++++++
Sbjct: 1   MEDFEAVCKNAVQAQEEALVQILQRNGSCHYLQRFG-----QPLCLKSFKAQLPIISYDN 55

Query: 71  LQPYIQRIIDGDISPILTG-KPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAF 129
           + P +Q+I D   S +L G  PI   S SSGT+ GK K LP  +       + + +S A+
Sbjct: 56  ISPELQQIADHGTSHLLLGCDPILYFSFSSGTSSGKHKILPQTNCGYSLLARAYASSNAY 115

Query: 130 RNREFPIGKGK--ALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPD 187
           R+  FP+   K   L F+Y  +Q K K GL  G  +TN Y+S  +  E + +     +P 
Sbjct: 116 RDEIFPLESTKPIGLHFVYSGEQYKAKSGLLLGAGSTNYYKSEAYNQEAETL----ATPY 171

Query: 188 EVIF-GPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGV 246
           E +  G D+ Q+ YCHLLCGL+ R +I+ + + FA++L  AFR  E  W+ LC+DI    
Sbjct: 172 EALLAGSDWQQTTYCHLLCGLVQRHKIEFIHAAFAYTLSEAFRLLESDWKILCEDISARR 231

Query: 247 LS-SRITVPSIRAAMSKIL------KPNPELADLIHK--KCSGLSNWYGLIPELFPNAKY 297
           +S S++    +R  + K++      K + ++A  I +       S W GL+P L+P AKY
Sbjct: 232 VSESKVKDEKLRVPVLKLMERELRGKDSSQVAREISEIFIAGTESRWSGLLPLLWPRAKY 291

Query: 298 LSGIMTGSMEHYLKKLRHYAGD-LPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIG 356
           +  ++TG+ME Y+  L+ YAGD L ++  +Y +SEG++G N+ P+ PPE   F ++P   
Sbjct: 292 VHTVVTGAMEPYIPVLKKYAGDKLAIVGFNYSASEGYLGINMRPATPPEEVVFTLIPYTM 351

Query: 357 YFEFIPQRLGNLESQVLCIEPKPV---------GLTEVKVGEEYEIIVTN 397
           +F+FIP            ++P+ V         G  +++VG++YE++VT 
Sbjct: 352 FFKFIP------------VDPEEVPDHQKGETLGFKDLQVGKQYELVVTT 389


>gi|302810604|ref|XP_002986993.1| hypothetical protein SELMODRAFT_125145 [Selaginella moellendorffii]
 gi|300145398|gb|EFJ12075.1| hypothetical protein SELMODRAFT_125145 [Selaginella moellendorffii]
          Length = 487

 Score =  219 bits (557), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 139/410 (33%), Positives = 229/410 (55%), Gaps = 47/410 (11%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDP---ESFKSCVPLVTHED 70
           +E+FE + K+A + Q E L +IL+ N S  YLQ  G      P   +SFK+ +P++++++
Sbjct: 1   MEDFEAVCKNAVQAQEEALVQILQRNGSCHYLQRFG-----QPLCLKSFKAQLPIISYDN 55

Query: 71  LQPYIQRIIDGDISPILTG-KPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAF 129
           + P +Q+I D   S +L G  PI   S SSGT+ GK K LP  +       + + +S A+
Sbjct: 56  ISPELQQIADHGTSHLLLGCDPILYFSFSSGTSSGKHKILPQTNCGYSLLARAYASSNAY 115

Query: 130 RNREFPIGKGK--ALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPD 187
           R+  FP+   K   L F+Y  +Q + K GL  G  +TN Y+S  +  E + +     +P 
Sbjct: 116 RDEIFPLESTKPIGLHFVYSGEQYRAKSGLLLGAGSTNYYKSEAYNQEAETL----ATPY 171

Query: 188 EVIF-GPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGV 246
           E +  G D+ Q+ YCHLLCGL+ R +I+ + + FA++L  AFR  E  W+ LC+DI    
Sbjct: 172 EALLAGSDWQQTTYCHLLCGLVQRHKIEFIHAAFAYTLSEAFRLLESDWKILCEDISARR 231

Query: 247 LS-SRITVPSIRAAMSKIL------KPNPELADLIHK--KCSGLSNWYGLIPELFPNAKY 297
           +S S++    +R  + K++      K + ++A  I +       S W GL+P L+P AKY
Sbjct: 232 VSESKVKDEKLRVPVLKLMERELRGKDSSQVAREISEIFVAGTESRWSGLLPLLWPRAKY 291

Query: 298 LSGIMTGSMEHYLKKLRHYAGD-LPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIG 356
           +  ++TG+ME Y+  L+ YAGD L ++  +Y +SEG++G N+ P+ PPE   F ++P   
Sbjct: 292 VHTVVTGAMEPYIPVLKKYAGDKLAIVGFNYSASEGYLGINMRPATPPEEVVFTLIPYTM 351

Query: 357 YFEFIPQRLGNLESQVLCIEPKPV---------GLTEVKVGEEYEIIVTN 397
           +F+FIP            ++P+ V         G  +++VG++YE++VT 
Sbjct: 352 FFKFIP------------VDPEEVPDHQKGETLGFKDLQVGKQYELVVTT 389


>gi|52076489|dbj|BAD45368.1| putative auxin-responsive GH3 [Oryza sativa Japonica Group]
 gi|52076797|dbj|BAD45740.1| putative auxin-responsive GH3 [Oryza sativa Japonica Group]
          Length = 445

 Score =  217 bits (553), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 135/377 (35%), Positives = 195/377 (51%), Gaps = 17/377 (4%)

Query: 1   MLEKMETVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNL--GLNGRTDP-- 56
           +L + +  DV    +    +T DA  IQR  LR+IL  N+  EYL+    G  G  D   
Sbjct: 4   LLPEFDPADVRAGRDLIHRLTADAAGIQRGVLREILSRNSGTEYLRRFLGGAAGDDDDVR 63

Query: 57  ESFKSCVPLVTHEDLQPYIQRIIDGD--ISPILTGKPITTISRSSGTTQGKPKFLPFNDE 114
           ++FK  VP+  +ED++PY+ R+  G    S +L   PIT +SRSSGT+ G+ K LP   E
Sbjct: 64  DAFKRRVPVSGYEDVKPYVDRVASGGEPSSALLCSDPITCLSRSSGTSGGQQKLLPSTAE 123

Query: 115 LMETTLQIFRTSYAFRNREFPIGKGKA--------LQFIYGSKQSKTKGGLNAGTATTNV 166
            ++  +  +      RN       G+         +  ++     +T  GL   +A T  
Sbjct: 124 ELDRKVFFYAVQALVRNMSLHTDHGEDDDGGGGEGMYLMFAFHGDRTLSGLPIQSALTTY 183

Query: 167 YRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVH 226
           Y S  F+        +C SP E I  P   QS+YC LLCGL+ R  +  V ++FA  LV 
Sbjct: 184 YHSRQFQECDIGGFDKCTSPLEAILCPYGEQSMYCQLLCGLLHRCRVDRVGASFAAGLVR 243

Query: 227 AFRTFELVWEELCDDIREGVLSSRITVPSIRAAMSK--ILKPNPELADLIHKKCSGLSNW 284
             +  E  WEE+C +IR G LS  IT   +R A++   +   NP LAD I  +C+    W
Sbjct: 244 GIKFLENHWEEMCFNIRSGQLSDWITHTPLRDAVTGQYLQGSNPALADEIASECA-RKPW 302

Query: 285 YGLIPELFPNAKYLSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPP 344
            G++  L+P A+Y+  I+TGSM  Y+  L  Y G LPL+S  Y S+E   G N+ P  PP
Sbjct: 303 DGIVRRLWPRARYIRTIVTGSMSQYIPILEVYGGGLPLVSPIYASTECAAGINLRPLDPP 362

Query: 345 ELATFAVLPNIGYFEFI 361
              ++A+LPNI YFEF+
Sbjct: 363 SHVSYALLPNIAYFEFL 379


>gi|115468210|ref|NP_001057704.1| Os06g0499500 [Oryza sativa Japonica Group]
 gi|82592861|sp|Q654M1.2|GH37_ORYSJ RecName: Full=Probable indole-3-acetic acid-amido synthetase GH3.7;
           AltName: Full=Auxin-responsive GH3-like protein 7;
           Short=OsGH3-7
 gi|52076488|dbj|BAD45367.1| putative auxin-responsive GH3 [Oryza sativa Japonica Group]
 gi|52076796|dbj|BAD45739.1| putative auxin-responsive GH3 [Oryza sativa Japonica Group]
 gi|113595744|dbj|BAF19618.1| Os06g0499500 [Oryza sativa Japonica Group]
 gi|215693887|dbj|BAG89086.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215708825|dbj|BAG94094.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 620

 Score =  217 bits (553), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 135/377 (35%), Positives = 195/377 (51%), Gaps = 17/377 (4%)

Query: 1   MLEKMETVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNL--GLNGRTDP-- 56
           +L + +  DV    +    +T DA  IQR  LR+IL  N+  EYL+    G  G  D   
Sbjct: 4   LLPEFDPADVRAGRDLIHRLTADAAGIQRGVLREILSRNSGTEYLRRFLGGAAGDDDDVR 63

Query: 57  ESFKSCVPLVTHEDLQPYIQRIIDGD--ISPILTGKPITTISRSSGTTQGKPKFLPFNDE 114
           ++FK  VP+  +ED++PY+ R+  G    S +L   PIT +SRSSGT+ G+ K LP   E
Sbjct: 64  DAFKRRVPVSGYEDVKPYVDRVASGGEPSSALLCSDPITCLSRSSGTSGGQQKLLPSTAE 123

Query: 115 LMETTLQIFRTSYAFRNREFPIGKGKA--------LQFIYGSKQSKTKGGLNAGTATTNV 166
            ++  +  +      RN       G+         +  ++     +T  GL   +A T  
Sbjct: 124 ELDRKVFFYAVQALVRNMSLHTDHGEDDDGGGGEGMYLMFAFHGDRTLSGLPIQSALTTY 183

Query: 167 YRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVH 226
           Y S  F+        +C SP E I  P   QS+YC LLCGL+ R  +  V ++FA  LV 
Sbjct: 184 YHSRQFQECDIGGFDKCTSPLEAILCPYGEQSMYCQLLCGLLHRCRVDRVGASFAAGLVR 243

Query: 227 AFRTFELVWEELCDDIREGVLSSRITVPSIRAAMSK--ILKPNPELADLIHKKCSGLSNW 284
             +  E  WEE+C +IR G LS  IT   +R A++   +   NP LAD I  +C+    W
Sbjct: 244 GIKFLENHWEEMCFNIRSGQLSDWITHTPLRDAVTGQYLQGSNPALADEIASECA-RKPW 302

Query: 285 YGLIPELFPNAKYLSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPP 344
            G++  L+P A+Y+  I+TGSM  Y+  L  Y G LPL+S  Y S+E   G N+ P  PP
Sbjct: 303 DGIVRRLWPRARYIRTIVTGSMSQYIPILEVYGGGLPLVSPIYASTECAAGINLRPLDPP 362

Query: 345 ELATFAVLPNIGYFEFI 361
              ++A+LPNI YFEF+
Sbjct: 363 SHVSYALLPNIAYFEFL 379


>gi|218198249|gb|EEC80676.1| hypothetical protein OsI_23093 [Oryza sativa Indica Group]
          Length = 620

 Score =  215 bits (548), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 135/377 (35%), Positives = 194/377 (51%), Gaps = 17/377 (4%)

Query: 1   MLEKMETVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNL--GLNGRTDP-- 56
           +L + +  DV    +    +T DA  IQR  LR+IL  N+  EYL+    G  G  D   
Sbjct: 4   LLPEFDPADVRAGRDLIHRLTADAAGIQRGVLREILSRNSGTEYLRRFLGGAAGDDDDVR 63

Query: 57  ESFKSCVPLVTHEDLQPYIQRIIDGD--ISPILTGKPITTISRSSGTTQGKPKFLPFNDE 114
           ++FK  VP+  +ED++PY+ R+  G    S +L   PIT +SRSSGT+ G+ K LP   E
Sbjct: 64  DAFKRRVPVSGYEDVKPYVDRVASGGEPSSALLCSDPITCLSRSSGTSGGQQKLLPSTAE 123

Query: 115 LMETTLQIFRTSYAFRNREFPIGKGKA--------LQFIYGSKQSKTKGGLNAGTATTNV 166
            ++  +         RN       G+         +  ++     +T  GL   +A T  
Sbjct: 124 ELDRKVFFHAVQALVRNMSLHTDHGEDDDGGGGEGMYLMFAFHGDRTLSGLPIQSALTTY 183

Query: 167 YRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVH 226
           Y S  F+        +C SP E I  P   QS+YC LLCGL+ R  +  V ++FA  LV 
Sbjct: 184 YHSRQFQECDIGGFDKCTSPLEAILCPYGEQSMYCQLLCGLLHRCRVDRVGASFAAGLVR 243

Query: 227 AFRTFELVWEELCDDIREGVLSSRITVPSIRAAMSK--ILKPNPELADLIHKKCSGLSNW 284
             +  E  WEE+C +IR G LS  IT   +R A++   +   NP LAD I  +C+    W
Sbjct: 244 GIKFLENHWEEMCFNIRSGQLSDWITHTPLRDAVTGQYLQGSNPALADEIASECA-RKPW 302

Query: 285 YGLIPELFPNAKYLSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPP 344
            G++  L+P A+Y+  I+TGSM  Y+  L  Y G LPL+S  Y S+E   G N+ P  PP
Sbjct: 303 DGIVRRLWPRARYIRTIVTGSMSQYIPILEVYGGGLPLVSPIYASTECAAGINLRPLDPP 362

Query: 345 ELATFAVLPNIGYFEFI 361
              ++A+LPNI YFEF+
Sbjct: 363 SHVSYALLPNIAYFEFL 379


>gi|357514909|ref|XP_003627743.1| GH3 family protein [Medicago truncatula]
 gi|355521765|gb|AET02219.1| GH3 family protein [Medicago truncatula]
          Length = 298

 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 99/140 (70%), Positives = 117/140 (83%)

Query: 260 MSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRHYAGD 319
           MSK+LKPNPELAD+IHKKC GL+NWYGL+PELFPNAKY+ GIMTGSME YL KLRHYAG+
Sbjct: 1   MSKLLKPNPELADIIHKKCLGLNNWYGLLPELFPNAKYIYGIMTGSMEPYLGKLRHYAGE 60

Query: 320 LPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKP 379
           LPL+++ YG+SEG+I AN+NP LP ELAT+ + P  GYFEFIP      E   LC++P P
Sbjct: 61  LPLVTSIYGASEGFIAANINPKLPLELATYVLFPQNGYFEFIPLTQVKNEGTELCVDPHP 120

Query: 380 VGLTEVKVGEEYEIIVTNVA 399
           VGLTEVKVGEEYEI++TN A
Sbjct: 121 VGLTEVKVGEEYEIVLTNSA 140


>gi|414591478|tpg|DAA42049.1| TPA: hypothetical protein ZEAMMB73_501171, partial [Zea mays]
          Length = 651

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 127/363 (34%), Positives = 203/363 (55%), Gaps = 15/363 (4%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQN-LGLNGRTD----------PESFKSC 62
           ++  E +T  A  IQ+  L +IL  NA  +Y++  LG N   D            +FK  
Sbjct: 56  LQLIEDLTTHAGAIQQRVLGEILAMNAGTDYVRGFLGANDDDDSAEGRHADELAATFKER 115

Query: 63  VPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQI 122
           VP+V +ED++PYI+RI +G  S +++ K IT +  SSGT+ G+PK +P  +E ++    +
Sbjct: 116 VPVVEYEDVKPYIERIANGAPSSLISSKTITELLTSSGTSGGQPKLMPSTEEELDRKTFL 175

Query: 123 FRTSYAFRNREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQS 181
           +       N+    + +G+ +  ++   + KT  GL A    T+ Y+S  F+    +  +
Sbjct: 176 YNLLVPVMNKYVEGLDEGRCMYLLFVKPEMKTPSGLVARPVLTSYYKSRHFRERPDSPYT 235

Query: 182 QCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDD 241
           +  SP+E I   D  QS+Y  LLCGL  R E+  V + FA + + A +  E  W  LCDD
Sbjct: 236 RYTSPNEAILCADSAQSMYAQLLCGLARRGEVLRVGAVFASAFLRALKFLEGHWRALCDD 295

Query: 242 IREG-VLSSRITVPSIRAAMSKIL-KPNPELADLIHKKC-SGLSNWYGLIPELFPNAKYL 298
           IR G V ++R+T  + R A+++++ +P+  LAD I  +C +G ++W G++  L+P  KY+
Sbjct: 296 IRAGRVDAARVTDRACRDAVARVVARPDAALADAIAAECEAGAASWRGIVRRLWPRTKYI 355

Query: 299 SGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYF 358
             I+TGSM  Y+  L  Y G LPL+S  Y SSE + G N+ P   PE   + +LPN+ Y+
Sbjct: 356 DVIVTGSMAQYVPLLEFYGGGLPLVSTMYASSECYFGINLRPLDRPEDVAYTLLPNMCYY 415

Query: 359 EFI 361
           EFI
Sbjct: 416 EFI 418


>gi|414888062|tpg|DAA64076.1| TPA: hypothetical protein ZEAMMB73_443383 [Zea mays]
          Length = 541

 Score =  207 bits (527), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 117/327 (35%), Positives = 181/327 (55%), Gaps = 6/327 (1%)

Query: 78  IIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP-I 136
           I  G+ S IL G+ I  + RSSGT+QG+P+ +P   E +   + ++       ++    +
Sbjct: 23  IAAGERSSILCGEQIVELLRSSGTSQGEPRLMPSISEDIYRRMYLYSLIMPIMSKYIRGL 82

Query: 137 GKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFH 196
           G+GKA+  ++   ++ T  G+   +  T+ Y+S  F      + +   SPDEVI  PD  
Sbjct: 83  GEGKAMYLLFVKAETLTNAGIPVRSVLTSYYKSPQFLQRKHDLYNSYTSPDEVILCPDSQ 142

Query: 197 QSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPSI 256
           QS+YC LLCGL+ R+ +  + + FA + + +    E  W +L  DIR G ++  IT  + 
Sbjct: 143 QSMYCQLLCGLVERQNVVRLGAVFASAFLRSISFLEKHWHDLVTDIRTGRINPSITNAAC 202

Query: 257 RAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRH 315
           R A    L +PNPELAD +   CS  S W G++  L+PN KY+  ++TG+M  Y+  L  
Sbjct: 203 RVATESFLAQPNPELADEVEAICSSES-WKGVLGRLWPNVKYIEAVLTGTMAQYVPMLEF 261

Query: 316 YA-GDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLG-NLESQVL 373
           Y+ G +PL+   Y SSE + G N+ P   P+  ++ +LPN+ YFEF+P   G  L     
Sbjct: 262 YSDGRIPLVCTMYASSESYFGVNLRPLCSPKDVSYTILPNMAYFEFVPLDDGLRLAEDGE 321

Query: 374 CIEP-KPVGLTEVKVGEEYEIIVTNVA 399
            +E  K VGL +VKVG  YE++VT  A
Sbjct: 322 AVEKEKLVGLVDVKVGCYYELVVTTFA 348


>gi|15221934|ref|NP_175300.1| auxin-responsive GH3 family protein [Arabidopsis thaliana]
 gi|12597809|gb|AAG60120.1|AC073555_4 Nt-gh3 deduced protein, putative [Arabidopsis thaliana]
 gi|332194215|gb|AEE32336.1| auxin-responsive GH3 family protein [Arabidopsis thaliana]
          Length = 525

 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 139/384 (36%), Positives = 199/384 (51%), Gaps = 61/384 (15%)

Query: 16  EFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYI 75
           + E +T +A++IQ + L +IL  NA+ EYL    L+G +D   FK  VP+VT++D++PYI
Sbjct: 10  DLEELTSNAKQIQEDVLEEILTLNANTEYLHRF-LHGSSDKVLFKKNVPVVTYDDVKPYI 68

Query: 76  QRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP 135
           +R+ +G+ S +++G PIT   RS+GT+ GK K  P ND+ +E      +  Y    R   
Sbjct: 69  ERVANGEPSDVISGGPITMFLRSTGTSGGKQKVFPVNDKYIE------KLGYVIALRSLA 122

Query: 136 IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDF 195
           + K     F  G +Q K                         AM+  C  P      P  
Sbjct: 123 MSK----HFDSGGEQGK-------------------------AMEFHCTKP------PSA 147

Query: 196 HQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPS 255
             S       GL  R+E+  V + FA  LV A    E  W+ELC +IR G +S  IT   
Sbjct: 148 TPS-------GLP-RDEVVRVGAAFAFVLVRAIDFLEKHWKELCSNIRSGHVSEWITDLE 199

Query: 256 IRAAMSKILK-PNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLR 314
            R A+S IL+ P+  LAD+I ++CS  S W G+I  L+P AKY+  I+TG M  Y+  L 
Sbjct: 200 GRNAVSTILRGPDSILADVIEQECSHKS-WEGIITRLWPKAKYIDCIITGQMSQYIPMLE 258

Query: 315 HYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIP-QRLGNLESQVL 373
            Y+  LP++S  YGSSE   G NV+P   P+  ++   PNI YFEF+P    G++ S   
Sbjct: 259 FYSNKLPIVSTTYGSSESTFGMNVDPLCKPQDTSYTCAPNISYFEFLPVDHKGDMAS--- 315

Query: 374 CIEPKPVGLTEVKVGEEYEIIVTN 397
                 V L +VK+G  YE +VTN
Sbjct: 316 -----IVDLVDVKLGCYYEPVVTN 334


>gi|302825948|ref|XP_002994539.1| hypothetical protein SELMODRAFT_138788 [Selaginella moellendorffii]
 gi|300137467|gb|EFJ04396.1| hypothetical protein SELMODRAFT_138788 [Selaginella moellendorffii]
          Length = 557

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 139/395 (35%), Positives = 209/395 (52%), Gaps = 40/395 (10%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPES---FKSCVPLVTHED 70
           I EFE   ++   IQ E L  IL +     YLQ  G      P+S   +KS VP+V++ED
Sbjct: 4   IAEFEQACENGASIQEELLGGILRKT---HYLQKFG-----SPQSLAAYKSQVPIVSYED 55

Query: 71  LQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFR 130
           +   I++I  G+  PIL       +  SSG    K K +P   E +   ++    S A+ 
Sbjct: 56  VAGVIEKIACGEEGPILCHDQNLLLPTSSG----KGKIIPVTAENISALMRAAEISNAYI 111

Query: 131 NREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVI 190
            R      G+ L   Y   QS TK G+  G  TT  Y   T++       ++  +P E+I
Sbjct: 112 AR-----YGRVLGLYYCGHQSHTKAGIWVGALTT--YLIKTYRGPF----NKFTTPYEMI 160

Query: 191 F-GPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSS 249
             G ++ +  YCHLLC LI R+ ++ + ++FA+ +  A +  +  W+++C+DIR G LSS
Sbjct: 161 ISGSNWRELTYCHLLCALIQRDAVEQIDASFAYIICGALKILQSDWQDICNDIRTGSLSS 220

Query: 250 -RITVPSIRAAMSKILKPNPEL---ADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGS 305
            ++T P ++ A +  L     +   AD I K CS  S W G++  LFP AK +S ++TG+
Sbjct: 221 GKVTHPKLQEAFANFLVNKENIAGTADAIAKICSRES-WSGILSLLFPGAKLVSAVVTGA 279

Query: 306 MEHYLKKLRHYA-GDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQR 364
           M H++ +LR YA G LP+   DY SSEG +G N NP+ P E   F +LP+I Y+EF+P  
Sbjct: 280 MAHFVPELRDYAGGKLPISGKDYYSSEGVLGINTNPASPLEDVVFTILPHIMYYEFLPLG 339

Query: 365 LGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
             N   ++L          EV VG+EYEI++T  A
Sbjct: 340 ANNPAGEILAPH-------EVVVGQEYEIVITTFA 367


>gi|91805833|gb|ABE65645.1| auxin-responsive GH3 family protein [Arabidopsis thaliana]
          Length = 532

 Score =  204 bits (520), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 131/385 (34%), Positives = 190/385 (49%), Gaps = 58/385 (15%)

Query: 17  FETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQ 76
            E +T +  +IQ   L +IL  NA+  YLQ   L G  D ESFK  VP+VT+ED++PYI+
Sbjct: 18  LEDLTSNVTQIQDNVLEEILTLNANTNYLQKFFL-GSFDKESFKKNVPVVTYEDVKPYIE 76

Query: 77  RIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMET-TLQIFRTSYAFRNREFP 135
           R+++G+ S +++ +PIT    S+GT+ G  K +P+N++ ++  T       +   N    
Sbjct: 77  RVVNGEPSNVISARPITGFVLSTGTSGGAQKMMPWNEKYLDNLTFMYDLRMHIISNNVKD 136

Query: 136 IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDF 195
           + KGKA+ F +   +S T  GL A  A+++  +S+ FK           SPDEV   PD 
Sbjct: 137 VEKGKAMMFYFTKLESITPSGLPARVASSSYLKSNYFKNRPSNWYYSYTSPDEVTLCPDN 196

Query: 196 HQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPS 255
            Q+LYCHLLCGL+ R E+  + S FA  +V A +  E  WEELC +IR G LS  IT   
Sbjct: 197 KQNLYCHLLCGLVQRNEVTRMGSIFASVMVRAIKFLEDSWEELCSNIRSGQLSEWITDIG 256

Query: 256 IRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLR 314
            R ++S +L  P+PE AD I + C+    W                              
Sbjct: 257 CRDSVSLVLGGPHPEAADTIEQICNQKC-W------------------------------ 285

Query: 315 HYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLC 374
                           E   G N+NP   PE  ++  +PN+ YFEFIP         V  
Sbjct: 286 ---------------KETQFGLNLNPMCKPEDVSYTFMPNVSYFEFIP---------VDG 321

Query: 375 IEPKPVGLTEVKVGEEYEIIVTNVA 399
            +   V L +VK+G  YE +VTN +
Sbjct: 322 DKNDVVDLADVKLGCCYEAVVTNFS 346


>gi|414590727|tpg|DAA41298.1| TPA: indole-3-acetic acid amido synthetase [Zea mays]
          Length = 454

 Score =  201 bits (512), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 100/264 (37%), Positives = 156/264 (59%), Gaps = 8/264 (3%)

Query: 136 IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDF 195
           + KGKAL F++   ++KT GGL A    T+ Y+S+ F+       +   SP   I   D 
Sbjct: 1   MDKGKALHFLFVKSETKTPGGLAARPVLTSYYKSNHFRNRPFDAYNNYTSPTAAILCADA 60

Query: 196 HQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPS 255
            QS+Y  ++CGL  R+++  V + FA  L+ A R  +L WE+L +DI  G L+ R+T PS
Sbjct: 61  FQSMYAQMVCGLCQRQDVLRVGAVFASGLLRAIRFLQLNWEQLAEDIEAGSLTPRVTDPS 120

Query: 256 IRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRH 315
           +R A++ IL+P+P +A+L+  +CSG  +W G++  ++PN KYL  I+TG+M  Y+  L+H
Sbjct: 121 VREAVAGILRPDPAVAELVRSECSG-GDWAGIVTRIWPNTKYLDVIVTGAMAQYIPTLKH 179

Query: 316 YAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCI 375
           Y+G LP+    Y SSE + G N+ P   P   ++ ++PN+ YFEF+P       SQ+   
Sbjct: 180 YSGGLPMACTMYASSECYFGLNLRPMCDPSEVSYTLMPNMCYFEFLPMGGAVDASQL--- 236

Query: 376 EPKPVGLTEVKVGEEYEIIVTNVA 399
               V L  V+ G EYE+++T  A
Sbjct: 237 ----VDLGRVERGREYELVITTYA 256


>gi|358345209|ref|XP_003636674.1| Indole-3-acetic acid-amido synthetase GH3.6 [Medicago truncatula]
 gi|355502609|gb|AES83812.1| Indole-3-acetic acid-amido synthetase GH3.6 [Medicago truncatula]
          Length = 506

 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 110/305 (36%), Positives = 173/305 (56%), Gaps = 7/305 (2%)

Query: 98  SSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP-IGKGKALQFIYGSKQSKTKGG 156
           SSGT+ G+ K +P  +E +E    ++       ++  P + KGK + F++   ++KT  G
Sbjct: 12  SSGTSGGERKLMPTIEEDLERRSLLYSLLMPVMDQYVPNLDKGKGMYFLFTKSEAKTPAG 71

Query: 157 LNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLV 216
           L A    T+ Y+SS F   +K    +  SP E I   DF+QS+Y  +LCGL   E++  V
Sbjct: 72  LLARPVLTSYYKSSHF---IKNKTHEITSPIETILCLDFYQSMYSQILCGLYQNEQVLRV 128

Query: 217 FSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPSIRAAMSKILKPNPELADLIHK 276
            + FA   + A +  E  W  LC+DI+ G ++  IT   +R ++ KILKPNP+LAD +  
Sbjct: 129 GAVFASGFIRAIKFLEKHWVGLCNDIKTGTMNDEITDQGVRESVMKILKPNPKLADFVEL 188

Query: 277 KCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGA 336
           +C   S W G+I  L+PN+KY+  I+TG+M  Y+  L +Y+  LPL+   Y SSE + G 
Sbjct: 189 ECKKKS-WKGIITRLWPNSKYVDVIVTGTMSQYIPILDYYSNGLPLVCTMYASSECYFGL 247

Query: 337 NVNPSLPPELATFAVLPNIGYFEFIPQRL--GNLESQVLCIEPKPVGLTEVKVGEEYEII 394
           N+NP   P   ++ ++P + YFEF+P      N +S     +   V L +V++G+EYE++
Sbjct: 248 NLNPLCEPSEVSYTLVPTMAYFEFLPLNKIDANADSISATEQEHLVELVDVELGQEYELV 307

Query: 395 VTNVA 399
           VT  A
Sbjct: 308 VTTYA 312


>gi|356514741|ref|XP_003526062.1| PREDICTED: probable indole-3-acetic acid-amido synthetase
           GH3.5-like [Glycine max]
          Length = 117

 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 90/112 (80%), Positives = 108/112 (96%)

Query: 25  ERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDIS 84
           ER+QRETL++ILE+NASAEYLQ+LGLNGRTDPESFK+CVP+VTH++L+PYI RIIDGD S
Sbjct: 3   ERVQRETLKRILEDNASAEYLQSLGLNGRTDPESFKACVPMVTHKELEPYIYRIIDGDAS 62

Query: 85  PILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFPI 136
           PILTGKPITT+S SSGTTQGKPK++P+NDEL ETT+QI++TS+AFRNREFPI
Sbjct: 63  PILTGKPITTMSLSSGTTQGKPKYVPWNDELYETTMQIYQTSFAFRNREFPI 114


>gi|297743855|emb|CBI36825.3| unnamed protein product [Vitis vinifera]
          Length = 548

 Score =  197 bits (502), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 126/396 (31%), Positives = 193/396 (48%), Gaps = 56/396 (14%)

Query: 11  DELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHED 70
           +E ++E E  T  A+ +Q   L++I+  N   EYL+   + G  D   FK  VP++T++D
Sbjct: 11  EEALKELEKFTAKADEVQENILKEIIARNCETEYLKKY-MGGSKDVLEFKQSVPVITYKD 69

Query: 71  LQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFR 130
           + PYIQRI +G+ S +++G PIT +  SSGT+ G+PK +P   E +     ++       
Sbjct: 70  IHPYIQRIANGEDSSLISGHPITEMLCSSGTSGGEPKMMPSIAEDLNRRTFLYNLIMPIM 129

Query: 131 NREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEV 189
           N+  P + +GKA+   +   +  T  GL A    T+ Y+S  F+  ++   +   SPD+ 
Sbjct: 130 NQYIPGLDEGKAMFLYFVKAEMSTPCGLPARAVLTSYYKSKNFRCRVRDAFNDFTSPDQA 189

Query: 190 IFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSS 249
           I   D +QS+YC LL GL+ R ++  + + FA +L+ A    E  W  LC+DIR G L S
Sbjct: 190 ILCTDSNQSMYCQLLAGLVHRHQVLRLGAVFASALLRAISFLERHWVHLCNDIRTGHLDS 249

Query: 250 RITVPSIRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEH 308
            IT P  R++MS IL  PNP LAD I + CS  S W G++                    
Sbjct: 250 SITDPECRSSMSTILSSPNPHLADEIEEICSHPS-WKGML-------------------- 288

Query: 309 YLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIP-----Q 363
                                       N+ P   P    F +LPN+ YFEFIP      
Sbjct: 289 ---------------------------INMKPLCDPADVAFTLLPNMCYFEFIPLGENGT 321

Query: 364 RLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
            L +++ +    + K V L  V++G  YE++VT  A
Sbjct: 322 LLMDMDEEKGVPKEKLVDLVHVRLGCYYELVVTTFA 357


>gi|414887408|tpg|DAA63422.1| TPA: hypothetical protein ZEAMMB73_662398 [Zea mays]
          Length = 456

 Score =  197 bits (500), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 103/268 (38%), Positives = 156/268 (58%), Gaps = 12/268 (4%)

Query: 136 IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDF 195
           + KGKAL F++   ++KT GGL A    T+ Y+S+ FK       +   SP   I   D 
Sbjct: 1   MDKGKALHFLFVKSETKTPGGLAARPVLTSYYKSNHFKNRPFDAYNNYTSPTAAILCADA 60

Query: 196 HQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPS 255
            QS+Y  +LCGL  R+++  V + FA  L+ A R  +L WE+L +DI  G L+ R+T PS
Sbjct: 61  FQSMYAQMLCGLCQRQDVLRVGAVFASGLLRAIRFLQLNWEQLAEDIEAGSLTPRVTDPS 120

Query: 256 IRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRH 315
           +R A++ IL+ +PELA L+  +CS   +W G+I  ++P+ KYL  I+TG+M  Y+  L++
Sbjct: 121 VREAVAGILRADPELAALVRSECSK-GDWAGIITRIWPSTKYLDVIVTGAMAQYIPTLKY 179

Query: 316 YAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQ----RLGNLESQ 371
           Y+G LP+    Y SSE + G N+ P   P   ++ ++PN+ YFEF+P       G   SQ
Sbjct: 180 YSGGLPMACTMYASSECYFGLNLRPMCDPSEVSYTLMPNMCYFEFLPMDSAAASGGDASQ 239

Query: 372 VLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
           +       V L  V+VG EYE+++T  A
Sbjct: 240 L-------VDLARVEVGREYELVITTYA 260


>gi|297845372|ref|XP_002890567.1| hypothetical protein ARALYDRAFT_472573 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297336409|gb|EFH66826.1| hypothetical protein ARALYDRAFT_472573 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 476

 Score =  194 bits (493), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 136/385 (35%), Positives = 197/385 (51%), Gaps = 59/385 (15%)

Query: 17  FETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQ 76
            E +T +  ++Q     +IL  NA+  YLQ+    GR D E FK  VP+VT++D  P   
Sbjct: 2   LEDLTSNVTQLQDN---EILTLNANTNYLQSF-FRGRFDKEIFKKNVPVVTYDD--P--- 52

Query: 77  RIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFPI 136
                  S +++ +PIT    SSGT+ G  K +P+N++ +++ + IF      +N E   
Sbjct: 53  -------SNVISAQPITGFVLSSGTSGGAQKMMPWNEKYLDSCM-IF-GCINVKNVE--- 100

Query: 137 GKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFH 196
            KGKA+ F +   +S T  GL A  A+++  +S+ FK           SPDE+   PD  
Sbjct: 101 -KGKAMMFYFTKLESITPSGLPARVASSSYLKSNYFKNRPSNWYYTYTSPDELTLCPDNK 159

Query: 197 QSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPSI 256
           Q+LYCHLLCGL+ R E+  + S FA            V +EL  +IR G LS  IT    
Sbjct: 160 QNLYCHLLCGLVQRNEVTRMGSIFAS-----------VMKELWSNIRSGQLSEWIT---- 204

Query: 257 RAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRHY 316
                        +A+ I K C+    W G++  L+P AKY+  I+TGSM  Y+  L +Y
Sbjct: 205 -----------DIVANTIEKICNQKC-WKGIVTRLWPKAKYIETIVTGSMVQYVPTLNYY 252

Query: 317 AGD-LPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCI 375
           + D LPL+S  Y SSE   G N+NP   PE  ++  +PN+ YFEFIP         V   
Sbjct: 253 SNDMLPLISTIYASSETQFGLNLNPMCKPEDVSYTFMPNVSYFEFIP---------VDGD 303

Query: 376 EPKPVGLTEVKVGEEYEIIVTNVAV 400
           +   V L +VK+G  YE +VTN  +
Sbjct: 304 KNNVVDLADVKLGCSYEAVVTNFRI 328


>gi|297607505|ref|NP_001060085.2| Os07g0576500 [Oryza sativa Japonica Group]
 gi|255677911|dbj|BAF21999.2| Os07g0576500, partial [Oryza sativa Japonica Group]
          Length = 622

 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 98/262 (37%), Positives = 152/262 (58%), Gaps = 12/262 (4%)

Query: 138 KGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQ 197
           KGK L F++   ++KT+GGL A  A T+VY+S  FK+    M     SP   I   D  Q
Sbjct: 175 KGKGLYFMFVKSETKTRGGLTAWFALTSVYKSEQFKS----MAIAYTSPTAAILCEDAFQ 230

Query: 198 SLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPSIR 257
           S+Y  ++CGL  R ++    + FA +LV A R  +L W +L  DI  G L   +  PS+R
Sbjct: 231 SMYAQMVCGLCQRHDVVRFGAVFAAALVRAIRFLQLNWGQLAADIEAGELGPHVADPSVR 290

Query: 258 AAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRHYA 317
            A+S IL+ + ELA+ +  +CS   +W G+I  ++PN KY+  I+TG+M  Y++ L++Y+
Sbjct: 291 EAVSGILRSDAELAEFVRIECSK-GDWAGIITRIWPNTKYVDAIVTGAMAQYIRTLQYYS 349

Query: 318 GDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEP 377
           G LP++S  Y SSE + G N+ P   P   ++ ++PN  YFEF+P  +G +      ++ 
Sbjct: 350 GGLPIVSTSYASSECFFGINLRPVCDPSEVSYTIMPNTAYFEFLP--VGEVVDATNLVD- 406

Query: 378 KPVGLTEVKVGEEYEIIVTNVA 399
               L  V+VG EYE+++T  A
Sbjct: 407 ----LARVEVGREYEVVITTYA 424


>gi|414867317|tpg|DAA45874.1| TPA: hypothetical protein ZEAMMB73_156027 [Zea mays]
          Length = 478

 Score =  191 bits (484), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 97/270 (35%), Positives = 151/270 (55%), Gaps = 4/270 (1%)

Query: 131 NREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEV 189
           +R  P + KGKAL F++   ++ T GGL A    T+ Y+S  FK           SP   
Sbjct: 9   HRYLPGLDKGKALYFLFVKSETTTPGGLTARPVLTSYYKSEHFKNRPFDPYHDYTSPTAA 68

Query: 190 IFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSS 249
           I   D  QS+Y  ++CGL  R ++  V + FA  L+ A R  +L WE+L DDI  G L+ 
Sbjct: 69  ILCADAFQSMYAQMVCGLCQRHDVLRVGAVFASGLLRAIRFLQLHWEQLADDIESGSLTP 128

Query: 250 RITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHY 309
           R+  PS+R A++++L+ +PELA  +  +CS   +W G++  ++PN +YL  I+TG+M+ Y
Sbjct: 129 RVADPSVRDAVARVLRGDPELARFVRAECS-RGDWAGIVTRVWPNTRYLDVIVTGAMQQY 187

Query: 310 LKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLE 369
           +  L +Y+G LP+    Y SSE + G N+ P   P    + ++PN+GYFEF+P  +    
Sbjct: 188 IPTLEYYSGGLPMACTMYASSECYFGLNLRPMCRPSEVCYTIMPNMGYFEFLP--VDEAS 245

Query: 370 SQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
                   + V L  V+ G EYE+++T  A
Sbjct: 246 GVAPGDAAQLVDLARVEAGREYELVITTYA 275


>gi|296083098|emb|CBI22502.3| unnamed protein product [Vitis vinifera]
          Length = 477

 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 105/291 (36%), Positives = 155/291 (53%), Gaps = 20/291 (6%)

Query: 17  FETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQ 76
            E +T++A+ +Q   L +IL  N   EYL+   L G T  E+FKS +P++ +EDLQP IQ
Sbjct: 26  IEEMTRNADSVQERVLAEILSRNGETEYLKRFKLEGSTVRETFKSKIPVIKYEDLQPEIQ 85

Query: 77  RIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP- 135
           RI +GD S IL+  PI+    SSGT+ G+ K +P   E ++    ++       N   P 
Sbjct: 86  RIANGDRSAILSAHPISEFLTSSGTSAGERKLMPTIQEELDRRQMLYSLLMPVMNLYVPG 145

Query: 136 IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDF 195
           + KGK L F++   +++T GGL A    T+ Y+S  FK       +   SP+E I   D 
Sbjct: 146 LDKGKGLYFLFVKSETRTPGGLLARPVLTSYYKSEHFKTRPYDPYNVYTSPNEAILCADS 205

Query: 196 HQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPS 255
            QS+Y  +LCG+  R+++  + + FA  L+ A R  +L W +L  DIR G LS +IT PS
Sbjct: 206 FQSMYTQMLCGIYERKQVLRLGAVFASGLLRAIRFLQLNWHQLTHDIRTGTLSPKITDPS 265

Query: 256 IRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSM 306
           +R                    C    NW G+I  ++PN KYL  I+TG+M
Sbjct: 266 VR-------------------NCCSKDNWEGIITRIWPNTKYLDVIVTGAM 297


>gi|222635640|gb|EEE65772.1| hypothetical protein OsJ_21454 [Oryza sativa Japonica Group]
          Length = 568

 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 131/408 (32%), Positives = 192/408 (47%), Gaps = 41/408 (10%)

Query: 1   MLEKMETVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNL--GLNGRTDP-- 56
           +L + +  DV    +    +T DA  IQR  LR+IL  N+  EYL+    G  G  D   
Sbjct: 4   LLPEFDPADVRAGRDLIHRLTADAAGIQRGVLREILSRNSGTEYLRRFLGGAAGDDDDVR 63

Query: 57  ESFKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELM 116
           ++FK  VP+  +ED++P                         SGT+ G+ K LP   E +
Sbjct: 64  DAFKRRVPVSGYEDVKP-------------------------SGTSGGQQKLLPSTAEEL 98

Query: 117 ETTLQIFRTSYAFRNREFPIGKGKA--------LQFIYGSKQSKTKGGLNAGTATTNVYR 168
           +  +  +      RN       G+         +  ++     +T  GL   +A T  Y 
Sbjct: 99  DRKVFFYAVQALVRNMSLHTDHGEDDDGGGGEGMYLMFAFHGDRTLSGLPIQSALTTYYH 158

Query: 169 SSTFKAEMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAF 228
           S  F+        +C SP E I  P   QS+YC LLCGL+ R  +  V ++FA  LV   
Sbjct: 159 SRQFQECDIGGFDKCTSPLEAILCPYGEQSMYCQLLCGLLHRCRVDRVGASFAAGLVRGI 218

Query: 229 RTFELVWEELCDDIREGVLSSRITVPSIRAAMSK--ILKPNPELADLIHKKCSGLSNWYG 286
           +  E  WEE+C +IR G LS  IT   +R A++   +   NP LAD I  +C+    W G
Sbjct: 219 KFLENHWEEMCFNIRSGQLSDWITHTPLRDAVTGQYLQGSNPALADEIASECA-RKPWDG 277

Query: 287 LIPELFPNAKYLSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPEL 346
           ++  L+P A+Y+  I+TGSM  Y+  L  Y G LPL+S  Y S+E   G N+ P  PP  
Sbjct: 278 IVRRLWPRARYIRTIVTGSMSQYIPILEVYGGGLPLVSPIYASTECAAGINLRPLDPPSH 337

Query: 347 ATFAVLPNIGYFEFIPQRLGNLES-QVLCIEPKPVGLTEVKVGEEYEI 393
            ++A+LPNI YFEF+     N E  Q        +GL   +VG+ + +
Sbjct: 338 VSYALLPNIAYFEFLEVMDENGEKVQGTTRLDDNLGLYRYRVGDLFTV 385


>gi|75136487|sp|Q6ZLA3.1|GH39_ORYSJ RecName: Full=Probable indole-3-acetic acid-amido synthetase GH3.9;
           AltName: Full=Auxin-responsive GH3-like protein 9;
           Short=OsGH3-9
 gi|34393503|dbj|BAC83064.1| putative Nt-gh3 deduced protein [Oryza sativa Japonica Group]
 gi|215741354|dbj|BAG97849.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 441

 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 93/255 (36%), Positives = 147/255 (57%), Gaps = 12/255 (4%)

Query: 145 IYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQSLYCHLL 204
           ++   ++KT+GGL A  A T+VY+S  FK+    M     SP   I   D  QS+Y  ++
Sbjct: 1   MFVKSETKTRGGLTAWFALTSVYKSEQFKS----MAIAYTSPTAAILCEDAFQSMYAQMV 56

Query: 205 CGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPSIRAAMSKIL 264
           CGL  R ++    + FA +LV A R  +L W +L  DI  G L   +  PS+R A+S IL
Sbjct: 57  CGLCQRHDVVRFGAVFAAALVRAIRFLQLNWGQLAADIEAGELGPHVADPSVREAVSGIL 116

Query: 265 KPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRHYAGDLPLMS 324
           + + ELA+ +  +CS   +W G+I  ++PN KY+  I+TG+M  Y++ L++Y+G LP++S
Sbjct: 117 RSDAELAEFVRIECSK-GDWAGIITRIWPNTKYVDAIVTGAMAQYIRTLQYYSGGLPIVS 175

Query: 325 ADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTE 384
             Y SSE + G N+ P   P   ++ ++PN  YFEF+P  +G +      ++     L  
Sbjct: 176 TSYASSECFFGINLRPVCDPSEVSYTIMPNTAYFEFLP--VGEVVDATNLVD-----LAR 228

Query: 385 VKVGEEYEIIVTNVA 399
           V+VG EYE+++T  A
Sbjct: 229 VEVGREYEVVITTYA 243


>gi|195649943|gb|ACG44439.1| hypothetical protein [Zea mays]
          Length = 375

 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 83/132 (62%), Positives = 107/132 (81%), Gaps = 3/132 (2%)

Query: 11  DELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHED 70
           + +I EFE++T+DA  +QR+TLR+IL +NA AEYL+  GL GRTD  SF++CVPL TH D
Sbjct: 14  EAVIAEFESLTRDAAAVQRDTLRRILADNACAEYLRCRGLAGRTDAASFRACVPLATHAD 73

Query: 71  LQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFR 130
           ++PYI RI DGD SP+LT KPIT+IS SSGTTQGK K+LPFN EL+++T+QI+RTSYAFR
Sbjct: 74  IEPYIARIADGDTSPVLTAKPITSISLSSGTTQGKRKYLPFNQELVKSTMQIYRTSYAFR 133

Query: 131 NREFPI---GKG 139
           NR  P+   G+G
Sbjct: 134 NRAVPVPSRGRG 145


>gi|302825950|ref|XP_002994540.1| hypothetical protein SELMODRAFT_432454 [Selaginella moellendorffii]
 gi|300137468|gb|EFJ04397.1| hypothetical protein SELMODRAFT_432454 [Selaginella moellendorffii]
          Length = 387

 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/314 (35%), Positives = 170/314 (54%), Gaps = 21/314 (6%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPES---FKSCVPLVTHED 70
           I EFE   ++   IQ E L  IL +NAS  YLQ  G      P+S   +KS VP+V++ED
Sbjct: 73  IAEFERACENGASIQEELLGGILRKNASTHYLQKFG-----SPQSLAAYKSQVPIVSYED 127

Query: 71  LQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFR 130
           +   I++I  G+  PIL   P+     SSGT+ GK K +P   E +    +    S A+ 
Sbjct: 128 VAGVIEKIACGEEGPILCHDPVLCFFASSGTSSGKGKIIPVTAENISALRRAAEISNAYI 187

Query: 131 NREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEV 189
            R FP +G G+ L   Y   Q  TK G+  G  TT  Y   T++       +    P E+
Sbjct: 188 TRCFPELGSGRVLGLYYCVDQFHTKAGIWVGALTT--YLIKTYRGPFNKFTT----PYEM 241

Query: 190 IF-GPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLS 248
           I  G ++ +  YCHLLC LI R+ ++ + ++FA+ +  A +  +  W+++C DIR G LS
Sbjct: 242 IISGSNWRELTYCHLLCALIQRDAVEQIDASFAYIISEALKILQSDWQDICKDIRTGSLS 301

Query: 249 S-RITVPSIRAAMSKILKPNPEL---ADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTG 304
           S ++T P ++ A +  L     L   AD+I K CS   +W G++  LFP AK +S ++TG
Sbjct: 302 SGKVTHPKLQEAFATFLVNKENLAGTADVIAKICS-RESWSGILSLLFPGAKLVSAVVTG 360

Query: 305 SMEHYLKKLRHYAG 318
           +M H++ +LR YAG
Sbjct: 361 AMAHFVPELRDYAG 374


>gi|357514911|ref|XP_003627744.1| GH3 family protein [Medicago truncatula]
 gi|355521766|gb|AET02220.1| GH3 family protein [Medicago truncatula]
          Length = 128

 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 84/137 (61%), Positives = 109/137 (79%), Gaps = 9/137 (6%)

Query: 10  VDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHE 69
           +D+ I+EFE ++ DAE++Q  TL++ILE+NASA+YLQNLGLNG+TDPESFK+CVPLVTH+
Sbjct: 1   MDKFIQEFEALSTDAEKVQMNTLKRILEDNASAQYLQNLGLNGKTDPESFKACVPLVTHK 60

Query: 70  DLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAF 129
           D +PYI RIIDGD SPILT KPIT +S SSGTTQ KPK++P+NDE+ ETT+QI +  +A+
Sbjct: 61  DSEPYINRIIDGDASPILTTKPITAMSLSSGTTQRKPKYIPWNDEVFETTVQIHQAFFAY 120

Query: 130 RNREFPIGKGKALQFIY 146
                     K + FIY
Sbjct: 121 L---------KQVHFIY 128


>gi|219884309|gb|ACL52529.1| unknown [Zea mays]
          Length = 547

 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 94/275 (34%), Positives = 144/275 (52%), Gaps = 25/275 (9%)

Query: 136 IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDF 195
           + +G+ +   +   +S+T GG  A    T+ YRS  F        +   SPDE +   D 
Sbjct: 64  LDRGRCMYLYFVKAESRTPGGHPARPVLTSFYRSRHFLERPHDPYTVHTSPDEAVLCVDA 123

Query: 196 HQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPS 255
           +QS+Y  LLCGL+ R ++  V + FA   + A R  E  W+ LC D+R G L + +T  S
Sbjct: 124 YQSMYAQLLCGLVHRADVLRVGAVFASGFLRAIRFLEKHWQRLCRDLRRGALGAEVTDRS 183

Query: 256 IRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRH 315
           +RAA++++L+ +P LAD +  +C+  S W G+I  ++P  KY+  I+TG+M  Y+  L  
Sbjct: 184 VRAAVARVLRADPALADAVEAECARPS-WQGIIRRVWPGTKYIDVIVTGAMAQYIPTLEF 242

Query: 316 YAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCI 375
           Y G LPL    Y SSE + G N+NP   P    + ++P + YFEF+P             
Sbjct: 243 YGGGLPLTCTMYASSESYFGINLNPMCKPSEVAYTLIPTMCYFEFLP-----------LP 291

Query: 376 EPKPVG-------------LTEVKVGEEYEIIVTN 397
           +P P G             L +VK+G EYE++VT 
Sbjct: 292 QPGPGGTDDADPDHRDLVDLVDVKLGHEYELVVTT 326


>gi|302775580|ref|XP_002971207.1| hypothetical protein SELMODRAFT_441348 [Selaginella moellendorffii]
 gi|300161189|gb|EFJ27805.1| hypothetical protein SELMODRAFT_441348 [Selaginella moellendorffii]
          Length = 343

 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 101/284 (35%), Positives = 157/284 (55%), Gaps = 22/284 (7%)

Query: 125 TSYAFRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCC 184
           +S  +  R FP   G  L F Y   Q +TK GL    A+T   +   FKA      S+  
Sbjct: 31  SSCHYLQRCFPSDNGIILGFFYCMDQVETKSGLLVSAASTYALKGERFKA----TSSKYT 86

Query: 185 SPDEVIF-GPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIR 243
           +P EV+  G D+ +  YCH LC L+ R +++ + S F++++  A R     W E+C DIR
Sbjct: 87  TPYEVLVAGSDWRELTYCHWLCALLQRGKVEQIISIFSYTICEAIRMLRAEWREICSDIR 146

Query: 244 EGVLS-SRITVPSIRAA------MSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAK 296
            G L   ++T P++R A         I   +P  A++I + CS   +W G++P LFP AK
Sbjct: 147 AGSLCEGKVTSPNLRQAFLASPVFDGIKGGDPVEAEVISEICS-RDSWSGIVPLLFPRAK 205

Query: 297 YLSGIMTGSMEHYLKKLRHYAGD-LPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNI 355
           ++S ++TGSM+ Y+  LR Y GD +P++  DY SSEG +G N +P   PE   + ++P  
Sbjct: 206 FVSTVVTGSMKLYVPSLRDYVGDQVPIVGLDYFSSEGALGINADPRCHPERVVYTMVPTA 265

Query: 356 GYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
            Y+EF+P    + ++         +GL EV+VGE+YE+++TN A
Sbjct: 266 LYYEFLPVDSTSCDN--------ILGLHEVQVGEQYEVVITNFA 301


>gi|302756647|ref|XP_002961747.1| hypothetical protein SELMODRAFT_77060 [Selaginella moellendorffii]
 gi|300170406|gb|EFJ37007.1| hypothetical protein SELMODRAFT_77060 [Selaginella moellendorffii]
          Length = 463

 Score =  174 bits (442), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 104/274 (37%), Positives = 157/274 (57%), Gaps = 21/274 (7%)

Query: 133 EFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIF 191
           +FP +G G+ L   Y   QS TK G+  G  TT  Y   T++       ++  +P E+I 
Sbjct: 10  DFPELGSGRVLGLYYCGHQSHTKAGIWVGALTT--YLIKTYRGPF----NKFTTPYEMII 63

Query: 192 -GPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSS- 249
            G ++ +  YCHLLC LI R+ ++ + ++FA+ +  A +  +  W+++C DIR G LSS 
Sbjct: 64  SGSNWRELTYCHLLCALIQRDAVEQIDASFAYIISEALKILQSDWQDICKDIRTGSLSSG 123

Query: 250 RITVPSIRAAMSKILKPNPEL---ADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSM 306
           ++T P ++ A +  L     +   AD I K CS  S W G++  LFP AK +S ++TG+M
Sbjct: 124 KVTHPKLQEAFATFLVNKENIAGTADAIAKICSRES-WSGILSLLFPGAKLVSAVVTGAM 182

Query: 307 EHYLKKLRHYA-GDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRL 365
            H++ +LR YA G LP+   DY SSEG +G N NP+ P E   F +LP+I Y+EF+P   
Sbjct: 183 AHFVPELRDYAGGKLPISGKDYYSSEGVLGINTNPASPLEDVVFTILPHIMYYEFLPLGA 242

Query: 366 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
            N   ++L          EV VG+EYEI++TN A
Sbjct: 243 NNPAGEILAPH-------EVVVGQEYEIVITNFA 269


>gi|254425727|ref|ZP_05039444.1| GH3 auxin-responsive promoter superfamily [Synechococcus sp. PCC
           7335]
 gi|196188150|gb|EDX83115.1| GH3 auxin-responsive promoter superfamily [Synechococcus sp. PCC
           7335]
          Length = 597

 Score =  171 bits (433), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 114/388 (29%), Positives = 191/388 (49%), Gaps = 19/388 (4%)

Query: 18  ETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQR 77
           E  T +A+++Q + L  IL       Y +    +   + +SF+S +PL ++E+ +  I  
Sbjct: 53  EQDTYNADKVQEQLLNDILRSENKTLYGKKYNFDS-LNVDSFRSSLPLTSYENYRESIDN 111

Query: 78  IIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREF--- 134
           ++       L  +PIT    SSGTT GK K +P  ++   + ++ F+   A     F   
Sbjct: 112 VVQTGNYSQLVSEPITLFQESSGTT-GKVKLIPRTNKFTLSAMRAFQAIEAVVQSHFQNP 170

Query: 135 PIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSS--TFKAEMKAMQSQCCSPDEVIFG 192
                + L  +  S    T  G+  GT T+     +   FK     +  +  SP  V   
Sbjct: 171 SSSSQRVLALVNTSPTKLTPTGIPRGTGTSGGLNDALQKFKLANYLIDIKYSSPSPVFLI 230

Query: 193 PDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRIT 252
            +   + YCHLL GL+   +I  + + FA ++++A +  E  W +L +DIR+G L + + 
Sbjct: 231 SNTEAAYYCHLLFGLL-DSDINDISANFAATVLNAMKILEKAWTQLVEDIRQGKLYAGLD 289

Query: 253 VP-SIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLK 311
           +  + R  +   L+ NPE A  +         + G++P ++P+   +  I TGSM+ Y  
Sbjct: 290 IDEATRRELEIRLRANPERARELQAYFE--EGFEGILPRIWPSLSCIQCITTGSMQLYTD 347

Query: 312 KLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQ 371
            LR+Y+G +P  S  YG+SE WIG N++P   P    F V P+  +FEFIPQ   + E  
Sbjct: 348 ALRYYSGTVPFFSGSYGASEAWIGVNLDPEREP--PAFVVTPHTAFFEFIPQDAIDQE-- 403

Query: 372 VLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
               +   V LT++K GE YE++VTN++
Sbjct: 404 ----QSATVCLTDLKPGESYEVVVTNMS 427


>gi|30690222|ref|NP_849718.1| indole-3-acetic acid-amido synthetase GH3.17 [Arabidopsis thaliana]
 gi|332192801|gb|AEE30922.1| indole-3-acetic acid-amido synthetase GH3.17 [Arabidopsis thaliana]
          Length = 466

 Score =  168 bits (425), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 99/258 (38%), Positives = 140/258 (54%), Gaps = 14/258 (5%)

Query: 152 KTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFRE 211
           KT  GL A    T+ Y+S  F+       +   SPD+ I   D  QS+YC LLCGL+ R 
Sbjct: 11  KTPSGLMARPVLTSYYKSQHFRNRPFNKYNVYTSPDQTILCQDSKQSMYCQLLCGLVQRS 70

Query: 212 EIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPSIRAAMSKILK-PNPEL 270
            +  V + FA + + A +  E  ++ELC DIR G ++S IT  S R ++  IL  PN EL
Sbjct: 71  HVLRVGAVFASAFLRAVKFLEDHYKELCADIRTGTVTSWITDSSCRDSVLSILNGPNQEL 130

Query: 271 ADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSS 330
           AD I  +C+  S W G++  ++P AKY+  I+TGSM  Y+  L  Y+G LPL+S  Y SS
Sbjct: 131 ADEIESECAEKS-WEGILRRIWPKAKYVEVIVTGSMAQYIPTLEFYSGGLPLVSTMYASS 189

Query: 331 EGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCI------------EPK 378
           E + G N+NP   P   ++ +LPN+ YFEF+P    + E                  E  
Sbjct: 190 ECYFGINLNPLCDPADVSYTLLPNMAYFEFLPVDDKSHEEIHFATHSNTDDDDDALKEDL 249

Query: 379 PVGLTEVKVGEEYEIIVT 396
            V L  V+VG+ YEI++T
Sbjct: 250 IVNLVNVEVGQYYEIVIT 267


>gi|242068293|ref|XP_002449423.1| hypothetical protein SORBIDRAFT_05g010320 [Sorghum bicolor]
 gi|241935266|gb|EES08411.1| hypothetical protein SORBIDRAFT_05g010320 [Sorghum bicolor]
          Length = 293

 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 107/243 (44%), Positives = 136/243 (55%), Gaps = 29/243 (11%)

Query: 120 LQIFRTSYAFRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAM 179
           +QI+RTSYAFRNR FP+  GKALQFIYGS+Q  T GGL A TATTNVYRS  F   M A+
Sbjct: 1   MQIYRTSYAFRNRAFPVEDGKALQFIYGSRQFTTTGGLTATTATTNVYRSEEFMPTMVAI 60

Query: 180 QSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELC 239
           QSQ CSP+ VIFG DF  SLYCHL   L +    +    T A +   A            
Sbjct: 61  QSQVCSPEAVIFGADFAHSLYCHL---LPWSASGRTCAPTSARAPSPA------------ 105

Query: 240 DDIREGVLSSRITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLS 299
                   ++R+T P++R A     +        + +    +    G +P+    A++  
Sbjct: 106 --------ATRVTAPAVRRADPGASR---RGGAQVRRAQQLVRRHPGAVPQRQVRARHHD 154

Query: 300 GIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFE 359
           G+  G++      LR  AG LPL++ +YG SEGW+GANV P  PPE  TF VLPNI YFE
Sbjct: 155 GVH-GALRQEAPPLR--AGGLPLVATEYGVSEGWVGANVEPETPPESVTFTVLPNIAYFE 211

Query: 360 FIP 362
           FIP
Sbjct: 212 FIP 214


>gi|296085546|emb|CBI29278.3| unnamed protein product [Vitis vinifera]
          Length = 495

 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 116/381 (30%), Positives = 180/381 (47%), Gaps = 99/381 (25%)

Query: 17  FETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQ 76
            E +T +A ++Q E L +IL +NA+ EYL+   L+G +D   FK  VP+V +ED++P+I+
Sbjct: 17  LEDLTTNANQVQLEVLEEILTQNANTEYLRGY-LDGHSDKGLFKKKVPIVNYEDIKPHIE 75

Query: 77  RIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFPI 136
           RI +G+ S I++ +PIT +  SSGT+ G+PK +P   E ++      R ++ F N   P+
Sbjct: 76  RIANGEPSRIISAQPITELLTSSGTSGGQPKLMPSTAEDLD------RKTF-FYNLLIPV 128

Query: 137 GKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFH 196
                         +K   GL+ G     ++           ++ +  +P  ++  P   
Sbjct: 129 -------------MNKYVDGLDQGKGMYLLF-----------IKPEISTPSGLMARP--- 161

Query: 197 QSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPSI 256
                        R+E+  V + FA + + A +  E  W ELC +IR G +S  IT PS 
Sbjct: 162 -------------RDEVLRVGAVFASAFLRAIKFLEDHWRELCSNIRTGCVSDWITDPSC 208

Query: 257 RAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRH 315
           R A+S  L KP P+LAD I                                         
Sbjct: 209 RNAVSSFLSKPQPDLADFID---------------------------------------- 228

Query: 316 YAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCI 375
             G LPL+S  Y SSE + G N+ P   P   ++ +LPN+ YFEF+P+  G        +
Sbjct: 229 --GGLPLVSTMYASSECYYGINLKPLSKPSDVSYTLLPNMAYFEFLPE--GER------V 278

Query: 376 EPKPVGLTEVKVGEEYEIIVT 396
           E + VGL +VKVG  YE++VT
Sbjct: 279 EIEVVGLVDVKVGHYYELVVT 299


>gi|354559112|ref|ZP_08978364.1| GH3 auxin-responsive promoter [Desulfitobacterium metallireducens
           DSM 15288]
 gi|353544282|gb|EHC13737.1| GH3 auxin-responsive promoter [Desulfitobacterium metallireducens
           DSM 15288]
          Length = 557

 Score =  155 bits (393), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 115/396 (29%), Positives = 189/396 (47%), Gaps = 28/396 (7%)

Query: 10  VDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHE 69
            D    +F   T++A++I  + L+KIL +N   E+ Q        + E ++  VPL    
Sbjct: 16  ADYFYHKFVKETRNAKKINHKILKKILTDNTKTEFGQKYHFPEIHNSEDYRKVVPLTKFP 75

Query: 70  DLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME-TTLQIFRTSYA 128
             + Y++ I  G    +LT  P+     SSGTT GK K +P      +   L +  T + 
Sbjct: 76  AYESYVEEIAAGK-EDVLTSDPVLYFGLSSGTT-GKQKKIPTTGRSRKIMMLNMMFTQHG 133

Query: 129 FRNREFPIGK--GKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSP 186
                 P  +  G+ L  +   +   T GG+  G+ T     S   ++  K +     SP
Sbjct: 134 ILRHALPEARQGGRGLLLMNMLQSGTTSGGVPTGSGT-----SGGVQSMQKVLPYFWTSP 188

Query: 187 DEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGV 246
            E++   D   + Y HLL  L   E +  + + F  ++V  F   E  W +L  D++ G+
Sbjct: 189 LEILEISDQSIANYLHLLFALQ-EENLTYIMAPFPSAIVQLFGVLEETWPQLMKDLKTGL 247

Query: 247 LSSRITV-PSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGS 305
           +SS++ + P  R+ +   LKP P  A+ + ++      W G+   L+P   Y+S +  GS
Sbjct: 248 ISSQLALKPETRSLLDAKLKPQPRRAERLSREFQ--QGWKGIARRLWPKLAYVSCVAGGS 305

Query: 306 MEHYLKKLRHYAGDLPLMSADYGSSEGWIG--ANVNPSLPPELATFAVLPNIGYFEFIPQ 363
              Y++KL  Y  +LP+ SA YG++E  IG   ++N       AT+ V P   Y+EFIP 
Sbjct: 306 FSVYMEKLNRYTENLPVYSAVYGATEALIGLATSINE------ATYVVTPGAAYYEFIP- 358

Query: 364 RLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
            +  ++S   C  P  + L E+K+GE YEI+VTN +
Sbjct: 359 -ISEMDST--C--PTTLELDELKIGESYEIVVTNYS 389


>gi|392424972|ref|YP_006465966.1| GH3 auxin-responsive promoter-binding protein [Desulfosporosinus
           acidiphilus SJ4]
 gi|391354935|gb|AFM40634.1| GH3 auxin-responsive promoter-binding protein [Desulfosporosinus
           acidiphilus SJ4]
          Length = 565

 Score =  154 bits (390), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 115/387 (29%), Positives = 185/387 (47%), Gaps = 24/387 (6%)

Query: 15  EEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPY 74
            +F   T+ A ++ R+ L+++L  NA  EY       G  + E +K  VPL  + D + Y
Sbjct: 21  RQFVRQTRQAGKLNRQVLQEVLRANAQTEYGLAHKFAGIKNEEEYKRLVPLQVYSDYESY 80

Query: 75  IQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELM-ETTLQIFRTSYAFRNRE 133
           ++ ++ G    ILT +P+     SSGTT GK K++P   +   +  + +        N+ 
Sbjct: 81  LESMLLGH-ENILTAEPVKYFGLSSGTT-GKQKYIPTTGKTQRKMNMSMMFLQQGLLNQA 138

Query: 134 FPIGK--GKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIF 191
            P  K   K L  +   +   T  G+  G+ T     S   K+  +       SP EV+ 
Sbjct: 139 LPAAKRADKGLLLMNMVQGGTTPAGIPTGSGT-----SGGAKSMHQIFPYFWTSPLEVLQ 193

Query: 192 GPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRI 251
             D   + Y HLL  L  R  +  + + FA  ++  F   E    EL +DI +G +S  +
Sbjct: 194 LSDQQTATYLHLLFALKERG-LAYIGAPFASGIIQLFAVLEERGPELVEDIAKGRISQTL 252

Query: 252 TV-PSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYL 310
            + P  RA + + LKP+P  A+ I ++ +      G+   L+P   YLS +++GS   YL
Sbjct: 253 VLEPETRACLEQGLKPDPRRAEEILRELA--KGAAGIASRLWPQMVYLSCVISGSFSIYL 310

Query: 311 KKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLES 370
            KL  Y GDLP+ SA YG++E  IG     + P     +AV P   Y+EFIP    +L  
Sbjct: 311 DKLHFYCGDLPIFSAVYGATEALIGVATEVNKP----YYAVTPGFAYYEFIPIAEADLP- 365

Query: 371 QVLCIEPKPVGLTEVKVGEEYEIIVTN 397
                +P+ + L +++  + YEI+VTN
Sbjct: 366 -----QPRTLNLDQLQKDQSYEIVVTN 387


>gi|343794558|gb|AEM62769.1| jasmonic acid-amino acid-conjugating enzyme [Ipomoea nil]
          Length = 274

 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 77/97 (79%), Positives = 82/97 (84%), Gaps = 3/97 (3%)

Query: 303 TGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIP 362
           TGSME YLKKLRHYAGDLPL+SADYGSSEGWI ANVNP  PPE  TFAVLPNIGYFEFIP
Sbjct: 1   TGSMEPYLKKLRHYAGDLPLLSADYGSSEGWIAANVNPKFPPESVTFAVLPNIGYFEFIP 60

Query: 363 QRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
            +  N++   L +EP PVGLTEVKVGEEYEIIVTN A
Sbjct: 61  LK-DNVDG--LELEPSPVGLTEVKVGEEYEIIVTNFA 94


>gi|53749339|gb|AAU90198.1| unknown protein [Oryza sativa Japonica Group]
          Length = 486

 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 88/241 (36%), Positives = 134/241 (55%), Gaps = 8/241 (3%)

Query: 161 TATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTF 220
            AT    RSS  +     M S C SP EVI G D  Q +YCHLLCGL   + +  + + +
Sbjct: 2   AATAWGIRSSGIRGASPVM-SACVSPAEVILGADHQQQMYCHLLCGLRRWDAVDCIRAPY 60

Query: 221 AHSLVHAFRTFELVWEELCDDIREG-VLSSRITVPSIRAAMSK--ILKPNPELADLIHKK 277
           A +L  A R  +  W +LCDD+  G V +  +T  ++R A+    +  P PELA  + + 
Sbjct: 61  AAALARALRLLQSKWRQLCDDLECGTVCADVVTDAAMRGAVQDGVLAGPCPELAGRVRRI 120

Query: 278 CSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRHYAGD-LPLMSADYGSSEGWIGA 336
           C    +W G++ +L+P+A+Y+S + TG+ME Y   ++H+AG+ LP++  DY +SE  IG 
Sbjct: 121 CE-RDDWRGVLRQLWPDARYISCVTTGTMEQYFPAIKHFAGEALPVLGTDYLASECAIGI 179

Query: 337 NVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVT 396
           N+  + PPE  T+ +LP   YFEFIP  +          E  PV +  V+ G+ YE++ T
Sbjct: 180 NLERTSPPEETTYVLLPRAAYFEFIPFDMDAAGRGAAAAE--PVDIAGVEAGKTYELVAT 237

Query: 397 N 397
            
Sbjct: 238 T 238


>gi|82592860|sp|Q60EY1.2|GH36_ORYSJ RecName: Full=Probable indole-3-acetic acid-amido synthetase GH3.6;
           AltName: Full=Auxin-responsive GH3-like protein 6;
           Short=OsGH3-6
          Length = 488

 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 88/241 (36%), Positives = 134/241 (55%), Gaps = 8/241 (3%)

Query: 161 TATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTF 220
            AT    RSS  +     M S C SP EVI G D  Q +YCHLLCGL   + +  + + +
Sbjct: 2   AATAWGIRSSGIRGASPVM-SACVSPAEVILGADHQQQMYCHLLCGLRRWDAVDCIRAPY 60

Query: 221 AHSLVHAFRTFELVWEELCDDIREG-VLSSRITVPSIRAAMSK--ILKPNPELADLIHKK 277
           A +L  A R  +  W +LCDD+  G V +  +T  ++R A+    +  P PELA  + + 
Sbjct: 61  AAALARALRLLQSKWRQLCDDLECGTVCADVVTDAAMRGAVQDGVLAGPCPELAGRVRRI 120

Query: 278 CSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRHYAGD-LPLMSADYGSSEGWIGA 336
           C    +W G++ +L+P+A+Y+S + TG+ME Y   ++H+AG+ LP++  DY +SE  IG 
Sbjct: 121 CE-RDDWRGVLRQLWPDARYISCVTTGTMEQYFPAIKHFAGEALPVLGTDYLASECAIGI 179

Query: 337 NVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVT 396
           N+  + PPE  T+ +LP   YFEFIP  +          E  PV +  V+ G+ YE++ T
Sbjct: 180 NLERTSPPEETTYVLLPRAAYFEFIPFDMDAAGRGAAAAE--PVDIAGVEAGKTYELVAT 237

Query: 397 N 397
            
Sbjct: 238 T 238


>gi|115462041|ref|NP_001054620.1| Os05g0143800 [Oryza sativa Japonica Group]
 gi|113578171|dbj|BAF16534.1| Os05g0143800 [Oryza sativa Japonica Group]
          Length = 429

 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 88/241 (36%), Positives = 134/241 (55%), Gaps = 8/241 (3%)

Query: 161 TATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTF 220
            AT    RSS  +     M S C SP EVI G D  Q +YCHLLCGL   + +  + + +
Sbjct: 2   AATAWGIRSSGIRGASPVM-SACVSPAEVILGADHQQQMYCHLLCGLRRWDAVDCIRAPY 60

Query: 221 AHSLVHAFRTFELVWEELCDDIREG-VLSSRITVPSIRAAMSK--ILKPNPELADLIHKK 277
           A +L  A R  +  W +LCDD+  G V +  +T  ++R A+    +  P PELA  + + 
Sbjct: 61  AAALARALRLLQSKWRQLCDDLECGTVCADVVTDAAMRGAVQDGVLAGPCPELAGRVRRI 120

Query: 278 CSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRHYAGD-LPLMSADYGSSEGWIGA 336
           C    +W G++ +L+P+A+Y+S + TG+ME Y   ++H+AG+ LP++  DY +SE  IG 
Sbjct: 121 CE-RDDWRGVLRQLWPDARYISCVTTGTMEQYFPAIKHFAGEALPVLGTDYLASECAIGI 179

Query: 337 NVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVT 396
           N+  + PPE  T+ +LP   YFEFIP  +          E  PV +  V+ G+ YE++ T
Sbjct: 180 NLERTSPPEETTYVLLPRAAYFEFIPFDMDAAGRGAAAAE--PVDIAGVEAGKTYELVAT 237

Query: 397 N 397
            
Sbjct: 238 T 238


>gi|388522371|gb|AFK49247.1| unknown [Lotus japonicus]
          Length = 213

 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 80/170 (47%), Positives = 112/170 (65%), Gaps = 8/170 (4%)

Query: 12  ELIEEFETITKDAERIQRETLRKILEENASAEYLQN-LGLNGRTDPES------FKSCVP 64
           ++I  FE ++++A  IQ + L  IL++N   EYL+  LG     + E+      F S VP
Sbjct: 29  DIISWFEYVSQNAGSIQSQILSLILKQNNGVEYLKKWLGNYDIQEMEACALESLFTSVVP 88

Query: 65  LVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFR 124
           L +H D +P+IQRI DGD +P+LT +PITT+S SSGTT+G+ KF+PF     +TTLQIF 
Sbjct: 89  LASHADFEPFIQRIADGDTAPLLTQQPITTLSLSSGTTEGRQKFVPFTRHSAQTTLQIFT 148

Query: 125 TSYAFRNREFPIGK-GKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFK 173
            + A+R+R +P+ + GK L+FIY S   KTKGGL  GTATT+ Y S  F+
Sbjct: 149 LASAYRSRVYPVREGGKVLEFIYSSNTFKTKGGLTVGTATTHCYASEEFR 198


>gi|115474001|ref|NP_001060599.1| Os07g0671500 [Oryza sativa Japonica Group]
 gi|113612135|dbj|BAF22513.1| Os07g0671500, partial [Oryza sativa Japonica Group]
          Length = 243

 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 80/231 (34%), Positives = 130/231 (56%), Gaps = 2/231 (0%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           +EE E +T +A+  Q   L KILE N + EYL    +NG T+  +FK  VP+VT++ + P
Sbjct: 14  LEELEMLTVNAKEAQELILTKILERNQATEYLSKF-MNGSTNISAFKRHVPVVTYDKVHP 72

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNRE 133
           YI RI  G+ S IL G+ I  + RSSGT++G+P+ +P   + ++    ++       N+ 
Sbjct: 73  YILRIATGEESSILCGEYILELLRSSGTSRGEPRLMPSILKDLDRRTYLYSLIMPIMNKY 132

Query: 134 FP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFG 192
              +G+GKA+  ++   ++ T  G+   +  T+ Y+S  F      + +   SPDEVI  
Sbjct: 133 ISGLGEGKAMYLLFVKAETLTDSGIPVRSVLTSYYKSPHFLHRKHDLYNNYTSPDEVILC 192

Query: 193 PDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIR 243
           PD  QS+YC LLCGL+ R+ +  + + FA + + +    E  W +L +DIR
Sbjct: 193 PDSQQSMYCQLLCGLVERQHVLRIGAVFASAFLRSISFLEQHWRDLVNDIR 243


>gi|315258251|gb|ADT91704.1| jasmonate-resistant 4 [Solanum nigrum]
          Length = 84

 Score =  147 bits (371), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 67/83 (80%), Positives = 76/83 (91%)

Query: 197 QSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPSI 256
           QSLYCHLLCGLIFR+E+Q+V S FAHSLVHAFRTFE VWEEL  DIREGVLS+R+TVPSI
Sbjct: 1   QSLYCHLLCGLIFRDEVQVVSSPFAHSLVHAFRTFEQVWEELVVDIREGVLSNRVTVPSI 60

Query: 257 RAAMSKILKPNPELADLIHKKCS 279
           R AMSK+LKP+PELAD+I+ KCS
Sbjct: 61  RLAMSKLLKPDPELADMIYSKCS 83


>gi|312281963|dbj|BAJ33847.1| unnamed protein product [Thellungiella halophila]
          Length = 392

 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 86/210 (40%), Positives = 119/210 (56%), Gaps = 12/210 (5%)

Query: 199 LYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPSIRA 258
           +YC LL  LI R ++  + + FA + +      E  W +LC+DIR G LS  IT P  + 
Sbjct: 1   MYCQLLAALIHRHKVMRLGAVFASAFLRGISYLEQKWSQLCEDIRTGHLSPMITDPGCQM 60

Query: 259 AMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRHYA 317
           AMS +L  PNP LA+ I + C G S+W G+I +L+P AK++  ++TGSM  Y+  L  ++
Sbjct: 61  AMSCLLTSPNPGLANEIEEIC-GRSSWKGIICQLWPKAKFIEAVVTGSMAQYIPALEFFS 119

Query: 318 -GDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIP-QRLGNLE------ 369
            G +PL+   Y SSE + G NV P   P    F +LPN+ YFEFIP  + G L       
Sbjct: 120 QGKIPLVCPMYASSETYFGVNVKPLSKPADVVFTLLPNMCYFEFIPLGKNGTLSLDLDDD 179

Query: 370 SQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
            QV C   K V L  VK+G  YE++VT  A
Sbjct: 180 DQVPC--DKVVDLVNVKLGRYYELVVTTFA 207


>gi|338172905|gb|AEI83221.1| GH3 [Dimocarpus longan]
          Length = 225

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 78/198 (39%), Positives = 114/198 (57%), Gaps = 1/198 (0%)

Query: 17  FETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQ 76
            E IT++AE +Q   L +IL  NA  EYL+   L+G TD ++FKS +P++T+EDLQP IQ
Sbjct: 24  IEEITRNAELVQERVLAEILSRNAEVEYLKRYKLDGATDRDTFKSKLPVITYEDLQPEIQ 83

Query: 77  RIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP- 135
           RI +GD S IL+  PI+    SSGT+ G+ K +P   E ++    ++       N   P 
Sbjct: 84  RIANGDRSNILSAHPISEFLTSSGTSAGERKLMPTIKEELDRRQMLYSLLMPVMNLYVPG 143

Query: 136 IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDF 195
           + KGK L F++   ++KT GGL A    T+ Y+S  FK       +   SP+E I   D 
Sbjct: 144 LDKGKGLYFLFVKSETKTPGGLLARPVLTSYYKSDHFKTRPYDPYNVYTSPNEAILCADS 203

Query: 196 HQSLYCHLLCGLIFREEI 213
            QS+Y  +LCGL+ R ++
Sbjct: 204 FQSMYTQMLCGLLDRLQV 221


>gi|226505398|ref|NP_001146765.1| uncharacterized protein LOC100280367 [Zea mays]
 gi|219888651|gb|ACL54700.1| unknown [Zea mays]
          Length = 279

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 63/95 (66%), Positives = 78/95 (82%)

Query: 302 MTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFI 361
           MTGSME YLKKLRHYAG LPL+SADYG+SEGW+GAN+NP+LP E  T+AVLP  GYFEFI
Sbjct: 1   MTGSMEPYLKKLRHYAGHLPLISADYGASEGWVGANINPTLPLEQVTYAVLPQTGYFEFI 60

Query: 362 PQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVT 396
           P  + N  S +  +E +PVGLTEV+VG+ YE+++T
Sbjct: 61  PLEVENSASSIHYLESEPVGLTEVEVGKTYEVVIT 95


>gi|242068291|ref|XP_002449422.1| hypothetical protein SORBIDRAFT_05g010310 [Sorghum bicolor]
 gi|241935265|gb|EES08410.1| hypothetical protein SORBIDRAFT_05g010310 [Sorghum bicolor]
          Length = 191

 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 62/106 (58%), Positives = 84/106 (79%)

Query: 11  DELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHED 70
           + +I + E +T+DA  +QR+TL +IL +NASA+YL+  GL+GRTD  SF++CVPL TH D
Sbjct: 13  EAVIADLEALTRDAAAVQRDTLCRILGDNASAQYLRCRGLDGRTDAASFRACVPLATHAD 72

Query: 71  LQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELM 116
           ++PYI RI DGD S +LT KPIT++S SSGTTQGK K+LPFN +L+
Sbjct: 73  IEPYIARIADGDTSALLTAKPITSMSLSSGTTQGKRKYLPFNQDLV 118


>gi|379012445|ref|YP_005270257.1| hypothetical protein Awo_c26120 [Acetobacterium woodii DSM 1030]
 gi|375303234|gb|AFA49368.1| hypothetical protein Awo_c26120 [Acetobacterium woodii DSM 1030]
          Length = 558

 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 106/398 (26%), Positives = 199/398 (50%), Gaps = 36/398 (9%)

Query: 11  DELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHED 70
           +E I+ F+ +T++A  + ++ L  +L++NA  EY +    N  T  E ++  VP   ++D
Sbjct: 18  NEKIKNFDYLTENAPSVNKQLLFSMLKKNADTEYGKRYCFNEITTIEDYQKKVPFSIYDD 77

Query: 71  LQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFR---TSY 127
             PYI+R+I G+   +LT  PI   + +SG+    PK +P +    E T++++R   T +
Sbjct: 78  YAPYIERMIAGE-EKLLTNDPIVHYALTSGSVDN-PKKIPVS----EQTVKLYREYATQF 131

Query: 128 AFRNREFPIG----KGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQC 183
           +F      +G    KG+ L  +    ++   G      +   VY   + K  +  M S  
Sbjct: 132 SFAIIARALGEKWKKGRGLNLMEVKFETLPNGLFAGSISGRGVY---SIKNLLFLMFS-- 186

Query: 184 CSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIR 243
            SP E++F  +   + Y HL   L+ R  +  + S F   +    +  E  WE + +DI+
Sbjct: 187 -SPKEIVFPTEIMDTKYAHLRFALMDR-NLSYIVSAFMTGVSDLMKYLENNWELIVEDIK 244

Query: 244 EGVLSSRITVPS-IRAAMSKILKPNPELADLIHKKC-SGLSNWYGLIPELFPNAKYLSGI 301
           +G +   I +P  ++  + + +KPNP+ A  + ++   G      +I  ++P   ++  I
Sbjct: 245 KGTIDPDIKMPDEVKQQLLRQIKPNPKRAAELRREFEKGFDT--PIIKRIWPEFAFVHAI 302

Query: 302 MTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFI 361
            +G    Y  K+RHY GD+P+  + Y +SE  I A  N     E   F ++P+  ++EFI
Sbjct: 303 GSGGFSVYTDKMRHYLGDIPIYFSVYAASES-IMAICNEM---ESQEFVLIPDSAFYEFI 358

Query: 362 PQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
           P  +G  +SQ      + + + +++ G++YEI++TN +
Sbjct: 359 P--VGQEDSQ------ETLTMEQLETGKDYEIVLTNTS 388


>gi|374297323|ref|YP_005047514.1| GH3 auxin-responsive promoter-binding protein [Clostridium
           clariflavum DSM 19732]
 gi|359826817|gb|AEV69590.1| GH3 auxin-responsive promoter-binding protein [Clostridium
           clariflavum DSM 19732]
          Length = 567

 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 111/408 (27%), Positives = 189/408 (46%), Gaps = 35/408 (8%)

Query: 17  FETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQ 76
           FE   + A +   + L +I+++NA   Y +         P+ FK  VPL  +ED + YI+
Sbjct: 23  FEKDLECAAQKNDQLLMEIIKKNAGTAYGKKYDFQSIDSPQKFKKTVPLTQYEDYKEYIE 82

Query: 77  RIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFND---ELMETTLQIFRTSYAFRNRE 133
           R+  G+   +LT + +     SSGTT G  K +P      + +   + +      + N  
Sbjct: 83  RMAKGE-ENVLTSEKVEYFGVSSGTT-GNQKLIPVTKSSRKAISRYMGLLTQGVLYENLS 140

Query: 134 FPIGKGKALQFIYGSKQSKTKGG--LNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIF 191
                G+ L  I      KT+GG  + AGTA          K+  K       +P EV+ 
Sbjct: 141 NKWTYGRGLNLIGMRGSGKTEGGIPICAGTA-------GGMKSMEKIFTYIWTTPVEVLK 193

Query: 192 GPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRI 251
             +     Y HLL  L+ R  + L  + F  S++   R  E  W +L +DIREG +S +I
Sbjct: 194 QGEKFDVNYLHLLFALMDRNLMYLS-AAFIPSILDLLRCLESKWADLVEDIREGKISQKI 252

Query: 252 TVP-SIRAAMSKILKPNPELADLIHKKCS-GLSNWYGLIPELFPNAKYLSGIMTGSMEHY 309
            +   +R  + K +KPNP+ A+ + ++   G+    G++  ++P   ++  +     + Y
Sbjct: 253 LLSDDLRNKLQKKIKPNPKRAEELEREFKIGME---GIVTRIWPKCAFIWSVSGAGFKMY 309

Query: 310 LKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLE 369
           L+K++ Y  DLP+    Y ++EG IG      L    AT+   P   Y+EFI +   + E
Sbjct: 310 LEKVKKYTLDLPIYCGTYAATEGLIGV----ELGLNKATYVAAPKSVYYEFIHE--DDWE 363

Query: 370 SQVLCIEPKPVGLTEVKVGEEYEIIVTNVA-----VAGSLFSRIPICG 412
           ++ +        L E++VGE+YE+++TN A       G +   +  CG
Sbjct: 364 AENIT----TYNLEELRVGEKYEVVITNNAGFYRYRLGDVVKVVGYCG 407


>gi|33113492|gb|AAP94283.1| putative auxin-responsive protein GH3 [Pringlea antiscorbutica]
          Length = 171

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 66/112 (58%), Positives = 84/112 (75%), Gaps = 4/112 (3%)

Query: 290 ELFPNAKYLSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATF 349
           +L+PNAKY+S IMTGSM  YLKKLRHYAG LPL+SADYGS+E WIG NV+P  PPE  +F
Sbjct: 1   KLWPNAKYVSSIMTGSMLPYLKKLRHYAGGLPLVSADYGSTESWIGVNVDPHFPPEDVSF 60

Query: 350 AVLPNIGYFEFIP----QRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN 397
           AV+P   YFEFIP    Q   ++ S    +E KPV L++VK+G+EYE+++T 
Sbjct: 61  AVIPTFSYFEFIPLYRQQNQQDICSDGDFVEEKPVPLSQVKLGQEYELVLTT 112


>gi|291240132|ref|XP_002739974.1| PREDICTED: D11lgp1-like, partial [Saccoglossus kowalevskii]
          Length = 662

 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 119/396 (30%), Positives = 184/396 (46%), Gaps = 39/396 (9%)

Query: 17  FETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQ 76
           F++ T+    +Q E LR +L  NA  EY +            F+   PL  +E  + YI 
Sbjct: 107 FDSDTQKCRLVQEEVLRHVLYHNADTEYGRKFDFPRFRTTGDFRRMHPLTRYESYKHYID 166

Query: 77  RIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTL--------QIFRTSYA 128
           R   G +  +LT   I  I  + GT+ G     P + + +   +        +I R    
Sbjct: 167 RAAMG-VQNVLTKNKIIYIVLTPGTS-GSGSMFPVSKKYLGQFVLPGALPIPEIHRLIPG 224

Query: 129 FRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSST-FKAEMKAMQSQC--CS 185
             N +      K +   +GSK   T+GG+  G  +    RS+T F   + +M   C   S
Sbjct: 225 TDNLQ------KMITIKFGSKPRVTEGGVPMGPVSG--MRSNTPFSFVLMSMLG-CLETS 275

Query: 186 PDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREG 245
           P  +       Q +Y H L GL  R  + ++   FA S+   F T E  W +L  DI  G
Sbjct: 276 PSSIFKITKEPQCMYLHCLFGLKDRT-MGIINGMFAQSVYSLFATIETKWPQLVIDIENG 334

Query: 246 VLSSRITV-PSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTG 304
            + S++ + P +R  ++K L+P+PE A  +  K      + G+I  ++P   Y+ GI TG
Sbjct: 335 YIDSKLEILPQVREELNKHLRPDPERAKEL--KTEFQKGFQGVISRVWPYLNYIVGISTG 392

Query: 305 SMEHYLKKLR-HYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQ 363
           SM+ Y KK+  +YA  +P++S  Y SSEG IG N+ P        + +LP   ++EFIP 
Sbjct: 393 SMKPYAKKINEYYAPGVPIVSYVYSSSEGTIGVNIWPL--ETTPYYVLLPRSNFYEFIPA 450

Query: 364 RLGNLESQVLCIEPKPVGL--TEVKVGEEYEIIVTN 397
                     C E +P  L   E++VG EYEI++TN
Sbjct: 451 P--------ACDETQPATLLADELEVGAEYEIVLTN 478


>gi|444914165|ref|ZP_21234310.1| hypothetical protein D187_06480 [Cystobacter fuscus DSM 2262]
 gi|444715099|gb|ELW55972.1| hypothetical protein D187_06480 [Cystobacter fuscus DSM 2262]
          Length = 548

 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 109/392 (27%), Positives = 182/392 (46%), Gaps = 31/392 (7%)

Query: 15  EEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPY 74
           + F   T+   R+  +TLR IL+ N   ++ +  G       E F+  +P+ T+E  +PY
Sbjct: 10  QRFIEQTRHVARVNVDTLRAILQHNRDTDFGRRHGFASLRTVEDFQRALPVSTYEPFRPY 69

Query: 75  IQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREF 134
           ++RI  G+ + +LT   +  +  +SGTT G+ K LP +   +E   +      A    + 
Sbjct: 70  MERIARGEQN-VLTADRVEYLGITSGTT-GQRKLLPVSRPHLENMRRTMMIGRAVVTEKV 127

Query: 135 PIGK--GKALQFIYGSKQSKTKGGLNAGT----ATTNVYRSSTFKAEMKAMQSQCCSPDE 188
           P  +   + +  +    + +++GGL  G     +T ++ R+++F            SP E
Sbjct: 128 PAARRPSRGMILMNAVLRERSEGGLLTGALTAISTHSMGRAASFA---------FTSPPE 178

Query: 189 VIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLS 248
                    +LY HLL GL  R E+  + + FA  L+      E    +L DDI  GVL 
Sbjct: 179 AFRLRKHADALYLHLLFGLRER-ELGTLMAPFASGLLDMVHLLERRGADLVDDIARGVLR 237

Query: 249 SRITV-PSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSME 307
             + + P  R  +   L P+PE A  + +        +GL+  L+P   Y+S I   S  
Sbjct: 238 PELDLEPEQRRLLQSRLLPDPERAREVSQALE--QGPHGLLRRLWPRLAYVSSITGASFS 295

Query: 308 HYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGN 367
            Y ++L  Y   +PL +A Y S+EG +G      L  E A + ++  + +FEFIP+R  +
Sbjct: 296 LYTRQLTPYLEGVPLSAASYVSTEGILGV----PLELEQAVYCLMVGMAFFEFIPERELD 351

Query: 368 LESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
            ES    +   P  L E   GE YE+++T  A
Sbjct: 352 AESPTTLL---PEQLVE---GEAYEVVLTTQA 377


>gi|300855054|ref|YP_003780038.1| plant auxin-responsive GH3-like protein [Clostridium ljungdahlii
           DSM 13528]
 gi|300435169|gb|ADK14936.1| plant auxin-responsive GH3-like protein [Clostridium ljungdahlii
           DSM 13528]
          Length = 527

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 105/380 (27%), Positives = 178/380 (46%), Gaps = 30/380 (7%)

Query: 27  IQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPI 86
           +  + L KIL+ NA +E             + FK  VPL  +   + YI+R+ +G    I
Sbjct: 1   MNEKVLFKILKSNAKSEIGIKFNFKDIKSIDDFKKQVPLTQYGYYESYIERMANGQ-KNI 59

Query: 87  LTGKPITTISRSSGTTQGKPKFLPFND---ELMETTLQIFRTSYAFRNREFPIGKGKALQ 143
           LT   +     +SGTT GK K +P      ++    + +    Y++ N +     GK L 
Sbjct: 60  LTSDNVEYFGHTSGTT-GKQKLIPCTKRGRKIASKYMALLINKYSYDNFKENWNYGKGLM 118

Query: 144 FIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQSLYCHL 203
                  + TKGG+   +AT     S         +     SP EV+   D   +LY HL
Sbjct: 119 IADIVMTTYTKGGIPICSAT-----SGGMNGIKYILPYLYTSPLEVMTIKDREDALYLHL 173

Query: 204 LCGLIFREEIQLVF--STFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVP-SIRAAM 260
           L  L   EE++L++    F  +++  FR  E  +E L  DIR G + S + +  + R  +
Sbjct: 174 LFAL---EEVKLLYISGVFISNILDLFRVLESKYESLVRDIRRGCIRSSLNIDENTRINL 230

Query: 261 SKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRHYAGDL 320
           +K L PN   AD + ++      + G+   ++PN  Y++ +   +   Y  K+ +Y   L
Sbjct: 231 NKHLSPNASRADQLEREFK--KGFKGISVRIWPNMAYIATVTGANFSIYDDKVNYYTNSL 288

Query: 321 PLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQ-VLCIEPKP 379
           P+ S  Y ++E  IG  +NP +      + ++P+  ++EFIP +  N +S+   C     
Sbjct: 289 PIYSPGYAATEAMIG--INPYVNK--IRYVIIPDTVFYEFIPIKEKNKKSEDTFC----- 339

Query: 380 VGLTEVKVGEEYEIIVTNVA 399
             L E+++GE+YEI++TN A
Sbjct: 340 --LDELEIGEKYEIVITNYA 357


>gi|212723356|ref|NP_001131914.1| uncharacterized protein LOC100193303 [Zea mays]
 gi|194692904|gb|ACF80536.1| unknown [Zea mays]
          Length = 286

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 65/105 (61%), Positives = 78/105 (74%), Gaps = 7/105 (6%)

Query: 302 MTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFI 361
           MTG+MEHY+KKLRHYAG LPL++A+YG+SEGW+GANV P  PPE ATF VLP+I YFEFI
Sbjct: 1   MTGTMEHYVKKLRHYAGGLPLVAAEYGASEGWVGANVEPETPPESATFTVLPDIAYFEFI 60

Query: 362 PQR----LGNLESQVLC---IEPKPVGLTEVKVGEEYEIIVTNVA 399
           P +     G   +   C    EP+PVGLTEV VGE YE++VT  A
Sbjct: 61  PLKAATGHGGGTAGDTCYAEAEPEPVGLTEVTVGEHYEVVVTTFA 105


>gi|317419439|emb|CBN81476.1| GH3 domain-containing protein [Dicentrarchus labrax]
          Length = 574

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 103/388 (26%), Positives = 183/388 (47%), Gaps = 23/388 (5%)

Query: 16  EFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYI 75
           + E  T + +++Q ETL K L +NA+  Y +    +   D + F++  P+ T+E  +  I
Sbjct: 31  KLEADTLNVKQVQEETLLKRLRKNANTCYGREYDFSSIKDSDGFRARHPITTYEHYRELI 90

Query: 76  QRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP 135
           +RI  G+   I+  KP+  ++ +SGT+      L   D   E  LQ          R FP
Sbjct: 91  RRIAAGEEKVIIAEKPL-ILAMTSGTSGASAMLLSTQDTNTEFFLQGVTVCLDAMRRAFP 149

Query: 136 IGKG--KALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGP 193
                 +  +F Y     +++ G+  G        +S+  A  + M +   +P      P
Sbjct: 150 ATDSLQRTTKFFYTPTFRQSEAGIPIGP-------NSSTPASSRHMLNLYTTPAPAFEVP 202

Query: 194 DFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITV 253
               +LY HLL  L     +  + S FA ++ +AF   +  W+EL +DI  G +SS + +
Sbjct: 203 SEKDTLYLHLLFALK-DPSVGTLESNFASTVYYAFSALQDRWQELVEDIERGKVSSALAL 261

Query: 254 -PSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKK 312
            P +R  +  ++KP+PE A  +  +      + G+   L+P+   +  + +GS + Y + 
Sbjct: 262 EPKVRLRLEALMKPDPERAAQL--RVHFQDGFRGIAKRLWPHLHLVLAVDSGSNQIYGEM 319

Query: 313 LR-HYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQ 371
           LR +Y   +P  S  Y ++EG IG N+ P  P     + + P   + EF+P+    LE +
Sbjct: 320 LRGNYCQGVPFYSPFYAATEGLIGVNLWPQEPNR--RYMLCPRSMFCEFLPE--SRLEEE 375

Query: 372 VLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
                P  + + EVK G+ YE+++TN +
Sbjct: 376 T----PHTLLMEEVKEGQNYELVITNAS 399


>gi|295831167|gb|ADG39252.1| AT5G54510-like protein [Capsella grandiflora]
          Length = 177

 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 67/162 (41%), Positives = 95/162 (58%), Gaps = 1/162 (0%)

Query: 136 IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDF 195
           + KGK + F++   +SKT GGL A    T+ Y+SS FK       +   SP++ I  PD 
Sbjct: 17  LDKGKGMYFLFIKSESKTPGGLPARPVLTSYYKSSHFKNRPFDPYTNYTSPNQTILCPDS 76

Query: 196 HQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPS 255
           +QS+Y  +LCGL   +E+  V + FA   + A +  E  W EL  DIR G LSS IT  S
Sbjct: 77  YQSMYSQMLCGLCQHKEVLRVGAVFASGFIRAIKFLEKHWPELARDIRTGTLSSEITDLS 136

Query: 256 IRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKY 297
           +R A+ +ILKP+P+LAD +  +C   S W G+I  ++PN KY
Sbjct: 137 VREAVGEILKPDPKLADFVESECRKTS-WQGIITRIWPNTKY 177


>gi|295831173|gb|ADG39255.1| AT5G54510-like protein [Capsella grandiflora]
          Length = 177

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 67/162 (41%), Positives = 95/162 (58%), Gaps = 1/162 (0%)

Query: 136 IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDF 195
           + KGK + F++   +SKT GGL A    T+ Y+SS FK       +   SP++ I  PD 
Sbjct: 17  LDKGKGMYFLFIKSESKTPGGLPARPVLTSYYKSSHFKNRPFDPYTNYTSPNQTILCPDS 76

Query: 196 HQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPS 255
           +QS+Y  +LCGL   +E+  V + FA   + A +  E  W EL  DIR G LSS IT  S
Sbjct: 77  YQSMYSQMLCGLCQHKEVLRVGAVFASGFIRAIKFLEKHWPELARDIRTGTLSSEITDJS 136

Query: 256 IRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKY 297
           +R A+ +ILKP+P+LAD +  +C   S W G+I  ++PN KY
Sbjct: 137 VREAVGEILKPDPKLADFVESECRKTS-WQGIITRIWPNTKY 177


>gi|295831169|gb|ADG39253.1| AT5G54510-like protein [Capsella grandiflora]
 gi|295831171|gb|ADG39254.1| AT5G54510-like protein [Capsella grandiflora]
 gi|295831175|gb|ADG39256.1| AT5G54510-like protein [Capsella grandiflora]
 gi|345293693|gb|AEN83338.1| AT5G54510-like protein, partial [Capsella rubella]
 gi|345293695|gb|AEN83339.1| AT5G54510-like protein, partial [Capsella rubella]
 gi|345293697|gb|AEN83340.1| AT5G54510-like protein, partial [Capsella rubella]
 gi|345293699|gb|AEN83341.1| AT5G54510-like protein, partial [Capsella rubella]
 gi|345293701|gb|AEN83342.1| AT5G54510-like protein, partial [Capsella rubella]
 gi|345293703|gb|AEN83343.1| AT5G54510-like protein, partial [Capsella rubella]
          Length = 177

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 67/162 (41%), Positives = 95/162 (58%), Gaps = 1/162 (0%)

Query: 136 IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDF 195
           + KGK + F++   +SKT GGL A    T+ Y+SS FK       +   SP++ I  PD 
Sbjct: 17  LDKGKGMYFLFIKSESKTPGGLPARPVLTSYYKSSHFKNRPFDPYTNYTSPNQTILCPDS 76

Query: 196 HQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPS 255
           +QS+Y  +LCGL   +E+  V + FA   + A +  E  W EL  DIR G LSS IT  S
Sbjct: 77  YQSMYSQMLCGLCQHKEVLRVGAVFASGFIRAIKFLEKHWPELARDIRTGTLSSEITDLS 136

Query: 256 IRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKY 297
           +R A+ +ILKP+P+LAD +  +C   S W G+I  ++PN KY
Sbjct: 137 VREAVGEILKPDPKLADFVESECRKTS-WQGIITRIWPNTKY 177


>gi|295831177|gb|ADG39257.1| AT5G54510-like protein [Neslia paniculata]
          Length = 177

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 67/162 (41%), Positives = 95/162 (58%), Gaps = 1/162 (0%)

Query: 136 IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDF 195
           + KGK + F++   +SKT GGL A    T+ Y+SS FK       +   SP++ I  PD 
Sbjct: 17  LDKGKGMYFLFIKSESKTPGGLPARPVLTSYYKSSHFKNRPFDPYTNYTSPNQTILCPDS 76

Query: 196 HQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPS 255
           +QS+Y  +LCGL   +++  V + FA   + A +  E  W EL  DIR G LSS IT  S
Sbjct: 77  YQSMYSQMLCGLCQHKDVLRVGAVFASGFIRAIKFLEKHWPELARDIRTGTLSSEITDLS 136

Query: 256 IRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKY 297
           +R A+ +ILKP+P+LAD +  +C   S W G+I  L+PN KY
Sbjct: 137 VREAVGEILKPDPKLADFVESECRKTS-WQGIITRLWPNTKY 177


>gi|429765316|ref|ZP_19297615.1| GH3 auxin-responsive promoter [Clostridium celatum DSM 1785]
 gi|429186596|gb|EKY27534.1| GH3 auxin-responsive promoter [Clostridium celatum DSM 1785]
          Length = 558

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 103/391 (26%), Positives = 178/391 (45%), Gaps = 24/391 (6%)

Query: 13  LIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQ 72
           L ++F   T ++  +  E L KIL +N    Y +    N       +K  VP+  + D +
Sbjct: 19  LEKKFNKYTLNSRSVNEEVLFKILNKNNECNYGEKYNFNSIRSVNEYKEIVPITDYSDYE 78

Query: 73  PYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFND---ELMETTLQIFRTSYAF 129
            YI  ++ G    IL    +     +SGTT GK K +P      E+    + +    +A+
Sbjct: 79  QYINEMLKGK-KNILITDDVEYFGHTSGTT-GKQKLIPVTKKSREVGSKYMALLIERFAY 136

Query: 130 RNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEV 189
            N +     G+ L        + ++GG+   +AT+    +  F      +     SP EV
Sbjct: 137 NNLKNQWNYGRGLMLADTVMTTYSEGGVPICSATSGGMDAIKF-----ILPKIYTSPYEV 191

Query: 190 IFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSS 249
           +   D + +LY HLL  L   + +  +   F  +++ A R  E   E L  DI++G ++ 
Sbjct: 192 MKIKDKNTALYLHLLFAL-NDKNLTYISGVFISNVLDALRVLEEKSELLVMDIKKGRINR 250

Query: 250 RITV-PSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEH 308
            + +    R  ++K LKPN   AD I  + S    + G+   L+P   Y++ +   +   
Sbjct: 251 NLNIGDENRKKLNKYLKPNAGRADEIELEFS--KGFRGICRRLWPKITYIAAVTGANFSI 308

Query: 309 YLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNL 368
           Y + + +Y   LP+ S  Y ++E  IG  +NP +      + ++P+  ++EFIP    + 
Sbjct: 309 YDEMVNYYTESLPIYSPAYAATEAMIG--INPYISN--IRYVIIPDTVFYEFIPIDESDK 364

Query: 369 ESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
           E  V C       + E+K+GE+YEIIVTN A
Sbjct: 365 EKPVTCC------IDELKIGEKYEIIVTNYA 389


>gi|295831165|gb|ADG39251.1| AT5G54510-like protein [Capsella grandiflora]
          Length = 177

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 66/162 (40%), Positives = 94/162 (58%), Gaps = 1/162 (0%)

Query: 136 IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDF 195
           + KGK + F++   +SKT GGL A    T+ Y+SS FK       +   SP++ I  PD 
Sbjct: 17  LDKGKGMYFLFIKSESKTPGGLPARPVLTSYYKSSHFKNRPFDPYTNYTSPNQTILCPDS 76

Query: 196 HQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPS 255
           +QS+Y  +LCGL   +E+  V + FA   + A +  E  W EL  DIR G LSS IT  S
Sbjct: 77  YQSMYSQMLCGLCQHKEVLRVGAVFASGFIRAIKFLEKHWPELXRDIRTGTLSSEITDLS 136

Query: 256 IRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKY 297
           +R  + +ILKP+P+LAD +  +C   S W G+I  ++PN KY
Sbjct: 137 VREXVGEILKPDPKLADFVESECRKTS-WQGIITRIWPNTKY 177


>gi|115813015|ref|XP_795209.2| PREDICTED: probable indole-3-acetic acid-amido synthetase
           GH3.4-like [Strongylocentrotus purpuratus]
          Length = 922

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 107/388 (27%), Positives = 184/388 (47%), Gaps = 29/388 (7%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           +  +E   K+  R Q E L+ ILE N + EY++  GL+  T     +   PL T+E  +P
Sbjct: 9   VSRYEEAWKNPRRTQEEYLKAILEGNINTEYVKLYGLDSVTSLRDLREKHPLTTYERYRP 68

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNRE 133
           ++ R+  G+   I+TG+       +SGTT GK K LP+    +     ++  +   R + 
Sbjct: 69  FVDRMAKGE-QGIMTGERTIKFGLTSGTT-GKSKMLPYGQSFLTIVSALYVVNIHARVKA 126

Query: 134 FPIGK--GKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIF 191
           F  G    + +      K+  T+ G+  G A       S     +K +     +P E   
Sbjct: 127 FGYGSLLQREINLYTAPKRRYTETGIPIGPA-------SMIPLSLKPLLVIYTTPGEGFQ 179

Query: 192 GPDFHQSLYCHLLCGLIFRE-EIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSR 250
             D + +LY HLL GL  R+  ++ V   F  +++ A +  E  W +   DI  G +S+ 
Sbjct: 180 VEDPNDALYVHLLFGL--RDPNVRSVCCNFTSTVMSALQLIEKRWPDFVRDIEIGTVSTN 237

Query: 251 ITVPSIRAAMSKIL-KPNPE-LADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEH 308
              P I   + + + + +PE  ADL  +   G     G++  ++P  K++    T  ++ 
Sbjct: 238 NVPPEIHQVLVREMGEGDPERAADLKREFEKGFE---GILRRVWPCLKFVQASDTVGIKQ 294

Query: 309 YLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNL 368
             K L+ Y   + L S   G++EG IG N+ P    E   F ++P++G FEFIP      
Sbjct: 295 --KLLKSYLKGVQLFSRSLGATEGIIGINLWPL--QEKDEFVLMPSLGVFEFIP------ 344

Query: 369 ESQVLCIEPKPVGLTEVKVGEEYEIIVT 396
           E+++   +PK + + E++VG  YEI++T
Sbjct: 345 ENEMHDDQPKTLFIDELEVGGVYEILIT 372


>gi|390343757|ref|XP_003725957.1| PREDICTED: indole-3-acetic acid-amido synthetase GH3.3-like
           [Strongylocentrotus purpuratus]
          Length = 656

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 115/399 (28%), Positives = 179/399 (44%), Gaps = 45/399 (11%)

Query: 15  EEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPY 74
           E F+  TKD    Q + L K +       Y Q+    G +  E F    PL +++  Q Y
Sbjct: 91  ESFDCSTKDCSTYQADFLLKKIRRCEDTVYGQDFNFRGISSVEDFIKKHPLTSYDHYQEY 150

Query: 75  IQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPF-NDELMETTLQIFRTSYAFRNR- 132
           I+R+ DG++  +    P   +  +SGTT G  K  P  N+ L + +      S   + R 
Sbjct: 151 IKRVADGEVGVMSYTNP-AFLGMTSGTT-GNAKLFPVSNENLADLSGSAAAVSTDLQTRL 208

Query: 133 --EFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVI 190
             E       +   + G    +++GG+  G  T+ +   S                 E+I
Sbjct: 209 GIEVTGPLVVSCCLLTGVPIGRSEGGIPKGPVTSFMMPDSI---------------KEII 253

Query: 191 FGP--------DFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDI 242
           F          D   ++Y H L  L   E +  V++ FA SL   FR  E  W++L  DI
Sbjct: 254 FSTPLVGYNIMDESTAMYVHALFALR-DENLSAVWAPFASSLYIFFRLLEASWKKLAQDI 312

Query: 243 REGVLSSRITVPSI--RAAMSKILKPNPELADLIHKKCS-GLSNWYGLIPELFPNAKYLS 299
           R G +S  I   S   R  ++  L P PE AD +  +   G  N   ++  L+P    +S
Sbjct: 313 RRGSVSDDIPALSDKDRKEINARLLPMPERADELEMQFRIGFDN---IVSRLWPRMPSIS 369

Query: 300 GIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELAT-FAVLPNIGYF 358
           G  +GSM+ Y+K+L+ Y GDL ++S  Y S+EG IG  +    P +  T +  +P+  ++
Sbjct: 370 GTTSGSMQTYVKRLKKYTGDLQMLSRYYISTEGLIGYAIG--FPDDGQTEYVCIPDGLFY 427

Query: 359 EFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN 397
           EFIP    N  S      P  V + +VK GE YE+++TN
Sbjct: 428 EFIPISNCNESS------PATVLMEDVKKGECYEVVITN 460


>gi|348508857|ref|XP_003441969.1| PREDICTED: GH3 domain-containing protein-like [Oreochromis
           niloticus]
          Length = 596

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 102/388 (26%), Positives = 180/388 (46%), Gaps = 23/388 (5%)

Query: 16  EFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYI 75
           + E  T   + IQ+ETL K L +NA   Y +    +   D + F++C P+ T+   Q  I
Sbjct: 53  KLEADTLKVKEIQQETLLKRLRKNADTYYGRQYDFSSIKDIKEFQACHPITTYTHYQDLI 112

Query: 76  QRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP 135
            RI  G+   I+  KP+  ++ +SGT+      L   D   E  LQ          + FP
Sbjct: 113 NRIAAGEEKLIIAEKPL-ILAMTSGTSGSSAMLLSTKDTNTEFFLQGVTVCLDAMQKAFP 171

Query: 136 IGKG--KALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGP 193
             K   +  +F Y     +++  +  G        +S+  A  + + +   +P      P
Sbjct: 172 ETKSLQRTTKFFYAPTFRQSEARIPIGP-------NSSTPASSRHILNLYTTPAPAFEVP 224

Query: 194 DFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITV 253
               +LY HLL  L     +  + S FA ++ +AF   +  W+EL +DI  G +S+ +++
Sbjct: 225 SEKDTLYLHLLFALK-DPNVGTLESNFASTVFYAFSALQERWQELVEDIERGNISTALSL 283

Query: 254 -PSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKK 312
            P +RA +  ++KP+P+ A  +  +      + G+   L+P+   +  + +GS + Y + 
Sbjct: 284 EPKVRAKLEALMKPDPQRAAQL--RAHFQDGFRGIAKRLWPHLNLVLAVDSGSNQIYGEM 341

Query: 313 LRH-YAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQ 371
           LR  Y   +P  S  Y ++EG IG N+ P        + + P   + EF+P+   + E+ 
Sbjct: 342 LRESYCKGVPFYSPFYAATEGLIGVNLWPQESER--RYLLCPRSMFCEFLPESSLDEEA- 398

Query: 372 VLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
                P  + + EVK GE YE++VTN +
Sbjct: 399 -----PHTLLMEEVKEGENYELLVTNAS 421


>gi|432922300|ref|XP_004080284.1| PREDICTED: GH3 domain-containing protein-like [Oryzias latipes]
          Length = 601

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 99/383 (25%), Positives = 178/383 (46%), Gaps = 23/383 (6%)

Query: 21  TKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIID 80
           T   +  Q ETL K L +NA   Y +    +   D E+F++  P+ T+E  +  IQRI  
Sbjct: 63  TVKVKEAQEETLLKRLRKNADTCYGRQYNFSSIKDSEAFRALHPITTYEHYRELIQRIAA 122

Query: 81  GDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFPIGKG- 139
           G+   I+  +P+  ++ +SGT+      L       E  LQ            FP     
Sbjct: 123 GEQKVIIAERPL-ILAMTSGTSGPSAMLLSTKATNAEFFLQGVAVCLDVMREAFPETDSL 181

Query: 140 -KALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQS 198
            +  +  Y     +++ G+  G        +S+  A  + M +   +P      P    +
Sbjct: 182 QRTAKLFYTPTFRQSEAGIPIGP-------NSSTPASSRHMLNLYTTPAPAFEVPSEKDT 234

Query: 199 LYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITV-PSIR 257
           LY HLL  L     +  + S FA ++ +AF   +  W+EL +D+  G +SS +++ P +R
Sbjct: 235 LYLHLLFALK-DPTVGTLESNFASTVFYAFAALQERWQELVEDVHSGTISSSLSLEPKVR 293

Query: 258 AAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLR-HY 316
            ++  ++KP+P+ A  +     G   + G+   L+P+   +  + +GS + Y + LR HY
Sbjct: 294 TSLEALMKPDPQRAAQLQSHFQG--GFSGIAKRLWPHLHLVLAVDSGSNQIYGEMLREHY 351

Query: 317 AGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIE 376
              +P  S  Y ++EG IG N+ P        + + P   + EF+P+   +LE +     
Sbjct: 352 CKGVPFYSPFYAATEGLIGVNLWPQ--ESRRRYLLCPRSMFCEFLPE--SSLEEET---- 403

Query: 377 PKPVGLTEVKVGEEYEIIVTNVA 399
           P+ + + +VK GE YE+++TN +
Sbjct: 404 PRTLLMEQVKQGESYELVITNAS 426


>gi|390354897|ref|XP_003728434.1| PREDICTED: probable indole-3-acetic acid-amido synthetase
           GH3.5-like [Strongylocentrotus purpuratus]
          Length = 542

 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 111/389 (28%), Positives = 181/389 (46%), Gaps = 29/389 (7%)

Query: 17  FETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQ 76
           F+   ++  + Q E L K + +     Y ++  L   +  E F    PL T++  + YI+
Sbjct: 92  FQKSNENCTKAQSEFLLKTIRKQQDTAYGKDFNLKEISSVEDFLKKHPLTTYDHYRKYIK 151

Query: 77  RIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMET-TLQIFRTSYAFRNREFP 135
           R+  G+   +   KP + + ++SGTT G  K  P ++E M   TL+    + A RN+   
Sbjct: 152 RVAKGEQGVMFHKKP-SVLGKTSGTT-GLAKVFPVSEEYMNNITLRGNAVTSALRNQA-G 208

Query: 136 IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSP---DEVIFG 192
           I   K LQ           G    GT   +V   + F       +   C+P     ++  
Sbjct: 209 IADPKPLQMTCSLLVHGAVGFSEGGTPVGSV---TAFMMSDAIREILFCTPPLGASIVHE 265

Query: 193 PDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRI- 251
           P    S+Y H L  L   E +  ++S FA SL   FR  E+ W  L  DIR G +S ++ 
Sbjct: 266 P---TSMYIHALFALR-DEHLGSIWSPFASSLFIFFRFLEVSWNMLVQDIRSGSISEKLP 321

Query: 252 -TVPSIRAAMSKILKPNPELADLIHKKCS-GLSNWYGLIPELFPNAKYLSGIMTGSMEHY 309
              P  R  +++ L P P+ A+ I ++   G  N   ++  L+P    L G+ +GSM+ +
Sbjct: 322 SLSPRDREELNRFLYPMPDRANEIERQFRMGFDN---IVSRLWPRMPVLYGVTSGSMQPF 378

Query: 310 LKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYF-EFIPQRLGNL 368
           +++L+ Y+GDL ++S  Y S+EG +G       P +  T  V    G F EFIP      
Sbjct: 379 VQRLKKYSGDLKILSGFYISTEGLVGYACE--FPDDGQTKYVCVADGIFCEFIPADYCED 436

Query: 369 ESQVLCIEPKPVGLTEVKVGEEYEIIVTN 397
           E+      P  + + EV+ GE YE+++TN
Sbjct: 437 EN------PGTLLMDEVREGECYELVITN 459


>gi|390332387|ref|XP_003723487.1| PREDICTED: probable indole-3-acetic acid-amido synthetase
           GH3.5-like [Strongylocentrotus purpuratus]
          Length = 642

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 105/382 (27%), Positives = 178/382 (46%), Gaps = 28/382 (7%)

Query: 22  KDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDG 81
           KD  + Q + L+ IL+ N + +Y ++ GL   T     K   PL T+E  +PY+ R+  G
Sbjct: 99  KDPRKAQEDYLKTILKANLNTDYARDFGLASVTSLTDLKKQHPLTTYERYRPYVDRMAKG 158

Query: 82  DISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFPIGKGKA 141
           + + +LTG+    ++ +SGTT GK K +P+   LM    Q+   S   R   F  G G  
Sbjct: 159 ERN-VLTGERTERLALTSGTT-GKSKMIPYGKSLMTIYSQLIALSIELRVNAF--GMGNF 214

Query: 142 LQ----FIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQ 197
           LQ         K   T+ G+  G A       S     MK +     SP +     D   
Sbjct: 215 LQRETTLYTAPKLRYTEAGILMGPA-------SMIPPSMKVILVIYSSPADAFQIEDPID 267

Query: 198 SLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPSIR 257
           S+Y HLL GL  R  ++ +   F  +L+ A R  E  W ++  DI  G +++    P I 
Sbjct: 268 SIYVHLLFGLRDR-NLRSLNCNFTPALISAMRMVEQRWPDIVRDIEIGTVTTTKVSPQIH 326

Query: 258 AAMSKILK-PNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRHY 316
            A+ + +   +PE A  + K+      + G++  ++P   ++  I    ++  L  L+ Y
Sbjct: 327 QALVRAMDGGDPERAAELKKEFE--KGFEGILKRVWPYMTHVQAIDPTGVKEML--LKSY 382

Query: 317 AGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIE 376
              LPL      ++EG +G N+      +   F ++PN+   EFIP+   N++      +
Sbjct: 383 VKGLPLFGHSLVATEGILGINLWLHNQGK-DEFVLMPNVCVLEFIPEE--NIDED----Q 435

Query: 377 PKPVGLTEVKVGEEYEIIVTNV 398
           P+ + + E++VG  YEI++T +
Sbjct: 436 PETLLMDELEVGGVYEIVITQI 457


>gi|390358801|ref|XP_003729340.1| PREDICTED: probable indole-3-acetic acid-amido synthetase
           GH3.5-like [Strongylocentrotus purpuratus]
          Length = 752

 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 110/386 (28%), Positives = 186/386 (48%), Gaps = 33/386 (8%)

Query: 18  ETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQR 77
           E   K+  + Q E L+ ILE N + EY++  GL+  T     +   PL T+E  +P++ R
Sbjct: 207 EEAWKNPRKTQEEYLKAILEVNINTEYVKLYGLDSVTSLRDLREKHPLTTYERYRPFVDR 266

Query: 78  IIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFPIG 137
           +  G+   I+TG+     + +SGTT GK K LP+    +     ++  +   R   F  G
Sbjct: 267 MAKGE-QGIMTGEQTIRFALTSGTT-GKSKMLPYGQSFLTILSTLYMVNIHARVNAF--G 322

Query: 138 KGKALQF---IYGS-KQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGP 193
            G  LQ    +Y + K+  T+  +  G A       S   + MK +     +P E     
Sbjct: 323 YGSLLQREINVYTAPKRRYTETEIPIGPA-------SMIPSSMKPLLVIYATPGEGFQVE 375

Query: 194 DFHQSLYCHLLCGLIFRE-EIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRIT 252
           D + +LY HLL GL  R+  ++ V   F  +++ A +  E  W +   DI  G +S+   
Sbjct: 376 DPNDALYVHLLFGL--RDPNLRSVSCNFTSTVMSAMQLIEKHWPDFVRDIEIGTVSTNNV 433

Query: 253 VPSIRAAMSKIL-KPNPE-LADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYL 310
            P I   + + + + +PE  ADL  +   G     G++  ++P  K++  I T  ++   
Sbjct: 434 PPEIHQVLVREMGEGDPERAADLKREFEKGFE---GILRRVWPCLKFVQAIDTVGIKQ-- 488

Query: 311 KKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLES 370
           K L+ Y   + L S   G++EG IG N+ P    E   F ++P++G  EFIP      E+
Sbjct: 489 KLLKSYLKGVTLFSRALGATEGVIGINLWPV--QEKDEFVLMPSLGVLEFIP------EN 540

Query: 371 QVLCIEPKPVGLTEVKVGEEYEIIVT 396
           ++   +PK + + E++VG  YEI++T
Sbjct: 541 EMHEDQPKTLFIDELEVGGLYEIVIT 566


>gi|62319728|dbj|BAD95281.1| putative auxin-responsive protein [Arabidopsis thaliana]
          Length = 260

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 58/87 (66%), Positives = 68/87 (78%), Gaps = 6/87 (6%)

Query: 313 LRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQV 372
           LRHYAGDLPL+S DYGSSEGWI ANV P L PE ATFAV+PN+GYFEF+P       S+ 
Sbjct: 1   LRHYAGDLPLVSHDYGSSEGWIAANVTPRLSPEEATFAVIPNLGYFEFLPV------SET 54

Query: 373 LCIEPKPVGLTEVKVGEEYEIIVTNVA 399
              E KPVGLT+VK+GEEYE+++TN A
Sbjct: 55  GEGEEKPVGLTQVKIGEEYEVVITNYA 81


>gi|390341982|ref|XP_781035.3| PREDICTED: probable indole-3-acetic acid-amido synthetase
           GH3.4-like [Strongylocentrotus purpuratus]
          Length = 592

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 98/388 (25%), Positives = 186/388 (47%), Gaps = 25/388 (6%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           +  F    K+A + Q + L+ IL+ N   +Y Q+ GL+  T     +   PL T+E  +P
Sbjct: 33  VRRFTESWKNARKSQEDYLKAILKANGQTDYAQDFGLSSVTSMADLRKKHPLTTYERYRP 92

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNRE 133
           Y+ R+  G+   +LT + +   + +SGTT GK K +PF     +   +I   +   R +E
Sbjct: 93  YVDRMAKGE-EGVLTAEHVERFALTSGTT-GKSKMMPFGKSFRKMYHEIVGLAIDLRLKE 150

Query: 134 FPIGKGKALQFIYGSKQSK-TKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFG 192
           F +G  +    IY + + + T+ G+  G A+          +  + +     +P E    
Sbjct: 151 FGVGFLQREMTIYTAPKIRYTEAGILMGPASMK-------NSSNRRLLVMYSTPAEGFRI 203

Query: 193 PDFHQSLYCHLLCGLIFREE-IQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRI 251
            D   S+Y HLL G  FR+  ++ +   F  +L+ A R  E  + ++  DI  G +++  
Sbjct: 204 KDPQDSVYVHLLFG--FRDRNLRNMSCNFTSNLMLAMRMVEQRYPDIIRDIELGTVTTTN 261

Query: 252 TVPSIRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYL 310
             P I   + + +   +PE A  ++++      + G++  ++P  K++  I +  ++  L
Sbjct: 262 VPPEIHQVLVREMGGGDPERAAELNREFE--KGFEGIMKRVWPYMKHVQAIDSTGLKDEL 319

Query: 311 KKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLES 370
             L  Y   LPL    + ++EG IG ++ P    +   + +LP++   EFIP      E+
Sbjct: 320 --LNSYVKGLPLFGFLFAATEGVIGVDIWPRHHGK-DEYVLLPSLSVMEFIP------EA 370

Query: 371 QVLCIEPKPVGLTEVKVGEEYEIIVTNV 398
            +   +P+ + + E++VG  YEI+VT +
Sbjct: 371 HINEDQPETLFIDELQVGGVYEIVVTQM 398


>gi|392427719|ref|YP_006468713.1| GH3 auxin-responsive promoter-binding protein [Desulfosporosinus
           acidiphilus SJ4]
 gi|391357682|gb|AFM43381.1| GH3 auxin-responsive promoter-binding protein [Desulfosporosinus
           acidiphilus SJ4]
          Length = 556

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 104/394 (26%), Positives = 178/394 (45%), Gaps = 42/394 (10%)

Query: 16  EFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYI 75
           +FE  T   E+  +E L++I+E N + ++ +    +   D E +KS VPL  + D Q Y+
Sbjct: 22  KFEKETMAVEQTCKEVLKEIIEINKNTQFGKGHNFSCIKDEEQYKSNVPLSVYSDFQSYV 81

Query: 76  QRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFND---ELMETTLQIFRTSYAFRNR 132
           +R+  G+   +LT + +     SSGTT G  K +P  +   ++    + +      F   
Sbjct: 82  ERMASGE-ENLLTSEAVVFFGLSSGTT-GNQKLIPITERARKIRAMHMSLLTNGVLF--E 137

Query: 133 EFPIGK--GKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVI 190
           +FP  +   K L  +  S   K+K G+  G  ++   R+  + A +        SP E+ 
Sbjct: 138 KFPQTQQFNKGLMMMSLSAVRKSKSGIPMGAGSSGNMRALQWLASITG-----TSPVEIF 192

Query: 191 FGPDFHQSLYCHLLCGLIFREEIQL------VFSTFAHSLVHAFRTFELVWEELCDDIRE 244
             P+   + Y HLL  L  R+ + L            H L H        W  L +DIR 
Sbjct: 193 EEPNQQTANYIHLLFALKERDLLFLNAPLAPTLLALLHQLEHD-------WPSLIEDIRT 245

Query: 245 GVLSSRITVPS-IRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMT 303
           G +   I +   +R  +   ++P+ E A+ + K       +  + P+++P   Y+  I  
Sbjct: 246 GKIDRSIELTDQLRENLEHRIEPDEERAEELTKLFK--EGFEQIAPKIWPKLLYVQCIAG 303

Query: 304 GSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQ 363
           GS   Y++KL+ Y G+ P+ +  Y S+E  IG+     L P    + + P   YFEFIP 
Sbjct: 304 GSFSVYIQKLQFYVGNTPIFTPAYNSTEALIGS----CLWPGKQYYVLTPRTAYFEFIPT 359

Query: 364 RLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN 397
                      IE  P+   ++++G  YEI++TN
Sbjct: 360 ------DNNAGIEALPI--YKLELGNTYEIVLTN 385


>gi|404371973|ref|ZP_10977274.1| hypothetical protein CSBG_03530 [Clostridium sp. 7_2_43FAA]
 gi|404301277|gb|EJZ50437.1| hypothetical protein CSBG_03530 [Clostridium sp. 7_2_43FAA]
          Length = 560

 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 99/389 (25%), Positives = 180/389 (46%), Gaps = 34/389 (8%)

Query: 17  FETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQ 76
           F   TK+ +++  + L  IL +NA +E               FK  VPL  +     YI+
Sbjct: 23  FNKETKNFKKVNNDLLFDILSKNARSEIGDKFEFKDILSVSDFKKKVPLTDYSYYDNYIE 82

Query: 77  RIIDGDISPILTGKPITTISRSSGTTQGKPKFLPF-NDELMETT--LQIFRTSYAFRNRE 133
           R+ +G+   ILT + +     +SGTT GK K +P      M+    + +  T +++ N +
Sbjct: 83  RMANGE-KNILTTQNVEYFGNTSGTT-GKQKLIPVTKSSRMKAAKYMALLMTRFSYNNFK 140

Query: 134 FPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQS----QCCSPDEV 189
                G+ L        + T GG+   +AT+           +  M+S       SP EV
Sbjct: 141 ENWNYGRGLMIADVVMNTYTDGGIPICSATS---------GGINGMKSFLPYLYTSPYEV 191

Query: 190 IFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSS 249
           +   D   SLY H+L GLI  +++  +   F  +++   R  E   + L  DIR+G +S 
Sbjct: 192 MKIKDKEVSLYLHVLFGLI-EKKLLYISGIFISNILDLLRVMEKSSDMLVKDIRKGRVSK 250

Query: 250 RITVPS-IRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEH 308
            + +    R A++K L PN   AD +  +      + G+   ++P  +Y++ +   +   
Sbjct: 251 TLNIDEETRKALNKYLSPNASRADELESEFK--KGFKGICRRVWPELQYIAAVTGANFTI 308

Query: 309 YLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIP-QRLGN 367
           Y + + +Y+G +P+ S  Y +SEG IG  +NP +      + ++P+  ++EFIP + L  
Sbjct: 309 YDEMVNYYSGSIPIHSPCYAASEGIIG--MNPYVKS--IRYVIIPDTVFYEFIPSEELNK 364

Query: 368 LESQVLCIEPKPVGLTEVKVGEEYEIIVT 396
                 C +       E+++G+ YE+++T
Sbjct: 365 NNPMTFCAD-------ELEIGKSYELVIT 386


>gi|410895627|ref|XP_003961301.1| PREDICTED: GH3 domain-containing protein-like [Takifugu rubripes]
          Length = 604

 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 100/390 (25%), Positives = 181/390 (46%), Gaps = 25/390 (6%)

Query: 15  EEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPY 74
            + E+ T + +R+Q ETL+K L + A+  Y +       TD   F++  P+ T+E  +  
Sbjct: 60  RKLESDTLNVKRVQEETLQKRLRKAANTGYGKKYDFRSITDSNVFRARHPITTYEHYRDL 119

Query: 75  IQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREF 134
           I  I  G+   I+  KP   ++ +SGT+      L   D   +  LQ            F
Sbjct: 120 ISCIAAGEEGVIIAEKP-QILAMTSGTSGASAMLLSTKDTTSDFFLQGVSVCLDIMRLSF 178

Query: 135 PIGKG--KALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFG 192
           P      +  +F Y     +++ G+  G        +S+  A  + M +   +P      
Sbjct: 179 PETDSLQRTAKFFYTPTFRQSEAGIPIGP-------NSSTPASSRHMLNLYTTPAPAFEV 231

Query: 193 PDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRIT 252
                +LY HLL  L     + ++ + FA ++ +AF   +  W+EL  DI  G +SS + 
Sbjct: 232 LSEKDTLYLHLLFALK-DPTVGILEANFASTIFYAFSALQDRWQELVKDIELGTVSSALA 290

Query: 253 V-PSIRAAMSKILKPNPELADLIHKKCSGLSNW-YGLIPELFPNAKYLSGIMTGSMEHYL 310
           + P++R+ +  ++KP+P+ A  I   C+       G+   L+P    +  + +GS + Y 
Sbjct: 291 LEPTLRSRLEALMKPDPKRASQI---CAHFQKGSRGIAKRLWPRLHLVLAVDSGSNQIYG 347

Query: 311 KKLR-HYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLE 369
           + LR +Y   +P  S  Y ++EG IG N+ P  P     + + P   + EF+P+   +LE
Sbjct: 348 EMLRENYCLGVPFYSPFYAATEGLIGVNLWPQEPNR--RYLLCPRSMFCEFLPE--SSLE 403

Query: 370 SQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
            +     P+ + + EVK G +YE+++TN +
Sbjct: 404 DET----PQTLLMEEVKEGHKYELVITNAS 429


>gi|291190284|ref|NP_001167226.1| GH3 domain-containing protein [Salmo salar]
 gi|223648758|gb|ACN11137.1| GH3 domain-containing protein precursor [Salmo salar]
          Length = 643

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 99/390 (25%), Positives = 178/390 (45%), Gaps = 25/390 (6%)

Query: 16  EFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYI 75
           + E  T++  ++Q ETL K L + A   Y +    +   D E+F++  P+ T+E  +  +
Sbjct: 99  KLEADTQNIRQVQEETLLKRLRKTADTRYGKQYDFSSIKDCEAFRTRHPVTTYEHYRELV 158

Query: 76  QRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP 135
            R+  G+   ++  KP+  ++ +SGT+      L   D   E  LQ          R FP
Sbjct: 159 ARVAAGEEKVLIAEKPL-ILAMTSGTSGASAMLLSTKDTNTEFFLQGVAVCLDAMRRAFP 217

Query: 136 IGKG--KALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGP 193
                 +  +  Y     +++ G+  G        +S+  A  + M +   +P      P
Sbjct: 218 ATDSLQRTTKLFYSPTFRQSEAGIPIGP-------NSSTPASSRHMLNLYTTPAPAFQVP 270

Query: 194 DFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITV 253
               +LY HLL  L     +  + S FA ++ +AF   +  W+EL +DI+ G +S  + +
Sbjct: 271 SERDTLYLHLLFALK-DPSVGTLESNFASTVFYAFSALQERWQELVEDIKLGRVSPALAL 329

Query: 254 -PSIRAAMSKILKPNPELAD--LIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYL 310
            P +RA++   +KP+PE A   L H +      + G+   L+P    +  + +GS + Y 
Sbjct: 330 EPGVRASLEGQMKPDPERATQLLTHFQ----QGFVGIARRLWPQLNLVLAVDSGSNQIYG 385

Query: 311 KKLR-HYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLE 369
           + LR  Y   +   S  Y ++EG IG N+ P    E   + + P   + EF+P+   + E
Sbjct: 386 EMLRERYCQGIRFYSPFYAATEGLIGVNLWPE--EERRRYLLCPRSMFCEFLPEASLDQE 443

Query: 370 SQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
           +     E   + + EV+ G  YE++VTN +
Sbjct: 444 TP----EKHTLLMEEVQEGHSYELVVTNAS 469


>gi|255527974|ref|ZP_05394814.1| GH3 auxin-responsive promoter [Clostridium carboxidivorans P7]
 gi|255508335|gb|EET84735.1| GH3 auxin-responsive promoter [Clostridium carboxidivorans P7]
          Length = 523

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 98/374 (26%), Positives = 167/374 (44%), Gaps = 28/374 (7%)

Query: 32  LRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPILTGKP 91
           L KIL+ N  +E             + FK  VPL  +   + YI+R+ +G+   +L    
Sbjct: 2   LFKILKLNYKSEIGIKFNFRNIKSIDDFKKQVPLTEYLYYEDYIERMANGE-KKVLISDK 60

Query: 92  ITTISRSSGTTQGKPKFLPFND---ELMETTLQIFRTSYAFRNREFPIGKGKALQFIYGS 148
           +     +SGTT GK K +P      ++    + +    Y++ N +     GK L      
Sbjct: 61  VEYFGHTSGTT-GKQKLIPCTKRSRKIASKYMALLINKYSYDNFKENWNYGKGLMIADMV 119

Query: 149 KQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLI 208
             + TK G+   +AT     S       + +     SP EV+   D   +LY HLL  L 
Sbjct: 120 MTTYTKAGIPICSAT-----SGGMNGIKRILPYLYTSPIEVMKIKDREAALYLHLLFAL- 173

Query: 209 FREEIQLVF--STFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVP-SIRAAMSKILK 265
             +E+ L++    F  +++  FR  E   E L  DIR G +S+ + +  S R +++K+L 
Sbjct: 174 --KEVGLLYIGGVFISNILDLFRVLESKHESLVRDIRRGRISNNLNIDESTRCSLNKLLS 231

Query: 266 PNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRHYAGDLPLMSA 325
           PN   A     +C     + G+   ++PN  Y+  +   +   Y  K+ +Y   L + S 
Sbjct: 232 PNAGRA--YQLECEFKKGFKGISKRIWPNLLYIITVTGANFSIYDDKVNYYTNSLSIYSP 289

Query: 326 DYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEV 385
            Y ++E  +G  +NP    +   + ++P+  ++EFIP   G               L E+
Sbjct: 290 GYAATEAMMG--INPY--AKKIRYIIIPDTVFYEFIPIEDGKANIN------HTYRLDEL 339

Query: 386 KVGEEYEIIVTNVA 399
           KVG++YEI++TN A
Sbjct: 340 KVGKKYEIVITNYA 353


>gi|444914164|ref|ZP_21234309.1| hypothetical protein D187_06479 [Cystobacter fuscus DSM 2262]
 gi|444715098|gb|ELW55971.1| hypothetical protein D187_06479 [Cystobacter fuscus DSM 2262]
          Length = 580

 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 98/392 (25%), Positives = 176/392 (44%), Gaps = 31/392 (7%)

Query: 15  EEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPY 74
           ++F    +   R+  +TLR IL+ N   ++ +  G       E F+  +P+ T+E  +PY
Sbjct: 42  QDFAEQARHTARVNADTLRAILQHNQDTDFGRRHGFASLHTVEDFQRALPVSTYEPFRPY 101

Query: 75  IQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREF 134
           ++RI  G+ + +LT   +  +  +SGTT G+ K LP     +    +           + 
Sbjct: 102 MERIARGEQN-VLTADRVEYLGITSGTT-GQNKLLPVTRPHLRHLQRATTIGLDVVAEQL 159

Query: 135 PI--GKGKALQFIYGSKQSKTKGGLNAGT----ATTNVYRSSTFKAEMKAMQSQCCSPDE 188
           P      + +  +      +++GGL  G     AT ++ R+++F            SP +
Sbjct: 160 PAIHRPTRGMILMNAELHERSEGGLLMGALAAIATQSLGRAASFA---------LTSPPD 210

Query: 189 VIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLS 248
                    +LY HLL GL  R ++  + + FA  L+      E  W++L +D+  GV+ 
Sbjct: 211 AFSMRSHADALYLHLLFGLRER-KLGYIMAPFATGLLDMVHLLEQRWQDLMEDLALGVVR 269

Query: 249 SRITV-PSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSME 307
             + + P  R  +   ++P PE    + +        +GL+  L+P   + S I   S  
Sbjct: 270 PALDLEPKQRRRLQSRMRPAPERVRELTQAFE--QGPHGLLRRLWPGLAFASSITGASFS 327

Query: 308 HYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGN 367
            Y ++L  Y   +PL +A+Y S+E  +G     +L    A + +L    +FEFIP++  +
Sbjct: 328 LYTQQLAPYLEGVPLYAANYVSTESTLGL----ALELGRAVYCLLVGAAFFEFIPEQELD 383

Query: 368 LESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
            ES    +   P  L E   GE YE+++T  A
Sbjct: 384 AESPTTLL---PEQLVE---GEAYELVLTTQA 409


>gi|384460126|ref|YP_005672546.1| Plant auxin-responsive GH3-like protein [Clostridium acetobutylicum
           EA 2018]
 gi|325510815|gb|ADZ22451.1| Plant auxin-responsive GH3-like protein [Clostridium acetobutylicum
           EA 2018]
          Length = 564

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 186/400 (46%), Gaps = 29/400 (7%)

Query: 7   TVDVDELIEE-FETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPL 65
           ++D+  +++  FE  TK+  ++  E L KIL+ N  +E               FK  VP+
Sbjct: 10  SIDLGGIVKRNFEKETKNCGKVNEEVLFKILKSNDKSEIGIKFKFKDIKSIRQFKDSVPI 69

Query: 66  VTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME-----TTL 120
             ++D + YI R+ DG+   +L  + +     +SGTT GK K +P              L
Sbjct: 70  TEYKDYEKYINRMADGE-GNVLMSEKVEYFGHTSGTT-GKQKLVPCTKNSRRRASKYMAL 127

Query: 121 QIFRTSYAFRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQ 180
            + R  Y      +   +G  +  I  +  + TKG +   +AT     S   K     + 
Sbjct: 128 LVNRFCYDNFKENWNYARGMMIADIVMT--TYTKGKIPICSAT-----SGGMKGIKHLLP 180

Query: 181 SQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCD 240
               SP EV+   D   +LY HLL GL   EE+  +   F  +++  FRT E   + L  
Sbjct: 181 YLYTSPIEVMEIKDKETALYLHLLFGLE-EEELLYISGVFISNILDLFRTLEKNNKALVR 239

Query: 241 DIREGVLSSRITVP-SIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLS 299
           DI++G +S  + +   +R  ++K LKPN + A  + K+      + G+   ++PN  Y++
Sbjct: 240 DIQKGSISEELNIDEGLRKVLNKKLKPNNKRAMELEKEFK--KGFKGIAKRIWPNLLYIA 297

Query: 300 GIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFE 359
            +   +   Y  K+ +Y   +P+ SA YGS+E  IG  +NP     L  + + P+  ++E
Sbjct: 298 SVTGANFSIYNDKVYYYIDSIPIYSAAYGSTEAMIG--INPYASKVL--YVITPSAVFYE 353

Query: 360 FIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
           FIP      ES    +      L+E+K+G  YE+++TN A
Sbjct: 354 FIPIGEKGEESFDTLL------LSELKLGGRYEVVITNYA 387


>gi|260833554|ref|XP_002611722.1| hypothetical protein BRAFLDRAFT_63587 [Branchiostoma floridae]
 gi|229297093|gb|EEN67732.1| hypothetical protein BRAFLDRAFT_63587 [Branchiostoma floridae]
          Length = 774

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 102/395 (25%), Positives = 181/395 (45%), Gaps = 28/395 (7%)

Query: 16  EFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYI 75
           + E   ++A  +Q E L + L E+A  EY +       T  E ++S  PL  +E  + Y+
Sbjct: 228 KLERDCENAAAVQEEVLLQRLREHADTEYGRTYRFADVTSREDYRSSHPLTRYEHYREYV 287

Query: 76  QRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPF-NDELMETTLQIFRTSYAFRNREF 134
            R+I G+   +   KPI     +SGT+ GK   +P    + +   LQ    + +     F
Sbjct: 288 DRMIAGEEMVLTAFKPI-VFGTTSGTS-GKYSIIPMGQKQRVNFFLQGVTVALSCMLEGF 345

Query: 135 PIGKG--KALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFG 192
           P      K L+  +     ++  G+  G        +S+  A  +AM +   +P      
Sbjct: 346 PESDNLQKDLKIFHMPHFRESAAGIPIGP-------NSSSPANSQAMLNLYSTPKPGFDI 398

Query: 193 PDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRIT 252
               ++LY HLL  L  R  + ++ + F+  +  A    E  WE+L  DI +G +   + 
Sbjct: 399 MSEREALYVHLLFALKDR-NLGIIEANFSFRVHTALVMMEACWEQLVTDIEKGYVDPNLD 457

Query: 253 V-PSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLK 311
           +   IRA ++++LKP+   A  + ++      + G++  ++P    +    TGS + Y +
Sbjct: 458 IQDDIRAELNQLLKPDLGRAQELREEFQ--KGFDGIVRRVWPFMGLILATDTGSFDLYRQ 515

Query: 312 KLR-HYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLES 370
           KL+ HY   +P+ S  YG++EG +G N+ P    E   + + P    FE IP    + + 
Sbjct: 516 KLKSHYCKGIPMYSPIYGATEGLVGVNIWPK--DEDRHYILCPRSMVFELIPVDRSDQD- 572

Query: 371 QVLCIEPKPVGLTEVKVGEEYEIIVTNVAVAGSLF 405
                +P  V L + +VG  YE+++TN   AG L+
Sbjct: 573 -----QPDTVWLEQAQVGGIYELVITN---AGGLY 599



 Score = 44.7 bits (104), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 2/96 (2%)

Query: 16  EFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYI 75
           + E   ++A  +Q E L + L E+A  EY +       T  E ++S  PL  +E  + Y+
Sbjct: 4   KLERDCENAAAVQEEVLLQRLREHADTEYGRTYRFADVTSREDYRSSHPLTRYEHYREYV 63

Query: 76  QRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPF 111
            R+I G+   +   KPI     +SGT+ GK   +P 
Sbjct: 64  DRMIAGEEMVLTAFKPI-VFGTTSGTS-GKYSIIPM 97


>gi|15896652|ref|NP_350001.1| plant auxin-responsive GH3-like protein [Clostridium acetobutylicum
           ATCC 824]
 gi|337738615|ref|YP_004638062.1| plant auxin-responsive GH3-like protein [Clostridium acetobutylicum
           DSM 1731]
 gi|15026498|gb|AAK81341.1|AE007838_5 Homolog of plant auxin-responsive GH3-like protein [Clostridium
           acetobutylicum ATCC 824]
 gi|336291695|gb|AEI32829.1| plant auxin-responsive GH3-like protein [Clostridium acetobutylicum
           DSM 1731]
          Length = 563

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 186/400 (46%), Gaps = 29/400 (7%)

Query: 7   TVDVDELIEE-FETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPL 65
           ++D+  +++  FE  TK+  ++  E L KIL+ N  +E               FK  VP+
Sbjct: 9   SIDLGGIVKRNFEKETKNCGKVNEEVLFKILKSNDKSEIGIKFKFKDIKSIRQFKDSVPI 68

Query: 66  VTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME-----TTL 120
             ++D + YI R+ DG+   +L  + +     +SGTT GK K +P              L
Sbjct: 69  TEYKDYEKYINRMADGE-GNVLMSEKVEYFGHTSGTT-GKQKLVPCTKNSRRRASKYMAL 126

Query: 121 QIFRTSYAFRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQ 180
            + R  Y      +   +G  +  I  +  + TKG +   +AT     S   K     + 
Sbjct: 127 LVNRFCYDNFKENWNYARGMMIADIVMT--TYTKGKIPICSAT-----SGGMKGIKHLLP 179

Query: 181 SQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCD 240
               SP EV+   D   +LY HLL GL   EE+  +   F  +++  FRT E   + L  
Sbjct: 180 YLYTSPIEVMEIKDKETALYLHLLFGLE-EEELLYISGVFISNILDLFRTLEKNNKALVR 238

Query: 241 DIREGVLSSRITVP-SIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLS 299
           DI++G +S  + +   +R  ++K LKPN + A  + K+      + G+   ++PN  Y++
Sbjct: 239 DIQKGSISEELNIDEGLRKVLNKKLKPNNKRAMELEKEFK--KGFKGIAKRIWPNLLYIA 296

Query: 300 GIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFE 359
            +   +   Y  K+ +Y   +P+ SA YGS+E  IG  +NP     L  + + P+  ++E
Sbjct: 297 SVTGANFSIYNDKVYYYIDSIPIYSAAYGSTEAMIG--INPYASKVL--YVITPSAVFYE 352

Query: 360 FIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
           FIP      ES    +      L+E+K+G  YE+++TN A
Sbjct: 353 FIPIGEKGEESFDTLL------LSELKLGGRYEVVITNYA 386


>gi|403386281|ref|ZP_10928338.1| plant auxin-responsive GH3-like protein [Clostridium sp. JC122]
          Length = 553

 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 102/395 (25%), Positives = 183/395 (46%), Gaps = 41/395 (10%)

Query: 17  FETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQ 76
           FE  T ++      TL+ I+  ++ +++ +        + + +K  VP+ T++D + YI 
Sbjct: 23  FEKNTINSYEKSMSTLKCIIRRSSKSDFGKKHDFISIKNLKEYKEKVPISTYDDYEKYIM 82

Query: 77  RIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIF-----RTSYAFRN 131
           ++  G+   IL    I   + +SGTT GK K +P   + ++   +       R  Y    
Sbjct: 83  KMCRGE-KNILVCDNIKYFALTSGTT-GKQKLIPTTRKGIKVGAKYMGILTERILYENLK 140

Query: 132 REFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQC----CSPD 187
            ++  GKG  L  I  ++   T  G+   +AT+           MK+++S       SP 
Sbjct: 141 EQWNYGKGIMLTDIVNTRY--TISGIPISSATS---------GGMKSIKSIIPFIWTSPI 189

Query: 188 EVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVL 247
           EV+   D   +LY H+L  L   E +  +   F  S++  FRT E  WE L  DI  G L
Sbjct: 190 EVMSMNDKESALYLHILFAL-RDENLSYISGIFISSILDFFRTMEKHWENLVYDIYHGTL 248

Query: 248 SSRITV-PSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSM 306
           +  + + P  R  + +   P  + A  I  +      + G+   ++ +  Y++ +  GS 
Sbjct: 249 NENLKIEPEFRKVLLEKNYPLKKRASEIEGEFK--RGFKGIAKRIWKSIVYIATVTGGSF 306

Query: 307 EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLG 366
             Y  K+ +Y+G+L + S  Y +SE  IG  +NP++     ++ VL +  ++EFIP    
Sbjct: 307 SVYDDKVNYYSGNLIIYSNAYAASEAVIG--MNPNVGK--ISYVVLSDTAFYEFIP---- 358

Query: 367 NLESQVLCIEPKPVGLT--EVKVGEEYEIIVTNVA 399
                + C E   +  T  E+++G+ YEI+VTN +
Sbjct: 359 -----IECSENNIITKTINELEIGKVYEIVVTNFS 388


>gi|390341980|ref|XP_003725566.1| PREDICTED: 4-substituted benzoates-glutamate ligase GH3.12-like
           [Strongylocentrotus purpuratus]
          Length = 639

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 98/383 (25%), Positives = 174/383 (45%), Gaps = 29/383 (7%)

Query: 22  KDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDG 81
           K   + Q E L+ IL+ NA+ EY+++  L   T     K   PL  +E  +PY+ R+   
Sbjct: 99  KKPRKFQEEYLKLILKANAATEYIKDFRLGSVTSLSDLKKMHPLTDYERYRPYVDRLAKC 158

Query: 82  DISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFPIGKGKA 141
           +   +L G  +   + +SGTT GK K +P+     +  L  +     F  R    G    
Sbjct: 159 E-QGVLLGDSVERFALTSGTT-GKSKMIPYGGA-YQKHLNRWLFGIFFDVRVNAFGADGR 215

Query: 142 LQ----FIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQ 197
           LQ         K   ++GG+    A       S      +       +P +     D   
Sbjct: 216 LQREINLYTAPKLRYSEGGILMAPA-------SVITKSFRQFLVMYATPADGFSISDPVD 268

Query: 198 SLYCHLLCGLIFRE-EIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPSI 256
           S+Y HLL GL  R+  ++ V ++F  +L+ A R  E  W +   DI  G +++    P +
Sbjct: 269 SVYVHLLFGL--RDPYLRCVNTSFTSNLMSAMRMVEQRWPDFVRDIELGTVTTTNVPPEV 326

Query: 257 RAAMSKILKP-NPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRH 315
              + + +   +P+ A  + ++    + + G+I  ++P+  ++    +  ++  L  L+ 
Sbjct: 327 HQVLVREMGGGDPKRAAELKREFE--NGFEGIIKRVWPHMTHVHSPDSLGLKDTL--LKS 382

Query: 316 YAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCI 375
           Y   LPL  A  G+SEG  G N+ P+  PE   F ++P +  FEFIP      E ++   
Sbjct: 383 YVKGLPLFGAVLGASEGIFGINLWPT-SPEKDEFVLMPGLCAFEFIP------EDKISED 435

Query: 376 EPKPVGLTEVKVGEEYEIIVTNV 398
           +P+ + + E++VG  YEI++T +
Sbjct: 436 QPETLFIDELQVGGVYEIVITQL 458


>gi|125600828|gb|EAZ40404.1| hypothetical protein OsJ_24855 [Oryza sativa Japonica Group]
          Length = 242

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 60/159 (37%), Positives = 86/159 (54%), Gaps = 11/159 (6%)

Query: 139 GKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQS 198
           GK L F++   ++KT GGL A  A T+VY+S  FK           SP   I   D  QS
Sbjct: 89  GKGLYFLFARSETKTPGGLTAQPALTSVYKSEHFKRAYA-----YTSPMAAILCEDASQS 143

Query: 199 LYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPSIRA 258
           +Y  +LCGL  R ++  V + FA +LV A R  +L W +L  DI  G L+ R+T PS+R 
Sbjct: 144 MYAQMLCGLCQRHDVLRVGAVFAAALVRAIRFLQLNWAQLAADIETGELNPRVTDPSVRE 203

Query: 259 AMSKILKPNPELADLIHKKCS------GLSNWYGLIPEL 291
           A++ IL+P+ ELA+ I  + +       LS  +G  P +
Sbjct: 204 AVAVILRPDAELAEFIRTESAPGATGPALSRAFGQKPSV 242


>gi|405963287|gb|EKC28874.1| GH3 domain-containing protein [Crassostrea gigas]
          Length = 638

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 100/389 (25%), Positives = 176/389 (45%), Gaps = 24/389 (6%)

Query: 16  EFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYI 75
           + +   K+    Q + L   L+ENA  +Y +          E +    PL      +PYI
Sbjct: 91  KLDKCCKNVTETQNKLLLGRLKENAETQYGREYKFLEIQTREEYVKQHPLTYISHYEPYI 150

Query: 76  QRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFND-ELMETTLQIFRTSYAFRNREF 134
           Q+++ G+   +LT +     + +SGT+ GK   LP    +     +Q     Y    + F
Sbjct: 151 QQMMKGE-EKVLTSRQPVIFAVTSGTS-GKSSILPMTKHQGFMFFIQGISVVYHSLLKTF 208

Query: 135 PIGKG--KALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFG 192
           P      K L+F Y  K  K++ G+  G  ++    S T    +  + S   +  E++  
Sbjct: 209 PENNNLQKTLKFFYTPKWRKSECGILIGPNSS----SPTNSKHLLNIYSTPKAGFEILRE 264

Query: 193 PDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRIT 252
           P   ++LY HLL GL   + + ++ + F+  ++ +F      W ++ DDI  G ++ ++ 
Sbjct: 265 P---EALYVHLLFGLA-DKSLGMLEANFSSLILSSFDALYQYWSDIADDIERGEVNLKLN 320

Query: 253 VP-SIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLK 311
           +  S+R  ++  L PNP+ A  I       S   G+   L+P+   +    +GS +   K
Sbjct: 321 IDESVRKELNAALTPNPQRASEIRDVMKTGSK-VGIGKRLWPDCNLILSADSGSFDLPAK 379

Query: 312 KLRH-YAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLES 370
            LR  Y   +P+ S  Y +SEG +G N+ P   P     AV     +FEFIP      + 
Sbjct: 380 ILRETYCEGIPIYSPLYAASEGLLGLNIWPKNHPSRYLLAV--QSMFFEFIPVEHSTED- 436

Query: 371 QVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
                +P  + + +V+ GEEYE+++TN +
Sbjct: 437 -----QPSTLFMDQVEKGEEYELVITNAS 460


>gi|147906344|ref|NP_001082827.1| GH3 domain-containing protein [Danio rerio]
 gi|134026348|gb|AAI35105.1| Ghdcl protein [Danio rerio]
          Length = 463

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 87/306 (28%), Positives = 146/306 (47%), Gaps = 22/306 (7%)

Query: 98  SSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFPIGK--GKALQFIYGSKQSKTKG 155
           +SGT+      L   D   +  LQ          R FP  +   K L+  Y     +++ 
Sbjct: 2   TSGTSGSSRMLLSTKDTNTDFFLQGVTVCLDVMRRAFPATECLQKTLKLFYSPLIRQSEA 61

Query: 156 GLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQL 215
           G+  G        +S+  A  + M     +P  V   P    +LY HLL GL  R  + +
Sbjct: 62  GIPIGP-------NSSTPASSRHMLHLYTTPALVYQVPYERDALYLHLLFGLKDRN-LGM 113

Query: 216 VFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPS-IRAAMSKILKPNPELADLI 274
           + S F  ++ +AFR  E  W +L  D+  G++SS + + + +R A+ K++KP+PE A  +
Sbjct: 114 LESNFCSTIFYAFRALEEHWRDLVMDVEVGMISSALNLEADVRCALEKLMKPDPERAAEL 173

Query: 275 HKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLR-HYAGDLPLMSADYGSSEGW 333
             +      + G+   L+P    +  + +GS + Y + LR HY  D+P  S  Y ++EG 
Sbjct: 174 TAQFE--EGFEGIALRLWPQLHLVLAVDSGSNQIYGEMLRQHYCKDVPFYSPFYAATEGL 231

Query: 334 IGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEI 393
           IG N+ P    E   + + P   + EFIP+   +LES     +PK + + ++K G  YE+
Sbjct: 232 IGVNLWPL--QERRQYLLCPRSMFCEFIPEE--DLESD----QPKTLLMEQLKEGHSYEL 283

Query: 394 IVTNVA 399
           +VTN +
Sbjct: 284 LVTNAS 289


>gi|390353570|ref|XP_003728140.1| PREDICTED: 4-substituted benzoates-glutamate ligase GH3.12-like
           [Strongylocentrotus purpuratus]
          Length = 586

 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 95/389 (24%), Positives = 177/389 (45%), Gaps = 28/389 (7%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           + + +T  K+    Q + L ++L+EN   +Y +   L      E F+    L T+ED +P
Sbjct: 71  LRQLKTAWKNPRYAQDQFLMRVLKENGDTDYGRKFKLKNIVSAEEFRKRHSLTTYEDYKP 130

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDE--LMETTLQIFRTSYAFRN 131
           Y++R++ G+   ++T        ++SGTT G  K+ P  D   L+ + + +  T      
Sbjct: 131 YVERVMAGE-QGVMTQVIPNAFVQTSGTT-GPSKYFPQRDHRYLLTSIMDVLYTHLHELC 188

Query: 132 REFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIF 191
               + + K   ++    Q       N G+      RS+    E   M S   +P     
Sbjct: 189 PRLGMLQKKLFHYV----QPVMSRAKNGGSI-----RSAMSLYEDGFMASCYTTPPSGFR 239

Query: 192 GPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRI 251
              F+++ Y HLL  L+      +   TF   +    +  E  WE++ DDI  G ++ ++
Sbjct: 240 IQSFNEANYIHLLFALL-DPNTGVFCGTFIGGIDTLMKKLEQCWEDIVDDIEHGTITEKV 298

Query: 252 TV--PSIRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEH 308
                 IR+++ + L   +PE A  + ++     N  G++  ++PN + L+ +    +  
Sbjct: 299 KFDDADIRSSLEQALGGGHPERAGELRRQFEKGFN--GIMKRVWPNLEVLAAVDNTGIWP 356

Query: 309 YLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNL 368
            +K    YA  +P +S  YG+SEG I A + P    +  +     N+ +FEFI  RL + 
Sbjct: 357 DVKA--KYAEGIPFVSIGYGNSEGMILA-ICPWFHEDNHSMVFCTNLAFFEFI--RLEDS 411

Query: 369 ESQVLCIEPKPVGLTEVKVGEEYEIIVTN 397
           +      +PK + + E+++G+EYEI+ T 
Sbjct: 412 KES----QPKTLLIDELEIGQEYEIVFTQ 436


>gi|6520208|dbj|BAA87950.1| GH3 homolog [Arabidopsis thaliana]
          Length = 323

 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 51/132 (38%), Positives = 79/132 (59%), Gaps = 2/132 (1%)

Query: 269 ELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRHYAGDLPLMSADYG 328
           ELA+ +   CS   NW G+I +++PN KYL  I+TG+M  Y+  L +Y+G LP+    Y 
Sbjct: 1   ELAEFLVGVCSQ-ENWEGIITKIWPNTKYLDVIVTGAMAQYIPTLEYYSGGLPMACTMYA 59

Query: 329 SSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRL-GNLESQVLCIEPKPVGLTEVKV 387
           SSE + G N+ P   P   ++ ++PN+ YFEF+P    G+  ++    E   V L  V+V
Sbjct: 60  SSESYFGINLKPMCKPSEVSYTIMPNMAYFEFLPHNHDGDGAAEASLDETSLVELANVEV 119

Query: 388 GEEYEIIVTNVA 399
           G+EYE+++T  A
Sbjct: 120 GKEYELVITTYA 131


>gi|390354026|ref|XP_003728244.1| PREDICTED: probable indole-3-acetic acid-amido synthetase
           GH3.8-like [Strongylocentrotus purpuratus]
          Length = 637

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 103/376 (27%), Positives = 164/376 (43%), Gaps = 29/376 (7%)

Query: 28  QRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPIL 87
           QR   R+IL+ N    Y  + GL G       +   PL  +E  +PY++R+++G+ + ++
Sbjct: 102 QRRLWREILDLNGRTAYADDHGLRGMPTLGDLRKQHPLSGYERFRPYVERMLEGEENVLV 161

Query: 88  TGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFPIGK-GKALQFIY 146
            G P + I R++GTT GK K++P  ++  +  L++        N  +P     K L    
Sbjct: 162 DGIPDSYI-RTTGTT-GKSKYIPQKNK-TKMFLKVGSVMGHITNCHYPTSPLAKTLYLYV 218

Query: 147 GSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCG 206
             K   TK G    TA T       F A       Q   P         H++ Y  LL  
Sbjct: 219 APKVLTTKSGSRIETAATMSDGHDWFFA-------QFSVPACGFRIGAMHEAFYVQLLFA 271

Query: 207 LIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITV-PSIRAAMSKILK 265
           L    ++  +   F H L    +  E  W+ L  DI  G + + + + P+IR +++K L+
Sbjct: 272 LK-DPDLGHIIIGFLHFLESGMKLLEKEWKNLTRDIERGTIKADLNLLPAIRESLTKELQ 330

Query: 266 ---PNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGI-MTGSMEHYLKKLRHYAGDLP 321
              P+P  A  +  +      + G+I  + P    L GI  TGS     K    YA  LP
Sbjct: 331 TYGPDPARAAQLRGEFE--KGFEGIIERIRPKVPVLVGIDSTGSWPRLSKT---YAKGLP 385

Query: 322 LMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVG 381
           L+S+ YG SE  IG N  P    +   +  L     FEFI       E ++   +P+   
Sbjct: 386 LLSSFYGCSESMIGVNPGPKFIDK-KGYLPLAKWSVFEFIK------EEEMSSSQPRTFF 438

Query: 382 LTEVKVGEEYEIIVTN 397
           L E+  G+ YE+++T 
Sbjct: 439 LNELDQGQNYEVVITQ 454


>gi|443311428|ref|ZP_21041056.1| GH3 auxin-responsive promoter-binding protein [Synechocystis sp.
           PCC 7509]
 gi|442778466|gb|ELR88731.1| GH3 auxin-responsive promoter-binding protein [Synechocystis sp.
           PCC 7509]
          Length = 557

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 104/397 (26%), Positives = 178/397 (44%), Gaps = 44/397 (11%)

Query: 17  FETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQ 76
           F   T+    +Q + L  +L    + E      +      + F+S +P++ +   + YI+
Sbjct: 20  FSQKTRRTSAVQEQFLLSLLSAYQNTELGNAYKIGEIKTIDQFRSRIPVLPYSSYESYIE 79

Query: 77  RIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAF------- 129
           RI + +   ILT  P+  ++ +SG+T  K K +P       +  Q   TS  F       
Sbjct: 80  RIANSE-QNILTNDPVVYLNLTSGST-SKQKLIPVTKRFQNSLRQANLTSIGFLHEALKS 137

Query: 130 RNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEV 189
           + R+F    GK L          T GG++ GTA+  V R   F  E          P E 
Sbjct: 138 QGRKF----GKLLATNSVQLVGTTSGGIDYGTASVGVLRMGKFVYEQL-----FSHPYET 188

Query: 190 IFGPDFHQSLYCHLLCGLIF---REEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGV 246
           +   D   SL  H LC L+F      ++ + + F   ++      E+  E+L  D+  G 
Sbjct: 189 LQPVD---SLARHYLC-LLFALGNPNLRGIGANFPMLVLRICNYLEIYTEDLIKDLETGT 244

Query: 247 LSSRITV-PSIRAAMSKILKPNPELADLIHK--KCSGLSNWYGLIPEL-FPNAKYLSGIM 302
           ++  +++ P +RA + + +  NP  A  + +  K +G+     L P+L +P+  +++   
Sbjct: 245 IALWLSLEPKVRALLEQQMLANPRRAKQLREIYKSNGI-----LTPKLAWPDLSFVATAR 299

Query: 303 TGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIP 362
            G+ + Y ++   Y GD P   A Y S+EG    ++N  L  + +  A+    G+FEFIP
Sbjct: 300 GGTSDFYFERFTTYFGDTPGFGAVYSSAEGTF--SINHDLNTDGSILAI--ESGFFEFIP 355

Query: 363 QRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
           Q     E       P+ +  TEVK+GE Y I+VTN +
Sbjct: 356 QDQWETE------HPQTLLATEVKLGEFYRILVTNYS 386


>gi|15221936|ref|NP_175301.1| Auxin-responsive GH3 family protein [Arabidopsis thaliana]
 gi|12597807|gb|AAG60118.1|AC073555_2 auxin-regulated protein, putative [Arabidopsis thaliana]
 gi|38566604|gb|AAR24192.1| At1g48690 [Arabidopsis thaliana]
 gi|40824047|gb|AAR92331.1| At1g48690 [Arabidopsis thaliana]
 gi|332194216|gb|AEE32337.1| Auxin-responsive GH3 family protein [Arabidopsis thaliana]
          Length = 190

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 66/189 (34%), Positives = 106/189 (56%), Gaps = 7/189 (3%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           +++ E +T + +++Q + L +IL+ NA+ EYL    L+  +  E FK  VP+V+++D++P
Sbjct: 7   LKDLEELTSNVKQVQDDLLEEILQINANTEYLCQF-LHRSSSKELFKKNVPVVSYDDVRP 65

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNRE 133
           YI+R+ +G+ S I TG+ IT    SSGT+ GK K  P N++  E  + I     +  ++ 
Sbjct: 66  YIERVANGEPSNIFTGETITNFFLSSGTSGGKQKIFPVNNKYFENMIFIHALCSSTISKY 125

Query: 134 FP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQC-CSPDEVIF 191
              IG+GK + F+     SKT  GL     +T+   S  FK       S+C  SPDEVI 
Sbjct: 126 IDGIGEGKVMAFLNTRPFSKTPSGLPVAPLSTSFAMSDYFKNR----PSKCYISPDEVIL 181

Query: 192 GPDFHQSLY 200
             D  Q++Y
Sbjct: 182 CVDNRQNMY 190


>gi|390331835|ref|XP_003723363.1| PREDICTED: probable indole-3-acetic acid-amido synthetase
           GH3.5-like [Strongylocentrotus purpuratus]
          Length = 650

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 101/392 (25%), Positives = 178/392 (45%), Gaps = 30/392 (7%)

Query: 15  EEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPY 74
            + E+ TK  +  Q + LR +LE+ A   Y ++           F+   PL  H   +PY
Sbjct: 91  RKLESQTKRCQEEQEQFLRSLLEKQAGTAYGKDKQFASLKTSAQFRQQHPLTFHCHYEPY 150

Query: 75  IQRIIDG-DISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNRE 133
           +++I++G D + ++ GKP+  +  +SGTT  +   +     L+   L+          R 
Sbjct: 151 LKQIVEGGDDNVLIEGKPLR-LGLTSGTTGQRKMIVTSKRRLLLFILKFVPIGQRILRRS 209

Query: 134 FPIGKGKALQ--FIYGSKQ-SKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVI 190
                   L+  ++Y   Q S    G++ G  T        ++        Q  +P   +
Sbjct: 210 ILPSFSPLLKTCYLYAHTQPSYPLPGISMGPTTMLNLPDLLYRL-------QYSTPPAGM 262

Query: 191 FGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSR 250
              +  Q+ Y HLL  L  R+ +Q +F+ FA SL + F+  E  W  L +D+REG +S  
Sbjct: 263 RLTNEKQATYVHLLFALRDRD-LQAIFAIFAASLYYTFKILEEEWPGLVNDLREGRISDS 321

Query: 251 ITVP-SIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHY 309
           I +   ++  + K L+ +P+ A+ +  +      +  +   ++P    L G+ +GSM  Y
Sbjct: 322 INLAHDVKITLEKELQADPKRANELEAEFK--KGFDDIARRIWPRMSSLWGVTSGSMTVY 379

Query: 310 LKKLR-HYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNL 368
              L+  Y  DLP++S  Y S+E  +G     +   E  TF   P   ++EFIP      
Sbjct: 380 EDILKVKYIKDLPVVSMIYNSTECLLGVLHGGAKRTEYITF---PADVFYEFIP-----F 431

Query: 369 ESQVLCIEPKPVGLT--EVKVGEEYEIIVTNV 398
           E+   C + +P  L   EV VG  YE+++T++
Sbjct: 432 EN---CSQDQPDTLLAEEVTVGSYYEVVITSI 460


>gi|390358979|ref|XP_795021.3| PREDICTED: probable indole-3-acetic acid-amido synthetase
           GH3.8-like [Strongylocentrotus purpuratus]
          Length = 511

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 94/391 (24%), Positives = 168/391 (42%), Gaps = 27/391 (6%)

Query: 15  EEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPY 74
           E+ +  T++ + +Q E L   L+  +   Y +         P+ +    PL       P+
Sbjct: 63  EKLDKDTRNCQEVQTEILMSRLQSASETLYGKQFNFADIKSPQDYCQKHPLTRANHYHPF 122

Query: 75  IQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPF-NDELMETTLQIFRTSYAFRNRE 133
           +Q I  G    +    PI  ++ +SGT+ G    +P      M   L           + 
Sbjct: 123 VQEIASGTHHVLTKDDPII-LAVTSGTS-GHHNLVPMIKAASMYFLLNGVTVCLDSIRKA 180

Query: 134 FPIGKG--KALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIF 191
            P  +   + L+  Y  K   + GG+  G  +     S  F            +P     
Sbjct: 181 IPETQHLRRTLKIFYNPKSRTSPGGVPIGPNSATPKSSKDFI-------DMYSTPMAAFD 233

Query: 192 GPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRI 251
                ++LY HLL  LI   EI  + + F   + +AF   E  WE+L  DI  G +S ++
Sbjct: 234 ITTEREALYAHLLFALI-DSEIGAIEANFVPLIHNAFVELEENWEQLVQDIARGEVSPQL 292

Query: 252 TVP-SIRAAMSKILKPNPELADLIHKKCS-GLSNWYGLIPELFPNAKYLSGIMTGSMEHY 309
            +P  +R  ++ +L P+PE A+ + K+   G  N   +   ++PN + +  + +G+ + Y
Sbjct: 293 NIPEDVRQKLNDLLSPDPERAEDLRKEFERGFDN---IAKRIWPNVQVILSVDSGAFQVY 349

Query: 310 LKKLRH-YAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNL 368
              LR  Y  D+P+ S  Y +SEG IG N+ P        + ++P   + EFIP    + 
Sbjct: 350 GNMLREKYTKDIPIYSCLYAASEGLIGINIWPFDAER--RYLLVPKSMFCEFIPVEKSDE 407

Query: 369 ESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
           E      +P  + + +V+ G  YE+++TN++
Sbjct: 408 E------QPSTLLMEQVEKGATYELVLTNMS 432


>gi|197306346|gb|ACH59524.1| GH3 auxin-responsive promotor family protein [Pseudotsuga
           menziesii]
 gi|197306348|gb|ACH59525.1| GH3 auxin-responsive promotor family protein [Pseudotsuga
           menziesii]
 gi|197306350|gb|ACH59526.1| GH3 auxin-responsive promotor family protein [Pseudotsuga
           menziesii]
 gi|197306352|gb|ACH59527.1| GH3 auxin-responsive promotor family protein [Pseudotsuga
           menziesii]
 gi|197306354|gb|ACH59528.1| GH3 auxin-responsive promotor family protein [Pseudotsuga
           menziesii]
 gi|197306356|gb|ACH59529.1| GH3 auxin-responsive promotor family protein [Pseudotsuga
           menziesii]
 gi|197306358|gb|ACH59530.1| GH3 auxin-responsive promotor family protein [Pseudotsuga
           menziesii]
 gi|197306360|gb|ACH59531.1| GH3 auxin-responsive promotor family protein [Pseudotsuga
           menziesii]
 gi|197306362|gb|ACH59532.1| GH3 auxin-responsive promotor family protein [Pseudotsuga
           menziesii]
 gi|197306364|gb|ACH59533.1| GH3 auxin-responsive promotor family protein [Pseudotsuga
           menziesii]
 gi|197306366|gb|ACH59534.1| GH3 auxin-responsive promotor family protein [Pseudotsuga
           menziesii]
 gi|197306368|gb|ACH59535.1| GH3 auxin-responsive promotor family protein [Pseudotsuga
           menziesii]
 gi|197306370|gb|ACH59536.1| GH3 auxin-responsive promotor family protein [Pseudotsuga
           menziesii]
 gi|197306372|gb|ACH59537.1| GH3 auxin-responsive promotor family protein [Pseudotsuga
           menziesii]
 gi|197306374|gb|ACH59538.1| GH3 auxin-responsive promotor family protein [Pseudotsuga
           menziesii]
 gi|197306376|gb|ACH59539.1| GH3 auxin-responsive promotor family protein [Pseudotsuga
           menziesii]
 gi|197306378|gb|ACH59540.1| GH3 auxin-responsive promotor family protein [Pseudotsuga
           menziesii]
 gi|197306380|gb|ACH59541.1| GH3 auxin-responsive promotor family protein [Pseudotsuga
           menziesii]
 gi|197306382|gb|ACH59542.1| GH3 auxin-responsive promotor family protein [Pseudotsuga
           menziesii]
 gi|197306384|gb|ACH59543.1| GH3 auxin-responsive promotor family protein [Pseudotsuga
           menziesii]
 gi|197306386|gb|ACH59544.1| GH3 auxin-responsive promotor family protein [Pseudotsuga
           menziesii]
 gi|197306388|gb|ACH59545.1| GH3 auxin-responsive promotor family protein [Pseudotsuga
           menziesii]
 gi|197306390|gb|ACH59546.1| GH3 auxin-responsive promotor family protein [Pseudotsuga
           menziesii]
 gi|197306392|gb|ACH59547.1| GH3 auxin-responsive promotor family protein [Pseudotsuga
           macrocarpa]
          Length = 65

 Score =  100 bits (249), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/65 (56%), Positives = 57/65 (87%)

Query: 281 LSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNP 340
           + NWYG+IP+++PNAKY+  IMTG+ME YL+KLRHYAG+LPL++++YG++E W+ +N++P
Sbjct: 1   IGNWYGVIPQIWPNAKYIISIMTGAMEPYLRKLRHYAGNLPLLNSEYGATESWVASNIDP 60

Query: 341 SLPPE 345
           +  PE
Sbjct: 61  TSSPE 65


>gi|296081237|emb|CBI17981.3| unnamed protein product [Vitis vinifera]
          Length = 490

 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 47/101 (46%), Positives = 70/101 (69%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           +E  E +T +A+ +Q + L +I+  N++ EYLQ  GLNGR D ++FK  VP+VT+ED+ P
Sbjct: 29  LEFIEDVTMNAKEVQMQVLSEIITRNSNVEYLQRHGLNGRVDADTFKKIVPVVTYEDMLP 88

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDE 114
            I+RI +GD+SPIL  KPI+    SSGT+ G+ K +P  +E
Sbjct: 89  DIERIANGDMSPILCSKPISEFLTSSGTSGGERKLMPTIEE 129



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 43/109 (39%), Positives = 65/109 (59%), Gaps = 6/109 (5%)

Query: 291 LFPNAKYLSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFA 350
           L+PN KY+  I+TG+M  Y+  L +Y+  LPL+   Y SSE + G N+NP   P   ++ 
Sbjct: 195 LWPNTKYIDVIVTGTMSQYIPTLDYYSNGLPLVCTMYASSECYFGLNLNPLCKPSEVSYT 254

Query: 351 VLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
           ++P + YFEF+P    N  +  L      V L +VK+G+EYE++VT  A
Sbjct: 255 LIPTMAYFEFLPVNRKNGFTNEL------VDLVDVKLGQEYELVVTTYA 297


>gi|427739253|ref|YP_007058797.1| GH3 auxin-responsive promoter-binding protein [Rivularia sp. PCC
           7116]
 gi|427374294|gb|AFY58250.1| GH3 auxin-responsive promoter-binding protein [Rivularia sp. PCC
           7116]
          Length = 565

 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 99/386 (25%), Positives = 169/386 (43%), Gaps = 30/386 (7%)

Query: 21  TKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIID 80
           T+ A   Q + L  +L+ +   E+ ++         E FK  +P++T+   + Y++RI  
Sbjct: 24  TRKAAICQEKFLFSLLKTHQQTEFGKDYSFKDIKTIEQFKQKIPILTYSGYEKYVERIAK 83

Query: 81  GDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFR-----NREFP 135
           G+   ILT  P+   ++SSG+T GK K +P    + +   ++ + S  F       R  P
Sbjct: 84  GE-QNILTSDPVVYFNQSSGST-GKQKLIPVTKRVRKVRSRVTQQSLGFMTDAAIKRGLP 141

Query: 136 IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDF 195
           IGK      I    + +T GG+  GT++    R+  F       +     P + +   D 
Sbjct: 142 IGKMLLTTSI--QIRDRTSGGIAYGTSSVGDLRNMDF-----LYRQVFVHPYDALKPADS 194

Query: 196 HQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITV-P 254
               Y  LL  L    +++++ + F    +      +    +L  DI  G ++S + + P
Sbjct: 195 LARNYVCLLFALR-NPQMRVIGANFPILALQLADYLQRYAADLIKDIETGKIASWLNLEP 253

Query: 255 SIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPEL-FPNAKYLSGIMTGSMEHYLKKL 313
            IR A+ K L   P+ A  +    S L +   L P++ + N  ++     G+   Y +K 
Sbjct: 254 EIRQALEKQLSAAPQRAAEL---GSILESEGTLTPKMAWQNLSWIITARGGTSNFYFEKF 310

Query: 314 RHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVL 373
             Y GD P+    Y +SE   G  +      +    A+  + G+FEFIP      E    
Sbjct: 311 HKYFGDTPIFGGIYAASEATFG--IYEDFNSDGTILAI--DSGFFEFIPSDEWEKE---- 362

Query: 374 CIEPKPVGLTEVKVGEEYEIIVTNVA 399
             +PK V   EV+VGE Y I+VTN +
Sbjct: 363 --QPKTVLAHEVEVGEYYRIVVTNYS 386


>gi|296121218|ref|YP_003628996.1| GH3 auxin-responsive promoter [Planctomyces limnophilus DSM 3776]
 gi|296013558|gb|ADG66797.1| GH3 auxin-responsive promoter [Planctomyces limnophilus DSM 3776]
          Length = 586

 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 95/397 (23%), Positives = 179/397 (45%), Gaps = 29/397 (7%)

Query: 10  VDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHE 69
           +  + +E+ +  +   R QRETL +IL  NA++E+ +  GL     P+ ++  +P+   E
Sbjct: 17  LSHVADEYLSRCEQCYRTQRETLSRILALNATSEFSRKHGLKASLSPDDYRLQIPVSDFE 76

Query: 70  DLQPYIQRIIDGDISPIL-TGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRT-SY 127
            ++PYI+++  G  S +L    P+   + SSGTT  + K++P     ++   + +     
Sbjct: 77  LVRPYIEQVQRGATSALLGANNPLLMFALSSGTT-AESKYIPITKPFLDDYRRGWNIWGL 135

Query: 128 AFRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPD 187
            F N      +   +Q     +Q  T GG   G  +  V        + + ++S    P 
Sbjct: 136 RFFNDHEKANRLDIVQLTSDYEQFHTSGGTPCGNISGLV-----TSMQSRIVRSMYTIPP 190

Query: 188 EVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVL 247
           EV    D     Y  L C +   E + L+ +    +L+   +      E L  DI +G +
Sbjct: 191 EVAKVRDTEAKSYISLRCAMA-NEHVGLITTANPSTLIRWAQLANEHKETLIRDIHDGTI 249

Query: 248 SSRITVPS-IRAAMSK-ILKPNPELADLIHKKCSGLSNWYGLIP-ELFPNAKYLSGIMTG 304
               ++P+  R   +K   +PN   A  +            L P + +P+ + L+    G
Sbjct: 250 HYAQSIPAEFRTTFTKGHFRPNKSRALWLENLVQQTGQ---LTPGDFWPHLQALAVWTGG 306

Query: 305 SMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIG--YFEFIP 362
           +++HYL  +R   G++P+      +SEG +      ++P E  T + + +IG  YFEFIP
Sbjct: 307 AVKHYLPSMRKLYGNVPVRDHGLSASEGRM------TIPLEDETSSGVLDIGTHYFEFIP 360

Query: 363 QRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
                 E++     P  +G  E+++G++Y I++T  +
Sbjct: 361 ------EAEYGRSNPVVLGAHELELGQDYYILLTTTS 391


>gi|434395160|ref|YP_007130107.1| GH3 auxin-responsive promoter [Gloeocapsa sp. PCC 7428]
 gi|428267001|gb|AFZ32947.1| GH3 auxin-responsive promoter [Gloeocapsa sp. PCC 7428]
          Length = 560

 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 104/390 (26%), Positives = 173/390 (44%), Gaps = 30/390 (7%)

Query: 17  FETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQ 76
           F   T +A  +Q + L  +L+ + + E  +   LN  T  E F+  +P+  +   +PYIQ
Sbjct: 20  FVKKTHNALSLQEQFLINLLDFHKNTELGKEYSLNDITTIEQFQQRIPIWEYSSYEPYIQ 79

Query: 77  RIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRN---RE 133
           R+  G+ + ILT  P+   + +SG+T GK K +P       T  +   TS  F +   R 
Sbjct: 80  RMAQGEKN-ILTPDPVVYFNTTSGST-GKQKLIPVTQYFQSTLRRANFTSIGFLDTALRS 137

Query: 134 FPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGP 193
             +  GK L         +T  G+  G   T V R +      K +  Q  +    +   
Sbjct: 138 RNLNFGKLLVTNTAKITGQTASGIAYGPGGTGVIRMN------KILYQQLFAHPYTLL-- 189

Query: 194 DFHQSLYCHLLCGLI-FREE-IQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRI 251
           +   S+  H LC L   R+E ++ + + F   ++   +  E   ++L  D+  G ++S +
Sbjct: 190 EVSDSVSRHYLCLLFALRDESMRGMIANFPMLILRTCQYLERYAKDLIHDLEFGQIASWL 249

Query: 252 TV-PSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPEL-FPNAKYLSGIMTGSMEHY 309
            + P IR  + K     P  A  +    S L N   L P+L + N  +++    G+   Y
Sbjct: 250 NLEPEIRKTLEKQFFAVPSRAAQLK---SILRNNGKLTPKLAWSNLSFIATARGGTSNFY 306

Query: 310 LKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLE 369
             +   Y  D P+  A Y S+EG    ++   L  + +  A+    G+FEFIPQ      
Sbjct: 307 FHRFPDYLEDTPIFGAVYASAEGTF--SIYSDLNTDGSILAI--ESGFFEFIPQ------ 356

Query: 370 SQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
            Q     PK +  TEVKVG+ Y I++TN +
Sbjct: 357 DQWEEAHPKTLLATEVKVGQLYRILMTNYS 386


>gi|390365269|ref|XP_003730783.1| PREDICTED: 4-substituted benzoates-glutamate ligase GH3.12-like
           [Strongylocentrotus purpuratus]
          Length = 440

 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 97/383 (25%), Positives = 179/383 (46%), Gaps = 32/383 (8%)

Query: 22  KDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDG 81
           K   + Q + L+KI++EN   EY +   L      + F+   PL T+E  + Y+ R++DG
Sbjct: 50  KTPRKFQEKLLQKIIKENGDTEYGKRFNLRDIHSLDEFRRAHPLTTYEHYRSYVDRMMDG 109

Query: 82  DISPILTGKPITTISRSSGTTQGKPKFLPFNDEL--METTLQIFRTSYAFRNREFPIGKG 139
           + + +LT +  T+ +R++GTT GK K +P+ ++L   ET   +  +  + R     +G  
Sbjct: 110 EKN-VLTRQTPTSYARTTGTT-GKSKHIPYVNKLAIFETLGAV--SDISLRENAPSLGLF 165

Query: 140 KALQFIYGSKQ-SKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQS 198
           +   ++Y     SKT  G    T        +T  A          +P   +     +++
Sbjct: 166 QRRLYLYVQPHVSKTTSGARVETI-------ATLPAIPDVFLGLFTTPGPGLRLQTIYEA 218

Query: 199 LYCHLLCGLIFRE--EIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVP-S 255
            Y HLL GL+ R+   IQ+ F TF  +L+   +     W E+  DI  G +++ +++P  
Sbjct: 219 NYIHLLFGLLERDLGVIQMTFLTFLENLMEQLKN---CWREILFDIENGTINANLSLPGD 275

Query: 256 IRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLR 314
           IR ++   L   +P  A  + ++      + G++  ++P  + +  I   ++  + K   
Sbjct: 276 IRKSLLIALGNGDPGRAKELKEEFK--RGFSGILKRIWPRLQVVIAIDRTNI--WPKIES 331

Query: 315 HYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLC 374
            +A  + +MS  Y  SEG+ G  + P+   ++A +   P     EFI       E  +  
Sbjct: 332 KFARGVKIMSGGYACSEGFFGVCLGPARMNQVA-YLPFPTDTVAEFIR------EDDIGQ 384

Query: 375 IEPKPVGLTEVKVGEEYEIIVTN 397
            +PK   L EV+ GE YE+++T 
Sbjct: 385 SQPKTYFLDEVEEGECYEVVLTQ 407


>gi|440804607|gb|ELR25484.1| plant auxinresponsive GH3-like protein [Acanthamoeba castellanii
           str. Neff]
          Length = 699

 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 90/355 (25%), Positives = 165/355 (46%), Gaps = 58/355 (16%)

Query: 57  ESFKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELM 116
           E+FK  VPL T+ DL P++ ++  G+ + +LT + I  +  +SGT+  K K LP      
Sbjct: 173 EAFKVAVPLATYYDLAPWVAQVAGGEQN-VLTSESIIQLGVTSGTSYSK-KQLPVT---- 226

Query: 117 ETTLQIFRTSYAFRN---------REFPIGKG--KALQFIYGSKQSKTKGGLNAGTATTN 165
               Q  +T++ F+            FP  +G  K+L+ ++    S + GG+  G  ++ 
Sbjct: 227 ----QRQKTNFFFKGIAPLFDVLFTHFPQARGLQKSLKIMFQPTYSTSPGGIKVGANSSA 282

Query: 166 VYRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLV 225
              S T    +  M +      E++  PD    LY HLL  L   E +  + + F   + 
Sbjct: 283 PSDSPT----LLNMYTTPPVAYEIMSEPDL---LYVHLLFALK-DEYLGSLEANFVMLIH 334

Query: 226 HAFRTFELVWEELCDDIREGVLSSRITVPS-IRAAMSKILK-PNPELADLIHKKCSGLSN 283
           H F   E  W +  +DI  G +S+++ +P  +R  +   +  P+   A ++ ++      
Sbjct: 335 HLFVRMEKQWRQAVEDIERGRVSAKVQMPDHVRRQLEDYMAGPDVSRARMLTREFEA--- 391

Query: 284 WYGLIPELFPNAKYLSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLP 343
                           GI   S   Y ++ R+Y GD+P+ S  Y ++EG +G N++    
Sbjct: 392 -------------GFEGIAR-SFSLYAERARYYLGDVPIYSPLYAATEGLLGVNLD---- 433

Query: 344 PELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV 398
           P+ + + ++P+  + EFIP  L + + +    +P  +G+ EV+ G+ YE+ VT  
Sbjct: 434 PKGSAYYLVPSNMFIEFIP--LDHCDQE----QPPTLGMDEVEAGQSYELAVTTA 482


>gi|301626363|ref|XP_002942362.1| PREDICTED: GH3 domain-containing protein-like [Xenopus (Silurana)
           tropicalis]
          Length = 592

 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 100/391 (25%), Positives = 162/391 (41%), Gaps = 36/391 (9%)

Query: 15  EEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPY 74
            + E  T DAERIQ + L  IL      +Y Q       TD  SF+   PL  + D +  
Sbjct: 53  HKLEKDTADAERIQEKVLLGILGGLKETDYGQKHHFRDLTDVSSFRKLHPLTGYHDYKDC 112

Query: 75  IQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFN-DELMETTLQIFRTSYAFRNRE 133
           IQ+I++G  + ++ GKPI  +  ++  T G P+ +P       E   Q    S    +  
Sbjct: 113 IQQILEGAENILVPGKPIALV--ATAGTSGAPRTVPVTAHSAAERFQQGAMVSLEVIHST 170

Query: 134 FPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGP 193
           FP    K  +F        +K G+  G      Y S     E          P    +G 
Sbjct: 171 FPGALEKVARFSVPPSICHSKSGIPIGP-----YPSVASYTEQLYTPDVPSDPKMAAYGL 225

Query: 194 DFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITV 253
            + Q L+     GL   E      ++FA  L+  F   E  WE L  DI +G +S  + +
Sbjct: 226 LYIQLLFALKEPGLTSLE------TSFAWLLLRVFSILETQWETLVKDIMQGRISPDLEL 279

Query: 254 P-SIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKK 312
           P  +R  +   L   P  A  +H +C     + G+   ++P  +    + +G  E   + 
Sbjct: 280 PQDVRKQIEDNLLAEPRRARELHAQCE--KGFLGIAKRIWPRLQVAITVCSGGSELDWQL 337

Query: 313 LRHYAGDLP-----LMSADYGSSEGWIGANVNP-SLPPELATFAVLPNIGYFEFIPQRLG 366
           LR    D+P     L S  Y ++EG  G N++P ++ P    + + P   +FEFI   +G
Sbjct: 338 LR----DVPCQGVTLYSPLYCAAEGLFGVNISPTAVAPR---YVLCPRSAFFEFIAVGVG 390

Query: 367 NLESQVLCIEPKPVGLTEVKVGEEYEIIVTN 397
              S+      + + L +V   + YE+++T 
Sbjct: 391 AEGSE------ETICLQDVCAEKAYELVITT 415


>gi|390353573|ref|XP_003728141.1| PREDICTED: 4-substituted benzoates-glutamate ligase GH3.12-like
           [Strongylocentrotus purpuratus]
          Length = 630

 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 93/388 (23%), Positives = 170/388 (43%), Gaps = 28/388 (7%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           + + +T  K+    Q + L ++L+EN   +Y +   L      E F+    L T+ED +P
Sbjct: 71  LRKLKTAWKNPRYAQDQFLMRVLKENGDTDYGRKFKLKNIVSAEEFRKRHSLTTYEDYKP 130

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDE--LMETTLQIFRTSYAFRN 131
           Y++R++ G+   ++T        ++SGTT G  K+ P  D+  L+   + +  T+     
Sbjct: 131 YVERVMAGE-QCVMTQVMPNAFVQTSGTT-GPSKYFPQRDQRYLLTRMMDVLYTNLHELC 188

Query: 132 REFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIF 191
               + + K   ++         GG           RS+    E   M S   +P     
Sbjct: 189 PRLGLLQKKLFHYVQPVMSRAKNGG---------SIRSAFALYEDGFMASCYTTPPSGFR 239

Query: 192 GPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRI 251
              +  + Y HL+  L+      L   +F   +    +  E  WE++  DI  G ++ ++
Sbjct: 240 IHSYDDANYIHLVFTLLDPNTGALC-GSFLGGIYTMMKQLEQCWEDIVYDIEHGTITEKV 298

Query: 252 TV--PSIRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEH 308
                 IR+++ + L   +PE A  + ++     N  G++  ++PN + LS +       
Sbjct: 299 KFDDADIRSSLEQALGGGHPERAGELRRQFEKGFN--GIMKRVWPNLEVLSAVDNAGSWP 356

Query: 309 YLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNL 368
            LK    YA  +P ++  YG+SE  I   V+P    +  +     N+ +FEFI     N 
Sbjct: 357 DLKA--KYAEGIPFVNLGYGNSEAMI-LGVSPWFHEDNHSMVFCTNMAFFEFIRHEDSN- 412

Query: 369 ESQVLCIEPKPVGLTEVKVGEEYEIIVT 396
           ESQ     PK + + E+++G+EYEI+ T
Sbjct: 413 ESQ-----PKTLLIDELEIGQEYEIVFT 435


>gi|254415094|ref|ZP_05028857.1| GH3 auxin-responsive promoter superfamily [Coleofasciculus
           chthonoplastes PCC 7420]
 gi|196178241|gb|EDX73242.1| GH3 auxin-responsive promoter superfamily [Coleofasciculus
           chthonoplastes PCC 7420]
          Length = 563

 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 104/397 (26%), Positives = 175/397 (44%), Gaps = 44/397 (11%)

Query: 17  FETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQ 76
           F   T   E +Q   L  +L    + E  +  GL      + F+  VP++ +   +PY +
Sbjct: 20  FVNKTHQTEAVQERFLLTLLRRYQNTELGRKWGLREIRTIDQFRDRVPVLPYSSYEPYTE 79

Query: 77  RIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAF------- 129
           RI  G+ S ILT  P+  ++ +SG+T G  K +P       +      TS  F       
Sbjct: 80  RIFQGE-SNILTPDPVVYLNLTSGST-GSKKLIPVTKRFQNSLRGANLTSMGFLVDALKT 137

Query: 130 RNREFPIGKGKALQFIYGSKQ--SKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPD 187
           R R+F    GK L  I  S Q   +T GG+  G A+  + R   F       Q     P 
Sbjct: 138 RQRQF----GKLL--ITNSVQLLGRTPGGVKYGPASVGILRMGKF-----LYQQLFAHPF 186

Query: 188 EVIFGPDFHQSLYCHLLCGLI-FREE-IQLVFSTFAHSLVHAFRTFELVWEELCDDIREG 245
           E +  P    SL  H +C L   R+  ++ + + F   L+      E   E+L  D+ +G
Sbjct: 187 ETL-QPG--NSLARHYVCLLFALRDRTMRGMIANFPMLLLRTASYLETYAEDLIRDLDKG 243

Query: 246 VLSSRITVPS-IRAAMSKILKPNPELADLIHKKCSGLSNWYG-LIPE-LFPNAKYLSGIM 302
            +++ + + S IR+ +       PE A    ++   + N  G L P+ ++ +  +++   
Sbjct: 244 TIANWLDLESGIRSQLEHQWSAYPERA----RELRDILNQEGRLTPKRVWSDLSFVATAR 299

Query: 303 TGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIP 362
            G+ + Y ++   Y  D P+  A Y S+E     ++ P +  + +  A+    G+FEF+P
Sbjct: 300 GGTSDFYFQRFPDYFEDTPVFGAVYSSAEATF--SIYPDVDTDGSVLAI--ESGFFEFVP 355

Query: 363 QRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
           Q   + E       PK +  TEVKVGE Y ++ TN +
Sbjct: 356 QDQWDAE------HPKTLLATEVKVGEHYRLLTTNYS 386


>gi|317419440|emb|CBN81477.1| GH3 domain-containing protein [Dicentrarchus labrax]
          Length = 464

 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 80/306 (26%), Positives = 139/306 (45%), Gaps = 22/306 (7%)

Query: 98  SSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFPIGKG--KALQFIYGSKQSKTKG 155
           +SGT+      L   D   E  LQ          R FP      +  +F Y     +++ 
Sbjct: 2   TSGTSGASAMLLSTQDTNTEFFLQGVTVCLDAMRRAFPATDSLQRTTKFFYTPTFRQSEA 61

Query: 156 GLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQL 215
           G+  G        +S+  A  + M +   +P      P    +LY HLL  L     +  
Sbjct: 62  GIPIGP-------NSSTPASSRHMLNLYTTPAPAFEVPSEKDTLYLHLLFALK-DPSVGT 113

Query: 216 VFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITV-PSIRAAMSKILKPNPELADLI 274
           + S FA ++ +AF   +  W+EL +DI  G +SS + + P +R  +  ++KP+PE A  +
Sbjct: 114 LESNFASTVYYAFSALQDRWQELVEDIERGKVSSALALEPKVRLRLEALMKPDPERAAQL 173

Query: 275 HKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLR-HYAGDLPLMSADYGSSEGW 333
             +      + G+   L+P+   +  + +GS + Y + LR +Y   +P  S  Y ++EG 
Sbjct: 174 --RVHFQDGFRGIAKRLWPHLHLVLAVDSGSNQIYGEMLRGNYCQGVPFYSPFYAATEGL 231

Query: 334 IGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEI 393
           IG N+ P  P     + + P   + EF+P+    LE +     P  + + EVK G+ YE+
Sbjct: 232 IGVNLWPQEPNR--RYMLCPRSMFCEFLPE--SRLEEET----PHTLLMEEVKEGQNYEL 283

Query: 394 IVTNVA 399
           ++TN +
Sbjct: 284 VITNAS 289


>gi|428778368|ref|YP_007170155.1| GH3 auxin-responsive promoter [Halothece sp. PCC 7418]
 gi|428692647|gb|AFZ45941.1| GH3 auxin-responsive promoter [Halothece sp. PCC 7418]
          Length = 570

 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 93/393 (23%), Positives = 181/393 (46%), Gaps = 34/393 (8%)

Query: 16  EFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYI 75
           +F+  TK   + Q + L+ +L  + +  + Q   L+     + F+S + +  +++ +PYI
Sbjct: 19  QFQQQTKAVIKTQEKFLQAVLTRHQNTLFGQEEKLSQIKSIDEFRSRMRVRNYDEYEPYI 78

Query: 76  QRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP 135
           Q++  G+   ILT       + +SG+T GK K +P   +   +       S  F +    
Sbjct: 79  QQMAAGE-ENILTRDRAVYFNTTSGST-GKQKLIPVTKKFQNSLGWANLISIGFLSTALK 136

Query: 136 IGKGKALQFIYGSKQSK----TKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIF 191
             +G  L+ +  +  +     T GG+  G+ +  V +   +       Q    +P E + 
Sbjct: 137 -KRGTHLRKLLLTNSTNISGYTSGGIPYGSGSAGVLKMGKW-----VYQQLFANPYETLQ 190

Query: 192 GPDFHQSLYCHLLCGLIFRE--EIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSS 249
             D   S   H LC L   +  E   + + F   ++   +  E   ++L D+++ G + +
Sbjct: 191 VSD---SFARHYLCLLFALQNPETGGIVANFPMLILRTCQYLEQYSDDLIDNLKTGTIPN 247

Query: 250 RITVPS-IRAAMSKILKPNPELADLIHKKCSGLSNWYGLI--PELFPNAKYLSGIMTGSM 306
            +T+ S +R  + K L+P P+ A    ++   +    G +  P+++ N  Y++    G+ 
Sbjct: 248 WLTLESHLRNQLEKQLQPQPQRA----QQLQTILTRQGRLTPPQVWENLSYIATARGGTS 303

Query: 307 EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLG 366
           + YL++  HY  + P+  A Y S+E     ++ P L  + +  AV    G+FEFIP    
Sbjct: 304 DFYLQRFPHYLENTPVFGAAYASAEA--TYSIYPDLDVDGSVLAV--GTGFFEFIP---- 355

Query: 367 NLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
             ES+    EP+ +   EV++G+ Y I+VTN +
Sbjct: 356 --ESEWDAKEPQTLLAVEVEIGQRYRILVTNYS 386


>gi|390338093|ref|XP_003724713.1| PREDICTED: indole-3-acetic acid-amido synthetase GH3.17-like
           [Strongylocentrotus purpuratus]
          Length = 637

 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 106/393 (26%), Positives = 179/393 (45%), Gaps = 30/393 (7%)

Query: 12  ELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDL 71
           +LI+  +T T D    Q   L  IL EN+   Y +   +      E F+   PL T+E  
Sbjct: 88  QLIQVRKTWT-DIRSSQENLLLNILRENSQTSYGKEFKIQEIRSMEQFRQHHPLTTYEHF 146

Query: 72  QPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDEL-METTLQIFRTSYAFR 130
           + Y +R ++G+ S ++T K  T+   +SGTT GK KF+P  + L +  TL    ++ AF 
Sbjct: 147 RKYAERAMEGE-SNVMTPKAPTSFVCTSGTT-GKSKFIPLINRLDLLKTLLGRCSASAFE 204

Query: 131 NREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVI 190
           N        K   F    + +KTKGG+       N+    T   E +       +P    
Sbjct: 205 NCPQLGLLQKQFLFYVDPQITKTKGGV-------NIEAFLTLSREQEDKLIPFTTPTAGF 257

Query: 191 FGPDFHQSLYCHLLCGLIFRE-EIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSS 249
              +   + Y H L  L  RE  I +V S F H +    +  E  W ++ DDI  G +  
Sbjct: 258 HISNLKDACYVHSLFAL--REPTIGVVLSFFIHYIESMMKLIERRWTDIVDDIAHGTIHE 315

Query: 250 RITVPS-IRAAM-SKILKPNPELADLIHKKC-SGLSNWYGLIPELFPNAKYLSGIMTGSM 306
            I + +  RA++ S +   + E A L+ ++   G+    G++  ++P+   + GI   + 
Sbjct: 316 DIQLEADTRASLISALGSGDQERACLLRREFEKGMD---GILKRVWPDLTIVIGI--DNT 370

Query: 307 EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLG 366
             +    R YA  +PL+   YGSSEG IG  +      +   +++L N   +EFI     
Sbjct: 371 RSWPNIERKYAKGIPLLPFVYGSSEGIIGHALWTQ--DKRNGYSLLTNEVVYEFIKFEDT 428

Query: 367 NLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
            L+      +P+     EV++G+ YE+++T ++
Sbjct: 429 ELD------QPQTYLPDEVEIGQRYEVVITQIS 455


>gi|307109529|gb|EFN57767.1| hypothetical protein CHLNCDRAFT_57284 [Chlorella variabilis]
          Length = 956

 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 144/352 (40%), Gaps = 45/352 (12%)

Query: 19  TITKDAERIQRETLRKILEENASAEYLQNLGLNGRTD-PESFKSCVPLVTHEDLQPYIQR 77
           +I KD + +QR  +    E  A+A+       NG  D P      +PL T+ D +  ++ 
Sbjct: 94  SIHKDTDILQRHGVHVPDEWAAAADGAAAATCNGGADSPLVLLHKLPLTTYSDYEELVEA 153

Query: 78  IIDG----DISPI------------LTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQ 121
            +      D S              L+G P+     SSGTT G+ K +P +    ++ + 
Sbjct: 154 AVQAGRTYDASDTASQQRWDAAVARLSGLPLYAFKCSSGTTGGQ-KRMPASMREAQSNVN 212

Query: 122 IFRTSYAFRNREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQ 180
            F    +  N  FP    GK L+F +         G+  G  ++  YR   F        
Sbjct: 213 QFGLFSSHINAAFPGAAAGKELRFPFAGDVEALPSGVQIGVGSSITYRRIRFV------- 265

Query: 181 SQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCD 240
               SP EVI         Y H LC L  R +I  +   FA SL+ A       W  L  
Sbjct: 266 DSWVSPKEVIVAGSVQTCYYLHWLCALRRRHDITALTDIFASSLLLAANLLVEHWRRLMA 325

Query: 241 DIREGVLSSRITVPS-----------------IRAAMSKILKPNPELADLIHKKCSGLSN 283
           D+  G   S +   S                 + AA+   ++P+PELA  + +   G   
Sbjct: 326 DLEAGRCFSWVARSSKGLAPAAAGGLAPPPEGVAAAVDASMEPSPELAQELQQVFDGGRQ 385

Query: 284 WYGLIPELFPNAKYLSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIG 335
             GL+  LFP A Y++ ++TGSM  Y+  LR     +P++SA YG++EG  G
Sbjct: 386 --GLLERLFPGACYVACVLTGSMSKYVPHLRELLPIIPIVSASYGATEGQFG 435


>gi|254788219|ref|YP_003075648.1| GH3 auxin-responsive promoter family protein [Teredinibacter
           turnerae T7901]
 gi|237687085|gb|ACR14349.1| GH3 auxin-responsive promoter family protein [Teredinibacter
           turnerae T7901]
          Length = 630

 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 97/391 (24%), Positives = 176/391 (45%), Gaps = 43/391 (10%)

Query: 21  TKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIID 80
           +K    +Q + LR+++ +NA  +Y +  G +  T  E +++ VP+  + DL+PYI   + 
Sbjct: 96  SKHPREVQLQLLRRVISDNAETKYGKTHGFDKITSVEKYRNSVPVNGYNDLEPYIDEHLK 155

Query: 81  GDISPILTGKPITTISRSSGTTQGKPKFLP----FNDELMETTLQIFRTSYAFRNREFPI 136
           G    ++ GKP    + +SG+T G+PKF+P       E  E + +++  SY     E   
Sbjct: 156 GGADVLVRGKP-CYYATTSGST-GRPKFIPVTRTMEKEAHEGSARLW--SYTLYKNEPRA 211

Query: 137 GKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFH 196
             G  +  +  + +  T+  +  G+ +         K   + ++S+   P E+    D+ 
Sbjct: 212 YSGNIIVIVSPAVEGYTEAKVPYGSIS-----GQYIKNLNENIRSKYTIPYELYEVKDYE 266

Query: 197 QSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITV-PS 255
              YC LL G I  E+  ++ ST   +L       E   + +  DIR G L++   V   
Sbjct: 267 ARYYCMLLLG-IADEDTSMLSSTNPSTLSLLAEKGEQFKDAILADIRAGSLAASCNVNDE 325

Query: 256 IRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPE-LFPNAKYLSGIMT------GSMEH 308
           IRA ++  LKPNPE AD + K C      Y   PE +     Y   ++       G+ + 
Sbjct: 326 IRALVNAKLKPNPERADYL-KSC------YENDPEGMLRPIHYWKKLVVIACWTGGNSKV 378

Query: 309 YLKKLRHYAGDLPLMSADYGSSE--GWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLG 366
           +L +++ + GD+ +    Y +SE  G +  N+N S         +  N  +FEF+ +   
Sbjct: 379 FLNRMKKWYGDVQIKDLGYLASEIRGSVPLNINSS----EGMLTIDEN--FFEFVKEGTN 432

Query: 367 NLESQVLCIEPKPVGLTEVKVGEEYEIIVTN 397
              +    +      + +++VGE Y +  TN
Sbjct: 433 PHHNDNYLM------VDQLEVGERYRLYFTN 457


>gi|428210220|ref|YP_007094573.1| GH3 auxin-responsive promoter [Chroococcidiopsis thermalis PCC
           7203]
 gi|428012141|gb|AFY90704.1| GH3 auxin-responsive promoter [Chroococcidiopsis thermalis PCC
           7203]
          Length = 564

 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 109/411 (26%), Positives = 173/411 (42%), Gaps = 41/411 (9%)

Query: 1   MLEKMETVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFK 60
           +L  ++TV  +   + F   T+  E +Q   LR +L    + E  Q          E F+
Sbjct: 5   LLPLLQTV-AEHTKDNFVKKTRQVEAVQERFLRDLLRAYQATELGQKYEFKDIRTAEQFR 63

Query: 61  SCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLP----FNDELM 116
             VP  ++    PY  RI  G+ + ILT  P+   + SSG+T G  K +P    F + L 
Sbjct: 64  QRVPTSSYSSYAPYCDRIAQGEQN-ILTPDPVVFFNLSSGST-GAHKLIPVTKRFQNSLR 121

Query: 117 ETTL-QIFRTSYAFRNREFPIGKGKALQFIYGSKQ--SKTKGGLNAGTATTNVYRSSTFK 173
              L  I   S A R R    GK  A      S Q   +T GG+  G A+  V R   F 
Sbjct: 122 RPNLTSIGFLSSALRQRGSKFGKAIAT----NSTQLMGRTSGGIPYGPASVGVLRMGKFL 177

Query: 174 AEMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIF---REEIQLVFSTFAHSLVHAFRT 230
            E          P E +   D   SL  H LC L+F   + + + + + F   ++     
Sbjct: 178 CEQI-----FAHPFETLQAAD---SLTRHYLC-LLFALQQPDTRGIVANFPMLILRTCGY 228

Query: 231 FELVWEELCDDIREGVLSSRITV-PSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIP 289
            E   E+   DI +G+L+  + + P +R  + + +  NP  A  + +          L P
Sbjct: 229 LEQYAEDFIRDIDKGMLAPWLQLEPELRLKLERQIVANPNRAKQLQEILQAEGR---LTP 285

Query: 290 E-LFPNAKYLSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELAT 348
           E ++ N  +      G+ + Y ++   Y    P   A   SSEG  G  + P L  + + 
Sbjct: 286 EAVWSNLAFTVAARGGTSDFYFERFPTYFSKTPGFGAVCCSSEGAFG--IYPELNSDASI 343

Query: 349 FAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
            A+     +FEFIPQ   ++E      +PK +  +EVK G  Y I+++N +
Sbjct: 344 LAI--ESAFFEFIPQDQWDVE------QPKTLLPSEVKPGNYYRILMSNYS 386


>gi|427417437|ref|ZP_18907620.1| auxin-responsive GH3 family protein [Leptolyngbya sp. PCC 7375]
 gi|425760150|gb|EKV01003.1| auxin-responsive GH3 family protein [Leptolyngbya sp. PCC 7375]
          Length = 560

 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 97/385 (25%), Positives = 168/385 (43%), Gaps = 33/385 (8%)

Query: 24  AERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDI 83
           A+ IQ   L+K+L+E       + L L+  +  E F+  VP   ++   PY +R   G+ 
Sbjct: 31  AQAIQARFLQKLLKEQQDTALGKALKLDRISSLEEFRQRVPCWHYDGYSPYFERAAAGET 90

Query: 84  SPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTS--YAFRNREFPIGKGK- 140
           + +++  P+   + SSG+T G  K +P    + +T     + +  YAF   +    +G+ 
Sbjct: 91  N-VVSPFPVQEFNMSSGST-GSRKLIPITKRVQQTRSYANQVAMGYAFEQAQ---AQGRG 145

Query: 141 ---ALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQ 197
               L     +   +T+GG+  G  + N  RS+         Q     P + +   D   
Sbjct: 146 LGQLLLTTLMTPLGQTEGGITYGHVSGNQLRST----HPWVFQQLFSQPYDAMLVSDTAA 201

Query: 198 SLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITV-PSI 256
             Y  LL GL  +E++  + + F   ++      E     L DDI  G +S  I + P +
Sbjct: 202 RNYVCLLFGLR-QEKLTSIAANFPLIMLQFCGYLERFGPALIDDIGRGDISQNILLEPEL 260

Query: 257 RAAMSKILKPNPELADLIHKKCSGLSNWYG-LIPE-LFPNAKYLSGIMTGSMEHYLKKLR 314
           R  + K L P P+ A    K+   L   +G L+P  ++PN  +L     G  + Y ++  
Sbjct: 261 RQTLQKRLSPQPQRA----KQLQTLLKQHGCLLPRYVWPNLSFLVTARGGPSDFYFERFD 316

Query: 315 HYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLC 374
            Y G  P+    Y +SE   G+     L  + A  A+  N  +FEF+P        Q   
Sbjct: 317 KYFGKTPIFGGTYAASEATFGSYCR--LDADGAILAIKTN--FFEFVP------PDQWEK 366

Query: 375 IEPKPVGLTEVKVGEEYEIIVTNVA 399
             P+ +   +++VGE Y ++VTN +
Sbjct: 367 SNPQTLLPHQLEVGEYYRVLVTNYS 391


>gi|218439922|ref|YP_002378251.1| GH3 auxin-responsive promoter [Cyanothece sp. PCC 7424]
 gi|218172650|gb|ACK71383.1| GH3 auxin-responsive promoter [Cyanothece sp. PCC 7424]
          Length = 557

 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 106/402 (26%), Positives = 179/402 (44%), Gaps = 54/402 (13%)

Query: 15  EEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPY 74
           E F   T   E  Q + L  +L+   +    Q+         E F+  VP++++    PY
Sbjct: 18  EGFVRQTGHLEATQTQFLLTLLKTYQNTVLGQHWKFEEIKTVEQFRERVPVLSYGFYHPY 77

Query: 75  IQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPF------NDELMETTLQIFRTSYA 128
           + +I  G  + ILT +P+  ++ SSGTT GK K +P       N +++    Q F    A
Sbjct: 78  VDQIAQGQAN-ILTSEPVVYLNLSSGTT-GKHKLIPVTKRSRKNRQIINQVAQGFLAE-A 134

Query: 129 FRNREFPIGK---GKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCS 185
            + R+  +GK     +LQ         T+ G+  G  +    R S F       +     
Sbjct: 135 VQKRQISLGKMLLTSSLQLT-----GYTEAGIPCGPVSVGDLRLSNF-----LYKQIFVH 184

Query: 186 PDEVIFGPDFHQSLYCHLLCGLIFREEIQL-VFSTFAHSLVHAFRTFELVWE---ELCDD 241
           P E +   D    L  H +C L   +   L +F   A+  V A R  + + +   EL  D
Sbjct: 185 PYEALKPSD---DLARHYVCLLFALQYPNLGIFG--ANFPVLALRLADYLEKNALELIQD 239

Query: 242 IREGVLSSRITV-PSIRAAMSKILKPNP----ELADLIHKKCSGLSNWYGLIPEL-FPNA 295
           + +G ++  +T+ P +R  ++K L P P     L +++H +         L P+L +P+ 
Sbjct: 240 LEKGTIAEWLTLEPELRGILTKQLTPQPGRAAHLREILHSEGR-------LTPQLVWPSI 292

Query: 296 KYLSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNI 355
             L     G+ + Y ++   Y G+ P+    Y +SEG  G  V   L  + A  A+  N 
Sbjct: 293 GCLVTARGGTSDFYFQRFSDYFGNTPIFGGIYAASEGAFG--VYHDLDNDGAILAI--NT 348

Query: 356 GYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN 397
           G++EFIP    ++E      +PK +   ++KVGE+Y I+V+N
Sbjct: 349 GFYEFIPSDQWDVE------QPKTLLPQDLKVGEQYRILVSN 384


>gi|379012446|ref|YP_005270258.1| hypothetical protein Awo_c26130 [Acetobacterium woodii DSM 1030]
 gi|375303235|gb|AFA49369.1| hypothetical protein Awo_c26130 [Acetobacterium woodii DSM 1030]
          Length = 573

 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 106/412 (25%), Positives = 188/412 (45%), Gaps = 50/412 (12%)

Query: 3   EKMETVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSC 62
           EK++ +  ++LI+ F  +  + E  Q+  L+ IL+   ++E+ Q +G +  +  E FK  
Sbjct: 25  EKLKQMSNEKLIKSFYFMENNPEYTQKSVLQDILKSAENSEFGQKMGFSEISTIERFKEK 84

Query: 63  VPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLP--FNDELMETTL 120
           +P+  + DL+  I+++  G    +  G   + I+ S  T  G PK +P   N E+++  +
Sbjct: 85  LPISNYSDLEAEIEKLKAGKKDVLFNGATASFIATSGST--GVPKLIPESKNGEIIKGLV 142

Query: 121 -QIFRTSYAFRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAM 179
            QI          E    + K L     S+  KT GG+  G+A+    +     AE+K  
Sbjct: 143 SQIRAILLLMLAPEVMEPQKKILAIANPSEYGKTVGGIPIGSASGQAAKD--LPAELK-- 198

Query: 180 QSQCCSPDEVIFGPDF--HQSLYCHLLCGLIFREEIQLVFSTFAH--SLVHAFRTFELVW 235
             +   P E++   D     + Y  +   L  ++ + +V S  AH   L+   +TF    
Sbjct: 199 -KKMVLPVEMMLAKDLGNEATDYLTIRYALEEKQLVGVVCSNIAHFNILLKKMKTFA--- 254

Query: 236 EELCDDIREGVLSSRITVP-SIRAAMSKILKPNPELADLI------HKKCSGLSNWYGLI 288
            +L DDI  G +SS+I +  ++R  ++  L+PNP+ A+ +      HK+    S W    
Sbjct: 255 GDLLDDIENGQISSKIAISETLREQLTAKLRPNPQRANELRVIYDTHKQLDVASIW---- 310

Query: 289 PELFPNAKYLSGIMTGSMEHYLKKL-RHYAGDLPLMSADYGSSEGWIGANVNPSLPPELA 347
               P    +S  M+ S  + +  + ++    +  +   YG+SEG        ++P    
Sbjct: 311 ----PEFSVISCWMSASAANIVTDIKKNLPNHVKFLEWGYGASEGKF------NIPDRAG 360

Query: 348 TFAVLPNI-GY-FEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN 397
             A LP + GY FEF+P    N E+ +L  E +P        G  YE+IVT+
Sbjct: 361 NPAGLPALFGYFFEFLPVDANNQET-LLAHELEP--------GAYYELIVTS 403


>gi|302810854|ref|XP_002987117.1| hypothetical protein SELMODRAFT_425963 [Selaginella moellendorffii]
 gi|300145014|gb|EFJ11693.1| hypothetical protein SELMODRAFT_425963 [Selaginella moellendorffii]
          Length = 160

 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 52/140 (37%), Positives = 79/140 (56%), Gaps = 5/140 (3%)

Query: 10  VDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHE 69
           ++ LI EFE + K+A  +Q E L  I+E NAS E+LQ+  +   TD +SFK+ VP+V +E
Sbjct: 1   MEALINEFEDMCKNAAAVQEEVLGTIVEHNASCEFLQSYNV---TDADSFKAHVPVVGYE 57

Query: 70  DLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMET-TLQIFRTSYA 128
           D+   I R+ DGD + IL   P+     SSGTT  K K  P   +  +     +++   A
Sbjct: 58  DIAVKIHRMTDGDPASILCKDPVLAFISSSGTTTEKRKAFPLTTKSCDVKNHALYKIGAA 117

Query: 129 FRNREFPIGK-GKALQFIYG 147
           +  R+FP+G    AL F++ 
Sbjct: 118 YIERDFPVGCFPTALAFMHA 137


>gi|443722667|gb|ELU11427.1| hypothetical protein CAPTEDRAFT_104502 [Capitella teleta]
          Length = 433

 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 131/262 (50%), Gaps = 27/262 (10%)

Query: 140 KALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQSL 199
           + L   Y S+ ++T  GL  G  + ++ R   F            +P EV    +   +L
Sbjct: 11  RVLVLSYQSRVTETAAGLRVGPVSAHMSRYVPF----------MVAPREVYDITNEQAAL 60

Query: 200 YCHLLCGLIFRE--EIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPSIR 257
           + H + G + +E   I+ + ST  +S    +R  E  WE +C+DI  G LS+ +  P+ +
Sbjct: 61  HTHAVFGFLEKEVGHIEALMSTLVYSF---WRYVEGNWEVICNDIEHGSLSTDLPAPNKQ 117

Query: 258 -AAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKL-RH 315
             ++S++ KP PE A+ + +  +  + + G+   ++P  +++  + TG    + + L  +
Sbjct: 118 LESISRLFKPQPERANELRQLFA--AGFDGISLRIWPELRFVRTLTTGGFALHAQLLSNY 175

Query: 316 YAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCI 375
           Y   + L+S  + +SEG+IG N++ +  P+   +  +P+  + EFI      L+      
Sbjct: 176 YMKGVKLLSLAHVASEGFIGFNISDN--PDEQIYTAMPDYAFLEFIALSNTGLD------ 227

Query: 376 EPKPVGLTEVKVGEEYEIIVTN 397
           +PK   L E+K+G EYE+++T 
Sbjct: 228 QPKTQFLEELKLGGEYEVVMTT 249


>gi|428210221|ref|YP_007094574.1| GH3 auxin-responsive promoter [Chroococcidiopsis thermalis PCC
           7203]
 gi|428012142|gb|AFY90705.1| GH3 auxin-responsive promoter [Chroococcidiopsis thermalis PCC
           7203]
          Length = 561

 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 95/397 (23%), Positives = 170/397 (42%), Gaps = 56/397 (14%)

Query: 21  TKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIID 80
           T+    +Q   L ++L+ +   E+ +   L      + F+  VP++ +   +P+++RI +
Sbjct: 24  TRRTAEVQERFLLRLLQAHRDTEFGRKYQLGEIKTVDRFRDRVPILPYSSYEPFLERIAN 83

Query: 81  GDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAF-------RNRE 133
           G  + ILT  P+  ++ +SG+T GK K +P        T Q   TS  F       R ++
Sbjct: 84  GKQN-ILTADPVVYLTLTSGST-GKKKMIPTTRRSQNITRQATLTSMGFLTAALRSRGQQ 141

Query: 134 FPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGP 193
           F    GK L      +  +T  G+  G A+  V                  S D+ ++G 
Sbjct: 142 F----GKILLTNSTQQWGRTSAGIPYGPASAGV-----------------LSMDKWLYGQ 180

Query: 194 DFHQSLYCHLLCGLIFREEIQLVF-----------STFAHSLVHAFRTFELVWEELCDDI 242
            F Q      +     R  + L+F           + F   ++      E   E+L  DI
Sbjct: 181 FFAQPYETLQVADSSARHYLALLFALQDPLMRGMLANFPMLILRTCNYLEKFGEDLIHDI 240

Query: 243 REGVLSSRITV-PSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPEL-FPNAKYLSG 300
             G +++ + V P +R A+ + L  NP  A+ + +    L +   L P L + N  +++ 
Sbjct: 241 ETGTIANWLEVEPELRLALEQRLSANPVRANELREI---LQSEGKLTPHLAWSNLSFVAC 297

Query: 301 IMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEF 360
              G+ + Y ++   Y  + P+  A + S+EG    ++   L  + +  A+    G+FEF
Sbjct: 298 ARGGTSDFYFQRFPTYFNNTPIFGAVFSSAEGMF--SIYHELDDDSSILAL--ESGFFEF 353

Query: 361 IPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN 397
           IPQ     E      +PK +  TEV+ GE Y I+ T+
Sbjct: 354 IPQDQWQEE------QPKTLLATEVRSGERYRILTTS 384


>gi|297170439|gb|ADI21470.1| hypothetical protein [uncultured myxobacterium HF0070_11L13]
          Length = 525

 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 93/343 (27%), Positives = 149/343 (43%), Gaps = 20/343 (5%)

Query: 58  SFKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
            +++ VP+  +ED +PYIQR+++G+   +L    I   +RSSGTT G+PK++P +D  + 
Sbjct: 26  DYQAKVPIRRYEDFEPYIQRMVNGE-ENVLCPDKINFFARSSGTT-GEPKYIPIHDVYLT 83

Query: 118 TTLQIFRTSYAFRNREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEM 176
              +  R       + FP + +GK L       +  T GG+  G+ T  +    +     
Sbjct: 84  EFRKPRRVWMRQVMQHFPGLIRGKVLGVHSPKIEGITPGGVPYGSITVAMSGMRSQDELP 143

Query: 177 KAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWE 236
           K        P  V    DF    Y  LL     +E + L  +    +LV   +  +    
Sbjct: 144 KDTFGMEAVPRAVFLVDDFDTKYY--LLLRFATQENVTLAATINPSTLVLIAQKLQKFAP 201

Query: 237 ELCDDIREGVLSSRITVP-SIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNA 295
            L  D+R G L +   +P SI A +   LK +P  A  I        N   L  E++PN 
Sbjct: 202 RLVSDLRNGTLDNWDNIPDSIAAELRHKLKAHPRNAKKIETAIR--ENRLVLPTEIWPNL 259

Query: 296 KYLSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNI 355
             L     G+   YL +L  Y  +   M   Y +SEG     ++  L PE A   V    
Sbjct: 260 VGLFCWKGGNAPFYLNQLDQYFPEKRRMDFGYLASEG----GMSLVLDPEGADGVVAVTG 315

Query: 356 GYFEFIPQRLG--NLESQVLCIEPKPVGLTEVKVGEEYEIIVT 396
              EFIP+ +   NL+  +      P+   +++VG+ Y +I+T
Sbjct: 316 HIIEFIPEEVAESNLQDAI------PLLSHQLEVGQRYRVIIT 352


>gi|307155303|ref|YP_003890687.1| GH3 auxin-responsive promoter [Cyanothece sp. PCC 7822]
 gi|306985531|gb|ADN17412.1| GH3 auxin-responsive promoter [Cyanothece sp. PCC 7822]
          Length = 556

 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 108/398 (27%), Positives = 174/398 (43%), Gaps = 46/398 (11%)

Query: 15  EEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPY 74
           EEF   T   E +Q + L  +L+   +    Q   +      E F+  +P++ +    PY
Sbjct: 18  EEFIAQTHHLESVQNQFLLTLLKTYQNTVLGQKWKIGEIKTVEQFRDRIPILPYSFYHPY 77

Query: 75  IQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFND------ELMETTLQIFRTSYA 128
           +++I  G  + ILT  P+  ++ +SGTT  K K +P         +L+    Q F    A
Sbjct: 78  MEQISQGQAN-ILTSDPVVYLNLTSGTT-SKKKLIPVTKRSRKKRQLVNQVAQGFLAE-A 134

Query: 129 FRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDE 188
            + R   I  GK L          T+ G+  G  +    R S F       +     P +
Sbjct: 135 IQKRG--ISLGKMLLTSSVKLAGYTQSGIPYGPVSVGDLRLSNF-----LYKQIFVHPYQ 187

Query: 189 VIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRT---FELVWEELCDDIREG 245
            +   D   SL  H +C L+F  +   +    A+  V A R     E   EEL +D++ G
Sbjct: 188 ALQSSD---SLARHYVC-LLFALQYPYLGVLGANFPVLALRLADYLESYAEELIEDLKTG 243

Query: 246 VLSSRITV-PSIRAAMSKILKPNPELADLIHK--KCSGLSNWYGLIPELFPNAKYLSGIM 302
            ++  + + P +RA++ K LKP P+ A  + +  K  G      L P+L  ++  +  I+
Sbjct: 244 TIAPWLPLEPPLRASLEKQLKPQPQRAARLREILKAEGC-----LTPQLAWSS--IGCIV 296

Query: 303 T---GSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFE 359
           T   G+   Y ++   + GD P+    Y S+E   G  V   L  +    A+  N G++E
Sbjct: 297 TARGGTSSFYFQRFPAHFGDTPVFGGIYASAEATFG--VYSDLNDDHTILAI--NSGFYE 352

Query: 360 FIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN 397
           FIPQ     E      +PK +   EVKVG+ Y I+VTN
Sbjct: 353 FIPQEQWEAE------QPKTLLPQEVKVGQPYRILVTN 384


>gi|428778849|ref|YP_007170635.1| GH3 auxin-responsive promoter-binding protein [Dactylococcopsis
           salina PCC 8305]
 gi|428693128|gb|AFZ49278.1| GH3 auxin-responsive promoter-binding protein [Dactylococcopsis
           salina PCC 8305]
          Length = 559

 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 99/400 (24%), Positives = 173/400 (43%), Gaps = 41/400 (10%)

Query: 11  DELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHED 70
           ++LI+E    TK    +Q + L+ +L+ + + E  ++  L      + F+S +P++ +  
Sbjct: 18  NQLIQE----TKQPLAVQEQYLKTLLQHHQNTELGRHYHLEEIKTIDQFRSRLPILPYSA 73

Query: 71  LQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFR 130
             PY +RI  G+ + +LT  P+  I+ +SG+T GK K +P       +  +    S  F 
Sbjct: 74  YDPYTERIAKGEKN-LLTPDPVIYINVTSGST-GKQKKIPVTQRFQNSLGKANLASMGFL 131

Query: 131 NREFPIGKGKALQFIYGSK----QSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSP 186
           +      +GK L+ +  +     +  T GG+  G A   V  +  +  E          P
Sbjct: 132 DSALR-QRGKKLEKLLVTNPALIKGYTTGGIKYGPAGPGVLHTRRWLYEW-----LFAHP 185

Query: 187 DEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGV 246
              +   D     Y  LL  L    E+  + + F   ++   R  E       DD+ +G 
Sbjct: 186 FTTLQVEDSFTRNYLCLLFSLR-NPELGGLIANFPMLILRICRYLETYAASFVDDLEKGS 244

Query: 247 LSSRITV-PSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPEL-FPNAKYLSGIMTG 304
           L + + + P +R+ + +     P+ A  + +          L P L + N  Y++    G
Sbjct: 245 LPTWLNLDPKMRSRLDRRFSAAPKRAQQLREILRSEGR---LTPPLAWKNLAYIATARGG 301

Query: 305 SMEHYLKKLRHYAGD-LPLMSADYGSSEGWIG----ANVNPSLPPELATFAVLPNIGYFE 359
           + + Y +    Y  D LP   A Y ++EG  G     NV+ S+        + PN G+FE
Sbjct: 302 TSDFYFQHFSDYDLDQLPAFGAAYSTAEGTCGVYPDVNVDASV--------LTPNTGFFE 353

Query: 360 FIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
           FIP      ES+    +P  +  TEVK GE Y I++TN +
Sbjct: 354 FIP------ESEWETEQPNTLLATEVKPGERYRILMTNYS 387


>gi|443727573|gb|ELU14275.1| hypothetical protein CAPTEDRAFT_208419 [Capitella teleta]
          Length = 562

 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 103/381 (27%), Positives = 173/381 (45%), Gaps = 31/381 (8%)

Query: 23  DAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGD 82
           D  + Q E L K LE N + EY  +       +   F    PL  +   + YIQR+ +G+
Sbjct: 31  DIGKAQEEFLLKALEANKNTEYGLHCNFASIRNRTQFVQQHPLTQYSHYEEYIQRVCNGE 90

Query: 83  ISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFPIGKGKAL 142
              +L  K +  ++ SSGTT  KPK +P  +  +   ++  +T   F N    I K   L
Sbjct: 91  -KNVLCAKKLAFVAISSGTT-AKPKSIPVYEGFV---IEFLKTLGFFLNH--IINKVNTL 143

Query: 143 QFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQSLYCH 202
           Q I  S +   K  L A     N  +  TF + +  +     +P +    P+     Y  
Sbjct: 144 QRI-ASIRFTVKDTLLA-----NGVKMGTFSSHVSPLPPYAITPQKAGKIPNESSQSYVT 197

Query: 203 LLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITV-PSIRAAMS 261
            L  L   +++Q +   F+ S+   ++T EL  E L  D+  G LS  + V   +R  + 
Sbjct: 198 ALFALS-EKDLQYIDGMFSSSVFTLYKTIELNGERLVADLASGSLSKGLDVGDEVRKVVD 256

Query: 262 KILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKL-RHYAGDL 320
           + LKPNP  A  +  + +  ++   L   L+P  K ++   TG  E + + L + +  D+
Sbjct: 257 RHLKPNPIRAAEVWGELNQGNDRLAL--RLWPELKLVTMTTTGEFEAHARLLAKSFLKDV 314

Query: 321 PLMSADYGSSEGWIGANVNPSLPPELATF---AVLPNIGYF-EFIPQRLGNLESQVLCIE 376
            L +  YGS+EG IG  + P  P + ATF   +   N+  F EFI       E  +    
Sbjct: 315 CLQTLVYGSTEGSIG--IVP-FPQKGATFEQKSYAFNLFIFLEFIA------EENIAEDN 365

Query: 377 PKPVGLTEVKVGEEYEIIVTN 397
           P  + + ++++G+ YEI+++N
Sbjct: 366 PPTLFVDQLELGKSYEIVLSN 386


>gi|421609450|ref|ZP_16050644.1| GH3 auxin-responsive promoter family protein [Rhodopirellula
           baltica SH28]
 gi|408499780|gb|EKK04245.1| GH3 auxin-responsive promoter family protein [Rhodopirellula
           baltica SH28]
          Length = 559

 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 95/394 (24%), Positives = 165/394 (41%), Gaps = 29/394 (7%)

Query: 14  IEEFETITKDAER---IQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHED 70
           I   +    DAER   IQRE L   + +NA   + ++ G +     E F+  VP+  +E 
Sbjct: 18  IGRLQRYLADAERARDIQRENLLHRIHQNADTAFGRDHGFSEIRTLEDFRRRVPIAGYEA 77

Query: 71  LQPYIQRIIDGDISPIL-TGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAF 129
            +PY+ R+I G+ + +      +   + +SGTT   PK +P  ++        ++     
Sbjct: 78  ARPYVDRVIQGETTALFPENTKVVMFATTSGTTD-HPKMIPVTEDFYRQYKAGWQYWGTG 136

Query: 130 RNREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKA--MQSQCCSP 186
             R++P + + K+LQF      ++T  G   G         S   AE +   + S    P
Sbjct: 137 VYRDYPHLLQMKSLQFSSHWNVTQTPSGAPCGNI-------SGLAAETRPFYIGSLFVLP 189

Query: 187 DEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGV 246
             VI   +     Y  L   L   + +  + +    +LV   +  + + E L  DI +G 
Sbjct: 190 ACVIQITEHLAKHYTALRLSLAC-DRVGKIVTANPSTLVEVAKFADTMKETLIRDIHDGT 248

Query: 247 LSSRITVP-SIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGS 305
           L+    +P +IR  +   L+PNP  A  + +      + Y    + +PN   L+    GS
Sbjct: 249 LTGDQPIPDAIRQQLRSRLRPNPRRARQLQQIVDRTGHLYP--KDAWPNLTLLAVWTGGS 306

Query: 306 MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRL 365
           +  YL +L  Y GD  +      +SEG +   +    P  +  ++      +FEFIP   
Sbjct: 307 VGLYLNQLPEYYGDAAIRDHGLSASEGRMTVPLQNGSPSGMLDYSS----HHFEFIP--- 359

Query: 366 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
              ES+     P  +   E+  GE Y I++T  +
Sbjct: 360 ---ESERDSTSPNVLEAWELTEGENYFIVLTTAS 390


>gi|390952277|ref|YP_006416036.1| GH3 auxin-responsive promoter-binding protein [Thiocystis
           violascens DSM 198]
 gi|390428846|gb|AFL75911.1| GH3 auxin-responsive promoter-binding protein [Thiocystis
           violascens DSM 198]
          Length = 556

 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 93/392 (23%), Positives = 169/392 (43%), Gaps = 35/392 (8%)

Query: 22  KDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDG 81
           ++ E+ QR  L + L  NA+  + Q         P  +   VP+ + E + PY+ RII G
Sbjct: 25  RNLEQTQRRLLDERLRRNATTVFGQTHDFARIQSPAEYARTVPVSSWETVDPYVDRIIAG 84

Query: 82  DISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFPIGKGKA 141
           + + +LT  P+  +   +  T GKPK +P   E       + +  +AF   E      + 
Sbjct: 85  ETN-VLTAGPLPRMFNKTSGTTGKPKLIPVTPESTRGN-ALNQKVWAFAALE------RH 136

Query: 142 LQFIYGSKQSKTKGGLNAGTATTNVYRSST----FKAEMKAMQSQCCSPDEVIFGPDFHQ 197
            +F+ G         ++  TA+TN+   +      +      +S+   P + I   DF  
Sbjct: 137 PRFLSGKVFPVVNKAVDGHTASTNIPYGAVSGLMVRDAHPLARSKYAYPYDAIEIDDFSA 196

Query: 198 SLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVP-SI 256
             Y  + C +   E +  +  +  ++L+  F + +    +L  DI +G LS    +P +I
Sbjct: 197 RRYAMMRCAV--PESVSFIPGSNPNALLKLFESADACKADLFRDIHDGTLSENYDIPAAI 254

Query: 257 RAAMSKILKPNPELADLIHKKCSGLSNWYGLIP-ELFPNAKYLSGIMTGSMEHYLKKLRH 315
           RA +S+  KPNP  A  + ++         L P + +P  K +     G++  +   L  
Sbjct: 255 RAVLSRRFKPNPNRARELERRAGQAGR---LQPRDYWPELKLIGCWKGGTVGQFAPHLHE 311

Query: 316 YAG-DLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIP-QRLGNLESQVL 373
           +   +L L    Y +SE  I   ++      L T     +  +FEFIP +  G  +++VL
Sbjct: 312 WCSPELTLRDTGYMASEAHITIPISDEGNSGLLTI----HTNFFEFIPEEESGRPDARVL 367

Query: 374 CIEPKPVGLTEVKVGEEYEIIVTNVAVAGSLF 405
                     E+++G  Y+I++T    AG L+
Sbjct: 368 MAH-------ELEIGVPYQILLT---TAGGLY 389


>gi|390358799|ref|XP_003729339.1| PREDICTED: indole-3-acetic acid-amido synthetase GH3.2-like
           [Strongylocentrotus purpuratus]
          Length = 309

 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 140/306 (45%), Gaps = 28/306 (9%)

Query: 18  ETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQR 77
           E   K+  + Q E L+ ILE N + EY++  GL+  T     +   PL T+E  +P++ R
Sbjct: 16  EEAWKNPRKTQEEYLKAILEVNINTEYVKLYGLDSVTSLRDLREKHPLTTYERYRPFVDR 75

Query: 78  IIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFPIG 137
           +  G+   I+TG+     + +SGTT GK K LP+    +     ++  +   R   F  G
Sbjct: 76  MAKGE-QGIMTGEQTIRFALTSGTT-GKSKMLPYGQSFLTILSTLYMVNIHARVNAF--G 131

Query: 138 KGKALQF---IYGS-KQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGP 193
            G  LQ    +Y + K+  T+ G+  G A       S     MK +     +P E     
Sbjct: 132 YGSLLQREINVYTAPKRRYTETGIPIGPA-------SMIPPSMKPLLVIYATPGEGFQVE 184

Query: 194 DFHQSLYCHLLCGLIFRE-EIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRIT 252
           D + +LY HLL GL  R+  ++ V   F  +++ A +  E  W +   DI  G +S+   
Sbjct: 185 DPNDALYVHLLFGL--RDPNLRSVSCNFTSTVMSAMQLIEKRWPDFVRDIEIGTVSTNNV 242

Query: 253 VPSIRAAMSKIL-KPNPE-LADLIHKKCSGLSNWYGLIPELFPNAKYLS-----GIMTGS 305
            P I   + + + + +PE  ADL  +   G     G++  ++P  K++      GI    
Sbjct: 243 PPEIHQVLVREMGEGDPERAADLKREFEKGFE---GILRRVWPCLKFVQASDTVGIKQKL 299

Query: 306 MEHYLK 311
           ++ YLK
Sbjct: 300 LKSYLK 305


>gi|417304760|ref|ZP_12091766.1| GH3 auxin-responsive promoter family protein [Rhodopirellula
           baltica WH47]
 gi|327538940|gb|EGF25578.1| GH3 auxin-responsive promoter family protein [Rhodopirellula
           baltica WH47]
          Length = 559

 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 94/394 (23%), Positives = 165/394 (41%), Gaps = 29/394 (7%)

Query: 14  IEEFETITKDAER---IQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHED 70
           I   +    DAER   IQRE L   + +NA   + ++ G +     E F+  VP+  +E 
Sbjct: 18  IGRLQRYLADAERARDIQRENLLHRIRQNADTAFGRDHGFSEIRTLEDFRRRVPIAGYEA 77

Query: 71  LQPYIQRIIDGDISPIL-TGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAF 129
            +PY+ R+I G+ + +      +   + +SGTT   PK +P  ++        ++     
Sbjct: 78  ARPYVDRVIQGETTALFPENTKVVMFATTSGTTD-HPKMIPVTEDFYRQYKAGWQYWGTG 136

Query: 130 RNREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKA--MQSQCCSP 186
             R++P + + K+LQF      ++T  G   G         S   AE +   + S    P
Sbjct: 137 VYRDYPHLLQMKSLQFSSHWNVTQTPSGAPCGNI-------SGLAAETRPFYIGSLFVLP 189

Query: 187 DEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGV 246
             VI   +     Y  L   L   + +  + +    +LV   +  + + E L  DI +G 
Sbjct: 190 ACVIQITEHLAKHYTALRLSLAC-DRVGKIVTANPSTLVEVAKFADTMKETLIRDIHDGT 248

Query: 247 LSSRITVP-SIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGS 305
           L+    +P +IR  +   L+PNP  A  + +      + Y    + +P+   L+    GS
Sbjct: 249 LTGDQPIPDAIRQQLRSRLRPNPRRARQLQQIVDRTGHLYP--KDAWPDLTLLAVWTGGS 306

Query: 306 MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRL 365
           +  YL +L  Y GD  +      +SEG +   +    P  +  ++      +FEFIP   
Sbjct: 307 VGLYLNQLPEYYGDAAIRDHGLSASEGRMTVPLQNGSPSGMLDYSS----HHFEFIP--- 359

Query: 366 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
              ES+     P  +   E+  GE Y I++T  +
Sbjct: 360 ---ESERDSTSPNVLEAWELTEGENYFIVLTTAS 390


>gi|443695112|gb|ELT96087.1| hypothetical protein CAPTEDRAFT_195611 [Capitella teleta]
          Length = 595

 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 98/395 (24%), Positives = 177/395 (44%), Gaps = 44/395 (11%)

Query: 16  EFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYI 75
           +F T  KD +R Q   L + L  NAS EY +        + E +    P+  ++  + YI
Sbjct: 49  KFITRCKDVKRTQENLLLRTLTANASTEYGRQWNFESINNREQYVEQHPVTEYKHYENYI 108

Query: 76  QRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP 135
           QR+ +G+   ++  + +  ++ SSGTT GK K +P    +    ++ F T+  F    F 
Sbjct: 109 QRVCNGE-KNVMCARELCFVAMSSGTT-GKFKKIP----IFSGAIKQFMTNLGFF-LNFI 161

Query: 136 IGKGKALQFI----YGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIF 191
               K LQ +    + +K    + G+  G   T+ Y        +  +     +P     
Sbjct: 162 AVHMKGLQRVAVLRFKAKDRFAECGVRMGP--TSCY--------LSPLPPYGVTPQGAGM 211

Query: 192 GPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRI 251
             + HQ  Y   L  L  ++ +Q + +  A   +  F+T E   E+L  D+R G LS  +
Sbjct: 212 IQNEHQQCYVTALFILAVKD-LQYIDAMLAPMCLTLFKTIEQNAEKLVTDLRRGRLSEEL 270

Query: 252 TVPS-IRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYL 310
            V   +RA +++ L  +P  A  +  +    ++   L   L+P+ K +    TG  E   
Sbjct: 271 GVDDDVRAVVNEHLNADPSRAAEVEVELRKGNDRLAL--RLWPHLKMIGMNTTGEFESSA 328

Query: 311 KKLR-HYAGDLPLMSADYGSSEGWIGA-------NVNPSLPPELATFAVLPNIGYFEFIP 362
           + LR  +  D+ + +  + +SEG IG        +VN     E +++A   +  + EFIP
Sbjct: 329 RLLRASFLKDVFIKTLIHAASEGNIGIVPEAFKDSVN-----EPSSYAFSHSTVFLEFIP 383

Query: 363 QRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN 397
                 E  +  + P+ + L ++++G+ YEI+VTN
Sbjct: 384 ------EENIGEVNPRTLFLEQLELGKSYEIVVTN 412


>gi|32477628|ref|NP_870622.1| auxin-responsive-like protein [Rhodopirellula baltica SH 1]
 gi|32448182|emb|CAD77699.1| probable auxin-responsive-like protein [Rhodopirellula baltica SH
           1]
          Length = 559

 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 92/392 (23%), Positives = 164/392 (41%), Gaps = 25/392 (6%)

Query: 14  IEEFETITKDAER---IQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHED 70
           I   +    DAER   IQRE L   + +NA   + ++ G +     E F+  VP+  +E 
Sbjct: 18  IGRLQRYLADAERARDIQRENLLHRIHQNADTAFGRDHGFSEIRTLEDFRRRVPIAGYEA 77

Query: 71  LQPYIQRIIDGDISPIL-TGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAF 129
            +PY+ R+I G+ + +      +   + +SGTT   PK +P  ++        ++     
Sbjct: 78  ARPYVDRVIQGETTALFPENTKVVMFATTSGTTD-HPKMIPVTEDFYRQYKAGWQYWGTG 136

Query: 130 RNREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDE 188
             R++P + + K+LQF      ++T  G   G  +     +  F      + S    P  
Sbjct: 137 VYRDYPHLLQMKSLQFSSHWNVTQTPSGAPCGNISGLAAETRPF-----YIGSLFVLPAC 191

Query: 189 VIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLS 248
           VI   +     Y  L   L   + +  + +    +LV   +  + + E L  DI +G L+
Sbjct: 192 VIQITEHLAKHYTALRLSLAC-DRVGKIVTANPSTLVEVAKFADTMKETLIRDIHDGTLT 250

Query: 249 SRITVP-SIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSME 307
               +P +IR  +   L+PNP  A  + +      + Y    + +P+   L+    GS+ 
Sbjct: 251 GDQPIPDAIRQQLRSRLRPNPRRARQLQQIVDRTGHLYP--KDAWPDLTLLAVWTGGSVG 308

Query: 308 HYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGN 367
            YL +L  Y GD  +      +SEG +   +    P  +  ++      +FEFIP     
Sbjct: 309 LYLNQLPEYYGDAAIRDHGLSASEGRMTVPLQNGSPSGMLDYSS----HHFEFIP----- 359

Query: 368 LESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
            ES+     P  +   E+  GE Y I++T  +
Sbjct: 360 -ESERDSKTPHVLEAWELTEGENYFIVLTTAS 390


>gi|288942517|ref|YP_003444757.1| alpha-L-glutamate ligase [Allochromatium vinosum DSM 180]
 gi|288897889|gb|ADC63725.1| alpha-L-glutamate ligase, RimK family [Allochromatium vinosum DSM
           180]
          Length = 851

 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 100/391 (25%), Positives = 170/391 (43%), Gaps = 32/391 (8%)

Query: 12  ELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDL 71
           EL++ F       ERIQ++ L  IL+ NA  E+ Q  G         F+  VP+    D+
Sbjct: 321 ELVQLFMGACGSVERIQQQVLLDILQRNAHTEFGQTHGFEAIRSVAEFRRRVPVREWPDV 380

Query: 72  QPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRN 131
            P   R+  G    +  G+P   IS ++GTT G  K +P + E       + R   A   
Sbjct: 381 APDALRLEQGAKDLLFAGQPTHFIS-TTGTT-GAFKNIPESAEGEFAKSLVSRIRTALLI 438

Query: 132 REFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVI 190
           +  P +  G  +     +   +T  G+  G A+       T       +Q +   P  V+
Sbjct: 439 KLAPKLLDGFFIPLSNPAVLGQTACGIPVGFAS-----GLTLAGTSPEIQRRLAFPPAVL 493

Query: 191 FGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSR 250
             PD  ++L   +L   + + E++L+       +     T +   + L DDI  G LS+ 
Sbjct: 494 QAPD-RETLDYLILRFALAKPEVRLLVGNNPGRMTALLETADQHRDRLIDDIAHGTLSAA 552

Query: 251 ITVPS-IRAAMSKILKPNPELADLIHKKCSGLSNWYGLIP-ELFPNAKYLSGIMTGSMEH 308
           + + S +RA + + L P+PE A  +    +       L P + +PN + +S  + G++  
Sbjct: 553 LPLASDLRATLERDLSPDPERARALRDMAARRGR---LEPRDYWPNLRVISCWLGGTIGR 609

Query: 309 YLKKLRH-YAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYF-EFIPQRLG 366
           YL+ LR     ++ L+   YG+SEG     + P +     +   L  +GYF EF P   G
Sbjct: 610 YLEGLRPLLPENVLLVDCGYGASEGKFNVPMKPGV-----SAGPLAILGYFLEFQPLDGG 664

Query: 367 NLESQVLCIEPKPVGLTEVKVGEEYEIIVTN 397
                      +P+   E++ G+EY +IVT+
Sbjct: 665 -----------EPLLAHELEDGQEYGLIVTS 684


>gi|297607504|ref|NP_001060084.2| Os07g0576100 [Oryza sativa Japonica Group]
 gi|125558911|gb|EAZ04447.1| hypothetical protein OsI_26594 [Oryza sativa Indica Group]
 gi|255677910|dbj|BAF21998.2| Os07g0576100 [Oryza sativa Japonica Group]
          Length = 151

 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 45/105 (42%), Positives = 67/105 (63%), Gaps = 5/105 (4%)

Query: 13  LIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGR-TDPESFKSCVPLVTHEDL 71
           LIEE   +T + + +Q   L +IL  NA AEYL   GL+   TD  +F++ VP+ +++DL
Sbjct: 34  LIEE---LTSNVDAVQERVLAEILGRNADAEYLDKCGLDASDTDRATFRAKVPVASYDDL 90

Query: 72  QPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPF-NDEL 115
           +PY++RI +GD SPIL+  PI     SSGT+ G+ K +P   DE+
Sbjct: 91  KPYVKRIANGDRSPILSTHPIIEFFTSSGTSAGERKLMPIVTDEM 135


>gi|288942514|ref|YP_003444754.1| GH3 auxin-responsive promoter [Allochromatium vinosum DSM 180]
 gi|288897886|gb|ADC63722.1| GH3 auxin-responsive promoter [Allochromatium vinosum DSM 180]
          Length = 560

 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 93/393 (23%), Positives = 172/393 (43%), Gaps = 37/393 (9%)

Query: 22  KDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDG 81
           ++ E+ QR  L + LE NA   + +  G      P  +   +P+ + E + PY+ RII G
Sbjct: 25  RNLEQTQRRLLEERLERNADTVFGREHGFARLKSPADYARALPVSSWETVDPYVDRIIAG 84

Query: 82  DISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFPIGKGKA 141
           + S +LT  P+ ++   +  T GKPK +P   E  +    + +  +AF         G  
Sbjct: 85  E-SHVLTAGPLPSMFNKTSGTTGKPKLIPVTPESKQGN-ALNQKVWAF------AAVGTH 136

Query: 142 LQFIYGSKQSKTKGGLNAGTATTNVYRSST----FKAEMKAMQSQCCSPDEVIFGPDFHQ 197
            +F+ G         +   T  TN+   +      +      +++   P + I   DF+ 
Sbjct: 137 PRFLIGKVFPIVNKAVEGYTPHTNIPYGAVSGLMVRDAHPLARAKYAYPYDAIEIEDFNA 196

Query: 198 SLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPS-I 256
             Y  + C +   E +  + ++  ++L+  F + +    +L  DI +G LS+   +P  I
Sbjct: 197 RRYAMMRCAV--PESVSFIPASNPNALLKLFESADEHKADLLRDIHDGTLSANHDIPGPI 254

Query: 257 RAAMSKILKPNPELADLIHKKCSGLSNWYGLIP--ELFPNAKYLSGIMTGSMEHYLKKLR 314
           R A+S+  KPNP  A    ++   L+   G +   + +P+ K +     G++  + + L 
Sbjct: 255 REALSRRFKPNPGRA----RELERLAERAGRLQPRDYWPDLKLIGCWKGGTVGQFAQHLH 310

Query: 315 HYAG-DLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIP-QRLGNLESQV 372
            +    L L    Y +SE  I   ++      L T     +  YFEFIP +  G  +++V
Sbjct: 311 DWCSPQLKLRDTGYMASEAHITIPISDEGNSGLLTI----HTNYFEFIPEEEFGRPDARV 366

Query: 373 LCIEPKPVGLTEVKVGEEYEIIVTNVAVAGSLF 405
           L          E+++G  Y+I++T    AG L+
Sbjct: 367 LMAH-------ELEIGVPYQILLT---TAGGLY 389


>gi|392308913|ref|ZP_10271447.1| GH3 auxin-responsive promoter family protein [Pseudoalteromonas
           citrea NCIMB 1889]
          Length = 568

 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 87/394 (22%), Positives = 175/394 (44%), Gaps = 27/394 (6%)

Query: 12  ELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDL 71
           EL+  F +   +  + Q + LR IL+++   ++  +   +     +++++ VPL  ++ L
Sbjct: 19  ELMNAFMSGAHNCRQTQLDLLRSILQKHGHTQFGTDHNFDDVVTYDNYRNQVPLQDYDSL 78

Query: 72  QPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQ--IFRTSYAF 129
            PY+++ + G    +++G P    + S  T  G+PK++P   E      +      SY+ 
Sbjct: 79  YPYMEKHLQGIPDQLVSGNPCYYATTSGST--GEPKYIPVTTEQRSGAHKGSAMLWSYSL 136

Query: 130 RNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEV 189
                   +G  +  +  + +     G   G+ +         K    A++++   P EV
Sbjct: 137 ACNSPEAMQGNWVVIVSPAVEGYAPDGTPFGSTS-----GQYVKDLDPAIKAKYSIPYEV 191

Query: 190 IFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSS 249
               D+    YC LL GL     + LV ST   +L       + + E L +DIR G+L  
Sbjct: 192 YEIADYDARYYCILLLGLA-DNNVSLVSSTNPSTLSLLCNKADDMKERLINDIRLGILDK 250

Query: 250 RITVP-SIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIP-ELFPNAKYLSGIMTGSME 307
            + +P +IR  +   L PNPE A+ + ++C      + L P   +P+ + ++    G+  
Sbjct: 251 TLVLPEAIRKLVEDRLTPNPERANYL-EQCIEQDEEHKLRPIHYWPDLEVVATWTGGNSA 309

Query: 308 HYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNI--GYFEFIPQRL 365
            ++ K++ + G + +         G++ + +  S+P +L     +  I   +FEFI  R 
Sbjct: 310 TFIDKMQAWYGKVNIKDL------GYLASEIRGSVPLDLNRGDGVLTIEDNFFEFI--RT 361

Query: 366 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
             +++      PK     E+++G +Y +  TN A
Sbjct: 362 DEIDN----ANPKTYLADEIELGSQYYLFFTNKA 391


>gi|333993545|ref|YP_004526158.1| GH3 auxin-responsive promoter superfamily [Treponema azotonutricium
           ZAS-9]
 gi|333737328|gb|AEF83277.1| GH3 auxin-responsive promoter superfamily [Treponema azotonutricium
           ZAS-9]
          Length = 566

 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 94/399 (23%), Positives = 177/399 (44%), Gaps = 36/399 (9%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLN---GRTDP----ESFKSCVPLV 66
           I E +  +K+A + Q +TLR IL  +    Y +    +     + P    E ++  V + 
Sbjct: 24  IGELKKASKNAIKAQEQTLRNILSASKDTVYGKEHHFDEVLAASSPQDLFERYRKEVSIN 83

Query: 67  THEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRT- 125
            +EDL+PY++R   G+   +  GKP    + +SGTT+ +PK++P  +   +   ++    
Sbjct: 84  DYEDLRPYVERHKQGEAGVLFPGKP-KMYATTSGTTK-EPKWIPITERYYQEVYKVMNQL 141

Query: 126 -SYAFRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCC 184
             YA    +  +  GK L  +  + +     G   G+ +    R       MK +     
Sbjct: 142 WFYAMITNKPKVFYGKTLSIVGKATEGAAPDGTVFGSISGISQRD--IPGFMKVLHP--- 196

Query: 185 SPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIRE 244
           +P ++    D+    Y  +  G+   ++  L+ +    +LV         +++  +DI +
Sbjct: 197 APADIFNIADYKARYYTIMRMGI--EQDCTLIITANPSTLVEMQNNANEFYDDYVEDIEK 254

Query: 245 GVLSSRITVPS-IRAAMSKILKPNPELADLIHKKCSGLSNWYG-LIP-ELFPNAKYLSGI 301
           G LS +  +P  IRA +++ LKPNPE A  + +    L   YG ++P   +PN + ++  
Sbjct: 255 GTLSRKFPIPDEIRAVLAERLKPNPERAAELRR----LKAQYGNVLPRHYWPNMQAVNVW 310

Query: 302 MTGSMEHYLKKLRH-YAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEF 360
             G+   +L+K++  +          Y ++E   G  +  + P  +    V  +  Y EF
Sbjct: 311 FCGNTGIFLEKVKDSFPKTCVFHEFGYFATECRPGIVLKSNTPDTV----VFGHKVYVEF 366

Query: 361 IPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
           +       ES++    P+   + EVK GE Y +IVT  A
Sbjct: 367 VH------ESELESENPRVYQMYEVKKGERYCLIVTTSA 399


>gi|443695109|gb|ELT96084.1| hypothetical protein CAPTEDRAFT_195609 [Capitella teleta]
          Length = 647

 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 99/395 (25%), Positives = 177/395 (44%), Gaps = 44/395 (11%)

Query: 16  EFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYI 75
           +F T  KD +R Q   L + L  NAS EY +        + E +    P+  ++  + YI
Sbjct: 92  KFITRCKDIKRTQENLLLRTLTANASTEYGRQWNFESINNREQYVEQHPVTEYKHYENYI 151

Query: 76  QRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP 135
           QR+ +G+   ++  + +  ++ SSGTT GK K +P    +    ++ F T+  F    F 
Sbjct: 152 QRVCNGE-KNVMCARELCFVAMSSGTT-GKFKKIP----IFSGAIKQFMTNLGFF-LNFI 204

Query: 136 IGKGKALQFI----YGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIF 191
               K LQ +    + +K    + G+  G   T+ Y S         +     +P     
Sbjct: 205 AVHMKGLQRVAVLRFKAKDRFAECGVRMGP--TSCYLS--------PLPPYGVTPQGAGM 254

Query: 192 GPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRI 251
             + HQ  Y   L  L  ++ +Q + +  A   +  F+T E   E+L  D+R G LS  +
Sbjct: 255 IQNEHQQCYVTALFILAVKD-LQYIDAMLAPMCLTLFKTIEQNAEKLVTDLRRGRLSEEL 313

Query: 252 TVPS-IRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYL 310
            V   +RA +++ L  +P  A  +  +    ++   L   L+P+ K +    TG  E   
Sbjct: 314 GVDDDVRAVVNEHLNADPSRAAEVGVELHKGNDRLAL--RLWPHLKMIGMNTTGEFESSA 371

Query: 311 KKLR-HYAGDLPLMSADYGSSEGWIGA-------NVNPSLPPELATFAVLPNIGYFEFIP 362
           + LR  +  D+ + +  + +SEG IG        +VN     E +++A   +  + EFIP
Sbjct: 372 RLLRASFLKDVFIKTLIHAASEGNIGIVPEAFKDSVN-----EPSSYAFSHSTVFLEFIP 426

Query: 363 QRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN 397
                 E  +  + P+ + L ++++G+ YEI+VTN
Sbjct: 427 ------EENIGEVNPRTLFLEQLELGKSYEIVVTN 455


>gi|390349852|ref|XP_003727296.1| PREDICTED: probable indole-3-acetic acid-amido synthetase
           GH3.5-like [Strongylocentrotus purpuratus]
          Length = 688

 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 96/395 (24%), Positives = 180/395 (45%), Gaps = 47/395 (11%)

Query: 22  KDAERIQRET---LRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRI 78
           +D+ R Q+     L   L   + ++Y ++           F+   PL  +     Y+ R+
Sbjct: 135 RDSARCQQSQENFLMNQLRIRSHSQYGRDFDFGTIKSVAEFRERHPLTRYSHYAKYMDRV 194

Query: 79  IDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTL-QIFRTSYAFRNREF--- 134
             G+   ++ G P + +  +SGTT GKPK +  + E     L +I    + F   ++   
Sbjct: 195 AAGESDIVIPGFP-SRLGITSGTT-GKPKLIAISKERNVAFLFKIMPMVFHFVKVQYTPA 252

Query: 135 --PIGKGKALQFIYGSKQSKTKGGLNAGTATT-------NVYRSSTFKAEMKAMQSQCCS 185
             P+ K K L +++ +   K+ GGL+    +        +  + ST  A M+    +C  
Sbjct: 253 LTPLQK-KCLLYVH-TDPLKSPGGLSICPTSMLSLPDILHRIQFSTPPAGMRLTNERC-- 308

Query: 186 PDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREG 245
                       +LY H L GL  R    L  + F  ++   F+  E  W  L +D+R G
Sbjct: 309 ------------ALYIHALFGLRDRCLGNLG-TIFCSTMFTFFQLLENDWPSLVNDLRHG 355

Query: 246 VLSSRITV-PSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTG 304
            ++  I +  S+RAA+   L+P PE AD + K+   L  +  +   L+P+ + +  + +G
Sbjct: 356 QIAKHIQLEDSVRAALEAELQPEPERADEVEKEF--LKGFDCIARRLWPHLQAIFAVSSG 413

Query: 305 SMEHYLKKLR-HYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQ 363
           +M  Y ++L+  Y   LP++S+ Y S+EG +   +   +    + + +LP+  + EFIP 
Sbjct: 414 AMVVYARRLKDKYTKGLPIISSVYSSTEGTVA--MLHDVKGLDSKYIMLPSEVFCEFIPI 471

Query: 364 RLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV 398
              + +      +P+ +   EV+ G+ YE+ +T V
Sbjct: 472 ENSHED------QPQTLLAEEVEAGQCYELALTTV 500


>gi|440718157|ref|ZP_20898621.1| GH3 auxin-responsive promoter family protein [Rhodopirellula
           baltica SWK14]
 gi|436436699|gb|ELP30419.1| GH3 auxin-responsive promoter family protein [Rhodopirellula
           baltica SWK14]
          Length = 554

 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 89/391 (22%), Positives = 167/391 (42%), Gaps = 26/391 (6%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           ++ + +  + A  IQRE L + +  NA   + ++ G +     E F+  VP+  +E  +P
Sbjct: 16  LQRYLSNAERAREIQRENLLRRIRLNADTAFGRDHGFSEIRTLEDFRRRVPIAGYEAARP 75

Query: 74  YIQRIIDGDISPIL-TGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNR 132
           Y+ R+I G+ + +      +   + +SGTT   PK +P  ++        ++       R
Sbjct: 76  YVDRVIQGETTALFPENTKVVMFATTSGTTD-HPKMIPVTEDFYRQYKAGWQYWGTGVYR 134

Query: 133 EFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKA--MQSQCCSPDEV 189
           ++P + + K+LQF      ++T  G   G         S   AE +   + S    P  V
Sbjct: 135 DYPHLLQMKSLQFSSHWNVTQTPSGAPCGNI-------SGLAAETRPFYIGSLFVLPACV 187

Query: 190 IFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSS 249
           I   +     Y  L   L   + +  + +    +LV   +  + + E L  DI +G L+ 
Sbjct: 188 IQITEHLAKHYTALRLSLAC-DRVGKIVTANPSTLVEVAKFADAMKETLIRDIHDGTLTG 246

Query: 250 RITVP-SIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEH 308
              +P +IR  +   L+PNP  A  + +      + Y    + +P+   L+    GS+  
Sbjct: 247 DQPIPDAIRRQLRSRLRPNPRRARQLQQIVDHTGHLYP--KDAWPDLTLLAVWTGGSVGI 304

Query: 309 YLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNL 368
           YL +L  Y GD+ +      +SEG +   +    P  +  ++      +FEFIP      
Sbjct: 305 YLNQLPEYYGDVAVRDHGLSASEGRMTVPLLNGSPSGMLDYSS----HHFEFIP------ 354

Query: 369 ESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
           ES+     P  +  +++  GE Y I++T  +
Sbjct: 355 ESERDSSTPNVLEASDLTEGENYFIVLTTAS 385


>gi|333993544|ref|YP_004526157.1| GH3 auxin-responsive promoter superfamily [Treponema azotonutricium
           ZAS-9]
 gi|333734794|gb|AEF80743.1| GH3 auxin-responsive promoter superfamily [Treponema azotonutricium
           ZAS-9]
          Length = 566

 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 93/393 (23%), Positives = 168/393 (42%), Gaps = 38/393 (9%)

Query: 21  TKDAERIQRETLRKILEENASAEYLQNLGLNGRTDP-------ESFKSCVPLVTHEDLQP 73
           +K+A R Q +TLR  L       Y +    +   +        E ++  VP+  +E+ +P
Sbjct: 31  SKNAIRSQEQTLRGFLTTARDTVYGKEHHFDTILEATTALDLFERYRKEVPIGDYENFKP 90

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNRE 133
           YI+R   G+ + +  GKP    + +SGTT+ +PK++P  ++  +   ++    + +    
Sbjct: 91  YIERHKHGEANILFPGKP-KMYATTSGTTK-EPKWIPITEQYYQEVYKVMNQLWFY---G 145

Query: 134 FPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEM---KAMQSQCCSPDEVI 190
             + K K     YG   S     +        VY S     +    K M+    +P +V 
Sbjct: 146 MVMNKPKVF---YGKTLSIVGKAIEGAAPDGTVYGSVGGIGQRDIPKFMKVLHTAPADVF 202

Query: 191 FGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSR 250
              D+    Y  +  G+   ++  L+ +    +LV         +++  +DI +G LS +
Sbjct: 203 GITDYKARYYTIMRMGI--EQDCTLIITANPSTLVEMQNNANEFYDDYVEDIEQGTLSQK 260

Query: 251 ITVPS-IRAAMSKILKPNPELADLIHKKCSGLSNWYG-LIP-ELFPNAKYLSGIMTGSME 307
             +   IR A+   LKPNP+ AD    +   L   +G ++P   +PN + ++    G+ E
Sbjct: 261 FPISDEIRKAVEARLKPNPKRAD----ELRALRVRHGNVMPRHYWPNMQAVNTWFCGNTE 316

Query: 308 HYLKKLRH-YAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLG 366
            + KK+R  +          Y S+E   G  +  + P  +    +  N  Y EFI     
Sbjct: 317 VFFKKVRDSFPESCVFHEMGYNSTECRPGIVLKSNCPDTV----IFGNKVYIEFIH---- 368

Query: 367 NLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
             ES++    P+   + EVK G+ Y +IVT  A
Sbjct: 369 --ESELESENPRIYQMYEVKRGQRYCMIVTTSA 399


>gi|2280516|dbj|BAA21614.1| BYJ14 [Nicotiana tabacum]
          Length = 126

 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 54/114 (47%), Positives = 72/114 (63%)

Query: 9   DVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTH 68
           D  + +E  E +T + E +Q   L KIL +NA  EYLQ   LNG TD ESFK  VP++T+
Sbjct: 12  DYKKDLEFIEEVTSNVESVQEMFLLKILSQNAHVEYLQRHNLNGSTDRESFKKVVPVITY 71

Query: 69  EDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQI 122
           ED+QP I RI  GD SPIL  +PI+ IS SSGT+ G+ K +P  +  +   LQ+
Sbjct: 72  EDIQPDITRIAYGDNSPILCSQPISEISSSSGTSGGESKLIPXTEPEIGRXLQL 125


>gi|259014682|gb|ACV88641.1| unknown [Glycine max]
 gi|259014684|gb|ACV88642.1| unknown [Glycine max]
 gi|259014686|gb|ACV88643.1| unknown [Glycine max]
 gi|259014688|gb|ACV88644.1| unknown [Glycine max]
 gi|259014690|gb|ACV88645.1| unknown [Glycine max]
 gi|259014692|gb|ACV88646.1| unknown [Glycine max]
          Length = 142

 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 43/114 (37%), Positives = 61/114 (53%)

Query: 136 IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDF 195
           + KGK L F++   +++T GGL A    T+ Y+S  FK       +   SP+E I   D 
Sbjct: 29  LDKGKGLYFLFVKSETRTPGGLLARPVLTSYYKSDHFKTRPYDPYNVYTSPNEAILCSDS 88

Query: 196 HQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSS 249
            QS+Y  +LCGLI R  +  + + FA  L+ A R  +L W EL  DI  G L+S
Sbjct: 89  FQSMYTQMLCGLIERHHVLRLGAVFASGLLRAIRFLQLNWPELAHDISTGTLNS 142


>gi|449135492|ref|ZP_21770950.1| GH3 auxin-responsive promoter family protein [Rhodopirellula
           europaea 6C]
 gi|448885879|gb|EMB16292.1| GH3 auxin-responsive promoter family protein [Rhodopirellula
           europaea 6C]
          Length = 559

 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 88/391 (22%), Positives = 166/391 (42%), Gaps = 26/391 (6%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           ++ + +  + A  +QRE L   +  NA   + ++ G +     E F+  VP+  +E  +P
Sbjct: 21  LQRYLSNAERARELQRENLLCRIRLNADTAFGRDHGFSEIRTLEDFRRRVPIAGYEAARP 80

Query: 74  YIQRIIDGDISPIL-TGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNR 132
           Y+ R+I G+ + +      +   + +SGTT   PK +P  ++        ++       R
Sbjct: 81  YVDRVIQGETTALFPENTKVVMFATTSGTTD-HPKMIPVTEDFYRQYKAGWQYWGTGVYR 139

Query: 133 EFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKA--MQSQCCSPDEV 189
           ++P + + K+LQF      ++T  G   G         S   AE +   + S    P  V
Sbjct: 140 DYPHLLQMKSLQFSSHWNVTQTPSGAPCGNI-------SGLAAETRPFYIGSLFVLPACV 192

Query: 190 IFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSS 249
           I   +     Y  L   L   + +  + +    +LV   +  + + E L  DI +G L+ 
Sbjct: 193 IQITEHLAKHYTALRLSLAC-DRVGKIVTANPSTLVEVAKFADAMKETLIRDIHDGTLTG 251

Query: 250 RITVP-SIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEH 308
              +P +IR  +   L+PNP  A  + +      + Y    + +P+   L+    GS+  
Sbjct: 252 NQPIPDAIRQQLRSRLRPNPRRARQLQQIVDRTGHLYP--KDAWPDLTLLAVWTGGSVGL 309

Query: 309 YLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNL 368
           YL +L  Y GD+ +      +SEG +   +    P  +  ++      +FEFIP      
Sbjct: 310 YLNQLPEYYGDVAVRDHGLSASEGRMTVPLQNGSPSGMLDYSS----HHFEFIP------ 359

Query: 369 ESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
           ES+     P  +  +++  GE Y I++T  +
Sbjct: 360 ESERDSSTPNVLEASDLTEGENYFIVLTTAS 390


>gi|168701342|ref|ZP_02733619.1| probable auxin-responsive-like protein [Gemmata obscuriglobus UQM
           2246]
          Length = 564

 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 93/408 (22%), Positives = 176/408 (43%), Gaps = 39/408 (9%)

Query: 2   LEKMETVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKS 61
           L ++ T  V   + +FE   ++ E +Q E LR I+ + A  ++ ++           F++
Sbjct: 11  LGRLLTYPVRRQLRQFEVACQNPEAVQTELLRDIIRKQADTQFGRDHKFGTVRAVADFRA 70

Query: 62  CVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMET--- 118
            VP+  +E + PYI+++ +GD   +L  K +   + +SGTT  + K +P  D  +     
Sbjct: 71  NVPVAPYEYVSPYIEKVQNGDTRALLADKRVLMFALTSGTTASR-KLIPVTDAYLAAYRR 129

Query: 119 -----TLQIFRTSYAFRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFK 173
                 ++++R +   R    PI     +Q     ++ +T  G   G  +   Y +   K
Sbjct: 130 GWNMWGVKMYRDNRGRRIAMRPI-----VQLGGDPEEFRTPAGTPCGNLSG--YTAMVQK 182

Query: 174 AEMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFEL 233
             +K M +      ++    D     Y  L    + R   QL+ +    +LV   RT + 
Sbjct: 183 RIIKRMYAVPYVTGKI---KDARARYYVALRFS-VGRNVSQLMAAN-PSTLVQLARTLDA 237

Query: 234 VWEELCDDIREGVLSSRITVPS-IRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELF 292
             E L  D++ G L + + +P+ +RA +   +  +   A  +    S +   Y    +++
Sbjct: 238 EKEHLLRDLQNGTLRADLDIPADVRAYLEPRVSRDAARARELSAVASKMGRLY--PQDVW 295

Query: 293 PNAKYLSGIMT-GSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAV 351
           P    +    T GSM  YL++L  Y G  P+      +SEG        ++P    T + 
Sbjct: 296 PTEGTVINTWTGGSMGPYLRQLPQYYGTPPVHDLGLLASEGRF------TIPLSGGTASG 349

Query: 352 LPNIG--YFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN 397
           + +I   YFEF+P      E+++    P  +G  E++ G+ Y I+ T 
Sbjct: 350 VLDIWSHYFEFVP------EAEMESARPTVLGAHELQEGKSYFILPTT 391


>gi|413949769|gb|AFW82418.1| hypothetical protein ZEAMMB73_006681 [Zea mays]
          Length = 111

 Score = 80.9 bits (198), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 40/83 (48%), Positives = 57/83 (68%), Gaps = 2/83 (2%)

Query: 12  ELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDP--ESFKSCVPLVTHE 69
           +L+E  E +T  A ++QR  L +IL +NA AEYL+ LG++G      E+F+   PLVT+E
Sbjct: 23  DLLEYIERVTAGAAQVQRRVLSEILAQNAPAEYLRRLGVSGAAPGAVEAFRRAAPLVTYE 82

Query: 70  DLQPYIQRIIDGDISPILTGKPI 92
           D+ P + RI +GD SPIL+GKPI
Sbjct: 83  DILPDVLRIANGDTSPILSGKPI 105


>gi|428226503|ref|YP_007110600.1| GH3 auxin-responsive promoter [Geitlerinema sp. PCC 7407]
 gi|427986404|gb|AFY67548.1| GH3 auxin-responsive promoter [Geitlerinema sp. PCC 7407]
          Length = 562

 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 99/404 (24%), Positives = 164/404 (40%), Gaps = 72/404 (17%)

Query: 21  TKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIID 80
           T+  E  Q   L ++L    + E  +  GL+     + F+  VP+  +   Q Y +R  +
Sbjct: 24  TRQPEAAQERFLMELLRVQQTTELGRKFGLSDIKTIDQFREQVPIWPYSTYQAYTERAFN 83

Query: 81  GDISPILTGKPITTISRSSGTTQGKPKFLP----FNDELMETTLQ---IFRTSYAFRNRE 133
           G+ + +LT  PI   + +SG+T G  K +P    F + L    L          A R R 
Sbjct: 84  GEPN-VLTADPIAYFNLTSGST-GVQKLIPVTKRFQNSLKRANLASIGFLADGLAARGRS 141

Query: 134 FPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQC-CSPDEVIFG 192
           F    G+ L         +T  G++ G A+  V R        K + SQ    P E +  
Sbjct: 142 F----GRVLTTNSVQLLGQTPTGIDYGHASVGVLRMG------KLLYSQLFAHPFETLLP 191

Query: 193 PDFHQSLYCHLLCGLIFREEIQL--VFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSR 250
            D   S+  H +C L    + Q+  + + F   ++      E   ++L  DI +G L+S 
Sbjct: 192 GD---SVTRHYVCLLFALRDRQMRGLLANFPMLVLRTCGYLEEYADQLIRDIEKGELASW 248

Query: 251 ITV-PSIRAAMSKILKPNP----ELADLIHK--KCSGLSNWYGLIPELFPNAKYLSGIMT 303
           + + P +R  + K   P+P    EL   I +  + + ++ W        P   ++     
Sbjct: 249 LDLSPELRQQLEKRCVPDPVRAQELRVAIQRDGRLTPVAAW--------PQLAFVGTARG 300

Query: 304 GSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNI-------- 355
           G+ + Y ++   Y GD P+  A Y S+E               ATF+V P++        
Sbjct: 301 GTSDFYFERFLAYFGDTPVFGAVYSSAE---------------ATFSVYPDVDTDGSVLA 345

Query: 356 ---GYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVT 396
              G+FEFI         Q     PK +  TEV+VG  Y ++ T
Sbjct: 346 LESGFFEFIA------PDQWEEAHPKTLLPTEVQVGGYYRLLTT 383


>gi|381181294|ref|ZP_09890129.1| GH3 auxin-responsive promoter [Treponema saccharophilum DSM 2985]
 gi|380766961|gb|EIC00965.1| GH3 auxin-responsive promoter [Treponema saccharophilum DSM 2985]
          Length = 565

 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 96/415 (23%), Positives = 188/415 (45%), Gaps = 43/415 (10%)

Query: 13  LIEEFETITKDAERIQRETLRKILEENASAEYLQNLG----LNGRTDPESFK---SCVPL 65
           L + F   ++D        LR+ILE    +E+ +  G    L    D E F+   + VP+
Sbjct: 22  LYKRFVESSRDCRASSASALRRILEYAKDSEWGRAHGFPLILLAEDDDELFRLFRANVPV 81

Query: 66  VTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRT 125
             +++L+P+I+R  +G+ + +  G P    S +SGT+ G+PK++P ++   +   +    
Sbjct: 82  SDYDELRPFIERCKNGEPNVLFPGHP-KMYSVTSGTS-GEPKWIPVSEAYHDVVYKKMTV 139

Query: 126 SYAFRNREF-PIG-KGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQC 183
            + +   +  P    GKA+  +      +   G   G+ +    R   +   +  + S C
Sbjct: 140 LWLYSLLKLCPAAFDGKAVSVVGSVVDGEVPDGTVFGSVSGLTSRDIPWF--LSGIHSVC 197

Query: 184 CSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIR 243
              ++V    DF+   Y  +  G+   +++  + +    +++      +   ++   DI 
Sbjct: 198 ---EDVFKIDDFNARYYAIMRIGI--EQDVTALITANPSTIMEMQNVVDSHLDDFIRDIE 252

Query: 244 EGVLSSRITVP-SIRAAMSKILKPNPELADLIHKKCSGLSNWYG-LIP-ELFPNAKYLSG 300
            G L     +P  IRA +S  L PN   A+ + +    L   YG L P + +PN   +S 
Sbjct: 253 NGTLCDMAEIPGDIRARLSCALSPNVRRANELRE----LRKKYGRLFPKDFWPNLAVVST 308

Query: 301 IMTGSMEHYLKKLRHYAGDLPL-MSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFE 359
             TG+   Y +K++ Y  +  + +   Y ++E   G  ++ S      T  + P + +FE
Sbjct: 309 WKTGNSGMYAEKIKDYFPEKAIHIDLSYFATECRAGITLDGS-----DTTVLFPGVHFFE 363

Query: 360 FIPQR-LGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVAVAGSLFSRIPICGL 413
           F+P++ +G  E Q+L       G+ E++ G++Y + VT +   G L+ R P+  L
Sbjct: 364 FVPEKDIGKKEPQIL-------GIDEIEDGKQYSVYVTTL---GGLY-RYPMNDL 407


>gi|149178349|ref|ZP_01856940.1| probable auxin-responsive-like protein [Planctomyces maris DSM
           8797]
 gi|148842767|gb|EDL57139.1| probable auxin-responsive-like protein [Planctomyces maris DSM
           8797]
          Length = 561

 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 95/392 (24%), Positives = 170/392 (43%), Gaps = 37/392 (9%)

Query: 17  FETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQ 76
           F   T     +Q++TL++IL  NA +++ +   L+G    E F++  P+  +E  +P+I 
Sbjct: 26  FLAHTSRCREVQQQTLQRILHLNADSDFSRKWQLDGSCTIEDFQTRFPVSDYERFRPWID 85

Query: 77  RIIDGDISPIL-TGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP 135
           R+  G+ + +L     +   + SSGTT    KF+P  +  ++   Q ++        +FP
Sbjct: 86  RVKTGETTALLGAANRLLMFTLSSGTT-ADSKFIPITEPFLKDYRQGWQNWGILTYDDFP 144

Query: 136 IGKGKAL-QFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCS-----PDEV 189
             K + + Q      + +T GG   G  +  V           AMQS         P EV
Sbjct: 145 RLKYQNIVQLSSNFDKFRTPGGTPCGNISGLV----------AAMQSPVVKLLYTVPGEV 194

Query: 190 IFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSS 249
               D H   Y  L   +  R E+ ++ +    +L+H  +  +   E L  DI +G L+ 
Sbjct: 195 SQIEDPHLKYYTALRLAIADR-EVGMITTANPSTLLHLAQFADQQRESLIRDIADGRLTG 253

Query: 250 RITV-PSI-RAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSME 307
              + P+I R   SK+ + N   A  +    +   + Y    + +P    L+  M GS  
Sbjct: 254 AAQLEPAILRILQSKLKRKNRARARELEHIVARTGHLYPR--DFWPGLSLLAVWMGGSAG 311

Query: 308 HYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIG--YFEFIPQRL 365
            YL +L  + G  P+      +SEG +      ++P E  T   + +I   +FEF+P+  
Sbjct: 312 AYLSQLAPFYGTPPVRDHGLSASEGRM------TIPLESGTSTGVLDITSHFFEFVPEDE 365

Query: 366 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN 397
             L S  +      +   +++VG+ Y I++T 
Sbjct: 366 DPLTSTNI------LTADQLEVGQNYFILLTT 391


>gi|358345211|ref|XP_003636675.1| Indole-3-acetic acid-amido synthetase GH3.6 [Medicago truncatula]
 gi|355502610|gb|AES83813.1| Indole-3-acetic acid-amido synthetase GH3.6 [Medicago truncatula]
          Length = 139

 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/77 (51%), Positives = 51/77 (66%)

Query: 17  FETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQ 76
            E +T +A  IQ   L +IL  +A  EYLQ  GLNGR D ++FK  VP+VT+EDL+  I 
Sbjct: 36  IEDVTMNANEIQERVLAEILSSSALVEYLQRHGLNGRRDRKTFKKVVPVVTYEDLKVDID 95

Query: 77  RIIDGDISPILTGKPIT 93
           RI +GD SPIL  KPI+
Sbjct: 96  RIANGDASPILCSKPIS 112


>gi|430746879|ref|YP_007206008.1| GH3 auxin-responsive promoter-binding protein [Singulisphaera
           acidiphila DSM 18658]
 gi|430018599|gb|AGA30313.1| GH3 auxin-responsive promoter-binding protein [Singulisphaera
           acidiphila DSM 18658]
          Length = 568

 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 96/408 (23%), Positives = 178/408 (43%), Gaps = 46/408 (11%)

Query: 13  LIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQ 72
           L  +F + T  A+ +QR+ L   +  +A +++ ++   +    P  F+  VP+  ++ ++
Sbjct: 20  LARQFLSQTSCADEVQRDLLMSRIARHADSQFGRDHHFHEIRTPADFRRRVPIRGYDAME 79

Query: 73  PYIQRIIDGDISPIL-TGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSY---- 127
           PYI R+  GD+  +  +G  +   + +SGTT  +PK +P   E    +L  +R  +    
Sbjct: 80  PYIDRVRQGDLGALFGSGTKVLMFAMTSGTTN-RPKTIPVTQE----SLADYREGWTIWG 134

Query: 128 --AFRNREFPIGKG--KALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQC 183
             AF      + +G    LQ     ++S T  G+  G  T       T   +   ++   
Sbjct: 135 ILAFDAHPRILSRGLLPILQIASDWRESVTPSGIPCGAIT-----GLTAHMQNPLIRLTY 189

Query: 184 CSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIR 243
           C P       D     Y  L    +FR  +    +    +++   R  +     L  D+ 
Sbjct: 190 CMPAIASRIKDIESKYYVALRLS-VFR-NLGTTIAANPSTILAIARLGDREKATLIRDLA 247

Query: 244 EGVLSSRITVP-SIRAAM-SKILKPNPELADLIHKKCSGLSNWYG-LIP-ELFPNAKYLS 299
           +G +  +  +P  +R A+  K+ + + + A    ++   + N  G L+P + +P+  +L+
Sbjct: 248 DGTIDPKWDLPVEVREALRRKVGRKHKQAA----RRLEAIVNQTGRLLPKDYWPDLCFLA 303

Query: 300 GIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNI--GY 357
               G+M  YL+    Y GD P+      +SEG +      ++P E  T A + +I   Y
Sbjct: 304 NWTGGTMGAYLRNYPEYFGDRPVRDVGLIASEGRM------TIPIEDGTPAGVLDIRHHY 357

Query: 358 FEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVAVAGSLF 405
           FEFIP+   N E+      P+ V   E+  G+ Y I+ T    AG L+
Sbjct: 358 FEFIPEDQANHEA------PETVEAHELIEGQRYFILPT---TAGGLY 396


>gi|390952274|ref|YP_006416033.1| GH3 auxin-responsive promoter-binding protein [Thiocystis
           violascens DSM 198]
 gi|390428843|gb|AFL75908.1| GH3 auxin-responsive promoter-binding protein [Thiocystis
           violascens DSM 198]
          Length = 547

 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 94/396 (23%), Positives = 163/396 (41%), Gaps = 39/396 (9%)

Query: 13  LIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQ 72
           L + F  + + A+ +Q+E L  ++  NA + + +  G       + F+  +PL    D++
Sbjct: 15  LWQSFAALCERADAVQQEFLLDLIRSNADSRFGREHGFERIASVDDFRRRIPLRDWNDVE 74

Query: 73  PYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNR 132
           PY+  ++ G+   + +G+P+     +SGTT G PK +P ND   E              R
Sbjct: 75  PYVTALVAGETEALTSGQPVARFIMTSGTT-GTPKLIPANDATQEVNGVTMALRLLGVLR 133

Query: 133 EFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIF 191
           + P + +G  L     +   +T  G+  G+A+      S  +A  + ++ +   P  V+ 
Sbjct: 134 DHPEVLRGDILALANAAVAGQTASGIPYGSASG----MSMTRAPAE-LRQRFAYPPAVLE 188

Query: 192 GPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRI 251
             D    +Y  L   L    ++ L       +    F         L  DI  G LS+  
Sbjct: 189 IKDPASRVYAMLRFAL--ERDLTLAIGNNPLNFTQLFDLLPTHAAALIADIESGTLSTPE 246

Query: 252 TVPSI-RAAMSKILKPNPELADLIH--KKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEH 308
            +  + R  +   L+PN E A  +      S  + W        PN + +    TG M  
Sbjct: 247 PLSDVLRQRLEAELRPNSERAAALRALDVLSARAAW--------PNLRLIVCWKTGLMGR 298

Query: 309 YLKKL--RHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFA-VLPNIG-YFEFIPQR 364
           +L  L  R   G +      YG+SEG +      ++P    T A VL   G +FEF+P+ 
Sbjct: 299 FLNDLAERCPPGTV-FREYGYGASEGLL------TIPMSDETSAGVLAIHGIFFEFLPE- 350

Query: 365 LGNLESQVLCIEPKPVGLT-EVKVGEEYEIIVTNVA 399
                 +       P  L  E++VG+ Y++I+T  A
Sbjct: 351 ------EATQTPDAPTLLAHELEVGQRYQLILTTAA 380


>gi|333999214|ref|YP_004531826.1| GH3 auxin-responsive promoter superfamily [Treponema primitia
           ZAS-2]
 gi|333739609|gb|AEF85099.1| GH3 auxin-responsive promoter superfamily [Treponema primitia
           ZAS-2]
          Length = 567

 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 99/401 (24%), Positives = 163/401 (40%), Gaps = 40/401 (9%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLG----LNGRTDPESFK---SCVPLV 66
           ++E    +KD ++ Q  TLR IL+ +    Y +       L   T  E FK   + VP  
Sbjct: 24  LKELTKASKDGKKAQDGTLRHILDLSKDTVYGKEHHFDEILKADTADELFKRYQNYVPAN 83

Query: 67  THEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTS 126
            +EDLQPYI+R   G+   +  GKP    + +SGTT+ +PK++P        T   +R  
Sbjct: 84  NYEDLQPYIERHKQGEAGILFPGKP-KLYATTSGTTK-EPKWIP-------VTETYYREV 134

Query: 127 YAFRNR-EFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEM---KAMQSQ 182
           Y   N+  F +   +     YG   S     +        VY S +   +    K M   
Sbjct: 135 YKGMNQLWFYLMMREKPHVWYGPSASLVGKSIEGAAPDGTVYGSLSGIMQRDIPKFMHVL 194

Query: 183 CCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDI 242
             +P EV    D+    Y   +  +     +  + +    +LV         ++E   D+
Sbjct: 195 HTAPAEVFHIADYKARYYA--IMRMAIGRNVHCIITANPSTLVEMQTNANEFYDEYVKDV 252

Query: 243 REGVLSSRITVP-SIRAAMSKILKPNPELADLIHKKCSGLSNWYGLI--PELFPNAKYLS 299
            +G LS   T+P  IR+A+   L PNP  A     +   L   YG +     +P  + + 
Sbjct: 253 EQGTLSRLFTIPEEIRSAIEAKLTPNPGRA----AELRALKAKYGKVLPKHYWPELQTIC 308

Query: 300 GIMTGSMEHYLKKLRH-YAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYF 358
               G+ + Y  K++  +          Y S+E   G  +  + P  +    V  +  YF
Sbjct: 309 VWFCGNTQVYFNKIKDSFPTTTVFHEFSYMSTECKAGLVLKSNSPDTV----VFGHKIYF 364

Query: 359 EFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
           EFI       ES++    P+   + EV+ G+ Y ++VT  A
Sbjct: 365 EFIH------ESEMDNPNPRIYQIYEVEKGQRYCMLVTTSA 399


>gi|390342188|ref|XP_003725609.1| PREDICTED: putative indole-3-acetic acid-amido synthetase
           GH3.9-like [Strongylocentrotus purpuratus]
          Length = 351

 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/294 (24%), Positives = 132/294 (44%), Gaps = 18/294 (6%)

Query: 13  LIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQ 72
           L+ +F    K     Q   L  IL +N    Y ++ GL    + + F+S  PL  ++  +
Sbjct: 30  LLPKFRETLKRPGYYQERILLGILRDNKDTAYGKDYGLVSMRNIKDFRSKHPLTKYDHYR 89

Query: 73  PYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNR 132
           PY+QR++DG+ S +   +P  + +R+SGTT G+PK+ P  D      + I          
Sbjct: 90  PYVQRMMDGEGSVLTAVRP-KSFTRTSGTT-GQPKYFPIVDR-QGILMDISAVVTGLLQE 146

Query: 133 EFPIGK--GKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVI 190
            FP+     K LQ+      S++K G+   +A        T  A+   + S   +P    
Sbjct: 147 AFPVLGPLQKRLQYYVHPVISRSKAGVPIESAL-------TIPADNALLMSIFNTPPAGF 199

Query: 191 FGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSR 250
                +++ Y HLL  L   + I ++ S F              W+++ +DI  G + S 
Sbjct: 200 TILTAYEATYIHLLFAL-RDKSIGIIASNFVTFFETMLVQLGNCWQDIVEDIEHGTILSS 258

Query: 251 ITVPS-IRAAMSKIL--KPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGI 301
           + + + IR  +S+ L  K +P  A+ + K+      +  ++P ++P+ K + G+
Sbjct: 259 LNLDAGIREQLSRELEGKGDPIRAEELRKEFK--KGFEHIVPRVWPHVKVIMGV 310


>gi|333999457|ref|YP_004532069.1| GH3 auxin-responsive promoter superfamily [Treponema primitia
           ZAS-2]
 gi|333739579|gb|AEF85069.1| GH3 auxin-responsive promoter superfamily [Treponema primitia
           ZAS-2]
          Length = 566

 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 96/400 (24%), Positives = 166/400 (41%), Gaps = 38/400 (9%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQN------LGLNGRTDP-ESFKSCVPLV 66
           I E    +K+A + Q +TLR  L       Y +       L  +G  D  E ++  VP+ 
Sbjct: 24  IGELMKSSKNAIKAQEQTLRGFLTAAKDTVYGKEHRFDTILEASGAQDLFERYRKQVPIN 83

Query: 67  THEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRT- 125
            +E+ +PYI+R   G+   +L GKP    + +SGTT+ +PK++P  ++  +   ++    
Sbjct: 84  DYENFRPYIERHKLGEADVLLPGKP-KMYATTSGTTK-EPKWVPITEQYYQEVYKVMNQL 141

Query: 126 -SYAFRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCC 184
             YA    +  +  GK L  +  + +     G   G+ +    R       MKA+     
Sbjct: 142 WFYAMIMNKPKVFYGKMLSIVGKAIEGAAPDGTVYGSISGISQRD--MPNFMKALH---I 196

Query: 185 SPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIRE 244
           +P ++   PD+    Y  +  G+   ++   + +    +LV         ++E   DI +
Sbjct: 197 APADIFSIPDYKARYYALMRFGI--EQDCTSIVTANPSTLVEMQSNANEFYDEYVVDIEQ 254

Query: 245 GVLSSRITVPS-IRAAMSKILKPNPELADLIHKKCSGLSNWYG--LIPELFPNAKYLSGI 301
           G LS +  +P  IR  +   LKPNPE A  + +    L   YG  L    +PN + ++  
Sbjct: 255 GTLSRKFPIPDEIRTVLEACLKPNPERAAELRQ----LKVRYGSVLPKHYWPNMQVVNVW 310

Query: 302 MTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPS--LPPELATFAVLPNIGYFE 359
             G+   + +K+R    +  +         G+      P   L        +  +  Y E
Sbjct: 311 FCGNTHVFFEKVRDSFPETCVF-----HEFGYFATECRPGIVLKSNTQDTVIFGHKVYLE 365

Query: 360 FIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
           FI       ES++    P    + EVK GE Y +IVT  A
Sbjct: 366 FIH------ESELESENPHIYQMYEVKRGERYCMIVTTSA 399


>gi|390565964|ref|ZP_10246513.1| putative GH3 auxin-responsive promoter family protein
           [Nitrolancetus hollandicus Lb]
 gi|390170789|emb|CCF85856.1| putative GH3 auxin-responsive promoter family protein
           [Nitrolancetus hollandicus Lb]
          Length = 561

 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 82/327 (25%), Positives = 141/327 (43%), Gaps = 29/327 (8%)

Query: 15  EEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPY 74
           + FE  ++     Q+E L +I+  N   EY            E F+S VP+ T+E L PY
Sbjct: 21  DAFEQASRQPVIAQQEKLLEIIRRNRDTEYGTEHRFAKICSVEDFQSSVPINTYETLTPY 80

Query: 75  IQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDE-LMETTLQIFRTSYAFRNRE 133
           I+R + G I  +LT       + +SGTT G+ K++P     L E +  +   +Y      
Sbjct: 81  IERTLRG-IPNVLTADKPLMFATTSGTT-GRAKYIPVTPSYLHEYSHGVHVHTYRMLADY 138

Query: 134 FPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSS-TFKAEMKAMQSQCCSPDEVIFG 192
             + +GKAL       +  T+ GL  G  +  + R+  +F     A+  + C+  +V   
Sbjct: 139 DNVFEGKALVSASSDVEGYTESGLPYGAISGYLTRTQPSFIRRFYALPYEICTIKQV--- 195

Query: 193 PDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRIT 252
                 L  +L+      E+++L+      SL+   +      EEL  DIR G ++    
Sbjct: 196 -----DLKYYLMLRAALTEDVRLLIMPNPSSLLLLAQKMASYAEELIHDIRMGSVNPPFP 250

Query: 253 VPSIRAAMSKILKPNPELADLIHK-----KCSGLSNWYG-LIP-ELFPNAKYLSGIMTGS 305
           +            P P LA L        + + + N  G L+P +++P    +S    G+
Sbjct: 251 LE----------HPAPRLAGLHSDPGRAAELTAILNERGRLLPSDVWPRLTLISCWKGGT 300

Query: 306 MEHYLKKLRHYAGDLPLMSADYGSSEG 332
           M  YL++L  + G+ P+    Y ++EG
Sbjct: 301 MPLYLRRLPEFFGNCPVRDLGYMATEG 327


>gi|390339113|ref|XP_003724932.1| PREDICTED: probable indole-3-acetic acid-amido synthetase
           GH3.4-like [Strongylocentrotus purpuratus]
          Length = 489

 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 106/207 (51%), Gaps = 18/207 (8%)

Query: 194 DFHQSLYCHLLCGLIFRE-EIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRIT 252
           D + +LY HLL GL  R+  ++ +   F  +++ A +  E  W +   DI  G +S+   
Sbjct: 110 DPNDALYVHLLFGL--RDPNVRSICCNFTSTVMSAMQLIEKRWPDFVRDIEIGTVSTNNV 167

Query: 253 VPSIRAAMSKIL-KPNPE-LADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYL 310
            P I   + + + + +PE  ADL      G     G++  ++P  K++    + S+    
Sbjct: 168 PPEIHQVLVREMGEGDPERAADLKRDFEKGFE---GILRRVWPCLKFVQA--SDSVGIKQ 222

Query: 311 KKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLES 370
           K L+ Y   +PL S   G++EG IG N+ P    E   F ++P++G FEFIP      E+
Sbjct: 223 KLLKSYLKGVPLFSRSLGATEGIIGINLWPL--QEKDEFVLMPSLGVFEFIP------EN 274

Query: 371 QVLCIEPKPVGLTEVKVGEEYEIIVTN 397
           ++   +PK + + E++VG  YEI++T 
Sbjct: 275 EMHDDQPKTLFIDELEVGGVYEILITQ 301


>gi|390368075|ref|XP_003731385.1| PREDICTED: probable indole-3-acetic acid-amido synthetase
           GH3.5-like, partial [Strongylocentrotus purpuratus]
          Length = 331

 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 81/324 (25%), Positives = 145/324 (44%), Gaps = 39/324 (12%)

Query: 86  ILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFR------TSYAFRNREFPIGKG 139
           +LT +     + +SGTT GK K  P+    +  + +I        T   F  R       
Sbjct: 8   VLTSEAPMRFALTSGTT-GKAKMWPYLKSYISDSYKIMYGLVSAITFKTFNERSL----- 61

Query: 140 KALQ---FIYGSKQSK-TKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDF 195
             LQ   ++Y + +++ T+GG+  G         S     MK       +P E  F    
Sbjct: 62  --LQQDIWLYTAPKTRFTEGGILMGPG-------SLIAPWMKKFLLIFSTPGEGFFISRP 112

Query: 196 HQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPS 255
            ++ Y HLL GL  R  +  + + F  +L+ A R  E  W+++  DI  G +S       
Sbjct: 113 FEATYIHLLFGLRDRN-LGGIMANFTSNLMSAMRQLEHCWQDIVRDIEHGTISYLNLESD 171

Query: 256 IRAAMSKILKP-NPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLR 314
           ++   SK L   +PE A  +  +      + G+I  ++P+  Y++ + +  ++  L  L 
Sbjct: 172 VQKKFSKSLGSGDPERAAELKTEFE--KGFDGIIRRVWPHIHYINAVDSAGLKGVL--LD 227

Query: 315 HYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLC 374
            YA  +P+ +   G++EG +G N+  +   +   F +LP    FEFIP+   N+E +   
Sbjct: 228 TYAKGVPMYAPGLGATEGMMGINLWITSGKD--EFVLLPGYTVFEFIPEE--NMEDET-- 281

Query: 375 IEPKPVGLTEVKVGEEYEIIVTNV 398
             P+ + L E+ +   YEI++T +
Sbjct: 282 --PETLFLDELTIDGVYEIVITQL 303


>gi|345871020|ref|ZP_08822969.1| alpha-L-glutamate ligase, RimK family [Thiorhodococcus drewsii AZ1]
 gi|343921174|gb|EGV31898.1| alpha-L-glutamate ligase, RimK family [Thiorhodococcus drewsii AZ1]
          Length = 860

 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 96/393 (24%), Positives = 165/393 (41%), Gaps = 36/393 (9%)

Query: 12  ELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDL 71
           EL++ F       E  Q+  L  IL + A  EY +  G       ++F+  VP+    D 
Sbjct: 327 ELVQTFIGACSLVEETQQRVLLDILRQGAQTEYGRANGFEAIDSIDAFRQAVPVSQWADF 386

Query: 72  QPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFN--DELMETTLQIFRTSYAF 129
           +PY QR+  G+   + +G+P   IS +SGTT G  K +P +   EL ++ +   RT  A 
Sbjct: 387 EPYAQRMELGEGDLLFSGQPTHFIS-TSGTT-GHFKNIPESAAGELAKSLVSRART--AL 442

Query: 130 RNREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDE 188
             +  P +  G  +     +   +T GG+  G A+       T       ++ +   P E
Sbjct: 443 LMKMMPDLLDGYFIPLSNVAVMGETAGGIPFGYAS-----GLTLAGAPPEIRRRLAFPPE 497

Query: 189 VIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLS 248
           V+   D     Y  +   +  +  ++L+       +       +   +E+  DI  G LS
Sbjct: 498 VLGATDAATLDYLTMRFAMA-QPLVRLLVGNNPGRMTALLEAADRRRDEIITDIERGTLS 556

Query: 249 SRITVPS-IRAAMSKILKPNPELADLIHKKCSGLSNWYGLIP-ELFPNAKYLSGIMTGSM 306
             + + + +R  +   L P+PE A  +    +G      L P + +P  K +S  + G++
Sbjct: 557 QDLELDAELRRQLEGYLSPDPERAAALRSMLAGRGR---LEPRDYWPGLKMISCWLGGTI 613

Query: 307 EHYLKKLRHY-AGDLPLMSADYGSSEGWIGANVNPSLPPE-LATFAVLPNIGYFEFIPQR 364
             YL+ L  +   ++      YG+SEG     + P  P   LA F       +FEF P  
Sbjct: 614 GRYLEGLIPWLPENVIFTDCGYGASEGKFNVPMRPGAPEAPLAIFGY-----FFEFQPLA 668

Query: 365 LGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN 397
            G           +P+   E++ G EY +IVT+
Sbjct: 669 GG-----------EPLLAHELEDGAEYGLIVTS 690


>gi|381158026|ref|ZP_09867259.1| GH3 auxin-responsive promoter-binding protein [Thiorhodovibrio sp.
           970]
 gi|380879384|gb|EIC21475.1| GH3 auxin-responsive promoter-binding protein [Thiorhodovibrio sp.
           970]
          Length = 548

 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 89/397 (22%), Positives = 159/397 (40%), Gaps = 41/397 (10%)

Query: 13  LIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQ 72
           L   F  +    + +Q   L +++ +NA + + +  G         F+  VPL     ++
Sbjct: 15  LWRRFAALCDRTKAVQERLLLELVSQNADSRFGREHGFARIASIADFRRQVPLRDWTGIE 74

Query: 73  PYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNR 132
           PY+  +++G+   +   +P++    +SGTT G PK +P N                   +
Sbjct: 75  PYVTALVEGEADALTHAQPVSRFVMTSGTT-GTPKLIPANAASQTANGVTMALRLLGVLQ 133

Query: 133 EFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIF 191
           + P + +G  L         +T  G+  G+A+       T       +Q +   P  V+ 
Sbjct: 134 DHPEVLQGGILALANAPVAGQTAQGVPYGSAS-----GMTMTRAPAELQRRFAYPPAVLE 188

Query: 192 GPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRI 251
             D    +Y  L   L    +++L       +    F    +  + L  DI  G +S   
Sbjct: 189 IEDQASRVYAMLRFAL--EHDLRLAVGNNPLNFTQLFDLLPVHADALIADIASGSISPPT 246

Query: 252 TVP-SIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYL 310
            +P  +R  +   L+PNPE A+ + ++  GL+         +PN + +    TG M  +L
Sbjct: 247 PLPEEVRQRLQAPLRPNPERAERL-RQLEGLTARAA-----WPNLRLIVCWKTGLMGRFL 300

Query: 311 KKLRHYA-GDLPLMSADYGSSEGWIGANV-NPSLPPELATFAVLPNIGYFEFIPQRLGNL 368
             L      D       YG+SEG +   V + S    LA  A+     +FEF+P+     
Sbjct: 301 ADLAERCPPDTQFREYGYGASEGLLTIPVSDTSSAGALAIHAM-----FFEFLPE----- 350

Query: 369 ESQVLCIEP-----KPVGLT-EVKVGEEYEIIVTNVA 399
                  EP      P  L  E++VG+ Y++++TN A
Sbjct: 351 -------EPPQTPDAPTLLAHELEVGQCYQLVLTNAA 380


>gi|381158029|ref|ZP_09867262.1| GH3 auxin-responsive promoter-binding protein [Thiorhodovibrio sp.
           970]
 gi|380879387|gb|EIC21478.1| GH3 auxin-responsive promoter-binding protein [Thiorhodovibrio sp.
           970]
          Length = 560

 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 78/321 (24%), Positives = 135/321 (42%), Gaps = 22/321 (6%)

Query: 22  KDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDG 81
           +D    Q   L + LE NA   + +         P  F   VP+ + E + PY+ RII G
Sbjct: 25  RDLRASQCRLLEERLERNADTVFGREHDFKRLKSPADFARAVPVSSWETVDPYVDRIIAG 84

Query: 82  DISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFPIGKGKA 141
           + + ILT  P+  +   +  T GKPK +P   E  +    + +  +AF   E      + 
Sbjct: 85  ETN-ILTLGPLPAMFNKTSGTTGKPKLIPVTAESTKGN-SLNQKIWAFAAIE------RH 136

Query: 142 LQFIYGSKQSKTKGGLNAGTATTNVYRSST----FKAEMKAMQSQCCSPDEVIFGPDFHQ 197
            +F+ G         +   T TTN+   +      +      +++   P + +   DF  
Sbjct: 137 PRFLGGKVFPVVNKAIEGYTQTTNIPYGAVSGLMVRDAHPLARAKLAYPYDAVEIEDFTA 196

Query: 198 SLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPS-I 256
             Y  + C +     +  +  +  ++L+  F + +    EL  DI +G LS    +P  I
Sbjct: 197 RRYAMMRCAV--PRSVTFIPGSNPNALLKLFESADERKTELFRDIHDGTLSKNFDIPGPI 254

Query: 257 RAAMSKILKPNPELADLIHKKCSGLSNWYG-LIP-ELFPNAKYLSGIMTGSMEHYLKKLR 314
           RA +SK LKP P  A    ++   L+   G L P + +P+ K +     G++  +   L+
Sbjct: 255 RATLSKNLKPEPAKA----RELERLAGRAGRLRPRDYWPDLKLIGCWKGGTVGQFAHHLQ 310

Query: 315 HY-AGDLPLMSADYGSSEGWI 334
            + A  L L  + Y +SE  I
Sbjct: 311 DWCAPGLTLRDSGYMASEAHI 331


>gi|48843779|gb|AAT47038.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 254

 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/82 (45%), Positives = 51/82 (62%)

Query: 12  ELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDL 71
           E +E  E +T+    +Q   L  IL  N   EYL+  G+ GRTD E FK+ VP+VT+EDL
Sbjct: 102 EKLEFIEEMTRGFYAVQERVLAAILARNNGTEYLRRHGMEGRTDREVFKARVPIVTYEDL 161

Query: 72  QPYIQRIIDGDISPILTGKPIT 93
           +P I+R  +GD S I++  PIT
Sbjct: 162 RPEIERTANGDRSNIISSHPIT 183


>gi|333995139|ref|YP_004527752.1| GH3 auxin-responsive promoter superfamily [Treponema azotonutricium
           ZAS-9]
 gi|333737534|gb|AEF83483.1| GH3 auxin-responsive promoter superfamily [Treponema azotonutricium
           ZAS-9]
          Length = 569

 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 94/396 (23%), Positives = 170/396 (42%), Gaps = 36/396 (9%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEY--LQNLG--LNGRTDPESFKSCVPLVT-- 67
           ++E +  ++D ++ Q ETLR ILE      Y    + G  L   T  E F      V+  
Sbjct: 24  LKELDKASRDGKKAQEETLRSILEYAKDTVYGIEHHFGDILKASTAEELFGLYQKYVSPN 83

Query: 68  -HEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTS 126
            +EDL+PY++R  +G  + +  GKP    + +SGTT+ +PK++P  +   +   ++++  
Sbjct: 84  EYEDLRPYVERHKEGGSNILFPGKP-KMYATTSGTTK-EPKWIPVTERYYK---EVYKKM 138

Query: 127 YAFRNREFPIGKGKALQFIYGSKQSKT-KGGLNAGTATTNVYRSSTFKAEMKA-MQSQCC 184
            AF      + K KA    + S   K  +G    GT   ++  S   + ++   MQ+   
Sbjct: 139 NAFWLATLVLAKPKAFYGPFASIVGKAIEGAAPDGTVYGSI--SGVMQRDIPGFMQAIHT 196

Query: 185 SPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIRE 244
           +P  V    D+    Y   +  +        + +    +LV   +     ++E  +DI +
Sbjct: 197 APAAVFKISDYKARYYA--IMRMAIERNTHGIITANPSTLVEMQKNANEFYDEYVNDIEK 254

Query: 245 GVLSSRITVPS-IRAAMSKILKPNPELADLIHKKCSGLSNWYG--LIPELFPNAKYLSGI 301
           G LS    +   IRA +  +LKPN + A     +   L   YG  L    +P  + ++  
Sbjct: 255 GTLSHLFNISDEIRAELEPLLKPNRKRA----AELRALKEKYGNVLPKHYWPEMQVVNVW 310

Query: 302 MTGSMEHYLKKLRH-YAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEF 360
             G+ + Y  K++  +  D       Y SSE   G  +   +   +    +  +  YFEF
Sbjct: 311 FCGNTQVYFDKIKDSFPKDCVFNEFGYFSSECRAGLVLKTGIQDTV----LFGHKTYFEF 366

Query: 361 IPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVT 396
           I       ES++    P    + EV+ G+ Y +++T
Sbjct: 367 IH------ESEMEKENPAITQMYEVQPGQRYCMLIT 396


>gi|340622581|ref|YP_004741033.1| CF4-like protein [Capnocytophaga canimorsus Cc5]
 gi|339902847|gb|AEK23926.1| CF4-like protein [Capnocytophaga canimorsus Cc5]
          Length = 502

 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 16/168 (9%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           I + E       R+Q   L +++E   + E  Q  G +   D E F   VPLV +ED +P
Sbjct: 18  IGQIEEFVNSPHRVQERVLSQLIEAAKNTEIGQKYGFSSIKDYEQFALRVPLVFYEDFEP 77

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNRE 133
           +I+R   G+ S I+   PI   ++SSGTT  K KF+P +D+             A +N  
Sbjct: 78  FIERARKGE-SNIIWNTPIKWFAKSSGTTNAKSKFIPVSDQ-------------ALQNCH 123

Query: 134 FPIGKGKALQFIYGSKQSK--TKGGLNAGTATTNVYRSSTFKAEMKAM 179
           +  GK     ++  ++ SK  T   L  G +     ++ TF  ++ A+
Sbjct: 124 YKAGKDMLCLYLNNNENSKLFTGKSLRLGGSKELYEQNGTFFGDLSAI 171


>gi|443707276|gb|ELU02954.1| hypothetical protein CAPTEDRAFT_111504, partial [Capitella teleta]
          Length = 377

 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 96/189 (50%), Gaps = 12/189 (6%)

Query: 213 IQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPS-IRAAMSKILKPNPELA 271
           +Q + S  A   +  F+T E   ++L  DIR G L   + V   +R  +++ LK +P+ A
Sbjct: 13  LQHIDSLLAPVCLTFFKTIEQNADQLVSDIRAGRLFDGLDVDDDVRRTVNEHLKADPKRA 72

Query: 272 DLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLR-HYAGDLPLMSADYGSS 330
           D + K+    S+   L   L+P  + +    +G  E   + LR  +  ++ ++SA +G++
Sbjct: 73  DEVQKELGKGSDNLAL--RLWPCLRVVLMATSGEFEASARLLRASFLKEVFVVSAAHGAT 130

Query: 331 EGWIGANVNPSLPP--ELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVG 388
           EG IG  ++PS     E  T+A   +  + EFIP      E  +    PK + L ++++G
Sbjct: 131 EGSIGVILDPSKDSITETPTYAFSHSTAFLEFIP------EDNIGEENPKTLFLDQLELG 184

Query: 389 EEYEIIVTN 397
             YEI+VTN
Sbjct: 185 HSYEIVVTN 193


>gi|375149269|ref|YP_005011710.1| GH3 auxin-responsive promoter [Niastella koreensis GR20-10]
 gi|361063315|gb|AEW02307.1| GH3 auxin-responsive promoter [Niastella koreensis GR20-10]
          Length = 500

 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 1/90 (1%)

Query: 28  QRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPIL 87
           QRE L+ ++      E+ +    +   + ++FK  VP+  +EDLQPY+QRI+ G+   +L
Sbjct: 30  QREVLQDLVTSAQYTEFGRKYNFSALFNVKTFKQTVPIHEYEDLQPYVQRIMRGE-QNLL 88

Query: 88  TGKPITTISRSSGTTQGKPKFLPFNDELME 117
              P+   ++SSGTT  K KF+P  DE +E
Sbjct: 89  WNTPVYWFAKSSGTTSDKSKFIPVTDESLE 118


>gi|325281757|ref|YP_004254299.1| GH3 auxin-responsive promoter [Odoribacter splanchnicus DSM 20712]
 gi|324313566|gb|ADY34119.1| GH3 auxin-responsive promoter [Odoribacter splanchnicus DSM 20712]
          Length = 502

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 93/386 (24%), Positives = 162/386 (41%), Gaps = 92/386 (23%)

Query: 26  RIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISP 85
           ++QR+TL+++L   A+ EY +    N     E ++  +P+V +ED++  + R ++G  + 
Sbjct: 28  KVQRDTLQELLTLAANTEYGRKYHFNTILTAEQYRERLPIVHYEDIRDLVLRTMEGQ-NN 86

Query: 86  ILTGKPITTISRSSGTTQGKPKFLPFNDELMETT-LQIFRTSYAFRNREFP---IGKGKA 141
           +L  + I   ++SSGTT  K KF+P +  ++E    +  +   A  NR +P   +  GK 
Sbjct: 87  LLWPEEIKWFAKSSGTTDAKSKFIPVSPSVLENCHFRGGKDVIAIFNRLYPEAQVFSGKT 146

Query: 142 LQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQSLYC 201
           L     S+ SK+      G  +  +  ++ F A M        +PD  I           
Sbjct: 147 LALGGSSEVSKSNSHCQYGDLSAIMISNTPFWANMMK------TPDSSIM---------- 190

Query: 202 HLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIR--EGVLSSRITVPSIRAA 259
            L+    + E+I+ +  T                  + +D+R   GV S  +TV  I   
Sbjct: 191 -LMSN--WEEKIEKICET-----------------TIKEDVRCLAGVPSWFLTV--IHKI 228

Query: 260 MSKILKPN-----PELADLIHKKCSGL---SNWYGLIPELFPNAKYLSGIMTGSMEHYLK 311
           + K  K N     P L   IH   S +     +  L+P+  P  KYL             
Sbjct: 229 LEKTGKSNLHEVWPNLELFIHGGISFIPYREQYKRLLPD--PKMKYLE------------ 274

Query: 312 KLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIG-YFEFIPQRLGNLES 370
                          Y +SEG+ G   +    PE A+  ++ + G Y+EF+P       S
Sbjct: 275 --------------TYNASEGFFGLQDD----PEDASMLLMLDYGVYYEFLPM------S 310

Query: 371 QVLCIEPKPVGLTEVKVGEEYEIIVT 396
           ++   +P+ + L EV+ G  Y +I+T
Sbjct: 311 ELGKTKPRTLLLEEVETGVNYALIIT 336


>gi|333378591|ref|ZP_08470322.1| hypothetical protein HMPREF9456_01917 [Dysgonomonas mossii DSM
           22836]
 gi|332883567|gb|EGK03850.1| hypothetical protein HMPREF9456_01917 [Dysgonomonas mossii DSM
           22836]
          Length = 504

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 91/407 (22%), Positives = 160/407 (39%), Gaps = 85/407 (20%)

Query: 1   MLEKMETVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFK 60
           M+ ++    +D   +E ++        Q + L  +L       + Q    +   + + F+
Sbjct: 1   MITRIAHKYLDYRYKEIDSFINKPIETQEKILEYLLRNGEQTLFGQQFNFSAIKNKDDFR 60

Query: 61  SCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELM---- 116
             VP+  +EDL+PY+ RII      +L  KP+   + SSGTT+ K K++P   E +    
Sbjct: 61  KQVPIFHYEDLRPYLDRIIVNKEQNVLWNKPVRWFAMSSGTTEDKSKYIPVTHESLTKGH 120

Query: 117 ----ETTLQIFRTSYAFRNREFPIGKGKALQFIYGSKQSKTKG-GLNAGTATTNVYRSST 171
               E  L I    YA  N++     GK L  + GSKQ    G G+  G  +  + ++  
Sbjct: 121 YKCGEQMLAI----YAQANKDAKFFFGKTL-VLGGSKQINNIGDGIFTGDISAILIKNLY 175

Query: 172 FKAEMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTF 231
           F A++        +P+ +   PD+   L                                
Sbjct: 176 FWAKL------SRTPESISLLPDWETKL-------------------------------- 197

Query: 232 ELVWEELCDDIREGVLSSRITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPEL 291
               + L D   +  + + + VPS    + K +K +           +G S     + ++
Sbjct: 198 ----QALTDYAIKNDVRAFMGVPSWLLVLLKKIKTD-----------TGRS-----LTDI 237

Query: 292 FPNAK--YLSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATF 349
           +PN +  +  G+     E   KKL     D+      Y +SEG+ G   + S    L   
Sbjct: 238 WPNLEVFFHGGVSFTPFEEQYKKLIQ-KPDMYYWET-YNASEGFFGVQFSDSSKEML--- 292

Query: 350 AVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVT 396
            +L +  Y+EF+P       S+     PK + L EV+ G+ Y II++
Sbjct: 293 LMLDSGIYYEFVPM------SEWDKKNPKTLTLDEVETGQNYAIIIS 333


>gi|255533063|ref|YP_003093435.1| GH3 auxin-responsive promoter [Pedobacter heparinus DSM 2366]
 gi|255346047|gb|ACU05373.1| GH3 auxin-responsive promoter [Pedobacter heparinus DSM 2366]
          Length = 510

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 90/197 (45%), Gaps = 13/197 (6%)

Query: 13  LIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQ 72
           +I+      K+A + Q +TL KI+    +  + ++    G  D   FK  VP+  +E+L+
Sbjct: 15  VIKGINRWKKNAIKAQEDTLLKIVGAAKNTAFGKDHKFAGIKDYADFKKQVPIRDYEELR 74

Query: 73  PYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTS---YAF 129
           PYI R++ G+   +  GKP    +++SGTT G  K++P + E M   ++  R +   Y  
Sbjct: 75  PYIDRVVAGEKDVMWKGKP-QYFAKTSGTTSG-IKYIPISKESMPEHIKAARNALLTYVH 132

Query: 130 RNREFPIGKGKALQFIYGSKQSKTKGGLNAGTAT---TNVYRSSTFKAEMKAMQSQCCSP 186
                    GK + F+ GS     K G+N G  +    N+  +   K  + + Q+ C   
Sbjct: 133 ETGNVRFIDGKMI-FLQGSPVMTKKNGINVGRLSGIVANLVPAYLQKNRLPSYQTNCIED 191

Query: 187 DE----VIFGPDFHQSL 199
            E     I G   HQ +
Sbjct: 192 WEEKVDAIVGETIHQDM 208


>gi|383792041|dbj|BAM10423.1| GH3 family protein, partial [Salix japonica]
          Length = 100

 Score = 65.9 bits (159), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/72 (38%), Positives = 43/72 (59%)

Query: 296 KYLSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNI 355
           KY+  I+TG+M  Y+  L +Y+  LPL+   Y SSE + G N+NP   P   ++ ++P +
Sbjct: 1   KYVDVIVTGTMSQYIPTLDYYSNQLPLVCTMYASSECYFGVNLNPICKPSEVSYTLIPTM 60

Query: 356 GYFEFIPQRLGN 367
            YFEF+P    N
Sbjct: 61  AYFEFLPVHRNN 72


>gi|307108791|gb|EFN57030.1| hypothetical protein CHLNCDRAFT_51325 [Chlorella variabilis]
          Length = 691

 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 90/393 (22%), Positives = 156/393 (39%), Gaps = 73/393 (18%)

Query: 63  VPLVTHEDLQPYIQRIIDGD----------------ISPILTGKPITTISRSSGTTQGKP 106
           +PL ++ D QP I+R++                    +  ++G P+  I  +SGTT G  
Sbjct: 78  LPLTSYGDYQPAIERLLAAGRQYDAADPASRRRWEAAAGEVSGLPVFGIYCTSGTT-GSQ 136

Query: 107 KFLPFNDELMETTLQIFRTSYAFRNREFPIGKGKA-----LQFIYGSKQSKTKGGLNAG- 160
           K  P + E + + +++F    A   +  P+ + +A     L F +  +      G+  G 
Sbjct: 137 KQFPASMEALHSMIRVF----ALIQQATPLSRPQASSPRVLSFPFAREPQVLPNGVAMGP 192

Query: 161 TATTNVYRSSTFKAE---MKAMQSQCCSPDEVIFGP-DFHQSLYCHLLCGLIFREEIQLV 216
            +T N++R  + +     +K   +   SP  V  G  D H   Y H LC L  R ++  +
Sbjct: 193 MSTVNLHRMMSMRDSNPTLKRSAATALSPPLVSVGSGDVHTCYYLHWLCALPHRLQVVKI 252

Query: 217 FSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPSIRAAMSKILKPNPELADLIHK 276
             +F  +L+         W  L  D+ EG   S +      AA      PN      +  
Sbjct: 253 VESFGANLLLEINLLIEHWPSLMADLGEGRCFSWLPADGEAAADGAAGAPNATGGLPVPP 312

Query: 277 KCSGLSNWYGLIPELFPN-AKYLSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIG 335
             +  +    L P   P+ A  L  +  GSM  Y+  LR     +P +S  YG++EG+ G
Sbjct: 313 AATAAAVDAQLSPS--PDLALELQEVFDGSMSKYVPHLRELLPTVPFLSEVYGATEGFFG 370

Query: 336 ANVNPS------------------------LPPELATFAVLPNIG-YFEFIPQRLGNLES 370
                +                         P    ++ ++PN   Y EF+P      +S
Sbjct: 371 FQSEVAEFHAARREAAPADAAAAGFAAFQREPDGRKSYVLMPNADCYMEFLP-----CDS 425

Query: 371 QVLCIEPKPVG-----LTEVKVGEEYEIIVTNV 398
           Q    EP+  G     + EV+V + YE++V+++
Sbjct: 426 Q----EPEDAGAATVSMEEVEVAKRYELVVSSI 454


>gi|320102066|ref|YP_004177657.1| GH3 auxin-responsive promoter [Isosphaera pallida ATCC 43644]
 gi|319749348|gb|ADV61108.1| GH3 auxin-responsive promoter [Isosphaera pallida ATCC 43644]
          Length = 584

 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 84/366 (22%), Positives = 156/366 (42%), Gaps = 35/366 (9%)

Query: 13  LIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQ 72
           L   F   TK A+++QR  L ++LE +A++++ +  GL    D E+++  VP+  ++  +
Sbjct: 19  LARRFLDDTKRADQVQRRVLARLLERDAASDFARRHGLTTARDLETYRRRVPIRDYDGHE 78

Query: 73  PYIQRIIDGDISPILT-GKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSY---- 127
           P   R+  GD++ +   G  +   +++SGTT   PK +P   E    +L  +R  +    
Sbjct: 79  PDFARVRQGDLTALFGPGVEVLMFAKTSGTT-AIPKTIPVTRE----SLDAYRAGWKIWG 133

Query: 128 --AFRNREFPIGKG--KALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQC 183
             AF      + +G    LQ     ++S T  GL  G  T    R  +    +    + C
Sbjct: 134 IQAFDAHPDMLSQGLKPILQIAGDWRESFTPSGLPCGAITGLTARMQSPLVRL----AYC 189

Query: 184 CSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIR 243
             P  V    D     Y  L   L    ++  + +    +++   +  E     L  D+ 
Sbjct: 190 LHP-SVGRVKDVDTKYYLALRSALP--RDLGTIIAANPATVLGIVKLAERDAATLLRDLY 246

Query: 244 EGVLSSRITV---PSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIP-ELFPNAKYLS 299
           +G ++ R      P  + A+S  L        L+ +  S L     L P + +P+ ++L+
Sbjct: 247 DGTVAPRFREAIPPETQRALSWSLSRKHR--GLVRRLESLLERHGRLRPIDYWPHLQFLA 304

Query: 300 GIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNI--GY 357
               G+M  YL+    + G  P+      +SEG +      ++P E  T A + +    +
Sbjct: 305 NWTGGTMGAYLRDYPDWFGPKPVRDVGLIASEGRM------TIPIEDHTAAGILDFIHHH 358

Query: 358 FEFIPQ 363
           FEF+P+
Sbjct: 359 FEFLPE 364


>gi|363818320|gb|AEW31353.1| putative GH3 family protein [Elaeis guineensis]
          Length = 131

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/60 (60%), Positives = 44/60 (73%), Gaps = 5/60 (8%)

Query: 344 PELATFAVLPNIGYFEFIP----QRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
           PELATF VLPNI +FEFIP    + L N  S    IE +PVGLTEV+VG+EYE++VT+ A
Sbjct: 1   PELATFTVLPNIAFFEFIPLLKPEGLQNSASNDY-IESEPVGLTEVEVGKEYEVVVTSFA 59


>gi|441499730|ref|ZP_20981905.1| putative auxin-regulated protein [Fulvivirga imtechensis AK7]
 gi|441436470|gb|ELR69839.1| putative auxin-regulated protein [Fulvivirga imtechensis AK7]
          Length = 502

 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 1/104 (0%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           I + E   K    +Q E  RK+L E  + E+ +  G    T  + +   VP+  +ED+ P
Sbjct: 9   IHDIELFIKYPHDVQHELFRKLLGEAKNTEFGKKYGFRDITSYKEYTERVPVHAYEDIFP 68

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
           YIQR++ G+   +L    IT  ++SSGTT  + KF+P + E +E
Sbjct: 69  YIQRLMRGE-QNVLWPTEITWFAKSSGTTNARSKFIPVSPEALE 111


>gi|374596876|ref|ZP_09669880.1| GH3 auxin-responsive promoter [Gillisia limnaea DSM 15749]
 gi|373871515|gb|EHQ03513.1| GH3 auxin-responsive promoter [Gillisia limnaea DSM 15749]
          Length = 502

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 83/176 (47%), Gaps = 6/176 (3%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           I + E   K    +Q+E LR ++ +  + E+ +     G  + ESF   VP+ ++E+ +P
Sbjct: 18  IHQMELFMKYPNEVQQELLRHLISKAKNTEFGKKYDFAGIQNYESFARNVPIHSYEEYEP 77

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTL----QIFRTSYAF 129
            I+R   G+ + I    PI   ++SSGTT  K KF+P +D+ +E       +     Y  
Sbjct: 78  EIERCRRGE-NNIFWPTPIKWFAKSSGTTNAKSKFIPVSDDSLENCHYAAGKDLLCMYLN 136

Query: 130 RNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCS 185
            N    +  GK+L+ + GSK+     G + G  +  +  +  F AE  +  S   S
Sbjct: 137 NNPNSQLFTGKSLR-LGGSKEIYRNNGTSYGDLSAILIDNMPFWAEFSSTPSNEVS 191


>gi|374386174|ref|ZP_09643674.1| hypothetical protein HMPREF9449_02060 [Odoribacter laneus YIT
           12061]
 gi|373224103|gb|EHP46443.1| hypothetical protein HMPREF9449_02060 [Odoribacter laneus YIT
           12061]
          Length = 502

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 89/378 (23%), Positives = 159/378 (42%), Gaps = 80/378 (21%)

Query: 28  QRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPIL 87
           QR+TL+++L    + EY Q    +  T PE ++  +P+V +ED+   I++ ++G    IL
Sbjct: 30  QRDTLKELLRTAQNTEYGQQYDFHSLTTPEQYRERLPIVHYEDINELIRQTMNGK-QNIL 88

Query: 88  TGKPITTISRSSGTTQGKPKFLPFNDELMETT-LQIFRTSYAFRNREFP---IGKGKALQ 143
             + I   ++SSGTT  K KF+P +   +E    +  +   +  NR +P   +  GK L 
Sbjct: 89  WPEEIKWFAKSSGTTDAKSKFIPVSPSSLENCHFRGGKDVVSIFNRLYPEAQVFSGKTLA 148

Query: 144 FIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQSLYCHL 203
               S+ +K       G  +  +  ++ F A          +PD  I             
Sbjct: 149 LGGSSEVNKINTNCQYGDLSAILISNTPFWANFMK------TPDSSI------------- 189

Query: 204 LCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCD-DIREGVLSSRITVPSIRAAMSK 262
                      ++ S +   L           E++C+  I+E V      VPS       
Sbjct: 190 -----------MLMSNWEEKL-----------EKICEITIKEDV-RCLAGVPSW------ 220

Query: 263 ILKPNPELADLIHK--KCSGLSNWYGLIPELFPNAK-YLSGIMTGSMEHYLKKLRHYAGD 319
                     LIHK  + +G SN Y    E++PN + ++ G +  S   Y ++ +    D
Sbjct: 221 -------FLTLIHKILEKTGKSNLY----EVWPNLELFIHGGI--SFVPYRQQYQELLPD 267

Query: 320 LPLMSAD-YGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPK 378
             +   + Y +SEG+ G   +PS   + +   +L    Y+EF+P       S+     P+
Sbjct: 268 AKMKYMETYNASEGFFGIQDDPS---DSSMLLMLDYGVYYEFMPM------SETGKTNPR 318

Query: 379 PVGLTEVKVGEEYEIIVT 396
            + L+EV+ G  Y +I++
Sbjct: 319 TLLLSEVETGVNYALIIS 336


>gi|296121927|ref|YP_003629705.1| GH3 auxin-responsive promoter [Planctomyces limnophilus DSM 3776]
 gi|296014267|gb|ADG67506.1| GH3 auxin-responsive promoter [Planctomyces limnophilus DSM 3776]
          Length = 559

 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 82/392 (20%), Positives = 167/392 (42%), Gaps = 36/392 (9%)

Query: 17  FETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQ 76
           F   T      Q+  L+++L  +A + + ++           F+  +P+  +E+  PYI+
Sbjct: 24  FHQATMRPRESQQAFLKELLAAHADSAFGKDHFFREIQTAADFQKRLPIAEYENFAPYIE 83

Query: 77  RIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRN----R 132
           R+  G+ + +   + I   + +SGT+  + KF+P  +      L  +R  ++        
Sbjct: 84  RVKAGETTAMFCNEQIVMFNLTSGTSSTR-KFIPVTNRY----LSDYRRGWSMWGLQTFE 138

Query: 133 EFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIF 191
           ++P +     + F   SK+S T  G+  G+ +       T K     ++S  C P +   
Sbjct: 139 KYPQLFLQPKVSFGSASKESVTSAGIPCGSLS-----GLTVKMNPAVVRSTYCLPADTAD 193

Query: 192 GPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRI 251
             D     Y +   G+  +  + +  +     L+   R      E L  ++ +G  S   
Sbjct: 194 HADAFARCYLNWRIGI--QRNLGMGVAPNPGLLLQFARYGTENAECLIRELHDGTHSCTA 251

Query: 252 TVPS-IRAAMSKILKPNPELADLIHKKCSGLSNWYGLIP-ELFPNAKYLSGIMTGSMEHY 309
            +P  ++  + + ++PN + A  + +     +    L P +++P  K ++  + G    Y
Sbjct: 252 ALPRHLQNWLKRQIRPNRKRARELEQI---FTRQMTLHPKDVWPQLKLIACWLGGPTRAY 308

Query: 310 LKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNI--GYFEFIPQRLGN 367
           + ++  Y GD+ L      SSE  I      SLP E  T A + ++   YFEF+P  +  
Sbjct: 309 ISQIPEYFGDVTLRDIGLISSESRI------SLPKEDNTPAGILDVTSAYFEFVP--VDE 360

Query: 368 LESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
           ++S      P  +   E++ G+EY I++T  +
Sbjct: 361 MDSS----NPVVLDAAELETGKEYYILLTTTS 388


>gi|242051248|ref|XP_002463368.1| hypothetical protein SORBIDRAFT_02g042520 [Sorghum bicolor]
 gi|241926745|gb|EER99889.1| hypothetical protein SORBIDRAFT_02g042520 [Sorghum bicolor]
          Length = 190

 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 4/107 (3%)

Query: 306 MEHYLKKLRHYA-GDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIP-- 362
           M  Y+  L  Y+ G +PL+   Y SSE + G N+     P+  ++ +LP++ YFEF+P  
Sbjct: 1   MAQYIPMLEFYSDGRIPLVCTMYASSESYFGVNLRLLCSPKDVSYTILPSMAYFEFVPFD 60

Query: 363 QRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVAVAGSLFSRIP 409
             L ++E   +    K V L +VKVG  YE +VT   V    ++R P
Sbjct: 61  DGLKSVEDDEVVENDKLVSLVDVKVGCYYEFVVTTF-VGICRYNRAP 106


>gi|390445431|ref|ZP_10233175.1| GH3 auxin-responsive promoter [Nitritalea halalkaliphila LW7]
 gi|389662104|gb|EIM73686.1| GH3 auxin-responsive promoter [Nitritalea halalkaliphila LW7]
          Length = 509

 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 56/104 (53%), Gaps = 1/104 (0%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           I + E   +D E +Q+    +++E      + +  G +     E F   VP+ T+EDLQP
Sbjct: 16  IGQIERFMEDPEEVQQGIFEELIEAGKETAFGKKYGFSKIRSYEDFARQVPIHTYEDLQP 75

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
           YI++ + G+   +  GK I   S+SSGTT  + KF+P + E +E
Sbjct: 76  YIEQTMRGEQGILWPGK-IEWFSKSSGTTSSRSKFIPVSQESLE 118


>gi|429750273|ref|ZP_19283329.1| GH3 auxin-responsive promoter [Capnocytophaga sp. oral taxon 332
           str. F0381]
 gi|429165538|gb|EKY07584.1| GH3 auxin-responsive promoter [Capnocytophaga sp. oral taxon 332
           str. F0381]
          Length = 502

 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 12/190 (6%)

Query: 1   MLEKMETVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFK 60
           ML  + +  +   I + +    D E++Q   L  ++    + E  +    +   + E F 
Sbjct: 1   MLNTITSWFLKRRISQIQEFVLDPEKVQERVLSSLISAAQNTELGKQYHFSEIKNYEQFA 60

Query: 61  SCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME--- 117
             VPL T+E  +PYI+R   G+ + I    PI   ++SSGTT  K KF+P ++E +    
Sbjct: 61  QRVPLTTYEAFEPYIERARRGERN-IFWHSPIKWFAKSSGTTNAKSKFIPVSEEALRDCH 119

Query: 118 -TTLQIFRTSYAFRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEM 176
             + +     Y   N +  + KGK+L+ + GSKQ   + G   G  +  +  +  F AE 
Sbjct: 120 YKSGKDMLCMYLNNNEDSGLFKGKSLR-LGGSKQLYEQNGTYFGDLSAILIENLPFWAEW 178

Query: 177 KAMQSQCCSP 186
                  C+P
Sbjct: 179 ------SCTP 182


>gi|219815993|gb|ACL37111.1| putative auxin-regulated protein [uncultured bacterium fCS1]
          Length = 149

 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 63/118 (53%), Gaps = 7/118 (5%)

Query: 28  QRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPIL 87
           QRE L+ ++ +    E+ +    +   + + FK  VP+  ++DL+ Y+QR+++G+   IL
Sbjct: 30  QREVLQNLVTDAQYTEFGKKYHFSSLFNVKEFKKRVPIQEYDDLKCYVQRMMNGE-ENIL 88

Query: 88  TGKPITTISRSSGTTQGKPKFLPFN-DELMETTLQIFRTSYAFRNREFP-----IGKG 139
            G PI   ++SSGTT  K KF+P + D L +   Q  +   +   + FP      GKG
Sbjct: 89  CGTPINWFAKSSGTTSDKSKFIPISEDSLQDNHFQASKDVLSNYYKNFPSSDLLTGKG 146


>gi|374375547|ref|ZP_09633205.1| GH3 auxin-responsive promoter [Niabella soli DSM 19437]
 gi|373232387|gb|EHP52182.1| GH3 auxin-responsive promoter [Niabella soli DSM 19437]
          Length = 502

 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 1/90 (1%)

Query: 28  QRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPIL 87
           QRE L+ +       E+ +  G N   +   FK  VP+  + DL+PYI+R ++G+   +L
Sbjct: 17  QREVLQNLATSAQYTEFGRKYGFNRLYNIRDFKKAVPVHEYNDLKPYIERCMNGE-QNLL 75

Query: 88  TGKPITTISRSSGTTQGKPKFLPFNDELME 117
              PI   ++SSGT+  K KF+P ++E +E
Sbjct: 76  WNSPIAWFAKSSGTSGDKSKFIPISEESLE 105


>gi|182412319|ref|YP_001817385.1| GH3 auxin-responsive promoter [Opitutus terrae PB90-1]
 gi|177839533|gb|ACB73785.1| GH3 auxin-responsive promoter [Opitutus terrae PB90-1]
          Length = 528

 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 57/89 (64%), Gaps = 1/89 (1%)

Query: 28  QRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPIL 87
           Q++T R++L + A+ ++ ++ GL    D E F++ VPL ++E L P+I R++ G+   + 
Sbjct: 35  QQQTFRRLLPKLAATQFGRDTGLEPGLDYEKFRARVPLRSYEQLAPWIDRMVRGEADVLW 94

Query: 88  TGKPITTISRSSGTTQGKPKFLPFNDELM 116
            G+    +  +SGTT G+P+ LP ++E++
Sbjct: 95  PGRCALYVL-TSGTTTGQPRRLPVSEEML 122


>gi|408371524|ref|ZP_11169288.1| hypothetical protein I215_11509 [Galbibacter sp. ck-I2-15]
 gi|407743000|gb|EKF54583.1| hypothetical protein I215_11509 [Galbibacter sp. ck-I2-15]
          Length = 506

 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 6/176 (3%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
             + E   K    +Q E L  +L  +++ E  +  G +  T  + F   VP+V +ED++P
Sbjct: 18  FHQMELFLKYPAEVQTEVLNHLLSRSSATELGKQYGFSEITSYKIFADRVPIVRYEDIEP 77

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME----TTLQIFRTSYAF 129
            I+R   G+ S I    PI   ++SSGTT  K KF+P + E +E       +   + Y  
Sbjct: 78  MIERSRKGE-SNIFWPTPIKWFAKSSGTTNAKSKFIPVSTESLEDCHFKAGKDMLSLYFN 136

Query: 130 RNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCS 185
            N E  +  GK+L+ + GSK+         G  +  +  +  F AEM +  S   S
Sbjct: 137 NNEESRLFDGKSLR-LGGSKELYQSNQTFFGDLSAIIIDNMPFWAEMSSTPSNKVS 191


>gi|443707544|gb|ELU03074.1| hypothetical protein CAPTEDRAFT_197738, partial [Capitella teleta]
          Length = 414

 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 97/195 (49%), Gaps = 19/195 (9%)

Query: 211 EEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITV-PSIRAAMSKILKPNPE 269
           +++Q +   F+ S+   ++T EL  E L  D+  G LS  + V   +R  + + LKPNP 
Sbjct: 22  KDLQYIDGMFSSSVFTLYKTIELNGERLVADLASGSLSKGLDVGDEVRKVVDRHLKPNPI 81

Query: 270 LADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRH-YAGDLPLMSADYG 328
            A  +  + +  ++   L   L+P  K ++   TG  E + + LR  +  D+ L +  YG
Sbjct: 82  RAAEVWGELNQGNDRLAL--RLWPELKLVNMTTTGEFEAHARLLRKSFLKDVCLQTLMYG 139

Query: 329 SSEGWIGANVNPSLPPELATF-----AVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLT 383
           S+EG IG  + P  P + ATF     A  P I + EFI       E  +    P  + + 
Sbjct: 140 STEGQIG--IVP-FPQKGATFEQKSYAFNPFI-FLEFIA------EENIAEDNPPTLFVD 189

Query: 384 EVKVGEEYEIIVTNV 398
           ++++G+ YEI+++N 
Sbjct: 190 QLELGKSYEIVLSNT 204


>gi|189502657|ref|YP_001958374.1| hypothetical protein Aasi_1338 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|189498098|gb|ACE06645.1| hypothetical protein Aasi_1338 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 508

 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 53/91 (58%), Gaps = 1/91 (1%)

Query: 27  IQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPI 86
           +Q   L  ++++ A  EY Q    +     + FK  VP+ T+E+L PYI++++ G ++ +
Sbjct: 29  MQATLLHTLIQKGAQTEYGQQFSYHTIATKQHFKEQVPICTYEELYPYIKKVLQGSVN-V 87

Query: 87  LTGKPITTISRSSGTTQGKPKFLPFNDELME 117
           L   PI   ++SSGTT  + KF+P + E ++
Sbjct: 88  LWPTPIKWFAKSSGTTNDRSKFIPVSTEALK 118


>gi|299147037|ref|ZP_07040104.1| GH3 auxin-responsive promoter family protein [Bacteroides sp.
           3_1_23]
 gi|298514922|gb|EFI38804.1| GH3 auxin-responsive promoter family protein [Bacteroides sp.
           3_1_23]
          Length = 508

 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 58/107 (54%), Gaps = 1/107 (0%)

Query: 11  DELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHED 70
           D  +++ +     A  IQ   L +++ + A  E+ +    +   + E F+  VP+ T+E+
Sbjct: 12  DSRLKQIDLYASQASEIQHRVLSRLIHQAAQTEWGRKYDYSSIRNYEDFRKRVPIQTYEE 71

Query: 71  LQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
           ++PY++R+  G+   +L    I   ++SSGTT  K KFLP + E +E
Sbjct: 72  IKPYVERLRAGE-QNLLWPSEIRWFAKSSGTTNDKSKFLPVSKEALE 117


>gi|336417435|ref|ZP_08597759.1| hypothetical protein HMPREF1017_04867 [Bacteroides ovatus
           3_8_47FAA]
 gi|383111108|ref|ZP_09931926.1| hypothetical protein BSGG_2213 [Bacteroides sp. D2]
 gi|423294049|ref|ZP_17272176.1| hypothetical protein HMPREF1070_00841 [Bacteroides ovatus
           CL03T12C18]
 gi|313694678|gb|EFS31513.1| hypothetical protein BSGG_2213 [Bacteroides sp. D2]
 gi|335936181|gb|EGM98121.1| hypothetical protein HMPREF1017_04867 [Bacteroides ovatus
           3_8_47FAA]
 gi|392676717|gb|EIY70144.1| hypothetical protein HMPREF1070_00841 [Bacteroides ovatus
           CL03T12C18]
          Length = 508

 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 58/107 (54%), Gaps = 1/107 (0%)

Query: 11  DELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHED 70
           D  +++ +     A  IQ   L +++ + A  E+ +    +   + E F+  VP+ T+E+
Sbjct: 12  DSRLKQIDLYASQASEIQHRVLSRLIHQAAQTEWGRKYDYSSIRNYEDFRKRVPIQTYEE 71

Query: 71  LQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
           ++PY++R+  G+   +L    I   ++SSGTT  K KFLP + E +E
Sbjct: 72  IKPYVERLRAGE-QNLLWPSEIRWFAKSSGTTNDKSKFLPVSKEALE 117


>gi|315225098|ref|ZP_07866915.1| GH3 auxin-responsive promoter family protein [Capnocytophaga
           ochracea F0287]
 gi|420159440|ref|ZP_14666243.1| GH3 auxin-responsive promoter [Capnocytophaga ochracea str. Holt
           25]
 gi|314944781|gb|EFS96813.1| GH3 auxin-responsive promoter family protein [Capnocytophaga
           ochracea F0287]
 gi|394762274|gb|EJF44540.1| GH3 auxin-responsive promoter [Capnocytophaga ochracea str. Holt
           25]
          Length = 502

 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 10/178 (5%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           I++ +   +   R+Q   L ++L+     E+ +        + E F    PLV++E  +P
Sbjct: 18  IDQIQEFVEHPHRVQERVLLELLDAAKDTEHGKLYNFAEVKNYEQFSRNTPLVSYEAFEP 77

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTS------Y 127
           Y++R   G+ + +    PI   ++SSGTT  K KF+P ++E ++  L  +++       Y
Sbjct: 78  YVERARRGERN-VFWHTPIKWFAKSSGTTNAKSKFIPVSEEALQ--LCHYKSGKDMLCLY 134

Query: 128 AFRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCS 185
              N +  + KGK+L+ + GSKQ   + G   G  +  +  +  F AE     S   S
Sbjct: 135 LNNNEDSNLFKGKSLR-LGGSKQLYEQNGTYFGDLSAILIENLPFWAEWSCTPSNKVS 191


>gi|429725897|ref|ZP_19260710.1| GH3 auxin-responsive promoter [Prevotella sp. oral taxon 473 str.
           F0040]
 gi|429148445|gb|EKX91451.1| GH3 auxin-responsive promoter [Prevotella sp. oral taxon 473 str.
           F0040]
          Length = 502

 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 88/390 (22%), Positives = 167/390 (42%), Gaps = 76/390 (19%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           +   ++  +  E +QR+ L +++ + A   Y +       T  ESF   VPL  +E L+ 
Sbjct: 15  VRTIQSYPEQGEMLQRQVLARLIRQAARTAYGERYDFTSITSYESFAQRVPLNDYESLKT 74

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNRE 133
            I R+  G+ S +  GK +   ++SSGTT  K KF+P +++ ++                
Sbjct: 75  DIDRMRHGESSILWPGK-VRWYAKSSGTTNDKSKFIPVSNQGLQQL-------------H 120

Query: 134 FPIGKGKALQFIYGSKQSK--TKGGLNAGTATTNVYRSSTFK-AEMKAMQSQCCSPDEVI 190
           +  G+     +++ + +S+  T   L  G +    Y S+T +  ++ A+ ++  SP    
Sbjct: 121 YAGGRDSVALYLHNNPESRLFTGKSLILGGSHQPNYDSTTSRVGDLSAILNENASP---- 176

Query: 191 FGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSR 250
                    + HL     FR   + V      +L+  F       E+  D I +  L + 
Sbjct: 177 ---------FVHL-----FRVPSKRV------ALLEDF-------EQKRDLIAQETLHAN 209

Query: 251 IT-VPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAK--YLSGI-MTGSM 306
           +T +  + + M  +L    E+        SG  +    + E++PN +  +  G+  T   
Sbjct: 210 VTSIAGVPSWMMAVLMRLMEI--------SGAKD----LTEVWPNLEVFFHGGVAFTPYR 257

Query: 307 EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLG 366
           E YL+ +     D       Y +SEG+ G   NP+   + +   +L    ++EFIP    
Sbjct: 258 EQYLRLI---PSDKMHYMETYNASEGFFGLQTNPA---DKSMEFMLDYDVFYEFIP---- 307

Query: 367 NLESQVLCIEPKPVGLTEVKVGEEYEIIVT 396
            LE +V C  P  + + EV+ G  Y ++++
Sbjct: 308 -LE-EVGCDNPTILPIWEVEAGRNYALVIS 335


>gi|393786057|ref|ZP_10374196.1| hypothetical protein HMPREF1068_00476 [Bacteroides nordii
           CL02T12C05]
 gi|392660641|gb|EIY54249.1| hypothetical protein HMPREF1068_00476 [Bacteroides nordii
           CL02T12C05]
          Length = 503

 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 84/176 (47%), Gaps = 17/176 (9%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           ++E +     A  IQ   + +++ + A+ E+ +        + E FKS +P+ T+E+++P
Sbjct: 15  LKEIDLYASQAGEIQHRVMTRLVTQAANTEWGKKYDYKSIRNYEDFKSRIPVQTYEEIKP 74

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNRE 133
           Y++R+  G+   +L    I   ++SSGTT  K KFLP + E             A ++  
Sbjct: 75  YVERLRAGE-QNLLWPSEIRWFAKSSGTTNDKSKFLPVSKE-------------ALQDIH 120

Query: 134 FPIGKGKALQFIYGSKQSK---TKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSP 186
           +  GK  A  +   +  S+    KG +  G+ + N+  + +   ++ A+  Q  SP
Sbjct: 121 YRGGKDAAALYFRINPDSRFFSGKGLILGGSHSPNLNSNHSLVGDLSAILIQNVSP 176


>gi|443717176|gb|ELU08370.1| hypothetical protein CAPTEDRAFT_181851 [Capitella teleta]
          Length = 476

 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 78/318 (24%), Positives = 129/318 (40%), Gaps = 56/318 (17%)

Query: 98  SSGTTQGK----PKFLPFNDELMETTLQIFRTSYAFRNREFPIGKGKALQFIYGSKQSKT 153
           SSGTT GK    P F  + +  +   + +  + YA  N       G+ L   Y  K+  +
Sbjct: 2   SSGTT-GKFKRFPLFAGYKENFVGRRVHVTASLYAKVN-----SLGRILNLAYKPKEMTS 55

Query: 154 KGGLNAGTATTNVYRSSTFK-----AEMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLI 208
           K G+  G  +  +    TF      A +   Q+Q           ++  +L+       +
Sbjct: 56  KAGIQMGAGSHFLRPKLTFSIVPNGAAVSDQQTQ-----------NYIMALFA------L 98

Query: 209 FREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITV-PSIRAAMSKILKPN 267
             +++Q +    A    + FR      E+LC D+  G LS RI V   +R  +++ L+  
Sbjct: 99  AEDDLQYIDGLLAPLCWNFFRLITDRGEDLCHDLENGCLSGRIKVEEGVRKEINRKLRVG 158

Query: 268 PELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLR-HYAGDLPLMSAD 326
              A  + K+    S   GL   L+PN K +    TG+     + L+  Y   +      
Sbjct: 159 VNRASQVRKELRKGSE--GLALRLWPNLKLVHIATTGTFASAYRTLKSSYLKGVHCRRMM 216

Query: 327 YGSSEGWIGANVNPSLPPEL--------ATFAVLPNIGYFEFIPQRLGNLESQVLCIEPK 378
           + SSE  IG       PPE          TF    +  +FEFIP      E ++    PK
Sbjct: 217 HVSSEAQIG------FPPECHIDSEENPHTFVFAHSSAFFEFIP------EDEMDSPSPK 264

Query: 379 PVGLTEVKVGEEYEIIVT 396
              L +++VG+ YE+++T
Sbjct: 265 TFFLDQLQVGQTYEVLLT 282


>gi|443319431|ref|ZP_21048663.1| acyl-CoA synthetase/AMP-acid ligase [Leptolyngbya sp. PCC 6406]
 gi|442780950|gb|ELR91058.1| acyl-CoA synthetase/AMP-acid ligase [Leptolyngbya sp. PCC 6406]
          Length = 549

 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 85/392 (21%), Positives = 171/392 (43%), Gaps = 44/392 (11%)

Query: 13  LIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQ 72
           L +  E  T+  +  Q   LR++L  + + ++ +    +       ++  VP+  +E  +
Sbjct: 16  LKQRLEAATQAPDLAQERLLRQLLSHHGTTQFGREHRFDQIRTLLDYRQAVPVRDYEGFR 75

Query: 73  PYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNR 132
           PY+Q+++ G  + IL  +P+   + +SGTT G+PK++P    + +   ++ R       +
Sbjct: 76  PYVQQMMAGQ-AKILLNEPVRMFTMTSGTT-GQPKYIPVTARVEQGGARLMRQWLYRILQ 133

Query: 133 EFPIGKGKALQFIYG-SKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCS-PDEVI 190
           + P    +A+  I   + +  T GG+  G+ +  +Y+      ++ A+  +  + P  V 
Sbjct: 134 DHPTFLSRAVVGIVSPAIEGYTPGGIPYGSLSGRIYQ------QIPALIRRTYAVPYGVF 187

Query: 191 FGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSR 250
             PD+ +  +    C L    ++  + +    +L           E L   I +G     
Sbjct: 188 EIPDYDRRYWAIARCALA--RQVSFLCTPNPSTLKRLATVMTHQAESLIRAIADGAGGEG 245

Query: 251 ITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLI--PELFPNAKYLSGIMTGSMEH 308
           I  P+ R        P PE A    K+   + N  G +   + +P+ + L     GS+  
Sbjct: 246 I--PAQR--------PLPERA----KQLEQIFNTTGALRPRDCWPHLELLGCWTGGSVGA 291

Query: 309 YLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPN--IGYFEFIPQRLG 366
             ++L    G LP+    Y +SE  I      +LP E  T A L +  +  +EFIP+   
Sbjct: 292 QARQLTADYGPLPIRDLGYLASEARI------TLPYENNTPAGLLDLTLNVYEFIPEACA 345

Query: 367 NLESQVLCIEPKPVGLT-EVKVGEEYEIIVTN 397
           +  +        P+ L+ E++ G++Y+I++T 
Sbjct: 346 DQAN-------PPILLSHELEKGQQYQILLTT 370


>gi|410097049|ref|ZP_11292033.1| hypothetical protein HMPREF1076_01211 [Parabacteroides goldsteinii
           CL02T12C30]
 gi|409224843|gb|EKN17767.1| hypothetical protein HMPREF1076_01211 [Parabacteroides goldsteinii
           CL02T12C30]
          Length = 518

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 57/103 (55%), Gaps = 1/103 (0%)

Query: 15  EEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPY 74
           +E E   ++ +R+QR+ LR +L    + E+            E F   VPL  ++D++PY
Sbjct: 29  KEIEKYGQETDRLQRKQLRSLLSAARNTEWGLKYDYKSIKRYEDFCQRVPLQIYDDIKPY 88

Query: 75  IQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
           + R+I+G+ + IL    +   ++SSGTT  K KFLP   E+++
Sbjct: 89  VTRMINGERN-ILWPSVVKWYAKSSGTTNDKSKFLPVTPEILQ 130


>gi|423301124|ref|ZP_17279148.1| hypothetical protein HMPREF1057_02289 [Bacteroides finegoldii
           CL09T03C10]
 gi|408472459|gb|EKJ90987.1| hypothetical protein HMPREF1057_02289 [Bacteroides finegoldii
           CL09T03C10]
          Length = 502

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 59/107 (55%), Gaps = 1/107 (0%)

Query: 11  DELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHED 70
           D  +++ +    +A  IQ   L +++++ +  E+ +    +     E F+  VP+ T+E+
Sbjct: 12  DSRLKQIDLYASEASEIQHRVLNRLVQQASQTEWGKKYDYSSIRSYEDFRKRVPIQTYEE 71

Query: 71  LQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
           ++PY++R+  G+   +L    I   ++SSGTT  K KFLP + E +E
Sbjct: 72  IKPYVERLRAGE-QNLLWPSEIRWFAKSSGTTNDKSKFLPVSKEALE 117


>gi|213963078|ref|ZP_03391337.1| GH3 auxin-responsive promoter family protein [Capnocytophaga
           sputigena Capno]
 gi|213954419|gb|EEB65742.1| GH3 auxin-responsive promoter family protein [Capnocytophaga
           sputigena Capno]
          Length = 502

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 85/183 (46%), Gaps = 16/183 (8%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           I++ +   ++  R+Q   L +++      E  +        + E F    PL T+ED +P
Sbjct: 18  IDQIQEFVENPHRVQERVLLELISNAKDTELGKLYNFAEVKNYEQFARETPLTTYEDFEP 77

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTS------Y 127
           Y++R   G+ + +    PI   ++SSGTT  K KF+P ++E ++  L  +++       Y
Sbjct: 78  YVERARRGERN-VFWHTPIKWFAKSSGTTNAKSKFIPVSEEALQ--LCHYKSGKDMLCLY 134

Query: 128 AFRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPD 187
              N +  + KGK+L+ + GSKQ   + G   G  +  +  +  F AE        C+P 
Sbjct: 135 LNNNEDSNLFKGKSLR-LGGSKQLYEQNGTYFGDLSAILIENLPFWAEW------SCTPS 187

Query: 188 EVI 190
             +
Sbjct: 188 NKV 190


>gi|395218492|ref|ZP_10402138.1| gh3 auxin-responsive promoter [Pontibacter sp. BAB1700]
 gi|394454371|gb|EJF09043.1| gh3 auxin-responsive promoter [Pontibacter sp. BAB1700]
          Length = 499

 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 56/104 (53%), Gaps = 1/104 (0%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           I + +   K    +Q E  + ++    + E+ +  G       ++F+  VP+ T+EDL P
Sbjct: 5   IHDIDLFRKYPHEVQNELFQDLISTAKNTEFGKKYGFGDMKSVKTFQERVPIATYEDLYP 64

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
           YI+R++ G+ + IL    I   ++SSGTT  + KF+P + E +E
Sbjct: 65  YIERVMKGEQN-ILWPSKIEWFAKSSGTTNARSKFIPVSPESLE 107


>gi|333029519|ref|ZP_08457580.1| GH3 auxin-responsive promoter [Bacteroides coprosuis DSM 18011]
 gi|332740116|gb|EGJ70598.1| GH3 auxin-responsive promoter [Bacteroides coprosuis DSM 18011]
          Length = 502

 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 57/104 (54%), Gaps = 1/104 (0%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           ++E E  T  A  IQ +  R +L++  + E+ +          E FKS VPL T+E+++P
Sbjct: 15  LKEIELYTTQAGEIQFKVFRHLLKKAENTEWGKMYDYKSIKSYEDFKSRVPLQTYEEIKP 74

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
           Y+ R+  G+   +L    I   ++SSGTT  K KFLP + E ++
Sbjct: 75  YVSRLRAGE-QNLLWPSEIRWFAKSSGTTNDKSKFLPVSKESLK 117


>gi|120434611|ref|YP_860301.1| hypothetical protein GFO_0242 [Gramella forsetii KT0803]
 gi|117576761|emb|CAL65230.1| conserved hypothetical protein, auxin-inducible GH3 family
           [Gramella forsetii KT0803]
          Length = 503

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 81/176 (46%), Gaps = 6/176 (3%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           I + E   K    +Q E L+ ++ +  + E+ +    N     E F+  VP+  +ED QP
Sbjct: 18  IHQMELFMKYPHEVQNELLKDLISKAKNTEFGKRYYFNEINSYEKFRERVPIQKYEDYQP 77

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME----TTLQIFRTSYAF 129
            I+R   G+ + IL   PI   ++SSGTT  K KF+P + + +E       +     Y  
Sbjct: 78  DIERSRKGE-NNILWPTPIRWFAKSSGTTSAKSKFIPVSQDSLEDCHFAAGKDLLCIYLN 136

Query: 130 RNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCS 185
            N +     GK+L+ + GSK+   + G + G  +  +  +  F AE  +  S   S
Sbjct: 137 NNPQSQFFTGKSLR-LGGSKELYQENGTSYGDLSAILIDNMPFWAEFSSTPSNEVS 191


>gi|196229211|ref|ZP_03128076.1| GH3 auxin-responsive promoter [Chthoniobacter flavus Ellin428]
 gi|196226443|gb|EDY20948.1| GH3 auxin-responsive promoter [Chthoniobacter flavus Ellin428]
          Length = 537

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/234 (23%), Positives = 98/234 (41%), Gaps = 9/234 (3%)

Query: 25  ERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDIS 84
           E  QR+ L +++  NA + Y +  G       E F   VP+V ++ L+P++ RI DG+ S
Sbjct: 31  ESTQRDVLARLIAINADSAYGRAHGFAKVRSYEDFCRRVPIVDYDTLEPWVTRIRDGE-S 89

Query: 85  PILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP-IGKGKALQ 143
            +LT +P+  +  +SG++ G  K +PF   L  +             R++P I  G A  
Sbjct: 90  NVLTDEPVARLVPTSGSS-GARKLIPFTRGLQRSFNAAIGAWMLDLVRQYPSITWGPAYW 148

Query: 144 FIYG--SKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQSLYC 201
            I    S  ++    +  G    + Y         + +++   +P  +    D     Y 
Sbjct: 149 SISPAISAGAEESAAVPIGFDDDSAYLGGI---RQRLVEATFAAPSALRLAADTDSFRYA 205

Query: 202 HLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPS 255
            LLC L+ + E++L+       L   +      W EL  D+  G    R   P+
Sbjct: 206 TLLC-LLRQPELRLISVWHPSFLTLLWDALSNGWNELVADVASGDCQCRDAFPA 258


>gi|443726573|gb|ELU13692.1| hypothetical protein CAPTEDRAFT_73892, partial [Capitella teleta]
          Length = 303

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 96/206 (46%), Gaps = 13/206 (6%)

Query: 196 HQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPS 255
           H+  Y   L  L   + +Q +    A   +  FRT E   ++L  D+R G L   + V  
Sbjct: 49  HKQCYVTALFCLA-EKNLQYIDGMMAPMCLTFFRTMEQNSDQLVSDLRTGRLFEGLEVDD 107

Query: 256 -IRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLR 314
            +R  +++ LK +P  AD + K+    S    L   L+P  + +S   TG  E   + LR
Sbjct: 108 DVRRTVNEHLKADPRRADEVQKEFHKGSE--SLASRLWPCLRIVSMTTTGEFEVTARLLR 165

Query: 315 -HYAGDLPLMSADYGSSEGWIGA--NVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQ 371
             +  ++ +M A +G++E   G   + +     E   +A   +  +FEFIP+     E+ 
Sbjct: 166 ASFLKEVFIMCAAHGATEANCGVVPDASKDSVAETPKYAFSHSTTFFEFIPEENIGEEN- 224

Query: 372 VLCIEPKPVGLTEVKVGEEYEIIVTN 397
                PK + L +++ G+ YE++VTN
Sbjct: 225 -----PKTLFLDQLEKGQSYELVVTN 245


>gi|410027924|ref|ZP_11277760.1| GH3 auxin-responsive promoter-binding protein [Marinilabilia sp.
           AK2]
          Length = 505

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 51/92 (55%), Gaps = 1/92 (1%)

Query: 26  RIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISP 85
           ++Q ET   ++ E    E+ +  G       + F + VP+ ++ED+QPY +RI+ G+   
Sbjct: 28  KVQEETFHYLIAEAKRTEFGKQHGFQNIKKYQDFAARVPVQSYEDMQPYFERILKGE-QN 86

Query: 86  ILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
           +L    I   S+SSGTT  + K++P + E +E
Sbjct: 87  VLWPSEILWFSKSSGTTSSRSKYIPVSKEALE 118


>gi|357060985|ref|ZP_09121746.1| hypothetical protein HMPREF9332_01303 [Alloprevotella rava F0323]
 gi|355375210|gb|EHG22498.1| hypothetical protein HMPREF9332_01303 [Alloprevotella rava F0323]
          Length = 502

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 1/97 (1%)

Query: 23  DAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGD 82
           DAE IQR+ L ++L E A   Y ++ G       E F   VP+ T+E+L+ +I R+  G+
Sbjct: 24  DAEEIQRKVLARLLREAAQTAYGRDHGFGEIRSYEEFSRTVPVNTYEELKGFIDRMRHGE 83

Query: 83  ISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETT 119
              +  G+ +   ++SSGTT  K KF+P +   +  T
Sbjct: 84  RDVLWKGR-VEWYAKSSGTTNDKSKFIPVSSAGLHDT 119


>gi|295086174|emb|CBK67697.1| GH3 auxin-responsive promoter. [Bacteroides xylanisolvens XB1A]
          Length = 508

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 57/107 (53%), Gaps = 1/107 (0%)

Query: 11  DELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHED 70
           D  +++ +     A  IQ   L ++  + A  E+ +    +   + E F+  VP+ T+E+
Sbjct: 12  DSRLKQIDLYASQASEIQHRVLSRLTRQAAQTEWGRKYDYSSIRNYEDFRKRVPIQTYEE 71

Query: 71  LQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
           ++PY++R+  G+   +L    I   ++SSGTT  K KFLP + E +E
Sbjct: 72  IKPYVERLRAGE-QNLLWPSEIRWFAKSSGTTNDKSKFLPVSKEALE 117


>gi|262197944|ref|YP_003269153.1| GH3 auxin-responsive promoter [Haliangium ochraceum DSM 14365]
 gi|262081291|gb|ACY17260.1| GH3 auxin-responsive promoter [Haliangium ochraceum DSM 14365]
          Length = 581

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 94/380 (24%), Positives = 146/380 (38%), Gaps = 57/380 (15%)

Query: 28  QRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPIL 87
           Q   L  IL  NA  EY +  G  G T    F+  VP+ ++E L P+I+R   G  + +L
Sbjct: 49  QEALLGSILAANADTEYGRAHGFAGITGAAGFQDRVPIASYETLAPHIERAAQGRPA-VL 107

Query: 88  TGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYA------FRNREFPIGKGKA 141
           T +P+    RS G+TQ   K +P+   L    L+ F  + A       R     IG+   
Sbjct: 108 TREPVRMFERSGGSTQ-TTKLIPYTAGL----LREFSAATAPWLYDLHRGHPRLIGRRSY 162

Query: 142 LQFIYGSK-QSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQSLY 200
                 ++ +  T GG+  G      Y  +   AE  A++     P EV    D      
Sbjct: 163 WSVSAATRGRETTAGGIPIGFDDDTDYFGA---AERFALRQLMAVPGEVGRLRDVDAWRR 219

Query: 201 CHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPSIRAAM 260
              L GL+  E++  V       L    R  E  W EL              +P+ RAA 
Sbjct: 220 ATAL-GLLAAEDLGFVSVWSPTFLTGLMRYMEQHWRELAS-----------ALPTRRAAA 267

Query: 261 SKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRHYAGDL 320
                        I +      ++ G    L+P+   LS    G   H L  LR Y  D 
Sbjct: 268 -------------IARGLDAAGSFVGRA--LWPHLALLSCWCDGPSRHVLGDLRGYFPDT 312

Query: 321 PLMSADYGSSEGWIGAN-VNPSLPPELAT--FAVLPNIGYFEFIPQRLGNLESQVLCIEP 377
           P+      ++EG +       +L  + A    AV  ++   EF+     +LE+     + 
Sbjct: 313 PVQPKGLLATEGVVSIPFAGDALDGDRAGGPLAVCSHV--LEFL-----DLENP----DA 361

Query: 378 KPVGLTEVKVGEEYEIIVTN 397
           +P+   E++VG  Y  ++T 
Sbjct: 362 RPLWADELRVGGRYSPLLTT 381


>gi|423214795|ref|ZP_17201323.1| hypothetical protein HMPREF1074_02855 [Bacteroides xylanisolvens
           CL03T12C04]
 gi|392692058|gb|EIY85296.1| hypothetical protein HMPREF1074_02855 [Bacteroides xylanisolvens
           CL03T12C04]
          Length = 508

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 57/107 (53%), Gaps = 1/107 (0%)

Query: 11  DELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHED 70
           D  +++ +     A  IQ   L ++  + A  E+ +    +   + E F+  VP+ T+E+
Sbjct: 12  DSRLKQIDLYASQASEIQHRVLSRLTRQAAQTEWGRKYDYSSIRNYEDFRKRVPIQTYEE 71

Query: 71  LQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
           ++PY++R+  G+   +L    I   ++SSGTT  K KFLP + E +E
Sbjct: 72  IKPYVERLRAGE-QNLLWPSEIRWFAKSSGTTNDKSKFLPVSKEALE 117


>gi|298480487|ref|ZP_06998684.1| GH3 auxin-responsive promoter family protein [Bacteroides sp. D22]
 gi|298273308|gb|EFI14872.1| GH3 auxin-responsive promoter family protein [Bacteroides sp. D22]
          Length = 508

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 57/107 (53%), Gaps = 1/107 (0%)

Query: 11  DELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHED 70
           D  +++ +     A  IQ   L ++  + A  E+ +    +   + E F+  VP+ T+E+
Sbjct: 12  DSRLKQIDLYASQASEIQHRVLSRLTRQAAQTEWGRKYDYSSIRNYEDFRKRVPIQTYEE 71

Query: 71  LQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
           ++PY++R+  G+   +L    I   ++SSGTT  K KFLP + E +E
Sbjct: 72  IKPYVERLRAGE-QNLLWPSEIRWFAKSSGTTNDKSKFLPVSKEALE 117


>gi|237720471|ref|ZP_04550952.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|293368879|ref|ZP_06615482.1| GH3 auxin-responsive promoter [Bacteroides ovatus SD CMC 3f]
 gi|336403710|ref|ZP_08584420.1| hypothetical protein HMPREF0127_01733 [Bacteroides sp. 1_1_30]
 gi|229450222|gb|EEO56013.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|292636028|gb|EFF54517.1| GH3 auxin-responsive promoter [Bacteroides ovatus SD CMC 3f]
 gi|335945202|gb|EGN07016.1| hypothetical protein HMPREF0127_01733 [Bacteroides sp. 1_1_30]
          Length = 508

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 57/107 (53%), Gaps = 1/107 (0%)

Query: 11  DELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHED 70
           D  +++ +     A  IQ   L ++  + A  E+ +    +   + E F+  VP+ T+E+
Sbjct: 12  DSRLKQIDLYANQASEIQHRVLSRLTRQAAQTEWGRKYDYSSIRNYEDFRKRVPIQTYEE 71

Query: 71  LQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
           ++PY++R+  G+   +L    I   ++SSGTT  K KFLP + E +E
Sbjct: 72  IKPYVERLRAGE-QNLLWPSEIRWFAKSSGTTNDKSKFLPVSKEALE 117


>gi|340350246|ref|ZP_08673243.1| GH3 auxin-responsive promoter family protein [Prevotella nigrescens
           ATCC 33563]
 gi|339608977|gb|EGQ13858.1| GH3 auxin-responsive promoter family protein [Prevotella nigrescens
           ATCC 33563]
          Length = 505

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 90/392 (22%), Positives = 162/392 (41%), Gaps = 80/392 (20%)

Query: 16  EFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYI 75
           E E    + E +Q E L+ +++     EY +    +   +   F   +PL T+E+L+ YI
Sbjct: 18  ELERYINEGEEMQHEILQYLVKRGKDTEYGRKYLFSTINNYNDFAQNIPLNTYEELKGYI 77

Query: 76  QRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP 135
            R+  G+ + +  G+ +   ++SSGTT  K KF+P   E               +N  + 
Sbjct: 78  DRMRHGERNILWPGQ-VKWYAKSSGTTNDKSKFIPITHE-------------GLQNVHYQ 123

Query: 136 IGKGKALQFIYGSKQSKT---KGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFG 192
            GK     ++  +  SK    KG +  G+ + N   S++   ++ A+  +  +P      
Sbjct: 124 GGKDVLAYYLSNNPDSKLFSGKGLILGGSHSPNYNLSNSLVGDLSAILIENINP------ 177

Query: 193 PDFHQSLYCHLLCGLIF--REEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSR 250
                      L  L+    +E+ L+ S F               E   D I   VLS  
Sbjct: 178 -----------LANLVRVPSKEVALL-SDF---------------EVKRDKIAREVLSQN 210

Query: 251 IT-VPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAK--YLSGI-MTGSM 306
           +T +  + + M  +L    EL+   H            + E++PN +  +  GI  T   
Sbjct: 211 VTNISGVPSWMLSVLVRVMELSGKKH------------LQEVWPNLEVFFHGGIAFTPYR 258

Query: 307 EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLG 366
           E Y + +     D+  M   Y +SEG+ G   +P+   + +   +L    Y+EF+P  + 
Sbjct: 259 EQYEQLIT--KQDMHYMEI-YNASEGFFGIQDDPN---DKSMLLMLDYGVYYEFLP--MD 310

Query: 367 NLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV 398
             E++    +P  V L  V+VG  Y +I++ V
Sbjct: 311 EFENE----KPNIVPLEGVEVGRNYAMIISTV 338


>gi|262405517|ref|ZP_06082067.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|294646344|ref|ZP_06723991.1| GH3 auxin-responsive promoter [Bacteroides ovatus SD CC 2a]
 gi|294806679|ref|ZP_06765510.1| GH3 auxin-responsive promoter [Bacteroides xylanisolvens SD CC 1b]
 gi|345510702|ref|ZP_08790265.1| hypothetical protein BSAG_00225 [Bacteroides sp. D1]
 gi|229442724|gb|EEO48515.1| hypothetical protein BSAG_00225 [Bacteroides sp. D1]
 gi|262356392|gb|EEZ05482.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|292638299|gb|EFF56670.1| GH3 auxin-responsive promoter [Bacteroides ovatus SD CC 2a]
 gi|294446099|gb|EFG14735.1| GH3 auxin-responsive promoter [Bacteroides xylanisolvens SD CC 1b]
          Length = 508

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 57/107 (53%), Gaps = 1/107 (0%)

Query: 11  DELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHED 70
           D  +++ +     A  IQ   L ++  + A  E+ +    +   + E F+  VP+ T+E+
Sbjct: 12  DSRLKQIDLYASQASEIQHRVLSRLTRQAAQTEWGRKYDYSSIRNYEDFRKRVPIQTYEE 71

Query: 71  LQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
           ++PY++R+  G+   +L    I   ++SSGTT  K KFLP + E +E
Sbjct: 72  IKPYVERLRAGE-QNLLWPSEIRWFAKSSGTTNDKSKFLPVSKEALE 117


>gi|160883985|ref|ZP_02064988.1| hypothetical protein BACOVA_01959 [Bacteroides ovatus ATCC 8483]
 gi|423290676|ref|ZP_17269525.1| hypothetical protein HMPREF1069_04568 [Bacteroides ovatus
           CL02T12C04]
 gi|156110715|gb|EDO12460.1| GH3 auxin-responsive promoter [Bacteroides ovatus ATCC 8483]
 gi|392665329|gb|EIY58857.1| hypothetical protein HMPREF1069_04568 [Bacteroides ovatus
           CL02T12C04]
          Length = 508

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 57/107 (53%), Gaps = 1/107 (0%)

Query: 11  DELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHED 70
           D  +++ +     A  IQ   L ++  + A  E+ +    +   + E F+  VP+ T+E+
Sbjct: 12  DSRLKQIDLYASQASEIQHRVLSRLTRQAAQTEWGRKYDYSSIRNYEDFRKRVPIQTYEE 71

Query: 71  LQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
           ++PY++R+  G+   +L    I   ++SSGTT  K KFLP + E +E
Sbjct: 72  IKPYVERLRAGE-QNLLWPSEIRWFAKSSGTTNDKSKFLPVSKEALE 117


>gi|374983765|ref|YP_004959260.1| hypothetical protein SBI_01008 [Streptomyces bingchenggensis BCW-1]
 gi|297154417|gb|ADI04129.1| hypothetical protein SBI_01008 [Streptomyces bingchenggensis BCW-1]
          Length = 595

 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 84/384 (21%), Positives = 152/384 (39%), Gaps = 44/384 (11%)

Query: 28  QRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPIL 87
           QRE L  +L  NA   Y +  G +     +  +  VP+  +  L P+I+R+ +G+ + +L
Sbjct: 68  QREVLTDLLTFNAGTAYGKAHGFDRLRTLDDLRKAVPVQDYAALSPWIERMAEGEPN-VL 126

Query: 88  TGKPITTISRSSGTTQGKPKFLPFNDELMETT-LQIFRTSYAFRNREFP--IGKGKALQF 144
           T         SSG+T G  K +P     M TT    +  ++A     FP  + +  A+  
Sbjct: 127 TADQPAVFFTSSGST-GAHKKIPVTPRFMRTTFFPFYYAAWAPMAEHFPDVLTRPDAVLN 185

Query: 145 IYG----SKQSKTKGGLNAGTATTNVYR--SSTFKAEMKAMQSQCCSPDEVIFGPDFH-Q 197
           +      +  +   G  + G +  +  +       AE          P  V   PD H +
Sbjct: 186 LKHDPVVAPATTASGRPHVGASQVDFGKMFGEHLSAEPGTAAPWATLP--VPVAPDDHVE 243

Query: 198 SLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPSIR 257
            +Y  L   +    +++ V       +        L W  +  D+R+G L          
Sbjct: 244 KMYLRLR--MAVESDVRCVIGINPAMVAAVPYQLRLWWPRIVKDVRDGTLGG-------- 293

Query: 258 AAMSKILKPNPELADLIHKKCSGLSNWYGLI--PELFPNAKYLSGIMTGSMEHYLKKLRH 315
                   PNP+ A  + +    L++++G +    ++PN + L    TG    YL +LR 
Sbjct: 294 ---HPFRSPNPQRAAELER----LASYFGTVRPAHIWPNMRLLFCWTTGLASLYLPRLRE 346

Query: 316 YAG-DLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLC 374
             G  +  + A   +SEG +G  ++    P   +  V  ++  +EF+     +L   V  
Sbjct: 347 EFGPSVTALPAPVAASEGPVGVALDRH--PTAGSLVVTASV--YEFVDADR-DLGPDVET 401

Query: 375 IEPKPVGLTEVKVGEEYEIIVTNV 398
           + P      E++ G EY  I ++V
Sbjct: 402 LAPH-----ELEPGREYHAIYSHV 420


>gi|108763914|ref|YP_635238.1| hypothetical protein MXAN_7125 [Myxococcus xanthus DK 1622]
 gi|108467794|gb|ABF92979.1| conserved hypothetical protein [Myxococcus xanthus DK 1622]
          Length = 555

 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 68/287 (23%), Positives = 120/287 (41%), Gaps = 18/287 (6%)

Query: 16  EFETITKDAERIQRETLRKILEENASAEYLQNL-GLNGRTDPESFKSCVPLVTHEDLQPY 74
            F    +  E  Q   L+++L     +   + + G +  +D   F++ VP VT + L P 
Sbjct: 21  RFYRALRHPEAAQAVCLQRVLRSAVGSVQAERIPGFHRISDARDFQAAVPWVTPDALTPD 80

Query: 75  IQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELM-ETTLQIFRTSYAFRNRE 133
           ++RI  G+ + +LT +P+     S G++ G  K +P    L+ E    +    +   +R 
Sbjct: 81  VERIAAGE-ARVLTREPVLRFELSGGSS-GASKRVPMTRGLLAEFQRALAPMLFELLHRR 138

Query: 134 FPIGKGKALQFI--YGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCS-PDEVI 190
             + +G +   I     KQ +T GG+  G+A  + Y    F   ++ + S+  + P EV 
Sbjct: 139 PALREGASYWSISPLARKQVRTAGGIPVGSAEDSAY----FSRVLRPLLSRIFAVPGEVG 194

Query: 191 FGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREG----- 245
             PD     Y   L  L+ RE++ L+       L       E   E L DD+  G     
Sbjct: 195 ALPDVESCRYV-TLWHLVAREDLSLISVWNPSFLTLLMDALERHGERLADDLMRGHCRPP 253

Query: 246 VLSSRITVPSIRAAMSKI-LKPNPELADLIHKKCSGLSNWYGLIPEL 291
              +     + +A + ++   P PE A L+ +   G  +   L P L
Sbjct: 254 ASGAAYDEAATQAVLDRMRFSPRPERASLLREVLRGGWSARALWPRL 300


>gi|423315897|ref|ZP_17293802.1| hypothetical protein HMPREF9699_00373 [Bergeyella zoohelcum ATCC
           43767]
 gi|405585613|gb|EKB59437.1| hypothetical protein HMPREF9699_00373 [Bergeyella zoohelcum ATCC
           43767]
          Length = 507

 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 1/108 (0%)

Query: 10  VDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHE 69
           + + I++ +   +     QR  L   L      EY +  G +  +  E FK+ VP+V++E
Sbjct: 15  IKQRIDQIQNFMRHPIDTQRGILFSQLYHAEDTEYGKLHGFSSISSYEDFKNQVPIVSYE 74

Query: 70  DLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
           D +PYI+R   G  + I  G  I   ++SSGTT  K KF+P   + +E
Sbjct: 75  DFEPYIERARQGQKNIIWPG-AIKNFAKSSGTTNAKSKFIPITQDSLE 121


>gi|255692901|ref|ZP_05416576.1| GH3 auxin-responsive promoter family protein [Bacteroides
           finegoldii DSM 17565]
 gi|260621350|gb|EEX44221.1| GH3 auxin-responsive promoter [Bacteroides finegoldii DSM 17565]
          Length = 502

 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 59/107 (55%), Gaps = 1/107 (0%)

Query: 11  DELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHED 70
           D  +++ +    +A  IQ   L +++++ +  E+ +    +     E F+  +P+ T+E+
Sbjct: 12  DSRLKQIDLYASEASEIQHRVLNRLVQQASQTEWGKKYDYSSIRSYEDFRKRLPIQTYEE 71

Query: 71  LQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
           ++PY++R+  G+   +L    I   ++SSGTT  K KFLP + E +E
Sbjct: 72  IKPYVERLRAGE-QNLLWPSEIRWFAKSSGTTNDKSKFLPVSQEALE 117


>gi|406672619|ref|ZP_11079844.1| hypothetical protein HMPREF9700_00386 [Bergeyella zoohelcum CCUG
           30536]
 gi|405587163|gb|EKB60891.1| hypothetical protein HMPREF9700_00386 [Bergeyella zoohelcum CCUG
           30536]
          Length = 507

 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 1/108 (0%)

Query: 10  VDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHE 69
           + + I++ +   +     QR  L   L      EY +  G +  +  E FK+ VP+V++E
Sbjct: 15  IKQRIDQIQNFMRHPIDTQRGILFSQLYHAEDTEYGKLHGFSSISSYEDFKNQVPIVSYE 74

Query: 70  DLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
           D +PYI+R   G  + I  G  I   ++SSGTT  K KF+P   + +E
Sbjct: 75  DFEPYIERARQGQKNIIWPG-AIKNFAKSSGTTNAKSKFIPITQDSLE 121


>gi|332881434|ref|ZP_08449084.1| GH3 auxin-responsive promoter [Capnocytophaga sp. oral taxon 329
           str. F0087]
 gi|357045151|ref|ZP_09106788.1| GH3 auxin-responsive promoter [Paraprevotella clara YIT 11840]
 gi|332680810|gb|EGJ53757.1| GH3 auxin-responsive promoter [Capnocytophaga sp. oral taxon 329
           str. F0087]
 gi|355531734|gb|EHH01130.1| GH3 auxin-responsive promoter [Paraprevotella clara YIT 11840]
          Length = 509

 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 58/106 (54%), Gaps = 4/106 (3%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           I ++E  T   E +Q + L+K++ +    E+ Q  G     D  SF    P+ T+E+L+ 
Sbjct: 18  ISKYENQT---EELQSKVLQKLIRQTIHTEWGQTHGFAQVNDYNSFTKTSPINTYEELKG 74

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETT 119
           YI R+  G+   + +GK +   ++SSGTT  K KF+P + E ++ T
Sbjct: 75  YIDRMRRGEKDVLWSGK-VRWYAKSSGTTNDKSKFIPVSKECLQDT 119


>gi|260910720|ref|ZP_05917379.1| GH3 auxin-responsive promoter family protein [Prevotella sp. oral
           taxon 472 str. F0295]
 gi|260635230|gb|EEX53261.1| GH3 auxin-responsive promoter family protein [Prevotella sp. oral
           taxon 472 str. F0295]
          Length = 501

 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/174 (22%), Positives = 80/174 (45%), Gaps = 17/174 (9%)

Query: 16  EFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYI 75
           + E    ++E IQR  L  ++++    +Y +  G+NG    E F + +P+ T+E+L+  I
Sbjct: 17  DIEAYAHNSEEIQRRVLAHLVKQGQRTQYGKTWGMNGMQTYEHFANGLPVTTYEELKEPI 76

Query: 76  QRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP 135
            R+  G+   +  G  +   ++SSGTT  K KF+P + E               +N  + 
Sbjct: 77  DRMRHGEADVLWPG-VVKWYAKSSGTTNDKSKFIPVSAE-------------GLKNIHYK 122

Query: 136 IGKGKALQFIYGSKQSKTKGGLN---AGTATTNVYRSSTFKAEMKAMQSQCCSP 186
            GK     ++  + +SK   G +    G+  +N   + +   ++ A+  +  +P
Sbjct: 123 GGKDAVALYLRNNPKSKLFDGRSLILGGSHASNYNVAHSLVGDLSAILIENINP 176


>gi|347536092|ref|YP_004843517.1| hypothetical protein FBFL15_1195 [Flavobacterium branchiophilum
           FL-15]
 gi|345529250|emb|CCB69280.1| Protein of unknown function [Flavobacterium branchiophilum FL-15]
          Length = 504

 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 72/136 (52%), Gaps = 6/136 (4%)

Query: 28  QRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPIL 87
           Q++  + +++E  +  + +    +   + + F + VP+  +E+++PYI++II G    + 
Sbjct: 30  QQKVFKSLIKEATNTTFGKKHHFSNIKNYDDFVNQVPINDYEEIKPYIEKIIAGQKDVLW 89

Query: 88  TGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRT---SYAFRNREFPIGKGKALQF 144
            GKP+   +++SGTT G  K++P   E +   +Q  R    SY +  ++     GK + F
Sbjct: 90  KGKPL-YFAKTSGTTSG-AKYIPLTKESLPYHIQAARNAILSYIYHTKKSKFVDGKMI-F 146

Query: 145 IYGSKQSKTKGGLNAG 160
           + GS +   K G+N G
Sbjct: 147 LQGSPELHQKNGINFG 162


>gi|260060597|ref|YP_003193677.1| plant auxin-regulated protein [Robiginitalea biformata HTCC2501]
 gi|88784727|gb|EAR15896.1| putative plant auxin-regulated protein [Robiginitalea biformata
           HTCC2501]
          Length = 509

 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 10/176 (5%)

Query: 16  EFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYI 75
           + E   K    +Q+E L  +LE     E  Q  G  G T  E++   VPLVT+E+ +P I
Sbjct: 20  QIELFLKYPGEVQQEVLTNLLEFAEETEIGQQYGFEGITSYEAYAGRVPLVTYEEFEPLI 79

Query: 76  QRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTS------YAF 129
           +R   G+ + +     I   ++SSGTT  + KF+P + E +E     F++       Y  
Sbjct: 80  ERTRRGEQN-LFWPTEIRWFAKSSGTTNARSKFIPVSSEALEDCH--FKSGKDMLCLYLN 136

Query: 130 RNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCS 185
            N    +  GK+L+ + GSK+     G   G  +  +  +  F AE+ +  S   S
Sbjct: 137 NNPNSQLFTGKSLR-LGGSKELYEDNGTYFGDLSAILIDNLPFWAELSSTPSNKVS 191


>gi|423220506|ref|ZP_17207001.1| hypothetical protein HMPREF1061_03774 [Bacteroides caccae
           CL03T12C61]
 gi|392623583|gb|EIY17686.1| hypothetical protein HMPREF1061_03774 [Bacteroides caccae
           CL03T12C61]
          Length = 506

 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 57/107 (53%), Gaps = 1/107 (0%)

Query: 11  DELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHED 70
           D  +++ +     A  IQ   L +++ + A  E+ +    +     E F+  VP+ T+E+
Sbjct: 12  DSRLKQIDLYATQASEIQHSVLNRLVHQAAQTEWGKKYDYSSIRSYEDFRKRVPIQTYEE 71

Query: 71  LQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
           ++PY++R+  G+   +L    I   ++SSGTT  K KFLP + E ++
Sbjct: 72  IKPYVERLRAGE-QNLLWPSEIRWFAKSSGTTNDKSKFLPVSKEALQ 117


>gi|393782413|ref|ZP_10370597.1| hypothetical protein HMPREF1071_01465 [Bacteroides salyersiae
           CL02T12C01]
 gi|392673241|gb|EIY66704.1| hypothetical protein HMPREF1071_01465 [Bacteroides salyersiae
           CL02T12C01]
          Length = 503

 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 42/176 (23%), Positives = 83/176 (47%), Gaps = 17/176 (9%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           ++E +     A  IQ   + +++ + A+ E+ +        + E FKS +P+ T+++++P
Sbjct: 15  LKEIDLYASQAGEIQHRVMTRLVNQAANTEWGKKYDYKSIRNYEEFKSRIPVQTYDEIKP 74

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNRE 133
           Y++R+  G+   +L    I   ++SSGTT  K KFLP + E             A ++  
Sbjct: 75  YVERLRAGE-QNLLWPSEIRWFAKSSGTTNDKSKFLPVSKE-------------ALQDIH 120

Query: 134 FPIGKGKALQFIYGSKQS---KTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSP 186
           +  GK  A  +   +  S     KG +  G+ + N+  + +   ++ A+  Q  SP
Sbjct: 121 YRGGKDAAALYFRINPDSHFFSGKGLILGGSHSPNLNSNHSLVGDLSAILIQNVSP 176


>gi|429752917|ref|ZP_19285749.1| GH3 auxin-responsive promoter [Capnocytophaga sp. oral taxon 326
           str. F0382]
 gi|429175507|gb|EKY16947.1| GH3 auxin-responsive promoter [Capnocytophaga sp. oral taxon 326
           str. F0382]
          Length = 505

 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 83/179 (46%), Gaps = 16/179 (8%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           I++ +    D  R+Q   L +++      E  +        + + F    PL T+E+ +P
Sbjct: 18  IDQIQEFVLDPHRVQERVLLELISNAKDTELGKQYNFAEVKNYQQFVRETPLTTYENFEP 77

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTS------Y 127
           Y++R   G+ + +    PI   ++SSGTT  K KF+P ++E ++  L  +++       Y
Sbjct: 78  YVERARRGERN-VFWHTPIKWFAKSSGTTNAKSKFIPVSEEALQ--LCHYKSGKDMLCLY 134

Query: 128 AFRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSP 186
              N +  + KGK+L+ + GSKQ   + G   G  +  +  +  F AE        C+P
Sbjct: 135 LNNNEDSNLFKGKSLR-LGGSKQLYEQNGTYFGDLSAILIENLPFWAEW------SCTP 186


>gi|313675544|ref|YP_004053540.1| gh3 auxin-responsive promoter [Marivirga tractuosa DSM 4126]
 gi|312942242|gb|ADR21432.1| GH3 auxin-responsive promoter [Marivirga tractuosa DSM 4126]
          Length = 507

 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 56/104 (53%), Gaps = 1/104 (0%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           I E E   K    +Q E L+K++    + ++ +        + + ++  VPL T+E+L P
Sbjct: 16  IHEVELFMKYPNEMQSEVLQKLIYRARNTKFGREYQFEDLKNFQQYQERVPLHTYEELFP 75

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
           YI +++ GD   IL    I   S+SSGTT  + KF+P +DE +E
Sbjct: 76  YIDQLLKGD-QNILWPTEIRWFSKSSGTTNDRSKFIPVSDEALE 118


>gi|163753145|ref|ZP_02160269.1| putative auxin-regulated protein [Kordia algicida OT-1]
 gi|161326877|gb|EDP98202.1| putative auxin-regulated protein [Kordia algicida OT-1]
          Length = 506

 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 1/104 (0%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           I + E    +   +Q E L  ++      E  +       TD ++F   +P+  +ED+QP
Sbjct: 18  ISQIELFLSNPNEVQLELLMSLITTAKKTEIGKQYDFASITDYKTFSERIPVTRYEDIQP 77

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
            I+R   G+ S I   KPI   ++SSGTT  K KF+P +D+ +E
Sbjct: 78  MIERSRKGE-SNIFWPKPIKWFAKSSGTTNAKSKFIPVSDDSLE 120


>gi|408489787|ref|YP_006866156.1| GH3 auxin-responsive promoter-like protein [Psychroflexus torquis
           ATCC 700755]
 gi|408467062|gb|AFU67406.1| GH3 auxin-responsive promoter-like protein [Psychroflexus torquis
           ATCC 700755]
          Length = 505

 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 74/151 (49%), Gaps = 6/151 (3%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           I   E   K    +Q E L  ++ +  + E+ +    +G  + ++FK  +P+  +EDL+P
Sbjct: 18  IHHMELFKKHPNEVQNELLMDLVYKAQNTEFGKKYRFHGIKNYDTFKERLPIQVYEDLEP 77

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME----TTLQIFRTSYAF 129
             +R   G+ S ++   PIT  ++SSGTT  K KF+P + E +E       +     Y  
Sbjct: 78  TFERSRRGE-SNLIWPTPITMFAKSSGTTSAKSKFIPVSQESLEDCHYAASKDLLCIYLN 136

Query: 130 RNREFPIGKGKALQFIYGSKQSKTKGGLNAG 160
            N +  +  GK+L+ + GSK+     G + G
Sbjct: 137 NNPDSKLFTGKSLR-LGGSKEIYQSNGTSYG 166


>gi|167751847|ref|ZP_02423974.1| hypothetical protein ALIPUT_00089 [Alistipes putredinis DSM 17216]
 gi|167660088|gb|EDS04218.1| GH3 auxin-responsive promoter [Alistipes putredinis DSM 17216]
          Length = 472

 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 56/101 (55%), Gaps = 1/101 (0%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           ++  +   +  +++Q E  R+++   A  E+ +  G+     PE+F + V +  +E  +P
Sbjct: 1   MKAIDRFRRHPDQVQAEMFRQLIARGADTEFGRRHGVAKHLTPEAFAARVGVQDYESFKP 60

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDE 114
           YI+R++ G+ +    G+ +T  +RSSGTT  + KF+P   E
Sbjct: 61  YIERMLAGEKNVAAPGR-VTLFARSSGTTSDRSKFIPVTRE 100


>gi|149279020|ref|ZP_01885154.1| auxin-regulated protein [Pedobacter sp. BAL39]
 gi|149230299|gb|EDM35684.1| auxin-regulated protein [Pedobacter sp. BAL39]
          Length = 508

 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 55/104 (52%), Gaps = 1/104 (0%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           + + E   K    +Q E   K++   A  E+ +       ++P  FK  VP+  +E L+P
Sbjct: 16  VHQIELFMKYPHDVQEEWFEKLISSAADTEWGRKYDYESISNPRQFKERVPIQNYETLKP 75

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
           +I+R++ G+   IL    I   ++SSGTT  + KF+P ++E ++
Sbjct: 76  FIERMLRGE-QNILWPTEIKWFAKSSGTTSDRSKFIPVSEESLQ 118


>gi|327403038|ref|YP_004343876.1| GH3 auxin-responsive promoter [Fluviicola taffensis DSM 16823]
 gi|327318546|gb|AEA43038.1| GH3 auxin-responsive promoter [Fluviicola taffensis DSM 16823]
          Length = 510

 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 29/108 (26%), Positives = 56/108 (51%), Gaps = 1/108 (0%)

Query: 10  VDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHE 69
           + + + + E   K  E +Q E   K++E  + +E+ +    +  T  E F   VPL  ++
Sbjct: 11  IKKRLHQIELFRKYPENVQHELFEKLIENGSQSEFGRKYNFSQITSYEDFSKSVPLNNYD 70

Query: 70  DLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
            L+P+++R++ G+   +L        ++SSGTT  + KF+P   E +E
Sbjct: 71  TLKPWVERLMQGE-QNMLWSHDTKWFAKSSGTTSDRSKFIPVTKESLE 117


>gi|29348764|ref|NP_812267.1| auxin-regulated protein [Bacteroides thetaiotaomicron VPI-5482]
 gi|383124937|ref|ZP_09945597.1| hypothetical protein BSIG_1318 [Bacteroides sp. 1_1_6]
 gi|29340670|gb|AAO78461.1| putative auxin-regulated protein [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|251840912|gb|EES68993.1| hypothetical protein BSIG_1318 [Bacteroides sp. 1_1_6]
          Length = 503

 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 57/107 (53%), Gaps = 1/107 (0%)

Query: 11  DELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHED 70
           D  +++ +     A  IQ   L +++ + A  E+ +          E F++ +P+ T+E+
Sbjct: 12  DSRLKQIDLYASQASEIQHRVLSRLVNQAAQTEWGKKYDYASIRSYEDFRNRLPIQTYEE 71

Query: 71  LQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
           ++PY++R+  G+   +L    I   ++SSGTT  K KFLP + E +E
Sbjct: 72  IKPYVERLRAGE-QNLLWPSEIRWFAKSSGTTNDKSKFLPVSKEALE 117


>gi|298387129|ref|ZP_06996683.1| GH3 auxin-responsive promoter family protein [Bacteroides sp.
           1_1_14]
 gi|298260279|gb|EFI03149.1| GH3 auxin-responsive promoter family protein [Bacteroides sp.
           1_1_14]
          Length = 415

 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 57/107 (53%), Gaps = 1/107 (0%)

Query: 11  DELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHED 70
           D  +++ +     A  IQ   L +++ + A  E+ +          E F++ +P+ T+E+
Sbjct: 12  DSRLKQIDLYASQASEIQHRVLSRLVNQAAQTEWGKKYDYASIRSYEDFRNRLPIQTYEE 71

Query: 71  LQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
           ++PY++R+  G+   +L    I   ++SSGTT  K KFLP + E +E
Sbjct: 72  IKPYVERLRAGE-QNLLWPSEIRWFAKSSGTTNDKSKFLPVSKEALE 117


>gi|325103359|ref|YP_004273013.1| GH3 auxin-responsive promoter [Pedobacter saltans DSM 12145]
 gi|324972207|gb|ADY51191.1| GH3 auxin-responsive promoter [Pedobacter saltans DSM 12145]
          Length = 499

 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 44/168 (26%), Positives = 81/168 (48%), Gaps = 9/168 (5%)

Query: 23  DAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGD 82
           +A   QR+ L  ++++     + ++         + FK  VP+  +EDL+PYI R++ G+
Sbjct: 25  NAVESQRQILTHLIKQAQHTVFGRDHHFESIKSYQDFKKNVPIADYEDLKPYIDRVVKGE 84

Query: 83  ISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTS---YAFRNREFPIGKG 139
            + +  GKP+   +++SGTT G  K++P + E M   ++  R +   Y     +     G
Sbjct: 85  ENILWKGKPM-YFAKTSGTTSG-VKYIPISKESMPEHIKAARNALLTYIQETGKADFVDG 142

Query: 140 KALQFIYGSKQSKTKGGLNAGTATTNVYR---SSTFKAEMKAMQSQCC 184
           K + F+ GS +   KGG+  G  +  V     +   K  + A Q+ C 
Sbjct: 143 KMI-FLQGSPEMDKKGGIYFGRLSGIVAHHVPAYLQKNRLPAYQTNCI 189


>gi|329954115|ref|ZP_08295210.1| GH3 auxin-responsive promoter [Bacteroides clarus YIT 12056]
 gi|328528092|gb|EGF55072.1| GH3 auxin-responsive promoter [Bacteroides clarus YIT 12056]
          Length = 505

 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 57/106 (53%), Gaps = 1/106 (0%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           ++E E  T  A  +Q   LR+++   A+ E+ +          E FK  +P+ T+E+++P
Sbjct: 16  LKEIELYTDHASELQAGVLRRLVRMAANTEWGKKYDYASIRTYEDFKKRLPIQTYEEIKP 75

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETT 119
           Y+ R+  G+   +L    I   ++SSGTT  K KFLP + E ++ T
Sbjct: 76  YVARLRAGE-QNLLWPSEIRWFAKSSGTTNDKSKFLPVSKESLQDT 120


>gi|445113037|ref|ZP_21377363.1| hypothetical protein HMPREF0662_00403 [Prevotella nigrescens F0103]
 gi|444841220|gb|ELX68237.1| hypothetical protein HMPREF0662_00403 [Prevotella nigrescens F0103]
          Length = 505

 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 89/392 (22%), Positives = 162/392 (41%), Gaps = 80/392 (20%)

Query: 16  EFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYI 75
           E E    + E +Q E L+ +++     EY +    +   +  +F   +PL T+E+L+ YI
Sbjct: 18  ELERYINEGEEMQHEILQYLVKRGKDTEYGRKYLFSTINNYNNFAQNIPLNTYEELKGYI 77

Query: 76  QRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP 135
            R+  G+ + +  G+ +   ++SSGTT  K KF+P   E               +N  + 
Sbjct: 78  DRMRHGERNILWPGQ-VKWYAKSSGTTNDKSKFIPITHE-------------GLQNVHYQ 123

Query: 136 IGKGKALQFIYGSKQSKT---KGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFG 192
            GK     ++  +  SK    KG +  G+ + N    ++   ++ A+  +  +P      
Sbjct: 124 GGKDVLAYYLSNNPDSKLFSGKGLILGGSHSPNYNLPNSLVGDLSAILIENINP------ 177

Query: 193 PDFHQSLYCHLLCGLIF--REEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSR 250
                      L  L+    +E+ L+ S F               E   D I   VLS  
Sbjct: 178 -----------LANLVRVPSKEVALL-SDF---------------EVKRDKIAREVLSQN 210

Query: 251 IT-VPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAK--YLSGI-MTGSM 306
           +T +  + + M  +L    EL+   H            + E++PN +  +  GI  T   
Sbjct: 211 VTNISGVPSWMLSVLVRVMELSGKKH------------LQEVWPNLEVFFHGGIAFTPYR 258

Query: 307 EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLG 366
           E Y + +     D+  M   Y +SEG+ G   +P+   + +   +L    Y+EF+P  + 
Sbjct: 259 EQYEQLIT--KQDMHYMET-YNASEGFFGIQDDPN---DKSMLLMLDYGVYYEFLP--MD 310

Query: 367 NLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV 398
             E++    +P  V L  V+VG  Y +I++ V
Sbjct: 311 EFENE----KPNIVPLEGVEVGRNYAMIISTV 338


>gi|404358249|gb|AFR64117.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. lyrata]
          Length = 184

 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 44/73 (60%), Gaps = 7/73 (9%)

Query: 327 YGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVK 386
           Y SSE + G N+ P   P   ++ ++PN+ YFEF+P  +   +S++       V L +V+
Sbjct: 6   YASSESYFGINLKPMCKPSEVSYTIMPNMAYFEFLPHEVPTGKSEL-------VDLADVE 58

Query: 387 VGEEYEIIVTNVA 399
           VG+EYE+++T  A
Sbjct: 59  VGKEYELVITTYA 71


>gi|404487128|ref|ZP_11022315.1| hypothetical protein HMPREF9448_02776 [Barnesiella intestinihominis
           YIT 11860]
 gi|404335624|gb|EJZ62093.1| hypothetical protein HMPREF9448_02776 [Barnesiella intestinihominis
           YIT 11860]
          Length = 498

 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 52/88 (59%), Gaps = 1/88 (1%)

Query: 27  IQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPI 86
           IQ++TL  +L++  + E+      N  +  +SF   +P+  +E+L+PYI+R + G+   I
Sbjct: 28  IQQKTLLDLLQKAKNTEFGTKFKFNDISSYKSFAENIPINGYEELKPYIERTMSGE-QNI 86

Query: 87  LTGKPITTISRSSGTTQGKPKFLPFNDE 114
           L   PI   ++SSGTT  K KF+P + E
Sbjct: 87  LWPTPIRHFAKSSGTTNDKSKFIPVSAE 114


>gi|429746760|ref|ZP_19280090.1| GH3 auxin-responsive promoter [Capnocytophaga sp. oral taxon 380
           str. F0488]
 gi|429165275|gb|EKY07338.1| GH3 auxin-responsive promoter [Capnocytophaga sp. oral taxon 380
           str. F0488]
          Length = 502

 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 83/178 (46%), Gaps = 10/178 (5%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           I++ +   +   ++Q   L ++L+     E  +        + E F    PLV++E  +P
Sbjct: 18  IDQIQEFVEHPHKVQERVLLELLDAAKDTELGKLYNFAEVKNYEQFSRNTPLVSYEAFEP 77

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTS------Y 127
           Y++R   G+ + +    PI   ++SSGTT  K KF+P ++E ++  L  +++       Y
Sbjct: 78  YVERARRGERN-VFWHTPIKWFAKSSGTTNAKSKFIPVSEEALQ--LCHYKSGKDMLCLY 134

Query: 128 AFRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCS 185
              N +  + KGK+L+ + GSKQ   + G   G  +  +  +  F AE     S   S
Sbjct: 135 LNNNEDSNLFKGKSLR-LGGSKQLYEQNGTYFGDLSAILIENLPFWAEWSCTPSNKVS 191


>gi|256819591|ref|YP_003140870.1| GH3 auxin-responsive promoter [Capnocytophaga ochracea DSM 7271]
 gi|256581174|gb|ACU92309.1| GH3 auxin-responsive promoter [Capnocytophaga ochracea DSM 7271]
          Length = 502

 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 83/178 (46%), Gaps = 10/178 (5%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           I++ +   +   ++Q   L ++L+     E  +        + E F    PLV++E  +P
Sbjct: 18  IDQIQEFVEHPHKVQERVLLELLDAAKDTELGKLYNFAEVKNYEQFSRNTPLVSYEAFEP 77

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTS------Y 127
           Y++R   G+ + +    PI   ++SSGTT  K KF+P ++E ++  L  +++       Y
Sbjct: 78  YVERARRGERN-VFWHTPIKWFAKSSGTTNAKSKFIPVSEEALQ--LCHYKSGKDMLCLY 134

Query: 128 AFRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCS 185
              N +  + KGK+L+ + GSKQ   + G   G  +  +  +  F AE     S   S
Sbjct: 135 LNNNEDSNLFKGKSLR-LGGSKQLYEQNGTYFGDLSAILIENLPFWAEWSCTPSNKVS 191


>gi|420148972|ref|ZP_14656157.1| GH3 auxin-responsive promoter [Capnocytophaga sp. oral taxon 335
           str. F0486]
 gi|394754461|gb|EJF37851.1| GH3 auxin-responsive promoter [Capnocytophaga sp. oral taxon 335
           str. F0486]
          Length = 502

 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 83/178 (46%), Gaps = 10/178 (5%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           I++ +   +   ++Q   L ++L+     E  +        + E F    PLV++E  +P
Sbjct: 18  IDQIQEFVEHPHKVQERVLLELLDAAKDTELGKLYNFAEVKNYEQFSRNTPLVSYEAFEP 77

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTS------Y 127
           Y++R   G+ + +    PI   ++SSGTT  K KF+P ++E ++  L  +++       Y
Sbjct: 78  YVERARRGERN-VFWHTPIKWFAKSSGTTNAKSKFIPVSEEALQ--LCHYKSGKDMLCLY 134

Query: 128 AFRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCS 185
              N +  + KGK+L+ + GSKQ   + G   G  +  +  +  F AE     S   S
Sbjct: 135 LNNNEDSNLFKGKSLR-LGGSKQLYEQNGTYFGDLSAILIENLPFWAEWSCTPSNKVS 191


>gi|443705236|gb|ELU01891.1| hypothetical protein CAPTEDRAFT_100183 [Capitella teleta]
          Length = 382

 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 89/190 (46%), Gaps = 12/190 (6%)

Query: 211 EEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVP-SIRAAMSKILKPNPE 269
           +++Q +   FA      FR  E   E LCDD+  G LS  + V   IRA +++ L+    
Sbjct: 24  KDLQFINGFFAPVCYTFFRMIEDQGEALCDDLENGSLSEDLKVDEEIRAEVNRNLRVEAH 83

Query: 270 LADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLR-HYAGDLPLMSADYG 328
             + + ++    ++  GL   L+PN K +   +TG+ E   + L+  Y   + +  + + 
Sbjct: 84  RVNQVRRELQKGTD--GLALRLWPNLKMIYIAITGAFEPMYRMLKSSYIKGVYVKGSMHA 141

Query: 329 SSEGWIG--ANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVK 386
           S+E  +G        L  +   F    +  +FEFIP      E  +    P+ + L +++
Sbjct: 142 STEAVVGFPQESLGDLGEKPRGFVFAHSSAFFEFIP------EDGMDSASPRTIFLDQLQ 195

Query: 387 VGEEYEIIVT 396
           VG+ YE+++T
Sbjct: 196 VGKTYEVLIT 205


>gi|429755457|ref|ZP_19288111.1| GH3 auxin-responsive promoter [Capnocytophaga sp. oral taxon 324
           str. F0483]
 gi|429174303|gb|EKY15784.1| GH3 auxin-responsive promoter [Capnocytophaga sp. oral taxon 324
           str. F0483]
          Length = 502

 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 83/178 (46%), Gaps = 10/178 (5%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           I++ +   +   ++Q   L ++L+     E  +        + E F    PLV++E  +P
Sbjct: 18  IDQIQEFVEHPHKVQERVLLELLDAAKDTELGKLYNFAEVKNYEQFSRNTPLVSYEAFEP 77

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTS------Y 127
           Y++R   G+ + +    PI   ++SSGTT  K KF+P ++E ++  L  +++       Y
Sbjct: 78  YVERARRGERN-VFWHTPIKWFAKSSGTTNAKSKFIPVSEEALQ--LCHYKSGKDMLCLY 134

Query: 128 AFRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCS 185
              N +  + KGK+L+ + GSKQ   + G   G  +  +  +  F AE     S   S
Sbjct: 135 LNNNEDSNLFKGKSLR-LGGSKQLYEQNGTYFGDLSAILIENLPFWAEWSCTPSNKVS 191


>gi|393780581|ref|ZP_10368793.1| GH3 auxin-responsive promoter [Capnocytophaga sp. oral taxon 412
           str. F0487]
 gi|392608309|gb|EIW91164.1| GH3 auxin-responsive promoter [Capnocytophaga sp. oral taxon 412
           str. F0487]
          Length = 502

 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 83/178 (46%), Gaps = 10/178 (5%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           I++ +   +   ++Q   L ++L+     E  +        + E F    PLV++E  +P
Sbjct: 18  IDQIQEFVEHPHKVQERVLLELLDAAKDTELGKLYNFAEVKNYEQFSRNTPLVSYEAFEP 77

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTS------Y 127
           Y++R   G+ + +    PI   ++SSGTT  K KF+P ++E ++  L  +++       Y
Sbjct: 78  YVERARRGERN-VFWHTPIKWFAKSSGTTNAKSKFIPVSEEALQ--LCHYKSGKDMLCLY 134

Query: 128 AFRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCS 185
              N +  + KGK+L+ + GSKQ   + G   G  +  +  +  F AE     S   S
Sbjct: 135 LNNNEDSNLFKGKSLR-LGGSKQLYEQNGTYFGDLSAILIENLPFWAEWSCTPSNKVS 191


>gi|380693187|ref|ZP_09858046.1| auxin-regulated protein [Bacteroides faecis MAJ27]
          Length = 503

 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 56/107 (52%), Gaps = 1/107 (0%)

Query: 11  DELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHED 70
           D  +++ +     A  IQ   L +++ + A  E+ +          E F+  +P+ T+E+
Sbjct: 12  DSRLKQIDLYASQASEIQHRVLSRLVNQAAQTEWGKKYDYASIRSYEDFRKRLPIQTYEE 71

Query: 71  LQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
           ++PY++R+  G+   +L    I   ++SSGTT  K KFLP + E +E
Sbjct: 72  IKPYVERLRAGE-QNLLWPSEIRWFAKSSGTTNDKSKFLPVSKEALE 117


>gi|270294931|ref|ZP_06201132.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|423304256|ref|ZP_17282255.1| hypothetical protein HMPREF1072_01195 [Bacteroides uniformis
           CL03T00C23]
 gi|423310630|ref|ZP_17288614.1| hypothetical protein HMPREF1073_03364 [Bacteroides uniformis
           CL03T12C37]
 gi|270274178|gb|EFA20039.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|392681801|gb|EIY75158.1| hypothetical protein HMPREF1073_03364 [Bacteroides uniformis
           CL03T12C37]
 gi|392684842|gb|EIY78162.1| hypothetical protein HMPREF1072_01195 [Bacteroides uniformis
           CL03T00C23]
          Length = 503

 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 84/392 (21%), Positives = 162/392 (41%), Gaps = 74/392 (18%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           ++E E  T  A  +Q+  L++++   A+ E+ +          E FK  +P+ T+E+++P
Sbjct: 16  LKEIEQYTSHAGELQQLVLQRLVRTAANTEWGKKHDYASIRTYEDFKKRLPIQTYEEVKP 75

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDE-LMETTLQIFRTSYAFRNR 132
           Y+ R+  G+ + +L    I   ++SSGTT  K KFLP + E L +T  +  R + A    
Sbjct: 76  YVTRLRAGEQN-LLWPSEIRWFAKSSGTTNDKSKFLPVSRESLHDTHYKGGRDAVAIY-- 132

Query: 133 EFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSP-DEVIF 191
              +G+    +F  G      KG +  G+   N+  + +   ++ A+  +  +P    + 
Sbjct: 133 ---LGQNPESRFFSG------KGLILGGSHAPNLNTNHSLVGDLSAILIENINPLVNFVR 183

Query: 192 GPDFHQSLYCHLLCGL--IFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSS 249
            P    +L  H    +  I RE I    S  +        ++ L            VL  
Sbjct: 184 VPSKQTALMEHFEPKMEAIARETIHANVSNLS-----GVPSWML------------VLIK 226

Query: 250 RITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHY 309
            I   + + ++ +I    P L    H   +             P  +    ++  S  HY
Sbjct: 227 HILEKTGKQSLEEIW---PNLEVFFHGGVA-----------FTPYREQYKDVIRSSKMHY 272

Query: 310 LKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIG-YFEFIP-QRLGN 367
           ++               Y +SEG+ G   +P+ P  L    ++ + G ++EFIP + +G 
Sbjct: 273 VET--------------YNASEGYFGTQNDPADPAML----LMIDYGIFYEFIPLEDVGK 314

Query: 368 LESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
              +  C+E       EV++ + Y ++++  A
Sbjct: 315 ENPRTFCLE-------EVELNKNYAMVISTSA 339


>gi|392391021|ref|YP_006427624.1| GH3 auxin-responsive promoter-binding protein [Ornithobacterium
           rhinotracheale DSM 15997]
 gi|390522099|gb|AFL97830.1| GH3 auxin-responsive promoter-binding protein [Ornithobacterium
           rhinotracheale DSM 15997]
          Length = 505

 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 71/161 (44%), Gaps = 13/161 (8%)

Query: 1   MLEKMETVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFK 60
           ++ K+ +  V+  + + E I       Q+   + ++E     +Y Q          E FK
Sbjct: 4   IVNKIASFVVNSYVNKVEEIRTQPIEAQQRVFKYLIERGKRTQYGQKFDFKNIKTYEDFK 63

Query: 61  SCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME--- 117
             VP+V +E+L+P I+R   G    +  GK +   ++SSGTT  K KF+P   E +E   
Sbjct: 64  EKVPVVIYEELEPEIERARRGAADVLWPGK-VQWFAKSSGTTNAKSKFIPITKESLEQNH 122

Query: 118 -TTLQIFRTSY--------AFRNREFPIGKGKALQFIYGSK 149
            T+ ++   +Y         F  +   IG    L   YG+K
Sbjct: 123 FTSGKMLFANYLENHPNTAMFTKKNLRIGGSADLYQEYGTK 163


>gi|392398363|ref|YP_006434964.1| GH3 auxin-responsive promoter-binding protein [Flexibacter
           litoralis DSM 6794]
 gi|390529441|gb|AFM05171.1| GH3 auxin-responsive promoter-binding protein [Flexibacter
           litoralis DSM 6794]
          Length = 510

 Score = 57.8 bits (138), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 28/104 (26%), Positives = 57/104 (54%), Gaps = 1/104 (0%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           +E  E   K+  ++Q E  + ++    + E+ +        + + F+  VP+ ++E+  P
Sbjct: 17  LENIENFKKNPFQVQEEVFKYLIASGKNTEWGKKHDYFSIRNQKHFEQNVPISSYEEFYP 76

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
           YI+R + G+   +L  KPI   S+SSGTT  + K++P ++E ++
Sbjct: 77  YIERSLKGE-QNLLWNKPIIGFSKSSGTTNARSKYIPVSEEGLD 119


>gi|160888580|ref|ZP_02069583.1| hypothetical protein BACUNI_00997 [Bacteroides uniformis ATCC 8492]
 gi|317477926|ref|ZP_07937110.1| hypothetical protein HMPREF1007_00226 [Bacteroides sp. 4_1_36]
 gi|156861894|gb|EDO55325.1| GH3 auxin-responsive promoter [Bacteroides uniformis ATCC 8492]
 gi|316905942|gb|EFV27712.1| hypothetical protein HMPREF1007_00226 [Bacteroides sp. 4_1_36]
          Length = 503

 Score = 57.8 bits (138), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 84/392 (21%), Positives = 162/392 (41%), Gaps = 74/392 (18%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           ++E E  T  A  +Q+  L++++   A+ E+ +          E FK  +P+ T+E+++P
Sbjct: 16  LKEIEQYTSHAGELQQLVLQRLVRTAANTEWGKKHDYASIRTYEDFKKRLPIQTYEEVKP 75

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDE-LMETTLQIFRTSYAFRNR 132
           Y+ R+  G+ + +L    I   ++SSGTT  K KFLP + E L +T  +  R + A    
Sbjct: 76  YVTRLRAGEQN-LLWPSEIRWFAKSSGTTNDKSKFLPVSRESLHDTHYKGGRDAVAIY-- 132

Query: 133 EFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSP-DEVIF 191
              +G+    +F  G      KG +  G+   N+  + +   ++ A+  +  +P    + 
Sbjct: 133 ---LGQNPESRFFSG------KGLILGGSHAPNLNTNHSLVGDLSAILIENINPLVNFVR 183

Query: 192 GPDFHQSLYCHLLCGL--IFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSS 249
            P    +L  H    +  I RE I    S  +        ++ L            VL  
Sbjct: 184 VPSKQTALMEHFEPKMEAIARETIHANVSNLS-----GVPSWML------------VLIK 226

Query: 250 RITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHY 309
            I   + + ++ +I    P L    H   +             P  +    ++  S  HY
Sbjct: 227 HILEKTGKQSLEEIW---PNLEVFFHGGVA-----------FTPYREQYKDVIRSSKMHY 272

Query: 310 LKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIG-YFEFIP-QRLGN 367
           ++               Y +SEG+ G   +P+ P  L    ++ + G ++EFIP + +G 
Sbjct: 273 VET--------------YNASEGYFGTQNDPADPAML----LMIDYGIFYEFIPLEDVGK 314

Query: 368 LESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
              +  C+E       EV++ + Y ++++  A
Sbjct: 315 ENPRTFCLE-------EVELNKNYAMVISTSA 339


>gi|404358667|gb|AFR64326.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358669|gb|AFR64327.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358677|gb|AFR64331.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358681|gb|AFR64333.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358683|gb|AFR64334.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358685|gb|AFR64335.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358687|gb|AFR64336.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358691|gb|AFR64338.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358693|gb|AFR64339.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
          Length = 184

 Score = 57.8 bits (138), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 44/73 (60%), Gaps = 7/73 (9%)

Query: 327 YGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVK 386
           Y SSE + G N+ P   P   ++ ++PN+ YFEF+P  +   +S++       V L +V+
Sbjct: 6   YASSESYFGINLKPMCKPSEVSYTIMPNMAYFEFLPHEVPTGKSEL-------VELADVE 58

Query: 387 VGEEYEIIVTNVA 399
           VG+EYE+++T  A
Sbjct: 59  VGKEYELVITTYA 71


>gi|53711507|ref|YP_097499.1| auxin-regulated protein [Bacteroides fragilis YCH46]
 gi|60679770|ref|YP_209914.1| plant auxin-regulated protein [Bacteroides fragilis NCTC 9343]
 gi|265764900|ref|ZP_06093175.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|336407704|ref|ZP_08588200.1| hypothetical protein HMPREF1018_00215 [Bacteroides sp. 2_1_56FAA]
 gi|375356555|ref|YP_005109326.1| putative plant auxin-regulated protein [Bacteroides fragilis 638R]
 gi|383116519|ref|ZP_09937267.1| hypothetical protein BSHG_1411 [Bacteroides sp. 3_2_5]
 gi|423248177|ref|ZP_17229193.1| hypothetical protein HMPREF1066_00203 [Bacteroides fragilis
           CL03T00C08]
 gi|423253126|ref|ZP_17234057.1| hypothetical protein HMPREF1067_00701 [Bacteroides fragilis
           CL03T12C07]
 gi|423259431|ref|ZP_17240354.1| hypothetical protein HMPREF1055_02631 [Bacteroides fragilis
           CL07T00C01]
 gi|423263595|ref|ZP_17242598.1| hypothetical protein HMPREF1056_00285 [Bacteroides fragilis
           CL07T12C05]
 gi|423269924|ref|ZP_17248896.1| hypothetical protein HMPREF1079_01978 [Bacteroides fragilis
           CL05T00C42]
 gi|423272621|ref|ZP_17251568.1| hypothetical protein HMPREF1080_00221 [Bacteroides fragilis
           CL05T12C13]
 gi|423282516|ref|ZP_17261401.1| hypothetical protein HMPREF1204_00939 [Bacteroides fragilis HMW
           615]
 gi|52214372|dbj|BAD46965.1| putative auxin-regulated protein [Bacteroides fragilis YCH46]
 gi|60491204|emb|CAH05952.1| putative plant auxin-regulated protein [Bacteroides fragilis NCTC
           9343]
 gi|251948210|gb|EES88492.1| hypothetical protein BSHG_1411 [Bacteroides sp. 3_2_5]
 gi|263254284|gb|EEZ25718.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|301161235|emb|CBW20773.1| putative plant auxin-regulated protein [Bacteroides fragilis 638R]
 gi|335944783|gb|EGN06600.1| hypothetical protein HMPREF1018_00215 [Bacteroides sp. 2_1_56FAA]
 gi|387777011|gb|EIK39111.1| hypothetical protein HMPREF1055_02631 [Bacteroides fragilis
           CL07T00C01]
 gi|392657026|gb|EIY50663.1| hypothetical protein HMPREF1067_00701 [Bacteroides fragilis
           CL03T12C07]
 gi|392660284|gb|EIY53898.1| hypothetical protein HMPREF1066_00203 [Bacteroides fragilis
           CL03T00C08]
 gi|392700770|gb|EIY93932.1| hypothetical protein HMPREF1079_01978 [Bacteroides fragilis
           CL05T00C42]
 gi|392707017|gb|EIZ00137.1| hypothetical protein HMPREF1056_00285 [Bacteroides fragilis
           CL07T12C05]
 gi|392708698|gb|EIZ01803.1| hypothetical protein HMPREF1080_00221 [Bacteroides fragilis
           CL05T12C13]
 gi|404582084|gb|EKA86779.1| hypothetical protein HMPREF1204_00939 [Bacteroides fragilis HMW
           615]
          Length = 503

 Score = 57.8 bits (138), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 42/179 (23%), Positives = 84/179 (46%), Gaps = 17/179 (9%)

Query: 11  DELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHED 70
           D  ++  +     A  IQ   L +++++  + E+ +        + E FK+ +P+ T+E+
Sbjct: 12  DSRLKAIDLYDTQAGEIQHRVLTRLVKQAENTEWGKKYDYKSIRNYEDFKNRLPIQTYEE 71

Query: 71  LQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFR 130
           ++PY++R+  G+   +L    I   ++SSGTT  K KFLP + E +E             
Sbjct: 72  VKPYVERLRAGE-QNLLWPSEIRWFAKSSGTTNDKSKFLPVSKEALEDI----------- 119

Query: 131 NREFPIGKGKALQFIYGSKQSK---TKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSP 186
              +  GK  A  +   + +S+    KG +  G+ + N+  + +   ++ A+  Q  SP
Sbjct: 120 --HYRGGKDAAAIYFRMNPESRFFSGKGLILGGSHSPNLNSNHSLVGDLSAILIQNVSP 176


>gi|404358295|gb|AFR64140.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358297|gb|AFR64141.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358299|gb|AFR64142.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358301|gb|AFR64143.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358303|gb|AFR64144.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358305|gb|AFR64145.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358307|gb|AFR64146.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358309|gb|AFR64147.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358311|gb|AFR64148.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358313|gb|AFR64149.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358315|gb|AFR64150.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358317|gb|AFR64151.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358319|gb|AFR64152.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358321|gb|AFR64153.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358323|gb|AFR64154.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358325|gb|AFR64155.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358327|gb|AFR64156.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358329|gb|AFR64157.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358331|gb|AFR64158.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358333|gb|AFR64159.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358335|gb|AFR64160.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358337|gb|AFR64161.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358339|gb|AFR64162.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358341|gb|AFR64163.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358343|gb|AFR64164.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358345|gb|AFR64165.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358347|gb|AFR64166.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358349|gb|AFR64167.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358351|gb|AFR64168.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358353|gb|AFR64169.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358355|gb|AFR64170.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358357|gb|AFR64171.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
          Length = 184

 Score = 57.8 bits (138), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 44/73 (60%), Gaps = 7/73 (9%)

Query: 327 YGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVK 386
           Y SSE + G N+ P   P   ++ ++PN+ YFEF+P  +   +S++       V L +V+
Sbjct: 6   YASSESYFGINLKPMCKPSEVSYTIMPNMAYFEFLPHEVPTGKSEL-------VELADVE 58

Query: 387 VGEEYEIIVTNVA 399
           VG+EYE+++T  A
Sbjct: 59  VGKEYELVITTYA 71


>gi|392398737|ref|YP_006435338.1| GH3 auxin-responsive promoter-binding protein [Flexibacter
           litoralis DSM 6794]
 gi|390529815|gb|AFM05545.1| GH3 auxin-responsive promoter-binding protein [Flexibacter
           litoralis DSM 6794]
          Length = 498

 Score = 57.8 bits (138), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 86/179 (48%), Gaps = 6/179 (3%)

Query: 13  LIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQ 72
           ++ + +   +++E+IQ + L+K++ E     + ++       + E FK  VP+  +EDL+
Sbjct: 14  IVSQQKKWIQNSEKIQYQWLQKLVFEAKDTAFGKDHNFGDIKNYEDFKKNVPINDYEDLR 73

Query: 73  PYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNR 132
           PYI RI+ G+ + +  G+P+   +++SGTT G  K++P   + +   +   R +      
Sbjct: 74  PYIDRILRGEQNILWKGQPL-YFAKTSGTTSGT-KYIPITKDSISNHINSARDALLCYIN 131

Query: 133 EFPIGK--GKALQFIYGSKQSKTKGGLNAG--TATTNVYRSSTFKAEMKAMQSQCCSPD 187
           E    +   K+L F+ GS   + K G+  G  +   N +  S  +   K      C  D
Sbjct: 132 ETGNSQFLDKSLIFLSGSPVLEKKAGVPLGRLSGIVNHHVPSYLRTNQKPTYETNCIED 190


>gi|404358549|gb|AFR64267.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358577|gb|AFR64281.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358581|gb|AFR64283.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
          Length = 184

 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 44/73 (60%), Gaps = 7/73 (9%)

Query: 327 YGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVK 386
           Y SSE + G N+ P   P   ++ ++PN+ YFEF+P  +   +S++       V L +V+
Sbjct: 6   YASSESYFGINLKPMCKPSEVSYTIMPNMAYFEFLPHEVPTGKSEL-------VELADVE 58

Query: 387 VGEEYEIIVTNVA 399
           VG+EYE+++T  A
Sbjct: 59  VGKEYELVITTYA 71


>gi|404358119|gb|AFR64052.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358121|gb|AFR64053.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358123|gb|AFR64054.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358125|gb|AFR64055.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358127|gb|AFR64056.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358129|gb|AFR64057.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358131|gb|AFR64058.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358133|gb|AFR64059.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358135|gb|AFR64060.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358139|gb|AFR64062.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358141|gb|AFR64063.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358143|gb|AFR64064.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358145|gb|AFR64065.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358147|gb|AFR64066.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358149|gb|AFR64067.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358151|gb|AFR64068.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358153|gb|AFR64069.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358155|gb|AFR64070.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358157|gb|AFR64071.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358159|gb|AFR64072.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358161|gb|AFR64073.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358163|gb|AFR64074.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358165|gb|AFR64075.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358167|gb|AFR64076.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358169|gb|AFR64077.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358171|gb|AFR64078.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358175|gb|AFR64080.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358177|gb|AFR64081.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358509|gb|AFR64247.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358567|gb|AFR64276.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358575|gb|AFR64280.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
          Length = 184

 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 44/73 (60%), Gaps = 7/73 (9%)

Query: 327 YGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVK 386
           Y SSE + G N+ P   P   ++ ++PN+ YFEF+P  +   +S++       V L +V+
Sbjct: 6   YASSESYFGINLKPMCKPSEVSYTIMPNMAYFEFLPHEVPTGKSEL-------VELADVE 58

Query: 387 VGEEYEIIVTNVA 399
           VG+EYE+++T  A
Sbjct: 59  VGKEYELVITTYA 71


>gi|404358505|gb|AFR64245.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
          Length = 184

 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 44/73 (60%), Gaps = 7/73 (9%)

Query: 327 YGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVK 386
           Y SSE + G N+ P   P   ++ ++PN+ YFEF+P  +   +S++       V L +V+
Sbjct: 6   YASSESYFGINLKPMCKPSEVSYTIMPNMAYFEFLPHEVPTGKSEL-------VELADVE 58

Query: 387 VGEEYEIIVTNVA 399
           VG+EYE+++T  A
Sbjct: 59  VGKEYELVITTYA 71


>gi|404358221|gb|AFR64103.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358229|gb|AFR64107.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358513|gb|AFR64249.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358533|gb|AFR64259.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358537|gb|AFR64261.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358565|gb|AFR64275.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
          Length = 184

 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 44/73 (60%), Gaps = 7/73 (9%)

Query: 327 YGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVK 386
           Y SSE + G N+ P   P   ++ ++PN+ YFEF+P  +   +S++       V L +V+
Sbjct: 6   YASSESYFGINLKPMCKPSEVSYTIMPNMAYFEFLPHEVPTGKSEL-------VELADVE 58

Query: 387 VGEEYEIIVTNVA 399
           VG+EYE+++T  A
Sbjct: 59  VGKEYELVITTYA 71


>gi|404358213|gb|AFR64099.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358385|gb|AFR64185.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358389|gb|AFR64187.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358401|gb|AFR64193.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358641|gb|AFR64313.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
          Length = 184

 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 44/73 (60%), Gaps = 7/73 (9%)

Query: 327 YGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVK 386
           Y SSE + G N+ P   P   ++ ++PN+ YFEF+P  +   +S++       V L +V+
Sbjct: 6   YASSESYFGINLKPMCKPSEVSYTIMPNMAYFEFLPHEVPTGKSEL-------VELADVE 58

Query: 387 VGEEYEIIVTNVA 399
           VG+EYE+++T  A
Sbjct: 59  VGKEYELVITTYA 71


>gi|404358523|gb|AFR64254.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358539|gb|AFR64262.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358541|gb|AFR64263.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358559|gb|AFR64272.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
          Length = 184

 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 44/73 (60%), Gaps = 7/73 (9%)

Query: 327 YGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVK 386
           Y SSE + G N+ P   P   ++ ++PN+ YFEF+P  +   +S++       V L +V+
Sbjct: 6   YASSESYFGINLKPMCKPSEVSYTIMPNMAYFEFLPHEVPTGKSEL-------VELADVE 58

Query: 387 VGEEYEIIVTNVA 399
           VG+EYE+++T  A
Sbjct: 59  VGKEYELVITTYA 71


>gi|404358265|gb|AFR64125.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. lyrata]
 gi|404358277|gb|AFR64131.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. lyrata]
 gi|404358289|gb|AFR64137.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. lyrata]
          Length = 184

 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 44/73 (60%), Gaps = 7/73 (9%)

Query: 327 YGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVK 386
           Y SSE + G N+ P   P   ++ ++PN+ YFEF+P  +   +S++       V L +V+
Sbjct: 6   YASSESYFGINLKPMCKPSEVSYTIMPNMAYFEFLPHEVPTGKSEL-------VELADVE 58

Query: 387 VGEEYEIIVTNVA 399
           VG+EYE+++T  A
Sbjct: 59  VGKEYELVITTYA 71


>gi|404358557|gb|AFR64271.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
          Length = 184

 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 44/73 (60%), Gaps = 7/73 (9%)

Query: 327 YGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVK 386
           Y SSE + G N+ P   P   ++ ++PN+ YFEF+P  +   +S++       V L +V+
Sbjct: 6   YASSESYFGINLKPMCKPSEVSYTIMPNMAYFEFLPHEVPTGKSEL-------VELADVE 58

Query: 387 VGEEYEIIVTNVA 399
           VG+EYE+++T  A
Sbjct: 59  VGKEYELVITTYA 71


>gi|149275861|ref|ZP_01882006.1| auxin-regulated protein [Pedobacter sp. BAL39]
 gi|149233289|gb|EDM38663.1| auxin-regulated protein [Pedobacter sp. BAL39]
          Length = 499

 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 73/153 (47%), Gaps = 10/153 (6%)

Query: 13  LIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQ 72
           ++       KDA   Q + + ++ +      + ++         E FK  VP+  +EDL+
Sbjct: 15  VVRRINKWKKDAVGAQEKIMGRLTDTARHTAFGKDHNFGSILTYEDFKKEVPIRDYEDLR 74

Query: 73  PYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTS-----Y 127
           PYI R+++G+   +  GKP    +++SGTT G  K++P + E M   ++  R +     +
Sbjct: 75  PYIDRVVNGEPDVMWKGKP-QYFAKTSGTTSG-VKYIPISKESMPEHIKAARNALLTYIH 132

Query: 128 AFRNREFPIGKGKALQFIYGSKQSKTKGGLNAG 160
              N +F  GK   + F+ GS     K G+N G
Sbjct: 133 ETGNVKFVDGK---MIFLQGSPVMSKKNGINVG 162


>gi|404358543|gb|AFR64264.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358561|gb|AFR64273.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358579|gb|AFR64282.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
          Length = 184

 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 44/73 (60%), Gaps = 7/73 (9%)

Query: 327 YGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVK 386
           Y SSE + G N+ P   P   ++ ++PN+ YFEF+P  +   +S++       V L +V+
Sbjct: 6   YASSESYFGINLKPMCKPSEVSYTIMPNMAYFEFLPHEVPTGKSEL-------VELADVE 58

Query: 387 VGEEYEIIVTNVA 399
           VG+EYE+++T  A
Sbjct: 59  VGKEYELVITTYA 71


>gi|404358137|gb|AFR64061.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358173|gb|AFR64079.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358179|gb|AFR64082.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358181|gb|AFR64083.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358183|gb|AFR64084.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358185|gb|AFR64085.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358187|gb|AFR64086.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358189|gb|AFR64087.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358191|gb|AFR64088.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358195|gb|AFR64090.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358197|gb|AFR64091.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358199|gb|AFR64092.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358201|gb|AFR64093.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358203|gb|AFR64094.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358205|gb|AFR64095.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358207|gb|AFR64096.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358209|gb|AFR64097.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358211|gb|AFR64098.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358215|gb|AFR64100.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358217|gb|AFR64101.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358219|gb|AFR64102.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358223|gb|AFR64104.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358225|gb|AFR64105.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358227|gb|AFR64106.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358231|gb|AFR64108.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358233|gb|AFR64109.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358235|gb|AFR64110.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. lyrata]
 gi|404358237|gb|AFR64111.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. lyrata]
 gi|404358239|gb|AFR64112.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. lyrata]
 gi|404358241|gb|AFR64113.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. lyrata]
 gi|404358243|gb|AFR64114.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. lyrata]
 gi|404358245|gb|AFR64115.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. lyrata]
 gi|404358247|gb|AFR64116.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. lyrata]
 gi|404358251|gb|AFR64118.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. lyrata]
 gi|404358253|gb|AFR64119.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. lyrata]
 gi|404358255|gb|AFR64120.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. lyrata]
 gi|404358257|gb|AFR64121.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. lyrata]
 gi|404358259|gb|AFR64122.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. lyrata]
 gi|404358261|gb|AFR64123.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. lyrata]
 gi|404358263|gb|AFR64124.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. lyrata]
 gi|404358267|gb|AFR64126.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. lyrata]
 gi|404358269|gb|AFR64127.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. lyrata]
 gi|404358271|gb|AFR64128.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. lyrata]
 gi|404358273|gb|AFR64129.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. lyrata]
 gi|404358275|gb|AFR64130.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. lyrata]
 gi|404358279|gb|AFR64132.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. lyrata]
 gi|404358281|gb|AFR64133.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. lyrata]
 gi|404358283|gb|AFR64134.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. lyrata]
 gi|404358285|gb|AFR64135.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. lyrata]
 gi|404358287|gb|AFR64136.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. lyrata]
 gi|404358291|gb|AFR64138.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. lyrata]
 gi|404358293|gb|AFR64139.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. lyrata]
 gi|404358359|gb|AFR64172.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358361|gb|AFR64173.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358363|gb|AFR64174.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358365|gb|AFR64175.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358367|gb|AFR64176.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358369|gb|AFR64177.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358371|gb|AFR64178.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358373|gb|AFR64179.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358375|gb|AFR64180.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358377|gb|AFR64181.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358379|gb|AFR64182.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358381|gb|AFR64183.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358383|gb|AFR64184.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358387|gb|AFR64186.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358391|gb|AFR64188.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358393|gb|AFR64189.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358395|gb|AFR64190.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358397|gb|AFR64191.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358399|gb|AFR64192.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358403|gb|AFR64194.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358405|gb|AFR64195.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358407|gb|AFR64196.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358409|gb|AFR64197.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358411|gb|AFR64198.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358413|gb|AFR64199.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358415|gb|AFR64200.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358417|gb|AFR64201.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358419|gb|AFR64202.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358421|gb|AFR64203.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358423|gb|AFR64204.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. lyrata]
 gi|404358425|gb|AFR64205.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. lyrata]
 gi|404358427|gb|AFR64206.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. lyrata]
 gi|404358429|gb|AFR64207.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. lyrata]
 gi|404358431|gb|AFR64208.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. lyrata]
 gi|404358433|gb|AFR64209.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. lyrata]
 gi|404358435|gb|AFR64210.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. lyrata]
 gi|404358437|gb|AFR64211.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. lyrata]
 gi|404358439|gb|AFR64212.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. lyrata]
 gi|404358441|gb|AFR64213.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. lyrata]
 gi|404358443|gb|AFR64214.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. lyrata]
 gi|404358445|gb|AFR64215.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. lyrata]
 gi|404358447|gb|AFR64216.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. lyrata]
 gi|404358449|gb|AFR64217.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. lyrata]
 gi|404358451|gb|AFR64218.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. lyrata]
 gi|404358453|gb|AFR64219.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. lyrata]
 gi|404358455|gb|AFR64220.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. lyrata]
 gi|404358457|gb|AFR64221.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. lyrata]
 gi|404358459|gb|AFR64222.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. lyrata]
 gi|404358461|gb|AFR64223.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. lyrata]
 gi|404358463|gb|AFR64224.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. lyrata]
 gi|404358465|gb|AFR64225.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. lyrata]
 gi|404358467|gb|AFR64226.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. lyrata]
 gi|404358469|gb|AFR64227.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. lyrata]
 gi|404358471|gb|AFR64228.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. lyrata]
 gi|404358473|gb|AFR64229.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. lyrata]
 gi|404358475|gb|AFR64230.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. lyrata]
 gi|404358477|gb|AFR64231.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. lyrata]
 gi|404358479|gb|AFR64232.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. lyrata]
 gi|404358481|gb|AFR64233.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. lyrata]
 gi|404358483|gb|AFR64234.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. lyrata]
 gi|404358485|gb|AFR64235.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. lyrata]
 gi|404358487|gb|AFR64236.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. lyrata]
 gi|404358489|gb|AFR64237.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. lyrata]
 gi|404358491|gb|AFR64238.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. lyrata]
 gi|404358493|gb|AFR64239.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. lyrata]
 gi|404358495|gb|AFR64240.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. lyrata]
 gi|404358497|gb|AFR64241.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. lyrata]
 gi|404358499|gb|AFR64242.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. lyrata]
 gi|404358501|gb|AFR64243.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. lyrata]
 gi|404358503|gb|AFR64244.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358507|gb|AFR64246.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358511|gb|AFR64248.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358515|gb|AFR64250.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358519|gb|AFR64252.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358521|gb|AFR64253.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358525|gb|AFR64255.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358527|gb|AFR64256.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358529|gb|AFR64257.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358531|gb|AFR64258.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358535|gb|AFR64260.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358545|gb|AFR64265.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358547|gb|AFR64266.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358551|gb|AFR64268.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358553|gb|AFR64269.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358555|gb|AFR64270.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358563|gb|AFR64274.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358569|gb|AFR64277.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358571|gb|AFR64278.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358573|gb|AFR64279.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358583|gb|AFR64284.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358585|gb|AFR64285.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358587|gb|AFR64286.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358589|gb|AFR64287.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358591|gb|AFR64288.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358593|gb|AFR64289.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358595|gb|AFR64290.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358597|gb|AFR64291.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358599|gb|AFR64292.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358601|gb|AFR64293.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358603|gb|AFR64294.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358605|gb|AFR64295.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358607|gb|AFR64296.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358609|gb|AFR64297.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358611|gb|AFR64298.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358613|gb|AFR64299.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358615|gb|AFR64300.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358617|gb|AFR64301.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358619|gb|AFR64302.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358621|gb|AFR64303.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358623|gb|AFR64304.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358625|gb|AFR64305.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358627|gb|AFR64306.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358629|gb|AFR64307.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358631|gb|AFR64308.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358633|gb|AFR64309.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358635|gb|AFR64310.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358637|gb|AFR64311.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358639|gb|AFR64312.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358643|gb|AFR64314.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358645|gb|AFR64315.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358647|gb|AFR64316.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358649|gb|AFR64317.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358651|gb|AFR64318.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358653|gb|AFR64319.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358655|gb|AFR64320.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358657|gb|AFR64321.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358659|gb|AFR64322.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358661|gb|AFR64323.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358663|gb|AFR64324.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358665|gb|AFR64325.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358671|gb|AFR64328.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358673|gb|AFR64329.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358675|gb|AFR64330.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358679|gb|AFR64332.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358689|gb|AFR64337.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358695|gb|AFR64340.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
 gi|404358697|gb|AFR64341.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
          Length = 184

 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 44/73 (60%), Gaps = 7/73 (9%)

Query: 327 YGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVK 386
           Y SSE + G N+ P   P   ++ ++PN+ YFEF+P  +   +S++       V L +V+
Sbjct: 6   YASSESYFGINLKPMCKPSEVSYTIMPNMAYFEFLPHEVPTGKSEL-------VELADVE 58

Query: 387 VGEEYEIIVTNVA 399
           VG+EYE+++T  A
Sbjct: 59  VGKEYELVITTYA 71


>gi|404358193|gb|AFR64089.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
          Length = 184

 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 44/73 (60%), Gaps = 7/73 (9%)

Query: 327 YGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVK 386
           Y SSE + G N+ P   P   ++ ++PN+ YFEF+P  +   +S++       V L +V+
Sbjct: 6   YASSESYFGINLKPMCKPSEVSYTIMPNMAYFEFLPHEVPTGKSEL-------VELADVE 58

Query: 387 VGEEYEIIVTNVA 399
           VG+EYE+++T  A
Sbjct: 59  VGKEYELVITTYA 71


>gi|313206337|ref|YP_004045514.1| gh3 auxin-responsive promoter [Riemerella anatipestifer ATCC 11845
           = DSM 15868]
 gi|312445653|gb|ADQ82008.1| GH3 auxin-responsive promoter [Riemerella anatipestifer ATCC 11845
           = DSM 15868]
          Length = 508

 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 1/108 (0%)

Query: 10  VDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHE 69
           + + +++ +   K     Q+  L   L +     Y +  G    +  + F + VP+VT+E
Sbjct: 15  IRQRMDQIQNFVKHPIETQKGILFSQLFKAEETVYGKEYGFKNISSYQDFCNQVPIVTYE 74

Query: 70  DLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
           D +PYI+R   G+   I +G  I   ++SSGTT  K KF+P +DE +E
Sbjct: 75  DFEPYIERARKGEKDVIWSGY-IRKFAKSSGTTNAKSKFIPISDESLE 121


>gi|386321676|ref|YP_006017838.1| auxin-regulated protein [Riemerella anatipestifer RA-GD]
 gi|416110550|ref|ZP_11592128.1| putative auxin-regulated protein [Riemerella anatipestifer RA-YM]
 gi|315023203|gb|EFT36214.1| putative auxin-regulated protein [Riemerella anatipestifer RA-YM]
 gi|325336219|gb|ADZ12493.1| auxin-regulated protein [Riemerella anatipestifer RA-GD]
          Length = 508

 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 1/108 (0%)

Query: 10  VDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHE 69
           + + +++ +   K     Q+  L   L +     Y +  G    +  + F + VP+VT+E
Sbjct: 15  IRQRMDQIQNFVKHPIETQKGILFSQLFKAEETVYGKEYGFKNISSYQDFCNQVPIVTYE 74

Query: 70  DLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
           D +PYI+R   G+   I +G  I   ++SSGTT  K KF+P +DE +E
Sbjct: 75  DFEPYIERARKGEKDVIWSGY-IRKFAKSSGTTNAKSKFIPISDESLE 121


>gi|218131790|ref|ZP_03460594.1| hypothetical protein BACEGG_03411 [Bacteroides eggerthii DSM 20697]
 gi|217986093|gb|EEC52432.1| GH3 auxin-responsive promoter [Bacteroides eggerthii DSM 20697]
          Length = 505

 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 82/174 (47%), Gaps = 13/174 (7%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           ++E E  T  A  +Q   + +++   A+ E+ +          E FK  +P+ T+E+++P
Sbjct: 16  LKEIERYTDHASELQAGVMHRLIRMAANTEWGKKYDYASIRTYEDFKKRLPIQTYEEIKP 75

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDE-LMETTLQIFRTSYAFRNR 132
           Y+ R+  G+   +L    I   ++SSGTT  K KFLP + E L +T  Q  + + A    
Sbjct: 76  YVARLRAGE-QNLLWPSEIRWFAKSSGTTNDKSKFLPVSKESLQDTHYQGGKDAVAIY-- 132

Query: 133 EFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSP 186
              +G+    +F  G      KG +  G+ + N+  + +   ++ A+  Q   P
Sbjct: 133 ---LGQNPESRFFSG------KGLILGGSHSPNLNSNHSLVGDLSAILIQNVHP 177


>gi|404358517|gb|AFR64251.1| IAA-amido synthase, partial [Arabidopsis lyrata subsp. petraea]
          Length = 184

 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 44/73 (60%), Gaps = 7/73 (9%)

Query: 327 YGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVK 386
           Y SSE + G N+ P   P   ++ ++PN+ YFEF+P  +   +S++       V L +V+
Sbjct: 6   YASSESYFGINLKPMCKPSEVSYTIMPNMAYFEFLPHEVPTGKSEL-------VELADVE 58

Query: 387 VGEEYEIIVTNVA 399
           VG+EYE+++T  A
Sbjct: 59  VGKEYELVITTYA 71


>gi|153807266|ref|ZP_01959934.1| hypothetical protein BACCAC_01544 [Bacteroides caccae ATCC 43185]
 gi|149130386|gb|EDM21596.1| hypothetical protein BACCAC_01544 [Bacteroides caccae ATCC 43185]
          Length = 145

 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 57/107 (53%), Gaps = 1/107 (0%)

Query: 11  DELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHED 70
           D  +++ +     A  IQ   L +++ + A  E+ +    +     E F+  VP+ T+E+
Sbjct: 12  DSRLKQIDLYATQASEIQHSVLNRLVHQAAQTEWGKKYDYSSIRSYEDFRKRVPIQTYEE 71

Query: 71  LQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
           ++PY++R+  G+   +L    I   ++SSGTT  K KFLP + E ++
Sbjct: 72  IKPYVERLRAGE-QNLLWPSEIRWFAKSSGTTNDKSKFLPVSKEALQ 117


>gi|442314469|ref|YP_007355772.1| hypothetical protein G148_0774 [Riemerella anatipestifer RA-CH-2]
 gi|441483392|gb|AGC40078.1| hypothetical protein G148_0774 [Riemerella anatipestifer RA-CH-2]
          Length = 490

 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 1/74 (1%)

Query: 44  YLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQ 103
           Y +  G    +  + F + VP+VT+ED +PYI+R   G+   I +G  I   ++SSGTT 
Sbjct: 31  YGKEYGFKNISSYQDFCNQVPIVTYEDFEPYIERARKGEKDVIWSGY-IRKFAKSSGTTN 89

Query: 104 GKPKFLPFNDELME 117
            K KF+P +DE +E
Sbjct: 90  AKSKFIPISDESLE 103


>gi|383485641|ref|YP_005394553.1| gh3 auxin-responsive promoter [Riemerella anatipestifer ATCC 11845
           = DSM 15868]
 gi|380460326|gb|AFD56010.1| gh3 auxin-responsive promoter [Riemerella anatipestifer ATCC 11845
           = DSM 15868]
          Length = 490

 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 1/74 (1%)

Query: 44  YLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQ 103
           Y +  G    +  + F + VP+VT+ED +PYI+R   G+   I +G  I   ++SSGTT 
Sbjct: 31  YGKEYGFKNISSYQDFCNQVPIVTYEDFEPYIERARKGEKDVIWSGY-IRKFAKSSGTTN 89

Query: 104 GKPKFLPFNDELME 117
            K KF+P +DE +E
Sbjct: 90  AKSKFIPISDESLE 103


>gi|408673110|ref|YP_006872858.1| GH3 auxin-responsive promoter [Emticicia oligotrophica DSM 17448]
 gi|387854734|gb|AFK02831.1| GH3 auxin-responsive promoter [Emticicia oligotrophica DSM 17448]
          Length = 496

 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 73/145 (50%), Gaps = 9/145 (6%)

Query: 20  ITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRII 79
           + + AE +Q E   K++ + A   + ++         + FK  VP+  +EDL+PYI+R+ 
Sbjct: 23  MARSAE-VQAEWREKLVSQAAQTVFGRDHHFKDIHSYDDFKQAVPIRDYEDLKPYIKRVT 81

Query: 80  DGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFPIGKG 139
           +G+ + +  GKP+   +++SGTT G  K++P + + ++  +   R   A  N     G  
Sbjct: 82  EGEENILWNGKPL-YFAKTSGTTSGT-KYIPISKDSIDNHISSARN--ALLNYIHETGNS 137

Query: 140 KALQ----FIYGSKQSKTKGGLNAG 160
           K L     F+ GS +   K G+  G
Sbjct: 138 KFLDNKLIFLSGSPEMTEKAGIKTG 162


>gi|317474595|ref|ZP_07933869.1| hypothetical protein HMPREF1016_00848 [Bacteroides eggerthii
           1_2_48FAA]
 gi|316909276|gb|EFV30956.1| hypothetical protein HMPREF1016_00848 [Bacteroides eggerthii
           1_2_48FAA]
          Length = 505

 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 82/174 (47%), Gaps = 13/174 (7%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           ++E E  T  A  +Q   + +++   A+ E+ +          E FK  +P+ T+E+++P
Sbjct: 16  LKEIERYTDHASELQAGVMHRLIRMAANTEWGKKYDYASIRTYEDFKKRLPIQTYEEIKP 75

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDE-LMETTLQIFRTSYAFRNR 132
           Y+ R+  G+   +L    I   ++SSGTT  K KFLP + E L +T  Q  + + A    
Sbjct: 76  YVARLRAGE-QNLLWPSEIRWFAKSSGTTNDKSKFLPVSKESLQDTHYQGGKDAVAIY-- 132

Query: 133 EFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSP 186
              +G+    +F  G      KG +  G+ + N+  + +   ++ A+  Q   P
Sbjct: 133 ---LGQNPESRFFSG------KGLILGGSHSPNLNSNHSLVGDLSAILIQNVHP 177


>gi|326798142|ref|YP_004315961.1| GH3 auxin-responsive promoter [Sphingobacterium sp. 21]
 gi|326548906|gb|ADZ77291.1| GH3 auxin-responsive promoter [Sphingobacterium sp. 21]
          Length = 505

 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/227 (23%), Positives = 98/227 (43%), Gaps = 15/227 (6%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           I + E   K    +Q E  + ++    + E+ +        + E+FK  VP+  +  L+P
Sbjct: 16  IHQIELFMKYPHEVQEEWFQSLITTAQATEWGKKFDYKSICNLETFKERVPIQDYNSLKP 75

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTL----QIFRTSYAF 129
           YI R+I G+   +L    I   ++SSGTT  + KF+P ++E +E       +   + Y  
Sbjct: 76  YIDRMIAGE-QNLLWPSDIKWFAKSSGTTSDRSKFIPVSEEALEDCHFQGGKDLLSIYCH 134

Query: 130 RNREFPIGKGKALQFIYGSKQSKT-KGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPD- 187
              +  +  GK +      K ++   G  ++G  +  + R+  F AEM        +PD 
Sbjct: 135 NRPDAKVFTGKGVVLGGSHKINQLGNGDSSSGDLSAILIRNLPFWAEMYR------TPDL 188

Query: 188 EVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELV 234
           E    P+F + +    +  L+  E +  +      ++V A R  EL 
Sbjct: 189 ETTLNPNFEEKI--ERVANLVIHENVTNLSGVPTWNVVLAKRVLELT 233


>gi|338531809|ref|YP_004665143.1| hypothetical protein LILAB_10770 [Myxococcus fulvus HW-1]
 gi|337257905|gb|AEI64065.1| hypothetical protein LILAB_10770 [Myxococcus fulvus HW-1]
          Length = 554

 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 69/287 (24%), Positives = 117/287 (40%), Gaps = 18/287 (6%)

Query: 16  EFETITKDAERIQRETLRKILEENASAEYLQNL-GLNGRTDPESFKSCVPLVTHEDLQPY 74
            F    +  E  Q   L ++L+  A +   + + G         F+  V  VT + L P 
Sbjct: 20  RFHRALRQPEAAQAACLARVLQSVAGSLQAERIPGFRRVRSARDFQDAVQWVTPDALTPD 79

Query: 75  IQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELM-ETTLQIFRTSYAFRNRE 133
           ++RI  G    +LT +P+     S G++ G  K +P    L+ E    +    +   +R 
Sbjct: 80  VERIAAGQAR-VLTREPVLRFELSGGSS-GASKRVPMTRGLLSEFQRALAPMLFELLHRR 137

Query: 134 FPIGKGKALQFI--YGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCS-PDEVI 190
             + +G +   I     KQ++T GG+  G+A  + Y    F   ++ + S+  + P EV 
Sbjct: 138 PALREGASYWSISPLARKQARTAGGIPVGSAEDSAY----FSRLLRPLLSRIFAVPGEVG 193

Query: 191 FGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGV---- 246
             PD     Y   L  L+ RE++ L+       L       E   E L DD+ +G     
Sbjct: 194 ALPDVESCRYV-TLWHLVAREDLTLLSVWNPSFLTLLMAALERHGERLADDLAQGRCRPP 252

Query: 247 -LSSRITVPSIRAAMSKI-LKPNPELADLIHKKCSGLSNWYGLIPEL 291
              S   V + R  ++++   P+PE A L+     G  +   L P L
Sbjct: 253 ETGSTDAVAAQRTVLARMRFSPHPERASLLRAVLHGDWSARALWPRL 299


>gi|374599191|ref|ZP_09672193.1| GH3 auxin-responsive promoter [Myroides odoratus DSM 2801]
 gi|423324335|ref|ZP_17302176.1| hypothetical protein HMPREF9716_01533 [Myroides odoratimimus CIP
           103059]
 gi|373910661|gb|EHQ42510.1| GH3 auxin-responsive promoter [Myroides odoratus DSM 2801]
 gi|404608427|gb|EKB07891.1| hypothetical protein HMPREF9716_01533 [Myroides odoratimimus CIP
           103059]
          Length = 495

 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 69/142 (48%), Gaps = 6/142 (4%)

Query: 22  KDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDG 81
           K+    Q + L  ++E+     + Q+      TD + F   VP+  +E L+PY+ R++ G
Sbjct: 24  KNPVETQAKVLADLVEQAKHTAFGQDHNFTTITDAKMFAQQVPIRDYEGLKPYVDRVVKG 83

Query: 82  DISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFPIG---K 138
           +   +  GKP+   +++SGTT G  K++P   E M   ++  R +      E  I     
Sbjct: 84  EEDVLWKGKPL-YFAKTSGTTSG-AKYIPLTKESMPYHIEAARNAILAYVHETGIADFVD 141

Query: 139 GKALQFIYGSKQSKTKGGLNAG 160
           GK + F+ GS   + K G+N G
Sbjct: 142 GKMI-FLQGSPILEQKNGINLG 162


>gi|429740265|ref|ZP_19273960.1| GH3 auxin-responsive promoter [Prevotella saccharolytica F0055]
 gi|429153668|gb|EKX96444.1| GH3 auxin-responsive promoter [Prevotella saccharolytica F0055]
          Length = 502

 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 93/386 (24%), Positives = 157/386 (40%), Gaps = 72/386 (18%)

Query: 16  EFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYI 75
           E E     AE +Q + L+ ++      EY +    +     ESF S VP+ T+E+L+  I
Sbjct: 17  ELEAHVYAAEALQNKILKNLISRGRETEYGRKHLFDVMKGYESFTSHVPVNTYEELKNDI 76

Query: 76  QRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDE-LMETTLQIFRTSYAFRNREF 134
            R+  G+ S IL    I   ++SSGTT  K KF+P +DE L +   Q  +   A   R  
Sbjct: 77  DRMRHGE-SDILWPGRIRWYAKSSGTTNDKSKFIPISDEGLQQIHYQGGKDVVALYLRNN 135

Query: 135 PIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPD 194
           P            SK    KG +  G+ + N   S++   ++ A+  +  +P        
Sbjct: 136 P-----------KSKLFDGKGLILGGSHSPNYNISNSLVGDLSAILIENINP-------- 176

Query: 195 FHQSLYCHLLCGLI-FREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRIT- 252
                    L  L+   ++   + S F               E   D I    LS  +T 
Sbjct: 177 ---------LANLVRVPKKRTALLSDF---------------EVKRDAIARQTLSKNVTN 212

Query: 253 VPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAK--YLSGIMTGSMEHYL 310
           +  + + M  +L    EL+   H            + +++PN +  +  GI  G      
Sbjct: 213 LSGVPSWMLSVLVRVMELSGKAH------------LEDVWPNLEVFFHGGIAFGPYRDQY 260

Query: 311 KKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLES 370
           KKL     D+  M   Y +SEG+ G   +PS   + A   ++    ++EFIP  +   E+
Sbjct: 261 KKLI-TKPDMHYMET-YNASEGFFGIQDDPS---DDAMLLMVDYGVFYEFIP--MDEFEN 313

Query: 371 QVLCIEPKPVGLTEVKVGEEYEIIVT 396
           +     P  V L  V++G+ Y ++++
Sbjct: 314 E----HPTSVPLWGVELGKNYAMLIS 335


>gi|392598118|gb|EIW87440.1| hypothetical protein CONPUDRAFT_134583 [Coniophora puteana
           RWD-64-598 SS2]
          Length = 422

 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 95/226 (42%), Gaps = 31/226 (13%)

Query: 182 QCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDD 241
           +  SP  V F P +   L  H L  L     ++ + + F    V   R  E  W+ L   
Sbjct: 27  RATSPLAVSFIPQYRTFLLMHALFALA-DVRLETISTLFGTVFVDMIRYMEEEWDTLVAC 85

Query: 242 IREGVLSSRITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGI 301
           I  G L     V +I+  + K  +P PE A  + +       W   + +++PN K + GI
Sbjct: 86  IEHGTLPGYDGVEAIQPYLQKQWQPRPERAAELREVEVNSPTW---LHKIWPNLKVVVGI 142

Query: 302 MTGSMEHYLKKLRHYAGD-LPLMSADYGSSEGWIGA-------NVNPSLPPELATF--AV 351
            +G+    + K+R   GD + L S  + +SE ++G        N   ++  ++  +  A 
Sbjct: 143 ASGTFASVIPKMRMILGDTVYLRSLGFTASEAYVGTVYGHGDINCFKTVSDDIVEYLDAS 202

Query: 352 LPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN 397
           LP     +  P R         C+ P      EV+ G++YEII+T 
Sbjct: 203 LPEA---DQTPDR---------CVMP-----WEVEAGKQYEIILTT 231


>gi|373958184|ref|ZP_09618144.1| GH3 auxin-responsive promoter [Mucilaginibacter paludis DSM 18603]
 gi|373894784|gb|EHQ30681.1| GH3 auxin-responsive promoter [Mucilaginibacter paludis DSM 18603]
          Length = 501

 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 76/149 (51%), Gaps = 8/149 (5%)

Query: 16  EFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYI 75
           +   + K+A  +Q++T   ++++ +   + ++         + FK  VP+  +EDL+PYI
Sbjct: 18  QLNKLRKNAVSLQQKTFTGLIQQASETAFGKDHQFAAIKTYDDFKKNVPIRDYEDLRPYI 77

Query: 76  QRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP 135
            R+++G+ + +  GKP   ++++SGTT G  K++P + E M   ++  R   A  N    
Sbjct: 78  DRVVNGEENIMWPGKP-AYLAKTSGTTSG-VKYIPISKESMPEHIKAARN--ALLNYIHE 133

Query: 136 IGKGK----ALQFIYGSKQSKTKGGLNAG 160
            GK      ++ F+ GS     K G+  G
Sbjct: 134 TGKTDFVDGSMIFLQGSPILSEKHGIQVG 162


>gi|399023352|ref|ZP_10725413.1| coenzyme F390 synthetase [Chryseobacterium sp. CF314]
 gi|398083047|gb|EJL73778.1| coenzyme F390 synthetase [Chryseobacterium sp. CF314]
          Length = 504

 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 1/108 (0%)

Query: 10  VDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHE 69
           + + I++ +         Q+  L   L      EY +  G N  +  + FKS VP+VT+E
Sbjct: 15  IRQRIDQIQNFMNHPIETQKGILFSQLFHAEDTEYGKLYGFNSISSYQDFKSKVPMVTYE 74

Query: 70  DLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
           D +PYI++   G       G  I   ++SSGTT  K KF+P + E +E
Sbjct: 75  DFEPYIEKARQGHKDVSWPGS-IKHFAKSSGTTNAKSKFIPISTESLE 121


>gi|305665192|ref|YP_003861479.1| putative auxin-regulated protein [Maribacter sp. HTCC2170]
 gi|88709944|gb|EAR02176.1| putative auxin-regulated protein [Maribacter sp. HTCC2170]
          Length = 519

 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 1/102 (0%)

Query: 16  EFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYI 75
           + E   K  E +Q E L ++LE     E  +  G    ++ ++F+  VP+ ++E+++P I
Sbjct: 35  QIELFLKYPEEVQEEVLHQLLEIAEDTEIGKKYGFESISNYDTFRERVPITSYEEIEPLI 94

Query: 76  QRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
           +R   G+   I     I   ++SSGTT  K KF+P + E +E
Sbjct: 95  ERTRKGE-QNIFWPTSIKWFAKSSGTTNAKSKFIPVSSEALE 135


>gi|255533566|ref|YP_003093938.1| GH3 auxin-responsive promoter [Pedobacter heparinus DSM 2366]
 gi|255346550|gb|ACU05876.1| GH3 auxin-responsive promoter [Pedobacter heparinus DSM 2366]
          Length = 502

 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 1/104 (0%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           + + E   K    +Q E   K++      E+           P+ FK  VP+  ++ L+P
Sbjct: 16  VHQIELFMKYPHDVQEEWFHKLISSAEYTEWGMKYDYQSILSPQQFKERVPIQNYDTLKP 75

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
           YI+R++ G+   IL    I   ++SSGTT  + KF+P ++E ++
Sbjct: 76  YIERMLKGE-QNILWSSEIKWFAKSSGTTSDRSKFIPVSEESLQ 118


>gi|294783749|ref|ZP_06749073.1| auxin-responsive GH3-related protein [Fusobacterium sp. 1_1_41FAA]
 gi|294480627|gb|EFG28404.1| auxin-responsive GH3-related protein [Fusobacterium sp. 1_1_41FAA]
          Length = 515

 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 2/89 (2%)

Query: 27  IQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPI 86
           IQ   L++ILE N ++ Y +    N     E F+  VPL T+ED  PYI++I +G+   I
Sbjct: 34  IQENKLKEILENNKNSLYGKKYNFNKIKTIEDFQREVPLTTYEDYLPYIEKIKNGE-EHI 92

Query: 87  LTGKPITTISRSSGTTQGKPKFLPFNDEL 115
           LT + +     +SG+T    K +P+ D L
Sbjct: 93  LTYEKVKMFELTSGSTSA-SKLIPYTDSL 120


>gi|167764092|ref|ZP_02436219.1| hypothetical protein BACSTE_02475 [Bacteroides stercoris ATCC
           43183]
 gi|167698208|gb|EDS14787.1| GH3 auxin-responsive promoter [Bacteroides stercoris ATCC 43183]
          Length = 505

 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 58/106 (54%), Gaps = 1/106 (0%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           ++E E  T+ A  +Q   L++++   A+ E+ +          E FK  +P+ T+E+++P
Sbjct: 16  LKEIELYTEHAGELQAGVLKRLVRMAANTEWGKKYDYASIRTYEDFKKRLPIQTYEEIKP 75

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETT 119
           Y+ R+  G+   +L    I   ++SSGTT  K KFLP + E ++ T
Sbjct: 76  YVARLRAGE-QNLLWPSEICWFAKSSGTTNDKSKFLPVSKESLQDT 120


>gi|387793505|ref|YP_006258570.1| GH3 auxin-responsive promoter-binding protein [Solitalea canadensis
           DSM 3403]
 gi|379656338|gb|AFD09394.1| GH3 auxin-responsive promoter-binding protein [Solitalea canadensis
           DSM 3403]
          Length = 507

 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 1/104 (0%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           I + E   K    +Q+E L  ++    + E+           P  FK   P+  ++ L+P
Sbjct: 16  IHQIELFMKYPLEVQQEWLSDLVNTARNTEWGLKHDFRSIDSPSDFKQRFPIQNYDSLKP 75

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
           YI+R++ G+   IL    IT  ++SSGTT  K KF+P ++E +E
Sbjct: 76  YIERMMKGE-KNILWSSNITWFAKSSGTTSDKSKFIPVSEESLE 118


>gi|218259358|ref|ZP_03475108.1| hypothetical protein PRABACTJOHN_00765 [Parabacteroides johnsonii
           DSM 18315]
 gi|218225150|gb|EEC97800.1| hypothetical protein PRABACTJOHN_00765 [Parabacteroides johnsonii
           DSM 18315]
          Length = 504

 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 1/103 (0%)

Query: 15  EEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPY 74
           +E     +DA+ IQ + L+ +L    + E+              F   +PL T++D++PY
Sbjct: 17  KEIAKFAQDADAIQHKQLKSLLSTARNTEWGLKYDYKSIQGYADFCERIPLQTYDDIKPY 76

Query: 75  IQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
           + R+I+G+ + IL    +   ++SSGTT  K KFLP   E+++
Sbjct: 77  VTRMINGEKN-ILWPSVVRWYAKSSGTTNDKSKFLPVTPEILK 118


>gi|423342340|ref|ZP_17320054.1| hypothetical protein HMPREF1077_01484 [Parabacteroides johnsonii
           CL02T12C29]
 gi|409218254|gb|EKN11226.1| hypothetical protein HMPREF1077_01484 [Parabacteroides johnsonii
           CL02T12C29]
          Length = 504

 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 1/103 (0%)

Query: 15  EEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPY 74
           +E     +DA+ IQ + L+ +L    + E+              F   +PL T++D++PY
Sbjct: 17  KEIAKFAQDADAIQHKQLKSLLSTARNTEWGLKYDYKSIQGYADFCERIPLQTYDDIKPY 76

Query: 75  IQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
           + R+I+G+ + IL    +   ++SSGTT  K KFLP   E+++
Sbjct: 77  VTRMINGEKN-ILWPSVVRWYAKSSGTTNDKSKFLPVTPEILK 118


>gi|387790165|ref|YP_006255230.1| coenzyme F390 synthetase [Solitalea canadensis DSM 3403]
 gi|379652998|gb|AFD06054.1| coenzyme F390 synthetase [Solitalea canadensis DSM 3403]
          Length = 499

 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 73/140 (52%), Gaps = 6/140 (4%)

Query: 24  AERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDI 83
           A  +Q++ +++++ E     +    G       + FK+ VP+  +E L+PYI++++ GD 
Sbjct: 26  AVDLQQKWMQQLISEAKGTLFGLEHGFTSIQTYDDFKNKVPVRDYEQLKPYIEKVVHGDR 85

Query: 84  SPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTS---YAFRNREFPIGKGK 140
           + +  GKP+   +++SGTT G  K++P + E M   +   R +   Y     +     GK
Sbjct: 86  NILWPGKPL-YFAKTSGTTSG-VKYIPISKESMPAHINAARNALLLYIAETDKADFVNGK 143

Query: 141 ALQFIYGSKQSKTKGGLNAG 160
            + F+ GS + + K G++ G
Sbjct: 144 MI-FLQGSPEMQEKNGVHVG 162


>gi|423346707|ref|ZP_17324395.1| hypothetical protein HMPREF1060_02067 [Parabacteroides merdae
           CL03T12C32]
 gi|409219858|gb|EKN12818.1| hypothetical protein HMPREF1060_02067 [Parabacteroides merdae
           CL03T12C32]
          Length = 504

 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 56/103 (54%), Gaps = 1/103 (0%)

Query: 15  EEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPY 74
           +E     +DA+ IQ + L+ +L    + E+          +   F   +PL T++D++PY
Sbjct: 17  KEIARFAQDADAIQHKQLKSLLSTARNTEWGLKHDYKSIQEYADFCERIPLQTYDDIKPY 76

Query: 75  IQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
           + R+I+G+ + IL    +   ++SSGTT  K KFLP   E+++
Sbjct: 77  VTRMINGERN-ILWPSVVRWYAKSSGTTNDKSKFLPVTPEILK 118


>gi|313147998|ref|ZP_07810191.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|423281235|ref|ZP_17260146.1| hypothetical protein HMPREF1203_04363 [Bacteroides fragilis HMW
           610]
 gi|424665830|ref|ZP_18102866.1| hypothetical protein HMPREF1205_01705 [Bacteroides fragilis HMW
           616]
 gi|313136765|gb|EFR54125.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|404574083|gb|EKA78834.1| hypothetical protein HMPREF1205_01705 [Bacteroides fragilis HMW
           616]
 gi|404583399|gb|EKA88080.1| hypothetical protein HMPREF1203_04363 [Bacteroides fragilis HMW
           610]
          Length = 503

 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/179 (23%), Positives = 84/179 (46%), Gaps = 17/179 (9%)

Query: 11  DELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHED 70
           D  ++  +     A  IQ   L +++++  + E+ +        + E FK+ +P+ T+E+
Sbjct: 12  DSRLKAIDLYDTQAGDIQHRVLTRLVKQAENTEWGKKYDYKSIRNYEDFKNRLPIQTYEE 71

Query: 71  LQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFR 130
           ++PY++R+  G+   +L    I   ++SSGTT  K KFLP + E             A +
Sbjct: 72  VKPYVERLRAGE-QNLLWPSEIRWFAKSSGTTNDKSKFLPVSKE-------------ALQ 117

Query: 131 NREFPIGKGKALQFIYGSKQSK---TKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSP 186
           +  +  GK  A  +   +  S+    KG +  G+ + N+  + +   ++ A+  Q  SP
Sbjct: 118 DIHYRGGKDAAAIYFRMNPDSRFFSGKGLILGGSHSPNLNSNHSLVGDLSAILIQNVSP 176


>gi|333381384|ref|ZP_08473066.1| hypothetical protein HMPREF9455_01232 [Dysgonomonas gadei ATCC
           BAA-286]
 gi|332830354|gb|EGK02982.1| hypothetical protein HMPREF9455_01232 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 503

 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 89/382 (23%), Positives = 148/382 (38%), Gaps = 89/382 (23%)

Query: 28  QRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPIL 87
           Q + L  +L   A     Q    +   + + F+  VP+  +EDL+PY+ +I+      +L
Sbjct: 28  QEKILSYLLRNGAQTLIGQQYNFSSIKNKDDFRKRVPVFHYEDLRPYLDKILIDKQQSVL 87

Query: 88  TGKPITTISRSSGTTQGKPKFLPFNDELM--------ETTLQIFRTSYAFRNREFPIGKG 139
             KPI   + SSGTT+ K K++P   E +        E  L I+    A     F  GK 
Sbjct: 88  WNKPIKWFAMSSGTTEDKSKYIPVTQESLTKGHYKCGEQMLAIY--GQANHKARFFFGKT 145

Query: 140 KALQFIYGSKQSKTKG-GLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQS 198
             L    GSKQ    G G+  G  +  + ++  F A+      +  +P+ +   PD+   
Sbjct: 146 LVLG---GSKQINNIGDGIFTGDISAILIKNLYFWAK------RSRTPESISLLPDW--- 193

Query: 199 LYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPSIRA 258
                        E++L                    + L D   +  + + + VPS   
Sbjct: 194 -------------EVKL--------------------QALADYAVKNDVRAFMGVPSWLL 220

Query: 259 AMSKILKPNP--ELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRHY 316
            + K +K +   EL D+          W  L  E+F    +  G+     E   KK+   
Sbjct: 221 VLLKKIKADTGRELTDI----------WPNL--EVF----FHGGVSFTPFEEQYKKIIQ- 263

Query: 317 AGDLPLMS--ADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLC 374
               P M     Y +SEG+ G   +      L    +L +  Y+EF+P    N E+    
Sbjct: 264 ---KPEMRYWETYNASEGFFGVQFSDKSKDML---LMLDSGIYYEFVPMSEWNSEN---- 313

Query: 375 IEPKPVGLTEVKVGEEYEIIVT 396
             PK   L EV+ G+ Y ++++
Sbjct: 314 --PKTQTLDEVETGQNYALLIS 333


>gi|332876590|ref|ZP_08444350.1| GH3 auxin-responsive promoter [Capnocytophaga sp. oral taxon 329
           str. F0087]
 gi|332685423|gb|EGJ58260.1| GH3 auxin-responsive promoter [Capnocytophaga sp. oral taxon 329
           str. F0087]
          Length = 503

 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 81/176 (46%), Gaps = 6/176 (3%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           I++ +   +   R+Q   L ++     + E  +       T+ + F    PL T+E  +P
Sbjct: 18  IDQIQEFVQHPHRVQERVLLELTNAAKNTELGKAYNFGEVTNYQQFIRNTPLTTYESFEP 77

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME----TTLQIFRTSYAF 129
           +++R   G+ + I    PI   ++SSGTT  K KF+P ++E ++     + +     Y  
Sbjct: 78  FVERARRGERN-IFWHTPIKWFAKSSGTTNAKSKFIPVSEEALQQCHYKSGKDMLCLYLN 136

Query: 130 RNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCS 185
            N +  + KGK+L+ + GSK+   + G   G  +  +  +  F AE+    S   S
Sbjct: 137 NNEDSNLFKGKSLR-LGGSKELYEQNGTYFGDLSAILIENLPFWAELSCTPSNKVS 191


>gi|365121591|ref|ZP_09338508.1| hypothetical protein HMPREF1033_01854 [Tannerella sp.
           6_1_58FAA_CT1]
 gi|363645309|gb|EHL84578.1| hypothetical protein HMPREF1033_01854 [Tannerella sp.
           6_1_58FAA_CT1]
          Length = 502

 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 57/100 (57%), Gaps = 1/100 (1%)

Query: 15  EEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPY 74
           ++ +   +  + IQ++ L  +LE   + E  +        D ++F   VPL+T+E+L+PY
Sbjct: 16  KQIDLFERYGDEIQKKQLYSLLETAQNTEIGKLYRFKKIPDYKTFSEQVPLITYEELKPY 75

Query: 75  IQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDE 114
           ++R++ G+ + I   K +   ++SSGTT  K KF+P + E
Sbjct: 76  VERMLKGENNLIWPSK-VRWFAKSSGTTNDKSKFIPVSKE 114


>gi|392968893|ref|ZP_10334309.1| GH3 auxin-responsive promoter [Fibrisoma limi BUZ 3]
 gi|387843255|emb|CCH56363.1| GH3 auxin-responsive promoter [Fibrisoma limi BUZ 3]
          Length = 507

 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 1/100 (1%)

Query: 18  ETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQR 77
           E + K    +Q+    +++      E+ +          E F+  VP+ ++EDL PYI+R
Sbjct: 20  EAMKKHPGEVQQRVFNQLIGRGRRTEWGRRYHYKSIRTVEDFQRQVPVSSYEDLFPYIER 79

Query: 78  IIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
           ++ G+ + +L   P+   S+SSGTT  + KF+P   E ++
Sbjct: 80  VMKGE-NNVLWPSPVRWFSKSSGTTNARSKFIPVTSESLD 118


>gi|407451802|ref|YP_006723526.1| hypothetical protein B739_1027 [Riemerella anatipestifer RA-CH-1]
 gi|403312785|gb|AFR35626.1| hypothetical protein B739_1027 [Riemerella anatipestifer RA-CH-1]
          Length = 490

 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 1/74 (1%)

Query: 44  YLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQ 103
           Y +  G    +  + F + VP+VT+ED +PYI+R   G+   I  G  I   ++SSGTT 
Sbjct: 31  YGREYGFRNISSYQDFCNQVPIVTYEDFEPYIERARKGERDVIWNG-FIRKFAKSSGTTN 89

Query: 104 GKPKFLPFNDELME 117
            K KF+P +DE +E
Sbjct: 90  AKSKFIPISDESLE 103


>gi|154493470|ref|ZP_02032790.1| hypothetical protein PARMER_02809 [Parabacteroides merdae ATCC
           43184]
 gi|423723254|ref|ZP_17697407.1| hypothetical protein HMPREF1078_01467 [Parabacteroides merdae
           CL09T00C40]
 gi|154086680|gb|EDN85725.1| GH3 auxin-responsive promoter [Parabacteroides merdae ATCC 43184]
 gi|409241679|gb|EKN34447.1| hypothetical protein HMPREF1078_01467 [Parabacteroides merdae
           CL09T00C40]
          Length = 504

 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 1/103 (0%)

Query: 15  EEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPY 74
           +E     +DA+ IQ + L+ +L    + E+              F   +PL T++D++PY
Sbjct: 17  KEIARFAQDADAIQHKQLKSLLSTARNTEWGLKYDYKSIQGYADFCERIPLQTYDDIKPY 76

Query: 75  IQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
           + R+I+G+ + IL    +   ++SSGTT  K KFLP   E+++
Sbjct: 77  VTRMINGERN-ILWPSVVRWYAKSSGTTNDKSKFLPVTPEILK 118


>gi|340351530|ref|ZP_08674443.1| GH3 auxin-responsive promoter family protein [Prevotella pallens
           ATCC 700821]
 gi|339617892|gb|EGQ22503.1| GH3 auxin-responsive promoter family protein [Prevotella pallens
           ATCC 700821]
          Length = 504

 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 87/389 (22%), Positives = 159/389 (40%), Gaps = 74/389 (19%)

Query: 16  EFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYI 75
           E E      E +Q E L+ +++     EY +    +   +   F   +PL T+E+L+ YI
Sbjct: 18  ELERYINKGEEMQHEILQYLVKRGKDTEYGRKYLFSTINNYNDFAQNIPLNTYEELKGYI 77

Query: 76  QRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP 135
            R+  G+ + +  G+ +   ++SSGTT  K KF+P   E               +N  + 
Sbjct: 78  DRMRHGERNILWPGQ-VKWYAKSSGTTNDKSKFIPITHE-------------GLQNVHYQ 123

Query: 136 IGKGKALQFIYGSKQSKT---KGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFG 192
            GK     ++  +  SK    KG +  G+ + N   S++   ++ A+  +  +P      
Sbjct: 124 GGKDVLAYYLSNNPNSKLFSGKGLILGGSHSPNYNFSNSLVGDLSAILIENINP------ 177

Query: 193 PDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRIT 252
                      L  L+                V     FE+  + +  +    V+S  +T
Sbjct: 178 -----------LANLV----------RVPSKEVALLSDFEVKRDRMAKE----VISQNVT 212

Query: 253 -VPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGI-MTGSMEHYL 310
            +  + + M  +L    EL+   H +      W  L  E+F    +  GI  T   E Y 
Sbjct: 213 NISGVPSWMLSVLLRVMELSGKKHLQ----EVWQNL--EVF----FHGGISFTPYREQYE 262

Query: 311 KKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIG-YFEFIPQRLGNLE 369
           + +     D+  M   Y +SEG+ G   +P+      + +++ + G Y+EF+P  +   E
Sbjct: 263 QLIS--KQDMQYMET-YNASEGFFGIQDDPN----DKSMSLMLDYGVYYEFLP--MDEFE 313

Query: 370 SQVLCIEPKPVGLTEVKVGEEYEIIVTNV 398
           S+    +P  V L  V++G  Y II++ V
Sbjct: 314 SE----KPNIVPLEGVEIGRNYAIIISTV 338


>gi|404450339|ref|ZP_11015323.1| GH3 auxin-responsive promoter-binding protein [Indibacter
           alkaliphilus LW1]
 gi|403764075|gb|EJZ24991.1| GH3 auxin-responsive promoter-binding protein [Indibacter
           alkaliphilus LW1]
          Length = 505

 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 71/158 (44%), Gaps = 14/158 (8%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           I + E   K   R Q+    ++LE   + E+ +    +     E F   VP+  +E ++P
Sbjct: 16  IGQIENFKKQPFRAQKNVFDELLEFGKTTEFGKKHHFDRINSYEEFAQAVPIHDYEQMKP 75

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME--------TTLQIFRT 125
           YI++ + G    ++   PI   S+SSGTT  + KF+P + E +E          L I+  
Sbjct: 76  YIEKTMKGH-QNVIWPTPIEWFSKSSGTTSSRSKFIPVSQESLEDCHFKAGKDMLSIYMN 134

Query: 126 SY----AFRNREFPIGKGKALQFIYGSKQSKTKGGLNA 159
           +Y     F  +   IG G   + +  S +S   G ++A
Sbjct: 135 NYPDSKLFAGKNLTIG-GSLTKNLSASNKSSQVGDISA 171


>gi|373952941|ref|ZP_09612901.1| GH3 auxin-responsive promoter [Mucilaginibacter paludis DSM 18603]
 gi|373889541|gb|EHQ25438.1| GH3 auxin-responsive promoter [Mucilaginibacter paludis DSM 18603]
          Length = 510

 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 54/104 (51%), Gaps = 1/104 (0%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           I + E   K    +Q E   +++    + E+ +        +   FK  VP+ T++ L+P
Sbjct: 16  IHQIELFQKFPNEVQAEWFEQLIASAENTEWGKQYHYRNIENVSQFKQRVPIQTYDTLKP 75

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
           YI+R+I G+   IL    I   ++SSGTT  + KF+P ++E +E
Sbjct: 76  YIERMIKGE-QNILWPSEIRWFAKSSGTTNDRSKFIPVSEESLE 118


>gi|300727556|ref|ZP_07060947.1| GH3 auxin-responsive promoter superfamily [Prevotella bryantii B14]
 gi|299775259|gb|EFI71860.1| GH3 auxin-responsive promoter superfamily [Prevotella bryantii B14]
          Length = 503

 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 52/96 (54%), Gaps = 1/96 (1%)

Query: 15  EEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPY 74
           +E E     AE +Q++ L  ++E     EY +N  L    + E F   +P+ T+E+++ Y
Sbjct: 16  KELEKYNTAAEELQQKVLSSLIESGRETEYGRNHLLKNTHNYEQFAQNIPINTYEEMKGY 75

Query: 75  IQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLP 110
           I R+  G+ + +  G  +   ++SSGTT  K KF+P
Sbjct: 76  IDRMRHGEQNVLWPGG-VKWYAKSSGTTNDKSKFIP 110


>gi|228473976|ref|ZP_04058717.1| GH3 auxin-responsive promoter family protein [Capnocytophaga
           gingivalis ATCC 33624]
 gi|228274490|gb|EEK13331.1| GH3 auxin-responsive promoter family protein [Capnocytophaga
           gingivalis ATCC 33624]
          Length = 509

 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 1/104 (0%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           I++ E   K    +Q     K+LE   S E  +        + E F S +P+  +ED++P
Sbjct: 18  IDQIEEFIKRPHEVQENVCAKLLEAAQSTEMGKQYDFISIRNYEDFASRIPISIYEDIEP 77

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
            I+R   G+   +    PI   ++SSGTT  K KF+P ++E ++
Sbjct: 78  MIERARRGE-QNLFWRTPIKWFAKSSGTTNAKSKFIPVSEEALQ 120


>gi|88801940|ref|ZP_01117468.1| putative auxin-regulated protein [Polaribacter irgensii 23-P]
 gi|88782598|gb|EAR13775.1| putative auxin-regulated protein [Polaribacter irgensii 23-P]
          Length = 502

 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 69/138 (50%), Gaps = 10/138 (7%)

Query: 28  QRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPIL 87
           Q +  + ++ +     + ++   +  ++   FK  VP+  +E L+PY+ R++ G+   + 
Sbjct: 30  QEKVFKNLISKGGKTAFGKDHNFDTISNYNDFKKAVPVTDYEGLRPYVDRMVAGESDVLW 89

Query: 88  TGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAF-----RNREFPIGKGKAL 142
            GKP+   +++SGTT G  K++P   E M T ++  + +  F     ++  F  GK   +
Sbjct: 90  IGKPL-YFAKTSGTTSG-AKYIPITKESMPTHIKAAKNALLFYIIAKKDASFVDGK---M 144

Query: 143 QFIYGSKQSKTKGGLNAG 160
            F+ GS   + K G+  G
Sbjct: 145 IFLQGSPVLQEKNGVKLG 162


>gi|402831270|ref|ZP_10879960.1| GH3 auxin-responsive promoter [Capnocytophaga sp. CM59]
 gi|402282709|gb|EJU31244.1| GH3 auxin-responsive promoter [Capnocytophaga sp. CM59]
          Length = 508

 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 1/104 (0%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           I++ E   K    +Q     K+LE   S E  +        + E F + +P+  +ED++P
Sbjct: 18  IDQIEEFIKRPHEVQENVCAKLLEAAQSTEMGKQYDFISIRNYEDFAARIPISIYEDIEP 77

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
            I+R   G+   +    PI   ++SSGTT  K KF+P ++E +E
Sbjct: 78  MIERARRGE-ENLFWRTPIKWFAKSSGTTNAKSKFIPVSEEALE 120


>gi|395802584|ref|ZP_10481836.1| GH3 auxin-responsive promoter [Flavobacterium sp. F52]
 gi|395435025|gb|EJG00967.1| GH3 auxin-responsive promoter [Flavobacterium sp. F52]
          Length = 495

 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 55/99 (55%), Gaps = 2/99 (2%)

Query: 28  QRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPIL 87
           Q++  + ++E   + E+ ++   N     E F+  VP+  +EDL+PY+ +++ G+   + 
Sbjct: 30  QQKIFKNLIENAQNTEFGKDHHFNQIKTFEDFQKRVPVRDYEDLKPYVDKVVKGESDILW 89

Query: 88  TGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTS 126
            GKP+   +++SGTT G  KF+P   E M   ++  R +
Sbjct: 90  KGKPL-YFAKTSGTTSG-AKFIPLTKESMPYHIEAARNA 126


>gi|330996548|ref|ZP_08320430.1| GH3 auxin-responsive promoter [Paraprevotella xylaniphila YIT
           11841]
 gi|329573104|gb|EGG54723.1| GH3 auxin-responsive promoter [Paraprevotella xylaniphila YIT
           11841]
          Length = 509

 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 57/106 (53%), Gaps = 4/106 (3%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           I ++E  T   E +Q   L K++ +    E+ Q  G     D +SF    P+ T+E+L+ 
Sbjct: 18  ISKYENQT---EELQLNVLHKLICQAIHTEWGQTHGFAQVKDYDSFTKTSPVNTYEELKS 74

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETT 119
           YI R+  G+   + +G+ +   ++SSGTT  K KF+P + E ++ T
Sbjct: 75  YIDRMRHGEKDVLWSGQ-VRWYAKSSGTTNDKSKFIPVSKECLQDT 119


>gi|326336338|ref|ZP_08202509.1| GH3 auxin-responsive promoter family protein [Capnocytophaga sp.
           oral taxon 338 str. F0234]
 gi|325691512|gb|EGD33480.1| GH3 auxin-responsive promoter family protein [Capnocytophaga sp.
           oral taxon 338 str. F0234]
          Length = 508

 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 1/105 (0%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           I++ E   K    +Q     K+LE   + E  +        + E F S +P+  +ED++P
Sbjct: 18  IDQIEEFIKHPHEVQENVCAKLLEAAQATEMGKKYDFISIRNYEDFASRIPITIYEDIEP 77

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMET 118
            I+R   G+   +    PI   ++SSGTT  K KF+P ++E ++ 
Sbjct: 78  MIERARRGE-QNLFWCTPIKWFAKSSGTTNAKSKFIPVSEEALQN 121


>gi|365875983|ref|ZP_09415508.1| auxin-regulated protein [Elizabethkingia anophelis Ag1]
 gi|442588574|ref|ZP_21007385.1| auxin-regulated protein [Elizabethkingia anophelis R26]
 gi|365756495|gb|EHM98409.1| auxin-regulated protein [Elizabethkingia anophelis Ag1]
 gi|442561808|gb|ELR79032.1| auxin-regulated protein [Elizabethkingia anophelis R26]
          Length = 504

 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 77/154 (50%), Gaps = 10/154 (6%)

Query: 12  ELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDL 71
           + ++  E  T++A   Q   L+ ++ +  + ++ +  G     + + F+S VPL  +EDL
Sbjct: 16  QYVKSSEKFTRNAVSNQENLLKNLITKAVNTKFGKEHGFGSIRNIQDFQSKVPLADYEDL 75

Query: 72  QPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAF-- 129
           + YI+ I +G+   +  G+P    +++SGTT G  K++P + E M   +   R++  F  
Sbjct: 76  KNYIEEIKEGEKDILWPGQP-EYFAKTSGTTSGS-KYIPISKEAMPYQIDAARSALFFYI 133

Query: 130 ---RNREFPIGKGKALQFIYGSKQSKTKGGLNAG 160
               N +F  GK   + F+ GS +     G+  G
Sbjct: 134 AQKDNADFVNGK---MIFLQGSPELTDLHGIKTG 164


>gi|300770904|ref|ZP_07080781.1| GH3 auxin-responsive promoter family protein [Sphingobacterium
           spiritivorum ATCC 33861]
 gi|300762177|gb|EFK58996.1| GH3 auxin-responsive promoter family protein [Sphingobacterium
           spiritivorum ATCC 33861]
          Length = 504

 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 82/408 (20%), Positives = 165/408 (40%), Gaps = 80/408 (19%)

Query: 1   MLEKMETVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFK 60
           +L  + T  + + + + +   K    +Q E  + ++    + E+ +         PE FK
Sbjct: 3   LLNSLFTWFLKKRMHQIDLFIKYPHEVQEEWFQSLISTAEATEWGKKYDYKSILTPEEFK 62

Query: 61  SCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTL 120
             VP+  ++ ++ Y+ R+I G+   IL    I   ++SSGTT  K KF+P ++E +E   
Sbjct: 63  ERVPIQDYDSIKGYVDRMIKGE-QNILWPSDIKWFAKSSGTTADKSKFIPVSEEALE--- 118

Query: 121 QIFRTSYAFRNREFPIGKGKALQFIYGSKQSKT-----KGGLNAGTATTNVYRSSTFKAE 175
                       E     GK +  IY   + +      K  +  G++  N + S ++  +
Sbjct: 119 ------------ECHYQGGKDMLSIYCHNRPENKLFTGKSVVLGGSSQINSFNSDSYYGD 166

Query: 176 MKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVW 235
           + ++  +      + F  +F ++    +     F E+I+ + +                 
Sbjct: 167 LSSILIR-----NLPFWAEFKRTPNTEVTLNPNFEEKIENIANI---------------- 205

Query: 236 EELCDDIREGVLSSRITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNA 295
                 I+E V +S   VP+    M+K +            + +G SN    + E++PN 
Sbjct: 206 -----TIKENV-TSLAGVPTWNVVMAKRI-----------LEITGKSN----LLEVWPNL 244

Query: 296 KYLS--GIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGAN--VNPSLPPELATFAV 351
           ++ S  G+         KKL     +      +Y +SEG+       +      +  + V
Sbjct: 245 EFYSHGGVSFKPYREQFKKL--IPSENMYYLENYNASEGYFALQDRSDSDDLLLMLDYGV 302

Query: 352 LPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
                Y+EF+P  + NL  +     PK + L +V++G+ Y +I++  A
Sbjct: 303 -----YYEFLP--IENLHDE----HPKTLSLDQVEIGKNYALIISTNA 339


>gi|340618423|ref|YP_004736877.1| hypothetical protein zobellia_2445 [Zobellia galactanivorans]
 gi|339733220|emb|CAZ96595.1| Conserved hypothetical protein [Zobellia galactanivorans]
          Length = 504

 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 51/91 (56%), Gaps = 1/91 (1%)

Query: 27  IQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPI 86
           +Q E L ++LE     E  +  G     + E+F+  +P+V++E+++P I+R   G+   I
Sbjct: 31  VQEEVLHQLLEIAEDTETGRRYGFESINNYETFRERLPIVSYEEMEPIIERTRRGE-QNI 89

Query: 87  LTGKPITTISRSSGTTQGKPKFLPFNDELME 117
                I   ++SSGTT  K KF+P ++E +E
Sbjct: 90  FWPTSIKWFAKSSGTTNAKSKFIPVSEEALE 120


>gi|124009841|ref|ZP_01694509.1| putative auxin-regulated protein [Microscilla marina ATCC 23134]
 gi|123984162|gb|EAY24523.1| putative auxin-regulated protein [Microscilla marina ATCC 23134]
          Length = 493

 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 53/93 (56%), Gaps = 1/93 (1%)

Query: 25  ERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDIS 84
           + +Q+    K++E   + E+ +          E F+  VP+ ++EDL PYI+R++ G+ +
Sbjct: 16  DEVQKRMFTKLVELAKNTEWGKKYHYKDIRRFEQFQERVPISSYEDLYPYIERMLKGEQN 75

Query: 85  PILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
            + + K I   ++SSGTT  + KF+P + E ++
Sbjct: 76  VLWSSK-INWFAKSSGTTNARSKFIPVSRETLQ 107


>gi|198275417|ref|ZP_03207948.1| hypothetical protein BACPLE_01580 [Bacteroides plebeius DSM 17135]
 gi|198271753|gb|EDY96023.1| GH3 auxin-responsive promoter [Bacteroides plebeius DSM 17135]
          Length = 501

 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 80/173 (46%), Gaps = 14/173 (8%)

Query: 15  EEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPY 74
           +E +     AE IQ    RK++ + ++ E+      N   D   F+  VP+ T+ED++ Y
Sbjct: 16  KEIDLYGTKAEEIQARVFRKLIHKASATEWGMRYDYNHIQDYTDFQR-VPIQTYEDVKGY 74

Query: 75  IQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFN-DELMETTLQIFRTSYAFRNRE 133
           + R+  G+ + +  GK +   ++SSGTT  K KF+P + D L E   +    + A   RE
Sbjct: 75  VDRMRHGERNVLWPGK-VIWYAKSSGTTNDKSKFIPVSPDGLKEIHYRGGIDAVALYLRE 133

Query: 134 FPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSP 186
            P  +     F  G      KG +  G+ + N     +   ++ A+  Q  SP
Sbjct: 134 NPESR-----FFSG------KGLILGGSHSPNYNVKDSLVGDLSAILIQNISP 175


>gi|110640036|ref|YP_680246.1| auxin-regulated protein [Cytophaga hutchinsonii ATCC 33406]
 gi|110282717|gb|ABG60903.1| auxin-regulated protein [Cytophaga hutchinsonii ATCC 33406]
          Length = 504

 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 1/90 (1%)

Query: 28  QRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPIL 87
           Q+  L+ +L++ A  E+ +  G       E F   VP+ T+E   P+I+R + G+   IL
Sbjct: 31  QQRVLKNLLQQAALTEWGKTHGYKDIQSNEQFAQQVPVSTYETFYPWIERCLKGE-QQIL 89

Query: 88  TGKPITTISRSSGTTQGKPKFLPFNDELME 117
               I   S+SSGTT  K KF+P + E ++
Sbjct: 90  WQSDIDWFSKSSGTTNAKSKFIPVSKESLK 119


>gi|323343674|ref|ZP_08083901.1| GH3 auxin-responsive promoter family protein [Prevotella oralis
           ATCC 33269]
 gi|323095493|gb|EFZ38067.1| GH3 auxin-responsive promoter family protein [Prevotella oralis
           ATCC 33269]
          Length = 504

 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 54/101 (53%), Gaps = 1/101 (0%)

Query: 17  FETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQ 76
            E    +AE +Q+  L+ ++E     EY +N  LN     E F   VP+ T+E+L+  I 
Sbjct: 18  LERYNNEAEALQQSVLKHLIEREKDTEYGRNHLLNRVKSYEDFTRNVPVNTYEELKTDID 77

Query: 77  RIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
           R+  G+ + +  G  +   ++SSGTT  K KF+P + E ++
Sbjct: 78  RMRHGEHNVLCQGG-VKWYAKSSGTTNDKSKFIPVSHEGLQ 117


>gi|443705235|gb|ELU01890.1| hypothetical protein CAPTEDRAFT_100125 [Capitella teleta]
          Length = 294

 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 82/175 (46%), Gaps = 16/175 (9%)

Query: 228 FRTFELVWEELCDDIREGVLSSRITVP-SIRAAMSKILKPNPELADLIHKKCSGLSNWYG 286
           FR  E   + LCDD+  G LS    V   +R  +++ L+     A+ + ++    ++  G
Sbjct: 41  FRMIEDQGDALCDDLENGFLSENFKVDEEVREEVNRNLRVESHRANQVRRELRKGTD--G 98

Query: 287 LIPELFPNAKYLSGIMTGSMEHYLKKLR-HYAGDLPLMSADYGSSEGWIGAN----VNPS 341
           L   L+PN K +   +TG+ E   + L+  Y   + +    + S+E  IGA      +  
Sbjct: 99  LALRLWPNLKMVHIAITGAFEPSYRMLKSSYIKGVYVRRFIHVSTEAAIGAPQESIADSG 158

Query: 342 LPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVT 396
             P    FA   +  +FEFIP      E ++    PK   L +++VG+ YE+I+T
Sbjct: 159 EKPRGYVFA--HSSAFFEFIP------EDEMDSASPKTFFLDQLQVGQTYEVIIT 205


>gi|227537507|ref|ZP_03967556.1| auxin-regulated protein [Sphingobacterium spiritivorum ATCC 33300]
 gi|227242644|gb|EEI92659.1| auxin-regulated protein [Sphingobacterium spiritivorum ATCC 33300]
          Length = 504

 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 82/408 (20%), Positives = 165/408 (40%), Gaps = 80/408 (19%)

Query: 1   MLEKMETVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFK 60
           +L  + T  + + + + +   K    +Q E  + ++    + E+ +         PE FK
Sbjct: 3   LLNSLFTWFLKKRMHQIDLFIKYPHEVQEEWFQSLVSTAEATEWGKKYDYKSILTPEEFK 62

Query: 61  SCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTL 120
             VP+  ++ ++ Y+ R+I G+   IL    I   ++SSGTT  K KF+P ++E +E   
Sbjct: 63  ERVPIQDYDSIKGYVDRMIKGE-QNILWPSDIKWFAKSSGTTADKSKFIPVSEEALE--- 118

Query: 121 QIFRTSYAFRNREFPIGKGKALQFIYGSKQSKT-----KGGLNAGTATTNVYRSSTFKAE 175
                       E     GK +  IY   + +      K  +  G++  N + S ++  +
Sbjct: 119 ------------ECHYQGGKDMLSIYCHNRPENKLFTGKSVVLGGSSQINSFNSDSYYGD 166

Query: 176 MKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVW 235
           + ++  +      + F  +F ++    +     F E+I+ + +                 
Sbjct: 167 LSSILIR-----NLPFWAEFKRTPNTEVTLNPNFEEKIENIANI---------------- 205

Query: 236 EELCDDIREGVLSSRITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNA 295
                 I+E V +S   VP+    M+K +            + +G SN    + E++PN 
Sbjct: 206 -----TIKENV-TSLAGVPTWNVVMAKRI-----------LEITGKSN----LLEVWPNL 244

Query: 296 KYLS--GIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGAN--VNPSLPPELATFAV 351
           ++ S  G+         KKL     +      +Y +SEG+       +      +  + V
Sbjct: 245 EFYSHGGVSFKPYREQFKKL--IPSENMYYLENYNASEGYFALQDRSDSDDLLLMLDYGV 302

Query: 352 LPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
                Y+EF+P  + NL  +     PK + L +V++G+ Y +I++  A
Sbjct: 303 -----YYEFLP--IENLHDE----HPKTLSLDQVEIGKNYALIISTNA 339


>gi|163789259|ref|ZP_02183701.1| auxin-regulated protein [Flavobacteriales bacterium ALC-1]
 gi|159875474|gb|EDP69536.1| auxin-regulated protein [Flavobacteriales bacterium ALC-1]
          Length = 500

 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 62/109 (56%), Gaps = 10/109 (9%)

Query: 57  ESFKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELM 116
           + FKS VP+  +E+L+PY++RI+ G+ + +  GKPI   +++SGTT G  K++P   E M
Sbjct: 60  QDFKSKVPIRDYEELKPYVERIVAGEENILWKGKPI-YFAKTSGTTSG-AKYIPITKESM 117

Query: 117 ETTLQIFRTS-----YAFRNREFPIGKGKALQFIYGSKQSKTKGGLNAG 160
            T ++  R +     +   N +F  GK   + F+ GS   + + G+  G
Sbjct: 118 PTHVEAARNAILMYIHETGNSKFVNGK---MIFLQGSPILEEQNGIKLG 163


>gi|441496945|ref|ZP_20979171.1| putative auxin-regulated protein [Fulvivirga imtechensis AK7]
 gi|441439418|gb|ELR72736.1| putative auxin-regulated protein [Fulvivirga imtechensis AK7]
          Length = 502

 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 68/138 (49%), Gaps = 6/138 (4%)

Query: 26  RIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISP 85
           R Q++    I++  AS  + ++ G     + + ++  VP+  +E+L PYI++I++G    
Sbjct: 28  RYQQQIFENIIKTAASTVFGKDHGFGDIRNYDDYRKQVPIKDYEELSPYIKQILEGKSDV 87

Query: 86  ILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRT---SYAFRNREFPIGKGKAL 142
           +  GKP    S++SGTT G  K++P     +   +   R    SY     +     GK L
Sbjct: 88  LWPGKP-EYFSKTSGTTSG-VKYIPITKASLPNHINSARNALLSYVHETGKSKFLDGK-L 144

Query: 143 QFIYGSKQSKTKGGLNAG 160
            F+ GS +   K G+N G
Sbjct: 145 IFLSGSPELDRKAGINTG 162


>gi|375013590|ref|YP_004990578.1| GH3 auxin-responsive promoter-binding protein [Owenweeksia
           hongkongensis DSM 17368]
 gi|359349514|gb|AEV33933.1| GH3 auxin-responsive promoter-binding protein [Owenweeksia
           hongkongensis DSM 17368]
          Length = 510

 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 76/169 (44%), Gaps = 21/169 (12%)

Query: 16  EFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYI 75
           + E   K    +Q+E L  +L+     E+ +       T  E FKS VPL  +E LQP +
Sbjct: 20  QIELFMKYPNEVQQEVLFTLLDTAKGTEWGKKYDFESITSYEEFKSRVPLHFYETLQPEV 79

Query: 76  QRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP 135
            R+  G+   I     I   ++SSGTT  K KF+P + E +E               +  
Sbjct: 80  DRMRAGE-QNITWPSEIRWFAKSSGTTDAKSKFIPVSQEAIE---------------DCH 123

Query: 136 IGKGKALQFIYGSKQSKTK--GGLN---AGTATTNVYRSSTFKAEMKAM 179
              GK L  IY +   +TK   G++    G++  N +++ +F  ++ A+
Sbjct: 124 FKGGKDLLSIYCNNNPETKIFSGMSLRLGGSSFINDHKNQSFYGDVSAI 172


>gi|375254631|ref|YP_005013798.1| GH3 auxin-responsive promoter [Tannerella forsythia ATCC 43037]
 gi|363407321|gb|AEW21007.1| GH3 auxin-responsive promoter [Tannerella forsythia ATCC 43037]
          Length = 514

 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 58/104 (55%), Gaps = 4/104 (3%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           IE F   T D   IQR+ LR +L +  +  + +       +  ++F+  +PL ++EDL P
Sbjct: 29  IESFGKRTVD---IQRQQLRYLLGKARNTTWGKRYAFAEISGYDTFRERIPLQSYEDLHP 85

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
           +I+R+I+G+   +L    +   ++SSGTT  + K++P   +++ 
Sbjct: 86  FIERMINGE-KDVLWPSTVRWYAQSSGTTNDRSKYIPVTSDILR 128


>gi|340617718|ref|YP_004736171.1| hypothetical protein zobellia_1730 [Zobellia galactanivorans]
 gi|339732515|emb|CAZ95783.1| Conserved hypothetical protein [Zobellia galactanivorans]
          Length = 498

 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 68/138 (49%), Gaps = 10/138 (7%)

Query: 28  QRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPIL 87
           Q    R+++++    ++  + G       E FK  VP+  +E L+PY+Q +++G  + + 
Sbjct: 30  QEAVFRELIQKAKRTKFGVDHGFEHIKSHEDFKKKVPIRDYEALKPYVQEVVEGKENILW 89

Query: 88  TGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSY-----AFRNREFPIGKGKAL 142
            GKPI   +++SGTT G  K++P  D  ++  +   R +         N +F  GK   +
Sbjct: 90  PGKPI-YFAKTSGTTSG-AKYIPITDTSIKHQVNASRNAILNYIDETGNADFVTGK---M 144

Query: 143 QFIYGSKQSKTKGGLNAG 160
            F+ GS +   K G+  G
Sbjct: 145 IFLQGSPELDEKNGIKLG 162


>gi|406951551|gb|EKD81456.1| GH3 auxin-responsive promoter, partial [uncultured bacterium]
          Length = 299

 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 26/92 (28%), Positives = 53/92 (57%), Gaps = 2/92 (2%)

Query: 27  IQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPI 86
           +Q   LR+ILE  + +++ +  GL   T  + F++ VP+  ++DLQP++QR+ +G    +
Sbjct: 37  VQANVLREILENASGSDFARQHGLTAITSVKDFQNSVPVNDYDDLQPFVQRVAEG-CPNV 95

Query: 87  LTGKPITTISRSSGTTQGKPKFLPFNDELMET 118
            + + +     +SGTT G  + +P+   L ++
Sbjct: 96  FSREKVLMFEETSGTTGGT-RLIPYTKGLQQS 126


>gi|409123205|ref|ZP_11222600.1| hypothetical protein GCBA3_06787, partial [Gillisia sp. CBA3202]
          Length = 264

 Score = 54.7 bits (130), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 82/176 (46%), Gaps = 6/176 (3%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           I + E   K    +Q+E LR ++      E  +    +   + ++F   VP+ ++E+ +P
Sbjct: 18  IHQMELFMKYPNEVQQELLRSLISTAKHTEIGKKYNFSEIINYQTFAERVPIHSYEEYEP 77

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME----TTLQIFRTSYAF 129
            I+R   G+ + I   +PI   ++SSGTT  K KF+P +++ +E       +     Y  
Sbjct: 78  SIERSRRGE-NNIFWPRPIKWFAKSSGTTNAKSKFIPVSEDSLEDCHYAAGKDLLCMYLN 136

Query: 130 RNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCS 185
            N +  +  GK+L+ + GSK+     G + G  +  +  +  F AE  +  S   S
Sbjct: 137 NNPQSQLFTGKSLR-LGGSKEIYRNNGTSYGDLSAILIENMPFWAEFSSTPSSEVS 191


>gi|329964463|ref|ZP_08301517.1| GH3 auxin-responsive promoter [Bacteroides fluxus YIT 12057]
 gi|328524863|gb|EGF51915.1| GH3 auxin-responsive promoter [Bacteroides fluxus YIT 12057]
          Length = 503

 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 87/397 (21%), Positives = 167/397 (42%), Gaps = 84/397 (21%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           ++E E  T  +  +Q+  L++++    + E+ +          E F+  +P+ T+E+++P
Sbjct: 16  LKEIEQYTDHSGELQQRVLQRLVRMAVNTEWGKKYDYASIRTYEDFRKRLPIQTYEEVKP 75

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDE-LMETTLQIFRTSYAFRNR 132
           Y+ R+  G+ + +L    I   ++SSGTT  K KFLP + E L +T  Q  + + A    
Sbjct: 76  YVTRLRAGEQN-LLWPSEIRWFAKSSGTTNDKSKFLPVSKESLHDTHYQGGKDAVAIY-- 132

Query: 133 EFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSP-DEVIF 191
              +G+    +F  G      KG +  G+   N+  + +   ++ A+  +  +P    + 
Sbjct: 133 ---LGQNPESRFFSG------KGLILGGSHAPNLNTNHSLVGDLSAILIENINPLVNFVR 183

Query: 192 GPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRI 251
            P    +L  H      F  +I+ +    A+  +HA                   +S+  
Sbjct: 184 VPGKRTALMEH------FEPKIEAI----ANETIHA------------------NVSNLS 215

Query: 252 TVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAK--YLSGI-MTGSMEH 308
            VPS    + K           I +K    S     + E++PN +  +  G+  T   E 
Sbjct: 216 GVPSWMLVLIK----------HILEKTGKQS-----LEEIWPNLEVFFHGGVAFTPYREQ 260

Query: 309 YLKKLR----HYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIG-YFEFIP- 362
           Y   +R    HY          Y +SEG+ G   +P  P  L    ++ + G ++EFIP 
Sbjct: 261 YKDVIRSSKMHYV-------ETYNASEGYFGTQNDPDDPAML----LMIDYGVFYEFIPL 309

Query: 363 QRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
           + +G    +  C+E       EV++ + Y ++++  A
Sbjct: 310 EDVGKTTPRAYCLE-------EVELDKNYAMVISTSA 339


>gi|302344809|ref|YP_003813162.1| GH3 auxin-responsive promoter [Prevotella melaninogenica ATCC
           25845]
 gi|302150161|gb|ADK96423.1| GH3 auxin-responsive promoter [Prevotella melaninogenica ATCC
           25845]
          Length = 494

 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 1/103 (0%)

Query: 16  EFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYI 75
           E E    D E IQRE ++ ++E     EY +    +     E F   +P+ T+E+L+  I
Sbjct: 9   ELERYVTDGEAIQREVMQYLVERAKDTEYGRKHLFSTIKSYEDFVQNIPVNTYEELKSDI 68

Query: 76  QRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMET 118
            R+  G+ + +  G+ +   ++SSGTT  K KF+P + E ++T
Sbjct: 69  DRMRHGERNILWPGQ-VRWYAKSSGTTNDKSKFIPVSHEGLQT 110


>gi|325954430|ref|YP_004238090.1| GH3 auxin-responsive promoter [Weeksella virosa DSM 16922]
 gi|323437048|gb|ADX67512.1| GH3 auxin-responsive promoter [Weeksella virosa DSM 16922]
          Length = 505

 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 1/74 (1%)

Query: 44  YLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQ 103
           Y +  G +   + E F+  VPLVT+ED +PYI+    G+      GK I   ++SSGTT 
Sbjct: 46  YGKEFGFDEIKNIEQFQQRVPLVTYEDFEPYIELARKGEKDVTWQGK-IRWFAKSSGTTN 104

Query: 104 GKPKFLPFNDELME 117
            K KF+P + E +E
Sbjct: 105 AKSKFIPISKESLE 118


>gi|288801791|ref|ZP_06407233.1| GH3 auxin-responsive promoter family protein [Prevotella
           melaninogenica D18]
 gi|288335833|gb|EFC74266.1| GH3 auxin-responsive promoter family protein [Prevotella
           melaninogenica D18]
          Length = 503

 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 1/103 (0%)

Query: 16  EFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYI 75
           E E    D E IQRE ++ ++E     EY +    +     E F   +P+ T+E+L+  I
Sbjct: 18  ELERYVTDGEAIQREVMQYLVERAKDTEYGRKHLFSTIKSYEDFVQNIPVNTYEELKSDI 77

Query: 76  QRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMET 118
            R+  G+ + +  G+ +   ++SSGTT  K KF+P + E ++T
Sbjct: 78  DRMRHGERNILWPGQ-VRWYAKSSGTTNDKSKFIPVSHEGLQT 119


>gi|374599833|ref|ZP_09672835.1| GH3 auxin-responsive promoter [Myroides odoratus DSM 2801]
 gi|423324994|ref|ZP_17302835.1| hypothetical protein HMPREF9716_02192 [Myroides odoratimimus CIP
           103059]
 gi|373911303|gb|EHQ43152.1| GH3 auxin-responsive promoter [Myroides odoratus DSM 2801]
 gi|404607003|gb|EKB06537.1| hypothetical protein HMPREF9716_02192 [Myroides odoratimimus CIP
           103059]
          Length = 503

 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 1/105 (0%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           I + +   K    +Q +    +++ N      +        + E+F   VP+ T+E+ +P
Sbjct: 18  IHQIDLFRKYPNEVQNDVFLGLIKANEKTLLGKQYDYASIKNYETFAERVPIYTYEEFEP 77

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMET 118
           YI+R   G+ + I   +PI   ++SSGTT  K KF+P ++E +E 
Sbjct: 78  YIERARRGE-NNIFWSEPIRWFAKSSGTTNAKSKFIPVSNEALEN 121


>gi|423133297|ref|ZP_17120944.1| hypothetical protein HMPREF9715_00719 [Myroides odoratimimus CIP
           101113]
 gi|371649353|gb|EHO14834.1| hypothetical protein HMPREF9715_00719 [Myroides odoratimimus CIP
           101113]
          Length = 507

 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 77/176 (43%), Gaps = 6/176 (3%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           I + +   K    +Q +    +++ N      +  G +       F   VPL  +E+ +P
Sbjct: 18  IHQIDLFRKYPNEVQNDLFLNLMKTNEKTILGKQFGYDSIKSYGDFAERVPLFKYEEFEP 77

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMET----TLQIFRTSYAF 129
           YI+R   G+ + I   +PI   ++SSGTT  K KF+P ++E +E       +     Y  
Sbjct: 78  YIERARQGE-NNIFWPEPIRWFAKSSGTTNAKSKFIPVSNEALENCHYKAAKDLLCLYLN 136

Query: 130 RNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCS 185
            N +  +  GK+L+ + GSKQ         G  +  +  +  F AE+ +  S   S
Sbjct: 137 NNEDSQLFTGKSLR-LGGSKQLYEDKNTFFGDLSAILIDNMPFWAELSSTPSNKTS 191


>gi|423328896|ref|ZP_17306703.1| hypothetical protein HMPREF9711_02277 [Myroides odoratimimus CCUG
           3837]
 gi|404604127|gb|EKB03767.1| hypothetical protein HMPREF9711_02277 [Myroides odoratimimus CCUG
           3837]
          Length = 507

 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 77/176 (43%), Gaps = 6/176 (3%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           I + +   K    +Q +    +++ N      +  G +       F   VPL  +E+ +P
Sbjct: 18  IHQIDLFRKYPNEVQNDLFLNLMKTNEKTILGKQFGYDSIKSYGDFAERVPLFKYEEFEP 77

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMET----TLQIFRTSYAF 129
           YI+R   G+ + I   +PI   ++SSGTT  K KF+P ++E +E       +     Y  
Sbjct: 78  YIERARQGE-NNIFWPEPIRWFAKSSGTTNAKSKFIPVSNEALENCHYKAAKDLLCLYLN 136

Query: 130 RNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCS 185
            N +  +  GK+L+ + GSKQ         G  +  +  +  F AE+ +  S   S
Sbjct: 137 NNEDSQLFTGKSLR-LGGSKQLYEDKNTFFGDLSAILIDNMPFWAELSSTPSNKTS 191


>gi|390953966|ref|YP_006417724.1| GH3 auxin-responsive promoter-binding protein [Aequorivita
           sublithincola DSM 14238]
 gi|390419952|gb|AFL80709.1| GH3 auxin-responsive promoter-binding protein [Aequorivita
           sublithincola DSM 14238]
          Length = 496

 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 69/136 (50%), Gaps = 6/136 (4%)

Query: 28  QRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPIL 87
           Q++  ++++ E  +  + ++      +  E+F   VP+  +E+L+PY+ R++ G+   + 
Sbjct: 30  QQKVFKQLISEAKNTVFGKDHDFENISSFENFAKQVPVRDYEELKPYVDRMVSGEKDILW 89

Query: 88  TGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTS---YAFRNREFPIGKGKALQF 144
            GKP+   +++SGTT G  KF+P   E M   ++  R +   Y           GK + F
Sbjct: 90  PGKPL-YFAKTSGTTSG-AKFIPLTKESMPYHIEAARNAILCYINETGNAAFVDGKMI-F 146

Query: 145 IYGSKQSKTKGGLNAG 160
           + GS + + K G+  G
Sbjct: 147 LQGSPEMQEKNGIKTG 162


>gi|373108695|ref|ZP_09522977.1| hypothetical protein HMPREF9712_00570 [Myroides odoratimimus CCUG
           10230]
 gi|423129634|ref|ZP_17117309.1| hypothetical protein HMPREF9714_00709 [Myroides odoratimimus CCUG
           12901]
 gi|371646812|gb|EHO12323.1| hypothetical protein HMPREF9712_00570 [Myroides odoratimimus CCUG
           10230]
 gi|371648294|gb|EHO13784.1| hypothetical protein HMPREF9714_00709 [Myroides odoratimimus CCUG
           12901]
          Length = 507

 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 77/176 (43%), Gaps = 6/176 (3%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           I + +   K    +Q +    +++ N      +  G +       F   VPL  +E+ +P
Sbjct: 18  IHQIDLFRKYPNEVQNDLFLNLMKTNEKTILGKQFGYDSIKSYGDFAERVPLFKYEEFEP 77

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMET----TLQIFRTSYAF 129
           YI+R   G+ + I   +PI   ++SSGTT  K KF+P ++E +E       +     Y  
Sbjct: 78  YIERARQGE-NNIFWPEPIRWFAKSSGTTNAKSKFIPVSNEALENCHYKAAKDLLCLYLN 136

Query: 130 RNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCS 185
            N +  +  GK+L+ + GSKQ         G  +  +  +  F AE+ +  S   S
Sbjct: 137 NNEDSQLFTGKSLR-LGGSKQLYEDKNTFFGDLSAILIDNMPFWAELSSTPSNKTS 191


>gi|319900440|ref|YP_004160168.1| GH3 auxin-responsive promoter [Bacteroides helcogenes P 36-108]
 gi|319415471|gb|ADV42582.1| GH3 auxin-responsive promoter [Bacteroides helcogenes P 36-108]
          Length = 503

 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 56/106 (52%), Gaps = 1/106 (0%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           ++E E     A ++Q+  L+ ++   A  E+ +          E FK+ +P+ T+E+++P
Sbjct: 16  LKEIEQYADHAGKLQQGVLQHLVGTAADTEWGKKYNYASIRTYEDFKNRLPIQTYEEIKP 75

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETT 119
           Y+ R+  G+   +L    I   ++SSGTT  K KFLP + E +  T
Sbjct: 76  YVTRLRAGE-QNLLWPSEIRWFAKSSGTTNDKSKFLPVSKESLHDT 120


>gi|326800316|ref|YP_004318135.1| GH3 auxin-responsive promoter [Sphingobacterium sp. 21]
 gi|326551080|gb|ADZ79465.1| GH3 auxin-responsive promoter [Sphingobacterium sp. 21]
          Length = 499

 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 59/109 (54%), Gaps = 10/109 (9%)

Query: 57  ESFKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELM 116
           E FK  VP+  +E L+PYI+R++ G+ + +  GKP+  ++++SGTT G  K++P   E M
Sbjct: 59  EDFKEQVPVRDYEGLRPYIERVVAGESAVLWPGKPL-YLAKTSGTTSGT-KYIPLTRESM 116

Query: 117 ETTLQIFRTS-----YAFRNREFPIGKGKALQFIYGSKQSKTKGGLNAG 160
              +   R +     +   N  F  GK   + F+ GS + K K G+  G
Sbjct: 117 PEHITAARNALLTYIHETGNTSFVDGK---MIFLQGSPELKEKNGIKIG 162


>gi|189465038|ref|ZP_03013823.1| hypothetical protein BACINT_01382 [Bacteroides intestinalis DSM
           17393]
 gi|189437312|gb|EDV06297.1| GH3 auxin-responsive promoter [Bacteroides intestinalis DSM 17393]
          Length = 503

 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/106 (26%), Positives = 57/106 (53%), Gaps = 1/106 (0%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           +++ +     AE +Q + L +++    + E+ +          E F++ +P+ T+E+++P
Sbjct: 16  LKKIDLYANRAEELQHQVLNRLVRMAENTEWGKKYDYKSIHTYEDFRNRLPIQTYEEVKP 75

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETT 119
           Y++R+  G+   +L    I   ++SSGTT  K KFLP + E +  T
Sbjct: 76  YVERLRAGE-QNLLWSSEIRWFAKSSGTTNDKSKFLPVSKESLNDT 120


>gi|392969284|ref|ZP_10334700.1| GH3 auxin-responsive promoter [Fibrisoma limi BUZ 3]
 gi|387843646|emb|CCH56754.1| GH3 auxin-responsive promoter [Fibrisoma limi BUZ 3]
          Length = 481

 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 65/135 (48%), Gaps = 4/135 (2%)

Query: 28  QRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPIL 87
           Q+   R++++      + Q+         E F++ VP+  +EDL+PYI++I+ G    + 
Sbjct: 8   QQRWFRRLVDGGRQTLFGQDHRFRDIQTVEEFRTAVPIRDYEDLKPYIEKILAGQSDVLW 67

Query: 88  TGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFPIGK--GKALQFI 145
            GKP T  +++SGTT G  K++P   + +   +   R +      E   G    K L F+
Sbjct: 68  KGKP-TYFAKTSGTTSGT-KYIPITSDSIPNHIDSARDALLNYVNETSNGAFLDKKLIFL 125

Query: 146 YGSKQSKTKGGLNAG 160
            GS +   K G+  G
Sbjct: 126 SGSPELDEKAGIKTG 140


>gi|347537040|ref|YP_004844465.1| hypothetical protein FBFL15_2208 [Flavobacterium branchiophilum
           FL-15]
 gi|345530198|emb|CCB70228.1| Protein of unknown function [Flavobacterium branchiophilum FL-15]
          Length = 502

 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 1/104 (0%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           I + E   K    +Q E L  +++ + + E+ +N          +F   VP+ ++EDL+P
Sbjct: 18  IHQIELFLKYPHEVQEELLMNLIKSSENTEFGKNYDFVNIKTYRAFAEKVPVSSYEDLEP 77

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
            I++   G    +    PI   ++SSGTT  K KF+P + E +E
Sbjct: 78  MIEKTRQGH-QNVFWETPIKWFAKSSGTTNAKSKFIPVSPEALE 120


>gi|383810785|ref|ZP_09966273.1| GH3 auxin-responsive promoter [Prevotella sp. oral taxon 306 str.
           F0472]
 gi|383356633|gb|EID34129.1| GH3 auxin-responsive promoter [Prevotella sp. oral taxon 306 str.
           F0472]
          Length = 503

 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 1/104 (0%)

Query: 15  EEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPY 74
           +E E  T D+E IQ+E +  ++E     EY +    +  T  + F   VP+ T+E+L+  
Sbjct: 17  KELERYTTDSEAIQQEVMEYLIERAKDTEYGRKHLFSTITSYDDFVHNVPVNTYEELKDD 76

Query: 75  IQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMET 118
           I R+  G+   IL    +   ++SSGTT  K KF+P   E ++T
Sbjct: 77  IDRMRHGE-RDILWPGVVRWYAKSSGTTNDKSKFIPVTHEGLQT 119


>gi|406661755|ref|ZP_11069868.1| GH3 auxin-responsive promoter [Cecembia lonarensis LW9]
 gi|405554393|gb|EKB49489.1| GH3 auxin-responsive promoter [Cecembia lonarensis LW9]
          Length = 505

 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/104 (25%), Positives = 57/104 (54%), Gaps = 1/104 (0%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           I + +   K+   +QR+T  +++      E+ +  G +     + F + VP+ ++E++Q 
Sbjct: 16  IGQIDNFKKNPIEVQRDTFEELIASARRTEFGKQHGFSSIKKYQDFAANVPVQSYEEMQS 75

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
           + +RI+ G+   +L    I   S+SSGTT  + K++P ++E +E
Sbjct: 76  FFERIMKGE-QNLLWPSEILWFSKSSGTTSSRSKYIPVSNEALE 118


>gi|345884855|ref|ZP_08836255.1| hypothetical protein HMPREF0666_02431 [Prevotella sp. C561]
 gi|345042354|gb|EGW46455.1| hypothetical protein HMPREF0666_02431 [Prevotella sp. C561]
          Length = 508

 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 56/104 (53%), Gaps = 1/104 (0%)

Query: 15  EEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPY 74
           +E E    D E IQRE ++ ++E     EY +    +     E F   +P+ T+E+L+  
Sbjct: 17  KELEHYLTDGEAIQREVMQYLVERAKDTEYGRKHLFSTIKSYEDFTQNIPVNTYEELKGD 76

Query: 75  IQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMET 118
           I R+  G+ + +  G+ +   ++SSGTT  K KF+P + E ++T
Sbjct: 77  IDRMRHGERNILWPGQ-VRWYAKSSGTTNDKSKFIPVSHEGLQT 119


>gi|409099074|ref|ZP_11219098.1| GH3 auxin-responsive promoter, partial [Pedobacter agri PB92]
          Length = 187

 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 58/107 (54%), Gaps = 6/107 (5%)

Query: 57  ESFKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELM 116
           + F+  VP+  +E L+PY+ R++ G+ + + TGKP+   +++SGTT G  K++P + E M
Sbjct: 59  DDFRKHVPIQDYEGLKPYVDRVVAGEANVLWTGKPL-YFAKTSGTTSG-VKYIPLSKESM 116

Query: 117 ETTLQIFRTS---YAFRNREFPIGKGKALQFIYGSKQSKTKGGLNAG 160
              ++  R +   Y     +     GK + F+ GS     K G+N G
Sbjct: 117 PEHIKAARNAILTYINETGKADFVNGKMI-FLQGSPVLSVKNGINVG 162


>gi|255536582|ref|YP_003096953.1| auxin-regulated protein [Flavobacteriaceae bacterium 3519-10]
 gi|255342778|gb|ACU08891.1| putative auxin-regulated protein [Flavobacteriaceae bacterium
           3519-10]
          Length = 507

 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 54/108 (50%), Gaps = 1/108 (0%)

Query: 10  VDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHE 69
           + + I++ E   +     Q   L   L    + +Y +  G +  +  E F+  VP+VT+E
Sbjct: 18  IRQRIDQIENFIRQPIETQHGVLFSQLYHAENTDYGKIHGFSSISTYEDFRRNVPVVTYE 77

Query: 70  DLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
           D +P+I++   G       G  I   ++SSGTT  K KF+P ++E +E
Sbjct: 78  DFEPFIEKARQGKADVFWPGY-IRKFAKSSGTTNAKSKFIPISEESLE 124


>gi|444356673|ref|ZP_21158292.1| GH3 auxin-responsive promoter [Burkholderia cenocepacia BC7]
 gi|443607116|gb|ELT74854.1| GH3 auxin-responsive promoter [Burkholderia cenocepacia BC7]
          Length = 555

 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 55/98 (56%), Gaps = 2/98 (2%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           ++ FET T+D +  Q++ LR ++  +  + + Q  G +  +  + ++S +P++ ++D  P
Sbjct: 27  LQRFETATRDPQGTQQDVLRDVISVSKGSLHWQECGYSSVSGVDDYRSTLPIMRYDDFVP 86

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPF 111
            I R I      +LT  P+    ++SGTT G PK +P+
Sbjct: 87  LIDREIRTK-GGVLTCSPVMRWLKTSGTT-GTPKRVPY 122


>gi|206561939|ref|YP_002232702.1| hypothetical protein BCAM0069 [Burkholderia cenocepacia J2315]
 gi|444373529|ref|ZP_21172885.1| GH3 auxin-responsive promoter [Burkholderia cenocepacia
           K56-2Valvano]
 gi|198037979|emb|CAR53925.1| conserved hypothetical protein [Burkholderia cenocepacia J2315]
 gi|443591501|gb|ELT60384.1| GH3 auxin-responsive promoter [Burkholderia cenocepacia
           K56-2Valvano]
          Length = 560

 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 55/98 (56%), Gaps = 2/98 (2%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           ++ FET T+D +  Q++ LR ++  +  + + Q  G +  +  + ++S +P++ ++D  P
Sbjct: 32  LQRFETATRDPQGTQQDVLRDVISVSKGSLHWQECGYSSVSGVDDYRSTLPIMRYDDFVP 91

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPF 111
            I R I      +LT  P+    ++SGTT G PK +P+
Sbjct: 92  LIDREIRTK-GGVLTCSPVMRWLKTSGTT-GTPKRVPY 127


>gi|392586745|gb|EIW76081.1| hypothetical protein CONPUDRAFT_85240 [Coniophora puteana
           RWD-64-598 SS2]
          Length = 730

 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 76/368 (20%), Positives = 148/368 (40%), Gaps = 50/368 (13%)

Query: 57  ESFKSCVPLVTHEDLQPYIQRIIDGDISP------ILTGKPITTISRSSGTTQGKPKFLP 110
           E+++  +PL T+   +P++ +++D +++       +  G P   ++ SS T+   PK+ P
Sbjct: 109 ENYRDHIPLTTYPAYEPFVSKLMDPEVTEDEVKDLLSPGLPFF-VACSSATSGKVPKYFP 167

Query: 111 FNDELMETTLQIFRTSYAFRNREFPIG-KGKALQFIYGSKQSKT-----KGGLNAGTATT 164
              + +    Q + +     N   P+  +G     +Y     +      +GG  A     
Sbjct: 168 ---KYIHPAGQAYES---VDNNANPMSDRGGKNLVVYSLTYRRLIEVTGEGGKVAKKIPV 221

Query: 165 NVYRSSTFKAEMK-----------AMQSQCCSPDEVIFGPDFHQSLYCH--LLCGLIFRE 211
            +  S + + + K               +  SP  V F  ++   L  H     G +  E
Sbjct: 222 TLMSSGSVRMQHKIPVEADEWAKTMTAPRATSPIAVSFIDNYRTYLLIHGFFALGDVMLE 281

Query: 212 EIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPSIRAAMSKILKPNPELA 271
            +  +F T     +   R  E  W+ L D +  G L +   +  +R  +   +   PE A
Sbjct: 282 NVNTLFGTV---FLDMIRYIEEEWDHLLDCLEHGKLPNFEGLEEVRKYLEPKVVAKPERA 338

Query: 272 DLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRHYAG-DLPLMSADYGSS 330
             + +     S   G    ++PN + + GI +G     + K+RHY G D+ + S  + +S
Sbjct: 339 AELRELGIDTST-PGWCVRVWPNLRVVVGICSGVFAAVIPKIRHYVGPDVSMRSLGFTAS 397

Query: 331 EGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLG-NLESQVLCIEPKPVGLTEVKVGE 389
           E ++G    P    +L  +        F+ I + L  + E Q   +    V   +++ G 
Sbjct: 398 ETYVGMVYKPE---DLNLYKT-----SFDDIIEYLDISAEEQATSL----VSCWDIQTGS 445

Query: 390 EYEIIVTN 397
           +YEI+VT 
Sbjct: 446 KYEIVVTT 453


>gi|409100637|ref|ZP_11220661.1| GH3 auxin-responsive promoter [Pedobacter agri PB92]
          Length = 507

 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/104 (26%), Positives = 54/104 (51%), Gaps = 1/104 (0%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           I + E   K    +Q+E    +++   + E+ +         P+ F+  VP+  ++ L+P
Sbjct: 16  IHQIELFMKYPHDVQQEWFHTLIDSAENTEWGKMYDYKSILTPQQFQERVPIQNYDTLKP 75

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
           Y++R++ G+   IL    I   ++SSGTT  + KF+P + E +E
Sbjct: 76  YVERMLAGE-QNILWPSDIKWFAKSSGTTSDRSKFIPVSQESLE 118


>gi|399927730|ref|ZP_10785088.1| hypothetical protein MinjM_11956 [Myroides injenensis M09-0166]
          Length = 503

 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 76/176 (43%), Gaps = 6/176 (3%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           I + +   K    +Q +    +++ N      +        + E+F   VPL  +E+ +P
Sbjct: 18  IHQIDLFRKYPNEVQNDLFFSLIKNNEKTLLGKEFDYGSIKNYETFAERVPLFRYEEFEP 77

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMET----TLQIFRTSYAF 129
           YI+R   G+ S I   +PI   ++SSGTT  K KF+P ++E +E       +     Y  
Sbjct: 78  YIERARLGE-SNIFWPEPIRWFAKSSGTTNAKSKFIPVSNEALENCHYKAAKDLLCLYLN 136

Query: 130 RNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCS 185
            N    +  GK+L+ + GSKQ         G  +  +  +  F AE  +  S   S
Sbjct: 137 NNENSQLFTGKSLR-LGGSKQLYENNNTFFGDLSAILIDNMPFWAEFSSTPSNKTS 191


>gi|150024506|ref|YP_001295332.1| hypothetical protein FP0403 [Flavobacterium psychrophilum JIP02/86]
 gi|149771047|emb|CAL42514.1| Protein of unknown function [Flavobacterium psychrophilum JIP02/86]
          Length = 502

 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 53/104 (50%), Gaps = 1/104 (0%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           I + E   K    +Q E L  ++  + +    +  G +      +F+  VP+ T+EDL+P
Sbjct: 18  IHQIELFLKYPNEVQEELLINLIRSSENTIIGKQYGFDSIKSYHTFQERVPVSTYEDLEP 77

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
            I+R   G+   +   +PI   ++SSGTT  K KF+P ++  +E
Sbjct: 78  LIERTRKGE-QQVFWQEPIKWFAKSSGTTNAKSKFIPVSNSALE 120


>gi|282877282|ref|ZP_06286114.1| GH3 auxin-responsive promoter [Prevotella buccalis ATCC 35310]
 gi|281300623|gb|EFA92960.1| GH3 auxin-responsive promoter [Prevotella buccalis ATCC 35310]
          Length = 510

 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 54/100 (54%), Gaps = 1/100 (1%)

Query: 15  EEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPY 74
           +E E   K A+  Q++ L+ +LE     EY +N         E F   VP+ T+E+L+  
Sbjct: 16  KEIERHAKQADLTQQQVLQHLLERAKDTEYGRNHLFGSTKTYEDFAKNVPVNTYEELKGD 75

Query: 75  IQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDE 114
           I R+  G+ + +  G+ +   ++SSGTT  K KF+P ++E
Sbjct: 76  IDRMRHGEENVLWPGQ-VKWYAKSSGTTNDKSKFIPVSNE 114


>gi|291460959|ref|ZP_06026098.2| auxin-responsive GH3-related protein [Fusobacterium periodonticum
           ATCC 33693]
 gi|291379790|gb|EFE87308.1| auxin-responsive GH3-related protein [Fusobacterium periodonticum
           ATCC 33693]
          Length = 490

 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 2/89 (2%)

Query: 27  IQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPI 86
           IQ   L++ILE N ++ Y +    N     E F+  VPL  +ED  PYI++I +G+   I
Sbjct: 9   IQENKLKEILENNKNSLYGKKYNFNEIKTIEDFQREVPLTKYEDYLPYIEKIKNGE-EHI 67

Query: 87  LTGKPITTISRSSGTTQGKPKFLPFNDEL 115
           LT + +     +SG+T    K +P+ D L
Sbjct: 68  LTYEKVKMFELTSGSTSA-SKLIPYTDSL 95


>gi|404367587|ref|ZP_10972950.1| hypothetical protein FUAG_01028 [Fusobacterium ulcerans ATCC 49185]
 gi|313688678|gb|EFS25513.1| hypothetical protein FUAG_01028 [Fusobacterium ulcerans ATCC 49185]
          Length = 508

 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 75/151 (49%), Gaps = 7/151 (4%)

Query: 15  EEFETIT--KDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQ 72
           +E+E  T  K+ + +Q E L++ILE+N    Y +    +    PE ++  VPL  +ED  
Sbjct: 16  KEYEKYTSCKNIKEVQEEKLKEILEKNKDTLYGKKYNFSEIKTPEEYREKVPLTNYEDYL 75

Query: 73  PYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDEL-METTLQIFRTSYAFRN 131
            YI+ I +G+   ILT + I  +  +SG+T    K +P+ + L  E    I    Y+  N
Sbjct: 76  EYIELIKNGE-KNILTKEEIILLEPTSGSTSS-SKLIPYTEGLKREFQAGIKPWIYSLYN 133

Query: 132 REFPIGKGKALQFI--YGSKQSKTKGGLNAG 160
               I KGK+   +    +++  T GG+  G
Sbjct: 134 NFPEIKKGKSYWSVTPMATEKKYTSGGIPIG 164


>gi|338210957|ref|YP_004655006.1| GH3 auxin-responsive promoter [Runella slithyformis DSM 19594]
 gi|336304772|gb|AEI47874.1| GH3 auxin-responsive promoter [Runella slithyformis DSM 19594]
          Length = 496

 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 56/108 (51%), Gaps = 8/108 (7%)

Query: 57  ESFKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELM 116
           + FK  VP+  +EDL+ YIQ+IIDG    +  GKPI   +++SGTT G  K++P + + +
Sbjct: 59  DDFKQAVPVRDYEDLKGYIQQIIDGQDDILWPGKPI-YFAKTSGTTSGT-KYIPISKDSI 116

Query: 117 ETTLQIFRTSYAFRNREFPIGKGKALQ----FIYGSKQSKTKGGLNAG 160
              +   R   A  N     GK + L     F+ GS    TKG +  G
Sbjct: 117 SNHINSARD--ALLNYIHETGKAQFLDNKLIFLSGSPVLDTKGSVPTG 162


>gi|375144155|ref|YP_005006596.1| GH3 auxin-responsive promoter [Niastella koreensis GR20-10]
 gi|361058201|gb|AEV97192.1| GH3 auxin-responsive promoter [Niastella koreensis GR20-10]
          Length = 498

 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 5/123 (4%)

Query: 28  QRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPIL 87
           Q E +R  ++E     + ++   N     E FK  VPL  +E L PYI+RI  G+   + 
Sbjct: 30  QDELMRSFVDEAKHTVFGKDHSFNEINTYEDFKQRVPLRNYEQLLPYIERIKSGEKDVLW 89

Query: 88  TGKPITTISRSSGTTQGKPKFLPFNDELMETTL---QIFRTSYAFRNREFPIGKGKALQF 144
            G+P     ++SGTT    K++P   + ++  +   Q    +Y+ +N +    KGK+L F
Sbjct: 90  KGRP-AFFGKTSGTTSNT-KYIPVTKDSLKNHIGGGQYAPLTYSHKNNKLAFLKGKSLFF 147

Query: 145 IYG 147
             G
Sbjct: 148 SDG 150


>gi|392592248|gb|EIW81575.1| hypothetical protein CONPUDRAFT_82446 [Coniophora puteana
           RWD-64-598 SS2]
          Length = 483

 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/205 (23%), Positives = 85/205 (41%), Gaps = 13/205 (6%)

Query: 194 DFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITV 253
           ++   L  H +  L   E +  +  T++ + V   R  +  W  L D I  GVL      
Sbjct: 119 NYRSMLLAHAVFALA-EESVDTLVMTWSTTFVDFVRWIDEEWGTLVDAISSGVLPQFPET 177

Query: 254 PSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKL 313
            S+   ++     N   AD + K         G   +++P  + L+ + TG+      ++
Sbjct: 178 GSVYVQIATTFTANQSRADALRKIGPPSQTAVGWALKVWPKLELLTAVCTGTFSRVYSEV 237

Query: 314 RHYAG-DLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQV 372
           R Y G D P+    YG +EG +G   + SL P++        I   E +P   GN +  +
Sbjct: 238 RGYIGPDTPVRCPIYGCTEGSVGLAYHDSL-PDIVKMLTDNYIEMLEVLP---GNEDGDI 293

Query: 373 LCIEPKPVGLTEVKVGEEYEIIVTN 397
                KP  L +V+  + YE ++T 
Sbjct: 294 -----KP--LWQVETDKTYEPVLTT 311


>gi|365959948|ref|YP_004941515.1| hypothetical protein FCOL_04455 [Flavobacterium columnare ATCC
           49512]
 gi|365736629|gb|AEW85722.1| hypothetical protein FCOL_04455 [Flavobacterium columnare ATCC
           49512]
          Length = 503

 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 77/176 (43%), Gaps = 6/176 (3%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           I + E   K    +Q E L  ++ ++ +    +           +F+  VP+  +EDL+P
Sbjct: 18  IHQIELFLKYPNEVQEELLMNLIRQSENTVLGKTYHFQSIKTYHTFQERVPISDYEDLEP 77

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTL----QIFRTSYAF 129
            I+R   G+   +   +PI   ++SSGTT  K KF+P ++E +E       +     Y  
Sbjct: 78  LIERTRKGE-QNVFWHQPIKWFAKSSGTTNAKSKFIPVSNEALENCHYKGSKDLLCMYLN 136

Query: 130 RNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCS 185
            N    +  GK+L+ + GSKQ         G  +  +  +  F AE+ +  S   S
Sbjct: 137 NNENSQLFTGKSLR-LGGSKQLYEDNNTFFGDLSAILIDNMPFWAELSSTPSNKTS 191


>gi|86134896|ref|ZP_01053478.1| GH3 auxin-responsive promoter [Polaribacter sp. MED152]
 gi|85821759|gb|EAQ42906.1| GH3 auxin-responsive promoter [Polaribacter sp. MED152]
          Length = 498

 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/140 (25%), Positives = 68/140 (48%), Gaps = 10/140 (7%)

Query: 26  RIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISP 85
           + Q +  + ++ +     + ++      +    FK  V ++ +E L+PY+ RI+ G+   
Sbjct: 28  KTQEKVFKNLIAKGQQTAFGKDHDFKNISTYTDFKKRVKVIDYEGLRPYVDRIVKGESDV 87

Query: 86  ILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAF-----RNREFPIGKGK 140
           + TGKP+   +++SGTT G  K++P   + M T ++  R +  F      +  F  GK  
Sbjct: 88  LWTGKPL-YFAKTSGTTSG-AKYIPITKDSMPTHIKAARNALLFYIAEKNDASFVNGK-- 143

Query: 141 ALQFIYGSKQSKTKGGLNAG 160
            + F+ GS   + K G+  G
Sbjct: 144 -MIFLQGSPVLQDKNGIKLG 162


>gi|395803485|ref|ZP_10482731.1| GH3 auxin-responsive promoter [Flavobacterium sp. F52]
 gi|395434297|gb|EJG00245.1| GH3 auxin-responsive promoter [Flavobacterium sp. F52]
          Length = 503

 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 1/104 (0%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           I + E   K    +Q E L  +L  + +    +    +     ++F   VP+ T+E+LQP
Sbjct: 18  IHQIELFLKYPNEVQEELLHNLLTASENTVIGKQYEFSSINSYQTFAERVPIATYEELQP 77

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
            I+R   G+   +    PI   ++SSGTT  K KF+P ++E +E
Sbjct: 78  LIERTRLGE-QNVFWESPIKWFAKSSGTTNAKSKFIPVSNEALE 120


>gi|423328258|ref|ZP_17306065.1| hypothetical protein HMPREF9711_01639 [Myroides odoratimimus CCUG
           3837]
 gi|404605161|gb|EKB04774.1| hypothetical protein HMPREF9711_01639 [Myroides odoratimimus CCUG
           3837]
          Length = 495

 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 67/141 (47%), Gaps = 6/141 (4%)

Query: 23  DAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGD 82
           D    Q++   ++LE+     + ++       + E F   VP+  +E L+PY+ R++ G+
Sbjct: 25  DPINTQKKVFEQLLEDAKHTAFGKDHNFAYINNYEDFVKHVPIRDYEGLRPYVDRVVAGE 84

Query: 83  ISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRT---SYAFRNREFPIGKG 139
              +  GKP+   +++SGTT G  K++P   E M   ++  R    +Y +   +     G
Sbjct: 85  SDVLWKGKPL-YFAKTSGTTSG-AKYIPLTKESMPYHIEAARNAILAYVYETGKADFVNG 142

Query: 140 KALQFIYGSKQSKTKGGLNAG 160
           K + F+ GS     K G+  G
Sbjct: 143 KMI-FLQGSPILDEKNGIKLG 162


>gi|424842897|ref|ZP_18267522.1| peptide arylation enzyme [Saprospira grandis DSM 2844]
 gi|395321095|gb|EJF54016.1| peptide arylation enzyme [Saprospira grandis DSM 2844]
          Length = 501

 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 89/391 (22%), Positives = 144/391 (36%), Gaps = 97/391 (24%)

Query: 28  QRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPIL 87
           Q +  R+++    +  Y ++   +   D  SFK  VPLV +E L+PY+ RI  G+ + + 
Sbjct: 30  QEKIRRELVAVGQTTAYGKDHQFDKIVDYASFKQQVPLVDYEALRPYVDRINAGEENVLW 89

Query: 88  TGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTS---YAFRNREFPIGKGKALQF 144
             +P    +++SGTT G  KF+P   E +       R S   Y  +  +     GK + F
Sbjct: 90  KARP-KYYAKTSGTTSGA-KFIPLTKESIPNHFGTARNSVFNYIAQTGKADFMDGKMI-F 146

Query: 145 IYGSKQSKTKGGLNAG--TATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQSLYCH 202
           + GS + + KG +  G  +  +N    S  K          C  D               
Sbjct: 147 LSGSPELEKKGDILLGRLSGISNHLVPSWLKGNQLPSYETNCIED--------------- 191

Query: 203 LLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITV-----PSIR 257
                                           WEE  D I E  + + + +     P ++
Sbjct: 192 --------------------------------WEEKLDRIVEETMDADMRLISGIPPWVQ 219

Query: 258 AAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTG--SMEHYLKKLRH 315
               ++L       +   KK          + E+FPN   LS  + G  + E Y +KL  
Sbjct: 220 MYYERLL-------ERTGKKT---------VLEVFPN---LSIFVYGGVNFEPYREKLES 260

Query: 316 YAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIG---YFEFIPQRLGNLESQV 372
             G        Y +SEG+I        P       +L NI    +FEF+P        Q 
Sbjct: 261 LVGGRIPSVETYPASEGFIAYQDQQDAP------GLLLNINSGIFFEFVPA------DQY 308

Query: 373 LCIEPKPVGLTEVKVGEEYEIIV-TNVAVAG 402
               P  + L EV++G  Y +++ TN  + G
Sbjct: 309 FSEHPPRLSLAEVELGVNYALVLNTNAGLWG 339


>gi|436833864|ref|YP_007319080.1| GH3 auxin-responsive promoter [Fibrella aestuarina BUZ 2]
 gi|384065277|emb|CCG98487.1| GH3 auxin-responsive promoter [Fibrella aestuarina BUZ 2]
          Length = 515

 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 54/100 (54%), Gaps = 1/100 (1%)

Query: 18  ETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQR 77
           E I       Q+    +++++    ++ +  G +       F+  VP+ ++EDL P+I+R
Sbjct: 20  EAIKARPSDAQQRVFGQLIQKGKRTQWGKAHGYSDIRSVADFQRQVPVSSYEDLFPFIER 79

Query: 78  IIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
           ++ G+ + +L   PI   S+SSGTT  + KF+P + E ++
Sbjct: 80  VMKGEQN-VLWSSPIRWFSKSSGTTNARSKFIPVSPEALD 118


>gi|284040485|ref|YP_003390415.1| GH3 auxin-responsive promoter [Spirosoma linguale DSM 74]
 gi|283819778|gb|ADB41616.1| GH3 auxin-responsive promoter [Spirosoma linguale DSM 74]
          Length = 507

 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/102 (24%), Positives = 55/102 (53%), Gaps = 1/102 (0%)

Query: 18  ETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQR 77
           E + ++   +Q++   +++      ++ +          + F+  VP+ ++EDL PYI+R
Sbjct: 20  EAMKQNPGVVQQKVFNQLIRAGRRTDWGKKHAYKSIRTIQDFQKQVPVSSYEDLFPYIER 79

Query: 78  IIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETT 119
           ++ G+ + +L   P+   S+SSGTT  + KF+P   E ++ +
Sbjct: 80  VLKGE-NKVLWPSPVRWFSKSSGTTNARSKFIPVTTESLDES 120


>gi|288928742|ref|ZP_06422588.1| GH3 auxin-responsive promoter family protein [Prevotella sp. oral
           taxon 317 str. F0108]
 gi|288329726|gb|EFC68311.1| GH3 auxin-responsive promoter family protein [Prevotella sp. oral
           taxon 317 str. F0108]
          Length = 501

 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 51/99 (51%), Gaps = 1/99 (1%)

Query: 16  EFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYI 75
           + ET    +E IQR  L  ++++    +Y    G+N     E F   +P+ ++E+L+  +
Sbjct: 17  DIETYAHHSEEIQRRVLTHLVQQGQRTQYGNTWGMNNIQTYEHFAKQLPVTSYEELKEPL 76

Query: 76  QRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDE 114
            R+  G+   +  G  +   ++SSGTT  K KF+P + E
Sbjct: 77  DRMRHGEADVLWPG-VVKWYAKSSGTTNDKSKFIPVSAE 114


>gi|365960763|ref|YP_004942330.1| hypothetical protein FCOL_08620 [Flavobacterium columnare ATCC
           49512]
 gi|365737444|gb|AEW86537.1| hypothetical protein FCOL_08620 [Flavobacterium columnare ATCC
           49512]
          Length = 493

 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 70/136 (51%), Gaps = 6/136 (4%)

Query: 28  QRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPIL 87
           Q++  +K++++  + ++ ++           +   VP+  +E+L+PY+ R++ G+ + + 
Sbjct: 30  QQKIFKKLIQQAKNTQFGKDHQFEQIHTYNDYVQKVPVRDYEELRPYVDRVVKGEENILW 89

Query: 88  TGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRT---SYAFRNREFPIGKGKALQF 144
           TGKPI   +++SGTT G  K++P   E M   ++  R    SY     +     GK + F
Sbjct: 90  TGKPI-YFAKTSGTTSG-AKYIPLTKESMPYHIEAARNAILSYVHETGKADFVNGKMI-F 146

Query: 145 IYGSKQSKTKGGLNAG 160
           + GS   + K G+  G
Sbjct: 147 LQGSPILEEKNGIKLG 162


>gi|303237996|ref|ZP_07324539.1| GH3 auxin-responsive promoter [Prevotella disiens FB035-09AN]
 gi|302481786|gb|EFL44838.1| GH3 auxin-responsive promoter [Prevotella disiens FB035-09AN]
          Length = 507

 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 54/99 (54%), Gaps = 1/99 (1%)

Query: 16  EFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYI 75
           E E  T +   IQR+ L+ ++E   + EY +N   +     ++F   +P+ T+E+L+  I
Sbjct: 18  ELERYTHEGVAIQRKVLKYLIERGTNTEYGRNHLFSTIKSYKNFAQNIPVNTYEELKADI 77

Query: 76  QRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDE 114
            R+  G+ + +  G+ +   ++SSGTT  K KF+P   E
Sbjct: 78  DRMRHGESNVLWPGQ-VKWYAKSSGTTNDKSKFIPITSE 115


>gi|312131719|ref|YP_003999059.1| gh3 auxiN-responsive promoter [Leadbetterella byssophila DSM 17132]
 gi|311908265|gb|ADQ18706.1| GH3 auxin-responsive promoter [Leadbetterella byssophila DSM 17132]
          Length = 506

 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 50/89 (56%), Gaps = 1/89 (1%)

Query: 28  QRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPIL 87
           Q      ++E     E+ Q+ G +     + F+  VP+VT+E+  P+++R++ G+ + I 
Sbjct: 30  QFNVFHNLIERARFTEFGQHYGFSDIKTIKDFQERVPVVTYEEFFPWMERVLKGEKN-IA 88

Query: 88  TGKPITTISRSSGTTQGKPKFLPFNDELM 116
               IT  S+SSGTT  + KF+P ++E +
Sbjct: 89  WPSEITWFSKSSGTTNARSKFIPVSEEAL 117


>gi|379729178|ref|YP_005321374.1| GH3 auxin-responsive promoter [Saprospira grandis str. Lewin]
 gi|378574789|gb|AFC23790.1| GH3 auxin-responsive promoter [Saprospira grandis str. Lewin]
          Length = 501

 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 88/386 (22%), Positives = 146/386 (37%), Gaps = 87/386 (22%)

Query: 28  QRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPIL 87
           Q +  ++++    +  Y ++   +   D  SFK  VPLV +E L+PY++RI  G+ + + 
Sbjct: 30  QEKIRQELVAVGQTTAYGKDHQFDKIVDYASFKQQVPLVDYEALRPYVERINGGEENVLW 89

Query: 88  TGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTS---YAFRNREFPIGKGKALQF 144
            G+P    +++SGTT G  KF+P   E +       R S   Y  +  +     GK + F
Sbjct: 90  KGRP-KYYAKTSGTTSGA-KFIPLTKESIPNHFGTARNSVFNYIAQTGKADFMDGKMI-F 146

Query: 145 IYGSKQSKTKGGLNAG--TATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQSLYCH 202
           + GS   + KG +  G  +  +N    S  K          C  D               
Sbjct: 147 LSGSPALEKKGDILLGRLSGISNHLVPSWLKGNQLPSYETNCIED--------------- 191

Query: 203 LLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPSIRAAMSK 262
                                           WEE  D         RI   ++ A M +
Sbjct: 192 --------------------------------WEEKLD---------RIVDETMHADM-R 209

Query: 263 ILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTG--SMEHYLKKLRHYAGDL 320
           ++   P    + +++    +    ++ E+FPN   LS  + G  + E Y +KL    G  
Sbjct: 210 LISGIPPWVQMYYERLLERTGKKTVL-EVFPN---LSIFVYGGVNFEPYREKLESLVGGR 265

Query: 321 PLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIG---YFEFIPQRLGNLESQVLCIEP 377
                 Y +SEG+I        P       +L NI    +FEF+P        Q     P
Sbjct: 266 IPSVETYPASEGFIAYQDQQDAP------GLLLNINSGIFFEFVPA------DQYFSENP 313

Query: 378 KPVGLTEVKVGEEYEIIV-TNVAVAG 402
             + L EV++G  Y +++ TN  + G
Sbjct: 314 PRLSLAEVELGVNYALVLNTNAGLWG 339


>gi|443710192|gb|ELU04490.1| hypothetical protein CAPTEDRAFT_73334, partial [Capitella teleta]
          Length = 428

 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 17/218 (7%)

Query: 186 PDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREG 245
           P   I   D    +Y   L  L   EEI+ +    A      F+  E   EELC D+  G
Sbjct: 45  PQAAIEVTDHQIQVYIIALFALA-EEEIEYMDCILAPMCYTLFKAIEDRGEELCRDLENG 103

Query: 246 VLSSRITVPS-IRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTG 304
            LS  I V   IR+ +++ L+     A  + ++    S   GL   L+P+ K ++   TG
Sbjct: 104 SLSLAIEVDDKIRSEVNRNLRVESSRASRVRRELQKGSE--GLALRLWPHLKIVTMTTTG 161

Query: 305 SMEHYLKKLR-HYAGDLPLMSADYGSSEGWIGANVNPSLPPE----LATFAVLPNIGYFE 359
           + E   + L+  +   +   +  + +SE  IG  V+P    +    + ++    +  +FE
Sbjct: 162 AFEAQSRMLKSSFIKGVFCKAFGHVASEAPIG--VSPECHQDSLEKVQSYTFAHSNAFFE 219

Query: 360 FIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN 397
           FIP      E ++    P    L ++++G+ YEI++TN
Sbjct: 220 FIP------EDEIHSQSPNTFFLDQLQLGQSYEILITN 251


>gi|329119538|ref|ZP_08248223.1| GH3 auxin-responsive promoter [Neisseria bacilliformis ATCC
           BAA-1200]
 gi|327464471|gb|EGF10771.1| GH3 auxin-responsive promoter [Neisseria bacilliformis ATCC
           BAA-1200]
          Length = 530

 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 66/154 (42%), Gaps = 5/154 (3%)

Query: 17  FETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQ 76
           F+T   D +R QR  L  IL  N    Y +  G    +  E F   VP+  +EDL+P I+
Sbjct: 27  FQTALADPQRAQRRILADILAANCGTLYGRRHGFARISCYEDFARAVPVAAYEDLRPLIE 86

Query: 77  RIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFPI 136
           R   G    +LT + +     + G+T G  K +P+ + L     +      A   R  P 
Sbjct: 87  RTAAGGRG-LLTAEAVVCFEETGGSTGGA-KPVPYTESLYVAFRRAVLPWLADLRRRRPQ 144

Query: 137 GKGKALQFIY---GSKQSKTKGGLNAGTATTNVY 167
                L FI      +++ T+GG+  G+ +   Y
Sbjct: 145 AFVGRLFFIVSPAARERTHTEGGIPLGSGSDLDY 178


>gi|338210140|ref|YP_004654187.1| GH3 auxin-responsive promoter [Runella slithyformis DSM 19594]
 gi|336303953|gb|AEI47055.1| GH3 auxin-responsive promoter [Runella slithyformis DSM 19594]
          Length = 498

 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 11/108 (10%)

Query: 20  ITKDAERIQR------ETLRKILEENASAEYLQNLGLNGRTDP----ESFKSCVPLVTHE 69
           + + AERI+       E   ++  E   A    + G+  R D       ++  VP+ T+E
Sbjct: 1   MKRRAERIEHFKAHPIEVQHQVFHELIEAARYTDWGIRYRYDSIQNIRQYRERVPISTYE 60

Query: 70  DLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
           D  PYI+R++ G+ + +L    +   S+SSGTT  + K+LP   E +E
Sbjct: 61  DFYPYIERVLAGEQN-VLWPSDVEWFSKSSGTTNSRSKYLPITPESLE 107


>gi|260591954|ref|ZP_05857412.1| GH3 auxin-responsive promoter family protein [Prevotella veroralis
           F0319]
 gi|260536238|gb|EEX18855.1| GH3 auxin-responsive promoter family protein [Prevotella veroralis
           F0319]
          Length = 503

 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 1/104 (0%)

Query: 15  EEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPY 74
           +E +  T D E IQ+E +  ++E     EY +    +  T  + F   VP+ T+E+L+  
Sbjct: 17  KELDRYTTDGEAIQQEVMEYLIERAKDTEYGRKHLFSTITSYDDFVHNVPVNTYEELKDD 76

Query: 75  IQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMET 118
           I R+  G+   IL    +   ++SSGTT  K KF+P   E ++T
Sbjct: 77  IDRMRHGE-RDILWPGVVRWYAKSSGTTNDKSKFIPITHEGLQT 119


>gi|419970911|ref|ZP_14486381.1| GH3 auxin-responsive promoter [Porphyromonas gingivalis W50]
 gi|392609632|gb|EIW92436.1| GH3 auxin-responsive promoter [Porphyromonas gingivalis W50]
          Length = 503

 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 1/97 (1%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           ++  +T    AE IQ   LR+IL   A        G N  +  E F   VP+  +E  Q 
Sbjct: 16  LKTIDTYASRAEEIQDRQLRRILSSAAYTSTGIRYGFNRISSKECFARNVPVRDYESTQA 75

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLP 110
            I+R++ G+   +  G+  T  ++SSGTT  K KF+P
Sbjct: 76  EIERMLRGEKDVLCPGR-CTWFAKSSGTTNSKSKFIP 111


>gi|256419915|ref|YP_003120568.1| GH3 auxin-responsive promoter [Chitinophaga pinensis DSM 2588]
 gi|256034823|gb|ACU58367.1| GH3 auxin-responsive promoter [Chitinophaga pinensis DSM 2588]
          Length = 510

 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 1/75 (1%)

Query: 43  EYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTT 102
           E+ +  G +     E FK  VP+  ++ L+PYIQR+++G    IL   PI   ++SSGTT
Sbjct: 45  EFGKQYGFSQIYKIEEFKQRVPIHNYDTLKPYIQRLMEGQ-QNILWNTPIKWFAKSSGTT 103

Query: 103 QGKPKFLPFNDELME 117
             K KF+P + E ++
Sbjct: 104 ADKSKFIPVSVESLD 118


>gi|34541349|ref|NP_905828.1| hypothetical protein PG1720 [Porphyromonas gingivalis W83]
 gi|34397665|gb|AAQ66727.1| conserved domain protein [Porphyromonas gingivalis W83]
          Length = 509

 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 1/97 (1%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           ++  +T    AE IQ   LR+IL   A        G N  +  E F   VP+  +E  Q 
Sbjct: 22  LKTIDTYASRAEEIQDRQLRRILSSAAYTSTGIRYGFNRISSKECFARNVPVRDYESTQA 81

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLP 110
            I+R++ G+   +  G+  T  ++SSGTT  K KF+P
Sbjct: 82  EIERMLRGEKDVLCPGR-CTWFAKSSGTTNSKSKFIP 117


>gi|222631807|gb|EEE63939.1| hypothetical protein OsJ_18764 [Oryza sativa Japonica Group]
          Length = 62

 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/44 (54%), Positives = 33/44 (75%)

Query: 50 LNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPIT 93
          + GRTD E FK+ VP+VT+EDL+P I+R  +GD S I++  PIT
Sbjct: 1  MEGRTDREVFKARVPIVTYEDLRPEIERTANGDRSNIISSHPIT 44


>gi|373109345|ref|ZP_09523624.1| hypothetical protein HMPREF9712_01217 [Myroides odoratimimus CCUG
           10230]
 gi|423132644|ref|ZP_17120291.1| hypothetical protein HMPREF9715_00066 [Myroides odoratimimus CIP
           101113]
 gi|371645343|gb|EHO10869.1| hypothetical protein HMPREF9712_01217 [Myroides odoratimimus CCUG
           10230]
 gi|371650021|gb|EHO15495.1| hypothetical protein HMPREF9715_00066 [Myroides odoratimimus CIP
           101113]
          Length = 495

 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 66/141 (46%), Gaps = 6/141 (4%)

Query: 23  DAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGD 82
           D    Q++   ++LE+     + ++         E F   VP+  +E L+PY+ R++ G+
Sbjct: 25  DPINTQKKVFEQLLEDAKHTAFGKDHNFAYINSYEDFVKHVPIRDYEGLRPYVDRVVAGE 84

Query: 83  ISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRT---SYAFRNREFPIGKG 139
              +  GKP+   +++SGTT G  K++P   E M   ++  R    +Y +   +     G
Sbjct: 85  SDVLWKGKPL-YFAKTSGTTSG-AKYIPLTKESMPYHIEAARNAILAYVYETGKADFVNG 142

Query: 140 KALQFIYGSKQSKTKGGLNAG 160
           K + F+ GS     K G+  G
Sbjct: 143 KMI-FLQGSPILDEKNGIKLG 162


>gi|424072201|ref|ZP_17809622.1| putative auxin-responsive-like protein [Pseudomonas syringae pv.
           avellanae str. ISPaVe037]
 gi|407997855|gb|EKG38284.1| putative auxin-responsive-like protein [Pseudomonas syringae pv.
           avellanae str. ISPaVe037]
          Length = 538

 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 78/189 (41%), Gaps = 30/189 (15%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           ++ ++ + +  E  Q+  L ++L  +    + Q     G  D E F+  VP+ T+  LQP
Sbjct: 23  LDHWQRLFEQPEESQQRLLLRMLSASRDCAFGQAHDFAGIRDSEEFRKRVPIHTYAQLQP 82

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDE------------LMETTLQ 121
           +I+R    +  PILT  P     RSSG +  + K +P+  E            L +   Q
Sbjct: 83  WIER-AQHEQGPILTASPPLFFERSSGNSAVQ-KHIPYTQEFLGQLQGSLTVWLADMYRQ 140

Query: 122 IFRTSY--------------AFRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNV- 166
           +   S+              A    + PIG    LQ++ GS  +   G L     T++V 
Sbjct: 141 VPEISHGSGYWSMSPPLQQPAMTANDIPIGSASDLQYLQGSAIAGLAGTLLIPELTSDVA 200

Query: 167 -YRSSTFKA 174
            +R  T  A
Sbjct: 201 HWRRQTLLA 209


>gi|317504372|ref|ZP_07962356.1| GH3 auxin-responsive promoter family protein [Prevotella salivae
           DSM 15606]
 gi|315664494|gb|EFV04177.1| GH3 auxin-responsive promoter family protein [Prevotella salivae
           DSM 15606]
          Length = 521

 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 57/100 (57%), Gaps = 2/100 (2%)

Query: 15  EEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPY 74
           ++ E    +A ++Q++ L++++E     EY +  G+      E F   +P+V++E+L+  
Sbjct: 25  KDLERYATEAVKMQQKVLKRLIEHGRHTEYGRKFGMQS-CRYEDFAQGIPVVSYEELKGD 83

Query: 75  IQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDE 114
           I R+  G+ + +  G+ +   ++SSGTT  K KF+P + +
Sbjct: 84  IDRMRHGEANVLWPGR-VKWYAKSSGTTNDKSKFIPVSKD 122


>gi|281424783|ref|ZP_06255696.1| GH3 auxin-responsive promoter family protein [Prevotella oris
           F0302]
 gi|281401153|gb|EFB31984.1| GH3 auxin-responsive promoter family protein [Prevotella oris
           F0302]
          Length = 519

 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 57/100 (57%), Gaps = 2/100 (2%)

Query: 15  EEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPY 74
           ++ E    +  ++Q++ L++++E  +  EY +  G+   +  E F   +P+VT+E+L+  
Sbjct: 34  KDLERYATEGVKMQQKVLKRLVEHGSQTEYGRKFGVQS-SHYEDFAHRLPVVTYEELKGD 92

Query: 75  IQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDE 114
           I R+  G+   +  G+ +   ++SSGTT  K KF+P + +
Sbjct: 93  IDRMRHGEADVLWPGR-VKWYAKSSGTTNDKSKFIPVSKD 131


>gi|402847306|ref|ZP_10895601.1| GH3 auxin-responsive promoter [Porphyromonas sp. oral taxon 279
           str. F0450]
 gi|402266619|gb|EJU16040.1| GH3 auxin-responsive promoter [Porphyromonas sp. oral taxon 279
           str. F0450]
          Length = 515

 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 4/97 (4%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           IE++ T    AE +Q E LR IL   A  ++ +  GL  +T   S+ + VP+V +E L+ 
Sbjct: 19  IEQYAT---RAEELQAEQLRHILARAARTDFGRRYGLTRKTTYSSYCTDVPIVDYEGLKD 75

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLP 110
            I+R+  G+   ++ G      ++SSGTT  + K++P
Sbjct: 76  DIERMTRGERDVLVPGS-CQWFAKSSGTTSDRSKYIP 111


>gi|299142049|ref|ZP_07035183.1| GH3 auxin-responsive promoter family protein [Prevotella oris C735]
 gi|298576511|gb|EFI48383.1| GH3 auxin-responsive promoter family protein [Prevotella oris C735]
          Length = 504

 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 57/100 (57%), Gaps = 2/100 (2%)

Query: 15  EEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPY 74
           ++ E    +  ++Q++ L++++E  +  EY +  G+   +  E F   +P+VT+E+L+  
Sbjct: 16  KDLERYATEGVKMQQKVLKRLVEHGSQTEYGRKFGVQS-SHYEDFAHRLPVVTYEELKGD 74

Query: 75  IQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDE 114
           I R+  G+   +  G+ +   ++SSGTT  K KF+P + +
Sbjct: 75  IDRMRHGEADVLWPGR-VKWYAKSSGTTNDKSKFIPVSKD 113


>gi|146299473|ref|YP_001194064.1| GH3 auxin-responsive promoter [Flavobacterium johnsoniae UW101]
 gi|146153891|gb|ABQ04745.1| GH3 auxin-responsive promoter [Flavobacterium johnsoniae UW101]
          Length = 507

 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 1/104 (0%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           I + E   K    +Q E L  +L  + +    +          ++F   VP+ ++E+LQP
Sbjct: 18  IHQIELFLKYPNEVQEELLHNLLLASENTVIGKKYDFESINSYQTFAERVPIASYEELQP 77

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
            I+R   G+   +    PI   ++SSGTT  K KF+P ++E +E
Sbjct: 78  LIERTRQGE-QGVFWESPIKWFAKSSGTTNAKSKFIPVSNEALE 120


>gi|325105081|ref|YP_004274735.1| GH3 auxin-responsive promoter [Pedobacter saltans DSM 12145]
 gi|324973929|gb|ADY52913.1| GH3 auxin-responsive promoter [Pedobacter saltans DSM 12145]
          Length = 504

 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/104 (25%), Positives = 51/104 (49%), Gaps = 1/104 (0%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           + + E   K  + +Q E   +++      E+ +          E ++  VP+  +E L+P
Sbjct: 16  MHQIELFMKYPDEVQEEWFHELIHSAVGTEWGKTYDYRSIESVEDYRERVPIQNYETLKP 75

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
           YI+R++ G+   IL    +   ++SSGTT  + KF+P   E +E
Sbjct: 76  YIERMLKGE-QNILWPSEVKWFAKSSGTTSDRSKFIPVTQESLE 118


>gi|387132548|ref|YP_006298520.1| GH3 auxin-responsive promoter [Prevotella intermedia 17]
 gi|386375396|gb|AFJ08197.1| GH3 auxin-responsive promoter [Prevotella intermedia 17]
          Length = 507

 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 1/103 (0%)

Query: 16  EFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYI 75
           + E      E IQRE L+ +++     EY +N   +     E F   +P+ T+E+L+  I
Sbjct: 18  DLERYINKGEAIQREILQYLVKRGKDTEYGRNHLFSTIKSYEDFAQNIPVNTYEELKDDI 77

Query: 76  QRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMET 118
            R+  G+   +  G+ +   ++SSGTT  K KF+P   E ++T
Sbjct: 78  DRMRHGEKDILWPGQ-VKWYAKSSGTTNDKSKFIPITHEGLQT 119


>gi|300774453|ref|ZP_07084316.1| GH3 auxin-responsive promoter family protein [Chryseobacterium
           gleum ATCC 35910]
 gi|300506268|gb|EFK37403.1| GH3 auxin-responsive promoter family protein [Chryseobacterium
           gleum ATCC 35910]
          Length = 504

 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 58/111 (52%), Gaps = 7/111 (6%)

Query: 10  VDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHE 69
           + + I++ +         Q+  L   L      EY +  G N  +  + FK+ VP+VT+E
Sbjct: 15  IRQRIDQIQNFMDHPIETQKGILFSQLFHAEDTEYGKLYGFNSISSYQDFKNKVPIVTYE 74

Query: 70  DLQPYIQRIIDG--DIS-PILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
           +++PYI++   G  D+S P L    I   ++SSGTT  + KF+P + E +E
Sbjct: 75  EMEPYIEKARQGHKDVSWPGL----IKHFAKSSGTTNARSKFIPISAESLE 121


>gi|408673070|ref|YP_006872818.1| GH3 auxin-responsive promoter [Emticicia oligotrophica DSM 17448]
 gi|387854694|gb|AFK02791.1| GH3 auxin-responsive promoter [Emticicia oligotrophica DSM 17448]
          Length = 506

 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 1/117 (0%)

Query: 1   MLEKMETVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFK 60
           ML  + +  +   I   E   ++    Q      ++E     E+      +     + F+
Sbjct: 1   MLNDILSFFLKRRITRIEEFLRNPIDTQNRVFHDLIENARYTEWGIKYDYSSIDSIKKFQ 60

Query: 61  SCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
             VP+ T+E+L PYI+R++ G+   +L    I   S+SSGTT  + KF+P ++E +E
Sbjct: 61  ERVPISTYEELYPYIERVLKGE-QNVLWASEIKWFSKSSGTTNSRSKFIPVSEESLE 116


>gi|343083793|ref|YP_004773088.1| GH3 auxin-responsive promoter [Cyclobacterium marinum DSM 745]
 gi|342352327|gb|AEL24857.1| GH3 auxin-responsive promoter [Cyclobacterium marinum DSM 745]
          Length = 505

 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 1/104 (0%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           I + E    +    QRE L K++      E+ +       +  E + + VP+  +E ++P
Sbjct: 16  IGQIEKFKNNPLETQREILFKLIHTAKHTEFGKKYNFGKISAYEDYNAWVPVHDYEAIKP 75

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
           YI++ + G    +L   PI   S+SSGTT  + KF+P + E +E
Sbjct: 76  YIEQTMKGQ-QNVLWPTPIHWFSKSSGTTSSRSKFIPVSPESLE 118


>gi|423128989|ref|ZP_17116664.1| hypothetical protein HMPREF9714_00064 [Myroides odoratimimus CCUG
           12901]
 gi|371649831|gb|EHO15307.1| hypothetical protein HMPREF9714_00064 [Myroides odoratimimus CCUG
           12901]
          Length = 495

 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 66/141 (46%), Gaps = 6/141 (4%)

Query: 23  DAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGD 82
           D    Q++   ++LE+     + ++         E F   VP+  +E L+PY+ R++ G+
Sbjct: 25  DPINTQKKVFEQLLEDAKHTAFGKDHNFAYIKSYEDFVQQVPIRDYEGLRPYVDRVVAGE 84

Query: 83  ISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRT---SYAFRNREFPIGKG 139
              +  GKP+   +++SGTT G  K++P   E M   ++  R    +Y +   +     G
Sbjct: 85  SDVLWKGKPL-YFAKTSGTTSG-AKYIPLTKESMPYHIEAARNAILAYVYETGKADFVNG 142

Query: 140 KALQFIYGSKQSKTKGGLNAG 160
           K + F+ GS     K G+  G
Sbjct: 143 KMI-FLQGSPILDEKNGIKLG 162


>gi|429755639|ref|ZP_19288276.1| GH3 auxin-responsive promoter [Capnocytophaga sp. oral taxon 324
           str. F0483]
 gi|429173389|gb|EKY14915.1| GH3 auxin-responsive promoter [Capnocytophaga sp. oral taxon 324
           str. F0483]
          Length = 495

 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 69/136 (50%), Gaps = 6/136 (4%)

Query: 28  QRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPIL 87
           Q++  + ++E+  +  + ++         E F + VP+  +E L+PYI R+++G+   + 
Sbjct: 29  QQKVFQSLIEQAKNTAFGRDHHFEEIQTYEDFVARVPIRDYEALRPYIDRVVEGEKDVLW 88

Query: 88  TGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTS---YAFRNREFPIGKGKALQF 144
            GKP+   +++SGTT G  K++P   + M   +Q  R +   Y    ++    +GK + F
Sbjct: 89  KGKPL-YFAKTSGTTSG-AKYIPITKDSMPFHIQAARDAILCYIHETKKADFVEGKMI-F 145

Query: 145 IYGSKQSKTKGGLNAG 160
           + GS     K G+  G
Sbjct: 146 LQGSPILGEKNGIKTG 161


>gi|262384657|ref|ZP_06077790.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
 gi|262293638|gb|EEY81573.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
          Length = 505

 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 1/96 (1%)

Query: 22  KDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDG 81
           +D + IQR+ L  +L      E+              F   +PL T+++++PY+ R+I+G
Sbjct: 24  QDIDHIQRKQLHALLSTARKTEWGLKYDYKSIRSYSDFCQRLPLQTYDEIKPYVTRMING 83

Query: 82  DISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
           + + IL    +   ++SSGTT  K KFLP   E+++
Sbjct: 84  ERN-ILWPSVVRWYAKSSGTTNDKSKFLPVTPEILK 118


>gi|444335403|ref|YP_007391772.1| putative auxin-regulated protein [Blattabacterium sp. (Blatta
           orientalis) str. Tarazona]
 gi|444299782|gb|AGD98019.1| putative auxin-regulated protein [Blattabacterium sp. (Blatta
           orientalis) str. Tarazona]
          Length = 501

 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 52/97 (53%), Gaps = 1/97 (1%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           I+  E+I ++   IQ + + +++    + E+ +  G       + F   +P+  + DLQP
Sbjct: 17  IKRIESIIRNPIEIQYKLIHQLIAYAKNTEFGKKYGFFDIKKYQQFSERIPICKYPDLQP 76

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLP 110
            I+RI  G+ + +  GK +   +RSSGTT  K K++P
Sbjct: 77  IIERIRKGEKNLLWPGK-VKWFARSSGTTSTKSKYIP 112


>gi|336172560|ref|YP_004579698.1| GH3 auxin-responsive promoter [Lacinutrix sp. 5H-3-7-4]
 gi|334727132|gb|AEH01270.1| GH3 auxin-responsive promoter [Lacinutrix sp. 5H-3-7-4]
          Length = 503

 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 73/163 (44%), Gaps = 6/163 (3%)

Query: 27  IQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPI 86
           +Q E L  ++E     E+ +  G +       F S VP+  +E+    I+R   G+ + I
Sbjct: 31  VQEELLLGLIETAKDTEFGKQHGFSSIKTYTDFSSRVPISNYEEYHELIERSRQGEHN-I 89

Query: 87  LTGKPITTISRSSGTTQGKPKFLPFNDELME----TTLQIFRTSYAFRNREFPIGKGKAL 142
              KPI   ++SSGTT GK KF+P + E +E       +     Y   N    +  GK+L
Sbjct: 90  FWPKPIKWFAKSSGTTSGKSKFIPVSSESLEDCHYAASKDLLCLYLNNNENSQLFTGKSL 149

Query: 143 QFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCS 185
           + + GSK+   + G   G  +  +  +  F AE  +  S   S
Sbjct: 150 R-LGGSKELYRENGTAFGDLSAILIDNMPFWAEYSSTPSNRVS 191


>gi|423334124|ref|ZP_17311905.1| hypothetical protein HMPREF1075_03556 [Parabacteroides distasonis
           CL03T12C09]
 gi|409225887|gb|EKN18801.1| hypothetical protein HMPREF1075_03556 [Parabacteroides distasonis
           CL03T12C09]
          Length = 505

 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 1/96 (1%)

Query: 22  KDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDG 81
           +D + IQR+ L  +L      E+              F   +PL T+++++PY+ R+I+G
Sbjct: 24  QDIDHIQRKQLHALLSTARKTEWGLKYDYKSIRSYSDFCQRLPLQTYDEIKPYVTRMING 83

Query: 82  DISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
           + + IL    +   ++SSGTT  K KFLP   E+++
Sbjct: 84  ERN-ILWPSVVRWYAKSSGTTNDKSKFLPVTPEILK 118


>gi|256842431|ref|ZP_05547934.1| conserved hypothetical protein [Parabacteroides sp. D13]
 gi|301312337|ref|ZP_07218254.1| GH3 auxin-responsive promoter family protein [Bacteroides sp. 20_3]
 gi|423337575|ref|ZP_17315319.1| hypothetical protein HMPREF1059_01244 [Parabacteroides distasonis
           CL09T03C24]
 gi|256736038|gb|EEU49369.1| conserved hypothetical protein [Parabacteroides sp. D13]
 gi|300829759|gb|EFK60412.1| GH3 auxin-responsive promoter family protein [Bacteroides sp. 20_3]
 gi|409236839|gb|EKN29643.1| hypothetical protein HMPREF1059_01244 [Parabacteroides distasonis
           CL09T03C24]
          Length = 505

 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 1/96 (1%)

Query: 22  KDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDG 81
           +D + IQR+ L  +L      E+              F   +PL T+++++PY+ R+I+G
Sbjct: 24  QDIDHIQRKQLHALLSTARKTEWGLKYDYKSIRSYSDFCQRLPLQTYDEIKPYVTRMING 83

Query: 82  DISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
           + + IL    +   ++SSGTT  K KFLP   E+++
Sbjct: 84  ERN-ILWPSVVRWYAKSSGTTNDKSKFLPVTPEILK 118


>gi|150009423|ref|YP_001304166.1| auxin-regulated protein [Parabacteroides distasonis ATCC 8503]
 gi|149937847|gb|ABR44544.1| putative auxin-regulated protein [Parabacteroides distasonis ATCC
           8503]
          Length = 505

 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 1/96 (1%)

Query: 22  KDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDG 81
           +D + IQR+ L  +L      E+              F   +PL T+++++PY+ R+I+G
Sbjct: 24  QDIDHIQRKQLHALLSTARKTEWGLKYDYKSIRSYSDFCQRLPLQTYDEIKPYVTRMING 83

Query: 82  DISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
           + + IL    +   ++SSGTT  K KFLP   E+++
Sbjct: 84  ERN-ILWPSVVRWYAKSSGTTNDKSKFLPVTPEILK 118


>gi|255016285|ref|ZP_05288411.1| putative auxin-regulated protein [Bacteroides sp. 2_1_7]
 gi|410105138|ref|ZP_11300047.1| hypothetical protein HMPREF0999_03819 [Parabacteroides sp. D25]
 gi|409232680|gb|EKN25523.1| hypothetical protein HMPREF0999_03819 [Parabacteroides sp. D25]
          Length = 505

 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 1/96 (1%)

Query: 22  KDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDG 81
           +D + IQR+ L  +L      E+              F   +PL T+++++PY+ R+I+G
Sbjct: 24  QDIDHIQRKQLHALLSTARKTEWGLKYDYKSIRSYSDFCQRLPLQTYDEIKPYVTRMING 83

Query: 82  DISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
           + + IL    +   ++SSGTT  K KFLP   E+++
Sbjct: 84  ERN-ILWPSVVRWYAKSSGTTNDKSKFLPVTPEILK 118


>gi|298377790|ref|ZP_06987740.1| GH3 auxin-responsive promoter family protein [Bacteroides sp.
           3_1_19]
 gi|298265236|gb|EFI06899.1| GH3 auxin-responsive promoter family protein [Bacteroides sp.
           3_1_19]
          Length = 505

 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 1/96 (1%)

Query: 22  KDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDG 81
           +D + IQR+ L  +L      E+              F   +PL T+++++PY+ R+I+G
Sbjct: 24  QDIDHIQRKQLHALLSTARKTEWGLKYDYKSIRSYSDFCQRLPLQTYDEIKPYVTRMING 83

Query: 82  DISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
           + + IL    +   ++SSGTT  K KFLP   E+++
Sbjct: 84  ERN-ILWPSVVRWYAKSSGTTNDKSKFLPVTPEILK 118


>gi|431796711|ref|YP_007223615.1| acyl-CoA synthetase [Echinicola vietnamensis DSM 17526]
 gi|430787476|gb|AGA77605.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Echinicola
           vietnamensis DSM 17526]
          Length = 506

 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/91 (27%), Positives = 51/91 (56%), Gaps = 1/91 (1%)

Query: 27  IQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPI 86
           +Q++    +++     ++ +  G      P+ F   VP+ ++E +QPYI++ + G+ + I
Sbjct: 29  VQQDIFFDLIKSAKKTQFGKKYGFADIKSPKDFDRQVPVHSYEQMQPYIEQTMRGEQNVI 88

Query: 87  LTGKPITTISRSSGTTQGKPKFLPFNDELME 117
              + I+  S+SSGTT  + KF+P + E +E
Sbjct: 89  WPSE-ISWFSKSSGTTSSRSKFIPVSQESLE 118


>gi|363581891|ref|ZP_09314701.1| hypothetical protein FbacHQ_10542 [Flavobacteriaceae bacterium
           HQM9]
          Length = 503

 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 78/176 (44%), Gaps = 6/176 (3%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           I + E   K    +Q E L  +L+   + E+ ++         + F   +P+ ++E+++P
Sbjct: 18  IHQMELFLKYPNEVQHELLFNLLKTAKNTEFGKHYAFETIKTYKEFTERIPIRSYEEVEP 77

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME----TTLQIFRTSYAF 129
           YI R   G+ S I     I   ++SSGTT  + KF+P + + +E       +     Y  
Sbjct: 78  YITRSRKGE-SNIFWPSEIKWFAKSSGTTNAQSKFIPVSAQSLEDCHYAASKDLLCVYLN 136

Query: 130 RNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCS 185
            N    + KGK L+ + GSK+   + G   G  +  +  +  F AE  +  S   S
Sbjct: 137 NNEGSELFKGKGLR-LGGSKKLYEQNGTFYGDLSAILIDNMPFWAEFSSTPSNQVS 191


>gi|399029172|ref|ZP_10730193.1| GH3 auxin-responsive promoter-binding protein [Flavobacterium sp.
           CF136]
 gi|398072961|gb|EJL64150.1| GH3 auxin-responsive promoter-binding protein [Flavobacterium sp.
           CF136]
          Length = 502

 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 1/104 (0%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           I + E   K    +Q E L  +L+   +    +          ++F   VP+ T+E+LQP
Sbjct: 18  IHQIELFLKYPNEVQEELLHNLLQAAENTIIGKQYEFASIKSYQTFTERVPISTYEELQP 77

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
            I+R   G+   ++   PI   ++SSGTT  K KF+P + E +E
Sbjct: 78  LIERTRQGE-QNVIWETPIKWFAKSSGTTNAKSKFIPVSTEALE 120


>gi|170095377|ref|XP_001878909.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164646213|gb|EDR10459.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 372

 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 45/186 (24%), Positives = 82/186 (44%), Gaps = 16/186 (8%)

Query: 215 LVF--STFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPSIRAAMSKILKPNPELAD 272
           LVF  +++      A    E  W+ + D +  G +     +   R  +   +KPNP  A 
Sbjct: 17  LVFMRASYTSIFYDAVLILEEHWDTVIDAVENGTIPDIYDLDYCRPYLEAQVKPNPHRAA 76

Query: 273 LIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRHYAG-DLPLMSADYGSSE 331
            +     G   W   + E++P  K +    +GS   +  K+RH+ G  + + S  YG++E
Sbjct: 77  ELRIIEKGKEGW---LREIWPLLKVVRASNSGSYAAFAAKVRHHVGPAVDIESYSYGATE 133

Query: 332 GWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEY 391
             +G   + +    L     L    YFEF+   +  +ES++   +       EV++G+ Y
Sbjct: 134 CMVGYGYDSANDHNLYR---LSGDSYFEFLD--VAEVESRMSLRQA-----WEVQIGQRY 183

Query: 392 EIIVTN 397
           E++VT 
Sbjct: 184 ELVVTT 189


>gi|374290187|ref|YP_005037240.1| hypothetical protein BLBCPU_101 [Blattabacterium sp. (Cryptocercus
           punctulatus) str. Cpu]
 gi|358376979|gb|AEU09167.1| hypothetical protein BLBCPU_101 [Blattabacterium sp. (Cryptocercus
           punctulatus) str. Cpu]
          Length = 501

 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/108 (26%), Positives = 54/108 (50%), Gaps = 1/108 (0%)

Query: 10  VDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHE 69
           + + I++ E+I +   +IQ   + K++      E+ +  G     + + F   +P+  + 
Sbjct: 13  IKKRIKKIESIIRSPIKIQHNLIHKMIFYAKKTEFGKKYGFQDIKEYQQFSERIPICNYI 72

Query: 70  DLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
           DL P I+RI  G+   +  GK +   +RSSGTT  K K++P  +  M 
Sbjct: 73  DLIPIIKRIRKGEKDILWPGK-VKWFARSSGTTNTKSKYIPVTNFSMH 119


>gi|344203231|ref|YP_004788374.1| GH3 auxin-responsive promoter [Muricauda ruestringensis DSM 13258]
 gi|343955153|gb|AEM70952.1| GH3 auxin-responsive promoter [Muricauda ruestringensis DSM 13258]
          Length = 504

 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 1/91 (1%)

Query: 27  IQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPI 86
           +Q E L ++L+ +      +  G       E F++ VP+VT+ED+ P I+R   G+   +
Sbjct: 31  VQDEVLHQLLDFSKDTMIGKQYGFQDLPKYEEFRNRVPIVTYEDVAPLIERTRRGE-QNL 89

Query: 87  LTGKPITTISRSSGTTQGKPKFLPFNDELME 117
                I   ++SSGTT  K KF+P + E +E
Sbjct: 90  FWPTSIKWFAKSSGTTNAKSKFIPVSTEALE 120


>gi|384097459|ref|ZP_09998580.1| hypothetical protein W5A_02350 [Imtechella halotolerans K1]
 gi|383837427|gb|EID76827.1| hypothetical protein W5A_02350 [Imtechella halotolerans K1]
          Length = 506

 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 68/135 (50%), Gaps = 10/135 (7%)

Query: 57  ESFKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELM 116
           E F+S VP+V +E+++P+I+R   G+   +    PI   ++SSGTT  K KF+P ++E +
Sbjct: 61  EQFRSKVPVVRYEEMEPFIERTRCGE-QNVFWPTPIRWFAKSSGTTNAKSKFIPVSEEAL 119

Query: 117 ETTLQIFRTS------YAFRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSS 170
           +     +++S      Y   N +  +  GK+L+ + GSKQ     G   G  +  +  + 
Sbjct: 120 QDCH--YKSSKDLLCLYLNNNEDSQLFTGKSLR-LGGSKQLYEDKGTYFGDLSAILIDNM 176

Query: 171 TFKAEMKAMQSQCCS 185
              AE  +  S   S
Sbjct: 177 PIWAEFSSTPSNKVS 191


>gi|383449723|ref|YP_005356444.1| hypothetical protein KQS_01975 [Flavobacterium indicum GPTSA100-9]
 gi|380501345|emb|CCG52387.1| Protein of unknown function [Flavobacterium indicum GPTSA100-9]
          Length = 502

 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 68/143 (47%), Gaps = 10/143 (6%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           I + E   K    +Q E L  +L++       +    +   +  +F   +P+ T+E+L+P
Sbjct: 18  IHQIELFLKYPHEVQEELLFNLLKQAEQTVVGKKYDFSSIKNYSTFNERIPIATYEELEP 77

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTS------Y 127
           +I++   G    +     I   ++SSGTT  K KF+P ++E +E     ++ S      Y
Sbjct: 78  FIEQTRQG-AQNVFWNSNIKYFAKSSGTTNAKSKFIPVSNEALENNH--YKASKDLLALY 134

Query: 128 AFRNREFPIGKGKALQFIYGSKQ 150
              N +  +  GK+L+ + GSKQ
Sbjct: 135 LHNNEDSQLFVGKSLR-LGGSKQ 156


>gi|408369446|ref|ZP_11167227.1| CF4-like protein [Galbibacter sp. ck-I2-15]
 gi|407745192|gb|EKF56758.1| CF4-like protein [Galbibacter sp. ck-I2-15]
          Length = 499

 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 41/164 (25%), Positives = 75/164 (45%), Gaps = 9/164 (5%)

Query: 28  QRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPIL 87
           Q +    +++      + ++ G +   + E FK  VP+  +E+L+PY+ RI+ G+ S + 
Sbjct: 30  QEKVFHSLVKSAKETAFGRDHGFDQIKNYEDFKQRVPIRDYEELKPYVDRIVQGEHSVLW 89

Query: 88  TGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTS---YAFRNREFPIGKGKALQF 144
            G P    +++SGTT G  K++P   E M   ++  R +   Y  +  +     GK + F
Sbjct: 90  PGLPY-YFAKTSGTTSG-AKYIPITKESMPFHIKAARDAILNYIHQTGKVDFVDGKMI-F 146

Query: 145 IYGSKQSKTKGGLNAGTATTNVYR---SSTFKAEMKAMQSQCCS 185
           + GS     K G+  G  +  V     S   K  M + ++ C  
Sbjct: 147 LQGSPILTEKNGIKLGRLSGIVAHYVPSYLQKNRMPSWETNCID 190


>gi|390942409|ref|YP_006406170.1| GH3 auxin-responsive promoter-binding protein [Belliella baltica
           DSM 15883]
 gi|390415837|gb|AFL83415.1| GH3 auxin-responsive promoter-binding protein [Belliella baltica
           DSM 15883]
          Length = 509

 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 50/91 (54%), Gaps = 1/91 (1%)

Query: 27  IQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPI 86
           +Q E L +++      E+ +    +   D + F + VP+  +E ++PYI+R ++G  + I
Sbjct: 29  VQEEILGELIHSAKRTEFGKKYNFSKIKDYKDFAAQVPIHDYEQMKPYIERTMEGHQNTI 88

Query: 87  LTGKPITTISRSSGTTQGKPKFLPFNDELME 117
              + I   S+SSGTT  + K++P + E +E
Sbjct: 89  WKSE-IEWFSKSSGTTASRSKYIPVSQESLE 118


>gi|325286838|ref|YP_004262628.1| GH3 auxin-responsive promoter [Cellulophaga lytica DSM 7489]
 gi|324322292|gb|ADY29757.1| GH3 auxin-responsive promoter [Cellulophaga lytica DSM 7489]
          Length = 504

 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 78/174 (44%), Gaps = 6/174 (3%)

Query: 16  EFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYI 75
           + E   K    +Q E + K+L      E  +       T+ + F   +P+V++E+++P+I
Sbjct: 20  QIELFLKYPAEVQEEVMFKLLSIAKDTEVGRQYNFASITNYKEFAERLPIVSYEEVEPFI 79

Query: 76  QRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME----TTLQIFRTSYAFRN 131
           +R   G+   I     I   ++SSGTT  K KF+P + E +E     + +     Y   N
Sbjct: 80  ERTRKGE-QNIFWPTSIKWFAKSSGTTNAKSKFIPVSSEALEDCHYKSGKDLLCLYLNNN 138

Query: 132 REFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCS 185
               +  GK+L+ + GSK+     G   G  +  +  +  F AE+ +  S   S
Sbjct: 139 ENSQLFTGKSLR-LGGSKELYEDNGSFFGDLSAILIDNMPFWAELSSTPSNKVS 191


>gi|282881239|ref|ZP_06289926.1| GH3 auxin-responsive promoter [Prevotella timonensis CRIS 5C-B1]
 gi|281305043|gb|EFA97116.1| GH3 auxin-responsive promoter [Prevotella timonensis CRIS 5C-B1]
          Length = 511

 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 55/102 (53%), Gaps = 1/102 (0%)

Query: 15  EEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPY 74
           +E E   +  E +Q++ L  +LE+    EY ++         E +   VP+ T+E+L+  
Sbjct: 16  KEIERCARHTESMQQQVLMNLLEQAKDTEYGRSHLFGSIKSYEEYVKNVPVCTYEELKSD 75

Query: 75  IQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELM 116
           I R+  G+ + +  G+ +   ++SSGTT  K KF+P ++E +
Sbjct: 76  IDRMRHGEENVLWPGQ-VKWFAKSSGTTNDKSKFIPVSNEAL 116


>gi|288799907|ref|ZP_06405366.1| GH3 auxin-responsive promoter family protein [Prevotella sp. oral
           taxon 299 str. F0039]
 gi|288333155|gb|EFC71634.1| GH3 auxin-responsive promoter family protein [Prevotella sp. oral
           taxon 299 str. F0039]
          Length = 508

 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 1/87 (1%)

Query: 24  AERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDI 83
           A  +Q   LR IL++  + EY +   L+     + F   VPL T+EDL+  I R+  G+ 
Sbjct: 25  AVALQHNVLRNILQQGQNTEYGRCHNLSTVNTYQQFAQSVPLNTYEDLKDDIDRMRQGE- 83

Query: 84  SPILTGKPITTISRSSGTTQGKPKFLP 110
             IL    +   ++SSGTT  K KF+P
Sbjct: 84  QDILWPGTVKWYAKSSGTTNDKSKFIP 110


>gi|381187316|ref|ZP_09894881.1| putative auxin-regulated protein [Flavobacterium frigoris PS1]
 gi|379650926|gb|EIA09496.1| putative auxin-regulated protein [Flavobacterium frigoris PS1]
          Length = 508

 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 1/104 (0%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           I + E   K    +Q E L  +++ + +    +           +F   VP+ T+E+LQP
Sbjct: 18  IHQIELFLKYPNEVQEELLMNLIQSSKNTVLGKEYDYATINSYATFADRVPISTYEELQP 77

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
            I+R   G+   +    PI   ++SSGTT  K KF+P ++E +E
Sbjct: 78  LIERTRKGE-QNVFWETPIKWFAKSSGTTNAKSKFIPVSNEALE 120


>gi|440719215|ref|ZP_20899644.1| auxin-responsive GH3-related protein [Pseudomonas syringae
           BRIP34876]
 gi|440725226|ref|ZP_20905498.1| auxin-responsive GH3-related protein [Pseudomonas syringae
           BRIP34881]
 gi|440368047|gb|ELQ05092.1| auxin-responsive GH3-related protein [Pseudomonas syringae
           BRIP34876]
 gi|440369211|gb|ELQ06205.1| auxin-responsive GH3-related protein [Pseudomonas syringae
           BRIP34881]
          Length = 538

 Score = 51.2 bits (121), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 70/170 (41%), Gaps = 28/170 (16%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           ++ ++ + +  E  Q+  L ++L  +    + Q     G  D E F+  VP+ T+  LQP
Sbjct: 23  LDHWQRLFEQPEESQQRLLLRMLSASRDCAFGQAHDFAGIRDSEEFRKRVPIHTYAQLQP 82

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDE------------LMETTLQ 121
           +I+R    +  PILT  P     RSSG +  + K +P+  E            L +   Q
Sbjct: 83  WIER-AQHEQGPILTASPPLFFERSSGNSAVQ-KHIPYTQEFLGQLQGSLTVWLADMYRQ 140

Query: 122 IFRTSY--------------AFRNREFPIGKGKALQFIYGSKQSKTKGGL 157
           +   S+              A    + PIG    LQ++ GS  +   G L
Sbjct: 141 VPEISHGSGYWSMSPPLQQPAMTANDIPIGSASDLQYLQGSAIAGLAGTL 190


>gi|429750125|ref|ZP_19283187.1| GH3 auxin-responsive promoter [Capnocytophaga sp. oral taxon 332
           str. F0381]
 gi|429165871|gb|EKY07896.1| GH3 auxin-responsive promoter [Capnocytophaga sp. oral taxon 332
           str. F0381]
          Length = 494

 Score = 51.2 bits (121), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 6/107 (5%)

Query: 57  ESFKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELM 116
           E F + VP+  +E L+PYI R+++G+ + +  GKP+   +++SGTT G  K++P   + M
Sbjct: 58  EDFVARVPIRDYEALRPYIDRVVEGEKNVLWRGKPL-YFAKTSGTTSG-AKYIPITKDSM 115

Query: 117 ETTLQIFRTS---YAFRNREFPIGKGKALQFIYGSKQSKTKGGLNAG 160
              +Q  R +   Y    ++     GK + F+ GS     K G+  G
Sbjct: 116 PHHIQNARNAILCYIHETKKADFVNGKMI-FLQGSPILSEKNGIKVG 161


>gi|357043370|ref|ZP_09105065.1| hypothetical protein HMPREF9138_01537 [Prevotella histicola F0411]
 gi|355368544|gb|EHG15961.1| hypothetical protein HMPREF9138_01537 [Prevotella histicola F0411]
          Length = 503

 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 54/104 (51%), Gaps = 1/104 (0%)

Query: 15  EEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPY 74
           +E E  T + E IQRE +  ++E     EY +    +     + F   VP+ T+E+L+  
Sbjct: 17  KELERYTTEGETIQREVMEYLIERAKDTEYGRKHLFSTIKSYDDFIQNVPVNTYEELKGD 76

Query: 75  IQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMET 118
           I R+  G+   +  G+ +   ++SSGTT  K KF+P + E ++ 
Sbjct: 77  IDRMRHGERDVLWPGQ-VRWYAKSSGTTNDKSKFIPVSHEGLQN 119


>gi|373498240|ref|ZP_09588755.1| hypothetical protein HMPREF0402_02628 [Fusobacterium sp. 12_1B]
 gi|371962280|gb|EHO79889.1| hypothetical protein HMPREF0402_02628 [Fusobacterium sp. 12_1B]
          Length = 508

 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 70/142 (49%), Gaps = 5/142 (3%)

Query: 22  KDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDG 81
           K+ + +Q E L++ILE+N +  Y +    +    PE ++  VPL  +ED   YI+ I +G
Sbjct: 25  KNIKEVQEEKLKEILEKNKNTLYGKKYNFSEIKTPEEYREKVPLTNYEDYLEYIELIKNG 84

Query: 82  DISPILTGKPITTISRSSGTTQGKPKFLPFNDEL-METTLQIFRTSYAFRNREFPIGKGK 140
           +   ILT + I  +  +SG+     K +P+ + L  E    I    Y+  N    I KGK
Sbjct: 85  E-RNILTKEEIILLEPTSGSMSS-SKLIPYTEGLKKEFQAGIKPWIYSLYNNFPEIKKGK 142

Query: 141 ALQFI--YGSKQSKTKGGLNAG 160
           +   +    +++  T GG+  G
Sbjct: 143 SYWSVTPMATEKKYTSGGIPIG 164


>gi|334146391|ref|YP_004509318.1| putative auxin-regulated protein [Porphyromonas gingivalis TDC60]
 gi|333803545|dbj|BAK24752.1| putative auxin-regulated protein [Porphyromonas gingivalis TDC60]
          Length = 503

 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 1/97 (1%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           ++  +T    AE IQ   LR+IL   A        G +  +  E F   VP+  +E  Q 
Sbjct: 16  LKTIDTYASRAEEIQDRQLRRILSSAAYTSTGIRYGFSRISSKECFARNVPVSDYESTQA 75

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLP 110
            I+R++ G+   +  G+  T  ++SSGTT  K KF+P
Sbjct: 76  EIERMLRGEKGVLCPGR-CTWFAKSSGTTNSKSKFIP 111


>gi|365877490|ref|ZP_09416994.1| gh3 auxin-responsive promoter [Elizabethkingia anophelis Ag1]
 gi|442587766|ref|ZP_21006581.1| auxin-regulated protein [Elizabethkingia anophelis R26]
 gi|365754923|gb|EHM96858.1| gh3 auxin-responsive promoter [Elizabethkingia anophelis Ag1]
 gi|442562620|gb|ELR79840.1| auxin-regulated protein [Elizabethkingia anophelis R26]
          Length = 505

 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 1/104 (0%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           I++ E         Q+  L   L      EY    G    +    F++ +P+V++ED +P
Sbjct: 19  IDQIERFIAHPYETQKGVLFSQLFLAEDTEYGLKYGFKSISSISDFQNRIPIVSYEDFEP 78

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
           YI++   G    I  G+ I   ++SSGTT  K KF+P  +E +E
Sbjct: 79  YIEKARQGVPDIIWPGQ-IKRFAKSSGTTNAKSKFIPITEESLE 121


>gi|379728956|ref|YP_005321152.1| GH3 auxin-responsive promoter [Saprospira grandis str. Lewin]
 gi|378574567|gb|AFC23568.1| GH3 auxin-responsive promoter [Saprospira grandis str. Lewin]
          Length = 503

 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 86/376 (22%), Positives = 161/376 (42%), Gaps = 67/376 (17%)

Query: 27  IQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPI 86
           +Q + L+ ++    +  + Q  G       + F+  +PL  +E L+PYI++++ G    +
Sbjct: 29  VQEQWLQHLISRAKNTHWGQEFGFQHIKTHKDFQKQLPLSDYETLKPYIRQMMLGQKDVL 88

Query: 87  LTGKPITTISRSSGTTQGKPKFLPFNDELMET-TLQIFRTSYAFRNREFPIGKGKALQFI 145
             G+     S+SSGTT  K K+LP + E ++T  LQ               G   AL   
Sbjct: 89  WPGQ-TKWFSKSSGTTNDKSKYLPVSMENLKTCHLQ---------------GSHDALALW 132

Query: 146 YGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQSLYCHLLC 205
           Y S Q +T+   NA +       S    AE    Q    S   ++  P + +  Y   + 
Sbjct: 133 YHS-QPQTQVMSNAKSLIMG--GSLERFAEFPESQIGDISAIMLLNMPFYGKYFYTPSME 189

Query: 206 GLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPSIRAAMSKILK 265
             + ++  Q +               EL+ +E+C   RE  L++   VP+    + + L 
Sbjct: 190 TALMKDWEQKI---------------ELMAQEIC---REN-LTTIGGVPTWTIVLFRKL- 229

Query: 266 PNPELADLIHKKCSGLSNWYGLIPELFPNAK-YLSGIMTGSMEHYLKKLRHYA-GDLPLM 323
                      + +G SN    I E+FPN + Y+ G +  S E Y ++ + +   +    
Sbjct: 230 ----------LEVTGKSN----ILEIFPNFEVYMHGGV--SFEPYRQQFKAFLPSEKVQY 273

Query: 324 SADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLT 383
             +Y +SEG+  +  +      L    +L N  Y+EF+P       S++   +P  + L 
Sbjct: 274 RENYNASEGYFASQYDGQNKDML---LLLDNGVYYEFMPL------SELGSAQPIVLSLA 324

Query: 384 EVKVGEEYEIIVTNVA 399
           EV++ ++Y +++++ A
Sbjct: 325 EVELDQDYALLISSNA 340


>gi|422668906|ref|ZP_16728758.1| auxin-responsive GH3-like protein [Pseudomonas syringae pv. aptata
           str. DSM 50252]
 gi|330981267|gb|EGH79370.1| auxin-responsive GH3-like protein [Pseudomonas syringae pv. aptata
           str. DSM 50252]
          Length = 538

 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 70/170 (41%), Gaps = 28/170 (16%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           ++ ++ + +  E  Q+  L ++L  +    + Q     G  D E F+  VP+ T+  LQP
Sbjct: 23  LDHWQRLFEQPEESQQRLLLRMLSASRDCAFGQAHDFAGIRDSEEFRKRVPIHTYAQLQP 82

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDE------------LMETTLQ 121
           +I+R    +  PILT  P     RSSG +  + K +P+  E            L +   Q
Sbjct: 83  WIER-AQHEQGPILTASPPLFFERSSGNSAVQ-KHIPYTQEFLGQLQGSLTVWLADMYRQ 140

Query: 122 IFRTSY--------------AFRNREFPIGKGKALQFIYGSKQSKTKGGL 157
           +   S+              A    + PIG    LQ++ GS  +   G L
Sbjct: 141 VPEISHGSGYWSMSPPLQQPAMTANDIPIGSASDLQYLQGSAIAGLAGTL 190


>gi|257487695|ref|ZP_05641736.1| auxin-responsive GH3-related protein [Pseudomonas syringae pv.
           tabaci str. ATCC 11528]
 gi|422679097|ref|ZP_16737371.1| auxin-responsive GH3-like protein [Pseudomonas syringae pv. tabaci
           str. ATCC 11528]
 gi|331008445|gb|EGH88501.1| auxin-responsive GH3-like protein [Pseudomonas syringae pv. tabaci
           str. ATCC 11528]
          Length = 533

 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 2/103 (1%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           ++ ++++ +  E+ Q+  L  +L  N    + Q     G  D E F+  VP+ T+  LQP
Sbjct: 23  LDHWQSLFEQPEQSQQRLLMLMLSANRDCAFGQAHDFAGIRDAEEFRKRVPIHTYAQLQP 82

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELM 116
           +I+R    +  PILT  P     RSSG +  + K +P+  E +
Sbjct: 83  WIER-AQQEQGPILTASPPLFFERSSGNSALQ-KHIPYTQEFL 123


>gi|429747554|ref|ZP_19280814.1| GH3 auxin-responsive promoter [Capnocytophaga sp. oral taxon 380
           str. F0488]
 gi|429162852|gb|EKY05130.1| GH3 auxin-responsive promoter [Capnocytophaga sp. oral taxon 380
           str. F0488]
          Length = 495

 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 69/136 (50%), Gaps = 6/136 (4%)

Query: 28  QRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPIL 87
           Q++  + ++E+  +  + ++         E F + VP+  +E L+PYI R+++G+   + 
Sbjct: 29  QQKVFQSLIEQAKNTAFGRDHHFEEIQTYEDFVARVPIRDYEVLRPYIDRVVEGEKDVLW 88

Query: 88  TGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTS---YAFRNREFPIGKGKALQF 144
            GKP+   +++SGTT G  K++P   + M   +Q  R +   Y    ++    +GK + F
Sbjct: 89  KGKPL-YFAKTSGTTSG-AKYIPITKDSMPFHIQAARDAILCYIHETKKADFVEGKMI-F 145

Query: 145 IYGSKQSKTKGGLNAG 160
           + GS     K G+  G
Sbjct: 146 LQGSPILGEKHGIKTG 161


>gi|402494035|ref|ZP_10840782.1| GH3 auxin-responsive promoter [Aquimarina agarilytica ZC1]
          Length = 505

 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 6/176 (3%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           I + E   K    +Q E L K+L+   + E+ +            F   VP+  +E+++P
Sbjct: 18  IHQMELFLKYPNEVQHELLFKLLKTAKNTEFGKAYEFETIKSYREFTQRVPIRNYEEVEP 77

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME----TTLQIFRTSYAF 129
           +I R   G+ S I     I   ++SSGTT  + KF+P + + +E       +     Y  
Sbjct: 78  FITRSRMGE-SNIFWPSEIKWFAKSSGTTNAQSKFIPVSSQSLEDCHYAASKDLLCVYLN 136

Query: 130 RNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCS 185
            N    + KGK L+ + GSKQ   + G   G  +  +  +  F AE  +  S   S
Sbjct: 137 NNEGSELFKGKGLR-LGGSKQLYEQNGTFYGDLSAILIDNMPFWAEFSSTPSNQVS 191


>gi|325108198|ref|YP_004269266.1| GH3 auxin-responsive promoter [Planctomyces brasiliensis DSM 5305]
 gi|324968466|gb|ADY59244.1| GH3 auxin-responsive promoter [Planctomyces brasiliensis DSM 5305]
          Length = 568

 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 86/391 (21%), Positives = 160/391 (40%), Gaps = 33/391 (8%)

Query: 17  FETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQ 76
           FE     A   Q++ L K + +    ++  + G +       F+  +P+  +    PYI 
Sbjct: 29  FEKTMNRAADQQQQWLLKRIRKCEETQFGIDHGFSNIHTVADFQRQIPVSDYTYFAPYID 88

Query: 77  RIIDGDISPILTG-KPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRN-REF 134
            +  G+   ++   + +   + ++G++ G PK  P  D  ++   Q +   +  +N  + 
Sbjct: 89  EVAAGNTQALVPATEKLLRFTITTGSS-GAPKLNPVTDTWLKEYKQAWGI-WGLKNFVDH 146

Query: 135 PIGKG-KALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGP 193
           P   G K LQ     +  KT GG +    +  + R      +   ++     P E+    
Sbjct: 147 PRHVGLKMLQMAGTWEMGKTTGGYSISMVSALLAR-----IQNPLLRPFYAIPSELNDVK 201

Query: 194 DFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITV 253
           D     Y  L   ++  E I  +      +L+      +   E+L  DI +G LS  + V
Sbjct: 202 DPVSRYYAALRLSIL--EPIGWIILMNPGTLIRLAEIGDENKEQLIRDIHDGGLSDHMDV 259

Query: 254 PS-IRAAMSKILK-PNPELADLIHKKCSGLSNWYG-LIPELFPNAKYLSGIMTGSMEHYL 310
           P  IR  ++K L   NP  A    +K   + N  G L+P  +     ++  + G+  +  
Sbjct: 260 PQEIRTKLAKRLSVANPAGA----RKLEEIVNRSGRLLPRDYWPNPVIACWLGGTAGYQS 315

Query: 311 KKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLES 370
           + +R Y GD PL      SSEG     +   +P  + +       G++E++P  +  +ES
Sbjct: 316 RYVRDYFGDSPLRDMGLVSSEGRHTIPIADDVPEGVPSLVS----GFYEYVP--VHEIES 369

Query: 371 QVLCIEPKPVGLT--EVKVGEEYEIIVTNVA 399
                 P P  L   E+  G+EY +++T  A
Sbjct: 370 ------PDPTVLQGHELLEGQEYYLLMTTSA 394


>gi|256819035|ref|YP_003140314.1| GH3 auxin-responsive promoter [Capnocytophaga ochracea DSM 7271]
 gi|256580618|gb|ACU91753.1| GH3 auxin-responsive promoter [Capnocytophaga ochracea DSM 7271]
          Length = 495

 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 68/136 (50%), Gaps = 6/136 (4%)

Query: 28  QRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPIL 87
           Q++    ++E+  +  + ++         E F + VP+  +E L+PYI R+++G+   + 
Sbjct: 29  QQKVFLSLIEQAKNTAFGRDHHFEEIQTYEDFVARVPIRDYEALRPYIDRVVEGEKDVLW 88

Query: 88  TGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTS---YAFRNREFPIGKGKALQF 144
            GKP+   +++SGTT G  K++P   + M   +Q  R +   Y    ++    +GK + F
Sbjct: 89  KGKPL-YFAKTSGTTSG-AKYIPITKDSMPFHIQAARDAILCYIHETKKADFVEGKMI-F 145

Query: 145 IYGSKQSKTKGGLNAG 160
           + GS     K G+  G
Sbjct: 146 LQGSPILGEKNGIKTG 161


>gi|429753667|ref|ZP_19286447.1| GH3 auxin-responsive promoter [Capnocytophaga sp. oral taxon 326
           str. F0382]
 gi|429172002|gb|EKY13586.1| GH3 auxin-responsive promoter [Capnocytophaga sp. oral taxon 326
           str. F0382]
          Length = 500

 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 70/136 (51%), Gaps = 6/136 (4%)

Query: 28  QRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPIL 87
           Q++  + ++E+  +  + ++         + F + VP+  +E L+PYI R+++G+ + + 
Sbjct: 29  QQKVFQSLIEQAKNTAFGRDHHFEEIKTYQDFVARVPIRDYEALRPYIDRVVEGEKNVLW 88

Query: 88  TGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTS---YAFRNREFPIGKGKALQF 144
            GKP+   +++SGTT G  K++P   + M   +Q  R +   Y    ++    +GK + F
Sbjct: 89  KGKPL-YFAKTSGTTSG-AKYIPITKDSMPFHIQAARDAILCYIHETKKADFVEGKMI-F 145

Query: 145 IYGSKQSKTKGGLNAG 160
           + GS     K G+  G
Sbjct: 146 LQGSPILGEKHGIKTG 161


>gi|373460659|ref|ZP_09552410.1| hypothetical protein HMPREF9944_00674 [Prevotella maculosa OT 289]
 gi|371955277|gb|EHO73081.1| hypothetical protein HMPREF9944_00674 [Prevotella maculosa OT 289]
          Length = 512

 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 54/97 (55%), Gaps = 4/97 (4%)

Query: 15  EEFETITKDAERIQRETLRKILEENASAEYLQNLGLN-GRTDPESFKSCVPLVTHEDLQP 73
           ++ E    ++  +Q++ LR+++E     EY +  G+  G  D   F   +PL T+E+L+ 
Sbjct: 16  KDLERYANESVSMQQKVLRRLVEHGRQTEYGRRFGMQTGNYD--DFARRIPLNTYEELKG 73

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLP 110
            I R+  G+ + +  G+ +   ++SSGTT  K KF+P
Sbjct: 74  DIDRMRHGEANVLWPGR-VRWFAKSSGTTNDKSKFIP 109


>gi|408491204|ref|YP_006867573.1| GH3 auxin-responsive promoter-like protein [Psychroflexus torquis
           ATCC 700755]
 gi|408468479|gb|AFU68823.1| GH3 auxin-responsive promoter-like protein [Psychroflexus torquis
           ATCC 700755]
          Length = 499

 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 66/136 (48%), Gaps = 6/136 (4%)

Query: 28  QRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPIL 87
           QR+  + +++E    ++ ++   +     E F   +P+  +E L+PYI +++DG    + 
Sbjct: 30  QRKVFKSLVKEGRKTKFGKDHRFDEIETFEDFFERIPIQDYEGLKPYIDQVVDGQEDILW 89

Query: 88  TGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRT---SYAFRNREFPIGKGKALQF 144
            GKP+   +++SGTT G  K++P   E + T     R    SY           GK + F
Sbjct: 90  PGKPL-YFAKTSGTTSG-AKYIPLTKESIPTHTSAARNAILSYIAETGNSSFVDGKMI-F 146

Query: 145 IYGSKQSKTKGGLNAG 160
           + GS + K K G+  G
Sbjct: 147 LQGSPELKEKNGIFFG 162


>gi|89889553|ref|ZP_01201064.1| conserved hypothetical protein [Flavobacteria bacterium BBFL7]
 gi|89517826|gb|EAS20482.1| conserved hypothetical protein [Flavobacteria bacterium BBFL7]
          Length = 508

 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/190 (24%), Positives = 80/190 (42%), Gaps = 11/190 (5%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           I + E   K  + +Q   L  ++      E  +  G         F   VPL  + D+Q 
Sbjct: 18  IHDMELFMKHPQELQNNLLMDMIRFARHTEVGKKYGFADMKSYRDFADRVPLGNYNDVQD 77

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME----TTLQIFRTSYAF 129
            I+R  +G+ + IL   PI   + SSGTT  + KF+P + E +E       +     Y  
Sbjct: 78  DIERCKNGE-NNILWPTPIKWFAMSSGTTSSRSKFIPVSQESLEDCHYAAAKDLLCMYLN 136

Query: 130 RNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEV 189
            N    + +GK L+ + GSK+     G +AG  ++ +  +  F A+  +        +E+
Sbjct: 137 NNPNSKLFRGKGLR-LGGSKKLDKIAGTSAGDLSSILIDNMPFWADYSS-----TPGNEI 190

Query: 190 IFGPDFHQSL 199
              PD+   +
Sbjct: 191 ALMPDWETKM 200


>gi|281421656|ref|ZP_06252655.1| GH3 auxin-responsive promoter family protein [Prevotella copri DSM
           18205]
 gi|281404290|gb|EFB34970.1| GH3 auxin-responsive promoter family protein [Prevotella copri DSM
           18205]
          Length = 502

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 1/96 (1%)

Query: 15  EEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPY 74
           +E E    DAE +Q + L  ++ +  + EY     LN     + F   +P+ T+E+L+  
Sbjct: 16  KELEKYVYDAEHLQHKVLMHLINKGKNTEYGVKHLLNTTNSYDKFAQNIPVNTYEELKGD 75

Query: 75  IQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLP 110
           I R+  G+   IL    +   ++SSGTT  K KF+P
Sbjct: 76  IDRMRHGE-KDILWPGLVKWYAKSSGTTNDKSKFIP 110


>gi|340622857|ref|YP_004741309.1| CF4-like protein [Capnocytophaga canimorsus Cc5]
 gi|339903123|gb|AEK24202.1| CF4-like protein [Capnocytophaga canimorsus Cc5]
          Length = 497

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 68/136 (50%), Gaps = 6/136 (4%)

Query: 28  QRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPIL 87
           Q +  +++++   + ++ ++           F   VP+  +E L+PYI+R++ G+ + + 
Sbjct: 30  QEKVFQELIQSAKNTQFGKDHHFQEIISHSDFVKNVPIRDYEALKPYIERVVAGEENVLW 89

Query: 88  TGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTS---YAFRNREFPIGKGKALQF 144
            GKPI   +++SGTT G  K++P     M   +Q  R +   Y  + ++     GK + F
Sbjct: 90  QGKPI-YFAKTSGTTSG-AKYIPITKASMPYHIQAARDAILCYVHQTQKADFVNGKMI-F 146

Query: 145 IYGSKQSKTKGGLNAG 160
           + GS   + K G+  G
Sbjct: 147 LQGSPVLEEKNGIKLG 162


>gi|188994261|ref|YP_001928513.1| auxin-regulated protein [Porphyromonas gingivalis ATCC 33277]
 gi|188593941|dbj|BAG32916.1| putative auxin-regulated protein [Porphyromonas gingivalis ATCC
           33277]
          Length = 509

 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 1/97 (1%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           ++  +T    AE IQ   LR+IL   A        G +  +  E F   VP+  +E  Q 
Sbjct: 22  LKTIDTYASRAEEIQDRQLRRILSSAAYTSTGIRYGFSRISSKECFARNVPVRDYESTQA 81

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLP 110
            I+R++ G+   +  G+  T  ++SSGTT  K KF+P
Sbjct: 82  EIERMLRGEKDILCPGR-CTWFAKSSGTTNSKSKFIP 117


>gi|427384637|ref|ZP_18881142.1| hypothetical protein HMPREF9447_02175 [Bacteroides oleiciplenus YIT
           12058]
 gi|425727898|gb|EKU90757.1| hypothetical protein HMPREF9447_02175 [Bacteroides oleiciplenus YIT
           12058]
          Length = 505

 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 87/389 (22%), Positives = 164/389 (42%), Gaps = 88/389 (22%)

Query: 24  AERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDI 83
           A  +Q + L +++    + E+ +          E FK  +P+ T+E+++PY++R+  G+ 
Sbjct: 26  AGELQHKVLERLVCMAENTEWGKKYDYKSIHTYEDFKKRLPIQTYEEVKPYVERLRAGE- 84

Query: 84  SPILTGKPITTISRSSGTTQGKPKFLPFNDE-LMETTLQIFRTSYAFRNREFPIGKGKAL 142
             +L    I   ++SSGTT  K KFLP + E L +T  Q  + + A       +G+    
Sbjct: 85  QNLLWPSEIRWFAKSSGTTNDKSKFLPVSRESLNDTHYQGGKDAVAIY-----LGQNPNS 139

Query: 143 QFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQSLYCH 202
           +F  G      KG +  G+ + N+    +   ++ A+                 Q++Y  
Sbjct: 140 RFFSG------KGLILGGSHSPNLNSRHSLVGDLSAI---------------LIQNVYPL 178

Query: 203 LLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRIT----VPSIRA 258
           + C  +  ++I L+ S F   +V                I    +S  +T    VPS   
Sbjct: 179 VNCVRVPSKKIALM-SDFESKMVA---------------IANSTISQNVTNLSGVPSWML 222

Query: 259 AMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAK--YLSGI-MTGSMEHYLKKLR- 314
            + K           I +K    S     + E++PN +  +  G+  T   E Y + +R 
Sbjct: 223 VLIK----------HILEKTGKQS-----LEEIWPNLEVFFHGGVAFTPYREQYKEVIRS 267

Query: 315 ---HYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIG-YFEFIPQRLGNLES 370
              HY          Y +SEG+ G   +P+ P  L    ++ + G ++EFIP  L +++ 
Sbjct: 268 SNMHYV-------ETYNASEGYFGTQNDPNDPSML----LMIDYGIFYEFIP--LEDVDK 314

Query: 371 QVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
           +     P+   L E++V + Y ++++  A
Sbjct: 315 E----NPRIYCLEEIEVEKNYALVISTSA 339


>gi|422619992|ref|ZP_16688677.1| auxin-responsive GH3-like protein, partial [Pseudomonas syringae
           pv. japonica str. M301072]
 gi|330900357|gb|EGH31776.1| auxin-responsive GH3-like protein, partial [Pseudomonas syringae
           pv. japonica str. M301072]
          Length = 224

 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 77/189 (40%), Gaps = 30/189 (15%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           ++ ++ + +  E  Q+  L ++L  +    + Q     G  D E F+  VP+ T+  LQP
Sbjct: 23  LDHWQRLFEQPEESQQRLLLRMLSASRDCAFGQAHDFAGIRDSEEFRKRVPIHTYAQLQP 82

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDE------------LMETTLQ 121
           +I+R    +  PILT  P     RSSG +  + K +P+  E            L +   Q
Sbjct: 83  WIER-AQHEQGPILTASPPLFFERSSGNSAVQ-KHIPYTQEFLGQLQGSLTVWLADMYRQ 140

Query: 122 IFRTSY--------------AFRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNV- 166
           +   S+              A    + PIG    LQ++ GS  +   G L      ++V 
Sbjct: 141 VPEISHGSGYWSMSPPLQQPAMTVNDIPIGSASDLQYLQGSAIAGLAGTLLIPELASDVA 200

Query: 167 -YRSSTFKA 174
            +R  T  A
Sbjct: 201 HWRRQTLLA 209


>gi|384097136|ref|ZP_09998257.1| CF4-like protein [Imtechella halotolerans K1]
 gi|383837104|gb|EID76504.1| CF4-like protein [Imtechella halotolerans K1]
          Length = 499

 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 68/138 (49%), Gaps = 6/138 (4%)

Query: 26  RIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISP 85
           R Q +   +++++  +  + Q+       +   F   VP+  +E+L+PY++R++ G+ + 
Sbjct: 28  RTQDKVFEELIKQGNATVFGQDHDFKSIKNHTDFVDRVPVRDYEELRPYVERVVLGEENV 87

Query: 86  ILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRT---SYAFRNREFPIGKGKAL 142
           +  GKP+   +++SGTT G  K++P   E M   +   R    SY     +     GK +
Sbjct: 88  LWKGKPL-YFAKTSGTTSG-AKYIPITKESMPNHISAARNAILSYIAETGKADFVDGKMI 145

Query: 143 QFIYGSKQSKTKGGLNAG 160
            F+ GS   K + G+  G
Sbjct: 146 -FLQGSPILKEQNGIKLG 162


>gi|228470233|ref|ZP_04055140.1| GH3 auxin-responsive promoter family protein [Porphyromonas uenonis
           60-3]
 gi|228308184|gb|EEK17047.1| GH3 auxin-responsive promoter family protein [Porphyromonas uenonis
           60-3]
          Length = 492

 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/97 (26%), Positives = 52/97 (53%), Gaps = 1/97 (1%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           ++  E   K +E IQ    ++I+       Y Q+L          ++  VP+V +E+L+P
Sbjct: 5   LKSIERYAKQSEAIQMRQFKRIMRVLRGTAYEQSLTSEPIRTYSDYQRIVPIVEYEELRP 64

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLP 110
           +++R++ G+ + ++ G      + SSGT+ G+ K+LP
Sbjct: 65  WVERMLQGERNQLIKGS-CRWFATSSGTSGGRSKYLP 100


>gi|224577569|gb|ACN57458.1| At2g23170-like protein [Capsella rubella]
 gi|224577571|gb|ACN57459.1| At2g23170-like protein [Capsella rubella]
 gi|224577573|gb|ACN57460.1| At2g23170-like protein [Capsella rubella]
 gi|224577575|gb|ACN57461.1| At2g23170-like protein [Capsella rubella]
 gi|224577577|gb|ACN57462.1| At2g23170-like protein [Capsella rubella]
 gi|224577579|gb|ACN57463.1| At2g23170-like protein [Capsella rubella]
 gi|224577581|gb|ACN57464.1| At2g23170-like protein [Capsella rubella]
 gi|224577583|gb|ACN57465.1| At2g23170-like protein [Capsella rubella]
 gi|224577585|gb|ACN57466.1| At2g23170-like protein [Capsella rubella]
 gi|224577587|gb|ACN57467.1| At2g23170-like protein [Capsella rubella]
 gi|224577589|gb|ACN57468.1| At2g23170-like protein [Capsella rubella]
 gi|224577591|gb|ACN57469.1| At2g23170-like protein [Capsella rubella]
 gi|224577593|gb|ACN57470.1| At2g23170-like protein [Capsella rubella]
 gi|224577595|gb|ACN57471.1| At2g23170-like protein [Capsella rubella]
          Length = 177

 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 7/68 (10%)

Query: 332 GWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEY 391
            + G N+ P   P   ++ ++PN+ YFEF+P  +    S++       V L +V++G+EY
Sbjct: 1   SYFGINLKPICKPSEVSYTIMPNMAYFEFLPHEVATEASEL-------VELADVEIGKEY 53

Query: 392 EIIVTNVA 399
           E+++T  A
Sbjct: 54  ELVITTYA 61


>gi|225012271|ref|ZP_03702708.1| GH3 auxin-responsive promoter [Flavobacteria bacterium MS024-2A]
 gi|225003826|gb|EEG41799.1| GH3 auxin-responsive promoter [Flavobacteria bacterium MS024-2A]
          Length = 505

 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 1/104 (0%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           I + E   K    +Q E L  +L +    E     G +   +   FK+ VPL T+E ++ 
Sbjct: 18  IHQIELFIKYPHEVQEELLHNLLSKAHQTETGMRHGFDSIRNYTDFKNQVPLSTYESIEH 77

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
            I+R   G    I    PI   ++SSGTT  K K++P + E +E
Sbjct: 78  QIERCRKG-TQNIFWPTPIKWFAKSSGTTNSKSKYIPVSVEALE 120


>gi|345881985|ref|ZP_08833495.1| hypothetical protein HMPREF9431_02159 [Prevotella oulorum F0390]
 gi|343918644|gb|EGV29407.1| hypothetical protein HMPREF9431_02159 [Prevotella oulorum F0390]
          Length = 508

 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/96 (27%), Positives = 53/96 (55%), Gaps = 1/96 (1%)

Query: 15  EEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPY 74
           ++ E     A  +Q + L +++ + A+ EY + + +N     + F   VP+ ++E+L+  
Sbjct: 16  KQLERYDDAAIALQHDVLMRLVAQGANTEYGRKVQMNRVATYDDFAKLVPVNSYEELKAN 75

Query: 75  IQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLP 110
           I R+  G+ + +  G+ +   ++SSGTT  K KF+P
Sbjct: 76  IDRMRHGESNVLWPGR-VRFFAKSSGTTNDKSKFIP 110


>gi|224577617|gb|ACN57482.1| At2g23170-like protein [Capsella grandiflora]
          Length = 177

 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 7/68 (10%)

Query: 332 GWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEY 391
            + G N+ P   P   ++ ++PN+ YFEF+P  +    S++       V L +V++G+EY
Sbjct: 1   SYFGINLKPICKPSEVSYTIMPNMAYFEFLPHEVATEASEL-------VELADVEIGKEY 53

Query: 392 EIIVTNVA 399
           E+++T  A
Sbjct: 54  ELVITTYA 61


>gi|336172160|ref|YP_004579298.1| GH3 auxin-responsive promoter [Lacinutrix sp. 5H-3-7-4]
 gi|334726732|gb|AEH00870.1| GH3 auxin-responsive promoter [Lacinutrix sp. 5H-3-7-4]
          Length = 499

 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 69/138 (50%), Gaps = 10/138 (7%)

Query: 28  QRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPIL 87
           Q +  + ++ +    E+ ++       +   F   VP+  +E L+PY+++++ G+ + + 
Sbjct: 30  QNKVFQNLITQAEKTEFGKDHDFKNIKNHHDFVKRVPIRDYEALKPYVEKVVAGEENILW 89

Query: 88  TGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTS-----YAFRNREFPIGKGKAL 142
           TGKP+   +++SGTT G  K++P   E M   ++  R +     +   N +F  GK   +
Sbjct: 90  TGKPL-YFAKTSGTTSG-AKYIPITAESMPNHIKAARNAILLYIHETGNSKFVDGK---M 144

Query: 143 QFIYGSKQSKTKGGLNAG 160
            F+ GS   K + G+  G
Sbjct: 145 IFLQGSPILKEENGVQLG 162


>gi|284040755|ref|YP_003390685.1| GH3 auxin-responsive promoter [Spirosoma linguale DSM 74]
 gi|283820048|gb|ADB41886.1| GH3 auxin-responsive promoter [Spirosoma linguale DSM 74]
          Length = 500

 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 8/108 (7%)

Query: 57  ESFKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELM 116
           + F+  VP+  +EDL+PYI++I+ G    +  GKP+   +++SGTT G  K++P   + +
Sbjct: 59  QEFRQAVPVRDYEDLKPYIEQILSGGTDVLWQGKPL-YFAKTSGTTSGT-KYIPITRDSI 116

Query: 117 ETTLQIFRTSYAFRNREFPIGKG----KALQFIYGSKQSKTKGGLNAG 160
              +   R   A  N     G      K L F+ GS +   K G+N G
Sbjct: 117 PNHINSARD--ALLNYINETGNSAFLDKKLIFLSGSPELTQKAGINIG 162


>gi|313885867|ref|ZP_07819608.1| GH3 auxin-responsive promoter [Porphyromonas asaccharolytica
           PR426713P-I]
 gi|312924696|gb|EFR35464.1| GH3 auxin-responsive promoter [Porphyromonas asaccharolytica
           PR426713P-I]
          Length = 503

 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/97 (26%), Positives = 52/97 (53%), Gaps = 1/97 (1%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           ++  E   K +E IQ    ++I+       Y Q+L          ++  VP+V +E+L+P
Sbjct: 16  LKSIEQYAKQSEAIQMRQFKRIMRVLNGTAYEQSLTSEPIRTYSDYQRIVPIVEYEELRP 75

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLP 110
           +++R++ G+ + ++ G      + SSGT+ G+ K+LP
Sbjct: 76  WVERMLQGERNQLIKGS-CRWFATSSGTSGGRSKYLP 111


>gi|224577619|gb|ACN57483.1| At2g23170-like protein [Capsella grandiflora]
          Length = 177

 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 7/68 (10%)

Query: 332 GWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEY 391
            + G N+ P   P   ++ ++PN+ YFEF+P  +    S++       V L +V++G+EY
Sbjct: 1   SYFGINLKPICKPSEVSYTIMPNMAYFEFLPHEVATEASEL-------VELADVEIGKEY 53

Query: 392 EIIVTNVA 399
           E+++T  A
Sbjct: 54  ELVITTYA 61


>gi|224577609|gb|ACN57478.1| At2g23170-like protein [Capsella grandiflora]
          Length = 177

 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/68 (30%), Positives = 40/68 (58%), Gaps = 7/68 (10%)

Query: 332 GWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEY 391
            + G N+ P   P   ++ ++PN+ YFEF+P  +   ++++       V L +V+VG+EY
Sbjct: 1   SYFGINLKPICKPSEVSYTIMPNMAYFEFLPHEVATEKTEL-------VELADVEVGKEY 53

Query: 392 EIIVTNVA 399
           E+++T  A
Sbjct: 54  ELVITTYA 61


>gi|392390085|ref|YP_006426688.1| GH3 auxin-responsive promoter-binding protein [Ornithobacterium
           rhinotracheale DSM 15997]
 gi|390521163|gb|AFL96894.1| GH3 auxin-responsive promoter-binding protein [Ornithobacterium
           rhinotracheale DSM 15997]
          Length = 496

 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 74/143 (51%), Gaps = 10/143 (6%)

Query: 23  DAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGD 82
           +AE+ Q++    ++++  + E+ +          + F+  VPL  +E L+ YI +I++G 
Sbjct: 24  NAEQAQQKLFLAMVKKAQNTEFGKIHHFREIKTIKDFQERVPLQDYETLKSYIDQIVEGK 83

Query: 83  ISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAF-----RNREFPIG 137
            + +  GKP+   +++SGTT G  K++P + E M   ++  R +  +     +N  F  G
Sbjct: 84  ENVLWPGKPL-YFAKTSGTTSG-TKYIPISKESMPYHIEAARNALLYYIKNSQNANFVNG 141

Query: 138 KGKALQFIYGSKQSKTKGGLNAG 160
           K   + F+ GS + + K G+  G
Sbjct: 142 K---MIFLQGSPELEEKNGIKVG 161


>gi|224577629|gb|ACN57488.1| At2g23170-like protein [Capsella grandiflora]
          Length = 177

 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 7/68 (10%)

Query: 332 GWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEY 391
            + G N+ P   P   ++ ++PN+ YFEF+P  +    S++       V L +V++G+EY
Sbjct: 1   SYFGINLKPICKPSEVSYTIMPNMAYFEFLPHEVATEASEL-------VELADVEIGKEY 53

Query: 392 EIIVTNVA 399
           E+++T  A
Sbjct: 54  ELVITTYA 61


>gi|86134464|ref|ZP_01053046.1| GH3 auxin-responsive promoter [Polaribacter sp. MED152]
 gi|85821327|gb|EAQ42474.1| GH3 auxin-responsive promoter [Polaribacter sp. MED152]
          Length = 502

 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 1/104 (0%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           I + E   K    +Q E L K+   +   E+ +    +       F   VP+  +E ++P
Sbjct: 18  IHQIELFLKYPTDVQNELLLKLTSASKRTEFGKKHNFSSIKSYTDFAMQVPIQKYESIEP 77

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
            I+R   G+   +    PI   ++SSGTT  K KF+P +DE +E
Sbjct: 78  LIERCRKGE-QNLFWHTPIKWFAKSSGTTNAKSKFIPVSDEALE 120


>gi|313676962|ref|YP_004054958.1| gh3 auxin-responsive promoter [Marivirga tractuosa DSM 4126]
 gi|312943660|gb|ADR22850.1| GH3 auxin-responsive promoter [Marivirga tractuosa DSM 4126]
          Length = 498

 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 6/136 (4%)

Query: 28  QRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPIL 87
           Q +  + I+ +  +  + ++ G       E FK  VP+  +E L+PY+ +I+ G+   + 
Sbjct: 30  QVKIFKNIIHKAKNTAFGKDHGFENIQTYEDFKKQVPIRDYEALKPYVDKILQGESDVLW 89

Query: 88  TGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRT---SYAFRNREFPIGKGKALQF 144
            GKP    +++SGTT G  K++P   + +   +   +    SY     +     GK L F
Sbjct: 90  PGKP-AYFAKTSGTTSGT-KYIPITKDSIPNHINSAKNALLSYVHETGKSQFLDGK-LIF 146

Query: 145 IYGSKQSKTKGGLNAG 160
           + G+   + K G+N G
Sbjct: 147 LSGAPTLEQKAGINTG 162


>gi|224577623|gb|ACN57485.1| At2g23170-like protein [Capsella grandiflora]
          Length = 177

 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 7/68 (10%)

Query: 332 GWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEY 391
            + G N+ P   P   ++ ++PN+ YFEF+P  +    S++       V L +V++G+EY
Sbjct: 1   SYFGINLKPICKPSEVSYTIMPNMAYFEFLPHEVATEASEL-------VELADVEIGKEY 53

Query: 392 EIIVTNVA 399
           E+++T  A
Sbjct: 54  ELVITTYA 61


>gi|332663966|ref|YP_004446754.1| GH3 auxin-responsive promoter [Haliscomenobacter hydrossis DSM
           1100]
 gi|332332780|gb|AEE49881.1| GH3 auxin-responsive promoter [Haliscomenobacter hydrossis DSM
           1100]
          Length = 508

 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 1/71 (1%)

Query: 40  ASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSS 99
           A  E+ ++   +   +PE F+  + L  +EDL+P+I R++ G+   +  G+ I   S+SS
Sbjct: 45  ADTEWGKSHFFHDIRNPEDFRQAIALTDYEDLKPFIGRMMLGERDVLWPGQ-INWYSKSS 103

Query: 100 GTTQGKPKFLP 110
           GTT  K KF+P
Sbjct: 104 GTTNDKSKFIP 114


>gi|224577597|gb|ACN57472.1| At2g23170-like protein [Capsella grandiflora]
 gi|224577601|gb|ACN57474.1| At2g23170-like protein [Capsella grandiflora]
 gi|224577605|gb|ACN57476.1| At2g23170-like protein [Capsella grandiflora]
 gi|224577607|gb|ACN57477.1| At2g23170-like protein [Capsella grandiflora]
 gi|224577615|gb|ACN57481.1| At2g23170-like protein [Capsella grandiflora]
 gi|224577621|gb|ACN57484.1| At2g23170-like protein [Capsella grandiflora]
 gi|224577627|gb|ACN57487.1| At2g23170-like protein [Capsella grandiflora]
 gi|224577631|gb|ACN57489.1| At2g23170-like protein [Capsella grandiflora]
          Length = 177

 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 7/68 (10%)

Query: 332 GWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEY 391
            + G N+ P   P   ++ ++PN+ YFEF+P  +    S++       V L +V++G+EY
Sbjct: 1   SYFGINLKPICKPSEVSYTIMPNMAYFEFLPHEVATEASEL-------VELADVEIGKEY 53

Query: 392 EIIVTNVA 399
           E+++T  A
Sbjct: 54  ELVITTYA 61


>gi|224577599|gb|ACN57473.1| At2g23170-like protein [Capsella grandiflora]
 gi|224577625|gb|ACN57486.1| At2g23170-like protein [Capsella grandiflora]
          Length = 177

 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 7/68 (10%)

Query: 332 GWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEY 391
            + G N+ P   P   ++ ++PN+ YFEF+P  +    S++       V L +V++G+EY
Sbjct: 1   SYFGINLKPICKPSEVSYTIMPNMAYFEFLPHEVATEASEL-------VELADVEIGKEY 53

Query: 392 EIIVTNVA 399
           E+++T  A
Sbjct: 54  ELVITTYA 61


>gi|363581125|ref|ZP_09313935.1| hypothetical protein FbacHQ_06420 [Flavobacteriaceae bacterium
           HQM9]
          Length = 498

 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 66/135 (48%), Gaps = 4/135 (2%)

Query: 28  QRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPIL 87
           Q E  R ++ +  +  + ++   +  T  + F S VP+  +E L+PY+ R++ G+   + 
Sbjct: 30  QEEVFRYLINKAKNTAFGKDHQFSEITSYQDFVSKVPIRDYEALRPYVDRMVAGEADVLW 89

Query: 88  TGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTS-YAFRNREFPIG-KGKALQFI 145
             KP+   +++SGTT G  K++P   E M T     R +  ++ N     G     + F+
Sbjct: 90  PEKPL-YYAKTSGTTSGS-KYIPITHESMPTHTNAARNAILSYINETGKTGFVDNKMIFL 147

Query: 146 YGSKQSKTKGGLNAG 160
            GS +   K G+N G
Sbjct: 148 QGSPELTDKNGVNLG 162


>gi|224577603|gb|ACN57475.1| At2g23170-like protein [Capsella grandiflora]
 gi|224577611|gb|ACN57479.1| At2g23170-like protein [Capsella grandiflora]
 gi|224577613|gb|ACN57480.1| At2g23170-like protein [Capsella grandiflora]
          Length = 177

 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 7/68 (10%)

Query: 332 GWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEY 391
            + G N+ P   P   ++ ++PN+ YFEF+P  +    S++       V L +V++G+EY
Sbjct: 1   SYFGINLKPICKPSEVSYTIMPNMAYFEFLPHEVATEASEL-------VELADVEIGKEY 53

Query: 392 EIIVTNVA 399
           E+++T  A
Sbjct: 54  ELVITTYA 61


>gi|345868543|ref|ZP_08820526.1| GH3 auxin-responsive promoter family protein [Bizionia
           argentinensis JUB59]
 gi|344047054|gb|EGV42695.1| GH3 auxin-responsive promoter family protein [Bizionia
           argentinensis JUB59]
          Length = 505

 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 76/174 (43%), Gaps = 6/174 (3%)

Query: 16  EFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYI 75
           + E   K    +Q E L ++L +    E+ +          ++F   VP+  +E+ Q  I
Sbjct: 20  QIELFLKYPNEVQEELLMQLLYKARDTEFGKKYDFESIKSYQTFSDRVPISNYEEYQSMI 79

Query: 76  QRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMET----TLQIFRTSYAFRN 131
           +R   G+ + I   +PI   ++SSGTT  K KF+P + + +E       +     Y   N
Sbjct: 80  ERSRLGE-NNIFWSQPIKWFAKSSGTTNAKSKFIPVSQDSLENCHYAASKDLLCMYLNNN 138

Query: 132 REFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCS 185
               +  GK+L+ + GSK+   + G   G  +  +  +  F AE  +  S   S
Sbjct: 139 ENAQLFTGKSLR-LGGSKELYKENGTAFGDLSAILIDNMPFWAEYSSTPSSKVS 191


>gi|357399420|ref|YP_004911345.1| hypothetical protein SCAT_1818 [Streptomyces cattleya NRRL 8057 =
           DSM 46488]
 gi|386355460|ref|YP_006053706.1| hypothetical protein SCATT_18130 [Streptomyces cattleya NRRL 8057 =
           DSM 46488]
 gi|337765829|emb|CCB74538.1| conserved protein of unknown function [Streptomyces cattleya NRRL
           8057 = DSM 46488]
 gi|365805968|gb|AEW94184.1| hypothetical protein SCATT_18130 [Streptomyces cattleya NRRL 8057 =
           DSM 46488]
          Length = 580

 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 76/383 (19%), Positives = 151/383 (39%), Gaps = 42/383 (10%)

Query: 28  QRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPIL 87
           Q+  L  +LE N+  E+ +  G       + F+  VP+  +    PYI+R   G+ + + 
Sbjct: 50  QKRVLADLLEFNSGTEFGKRHGFAAIRTVDDFRRAVPVQDYAAHAPYIERTAAGEANVLS 109

Query: 88  TGKPITTISRSSGTTQGKPKFLPFNDELMETT-LQIFRTSYAFRNREFP--IGKGKALQF 144
             +P+   + SSG+T G  K +P     M TT    +  ++A   R FP    +  A+  
Sbjct: 110 ADRPVVYFT-SSGST-GAHKKIPVTARFMRTTFFPFYYAAWAPLLRHFPEVAARPDAVLN 167

Query: 145 IYGSKQSK----TKGGLNAGTATTN--VYRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQS 198
           +     ++      G  + G +  +          AE+         P E    P  H  
Sbjct: 168 LKHDPPARPPVMADGRPHVGASQVDFGAKFGEPLAAELGTRAPWATLPVET--DPADHLE 225

Query: 199 LYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPSIRA 258
                L   + + +++++       +        L W  +  ++R+G      TV  +R 
Sbjct: 226 RLYLRLRLAV-QGDVRMLIGINPAVIAAVPYQLGLWWPRIVREVRDG------TVGGVRT 278

Query: 259 AMSKILKPNPELADLIHKKCSGLSNWYGLI--PELFPNAKYLSGIMTGSMEHYLKKLRH- 315
                  P+P  A  + +    L+ ++G +    ++P  + L    TG    Y+  LR  
Sbjct: 279 G-----SPDPARAAELER----LAGYFGTVRPAHVWPRVRALFCWTTGVASLYMPALRRE 329

Query: 316 YAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCI 375
           Y  D+  + A   +SEG +   ++    PE  T   + +   +EF+P          L  
Sbjct: 330 YGVDVATLPAPVAASEGPVAVALDRH--PEAGT--PVASAALYEFVPA------DDDLAP 379

Query: 376 EPKPVGLTEVKVGEEYEIIVTNV 398
           + + + + E++ G +Y ++ ++V
Sbjct: 380 DSETLLVHELEPGHDYHVVFSHV 402


>gi|238022025|ref|ZP_04602451.1| hypothetical protein GCWU000324_01930 [Kingella oralis ATCC 51147]
 gi|237866639|gb|EEP67681.1| hypothetical protein GCWU000324_01930 [Kingella oralis ATCC 51147]
          Length = 499

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/163 (23%), Positives = 64/163 (39%), Gaps = 5/163 (3%)

Query: 17  FETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQ 76
           ++T  +  +  Q + L  IL  N  +++ Q         PE +   VP+ ++E L P I 
Sbjct: 15  YQTALRRPQHTQAQILHTILRSNQHSQFGQQHNFAQIHSPEDYAQRVPIQSYESLAPLIA 74

Query: 77  RIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFPI 136
           R   G+ + +LT  PI     + G+T G  K +P+   L+          +A    + P 
Sbjct: 75  RHAHGERN-LLTSSPIIQFEETGGSTAGA-KLIPYTAPLLTAFQHGIHAWFADLIAQRPH 132

Query: 137 GKGKALQFIY---GSKQSKTKGGLNAGTATTNVYRSSTFKAEM 176
                L FI       +S T  G+  GT     Y  S     +
Sbjct: 133 AFSGCLYFIISPAARSRSHTASGIPIGTGNDLNYLGSALAQRI 175


>gi|255037173|ref|YP_003087794.1| GH3 auxin-responsive promoter [Dyadobacter fermentans DSM 18053]
 gi|254949929|gb|ACT94629.1| GH3 auxin-responsive promoter [Dyadobacter fermentans DSM 18053]
          Length = 504

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 1/104 (0%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
            E  E   K     Q+    +++E     E+            + F+  VP+  +E L P
Sbjct: 16  FERIEQFMKYPIETQQRIFSELIETARYTEWGSRYNYAQIKSVQEFQEQVPVSAYEQLYP 75

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
           YI+R++ G+ + +L    I   S+SSGTT  + KFLP + E +E
Sbjct: 76  YIERVLKGEPN-VLWPSQIEWFSKSSGTTNARSKFLPVSPEALE 118


>gi|163754607|ref|ZP_02161729.1| auxin-regulated protein [Kordia algicida OT-1]
 gi|161325548|gb|EDP96875.1| auxin-regulated protein [Kordia algicida OT-1]
          Length = 499

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/140 (25%), Positives = 67/140 (47%), Gaps = 10/140 (7%)

Query: 26  RIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISP 85
           + Q +  +++++E A   + ++         + F   VP+  +E L+ Y+ R++ G+   
Sbjct: 29  QTQEKVFKRLIQEAAHTAFGKDHDFQNIHSHDDFVKRVPIRDYEGLRLYVDRVVAGEKDI 88

Query: 86  ILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFR-----NREFPIGKGK 140
           +  GKP+   +++SGTT G  K++P   E M T ++  R +         N +F  GK  
Sbjct: 89  LWKGKPL-YFAKTSGTTSG-AKYIPITKESMPTHVEAARNAILLYIAETGNTDFVDGK-- 144

Query: 141 ALQFIYGSKQSKTKGGLNAG 160
            + F+ GS     K G+  G
Sbjct: 145 -MIFLQGSPVLNEKNGVKLG 163


>gi|423223415|ref|ZP_17209884.1| hypothetical protein HMPREF1062_02070 [Bacteroides cellulosilyticus
           CL02T12C19]
 gi|392638951|gb|EIY32782.1| hypothetical protein HMPREF1062_02070 [Bacteroides cellulosilyticus
           CL02T12C19]
          Length = 503

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 51/96 (53%), Gaps = 1/96 (1%)

Query: 24  AERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDI 83
           A  +Q   L +++    + E+ +          E F++ +P+ T+E+++PY++R+  G+ 
Sbjct: 26  AGELQHRVLDRLVRMAENTEWGKKYDYKSIHTYEDFRNRLPIQTYEEVKPYVERLRAGE- 84

Query: 84  SPILTGKPITTISRSSGTTQGKPKFLPFNDELMETT 119
             +L    I   ++SSGTT  K KFLP + E +  T
Sbjct: 85  QNLLWPSEIRWFAKSSGTTNDKSKFLPVSKEALNDT 120


>gi|224536734|ref|ZP_03677273.1| hypothetical protein BACCELL_01610 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224521650|gb|EEF90755.1| hypothetical protein BACCELL_01610 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 503

 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 51/96 (53%), Gaps = 1/96 (1%)

Query: 24  AERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDI 83
           A  +Q   L +++    + E+ +          E F++ +P+ T+E+++PY++R+  G+ 
Sbjct: 26  AGELQHRVLDRLVRMAENTEWGKKYDYKSIHTYEDFRNRLPIQTYEEVKPYVERLRAGE- 84

Query: 84  SPILTGKPITTISRSSGTTQGKPKFLPFNDELMETT 119
             +L    I   ++SSGTT  K KFLP + E +  T
Sbjct: 85  QNLLWPSEIRWFAKSSGTTNDKSKFLPVSKEALNDT 120


>gi|392586601|gb|EIW75937.1| hypothetical protein CONPUDRAFT_131422 [Coniophora puteana
           RWD-64-598 SS2]
          Length = 417

 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 49/205 (23%), Positives = 89/205 (43%), Gaps = 13/205 (6%)

Query: 194 DFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITV 253
           ++   L  H    L  R  + ++  T++ +++   +  +  WE L + I +G L      
Sbjct: 52  NYRSLLLTHAAFALAERS-VDVLSLTWSTTVIDFMQWIDEEWETLLEGIEKGKLPQFPET 110

Query: 254 PSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKL 313
             + AA++ +   +PE A+ + K         G   + +P    L  I TG+ E  L KL
Sbjct: 111 EEVHAAIATMFYADPERAEELRKIGPPSRTAVGWATKTWPGLNSLRAISTGAFERLLPKL 170

Query: 314 RHYAG-DLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQV 372
           R + G D+ + +  YG +E  +G      +P   + F V+ N  Y E + + L + E   
Sbjct: 171 RAFVGPDVKVATPGYGCTECPVGGTFGAEVP---SVFKVV-NDNYIELL-EILDDGEDGA 225

Query: 373 LCIEPKPVGLTEVKVGEEYEIIVTN 397
           +        L EV+ G+ YE + T 
Sbjct: 226 V------KQLWEVEFGKLYEPVFTT 244


>gi|85818162|gb|EAQ39322.1| GH3 auxin-responsive promoter [Dokdonia donghaensis MED134]
          Length = 503

 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 74/176 (42%), Gaps = 6/176 (3%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           I + E   K    +Q E   K++++    E  +            F   +P+ ++E+ Q 
Sbjct: 18  IHQMELFMKYPAEVQEELRAKLIDKAKDTEIGKKYDFRSIRSYNDFAQTIPISSYEENQA 77

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME----TTLQIFRTSYAF 129
           YI+R   G+ S IL   PI   ++SSGTT  + K++P + E +E       +     Y  
Sbjct: 78  YIERSRKGE-SNILWPTPIKWFAQSSGTTNARSKYIPVSPESLEDCHYAASKDLLCMYLN 136

Query: 130 RNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCS 185
            N    +  GK L+ + GSKQ     G   G  +  +  +  F AE  +  +   S
Sbjct: 137 NNEGSHLFSGKGLR-LGGSKQLYQDNGTVYGDLSAILIDNMPFWAEFSSTPNHDIS 191


>gi|150026510|ref|YP_001297336.1| hypothetical protein FP2482 [Flavobacterium psychrophilum JIP02/86]
 gi|149773051|emb|CAL44535.1| Protein of unknown function [Flavobacterium psychrophilum JIP02/86]
          Length = 496

 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 64/136 (47%), Gaps = 6/136 (4%)

Query: 28  QRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPIL 87
           Q++  + +L ++    + QN       +   F   VP+  +E L+PYI +++ G+   + 
Sbjct: 30  QKKVFQSLLFQSKETLFGQNHNFFDIKNHTDFIKNVPIRDYEALKPYIDQVVKGEKDILW 89

Query: 88  TGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRT---SYAFRNREFPIGKGKALQF 144
            GKP+   +++SGTT G  K++P   E M   +Q  R    SY           GK + F
Sbjct: 90  KGKPL-YFAKTSGTTSG-AKYIPLTKESMPFHIQAARNAILSYIHETGNANFVNGKMI-F 146

Query: 145 IYGSKQSKTKGGLNAG 160
           + GS   + K G+  G
Sbjct: 147 LQGSPILEEKNGIKLG 162


>gi|402307603|ref|ZP_10826625.1| GH3 auxin-responsive promoter [Prevotella sp. MSX73]
 gi|400378315|gb|EJP31173.1| GH3 auxin-responsive promoter [Prevotella sp. MSX73]
          Length = 514

 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 1/96 (1%)

Query: 15  EEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPY 74
           +E E     A  +Q   L+ +LE+ +  EY     LN     E F + VP+ T+E+L+  
Sbjct: 19  KELEKHYTAAAELQHRVLQHLLEKGSDTEYGIKHLLNNTHSYEEFTANVPVNTYEELKGS 78

Query: 75  IQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLP 110
           I R+  G+   +L    +   ++SSGTT  K KF+P
Sbjct: 79  IDRMRHGE-GDVLWPGTVKWYAKSSGTTNDKSKFIP 113


>gi|405351775|ref|ZP_11023193.1| putative auxin-responsive-like protein [Chondromyces apiculatus DSM
           436]
 gi|397093076|gb|EJJ23808.1| putative auxin-responsive-like protein [Myxococcus sp. (contaminant
           ex DSM 436)]
          Length = 555

 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 65/283 (22%), Positives = 111/283 (39%), Gaps = 20/283 (7%)

Query: 16  EFETITKDAERIQRETLRKILEENASAEYLQNL-GLNGRTDPESFKSCVPLVTHEDLQPY 74
            F    ++ E  Q   L ++L     ++  + + G         F+  VP VT + L P 
Sbjct: 21  RFHRALRNPEAAQAVCLERVLRSVRGSQQAERIAGFRHLRSTRDFQDAVPWVTPDALVPD 80

Query: 75  IQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTS-YAFRNRE 133
           ++RI  G  S +LT + +     S G++ G  K +P    L++   +      +   +R 
Sbjct: 81  LERIAAG-ASRVLTRESVLRFELSGGSS-GASKRVPVTRGLLDEFQRALSPMLFEILHRR 138

Query: 134 FPIGKGKALQFI--YGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIF 191
             +  G +   I     KQ +T GG+  G+A  + Y S T +  +  +      P +V  
Sbjct: 139 PSVRMGPSYWSISPLARKQERTAGGIPVGSADDSAYFSRTLRPLLSRI---FAVPGDVGA 195

Query: 192 GPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRI 251
            PD     Y   L  L+  E++ L+       L       E   + L +D+R GV     
Sbjct: 196 LPDVESCRYV-TLWHLVACEDLTLISVWNPSFLSLLMAALERHGDRLAEDLRRGVCRPPT 254

Query: 252 TV-----PSIRAAMSKI-LKPNPE----LADLIHKKCSGLSNW 284
           +       ++R  MS++   P PE    L DL+    S    W
Sbjct: 255 SGAGQDDAALRQVMSRMCFSPRPERASRLRDLLRSGGSARELW 297


>gi|294777581|ref|ZP_06743032.1| GH3 auxin-responsive promoter [Bacteroides vulgatus PC510]
 gi|294448649|gb|EFG17198.1| GH3 auxin-responsive promoter [Bacteroides vulgatus PC510]
          Length = 482

 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 52/91 (57%), Gaps = 2/91 (2%)

Query: 24  AERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDI 83
           AE +Q +   +++++ A  E+    G       + F+  VP+ T+E+++PY++R+  G+ 
Sbjct: 6   AEALQHKVFCRLMKDAAHTEWGLKYGYKDIKRYQDFQR-VPIQTYEEIKPYVERMRHGEK 64

Query: 84  SPILTGKPITTISRSSGTTQGKPKFLPFNDE 114
             +  G+ +   ++SSGTT  K KF+P + E
Sbjct: 65  DVLWRGE-VQWFAKSSGTTNDKSKFIPVSRE 94


>gi|332882687|ref|ZP_08450299.1| GH3 auxin-responsive promoter [Capnocytophaga sp. oral taxon 329
           str. F0087]
 gi|332679487|gb|EGJ52472.1| GH3 auxin-responsive promoter [Capnocytophaga sp. oral taxon 329
           str. F0087]
          Length = 495

 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/136 (24%), Positives = 69/136 (50%), Gaps = 6/136 (4%)

Query: 28  QRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPIL 87
           Q++   +++ +     + ++   +     + F + VP+  +E L+PYI+R+++G+ + + 
Sbjct: 29  QQKVFEQLIAQAKDTAFGRDHHFDEIKSYDDFVARVPIRDYEALRPYIERVVEGEPNVLW 88

Query: 88  TGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTS---YAFRNREFPIGKGKALQF 144
            GKP+   +++SGTT G  K++P     M   +Q  R +   Y    ++    +GK + F
Sbjct: 89  KGKPL-YFAKTSGTTSG-AKYIPITKASMPFHIQAARDAILCYIHETKKAAFVEGKMI-F 145

Query: 145 IYGSKQSKTKGGLNAG 160
           + GS     K G+  G
Sbjct: 146 LQGSPILGEKNGIKTG 161


>gi|288925900|ref|ZP_06419830.1| GH3 auxin-responsive promoter family protein [Prevotella buccae
           D17]
 gi|288337324|gb|EFC75680.1| GH3 auxin-responsive promoter family protein [Prevotella buccae
           D17]
          Length = 511

 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 1/96 (1%)

Query: 15  EEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPY 74
           +E E     A  +Q   L+ +LE+ +  EY     LN     E F + VP+ T+E+L+  
Sbjct: 16  KELEKHYTAAAELQHRVLQHLLEKGSDTEYGIKHLLNNTHSYEEFTANVPVNTYEELKGS 75

Query: 75  IQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLP 110
           I R+  G+   +L    +   ++SSGTT  K KF+P
Sbjct: 76  IDRMRHGE-GDVLWPGTVKWYAKSSGTTNDKSKFIP 110


>gi|340753290|ref|ZP_08690077.1| hypothetical protein FSAG_00943 [Fusobacterium sp. 2_1_31]
 gi|340566987|gb|EEO37933.2| hypothetical protein FSAG_00943 [Fusobacterium sp. 2_1_31]
          Length = 515

 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 47/89 (52%), Gaps = 2/89 (2%)

Query: 27  IQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPI 86
           IQ   L++ILE N ++ Y +    +     E F+  VPL  +ED   YI++I +G+   +
Sbjct: 34  IQENKLKEILENNKNSLYGKKYNFDKIKTIEDFQREVPLTKYEDYLAYIEKIKNGE-EHV 92

Query: 87  LTGKPITTISRSSGTTQGKPKFLPFNDEL 115
           LT + +     +SG+T    K +P+ D L
Sbjct: 93  LTYEKVKMFELTSGSTSA-SKLIPYTDSL 120


>gi|229496343|ref|ZP_04390063.1| GH3 auxin-responsive promoter family protein [Porphyromonas
           endodontalis ATCC 35406]
 gi|229316921|gb|EEN82834.1| GH3 auxin-responsive promoter family protein [Porphyromonas
           endodontalis ATCC 35406]
          Length = 506

 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 1/91 (1%)

Query: 22  KDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDG 81
           + AE +Q    ++++    + EY         + P+ + S VPLV +EDL+ Y  R+I G
Sbjct: 25  QRAEELQYRQWQRVMRCLRATEYGWITRAAAVSTPDQYASIVPLVQYEDLRGYTDRMIQG 84

Query: 82  DISPILTGKPITTISRSSGTTQGKPKFLPFN 112
           + S +L        + SSGT+ G+ K++P N
Sbjct: 85  E-SNVLVRGGCNRFAVSSGTSGGRSKYIPVN 114



 Score = 39.3 bits (90), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 12/82 (14%)

Query: 327 YGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVK 386
           Y +SEG+ G   +P+ P   A   +L    Y+EFIP  L  L+S      PK + L EV+
Sbjct: 277 YNASEGFFGIQNDPNDP---AMLLMLDYGIYYEFIP--LAELDSPT----PKAIPLVEVE 327

Query: 387 VGEEYEIIVTNVAVAGSLFSRI 408
           VG+ Y ++++ +   G L+  I
Sbjct: 328 VGKTYALVISTL---GGLYRYI 346


>gi|332300700|ref|YP_004442621.1| GH3 auxin-responsive promoter [Porphyromonas asaccharolytica DSM
           20707]
 gi|332177763|gb|AEE13453.1| GH3 auxin-responsive promoter [Porphyromonas asaccharolytica DSM
           20707]
          Length = 503

 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 52/97 (53%), Gaps = 1/97 (1%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           ++  E   K +E IQ    ++I+       Y Q+L          ++  +P+V +E+L+P
Sbjct: 16  LKSIEQYAKQSEAIQMRQFKRIMRVLNGTAYEQSLTSEPIRTYSDYQRIIPIVEYEELRP 75

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLP 110
           +++R++ G+ + ++ G      + SSGT+ G+ K+LP
Sbjct: 76  WVERMLQGERNQLIKGS-CRWFATSSGTSGGRSKYLP 111


>gi|315606957|ref|ZP_07881963.1| GH3 auxin-responsive promoter family protein [Prevotella buccae
           ATCC 33574]
 gi|315251338|gb|EFU31321.1| GH3 auxin-responsive promoter family protein [Prevotella buccae
           ATCC 33574]
          Length = 514

 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 1/96 (1%)

Query: 15  EEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPY 74
           +E E     A  +Q   L+ +LE+ +  EY     LN     E F + VP+ T+E+L+  
Sbjct: 19  KELEKHYTAAAELQHRVLQHLLEKGSDTEYGIKHLLNNTHSYEEFTANVPVNTYEELKGS 78

Query: 75  IQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLP 110
           I R+  G+   +L    +   ++SSGTT  K KF+P
Sbjct: 79  IDRMRHGE-GDVLWPGTVKWYAKSSGTTNDKSKFIP 113


>gi|319640172|ref|ZP_07994898.1| auxin-regulated protein [Bacteroides sp. 3_1_40A]
 gi|317388159|gb|EFV69012.1| auxin-regulated protein [Bacteroides sp. 3_1_40A]
          Length = 501

 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 52/91 (57%), Gaps = 2/91 (2%)

Query: 24  AERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDI 83
           AE +Q +   +++++ A  E+    G       + F+  VP+ T+E+++PY++R+  G+ 
Sbjct: 25  AEALQHKVFCRLMKDAAHTEWGLKYGYKDIKRYQDFQR-VPIQTYEEIKPYVERMRHGEK 83

Query: 84  SPILTGKPITTISRSSGTTQGKPKFLPFNDE 114
             +  G+ +   ++SSGTT  K KF+P + E
Sbjct: 84  DVLWRGE-VQWFAKSSGTTNDKSKFIPVSRE 113


>gi|386819889|ref|ZP_10107105.1| GH3 auxin-responsive promoter-binding protein [Joostella marina DSM
           19592]
 gi|386424995|gb|EIJ38825.1| GH3 auxin-responsive promoter-binding protein [Joostella marina DSM
           19592]
          Length = 506

 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 63/132 (47%), Gaps = 6/132 (4%)

Query: 58  SFKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
           +F   VP+V +ED++P I+R   G+ S I     I   ++SSGTT  K KF+P + E +E
Sbjct: 62  TFADRVPIVRYEDIEPMIERARKGE-SNIFWPSNIKWFAKSSGTTNAKSKFIPVSTESLE 120

Query: 118 ----TTLQIFRTSYAFRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFK 173
                  +   + Y   N +  +  GK+L+ + GSK+         G  +  +  +  F 
Sbjct: 121 DCHFKAGKDMLSLYFNNNEDSKLFTGKSLR-LGGSKELYQDNNTFFGDLSAIIIDNMPFW 179

Query: 174 AEMKAMQSQCCS 185
           AEM +  S   S
Sbjct: 180 AEMSSTPSNKVS 191


>gi|345517192|ref|ZP_08796670.1| hypothetical protein BSFG_00411 [Bacteroides sp. 4_3_47FAA]
 gi|345457779|gb|EET14264.2| hypothetical protein BSFG_00411 [Bacteroides sp. 4_3_47FAA]
          Length = 512

 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 52/91 (57%), Gaps = 2/91 (2%)

Query: 24  AERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDI 83
           AE +Q +   +++++ A  E+    G       + F+  VP+ T+E+++PY++R+  G+ 
Sbjct: 36  AEALQHKVFCRLMKDAAHTEWGLKYGYKDIKRYQDFQR-VPIQTYEEIKPYVERMRHGEK 94

Query: 84  SPILTGKPITTISRSSGTTQGKPKFLPFNDE 114
             +  G+ +   ++SSGTT  K KF+P + E
Sbjct: 95  DVLWRGE-VQWFAKSSGTTNDKSKFIPVSRE 124


>gi|150003610|ref|YP_001298354.1| auxin-regulated protein [Bacteroides vulgatus ATCC 8482]
 gi|423313248|ref|ZP_17291184.1| hypothetical protein HMPREF1058_01796 [Bacteroides vulgatus
           CL09T03C04]
 gi|149932034|gb|ABR38732.1| putative auxin-regulated protein [Bacteroides vulgatus ATCC 8482]
 gi|392686462|gb|EIY79768.1| hypothetical protein HMPREF1058_01796 [Bacteroides vulgatus
           CL09T03C04]
          Length = 512

 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 52/91 (57%), Gaps = 2/91 (2%)

Query: 24  AERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDI 83
           AE +Q +   +++++ A  E+    G       + F+  VP+ T+E+++PY++R+  G+ 
Sbjct: 36  AEALQHKVFCRLMKDAAHTEWGLKYGYKDIKRYQDFQR-VPIQTYEEIKPYVERMRHGEK 94

Query: 84  SPILTGKPITTISRSSGTTQGKPKFLPFNDE 114
             +  G+ +   ++SSGTT  K KF+P + E
Sbjct: 95  DVLWRGE-VQWFAKSSGTTNDKSKFIPVSRE 124


>gi|126662742|ref|ZP_01733741.1| auxin-regulated protein [Flavobacteria bacterium BAL38]
 gi|126626121|gb|EAZ96810.1| auxin-regulated protein [Flavobacteria bacterium BAL38]
          Length = 509

 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 68/136 (50%), Gaps = 6/136 (4%)

Query: 28  QRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPIL 87
           Q++   ++++E +  ++ ++   +       F   VP+  +E L+ Y+ +++ G+ + + 
Sbjct: 30  QQKVFEELIKEASQTQFGKDHNFSAIKTFSDFAQKVPIRDYEGLKHYVDKVVKGEENVLW 89

Query: 88  TGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRT---SYAFRNREFPIGKGKALQF 144
            GKP+   +++SGTT G  K++P   E M   +Q  R    SY     +    KGK + F
Sbjct: 90  KGKPL-YFAKTSGTTSG-AKYIPLTKESMPFHIQAARNAILSYIHETGKAEFVKGKMI-F 146

Query: 145 IYGSKQSKTKGGLNAG 160
           + GS   + K G+  G
Sbjct: 147 LQGSPILEEKNGIKLG 162


>gi|399926003|ref|ZP_10783361.1| hypothetical protein MinjM_03150 [Myroides injenensis M09-0166]
          Length = 496

 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 66/136 (48%), Gaps = 6/136 (4%)

Query: 28  QRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPIL 87
           Q++    ++ E ++  + ++         E F   VP+  +E L+PYI R+++G+   + 
Sbjct: 30  QQKVFTSLIAEASNTVFGKDHHFQEIKSHEDFIKYVPIKDYEGLRPYIDRMVNGEADVLW 89

Query: 88  TGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRT---SYAFRNREFPIGKGKALQF 144
            G+P+  ++++SGTT G  K++P   E M   +   R    +Y     +     GK + F
Sbjct: 90  KGRPL-YLAKTSGTTSG-AKYIPLTKESMPYHISAARNAILAYIHETGKADFVDGKMI-F 146

Query: 145 IYGSKQSKTKGGLNAG 160
           + GS   + K GL  G
Sbjct: 147 LQGSPILEEKNGLKLG 162


>gi|307564824|ref|ZP_07627352.1| GH3 auxin-responsive promoter [Prevotella amnii CRIS 21A-A]
 gi|307346546|gb|EFN91855.1| GH3 auxin-responsive promoter [Prevotella amnii CRIS 21A-A]
          Length = 503

 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 1/100 (1%)

Query: 15  EEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPY 74
           +E +  T   E +Q+E +  +L    + EY +N   +     E F   +P+ T+E+L+  
Sbjct: 17  KELDQYTLHTEELQQEVMLYLLNRANNTEYGRNHLFSTINKYEEFTQNIPINTYEELKKD 76

Query: 75  IQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDE 114
           I R+  G+ + +  GK +   ++SSGTT  K KF+P   E
Sbjct: 77  IDRMRHGEENILWPGK-VKWYAKSSGTTNDKSKFIPITPE 115


>gi|354603832|ref|ZP_09021825.1| hypothetical protein HMPREF9450_00740 [Alistipes indistinctus YIT
           12060]
 gi|353348264|gb|EHB92536.1| hypothetical protein HMPREF9450_00740 [Alistipes indistinctus YIT
           12060]
          Length = 502

 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 26/99 (26%), Positives = 50/99 (50%), Gaps = 1/99 (1%)

Query: 16  EFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYI 75
           E +   +   R+Q++ L ++L +     + ++ G       E++ + VP+  ++    YI
Sbjct: 18  EIDFFMQHPARVQQQQLERLLTQAGGTVFGRDHGFGKIRTSEAYAAAVPVADYDSFSEYI 77

Query: 76  QRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDE 114
            R   G+ + +L    I   ++SSGTT  K KF+P +DE
Sbjct: 78  GRTRTGEQN-VLWPTEIKWFAKSSGTTSAKSKFIPVSDE 115


>gi|381186569|ref|ZP_09894139.1| putative auxin-regulated protein [Flavobacterium frigoris PS1]
 gi|379651413|gb|EIA09978.1| putative auxin-regulated protein [Flavobacterium frigoris PS1]
          Length = 495

 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 67/138 (48%), Gaps = 10/138 (7%)

Query: 28  QRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPIL 87
           Q+   R +++E    E+  +         E F   VP+  +EDL+ Y++++++G  + + 
Sbjct: 30  QQAVFRNLIKEAKQTEFGLDHKFAEIKTFEDFAKNVPIRDYEDLKNYVEKVVNGQENILW 89

Query: 88  TGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFR-----NREFPIGKGKAL 142
            GKP+   +++SGTT G  K++P   E M   ++  R +         N +F  GK   +
Sbjct: 90  KGKPL-YFAKTSGTTSG-AKYIPLTKESMPYHIEAARNAILHYINETGNADFVDGK---M 144

Query: 143 QFIYGSKQSKTKGGLNAG 160
            F+ GS   + K G+  G
Sbjct: 145 IFLQGSPILEEKHGIQFG 162


>gi|436838778|ref|YP_007323994.1| GH3 auxin-responsive promoter [Fibrella aestuarina BUZ 2]
 gi|384070191|emb|CCH03401.1| GH3 auxin-responsive promoter [Fibrella aestuarina BUZ 2]
          Length = 483

 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 64/137 (46%), Gaps = 8/137 (5%)

Query: 28  QRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPIL 87
           Q+  L+ +++  A+ ++ ++           F+  VP+  +E L+PYI+R+ DG    + 
Sbjct: 14  QQRWLQHLIKRAATTQFGRDHHFADIRTAADFRQAVPIRDYEALKPYIERVTDGQPDILW 73

Query: 88  TGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFPIGKG----KALQ 143
            GKP    +++SGTT G  K++P   E +   +   R +      E   G      K L 
Sbjct: 74  PGKP-AYFAKTSGTTSGT-KYIPLTAESLPNHINSARDALLCYVEE--TGNSAFLDKKLI 129

Query: 144 FIYGSKQSKTKGGLNAG 160
           F+ GS +   K G+  G
Sbjct: 130 FLSGSPELDQKAGIYTG 146


>gi|325859667|ref|ZP_08172797.1| GH3 auxin-responsive promoter [Prevotella denticola CRIS 18C-A]
 gi|325482593|gb|EGC85596.1| GH3 auxin-responsive promoter [Prevotella denticola CRIS 18C-A]
          Length = 503

 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 1/104 (0%)

Query: 15  EEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPY 74
           +E E    + E IQRE +  ++E     EY +    +     + F   +P+ T+E+L+  
Sbjct: 17  KELERYGTEGETIQREVMEYLVERAKDTEYGRKHLFSTIKTYDDFVQNIPVNTYEELKGD 76

Query: 75  IQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMET 118
           I R+  G+ + +  G  +   ++SSGTT  K KF+P + E ++T
Sbjct: 77  IDRMRHGERNVLWPGT-VRWYAKSSGTTNDKSKFIPVSHEGLQT 119


>gi|315224428|ref|ZP_07866258.1| GH3 auxin-responsive promoter family protein [Capnocytophaga
           ochracea F0287]
 gi|420159379|ref|ZP_14666183.1| GH3 auxin-responsive promoter [Capnocytophaga ochracea str. Holt
           25]
 gi|314945631|gb|EFS97650.1| GH3 auxin-responsive promoter family protein [Capnocytophaga
           ochracea F0287]
 gi|394762312|gb|EJF44566.1| GH3 auxin-responsive promoter [Capnocytophaga ochracea str. Holt
           25]
          Length = 495

 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 68/136 (50%), Gaps = 6/136 (4%)

Query: 28  QRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPIL 87
           Q++  + ++E+  +  + ++         + F + VP+  +E L+PYI R+++G+   + 
Sbjct: 29  QQKVFQSLIEQAKNTAFGRDHHFEEIQTYQDFVARVPIRDYEALRPYIDRVVEGEKDVLW 88

Query: 88  TGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTS---YAFRNREFPIGKGKALQF 144
            GKP+   +++SGTT G  K++P     M   +Q  R +   Y    ++    +GK + F
Sbjct: 89  EGKPL-YFAKTSGTTSG-AKYIPITKASMPFHIQAARDAILCYIHETKKADFVEGKMI-F 145

Query: 145 IYGSKQSKTKGGLNAG 160
           + GS     K G+  G
Sbjct: 146 LQGSPILGEKHGIKTG 161


>gi|149369722|ref|ZP_01889574.1| auxin-regulated protein [unidentified eubacterium SCB49]
 gi|149357149|gb|EDM45704.1| auxin-regulated protein [unidentified eubacterium SCB49]
          Length = 504

 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 76/174 (43%), Gaps = 6/174 (3%)

Query: 16  EFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYI 75
           + E   K    +Q+E L  +L    + E  +    +   +   F   VP+ T+E++Q  I
Sbjct: 20  QIELFLKYPNEVQQELLTSLLLRARATEIGKKYDFDSIKNYREFTERVPVTTYEEIQSDI 79

Query: 76  QRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME----TTLQIFRTSYAFRN 131
           +R   G+   I    PI   ++SSGTT  K KF+P + E +E       +     Y   N
Sbjct: 80  ERGRRGE-GNIFWPTPIKWFAKSSGTTNAKSKFIPVSTESLEGCHYAASKDLLCMYLNNN 138

Query: 132 REFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCS 185
               +  GK+L+ + GSK+   + G + G  +  +  +  F AE  +  S   S
Sbjct: 139 ENAQLFTGKSLR-LGGSKELYQENGTSYGDLSAILIDNMPFWAEYSSTPSNEIS 191


>gi|163786485|ref|ZP_02180933.1| putative auxin-regulated protein [Flavobacteriales bacterium ALC-1]
 gi|159878345|gb|EDP72401.1| putative auxin-regulated protein [Flavobacteriales bacterium ALC-1]
          Length = 505

 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 75/176 (42%), Gaps = 6/176 (3%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
             + E   K    +Q E L  +L+     E  +            F   VP+V +E +QP
Sbjct: 18  FHQIELFLKYPNEVQNELLFSLLKIAKDTEVGKQYDFASIKTYREFDKRVPVVNYETIQP 77

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME----TTLQIFRTSYAF 129
            I+R  +G+ + I    PI   ++SSGTT  K KF+P + + +E       +     Y  
Sbjct: 78  IIERSRNGEQN-IFWPSPIRWFAKSSGTTNAKSKFIPVSTDSLEDCHYAAGKDLLCMYLN 136

Query: 130 RNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCS 185
            N +  +  GK+L+ + GSK+   + G   G  +  +  +  F AE  +  S   S
Sbjct: 137 NNEDSQLFTGKSLR-LGGSKELYKENGTVFGDLSAILIDNMPFWAEYSSTPSNRVS 191


>gi|421526321|ref|ZP_15972929.1| GH3 auxin-responsive promoter [Fusobacterium nucleatum ChDC F128]
 gi|402257399|gb|EJU07873.1| GH3 auxin-responsive promoter [Fusobacterium nucleatum ChDC F128]
          Length = 515

 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 2/89 (2%)

Query: 27  IQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPI 86
           IQ   LR+IL+ N    Y +    +     E+F+  VPL T+ED   YI++I  G+   I
Sbjct: 34  IQENKLREILKNNKDTLYGKKYNFDKIKTIENFQKEVPLTTYEDYLLYIEKIKIGE-ENI 92

Query: 87  LTGKPITTISRSSGTTQGKPKFLPFNDEL 115
           LT + +     +SG+T    K +P+ D L
Sbjct: 93  LTHEKVKMFELTSGSTSA-SKLIPYTDSL 120


>gi|420150288|ref|ZP_14657448.1| GH3 auxin-responsive promoter [Capnocytophaga sp. oral taxon 335
           str. F0486]
 gi|394752347|gb|EJF36049.1| GH3 auxin-responsive promoter [Capnocytophaga sp. oral taxon 335
           str. F0486]
          Length = 495

 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 6/107 (5%)

Query: 57  ESFKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELM 116
           E F + VP+  +E L+PYI R+++G+   +  GKP+   +++SGTT G  K++P     M
Sbjct: 58  EDFVARVPIRDYEALRPYIDRVVEGEKDVLWKGKPL-YFAKTSGTTSG-AKYIPITKASM 115

Query: 117 ETTLQIFRTS---YAFRNREFPIGKGKALQFIYGSKQSKTKGGLNAG 160
              +Q  R +   Y    ++    +GK + F+ GS     K G+  G
Sbjct: 116 PFHIQAARDAILCYIHETKKADFVEGKMI-FLQGSPILGEKHGIKTG 161


>gi|325268358|ref|ZP_08134991.1| GH3 auxin-responsive promoter family protein [Prevotella
           multiformis DSM 16608]
 gi|324989500|gb|EGC21450.1| GH3 auxin-responsive promoter family protein [Prevotella
           multiformis DSM 16608]
          Length = 503

 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 1/104 (0%)

Query: 15  EEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPY 74
           +E E    + E IQRE +  ++E     EY +    +     + F   +P+ T+E+L+  
Sbjct: 17  KELERYGTEGETIQREVMEYLVERAKDTEYGRKHLFSTIRTYDDFVQNIPVNTYEELKGD 76

Query: 75  IQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMET 118
           I R+  G+ + +  G  +   ++SSGTT  K KF+P + E ++T
Sbjct: 77  IDRMRHGERNVLWPGT-VRWYAKSSGTTNDKSKFIPVSHEGLQT 119


>gi|327312856|ref|YP_004328293.1| GH3 auxin-responsive promoter [Prevotella denticola F0289]
 gi|326944410|gb|AEA20295.1| GH3 auxin-responsive promoter [Prevotella denticola F0289]
          Length = 503

 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 1/104 (0%)

Query: 15  EEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPY 74
           +E E    + E IQRE +  ++E     EY +    +     + F   +P+ T+E+L+  
Sbjct: 17  KELERYGTEGETIQREVMEYLVERAKDTEYGRKHLFSTIRTYDDFVQNIPVNTYEELKGD 76

Query: 75  IQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMET 118
           I R+  G+ + +  G  +   ++SSGTT  K KF+P + E ++T
Sbjct: 77  IDRMRHGERNVLWPGT-VRWYAKSSGTTNDKSKFIPVSHEGLQT 119


>gi|261749588|ref|YP_003257274.1| auxin-regulated protein [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
 gi|261497681|gb|ACX84131.1| putative auxin-regulated protein [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
          Length = 501

 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 51/97 (52%), Gaps = 1/97 (1%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           I+  E+I ++   IQ + + +++    + E+ +  G       + F   +P+  + DLQ 
Sbjct: 17  IKRIESIIRNPIEIQYKLIHQLIAYAKNTEFGKKYGFCDIKKYQQFSERIPICKYPDLQS 76

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLP 110
            I+RI  G+ + +  GK +   +RSSGTT  K K++P
Sbjct: 77  IIERIRKGEKNLLWPGK-VKWFARSSGTTSTKSKYIP 112


>gi|302188355|ref|ZP_07265028.1| auxin-responsive GH3-related protein [Pseudomonas syringae pv.
           syringae 642]
          Length = 538

 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 2/103 (1%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           ++ ++++ +  E+ Q+  L ++L  N    + Q     G  D   F+  +P+ T+  LQP
Sbjct: 23  LDHWQSLFEQPEQSQQRLLLRMLSANRDCAFGQAHDFAGIRDAAEFRQRIPIHTYAQLQP 82

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELM 116
           +I+R     + PILT  P     RSSG +  + K +P+    +
Sbjct: 83  WIERAQHEQV-PILTASPPLFFERSSGNSALQ-KHIPYTQHFL 123


>gi|85818527|gb|EAQ39687.1| GH3 auxin-responsive promoter [Dokdonia donghaensis MED134]
          Length = 497

 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 10/138 (7%)

Query: 30  ETLRKILEENASAEYLQNLGLNGRTDP----ESFKSCVPLVTHEDLQPYIQRIIDGDISP 85
           ET +K+ E+   A    N G +   D     + F   VP+  +E L+PY+ +++ G+   
Sbjct: 28  ETQQKVFEKLIDAAQYTNFGNDHHFDKIKTHQDFVKHVPIRDYEALKPYVDKMVAGEADV 87

Query: 86  ILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRT---SYAFRNREFPIGKGKAL 142
           +  GKP+   +++SGTT G  K++P   + M+T     R    SY           GK +
Sbjct: 88  LWPGKPL-YFAKTSGTTSG-VKYIPLTKDSMKTHPNSARNAILSYIAETGNTSFVDGKMI 145

Query: 143 QFIYGSKQSKTKGGLNAG 160
            F+ GS     K G+  G
Sbjct: 146 -FLQGSPIMTEKNGIKLG 162


>gi|345868196|ref|ZP_08820190.1| GH3 auxin-responsive promoter family protein [Bizionia
           argentinensis JUB59]
 gi|344047410|gb|EGV43040.1| GH3 auxin-responsive promoter family protein [Bizionia
           argentinensis JUB59]
          Length = 500

 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 64/138 (46%), Gaps = 10/138 (7%)

Query: 28  QRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPIL 87
           Q    + ++ + AS  +  +           +   VP+  +EDL+PY+ R++ G+   + 
Sbjct: 31  QERVFQDLINDAASTAFGVDHEFASIKSHADYVKRVPIRDYEDLKPYVDRVVAGESDVLW 90

Query: 88  TGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRT---SYAFR--NREFPIGKGKAL 142
            GKP+   +++SGTT G  K++P   E M T +   R    SY     N +F  GK   +
Sbjct: 91  KGKPL-YFAKTSGTTSG-AKYIPLTKESMPTHVAAARNAILSYIHETGNAKFVSGK---M 145

Query: 143 QFIYGSKQSKTKGGLNAG 160
            F+ GS     + G+  G
Sbjct: 146 IFLQGSPVLTEQNGIQLG 163


>gi|189501890|ref|YP_001957607.1| hypothetical protein Aasi_0468 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|189497331|gb|ACE05878.1| hypothetical protein Aasi_0468 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 502

 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 41/170 (24%), Positives = 73/170 (42%), Gaps = 6/170 (3%)

Query: 22  KDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDG 81
           K+  RIQ+    K++++     + +    N     E FK  VP+  +ED   YI++I  G
Sbjct: 24  KNPVRIQQNIFHKLIQQAKHTLFGRAHNFNSIRTHEDFKQYVPIRAYEDFTGYIEQIKGG 83

Query: 82  DISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFPIGK--G 139
           +   +  G PI   +++SGTT G  K +P   E ++  +   R +  +   E        
Sbjct: 84  ESDVLWPGSPI-YFAKTSGTTGGD-KHIPITKESIKHHIVNARNALLYYVNETSKTDFLK 141

Query: 140 KALQFIYGSKQSKTKGGLNAG--TATTNVYRSSTFKAEMKAMQSQCCSPD 187
           + + F+ GS Q  T+  +  G  +   N +  S  +       +  C PD
Sbjct: 142 RKMIFLSGSPQLTTEANILTGRLSGIVNHHVPSYLRGSQLPSYATNCIPD 191


>gi|298206721|ref|YP_003714900.1| plant auxin-regulated protein [Croceibacter atlanticus HTCC2559]
 gi|83849352|gb|EAP87220.1| putative plant auxin-regulated protein [Croceibacter atlanticus
           HTCC2559]
          Length = 484

 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 1/100 (1%)

Query: 18  ETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQR 77
           E   K    +Q E L ++L +    E  +  G +  T+ ++F   VP+ ++E     I+R
Sbjct: 2   ELFIKYPNEVQHELLHQLLYKAKDTEMGKTYGFDTITNYKTFSERVPIQSYEQYTERIER 61

Query: 78  IIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
              G+ + I    PI   ++SSGTT  K KF+P +++ +E
Sbjct: 62  SRSGE-NNIFWPTPIKWFAKSSGTTNAKSKFIPVSEDSLE 100


>gi|332291465|ref|YP_004430074.1| GH3 auxin-responsive promoter [Krokinobacter sp. 4H-3-7-5]
 gi|332169551|gb|AEE18806.1| GH3 auxin-responsive promoter [Krokinobacter sp. 4H-3-7-5]
          Length = 503

 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 74/176 (42%), Gaps = 6/176 (3%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           I + E   K    +Q E   K++E+    E  +            F   +P+ ++E+ Q 
Sbjct: 18  IHQMELFMKYPSEVQEELRTKLIEKAKDTEIGRAYDFKSIKSYREFADRIPVTSYEENQE 77

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMET----TLQIFRTSYAF 129
           YI+R   G+ + I+   PI   ++SSGTT  + K++P + E +E       +     Y  
Sbjct: 78  YIERSRKGETN-IMWPTPIKWFAQSSGTTNARSKYIPVSPESLENCHYAASKDLLCMYLN 136

Query: 130 RNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCS 185
            N    +  GK L+ + GSKQ     G   G  +  +  +  F AE  +  +   S
Sbjct: 137 NNEGSQLFSGKGLR-LGGSKQLYQDNGTVYGDLSAILIDNMPFWAEFSSTPTNGVS 191


>gi|345514067|ref|ZP_08793581.1| hypothetical protein BSEG_02101 [Bacteroides dorei 5_1_36/D4]
 gi|423230763|ref|ZP_17217167.1| hypothetical protein HMPREF1063_02987 [Bacteroides dorei
           CL02T00C15]
 gi|423244474|ref|ZP_17225549.1| hypothetical protein HMPREF1064_01755 [Bacteroides dorei
           CL02T12C06]
 gi|345456062|gb|EEO45960.2| hypothetical protein BSEG_02101 [Bacteroides dorei 5_1_36/D4]
 gi|392630413|gb|EIY24406.1| hypothetical protein HMPREF1063_02987 [Bacteroides dorei
           CL02T00C15]
 gi|392642048|gb|EIY35820.1| hypothetical protein HMPREF1064_01755 [Bacteroides dorei
           CL02T12C06]
          Length = 512

 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 50/87 (57%), Gaps = 2/87 (2%)

Query: 24  AERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDI 83
           AE +Q +   +++ + A+ E+    G       + F+  VP+ T+E+++PY++R+  G+ 
Sbjct: 36  AEALQHKVFCRLINDAANTEWGLKYGYKDIKRYQDFQR-VPIQTYEEIKPYVERMRHGEK 94

Query: 84  SPILTGKPITTISRSSGTTQGKPKFLP 110
             +  G+ +   ++SSGTT  K KF+P
Sbjct: 95  DILWRGE-VQWFAKSSGTTNDKSKFIP 120


>gi|212692263|ref|ZP_03300391.1| hypothetical protein BACDOR_01759 [Bacteroides dorei DSM 17855]
 gi|237711468|ref|ZP_04541949.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|265752873|ref|ZP_06088442.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
 gi|423240611|ref|ZP_17221725.1| hypothetical protein HMPREF1065_02348 [Bacteroides dorei
           CL03T12C01]
 gi|212665140|gb|EEB25712.1| GH3 auxin-responsive promoter [Bacteroides dorei DSM 17855]
 gi|229454163|gb|EEO59884.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|263236059|gb|EEZ21554.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
 gi|392643573|gb|EIY37322.1| hypothetical protein HMPREF1065_02348 [Bacteroides dorei
           CL03T12C01]
          Length = 501

 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 50/87 (57%), Gaps = 2/87 (2%)

Query: 24  AERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDI 83
           AE +Q +   +++ + A+ E+    G       + F+  VP+ T+E+++PY++R+  G+ 
Sbjct: 25  AEALQHKVFCRLINDAANTEWGLKYGYKDIKRYQDFQR-VPIQTYEEIKPYVERMRHGEK 83

Query: 84  SPILTGKPITTISRSSGTTQGKPKFLP 110
             +  G+ +   ++SSGTT  K KF+P
Sbjct: 84  DILWRGE-VQWFAKSSGTTNDKSKFIP 109


>gi|319953650|ref|YP_004164917.1| gh3 auxin-responsive promoter [Cellulophaga algicola DSM 14237]
 gi|319422310|gb|ADV49419.1| GH3 auxin-responsive promoter [Cellulophaga algicola DSM 14237]
          Length = 504

 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 77/174 (44%), Gaps = 6/174 (3%)

Query: 16  EFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYI 75
           + E   K  E +Q+E L ++L      E  +           +F S VP+ ++E+++P I
Sbjct: 20  QIELFLKYPEEVQQEVLMQLLAFAKDTEIGRMHEFGSILSYRTFASRVPVTSYEEMEPNI 79

Query: 76  QRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME----TTLQIFRTSYAFRN 131
           +R   G+   I     I   ++SSGTT  K KF+P + E +E     + +     Y   N
Sbjct: 80  ERTRRGE-QNIFWPTSIKWFAKSSGTTNAKSKFIPVSTEALEDCHYKSGKDLLCLYLNNN 138

Query: 132 REFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCS 185
               +  GK+L+ + GSK+     G   G  +  +  +  F AE+ +  S   S
Sbjct: 139 ENSQLFTGKSLR-LGGSKELYEDNGTFFGDLSAILIDNMPFWAELSSTPSNKVS 191


>gi|298207165|ref|YP_003715344.1| auxin-regulated protein [Croceibacter atlanticus HTCC2559]
 gi|83849800|gb|EAP87668.1| putative auxin-regulated protein [Croceibacter atlanticus HTCC2559]
          Length = 497

 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 35/140 (25%), Positives = 64/140 (45%), Gaps = 10/140 (7%)

Query: 26  RIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISP 85
           + Q   LR+++      ++ ++       D   F   VP+  +EDL+PY++  + G    
Sbjct: 28  KTQERVLRELINGAKDTKFGKDHNFVIIKDHTDFAKYVPVRDYEDLKPYVEEAVAGKEDI 87

Query: 86  ILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSY-----AFRNREFPIGKGK 140
           +  GKP+   +++SGTT G  K++P   E M   +   R +         N +F  GK  
Sbjct: 88  LWKGKPL-YFAKTSGTTSG-SKYIPLTKESMPGHINAARNAILCYIAETNNADFVDGK-- 143

Query: 141 ALQFIYGSKQSKTKGGLNAG 160
            + F+ GS +   + G+  G
Sbjct: 144 -MIFLQGSPELNEQNGIKLG 162


>gi|443243361|ref|YP_007376586.1| auxin regulated protein [Nonlabens dokdonensis DSW-6]
 gi|442800760|gb|AGC76565.1| auxin regulated protein [Nonlabens dokdonensis DSW-6]
          Length = 500

 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 66/138 (47%), Gaps = 10/138 (7%)

Query: 28  QRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPIL 87
           Q +  + +L+   +  + +    +       F   VP+  +E L+P++ R++ G+   + 
Sbjct: 30  QDKVFKYLLKTAGNTAFAKAHSFSSIKTHHDFIDQVPVRDYEQLRPFVDRVVAGEEDILW 89

Query: 88  TGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTS-----YAFRNREFPIGKGKAL 142
            GKP+   +++SGTT G  K++P   E M   ++  R +     +   N +F  GK   +
Sbjct: 90  PGKPL-YFAKTSGTTSG-AKYIPITKESMPEHVKAARNAILSYIHETGNSKFVDGK---M 144

Query: 143 QFIYGSKQSKTKGGLNAG 160
            F+ GS   +TK G+  G
Sbjct: 145 IFLQGSPDMETKNGIQLG 162


>gi|393778939|ref|ZP_10367197.1| GH3 auxin-responsive promoter [Capnocytophaga sp. oral taxon 412
           str. F0487]
 gi|392611158|gb|EIW93906.1| GH3 auxin-responsive promoter [Capnocytophaga sp. oral taxon 412
           str. F0487]
          Length = 495

 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 55/107 (51%), Gaps = 6/107 (5%)

Query: 57  ESFKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELM 116
           E F + VP+  +E L+PYI R++ G+   +  GKP+   +++SGTT G  K++P     M
Sbjct: 58  EDFVARVPIRDYEALRPYIDRVVGGEKDVLWKGKPL-YFAKTSGTTSG-AKYIPITKASM 115

Query: 117 ETTLQIFRTS---YAFRNREFPIGKGKALQFIYGSKQSKTKGGLNAG 160
              +Q  R +   Y    ++    +GK + F+ GS     K G+  G
Sbjct: 116 PFHIQAARDAILCYIHETKKADFVEGKMI-FLQGSPILGEKHGIKTG 161


>gi|326790412|ref|YP_004308233.1| GH3 auxin-responsive promoter [Clostridium lentocellum DSM 5427]
 gi|326541176|gb|ADZ83035.1| GH3 auxin-responsive promoter [Clostridium lentocellum DSM 5427]
          Length = 518

 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 30/106 (28%), Positives = 55/106 (51%), Gaps = 7/106 (6%)

Query: 17  FETITKD-----AERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDL 71
           +ET  +D      + +Q+E L  +LE+ A  EY +     G    + +   VPL  +E  
Sbjct: 21  YETFMEDFSLEKIKDVQQEKLLTLLEQQAETEYGKKYDFKGIKGIKEYGEKVPLSDYETY 80

Query: 72  QPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
           +PYI+R ++ + +P+LT + +     +SG+T+   K +P+   L E
Sbjct: 81  RPYIER-LEQEKAPLLTSEVLIAFEPTSGSTKAY-KLIPYTKTLKE 124


>gi|443643881|ref|ZP_21127731.1| Auxin-responsive GH3-related protein [Pseudomonas syringae pv.
           syringae B64]
 gi|443283898|gb|ELS42903.1| Auxin-responsive GH3-related protein [Pseudomonas syringae pv.
           syringae B64]
          Length = 538

 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 41/170 (24%), Positives = 69/170 (40%), Gaps = 28/170 (16%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           ++ ++ + +  E  Q+  L ++L  +    + Q     G  D E F+  VP+  +  LQP
Sbjct: 23  LDHWQRLFEKPEESQQRLLLRMLSASRYCAFGQAHDFAGIRDSEEFRKRVPIHIYAQLQP 82

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDE------------LMETTLQ 121
           +I+R    +  PILT  P     RSSG +  + K +P+  E            L +   Q
Sbjct: 83  WIER-AQHEQGPILTASPPLFFERSSGNSTVQ-KHIPYTQEFLGQLQGSLTVWLADMYRQ 140

Query: 122 IFRTSY--------------AFRNREFPIGKGKALQFIYGSKQSKTKGGL 157
           +   S+              A    + PIG    LQ++ GS  +   G L
Sbjct: 141 VPEISHGSGYWSMSPPLQQPAMTANDIPIGSASDLQYLQGSAIAGLAGTL 190


>gi|399030193|ref|ZP_10730699.1| coenzyme F390 synthetase [Flavobacterium sp. CF136]
 gi|398071699|gb|EJL62946.1| coenzyme F390 synthetase [Flavobacterium sp. CF136]
          Length = 494

 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 69/140 (49%), Gaps = 14/140 (10%)

Query: 30  ETLRKILEENASAEYLQNLGLNGRTDP----ESFKSCVPLVTHEDLQPYIQRIIDGDISP 85
           ET +KI +    +      G++   D     E F+  VP+  +EDL+ YI+++  G+ + 
Sbjct: 28  ETQQKIFKSLIKSAKDTEFGIDHHFDKIKTFEDFQKNVPIRDYEDLKTYIEKVKSGEENI 87

Query: 86  ILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTS-----YAFRNREFPIGKGK 140
           +  G+P+   +++SGTT G  K++P   E M T ++  R +     +   N +F  GK  
Sbjct: 88  LWKGRPL-YFAKTSGTTSG-AKYIPLTKESMPTHIKASRNAILHYIHETGNADFVNGK-- 143

Query: 141 ALQFIYGSKQSKTKGGLNAG 160
            + F+ GS     K G+  G
Sbjct: 144 -MIFLQGSPILTEKFGIKFG 162


>gi|357421167|ref|YP_004928616.1| putative auxin-regulated protein [Blattabacterium sp. (Mastotermes
           darwiniensis) str. MADAR]
 gi|354803677|gb|AER40791.1| putative auxin-regulated protein [Blattabacterium sp. (Mastotermes
           darwiniensis) str. MADAR]
          Length = 501

 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 26/101 (25%), Positives = 52/101 (51%), Gaps = 1/101 (0%)

Query: 10  VDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHE 69
           + + I++ E I ++   IQ + + K++      E+ +  G       + F   +P+  + 
Sbjct: 13  IKKRIKKIEYIIQNPIDIQHQLIHKMIVYARDTEFGKKYGFKDIKKYKQFSERIPICNYM 72

Query: 70  DLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLP 110
           DL+P I RI  G+ + +  GK +   ++SSGTT  + K++P
Sbjct: 73  DLKPLIGRIRRGEKNVLWPGK-VKWFAKSSGTTNTRSKYIP 112


>gi|325299466|ref|YP_004259383.1| GH3 auxin-responsive promoter [Bacteroides salanitronis DSM 18170]
 gi|324319019|gb|ADY36910.1| GH3 auxin-responsive promoter [Bacteroides salanitronis DSM 18170]
          Length = 506

 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 52/100 (52%), Gaps = 2/100 (2%)

Query: 15  EEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPY 74
           +E +T T  AE IQ +  RK+  + +  E+ +            F+  VP+  ++D++ Y
Sbjct: 16  KEIDTYTTQAEAIQEKVFRKLTAQASDTEWGKKYDFAHIRSYADFQR-VPIQQYDDIKGY 74

Query: 75  IQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDE 114
           + R+  G+   +  G+ +   ++SSGTT  K KF+P + +
Sbjct: 75  VDRMRHGEKDVLWPGR-VIWYAKSSGTTSDKSKFIPVSKD 113


>gi|359404903|ref|ZP_09197708.1| GH3 auxin-responsive promoter [Prevotella stercorea DSM 18206]
 gi|357559853|gb|EHJ41282.1| GH3 auxin-responsive promoter [Prevotella stercorea DSM 18206]
          Length = 501

 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 1/90 (1%)

Query: 25  ERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDIS 84
           E +Q   L+ +L   A+ EY +N         + F   VP+ T+E+L+  I R+  G+  
Sbjct: 26  EALQHRMLQHLLHTAANTEYGRNHLFATTKGYDDFVRNVPVNTYEELKADIDRMRHGEAD 85

Query: 85  PILTGKPITTISRSSGTTQGKPKFLPFNDE 114
            +  GK +   ++SSGTT  K KF+P + E
Sbjct: 86  VLWPGK-VKWYAKSSGTTNDKSKFIPVSAE 114


>gi|295132669|ref|YP_003583345.1| hypothetical protein ZPR_0799 [Zunongwangia profunda SM-A87]
 gi|294980684|gb|ADF51149.1| conserved hypothetical protein [Zunongwangia profunda SM-A87]
          Length = 503

 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 51/212 (24%), Positives = 92/212 (43%), Gaps = 17/212 (8%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           I + E   K    +Q E L+ ++ +  + E  +    +   +   F + VP+  +E+   
Sbjct: 18  IHQMELFIKYPNEVQEELLKGLINKARNTEIGRKYNFSEIKNYRDFATRVPVHCYENYYE 77

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME----TTLQIFRTSYAF 129
            I+R   G+ + I    PI   ++SSGTT  K KF+P +++ +E       +     Y  
Sbjct: 78  AIERSRQGETN-IFWPTPIKWFAKSSGTTNAKSKFIPVSEDSLEDCHYAAGKDLLCIYLN 136

Query: 130 RNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEV 189
            N    +  GK+L+ + GSK+   + G + G  +  +  +  F AE  +  S     +EV
Sbjct: 137 NNPGSQLFTGKSLR-LGGSKEIYKENGTSFGDLSAILIDNMPFWAEFSSTPS-----NEV 190

Query: 190 IFGPDFHQSLYCHLLCGLIFREEIQLVFSTFA 221
               D+   +      G I RE IQ   ++ A
Sbjct: 191 SLMHDWETKM------GAIVRETIQENVTSLA 216


>gi|282858934|ref|ZP_06268074.1| GH3 auxin-responsive promoter [Prevotella bivia JCVIHMP010]
 gi|424900012|ref|ZP_18323554.1| GH3 auxin-responsive promoter-binding protein [Prevotella bivia DSM
           20514]
 gi|282588316|gb|EFB93481.1| GH3 auxin-responsive promoter [Prevotella bivia JCVIHMP010]
 gi|388592212|gb|EIM32451.1| GH3 auxin-responsive promoter-binding protein [Prevotella bivia DSM
           20514]
          Length = 503

 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 53/104 (50%), Gaps = 1/104 (0%)

Query: 15  EEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPY 74
           +E +  T  AE +Q E ++ +L    + EY ++           F   VP+ T+E+L+  
Sbjct: 17  KELDQYTHHAEELQHEVMQYLLGRAKNTEYGRSHLFAAIKTYNDFTQNVPVNTYEELKKD 76

Query: 75  IQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMET 118
           I R+  G+ + +  G+ +   ++SSGTT  K KF+P   E ++ 
Sbjct: 77  IDRMRHGEENILWPGQ-VKWYAKSSGTTNDKSKFIPITSEGLQN 119


>gi|213961704|ref|ZP_03389970.1| GH3 auxin-responsive promoter family protein [Capnocytophaga
           sputigena Capno]
 gi|213955493|gb|EEB66809.1| GH3 auxin-responsive promoter family protein [Capnocytophaga
           sputigena Capno]
          Length = 500

 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 67/136 (49%), Gaps = 6/136 (4%)

Query: 28  QRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPIL 87
           Q++  + ++E+  +  + ++         + F   VP+  +E L+PYI R+++G+   + 
Sbjct: 29  QQKVFQSLIEQAKNTAFGRDHHFEEIKTYQDFVVRVPIRDYEALRPYIDRVVEGEKDVLW 88

Query: 88  TGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTS---YAFRNREFPIGKGKALQF 144
            GKP+   +++SGTT G  K++P     M   +Q  R +   Y    ++    +GK + F
Sbjct: 89  KGKPL-YFAKTSGTTSG-AKYIPITKASMPFHIQAARDAILCYINETKKADFVEGKMI-F 145

Query: 145 IYGSKQSKTKGGLNAG 160
           + GS     K G+  G
Sbjct: 146 LQGSPILGEKNGIKTG 161


>gi|392591841|gb|EIW81168.1| hypothetical protein CONPUDRAFT_82204 [Coniophora puteana
           RWD-64-598 SS2]
          Length = 607

 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 79/366 (21%), Positives = 135/366 (36%), Gaps = 49/366 (13%)

Query: 59  FKSCVPLVTHEDLQPYIQRIIDGDI------SPILTGKPITTISRSSGTTQGKPKFLPFN 112
           F   V L  + D  P++ R    D+      + +  G P   I+ SSGT+ GK K  P  
Sbjct: 80  FSKTVELSEYNDYLPFVDRFFQKDVKVADVENLMAPGLPYF-IAHSSGTSGGKTKHFPKY 138

Query: 113 DELMETTLQIFRTSYAFRNREFPIGKGKALQFIYGSK---QSKTKGGLNAGTATTNVYRS 169
                 +    +T  A  N     G    + +  G     +   + G  A   T  +  S
Sbjct: 139 QHPKHMSTSTAQT-MAASNPTSKTGGKNCVVYSLGYMDVVKPLDENGEVAKHITVCLMSS 197

Query: 170 STFKAEMKAMQSQCC-----------SPDEVIFGPDFHQSLYCHLLCGLIFR--EEIQLV 216
            T +      Q +             +P    F P++   ++ H L  L  R  E I  +
Sbjct: 198 GTIRMHTGMDQPRDAFYQKMKVPVNTAPLGASFIPNYKSFMFIHGLFALAERNTELINTM 257

Query: 217 FSTFAHSLVHAFRTFELV----WEELCDDIREGVLSSRITVPSIRAAMSKILKPNPELAD 272
           FST        FR F       ++E+ D I +G L     +  ++  + +    NPE A 
Sbjct: 258 FSTL-------FRDFYTALIERFDEVVDCIEKGTLPDMDGIAHVKDNLMQYWSANPERAQ 310

Query: 273 LIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRHYAG-DLPLMSADYGSSE 331
            + +     +   G +  +FP    +  I +G     L +++H+ G D+ L +     SE
Sbjct: 311 EL-RTIGNDTTQPGWLKRVFPKLAIVVAISSGPFSSVLPEMKHHMGPDVQLRTLGINCSE 369

Query: 332 GWIGANVNPSLPPELATFAVLPNIGYFEF-IPQRLGNLESQVLCIEPKPVGLTEVKVGEE 390
            ++    +   P           I Y +  +P+    L S             EV+VG++
Sbjct: 370 AFLALAYDSKDPSLYKVVGTDEIIEYLDIDLPENAKGLLSA-----------WEVQVGKK 418

Query: 391 YEIIVT 396
           YE+I+T
Sbjct: 419 YEVILT 424


>gi|424843079|ref|ZP_18267704.1| GH3 auxin-responsive promoter-binding protein [Saprospira grandis
           DSM 2844]
 gi|395321277|gb|EJF54198.1| GH3 auxin-responsive promoter-binding protein [Saprospira grandis
           DSM 2844]
          Length = 503

 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 46/88 (52%), Gaps = 1/88 (1%)

Query: 27  IQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPI 86
           +Q + L+ ++      ++ +  G       + F+  +PL  +E L+PYIQ+++ G    +
Sbjct: 29  VQEQWLQHLISRAKHTQWGKEFGFQHIKTHKDFQKQLPLSDYETLKPYIQQMMLGQKDVL 88

Query: 87  LTGKPITTISRSSGTTQGKPKFLPFNDE 114
             G+     S+SSGTT  K K+LP + E
Sbjct: 89  WPGQ-TKWFSKSSGTTNDKSKYLPVSME 115


>gi|189462277|ref|ZP_03011062.1| hypothetical protein BACCOP_02963 [Bacteroides coprocola DSM 17136]
 gi|189431016|gb|EDV00001.1| GH3 auxin-responsive promoter [Bacteroides coprocola DSM 17136]
          Length = 501

 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 37/175 (21%), Positives = 77/175 (44%), Gaps = 18/175 (10%)

Query: 15  EEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPY 74
           +E +   K+ E IQ    RK+++  A+ E+ +            F+  VP+  ++D++ Y
Sbjct: 16  KEIDRYAKETEAIQEHVFRKLIQTAAATEWGKKYNYANIRTYTDFQR-VPIQQYDDVKGY 74

Query: 75  IQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREF 134
           + R+  G+ + +  G+ +   ++SSGTT  K KF+P + +               R+  +
Sbjct: 75  VDRMRHGEKNILWPGQ-VVWYAKSSGTTNDKSKFIPVSKD-------------GLRHIHY 120

Query: 135 PIGKGKALQFIYGSKQSK---TKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSP 186
             G      ++  + QS     KG +  G+ + N     +   ++ A+  Q  +P
Sbjct: 121 KGGTDAVALYLRSNPQSNFFSGKGLILGGSHSPNYNLKDSLVGDLSAILIQNINP 175


>gi|373500950|ref|ZP_09591320.1| hypothetical protein HMPREF9140_01438 [Prevotella micans F0438]
 gi|371950987|gb|EHO68836.1| hypothetical protein HMPREF9140_01438 [Prevotella micans F0438]
          Length = 509

 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 1/92 (1%)

Query: 23  DAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGD 82
           +AE++Q E ++ +LE+    EY +    +     + F   +P+ T+E+L+  I+R+  G+
Sbjct: 25  EAEKLQNEAMKYLLEKAKYTEYGRKHLFSTIRKYDDFVQNIPVNTYEELKADIERMRHGE 84

Query: 83  ISPILTGKPITTISRSSGTTQGKPKFLPFNDE 114
            + +  G+     ++SSGTT  K KF+P   E
Sbjct: 85  RNVLWPGQ-TKWYAKSSGTTNDKSKFIPITSE 115


>gi|325955359|ref|YP_004239019.1| GH3 auxin-responsive promoter [Weeksella virosa DSM 16922]
 gi|323437977|gb|ADX68441.1| GH3 auxin-responsive promoter [Weeksella virosa DSM 16922]
          Length = 500

 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 66/136 (48%), Gaps = 6/136 (4%)

Query: 28  QRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPIL 87
           Q +T   +L+   +  + ++         E FK+ VP+  +E L+ Y   IIDG+ +   
Sbjct: 28  QDKTFHYLLKTAQNTRFGKDHDFASIQSYEDFKARVPVRDYEGLKNYFDAIIDGEENVTW 87

Query: 88  TGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRT---SYAFRNREFPIGKGKALQF 144
            GKP+  ++++SGTT G  K +P   E + T ++  R    +Y + +       GK + F
Sbjct: 88  PGKPL-YLAKTSGTTSG-AKAIPLTKESIPTHIKSARNALLAYIYESGNASFLNGKMI-F 144

Query: 145 IYGSKQSKTKGGLNAG 160
           + G+ +   K G+  G
Sbjct: 145 LQGNPELTKKNGIQTG 160


>gi|86140702|ref|ZP_01059261.1| putative auxin-regulated protein [Leeuwenhoekiella blandensis
           MED217]
 gi|85832644|gb|EAQ51093.1| putative auxin-regulated protein [Leeuwenhoekiella blandensis
           MED217]
          Length = 507

 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 72/169 (42%), Gaps = 6/169 (3%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           I + E   K    +Q E L K++ +  + E  +  G         F   VP+  +E    
Sbjct: 18  IHQMELFLKYPHEVQNELLLKLVHKAKNTEIGKKYGFKDIRSYNDFAQQVPITNYEASHE 77

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME----TTLQIFRTSYAF 129
            I+R   G+ S I    P+   ++SSGTT  K K++P + E +E       +     Y  
Sbjct: 78  MIERARRGE-SNIFWPSPVKLFAQSSGTTNAKSKYIPVSPEALEDCHYAASKDLLCVYLN 136

Query: 130 RNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKA 178
            N +  +  GK+L+ + GSK+     G + G  +  +  +  F AE  +
Sbjct: 137 NNPDSQLFTGKSLR-LGGSKKLYESNGTSYGDLSAILIDNMPFWAEFSS 184


>gi|422339114|ref|ZP_16420073.1| auxin-responsive GH3-related protein [Fusobacterium nucleatum
           subsp. polymorphum F0401]
 gi|355371336|gb|EHG18688.1| auxin-responsive GH3-related protein [Fusobacterium nucleatum
           subsp. polymorphum F0401]
          Length = 515

 Score = 47.8 bits (112), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 2/89 (2%)

Query: 27  IQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPI 86
           IQ   L++IL+ N    Y +    +     + F+  VPL  +ED  PYI++I  G+   I
Sbjct: 34  IQENKLKEILKNNKDTLYGKKYNFDKIKTIQEFQKEVPLTKYEDYLPYIEKIKMGE-ENI 92

Query: 87  LTGKPITTISRSSGTTQGKPKFLPFNDEL 115
           LT + +     +SG+T    K +P+ D L
Sbjct: 93  LTHEKVKMFELTSGSTSA-SKLIPYTDSL 120


>gi|304383747|ref|ZP_07366206.1| GH3 auxin-responsive promoter family protein [Prevotella marshii
           DSM 16973]
 gi|304335271|gb|EFM01542.1| GH3 auxin-responsive promoter family protein [Prevotella marshii
           DSM 16973]
          Length = 509

 Score = 47.8 bits (112), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 1/100 (1%)

Query: 15  EEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPY 74
           +E E     AE +Q E L  +L      EY +N         E F   VP+ ++E L+  
Sbjct: 16  KELEQHNHAAEALQSEVLTHLLSRAKDTEYGRNHLFGMTKSYEDFAQNVPVNSYESLKDD 75

Query: 75  IQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDE 114
           I R+  G  S +L    +   ++SSGTT  K KF+P + E
Sbjct: 76  IDRMRHG-ASDVLWPGIVQWFAKSSGTTSEKSKFIPVSHE 114


>gi|372209041|ref|ZP_09496843.1| GH3 auxin-responsive promoter [Flavobacteriaceae bacterium S85]
          Length = 505

 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 48/105 (45%), Gaps = 5/105 (4%)

Query: 15  EEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPY 74
            + E   K    +Q E L K+L+      Y +        + + F   VPLV +E L PY
Sbjct: 19  HQIELFLKYPVEVQNEQLLKLLKTANKTSYGKQYQFKKIKNYQEFVEKVPLVNYEQLSPY 78

Query: 75  I--QRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
           I  QR        IL    I   ++SSGTT  K KF+P +++ ++
Sbjct: 79  IEEQRTTG---QAILWSNKIKWYAKSSGTTNAKSKFIPVSEDAIK 120


>gi|218199890|gb|EEC82317.1| hypothetical protein OsI_26595 [Oryza sativa Indica Group]
          Length = 243

 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 7/73 (9%)

Query: 327 YGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVK 386
           Y SSE + G N+ P   P   ++ ++PN  YFEF+P       S +       V L  V+
Sbjct: 2   YASSECFFGLNLRPLCGPSEVSYTIMPNTAYFEFLPVGEAVDASNL-------VELARVE 54

Query: 387 VGEEYEIIVTNVA 399
            G EYE++VT  A
Sbjct: 55  DGREYEVVVTTYA 67


>gi|357387035|ref|YP_004901873.1| hypothetical protein KSE_00650t [Kitasatospora setae KM-6054]
 gi|357394476|ref|YP_004909317.1| hypothetical protein KSE_76090t [Kitasatospora setae KM-6054]
 gi|311893509|dbj|BAJ25917.1| hypothetical protein KSE_00650t [Kitasatospora setae KM-6054]
 gi|311900953|dbj|BAJ33361.1| hypothetical protein KSE_76090t [Kitasatospora setae KM-6054]
          Length = 560

 Score = 47.4 bits (111), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 81/382 (21%), Positives = 144/382 (37%), Gaps = 40/382 (10%)

Query: 28  QRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPIL 87
           +R  L  +LE NA   Y +  G       + F+  VP+  +  L P+I+R   G+ + + 
Sbjct: 38  RRHVLADLLEFNAGTHYGREHGFAAIRTLDDFRKAVPVQDYTALGPWIERAAAGEHNVLT 97

Query: 88  TGKPITTISRSSGTTQGKPKFLPFNDELMETT-LQIFRTSYAFRNREFP--IGKGKALQF 144
             +P    + SSGTT G  K +P     M TT    +  ++A     FP  + +  A+  
Sbjct: 98  ADQPAVYFT-SSGTT-GAHKKIPVTPRFMHTTFFPFYYAAWAPLIEHFPDVLDRPDAVLN 155

Query: 145 I----YGSKQSKTKGGLNAGTATTN--VYRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQS 198
           +      +  +   G  + G +  +          AE          P  V  G    + 
Sbjct: 156 LKHDPLTAPPTTASGRPHVGASQVDFGTRFGEPLSAEPGTGAPWAVLPAHVDAGAHL-EK 214

Query: 199 LYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPSIRA 258
           +Y  L   L    +++ V       +        L W  +  DI +G L     +P    
Sbjct: 215 MYLRLR--LAVESDVRCVIGINPAMIAALPHQLNLWWPRILKDIADGTLGG---LPHG-- 267

Query: 259 AMSKILKPNPELADLIHKKCSGLSNWYGLIP-ELFPNAKYLSGIMTGSMEHYLKKLRHYA 317
                  PNP  A  + +     +  + + P  ++P  + L    TG    YL +LR   
Sbjct: 268 ------APNPRRAAELERIA---ARHHTVRPAHIWPRMRALFCWTTGLASLYLPRLREEF 318

Query: 318 G-DLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIE 376
           G D+ L+ A   +SEG +G  ++    P   +  V   +  F      L   +++ L  E
Sbjct: 319 GPDVALLPAPVAASEGPVGVALDRH--PSAGSLVVTAAVHEFADAEDDL-TPDTETLLPE 375

Query: 377 PKPVGLTEVKVGEEYEIIVTNV 398
                  E++ G +Y ++ ++V
Sbjct: 376 -------ELETGRDYHVVFSHV 390


>gi|313207388|ref|YP_004046565.1| gh3 auxin-responsive promoter [Riemerella anatipestifer ATCC 11845
           = DSM 15868]
 gi|383484754|ref|YP_005393666.1| gh3 auxin-responsive promoter [Riemerella anatipestifer ATCC 11845
           = DSM 15868]
 gi|386320613|ref|YP_006016775.1| auxin-regulated protein [Riemerella anatipestifer RA-GD]
 gi|416110360|ref|ZP_11591975.1| putative auxin-regulated protein [Riemerella anatipestifer RA-YM]
 gi|442315343|ref|YP_007356646.1| hypothetical protein G148_1648 [Riemerella anatipestifer RA-CH-2]
 gi|312446704|gb|ADQ83059.1| GH3 auxin-responsive promoter [Riemerella anatipestifer ATCC 11845
           = DSM 15868]
 gi|315023283|gb|EFT36293.1| putative auxin-regulated protein [Riemerella anatipestifer RA-YM]
 gi|325335156|gb|ADZ11430.1| auxin-regulated protein [Riemerella anatipestifer RA-GD]
 gi|380459439|gb|AFD55123.1| gh3 auxin-responsive promoter [Riemerella anatipestifer ATCC 11845
           = DSM 15868]
 gi|441484266|gb|AGC40952.1| hypothetical protein G148_1648 [Riemerella anatipestifer RA-CH-2]
          Length = 500

 Score = 47.4 bits (111), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 10/109 (9%)

Query: 57  ESFKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELM 116
           E F++ VP+  +EDL+PYI+++  G  + + T  P    +++SGTT G  K++P + E M
Sbjct: 61  EDFQNQVPIADYEDLKPYIEKVKRGQANILWTDTP-EYFAKTSGTTSG-AKYIPISKEGM 118

Query: 117 ETTLQ-----IFRTSYAFRNREFPIGKGKALQFIYGSKQSKTKGGLNAG 160
              ++     +F       N +F  GK   + F+ GS + +   G+  G
Sbjct: 119 PYQIKAAQSALFHYIAKKNNADFVNGK---MIFLQGSPELEEVNGIKTG 164


>gi|440744785|ref|ZP_20924085.1| auxin-responsive GH3-related protein [Pseudomonas syringae
           BRIP39023]
 gi|440373401|gb|ELQ10159.1| auxin-responsive GH3-related protein [Pseudomonas syringae
           BRIP39023]
          Length = 538

 Score = 47.4 bits (111), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 2/103 (1%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           ++ ++ + +  E  Q+  L ++L  N    + Q     G  D E F+  VPL ++  LQP
Sbjct: 23  LDHWQRLFEQPEESQQRLLLRMLSANRDCAFGQAHDFAGIRDAEEFRKRVPLHSYAQLQP 82

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELM 116
           +I+R       PILT        RSSG +  + K +P+  E +
Sbjct: 83  WIER-AQHQQGPILTASAPLFFERSSGNSALQ-KHIPYTQEFL 123


>gi|146298786|ref|YP_001193377.1| GH3 auxin-responsive promoter [Flavobacterium johnsoniae UW101]
 gi|146153204|gb|ABQ04058.1| GH3 auxin-responsive promoter [Flavobacterium johnsoniae UW101]
          Length = 494

 Score = 47.4 bits (111), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 26/99 (26%), Positives = 53/99 (53%), Gaps = 2/99 (2%)

Query: 28  QRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPIL 87
           Q E  + +++     ++ ++   +     E F+  VP+  +EDL+ YI+++  G+ + + 
Sbjct: 30  QFEVFKSLIQNAKDTQFGKDHHFDTIKTFEDFQKNVPVRDYEDLKDYIEKVKIGEENILW 89

Query: 88  TGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTS 126
            GKP+   +++SGTT G  K++P   E M T +   R +
Sbjct: 90  KGKPL-YFAKTSGTTSG-AKYIPLTKESMPTHVNAARNA 126


>gi|260061277|ref|YP_003194357.1| auxin-regulated protein [Robiginitalea biformata HTCC2501]
 gi|88785409|gb|EAR16578.1| putative auxin-regulated protein [Robiginitalea biformata HTCC2501]
          Length = 498

 Score = 47.0 bits (110), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 69/143 (48%), Gaps = 6/143 (4%)

Query: 21  TKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIID 80
            ++ +  Q +  R++L +  + ++ ++         E F S VP+  +E+L+P++   ++
Sbjct: 23  VRNPQAAQLKVFRELLRQGRATQFGKDHDFGDINTYEDFASRVPIRDYEELKPWVLPALE 82

Query: 81  GDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRT---SYAFRNREFPIG 137
           G    +  G+P+   +++SGTT G  K++P     +   ++  R    SY  R       
Sbjct: 83  GKEDILWPGRPL-YFAKTSGTTSG-AKYIPITRPSIREQVRASRNAILSYIHRTGRAAFV 140

Query: 138 KGKALQFIYGSKQSKTKGGLNAG 160
            GK + F+ GS + + K G+  G
Sbjct: 141 DGKMI-FLQGSPELQEKNGIKVG 162


>gi|294675189|ref|YP_003575805.1| hypothetical protein PRU_2556 [Prevotella ruminicola 23]
 gi|294472838|gb|ADE82227.1| conserved hypothetical protein [Prevotella ruminicola 23]
          Length = 502

 Score = 47.0 bits (110), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 49/100 (49%), Gaps = 1/100 (1%)

Query: 15  EEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPY 74
           +E E      + +Q   L +++ E    EY +N         + F   +P+ T+E+L+  
Sbjct: 16  KELEKHFNQGKALQEAVLGRLVAEAQDTEYGRNHAFASIKGYDDFAKHIPVNTYEELKES 75

Query: 75  IQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDE 114
           I R+  G+   +  G+ +   ++SSGTT  K KF+P + E
Sbjct: 76  IDRMRHGETDVLWPGR-VKWYAKSSGTTNDKSKFIPVSKE 114


>gi|254303174|ref|ZP_04970532.1| hypothetical protein FNP_0815 [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
 gi|148323366|gb|EDK88616.1| hypothetical protein FNP_0815 [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
          Length = 515

 Score = 47.0 bits (110), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 2/89 (2%)

Query: 27  IQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPI 86
           IQ   L++ILE N    Y +    +     + F+  VPL  +ED  PYI++I  G+   I
Sbjct: 34  IQENKLKEILENNKDTLYGKKYNFDKIKTIQDFQKEVPLTKYEDYLPYIEKIKMGE-EYI 92

Query: 87  LTGKPITTISRSSGTTQGKPKFLPFNDEL 115
           LT + +     +SG+T    K +P+ + L
Sbjct: 93  LTHEKVKMFELTSGSTSA-SKLIPYTNSL 120


>gi|386819419|ref|ZP_10106635.1| GH3 auxin-responsive promoter-binding protein [Joostella marina DSM
           19592]
 gi|386424525|gb|EIJ38355.1| GH3 auxin-responsive promoter-binding protein [Joostella marina DSM
           19592]
          Length = 499

 Score = 47.0 bits (110), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 67/138 (48%), Gaps = 10/138 (7%)

Query: 28  QRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPIL 87
           Q++  + ++E   + ++ ++           F   VP+  +E+L+PYI+R++ G+ + + 
Sbjct: 30  QQKVFKALIEGAKNTQFGKDHNFEKIESFSDFAKRVPVRDYEELKPYIERVVKGEENILW 89

Query: 88  TGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTS-----YAFRNREFPIGKGKAL 142
             KP    +++SGTT G  K++P   + M   ++  R +     Y   N +F  GK   +
Sbjct: 90  PEKP-AYFAKTSGTTSG-AKYIPITKDSMPHHIEAARNAILNYIYETGNADFVDGK---M 144

Query: 143 QFIYGSKQSKTKGGLNAG 160
            F+ GS     K G+  G
Sbjct: 145 IFLQGSPVLDEKNGIKLG 162


>gi|392592243|gb|EIW81570.1| hypothetical protein CONPUDRAFT_144290 [Coniophora puteana
           RWD-64-598 SS2]
          Length = 594

 Score = 47.0 bits (110), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 43/188 (22%), Positives = 77/188 (40%), Gaps = 12/188 (6%)

Query: 211 EEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPSIRAAMSKILKPNPEL 270
           E ++ + + ++ + V   R  +  W+ L D I  G L        +  A++     NP  
Sbjct: 245 ETLETLCTHWSTTFVDLIRWIDEEWDTLIDAIDSGRLPRYPETDDVYPAIATQFIANPAR 304

Query: 271 ADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRHYAG-DLPLMSADYGS 329
           A  + +         G I +++P  K L  + TG+      +LR   G D+P+ S     
Sbjct: 305 AKALREAGPPSHTSEGWILKIWPGCKLLGAVCTGTFGRLYPQLRACIGPDMPIRSLMVAC 364

Query: 330 SEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGE 389
           +E  IG + +  LP        +    Y E I    GN + ++       V L +++ G+
Sbjct: 365 TECLIGTSYDDRLP----CIVRMQTDDYIEMIEVLPGNQDGEL-------VPLWKLETGK 413

Query: 390 EYEIIVTN 397
            YE +VT 
Sbjct: 414 VYEPVVTT 421


>gi|407452896|ref|YP_006724621.1| hypothetical protein B739_2139 [Riemerella anatipestifer RA-CH-1]
 gi|403313880|gb|AFR36721.1| hypothetical protein B739_2139 [Riemerella anatipestifer RA-CH-1]
          Length = 500

 Score = 47.0 bits (110), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 10/109 (9%)

Query: 57  ESFKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELM 116
           E F++ VP+  +EDL+PYI+++  G  + + T  P    +++SGTT G  K++P + E M
Sbjct: 61  EDFQNQVPIADYEDLKPYIEKVKRGQANILWTDTP-EYFAKTSGTTSG-AKYIPISKEGM 118

Query: 117 ETTLQ-----IFRTSYAFRNREFPIGKGKALQFIYGSKQSKTKGGLNAG 160
              ++     +F       N +F  GK   + F+ GS + +   G+  G
Sbjct: 119 PYQIKAAQSALFHYISKKNNADFVNGK---MIFLQGSPELEEINGIKTG 164


>gi|311745446|ref|ZP_07719231.1| GH3 auxin-responsive promoter family protein [Algoriphagus sp. PR1]
 gi|311302384|gb|EAZ82217.2| GH3 auxin-responsive promoter family protein [Algoriphagus sp. PR1]
          Length = 506

 Score = 46.6 bits (109), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 22/92 (23%), Positives = 47/92 (51%), Gaps = 1/92 (1%)

Query: 26  RIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISP 85
           ++Q     ++++     E+ +    N   + + F   VP++ +E ++PYI + + G+   
Sbjct: 21  QVQDTIFFELIKAGKETEFGKEYNFNSIRNYDDFARQVPILDYEGIKPYIDKTMKGN-QG 79

Query: 86  ILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
           +L    I   ++SSGTT  + K++P   E +E
Sbjct: 80  VLWNSDIEWFAKSSGTTSSRSKYIPVTTECLE 111


>gi|302036791|ref|YP_003797113.1| hypothetical protein NIDE1439 [Candidatus Nitrospira defluvii]
 gi|190343207|gb|ACE75595.1| conserved protein of unknown function [Candidatus Nitrospira
           defluvii]
 gi|300604855|emb|CBK41188.1| conserved protein of unknown function, contains GH3 auxin
           responsive-like domain [Candidatus Nitrospira defluvii]
          Length = 545

 Score = 46.6 bits (109), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 95/390 (24%), Positives = 154/390 (39%), Gaps = 60/390 (15%)

Query: 25  ERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDIS 84
           E  Q+  LR IL + A   + Q          E F   VP+ T+EDL+P I+   +    
Sbjct: 33  ELAQQAVLRDILLQQAGTAFGQAHRFGSLHTYEEFAGEVPVSTYEDLRPAIE-AQEKSGK 91

Query: 85  PILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREF----PIGKGK 140
           P+LT       +++SGTT G PK +P    L +T   I R    F   ++     I +G 
Sbjct: 92  PLLTSARPILYTQTSGTT-GVPKHIPI---LTQTVGAIRRYQRLFAYAQWQGVPAIYQGS 147

Query: 141 ALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQSLY 200
            L     S +    GG   G+ +        F     A++ +    D      D+ Q  Y
Sbjct: 148 VLVISGQSIEGHLPGGTPFGSMS-----GLMFNCLPAAIRRKSLLRDGESAASDYRQR-Y 201

Query: 201 CHLLCGLIFREEIQLVFS---TFAHSLVHAFRT-FELVWEELCDDIREGV--LSSRITVP 254
            ++    +    I ++ +   +    L+   R+ + L+ E L  + R G   L  R+ + 
Sbjct: 202 LNIAVRALADPSISVLATPNPSTILKLLEVIRSEYALLLETLSGETRGGCPPLPERVPIS 261

Query: 255 SIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLR 314
           S R +  +      E  D     C            L+PN + +   M G+    + +LR
Sbjct: 262 STRLSQLRAFIGQEEALD-----CG----------TLWPNLQAVVTWMGGNCAVLIPRLR 306

Query: 315 HYAGDLP----LMSADYGSSE--GWIGANV-NPSLPPELATFAVLPNIGYFEFIPQRLGN 367
                LP    ++   Y SSE  G +  +V N    P LA          FEF+   +G+
Sbjct: 307 SL---LPQRARIIEMGYLSSECLGTVNVDVLNNRCVPTLAD-------NLFEFV--EVGD 354

Query: 368 LESQVLCIEPKPVGLTEVKVGEEYEIIVTN 397
             S V     KP+ L +++ G +Y +IVT 
Sbjct: 355 EASDV-----KPILLHQLQAGRKYTVIVTT 379


>gi|340347158|ref|ZP_08670271.1| GH3 auxin-responsive promoter family protein [Prevotella dentalis
           DSM 3688]
 gi|433652364|ref|YP_007278743.1| GH3 auxin-responsive promoter-binding protein [Prevotella dentalis
           DSM 3688]
 gi|339610241|gb|EGQ15101.1| GH3 auxin-responsive promoter family protein [Prevotella dentalis
           DSM 3688]
 gi|433302897|gb|AGB28713.1| GH3 auxin-responsive promoter-binding protein [Prevotella dentalis
           DSM 3688]
          Length = 503

 Score = 46.6 bits (109), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 1/96 (1%)

Query: 15  EEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPY 74
           +E E      E +Q+E L+ ++ +  + EY +N  L      + F   VP+ T+E+L+  
Sbjct: 16  KELERHYTHPEALQQEALKYLIGKGQNTEYGRNHLLANTLSYDDFVQNVPVNTYEELKAD 75

Query: 75  IQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLP 110
           I R+  G    +  G  +   ++SSGTT  K KF+P
Sbjct: 76  IDRMRHGAADVLWPG-VVKWFAKSSGTTNDKSKFIP 110


>gi|332291828|ref|YP_004430437.1| GH3 auxin-responsive promoter [Krokinobacter sp. 4H-3-7-5]
 gi|332169914|gb|AEE19169.1| GH3 auxin-responsive promoter [Krokinobacter sp. 4H-3-7-5]
          Length = 496

 Score = 46.6 bits (109), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 14/140 (10%)

Query: 30  ETLRKILEENASAEYLQNLGLNGRTDP----ESFKSCVPLVTHEDLQPYIQRIIDGDISP 85
           ET  K+ E    A      G + R D       F   VP+  +EDL+ Y+ +++ G+   
Sbjct: 28  ETQHKVFESLIDAAQYTTFGNDHRFDTIKSHADFVKQVPIRDYEDLRYYVDKMVAGEPDI 87

Query: 86  ILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRT---SYAFR--NREFPIGKGK 140
           +  GKP+   +++SGTT G  K++P   + M+T     R    SY     N +F  GK  
Sbjct: 88  LWPGKPL-YFAKTSGTTSG-VKYIPLTKDSMKTHPNSARNAILSYIAETGNTDFVDGK-- 143

Query: 141 ALQFIYGSKQSKTKGGLNAG 160
            + F+ GS +   K G+  G
Sbjct: 144 -MIFLQGSPEMTEKNGIKLG 162


>gi|323449252|gb|EGB05142.1| hypothetical protein AURANDRAFT_66661 [Aureococcus anophagefferens]
          Length = 632

 Score = 46.6 bits (109), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 58/115 (50%), Gaps = 11/115 (9%)

Query: 286 GLIPELFPNAKYLSGIMTGSMEHYLKKLRHYAG-DLPLMSADYGSSEGWIGANVNPSLPP 344
           G    L+P  K +    TG+ E + ++LR  AG  +P+ S    +SEG +G ++ P    
Sbjct: 339 GFALRLWPKLKLILANATGAFEPHARRLRAGAGAGVPIRSTILAASEGLMGVSLEPRDDG 398

Query: 345 ELATFAVLPNIGYFEFIPQRLGNL-ESQVLCIEPKPVGLTEVKVGEEYEIIVTNV 398
           E A + ++P    FEF+P   G   ++ VL          E++ G +YE++VT +
Sbjct: 399 E-AAYCLVPRAMVFEFLPVVDGEAGDATVLA--------GELEAGADYELVVTTL 444



 Score = 42.0 bits (97), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 45/101 (44%), Gaps = 8/101 (7%)

Query: 25  ERIQRETLRKILEENASAEYLQNLGLNGRTDPES----FKSCVPLVTHEDLQPYIQRIID 80
           E  Q   L+ +LE N    Y  + G       +     F++  PL T+ D+ PY+ RI +
Sbjct: 65  EDTQAALLKSLLERNKDTAYGVDRGFAALAAADDVVAAFRAAHPLTTYADVAPYVDRIYE 124

Query: 81  GDISPILTGKPITTISRSSGTT---QGKPKFLPFNDELMET 118
               P+L   P   ++ +SGT+    G+   LP   E+  T
Sbjct: 125 HG-GPVLNASPERMLAATSGTSGPASGRVALLPTTPEMSST 164


>gi|300774871|ref|ZP_07084734.1| GH3 auxin-responsive promoter family protein [Chryseobacterium
           gleum ATCC 35910]
 gi|300506686|gb|EFK37821.1| GH3 auxin-responsive promoter family protein [Chryseobacterium
           gleum ATCC 35910]
          Length = 499

 Score = 46.2 bits (108), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 2/103 (1%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           + + E   K+AER Q   L  ++       + +          + F+  VP+  +EDL+P
Sbjct: 18  VRKAEDFKKNAERDQENLLLSLVNTAQKTLFGREHDFENIHTVKEFQDRVPVADYEDLKP 77

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELM 116
           YI+R+  G  + + T  P    +++SGTT G  K++P + E M
Sbjct: 78  YIERVKKGQANILWTETP-EYFAKTSGTTSG-SKYIPISKEGM 118


>gi|188529685|gb|ACD62529.1| GH3-like protein [Solanum lycopersicum]
          Length = 43

 Score = 46.2 bits (108), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 21/41 (51%), Positives = 28/41 (68%), Gaps = 1/41 (2%)

Query: 270 LADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYL 310
           LAD I  +CS  S W G+IP L+PN KY+  I+TG+M  Y+
Sbjct: 2   LADFIEMECSKES-WKGIIPRLWPNTKYVDVIVTGTMSQYI 41


>gi|440751119|ref|ZP_20930356.1| putative auxin-regulated protein [Mariniradius saccharolyticus AK6]
 gi|436480324|gb|ELP36568.1| putative auxin-regulated protein [Mariniradius saccharolyticus AK6]
          Length = 505

 Score = 46.2 bits (108), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 24/91 (26%), Positives = 47/91 (51%), Gaps = 1/91 (1%)

Query: 27  IQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPI 86
           +Q +    ++E+    E  +    +   +   F S VP+  +E ++PYI++ + G+   +
Sbjct: 29  VQTQVFEDLIEKAKRTEIGRKFHFSDIKNHRDFASQVPIHDYEQIKPYIEKTMRGE-QNV 87

Query: 87  LTGKPITTISRSSGTTQGKPKFLPFNDELME 117
           L    I   S+SSGTT  + K++P + E +E
Sbjct: 88  LWPTDIYWFSKSSGTTGSRSKYIPVSQESLE 118


>gi|375143935|ref|YP_005006376.1| GH3 auxin-responsive promoter [Niastella koreensis GR20-10]
 gi|361057981|gb|AEV96972.1| GH3 auxin-responsive promoter [Niastella koreensis GR20-10]
          Length = 497

 Score = 46.2 bits (108), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 39/163 (23%), Positives = 80/163 (49%), Gaps = 9/163 (5%)

Query: 28  QRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPIL 87
           Q   L+++L+   + E+ +   L      E +   VP+  +E  +PYI++I +G  + + 
Sbjct: 30  QEAILKELLKIGKATEFGKEHHLPEINVHEEYVQAVPVRDYEQFKPYIEKIKEGKHNVLW 89

Query: 88  TGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTS---YAFRNREFPIGKGKALQF 144
            G PI  ++++SGTT G  K++P + E ++  +   R +   Y   +       GK + F
Sbjct: 90  KGLPI-YLAKTSGTTSG-VKYIPISKESIDNHINTARNALLCYIAESGNTNFTDGKMI-F 146

Query: 145 IYGSKQSKTKGGLNAG--TATTNVYRSSTFKA-EMKAMQSQCC 184
           + GS + +  GG+  G  +   N +  S  +A ++ + ++ C 
Sbjct: 147 LSGSPELERIGGIPTGRLSGIVNHHVPSYLRANQLPSYETNCI 189


>gi|291514602|emb|CBK63812.1| GH3 auxin-responsive promoter [Alistipes shahii WAL 8301]
          Length = 491

 Score = 46.2 bits (108), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 1/87 (1%)

Query: 28  QRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPIL 87
           Q    R++L      E+     L      E F+S V    +E  +PYI+R+++G  S   
Sbjct: 30  QARMFRQLLRRGRFTEFGDRYDLRHIRSVERFQSQVETFDYETFKPYIERMMEGVRSVTA 89

Query: 88  TGKPITTISRSSGTTQGKPKFLPFNDE 114
            G+ ++  +RSSGTT  + K++P   E
Sbjct: 90  PGR-VSLFARSSGTTSDRSKYIPVTME 115


>gi|326334774|ref|ZP_08200980.1| GH3 auxin-responsive promoter family protein [Capnocytophaga sp.
           oral taxon 338 str. F0234]
 gi|325693087|gb|EGD35020.1| GH3 auxin-responsive promoter family protein [Capnocytophaga sp.
           oral taxon 338 str. F0234]
          Length = 503

 Score = 46.2 bits (108), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 58/109 (53%), Gaps = 10/109 (9%)

Query: 57  ESFKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELM 116
           + F   VP+  +E L PYI+R+ +G+ + +  GKP+   +++SGTT G  K++P   + M
Sbjct: 59  KDFVVRVPIRDYEALTPYIERVKNGESNILWKGKPL-YFAKTSGTTSG-AKYIPITRDSM 116

Query: 117 ETTLQIFRTS---YAFR--NREFPIGKGKALQFIYGSKQSKTKGGLNAG 160
              +Q  R +   Y  +  N EF  GK   + F+ GS   + K G+  G
Sbjct: 117 PYHIQAARDAIMCYIAQTGNAEFVDGK---MIFLQGSPLLEKKNGIRQG 162


>gi|374364643|ref|ZP_09622744.1| auxin-responsive GH3-related protein [Cupriavidus basilensis OR16]
 gi|373103775|gb|EHP44795.1| auxin-responsive GH3-related protein [Cupriavidus basilensis OR16]
          Length = 528

 Score = 46.2 bits (108), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 3/113 (2%)

Query: 30  ETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPILTG 89
             L ++L +N  + + +  G     DP  F+  VP+ +H +L P+I R +  +  P+LT 
Sbjct: 39  RVLARLLADNRESAFGRAHGFARIADPTQFRERVPVHSHAELLPWIDRALR-ESQPVLTM 97

Query: 90  KPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP-IGKGKA 141
           +P     R+SG    + K +P+    +    +      A   R  P IG G+A
Sbjct: 98  QPPRFFERTSGNG-AQQKLIPYTPAFLGEMQRALTIWLADLYRRLPEIGAGRA 149


>gi|325286254|ref|YP_004262044.1| GH3 auxin-responsive promoter [Cellulophaga lytica DSM 7489]
 gi|324321708|gb|ADY29173.1| GH3 auxin-responsive promoter [Cellulophaga lytica DSM 7489]
          Length = 498

 Score = 46.2 bits (108), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 32/136 (23%), Positives = 67/136 (49%), Gaps = 6/136 (4%)

Query: 28  QRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPIL 87
           Q +  ++++++ A+ ++ ++   N       F   VP+  +E L+ Y+  +++G  + + 
Sbjct: 30  QEKVFKQLIQKAANTKFGKDHSFNAIKTHSDFVKNVPVRDYEALKNYVDEVVEGKSNVLW 89

Query: 88  TGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTS---YAFRNREFPIGKGKALQF 144
            GKP    +++SGTT G  K++P   E ++  +Q  R +   Y     E     G+ + F
Sbjct: 90  PGKP-AYFAKTSGTTSG-AKYIPITKESIKYQIQASRDAILNYINETGEADFVTGRMI-F 146

Query: 145 IYGSKQSKTKGGLNAG 160
           + GS   + K G+  G
Sbjct: 147 LQGSPILQEKNGVKLG 162


>gi|344202672|ref|YP_004787815.1| GH3 auxin-responsive promoter [Muricauda ruestringensis DSM 13258]
 gi|343954594|gb|AEM70393.1| GH3 auxin-responsive promoter [Muricauda ruestringensis DSM 13258]
          Length = 499

 Score = 45.8 bits (107), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 57/109 (52%), Gaps = 10/109 (9%)

Query: 57  ESFKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELM 116
           + F   VP+  +E+L+ Y+Q+IIDG    +  GKPI   +++SGTT G  K++P     +
Sbjct: 59  QDFVERVPIRDYEELKGYVQQIIDGKSDVLWPGKPI-YFAKTSGTTSG-AKYIPITKPSI 116

Query: 117 ETTLQIFRTS-----YAFRNREFPIGKGKALQFIYGSKQSKTKGGLNAG 160
           +  ++  R +     +   N +F  GK   + F+ GS   + K G+  G
Sbjct: 117 KNQVEASRNAILNYIHETGNADFVDGK---MIFLQGSPILEEKNGIKLG 162


>gi|256421091|ref|YP_003121744.1| GH3 auxin-responsive promoter [Chitinophaga pinensis DSM 2588]
 gi|256035999|gb|ACU59543.1| GH3 auxin-responsive promoter [Chitinophaga pinensis DSM 2588]
          Length = 497

 Score = 45.8 bits (107), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 37/157 (23%), Positives = 73/157 (46%), Gaps = 10/157 (6%)

Query: 7   TVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLV 66
           ++  +++ +E +   +D E I    L ++++     E+  +       +   +K  VP+ 
Sbjct: 13  SIVANKIRKEMQRAVEDQEAI----LEELIKTGRKTEFGNDHQFGNINNYNDYKQAVPVR 68

Query: 67  THEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTS 126
            +E  +PYI +I DG  + +  G+PI  ++++SGTT G  K++P   + +   +   R +
Sbjct: 69  DYEQFKPYINKIKDGKQNVLWKGQPI-YLAKTSGTTSG-VKYIPITKDSISNHIDTARNA 126

Query: 127 ---YAFRNREFPIGKGKALQFIYGSKQSKTKGGLNAG 160
              Y           GK L F+ GS   +  GG+  G
Sbjct: 127 LLNYMSETGRTEFADGK-LIFLSGSPILERVGGIPYG 162


>gi|225012528|ref|ZP_03702964.1| GH3 auxin-responsive promoter [Flavobacteria bacterium MS024-2A]
 gi|225003505|gb|EEG41479.1| GH3 auxin-responsive promoter [Flavobacteria bacterium MS024-2A]
          Length = 504

 Score = 45.8 bits (107), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 65/135 (48%), Gaps = 11/135 (8%)

Query: 57  ESFKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELM 116
           + F+S +P+  +E L+ YI  I++G+   +  G+P+   ++SSGTT G  K++P   E M
Sbjct: 58  KEFQSAIPIRDYEGLKKYIDAILNGESDVLWPGRPLYY-AKSSGTTSG-AKYIPITKESM 115

Query: 117 ETTLQIFRTSYAFRNREFPIGKGKALQ----FIYGSKQSKTKGGLNAGTATTNVYR---S 169
              ++  +   A  N  F  GK  ++     F+ GS   + K G+  G  +  V     S
Sbjct: 116 PQHIRAAKE--AILNYIFKTGKAASVNGKHIFLQGSPVLEDKKGIALGRLSGIVAHYVPS 173

Query: 170 STFKAEMKAMQSQCC 184
              K  M + ++ C 
Sbjct: 174 YLQKNRMPSWETNCI 188


>gi|402830490|ref|ZP_10879192.1| GH3 auxin-responsive promoter [Capnocytophaga sp. CM59]
 gi|402285323|gb|EJU33810.1| GH3 auxin-responsive promoter [Capnocytophaga sp. CM59]
          Length = 496

 Score = 45.4 bits (106), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 6/136 (4%)

Query: 28  QRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPIL 87
           Q +  R I+++     + ++         E F   VP+  +E L PYI+R+  G+ + + 
Sbjct: 30  QEKVFRSIIQKAKHTAFGRDHHFEEIHSYEDFVQRVPIRDYEALAPYIERVKKGEENILW 89

Query: 88  TGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTS---YAFRNREFPIGKGKALQF 144
            GKP+   +++SGTT G  K++P   + M   ++  R +   Y     +     GK + F
Sbjct: 90  PGKPL-YFAKTSGTTSG-AKYIPLTKDSMPYHIEAARNAIMCYIAETGKADFVSGKMI-F 146

Query: 145 IYGSKQSKTKGGLNAG 160
           + GS   + K G+  G
Sbjct: 147 LQGSPILEKKNGIRLG 162


>gi|336378195|gb|EGO19354.1| hypothetical protein SERLADRAFT_479847 [Serpula lacrymans var.
           lacrymans S7.9]
          Length = 520

 Score = 45.4 bits (106), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 77/362 (21%), Positives = 143/362 (39%), Gaps = 48/362 (13%)

Query: 63  VPLVTHEDLQPYIQRIID-----GDISPILTGKPITTISRSSGTTQGKPKFLP--FNDEL 115
           VPL  ++D  P++ R+ +      ++  ++       I+ SSGT+ G  K  P   + E 
Sbjct: 4   VPLSVYKDYHPFVSRLFEEPCTVSNVENLMAPGIPYFIAHSSGTSNGVTKHFPKYRHPEH 63

Query: 116 METTLQIFRTSYAFRNREFPIGKGKALQFIYGSKQS----KTKGGLN-------AGTATT 164
           M T+      + A  N     G    + F  G +Q       +G +          T T 
Sbjct: 64  MSTSTA---GTMAASNPVSKHGGKNCIAFSLGHRQVVQPLDHEGNIARRIPVCLMSTGTV 120

Query: 165 NVYRSSTFKAEMKAMQS----QCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTF 220
            ++     + + +  QS       SP  V + P++   L+ H L  L     ++L+ + F
Sbjct: 121 RMHNDMAVERD-QIYQSIRIPNNSSPLAVSYIPNYKSFLFMHALFALQ-EPNMELINTMF 178

Query: 221 AHSLVHAFRTFELVWEELCDDIREG-VLSSRITVPSIRAAMSKILKPNPELADLIHKKCS 279
           +       R  E  WE L   I +G V     T P I         PNPE A+ + +   
Sbjct: 179 STIFRDFCRVIEEQWETLVQCIEDGNVPELEATGPFIENLRRLFGGPNPERANYL-RTIG 237

Query: 280 GLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRHYAG-DLPLMSADYGSSEGWIGANV 338
             ++  G + +++P  + +  I +G     + +  H+ G D+ + +     SE ++    
Sbjct: 238 KATDEPGWLKKIWPGLRTIVAISSGPFITVVPECHHFIGPDVVMQTLGINCSEAFLALAY 297

Query: 339 NPSLPPELATFAVLPNIGYFEFI----PQRLGNLESQVLCIEPKPVGLTEVKVGEEYEII 394
           +   P   + + V+ +    EF+    P+   +L                VK+GE+YE+I
Sbjct: 298 DSRDP---SLYKVVGSDEIIEFLNVNEPEEAKSLTQT-----------WNVKLGEKYEVI 343

Query: 395 VT 396
           +T
Sbjct: 344 LT 345


>gi|126663142|ref|ZP_01734140.1| putative auxin-regulated protein [Flavobacteria bacterium BAL38]
 gi|126624800|gb|EAZ95490.1| putative auxin-regulated protein [Flavobacteria bacterium BAL38]
          Length = 503

 Score = 45.4 bits (106), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 67/143 (46%), Gaps = 10/143 (6%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           I + E   K    +Q E L  +++   + +  +    +   +  +F   +P+ T+E+L+P
Sbjct: 18  IHQMELFLKYPHEVQDELLFSLIKSAENTQIGRKYDFSSMKNYTTFSERIPVSTYEELEP 77

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTS------Y 127
            I+    G+   +     I   ++SSGTT  K KF+P + E +E     ++ S      Y
Sbjct: 78  LIELTRKGE-QNVFWHSNIKWFAKSSGTTNAKSKFIPVSSEALENCH--YKASKDLLCLY 134

Query: 128 AFRNREFPIGKGKALQFIYGSKQ 150
              N +  +  GK+L+ + GSKQ
Sbjct: 135 LNNNEDSQLFTGKSLR-LGGSKQ 156


>gi|423315985|ref|ZP_17293890.1| hypothetical protein HMPREF9699_00461 [Bergeyella zoohelcum ATCC
           43767]
 gi|405585078|gb|EKB58916.1| hypothetical protein HMPREF9699_00461 [Bergeyella zoohelcum ATCC
           43767]
          Length = 502

 Score = 45.4 bits (106), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 13/110 (11%)

Query: 57  ESFKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELM 116
           + F+  VP+  +EDL+PYI+RI  G    +    P T  +++SGTT G  K++P   E M
Sbjct: 61  QDFQRQVPISDYEDLRPYIERIKKGQAHILYPDTP-TYFAKTSGTTSG-AKYIPLTSEGM 118

Query: 117 ETTLQ-----IFRTSYAFRNREFPIGK------GKALQFIYGSKQSKTKG 155
           +  ++     +F       N +F  GK        AL+ ++G K  +  G
Sbjct: 119 DDQVKAAQSALFHYIAQKNNADFVNGKMIFLQGSPALEDLFGIKVGRLSG 168


>gi|417948231|ref|ZP_12591378.1| GH3 auxin-responsive promoter [Vibrio splendidus ATCC 33789]
 gi|342809886|gb|EGU44983.1| GH3 auxin-responsive promoter [Vibrio splendidus ATCC 33789]
          Length = 513

 Score = 45.4 bits (106), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 27/113 (23%), Positives = 59/113 (52%), Gaps = 2/113 (1%)

Query: 2   LEKMETVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKS 61
           ++ + T+   +   +++ + KD    Q    +K+++     ++ +    +       F+S
Sbjct: 1   MKIIHTLRYAQTKRKYKKLLKDPISGQSNVFKKLIKSGRKTQFGKQNNFSSICTVRDFQS 60

Query: 62  CVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDE 114
            VP+ T+E + PY++R++ G+ S +  GKP    + +SGTT G+ K++P   E
Sbjct: 61  LVPIQTNETIAPYMRRVVLGEESVLWPGKP-RYFACTSGTT-GEIKYVPVTKE 111


>gi|257125086|ref|YP_003163200.1| GH3 auxin-responsive promoter [Leptotrichia buccalis C-1013-b]
 gi|257049025|gb|ACV38209.1| GH3 auxin-responsive promoter [Leptotrichia buccalis C-1013-b]
          Length = 638

 Score = 45.4 bits (106), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 26/104 (25%), Positives = 59/104 (56%), Gaps = 10/104 (9%)

Query: 26  RIQRETLRKILEENASAEYLQNLG-----LNGRTDPE---SFKSCVPLVTHEDLQPYIQR 77
           + Q + L +IL+ N + EYL+N       LN   + E    F++ +P+V +ED++ ++++
Sbjct: 48  KTQVKILLEILKTNKNTEYLKNFETESQILNAENEKELIEKFQNKIPIVNYEDIKEFVEK 107

Query: 78  IIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQ 121
              G+ + +L+ K I     +SG+T    K++P+ ++ +++ + 
Sbjct: 108 EKSGENNVLLSDK-IKLFELTSGSTSN-VKYIPYTEKFLKSYMN 149


>gi|120437613|ref|YP_863299.1| hypothetical protein GFO_3289 [Gramella forsetii KT0803]
 gi|117579763|emb|CAL68232.1| conserved hypothetical protein, auxin-inducible GH3 family
           [Gramella forsetii KT0803]
          Length = 497

 Score = 45.4 bits (106), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 33/136 (24%), Positives = 67/136 (49%), Gaps = 6/136 (4%)

Query: 28  QRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPIL 87
           Q +  ++++++  + ++ +    N  +    F   VP+  +E+L+PY+  +++G    + 
Sbjct: 30  QDKVFQELIKKAKNTKFGKEHNFNKISTHLDFIQNVPIRDYEELKPYVDLMVEGQEDILW 89

Query: 88  TGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTS---YAFRNREFPIGKGKALQF 144
            GKP+   +++SGTT G  K++P   E M T +   R +   Y     +     GK + F
Sbjct: 90  PGKPL-YYAKTSGTTSG-AKYIPLTKESMPTHINAARNAILCYIEDTGKSKFVDGKMI-F 146

Query: 145 IYGSKQSKTKGGLNAG 160
           + GS +   K G+  G
Sbjct: 147 LQGSPELDEKNGVKLG 162


>gi|406672544|ref|ZP_11079769.1| hypothetical protein HMPREF9700_00311 [Bergeyella zoohelcum CCUG
           30536]
 gi|405587088|gb|EKB60816.1| hypothetical protein HMPREF9700_00311 [Bergeyella zoohelcum CCUG
           30536]
          Length = 502

 Score = 45.4 bits (106), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 13/110 (11%)

Query: 57  ESFKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELM 116
           + F+  VP+  +EDL+PYI+RI  G    +    P T  +++SGTT G  K++P   E M
Sbjct: 61  QDFQRQVPISDYEDLRPYIERIKKGQAHILYPDTP-TYFAKTSGTTSG-AKYIPLTSEGM 118

Query: 117 ETTLQ-----IFRTSYAFRNREFPIGK------GKALQFIYGSKQSKTKG 155
           +  ++     +F       N +F  GK        AL+ ++G K  +  G
Sbjct: 119 DDQVKAAQSALFHYIAQKNNADFVNGKMIFLQGSPALEDLFGIKVGRLSG 168


>gi|392586377|gb|EIW75714.1| hypothetical protein CONPUDRAFT_93407 [Coniophora puteana
           RWD-64-598 SS2]
          Length = 463

 Score = 45.1 bits (105), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 49/205 (23%), Positives = 88/205 (42%), Gaps = 13/205 (6%)

Query: 194 DFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITV 253
           ++   L  H    L  R  + ++F T++ +++   +  +  WE L + I +G L      
Sbjct: 97  NYRSLLLTHAAFALAERS-VDVLFLTWSTTVIDFMQWVDEEWEALLEGIEKGKLPHFPET 155

Query: 254 PSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKL 313
             + AA++     +PE A+ + K         G   + +P+   L  I TG+ E  L K+
Sbjct: 156 EEVHAAIATKFHADPERAEELRKIGPPSGAAIGWAKKTWPSLNSLWVISTGAFERPLPKV 215

Query: 314 RHYAG-DLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQV 372
           R + G D+ + +  Y  +E  I        P   + + VL N  Y E + + LG+ E   
Sbjct: 216 RAFVGSDVRIATPGYFCTESPIAGTFGDEAP---SLYKVL-NDNYIELL-EVLGDGEDGA 270

Query: 373 LCIEPKPVGLTEVKVGEEYEIIVTN 397
           +        L EV+ G+ YE + T 
Sbjct: 271 VK------QLWEVEYGKLYEPVFTT 289


>gi|399026151|ref|ZP_10728115.1| GH3 auxin-responsive promoter-binding protein [Chryseobacterium sp.
           CF314]
 gi|398076616|gb|EJL67674.1| GH3 auxin-responsive promoter-binding protein [Chryseobacterium sp.
           CF314]
          Length = 499

 Score = 45.1 bits (105), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 36/152 (23%), Positives = 71/152 (46%), Gaps = 10/152 (6%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           +++ E   +++E+ Q + L  +++      + +          E F+  V +  +EDL+P
Sbjct: 18  VQKAEEFKRNSEKDQEKLLLSLVDTAKKTLFGREHDFENIRSVEDFQEKVSIADYEDLKP 77

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTL-----QIFRTSYA 128
           YI+R+  G  + + T  P    +++SGTT G  K++P + E M   +      +F     
Sbjct: 78  YIERVKRGQANILWTDTP-EYFAKTSGTTSG-SKYIPISKEGMPYQIAGAQSALFHYIAK 135

Query: 129 FRNREFPIGKGKALQFIYGSKQSKTKGGLNAG 160
             N +F  GK   + F+ GS + +   G+  G
Sbjct: 136 KNNADFVQGK---MIFLQGSPEMEEVYGIKTG 164


>gi|392592247|gb|EIW81574.1| hypothetical protein CONPUDRAFT_154107 [Coniophora puteana
           RWD-64-598 SS2]
          Length = 606

 Score = 45.1 bits (105), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 39/188 (20%), Positives = 77/188 (40%), Gaps = 12/188 (6%)

Query: 211 EEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPSIRAAMSKILKPNPEL 270
           E +  +  ++A + +   R  +  WE L D I  GVL        +   ++ + K +PE 
Sbjct: 257 EPLDTLSMSWATTFIDFVRLVDEEWEMLVDGISTGVLPRFAETEHVYTKIASVFKADPER 316

Query: 271 ADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRHYAG-DLPLMSADYGS 329
           A  + K         G   +++P  + L  + TG+      ++R   G ++P+    Y  
Sbjct: 317 AAALRKVGPPSQTTEGWTVKVWPKLELLIAVCTGTFGRVYPQVRACIGPNIPIRPPFYAC 376

Query: 330 SEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGE 389
           +E  IG   +  +P        + N+ Y E +     N + ++         + EV+ G+
Sbjct: 377 TEATIGGPYDDRIP----NIVKVSNMEYIEMLEVTSDNEDGELKS-------MWEVEAGK 425

Query: 390 EYEIIVTN 397
            YE ++T 
Sbjct: 426 VYEPVLTT 433


>gi|295131924|ref|YP_003582600.1| hypothetical protein ZPR_0041 [Zunongwangia profunda SM-A87]
 gi|294979939|gb|ADF50404.1| conserved hypothetical protein [Zunongwangia profunda SM-A87]
          Length = 499

 Score = 45.1 bits (105), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 54/106 (50%), Gaps = 6/106 (5%)

Query: 58  SFKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
            F   VP+  +EDL+ Y+ +++ G+   +  GKP+   +++SGTT G  K++P   E M 
Sbjct: 60  DFVEKVPIRDYEDLRAYVDKMVAGEEDILWPGKPL-YYAKTSGTTSG-AKYIPITKESMP 117

Query: 118 TTLQIFRTS---YAFRNREFPIGKGKALQFIYGSKQSKTKGGLNAG 160
           T ++  R +   Y     +     GK + F+ GS +   K G+  G
Sbjct: 118 THIEAARNAILCYIAETGKAKFVNGKMI-FLQGSPELTEKNGVKLG 162


>gi|390945484|ref|YP_006409244.1| GH3 auxin-responsive promoter-binding protein [Alistipes finegoldii
           DSM 17242]
 gi|390422053|gb|AFL76559.1| GH3 auxin-responsive promoter-binding protein [Alistipes finegoldii
           DSM 17242]
          Length = 490

 Score = 45.1 bits (105), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 1/87 (1%)

Query: 28  QRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPIL 87
           Q    R++L      E+     L      E F++ V    +E  +PYI++++ G+ +   
Sbjct: 30  QERVFRQLLRRGRRTEFGWRYDLGHVRTVEQFQTMVETFDYETFKPYIEKMLAGEKNVAS 89

Query: 88  TGKPITTISRSSGTTQGKPKFLPFNDE 114
            G+ +   +RSSGTT  + K++P  +E
Sbjct: 90  PGR-VKLFARSSGTTSDRSKYIPVTEE 115


>gi|334366567|ref|ZP_08515492.1| GH3 auxin-responsive promoter [Alistipes sp. HGB5]
 gi|313157071|gb|EFR56501.1| GH3 auxin-responsive promoter [Alistipes sp. HGB5]
          Length = 490

 Score = 45.1 bits (105), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 1/87 (1%)

Query: 28  QRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPIL 87
           Q    R++L      E+     L      E F++ V    +E  +PYI++++ G+ +   
Sbjct: 30  QERVFRQLLRRGRRTEFGWRYDLGHVRTVEQFQTMVETFDYETFKPYIEKMLAGEKNVAS 89

Query: 88  TGKPITTISRSSGTTQGKPKFLPFNDE 114
            G+ +   +RSSGTT  + K++P  +E
Sbjct: 90  PGR-VKLFARSSGTTSDRSKYIPVTEE 115


>gi|388599928|ref|ZP_10158324.1| GH3 auxin-responsive promoter [Vibrio campbellii DS40M4]
          Length = 513

 Score = 45.1 bits (105), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 55/103 (53%), Gaps = 2/103 (1%)

Query: 12  ELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDL 71
           ++ ++++ +  D    Q    +K+++     ++ Q    +   +   F+S VP+ T+E +
Sbjct: 11  QVKKKYKKLLNDPITGQENVFKKLIKLGRKTQFGQRYNFHRVCNIRDFQSFVPIQTNETI 70

Query: 72  QPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDE 114
            PY+QR+  G+ + +  GKP    + +SGTT G+ K++P   E
Sbjct: 71  APYMQRVTLGEKNVLWPGKP-RYFACTSGTT-GEVKYVPVTKE 111


>gi|383452014|ref|YP_005358735.1| hypothetical protein KQS_13905 [Flavobacterium indicum GPTSA100-9]
 gi|380503636|emb|CCG54678.1| Protein of unknown function [Flavobacterium indicum GPTSA100-9]
          Length = 495

 Score = 45.1 bits (105), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 32/136 (23%), Positives = 68/136 (50%), Gaps = 6/136 (4%)

Query: 28  QRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPIL 87
           Q +  + +L++ ++ ++  +   +     E F + VP+  +E L+ Y+ +++ G+ + + 
Sbjct: 30  QDQVFKDLLQKASTTQFGIDHKFDTVLTHEDFVNQVPVRDYEGLKCYVDQVVKGEENILW 89

Query: 88  TGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTS---YAFRNREFPIGKGKALQF 144
            GKP+   +++SGTT G  K++P   E M   ++  R +   Y     +     GK + F
Sbjct: 90  PGKPL-YFAKTSGTTSG-AKYIPLTKESMPYHIEAARNAILNYIHETGKTDFVDGKMI-F 146

Query: 145 IYGSKQSKTKGGLNAG 160
           + GS +   K G+  G
Sbjct: 147 LQGSPELTEKNGIKLG 162


>gi|444426269|ref|ZP_21221690.1| GH3 auxin-responsive promoter [Vibrio campbellii CAIM 519 = NBRC
           15631]
 gi|444240501|gb|ELU52041.1| GH3 auxin-responsive promoter [Vibrio campbellii CAIM 519 = NBRC
           15631]
          Length = 513

 Score = 45.1 bits (105), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 55/103 (53%), Gaps = 2/103 (1%)

Query: 12  ELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDL 71
           ++ ++++ +  D    Q    +K+++     ++ Q    +   +   F+S VP+ T+E +
Sbjct: 11  QVKKKYKKLLNDPITGQENVFKKLIKLGRKTQFGQRYNFHRVCNIRDFQSFVPIQTNETI 70

Query: 72  QPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDE 114
            PY+QR+  G+ + +  GKP    + +SGTT G+ K++P   E
Sbjct: 71  APYMQRVTLGEKNVLWPGKP-RYFACTSGTT-GEIKYVPVTKE 111


>gi|421494797|ref|ZP_15942138.1| hypothetical protein MU9_3310 [Morganella morganii subsp. morganii
           KT]
 gi|455739944|ref|YP_007506210.1| Auxin-responsive GH3-related protein [Morganella morganii subsp.
           morganii KT]
 gi|400190971|gb|EJO24126.1| hypothetical protein MU9_3310 [Morganella morganii subsp. morganii
           KT]
 gi|455421507|gb|AGG31837.1| Auxin-responsive GH3-related protein [Morganella morganii subsp.
           morganii KT]
          Length = 512

 Score = 45.1 bits (105), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 2/85 (2%)

Query: 28  QRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPIL 87
           Q   L   L  NA+ EY Q    +  T    ++  VPL T+ +L P+I R+  G+ + +L
Sbjct: 25  QFRWLSACLAANAACEYGQRYHFSAVTSVADYQQNVPLTTYSELSPFITRMTAGEEN-LL 83

Query: 88  TGKPITTISRSSGTTQGKPKFLPFN 112
              PIT    + G+  G  K LP+ 
Sbjct: 84  CSAPITAFELTGGSHSGG-KLLPYT 107


>gi|163801302|ref|ZP_02195201.1| auxin-regulated protein [Vibrio sp. AND4]
 gi|159174791|gb|EDP59591.1| auxin-regulated protein [Vibrio sp. AND4]
          Length = 510

 Score = 44.7 bits (104), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 27/119 (22%), Positives = 60/119 (50%), Gaps = 2/119 (1%)

Query: 2   LEKMETVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKS 61
           ++ + T+   ++  +++ +  D    Q    + +++     E+ Q    +     + F+S
Sbjct: 1   MKLIHTLRYAQIKRKYKKLLNDPIIGQDNVFKTLIKSGRKTEFGQQYNFSDIRTIKDFQS 60

Query: 62  CVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTL 120
            VP+ T+E + PY+Q+I+ G+   +  GKP    + +SGTT G+ K++P   + +   L
Sbjct: 61  LVPIQTNETVAPYMQKIVQGEADILWPGKP-RYFACTSGTT-GEIKYVPVTKDSLTNQL 117


>gi|224025529|ref|ZP_03643895.1| hypothetical protein BACCOPRO_02269 [Bacteroides coprophilus DSM
           18228]
 gi|224018765|gb|EEF76763.1| hypothetical protein BACCOPRO_02269 [Bacteroides coprophilus DSM
           18228]
          Length = 501

 Score = 44.7 bits (104), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 49/91 (53%), Gaps = 2/91 (2%)

Query: 24  AERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDI 83
           AE IQ    +K+++  A  E+ +        +   F+  VP+ T+E+++ Y+ R+  G+ 
Sbjct: 25  AEAIQERVFQKLIQTAAPTEWGKKYDYARIRNYTDFQR-VPVQTYEEIKGYVDRMRHGEA 83

Query: 84  SPILTGKPITTISRSSGTTQGKPKFLPFNDE 114
             +  GK +   ++SSGTT  K KF+P + +
Sbjct: 84  DVLWPGK-VRWYAKSSGTTNDKSKFIPVSKD 113


>gi|39725440|emb|CAE45676.1| hypothetical protein [Streptomyces parvulus]
          Length = 556

 Score = 44.7 bits (104), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 78/397 (19%), Positives = 153/397 (38%), Gaps = 69/397 (17%)

Query: 24  AERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDI 83
           AER+       IL  +    + +  GL G    + ++  VP+ T+++L PY++R   G+ 
Sbjct: 32  AERV----FSDILSVSRDTGFGREHGLAGVRTRQEWRRAVPIRTYDELAPYVERQFSGER 87

Query: 84  SPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFPIGKGKALQ 143
             + T  P   + R+SG+T G+ K +P  D         +R  Y          +G AL 
Sbjct: 88  RVLTTDDPRAFL-RTSGST-GRAKLVPTTDH--------WRRVY----------RGPALY 127

Query: 144 FIYGSKQSKTKGGLNAGTATTNV-YRSSTFKAEMK-----AMQSQCCSPDEVIFGPDFHQ 197
             +G    +       G    ++ +     +  ++     ++  +  S D   + P +  
Sbjct: 128 AQWGLYFEQIGTHRLTGDEVLDLSWEPGPIRHRLRGFPVYSITERPVSDDPDDWNPPWRH 187

Query: 198 SLY----------CHLLCGLIFR---EEIQLVFSTFAHSLVHAFRTFELVWEELCDDIRE 244
           + +            LL G + R    +++L+ S     +V    T +   E L  D+ +
Sbjct: 188 ARWFTRDAGAATMADLLYGKLLRLAAHDLRLIVSVNPSKIVLLAETLKENAERLIQDLHD 247

Query: 245 GVLSSRITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYG--LIPELFPNAKYLSGIM 302
           G  + R   P                 D + +  +      G  L+ +L+P  + L    
Sbjct: 248 GHGTDRAARP-----------------DFLRRLTAAFDRTGGRPLLTDLWPGLRLLVCWN 290

Query: 303 TGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIP 362
           + S   Y   L   A  +  +      +EG +   V+  L       AV  + G+FEF+P
Sbjct: 291 SASAALYGPWLSRLATGVAALPFSTTGTEGIVTLPVDDHL--SAGPLAV--DQGHFEFVP 346

Query: 363 QRLGNLESQVLCIEPKP-VGLTEVKVGEEYEIIVTNV 398
            +  +L+      E  P +G  E+++G +Y ++++  
Sbjct: 347 WQ--DLDDGSPLPEDTPTLGYDELELGADYRLVMSQA 381


>gi|336397886|ref|ZP_08578686.1| GH3 auxin-responsive promoter [Prevotella multisaccharivorax DSM
           17128]
 gi|336067622|gb|EGN56256.1| GH3 auxin-responsive promoter [Prevotella multisaccharivorax DSM
           17128]
          Length = 525

 Score = 44.7 bits (104), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 1/96 (1%)

Query: 15  EEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPY 74
           +E +    + E++QR  L  ++ +    EY +        D   F   VP+ T+E+L+  
Sbjct: 36  KELDRHYTEPEQLQRSVLSYLVSKGMDTEYGRAHAFENIKDYTGFVKNVPINTYEELKGD 95

Query: 75  IQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLP 110
           I R+  G+ + +  G  +   ++SSGTT  K KF+P
Sbjct: 96  IDRMRHGEQNVLWPG-LVKWYAKSSGTTNDKSKFIP 130


>gi|149369370|ref|ZP_01889222.1| auxin-regulated protein [unidentified eubacterium SCB49]
 gi|149356797|gb|EDM45352.1| auxin-regulated protein [unidentified eubacterium SCB49]
          Length = 495

 Score = 44.7 bits (104), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 33/138 (23%), Positives = 66/138 (47%), Gaps = 10/138 (7%)

Query: 28  QRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPIL 87
           Q++    +L+   + ++ ++   +       F   VP+  +E L+ Y+ +++ G    + 
Sbjct: 30  QQKVFLSLLKSAENTQFGKDHHFSEIKTHADFVKQVPIRDYEQLRSYVDQVVAGKEDVLW 89

Query: 88  TGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTS-----YAFRNREFPIGKGKAL 142
            GKP+   +++SGTT G  K++P   E M T ++  R +     +   N +F  GK   +
Sbjct: 90  PGKPL-YFAKTSGTTSG-AKYIPLTKESMPTHIKAARNAILCYIHETGNADFVDGK---M 144

Query: 143 QFIYGSKQSKTKGGLNAG 160
            F+ GS +   K G+  G
Sbjct: 145 IFLQGSPEMTKKNGIGLG 162


>gi|422655790|ref|ZP_16718238.1| auxin-responsive GH3-related protein [Pseudomonas syringae pv.
           lachrymans str. M302278]
 gi|331014248|gb|EGH94304.1| auxin-responsive GH3-related protein [Pseudomonas syringae pv.
           lachrymans str. M302278]
          Length = 530

 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 2/103 (1%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           ++ ++T  +  E+ Q   LR +L  N    + +     G  +   F+  VP+ T+  LQP
Sbjct: 23  LDHWQTHFEHPEQAQERLLRGMLSANRDCAFGRVHDFAGIRNAGDFRDKVPMHTYAQLQP 82

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELM 116
           +I+R    +   +LT +P     RSSG +  + K +P+  E +
Sbjct: 83  WIER-AQHESGAVLTTRPPLFFERSSGNSALQ-KLIPYTPEFL 123


>gi|228472210|ref|ZP_04056976.1| GH3 auxin-responsive promoter family protein [Capnocytophaga
           gingivalis ATCC 33624]
 gi|228276413|gb|EEK15137.1| GH3 auxin-responsive promoter family protein [Capnocytophaga
           gingivalis ATCC 33624]
          Length = 495

 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 66/143 (46%), Gaps = 6/143 (4%)

Query: 21  TKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIID 80
            KD    Q + L  ++++  +  + +    +     E F   VP+  +E L PYI+R+ +
Sbjct: 23  AKDPIPTQEKILNSLIQKAKNTVFGKEHHFDQIHSYEDFIKQVPIRDYEALSPYIERVKE 82

Query: 81  GDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTS---YAFRNREFPIG 137
                +  GKP+   +++SGTT G  K++P   E M   +Q  R +   Y  +  +    
Sbjct: 83  AQSDILWPGKPL-YFAKTSGTTSG-AKYIPLTKESMPYHIQAARDAIMCYIAQTGKADFV 140

Query: 138 KGKALQFIYGSKQSKTKGGLNAG 160
            GK + F+ GS   + K G+  G
Sbjct: 141 NGKMI-FLQGSPILEKKNGILLG 162


>gi|88803605|ref|ZP_01119130.1| putative auxin-regulated protein [Polaribacter irgensii 23-P]
 gi|88780617|gb|EAR11797.1| putative auxin-regulated protein [Polaribacter irgensii 23-P]
          Length = 502

 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 37/160 (23%), Positives = 70/160 (43%), Gaps = 6/160 (3%)

Query: 27  IQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPI 86
           +Q+E L ++++   + E+ +            F + VP+  +E  +P I+R   G+   +
Sbjct: 31  VQKELLLQLVQTAKNTEFGKENNFAAIKSHIDFAANVPIQKYETFEPLIERCRKGE-QNL 89

Query: 87  LTGKPITTISRSSGTTQGKPKFLPFNDELME----TTLQIFRTSYAFRNREFPIGKGKAL 142
                I   ++SSGTT  K KF+P +++ +E       +     Y   N E  +  GK L
Sbjct: 90  FWPSTIKWFAKSSGTTNAKSKFIPVSEDALEYCHMKAGKDMLCHYIHNNPETHLFTGKGL 149

Query: 143 QFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQ 182
           + + GS +     G   G  +  +  +  F A+  +  SQ
Sbjct: 150 R-LGGSSEVYEDNGSYVGDLSAIIIENMPFWADYSSAPSQ 188


>gi|261878908|ref|ZP_06005335.1| GH3 auxin-responsive promoter family protein [Prevotella bergensis
           DSM 17361]
 gi|270334490|gb|EFA45276.1| GH3 auxin-responsive promoter family protein [Prevotella bergensis
           DSM 17361]
          Length = 501

 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 1/96 (1%)

Query: 15  EEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPY 74
           +E E      E +Q   L  ++ +    EY +N  L      E F   +P+ T+E+L+  
Sbjct: 16  KELEKHYSHPELLQHHVLNYLIGKGQRTEYGRNHLLGAVKTYEDFVQHIPVATYEELKGD 75

Query: 75  IQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLP 110
           I R+  G+ + +  G  +   ++SSGTT  K KF+P
Sbjct: 76  IDRMRHGEPNVLWPG-VVKCYAKSSGTTNDKSKFIP 110


>gi|374596109|ref|ZP_09669113.1| GH3 auxin-responsive promoter [Gillisia limnaea DSM 15749]
 gi|373870748|gb|EHQ02746.1| GH3 auxin-responsive promoter [Gillisia limnaea DSM 15749]
          Length = 499

 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 37/163 (22%), Positives = 74/163 (45%), Gaps = 9/163 (5%)

Query: 28  QRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPIL 87
           Q    + +++   +  + ++      +  E F   VP+  +E+L+ Y+ +++ G+   + 
Sbjct: 30  QERVFQDLIKFAKNTRFGKDHNFQNISSHEDFIKNVPVRDYEELRFYVDKMVAGEKDILW 89

Query: 88  TGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTS---YAFRNREFPIGKGKALQF 144
            GKP+   +++SGTT G  K++P   E M T +   R +   Y     +     GK + F
Sbjct: 90  PGKPL-YYAKTSGTTSG-AKYIPLTKESMPTHINAARNAILCYIAETGKADFVDGKMI-F 146

Query: 145 IYGSKQSKTKGGLNAGTATTNVYR---SSTFKAEMKAMQSQCC 184
           + GS + + K G+  G  +  V     S   K  M  +++ C 
Sbjct: 147 LQGSPELEDKNGVKLGRLSGIVAHYVPSYLQKNRMPTLETNCI 189


>gi|372222079|ref|ZP_09500500.1| GH3 auxin-responsive promoter [Mesoflavibacter zeaxanthinifaciens
           S86]
          Length = 504

 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 1/91 (1%)

Query: 27  IQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPI 86
           +Q++ LR ++      +  +          E F + VP+V +E++ P I+R   G+   +
Sbjct: 31  VQKDVLRHLITYAKHTQLGKQYDFASIKTYEDFVARVPIVQYEEVAPLIERTRKGE-QNL 89

Query: 87  LTGKPITTISRSSGTTQGKPKFLPFNDELME 117
                I   ++SSGTT  K KF+P + E +E
Sbjct: 90  FWPTNIKWFAKSSGTTNAKSKFIPVSTEALE 120


>gi|372209124|ref|ZP_09496926.1| hypothetical protein FbacS_03336 [Flavobacteriaceae bacterium S85]
          Length = 497

 Score = 44.3 bits (103), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 23/102 (22%), Positives = 54/102 (52%), Gaps = 2/102 (1%)

Query: 28  QRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPIL 87
           Q +  + +++   +  + ++   +   + + FK  VP+  +E ++ Y+ R++ G+   + 
Sbjct: 30  QEKVFQYLIKNAKNTAFGKDHQFDEIQNYKDFKERVPVNDYEGIRAYVDRMVKGESDVLW 89

Query: 88  TGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAF 129
            G+P+   +++SGTT G  K++P   E M T ++  R +  F
Sbjct: 90  KGRPL-YYAKTSGTTSG-AKYIPITKESMPTHIKAARNALLF 129


>gi|283785777|ref|YP_003365642.1| hypothetical protein ROD_20901 [Citrobacter rodentium ICC168]
 gi|282949231|emb|CBG88841.1| hypothetical protein ROD_20901 [Citrobacter rodentium ICC168]
          Length = 510

 Score = 43.9 bits (102), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 2/85 (2%)

Query: 28  QRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPIL 87
           Q   L   L  N +A Y +  G       ++F+ CVP+V +E L P+I+R++ G+   +L
Sbjct: 25  QTRWLMDCLRANQNACYGKEKGFAAIATIKAFQQCVPIVDYEMLVPWIERLVQGE-QNVL 83

Query: 88  TGKPITTISRSSGTTQGKPKFLPFN 112
               +    R+ G+  G  K +P++
Sbjct: 84  FCNDVLAFERTGGSHSGG-KLIPYS 107


>gi|260885755|ref|ZP_05735714.2| GH3 auxin-responsive promoter family protein [Prevotella tannerae
           ATCC 51259]
 gi|260852145|gb|EEX72014.1| GH3 auxin-responsive promoter family protein [Prevotella tannerae
           ATCC 51259]
          Length = 551

 Score = 43.9 bits (102), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 79/384 (20%), Positives = 145/384 (37%), Gaps = 84/384 (21%)

Query: 24  AERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDI 83
           AE IQR  L K++       +            + F   V + T+EDL+  I ++  G+ 
Sbjct: 54  AEEIQRRVLSKLIRTAEDTAFGHRNAFEDIDSYDDFARQVRVSTYEDLKDDIDKMRHGER 113

Query: 84  SPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFPIGKGKALQ 143
             +  GK +   ++SSGTT  K KF+P              T     +  +  G+   + 
Sbjct: 114 DLLWPGK-VKWYAKSSGTTNDKSKFIPV-------------TKAGLHDTHYAGGRDAVVL 159

Query: 144 FIYGSKQSK---TKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSP-DEVIFGPDFHQSL 199
           +++    S     +G +  G+   N     +   ++ A+  +  +P   ++  P+ H +L
Sbjct: 160 YLHNHPSSNFFSGRGLILGGSHAPNYNTPHSIVGDLSAILIENINPLVNLLRVPNKHTAL 219

Query: 200 YCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDI-REGVLSSRITVPSIRA 258
                                               EE  D I RE +  +  ++  + +
Sbjct: 220 LADF--------------------------------EEKRDRIARESLHKNITSISGVPS 247

Query: 259 AMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAK--YLSGIMTGSMEHYLKKLRHY 316
            M  +L+   EL        SG  N    + E++PN +  +  GI         ++L   
Sbjct: 248 WMLSVLQRVIEL--------SGKDN----LAEVWPNLEVFFHGGIAFTPYRELYRQL--- 292

Query: 317 AGDLPLMSAD----YGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQV 372
              LP  S      Y +SEG+ G   +P+   + A   +L    ++EFIP     LE +V
Sbjct: 293 ---LPTPSMHYMETYNASEGFFGLQDDPN---DAAMLLMLDYGVFYEFIP-----LE-EV 340

Query: 373 LCIEPKPVGLTEVKVGEEYEIIVT 396
              +P  + L  ++ G  Y +++T
Sbjct: 341 DSTDPTILPLWAIETGRNYALLIT 364


>gi|305665786|ref|YP_003862073.1| putative auxin-regulated protein [Maribacter sp. HTCC2170]
 gi|88710551|gb|EAR02783.1| putative auxin-regulated protein [Maribacter sp. HTCC2170]
          Length = 500

 Score = 43.9 bits (102), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 59/109 (54%), Gaps = 10/109 (9%)

Query: 57  ESFKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELM 116
           ++F   VP+  +E+L+ Y+ +++DG+ + +  GKPI   +++SGTT G  K++P     +
Sbjct: 59  DNFVKRVPIRDYEELKDYVAKVVDGNSNILWPGKPI-YFAKTSGTTSG-AKYIPITKVSI 116

Query: 117 ETTLQIFRTSY-----AFRNREFPIGKGKALQFIYGSKQSKTKGGLNAG 160
           +  ++  R +         N +F  GK   + F+ GS + + K G+  G
Sbjct: 117 KHQVEASRNAILNYIDETGNVDFVDGK---MIFLQGSPELEEKNGVKLG 162


>gi|255037581|ref|YP_003088202.1| GH3 auxin-responsive promoter [Dyadobacter fermentans DSM 18053]
 gi|254950337|gb|ACT95037.1| GH3 auxin-responsive promoter [Dyadobacter fermentans DSM 18053]
          Length = 500

 Score = 43.9 bits (102), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 2/69 (2%)

Query: 58  SFKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
            +K  VP+  +EDL+PY+++I  G+   +  GKP+   +++SGTT G  K++P + + + 
Sbjct: 60  DYKQAVPVSDYEDLKPYVEKIKSGESDILWPGKPL-YFAKTSGTTSGT-KYIPISRDSIS 117

Query: 118 TTLQIFRTS 126
             +   R +
Sbjct: 118 NHIDSARNA 126


>gi|372223852|ref|ZP_09502273.1| GH3 auxin-responsive promoter [Mesoflavibacter zeaxanthinifaciens
           S86]
          Length = 509

 Score = 43.9 bits (102), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 60/117 (51%), Gaps = 9/117 (7%)

Query: 288 IPELFPNAK-YLSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPEL 346
           I E++PN + Y SG +  + + Y K      G    +   Y +SEG+I   V P    E 
Sbjct: 238 IHEIWPNLQVYTSGGV--AFDPYQKSFNALLGKPIQIIDTYLASEGFIACQVRP----ET 291

Query: 347 ATFAVLPNIG-YFEFIPQRLGNLESQVLCIEPKP-VGLTEVKVGEEYEIIVTNVAVA 401
               ++ N G YFEF+P +   + +    ++  P +GL EV+ GE+Y +I++ V+ A
Sbjct: 292 TAMKLITNNGIYFEFVPFKPEYINTDGSLVQDAPSLGLDEVETGEDYVLIISTVSGA 348


>gi|422588528|ref|ZP_16663195.1| auxin-responsive GH3-like protein [Pseudomonas syringae pv.
           morsprunorum str. M302280]
 gi|330874965|gb|EGH09114.1| auxin-responsive GH3-like protein [Pseudomonas syringae pv.
           morsprunorum str. M302280]
          Length = 534

 Score = 43.5 bits (101), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 2/103 (1%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           +E ++T  +  E+ Q   L  +L  N    + +     G  +   F+  VP+ T+  LQP
Sbjct: 23  LEHWQTHFEHPEQAQEHLLLGMLSANRDCAFGRAHDFAGIRNASDFRDKVPMHTYAQLQP 82

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELM 116
           +I+R    +   +LT +P     RSSG +  + K +P+  E +
Sbjct: 83  WIER-AQHESGAVLTTRPPLFFERSSGNSAVQ-KLIPYTPEFL 123


>gi|402495146|ref|ZP_10841879.1| hypothetical protein AagaZ_12494 [Aquimarina agarilytica ZC1]
          Length = 498

 Score = 43.5 bits (101), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 65/136 (47%), Gaps = 6/136 (4%)

Query: 28  QRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPIL 87
           Q +  + ++E   +  + Q+   +     + F + VP+  +E L+PY+ R++ G+   + 
Sbjct: 30  QDKVFQYLIETAKNTVFGQDHQFSELKSHQDFVAKVPIRDYEALRPYVDRMVAGESDILW 89

Query: 88  TGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRT---SYAFRNREFPIGKGKALQF 144
             KP+   +++SGTT G  K++P   E M T  +  R    SY     +      K + F
Sbjct: 90  PQKPL-YYAKTSGTTSG-AKYIPITHESMPTHTEAARNAILSYINETGKADFVDNKMI-F 146

Query: 145 IYGSKQSKTKGGLNAG 160
           + GS +   K G++ G
Sbjct: 147 LQGSPELSDKNGVHLG 162


>gi|428203311|ref|YP_007081900.1| GH3 auxin-responsive promoter-binding protein [Pleurocapsa sp. PCC
           7327]
 gi|427980743|gb|AFY78343.1| GH3 auxin-responsive promoter-binding protein [Pleurocapsa sp. PCC
           7327]
          Length = 205

 Score = 43.5 bits (101), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 61/139 (43%), Gaps = 16/139 (11%)

Query: 26  RIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISP 85
           ++Q E L  +L +       +  G       E F+   P+  + +L+PYI R + G I+ 
Sbjct: 13  QLQEEFLLSLLNKFKDTAIGKERGYASIKSIEQFQEQTPIQHYSNLKPYIDRTVAGGINI 72

Query: 86  ILTGKPITTISRSSGTTQGKPKFLPFNDELME---------TTLQIFRTSYAFRNREFPI 136
                PI  I ++SGTT G PK  P+N + ++         T   I+R  Y    R   I
Sbjct: 73  FHPEPPICWI-QTSGTT-GAPKLFPYNQDFIKNWFSSSSAITNCFIYRVGY----RALKI 126

Query: 137 GKGKALQFIYGSKQSKTKG 155
            +G+A   I+ S    T G
Sbjct: 127 LEGEAF-LIHASGDCGTIG 144


>gi|302776966|ref|XP_002971592.1| hypothetical protein SELMODRAFT_28822 [Selaginella
          moellendorffii]
 gi|300160724|gb|EFJ27341.1| hypothetical protein SELMODRAFT_28822 [Selaginella
          moellendorffii]
          Length = 82

 Score = 43.5 bits (101), Expect = 0.21,   Method: Composition-based stats.
 Identities = 23/69 (33%), Positives = 38/69 (55%)

Query: 20 ITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRII 79
          IT+D   +Q   L +IL +N + +Y +  GL G    + FK  + L ++ D++  + R+ 
Sbjct: 7  ITRDVGAVQACILEQILAKNGNVKYFKRHGLCGVPCRDDFKRAMSLSSYTDIESDVTRMA 66

Query: 80 DGDISPILT 88
           GD S ILT
Sbjct: 67 SGDDSRILT 75


>gi|357398067|ref|YP_004909992.1| hypothetical protein SCAT_0447 [Streptomyces cattleya NRRL 8057 =
           DSM 46488]
 gi|337764476|emb|CCB73185.1| conserved protein of unknown function [Streptomyces cattleya NRRL
           8057 = DSM 46488]
          Length = 566

 Score = 43.1 bits (100), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 80/412 (19%), Positives = 158/412 (38%), Gaps = 79/412 (19%)

Query: 18  ETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQR 77
             + +D   +  E L  +L++     + ++  L   T    ++  VP+ ++E+L+PY++R
Sbjct: 31  RALCRDPRPVVAEVLGDLLDQARGTAFGRDHELAKVTTAAEWRRAVPIRSYEELRPYVER 90

Query: 78  IIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFPIG 137
            + G+   +    P   ++ S   + G+PK++P        T + +R  Y          
Sbjct: 91  QLAGEADVLTRSAPYAFLTTSG--SSGRPKYVP--------TTRHWRDRY---------- 130

Query: 138 KGKALQFIYGSKQSKTK-------GGLNAGTATTNVYRS------STFKAEMKAMQSQCC 184
           +G+ L   +G    +T+         L+     T V RS       +      A+ +Q  
Sbjct: 131 RGRGLYAQWGLYFERTEVFHHVADHVLDLSWERTPVSRSLHGFPVYSISRRPAAVGAQDW 190

Query: 185 SP---DEVIF----GPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEE 237
            P   D        G  +  +LY   LC L+   ++++V +     +V           E
Sbjct: 191 VPPWYDAPWLRGDDGEGYADTLY-RKLC-LLAASDVRMVVTLNPSKIVGLAEQLATRGAE 248

Query: 238 LCDDIREGVLSSR----ITVPSIRA-AMSKILKPNPELADLIHKKCSGLSNWYGLIPELF 292
           L +D+ +G +  R    +T    RA A+  +L+  PE   L                +L+
Sbjct: 249 LVEDVAKGTVCGRPEAGMTADPWRARALESVLRRRPEGLRLY---------------DLW 293

Query: 293 PNAKYLSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVN--PSLPPELATFA 350
           P    +    + S   Y   L      +P +      +EG +   V+  PS  P  A   
Sbjct: 294 PGLSLVVCWNSASAGLYRDWLEEVTPGVPKLPFSTTGTEGIVTIPVDGHPSAGPLAA--- 350

Query: 351 VLPNIGYFEFIPQRLGN----LESQVLCIEPKPVGLTEVKVGEEYEIIVTNV 398
              + G++EF+P + G+    L+     + P      E++ G  Y ++++  
Sbjct: 351 ---DQGFYEFVPYQDGDDGGPLDPWTPTLSP-----FELETGRSYRLVMSQA 394


>gi|386354107|ref|YP_006052353.1| hypothetical protein SCATT_04600 [Streptomyces cattleya NRRL 8057 =
           DSM 46488]
 gi|365804615|gb|AEW92831.1| hypothetical protein SCATT_04600 [Streptomyces cattleya NRRL 8057 =
           DSM 46488]
          Length = 553

 Score = 43.1 bits (100), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 80/412 (19%), Positives = 158/412 (38%), Gaps = 79/412 (19%)

Query: 18  ETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQR 77
             + +D   +  E L  +L++     + ++  L   T    ++  VP+ ++E+L+PY++R
Sbjct: 18  RALCRDPRPVVAEVLGDLLDQARGTAFGRDHELAKVTTAAEWRRAVPIRSYEELRPYVER 77

Query: 78  IIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFPIG 137
            + G+   +    P   ++ S   + G+PK++P        T + +R  Y          
Sbjct: 78  QLAGEADVLTRSAPYAFLTTSG--SSGRPKYVP--------TTRHWRDRY---------- 117

Query: 138 KGKALQFIYGSKQSKTK-------GGLNAGTATTNVYRS------STFKAEMKAMQSQCC 184
           +G+ L   +G    +T+         L+     T V RS       +      A+ +Q  
Sbjct: 118 RGRGLYAQWGLYFERTEVFHHVADHVLDLSWERTPVSRSLHGFPVYSISRRPAAVGAQDW 177

Query: 185 SP---DEVIF----GPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEE 237
            P   D        G  +  +LY   LC L+   ++++V +     +V           E
Sbjct: 178 VPPWYDAPWLRGDDGEGYADTLY-RKLC-LLAASDVRMVVTLNPSKIVGLAEQLATRGAE 235

Query: 238 LCDDIREGVLSSR----ITVPSIRA-AMSKILKPNPELADLIHKKCSGLSNWYGLIPELF 292
           L +D+ +G +  R    +T    RA A+  +L+  PE   L                +L+
Sbjct: 236 LVEDVAKGTVCGRPEAGMTADPWRARALESVLRRRPEGLRLY---------------DLW 280

Query: 293 PNAKYLSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVN--PSLPPELATFA 350
           P    +    + S   Y   L      +P +      +EG +   V+  PS  P  A   
Sbjct: 281 PGLSLVVCWNSASAGLYRDWLEEVTPGVPKLPFSTTGTEGIVTIPVDGHPSAGPLAA--- 337

Query: 351 VLPNIGYFEFIPQRLGN----LESQVLCIEPKPVGLTEVKVGEEYEIIVTNV 398
              + G++EF+P + G+    L+     + P      E++ G  Y ++++  
Sbjct: 338 ---DQGFYEFVPYQDGDDGGPLDPWTPTLSP-----FELETGRSYRLVMSQA 381


>gi|404406033|ref|ZP_10997617.1| GH3 auxin-responsive promoter-binding protein [Alistipes sp. JC136]
          Length = 462

 Score = 43.1 bits (100), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 1/58 (1%)

Query: 57  ESFKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDE 114
           E F+S V    +E  +PYI+R+++G  S    G+ ++  +RSSGTT  + K++P   E
Sbjct: 27  ERFQSQVETFDYETFKPYIERMMEGVRSVTYPGR-VSLFARSSGTTSDRSKYIPVTME 83


>gi|260890895|ref|ZP_05902158.1| auxin-responsive GH3-related protein [Leptotrichia hofstadii F0254]
 gi|260859448|gb|EEX73948.1| auxin-responsive GH3-related protein [Leptotrichia hofstadii F0254]
          Length = 398

 Score = 42.7 bits (99), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 25/104 (24%), Positives = 57/104 (54%), Gaps = 10/104 (9%)

Query: 26  RIQRETLRKILEENASAEYLQNLGL--------NGRTDPESFKSCVPLVTHEDLQPYIQR 77
           + Q + L +IL+ N + EYL+N           N +   E F++ +P+V +ED++ ++++
Sbjct: 48  KTQVKILLEILKTNKNTEYLKNFETGSQILNIENEKELIEKFQNKIPVVNYEDIKEFVEK 107

Query: 78  IIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQ 121
              G+ + +L+ K I     +SG+T    K++P+ ++ ++  + 
Sbjct: 108 EKSGENNVLLSDK-IKLFELTSGSTSD-VKYIPYTEKFLKNYMN 149


>gi|429742191|ref|ZP_19275838.1| GH3 auxin-responsive promoter [Porphyromonas catoniae F0037]
 gi|429157832|gb|EKY00413.1| GH3 auxin-responsive promoter [Porphyromonas catoniae F0037]
          Length = 511

 Score = 42.7 bits (99), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 24/88 (27%), Positives = 48/88 (54%), Gaps = 1/88 (1%)

Query: 23  DAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGD 82
           + E +Q + LR +L+ +    + +  GL+  T+   +   V +  +E ++  I+R+I G+
Sbjct: 25  EVEELQVKQLRHVLDRSTVTSFAKCHGLSRATNYREYAERVAVQDYEGVKADIERMIQGE 84

Query: 83  ISPILTGKPITTISRSSGTTQGKPKFLP 110
              ++ G   T  ++SSGTT  + KF+P
Sbjct: 85  RDVLIPG-VCTWYAKSSGTTSDRSKFIP 111


>gi|390953588|ref|YP_006417346.1| GH3 auxin-responsive promoter-binding protein [Aequorivita
           sublithincola DSM 14238]
 gi|390419574|gb|AFL80331.1| GH3 auxin-responsive promoter-binding protein [Aequorivita
           sublithincola DSM 14238]
          Length = 506

 Score = 42.7 bits (99), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 42/163 (25%), Positives = 69/163 (42%), Gaps = 6/163 (3%)

Query: 27  IQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPI 86
           +Q E L  +L++    E  +            F   +P+ T+E+ +  I+R   G+ S I
Sbjct: 31  VQEELLFSLLQKAKYTEIGRQYDFGSVRTYRDFAERIPITTYEENEARIERARRGE-SNI 89

Query: 87  LTGKPITTISRSSGTTQGKPKFLPFNDELME----TTLQIFRTSYAFRNREFPIGKGKAL 142
               PI   ++SSGTT  K KF+P   + +E       +     Y   N    +  GK+L
Sbjct: 90  FWPTPIKWFAKSSGTTNAKSKFIPVTIDSLEDCHYAASKDLLCMYLNNNPNANLFLGKSL 149

Query: 143 QFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCS 185
           + + GSKQ   + G   G  +  +  +  F AE  +  S   S
Sbjct: 150 R-LGGSKQLYEENGTVFGDLSAILIDNMPFWAEFSSTPSNEVS 191


>gi|89889751|ref|ZP_01201262.1| auxin regulated protein [Flavobacteria bacterium BBFL7]
 gi|89518024|gb|EAS20680.1| auxin regulated protein [Flavobacteria bacterium BBFL7]
          Length = 496

 Score = 42.7 bits (99), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 55/106 (51%), Gaps = 6/106 (5%)

Query: 58  SFKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
           +F   VP+  +E+L+P++ R++ G+   +  G+P+   +++SGTT G  K++P   E M 
Sbjct: 60  TFIDKVPVRDYEELRPFVDRVVAGESDILWPGQPL-YYAKTSGTTSGA-KYIPITKESMP 117

Query: 118 TTLQIFRT---SYAFRNREFPIGKGKALQFIYGSKQSKTKGGLNAG 160
             ++  R    SY     +      K + F+ GS + + K G+  G
Sbjct: 118 EHVKAARNAILSYIHETGKATFVDHKMI-FLQGSPEMEDKNGVQLG 162


>gi|392592270|gb|EIW81597.1| hypothetical protein CONPUDRAFT_154129 [Coniophora puteana
           RWD-64-598 SS2]
          Length = 580

 Score = 42.4 bits (98), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 56/126 (44%), Gaps = 4/126 (3%)

Query: 211 EEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPSIRAAMSKILKPNPEL 270
           + + LV+ST   + V  FR  +  WE L   I  G L        + A ++     NP+ 
Sbjct: 242 DTLALVWST---ATVDFFRWIDEEWETLIGAIDSGKLPQYPQTEHVYAGIATQFHANPKR 298

Query: 271 ADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRHYAG-DLPLMSADYGS 329
           A+ + K         G  P+++P    L  I TG+    L ++R Y G D+ +    Y S
Sbjct: 299 AEELRKIGPPSLTAEGWAPKVWPKLGLLVAICTGTFARVLPQVRAYIGPDVLIRVPMYAS 358

Query: 330 SEGWIG 335
           +E ++G
Sbjct: 359 TECFMG 364


>gi|372220757|ref|ZP_09499178.1| GH3 auxin-responsive promoter [Mesoflavibacter zeaxanthinifaciens
           S86]
          Length = 498

 Score = 42.4 bits (98), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 29/108 (26%), Positives = 56/108 (51%), Gaps = 10/108 (9%)

Query: 58  SFKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME 117
            F   VP+  +E+L+PY+++I++G    +  GKP+   +++SGTT G  K++P     ++
Sbjct: 60  DFVKQVPIRDYEELKPYVEQILEGKKDVLWPGKPL-YFAKTSGTTSG-AKYIPITKPSIK 117

Query: 118 TTLQIFRTS-----YAFRNREFPIGKGKALQFIYGSKQSKTKGGLNAG 160
             +   R +         N +F  G+   + F+ GS + + K G+  G
Sbjct: 118 NQVNASRDAILNYIQETGNADFVDGR---MIFLQGSPEMEEKNGIKLG 162


>gi|406883160|gb|EKD30807.1| hypothetical protein ACD_77C00476G0010 [uncultured bacterium]
          Length = 510

 Score = 42.4 bits (98), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 75/160 (46%), Gaps = 6/160 (3%)

Query: 23  DAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGD 82
           D    QRE   +IL+  ++  + ++   +  +    F+   PL+ ++ ++PYI R+  G+
Sbjct: 25  DPWSFQREWFDRILKSGSNTSFGKDHNFSSVSTIPQFQKTAPLMDYDKIEPYINRVRQGE 84

Query: 83  ISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETT----LQIFRTSYAFRNREFPIGK 138
              +L    I   ++SSGT+  K KF+P   E + T     +Q    +Y  +N +  +  
Sbjct: 85  -DNVLWDSKIKWFAKSSGTSSSKSKFIPITSESLSTCHYDGMQNMLATYVSQNSQSGLLS 143

Query: 139 GKALQFIYGSKQS-KTKGGLNAGTATTNVYRSSTFKAEMK 177
           G AL     +K     KGG   G  +  + ++S   AE++
Sbjct: 144 GMALTLGGSAKTDLAGKGGTQCGDLSAILLKNSPSIAELR 183


>gi|312884848|ref|ZP_07744540.1| hypothetical protein VIBC2010_04087 [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309367500|gb|EFP95060.1| hypothetical protein VIBC2010_04087 [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 513

 Score = 42.4 bits (98), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 25/103 (24%), Positives = 54/103 (52%), Gaps = 2/103 (1%)

Query: 12  ELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDL 71
           ++  +++ +  D    Q +  + +++     ++ Q    +     + F+S VP+ T+E +
Sbjct: 11  QIKRKYKKLINDPISGQDKVFKTLIKSGKKTQFGQQHHFSKIHTVKDFQSYVPIQTNETV 70

Query: 72  QPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDE 114
            PY+ RI++G+   +  GKP    + +SGTT G+ K++P   E
Sbjct: 71  APYMGRIVEGEADVLWPGKP-RYFACTSGTT-GEIKYVPVTRE 111


>gi|301385136|ref|ZP_07233554.1| auxin-responsive GH3-related protein [Pseudomonas syringae pv.
           tomato Max13]
 gi|302134099|ref|ZP_07260089.1| auxin-responsive GH3-related protein [Pseudomonas syringae pv.
           tomato NCPPB 1108]
          Length = 534

 Score = 42.0 bits (97), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 49/103 (47%), Gaps = 2/103 (1%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           ++ ++T  +  E+ Q   L  +L  N    + +     G  +   F+  VP+ T+  LQP
Sbjct: 23  LDHWQTHFEHPEQAQERLLLGMLSANRDCAFGRAHDFAGIRNASDFRDKVPMHTYAQLQP 82

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELM 116
           +I+R    +   +LT +P     RSSG +  + K +P+  E +
Sbjct: 83  WIERARH-ESGAVLTTRPPLFFERSSGNSALQ-KLIPYTPEFL 123


>gi|255536478|ref|YP_003096849.1| auxin-regulated protein [Flavobacteriaceae bacterium 3519-10]
 gi|255342674|gb|ACU08787.1| putative auxin-regulated protein [Flavobacteriaceae bacterium
           3519-10]
          Length = 501

 Score = 41.6 bits (96), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 65/148 (43%), Gaps = 10/148 (6%)

Query: 18  ETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQR 77
           ET   +A   Q++ L  +++      + +            F+  V +  +EDL+PYI++
Sbjct: 22  ETFKNNAVEDQQKLLLSLVKTAEKTLFGRERNFENINSVHDFQKNVQIADYEDLKPYIEK 81

Query: 78  IIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTL-----QIFRTSYAFRNR 132
           +  G  + + T  P    +++SGTT G  K++P + E M   L      IF       N 
Sbjct: 82  VKKGQRNILWTETP-EYFAKTSGTTSGS-KYIPISKEGMPYQLAAAQSAIFHYISQKNNS 139

Query: 133 EFPIGKGKALQFIYGSKQSKTKGGLNAG 160
            F  GK   + F+ GS + +   G+  G
Sbjct: 140 SFVAGK---MIFLQGSPELEEINGIKTG 164


>gi|383452296|ref|YP_005366285.1| hypothetical protein COCOR_00277 [Corallococcus coralloides DSM
           2259]
 gi|380727383|gb|AFE03385.1| hypothetical protein COCOR_00277 [Corallococcus coralloides DSM
           2259]
          Length = 547

 Score = 41.6 bits (96), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 10/158 (6%)

Query: 16  EFETITKDAERIQRETLRKIL---EENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQ 72
            F    ++ E  Q E L +IL   E  A AE +Q+     RT  E F+  VP+ T + + 
Sbjct: 15  RFRHALREPEDAQAECLMRILRAVEGTAQAERVQHFD-RIRTAWE-FQDAVPITTPDSVA 72

Query: 73  PYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELM-ETTLQIFRTSYAFRN 131
             + RI  GD   +LT +P+     S G++ G  K +P    L+ E    +    +    
Sbjct: 73  EDVDRIARGDAR-VLTREPVLRFELSGGSS-GASKRVPVTQGLLREFQRALAPMLHEVFL 130

Query: 132 REFPIGKGKALQFI--YGSKQSKTKGGLNAGTATTNVY 167
           R   + +G +   I   G +Q +T GG+  G+A  + +
Sbjct: 131 RRPAVREGPSYWSISPLGRRQHRTAGGIPVGSAEDSAW 168


>gi|332663679|ref|YP_004446467.1| GH3 auxin-responsive promoter [Haliscomenobacter hydrossis DSM
           1100]
 gi|332332493|gb|AEE49594.1| GH3 auxin-responsive promoter [Haliscomenobacter hydrossis DSM
           1100]
          Length = 500

 Score = 41.6 bits (96), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 69/153 (45%), Gaps = 18/153 (11%)

Query: 22  KDAERIQRETLRKILEENASAEYLQNLGLN-------GRTDPESFKSC---VPLVTHEDL 71
           K A  I+R + R +LE+    + L   G N       G     S++     VP+  +E +
Sbjct: 14  KIARDIRRWSARAVLEQEQIFKQLLATGKNTAFGKAHGFEQIRSYQDYIERVPIRDYEGI 73

Query: 72  QPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRN 131
           +PYI+RI  G+   +  G+P    +++SGTT G  K++P +++ +       R   A  N
Sbjct: 74  KPYIERIKAGESDVLWKGRP-AYFAKTSGTTSGV-KYIPISNQSIPNHFGSARN--ALFN 129

Query: 132 REFPIGKGKALQ----FIYGSKQSKTKGGLNAG 160
                G G+ L     F+ GS +     G+  G
Sbjct: 130 YYAQTGNGQWLDGKVIFLSGSPELTETAGIPTG 162


>gi|74180792|dbj|BAE25606.1| unnamed protein product [Mus musculus]
          Length = 532

 Score = 41.2 bits (95), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 41/186 (22%), Positives = 78/186 (41%), Gaps = 26/186 (13%)

Query: 213 IQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPSIRAAMSKILKPNPELAD 272
           ++++ +  A  L+  F   E   EEL + I  G+L +   +P   A + + L+  P    
Sbjct: 196 LRVLEARTAVELLDVFVGLEADGEELAEAIAAGILGT--LLPKRAAELKEALEQGPR--- 250

Query: 273 LIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLR-HYAGDLPLMSADYGSSE 331
                        GL   L+P  + +  + +G     +  LR  +   L   S  Y +S 
Sbjct: 251 -------------GLARRLWPKLQVVVTLDSGGQAEAVAALRVLWCQGLAFFSPAYAASG 297

Query: 332 GWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEY 391
           G +  N+ P  P    ++ + P + + E +P + G  E          + LT+ +  +EY
Sbjct: 298 GVVALNLWPERPQ--GSYLLPPGVPFIELLPIKEGTQEEAA-----STLLLTDAQREKEY 350

Query: 392 EIIVTN 397
           E+++TN
Sbjct: 351 ELVLTN 356


>gi|357432066|gb|AET78710.1| At2g23170-like protein [Arabidopsis halleri]
          Length = 149

 Score = 41.2 bits (95), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 18/53 (33%), Positives = 34/53 (64%), Gaps = 7/53 (13%)

Query: 347 ATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
            ++ ++PN+ YFEF+P  +   +S++       V L +V+VG+EYE+++T  A
Sbjct: 1   VSYTIMPNMAYFEFLPHEVPTGKSEL-------VELADVEVGKEYELVITTYA 46


>gi|13994199|ref|NP_114077.1| GH3 domain-containing protein precursor [Mus musculus]
 gi|341940744|sp|Q99J23.2|GHDC_MOUSE RecName: Full=GH3 domain-containing protein; Flags: Precursor
 gi|13194580|gb|AAK15471.1| unknown [Mus musculus]
 gi|13194584|gb|AAK15473.1| unknown [Mus musculus]
          Length = 532

 Score = 41.2 bits (95), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 41/186 (22%), Positives = 78/186 (41%), Gaps = 26/186 (13%)

Query: 213 IQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPSIRAAMSKILKPNPELAD 272
           ++++ +  A  L+  F   E   EEL + I  G+L +   +P   A + + L+  P    
Sbjct: 196 LRVLEARTAVELLDVFVGLEADGEELAEAIAAGILGT--LLPKRAAELKEALEQGPR--- 250

Query: 273 LIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLR-HYAGDLPLMSADYGSSE 331
                        GL   L+P  + +  + +G     +  LR  +   L   S  Y +S 
Sbjct: 251 -------------GLARRLWPKLQVVVTLDSGGQAEAVAALRVLWCQGLAFFSPAYAASG 297

Query: 332 GWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEY 391
           G +  N+ P  P    ++ + P + + E +P + G  E          + LT+ +  +EY
Sbjct: 298 GVVALNLWPERPQ--GSYLLPPGVPFIELLPIKEGTQEEAA-----STLLLTDAQREKEY 350

Query: 392 EIIVTN 397
           E+++TN
Sbjct: 351 ELVLTN 356


>gi|74179699|dbj|BAE22488.1| unnamed protein product [Mus musculus]
          Length = 532

 Score = 41.2 bits (95), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 41/186 (22%), Positives = 78/186 (41%), Gaps = 26/186 (13%)

Query: 213 IQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPSIRAAMSKILKPNPELAD 272
           ++++ +  A  L+  F   E   EEL + I  G+L +   +P   A + + L+  P    
Sbjct: 196 LRVLEARTAVELLDVFVGLEADGEELAEAIAAGILGT--LLPKRAAELKEALEQGPR--- 250

Query: 273 LIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLR-HYAGDLPLMSADYGSSE 331
                        GL   L+P  + +  + +G     +  LR  +   L   S  Y +S 
Sbjct: 251 -------------GLARRLWPKLQVVVTLDSGGQAEAVAALRVLWCQGLAFFSPAYAASG 297

Query: 332 GWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEY 391
           G +  N+ P  P    ++ + P + + E +P + G  E          + LT+ +  +EY
Sbjct: 298 GVVALNLWPERPQ--GSYLLPPGVPFIELLPIKEGTQEEAA-----STLLLTDAQREKEY 350

Query: 392 EIIVTN 397
           E+++TN
Sbjct: 351 ELVLTN 356


>gi|392587268|gb|EIW76602.1| hypothetical protein CONPUDRAFT_63859 [Coniophora puteana
           RWD-64-598 SS2]
          Length = 411

 Score = 41.2 bits (95), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 1/126 (0%)

Query: 219 TFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPSIRAAMSKILKPNPELADLIHKKC 278
           T++ +LV   R  E  WE L + +  G L        + + +      +P+ A+ + K  
Sbjct: 70  TWSTALVDFVRWIEEEWETLLNGLSVGKLPQFPETDDVYSVIMTKFHADPDRAEQLRKIG 129

Query: 279 SGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRHYAG-DLPLMSADYGSSEGWIGAN 337
                  G + +++PN + LS + TG+    L ++R Y G D+ +    YG +E +I   
Sbjct: 130 PPSRTAEGWLKKVWPNLELLSAVCTGTFARVLPQVRAYVGPDVIIRVPMYGCTECFISLA 189

Query: 338 VNPSLP 343
            +   P
Sbjct: 190 YHDQYP 195


>gi|357432068|gb|AET78711.1| At2g23170-like protein [Arabidopsis halleri]
 gi|357432076|gb|AET78715.1| At2g23170-like protein [Arabidopsis halleri]
 gi|357432084|gb|AET78719.1| At2g23170-like protein [Arabidopsis halleri]
 gi|357432086|gb|AET78720.1| At2g23170-like protein [Arabidopsis halleri]
 gi|357432088|gb|AET78721.1| At2g23170-like protein [Arabidopsis halleri]
 gi|357432090|gb|AET78722.1| At2g23170-like protein [Arabidopsis halleri]
 gi|357432092|gb|AET78723.1| At2g23170-like protein [Arabidopsis halleri]
 gi|357432094|gb|AET78724.1| At2g23170-like protein [Arabidopsis halleri]
 gi|357432096|gb|AET78725.1| At2g23170-like protein [Arabidopsis halleri]
 gi|357432098|gb|AET78726.1| At2g23170-like protein [Arabidopsis halleri]
 gi|357432100|gb|AET78727.1| At2g23170-like protein [Arabidopsis halleri]
 gi|357432102|gb|AET78728.1| At2g23170-like protein [Arabidopsis halleri]
 gi|357432104|gb|AET78729.1| At2g23170-like protein [Arabidopsis halleri]
 gi|357432106|gb|AET78730.1| At2g23170-like protein [Arabidopsis halleri]
 gi|357432108|gb|AET78731.1| At2g23170-like protein [Arabidopsis halleri]
 gi|357432110|gb|AET78732.1| At2g23170-like protein [Arabidopsis halleri]
 gi|357432112|gb|AET78733.1| At2g23170-like protein [Arabidopsis halleri]
 gi|357432114|gb|AET78734.1| At2g23170-like protein [Arabidopsis halleri]
 gi|357432116|gb|AET78735.1| At2g23170-like protein [Arabidopsis halleri]
 gi|357432118|gb|AET78736.1| At2g23170-like protein [Arabidopsis halleri]
          Length = 149

 Score = 41.2 bits (95), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 18/53 (33%), Positives = 34/53 (64%), Gaps = 7/53 (13%)

Query: 347 ATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
            ++ ++PN+ YFEF+P  +   +S++       V L +V+VG+EYE+++T  A
Sbjct: 1   VSYTIMPNMAYFEFLPHEVPTGKSEL-------VELADVEVGKEYELVITTYA 46


>gi|13542889|gb|AAH05639.1| GH3 domain containing [Mus musculus]
          Length = 532

 Score = 41.2 bits (95), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 41/186 (22%), Positives = 78/186 (41%), Gaps = 26/186 (13%)

Query: 213 IQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPSIRAAMSKILKPNPELAD 272
           ++++ +  A  L+  F   E   EEL + I  G+L +   +P   A + + L+  P    
Sbjct: 196 LRVLEARTAVELLDVFVGLEADGEELAEAIAAGILGT--LLPKRAAELKEALEQGPR--- 250

Query: 273 LIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLR-HYAGDLPLMSADYGSSE 331
                        GL   L+P  + +  + +G     +  LR  +   L   S  Y +S 
Sbjct: 251 -------------GLARRLWPKLQVVVTLDSGGQAEAVAALRVLWCQGLAFFSPAYAASG 297

Query: 332 GWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEY 391
           G +  N+ P  P    ++ + P + + E +P + G  E          + LT+ +  +EY
Sbjct: 298 GVVALNLWPERPQ--GSYLLPPGVPFIELLPIKEGTQEEAA-----STLLLTDAQREKEY 350

Query: 392 EIIVTN 397
           E+++TN
Sbjct: 351 ELVLTN 356


>gi|357432070|gb|AET78712.1| At2g23170-like protein [Arabidopsis halleri]
 gi|357432072|gb|AET78713.1| At2g23170-like protein [Arabidopsis halleri]
 gi|357432074|gb|AET78714.1| At2g23170-like protein [Arabidopsis halleri]
 gi|357432078|gb|AET78716.1| At2g23170-like protein [Arabidopsis halleri]
 gi|357432080|gb|AET78717.1| At2g23170-like protein [Arabidopsis halleri]
 gi|357432082|gb|AET78718.1| At2g23170-like protein [Arabidopsis halleri]
          Length = 149

 Score = 41.2 bits (95), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 18/53 (33%), Positives = 34/53 (64%), Gaps = 7/53 (13%)

Query: 347 ATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
            ++ ++PN+ YFEF+P  +   +S++       V L +V+VG+EYE+++T  A
Sbjct: 1   VSYTIMPNMAYFEFLPHEVPTGKSEL-------VELADVEVGKEYELVITTYA 46


>gi|78061590|ref|YP_371498.1| auxin-responsive GH3-related protein [Burkholderia sp. 383]
 gi|77969475|gb|ABB10854.1| Auxin-responsive GH3-related protein [Burkholderia sp. 383]
          Length = 532

 Score = 41.2 bits (95), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 33/154 (21%), Positives = 63/154 (40%), Gaps = 5/154 (3%)

Query: 28  QRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPIL 87
           Q   L  +L  N    + +  G +    P  F+  VP+    D  P++ R +  +  P+L
Sbjct: 37  QARRLTALLAANRDTAFGRRFGFDRIDSPAQFRERVPVHAAADFLPWLDR-VSHETEPVL 95

Query: 88  TGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP-IGKGKALQFIY 146
           T +    + R+SG+T  + K +P+    +           A   R  P +G+G+A   + 
Sbjct: 96  TAERPVFLERTSGST-ARQKLIPYTPAFLRELQAAMTVWLADMYRACPALGEGRAYWSMS 154

Query: 147 GSKQSK--TKGGLNAGTATTNVYRSSTFKAEMKA 178
              Q+      G+  G+A+   Y   +  A + +
Sbjct: 155 PPLQAPGVAPNGIPVGSASDLDYLGDSSAAALAS 188


>gi|262340895|ref|YP_003283750.1| hypothetical protein BLBBGE_109 [Blattabacterium sp. (Blattella
           germanica) str. Bge]
 gi|262272232|gb|ACY40140.1| hypothetical protein BLBBGE_109 [Blattabacterium sp. (Blattella
           germanica) str. Bge]
          Length = 505

 Score = 41.2 bits (95), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 1/97 (1%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           I+  E   +    IQ + + +++      E+ +  G +     + F   +PL  + DL+ 
Sbjct: 18  IKNIEFFMRYPIEIQNQLMNQLILYAKDTEFGKKYGFHDIKRYQQFSERIPLCKYADLKS 77

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLP 110
            I+RI  G+ + +  G  +   ++SSGTT  K K++P
Sbjct: 78  VIKRIRRGEKNILWPG-TVKWFAKSSGTTNTKSKYIP 113


>gi|410087452|ref|ZP_11284156.1| Auxin-responsive GH3-related protein [Morganella morganii SC01]
 gi|409766187|gb|EKN50283.1| Auxin-responsive GH3-related protein [Morganella morganii SC01]
          Length = 512

 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 2/85 (2%)

Query: 28  QRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPIL 87
           Q   L   L  NA+ EY Q    +       ++  VPL T+ DL  +I R+  G+ + +L
Sbjct: 25  QFRWLSACLAANAACEYGQRYHFSAVKSVADYQQNVPLTTYSDLSSFITRMTAGEEN-LL 83

Query: 88  TGKPITTISRSSGTTQGKPKFLPFN 112
              P+T    + G+  G  K LP+ 
Sbjct: 84  CSAPVTAFELTGGSHSGG-KLLPYT 107


>gi|376317308|emb|CCG00675.1| GH3 auxin-responsive promoter [uncultured Flavobacteriia bacterium]
          Length = 498

 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 36/160 (22%), Positives = 70/160 (43%), Gaps = 6/160 (3%)

Query: 27  IQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPI 86
           +Q E L K++    + E  +    +   +   F + VP+  +E  +P ++R   G+   +
Sbjct: 50  VQNELLLKLIHTARNTELGKANKFSSIKNHSDFVANVPIQKYETFEPLMERCRKGE-QNL 108

Query: 87  LTGKPITTISRSSGTTQGKPKFLPFNDELME----TTLQIFRTSYAFRNREFPIGKGKAL 142
                I   ++SSGTT  K KF+P +D+ ++       +    +Y   N    +  GK L
Sbjct: 109 FWPSNIEWFAKSSGTTNAKSKFIPVSDDALKYCHMKAGKDMLCNYIENNPNTQLFTGKGL 168

Query: 143 QFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQ 182
           + + GS +     G + G  +  +  +  F A+  +  SQ
Sbjct: 169 R-LGGSSEVYQDNGTHFGDLSAIIIENMPFWADFSSAPSQ 207


>gi|311747105|ref|ZP_07720890.1| hypothetical protein ALPR1_12175 [Algoriphagus sp. PR1]
 gi|126578810|gb|EAZ82974.1| hypothetical protein ALPR1_12175 [Algoriphagus sp. PR1]
          Length = 506

 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 62/117 (52%), Gaps = 9/117 (7%)

Query: 288 IPELFPNAK-YLSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNP-SLPPE 345
           I E++PN + Y SG +  + E Y +      G    +   Y +SEG+I     P S+  +
Sbjct: 239 IHEIWPNFQVYASGGV--AFETYREDFNAICGKPITIMDTYLASEGFISYTGTPGSMDMK 296

Query: 346 LATFAVLPNIGYFEFIP-QRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVAVA 401
           +A    L +  +FEFIP    G  E+  L  EP  +G+ EV+VG+EY +I+++ A A
Sbjct: 297 MA----LEHGYFFEFIPFDERGINETGELLDEPLVLGIDEVEVGQEYVLILSSCAGA 349


>gi|225010437|ref|ZP_03700908.1| GH3 auxin-responsive promoter [Flavobacteria bacterium MS024-3C]
 gi|225005266|gb|EEG43217.1| GH3 auxin-responsive promoter [Flavobacteria bacterium MS024-3C]
          Length = 502

 Score = 40.8 bits (94), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 43/190 (22%), Positives = 81/190 (42%), Gaps = 11/190 (5%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           + + E   K    +Q E L  +++     E  ++       +   F + VP+  +E ++ 
Sbjct: 18  LHQIEFFLKYPIEVQEELLMGLVDFAKDTEIGKSFDFRSIKNYSDFAARVPITNYEGMEH 77

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELME----TTLQIFRTSYAF 129
            I +   G  + +    PI   ++SSGTT  K KF+P + E +E     + +   + Y  
Sbjct: 78  LIDQARRG-TANLFWPTPIKWFAKSSGTTNAKSKFIPVSQESLEDCHYKSSKDLLSIYLN 136

Query: 130 RNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEV 189
            N    +  GK+L+ + GSK+     G   G  +  +  +  F AE  +  S     ++V
Sbjct: 137 NNENSQLFTGKSLR-LGGSKELYESHGSVFGDLSAILIDNMPFWAEFSSTPS-----NKV 190

Query: 190 IFGPDFHQSL 199
              PD++  L
Sbjct: 191 SLMPDWNTKL 200


>gi|355568700|gb|EHH24981.1| GH3 domain-containing protein [Macaca mulatta]
          Length = 529

 Score = 40.8 bits (94), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 8/115 (6%)

Query: 286 GLIPELFPNAKYLSGIMTGSMEHYLKKLRH-YAGDLPLMSADYGSSEGWIGANVNPSLPP 344
           GL   L+P  + +  +  G     +  LR  +   L   S  Y +S G +G N+ P  P 
Sbjct: 249 GLALRLWPKLQVVVTLDAGGQAEAVAALRALWCQGLAFFSPAYAASGGVLGLNLQPEQPY 308

Query: 345 ELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
            L  + + P   + E +P + G  E     +      LTE + G+EYE+++T+ A
Sbjct: 309 GL--YLLPPGAPFIELLPVKEGTQEEAASTLL-----LTEAQQGKEYELVLTDHA 356


>gi|289674034|ref|ZP_06494924.1| auxin-responsive GH3-related protein, partial [Pseudomonas syringae
           pv. syringae FF5]
          Length = 85

 Score = 40.8 bits (94), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 2/65 (3%)

Query: 52  GRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPF 111
           G  D E F+  VP+ T+  LQP+I R    +  PILT  P     RSSG +  + K +P+
Sbjct: 6   GIRDSEEFRKRVPIHTYAQLQPWIGR-AQHEQGPILTASPPLFFERSSGNSAVQ-KHIPY 63

Query: 112 NDELM 116
             E +
Sbjct: 64  TQEFL 68


>gi|380817248|gb|AFE80498.1| GH3 domain-containing protein isoform 1 [Macaca mulatta]
 gi|383422207|gb|AFH34317.1| GH3 domain-containing protein isoform 1 [Macaca mulatta]
          Length = 529

 Score = 40.8 bits (94), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 8/115 (6%)

Query: 286 GLIPELFPNAKYLSGIMTGSMEHYLKKLRH-YAGDLPLMSADYGSSEGWIGANVNPSLPP 344
           GL   L+P  + +  +  G     +  LR  +   L   S  Y +S G +G N+ P  P 
Sbjct: 249 GLALRLWPKLQVVVTLDAGGQAEAVAALRALWCQGLAFFSPAYAASGGVLGLNLQPEQPY 308

Query: 345 ELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA 399
            L  + + P   + E +P + G  E     +      LTE + G+EYE+++T+ A
Sbjct: 309 GL--YLLPPGAPFIELLPVKEGTQEEAASTLL-----LTEAQQGKEYELVLTDHA 356


>gi|296139260|ref|YP_003646503.1| hypothetical protein [Tsukamurella paurometabola DSM 20162]
 gi|296027394|gb|ADG78164.1| hypothetical protein Tpau_1542 [Tsukamurella paurometabola DSM
           20162]
          Length = 128

 Score = 40.8 bits (94), Expect = 1.4,   Method: Composition-based stats.
 Identities = 23/88 (26%), Positives = 46/88 (52%), Gaps = 2/88 (2%)

Query: 23  DAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGD 82
           D    Q++ L  IL++     +  +  L+       +++ VP+ +++D +PY+QR   G+
Sbjct: 29  DPAGAQQQVLADILDQATETSFGVDHALSSVRTLADWRAAVPVRSYDDFRPYLQRAQAGE 88

Query: 83  ISPILTGKPITTISRSSGTTQGKPKFLP 110
              + T  P   + ++SGT+ G PK +P
Sbjct: 89  RRVLTTCDPYAFL-KTSGTS-GAPKLVP 114


>gi|336365639|gb|EGN93989.1| hypothetical protein SERLA73DRAFT_189145 [Serpula lacrymans var.
           lacrymans S7.3]
          Length = 541

 Score = 40.8 bits (94), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 78/372 (20%), Positives = 146/372 (39%), Gaps = 52/372 (13%)

Query: 56  PESFKSCVPLV---THEDLQPYIQRIID-----GDISPILTGKPITTISRSSGTTQGKPK 107
           P S   C P++    ++D  P++ R+ +      ++  ++       I+ SSGT+ G  K
Sbjct: 16  PSSMVPC-PILHPSVYKDYHPFVSRLFEEPCTVSNVENLMAPGIPYFIAHSSGTSNGVTK 74

Query: 108 FLP--FNDELMETTLQIFRTSYAFRNREFPIGKGKALQFIYGSKQS----KTKGGLN--- 158
             P   + E M T+      + A  N     G    + F  G +Q       +G +    
Sbjct: 75  HFPKYRHPEHMSTSTA---GTMAASNPVSKHGGKNCIAFSLGHRQVVQPLDHEGNIARRI 131

Query: 159 ----AGTATTNVYRSSTFKAEMKAMQS----QCCSPDEVIFGPDFHQSLYCHLLCGLIFR 210
                 T T  ++     + + +  QS       SP  V + P++   L+ H L  L   
Sbjct: 132 PVCLMSTGTVRMHNDMAVERD-QIYQSIRIPNNSSPLAVSYIPNYKSFLFMHALFALQ-E 189

Query: 211 EEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREG-VLSSRITVPSIRAAMSKILKPNPE 269
             ++L+ + F+       R  E  WE L   I +G V     T P I         PNPE
Sbjct: 190 PNMELINTMFSTIFRDFCRVIEEQWETLVQCIEDGNVPELEATGPFIENLRRLFGGPNPE 249

Query: 270 LADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRHYAG-DLPLMSADYG 328
            A+ + +     ++  G + +++P  + +  I +G     + +  H+ G D+ + +    
Sbjct: 250 RANYL-RTIGKATDEPGWLKKIWPGLRTIVAISSGPFITVVPECHHFIGPDVVMQTLGIN 308

Query: 329 SSEGWIGANVNPSLPPELATFAVLPNIGYFEFI----PQRLGNLESQVLCIEPKPVGLTE 384
            SE ++    +   P   + + V+ +    EF+    P+   +L                
Sbjct: 309 CSEAFLALAYDSRDP---SLYKVVGSDEIIEFLNVNEPEEAKSLTQT-----------WN 354

Query: 385 VKVGEEYEIIVT 396
           VK+GE+YE+I+T
Sbjct: 355 VKLGEKYEVILT 366


>gi|443731518|gb|ELU16623.1| hypothetical protein CAPTEDRAFT_191927 [Capitella teleta]
          Length = 249

 Score = 40.4 bits (93), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 1/95 (1%)

Query: 17  FETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQ 76
           F + +KD  + Q  TL + ++EN+   Y ++   +   + + F    PL  +E  + YI 
Sbjct: 63  FNSYSKDCVKTQESTLLQFIKENSDTIYGRDHSFSQIHNRDDFVRLHPLTIYEHYESYID 122

Query: 77  RIIDGDISPILTGKPITTISRSSGTTQGKPKFLPF 111
           R+ +G+ + I    P      +SGT+       PF
Sbjct: 123 RVYNGEENVITKAMP-AMFGVTSGTSGEDTTVTPF 156


>gi|392596817|gb|EIW86139.1| hypothetical protein CONPUDRAFT_45881 [Coniophora puteana
           RWD-64-598 SS2]
          Length = 359

 Score = 40.0 bits (92), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 10/129 (7%)

Query: 211 EEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPSIRAAMSKILKPNPEL 270
           + + ++FST   + V   R+ E  W+ L D I  G L        I  A++ I + + + 
Sbjct: 16  DTLSMMFST---TFVDFIRSIEKEWDTLIDAIASGQLPCFPNTEHIYHAIAPIFRGDADR 72

Query: 271 ADLIHK---KCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRHYAG-DLPLMSAD 326
           A  + K        S W  L+   +PN   L  + TG     L ++R Y G D+ + +  
Sbjct: 73  AGELRKIGPPSQTASGWAKLV---WPNLDLLCSVCTGGFGRVLPQVRGYLGSDVAIRNPT 129

Query: 327 YGSSEGWIG 335
           Y S+E  +G
Sbjct: 130 YTSTECTMG 138


>gi|188475804|gb|ACD50066.1| putative auxin-regulated protein [uncultured crenarchaeote MCG]
          Length = 380

 Score = 40.0 bits (92), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 31/133 (23%), Positives = 59/133 (44%), Gaps = 10/133 (7%)

Query: 22  KDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDG 81
           ++ E+ Q++TL  +L++  S +Y +          E ++   P++ +  L PY+  I +G
Sbjct: 24  ENPEKAQQQTLIDLLKKYCSTDYGKRHNAIQTRAVEDYQRNFPIIDYAGLVPYLAEIKNG 83

Query: 82  DISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFR------TSYAFRNREFP 135
           +   IL  +P  +   + G+T    K LP     ++   QIF         +A R + F 
Sbjct: 84  NYQTIL-AEPAVSWVMTRGSTAKTSKVLPATQTHLK---QIFTCGARALIHFALRKKNFE 139

Query: 136 IGKGKALQFIYGS 148
           +  G  L   + S
Sbjct: 140 VFTGNILNLNFPS 152


>gi|223935841|ref|ZP_03627756.1| GH3 auxin-responsive promoter [bacterium Ellin514]
 gi|223895442|gb|EEF61888.1| GH3 auxin-responsive promoter [bacterium Ellin514]
          Length = 501

 Score = 39.7 bits (91), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 85/355 (23%), Positives = 137/355 (38%), Gaps = 48/355 (13%)

Query: 59  FKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELM-E 117
           F   VPL  ++ L P+I RI  G+   +LT +P+T +  +SGTT G  K +PF   L  E
Sbjct: 20  FAEKVPLTDYDALLPWIDRIRQGE-QCVLTNEPVTHLVPTSGTT-GARKLIPFTKGLQRE 77

Query: 118 TTLQIFRTSYAFRNREFPIGKGKALQFIYGS---KQSKTKG---GLNAGTATTNVYRSST 171
               I       +++   +  G A   I  +   KQ++T     G  A TA     R   
Sbjct: 78  FNAAIGPWLIDLQSQAPGLLGGPAYWSITPAIRPKQAETSVVPIGFEADTAYLGGIRKKL 137

Query: 172 FKAEMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTF 231
             A M A+ S     D +       ++     L  L+   E++L+       L       
Sbjct: 138 VDAVM-AVGSWVQHADSI-------EAFRYITLLALLRCPELRLISIWHPSFLSLLLDGL 189

Query: 232 ELVWEELCDDIREGVLSSRITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIP-E 290
              WE L  D+ +G       +P     M +    +P     + K    L     L P E
Sbjct: 190 PSQWETLLTDLEQGTCKYAEALPP---EMRRACFSHP-----LPKHARDLRRTNPLCPRE 241

Query: 291 LFPNAKYLSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFA 350
           ++P    +S    G+ E   K+L      L L      +SE ++        P  + +  
Sbjct: 242 IWPKLCVISCWANGASELAAKELGKRFPGLLLQPKGLIASEAFVTLPFGSYQPLAIHSH- 300

Query: 351 VLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVAVAGSLF 405
                 +FEFI     + + ++L ++        +K GE YE++VT    AG L+
Sbjct: 301 ------FFEFI-----DADGRILLVD-------TLKEGETYEVVVTT---AGGLW 334


>gi|319953129|ref|YP_004164396.1| gh3 auxin-responsive promoter [Cellulophaga algicola DSM 14237]
 gi|319421789|gb|ADV48898.1| GH3 auxin-responsive promoter [Cellulophaga algicola DSM 14237]
          Length = 498

 Score = 39.7 bits (91), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 22/99 (22%), Positives = 53/99 (53%), Gaps = 2/99 (2%)

Query: 28  QRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPIL 87
           Q + L  ++E   +  + ++   +   +   F   VP+  +E+L+PY+++++ G+   + 
Sbjct: 30  QEKLLAGLIETAKNTTFGKDHDFSEIKNHADFIKKVPVRDYEELKPYVEKVVAGESDILW 89

Query: 88  TGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTS 126
             KPI   +++SGTT G  K++P  +  ++  ++  R +
Sbjct: 90  PNKPI-YFAKTSGTTSG-AKYIPITETSIKHQVEASRNA 126


>gi|387907275|ref|YP_006337611.1| auxin-regulated protein [Blattabacterium sp. (Blaberus giganteus)]
 gi|387582168|gb|AFJ90946.1| putative auxin-regulated protein [Blattabacterium sp. (Blaberus
           giganteus)]
          Length = 506

 Score = 39.7 bits (91), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 23/97 (23%), Positives = 47/97 (48%), Gaps = 1/97 (1%)

Query: 14  IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQP 73
           I+  E   +    IQ + + +++    + E+ +  G       + F   +P+  + DLQ 
Sbjct: 18  IKNIEFFMRYPIEIQNQLINQLILYAKNTEFGKKYGFCDIKKYKQFSERIPICKYTDLQN 77

Query: 74  YIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLP 110
            I RI  G+ + +  G+ +   ++SSGTT  + K++P
Sbjct: 78  VINRIRKGEKNVLWPGE-VKWFAKSSGTTNERSKYIP 113


>gi|392592239|gb|EIW81566.1| hypothetical protein CONPUDRAFT_165674 [Coniophora puteana
           RWD-64-598 SS2]
          Length = 444

 Score = 39.3 bits (90), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 55/253 (21%), Positives = 92/253 (36%), Gaps = 44/253 (17%)

Query: 193 PDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRIT 252
           P+    +  H +  L  R  +  + + +  + +   R  +  WE L   I +G L     
Sbjct: 63  PNHRSMMLTHAVFALAERS-LDTLCTLWTTTFIDFIRLIDEEWEMLVGAIGDGHLPQLPE 121

Query: 253 VPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKK 312
           +  + +++S     NP+ A  +           G   + +P  + L  I TG+    L K
Sbjct: 122 MDDVYSSISPTFSANPDRAKELRNLGPPSQTAEGWATKAWPRFELLIAITTGTFGRVLPK 181

Query: 313 ---------------------LRHYAG-DLPLMSADYGSSEGWIGANVNPSLPPELATFA 350
                                +R Y G D+P+ +  Y S+EG IG   N  L P +    
Sbjct: 182 ARAFIPFISRAQCLKHQKPSQVRAYIGPDVPVRNVVYASAEGGIGIVYNDRL-PNVVQVV 240

Query: 351 VLPNIGYFEFIP-QRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVT--------NVAVA 401
               I + E  P    G L+            + EV VG+ YE ++T         +A A
Sbjct: 241 TDDYIEFLEITPADEDGELKR-----------MWEVDVGKIYEPVITMRNGLWRYRMADA 289

Query: 402 GSLFSRIPICGLP 414
             +    PI G+P
Sbjct: 290 VQVVGFSPIDGVP 302


>gi|392591842|gb|EIW81169.1| hypothetical protein CONPUDRAFT_104388 [Coniophora puteana
           RWD-64-598 SS2]
          Length = 607

 Score = 39.3 bits (90), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 75/367 (20%), Positives = 138/367 (37%), Gaps = 47/367 (12%)

Query: 57  ESFKSCVPLVTHEDLQPYIQRIID-----GDISPILT-GKPITTISRSSGTTQGKPKFLP 110
           E F S V L  ++  QP++ R  +      D+  ++  G P   I+ SSGT+ G  K  P
Sbjct: 81  EVFNSNVELSEYKHYQPFVSRFFEKPCKAADVENLMAPGMPFF-IAHSSGTSGGATKHFP 139

Query: 111 FNDELMETTLQIFRTSYAFRNREFPIGKGKALQFIYGSKQSKT---KGGLNAGTATTNVY 167
                   +    +T  A  N     G    + +  G ++      +           + 
Sbjct: 140 KYQHPKHMSTSTAQT-MAASNPVSKTGGKNCVVYSLGYREVVAPVDEKDEPVAHMPVCLM 198

Query: 168 RSSTFKAEMKAMQSQ-----------CCSPDEVIFGPDFHQSLYCHLLCGLIFR--EEIQ 214
            S T +  +   Q +             SP    F PD+   L+ H L  L  R  E I 
Sbjct: 199 SSGTIRMHIGMHQPKDQFYQKIKVPINTSPLAGSFIPDYKSFLFMHGLFALAERQTELIN 258

Query: 215 LVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPSIRAAMSKILKPNPELADLI 274
            +FST    L    R     ++ + D I +G +        +   + +  K +PE A  +
Sbjct: 259 TMFSTIFRDLC---RVLIEQYDVMVDCIEKGTIPDLPGTDHVHDNLMQFWKADPERAAEL 315

Query: 275 HKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRHYAG-DLPLMSADYGSSEGW 333
            +K +  +   G +  L+P    +  I +GS    L ++ HY G ++ L +     SE +
Sbjct: 316 -RKITNNTEEEGWLRRLWPGLSIVVAISSGSFGSVLPEITHYMGPEVNLRTLGINCSEAF 374

Query: 334 IGANVNPSLPPELATFAVLPNIGYFEFI----PQRLGNLESQVLCIEPKPVGLTEVKVGE 389
           +    +     + + + V+ +    E++    P+    L               E K+G+
Sbjct: 375 LALAYDAK---DKSLYKVVGSDDIIEYLDIDAPENASGLSPA-----------WEAKIGK 420

Query: 390 EYEIIVT 396
           +YE+++T
Sbjct: 421 KYEVVLT 427


>gi|301773545|ref|XP_002922214.1| PREDICTED: LOW QUALITY PROTEIN: GH3 domain-containing protein-like
           [Ailuropoda melanoleuca]
          Length = 530

 Score = 38.5 bits (88), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 8/113 (7%)

Query: 286 GLIPELFPNAKYLSGIMTGSMEHYLKKLRH-YAGDLPLMSADYGSSEGWIGANVNPSLPP 344
           GL   L+P  + +  +  G     +  L   +   L   S  Y +S G +G N+ P  P 
Sbjct: 250 GLALRLWPKLQVVVTLDAGGQAEAVAALGALWCQGLAFFSPAYAASGGVVGLNLGPEQPR 309

Query: 345 ELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN 397
            L  + + P   + E +P + G  E          V L E + GEEYE+++T+
Sbjct: 310 GL--YLLPPGAPFIELLPVKEGAQEGAA-----STVLLAEAQKGEEYELVLTD 355


>gi|408793482|ref|ZP_11205088.1| GH3 auxin-responsive promoter [Leptospira meyeri serovar Hardjo
           str. Went 5]
 gi|408461986|gb|EKJ85715.1| GH3 auxin-responsive promoter [Leptospira meyeri serovar Hardjo
           str. Went 5]
          Length = 516

 Score = 38.5 bits (88), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 21/91 (23%), Positives = 46/91 (50%), Gaps = 2/91 (2%)

Query: 25  ERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDIS 84
           E +Q + LR IL+     ++ +   +      + F+  +P+  +   +  + RI+ G+  
Sbjct: 5   EDVQLDNLRNILKNAEGTKFGEKFTIKRNWSIQEFQKQIPISEYNTYEDNLDRILKGE-K 63

Query: 85  PILTGKPITTISRSSGTTQGKPKFLPFNDEL 115
            +LT   +  +  +SG++ G+ K++PF D L
Sbjct: 64  NVLTKSKLRRVGLTSGSS-GRVKYIPFTDLL 93


>gi|86144107|ref|ZP_01062444.1| putative plant auxin-regulated protein [Leeuwenhoekiella blandensis
           MED217]
 gi|85829369|gb|EAQ47834.1| putative plant auxin-regulated protein [Leeuwenhoekiella blandensis
           MED217]
          Length = 497

 Score = 38.5 bits (88), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 10/107 (9%)

Query: 59  FKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMET 118
           F   VP+  +E L+ Y++  + G    +  GKP    +++SGTT G  K++P   E M  
Sbjct: 61  FAKAVPVRDYEALKNYVEEAVAGKEDILWPGKP-EYFAKTSGTTSG-AKYIPITKESMPM 118

Query: 119 TLQIFRTSYAFR-----NREFPIGKGKALQFIYGSKQSKTKGGLNAG 160
            +   R +         N  F  GK   + F+ GS + + K G+  G
Sbjct: 119 HVNAARDAILHYIAESGNSSFVDGK---MIFLQGSPKLQIKSGIKTG 162


>gi|395532388|ref|XP_003768252.1| PREDICTED: GH3 domain-containing protein [Sarcophilus harrisii]
          Length = 596

 Score = 38.1 bits (87), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 46/209 (22%), Positives = 81/209 (38%), Gaps = 28/209 (13%)

Query: 203 LLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPSIRAAMSK 262
           LL   +   ++Q++ +  A  L+  F      WE L + +  G        P   A +  
Sbjct: 244 LLLAALGTRDLQVLEAGTATELLDVFCCLGADWEGLVEAVAAGQPGFSPLAPDRAAELKT 303

Query: 263 ILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKL-RHYAGDLP 321
            L+  P+                GL   L+P  + +     G  +     L   +   LP
Sbjct: 304 ELEQGPQ----------------GLARRLWPQLQVVVTTDAGGQDVAKAALGATWCQGLP 347

Query: 322 LMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVG 381
             S  Y ++ G IG N++P    +   + +LP   + E +P    + E       P  + 
Sbjct: 348 FFSPAYVAAGGMIGLNLSPKQ--QKPGYLLLPGPPFVELLPAWERSQEE-----APCTLL 400

Query: 382 LTEVKVGEEYEIIVTNVAVAGSLFSRIPI 410
           L E   G+EYE+++T+    GS  +R P+
Sbjct: 401 LGEALQGKEYELVLTD----GSHLTRCPL 425


>gi|410865575|ref|YP_006980186.1| Transcription-repair coupling factor [Propionibacterium
           acidipropionici ATCC 4875]
 gi|410822216|gb|AFV88831.1| Transcription-repair coupling factor [Propionibacterium
           acidipropionici ATCC 4875]
          Length = 1200

 Score = 38.1 bits (87), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 6/84 (7%)

Query: 225 VHAFRTFELVWEELCDDIREGVLSS----RITVPSIRAAMSKILKPNPELADLIHKKCSG 280
           V   RTF +  +   DD  + V+++     I  P  RA    +L  +PELAD++ K   G
Sbjct: 211 VEEIRTFTVADQRSTDDTHDDVVAAPCRELILTPEARARARALLPDHPELADMLEKIGQG 270

Query: 281 --LSNWYGLIPELFPNAKYLSGIM 302
             +     LIP L    + LS ++
Sbjct: 271 QAVEGMEALIPALVDRIELLSDVL 294


>gi|416019448|ref|ZP_11566341.1| hypothetical protein PsgB076_25859, partial [Pseudomonas syringae
          pv. glycinea str. B076]
 gi|422403229|ref|ZP_16480288.1| hypothetical protein Pgy4_04052, partial [Pseudomonas syringae
          pv. glycinea str. race 4]
 gi|320322276|gb|EFW78372.1| hypothetical protein PsgB076_25859 [Pseudomonas syringae pv.
          glycinea str. B076]
 gi|330873216|gb|EGH07365.1| hypothetical protein Pgy4_04052 [Pseudomonas syringae pv.
          glycinea str. race 4]
          Length = 86

 Score = 37.7 bits (86), Expect = 9.4,   Method: Composition-based stats.
 Identities = 19/61 (31%), Positives = 37/61 (60%), Gaps = 1/61 (1%)

Query: 15 EEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGR-TDPESFKSCVPLVTHEDLQP 73
          +++ T  K  ++ Q E L+ I+  + +A + +  G N   TD ESF++ +P++ +ED +P
Sbjct: 26 DQYMTSLKHPKQAQLEVLQDIIGISRNALHWREHGYNDSVTDEESFRNILPIMRYEDFEP 85

Query: 74 Y 74
          Y
Sbjct: 86 Y 86


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.319    0.137    0.405 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,584,797,947
Number of Sequences: 23463169
Number of extensions: 288122082
Number of successful extensions: 725951
Number of sequences better than 100.0: 897
Number of HSP's better than 100.0 without gapping: 476
Number of HSP's successfully gapped in prelim test: 421
Number of HSP's that attempted gapping in prelim test: 723760
Number of HSP's gapped (non-prelim): 997
length of query: 414
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 269
effective length of database: 8,957,035,862
effective search space: 2409442646878
effective search space used: 2409442646878
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 78 (34.7 bits)