Query 015052
Match_columns 414
No_of_seqs 122 out of 547
Neff 6.8
Searched_HMMs 13730
Date Mon Mar 25 05:49:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015052.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/015052hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1lcia_ e.23.1.1 (A:) Lucifera 75.6 0.6 4.4E-05 44.5 2.6 28 88-116 185-212 (541)
2 d1mdba_ e.23.1.1 (A:) Dihydrox 72.4 1.1 7.8E-05 42.5 3.6 27 91-118 183-209 (536)
3 d1amua_ e.23.1.1 (A:) Phenylal 70.1 0.72 5.2E-05 43.7 1.7 27 90-117 166-192 (514)
4 d1pg4a_ e.23.1.1 (A:) Acetyl-C 68.9 1.4 0.00011 43.8 3.8 27 89-116 251-277 (643)
5 d1ry2a_ e.23.1.1 (A:) Acetyl-C 61.8 1.2 9E-05 43.9 1.6 25 91-116 240-264 (640)
6 d1v25a_ e.23.1.1 (A:) Long cha 60.5 1.3 9.3E-05 42.2 1.4 29 87-116 166-194 (534)
7 d3cw9a1 e.23.1.1 (A:1-503) 4-c 55.7 3 0.00022 38.4 3.0 30 88-118 151-180 (503)
8 d2ogqa1 d.223.1.2 (A:371-494) 30.1 15 0.0011 28.6 2.9 37 323-364 51-87 (124)
9 d1lcia_ e.23.1.1 (A:) Lucifera 23.4 1.3E+02 0.0094 27.0 9.1 43 290-336 301-346 (541)
10 d1fnfa1 b.1.2.1 (A:1142-1235) 23.2 24 0.0018 24.8 2.8 25 376-400 56-80 (94)
11 d1qr4a1 b.1.2.1 (A:1-87) Tenas 22.7 25 0.0018 24.1 2.7 26 376-401 49-74 (87)
12 d1tena_ b.1.2.1 (A:) Tenascin 21.9 26 0.0019 24.1 2.7 27 375-401 52-78 (90)
13 d2cuia1 b.1.2.1 (A:6-106) Tena 21.6 28 0.002 24.3 2.9 24 377-400 64-87 (101)
14 d1fnaa_ b.1.2.1 (A:) Fibronect 20.2 32 0.0023 23.7 2.9 25 376-400 48-72 (91)
No 1
>d1lcia_ e.23.1.1 (A:) Luciferase {Firefly (Photinus pyralis) [TaxId: 7054]}
Probab=75.55 E-value=0.6 Score=44.50 Aligned_cols=28 Identities=36% Similarity=0.436 Sum_probs=18.9
Q ss_pred cCcccceEecccCCCCCCcccCcCChHHH
Q 015052 88 TGKPITTISRSSGTTQGKPKFLPFNDELM 116 (414)
Q Consensus 88 ~~~pi~~f~~TSGTT~g~~K~IP~T~~~l 116 (414)
.++.+.++..||||| |.+|-+..|.+.+
T Consensus 185 ~~~~~a~i~~TSGTT-G~PKgV~~s~~~l 212 (541)
T d1lcia_ 185 RDKTIALIMNSSGST-GLPKGVALPHRTA 212 (541)
T ss_dssp TTTSEEEEEEC------CCCEEEEEHHHH
T ss_pred CCCceEEEEeecccc-ccccccccccchh
Confidence 445667889999999 8999999999875
No 2
>d1mdba_ e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtilis [TaxId: 1423]}
Probab=72.45 E-value=1.1 Score=42.49 Aligned_cols=27 Identities=22% Similarity=0.333 Sum_probs=22.6
Q ss_pred ccceEecccCCCCCCcccCcCChHHHHH
Q 015052 91 PITTISRSSGTTQGKPKFLPFNDELMET 118 (414)
Q Consensus 91 pi~~f~~TSGTT~g~~K~IP~T~~~l~~ 118 (414)
-+.+...||||| |++|-++.|.+.+..
T Consensus 183 d~a~i~~TSGTT-G~PKgV~~s~~~~~~ 209 (536)
T d1mdba_ 183 DVAFLQLSGGST-GLSKLIPRTHDDYIY 209 (536)
T ss_dssp SEEEEEECCCSS-SSCCEEEEEHHHHHH
T ss_pred chHHhhhccccc-ccceecccccccccc
Confidence 356889999999 899999999887643
No 3
>d1amua_ e.23.1.1 (A:) Phenylalanine activating domain of gramicidin synthetase 1 {Bacillus brevis [TaxId: 1393]}
Probab=70.12 E-value=0.72 Score=43.74 Aligned_cols=27 Identities=26% Similarity=0.345 Sum_probs=17.8
Q ss_pred cccceEecccCCCCCCcccCcCChHHHH
Q 015052 90 KPITTISRSSGTTQGKPKFLPFNDELME 117 (414)
Q Consensus 90 ~pi~~f~~TSGTT~g~~K~IP~T~~~l~ 117 (414)
+.+.+...||||| |++|.++.|...+.
T Consensus 166 ~d~a~i~~TSGTT-G~PK~v~~s~~~~~ 192 (514)
T d1amua_ 166 TDLAYVIYTSGTT-GNPKGTMLEHKGIS 192 (514)
T ss_dssp TSEEEEEEEC------CEEEEEESHHHH
T ss_pred ccceEEEEccCCC-CCcccccccccccc
Confidence 3356889999999 89999999998753
No 4
>d1pg4a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella enterica [TaxId: 28901]}
Probab=68.95 E-value=1.4 Score=43.80 Aligned_cols=27 Identities=30% Similarity=0.239 Sum_probs=21.7
Q ss_pred CcccceEecccCCCCCCcccCcCChHHH
Q 015052 89 GKPITTISRSSGTTQGKPKFLPFNDELM 116 (414)
Q Consensus 89 ~~pi~~f~~TSGTT~g~~K~IP~T~~~l 116 (414)
++-+.+...||||| |++|-|..|...+
T Consensus 251 ~dd~a~IlyTSGTT-G~PKgV~~sh~~~ 277 (643)
T d1pg4a_ 251 AEDPLFILYTSGST-GKPKGVLHTTGGY 277 (643)
T ss_dssp TTSEEEEEEECCSS-SSCEEEEEESHHH
T ss_pred CCCeEEEEeCCCcc-cCCCEEEEccHHH
Confidence 34445788999999 9999999998753
No 5
>d1ry2a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=61.80 E-value=1.2 Score=43.87 Aligned_cols=25 Identities=24% Similarity=0.215 Sum_probs=21.0
Q ss_pred ccceEecccCCCCCCcccCcCChHHH
Q 015052 91 PITTISRSSGTTQGKPKFLPFNDELM 116 (414)
Q Consensus 91 pi~~f~~TSGTT~g~~K~IP~T~~~l 116 (414)
.+.+...||||| |++|-+..|...+
T Consensus 240 d~a~i~~TSGTT-G~PKgV~~~h~~~ 264 (640)
T d1ry2a_ 240 DPLFLLYTSGST-GAPKGVQHSTAGY 264 (640)
T ss_dssp SCCEEEEECCSS-SSCEEEEECSHHH
T ss_pred cCCEEEECCCCC-CCCcceeeccccH
Confidence 346889999999 9999999888764
No 6
>d1v25a_ e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0168 {Thermus thermophilus [TaxId: 274]}
Probab=60.51 E-value=1.3 Score=42.24 Aligned_cols=29 Identities=21% Similarity=0.422 Sum_probs=24.0
Q ss_pred ccCcccceEecccCCCCCCcccCcCChHHH
Q 015052 87 LTGKPITTISRSSGTTQGKPKFLPFNDELM 116 (414)
Q Consensus 87 l~~~pi~~f~~TSGTT~g~~K~IP~T~~~l 116 (414)
.+++.+.+...||||| |.+|-++.|...+
T Consensus 166 ~~~~~~a~i~~TSGTT-G~PKgv~~s~~~l 194 (534)
T d1v25a_ 166 VPERAACGMAYTTGTT-GLPKGVVYSHRAL 194 (534)
T ss_dssp CCTTSEEEEEEECSSS-SSCEEEEEEHHHH
T ss_pred cccCCcEEEEEecCCC-CCccccccccchh
Confidence 3445567899999999 8999999998875
No 7
>d3cw9a1 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId: 512]}
Probab=55.65 E-value=3 Score=38.44 Aligned_cols=30 Identities=30% Similarity=0.246 Sum_probs=24.1
Q ss_pred cCcccceEecccCCCCCCcccCcCChHHHHH
Q 015052 88 TGKPITTISRSSGTTQGKPKFLPFNDELMET 118 (414)
Q Consensus 88 ~~~pi~~f~~TSGTT~g~~K~IP~T~~~l~~ 118 (414)
.++.+.+...||||| |.+|.+..|...+..
T Consensus 151 ~~~~~a~i~~TSGTT-G~pK~v~~s~~~~~~ 180 (503)
T d3cw9a1 151 EPAQPAFIFYTSGTT-GLPKAAIIPQRAAES 180 (503)
T ss_dssp CTTSEEEEEEECCSS-SSCEEEEEEGGGHHH
T ss_pred hhhhhhhhccccccc-ccccccccccchhhh
Confidence 344456888999999 899999999987643
No 8
>d2ogqa1 d.223.1.2 (A:371-494) Serine/threonine-protein kinase plk C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.15 E-value=15 Score=28.60 Aligned_cols=37 Identities=14% Similarity=0.235 Sum_probs=31.5
Q ss_pred ccccccccceeeeecCCCCCCcccceeeecCCceEEEeeecC
Q 015052 323 MSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQR 364 (414)
Q Consensus 323 ~~~~Y~ASEg~igi~~~~~~~~~~~~~~l~p~~~ffEFIp~~ 364 (414)
++.+|-=|.|.+||.+.+.. .+++.|+..+++|++-+
T Consensus 51 yGlgY~LSdgtvGV~FND~T-----~~il~~~~~~v~Y~~~~ 87 (124)
T d2ogqa1 51 YGLGYQLCDNSVGVLFNDST-----RLILYNDGDSLQYIERD 87 (124)
T ss_dssp TEEEEEETTSCEEEEETTSC-----EEEECTTSSEEEEECTT
T ss_pred ceEEEEEcCCcEEEEEeCCc-----eEEECCCCCEEEEEcCC
Confidence 45789999999999998765 58899999999999765
No 9
>d1lcia_ e.23.1.1 (A:) Luciferase {Firefly (Photinus pyralis) [TaxId: 7054]}
Probab=23.38 E-value=1.3e+02 Score=26.99 Aligned_cols=43 Identities=14% Similarity=0.045 Sum_probs=26.1
Q ss_pred ccCCCCceeEEEecCC---hHHHHHHHHhHhCCCCcccccccccceeeee
Q 015052 290 ELFPNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWIGA 336 (414)
Q Consensus 290 ~lWP~L~~i~~~~~G~---~~~Y~~~l~~~~~~vpi~~~~Y~ASEg~igi 336 (414)
.-+++|+ .+.+|+ ...-..++.+.++...++ .+|++||+...+
T Consensus 301 ~~~~~l~---~v~~gG~~~~~~~~~~~~~~~~~~~~~-~~YG~TE~~~~~ 346 (541)
T d1lcia_ 301 YDLSNLH---EIASGGAPLSKEVGEAVAKRFHLPGIR-QGYGLTETTSAI 346 (541)
T ss_dssp SCCTTCC---EEECTTCCCCHHHHHHHHHHTTCSCCB-CEECCGGGSSCS
T ss_pred cccccce---EEEecccccccccccccccccCCceee-ecCCccccCceE
Confidence 3457777 455555 333444555566664454 899999985333
No 10
>d1fnfa1 b.1.2.1 (A:1142-1235) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.18 E-value=24 Score=24.79 Aligned_cols=25 Identities=20% Similarity=0.327 Sum_probs=21.0
Q ss_pred CCceeccCCcccCCeEEEEEecCcc
Q 015052 376 EPKPVGLTEVKVGEEYEIIVTNVAV 400 (414)
Q Consensus 376 ~~~tl~l~ele~G~~YelViTt~~G 400 (414)
+...+.+.+|+.|..|++-|+..+|
T Consensus 56 ~~~~~~i~~L~p~t~Y~v~V~a~~~ 80 (94)
T d1fnfa1 56 DQSSCTFDNLSPGLEYNVSVYTVKD 80 (94)
T ss_dssp TCCEEECCCCCTTSCEEEEEEEEET
T ss_pred CccEEEECCCCCCCEEEEEEEEEcC
Confidence 3466899999999999999987654
No 11
>d1qr4a1 b.1.2.1 (A:1-87) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=22.66 E-value=25 Score=24.08 Aligned_cols=26 Identities=19% Similarity=0.257 Sum_probs=22.3
Q ss_pred CCceeccCCcccCCeEEEEEecCcch
Q 015052 376 EPKPVGLTEVKVGEEYEIIVTNVAVA 401 (414)
Q Consensus 376 ~~~tl~l~ele~G~~YelViTt~~GL 401 (414)
+...+.+..|++|..|.+-|+..+|.
T Consensus 49 ~~~~~~~~~L~p~t~Y~v~V~a~~~~ 74 (87)
T d1qr4a1 49 DSTSFILRGLDAGTEYTISLVAEKGR 74 (87)
T ss_dssp TCSEEEEESCCSSCEEEEEEEEESSS
T ss_pred CcCEEEECCCCcCCEEEEEEEEEcCC
Confidence 34678999999999999999987774
No 12
>d1tena_ b.1.2.1 (A:) Tenascin {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.92 E-value=26 Score=24.08 Aligned_cols=27 Identities=15% Similarity=0.217 Sum_probs=22.3
Q ss_pred CCCceeccCCcccCCeEEEEEecCcch
Q 015052 375 IEPKPVGLTEVKVGEEYEIIVTNVAVA 401 (414)
Q Consensus 375 ~~~~tl~l~ele~G~~YelViTt~~GL 401 (414)
.+...+.+.+|++|.+|.+-|+..+|-
T Consensus 52 ~~~~~~~i~~L~p~t~Y~~~V~a~~~~ 78 (90)
T d1tena_ 52 EDENQYSIGNLKPDTEYEVSLISRRGD 78 (90)
T ss_dssp TTCCEEEECSCCTTCEEEEEEEEEETT
T ss_pred CCcceeeEeeecCCCEEEEEEEEEeCC
Confidence 345678999999999999999887664
No 13
>d2cuia1 b.1.2.1 (A:6-106) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.60 E-value=28 Score=24.32 Aligned_cols=24 Identities=13% Similarity=0.266 Sum_probs=19.8
Q ss_pred CceeccCCcccCCeEEEEEecCcc
Q 015052 377 PKPVGLTEVKVGEEYEIIVTNVAV 400 (414)
Q Consensus 377 ~~tl~l~ele~G~~YelViTt~~G 400 (414)
...+.+.+|+.|..|++-|+..+|
T Consensus 64 ~~~~~v~~L~p~t~Y~~~V~a~~~ 87 (101)
T d2cuia1 64 RHSAVLRDLRSGTLYSLTLYGLRG 87 (101)
T ss_dssp CCEEEECSCCTTCEEEEEEEEECS
T ss_pred eeEEEeCCCCcCCEEEEEEEEEeC
Confidence 345678999999999999987655
No 14
>d1fnaa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.22 E-value=32 Score=23.68 Aligned_cols=25 Identities=24% Similarity=0.347 Sum_probs=20.9
Q ss_pred CCceeccCCcccCCeEEEEEecCcc
Q 015052 376 EPKPVGLTEVKVGEEYEIIVTNVAV 400 (414)
Q Consensus 376 ~~~tl~l~ele~G~~YelViTt~~G 400 (414)
+...+.+.+|++|..|++-|+..++
T Consensus 48 ~~t~~~l~~L~p~t~Y~~~V~a~~~ 72 (91)
T d1fnaa_ 48 SKSTATISGLKPGVDYTITVYAVTG 72 (91)
T ss_dssp TCCEEEECSCCTTCEEEEEEEEECT
T ss_pred CccEEEeCCCCCCCEEEEEEEEEeC
Confidence 3567899999999999999987544
Done!