Your job contains 1 sequence.
>015057
MAELEAEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRF
VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS
HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVE
GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH
TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT
AGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYG
ELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERLDQVIL
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 015057
(414 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2035423 - symbol:AT1G19880 species:3702 "Arabi... 1787 3.2e-184 1
UNIPROTKB|Q9P258 - symbol:RCC2 "Protein RCC2" species:960... 714 1.6e-70 1
MGI|MGI:1919784 - symbol:Rcc2 "regulator of chromosome co... 712 2.6e-70 1
ZFIN|ZDB-GENE-040426-2213 - symbol:rcc2 "regulator of chr... 663 4.1e-65 1
FB|FBgn0031769 - symbol:CG9135 species:7227 "Drosophila m... 639 1.4e-62 1
TAIR|locus:2163986 - symbol:UVR8 "UVB-RESISTANCE 8" speci... 371 3.6e-34 1
ZFIN|ZDB-GENE-070718-6 - symbol:herc2 "hect domain and RL... 325 1.8e-31 3
UNIPROTKB|E1BW48 - symbol:HERC2 "Uncharacterized protein"... 339 5.5e-30 2
UNIPROTKB|E1C8K2 - symbol:HERC2 "Uncharacterized protein"... 339 5.5e-30 2
RGD|1307989 - symbol:Herc2 "HECT and RLD domain containin... 324 8.3e-30 2
UNIPROTKB|F1M560 - symbol:Herc2 "Protein Herc2" species:1... 324 8.5e-30 2
UNIPROTKB|D4ACN3 - symbol:Herc2 "Protein Herc2" species:1... 324 1.5e-29 2
MGI|MGI:103234 - symbol:Herc2 "hect (homologous to the E6... 324 1.6e-29 2
UNIPROTKB|O95714 - symbol:HERC2 "E3 ubiquitin-protein lig... 323 2.3e-29 2
UNIPROTKB|E2RDC2 - symbol:HERC2 "Uncharacterized protein"... 320 2.4e-29 2
FB|FBgn0031107 - symbol:HERC2 "HECT and RLD domain contai... 332 2.4e-29 2
UNIPROTKB|G3MX12 - symbol:HERC2 "Uncharacterized protein"... 320 3.7e-29 2
UNIPROTKB|E1B782 - symbol:HERC2 "Uncharacterized protein"... 320 3.8e-29 2
UNIPROTKB|O95199 - symbol:RCBTB2 "RCC1 and BTB domain-con... 326 6.9e-29 1
MGI|MGI:1917200 - symbol:Rcbtb2 "regulator of chromosome ... 324 1.1e-28 1
UNIPROTKB|E1BVG2 - symbol:RCBTB1 "Uncharacterized protein... 302 2.7e-26 1
UNIPROTKB|F1MNS0 - symbol:HERC1 "Uncharacterized protein"... 265 7.5e-26 2
UNIPROTKB|F1S098 - symbol:HERC1 "Uncharacterized protein"... 265 7.5e-26 2
UNIPROTKB|Q15751 - symbol:HERC1 "Probable E3 ubiquitin-pr... 267 8.1e-26 2
UNIPROTKB|E1C4H7 - symbol:HERC1 "Uncharacterized protein"... 280 2.4e-25 2
TAIR|locus:2079147 - symbol:AT3G47660 "AT3G47660" species... 292 1.4e-24 1
TAIR|locus:2159295 - symbol:RUG3 "RCC1/UVR8/GEF-like 3" s... 287 1.4e-24 1
UNIPROTKB|E2QYQ5 - symbol:HERC1 "Uncharacterized protein"... 266 1.7e-24 2
TAIR|locus:2146142 - symbol:AT5G16040 "AT5G16040" species... 281 6.7e-24 1
UNIPROTKB|E1BAV2 - symbol:HERC4 "Uncharacterized protein"... 287 1.7e-23 1
ZFIN|ZDB-GENE-030131-7951 - symbol:rcbtb1 "regulator of c... 284 2.1e-23 1
MGI|MGI:1918580 - symbol:Rcbtb1 "regulator of chromosome ... 283 3.0e-23 1
UNIPROTKB|I3LCV3 - symbol:RCBTB1 "Uncharacterized protein... 283 3.6e-23 1
RGD|1308467 - symbol:Rcbtb1 "regulator of chromosome cond... 282 4.3e-23 1
UNIPROTKB|F1PV11 - symbol:RCBTB1 "Uncharacterized protein... 282 4.3e-23 1
UNIPROTKB|E1BKF7 - symbol:RCBTB1 "Uncharacterized protein... 282 4.3e-23 1
UNIPROTKB|Q8NDN9 - symbol:RCBTB1 "RCC1 and BTB domain-con... 282 4.3e-23 1
TAIR|locus:505006603 - symbol:AT5G12350 "AT5G12350" speci... 283 1.4e-22 1
FB|FBgn0035207 - symbol:CG9153 species:7227 "Drosophila m... 281 3.0e-22 1
UNIPROTKB|E2RFW5 - symbol:HERC4 "Uncharacterized protein"... 280 4.1e-22 1
UNIPROTKB|E2RFV1 - symbol:HERC4 "Uncharacterized protein"... 280 4.2e-22 1
UNIPROTKB|F1N1N9 - symbol:HERC5 "Uncharacterized protein"... 278 7.2e-22 1
TAIR|locus:2076889 - symbol:AT3G02510 "AT3G02510" species... 267 1.1e-21 1
TAIR|locus:2076532 - symbol:AT3G02300 "AT3G02300" species... 271 1.1e-21 1
RGD|1563497 - symbol:Sergef "secretion regulating guanine... 254 1.3e-21 1
ZFIN|ZDB-GENE-090313-139 - symbol:herc3 "hect domain and ... 273 3.9e-21 1
MGI|MGI:1914595 - symbol:Herc4 "hect domain and RLD 4" sp... 273 3.9e-21 1
UNIPROTKB|F1S9B1 - symbol:SERGEF "Uncharacterized protein... 248 6.5e-21 1
RGD|1310971 - symbol:Herc4 "HECT and RLD domain containin... 271 7.3e-21 1
UNIPROTKB|Q3MHW0 - symbol:SERGEF "Secretion-regulating gu... 259 9.2e-21 2
UNIPROTKB|Q9UII4 - symbol:HERC5 "E3 ISG15--protein ligase... 270 9.6e-21 1
UNIPROTKB|F1NCH3 - symbol:HERC4 "Uncharacterized protein"... 270 1.0e-20 1
UNIPROTKB|Q5GLZ8 - symbol:HERC4 "Probable E3 ubiquitin-pr... 270 1.0e-20 1
ZFIN|ZDB-GENE-090311-7 - symbol:si:ch211-281g13.5 "si:ch2... 269 1.2e-20 1
ZFIN|ZDB-GENE-090311-56 - symbol:si:ch73-190m4.1 "si:ch73... 269 1.2e-20 1
ZFIN|ZDB-GENE-070615-14 - symbol:zgc:163136 "zgc:163136" ... 269 1.2e-20 1
ZFIN|ZDB-GENE-090311-16 - symbol:si:ch211-281g13.4 "si:ch... 268 1.6e-20 1
TAIR|locus:504956339 - symbol:RUG1 "AT5G08710" species:37... 260 2.0e-20 1
ZFIN|ZDB-GENE-061220-11 - symbol:sergef "secretion regula... 258 3.2e-20 1
TAIR|locus:2092190 - symbol:AT3G26100 species:3702 "Arabi... 260 4.4e-20 2
TAIR|locus:2086253 - symbol:AT3G23270 "AT3G23270" species... 264 5.6e-20 1
TAIR|locus:2099986 - symbol:AT3G55580 species:3702 "Arabi... 220 6.2e-20 2
UNIPROTKB|F1NUG6 - symbol:Gga.50841 "Uncharacterized prot... 260 9.1e-20 1
MGI|MGI:1351630 - symbol:Sergef "secretion regulating gua... 255 1.2e-19 1
UNIPROTKB|J9NWD8 - symbol:HERC1 "Uncharacterized protein"... 266 1.7e-19 1
UNIPROTKB|Q9UGK8 - symbol:SERGEF "Secretion-regulating gu... 253 2.0e-19 1
UNIPROTKB|G3V1B4 - symbol:SERGEF "Secretion-regulating gu... 246 2.2e-19 1
RGD|1307803 - symbol:Herc3 "HECT and RLD domain containin... 258 2.4e-19 1
UNIPROTKB|F1PB99 - symbol:HERC5 "Uncharacterized protein"... 257 3.8e-19 1
UNIPROTKB|A2VDP7 - symbol:HERC3 "HERC3 protein" species:9... 257 4.0e-19 1
UNIPROTKB|Q15034 - symbol:HERC3 "Probable E3 ubiquitin-pr... 257 4.0e-19 1
UNIPROTKB|F1RW66 - symbol:HERC3 "Uncharacterized protein"... 255 7.0e-19 1
DICTYBASE|DDB_G0282575 - symbol:DDB_G0282575 "putative GT... 144 7.9e-19 3
UNIPROTKB|E2RMB0 - symbol:HERC3 "Uncharacterized protein"... 254 9.1e-19 1
TAIR|locus:2165770 - symbol:AT5G42140 "AT5G42140" species... 254 9.4e-19 1
UNIPROTKB|E2R5W9 - symbol:RCCD1 "Uncharacterized protein"... 149 1.6e-18 2
RGD|1306366 - symbol:Herc1 "HECT and RLD domain containin... 249 4.3e-18 1
TAIR|locus:2090136 - symbol:AT3G15430 "AT3G15430" species... 241 6.8e-18 1
RGD|1306897 - symbol:Nek8 "NIMA-related kinase 8" species... 244 7.0e-18 1
WB|WBGene00017195 - symbol:glo-4 species:6239 "Caenorhabd... 176 7.6e-18 2
MGI|MGI:1890646 - symbol:Nek8 "NIMA (never in mitosis gen... 243 9.1e-18 1
WB|WBGene00021685 - symbol:herc-1 species:6239 "Caenorhab... 194 1.0e-17 2
UNIPROTKB|Q9BL11 - symbol:herc-1 "Protein HERC-1" species... 194 1.0e-17 2
TAIR|locus:2205794 - symbol:AT1G27060 species:3702 "Arabi... 218 1.3e-17 2
UNIPROTKB|F1N7C1 - symbol:HERC6 "Uncharacterized protein"... 243 1.7e-17 1
TAIR|locus:2025277 - symbol:PRAF1 "AT1G76950" species:370... 242 2.5e-17 1
UNIPROTKB|Q9N1T2 - symbol:RPGR "X-linked retinitis pigmen... 241 2.9e-17 1
UNIPROTKB|F1PBB3 - symbol:HERC6 "Uncharacterized protein"... 241 2.9e-17 1
UNIPROTKB|F1NBC5 - symbol:HERC3 "Uncharacterized protein"... 241 3.1e-17 1
TAIR|locus:2144291 - symbol:AT5G11580 "AT5G11580" species... 217 3.2e-17 2
UNIPROTKB|E1B8U7 - symbol:RCCD1 "Uncharacterized protein"... 156 3.9e-17 2
UNIPROTKB|G3V2I3 - symbol:RCCD1 "RCC1 domain-containing p... 142 4.0e-17 2
UNIPROTKB|A6NED2 - symbol:RCCD1 "RCC1 domain-containing p... 142 4.1e-17 2
UNIPROTKB|E2QZC2 - symbol:NEK8 "Uncharacterized protein" ... 237 4.6e-17 1
UNIPROTKB|F1RMH6 - symbol:RCCD1 "Uncharacterized protein"... 160 5.4e-17 2
MGI|MGI:1914388 - symbol:Herc6 "hect domain and RLD 6" sp... 238 6.3e-17 1
TAIR|locus:2156233 - symbol:RUG2 "RCC1/UVR8/GEF-like 2" s... 150 6.5e-17 2
UNIPROTKB|E1B827 - symbol:NEK8 "Uncharacterized protein" ... 235 7.8e-17 1
RGD|1309901 - symbol:Rccd1 "RCC1 domain containing 1" spe... 141 1.1e-16 2
ZFIN|ZDB-GENE-081015-2 - symbol:rpgrb "retinitis pigmento... 236 1.7e-16 1
WARNING: Descriptions of 119 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2035423 [details] [associations]
symbol:AT1G19880 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 OMA:FGENKLG
IPI:IPI00543359 RefSeq:NP_173417.2 UniGene:At.16200
ProteinModelPortal:F4HQZ1 SMR:F4HQZ1 PRIDE:F4HQZ1
EnsemblPlants:AT1G19880.1 GeneID:838576 KEGG:ath:AT1G19880
Uniprot:F4HQZ1
Length = 538
Score = 1787 (634.1 bits), Expect = 3.2e-184, P = 3.2e-184
Identities = 321/397 (80%), Positives = 360/397 (90%)
Query: 22 LLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
LLFCG+T WD +G+RKGA++GNLVSPTRLRPLVGV+IRFVA GC S HCVA+DVEGRCYT
Sbjct: 22 LLFCGATAWDIIGKRKGAMEGNLVSPTRLRPLVGVNIRFVATGCASFHCVALDVEGRCYT 81
Query: 82 WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
WGRNE+GQLGHGD IQRDRPT+VS LSK+KI KA AGR+HTVVV++DG SL FGWNK+GQ
Sbjct: 82 WGRNEKGQLGHGDMIQRDRPTVVSGLSKHKIVKAAAGRNHTVVVSDDGQSLGFGWNKYGQ 141
Query: 142 LGSGSIRN-----EIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
LG GS +N E+E +P+ C+VS EVT ACGADFTVWLSS EGASIL AGLPQYGQL
Sbjct: 142 LGLGSAKNGFVSVEVESTPLPCVVSDEVTNVACGADFTVWLSSTEGASILTAGLPQYGQL 201
Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
GHGTDNE+N KDSSV+LAYEAQPRP+AIA+LAGETIVKVACGTNHTVAVD GYVYTWGF
Sbjct: 202 GHGTDNEFNMKDSSVRLAYEAQPRPKAIASLAGETIVKVACGTNHTVAVDKNGYVYTWGF 261
Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN 315
GGYGRLGHREQKDEW PRR+DVFQRNNVLPP A++SAGS NS+CTAGGGQLYMWGK+KNN
Sbjct: 262 GGYGRLGHREQKDEWAPRRIDVFQRNNVLPPNAILSAGSANSACTAGGGQLYMWGKIKNN 321
Query: 316 GDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMP 375
GDDWMYPKP+MDLSGWNLR MDSG+MHHFVGADSSCISWGHAQYGELGYGP GQKSSA P
Sbjct: 322 GDDWMYPKPMMDLSGWNLRWMDSGSMHHFVGADSSCISWGHAQYGELGYGPNGQKSSAAP 381
Query: 376 KKVDILEGMHVISVACGYGHSLVIVDRTNVGERLDQV 412
KKVD+LEGMHV+ VACG+ HS+VIVDRT++ +RL+Q+
Sbjct: 382 KKVDMLEGMHVMGVACGFCHSMVIVDRTDIADRLEQL 418
>UNIPROTKB|Q9P258 [details] [associations]
symbol:RCC2 "Protein RCC2" species:9606 "Homo sapiens"
[GO:0005874 "microtubule" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0000775 "chromosome, centromeric region"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005819
"spindle" evidence=IEA] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 Reactome:REACT_115566 Reactome:REACT_21300
GO:GO:0000775 GO:GO:0005730 GO:GO:0051301 GO:GO:0005819
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005874
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GO:GO:0000236 CTD:55920 HOGENOM:HOG000232061
HOVERGEN:HBG080538 OMA:FGENKLG OrthoDB:EOG4DNF4B EMBL:AJ421269
EMBL:AB040903 EMBL:BC004933 EMBL:BC042141 EMBL:BC053908
EMBL:AL359612 IPI:IPI00465044 PIR:T50630 RefSeq:NP_001129676.1
RefSeq:NP_061185.1 UniGene:Hs.380857 ProteinModelPortal:Q9P258
SMR:Q9P258 IntAct:Q9P258 STRING:Q9P258 PhosphoSite:Q9P258
DMDM:71152033 SWISS-2DPAGE:Q9P258 PaxDb:Q9P258 PeptideAtlas:Q9P258
PRIDE:Q9P258 Ensembl:ENST00000375433 Ensembl:ENST00000375436
GeneID:55920 KEGG:hsa:55920 UCSC:uc001bal.3 GeneCards:GC01M017733
HGNC:HGNC:30297 MIM:609587 neXtProt:NX_Q9P258 PharmGKB:PA142671091
InParanoid:Q9P258 GenomeRNAi:55920 NextBio:61323 Bgee:Q9P258
CleanEx:HS_RCC2 Genevestigator:Q9P258 GermOnline:ENSG00000179051
Uniprot:Q9P258
Length = 522
Score = 714 (256.4 bits), Expect = 1.6e-70, P = 1.6e-70
Identities = 161/403 (39%), Positives = 231/403 (57%)
Query: 22 LLFCGSTCWDAVGRRK-----GA---LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAV 73
LL G+T WD +GR++ A L NL P R L GV +R V +G + H + +
Sbjct: 106 LLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLAGVRVRTVVSGSCAAHSLLI 165
Query: 74 DVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLA 133
EG+ ++WGRNE+GQLGHGD + + P ++ LS I A GR+HT+ +TE G+ A
Sbjct: 166 TTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFA 225
Query: 134 FGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASILNAGLPQ 191
FG NK GQLG G+ + + PSP + + + +T ACGA+F++ + +G ++ + G P+
Sbjct: 226 FGENKMGQLGLGN-QTDAVPSPAQIMYNGQPITKMACGAEFSM-IMDCKG-NLYSFGCPE 282
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET-----------IVK-VACGTN 239
YGQLGH +D ++ + + ++ Y+ + PR +A +T +V+ VACG N
Sbjct: 283 YGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGAN 340
Query: 240 HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSVNS 297
HT+ +DS+ V++WGFGGYGRLGH EQKDE VPR V +F P I AG S
Sbjct: 341 HTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FPGRGASQIYAGYTCS 396
Query: 298 SCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHA 357
+ G L+ WG + + MYPK + DL GW +R + G V AD S ISWG +
Sbjct: 397 FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPS 456
Query: 358 Q-YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+GELGYG + KSS ++V L+G+ VA GY HSLVI
Sbjct: 457 PTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVI 499
Score = 177 (67.4 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 79/314 (25%), Positives = 137/314 (43%)
Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEV-TATACGADFT 173
+G+ +H++++T +G ++G N+ GQLG G + P + L EV + ACG + T
Sbjct: 155 SGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHT 214
Query: 174 VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
+ L+ E S+ G + GQLG G N+ + S ++ Y QP + A E +
Sbjct: 215 LALT--ETGSVFAFGENKMGQLGLG--NQTDAVPSPAQIMYNGQPITKM--ACGAEFSMI 268
Query: 234 VAC-GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEW----VPRRVDVF----QRNNVL 284
+ C G ++ G + G G+ R Q+ E+ VPRRV +F + +L
Sbjct: 269 MDCKGNLYSFGCPEYGQL---GHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQIL 325
Query: 285 P-PEAVI---SAGSVNSSCTAGGGQLYMWG-----KLKN-NGDDWMYPK--PLMDLSGWN 332
P P V+ + G+ ++ +++ WG +L + D M P+ L D G
Sbjct: 326 PVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRG 385
Query: 333 LRCMDSGNMHHFVGAD-SSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVAC 391
+ +G F ++ WG ++S+ PK V L G + S+AC
Sbjct: 386 ASQIYAGYTCSFAVSEVGGLFFWGATNTS--------RESTMYPKAVQDLCGWRIRSLAC 437
Query: 392 GYGHSLVIVDRTNV 405
G +V D + +
Sbjct: 438 GKSSIIVAADESTI 451
>MGI|MGI:1919784 [details] [associations]
symbol:Rcc2 "regulator of chromosome condensation 2"
species:10090 "Mus musculus" [GO:0000775 "chromosome, centromeric
region" evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0051301 "cell division"
evidence=IEA] MGI:MGI:1919784 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0000775 GO:GO:0005730 GO:GO:0051301
GO:GO:0007067 GO:GO:0005819 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0005874 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 EMBL:AL954710 eggNOG:COG5184
GeneTree:ENSGT00700000104160 CTD:55920 HOGENOM:HOG000232061
HOVERGEN:HBG080538 OMA:FGENKLG OrthoDB:EOG4DNF4B EMBL:AK076040
EMBL:BC086666 EMBL:AK129370 IPI:IPI00222509 RefSeq:NP_776292.1
UniGene:Mm.253 ProteinModelPortal:Q8BK67 SMR:Q8BK67 STRING:Q8BK67
PhosphoSite:Q8BK67 PaxDb:Q8BK67 PRIDE:Q8BK67
Ensembl:ENSMUST00000038893 Ensembl:ENSMUST00000071169 GeneID:108911
KEGG:mmu:108911 UCSC:uc008vna.2 InParanoid:A2AWQ3 ChiTaRS:RCC2
NextBio:361459 Bgee:Q8BK67 CleanEx:MM_RCC2 Genevestigator:Q8BK67
GermOnline:ENSMUSG00000040945 Uniprot:Q8BK67
Length = 520
Score = 712 (255.7 bits), Expect = 2.6e-70, P = 2.6e-70
Identities = 162/412 (39%), Positives = 234/412 (56%)
Query: 22 LLFCGSTCWDAVGRRK-----GA---LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAV 73
LL G+T WD +GR++ A L NL P R L GV +R V +G + H + +
Sbjct: 104 LLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSCAAHSLLI 163
Query: 74 DVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLA 133
EG+ ++WGRNE+GQLGHGD + + P ++ LS I A GR+HT+ +T+ G+ A
Sbjct: 164 TTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGSVFA 223
Query: 134 FGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASILNAGLPQ 191
FG NK GQLG G+ + + PSP + + + +T ACGA+F++ L +G ++ + G P+
Sbjct: 224 FGENKMGQLGLGN-QTDAVPSPAQIMYNGQPITKMACGAEFSM-LMDCKG-NLYSFGCPE 280
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET-----------IVK-VACGTN 239
YGQLGH +D ++ + + ++ Y+ + PR +A +T +V+ VACG N
Sbjct: 281 YGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGAN 338
Query: 240 HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSVNS 297
HT+ +DS+ V++WGFGGYGRLGH EQKDE VPR V +F P I AG S
Sbjct: 339 HTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FPGRGATQIYAGYTCS 394
Query: 298 SCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHA 357
+ G L+ WG + + MYPK + DL GW +R + G V AD S ISWG +
Sbjct: 395 FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPS 454
Query: 358 Q-YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGER 408
+GELGYG + KSS ++V L+G+ VA GY HSLVI + E+
Sbjct: 455 PTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIARDESEAEK 506
>ZFIN|ZDB-GENE-040426-2213 [details] [associations]
symbol:rcc2 "regulator of chromosome condensation
2" species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-040426-2213 GO:GO:0005730 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104160 EMBL:BC066628
IPI:IPI00486648 RefSeq:NP_998341.1 UniGene:Dr.828
ProteinModelPortal:Q6NYE2 STRING:Q6NYE2 PRIDE:Q6NYE2
Ensembl:ENSDART00000010647 GeneID:406455 KEGG:dre:406455 CTD:55920
HOGENOM:HOG000232061 HOVERGEN:HBG080538 InParanoid:Q6NYE2
OMA:FGENKLG OrthoDB:EOG4DNF4B NextBio:20818048 ArrayExpress:Q6NYE2
Bgee:Q6NYE2 Uniprot:Q6NYE2
Length = 495
Score = 663 (238.4 bits), Expect = 4.1e-65, P = 4.1e-65
Identities = 153/409 (37%), Positives = 221/409 (54%)
Query: 22 LLFCGSTCWDAVGRRK-----GA---LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAV 73
LL G+T WD +GR++ A L NL P R L V + V +G + H + +
Sbjct: 79 LLIFGATNWDLIGRKEVPKQQAAFRNLGQNLWGPHRYGCLSDVQVSCVVSGPCAAHSLII 138
Query: 74 DVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLA 133
EG+ ++WGRN++GQLGHGD + + P ++ L + I A GR+HT+ +TE+G
Sbjct: 139 TTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEEVIVAAACGRNHTLALTENGTVYT 198
Query: 134 FGWNKHGQLGSGSIRNEI-EPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQY 192
FG NK GQLG G+ + + P+ ++ + ACGA+F++ + +G ++ + G P+Y
Sbjct: 199 FGENKLGQLGQGNQTDAVLSPATIQYNGQPIVKVACGAEFSM-IVDCKG-NLYSFGCPEY 256
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI--------AALAGETIVK--VACGTNHTV 242
GQLGH +D ++ + ++ E PR AI L +V VACG NHT+
Sbjct: 257 GQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIEKTKDGQVLPVPNVVARDVACGANHTL 316
Query: 243 AVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSVNSSCT 300
+DS+ V++WGFGGYGRLGH EQKDE VPR V +F P I G S
Sbjct: 317 VLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FPGRGATQIYCGYQCSFAL 372
Query: 301 AGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQ-Y 359
+ G L+ WG + + MYPK + DL GW +R + G V AD S ISWG + +
Sbjct: 373 SEMGGLFFWGVTNTSRESTMYPKAVQDLCGWKIRSLACGKSSIIVAADDSTISWGPSPTF 432
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGER 408
GELGYG KSS ++V L+G++ V GY HSLVI + E+
Sbjct: 433 GELGYGDNKPKSSTTAQEVKTLDGVYSEQVVMGYSHSLVIARQDTEQEK 481
>FB|FBgn0031769 [details] [associations]
symbol:CG9135 species:7227 "Drosophila melanogaster"
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
[GO:0005875 "microtubule associated complex" evidence=IDA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005875 EMBL:AE014134
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GeneTree:ENSGT00700000104160 OMA:FGENKLG EMBL:AY058682
EMBL:AM294309 EMBL:AM294310 EMBL:AM294311 EMBL:AM294312
EMBL:AM294313 EMBL:AM294314 EMBL:AM294315 EMBL:AM294316
EMBL:AM294317 EMBL:AM294318 EMBL:FM245376 EMBL:FM245377
EMBL:FM245378 EMBL:FM245379 EMBL:FM245380 EMBL:FM245381
EMBL:FM245382 EMBL:FM245383 EMBL:FM245384 EMBL:FM245385
EMBL:FM245386 EMBL:FM245387 RefSeq:NP_608985.1 RefSeq:NP_723150.1
UniGene:Dm.4234 HSSP:P18754 SMR:Q9VMI5 IntAct:Q9VMI5
MINT:MINT-744911 STRING:Q9VMI5 EnsemblMetazoa:FBtr0079185
EnsemblMetazoa:FBtr0079186 GeneID:33850 KEGG:dme:Dmel_CG9135
UCSC:CG9135-RA FlyBase:FBgn0031769 InParanoid:Q9VMI5
OrthoDB:EOG4QV9T7 ChiTaRS:CG9135 GenomeRNAi:33850 NextBio:785598
Uniprot:Q9VMI5
Length = 487
Score = 639 (230.0 bits), Expect = 1.4e-62, P = 1.4e-62
Identities = 146/398 (36%), Positives = 214/398 (53%)
Query: 22 LLFCGSTCWDAVGRRKGALDGNLVSPT--RLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
+L G WD G+R + V P R+VA+G + H + ++++ +
Sbjct: 79 MLIAGMVTWDLTGKRDRK-NVTKVRPNLYSFHRFTEEKYRYVASGPSAAHTILINMDRKA 137
Query: 80 YTWGRNERGQLGHGDKIQ-RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
+GRN GQLG I+ ++PTI+ L + I +A GR HT+ +T+ G A G NK
Sbjct: 138 LGFGRNPSGQLGLSQDIKLAEKPTIIPALEQLNIVQAAVGRHHTLFLTDTGTVYACGENK 197
Query: 139 HGQLGSGSIRNEI-EPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
GQ G G+ I P+P+ + CGA+F+V L ++G S+ GLP+YGQLGH
Sbjct: 198 SGQCGVGNTHANIYSPTPINYRGPPIIRIGCGAEFSVILD-IKG-SLHTFGLPEYGQLGH 255
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRA----------IAALAGETIVKVACGTNHTVAVDSK 247
TD +Y + + +E P+ + + G IV ACG NHTVA+DSK
Sbjct: 256 NTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGVQIVDFACGNNHTVAIDSK 315
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
VY+WGFGG+GRLGH E KDE VPR + F +V GS S G L+
Sbjct: 316 KRVYSWGFGGFGRLGHAEPKDEMVPRLMKFFDTQG-RGGRSVF-CGSTFSLIVNELGLLF 373
Query: 308 MWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQ-YGELGYGP 366
++G+ K G+ MYPKP+ DLSGWN+ + N + AD + I+WG + +GELG G
Sbjct: 374 LFGQNKKTGEANMYPKPVQDLSGWNITDIGCANTSIMISADDTLIAWGASPTFGELGIGE 433
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTN 404
+ QKSS +PK+V L+ + + V GY H++++VD T+
Sbjct: 434 F-QKSSTVPKEVPKLDNIKIPQVTMGYSHTVLLVDTTH 470
>TAIR|locus:2163986 [details] [associations]
symbol:UVR8 "UVB-RESISTANCE 8" species:3702 "Arabidopsis
thaliana" [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=ISS]
[GO:0009411 "response to UV" evidence=IMP] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0010224 "response to UV-B"
evidence=IEP;IGI] [GO:0000785 "chromatin" evidence=IDA] [GO:0009649
"entrainment of circadian clock" evidence=IMP] [GO:0006007 "glucose
catabolic process" evidence=RCA] [GO:0042803 "protein
homodimerization activity" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005829 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009649 GO:GO:0000785 EMBL:AB007646
GO:GO:0003682 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0010224 eggNOG:COG5184 UniGene:At.49214
EMBL:AF130441 EMBL:AY125497 EMBL:BT000600 IPI:IPI00521473
PIR:T50662 RefSeq:NP_201191.1 PDB:4D9S PDB:4DNU PDB:4DNV PDB:4DNW
PDBsum:4D9S PDBsum:4DNU PDBsum:4DNV PDBsum:4DNW
ProteinModelPortal:Q9FN03 SMR:Q9FN03 DIP:DIP-59667N STRING:Q9FN03
PRIDE:Q9FN03 EnsemblPlants:AT5G63860.1 GeneID:836506
KEGG:ath:AT5G63860 TAIR:At5g63860 HOGENOM:HOG000240817
InParanoid:Q9FN03 OMA:GTLWCWG PhylomeDB:Q9FN03
ProtClustDB:CLSN2686209 Genevestigator:Q9FN03 Uniprot:Q9FN03
Length = 440
Score = 371 (135.7 bits), Expect = 3.6e-34, P = 3.6e-34
Identities = 111/355 (31%), Positives = 165/355 (46%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
+ ++AG + H VA+ +WGR E GQLGHGD R PT +S L ++I
Sbjct: 17 VLIISAG--ASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTC 74
Query: 118 GRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVW 175
G HTV ++ G + ++GW G+LG G+ + P P++ L + ACG D
Sbjct: 75 GADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACG-DSHCL 133
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
++EG + + G Q GQLG G +T+DS V P+ I A G I VA
Sbjct: 134 AVTMEG-EVQSWGRNQNGQLGLG-----DTEDSLV---------PQKIQAFEGIRIKMVA 178
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
G HT AV G +Y WG+G YG LG ++ D VP RV + A ++
Sbjct: 179 AGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERV-TSTGGEKMSMVACGWRHTI 237
Query: 296 NSSCTAGGGQLYMWGKLKN--NGD--DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSS 350
+ S + G Y W K +GD D + P L LS + + G H + +D
Sbjct: 238 SVSYS-GALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGK 296
Query: 351 CISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
WG ++G++G G P +V + V+ V+CG+ H+L + +R NV
Sbjct: 297 LYGWGWNKFGQVGVG--NNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNV 349
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 83/247 (33%), Positives = 123/247 (49%)
Query: 30 WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
W GR +L +P ++ L G+ I+ +A G HC+AV +EG +WGRN+ GQ
Sbjct: 94 WGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACG--DSHCLAVTMEGEVQSWGRNQNGQ 151
Query: 90 LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
LG GD P + +IK AG HT VTEDG+ +GW ++G LG G +
Sbjct: 152 LGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTD 211
Query: 150 EIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
+ P V E ++ ACG T+ +S GA + G +YGQLGHG D E D
Sbjct: 212 RLVPERVTSTGGEKMSMVACGWRHTISVS-YSGA-LYTYGWSKYGQLGHG-DLE----DH 264
Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
+ P + AL+ I +++ G HT+A+ S G +Y WG+ +G++G D
Sbjct: 265 LI---------PHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLD 315
Query: 269 EWVPRRV 275
+ P +V
Sbjct: 316 QCSPVQV 322
Score = 296 (109.3 bits), Expect = 3.6e-26, P = 3.6e-26
Identities = 93/353 (26%), Positives = 156/353 (44%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG-RCYTWGRNERGQLGHGDKIQRDRPTIV 104
SPT+L L G I V+ C + H VA G Y+WG + G+LGHG+ P +
Sbjct: 57 SPTQLSALDGHQI--VSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPI 114
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EV 163
L +IK+ G SH + VT +G ++G N++GQLG G + + P ++ +
Sbjct: 115 KALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRI 174
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
A GA+ T ++ E + G +YG LG G D + +L P +
Sbjct: 175 KMVAAGAEHTAAVT--EDGDLYGWGWGRYGNLGLG--------DRTDRLV------PERV 218
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
+ GE + VACG HT++V G +YT+G+ YG+LGH + +D +P +++ + +
Sbjct: 219 TSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFI 278
Query: 284 LPPEAVIS-AGSVNSSCTAGGGQLYMWGKLK-NNGDDWMYPKPLMDLSGWNLRCMDSGNM 341
++ S G +G++ N D P + + + G
Sbjct: 279 SQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWR 338
Query: 342 HHFVGAD-SSCISWGHAQYGELGYGPYGQKSSAMPKKVDILE-----GMHVIS 388
H + ++ +WG G+LG G ++ PK ++ L G H+ S
Sbjct: 339 HTLAVTERNNVFAWGRGTNGQLGIGESVDRN--FPKIIEALSVDGASGQHIES 389
Score = 267 (99.0 bits), Expect = 2.7e-21, P = 2.7e-21
Identities = 80/297 (26%), Positives = 138/297 (46%)
Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACG 169
K+ AG SH+V + ++G + GQLG G + P+ + L ++ + CG
Sbjct: 16 KVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCG 75
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
AD TV S G + + G +G+LGHG ++ T P P I AL G
Sbjct: 76 ADHTVAYSQ-SGMEVYSWGWGDFGRLGHGNSSDLFT------------PLP--IKALHGI 120
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ--RNNVLPPE 287
I ++ACG +H +AV +G V +WG G+LG + +D VP+++ F+ R ++
Sbjct: 121 RIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAG 180
Query: 288 AVISAGSVNSSCTAGGGQLYMWGKLKNNG--D--DWMYPKPLMDLSGWNLRCMDSGNMHH 343
A +A G G WG+ N G D D + P+ + G + + G H
Sbjct: 181 AEHTAAVTEDGDLYGWG----WGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHT 236
Query: 344 F-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
V + ++G ++YG+LG+G + +P K++ L + ++ G+ H++ +
Sbjct: 237 ISVSYSGALYTYGWSKYGQLGHGDL--EDHLIPHKLEALSNSFISQISGGWRHTMAL 291
>ZFIN|ZDB-GENE-070718-6 [details] [associations]
symbol:herc2 "hect domain and RLD 2" species:7955
"Danio rerio" [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0006464 "cellular protein modification
process" evidence=IEA] [GO:0020037 "heme binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00632
InterPro:IPR000433 InterPro:IPR000569 InterPro:IPR001199
InterPro:IPR009060 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-070718-6
GO:GO:0046872 GO:GO:0008270 GO:GO:0020037 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
SUPFAM:SSF46934 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 InterPro:IPR006624 SMART:SM00706
EMBL:CABZ01006344 EMBL:CABZ01006345 EMBL:CABZ01006346 EMBL:FP085470
IPI:IPI00495163 Ensembl:ENSDART00000110770 Uniprot:E7EYK8
Length = 4832
Score = 325 (119.5 bits), Expect = 6.6e-28, Sum P(2) = 6.6e-28
Identities = 88/272 (32%), Positives = 126/272 (46%)
Query: 34 GRRKGALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH 92
G R G VS PT L + V IR VA HC+A+ EG Y+WG E G+LGH
Sbjct: 4012 GGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGELYSWGEAEDGKLGH 4071
Query: 93 GDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE 152
G++ DRP ++ L ++ AG +H+ +T G +G ++G+LG G ++++
Sbjct: 4072 GNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELYTWGKGRYGRLGHGDSEDQLK 4131
Query: 153 PSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVK 211
P V L V ACG+ L + + + G YG+LG G + K
Sbjct: 4132 PKLVEALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSD-------GCK 4184
Query: 212 LAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV 271
+ P I +L G +VKV CG+ +VA+ G VYTWG G Y RLGH
Sbjct: 4185 V-------PMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR 4237
Query: 272 PRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
PR+V Q V+ A+ + CT G
Sbjct: 4238 PRQVQGLQGKKVI---AIATGSLHCVCCTEDG 4266
Score = 322 (118.4 bits), Expect = 1.4e-27, Sum P(2) = 1.4e-27
Identities = 106/374 (28%), Positives = 171/374 (45%)
Query: 38 GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DK 95
G L G+ + P+ L +++ VA G S AV EG+ Y G G+LG G
Sbjct: 2969 GGLKGSKIKVPSFSETLSALNVVQVAGGSKSLF--AVTAEGKVYACGEATNGRLGLGLSS 3026
Query: 96 IQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
P +S LS Y +KK +G H + +T DG ++G G+LG S N +P
Sbjct: 3027 GTIPIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKP 3086
Query: 154 SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
+ L ++ + ACG+ + ++S + + GL +YG+LGHG D++ +L
Sbjct: 3087 RLIEALKTKRIRDIACGSSHSAAITS--SGELYSWGLGEYGRLGHG--------DNTTQL 3136
Query: 213 AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
RP+ + L G +V+VACG+ T+A+ +G V++WG G +G+LG +
Sbjct: 3137 ------RPKLVKVLLGHRVVQVACGSRDAQTLALTDEGMVFSWGDGDFGKLGRGGSEGCN 3190
Query: 271 VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKPLM 326
+P+ ++ V I G+ S G ++ WGK +G D KP M
Sbjct: 3191 IPQNIERLNGQGVCQ----IECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQM 3246
Query: 327 --DLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
L G + + G +H ++ + +WG +G+ G G + P V LEG
Sbjct: 3247 VEGLRGKKIVHVAVGALHCLAVTETGQVFAWGDNDHGQQGNGT--TTVNRKPTLVQGLEG 3304
Query: 384 MHVISVACGYGHSL 397
+ VACG HS+
Sbjct: 3305 QKITRVACGSSHSV 3318
Score = 319 (117.4 bits), Expect = 2.8e-27, Sum P(2) = 2.8e-27
Identities = 95/331 (28%), Positives = 147/331 (44%)
Query: 77 GRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
G Y WG N RGQLG G K++ PT L+ + + G VT DG A
Sbjct: 3950 GTIYGWGHNHRGQLGGIEGAKVKVPTPT--EALATLRPVQLIGGEQTLFAVTADGKLYAT 4007
Query: 135 GWNKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
G+ G+LG G + P+ ++ + A G + LSS EG + + G +
Sbjct: 4008 GYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSS-EG-ELYSWGEAE 4065
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
G+LGHG + + RPR I +L G +V +A G H+ + + G +Y
Sbjct: 4066 DGKLGHGNRSPCD--------------RPRVIESLRGVEVVDIAAGGAHSACITASGELY 4111
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG- 310
TWG G YGRLGH + +D+ P+ V+ Q + V+ + +G + C ++ WG
Sbjct: 4112 TWGKGRYGRLGHGDSEDQLKPKLVEALQGHRVI--DVACGSGDAQTLCLTDDDMVWSWGD 4169
Query: 311 ----KLKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGY 364
KL G D P + L+G + ++ G+ S + +WG Y LG+
Sbjct: 4170 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4229
Query: 365 GPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
G P++V L+G VI++A G H
Sbjct: 4230 G--SDDHVRRPRQVQGLQGKKVIAIATGSLH 4258
Score = 295 (108.9 bits), Expect = 9.3e-25, Sum P(2) = 9.3e-25
Identities = 99/356 (27%), Positives = 158/356 (44%)
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
AV +G+ Y G G+LG G PT++ + I+K +G H + ++ +G
Sbjct: 3997 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEG 4056
Query: 130 NSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVS-EVTATACGADFTVWLSSVEGASILNA 187
++G + G+LG G+ R+ + P + L EV A G + +++ +
Sbjct: 4057 ELYSWGEAEDGKLGHGN-RSPCDRPRVIESLRGVEVVDIAAGGAHSACITA--SGELYTW 4113
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGHG DS E Q +P+ + AL G ++ VACG+ T+ +
Sbjct: 4114 GKGRYGRLGHG--------DS------EDQLKPKLVEALQGHRVIDVACGSGDAQTLCLT 4159
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG VP ++D V+ E GS S G
Sbjct: 4160 DDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC----GSQFSVALTKSGA 4215
Query: 306 LYMWGK-----LKNNGDDWMY-PKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQ 358
+Y WGK L + DD + P+ + L G + + +G++H D +WG
Sbjct: 4216 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4275
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLV--IVDRTNVGERLDQV 412
G+LG G + P+ V L+G + VACG H+L TN G+ QV
Sbjct: 4276 EGQLGDGT--TNAIQRPRLVAALQGKKINRVACGSAHTLAWSTSKPTNAGKLPAQV 4329
Score = 295 (108.9 bits), Expect = 2.4e-24, Sum P(2) = 2.4e-24
Identities = 91/321 (28%), Positives = 142/321 (44%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
++P + L I +AA H +A+ V G ++WG + G+LGHGD + PT++
Sbjct: 472 LAPMLVHALTSRKIMKLAAHPDGQHYLALSVNGEVFSWGCGDGGRLGHGDTTYLEEPTMI 531
Query: 105 SELSKYKIKKA----GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
S S + K G +++ +T DG +G +G+LG GS ++ P V L
Sbjct: 532 SVFSGRPVGKQVVHIACGSTYSAAITADGELHTWGRGNYGRLGHGSSEDQTTPMLVTALK 591
Query: 161 S-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
+V ACG+ L+ E + + G YG+LG G + T
Sbjct: 592 GLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------------- 637
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P+ + L IVKV CG+ +VA+ G VYTWG G RLGH + P+ +D Q
Sbjct: 638 PKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQ 697
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKL-KNNGDDWMY-----PKPLMDLSGWNL 333
V+ I+ GS + G+++ WG K D ++ PK L L+ ++
Sbjct: 698 GKRVVD----IAVGSTHCLALTEEGEVHSWGSNDKLQHFDTLFSNKKQPKALPGLNSKHI 753
Query: 334 RCMDSGNMHHFVGADSSCISW 354
+ G F + SSC W
Sbjct: 754 VGISCGPGQSF--SWSSCSEW 772
Score = 285 (105.4 bits), Expect = 1.8e-31, Sum P(3) = 1.8e-31
Identities = 65/238 (27%), Positives = 113/238 (47%)
Query: 29 CWDAVGRRKGA--LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNE 86
C +A R G G + P ++ L ++ VA H +A+ V+G+ ++WG +
Sbjct: 3012 CGEATNGRLGLGLSSGTIPIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGD 3071
Query: 87 RGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS 146
G+LGH ++ D+P ++ L +I+ G SH+ +T G ++G ++G+LG G
Sbjct: 3072 DGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGD 3131
Query: 147 IRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNT 205
++ P V+ L+ V ACG+ L+ + + + G +G+LG G N
Sbjct: 3132 NTTQLRPKLVKVLLGHRVVQVACGSRDAQTLALTDEGMVFSWGDGDFGKLGRGGSEGCNI 3191
Query: 206 KDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
P+ I L G+ + ++ CG ++A+ G V+TWG G Y RLGH
Sbjct: 3192 --------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3235
Score = 272 (100.8 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 94/349 (26%), Positives = 153/349 (43%)
Query: 72 AVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDG 129
A + + + WG N++ QLG G KI+ P+ LS + + G VT +G
Sbjct: 2950 AATIRTKVFVWGLNDKDQLGGLKGSKIKV--PSFSETLSALNVVQVAGGSKSLFAVTAEG 3007
Query: 130 NSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVSEVT---ATACGADFTVWLSSVEGASIL 185
A G +G+LG G I P + L + V A G + L+ V+G +
Sbjct: 3008 KVYACGEATNGRLGLGLSSGTIPIPRQISALSNYVVKKVAVHSGGRHAMALT-VDG-KVF 3065
Query: 186 NAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVD 245
+ G G+LGH ++ + +PR I AL + I +ACG++H+ A+
Sbjct: 3066 SWGEGDDGKLGH-----FSRMNCD---------KPRLIEALKTKRIRDIACGSSHSAAIT 3111
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GG 303
S G +Y+WG G YGRLGH + + P+ V V + V+ ++ GS ++ A
Sbjct: 3112 SSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVVQ----VACGSRDAQTLALTDE 3167
Query: 304 GQLYMWG-----KLKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGH 356
G ++ WG KL G + P+ + L+G + ++ G S + +WG
Sbjct: 3168 GMVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 3227
Query: 357 AQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
Y LG+G P+ V+ L G ++ VA G H L + + V
Sbjct: 3228 GDYFRLGHGT--DVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTETGQV 3274
Score = 266 (98.7 bits), Expect = 9.2e-19, Sum P(2) = 9.2e-19
Identities = 78/262 (29%), Positives = 116/262 (44%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L GV++ +AAG H + G YTWG+ G+LGHGD + +P +V
Sbjct: 4080 PRVIESLRGVEVVDIAAG--GAHSACITASGELYTWGKGRYGRLGHGDSEDQLKPKLVEA 4137
Query: 107 LSKYKI--KKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EV 163
L +++ G+G + T+ +T+D ++G +G+LG G P + L V
Sbjct: 4138 LQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGV 4197
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
CG+ F+V L+ GA + G Y +LGHG+D+ RPR +
Sbjct: 4198 VKVECGSQFSVALTK-SGA-VYTWGKGDYHRLGHGSDDHVR--------------RPRQV 4241
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR--- 280
L G+ ++ +A G+ H V G VYTWG G+LG PR V Q
Sbjct: 4242 QGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKI 4301
Query: 281 NNVLPPEAVISAGSVNSSCTAG 302
N V A A S + AG
Sbjct: 4302 NRVACGSAHTLAWSTSKPTNAG 4323
Score = 247 (92.0 bits), Expect = 7.4e-16, Sum P(2) = 7.4e-16
Identities = 85/312 (27%), Positives = 138/312 (44%)
Query: 101 PTIVSELSKYKIKKAGA--GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-- 156
P +V L+ KI K A H + ++ +G ++G G+LG G EP+ +
Sbjct: 474 PMLVHALTSRKIMKLAAHPDGQHYLALSVNGEVFSWGCGDGGRLGHGDTTYLEEPTMISV 533
Query: 157 ---RCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
R + +V ACG+ ++ +++ +G + G YG+LGHG+ + T
Sbjct: 534 FSGRPVGKQVVHIACGSTYSAAITA-DG-ELHTWGRGNYGRLGHGSSEDQTT-------- 583
Query: 214 YEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV 271
P + AL G ++ VACG+ T+AV G V++WG G YG+LG
Sbjct: 584 ------PMLVTALKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT 637
Query: 272 PRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN----NGDDW--MYPKPL 325
P+ V+ Q +++ + GS S GQ+Y WGK N +G D YPK L
Sbjct: 638 PKLVEKLQDLDIVK----VCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLL 693
Query: 326 MDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGM 384
L G + + G+ H + + SWG +L + + PK + L
Sbjct: 694 DSLQGKRVVDIAVGSTHCLALTEEGEVHSWGSND--KLQHFDTLFSNKKQPKALPGLNSK 751
Query: 385 HVISVACGYGHS 396
H++ ++CG G S
Sbjct: 752 HIVGISCGPGQS 763
Score = 242 (90.2 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 81/285 (28%), Positives = 126/285 (44%)
Query: 129 GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
G+ +GW N GQLG P+P L + G + T++ + +G +
Sbjct: 3948 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADG-KLYA 4006
Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
G G+LG G +T P + ++ I KVA G H +A+
Sbjct: 4007 TGYGAGGRLGIGGTESVST--------------PTLLESIQHVFIRKVAVNSGGKHCLAL 4052
Query: 245 DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
S+G +Y+WG G+LGH + PR ++ + V+ I+AG +S+C G
Sbjct: 4053 SSEGELYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVD----IAAGGAHSACITASG 4108
Query: 305 QLYMWGKLK----NNGD--DWMYPKPLMDLSGW---NLRCMDSGNMHHFVGADSSCI-SW 354
+LY WGK + +GD D + PK + L G ++ C SG+ D + SW
Sbjct: 4109 ELYTWGKGRYGRLGHGDSEDQLKPKLVEALQGHRVIDVAC-GSGDAQTLCLTDDDMVWSW 4167
Query: 355 GHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G YG+LG G G +P K+D L G+ V+ V CG S+ +
Sbjct: 4168 GDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4210
Score = 241 (89.9 bits), Expect = 2.7e-24, Sum P(2) = 2.7e-24
Identities = 70/232 (30%), Positives = 110/232 (47%)
Query: 29 CWDAVGRRKGALDGN-LVSPTRLRPLVG--VDIRFVAAGCVSCHCVAVDVEGRCYTWGRN 85
C D G R G D L PT + G V + V C S + A+ +G +TWGR
Sbjct: 511 CGD--GGRLGHGDTTYLEEPTMISVFSGRPVGKQVVHIACGSTYSAAITADGELHTWGRG 568
Query: 86 ERGQLGHGDKIQRDRPTIVSELSKYKI--KKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG 143
G+LGHG + P +V+ L K+ G+G + T+ VTE+G ++G +G+LG
Sbjct: 569 NYGRLGHGSSEDQTTPMLVTALKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG 628
Query: 144 SGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNE 202
G P V L ++ CG+ F+V L+ +G + G +LGHGTD
Sbjct: 629 RGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTK-DG-QVYTWGKGDNQRLGHGTDEH 686
Query: 203 YNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
+ Y P+ + +L G+ +V +A G+ H +A+ +G V++WG
Sbjct: 687 ---------VRY-----PKLLDSLQGKRVVDIAVGSTHCLALTEEGEVHSWG 724
Score = 235 (87.8 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 70/264 (26%), Positives = 118/264 (44%)
Query: 151 IEPSPVRCLVS-EVTATACGADFTVWLS-SVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
+ P V L S ++ A D +L+ SV G + + G G+LGHG D Y + +
Sbjct: 472 LAPMLVHALTSRKIMKLAAHPDGQHYLALSVNG-EVFSWGCGDGGRLGHG-DTTYLEEPT 529
Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
+ + + +P G+ +V +ACG+ ++ A+ + G ++TWG G YGRLGH +D
Sbjct: 530 MISV-FSGRP--------VGKQVVHIACGSTYSAAITADGELHTWGRGNYGRLGHGSSED 580
Query: 269 EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG-----KLKNNGDDWMY-P 322
+ P V + V+ + +G + GQ++ WG KL G D P
Sbjct: 581 QTTPMLVTALKGLKVI--DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTP 638
Query: 323 KPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDIL 381
K + L ++ + G+ + D +WG LG+G + PK +D L
Sbjct: 639 KLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGT--DEHVRYPKLLDSL 696
Query: 382 EGMHVISVACGYGHSLVIVDRTNV 405
+G V+ +A G H L + + V
Sbjct: 697 QGKRVVDIAVGSTHCLALTEEGEV 720
Score = 185 (70.2 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 57/164 (34%), Positives = 77/164 (46%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + V C S VA+ G YTWG+ + +LGHG
Sbjct: 4177 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4233
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSP 155
RP V L K+ G H V TEDG +G N GQLG G+ N I+ P
Sbjct: 4234 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTT-NAIQRPRL 4292
Query: 156 VRCLVSE-VTATACGADFTV-WLSSVE-GASILNAGLP-QYGQL 195
V L + + ACG+ T+ W +S A L A +P +Y L
Sbjct: 4293 VAALQGKKINRVACGSAHTLAWSTSKPTNAGKLPAQVPMEYNHL 4336
Score = 167 (63.8 bits), Expect = 4.5e-15, Sum P(3) = 4.5e-15
Identities = 38/117 (32%), Positives = 62/117 (52%)
Query: 65 CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVV 124
C + +A+ G +TWG+ + +LGHG + +P +V L KI G H +
Sbjct: 3208 CGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLA 3267
Query: 125 VTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVE 180
VTE G A+G N HGQ G+G+ +P+ V+ L + +T ACG+ +V ++V+
Sbjct: 3268 VTETGQVFAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVD 3324
Score = 144 (55.7 bits), Expect = 1.6e-12, Sum P(3) = 1.6e-12
Identities = 54/202 (26%), Positives = 90/202 (44%)
Query: 48 TRLRP-----LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
T+LRP L+G + VA G +A+ EG ++WG + G+LG G + P
Sbjct: 3134 TQLRPKLVKVLLGHRVVQVACGSRDAQTLALTDEGMVFSWGDGDFGKLGRGGSEGCNIPQ 3193
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE 162
+ L+ + + G ++ +T+ G +G + +LG G+ + +P V L +
Sbjct: 3194 NIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRGK 3253
Query: 163 -VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
+ A GA L+ E + G +GQ G+GT N K P
Sbjct: 3254 KIVHVAVGALHC--LAVTETGQVFAWGDNDHGQQGNGTTT-VNRK-------------PT 3297
Query: 222 AIAALAGETIVKVACGTNHTVA 243
+ L G+ I +VACG++H+VA
Sbjct: 3298 LVQGLEGQKITRVACGSSHSVA 3319
Score = 126 (49.4 bits), Expect = 1.8e-31, Sum P(3) = 1.8e-31
Identities = 44/168 (26%), Positives = 74/168 (44%)
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
T++ G +Y WG G+LG E VP + L P +I + T
Sbjct: 3943 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPTEALA---TLRPVQLIGGEQTLFAVT 3999
Query: 301 AGGGQLYMWG-----KLKNNGDDWMYPKPLMD-LSGWNLR--CMDSGNMHHF-VGADSSC 351
A G +LY G +L G + + L++ + +R ++SG H + ++
Sbjct: 4000 ADG-KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEL 4058
Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
SWG A+ G+LG+G + P+ ++ L G+ V+ +A G HS I
Sbjct: 4059 YSWGEAEDGKLGHG--NRSPCDRPRVIESLRGVEVVDIAAGGAHSACI 4104
Score = 42 (19.8 bits), Expect = 1.8e-31, Sum P(3) = 1.8e-31
Identities = 6/13 (46%), Positives = 8/13 (61%)
Query: 22 LLFCGSTCWDAVG 34
L+ CG CW + G
Sbjct: 2797 LIDCGEQCWQSSG 2809
Score = 38 (18.4 bits), Expect = 2.4e-24, Sum P(2) = 2.4e-24
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 388 SVACGYGHSLVIVDRTNVGERL 409
++ CG+ VI + TN+GE L
Sbjct: 1684 AMLCGWQR--VIPEGTNIGEPL 1703
>UNIPROTKB|E1BW48 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0020037
"heme binding" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] [GO:0032183 "SUMO binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR009060 InterPro:IPR010606
Pfam:PF00173 Pfam:PF00569 Pfam:PF06701 PROSITE:PS01357
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS51416
SMART:SM00119 SMART:SM00291 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005743 GO:GO:0046872 GO:GO:0008270
GO:GO:0006281 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 SUPFAM:SSF46934 Gene3D:2.30.30.30
InterPro:IPR021097 InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 OMA:QLAFTRD EMBL:AADN02017653
IPI:IPI00571031 Ensembl:ENSGALT00000027018 ArrayExpress:E1BW48
Uniprot:E1BW48
Length = 4841
Score = 339 (124.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 90/280 (32%), Positives = 133/280 (47%)
Query: 34 GRRKGALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH 92
G R G VS PT L + V I+ VA HC+A+ EG Y+WG E G+LGH
Sbjct: 4019 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 4078
Query: 93 GDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE 152
G++ DRP ++ L ++ AG +H+ +T G+ +G ++G+LG G ++++
Sbjct: 4079 GNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLK 4138
Query: 153 PSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVK 211
P V L V ACG+ L + ++ + G YG+LG G + K
Sbjct: 4139 PKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD-------GCK 4191
Query: 212 LAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV 271
+ P I +L +VKV CG+ +VA+ G VYTWG G Y RLGH
Sbjct: 4192 V-------PMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR 4244
Query: 272 PRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG-GQLYMWG 310
PR+V Q V+ A+ + CT G G++Y WG
Sbjct: 4245 PRQVQGLQGKKVI---AIATGSLHCVCCTEDGLGEVYTWG 4281
Score = 318 (117.0 bits), Expect = 2.0e-26, P = 2.0e-26
Identities = 104/374 (27%), Positives = 171/374 (45%)
Query: 38 GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
G L G+ + P+ L +++ VA G S AV VEG+ Y G G+LG G
Sbjct: 2977 GGLKGSKIKVPSFSETLSALNVVQVAGGSKSLF--AVTVEGKVYACGEATNGRLGLGISS 3034
Query: 97 QR-DRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
P ++ LS Y +KK +G H + +T DG ++G G+LG S N +P
Sbjct: 3035 GTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDKP 3094
Query: 154 SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
+ L ++ + ACG+ + ++S + GL +YG+LGHG D++ +L
Sbjct: 3095 RLIEALKTKRIRDIACGSSHSAAITS--SGELYTWGLGEYGRLGHG--------DNTTQL 3144
Query: 213 AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
+P+ + L G +++VACG+ T+A+ +G V++WG G +G+LG +
Sbjct: 3145 ------KPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 3198
Query: 271 VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKPLM 326
+P+ ++ V I G+ S G ++ WGK +G D KP +
Sbjct: 3199 IPQNIERLNGQGVCQ----IECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQV 3254
Query: 327 --DLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
L G + + G +H D+ + +WG +G+ G G + P V LEG
Sbjct: 3255 VEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEG 3312
Query: 384 MHVISVACGYGHSL 397
+ VACG HS+
Sbjct: 3313 QKITRVACGSSHSV 3326
Score = 302 (111.4 bits), Expect = 9.8e-25, P = 9.8e-25
Identities = 95/343 (27%), Positives = 151/343 (44%)
Query: 77 GRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
G Y WG N RGQLG G K++ PT L+ + + G VT DG A
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKV--PTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4014
Query: 135 GWNKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
G+ G+LG G + P+ ++ + + A G + LSS EG + + G +
Sbjct: 4015 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAE 4072
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
G+LGHG + + RPR I +L G +V +A G H+ + + G ++
Sbjct: 4073 DGKLGHGNRSPCD--------------RPRVIESLRGIEVVDIAAGGAHSACITAAGDLF 4118
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG- 310
TWG G YGRLGH + +D+ P+ V+ Q V+ + +G + C ++ WG
Sbjct: 4119 TWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVI--DIACGSGDAQTLCLTDDDTVWSWGD 4176
Query: 311 ----KLKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGY 364
KL G D P + L+ + ++ G+ S + +WG Y LG+
Sbjct: 4177 GDYGKLGRGGSDGCKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4236
Query: 365 GPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGE 407
G P++V L+G VI++A G H + + +GE
Sbjct: 4237 G--SDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE-DGLGE 4276
Score = 284 (105.0 bits), Expect = 6.3e-22, P = 6.3e-22
Identities = 93/341 (27%), Positives = 152/341 (44%)
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
AV +G+ Y G G+LG G PT++ + IKK +G H + ++ +G
Sbjct: 4004 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4063
Query: 130 NSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVS-EVTATACGADFTVWLSSVEGASILNA 187
++G + G+LG G+ R+ + P + L EV A G + +++ +
Sbjct: 4064 EVYSWGEAEDGKLGHGN-RSPCDRPRVIESLRGIEVVDIAAGGAHSACITAA--GDLFTW 4120
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGHG DS E Q +P+ + AL G ++ +ACG+ T+ +
Sbjct: 4121 GKGRYGRLGHG--------DS------EDQLKPKLVEALQGYRVIDIACGSGDAQTLCLT 4166
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG VP ++D V+ E GS S G
Sbjct: 4167 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTDLGVVKVEC----GSQFSVALTKSGA 4222
Query: 306 LYMWGK-----LKNNGDDWMY-PKPLMDLSGWNLRCMDSGNMHHFVGADSSC---ISWGH 356
+Y WGK L + DD + P+ + L G + + +G++H + +WG
Sbjct: 4223 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGLGEVYTWGD 4282
Query: 357 AQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G + VACG H+L
Sbjct: 4283 NDEGQLGDGT--TNAIQRPRLVAALQGKKINRVACGSAHTL 4321
Score = 283 (104.7 bits), Expect = 5.5e-30, Sum P(2) = 5.5e-30
Identities = 65/238 (27%), Positives = 113/238 (47%)
Query: 29 CWDAVGRRKGA--LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNE 86
C +A R G G + P ++ L ++ VA H +A+ V+G+ ++WG +
Sbjct: 3020 CGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGD 3079
Query: 87 RGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS 146
G+LGH ++ D+P ++ L +I+ G SH+ +T G +G ++G+LG G
Sbjct: 3080 DGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGD 3139
Query: 147 IRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNT 205
+++P V+ L+ V ACG+ L+ + + + G +G+LG G N
Sbjct: 3140 NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI 3199
Query: 206 KDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
P+ I L G+ + ++ CG ++A+ G V+TWG G Y RLGH
Sbjct: 3200 --------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3243
Score = 282 (104.3 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 101/363 (27%), Positives = 159/363 (43%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
+R AAG S A + + + WG N++ QLG G KI+ P+ LS + +
Sbjct: 2948 VRKKAAGLES----AATIRTKVFVWGLNDKDQLGGLKGSKIKV--PSFSETLSALNVVQV 3001
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVSEVT---ATACGAD 171
G VT +G A G +G+LG G + P + L + V A G
Sbjct: 3002 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGR 3061
Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
+ L+ V+G I + G G+LGH ++ + +PR I AL + I
Sbjct: 3062 HAMALT-VDG-KIFSWGEGDDGKLGH-----FSRMNCD---------KPRLIEALKTKRI 3105
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
+ACG++H+ A+ S G +YTWG G YGRLGH + + P+ V V + V+ ++
Sbjct: 3106 RDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VA 3161
Query: 292 AGSVNSSCTA--GGGQLYMWG-----KLKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHH 343
GS ++ A G ++ WG KL G + P+ + L+G + ++ G
Sbjct: 3162 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3221
Query: 344 FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
S + +WG Y LG+G P+ V+ L G ++ VA G H L + D
Sbjct: 3222 LALTKSGVVWTWGKGDYFRLGHGT--DVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDT 3279
Query: 403 TNV 405
V
Sbjct: 3280 GQV 3282
Score = 276 (102.2 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 74/277 (26%), Positives = 128/277 (46%)
Query: 39 ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
A + + + P ++ L +I +AA H +A+ G ++WG + G+LGHGD +
Sbjct: 477 AYNSDTLGPQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPL 536
Query: 99 DRPTIVSELSKYKIKK----AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
+ P ++S LS + K G +++ +T +G +G +G+LG GS ++ P
Sbjct: 537 EEPKLISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPM 596
Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
V L +V +CG+ L+ E + + G YG+LG G + T
Sbjct: 597 LVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 648
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P+ I L IVKV CG+ ++A+ G VYTWG G RLGH ++ P+
Sbjct: 649 ------PKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPK 702
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
++ + V+ ++AGS + +++ WG
Sbjct: 703 LLEGLKGKKVID----VAAGSTHCLALTEDSEVHSWG 735
Score = 238 (88.8 bits), Expect = 4.2e-16, P = 4.2e-16
Identities = 77/284 (27%), Positives = 132/284 (46%)
Query: 137 NKHGQLGSGSIRNE-IEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
+++G++ + + ++ + P V+ L S + A +D +L+ + + G G+
Sbjct: 468 SRNGRVYTQAYNSDTLGPQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGR 527
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKGYV 250
LGHG +V L P+ I+AL AG+ +V +ACG+ ++ A+ ++G +
Sbjct: 528 LGHG---------DTVPLE-----EPKLISALSGKQAGKHVVHIACGSTYSAAITAEGEL 573
Query: 251 YTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
YTWG G YGRLGH +D+ +P V + V+ + +G + GQ++ WG
Sbjct: 574 YTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVI--DVSCGSGDAQTLAVTENGQVWSWG 631
Query: 311 -----KLKNNGDDWMY-PK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGE 361
KL G D PK L DL +RC ++ + D +WG
Sbjct: 632 DGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIA--LTKDGQVYTWGKGDNQR 689
Query: 362 LGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G ++ PK ++ L+G VI VA G H L + + + V
Sbjct: 690 LGHGT--EEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEV 731
Score = 230 (86.0 bits), Expect = 3.4e-15, P = 3.4e-15
Identities = 90/352 (25%), Positives = 149/352 (42%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
V C + + GR YT N LG P +V L+ I K A
Sbjct: 455 VQIACAEKRFLILSRNGRVYTQAYNS-DTLG---------PQLVQSLASRNIVKIAAHSD 504
Query: 121 --HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-----VTATACGADFT 173
H + ++ +G ++G G+LG G EP + L + V ACG+ ++
Sbjct: 505 GHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVHIACGSTYS 564
Query: 174 VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
+++ EG + G YG+LGHG+ ++D ++ P + L G ++
Sbjct: 565 AAITA-EG-ELYTWGRGNYGRLGHGS-----SEDQTI---------PMLVTGLKGLKVID 608
Query: 234 VACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
V+CG+ T+AV G V++WG G YG+LG P+ ++ Q +++ +
Sbjct: 609 VSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVK----VR 664
Query: 292 AGSVNSSCTAGGGQLYMWGKLKN----NGDDW--MYPKPLMDLSGWNLRCMDSGNMHHF- 344
GS S GQ+Y WGK N +G + YPK L L G + + +G+ H
Sbjct: 665 CGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLA 724
Query: 345 VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
+ DS SWG + + + + P + L+ H++ +ACG S
Sbjct: 725 LTEDSEVHSWGSND--QCQHFDTLRITKPEPAALPGLDTKHIVGIACGPAQS 774
Score = 225 (84.3 bits), Expect = 6.0e-22, Sum P(2) = 6.0e-22
Identities = 67/232 (28%), Positives = 105/232 (45%)
Query: 29 CWDAVGRRKGALDG-NLVSPTRLRPLVGVDI--RFVAAGCVSCHCVAVDVEGRCYTWGRN 85
C D G R G D L P + L G V C S + A+ EG YTWGR
Sbjct: 522 CGD--GGRLGHGDTVPLEEPKLISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRG 579
Query: 86 ERGQLGHGDKIQRDRPTIVSELSKYKI--KKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG 143
G+LGHG + P +V+ L K+ G+G + T+ VTE+G ++G +G+LG
Sbjct: 580 NYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLG 639
Query: 144 SGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNE 202
G P + L ++ CG+ F++ L+ +G + G +LGHGT+
Sbjct: 640 RGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTK-DG-QVYTWGKGDNQRLGHGTEEH 697
Query: 203 YNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
+ Y P+ + L G+ ++ VA G+ H +A+ V++WG
Sbjct: 698 ---------VRY-----PKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 172 (65.6 bits), Expect = 9.6e-09, P = 9.6e-09
Identities = 56/159 (35%), Positives = 74/159 (46%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L D+ V C S VA+ G YTWG+ + +LGHG
Sbjct: 4184 RGGSDGCKV-PMKIDSLT--DLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4240
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW--NKHGQLGSGSIRNEIE-P 153
RP V L K+ G H V TEDG + W N GQLG G+ N I+ P
Sbjct: 4241 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGLGEVYTWGDNDEGQLGDGTT-NAIQRP 4299
Query: 154 SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAG-LP 190
V L + + ACG+ T+ S+ + A NAG LP
Sbjct: 4300 RLVAALQGKKINRVACGSAHTLAWSTSKPA---NAGKLP 4335
Score = 167 (63.8 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 38/120 (31%), Positives = 64/120 (53%)
Query: 65 CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVV 124
C + +A+ G +TWG+ + +LGHG + +P +V L KI G H +
Sbjct: 3216 CGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3275
Query: 125 VTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGAS 183
VT+ G A+G N HGQ G+G+ +P+ V+ L + +T ACG+ +V ++V+ A+
Sbjct: 3276 VTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVAT 3335
Score = 163 (62.4 bits), Expect = 9.4e-08, P = 9.4e-08
Identities = 55/200 (27%), Positives = 86/200 (43%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
+ P + L G + +A G + + + ++WG + G+LG G P +
Sbjct: 4137 LKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKI 4196
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L+ + K G +V +T+ G +G + +LG GS + P V+ L + V
Sbjct: 4197 DSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKV 4256
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
A A G+ V + + G GQLG GT N A RPR +
Sbjct: 4257 IAIATGSLHCVCCTEDGLGEVYTWGDNDEGQLGDGTTN--------------AIQRPRLV 4302
Query: 224 AALAGETIVKVACGTNHTVA 243
AAL G+ I +VACG+ HT+A
Sbjct: 4303 AALQGKKINRVACGSAHTLA 4322
Score = 144 (55.7 bits), Expect = 8.1e-13, Sum P(2) = 8.1e-13
Identities = 43/147 (29%), Positives = 69/147 (46%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG +P + L +DI V C S +A+ +G+ YTWG+ + +LGHG +
Sbjct: 640 RGGSDG-CKTPKLIEKLQDLDI--VKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEE 696
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIR-NEIEPSP 155
P ++ L K+ AG +H + +TED ++G N Q ++R + EP+
Sbjct: 697 HVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-HFDTLRITKPEPAA 755
Query: 156 VRCL-VSEVTATACG-ADFTVWLSSVE 180
+ L + ACG A W S E
Sbjct: 756 LPGLDTKHIVGIACGPAQSFAWSSCSE 782
Score = 141 (54.7 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 50/200 (25%), Positives = 89/200 (44%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
+ P ++ L+G + VA G +A+ EG ++WG + G+LG G + P +
Sbjct: 3144 LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNI 3203
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L+ + + G ++ +T+ G +G + +LG G+ + +P V L + +
Sbjct: 3204 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKI 3263
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
A GA L+ + + G +GQ G+GT N K P +
Sbjct: 3264 VHVAVGALHC--LAVTDTGQVYAWGDNDHGQQGNGTTT-VNRK-------------PTLV 3307
Query: 224 AALAGETIVKVACGTNHTVA 243
L G+ I +VACG++H+VA
Sbjct: 3308 QGLEGQKITRVACGSSHSVA 3327
Score = 135 (52.6 bits), Expect = 0.00011, P = 0.00011
Identities = 61/267 (22%), Positives = 99/267 (37%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D ++ P + L G I VA G + HC+AV G+ Y WG N+ GQ G+G +
Sbjct: 3246 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRK 3303
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC-L 159
PT+V L KI + G SH+V W + + S+ + R L
Sbjct: 3304 PTLVQGLEGQKITRVACGSSHSVA-----------WTTV-DVATPSVHEPVLFQTARDPL 3351
Query: 160 VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD--SSVKLAYEAQ 217
+ AD + + + GA+ P ++ D + S + +A +
Sbjct: 3352 GASYLGVPSDADSSAASNKISGANSSKPNRPSLAKILLSLDGNVAKQQALSHILMALQIM 3411
Query: 218 -PRPRAIAALA-GETIVKVACGTNHTVAVDSKGYVYTWGFGG----YGRLGHREQKDEWV 271
R + AL I V C ++ + G G + R + W
Sbjct: 3412 YARDAVVGALMPASMIAPVECPSSSPAPPSDATSTGSPASGDECMIVGDIEERLSPNPWQ 3471
Query: 272 PRRVDVFQRNNVLPPEAVISAGSVNSS 298
RR +V + + P AV + + SS
Sbjct: 3472 DRRGEVVSSEDAVTPSAVTPSAAAASS 3498
Score = 129 (50.5 bits), Expect = 3.6e-11, Sum P(2) = 3.6e-11
Identities = 49/201 (24%), Positives = 88/201 (43%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L G+ + V+ G +AV G+ ++WG + G+LG G P ++ +
Sbjct: 595 PMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK 654
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTA 165
L I K G ++ +T+DG +G + +LG G+ + P + L + V
Sbjct: 655 LQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVID 714
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
A G+ T L+ E + + + G Q H ++T +++ +P P A+
Sbjct: 715 VAAGS--THCLALTEDSEVHSWG--SNDQCQH-----FDT----LRIT---KPEPAALPG 758
Query: 226 LAGETIVKVACGTNHTVAVDS 246
L + IV +ACG + A S
Sbjct: 759 LDTKHIVGIACGPAQSFAWSS 779
Score = 122 (48.0 bits), Expect = 5.5e-30, Sum P(2) = 5.5e-30
Identities = 43/168 (25%), Positives = 74/168 (44%)
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
T++ G +Y WG G+LG E VP + L P +I + T
Sbjct: 3950 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA---TLRPVQLIGGEQTLFAVT 4006
Query: 301 AGGGQLYMWG-----KLKNNGDDWMYPKPLMD-LSGWNLR--CMDSGNMHHF-VGADSSC 351
A G +LY G +L G + + L++ + ++ ++SG H + ++
Sbjct: 4007 ADG-KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4065
Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
SWG A+ G+LG+G + P+ ++ L G+ V+ +A G HS I
Sbjct: 4066 YSWGEAEDGKLGHG--NRSPCDRPRVIESLRGIEVVDIAAGGAHSACI 4111
>UNIPROTKB|E1C8K2 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR009060 InterPro:IPR010606
Pfam:PF00173 Pfam:PF00569 Pfam:PF06701 PROSITE:PS01357
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS51416
SMART:SM00119 SMART:SM00291 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0046872 GO:GO:0008270 GO:GO:0020037 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
SUPFAM:SSF46934 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 EMBL:AADN02017653 IPI:IPI00818548
Ensembl:ENSGALT00000036596 ArrayExpress:E1C8K2 Uniprot:E1C8K2
Length = 4841
Score = 339 (124.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 90/280 (32%), Positives = 133/280 (47%)
Query: 34 GRRKGALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH 92
G R G VS PT L + V I+ VA HC+A+ EG Y+WG E G+LGH
Sbjct: 4019 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 4078
Query: 93 GDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE 152
G++ DRP ++ L ++ AG +H+ +T G+ +G ++G+LG G ++++
Sbjct: 4079 GNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLK 4138
Query: 153 PSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVK 211
P V L V ACG+ L + ++ + G YG+LG G + K
Sbjct: 4139 PKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD-------GCK 4191
Query: 212 LAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV 271
+ P I +L +VKV CG+ +VA+ G VYTWG G Y RLGH
Sbjct: 4192 V-------PMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR 4244
Query: 272 PRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG-GQLYMWG 310
PR+V Q V+ A+ + CT G G++Y WG
Sbjct: 4245 PRQVQGLQGKKVI---AIATGSLHCVCCTEDGLGEVYTWG 4281
Score = 318 (117.0 bits), Expect = 2.0e-26, P = 2.0e-26
Identities = 104/374 (27%), Positives = 171/374 (45%)
Query: 38 GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
G L G+ + P+ L +++ VA G S AV VEG+ Y G G+LG G
Sbjct: 2977 GGLKGSKIKVPSFSETLSALNVVQVAGGSKSLF--AVTVEGKVYACGEATNGRLGLGISS 3034
Query: 97 QR-DRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
P ++ LS Y +KK +G H + +T DG ++G G+LG S N +P
Sbjct: 3035 GTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDKP 3094
Query: 154 SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
+ L ++ + ACG+ + ++S + GL +YG+LGHG D++ +L
Sbjct: 3095 RLIEALKTKRIRDIACGSSHSAAITS--SGELYTWGLGEYGRLGHG--------DNTTQL 3144
Query: 213 AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
+P+ + L G +++VACG+ T+A+ +G V++WG G +G+LG +
Sbjct: 3145 ------KPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 3198
Query: 271 VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKPLM 326
+P+ ++ V I G+ S G ++ WGK +G D KP +
Sbjct: 3199 IPQNIERLNGQGVCQ----IECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQV 3254
Query: 327 --DLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
L G + + G +H D+ + +WG +G+ G G + P V LEG
Sbjct: 3255 VEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEG 3312
Query: 384 MHVISVACGYGHSL 397
+ VACG HS+
Sbjct: 3313 QKITRVACGSSHSV 3326
Score = 302 (111.4 bits), Expect = 9.8e-25, P = 9.8e-25
Identities = 95/343 (27%), Positives = 151/343 (44%)
Query: 77 GRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
G Y WG N RGQLG G K++ PT L+ + + G VT DG A
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKV--PTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4014
Query: 135 GWNKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
G+ G+LG G + P+ ++ + + A G + LSS EG + + G +
Sbjct: 4015 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAE 4072
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
G+LGHG + + RPR I +L G +V +A G H+ + + G ++
Sbjct: 4073 DGKLGHGNRSPCD--------------RPRVIESLRGIEVVDIAAGGAHSACITAAGDLF 4118
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG- 310
TWG G YGRLGH + +D+ P+ V+ Q V+ + +G + C ++ WG
Sbjct: 4119 TWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVI--DIACGSGDAQTLCLTDDDTVWSWGD 4176
Query: 311 ----KLKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGY 364
KL G D P + L+ + ++ G+ S + +WG Y LG+
Sbjct: 4177 GDYGKLGRGGSDGCKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4236
Query: 365 GPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGE 407
G P++V L+G VI++A G H + + +GE
Sbjct: 4237 G--SDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE-DGLGE 4276
Score = 284 (105.0 bits), Expect = 6.3e-22, P = 6.3e-22
Identities = 93/341 (27%), Positives = 152/341 (44%)
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
AV +G+ Y G G+LG G PT++ + IKK +G H + ++ +G
Sbjct: 4004 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4063
Query: 130 NSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVS-EVTATACGADFTVWLSSVEGASILNA 187
++G + G+LG G+ R+ + P + L EV A G + +++ +
Sbjct: 4064 EVYSWGEAEDGKLGHGN-RSPCDRPRVIESLRGIEVVDIAAGGAHSACITAA--GDLFTW 4120
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGHG DS E Q +P+ + AL G ++ +ACG+ T+ +
Sbjct: 4121 GKGRYGRLGHG--------DS------EDQLKPKLVEALQGYRVIDIACGSGDAQTLCLT 4166
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG VP ++D V+ E GS S G
Sbjct: 4167 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTDLGVVKVEC----GSQFSVALTKSGA 4222
Query: 306 LYMWGK-----LKNNGDDWMY-PKPLMDLSGWNLRCMDSGNMHHFVGADSSC---ISWGH 356
+Y WGK L + DD + P+ + L G + + +G++H + +WG
Sbjct: 4223 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGLGEVYTWGD 4282
Query: 357 AQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G + VACG H+L
Sbjct: 4283 NDEGQLGDGT--TNAIQRPRLVAALQGKKINRVACGSAHTL 4321
Score = 283 (104.7 bits), Expect = 5.5e-30, Sum P(2) = 5.5e-30
Identities = 65/238 (27%), Positives = 113/238 (47%)
Query: 29 CWDAVGRRKGA--LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNE 86
C +A R G G + P ++ L ++ VA H +A+ V+G+ ++WG +
Sbjct: 3020 CGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGD 3079
Query: 87 RGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS 146
G+LGH ++ D+P ++ L +I+ G SH+ +T G +G ++G+LG G
Sbjct: 3080 DGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGD 3139
Query: 147 IRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNT 205
+++P V+ L+ V ACG+ L+ + + + G +G+LG G N
Sbjct: 3140 NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI 3199
Query: 206 KDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
P+ I L G+ + ++ CG ++A+ G V+TWG G Y RLGH
Sbjct: 3200 --------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3243
Score = 282 (104.3 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 101/363 (27%), Positives = 159/363 (43%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
+R AAG S A + + + WG N++ QLG G KI+ P+ LS + +
Sbjct: 2948 VRKKAAGLES----AATIRTKVFVWGLNDKDQLGGLKGSKIKV--PSFSETLSALNVVQV 3001
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVSEVT---ATACGAD 171
G VT +G A G +G+LG G + P + L + V A G
Sbjct: 3002 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGR 3061
Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
+ L+ V+G I + G G+LGH ++ + +PR I AL + I
Sbjct: 3062 HAMALT-VDG-KIFSWGEGDDGKLGH-----FSRMNCD---------KPRLIEALKTKRI 3105
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
+ACG++H+ A+ S G +YTWG G YGRLGH + + P+ V V + V+ ++
Sbjct: 3106 RDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VA 3161
Query: 292 AGSVNSSCTA--GGGQLYMWG-----KLKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHH 343
GS ++ A G ++ WG KL G + P+ + L+G + ++ G
Sbjct: 3162 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3221
Query: 344 FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
S + +WG Y LG+G P+ V+ L G ++ VA G H L + D
Sbjct: 3222 LALTKSGVVWTWGKGDYFRLGHGT--DVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDT 3279
Query: 403 TNV 405
V
Sbjct: 3280 GQV 3282
Score = 276 (102.2 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 74/277 (26%), Positives = 128/277 (46%)
Query: 39 ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
A + + + P ++ L +I +AA H +A+ G ++WG + G+LGHGD +
Sbjct: 477 AYNSDTLGPQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPL 536
Query: 99 DRPTIVSELSKYKIKK----AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
+ P ++S LS + K G +++ +T +G +G +G+LG GS ++ P
Sbjct: 537 EEPKLISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPM 596
Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
V L +V +CG+ L+ E + + G YG+LG G + T
Sbjct: 597 LVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 648
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P+ I L IVKV CG+ ++A+ G VYTWG G RLGH ++ P+
Sbjct: 649 ------PKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPK 702
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
++ + V+ ++AGS + +++ WG
Sbjct: 703 LLEGLKGKKVID----VAAGSTHCLALTEDSEVHSWG 735
Score = 238 (88.8 bits), Expect = 4.2e-16, P = 4.2e-16
Identities = 77/284 (27%), Positives = 132/284 (46%)
Query: 137 NKHGQLGSGSIRNE-IEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
+++G++ + + ++ + P V+ L S + A +D +L+ + + G G+
Sbjct: 468 SRNGRVYTQAYNSDTLGPQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGR 527
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKGYV 250
LGHG +V L P+ I+AL AG+ +V +ACG+ ++ A+ ++G +
Sbjct: 528 LGHG---------DTVPLE-----EPKLISALSGKQAGKHVVHIACGSTYSAAITAEGEL 573
Query: 251 YTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
YTWG G YGRLGH +D+ +P V + V+ + +G + GQ++ WG
Sbjct: 574 YTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVI--DVSCGSGDAQTLAVTENGQVWSWG 631
Query: 311 -----KLKNNGDDWMY-PK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGE 361
KL G D PK L DL +RC ++ + D +WG
Sbjct: 632 DGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIA--LTKDGQVYTWGKGDNQR 689
Query: 362 LGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G ++ PK ++ L+G VI VA G H L + + + V
Sbjct: 690 LGHGT--EEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEV 731
Score = 230 (86.0 bits), Expect = 3.4e-15, P = 3.4e-15
Identities = 90/352 (25%), Positives = 149/352 (42%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
V C + + GR YT N LG P +V L+ I K A
Sbjct: 455 VQIACAEKRFLILSRNGRVYTQAYNS-DTLG---------PQLVQSLASRNIVKIAAHSD 504
Query: 121 --HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-----VTATACGADFT 173
H + ++ +G ++G G+LG G EP + L + V ACG+ ++
Sbjct: 505 GHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVHIACGSTYS 564
Query: 174 VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
+++ EG + G YG+LGHG+ ++D ++ P + L G ++
Sbjct: 565 AAITA-EG-ELYTWGRGNYGRLGHGS-----SEDQTI---------PMLVTGLKGLKVID 608
Query: 234 VACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
V+CG+ T+AV G V++WG G YG+LG P+ ++ Q +++ +
Sbjct: 609 VSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVK----VR 664
Query: 292 AGSVNSSCTAGGGQLYMWGKLKN----NGDDW--MYPKPLMDLSGWNLRCMDSGNMHHF- 344
GS S GQ+Y WGK N +G + YPK L L G + + +G+ H
Sbjct: 665 CGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLA 724
Query: 345 VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
+ DS SWG + + + + P + L+ H++ +ACG S
Sbjct: 725 LTEDSEVHSWGSND--QCQHFDTLRITKPEPAALPGLDTKHIVGIACGPAQS 774
Score = 225 (84.3 bits), Expect = 6.0e-22, Sum P(2) = 6.0e-22
Identities = 67/232 (28%), Positives = 105/232 (45%)
Query: 29 CWDAVGRRKGALDG-NLVSPTRLRPLVGVDI--RFVAAGCVSCHCVAVDVEGRCYTWGRN 85
C D G R G D L P + L G V C S + A+ EG YTWGR
Sbjct: 522 CGD--GGRLGHGDTVPLEEPKLISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRG 579
Query: 86 ERGQLGHGDKIQRDRPTIVSELSKYKI--KKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG 143
G+LGHG + P +V+ L K+ G+G + T+ VTE+G ++G +G+LG
Sbjct: 580 NYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLG 639
Query: 144 SGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNE 202
G P + L ++ CG+ F++ L+ +G + G +LGHGT+
Sbjct: 640 RGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTK-DG-QVYTWGKGDNQRLGHGTEEH 697
Query: 203 YNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
+ Y P+ + L G+ ++ VA G+ H +A+ V++WG
Sbjct: 698 ---------VRY-----PKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 172 (65.6 bits), Expect = 9.6e-09, P = 9.6e-09
Identities = 56/159 (35%), Positives = 74/159 (46%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L D+ V C S VA+ G YTWG+ + +LGHG
Sbjct: 4184 RGGSDGCKV-PMKIDSLT--DLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4240
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW--NKHGQLGSGSIRNEIE-P 153
RP V L K+ G H V TEDG + W N GQLG G+ N I+ P
Sbjct: 4241 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGLGEVYTWGDNDEGQLGDGTT-NAIQRP 4299
Query: 154 SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAG-LP 190
V L + + ACG+ T+ S+ + A NAG LP
Sbjct: 4300 RLVAALQGKKINRVACGSAHTLAWSTSKPA---NAGKLP 4335
Score = 167 (63.8 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 38/120 (31%), Positives = 64/120 (53%)
Query: 65 CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVV 124
C + +A+ G +TWG+ + +LGHG + +P +V L KI G H +
Sbjct: 3216 CGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3275
Query: 125 VTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGAS 183
VT+ G A+G N HGQ G+G+ +P+ V+ L + +T ACG+ +V ++V+ A+
Sbjct: 3276 VTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVAT 3335
Score = 163 (62.4 bits), Expect = 9.4e-08, P = 9.4e-08
Identities = 55/200 (27%), Positives = 86/200 (43%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
+ P + L G + +A G + + + ++WG + G+LG G P +
Sbjct: 4137 LKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKI 4196
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L+ + K G +V +T+ G +G + +LG GS + P V+ L + V
Sbjct: 4197 DSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKV 4256
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
A A G+ V + + G GQLG GT N A RPR +
Sbjct: 4257 IAIATGSLHCVCCTEDGLGEVYTWGDNDEGQLGDGTTN--------------AIQRPRLV 4302
Query: 224 AALAGETIVKVACGTNHTVA 243
AAL G+ I +VACG+ HT+A
Sbjct: 4303 AALQGKKINRVACGSAHTLA 4322
Score = 144 (55.7 bits), Expect = 8.1e-13, Sum P(2) = 8.1e-13
Identities = 43/147 (29%), Positives = 69/147 (46%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG +P + L +DI V C S +A+ +G+ YTWG+ + +LGHG +
Sbjct: 640 RGGSDG-CKTPKLIEKLQDLDI--VKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEE 696
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIR-NEIEPSP 155
P ++ L K+ AG +H + +TED ++G N Q ++R + EP+
Sbjct: 697 HVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-HFDTLRITKPEPAA 755
Query: 156 VRCL-VSEVTATACG-ADFTVWLSSVE 180
+ L + ACG A W S E
Sbjct: 756 LPGLDTKHIVGIACGPAQSFAWSSCSE 782
Score = 141 (54.7 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 50/200 (25%), Positives = 89/200 (44%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
+ P ++ L+G + VA G +A+ EG ++WG + G+LG G + P +
Sbjct: 3144 LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNI 3203
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L+ + + G ++ +T+ G +G + +LG G+ + +P V L + +
Sbjct: 3204 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKI 3263
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
A GA L+ + + G +GQ G+GT N K P +
Sbjct: 3264 VHVAVGALHC--LAVTDTGQVYAWGDNDHGQQGNGTTT-VNRK-------------PTLV 3307
Query: 224 AALAGETIVKVACGTNHTVA 243
L G+ I +VACG++H+VA
Sbjct: 3308 QGLEGQKITRVACGSSHSVA 3327
Score = 135 (52.6 bits), Expect = 0.00011, P = 0.00011
Identities = 61/267 (22%), Positives = 99/267 (37%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D ++ P + L G I VA G + HC+AV G+ Y WG N+ GQ G+G +
Sbjct: 3246 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRK 3303
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC-L 159
PT+V L KI + G SH+V W + + S+ + R L
Sbjct: 3304 PTLVQGLEGQKITRVACGSSHSVA-----------WTTV-DVATPSVHEPVLFQTARDPL 3351
Query: 160 VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD--SSVKLAYEAQ 217
+ AD + + + GA+ P ++ D + S + +A +
Sbjct: 3352 GASYLGVPSDADSSAASNKISGANSSKPNRPSLAKILLSLDGNVAKQQALSHILMALQIM 3411
Query: 218 -PRPRAIAALA-GETIVKVACGTNHTVAVDSKGYVYTWGFGG----YGRLGHREQKDEWV 271
R + AL I V C ++ + G G + R + W
Sbjct: 3412 YARDAVVGALMPASMIAPVECPSSSPAPPSDATSTGSPASGDECMIVGDIEERLSPNPWQ 3471
Query: 272 PRRVDVFQRNNVLPPEAVISAGSVNSS 298
RR +V + + P AV + + SS
Sbjct: 3472 DRRGEVVSSEDAVTPSAVTPSAAAASS 3498
Score = 129 (50.5 bits), Expect = 3.6e-11, Sum P(2) = 3.6e-11
Identities = 49/201 (24%), Positives = 88/201 (43%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L G+ + V+ G +AV G+ ++WG + G+LG G P ++ +
Sbjct: 595 PMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK 654
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTA 165
L I K G ++ +T+DG +G + +LG G+ + P + L + V
Sbjct: 655 LQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVID 714
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
A G+ T L+ E + + + G Q H ++T +++ +P P A+
Sbjct: 715 VAAGS--THCLALTEDSEVHSWG--SNDQCQH-----FDT----LRIT---KPEPAALPG 758
Query: 226 LAGETIVKVACGTNHTVAVDS 246
L + IV +ACG + A S
Sbjct: 759 LDTKHIVGIACGPAQSFAWSS 779
Score = 122 (48.0 bits), Expect = 5.5e-30, Sum P(2) = 5.5e-30
Identities = 43/168 (25%), Positives = 74/168 (44%)
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
T++ G +Y WG G+LG E VP + L P +I + T
Sbjct: 3950 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA---TLRPVQLIGGEQTLFAVT 4006
Query: 301 AGGGQLYMWG-----KLKNNGDDWMYPKPLMD-LSGWNLR--CMDSGNMHHF-VGADSSC 351
A G +LY G +L G + + L++ + ++ ++SG H + ++
Sbjct: 4007 ADG-KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4065
Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
SWG A+ G+LG+G + P+ ++ L G+ V+ +A G HS I
Sbjct: 4066 YSWGEAEDGKLGHG--NRSPCDRPRVIESLRGIEVVDIAAGGAHSACI 4111
>RGD|1307989 [details] [associations]
symbol:Herc2 "HECT and RLD domain containing E3 ubiquitin
protein ligase 2" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IBA] [GO:0005634
"nucleus" evidence=ISO;IBA] [GO:0005737 "cytoplasm"
evidence=ISO;IBA] [GO:0005743 "mitochondrial inner membrane"
evidence=ISO] [GO:0006281 "DNA repair" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=ISO] [GO:0007283
"spermatogenesis" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0020037 "heme binding" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=ISO] [GO:0032183 "SUMO binding"
evidence=ISO] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
RGD:1307989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0020037
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
GO:GO:0042787 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204 InterPro:IPR006624
SMART:SM00706 IPI:IPI00476523 Ensembl:ENSRNOT00000019318
UCSC:RGD:1307989 ArrayExpress:F1M716 Uniprot:F1M716
Length = 3607
Score = 324 (119.1 bits), Expect = 3.3e-27, P = 3.3e-27
Identities = 106/374 (28%), Positives = 171/374 (45%)
Query: 38 GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
G L G+ + P+ L +++ VA G S AV VEG+ Y+ G G+LG G
Sbjct: 1782 GGLKGSKIKVPSFSETLSALNVVQVAGGSKSLF--AVTVEGKVYSCGEATNGRLGLGMSS 1839
Query: 97 QR-DRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
P ++ LS Y +KK +G H +T DG ++G G+LG S N +P
Sbjct: 1840 GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKP 1899
Query: 154 SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
+ L ++ + ACG+ + L+S + GL +YG+LGHG D++ +L
Sbjct: 1900 RLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHG--------DNTTQL 1949
Query: 213 AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
+P+ + L G +++VACG+ T+A+ +G V++WG G +G+LG +
Sbjct: 1950 ------KPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 2003
Query: 271 VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKPLM 326
+P+ ++ V I G+ S G ++ WGK +G D KP +
Sbjct: 2004 IPQNIERLNGQGVCQ----IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQV 2059
Query: 327 --DLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
L G + + G +H DS + +WG +G+ G G + P V LEG
Sbjct: 2060 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEG 2117
Query: 384 MHVISVACGYGHSL 397
+ VACG HS+
Sbjct: 2118 QKITRVACGSSHSV 2131
Score = 318 (117.0 bits), Expect = 1.4e-26, P = 1.4e-26
Identities = 87/272 (31%), Positives = 127/272 (46%)
Query: 34 GRRKGALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH 92
G R G VS PT L + V I+ VA HC+A+ EG Y+WG E G+LGH
Sbjct: 2788 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 2847
Query: 93 GDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE 152
G++ DRP ++ L ++ AG +H+ VT G+ +G ++G+LG ++++
Sbjct: 2848 GNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLK 2907
Query: 153 PSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVK 211
P V L V ACG+ L + ++ + G YG+LG G + K
Sbjct: 2908 PKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD-------GCK 2960
Query: 212 LAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV 271
+ P I +L G +VKV CG+ +VA+ G VYTWG G Y RLGH
Sbjct: 2961 V-------PMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR 3013
Query: 272 PRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
PR+V Q V+ A+ + CT G
Sbjct: 3014 PRQVQGLQGKKVI---AIATGSLHCVCCTEDG 3042
Score = 317 (116.6 bits), Expect = 1.8e-26, P = 1.8e-26
Identities = 97/331 (29%), Positives = 148/331 (44%)
Query: 77 GRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
G Y WG N RGQLG G K++ PT L+ + + G VT DG A
Sbjct: 2726 GTIYGWGHNHRGQLGGIEGAKVKV--PTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 2783
Query: 135 GWNKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
G+ G+LG G + P+ ++ + + A G + LSS EG + + G +
Sbjct: 2784 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAE 2841
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
G+LGHG + + RPR I +L G +V VA G H+ V + G +Y
Sbjct: 2842 DGKLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLY 2887
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG- 310
TWG G YGRLGH + +D+ P+ V+ Q + V+ + +G + C ++ WG
Sbjct: 2888 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI--DIACGSGDAQTLCLTDDDTVWSWGD 2945
Query: 311 ----KLKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGY 364
KL G D P + L+G + ++ G+ S + +WG Y LG+
Sbjct: 2946 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 3005
Query: 365 GPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
G P++V L+G VI++A G H
Sbjct: 3006 G--SDDHVRRPRQVQGLQGKKVIAIATGSLH 3034
Score = 288 (106.4 bits), Expect = 4.3e-23, P = 4.3e-23
Identities = 94/339 (27%), Positives = 151/339 (44%)
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
AV +G+ Y G G+LG G PT++ + IKK +G H + ++ +G
Sbjct: 2773 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 2832
Query: 130 NSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVS-EVTATACGADFTVWLSSVEGASILNA 187
++G + G+LG G+ R+ + P + L EV A G + +++ +
Sbjct: 2833 EVYSWGEAEDGKLGHGN-RSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAA--GDLYTW 2889
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGH DS E Q +P+ + AL G ++ +ACG+ T+ +
Sbjct: 2890 GKGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVIDIACGSGDAQTLCLT 2935
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG VP ++D V+ E GS S G
Sbjct: 2936 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC----GSQFSVALTKSGA 2991
Query: 306 LYMWGK-----LKNNGDDWMY-PKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQ 358
+Y WGK L + DD + P+ + L G + + +G++H D +WG
Sbjct: 2992 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 3051
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G V VACG H+L
Sbjct: 3052 EGQLGDGT--TNAIQRPRLVAALQGKKVNRVACGSAHTL 3088
Score = 281 (104.0 bits), Expect = 8.3e-30, Sum P(2) = 8.3e-30
Identities = 65/239 (27%), Positives = 113/239 (47%)
Query: 28 TCWDAVGRRKGA--LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRN 85
+C +A R G G + P ++ L ++ VA H A+ V+G+ ++WG
Sbjct: 1824 SCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 1883
Query: 86 ERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG 145
+ G+LGH ++ D+P ++ L +I+ G SH+ +T G +G ++G+LG G
Sbjct: 1884 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHG 1943
Query: 146 SIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
+++P V+ L+ V ACG+ L+ + + + G +G+LG G N
Sbjct: 1944 DNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 2003
Query: 205 TKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
P+ I L G+ + ++ CG ++A+ G V+TWG G Y RLGH
Sbjct: 2004 I--------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 2048
Score = 274 (101.5 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 94/346 (27%), Positives = 151/346 (43%)
Query: 75 VEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSL 132
+ + + WG N++ QLG G KI+ P+ LS + + G VT +G
Sbjct: 1766 IRTKVFVWGLNDKDQLGGLKGSKIKV--PSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 1823
Query: 133 AFGWNKHGQLGSGSIRNEIE-PSPVRCLVSEVT---ATACGADFTVWLSSVEGASILNAG 188
+ G +G+LG G + P + L S V A G L+ V+G + + G
Sbjct: 1824 SCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-VDG-KVFSWG 1881
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
G+LGH ++ + +PR I AL + I +ACG++H+ A+ S G
Sbjct: 1882 EGDDGKLGH-----FSRMNCD---------KPRLIEALKTKRIRDIACGSSHSAALTSSG 1927
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQL 306
+YTWG G YGRLGH + + P+ V V + V+ ++ GS ++ A G +
Sbjct: 1928 ELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VACGSRDAQTLALTDEGLV 1983
Query: 307 YMWG-----KLKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQY 359
+ WG KL G + P+ + L+G + ++ G S + +WG Y
Sbjct: 1984 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 2043
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G P+ V+ L G ++ VA G H L + D V
Sbjct: 2044 FRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQV 2087
Score = 261 (96.9 bits), Expect = 6.2e-19, P = 6.2e-19
Identities = 78/262 (29%), Positives = 116/262 (44%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L G+++ VAAG H V G YTWG+ G+LGH D + +P +V
Sbjct: 2856 PRVIESLRGIEVVDVAAG--GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA 2913
Query: 107 LSKYKIKK--AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EV 163
L +++ G+G + T+ +T+D ++G +G+LG G P + L V
Sbjct: 2914 LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGV 2973
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
CG+ F+V L+ GA + G Y +LGHG+D+ RPR +
Sbjct: 2974 VKVECGSQFSVALTK-SGA-VYTWGKGDYHRLGHGSDDHVR--------------RPRQV 3017
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR--- 280
L G+ ++ +A G+ H V G VYTWG G+LG PR V Q
Sbjct: 3018 QGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKV 3077
Query: 281 NNVLPPEAVISAGSVNSSCTAG 302
N V A A S + +AG
Sbjct: 3078 NRVACGSAHTLAWSTSKPASAG 3099
Score = 242 (90.2 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 79/285 (27%), Positives = 125/285 (43%)
Query: 129 GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
G+ +GW N GQLG P+P L + G + T++ + +G +
Sbjct: 2724 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG-KLYA 2782
Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
G G+LG G +T P + ++ I KVA G H +A+
Sbjct: 2783 TGYGAGGRLGIGGTESVST--------------PTLLESIQHVFIKKVAVNSGGKHCLAL 2828
Query: 245 DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
S+G VY+WG G+LGH + PR ++ + V+ ++AG +S+C G
Sbjct: 2829 SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD----VAAGGAHSACVTAAG 2884
Query: 305 QLYMWGKLK------NNGDDWMYPKPLMDLSGW---NLRCMDSGNMHHFVGADSSCI-SW 354
LY WGK + ++ +D + PK + L G ++ C SG+ D + SW
Sbjct: 2885 DLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIAC-GSGDAQTLCLTDDDTVWSW 2943
Query: 355 GHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G YG+LG G G +P K+D L G+ V+ V CG S+ +
Sbjct: 2944 GDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 2986
Score = 186 (70.5 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 58/164 (35%), Positives = 77/164 (46%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + V C S VA+ G YTWG+ + +LGHG
Sbjct: 2953 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 3009
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSP 155
RP V L K+ G H V TEDG +G N GQLG G+ N I+ P
Sbjct: 3010 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTT-NAIQRPRL 3068
Query: 156 VRCLVSE-VTATACGADFTV-WLSSVEG-ASILNAGLP-QYGQL 195
V L + V ACG+ T+ W +S A L A +P +Y L
Sbjct: 3069 VAALQGKKVNRVACGSAHTLAWSTSKPASAGKLPAQVPMEYNHL 3112
Score = 169 (64.5 bits), Expect = 7.7e-16, Sum P(2) = 7.7e-16
Identities = 38/120 (31%), Positives = 64/120 (53%)
Query: 65 CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVV 124
C + +A+ G +TWG+ + +LGHG + +P +V L KI G H +
Sbjct: 2021 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 2080
Query: 125 VTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGAS 183
VT+ G A+G N HGQ G+G+ +P+ V+ L + +T ACG+ +V ++V+ A+
Sbjct: 2081 VTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVAT 2140
Score = 146 (56.5 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 51/200 (25%), Positives = 89/200 (44%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
+ P ++ L+G + VA G +A+ EG ++WG + G+LG G + P +
Sbjct: 1949 LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNI 2008
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L+ + + G ++ +T+ G +G + +LG GS + +P V L + +
Sbjct: 2009 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI 2068
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
A GA L+ + + G +GQ G+GT N K P +
Sbjct: 2069 VHVAVGALHC--LAVTDSGQVYAWGDNDHGQQGNGTTT-VNRK-------------PTLV 2112
Query: 224 AALAGETIVKVACGTNHTVA 243
L G+ I +VACG++H+VA
Sbjct: 2113 QGLEGQKITRVACGSSHSVA 2132
Score = 122 (48.0 bits), Expect = 8.3e-30, Sum P(2) = 8.3e-30
Identities = 43/168 (25%), Positives = 74/168 (44%)
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
T++ G +Y WG G+LG E VP + L P +I + T
Sbjct: 2719 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA---TLRPVQLIGGEQTLFAVT 2775
Query: 301 AGGGQLYMWG-----KLKNNGDDWMYPKPLMD-LSGWNLR--CMDSGNMHHF-VGADSSC 351
A G +LY G +L G + + L++ + ++ ++SG H + ++
Sbjct: 2776 ADG-KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 2834
Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
SWG A+ G+LG+G + P+ ++ L G+ V+ VA G HS +
Sbjct: 2835 YSWGEAEDGKLGHG--NRSPCDRPRVIESLRGIEVVDVAAGGAHSACV 2880
>UNIPROTKB|F1M560 [details] [associations]
symbol:Herc2 "Protein Herc2" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
RGD:1307989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0046872
GO:GO:0008270 GO:GO:0020037 GO:GO:0005622 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.10.120.10
SUPFAM:SSF55856 InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
Pfam:PF03256 PROSITE:PS51284 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204 InterPro:IPR006624
SMART:SM00706 IPI:IPI00779702 Ensembl:ENSRNOT00000055965
ArrayExpress:F1M560 Uniprot:F1M560
Length = 3643
Score = 324 (119.1 bits), Expect = 3.3e-27, P = 3.3e-27
Identities = 106/374 (28%), Positives = 171/374 (45%)
Query: 38 GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
G L G+ + P+ L +++ VA G S AV VEG+ Y+ G G+LG G
Sbjct: 1782 GGLKGSKIKVPSFSETLSALNVVQVAGGSKSLF--AVTVEGKVYSCGEATNGRLGLGMSS 1839
Query: 97 QR-DRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
P ++ LS Y +KK +G H +T DG ++G G+LG S N +P
Sbjct: 1840 GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKP 1899
Query: 154 SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
+ L ++ + ACG+ + L+S + GL +YG+LGHG D++ +L
Sbjct: 1900 RLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHG--------DNTTQL 1949
Query: 213 AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
+P+ + L G +++VACG+ T+A+ +G V++WG G +G+LG +
Sbjct: 1950 ------KPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 2003
Query: 271 VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKPLM 326
+P+ ++ V I G+ S G ++ WGK +G D KP +
Sbjct: 2004 IPQNIERLNGQGVCQ----IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQV 2059
Query: 327 --DLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
L G + + G +H DS + +WG +G+ G G + P V LEG
Sbjct: 2060 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEG 2117
Query: 384 MHVISVACGYGHSL 397
+ VACG HS+
Sbjct: 2118 QKITRVACGSSHSV 2131
Score = 318 (117.0 bits), Expect = 1.4e-26, P = 1.4e-26
Identities = 87/272 (31%), Positives = 127/272 (46%)
Query: 34 GRRKGALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH 92
G R G VS PT L + V I+ VA HC+A+ EG Y+WG E G+LGH
Sbjct: 2824 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 2883
Query: 93 GDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE 152
G++ DRP ++ L ++ AG +H+ VT G+ +G ++G+LG ++++
Sbjct: 2884 GNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLK 2943
Query: 153 PSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVK 211
P V L V ACG+ L + ++ + G YG+LG G + K
Sbjct: 2944 PKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD-------GCK 2996
Query: 212 LAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV 271
+ P I +L G +VKV CG+ +VA+ G VYTWG G Y RLGH
Sbjct: 2997 V-------PMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR 3049
Query: 272 PRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
PR+V Q V+ A+ + CT G
Sbjct: 3050 PRQVQGLQGKKVI---AIATGSLHCVCCTEDG 3078
Score = 317 (116.6 bits), Expect = 1.8e-26, P = 1.8e-26
Identities = 97/331 (29%), Positives = 148/331 (44%)
Query: 77 GRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
G Y WG N RGQLG G K++ PT L+ + + G VT DG A
Sbjct: 2762 GTIYGWGHNHRGQLGGIEGAKVKV--PTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 2819
Query: 135 GWNKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
G+ G+LG G + P+ ++ + + A G + LSS EG + + G +
Sbjct: 2820 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAE 2877
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
G+LGHG + + RPR I +L G +V VA G H+ V + G +Y
Sbjct: 2878 DGKLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLY 2923
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG- 310
TWG G YGRLGH + +D+ P+ V+ Q + V+ + +G + C ++ WG
Sbjct: 2924 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI--DIACGSGDAQTLCLTDDDTVWSWGD 2981
Query: 311 ----KLKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGY 364
KL G D P + L+G + ++ G+ S + +WG Y LG+
Sbjct: 2982 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 3041
Query: 365 GPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
G P++V L+G VI++A G H
Sbjct: 3042 G--SDDHVRRPRQVQGLQGKKVIAIATGSLH 3070
Score = 288 (106.4 bits), Expect = 4.4e-23, P = 4.4e-23
Identities = 94/339 (27%), Positives = 151/339 (44%)
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
AV +G+ Y G G+LG G PT++ + IKK +G H + ++ +G
Sbjct: 2809 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 2868
Query: 130 NSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVS-EVTATACGADFTVWLSSVEGASILNA 187
++G + G+LG G+ R+ + P + L EV A G + +++ +
Sbjct: 2869 EVYSWGEAEDGKLGHGN-RSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAA--GDLYTW 2925
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGH DS E Q +P+ + AL G ++ +ACG+ T+ +
Sbjct: 2926 GKGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVIDIACGSGDAQTLCLT 2971
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG VP ++D V+ E GS S G
Sbjct: 2972 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC----GSQFSVALTKSGA 3027
Query: 306 LYMWGK-----LKNNGDDWMY-PKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQ 358
+Y WGK L + DD + P+ + L G + + +G++H D +WG
Sbjct: 3028 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 3087
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G V VACG H+L
Sbjct: 3088 EGQLGDGT--TNAIQRPRLVAALQGKKVNRVACGSAHTL 3124
Score = 281 (104.0 bits), Expect = 8.5e-30, Sum P(2) = 8.5e-30
Identities = 65/239 (27%), Positives = 113/239 (47%)
Query: 28 TCWDAVGRRKGA--LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRN 85
+C +A R G G + P ++ L ++ VA H A+ V+G+ ++WG
Sbjct: 1824 SCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 1883
Query: 86 ERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG 145
+ G+LGH ++ D+P ++ L +I+ G SH+ +T G +G ++G+LG G
Sbjct: 1884 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHG 1943
Query: 146 SIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
+++P V+ L+ V ACG+ L+ + + + G +G+LG G N
Sbjct: 1944 DNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 2003
Query: 205 TKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
P+ I L G+ + ++ CG ++A+ G V+TWG G Y RLGH
Sbjct: 2004 I--------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 2048
Score = 274 (101.5 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 94/346 (27%), Positives = 151/346 (43%)
Query: 75 VEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSL 132
+ + + WG N++ QLG G KI+ P+ LS + + G VT +G
Sbjct: 1766 IRTKVFVWGLNDKDQLGGLKGSKIKV--PSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 1823
Query: 133 AFGWNKHGQLGSGSIRNEIE-PSPVRCLVSEVT---ATACGADFTVWLSSVEGASILNAG 188
+ G +G+LG G + P + L S V A G L+ V+G + + G
Sbjct: 1824 SCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-VDG-KVFSWG 1881
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
G+LGH ++ + +PR I AL + I +ACG++H+ A+ S G
Sbjct: 1882 EGDDGKLGH-----FSRMNCD---------KPRLIEALKTKRIRDIACGSSHSAALTSSG 1927
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQL 306
+YTWG G YGRLGH + + P+ V V + V+ ++ GS ++ A G +
Sbjct: 1928 ELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VACGSRDAQTLALTDEGLV 1983
Query: 307 YMWG-----KLKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQY 359
+ WG KL G + P+ + L+G + ++ G S + +WG Y
Sbjct: 1984 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 2043
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G P+ V+ L G ++ VA G H L + D V
Sbjct: 2044 FRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQV 2087
Score = 261 (96.9 bits), Expect = 6.2e-19, P = 6.2e-19
Identities = 78/262 (29%), Positives = 116/262 (44%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L G+++ VAAG H V G YTWG+ G+LGH D + +P +V
Sbjct: 2892 PRVIESLRGIEVVDVAAG--GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA 2949
Query: 107 LSKYKIKK--AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EV 163
L +++ G+G + T+ +T+D ++G +G+LG G P + L V
Sbjct: 2950 LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGV 3009
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
CG+ F+V L+ GA + G Y +LGHG+D+ RPR +
Sbjct: 3010 VKVECGSQFSVALTK-SGA-VYTWGKGDYHRLGHGSDDHVR--------------RPRQV 3053
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR--- 280
L G+ ++ +A G+ H V G VYTWG G+LG PR V Q
Sbjct: 3054 QGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKV 3113
Query: 281 NNVLPPEAVISAGSVNSSCTAG 302
N V A A S + +AG
Sbjct: 3114 NRVACGSAHTLAWSTSKPASAG 3135
Score = 242 (90.2 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 79/285 (27%), Positives = 125/285 (43%)
Query: 129 GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
G+ +GW N GQLG P+P L + G + T++ + +G +
Sbjct: 2760 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG-KLYA 2818
Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
G G+LG G +T P + ++ I KVA G H +A+
Sbjct: 2819 TGYGAGGRLGIGGTESVST--------------PTLLESIQHVFIKKVAVNSGGKHCLAL 2864
Query: 245 DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
S+G VY+WG G+LGH + PR ++ + V+ ++AG +S+C G
Sbjct: 2865 SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD----VAAGGAHSACVTAAG 2920
Query: 305 QLYMWGKLK------NNGDDWMYPKPLMDLSGW---NLRCMDSGNMHHFVGADSSCI-SW 354
LY WGK + ++ +D + PK + L G ++ C SG+ D + SW
Sbjct: 2921 DLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIAC-GSGDAQTLCLTDDDTVWSW 2979
Query: 355 GHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G YG+LG G G +P K+D L G+ V+ V CG S+ +
Sbjct: 2980 GDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 3022
Score = 186 (70.5 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 58/164 (35%), Positives = 77/164 (46%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + V C S VA+ G YTWG+ + +LGHG
Sbjct: 2989 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 3045
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSP 155
RP V L K+ G H V TEDG +G N GQLG G+ N I+ P
Sbjct: 3046 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTT-NAIQRPRL 3104
Query: 156 VRCLVSE-VTATACGADFTV-WLSSVEG-ASILNAGLP-QYGQL 195
V L + V ACG+ T+ W +S A L A +P +Y L
Sbjct: 3105 VAALQGKKVNRVACGSAHTLAWSTSKPASAGKLPAQVPMEYNHL 3148
Score = 169 (64.5 bits), Expect = 7.8e-16, Sum P(2) = 7.8e-16
Identities = 38/120 (31%), Positives = 64/120 (53%)
Query: 65 CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVV 124
C + +A+ G +TWG+ + +LGHG + +P +V L KI G H +
Sbjct: 2021 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 2080
Query: 125 VTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGAS 183
VT+ G A+G N HGQ G+G+ +P+ V+ L + +T ACG+ +V ++V+ A+
Sbjct: 2081 VTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVAT 2140
Score = 146 (56.5 bits), Expect = 2.8e-13, Sum P(2) = 2.8e-13
Identities = 51/200 (25%), Positives = 89/200 (44%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
+ P ++ L+G + VA G +A+ EG ++WG + G+LG G + P +
Sbjct: 1949 LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNI 2008
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L+ + + G ++ +T+ G +G + +LG GS + +P V L + +
Sbjct: 2009 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI 2068
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
A GA L+ + + G +GQ G+GT N K P +
Sbjct: 2069 VHVAVGALHC--LAVTDSGQVYAWGDNDHGQQGNGTTT-VNRK-------------PTLV 2112
Query: 224 AALAGETIVKVACGTNHTVA 243
L G+ I +VACG++H+VA
Sbjct: 2113 QGLEGQKITRVACGSSHSVA 2132
Score = 122 (48.0 bits), Expect = 8.5e-30, Sum P(2) = 8.5e-30
Identities = 43/168 (25%), Positives = 74/168 (44%)
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
T++ G +Y WG G+LG E VP + L P +I + T
Sbjct: 2755 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA---TLRPVQLIGGEQTLFAVT 2811
Query: 301 AGGGQLYMWG-----KLKNNGDDWMYPKPLMD-LSGWNLR--CMDSGNMHHF-VGADSSC 351
A G +LY G +L G + + L++ + ++ ++SG H + ++
Sbjct: 2812 ADG-KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 2870
Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
SWG A+ G+LG+G + P+ ++ L G+ V+ VA G HS +
Sbjct: 2871 YSWGEAEDGKLGHG--NRSPCDRPRVIESLRGIEVVDVAAGGAHSACV 2916
>UNIPROTKB|D4ACN3 [details] [associations]
symbol:Herc2 "Protein Herc2" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
RGD:1307989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005743 GO:GO:0046872 GO:GO:0008270 GO:GO:0006281
GO:GO:0007283 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 OrthoDB:EOG41C6V9 InterPro:IPR006624
SMART:SM00706 IPI:IPI00764717 Ensembl:ENSRNOT00000019245
ArrayExpress:D4ACN3 Uniprot:D4ACN3
Length = 4779
Score = 324 (119.1 bits), Expect = 4.5e-27, P = 4.5e-27
Identities = 106/374 (28%), Positives = 171/374 (45%)
Query: 38 GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
G L G+ + P+ L +++ VA G S AV VEG+ Y+ G G+LG G
Sbjct: 2917 GGLKGSKIKVPSFSETLSALNVVQVAGGSKSLF--AVTVEGKVYSCGEATNGRLGLGMSS 2974
Query: 97 QR-DRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
P ++ LS Y +KK +G H +T DG ++G G+LG S N +P
Sbjct: 2975 GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKP 3034
Query: 154 SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
+ L ++ + ACG+ + L+S + GL +YG+LGHG D++ +L
Sbjct: 3035 RLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHG--------DNTTQL 3084
Query: 213 AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
+P+ + L G +++VACG+ T+A+ +G V++WG G +G+LG +
Sbjct: 3085 ------KPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 3138
Query: 271 VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKPLM 326
+P+ ++ V I G+ S G ++ WGK +G D KP +
Sbjct: 3139 IPQNIERLNGQGVCQ----IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQV 3194
Query: 327 --DLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
L G + + G +H DS + +WG +G+ G G + P V LEG
Sbjct: 3195 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEG 3252
Query: 384 MHVISVACGYGHSL 397
+ VACG HS+
Sbjct: 3253 QKITRVACGSSHSV 3266
Score = 318 (117.0 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 87/272 (31%), Positives = 127/272 (46%)
Query: 34 GRRKGALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH 92
G R G VS PT L + V I+ VA HC+A+ EG Y+WG E G+LGH
Sbjct: 3959 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 4018
Query: 93 GDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE 152
G++ DRP ++ L ++ AG +H+ VT G+ +G ++G+LG ++++
Sbjct: 4019 GNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLK 4078
Query: 153 PSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVK 211
P V L V ACG+ L + ++ + G YG+LG G + K
Sbjct: 4079 PKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD-------GCK 4131
Query: 212 LAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV 271
+ P I +L G +VKV CG+ +VA+ G VYTWG G Y RLGH
Sbjct: 4132 V-------PMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR 4184
Query: 272 PRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
PR+V Q V+ A+ + CT G
Sbjct: 4185 PRQVQGLQGKKVI---AIATGSLHCVCCTEDG 4213
Score = 317 (116.6 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 97/331 (29%), Positives = 148/331 (44%)
Query: 77 GRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
G Y WG N RGQLG G K++ PT L+ + + G VT DG A
Sbjct: 3897 GTIYGWGHNHRGQLGGIEGAKVKV--PTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 3954
Query: 135 GWNKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
G+ G+LG G + P+ ++ + + A G + LSS EG + + G +
Sbjct: 3955 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAE 4012
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
G+LGHG + + RPR I +L G +V VA G H+ V + G +Y
Sbjct: 4013 DGKLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLY 4058
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG- 310
TWG G YGRLGH + +D+ P+ V+ Q + V+ + +G + C ++ WG
Sbjct: 4059 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI--DIACGSGDAQTLCLTDDDTVWSWGD 4116
Query: 311 ----KLKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGY 364
KL G D P + L+G + ++ G+ S + +WG Y LG+
Sbjct: 4117 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4176
Query: 365 GPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
G P++V L+G VI++A G H
Sbjct: 4177 G--SDDHVRRPRQVQGLQGKKVIAIATGSLH 4205
Score = 288 (106.4 bits), Expect = 5.9e-23, P = 5.9e-23
Identities = 94/339 (27%), Positives = 151/339 (44%)
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
AV +G+ Y G G+LG G PT++ + IKK +G H + ++ +G
Sbjct: 3944 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4003
Query: 130 NSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVS-EVTATACGADFTVWLSSVEGASILNA 187
++G + G+LG G+ R+ + P + L EV A G + +++ +
Sbjct: 4004 EVYSWGEAEDGKLGHGN-RSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAA--GDLYTW 4060
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGH DS E Q +P+ + AL G ++ +ACG+ T+ +
Sbjct: 4061 GKGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVIDIACGSGDAQTLCLT 4106
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG VP ++D V+ E GS S G
Sbjct: 4107 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC----GSQFSVALTKSGA 4162
Query: 306 LYMWGK-----LKNNGDDWMY-PKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQ 358
+Y WGK L + DD + P+ + L G + + +G++H D +WG
Sbjct: 4163 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4222
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G V VACG H+L
Sbjct: 4223 EGQLGDGT--TNAIQRPRLVAALQGKKVNRVACGSAHTL 4259
Score = 281 (104.0 bits), Expect = 1.5e-29, Sum P(2) = 1.5e-29
Identities = 65/239 (27%), Positives = 113/239 (47%)
Query: 28 TCWDAVGRRKGA--LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRN 85
+C +A R G G + P ++ L ++ VA H A+ V+G+ ++WG
Sbjct: 2959 SCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3018
Query: 86 ERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG 145
+ G+LGH ++ D+P ++ L +I+ G SH+ +T G +G ++G+LG G
Sbjct: 3019 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHG 3078
Query: 146 SIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
+++P V+ L+ V ACG+ L+ + + + G +G+LG G N
Sbjct: 3079 DNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 3138
Query: 205 TKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
P+ I L G+ + ++ CG ++A+ G V+TWG G Y RLGH
Sbjct: 3139 I--------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3183
Score = 281 (104.0 bits), Expect = 2.0e-21, P = 2.0e-21
Identities = 74/277 (26%), Positives = 129/277 (46%)
Query: 39 ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
A + ++++P ++ L +I +AA H +A+ G Y+WG + G+LGHGD +
Sbjct: 422 AYNSDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 481
Query: 99 DRPTIVSELSKYKIKK----AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
+ P ++S S + K G +++ +T +G +G +G+LG GS +E P
Sbjct: 482 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 541
Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
V L +V ACG+ L+ E + + G YG+LG G + T
Sbjct: 542 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 593
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P+ I L ++KV CG+ ++A+ G VY+WG G RLGH ++ P+
Sbjct: 594 ------PKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 647
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
++ Q V+ ++AGS + +++ WG
Sbjct: 648 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 680
Score = 274 (101.5 bits), Expect = 1.9e-20, P = 1.9e-20
Identities = 94/346 (27%), Positives = 151/346 (43%)
Query: 75 VEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSL 132
+ + + WG N++ QLG G KI+ P+ LS + + G VT +G
Sbjct: 2901 IRTKVFVWGLNDKDQLGGLKGSKIKV--PSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 2958
Query: 133 AFGWNKHGQLGSGSIRNEIE-PSPVRCLVSEVT---ATACGADFTVWLSSVEGASILNAG 188
+ G +G+LG G + P + L S V A G L+ V+G + + G
Sbjct: 2959 SCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-VDG-KVFSWG 3016
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
G+LGH ++ + +PR I AL + I +ACG++H+ A+ S G
Sbjct: 3017 EGDDGKLGH-----FSRMNCD---------KPRLIEALKTKRIRDIACGSSHSAALTSSG 3062
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQL 306
+YTWG G YGRLGH + + P+ V V + V+ ++ GS ++ A G +
Sbjct: 3063 ELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VACGSRDAQTLALTDEGLV 3118
Query: 307 YMWG-----KLKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQY 359
+ WG KL G + P+ + L+G + ++ G S + +WG Y
Sbjct: 3119 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3178
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G P+ V+ L G ++ VA G H L + D V
Sbjct: 3179 FRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQV 3222
Score = 261 (96.9 bits), Expect = 8.4e-19, P = 8.4e-19
Identities = 78/262 (29%), Positives = 116/262 (44%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L G+++ VAAG H V G YTWG+ G+LGH D + +P +V
Sbjct: 4027 PRVIESLRGIEVVDVAAG--GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA 4084
Query: 107 LSKYKIKK--AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EV 163
L +++ G+G + T+ +T+D ++G +G+LG G P + L V
Sbjct: 4085 LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGV 4144
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
CG+ F+V L+ GA + G Y +LGHG+D+ RPR +
Sbjct: 4145 VKVECGSQFSVALTK-SGA-VYTWGKGDYHRLGHGSDDHVR--------------RPRQV 4188
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR--- 280
L G+ ++ +A G+ H V G VYTWG G+LG PR V Q
Sbjct: 4189 QGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKV 4248
Query: 281 NNVLPPEAVISAGSVNSSCTAG 302
N V A A S + +AG
Sbjct: 4249 NRVACGSAHTLAWSTSKPASAG 4270
Score = 243 (90.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 75/280 (26%), Positives = 130/280 (46%)
Query: 137 NKHGQLGSGSIRNE-IEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
+++G++ + + ++ + P V+ L S + A +D +L+ + + G G+
Sbjct: 413 SRNGRVYTQAYNSDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGR 472
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LGHG + ++ V A+ + AG+ +V +ACG+ ++ A+ ++G +YTWG
Sbjct: 473 LGHG--DTVPLEEPKVISAFSGKQ--------AGKHVVHIACGSTYSAAITAEGELYTWG 522
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG---- 310
G YGRLGH +DE +P V + V+ + +G + GQ++ WG
Sbjct: 523 RGNYGRLGHGSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWSWGDGDY 580
Query: 311 -KLKNNGDDWMY-PK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYG 365
KL G D PK L DL +RC ++ + D SWG LG+G
Sbjct: 581 GKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIA--LTKDGQVYSWGKGDNQRLGHG 638
Query: 366 PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
++ PK ++ L+G VI VA G H L + + + V
Sbjct: 639 T--EEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 676
Score = 242 (90.2 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 79/285 (27%), Positives = 125/285 (43%)
Query: 129 GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
G+ +GW N GQLG P+P L + G + T++ + +G +
Sbjct: 3895 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG-KLYA 3953
Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
G G+LG G +T P + ++ I KVA G H +A+
Sbjct: 3954 TGYGAGGRLGIGGTESVST--------------PTLLESIQHVFIKKVAVNSGGKHCLAL 3999
Query: 245 DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
S+G VY+WG G+LGH + PR ++ + V+ ++AG +S+C G
Sbjct: 4000 SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD----VAAGGAHSACVTAAG 4055
Query: 305 QLYMWGKLK------NNGDDWMYPKPLMDLSGW---NLRCMDSGNMHHFVGADSSCI-SW 354
LY WGK + ++ +D + PK + L G ++ C SG+ D + SW
Sbjct: 4056 DLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIAC-GSGDAQTLCLTDDDTVWSW 4114
Query: 355 GHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G YG+LG G G +P K+D L G+ V+ V CG S+ +
Sbjct: 4115 GDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4157
Score = 229 (85.7 bits), Expect = 4.4e-15, P = 4.4e-15
Identities = 83/312 (26%), Positives = 136/312 (43%)
Query: 101 PTIVSELSKYKIKKAGAGRS--HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
P +V L+ I K A H + + G ++G G+LG G EP +
Sbjct: 430 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 489
Query: 159 LVSE-----VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
+ V ACG+ ++ +++ EG + G YG+LGHG+ ++D ++
Sbjct: 490 FSGKQAGKHVVHIACGSTYSAAITA-EG-ELYTWGRGNYGRLGHGS-----SEDEAI--- 539
Query: 214 YEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV 271
P +A L G ++ VACG+ T+AV G V++WG G YG+LG
Sbjct: 540 ------PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT 593
Query: 272 PRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN----NGDDW--MYPKPL 325
P+ ++ Q +V+ + GS S GQ+Y WGK N +G + YPK L
Sbjct: 594 PKLIEKLQDLDVIK----VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLL 649
Query: 326 MDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGM 384
L G + + +G+ H + DS SWG + + + + P + L+
Sbjct: 650 EGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHFDTLRVTKPEPTALPGLDTK 707
Query: 385 HVISVACGYGHS 396
H++ +ACG S
Sbjct: 708 HIVGIACGPAQS 719
Score = 186 (70.5 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 58/164 (35%), Positives = 77/164 (46%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + V C S VA+ G YTWG+ + +LGHG
Sbjct: 4124 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4180
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSP 155
RP V L K+ G H V TEDG +G N GQLG G+ N I+ P
Sbjct: 4181 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTT-NAIQRPRL 4239
Query: 156 VRCLVSE-VTATACGADFTV-WLSSVEG-ASILNAGLP-QYGQL 195
V L + V ACG+ T+ W +S A L A +P +Y L
Sbjct: 4240 VAALQGKKVNRVACGSAHTLAWSTSKPASAGKLPAQVPMEYNHL 4283
Score = 169 (64.5 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 38/120 (31%), Positives = 64/120 (53%)
Query: 65 CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVV 124
C + +A+ G +TWG+ + +LGHG + +P +V L KI G H +
Sbjct: 3156 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3215
Query: 125 VTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGAS 183
VT+ G A+G N HGQ G+G+ +P+ V+ L + +T ACG+ +V ++V+ A+
Sbjct: 3216 VTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVAT 3275
Score = 146 (56.5 bits), Expect = 4.8e-13, Sum P(2) = 4.8e-13
Identities = 51/200 (25%), Positives = 89/200 (44%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
+ P ++ L+G + VA G +A+ EG ++WG + G+LG G + P +
Sbjct: 3084 LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNI 3143
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L+ + + G ++ +T+ G +G + +LG GS + +P V L + +
Sbjct: 3144 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI 3203
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
A GA L+ + + G +GQ G+GT N K P +
Sbjct: 3204 VHVAVGALHC--LAVTDSGQVYAWGDNDHGQQGNGTTT-VNRK-------------PTLV 3247
Query: 224 AALAGETIVKVACGTNHTVA 243
L G+ I +VACG++H+VA
Sbjct: 3248 QGLEGQKITRVACGSSHSVA 3267
Score = 138 (53.6 bits), Expect = 3.6e-12, Sum P(2) = 3.6e-12
Identities = 40/147 (27%), Positives = 69/147 (46%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG +P + L +D+ + C S +A+ +G+ Y+WG+ + +LGHG +
Sbjct: 585 RGGSDG-CKTPKLIEKLQDLDV--IKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEE 641
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIR-NEIEPSP 155
P ++ L K+ AG +H + +TED ++G N Q ++R + EP+
Sbjct: 642 HVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-HFDTLRVTKPEPTA 700
Query: 156 VRCL-VSEVTATACG-ADFTVWLSSVE 180
+ L + ACG A W S E
Sbjct: 701 LPGLDTKHIVGIACGPAQSFAWSSCSE 727
Score = 130 (50.8 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 49/201 (24%), Positives = 89/201 (44%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L G+ + VA G +AV G+ ++WG + G+LG G P ++ +
Sbjct: 540 PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK 599
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTA 165
L + K G ++ +T+DG ++G + +LG G+ + P + L + V
Sbjct: 600 LQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID 659
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
A G+ T L+ E + + + G Q H ++T +++ +P P A+
Sbjct: 660 VAAGS--THCLALTEDSEVHSWG--SNDQCQH-----FDT----LRVT---KPEPTALPG 703
Query: 226 LAGETIVKVACGTNHTVAVDS 246
L + IV +ACG + A S
Sbjct: 704 LDTKHIVGIACGPAQSFAWSS 724
Score = 122 (48.0 bits), Expect = 1.5e-29, Sum P(2) = 1.5e-29
Identities = 43/168 (25%), Positives = 74/168 (44%)
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
T++ G +Y WG G+LG E VP + L P +I + T
Sbjct: 3890 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA---TLRPVQLIGGEQTLFAVT 3946
Query: 301 AGGGQLYMWG-----KLKNNGDDWMYPKPLMD-LSGWNLR--CMDSGNMHHF-VGADSSC 351
A G +LY G +L G + + L++ + ++ ++SG H + ++
Sbjct: 3947 ADG-KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4005
Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
SWG A+ G+LG+G + P+ ++ L G+ V+ VA G HS +
Sbjct: 4006 YSWGEAEDGKLGHG--NRSPCDRPRVIESLRGIEVVDVAAGGAHSACV 4051
>MGI|MGI:103234 [details] [associations]
symbol:Herc2 "hect (homologous to the E6-AP (UBE3A) carboxyl
terminus) domain and RCC1 (CHC1)-like domain (RLD) 2" species:10090
"Mus musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;IBA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;IBA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005743 "mitochondrial inner membrane"
evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0006281
"DNA repair" evidence=ISO] [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=ISO] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016874
"ligase activity" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=ISO] [GO:0032183 "SUMO binding" evidence=ISO] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=IBA] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS00191 PROSITE:PS01357 PROSITE:PS50082
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS50294
PROSITE:PS51416 SMART:SM00119 SMART:SM00291 UniPathway:UPA00143
MGI:MGI:103234 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005814 PROSITE:PS00678 GO:GO:0005743 GO:GO:0046872
GO:GO:0008270 GO:GO:0006281 GO:GO:0007283 GO:GO:0020037
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 GO:GO:0042787 GO:GO:0032183 Gene3D:2.30.30.30
InterPro:IPR021097 InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
eggNOG:COG5021 GeneTree:ENSGT00700000104208 CTD:8924 KO:K10595
OMA:QLAFTRD HOVERGEN:HBG081598 OrthoDB:EOG41C6V9 InterPro:IPR006624
SMART:SM00706 EMBL:AF061529 EMBL:AF071173 EMBL:AC102121
EMBL:AC102150 EMBL:AK141515 EMBL:AK148361 EMBL:AK161826
EMBL:AK162270 EMBL:AK162708 EMBL:AK220338 EMBL:BC044667
EMBL:BC054829 IPI:IPI00309574 IPI:IPI00314989 RefSeq:NP_034548.2
UniGene:Mm.20929 ProteinModelPortal:Q4U2R1 SMR:Q4U2R1 STRING:Q4U2R1
PhosphoSite:Q4U2R1 PaxDb:Q4U2R1 PRIDE:Q4U2R1
Ensembl:ENSMUST00000076226 Ensembl:ENSMUST00000164095 GeneID:15204
KEGG:mmu:15204 UCSC:uc009hdv.1 InParanoid:Q4U2R1 ChiTaRS:HERC2
NextBio:287753 Bgee:Q4U2R1 Genevestigator:Q4U2R1
GermOnline:ENSMUSG00000030451 Uniprot:Q4U2R1
Length = 4836
Score = 324 (119.1 bits), Expect = 4.5e-27, P = 4.5e-27
Identities = 106/374 (28%), Positives = 171/374 (45%)
Query: 38 GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
G L G+ + P+ L +++ VA G S AV VEG+ Y+ G G+LG G
Sbjct: 2974 GGLKGSKIKVPSFSETLSALNVVQVAGGSKSLF--AVTVEGKVYSCGEATNGRLGLGMSS 3031
Query: 97 QR-DRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
P ++ LS Y +KK +G H +T DG ++G G+LG S N +P
Sbjct: 3032 GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKP 3091
Query: 154 SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
+ L ++ + ACG+ + L+S + GL +YG+LGHG D++ +L
Sbjct: 3092 RLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHG--------DNTTQL 3141
Query: 213 AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
+P+ + L G +++VACG+ T+A+ +G V++WG G +G+LG +
Sbjct: 3142 ------KPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 3195
Query: 271 VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKPLM 326
+P+ ++ V I G+ S G ++ WGK +G D KP +
Sbjct: 3196 IPQNIERLNGQGVCQ----IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQV 3251
Query: 327 --DLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
L G + + G +H DS + +WG +G+ G G + P V LEG
Sbjct: 3252 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEG 3309
Query: 384 MHVISVACGYGHSL 397
+ VACG HS+
Sbjct: 3310 QKITRVACGSSHSV 3323
Score = 318 (117.0 bits), Expect = 2.0e-26, P = 2.0e-26
Identities = 87/272 (31%), Positives = 127/272 (46%)
Query: 34 GRRKGALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH 92
G R G VS PT L + V I+ VA HC+A+ EG Y+WG E G+LGH
Sbjct: 4016 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 4075
Query: 93 GDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE 152
G++ DRP ++ L ++ AG +H+ VT G+ +G ++G+LG ++++
Sbjct: 4076 GNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLK 4135
Query: 153 PSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVK 211
P V L V ACG+ L + ++ + G YG+LG G + K
Sbjct: 4136 PKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD-------GCK 4188
Query: 212 LAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV 271
+ P I +L G +VKV CG+ +VA+ G VYTWG G Y RLGH
Sbjct: 4189 V-------PMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR 4241
Query: 272 PRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
PR+V Q V+ A+ + CT G
Sbjct: 4242 PRQVQGLQGKKVI---AIATGSLHCVCCTEDG 4270
Score = 317 (116.6 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 97/331 (29%), Positives = 148/331 (44%)
Query: 77 GRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
G Y WG N RGQLG G K++ PT L+ + + G VT DG A
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKV--PTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4011
Query: 135 GWNKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
G+ G+LG G + P+ ++ + + A G + LSS EG + + G +
Sbjct: 4012 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAE 4069
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
G+LGHG + + RPR I +L G +V VA G H+ V + G +Y
Sbjct: 4070 DGKLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLY 4115
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG- 310
TWG G YGRLGH + +D+ P+ V+ Q + V+ + +G + C ++ WG
Sbjct: 4116 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI--DIACGSGDAQTLCLTDDDTVWSWGD 4173
Query: 311 ----KLKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGY 364
KL G D P + L+G + ++ G+ S + +WG Y LG+
Sbjct: 4174 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4233
Query: 365 GPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
G P++V L+G VI++A G H
Sbjct: 4234 G--SDDHVRRPRQVQGLQGKKVIAIATGSLH 4262
Score = 288 (106.4 bits), Expect = 6.0e-23, P = 6.0e-23
Identities = 94/339 (27%), Positives = 151/339 (44%)
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
AV +G+ Y G G+LG G PT++ + IKK +G H + ++ +G
Sbjct: 4001 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4060
Query: 130 NSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVS-EVTATACGADFTVWLSSVEGASILNA 187
++G + G+LG G+ R+ + P + L EV A G + +++ +
Sbjct: 4061 EVYSWGEAEDGKLGHGN-RSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAA--GDLYTW 4117
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGH DS E Q +P+ + AL G ++ +ACG+ T+ +
Sbjct: 4118 GKGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVIDIACGSGDAQTLCLT 4163
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG VP ++D V+ E GS S G
Sbjct: 4164 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC----GSQFSVALTKSGA 4219
Query: 306 LYMWGK-----LKNNGDDWMY-PKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQ 358
+Y WGK L + DD + P+ + L G + + +G++H D +WG
Sbjct: 4220 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4279
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G V VACG H+L
Sbjct: 4280 EGQLGDGT--TNAIQRPRLVAALQGKKVNRVACGSAHTL 4316
Score = 281 (104.0 bits), Expect = 1.6e-29, Sum P(2) = 1.6e-29
Identities = 65/239 (27%), Positives = 113/239 (47%)
Query: 28 TCWDAVGRRKGA--LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRN 85
+C +A R G G + P ++ L ++ VA H A+ V+G+ ++WG
Sbjct: 3016 SCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3075
Query: 86 ERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG 145
+ G+LGH ++ D+P ++ L +I+ G SH+ +T G +G ++G+LG G
Sbjct: 3076 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHG 3135
Query: 146 SIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
+++P V+ L+ V ACG+ L+ + + + G +G+LG G N
Sbjct: 3136 DNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 3195
Query: 205 TKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
P+ I L G+ + ++ CG ++A+ G V+TWG G Y RLGH
Sbjct: 3196 I--------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3240
Score = 281 (104.0 bits), Expect = 2.0e-21, P = 2.0e-21
Identities = 74/277 (26%), Positives = 129/277 (46%)
Query: 39 ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
A + ++++P ++ L +I +AA H +A+ G Y+WG + G+LGHGD +
Sbjct: 477 AYNSDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 536
Query: 99 DRPTIVSELSKYKIKK----AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
+ P ++S S + K G +++ +T +G +G +G+LG GS +E P
Sbjct: 537 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 596
Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
V L +V ACG+ L+ E + + G YG+LG G + T
Sbjct: 597 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 648
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P+ I L ++KV CG+ ++A+ G VY+WG G RLGH ++ P+
Sbjct: 649 ------PKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 702
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
++ Q V+ ++AGS + +++ WG
Sbjct: 703 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 735
Score = 274 (101.5 bits), Expect = 1.9e-20, P = 1.9e-20
Identities = 94/346 (27%), Positives = 151/346 (43%)
Query: 75 VEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSL 132
+ + + WG N++ QLG G KI+ P+ LS + + G VT +G
Sbjct: 2958 IRTKVFVWGLNDKDQLGGLKGSKIKV--PSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3015
Query: 133 AFGWNKHGQLGSGSIRNEIE-PSPVRCLVSEVT---ATACGADFTVWLSSVEGASILNAG 188
+ G +G+LG G + P + L S V A G L+ V+G + + G
Sbjct: 3016 SCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-VDG-KVFSWG 3073
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
G+LGH ++ + +PR I AL + I +ACG++H+ A+ S G
Sbjct: 3074 EGDDGKLGH-----FSRMNCD---------KPRLIEALKTKRIRDIACGSSHSAALTSSG 3119
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQL 306
+YTWG G YGRLGH + + P+ V V + V+ ++ GS ++ A G +
Sbjct: 3120 ELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VACGSRDAQTLALTDEGLV 3175
Query: 307 YMWG-----KLKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQY 359
+ WG KL G + P+ + L+G + ++ G S + +WG Y
Sbjct: 3176 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3235
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G P+ V+ L G ++ VA G H L + D V
Sbjct: 3236 FRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQV 3279
Score = 261 (96.9 bits), Expect = 8.5e-19, P = 8.5e-19
Identities = 78/262 (29%), Positives = 116/262 (44%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L G+++ VAAG H V G YTWG+ G+LGH D + +P +V
Sbjct: 4084 PRVIESLRGIEVVDVAAG--GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA 4141
Query: 107 LSKYKIKK--AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EV 163
L +++ G+G + T+ +T+D ++G +G+LG G P + L V
Sbjct: 4142 LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGV 4201
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
CG+ F+V L+ GA + G Y +LGHG+D+ RPR +
Sbjct: 4202 VKVECGSQFSVALTK-SGA-VYTWGKGDYHRLGHGSDDHVR--------------RPRQV 4245
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR--- 280
L G+ ++ +A G+ H V G VYTWG G+LG PR V Q
Sbjct: 4246 QGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKV 4305
Query: 281 NNVLPPEAVISAGSVNSSCTAG 302
N V A A S + +AG
Sbjct: 4306 NRVACGSAHTLAWSTSKPASAG 4327
Score = 243 (90.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 75/280 (26%), Positives = 130/280 (46%)
Query: 137 NKHGQLGSGSIRNE-IEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
+++G++ + + ++ + P V+ L S + A +D +L+ + + G G+
Sbjct: 468 SRNGRVYTQAYNSDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGR 527
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LGHG + ++ V A+ + AG+ +V +ACG+ ++ A+ ++G +YTWG
Sbjct: 528 LGHG--DTVPLEEPKVISAFSGKQ--------AGKHVVHIACGSTYSAAITAEGELYTWG 577
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG---- 310
G YGRLGH +DE +P V + V+ + +G + GQ++ WG
Sbjct: 578 RGNYGRLGHGSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWSWGDGDY 635
Query: 311 -KLKNNGDDWMY-PK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYG 365
KL G D PK L DL +RC ++ + D SWG LG+G
Sbjct: 636 GKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIA--LTKDGQVYSWGKGDNQRLGHG 693
Query: 366 PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
++ PK ++ L+G VI VA G H L + + + V
Sbjct: 694 T--EEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 731
Score = 242 (90.2 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 79/285 (27%), Positives = 125/285 (43%)
Query: 129 GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
G+ +GW N GQLG P+P L + G + T++ + +G +
Sbjct: 3952 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG-KLYA 4010
Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
G G+LG G +T P + ++ I KVA G H +A+
Sbjct: 4011 TGYGAGGRLGIGGTESVST--------------PTLLESIQHVFIKKVAVNSGGKHCLAL 4056
Query: 245 DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
S+G VY+WG G+LGH + PR ++ + V+ ++AG +S+C G
Sbjct: 4057 SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD----VAAGGAHSACVTAAG 4112
Query: 305 QLYMWGKLK------NNGDDWMYPKPLMDLSGW---NLRCMDSGNMHHFVGADSSCI-SW 354
LY WGK + ++ +D + PK + L G ++ C SG+ D + SW
Sbjct: 4113 DLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIAC-GSGDAQTLCLTDDDTVWSW 4171
Query: 355 GHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G YG+LG G G +P K+D L G+ V+ V CG S+ +
Sbjct: 4172 GDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4214
Score = 231 (86.4 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 83/312 (26%), Positives = 136/312 (43%)
Query: 101 PTIVSELSKYKIKKAGAGRS--HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
P +V L+ I K A H + + G ++G G+LG G EP +
Sbjct: 485 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 544
Query: 159 LVSE-----VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
+ V ACG+ ++ +++ EG + G YG+LGHG+ ++D ++
Sbjct: 545 FSGKQAGKHVVHIACGSTYSAAITA-EG-ELYTWGRGNYGRLGHGS-----SEDEAI--- 594
Query: 214 YEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV 271
P +A L G ++ VACG+ T+AV G V++WG G YG+LG
Sbjct: 595 ------PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT 648
Query: 272 PRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN----NGDDW--MYPKPL 325
P+ ++ Q +V+ + GS S GQ+Y WGK N +G + YPK L
Sbjct: 649 PKLIEKLQDLDVIK----VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLL 704
Query: 326 MDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGM 384
L G + + +G+ H + DS SWG + + + + P + L+
Sbjct: 705 EGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHFDTLRVTKPEPTALPGLDSK 762
Query: 385 HVISVACGYGHS 396
H++ +ACG S
Sbjct: 763 HIVGIACGPAQS 774
Score = 186 (70.5 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 58/164 (35%), Positives = 77/164 (46%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + V C S VA+ G YTWG+ + +LGHG
Sbjct: 4181 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4237
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSP 155
RP V L K+ G H V TEDG +G N GQLG G+ N I+ P
Sbjct: 4238 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTT-NAIQRPRL 4296
Query: 156 VRCLVSE-VTATACGADFTV-WLSSVEG-ASILNAGLP-QYGQL 195
V L + V ACG+ T+ W +S A L A +P +Y L
Sbjct: 4297 VAALQGKKVNRVACGSAHTLAWSTSKPASAGKLPAQVPMEYNHL 4340
Score = 169 (64.5 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 38/120 (31%), Positives = 64/120 (53%)
Query: 65 CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVV 124
C + +A+ G +TWG+ + +LGHG + +P +V L KI G H +
Sbjct: 3213 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3272
Query: 125 VTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGAS 183
VT+ G A+G N HGQ G+G+ +P+ V+ L + +T ACG+ +V ++V+ A+
Sbjct: 3273 VTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVAT 3332
Score = 146 (56.5 bits), Expect = 4.9e-13, Sum P(2) = 4.9e-13
Identities = 51/200 (25%), Positives = 89/200 (44%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
+ P ++ L+G + VA G +A+ EG ++WG + G+LG G + P +
Sbjct: 3141 LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNI 3200
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L+ + + G ++ +T+ G +G + +LG GS + +P V L + +
Sbjct: 3201 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI 3260
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
A GA L+ + + G +GQ G+GT N K P +
Sbjct: 3261 VHVAVGALHC--LAVTDSGQVYAWGDNDHGQQGNGTTT-VNRK-------------PTLV 3304
Query: 224 AALAGETIVKVACGTNHTVA 243
L G+ I +VACG++H+VA
Sbjct: 3305 QGLEGQKITRVACGSSHSVA 3324
Score = 140 (54.3 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 41/147 (27%), Positives = 71/147 (48%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG +P + L +D+ + C S +A+ +G+ Y+WG+ + +LGHG +
Sbjct: 640 RGGSDG-CKTPKLIEKLQDLDV--IKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEE 696
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIR-NEIEPSP 155
P ++ L K+ AG +H + +TED ++G N Q ++R + EP+
Sbjct: 697 HVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-HFDTLRVTKPEPTA 755
Query: 156 VRCLVSE-VTATACG-ADFTVWLSSVE 180
+ L S+ + ACG A W S E
Sbjct: 756 LPGLDSKHIVGIACGPAQSFAWSSCSE 782
Score = 132 (51.5 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 49/201 (24%), Positives = 89/201 (44%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L G+ + VA G +AV G+ ++WG + G+LG G P ++ +
Sbjct: 595 PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK 654
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTA 165
L + K G ++ +T+DG ++G + +LG G+ + P + L + V
Sbjct: 655 LQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID 714
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
A G+ T L+ E + + + G Q H ++T +++ +P P A+
Sbjct: 715 VAAGS--THCLALTEDSEVHSWG--SNDQCQH-----FDT----LRVT---KPEPTALPG 758
Query: 226 LAGETIVKVACGTNHTVAVDS 246
L + IV +ACG + A S
Sbjct: 759 LDSKHIVGIACGPAQSFAWSS 779
Score = 122 (48.0 bits), Expect = 1.6e-29, Sum P(2) = 1.6e-29
Identities = 43/168 (25%), Positives = 74/168 (44%)
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
T++ G +Y WG G+LG E VP + L P +I + T
Sbjct: 3947 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA---TLRPVQLIGGEQTLFAVT 4003
Query: 301 AGGGQLYMWG-----KLKNNGDDWMYPKPLMD-LSGWNLR--CMDSGNMHHF-VGADSSC 351
A G +LY G +L G + + L++ + ++ ++SG H + ++
Sbjct: 4004 ADG-KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4062
Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
SWG A+ G+LG+G + P+ ++ L G+ V+ VA G HS +
Sbjct: 4063 YSWGEAEDGKLGHG--NRSPCDRPRVIESLRGIEVVDVAAGGAHSACV 4108
>UNIPROTKB|O95714 [details] [associations]
symbol:HERC2 "E3 ubiquitin-protein ligase HERC2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0020037 "heme binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=NAS] [GO:0006886 "intracellular protein transport"
evidence=NAS] [GO:0006281 "DNA repair" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IPI] [GO:0032183 "SUMO binding"
evidence=IDA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS00191 PROSITE:PS01357 PROSITE:PS50082
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS50294
PROSITE:PS51416 SMART:SM00119 SMART:SM00291 UniPathway:UPA00143
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
Reactome:REACT_6900 GO:GO:0006886 GO:GO:0005814 PROSITE:PS00678
GO:GO:0005743 GO:GO:0046872 GO:GO:0008270 GO:GO:0006281
GO:GO:0007283 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0005085 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
Pfam:PF03256 PROSITE:PS51284 GO:GO:0042787 GO:GO:0032183
Gene3D:2.30.30.30 InterPro:IPR021097 InterPro:IPR014722
Pfam:PF11515 SUPFAM:SSF56204 eggNOG:COG5021 CTD:8924 KO:K10595
OMA:QLAFTRD EMBL:AF071172 EMBL:AC091304 EMBL:AC126332 EMBL:AC135329
EMBL:AF224243 EMBL:AF224242 EMBL:AF224245 EMBL:AF224244
EMBL:AF224249 EMBL:AF224246 EMBL:AF224247 EMBL:AF224248
EMBL:AF224251 EMBL:AF224250 EMBL:AF224255 EMBL:AF224254
EMBL:AF224252 EMBL:AF224253 EMBL:AF224257 EMBL:AF224256
EMBL:AF225401 EMBL:AF225400 EMBL:AF225404 EMBL:AF225402
EMBL:AF225403 EMBL:AF225407 EMBL:AF225405 EMBL:AF225406
EMBL:AF225409 EMBL:AF225408 IPI:IPI00005826 RefSeq:NP_004658.3
UniGene:Hs.434890 UniGene:Hs.610412 UniGene:Hs.741019 PDB:2KEO
PDB:3KCI PDBsum:2KEO PDBsum:3KCI ProteinModelPortal:O95714
SMR:O95714 DIP:DIP-37632N IntAct:O95714 STRING:O95714
PhosphoSite:O95714 PaxDb:O95714 PRIDE:O95714
Ensembl:ENST00000261609 GeneID:8924 KEGG:hsa:8924 UCSC:uc001zbj.3
GeneCards:GC15M028356 H-InvDB:HIX0012044 H-InvDB:HIX0017540
H-InvDB:HIX0038121 H-InvDB:HIX0038320 H-InvDB:HIX0038830
H-InvDB:HIX0173226 H-InvDB:HIX0173299 H-InvDB:HIX0194348
HGNC:HGNC:4868 HPA:CAB017188 MIM:227220 MIM:605837
neXtProt:NX_O95714 PharmGKB:PA29243 HOVERGEN:HBG081598
InParanoid:O95714 OrthoDB:EOG41C6V9 PhylomeDB:O95714
EvolutionaryTrace:O95714 GenomeRNAi:8924 NextBio:33552
ArrayExpress:O95714 Bgee:O95714 Genevestigator:O95714
GermOnline:ENSG00000128731 InterPro:IPR006624 SMART:SM00706
Uniprot:O95714
Length = 4834
Score = 323 (118.8 bits), Expect = 5.8e-27, P = 5.8e-27
Identities = 106/374 (28%), Positives = 170/374 (45%)
Query: 38 GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
G L G+ + P+ L +++ VA G S AV VEG+ Y G G+LG G
Sbjct: 2973 GGLKGSKIKVPSFSETLSALNVVQVAGGSKSLF--AVTVEGKVYACGEATNGRLGLGISS 3030
Query: 97 QR-DRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
P ++ LS Y +KK +G H +T DG ++G G+LG S N +P
Sbjct: 3031 GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKP 3090
Query: 154 SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
+ L ++ + ACG+ + L+S + GL +YG+LGHG D++ +L
Sbjct: 3091 RLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHG--------DNTTQL 3140
Query: 213 AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
+P+ + L G +++VACG+ T+A+ +G V++WG G +G+LG +
Sbjct: 3141 ------KPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 3194
Query: 271 VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKPLM 326
+P+ ++ V I G+ S G ++ WGK +G D KP +
Sbjct: 3195 IPQNIERLNGQGVCQ----IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQV 3250
Query: 327 --DLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
L G + + G +H DS + +WG +G+ G G + P V LEG
Sbjct: 3251 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEG 3308
Query: 384 MHVISVACGYGHSL 397
+ VACG HS+
Sbjct: 3309 QKITRVACGSSHSV 3322
Score = 319 (117.4 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 87/272 (31%), Positives = 127/272 (46%)
Query: 34 GRRKGALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH 92
G R G VS PT L + V I+ VA HC+A+ EG Y+WG E G+LGH
Sbjct: 4014 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 4073
Query: 93 GDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE 152
G++ DRP ++ L ++ AG +H+ VT G+ +G ++G+LG ++++
Sbjct: 4074 GNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLK 4133
Query: 153 PSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVK 211
P V L V ACG+ L + ++ + G YG+LG G + K
Sbjct: 4134 PKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD-------GCK 4186
Query: 212 LAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV 271
+ P I +L G +VKV CG+ +VA+ G VYTWG G Y RLGH
Sbjct: 4187 V-------PMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR 4239
Query: 272 PRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
PR+V Q V+ A+ + CT G
Sbjct: 4240 PRQVQGLQGKKVI---AIATGSLHCVCCTEDG 4268
Score = 316 (116.3 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 97/331 (29%), Positives = 148/331 (44%)
Query: 77 GRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
G Y WG N RGQLG G K++ PT L+ + + G VT DG A
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKV--PTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4009
Query: 135 GWNKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
G+ G+LG G + P+ ++ + + A G + LSS EG + + G +
Sbjct: 4010 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAE 4067
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
G+LGHG + + RPR I +L G +V VA G H+ V + G +Y
Sbjct: 4068 DGKLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLY 4113
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG- 310
TWG G YGRLGH + +D+ P+ V+ Q + V+ + +G + C ++ WG
Sbjct: 4114 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--DIACGSGDAQTLCLTDDDTVWSWGD 4171
Query: 311 ----KLKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGY 364
KL G D P + L+G + ++ G+ S + +WG Y LG+
Sbjct: 4172 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4231
Query: 365 GPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
G P++V L+G VI++A G H
Sbjct: 4232 G--SDDHVRRPRQVQGLQGKKVIAIATGSLH 4260
Score = 289 (106.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 95/339 (28%), Positives = 151/339 (44%)
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
AV +G+ Y G G+LG G PT++ + IKK +G H + ++ +G
Sbjct: 3999 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4058
Query: 130 NSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVS-EVTATACGADFTVWLSSVEGASILNA 187
++G + G+LG G+ R+ + P + L EV A G + +++ +
Sbjct: 4059 EVYSWGEAEDGKLGHGN-RSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAA--GDLYTW 4115
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGH DS E Q +P+ + AL G +V +ACG+ T+ +
Sbjct: 4116 GKGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVVDIACGSGDAQTLCLT 4161
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG VP ++D V+ E GS S G
Sbjct: 4162 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC----GSQFSVALTKSGA 4217
Query: 306 LYMWGK-----LKNNGDDWMY-PKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQ 358
+Y WGK L + DD + P+ + L G + + +G++H D +WG
Sbjct: 4218 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4277
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G V VACG H+L
Sbjct: 4278 EGQLGDGT--TNAIQRPRLVAALQGKKVNRVACGSAHTL 4314
Score = 283 (104.7 bits), Expect = 9.1e-22, P = 9.1e-22
Identities = 102/363 (28%), Positives = 158/363 (43%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
IR AAG S A + + + WG N++ QLG G KI+ P+ LS + +
Sbjct: 2944 IRKKAAGLES----AATIRTKVFVWGLNDKDQLGGLKGSKIKV--PSFSETLSALNVVQV 2997
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVSEVT---ATACGAD 171
G VT +G A G +G+LG G + P + L S V A G
Sbjct: 2998 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGR 3057
Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
L+ V+G + + G G+LGH ++ + +PR I AL + I
Sbjct: 3058 HATALT-VDG-KVFSWGEGDDGKLGH-----FSRMNCD---------KPRLIEALKTKRI 3101
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
+ACG++H+ A+ S G +YTWG G YGRLGH + + P+ V V + V+ ++
Sbjct: 3102 RDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VA 3157
Query: 292 AGSVNSSCTA--GGGQLYMWG-----KLKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHH 343
GS ++ A G ++ WG KL G + P+ + L+G + ++ G
Sbjct: 3158 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3217
Query: 344 FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
S + +WG Y LG+G P+ V+ L G ++ VA G H L + D
Sbjct: 3218 LALTKSGVVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS 3275
Query: 403 TNV 405
V
Sbjct: 3276 GQV 3278
Score = 280 (103.6 bits), Expect = 2.3e-29, Sum P(2) = 2.3e-29
Identities = 65/238 (27%), Positives = 112/238 (47%)
Query: 29 CWDAVGRRKGA--LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNE 86
C +A R G G + P ++ L ++ VA H A+ V+G+ ++WG +
Sbjct: 3016 CGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGD 3075
Query: 87 RGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS 146
G+LGH ++ D+P ++ L +I+ G SH+ +T G +G ++G+LG G
Sbjct: 3076 DGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3135
Query: 147 IRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNT 205
+++P V+ L+ V ACG+ L+ + + + G +G+LG G N
Sbjct: 3136 NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI 3195
Query: 206 KDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
P+ I L G+ + ++ CG ++A+ G V+TWG G Y RLGH
Sbjct: 3196 --------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3239
Score = 279 (103.3 bits), Expect = 3.8e-21, P = 3.8e-21
Identities = 75/277 (27%), Positives = 128/277 (46%)
Query: 39 ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
A + + ++P ++ L +I +AA H +A+ G Y+WG + G+LGHGD +
Sbjct: 476 AYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 535
Query: 99 DRPTIVSELSKYKIKK----AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
+ P ++S S + K G +++ +T +G +G +G+LG GS +E P
Sbjct: 536 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 595
Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
V L +V ACG+ L+ E + + G YG+LG G + T
Sbjct: 596 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 647
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P+ I L +VKV CG+ ++A+ G VY+WG G RLGH ++ P+
Sbjct: 648 ------PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 701
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
++ Q V+ ++AGS + +++ WG
Sbjct: 702 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 734
Score = 262 (97.3 bits), Expect = 6.3e-19, P = 6.3e-19
Identities = 78/262 (29%), Positives = 116/262 (44%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L G+++ VAAG H V G YTWG+ G+LGH D + +P +V
Sbjct: 4082 PRVIESLRGIEVVDVAAG--GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA 4139
Query: 107 LSKYKIKK--AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EV 163
L +++ G+G + T+ +T+D ++G +G+LG G P + L V
Sbjct: 4140 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGV 4199
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
CG+ F+V L+ GA + G Y +LGHG+D+ RPR +
Sbjct: 4200 VKVECGSQFSVALTK-SGA-VYTWGKGDYHRLGHGSDDHVR--------------RPRQV 4243
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR--- 280
L G+ ++ +A G+ H V G VYTWG G+LG PR V Q
Sbjct: 4244 QGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKV 4303
Query: 281 NNVLPPEAVISAGSVNSSCTAG 302
N V A A S + +AG
Sbjct: 4304 NRVACGSAHTLAWSTSKPASAG 4325
Score = 243 (90.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 75/280 (26%), Positives = 130/280 (46%)
Query: 137 NKHGQLGSGSIRNE-IEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
+++G++ + + ++ + P V+ L S + A +D +L+ + + G G+
Sbjct: 467 SRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGR 526
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LGHG + ++ V A+ + AG+ +V +ACG+ ++ A+ ++G +YTWG
Sbjct: 527 LGHG--DTVPLEEPKVISAFSGKQ--------AGKHVVHIACGSTYSAAITAEGELYTWG 576
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG---- 310
G YGRLGH +DE +P V + V+ + +G + GQ++ WG
Sbjct: 577 RGNYGRLGHGSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWSWGDGDY 634
Query: 311 -KLKNNGDDWMY-PK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYG 365
KL G D PK L DL +RC ++ + D SWG LG+G
Sbjct: 635 GKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA--LTKDGQVYSWGKGDNQRLGHG 692
Query: 366 PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
++ PK ++ L+G VI VA G H L + + + V
Sbjct: 693 T--EEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 730
Score = 242 (90.2 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 79/285 (27%), Positives = 125/285 (43%)
Query: 129 GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
G+ +GW N GQLG P+P L + G + T++ + +G +
Sbjct: 3950 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG-KLYA 4008
Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
G G+LG G +T P + ++ I KVA G H +A+
Sbjct: 4009 TGYGAGGRLGIGGTESVST--------------PTLLESIQHVFIKKVAVNSGGKHCLAL 4054
Query: 245 DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
S+G VY+WG G+LGH + PR ++ + V+ ++AG +S+C G
Sbjct: 4055 SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD----VAAGGAHSACVTAAG 4110
Query: 305 QLYMWGKLK------NNGDDWMYPKPLMDLSGW---NLRCMDSGNMHHFVGADSSCI-SW 354
LY WGK + ++ +D + PK + L G ++ C SG+ D + SW
Sbjct: 4111 DLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIAC-GSGDAQTLCLTDDDTVWSW 4169
Query: 355 GHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G YG+LG G G +P K+D L G+ V+ V CG S+ +
Sbjct: 4170 GDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4212
Score = 228 (85.3 bits), Expect = 5.7e-15, P = 5.7e-15
Identities = 83/312 (26%), Positives = 136/312 (43%)
Query: 101 PTIVSELSKYKIKKAGAGRS--HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
P +V L+ I K A H + + G ++G G+LG G EP +
Sbjct: 484 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 543
Query: 159 LVSE-----VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
+ V ACG+ ++ +++ EG + G YG+LGHG+ ++D ++
Sbjct: 544 FSGKQAGKHVVHIACGSTYSAAITA-EG-ELYTWGRGNYGRLGHGS-----SEDEAI--- 593
Query: 214 YEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV 271
P +A L G ++ VACG+ T+AV G V++WG G YG+LG
Sbjct: 594 ------PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT 647
Query: 272 PRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN----NGDDW--MYPKPL 325
P+ ++ Q +V+ + GS S GQ+Y WGK N +G + YPK L
Sbjct: 648 PKLIEKLQDLDVVK----VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLL 703
Query: 326 MDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGM 384
L G + + +G+ H + DS SWG + + + + P + L+
Sbjct: 704 EGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHFDTLRVTKPEPAALPGLDTK 761
Query: 385 HVISVACGYGHS 396
H++ +ACG S
Sbjct: 762 HIVGIACGPAQS 773
Score = 186 (70.5 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 58/164 (35%), Positives = 77/164 (46%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + V C S VA+ G YTWG+ + +LGHG
Sbjct: 4179 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4235
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSP 155
RP V L K+ G H V TEDG +G N GQLG G+ N I+ P
Sbjct: 4236 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTT-NAIQRPRL 4294
Query: 156 VRCLVSE-VTATACGADFTV-WLSSVEG-ASILNAGLP-QYGQL 195
V L + V ACG+ T+ W +S A L A +P +Y L
Sbjct: 4295 VAALQGKKVNRVACGSAHTLAWSTSKPASAGKLPAQVPMEYNHL 4338
Score = 169 (64.5 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 38/120 (31%), Positives = 64/120 (53%)
Query: 65 CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVV 124
C + +A+ G +TWG+ + +LGHG + +P +V L KI G H +
Sbjct: 3212 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3271
Query: 125 VTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGAS 183
VT+ G A+G N HGQ G+G+ +P+ V+ L + +T ACG+ +V ++V+ A+
Sbjct: 3272 VTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVAT 3331
Score = 146 (56.5 bits), Expect = 4.9e-13, Sum P(2) = 4.9e-13
Identities = 51/200 (25%), Positives = 89/200 (44%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
+ P ++ L+G + VA G +A+ EG ++WG + G+LG G + P +
Sbjct: 3140 LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNI 3199
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L+ + + G ++ +T+ G +G + +LG GS + +P V L + +
Sbjct: 3200 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI 3259
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
A GA L+ + + G +GQ G+GT N K P +
Sbjct: 3260 VHVAVGALHC--LAVTDSGQVYAWGDNDHGQQGNGTTT-VNRK-------------PTLV 3303
Query: 224 AALAGETIVKVACGTNHTVA 243
L G+ I +VACG++H+VA
Sbjct: 3304 QGLEGQKITRVACGSSHSVA 3323
Score = 139 (54.0 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 41/147 (27%), Positives = 69/147 (46%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG +P + L +D+ V C S +A+ +G+ Y+WG+ + +LGHG +
Sbjct: 639 RGGSDG-CKTPKLIEKLQDLDV--VKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEE 695
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIR-NEIEPSP 155
P ++ L K+ AG +H + +TED ++G N Q ++R + EP+
Sbjct: 696 HVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-HFDTLRVTKPEPAA 754
Query: 156 VRCL-VSEVTATACG-ADFTVWLSSVE 180
+ L + ACG A W S E
Sbjct: 755 LPGLDTKHIVGIACGPAQSFAWSSCSE 781
Score = 131 (51.2 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 49/201 (24%), Positives = 89/201 (44%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L G+ + VA G +AV G+ ++WG + G+LG G P ++ +
Sbjct: 594 PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK 653
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTA 165
L + K G ++ +T+DG ++G + +LG G+ + P + L + V
Sbjct: 654 LQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID 713
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
A G+ T L+ E + + + G Q H ++T +++ +P P A+
Sbjct: 714 VAAGS--THCLALTEDSEVHSWG--SNDQCQH-----FDT----LRVT---KPEPAALPG 757
Query: 226 LAGETIVKVACGTNHTVAVDS 246
L + IV +ACG + A S
Sbjct: 758 LDTKHIVGIACGPAQSFAWSS 778
Score = 122 (48.0 bits), Expect = 2.3e-29, Sum P(2) = 2.3e-29
Identities = 43/168 (25%), Positives = 74/168 (44%)
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
T++ G +Y WG G+LG E VP + L P +I + T
Sbjct: 3945 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA---TLRPVQLIGGEQTLFAVT 4001
Query: 301 AGGGQLYMWG-----KLKNNGDDWMYPKPLMD-LSGWNLR--CMDSGNMHHF-VGADSSC 351
A G +LY G +L G + + L++ + ++ ++SG H + ++
Sbjct: 4002 ADG-KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4060
Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
SWG A+ G+LG+G + P+ ++ L G+ V+ VA G HS +
Sbjct: 4061 YSWGEAEDGKLGHG--NRSPCDRPRVIESLRGIEVVDVAAGGAHSACV 4106
>UNIPROTKB|E2RDC2 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0032183 "SUMO binding" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0020037 "heme
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005743
GO:GO:0046872 GO:GO:0008270 GO:GO:0006281 GO:GO:0007283
GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
Gene3D:2.30.30.30 InterPro:IPR021097 InterPro:IPR014722
Pfam:PF11515 SUPFAM:SSF56204 GeneTree:ENSGT00700000104208 CTD:8924
KO:K10595 OMA:QLAFTRD InterPro:IPR006624 SMART:SM00706
EMBL:AAEX03002160 EMBL:AAEX03002161 EMBL:AAEX03002162
RefSeq:XP_536160.2 ProteinModelPortal:E2RDC2
Ensembl:ENSCAFT00000015697 GeneID:479005 KEGG:cfa:479005
Uniprot:E2RDC2
Length = 4837
Score = 320 (117.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 87/272 (31%), Positives = 127/272 (46%)
Query: 34 GRRKGALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH 92
G R G VS PT L + V I+ VA HC+A+ EG Y+WG E G+LGH
Sbjct: 4017 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 4076
Query: 93 GDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE 152
G++ DRP ++ L ++ AG +H+ VT G+ +G ++G+LG ++++
Sbjct: 4077 GNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLK 4136
Query: 153 PSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVK 211
P V L V ACG+ L + ++ + G YG+LG G + K
Sbjct: 4137 PKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD-------GCK 4189
Query: 212 LAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV 271
+ P I +L G +VKV CG+ +VA+ G VYTWG G Y RLGH
Sbjct: 4190 V-------PMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR 4242
Query: 272 PRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
PR+V Q V+ A+ + CT G
Sbjct: 4243 PRQVQGLQGKKVI---AIATGSLHCVCCTEDG 4271
Score = 320 (117.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 105/374 (28%), Positives = 170/374 (45%)
Query: 38 GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DK 95
G L G+ + P+ L +++ VA G S AV VEG+ Y G G+LG G
Sbjct: 2974 GGLKGSKIKVPSFSETLSALNVVQVAGGSKSLF--AVTVEGKVYACGEATNGRLGLGLSS 3031
Query: 96 IQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
P ++ LS Y +KK +G H +T DG ++G G+LG S N +P
Sbjct: 3032 GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKP 3091
Query: 154 SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
+ L ++ + ACG+ + L+S + GL +YG+LGHG D++ +L
Sbjct: 3092 RLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHG--------DNTTQL 3141
Query: 213 AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
+P+ + L G +++VACG+ T+A+ +G V++WG G +G+LG +
Sbjct: 3142 ------KPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 3195
Query: 271 VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKPLM 326
+P+ ++ V I G+ S G ++ WGK +G D KP +
Sbjct: 3196 IPQNIERLNGQGVCQ----IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQV 3251
Query: 327 --DLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
L G + + G +H D+ + +WG +G+ G G + P V LEG
Sbjct: 3252 VEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEG 3309
Query: 384 MHVISVACGYGHSL 397
+ VACG HS+
Sbjct: 3310 QKITRVACGSSHSV 3323
Score = 317 (116.6 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 97/331 (29%), Positives = 148/331 (44%)
Query: 77 GRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
G Y WG N RGQLG G K++ PT L+ + + G VT DG A
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKV--PTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4012
Query: 135 GWNKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
G+ G+LG G + P+ ++ + + A G + LSS EG + + G +
Sbjct: 4013 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAE 4070
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
G+LGHG + + RPR I +L G +V VA G H+ V + G +Y
Sbjct: 4071 DGKLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLY 4116
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG- 310
TWG G YGRLGH + +D+ P+ V+ Q + V+ + +G + C ++ WG
Sbjct: 4117 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--DVACGSGDAQTLCLTDDDTVWSWGD 4174
Query: 311 ----KLKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGY 364
KL G D P + L+G + ++ G+ S + +WG Y LG+
Sbjct: 4175 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4234
Query: 365 GPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
G P++V L+G VI++A G H
Sbjct: 4235 G--SDDHVRRPRQVQGLQGKKVIAIATGSLH 4263
Score = 290 (107.1 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 96/339 (28%), Positives = 151/339 (44%)
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
AV +G+ Y G G+LG G PT++ + IKK +G H + ++ +G
Sbjct: 4002 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4061
Query: 130 NSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVS-EVTATACGADFTVWLSSVEGASILNA 187
++G + G+LG G+ R+ + P + L EV A G + +++ +
Sbjct: 4062 EVYSWGEAEDGKLGHGN-RSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAA--GDLYTW 4118
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGH DS E Q +P+ + AL G +V VACG+ T+ +
Sbjct: 4119 GKGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVVDVACGSGDAQTLCLT 4164
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG VP ++D V+ E GS S G
Sbjct: 4165 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC----GSQFSVALTKSGA 4220
Query: 306 LYMWGK-----LKNNGDDWMY-PKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQ 358
+Y WGK L + DD + P+ + L G + + +G++H D +WG
Sbjct: 4221 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4280
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G V VACG H+L
Sbjct: 4281 EGQLGDGT--TNAIQRPRLVAALQGKKVNRVACGSAHTL 4317
Score = 283 (104.7 bits), Expect = 9.1e-22, P = 9.1e-22
Identities = 102/363 (28%), Positives = 158/363 (43%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
IR AAG S A + + + WG N++ QLG G KI+ P+ LS + +
Sbjct: 2945 IRKKAAGLES----AATIRTKVFVWGLNDKDQLGGLKGSKIKV--PSFSETLSALNVVQV 2998
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVSEVT---ATACGAD 171
G VT +G A G +G+LG G + P + L S V A G
Sbjct: 2999 AGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGR 3058
Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
L+ V+G + + G G+LGH ++ + +PR I AL + I
Sbjct: 3059 HATALT-VDG-KVFSWGEGDDGKLGH-----FSRMNCD---------KPRLIEALKTKRI 3102
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
+ACG++H+ A+ S G +YTWG G YGRLGH + + P+ V V + V+ ++
Sbjct: 3103 RDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VA 3158
Query: 292 AGSVNSSCTA--GGGQLYMWG-----KLKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHH 343
GS ++ A G ++ WG KL G + P+ + L+G + ++ G
Sbjct: 3159 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3218
Query: 344 FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
S + +WG Y LG+G P+ V+ L G ++ VA G H L + D
Sbjct: 3219 LALTKSGVVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDA 3276
Query: 403 TNV 405
V
Sbjct: 3277 GQV 3279
Score = 280 (103.6 bits), Expect = 2.4e-29, Sum P(2) = 2.4e-29
Identities = 65/238 (27%), Positives = 112/238 (47%)
Query: 29 CWDAVGRRKGA--LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNE 86
C +A R G G + P ++ L ++ VA H A+ V+G+ ++WG +
Sbjct: 3017 CGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGD 3076
Query: 87 RGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS 146
G+LGH ++ D+P ++ L +I+ G SH+ +T G +G ++G+LG G
Sbjct: 3077 DGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3136
Query: 147 IRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNT 205
+++P V+ L+ V ACG+ L+ + + + G +G+LG G N
Sbjct: 3137 NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI 3196
Query: 206 KDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
P+ I L G+ + ++ CG ++A+ G V+TWG G Y RLGH
Sbjct: 3197 --------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3240
Score = 279 (103.3 bits), Expect = 3.8e-21, P = 3.8e-21
Identities = 75/277 (27%), Positives = 128/277 (46%)
Query: 39 ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
A + + ++P ++ L +I +AA H +A+ G Y+WG + G+LGHGD +
Sbjct: 477 AYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 536
Query: 99 DRPTIVSELSKYKIKK----AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
+ P ++S S + K G +++ +T +G +G +G+LG GS +E P
Sbjct: 537 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 596
Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
V L +V ACG+ L+ E + + G YG+LG G + T
Sbjct: 597 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 648
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P+ I L +VKV CG+ ++A+ G VY+WG G RLGH ++ P+
Sbjct: 649 ------PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 702
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
++ Q V+ ++AGS + +++ WG
Sbjct: 703 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 735
Score = 262 (97.3 bits), Expect = 6.3e-19, P = 6.3e-19
Identities = 78/262 (29%), Positives = 116/262 (44%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L G+++ VAAG H V G YTWG+ G+LGH D + +P +V
Sbjct: 4085 PRVIESLRGIEVVDVAAG--GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA 4142
Query: 107 LSKYKIKKA--GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EV 163
L +++ G+G + T+ +T+D ++G +G+LG G P + L V
Sbjct: 4143 LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGV 4202
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
CG+ F+V L+ GA + G Y +LGHG+D+ RPR +
Sbjct: 4203 VKVECGSQFSVALTK-SGA-VYTWGKGDYHRLGHGSDDHVR--------------RPRQV 4246
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR--- 280
L G+ ++ +A G+ H V G VYTWG G+LG PR V Q
Sbjct: 4247 QGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKV 4306
Query: 281 NNVLPPEAVISAGSVNSSCTAG 302
N V A A S + +AG
Sbjct: 4307 NRVACGSAHTLAWSTSKPASAG 4328
Score = 243 (90.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 75/280 (26%), Positives = 130/280 (46%)
Query: 137 NKHGQLGSGSIRNE-IEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
+++G++ + + ++ + P V+ L S + A +D +L+ + + G G+
Sbjct: 468 SRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGR 527
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LGHG + ++ V A+ + AG+ +V +ACG+ ++ A+ ++G +YTWG
Sbjct: 528 LGHG--DTVPLEEPKVISAFSGKQ--------AGKHVVHIACGSTYSAAITAEGELYTWG 577
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG---- 310
G YGRLGH +DE +P V + V+ + +G + GQ++ WG
Sbjct: 578 RGNYGRLGHGSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWSWGDGDY 635
Query: 311 -KLKNNGDDWMY-PK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYG 365
KL G D PK L DL +RC ++ + D SWG LG+G
Sbjct: 636 GKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA--LTKDGQVYSWGKGDNQRLGHG 693
Query: 366 PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
++ PK ++ L+G VI VA G H L + + + V
Sbjct: 694 T--EEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 731
Score = 241 (89.9 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 79/285 (27%), Positives = 125/285 (43%)
Query: 129 GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
G+ +GW N GQLG P+P L + G + T++ + +G +
Sbjct: 3953 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG-KLYA 4011
Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
G G+LG G +T P + ++ I KVA G H +A+
Sbjct: 4012 TGYGAGGRLGIGGTESVST--------------PTLLESIQHVFIKKVAVNSGGKHCLAL 4057
Query: 245 DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
S+G VY+WG G+LGH + PR ++ + V+ ++AG +S+C G
Sbjct: 4058 SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD----VAAGGAHSACVTAAG 4113
Query: 305 QLYMWGKLK------NNGDDWMYPKPLMDLSGW---NLRCMDSGNMHHFVGADSSCI-SW 354
LY WGK + ++ +D + PK + L G ++ C SG+ D + SW
Sbjct: 4114 DLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVAC-GSGDAQTLCLTDDDTVWSW 4172
Query: 355 GHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G YG+LG G G +P K+D L G+ V+ V CG S+ +
Sbjct: 4173 GDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4215
Score = 228 (85.3 bits), Expect = 5.7e-15, P = 5.7e-15
Identities = 83/312 (26%), Positives = 136/312 (43%)
Query: 101 PTIVSELSKYKIKKAGAGRS--HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
P +V L+ I K A H + + G ++G G+LG G EP +
Sbjct: 485 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 544
Query: 159 LVSE-----VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
+ V ACG+ ++ +++ EG + G YG+LGHG+ ++D ++
Sbjct: 545 FSGKQAGKHVVHIACGSTYSAAITA-EG-ELYTWGRGNYGRLGHGS-----SEDEAI--- 594
Query: 214 YEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV 271
P +A L G ++ VACG+ T+AV G V++WG G YG+LG
Sbjct: 595 ------PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT 648
Query: 272 PRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN----NGDDW--MYPKPL 325
P+ ++ Q +V+ + GS S GQ+Y WGK N +G + YPK L
Sbjct: 649 PKLIEKLQDLDVVK----VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLL 704
Query: 326 MDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGM 384
L G + + +G+ H + DS SWG + + + + P + L+
Sbjct: 705 EGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHFDTLRVTKPEPAALPGLDTK 762
Query: 385 HVISVACGYGHS 396
H++ +ACG S
Sbjct: 763 HIVGIACGPAQS 774
Score = 186 (70.5 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 58/164 (35%), Positives = 77/164 (46%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + V C S VA+ G YTWG+ + +LGHG
Sbjct: 4182 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4238
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSP 155
RP V L K+ G H V TEDG +G N GQLG G+ N I+ P
Sbjct: 4239 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTT-NAIQRPRL 4297
Query: 156 VRCLVSE-VTATACGADFTV-WLSSVEG-ASILNAGLP-QYGQL 195
V L + V ACG+ T+ W +S A L A +P +Y L
Sbjct: 4298 VAALQGKKVNRVACGSAHTLAWSTSKPASAGKLPAQVPMEYNHL 4341
Score = 166 (63.5 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
Identities = 37/120 (30%), Positives = 64/120 (53%)
Query: 65 CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVV 124
C + +A+ G +TWG+ + +LGHG + +P +V L KI G H +
Sbjct: 3213 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3272
Query: 125 VTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGAS 183
VT+ G A+G N HGQ G+G+ +P+ V+ L + +T ACG+ +V ++++ A+
Sbjct: 3273 VTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTIDVAT 3332
Score = 146 (56.5 bits), Expect = 4.9e-13, Sum P(2) = 4.9e-13
Identities = 51/200 (25%), Positives = 89/200 (44%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
+ P ++ L+G + VA G +A+ EG ++WG + G+LG G + P +
Sbjct: 3141 LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNI 3200
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L+ + + G ++ +T+ G +G + +LG GS + +P V L + +
Sbjct: 3201 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI 3260
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
A GA L+ + + G +GQ G+GT N K P +
Sbjct: 3261 VHVAVGALHC--LAVTDAGQVYAWGDNDHGQQGNGTTT-VNRK-------------PTLV 3304
Query: 224 AALAGETIVKVACGTNHTVA 243
L G+ I +VACG++H+VA
Sbjct: 3305 QGLEGQKITRVACGSSHSVA 3324
Score = 139 (54.0 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 41/147 (27%), Positives = 69/147 (46%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG +P + L +D+ V C S +A+ +G+ Y+WG+ + +LGHG +
Sbjct: 640 RGGSDG-CKTPKLIEKLQDLDV--VKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEE 696
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIR-NEIEPSP 155
P ++ L K+ AG +H + +TED ++G N Q ++R + EP+
Sbjct: 697 HVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-HFDTLRVTKPEPAA 755
Query: 156 VRCL-VSEVTATACG-ADFTVWLSSVE 180
+ L + ACG A W S E
Sbjct: 756 LPGLDTKHIVGIACGPAQSFAWSSCSE 782
Score = 131 (51.2 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 49/201 (24%), Positives = 89/201 (44%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L G+ + VA G +AV G+ ++WG + G+LG G P ++ +
Sbjct: 595 PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK 654
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTA 165
L + K G ++ +T+DG ++G + +LG G+ + P + L + V
Sbjct: 655 LQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID 714
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
A G+ T L+ E + + + G Q H ++T +++ +P P A+
Sbjct: 715 VAAGS--THCLALTEDSEVHSWG--SNDQCQH-----FDT----LRVT---KPEPAALPG 758
Query: 226 LAGETIVKVACGTNHTVAVDS 246
L + IV +ACG + A S
Sbjct: 759 LDTKHIVGIACGPAQSFAWSS 779
Score = 122 (48.0 bits), Expect = 2.4e-29, Sum P(2) = 2.4e-29
Identities = 43/168 (25%), Positives = 74/168 (44%)
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
T++ G +Y WG G+LG E VP + L P +I + T
Sbjct: 3948 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA---TLRPVQLIGGEQTLFAVT 4004
Query: 301 AGGGQLYMWG-----KLKNNGDDWMYPKPLMD-LSGWNLR--CMDSGNMHHF-VGADSSC 351
A G +LY G +L G + + L++ + ++ ++SG H + ++
Sbjct: 4005 ADG-KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4063
Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
SWG A+ G+LG+G + P+ ++ L G+ V+ VA G HS +
Sbjct: 4064 YSWGEAEDGKLGHG--NRSPCDRPRVIESLRGIEVVDVAAGGAHSACV 4109
Score = 40 (19.1 bits), Expect = 8.8e-21, Sum P(2) = 8.8e-21
Identities = 9/35 (25%), Positives = 16/35 (45%)
Query: 264 REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSS 298
R + W +R ++ + + P AV + S SS
Sbjct: 3462 RLSPNPWQEKRGEMISSEDAVTPSAVTPSASSTSS 3496
>FB|FBgn0031107 [details] [associations]
symbol:HERC2 "HECT and RLD domain containing protein 2
ortholog (H. sapiens)" species:7227 "Drosophila melanogaster"
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=NAS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA;NAS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0020037 "heme binding" evidence=IEA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] Pfam:PF00632 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR009060 InterPro:IPR010606
Pfam:PF00173 Pfam:PF06701 PROSITE:PS50237 PROSITE:PS51416
SMART:SM00119 UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 GO:GO:0005814 GO:GO:0046872
EMBL:AE014298 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 InterPro:IPR015940 PROSITE:PS50030
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
PROSITE:PS51284 InterPro:IPR000859 SUPFAM:SSF49854 GO:GO:0042787
SUPFAM:SSF46934 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00700000104208 EMBL:AY113293 EMBL:AF189221
RefSeq:NP_608388.2 UniGene:Dm.3302 ProteinModelPortal:Q9VR91
SMR:Q9VR91 IntAct:Q9VR91 STRING:Q9VR91 PaxDb:Q9VR91
EnsemblMetazoa:FBtr0301344 GeneID:33035 KEGG:dme:Dmel_CG11734
UCSC:CG11734-RB CTD:8924 FlyBase:FBgn0031107 InParanoid:Q9VR91
KO:K10595 OMA:QLAFTRD OrthoDB:EOG48GTJ3 PhylomeDB:Q9VR91
GenomeRNAi:33035 NextBio:781623 Bgee:Q9VR91 GermOnline:CG11734
Uniprot:Q9VR91
Length = 4912
Score = 332 (121.9 bits), Expect = 6.5e-28, P = 6.5e-28
Identities = 77/239 (32%), Positives = 118/239 (49%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
PT L L V ++ VA HC+A+ EG Y WG E G+LGHG+++ DRP +V
Sbjct: 4125 PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEH 4184
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTA 165
L+ + G +H+ +T G+ L +G ++G+LG G +++ P V L+
Sbjct: 4185 LNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAID 4244
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
ACG+ L + ++ + G YG+LG G + KL Y+ I +
Sbjct: 4245 IACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSD-------GCKLPYK-------IES 4290
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
LAG +VKV CG+ +VA+ G VYTWG G + RLGH P++V Q ++
Sbjct: 4291 LAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKII 4349
Score = 318 (117.0 bits), Expect = 2.4e-29, Sum P(2) = 2.4e-29
Identities = 96/339 (28%), Positives = 152/339 (44%)
Query: 80 YTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
Y WG N RGQLG G +I+ PT LS + + G VT DG A G+
Sbjct: 4052 YGWGHNHRGQLGGLEGSRIKT--PTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYG 4109
Query: 138 KHGQLGSGSIRNEIEPSPVRCL----VSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + P+ + L V +V + G + L++ EG + G + G
Sbjct: 4110 SGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNS-GGKHCLALTT-EG-EVYAWGEGEDG 4166
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG +++Y+ RP+ + L G ++ +ACG+ H+ A+ + G+V TW
Sbjct: 4167 KLGHGN-----------RMSYD---RPKLVEHLNGMSVADIACGSAHSAAITASGHVLTW 4212
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG--- 310
G G YGRLGH + +D+ P+ V+ + + +G + C ++ WG
Sbjct: 4213 GKGRYGRLGHGDSEDQLRPKLVEALLGYRAI--DIACGSGDAQTLCITDDDNVWSWGDGD 4270
Query: 311 --KLKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
KL G D P + L+G + ++ G+ S + +WG + LG+G
Sbjct: 4271 YGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGS 4330
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
PKKV L+G +IS+A G H + D V
Sbjct: 4331 VDHVRR--PKKVAALQGKKIISIATGSLHCVACSDSGEV 4367
Score = 315 (115.9 bits), Expect = 4.1e-26, P = 4.1e-26
Identities = 112/390 (28%), Positives = 178/390 (45%)
Query: 25 CGSTCWDAVGRRK-GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTW 82
C W + + G L G+ V PT + + + +A G S V+ D G+ Y
Sbjct: 2986 CTVMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVSQD--GKVYAC 3043
Query: 83 GRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHG 140
G G+LG G P + L +Y +KK +G H + +T DG ++G + G
Sbjct: 3044 GEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3103
Query: 141 QLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
+LG G+ +P V L ++ ACG+ + +SS +G + GL +YG+LGHG
Sbjct: 3104 KLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISS-QG-ELYTWGLGEYGRLGHG- 3160
Query: 200 DNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGG 257
DN Q +P+ + ALAG +V+VACG+ T+A+ G V++WG G
Sbjct: 3161 DNT-------------TQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGD 3207
Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPE-------AVISAGSVNSSCTAGGGQLYMWG 310
+G+LG + P ++ V+ E A+ AG V T G G Y
Sbjct: 3208 FGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEV---WTWGKGDYY--- 3261
Query: 311 KLKNNGDDWMY-PKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYG-PY 367
+L + GD + P+P+ L G + + G +H D+ + +WG +G+ G G +
Sbjct: 3262 RLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTF 3321
Query: 368 GQKSSAMPKKVDILEGMHVISVACGYGHSL 397
K A+ V L+ + V VACG HS+
Sbjct: 3322 VNKKPAL---VIGLDAVFVNRVACGSSHSI 3348
Score = 298 (110.0 bits), Expect = 3.0e-27, Sum P(2) = 3.0e-27
Identities = 103/339 (30%), Positives = 157/339 (46%)
Query: 82 WGRNERGQLG--HGDKIQRDRPTIVSELSKYK-IKKAGAGRSHTVVVTEDGNSLAFGWNK 138
WG N++ QLG G K++ PT +S+ + I AG +S +V++DG A G
Sbjct: 2991 WGLNDKEQLGGLKGSKVKV--PTFSQTISRLRPIHIAGGSKS-LFIVSQDGKVYACGEGT 3047
Query: 139 HGQLGSGSIRNEIEPS--PV-RCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
+G+LG G N P PV R V + A G + L+ ++G + + G + G+L
Sbjct: 3048 NGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALT-LDG-KVFSWGEGEDGKL 3105
Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
GHG N T D +PR + AL + I VACG++H+ A+ S+G +YTWG
Sbjct: 3106 GHG--NR-TTLD-----------KPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGL 3151
Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQLYMWG--- 310
G YGRLGH + + P+ V V+ ++ GS ++ A G ++ WG
Sbjct: 3152 GEYGRLGHGDNTTQLKPKLVTALAGRRVVQ----VACGSRDAQTLALTEDGAVFSWGDGD 3207
Query: 311 --KLKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
KL G + P + LSG + ++ G + + +WG Y LG+G
Sbjct: 3208 FGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHG- 3266
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
G + P+ + L G VI VA G H L + D V
Sbjct: 3267 -GDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQV 3304
Score = 273 (101.2 bits), Expect = 2.6e-20, P = 2.6e-20
Identities = 79/249 (31%), Positives = 118/249 (47%)
Query: 42 GNLVS---PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
GN +S P + L G+ + +A G S H A+ G TWG+ G+LGHGD +
Sbjct: 4171 GNRMSYDRPKLVEHLNGMSVADIACG--SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQ 4228
Query: 99 DRPTIVSELSKYK-IKKA-GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP +V L Y+ I A G+G + T+ +T+D N ++G +G+LG G P +
Sbjct: 4229 LRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKI 4288
Query: 157 RCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
L V CG+ F+V L+ GA + G + +LGHG+ +
Sbjct: 4289 ESLAGLGVVKVECGSQFSVALTK-SGA-VYTWGKGDFHRLGHGSVDHVR----------- 4335
Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
RP+ +AAL G+ I+ +A G+ H VA G VYTWG G+LG PR V
Sbjct: 4336 ---RPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLV 4392
Query: 276 DVFQRNNVL 284
Q +++
Sbjct: 4393 AALQGKHIV 4401
Score = 219 (82.2 bits), Expect = 9.3e-22, Sum P(2) = 9.3e-22
Identities = 66/210 (31%), Positives = 102/210 (48%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
PT++ L ++ V GC + A+ G TWGR +LGHG+ R PT+V
Sbjct: 659 PTKIAALEQHCVQSVYCGC--SYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVA 716
Query: 107 LSKYKIKKA--GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT 164
LS + + G+G +H++ +T +G A+G +G+LG+G+ ++P V L V
Sbjct: 717 LSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESL-PRVQ 775
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
G+ F+V LSS EG + G LGH E + + SV PR ++
Sbjct: 776 RVFAGSQFSVALSS-EG-QLYTWGKATC--LGHQLV-ERSVQGCSV---------PRLVS 821
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
+L + IV VA H +A+ S G V+ WG
Sbjct: 822 SLQHKRIVDVAVSVAHCLALSSSGEVFGWG 851
Score = 203 (76.5 bits), Expect = 6.5e-20, Sum P(2) = 6.5e-20
Identities = 64/228 (28%), Positives = 103/228 (45%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
+A C H +A+D Y+WG E +LGHGD R PT ++ L ++ ++ G S
Sbjct: 619 IAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCS 678
Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSV 179
++ +T GN L +G + +LG G+ + P+ V L V A G+ L+
Sbjct: 679 YSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALT 738
Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
+ G YG+LG+G N S + E+ PR + +V G+
Sbjct: 739 SEGLVFAWGDGDYGKLGNG-----NCNGSLQPILVESLPR-----------VQRVFAGSQ 782
Query: 240 HTVAVDSKGYVYTWGFG---GYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+VA+ S+G +YTWG G+ +L R + VPR V Q ++
Sbjct: 783 FSVALSSEGQLYTWGKATCLGH-QLVERSVQGCSVPRLVSSLQHKRIV 829
Score = 167 (63.8 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 45/143 (31%), Positives = 66/143 (46%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG + P ++ L G+ + V C S VA+ G YTWG+ + +LGHG
Sbjct: 4276 RGGSDGCKL-PYKIESLAGLGV--VKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVD 4332
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP V+ L KI G H V ++ G +G N GQLG G++ P V
Sbjct: 4333 HVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLV 4392
Query: 157 RCLVSE-VTATACGADFTVWLSS 178
L + + CG+ T+ LS+
Sbjct: 4393 AALQGKHIVKVTCGSAHTLALST 4415
Score = 155 (59.6 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 33/91 (36%), Positives = 49/91 (53%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P I +LAG +VKV CG+ +VA+ G VYTWG G + RLGH P++V Q
Sbjct: 4285 PYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQ 4344
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
++ I+ GS++ + G++Y WG
Sbjct: 4345 GKKIIS----IATGSLHCVACSDSGEVYTWG 4371
Score = 155 (59.6 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 47/162 (29%), Positives = 79/162 (48%)
Query: 215 EAQPRPRAIAALAGETIVKVA--CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
EA+P P + +A + + +A C H +A+DS Y+WG G RLGH + VP
Sbjct: 602 EAEPLP--MEEVAHDVFISIAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVP 659
Query: 273 RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-----LKN-NGDDWMYPKPLM 326
++ +++ V ++V S +++ T GG L WG+ L + N DD P ++
Sbjct: 660 TKIAALEQHCV---QSVYCGCSYSAAITCGGN-LLTWGRGTYARLGHGNSDDRSLPTLVV 715
Query: 327 DLSGWNLR--CMDSGNMHHF-VGADSSCISWGHAQYGELGYG 365
LS + + SG+ H + ++ +WG YG+LG G
Sbjct: 716 ALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNG 757
Score = 149 (57.5 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 47/192 (24%), Positives = 86/192 (44%)
Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
A+ P IAAL + V CG +++ A+ G + TWG G Y RLGH D +P V
Sbjct: 655 ARAVPTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLV 714
Query: 276 DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG-----KLKNNGDDWMYPKPLMDLSG 330
+ V+ + + +G +S G ++ WG KL N + +P++ S
Sbjct: 715 VALSDHMVV--DVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSL-QPILVESL 771
Query: 331 WNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQ--KSSAMPKKVDILEGMHVI 387
++ + +G+ + ++ +WG A LG+ + + ++P+ V L+ ++
Sbjct: 772 PRVQRVFAGSQFSVALSSEGQLYTWGKATC--LGHQLVERSVQGCSVPRLVSSLQHKRIV 829
Query: 388 SVACGYGHSLVI 399
VA H L +
Sbjct: 830 DVAVSVAHCLAL 841
Score = 145 (56.1 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 40/141 (28%), Positives = 68/141 (48%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G +G+ +P + L G+ + V C + +A+ G +TWG+ + +LGHG
Sbjct: 3213 RGGSEGS-DTPHEIERLSGIGV--VQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQ 3269
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
+P + L ++ G H + VT+ G A+G N HGQ GSG+ +P+ V
Sbjct: 3270 HVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALV 3329
Query: 157 RCLVSE-VTATACGADFTV-W 175
L + V ACG+ ++ W
Sbjct: 3330 IGLDAVFVNRVACGSSHSIAW 3350
Score = 138 (53.6 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 48/200 (24%), Positives = 84/200 (42%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
+ P + L G + VA G +A+ +G ++WG + G+LG G D P +
Sbjct: 3166 LKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEI 3225
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
LS + + G ++ +T G +G + +LG G ++ +P P+ L V
Sbjct: 3226 ERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRV 3285
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
A GA L+ + + G +GQ G G N + K +P +
Sbjct: 3286 IHVAVGALHC--LAVTDAGQVYAWGDNDHGQQGSG--NTFVNK------------KPALV 3329
Query: 224 AALAGETIVKVACGTNHTVA 243
L + +VACG++H++A
Sbjct: 3330 IGLDAVFVNRVACGSSHSIA 3349
Score = 127 (49.8 bits), Expect = 9.3e-22, Sum P(2) = 9.3e-22
Identities = 44/159 (27%), Positives = 68/159 (42%)
Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
+Y WG G+LG E P + ++L P ++ G + G+L+
Sbjct: 4051 IYGWGHNHRGQLGGLEGSRIKTPTPCEAL---SLLRP-VQLAGGEQSLFAVTPDGKLFAT 4106
Query: 310 G-----KLKNNGDD-WMYPKPLMDLSGWNLR--CMDSGNMHHF-VGADSSCISWGHAQYG 360
G +L G D W P L L ++ ++SG H + + +WG + G
Sbjct: 4107 GYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDG 4166
Query: 361 ELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+LG+G + S PK V+ L GM V +ACG HS I
Sbjct: 4167 KLGHG--NRMSYDRPKLVEHLNGMSVADIACGSAHSAAI 4203
Score = 94 (38.1 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 34/155 (21%), Positives = 64/155 (41%)
Query: 52 PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSK-Y 110
P + + C + + EG+ YTW +L + P + E++
Sbjct: 566 PTLSCRFQIKQVACCETQMLILSQEGKLYTW------RLAKPEA----EPLPMEEVAHDV 615
Query: 111 KIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATA 167
I AG GR H + + + N+ ++G + +LG G P+ + L V +
Sbjct: 616 FISIAGHCEGR-HFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVY 674
Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNE 202
CG ++ ++ G ++L G Y +LGHG ++
Sbjct: 675 CGCSYSAAITC--GGNLLTWGRGTYARLGHGNSDD 707
Score = 63 (27.2 bits), Expect = 2.4e-29, Sum P(2) = 2.4e-29
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 59 RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
R V HC+A+ G + WGRN+ Q+
Sbjct: 827 RIVDVAVSVAHCLALSSSGEVFGWGRNDSQQI 858
Score = 53 (23.7 bits), Expect = 4.7e-14, Sum P(2) = 4.7e-14
Identities = 30/113 (26%), Positives = 44/113 (38%)
Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPL-MDLSGWNLRCMDSG 339
+NV PP I+ + C A QL L + D ++ P L W R D
Sbjct: 3986 SNVSPPPG-ITGEQPDLHCHAH--QLESTSTLLHE-DHTLFQAPHDAQLLQWLNRRPDDW 4041
Query: 340 NMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
+ G S+ WGH G+LG G G + P + L + + +A G
Sbjct: 4042 ALSW--GGASTIYGWGHNHRGQLG-GLEGSRIKT-PTPCEALSLLRPVQLAGG 4090
>UNIPROTKB|G3MX12 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0020037 "heme binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0046872 GO:GO:0008270
GO:GO:0020037 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 InterPro:IPR006624 SMART:SM00706
EMBL:DAAA02003804 EMBL:DAAA02003805 Ensembl:ENSBTAT00000063010
Uniprot:G3MX12
Length = 4757
Score = 320 (117.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 105/374 (28%), Positives = 170/374 (45%)
Query: 38 GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
G L G+ + P+ L +++ VA G S AV VEG+ Y G G+LG G
Sbjct: 2894 GGLKGSKIKVPSFSETLSALNVVQVAGGSKSLF--AVTVEGKVYACGEATNGRLGLGISS 2951
Query: 97 QR-DRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
P ++ LS Y +KK +G H +T DG ++G G+LG S N +P
Sbjct: 2952 GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKP 3011
Query: 154 SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
+ L ++ + ACG+ + L+S + GL +YG+LGHG D++ +L
Sbjct: 3012 RLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHG--------DNTTQL 3061
Query: 213 AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
+P+ + L G +++VACG+ T+A+ +G V++WG G +G+LG +
Sbjct: 3062 ------KPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 3115
Query: 271 VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKPLM 326
+P+ ++ V I G+ S G ++ WGK +G D KP +
Sbjct: 3116 IPQNIERLNGQGVCQ----IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQV 3171
Query: 327 --DLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
L G + + G +H D+ + +WG +G+ G G + P V LEG
Sbjct: 3172 VEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEG 3229
Query: 384 MHVISVACGYGHSL 397
+ VACG HS+
Sbjct: 3230 QKITRVACGSSHSV 3243
Score = 319 (117.4 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 83/253 (32%), Positives = 121/253 (47%)
Query: 34 GRRKGALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH 92
G R G VS PT L + V I+ VA HC+A+ EG Y+WG E G+LGH
Sbjct: 3937 GGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 3996
Query: 93 GDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE 152
G++ DRP ++ L ++ AG +H+ VT G+ +G ++G+LG ++++
Sbjct: 3997 GNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLK 4056
Query: 153 PSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVK 211
P V L V ACG+ L + ++ + G YG+LG G + K
Sbjct: 4057 PKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD-------GCK 4109
Query: 212 LAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV 271
+ P I +L G +VKV CG+ +VA+ G VYTWG G Y RLGH
Sbjct: 4110 V-------PMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR 4162
Query: 272 PRRVDVFQRNNVL 284
PR+V Q V+
Sbjct: 4163 PRQVQGLQGKKVI 4175
Score = 319 (117.4 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 97/331 (29%), Positives = 148/331 (44%)
Query: 77 GRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
G Y WG N RGQLG G K++ PT L+ + + G VT DG A
Sbjct: 3875 GTIYGWGHNHRGQLGGIEGAKVKV--PTPCEALAALRPVQLIGGEQTLFAVTADGKLYAT 3932
Query: 135 GWNKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
G+ G+LG G + P+ ++ + + A G + LSS EG + + G +
Sbjct: 3933 GYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAE 3990
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
G+LGHG + + RPR I +L G +V VA G H+ V + G +Y
Sbjct: 3991 DGKLGHGNRSPCD--------------RPRVIESLRGTEVVDVAAGGAHSACVTAAGDLY 4036
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG- 310
TWG G YGRLGH + +D+ P+ V+ Q + V+ + +G + C ++ WG
Sbjct: 4037 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--DVACGSGDAQTLCLTDDDTVWSWGD 4094
Query: 311 ----KLKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGY 364
KL G D P + L+G + ++ G+ S + +WG Y LG+
Sbjct: 4095 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4154
Query: 365 GPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
G P++V L+G VI++A G H
Sbjct: 4155 G--SDDHVRRPRQVQGLQGKKVIAIATGSLH 4183
Score = 293 (108.2 bits), Expect = 8.6e-24, P = 8.6e-24
Identities = 96/339 (28%), Positives = 152/339 (44%)
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
AV +G+ Y G G+LG G PT++ + IKK +G H + ++ +G
Sbjct: 3922 AVTADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 3981
Query: 130 NSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLV-SEVTATACGADFTVWLSSVEGASILNA 187
++G + G+LG G+ R+ + P + L +EV A G + +++ +
Sbjct: 3982 EVYSWGEAEDGKLGHGN-RSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAA--GDLYTW 4038
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGH DS E Q +P+ + AL G +V VACG+ T+ +
Sbjct: 4039 GKGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVVDVACGSGDAQTLCLT 4084
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG VP ++D V+ E GS S G
Sbjct: 4085 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC----GSQFSVALTKSGA 4140
Query: 306 LYMWGK-----LKNNGDDWMY-PKPLMDLSGWNLRCMDSGNMHHFV-GADSSCISWGHAQ 358
+Y WGK L + DD + P+ + L G + + +G++H D +WG
Sbjct: 4141 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDND 4200
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G V VACG H+L
Sbjct: 4201 EGQLGDGT--TNAIQRPRLVAALQGKKVNRVACGSAHTL 4237
Score = 283 (104.7 bits), Expect = 8.9e-22, P = 8.9e-22
Identities = 102/363 (28%), Positives = 158/363 (43%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
IR AAG S A + + + WG N++ QLG G KI+ P+ LS + +
Sbjct: 2865 IRKKAAGLES----AATIRTKVFVWGLNDKDQLGGLKGSKIKV--PSFSETLSALNVVQV 2918
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVSEVT---ATACGAD 171
G VT +G A G +G+LG G + P + L S V A G
Sbjct: 2919 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGR 2978
Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
L+ V+G + + G G+LGH ++ + +PR I AL + I
Sbjct: 2979 HATALT-VDG-KVFSWGEGDDGKLGH-----FSRMNCD---------KPRLIEALKTKRI 3022
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
+ACG++H+ A+ S G +YTWG G YGRLGH + + P+ V V + V+ ++
Sbjct: 3023 RDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VA 3078
Query: 292 AGSVNSSCTA--GGGQLYMWG-----KLKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHH 343
GS ++ A G ++ WG KL G + P+ + L+G + ++ G
Sbjct: 3079 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3138
Query: 344 FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
S + +WG Y LG+G P+ V+ L G ++ VA G H L + D
Sbjct: 3139 LALTKSGVVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDA 3196
Query: 403 TNV 405
V
Sbjct: 3197 GQV 3199
Score = 280 (103.6 bits), Expect = 3.7e-29, Sum P(2) = 3.7e-29
Identities = 65/238 (27%), Positives = 112/238 (47%)
Query: 29 CWDAVGRRKGA--LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNE 86
C +A R G G + P ++ L ++ VA H A+ V+G+ ++WG +
Sbjct: 2937 CGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGD 2996
Query: 87 RGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS 146
G+LGH ++ D+P ++ L +I+ G SH+ +T G +G ++G+LG G
Sbjct: 2997 DGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3056
Query: 147 IRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNT 205
+++P V+ L+ V ACG+ L+ + + + G +G+LG G N
Sbjct: 3057 NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI 3116
Query: 206 KDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
P+ I L G+ + ++ CG ++A+ G V+TWG G Y RLGH
Sbjct: 3117 --------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3160
Score = 280 (103.6 bits), Expect = 2.7e-21, P = 2.7e-21
Identities = 76/277 (27%), Positives = 128/277 (46%)
Query: 39 ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
A + + ++P ++ L +I +AA H +A+ G Y+WG + G+LGHGD +
Sbjct: 387 AYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 446
Query: 99 DRPTIVSELSKYKIKK----AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
+ P ++S S + K G +++ +T +G +G +G+LG GS +E P
Sbjct: 447 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 506
Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
V L +V ACG+ L+ E + + G YG+LG G + T
Sbjct: 507 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 558
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P+ I L +VKV CG+ +VA+ G VY+WG G RLGH ++ P+
Sbjct: 559 ------PKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 612
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
++ Q V+ ++AGS + +++ WG
Sbjct: 613 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 645
Score = 260 (96.6 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 78/262 (29%), Positives = 115/262 (43%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L G ++ VAAG H V G YTWG+ G+LGH D + +P +V
Sbjct: 4005 PRVIESLRGTEVVDVAAG--GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA 4062
Query: 107 LSKYKIKKA--GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EV 163
L +++ G+G + T+ +T+D ++G +G+LG G P + L V
Sbjct: 4063 LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGV 4122
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
CG+ F+V L+ GA + G Y +LGHG+D+ RPR +
Sbjct: 4123 VKVECGSQFSVALTK-SGA-VYTWGKGDYHRLGHGSDDHVR--------------RPRQV 4166
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR--- 280
L G+ ++ +A G+ H V G VYTWG G+LG PR V Q
Sbjct: 4167 QGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKV 4226
Query: 281 NNVLPPEAVISAGSVNSSCTAG 302
N V A A S + +AG
Sbjct: 4227 NRVACGSAHTLAWSTSKPASAG 4248
Score = 244 (91.0 bits), Expect = 8.5e-17, P = 8.5e-17
Identities = 79/285 (27%), Positives = 125/285 (43%)
Query: 129 GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
G+ +GW N GQLG P+P L + G + T++ + +G +
Sbjct: 3873 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADG-KLYA 3931
Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
G G+LG G +T P + ++ I KVA G H +A+
Sbjct: 3932 TGYGAGGRLGVGGTESVST--------------PTLLESIQHVFIKKVAVNSGGKHCLAL 3977
Query: 245 DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
S+G VY+WG G+LGH + PR ++ + V+ ++AG +S+C G
Sbjct: 3978 SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVD----VAAGGAHSACVTAAG 4033
Query: 305 QLYMWGKLK------NNGDDWMYPKPLMDLSGW---NLRCMDSGNMHHFVGADSSCI-SW 354
LY WGK + ++ +D + PK + L G ++ C SG+ D + SW
Sbjct: 4034 DLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVAC-GSGDAQTLCLTDDDTVWSW 4092
Query: 355 GHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G YG+LG G G +P K+D L G+ V+ V CG S+ +
Sbjct: 4093 GDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4135
Score = 243 (90.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 75/280 (26%), Positives = 130/280 (46%)
Query: 137 NKHGQLGSGSIRNE-IEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
+++G++ + + ++ + P V+ L S + A +D +L+ + + G G+
Sbjct: 378 SRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGR 437
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LGHG + ++ V A+ + AG+ +V +ACG+ ++ A+ ++G +YTWG
Sbjct: 438 LGHG--DTVPLEEPKVISAFSGKQ--------AGKHVVHIACGSTYSAAITAEGELYTWG 487
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG---- 310
G YGRLGH +DE +P V + V+ + +G + GQ++ WG
Sbjct: 488 RGNYGRLGHGSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWSWGDGDY 545
Query: 311 -KLKNNGDDWMY-PK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYG 365
KL G D PK L DL +RC ++ + D SWG LG+G
Sbjct: 546 GKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVA--LTKDGQVYSWGKGDNQRLGHG 603
Query: 366 PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
++ PK ++ L+G VI VA G H L + + + V
Sbjct: 604 T--EEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 641
Score = 229 (85.7 bits), Expect = 4.4e-15, P = 4.4e-15
Identities = 83/312 (26%), Positives = 136/312 (43%)
Query: 101 PTIVSELSKYKIKKAGAGRS--HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
P +V L+ I K A H + + G ++G G+LG G EP +
Sbjct: 395 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 454
Query: 159 LVSE-----VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
+ V ACG+ ++ +++ EG + G YG+LGHG+ ++D ++
Sbjct: 455 FSGKQAGKHVVHIACGSTYSAAITA-EG-ELYTWGRGNYGRLGHGS-----SEDEAI--- 504
Query: 214 YEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV 271
P +A L G ++ VACG+ T+AV G V++WG G YG+LG
Sbjct: 505 ------PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT 558
Query: 272 PRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN----NGDDW--MYPKPL 325
P+ ++ Q +V+ + GS S GQ+Y WGK N +G + YPK L
Sbjct: 559 PKLIEKLQDLDVVK----VRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLL 614
Query: 326 MDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGM 384
L G + + +G+ H + DS SWG + + + + P + L+
Sbjct: 615 EGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHFDTLRVTKPEPSALPGLDTK 672
Query: 385 HVISVACGYGHS 396
H++ +ACG S
Sbjct: 673 HIVGIACGPAQS 684
Score = 178 (67.7 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 56/164 (34%), Positives = 76/164 (46%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + V C S VA+ G YTWG+ + +LGHG
Sbjct: 4102 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4158
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSP 155
RP V L K+ G H V +EDG +G N GQLG G+ N I+ P
Sbjct: 4159 HVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTT-NAIQRPRL 4217
Query: 156 VRCLVSE-VTATACGADFTV-WLSSVEG-ASILNAGLP-QYGQL 195
V L + V ACG+ T+ W +S A L +P +Y L
Sbjct: 4218 VAALQGKKVNRVACGSAHTLAWSTSKPASAGKLPVQVPMEYNHL 4261
Score = 167 (63.8 bits), Expect = 3.7e-15, Sum P(2) = 3.7e-15
Identities = 38/120 (31%), Positives = 64/120 (53%)
Query: 65 CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVV 124
C + +A+ G +TWG+ + +LGHG + +P +V L KI G H +
Sbjct: 3133 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3192
Query: 125 VTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGAS 183
VT+ G A+G N HGQ G+G+ +P+ V+ L + +T ACG+ +V ++V+ A+
Sbjct: 3193 VTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVAT 3252
Score = 146 (56.5 bits), Expect = 7.7e-13, Sum P(2) = 7.7e-13
Identities = 51/200 (25%), Positives = 89/200 (44%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
+ P ++ L+G + VA G +A+ EG ++WG + G+LG G + P +
Sbjct: 3061 LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNI 3120
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L+ + + G ++ +T+ G +G + +LG GS + +P V L + +
Sbjct: 3121 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI 3180
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
A GA L+ + + G +GQ G+GT N K P +
Sbjct: 3181 VHVAVGALHC--LAVTDAGQVYAWGDNDHGQQGNGTTT-VNRK-------------PTLV 3224
Query: 224 AALAGETIVKVACGTNHTVA 243
L G+ I +VACG++H+VA
Sbjct: 3225 QGLEGQKITRVACGSSHSVA 3244
Score = 143 (55.4 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 43/147 (29%), Positives = 69/147 (46%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG +P + L +D+ V C S VA+ +G+ Y+WG+ + +LGHG +
Sbjct: 550 RGGSDG-CKTPKLIEKLQDLDV--VKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEE 606
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIR-NEIEPSP 155
P ++ L K+ AG +H + +TED ++G N Q ++R + EPS
Sbjct: 607 HVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-HFDTLRVTKPEPSA 665
Query: 156 VRCL-VSEVTATACG-ADFTVWLSSVE 180
+ L + ACG A W S E
Sbjct: 666 LPGLDTKHIVGIACGPAQSFAWSSCSE 692
Score = 132 (51.5 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 50/201 (24%), Positives = 89/201 (44%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L G+ + VA G +AV G+ ++WG + G+LG G P ++ +
Sbjct: 505 PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK 564
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTA 165
L + K G +V +T+DG ++G + +LG G+ + P + L + V
Sbjct: 565 LQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID 624
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
A G+ T L+ E + + + G Q H ++T +++ +P P A+
Sbjct: 625 VAAGS--THCLALTEDSEVHSWG--SNDQCQH-----FDT----LRVT---KPEPSALPG 668
Query: 226 LAGETIVKVACGTNHTVAVDS 246
L + IV +ACG + A S
Sbjct: 669 LDTKHIVGIACGPAQSFAWSS 689
Score = 120 (47.3 bits), Expect = 3.7e-29, Sum P(2) = 3.7e-29
Identities = 43/168 (25%), Positives = 73/168 (43%)
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
T++ G +Y WG G+LG E VP + L P +I + T
Sbjct: 3868 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA---ALRPVQLIGGEQTLFAVT 3924
Query: 301 AGGGQLYMWG-----KLKNNGDDWMYPKPLMD-LSGWNLR--CMDSGNMHHF-VGADSSC 351
A G +LY G +L G + + L++ + ++ ++SG H + ++
Sbjct: 3925 ADG-KLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 3983
Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
SWG A+ G+LG+G + P+ ++ L G V+ VA G HS +
Sbjct: 3984 YSWGEAEDGKLGHG--NRSPCDRPRVIESLRGTEVVDVAAGGAHSACV 4029
Score = 37 (18.1 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 264 REQKDEWVPRRVDVFQRNNVLPPEAVI-SAGSVNS 297
R + W +R ++ + + P AV SA S +S
Sbjct: 3382 RLSPNPWQEKRGEIISSEDAVTPSAVTPSACSASS 3416
>UNIPROTKB|E1B782 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0032183 "SUMO binding" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0020037 "heme
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005743
GO:GO:0046872 GO:GO:0008270 GO:GO:0006281 GO:GO:0007283
GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
Gene3D:2.30.30.30 InterPro:IPR021097 InterPro:IPR014722
Pfam:PF11515 SUPFAM:SSF56204 GeneTree:ENSGT00700000104208
OMA:QLAFTRD InterPro:IPR006624 SMART:SM00706 EMBL:DAAA02003804
EMBL:DAAA02003805 IPI:IPI00713038 Ensembl:ENSBTAT00000018496
Uniprot:E1B782
Length = 4847
Score = 320 (117.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 105/374 (28%), Positives = 170/374 (45%)
Query: 38 GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
G L G+ + P+ L +++ VA G S AV VEG+ Y G G+LG G
Sbjct: 2984 GGLKGSKIKVPSFSETLSALNVVQVAGGSKSLF--AVTVEGKVYACGEATNGRLGLGISS 3041
Query: 97 QR-DRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
P ++ LS Y +KK +G H +T DG ++G G+LG S N +P
Sbjct: 3042 GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKP 3101
Query: 154 SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
+ L ++ + ACG+ + L+S + GL +YG+LGHG D++ +L
Sbjct: 3102 RLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHG--------DNTTQL 3151
Query: 213 AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
+P+ + L G +++VACG+ T+A+ +G V++WG G +G+LG +
Sbjct: 3152 ------KPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 3205
Query: 271 VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKPLM 326
+P+ ++ V I G+ S G ++ WGK +G D KP +
Sbjct: 3206 IPQNIERLNGQGVCQ----IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQV 3261
Query: 327 --DLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
L G + + G +H D+ + +WG +G+ G G + P V LEG
Sbjct: 3262 VEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEG 3319
Query: 384 MHVISVACGYGHSL 397
+ VACG HS+
Sbjct: 3320 QKITRVACGSSHSV 3333
Score = 319 (117.4 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 83/253 (32%), Positives = 121/253 (47%)
Query: 34 GRRKGALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH 92
G R G VS PT L + V I+ VA HC+A+ EG Y+WG E G+LGH
Sbjct: 4027 GGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 4086
Query: 93 GDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE 152
G++ DRP ++ L ++ AG +H+ VT G+ +G ++G+LG ++++
Sbjct: 4087 GNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLK 4146
Query: 153 PSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVK 211
P V L V ACG+ L + ++ + G YG+LG G + K
Sbjct: 4147 PKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD-------GCK 4199
Query: 212 LAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV 271
+ P I +L G +VKV CG+ +VA+ G VYTWG G Y RLGH
Sbjct: 4200 V-------PMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR 4252
Query: 272 PRRVDVFQRNNVL 284
PR+V Q V+
Sbjct: 4253 PRQVQGLQGKKVI 4265
Score = 319 (117.4 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 97/331 (29%), Positives = 148/331 (44%)
Query: 77 GRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
G Y WG N RGQLG G K++ PT L+ + + G VT DG A
Sbjct: 3965 GTIYGWGHNHRGQLGGIEGAKVKV--PTPCEALAALRPVQLIGGEQTLFAVTADGKLYAT 4022
Query: 135 GWNKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
G+ G+LG G + P+ ++ + + A G + LSS EG + + G +
Sbjct: 4023 GYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAE 4080
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
G+LGHG + + RPR I +L G +V VA G H+ V + G +Y
Sbjct: 4081 DGKLGHGNRSPCD--------------RPRVIESLRGTEVVDVAAGGAHSACVTAAGDLY 4126
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG- 310
TWG G YGRLGH + +D+ P+ V+ Q + V+ + +G + C ++ WG
Sbjct: 4127 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--DVACGSGDAQTLCLTDDDTVWSWGD 4184
Query: 311 ----KLKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGY 364
KL G D P + L+G + ++ G+ S + +WG Y LG+
Sbjct: 4185 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4244
Query: 365 GPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
G P++V L+G VI++A G H
Sbjct: 4245 G--SDDHVRRPRQVQGLQGKKVIAIATGSLH 4273
Score = 293 (108.2 bits), Expect = 8.8e-24, P = 8.8e-24
Identities = 96/339 (28%), Positives = 152/339 (44%)
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
AV +G+ Y G G+LG G PT++ + IKK +G H + ++ +G
Sbjct: 4012 AVTADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4071
Query: 130 NSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLV-SEVTATACGADFTVWLSSVEGASILNA 187
++G + G+LG G+ R+ + P + L +EV A G + +++ +
Sbjct: 4072 EVYSWGEAEDGKLGHGN-RSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAA--GDLYTW 4128
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
G +YG+LGH DS E Q +P+ + AL G +V VACG+ T+ +
Sbjct: 4129 GKGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVVDVACGSGDAQTLCLT 4174
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
V++WG G YG+LG VP ++D V+ E GS S G
Sbjct: 4175 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC----GSQFSVALTKSGA 4230
Query: 306 LYMWGK-----LKNNGDDWMY-PKPLMDLSGWNLRCMDSGNMHHFV-GADSSCISWGHAQ 358
+Y WGK L + DD + P+ + L G + + +G++H D +WG
Sbjct: 4231 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDND 4290
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G V VACG H+L
Sbjct: 4291 EGQLGDGT--TNAIQRPRLVAALQGKKVNRVACGSAHTL 4327
Score = 283 (104.7 bits), Expect = 9.1e-22, P = 9.1e-22
Identities = 102/363 (28%), Positives = 158/363 (43%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
IR AAG S A + + + WG N++ QLG G KI+ P+ LS + +
Sbjct: 2955 IRKKAAGLES----AATIRTKVFVWGLNDKDQLGGLKGSKIKV--PSFSETLSALNVVQV 3008
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVSEVT---ATACGAD 171
G VT +G A G +G+LG G + P + L S V A G
Sbjct: 3009 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGR 3068
Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
L+ V+G + + G G+LGH ++ + +PR I AL + I
Sbjct: 3069 HATALT-VDG-KVFSWGEGDDGKLGH-----FSRMNCD---------KPRLIEALKTKRI 3112
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
+ACG++H+ A+ S G +YTWG G YGRLGH + + P+ V V + V+ ++
Sbjct: 3113 RDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VA 3168
Query: 292 AGSVNSSCTA--GGGQLYMWG-----KLKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHH 343
GS ++ A G ++ WG KL G + P+ + L+G + ++ G
Sbjct: 3169 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3228
Query: 344 FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
S + +WG Y LG+G P+ V+ L G ++ VA G H L + D
Sbjct: 3229 LALTKSGVVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDA 3286
Query: 403 TNV 405
V
Sbjct: 3287 GQV 3289
Score = 280 (103.6 bits), Expect = 3.8e-29, Sum P(2) = 3.8e-29
Identities = 65/238 (27%), Positives = 112/238 (47%)
Query: 29 CWDAVGRRKGA--LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNE 86
C +A R G G + P ++ L ++ VA H A+ V+G+ ++WG +
Sbjct: 3027 CGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGD 3086
Query: 87 RGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS 146
G+LGH ++ D+P ++ L +I+ G SH+ +T G +G ++G+LG G
Sbjct: 3087 DGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3146
Query: 147 IRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNT 205
+++P V+ L+ V ACG+ L+ + + + G +G+LG G N
Sbjct: 3147 NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI 3206
Query: 206 KDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
P+ I L G+ + ++ CG ++A+ G V+TWG G Y RLGH
Sbjct: 3207 --------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3250
Score = 280 (103.6 bits), Expect = 2.7e-21, P = 2.7e-21
Identities = 76/277 (27%), Positives = 128/277 (46%)
Query: 39 ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
A + + ++P ++ L +I +AA H +A+ G Y+WG + G+LGHGD +
Sbjct: 477 AYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 536
Query: 99 DRPTIVSELSKYKIKK----AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
+ P ++S S + K G +++ +T +G +G +G+LG GS +E P
Sbjct: 537 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 596
Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
V L +V ACG+ L+ E + + G YG+LG G + T
Sbjct: 597 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 648
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P+ I L +VKV CG+ +VA+ G VY+WG G RLGH ++ P+
Sbjct: 649 ------PKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 702
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
++ Q V+ ++AGS + +++ WG
Sbjct: 703 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 735
Score = 260 (96.6 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 78/262 (29%), Positives = 115/262 (43%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L G ++ VAAG H V G YTWG+ G+LGH D + +P +V
Sbjct: 4095 PRVIESLRGTEVVDVAAG--GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA 4152
Query: 107 LSKYKIKKA--GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EV 163
L +++ G+G + T+ +T+D ++G +G+LG G P + L V
Sbjct: 4153 LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGV 4212
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
CG+ F+V L+ GA + G Y +LGHG+D+ RPR +
Sbjct: 4213 VKVECGSQFSVALTK-SGA-VYTWGKGDYHRLGHGSDDHVR--------------RPRQV 4256
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR--- 280
L G+ ++ +A G+ H V G VYTWG G+LG PR V Q
Sbjct: 4257 QGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKV 4316
Query: 281 NNVLPPEAVISAGSVNSSCTAG 302
N V A A S + +AG
Sbjct: 4317 NRVACGSAHTLAWSTSKPASAG 4338
Score = 244 (91.0 bits), Expect = 8.6e-17, P = 8.6e-17
Identities = 79/285 (27%), Positives = 125/285 (43%)
Query: 129 GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
G+ +GW N GQLG P+P L + G + T++ + +G +
Sbjct: 3963 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADG-KLYA 4021
Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
G G+LG G +T P + ++ I KVA G H +A+
Sbjct: 4022 TGYGAGGRLGVGGTESVST--------------PTLLESIQHVFIKKVAVNSGGKHCLAL 4067
Query: 245 DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
S+G VY+WG G+LGH + PR ++ + V+ ++AG +S+C G
Sbjct: 4068 SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVD----VAAGGAHSACVTAAG 4123
Query: 305 QLYMWGKLK------NNGDDWMYPKPLMDLSGW---NLRCMDSGNMHHFVGADSSCI-SW 354
LY WGK + ++ +D + PK + L G ++ C SG+ D + SW
Sbjct: 4124 DLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVAC-GSGDAQTLCLTDDDTVWSW 4182
Query: 355 GHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G YG+LG G G +P K+D L G+ V+ V CG S+ +
Sbjct: 4183 GDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4225
Score = 243 (90.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 75/280 (26%), Positives = 130/280 (46%)
Query: 137 NKHGQLGSGSIRNE-IEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
+++G++ + + ++ + P V+ L S + A +D +L+ + + G G+
Sbjct: 468 SRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGR 527
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LGHG + ++ V A+ + AG+ +V +ACG+ ++ A+ ++G +YTWG
Sbjct: 528 LGHG--DTVPLEEPKVISAFSGKQ--------AGKHVVHIACGSTYSAAITAEGELYTWG 577
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG---- 310
G YGRLGH +DE +P V + V+ + +G + GQ++ WG
Sbjct: 578 RGNYGRLGHGSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWSWGDGDY 635
Query: 311 -KLKNNGDDWMY-PK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYG 365
KL G D PK L DL +RC ++ + D SWG LG+G
Sbjct: 636 GKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVA--LTKDGQVYSWGKGDNQRLGHG 693
Query: 366 PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
++ PK ++ L+G VI VA G H L + + + V
Sbjct: 694 T--EEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 731
Score = 229 (85.7 bits), Expect = 4.5e-15, P = 4.5e-15
Identities = 83/312 (26%), Positives = 136/312 (43%)
Query: 101 PTIVSELSKYKIKKAGAGRS--HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
P +V L+ I K A H + + G ++G G+LG G EP +
Sbjct: 485 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 544
Query: 159 LVSE-----VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
+ V ACG+ ++ +++ EG + G YG+LGHG+ ++D ++
Sbjct: 545 FSGKQAGKHVVHIACGSTYSAAITA-EG-ELYTWGRGNYGRLGHGS-----SEDEAI--- 594
Query: 214 YEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV 271
P +A L G ++ VACG+ T+AV G V++WG G YG+LG
Sbjct: 595 ------PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT 648
Query: 272 PRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN----NGDDW--MYPKPL 325
P+ ++ Q +V+ + GS S GQ+Y WGK N +G + YPK L
Sbjct: 649 PKLIEKLQDLDVVK----VRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLL 704
Query: 326 MDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGM 384
L G + + +G+ H + DS SWG + + + + P + L+
Sbjct: 705 EGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHFDTLRVTKPEPSALPGLDTK 762
Query: 385 HVISVACGYGHS 396
H++ +ACG S
Sbjct: 763 HIVGIACGPAQS 774
Score = 178 (67.7 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 56/164 (34%), Positives = 76/164 (46%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + V C S VA+ G YTWG+ + +LGHG
Sbjct: 4192 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4248
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSP 155
RP V L K+ G H V +EDG +G N GQLG G+ N I+ P
Sbjct: 4249 HVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTT-NAIQRPRL 4307
Query: 156 VRCLVSE-VTATACGADFTV-WLSSVEG-ASILNAGLP-QYGQL 195
V L + V ACG+ T+ W +S A L +P +Y L
Sbjct: 4308 VAALQGKKVNRVACGSAHTLAWSTSKPASAGKLPVQVPMEYNHL 4351
Score = 167 (63.8 bits), Expect = 3.8e-15, Sum P(2) = 3.8e-15
Identities = 38/120 (31%), Positives = 64/120 (53%)
Query: 65 CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVV 124
C + +A+ G +TWG+ + +LGHG + +P +V L KI G H +
Sbjct: 3223 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3282
Query: 125 VTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGAS 183
VT+ G A+G N HGQ G+G+ +P+ V+ L + +T ACG+ +V ++V+ A+
Sbjct: 3283 VTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVAT 3342
Score = 146 (56.5 bits), Expect = 8.0e-13, Sum P(2) = 8.0e-13
Identities = 51/200 (25%), Positives = 89/200 (44%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
+ P ++ L+G + VA G +A+ EG ++WG + G+LG G + P +
Sbjct: 3151 LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNI 3210
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
L+ + + G ++ +T+ G +G + +LG GS + +P V L + +
Sbjct: 3211 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI 3270
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
A GA L+ + + G +GQ G+GT N K P +
Sbjct: 3271 VHVAVGALHC--LAVTDAGQVYAWGDNDHGQQGNGTTT-VNRK-------------PTLV 3314
Query: 224 AALAGETIVKVACGTNHTVA 243
L G+ I +VACG++H+VA
Sbjct: 3315 QGLEGQKITRVACGSSHSVA 3334
Score = 143 (55.4 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 43/147 (29%), Positives = 69/147 (46%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG +P + L +D+ V C S VA+ +G+ Y+WG+ + +LGHG +
Sbjct: 640 RGGSDG-CKTPKLIEKLQDLDV--VKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEE 696
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIR-NEIEPSP 155
P ++ L K+ AG +H + +TED ++G N Q ++R + EPS
Sbjct: 697 HVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-HFDTLRVTKPEPSA 755
Query: 156 VRCL-VSEVTATACG-ADFTVWLSSVE 180
+ L + ACG A W S E
Sbjct: 756 LPGLDTKHIVGIACGPAQSFAWSSCSE 782
Score = 132 (51.5 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 50/201 (24%), Positives = 89/201 (44%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L G+ + VA G +AV G+ ++WG + G+LG G P ++ +
Sbjct: 595 PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK 654
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTA 165
L + K G +V +T+DG ++G + +LG G+ + P + L + V
Sbjct: 655 LQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID 714
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
A G+ T L+ E + + + G Q H ++T +++ +P P A+
Sbjct: 715 VAAGS--THCLALTEDSEVHSWG--SNDQCQH-----FDT----LRVT---KPEPSALPG 758
Query: 226 LAGETIVKVACGTNHTVAVDS 246
L + IV +ACG + A S
Sbjct: 759 LDTKHIVGIACGPAQSFAWSS 779
Score = 120 (47.3 bits), Expect = 3.8e-29, Sum P(2) = 3.8e-29
Identities = 43/168 (25%), Positives = 73/168 (43%)
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
T++ G +Y WG G+LG E VP + L P +I + T
Sbjct: 3958 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA---ALRPVQLIGGEQTLFAVT 4014
Query: 301 AGGGQLYMWG-----KLKNNGDDWMYPKPLMD-LSGWNLR--CMDSGNMHHF-VGADSSC 351
A G +LY G +L G + + L++ + ++ ++SG H + ++
Sbjct: 4015 ADG-KLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4073
Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
SWG A+ G+LG+G + P+ ++ L G V+ VA G HS +
Sbjct: 4074 YSWGEAEDGKLGHG--NRSPCDRPRVIESLRGTEVVDVAAGGAHSACV 4119
Score = 37 (18.1 bits), Expect = 1.8e-20, Sum P(2) = 1.8e-20
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 264 REQKDEWVPRRVDVFQRNNVLPPEAVI-SAGSVNS 297
R + W +R ++ + + P AV SA S +S
Sbjct: 3472 RLSPNPWQEKRGEIISSEDAVTPSAVTPSACSASS 3506
>UNIPROTKB|O95199 [details] [associations]
symbol:RCBTB2 "RCC1 and BTB domain-containing protein 2"
species:9606 "Homo sapiens" [GO:0005087 "Ran guanyl-nucleotide
exchange factor activity" evidence=TAS] InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CH471075 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
HOVERGEN:HBG053261 KO:K11494 EMBL:AF060219 EMBL:AY341245
EMBL:AK315703 EMBL:AL157813 EMBL:BC029052 IPI:IPI00658195
IPI:IPI00941277 PIR:T50663 RefSeq:NP_001259.1 UniGene:Hs.652712
ProteinModelPortal:O95199 SMR:O95199 IntAct:O95199
MINT:MINT-1481780 STRING:O95199 PhosphoSite:O95199 PRIDE:O95199
DNASU:1102 Ensembl:ENST00000344532 GeneID:1102 KEGG:hsa:1102
UCSC:uc001vch.3 CTD:1102 GeneCards:GC13M049063 HGNC:HGNC:1914
HPA:HPA040242 MIM:603524 neXtProt:NX_O95199 PharmGKB:PA26450
InParanoid:O95199 OrthoDB:EOG4M91R6 PhylomeDB:O95199 ChiTaRS:RCBTB2
GenomeRNAi:1102 NextBio:4558 ArrayExpress:O95199 Bgee:O95199
CleanEx:HS_RCBTB2 Genevestigator:O95199 GermOnline:ENSG00000136161
Uniprot:O95199
Length = 551
Score = 326 (119.8 bits), Expect = 6.9e-29, P = 6.9e-29
Identities = 91/272 (33%), Positives = 133/272 (48%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
+ P RL L G I ++ G H V EG +TWG N QLG+G P +
Sbjct: 87 IEPRRLDSLNGKKIACLSYGS-GPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHI 145
Query: 105 S-ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR-CLVSE 162
S LS ++ + G H++V+T DG A+G+N GQ+GSGS N+ P V CL ++
Sbjct: 146 STNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNK 205
Query: 163 VTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
V T ACG ++ V+ + G GQLG G N N QP P
Sbjct: 206 VVVTIACGQ--MCCMAVVDTGEVYVWGYNGNGQLGLG--NSGN------------QPTPC 249
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
+AAL G + +VACG HT+ + +G VY WG YG+LG + ++ P V V +++
Sbjct: 250 RVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTV-EKD 308
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
++ A S + S+ GG +YMWG+ +
Sbjct: 309 RIIEIAACHSTHT--SAAKTQGGHVYMWGQCR 338
Score = 228 (85.3 bits), Expect = 3.1e-16, P = 3.1e-16
Identities = 80/308 (25%), Positives = 140/308 (45%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
++ SE I++A G+ + + T + G N G LG G +++ IEP +
Sbjct: 35 SLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDS 94
Query: 159 LVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L + + + G+ + L++ EG + G Y QLG+GT N L
Sbjct: 95 LNGKKIACLSYGSGPHIVLATTEG-EVFTWGHNAYSQLGNGTTNH--------GLV---- 141
Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P I+ L+ + +++VACG+ H++ + S G V+ WG+ G++G ++ +PRRV
Sbjct: 142 --PCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVT 199
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSG 330
+N V+ I+ G + G++Y+WG N G+ P P + L G
Sbjct: 200 GCLQNKVV---VTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQG 256
Query: 331 WNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
++ + G H V D + +WG YG+LG G + + + P V + E +I +
Sbjct: 257 IRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG--NKSNQSYPTPVTV-EKDRIIEI 313
Query: 390 A-CGYGHS 396
A C H+
Sbjct: 314 AACHSTHT 321
Score = 208 (78.3 bits), Expect = 6.0e-14, P = 6.0e-14
Identities = 75/261 (28%), Positives = 114/261 (43%)
Query: 75 VEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS-HTVVVTEDGNSLA 133
V + G N G LG GD P + L+ KI G H V+ T +G
Sbjct: 63 VNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFT 122
Query: 134 FGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASILNAGLPQ 191
+G N + QLG+G+ + + P + +S +V ACG+ ++ L+S +G + G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTS-DG-EVFAWGYNN 180
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYV 250
GQ+G G S+V QP PR + L + +V +ACG +AV G V
Sbjct: 181 SGQVGSG---------STVN-----QPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEV 226
Query: 251 YTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
Y WG+ G G+LG ++ P RV Q V ++ G ++ GQ+Y WG
Sbjct: 227 YVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQR----VACGYAHTLVLTDEGQVYAWG 282
Query: 311 -----KL-KNNGDDWMYPKPL 325
+L N + YP P+
Sbjct: 283 ANSYGQLGTGNKSNQSYPTPV 303
Score = 177 (67.4 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 54/196 (27%), Positives = 90/196 (45%)
Query: 220 PRAIAALAGETIVKVACGTN-HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
PR + +L G+ I ++ G+ H V ++G V+TWG Y +LG+ VP +
Sbjct: 89 PRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 148
Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGD-------DWMYPKPLMD-LSG 330
N + ++ GS +S G+++ WG N+G + P+ + L
Sbjct: 149 LSNKQV---IEVACGSYHSLVLTSDGEVFAWG-YNNSGQVGSGSTVNQPIPRRVTGCLQN 204
Query: 331 WNLRCMDSGNMHHFVGADSSCIS-WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
+ + G M D+ + WG+ G+LG G G + + P +V L+G+ V V
Sbjct: 205 KVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPT--PCRVAALQGIRVQRV 262
Query: 390 ACGYGHSLVIVDRTNV 405
ACGY H+LV+ D V
Sbjct: 263 ACGYAHTLVLTDEGQV 278
Score = 128 (50.1 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 33/101 (32%), Positives = 49/101 (48%)
Query: 42 GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP 101
GN +P R+ L G+ ++ VA G H + + EG+ Y WG N GQLG G+K + P
Sbjct: 243 GNQPTPCRVAALQGIRVQRVACGYA--HTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 300
Query: 102 TIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK-HGQ 141
T V+ I+ A +HT G + + W + GQ
Sbjct: 301 TPVTVEKDRIIEIAACHSTHTSAAKTQGGHV-YMWGQCRGQ 340
>MGI|MGI:1917200 [details] [associations]
symbol:Rcbtb2 "regulator of chromosome condensation (RCC1)
and BTB (POZ) domain containing protein 2" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651
PROSITE:PS50097 SMART:SM00225 MGI:MGI:1917200 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104208 HOGENOM:HOG000065752
HOVERGEN:HBG053261 KO:K11494 CTD:1102 OrthoDB:EOG4M91R6
ChiTaRS:RCBTB2 EMBL:AK031242 EMBL:AK031248 EMBL:AK160881
EMBL:BC003224 IPI:IPI00308981 IPI:IPI00661148 RefSeq:NP_001164165.1
RefSeq:NP_598844.3 UniGene:Mm.280068 ProteinModelPortal:Q99LJ7
SMR:Q99LJ7 STRING:Q99LJ7 PhosphoSite:Q99LJ7 PaxDb:Q99LJ7
PRIDE:Q99LJ7 Ensembl:ENSMUST00000022702 Ensembl:ENSMUST00000110952
Ensembl:ENSMUST00000164822 Ensembl:ENSMUST00000169479
Ensembl:ENSMUST00000169513 Ensembl:ENSMUST00000170677 GeneID:105670
KEGG:mmu:105670 UCSC:uc007upj.2 UCSC:uc007upm.2 InParanoid:Q99LJ7
OMA:QMCSMAV NextBio:357822 Bgee:Q99LJ7 Genevestigator:Q99LJ7
GermOnline:ENSMUSG00000022106 Uniprot:Q99LJ7
Length = 551
Score = 324 (119.1 bits), Expect = 1.1e-28, P = 1.1e-28
Identities = 87/272 (31%), Positives = 133/272 (48%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
+ P RL L G I ++ G H V +G +TWG N QLG+G P +
Sbjct: 87 IEPRRLDSLTGKKIASLSYGS-GPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHI 145
Query: 105 S-ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR-CLVSE 162
S LS ++ + G H++V+T DG A+G+N GQ+GSGS N+ P V CL ++
Sbjct: 146 STNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNK 205
Query: 163 VTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
V ACG + ++ V+ + G GQLG G+ QP P
Sbjct: 206 VVMNIACGQMCS--MAVVDTGEVYVWGYNGNGQLGLGSSGN--------------QPTPC 249
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
+AAL G + +VACG HT+ + +G +Y WG YG+LG + ++ P V V +++
Sbjct: 250 RVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPV-VVEKD 308
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
++ A SA + S+ GG +YMWG+ +
Sbjct: 309 RIIEIAACHSAHT--SAAKTQGGHVYMWGQCR 338
Score = 238 (88.8 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 82/308 (26%), Positives = 142/308 (46%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
++ SE I++A G+ + + T + G N G LG G I++ IEP +
Sbjct: 35 SLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTIEPRRLDS 94
Query: 159 LVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L + + + + G+ + L++ +G + G Y QLG+GT N L
Sbjct: 95 LTGKKIASLSYGSGPHIVLATTDG-EVFTWGHNAYSQLGNGTTNH--------GLV---- 141
Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P I+ L+ + +++VACG+ H++ + S G V+ WG+ G++G ++ +PRRV
Sbjct: 142 --PCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVT 199
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSG 330
+N V+ I+ G + S G++Y+WG N G P P + L G
Sbjct: 200 GCLQNKVVMN---IACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQG 256
Query: 331 WNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
++ + G H V D I +WG YG+LG G + + + P V ++E +I +
Sbjct: 257 IRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTG--NKSNQSYPTPV-VVEKDRIIEI 313
Query: 390 A-CGYGHS 396
A C H+
Sbjct: 314 AACHSAHT 321
Score = 215 (80.7 bits), Expect = 9.5e-15, P = 9.5e-15
Identities = 74/262 (28%), Positives = 116/262 (44%)
Query: 75 VEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS-HTVVVTEDGNSLA 133
V + G N G LG GD P + L+ KI G H V+ T DG
Sbjct: 63 VNDEIFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFT 122
Query: 134 FGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASILNAGLPQ 191
+G N + QLG+G+ + + P + +S +V ACG+ ++ L+S +G + G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTS-DG-EVFAWGYNN 180
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYV 250
GQ+G G+ T + QP PR + L + ++ +ACG ++AV G V
Sbjct: 181 SGQVGSGS-----TAN---------QPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEV 226
Query: 251 YTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
Y WG+ G G+LG ++ P RV Q V ++ G ++ GQ+Y WG
Sbjct: 227 YVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQR----VACGYAHTLVLTDEGQIYAWG 282
Query: 311 -----KL-KNNGDDWMYPKPLM 326
+L N + YP P++
Sbjct: 283 ANSYGQLGTGNKSNQSYPTPVV 304
Score = 187 (70.9 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 55/198 (27%), Positives = 89/198 (44%)
Query: 220 PRAIAALAGETIVKVACGTN-HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
PR + +L G+ I ++ G+ H V + G V+TWG Y +LG+ VP +
Sbjct: 89 PRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 148
Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN----NGDDWMYPKP------LMDL 328
N + ++ GS +S G+++ WG + +G P P L +
Sbjct: 149 LSNKQV---IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNK 205
Query: 329 SGWNLRCMDSGNMHHFVGADSSCIS-WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
N+ C G M D+ + WG+ G+LG G G + + P +V L+G+ V
Sbjct: 206 VVMNIAC---GQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPT--PCRVAALQGIRVQ 260
Query: 388 SVACGYGHSLVIVDRTNV 405
VACGY H+LV+ D +
Sbjct: 261 RVACGYAHTLVLTDEGQI 278
Score = 130 (50.8 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 48/143 (33%), Positives = 66/143 (46%)
Query: 42 GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP 101
GN +P R+ L G+ ++ VA G H + + EG+ Y WG N GQLG G+K + P
Sbjct: 243 GNQPTPCRVAALQGIRVQRVACGYA--HTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYP 300
Query: 102 T-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR-CL 159
T +V E + I+ A +HT G + + W GQ S+ I P C
Sbjct: 301 TPVVVEKDRI-IEIAACHSAHTSAAKTQGGHV-YMW---GQCRGQSV---ILPHHTHFCC 352
Query: 160 VSEVTATACGADFTV-W-LSSVE 180
+V A C A V W L SVE
Sbjct: 353 TDDVFA--CFATPAVTWRLLSVE 373
>UNIPROTKB|E1BVG2 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104208 OMA:NCSNCLG EMBL:AADN02005390
IPI:IPI00590638 Ensembl:ENSGALT00000027473 Uniprot:E1BVG2
Length = 531
Score = 302 (111.4 bits), Expect = 2.7e-26, P = 2.7e-26
Identities = 85/272 (31%), Positives = 132/272 (48%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-I 103
+ P +L L G I ++ G H + +G Y WG N QLG+G Q P +
Sbjct: 63 IVPKKLEALCGKKISSLSYGS-GPHVLLCTEDGEVYAWGHNGYSQLGNGATNQGVTPVQV 121
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCLVSE 162
+ L K+ + G H++ ++ DG+ A+G+N GQ+GSGS N+ P V CL +
Sbjct: 122 CTNLLLKKVIEVACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTANQPTPRRVSNCLQDK 181
Query: 163 -VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
V ACG T ++ V + G GQLG G N N Q P
Sbjct: 182 MVVGIACGQ--TSSMAVVNNGEVYGWGYNGNGQLGLG--NNGN------------QLTPC 225
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
+AAL G I+++ACG HT+A+ +G +Y WG YG+LG + ++ P ++ + ++
Sbjct: 226 RVAALHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNQLSPLQI-MMEKE 284
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
V+ A SA + S+ GQ+YMWG+ +
Sbjct: 285 RVVEIAACHSAHT--SAAKTQSGQVYMWGQCR 314
Score = 217 (81.4 bits), Expect = 5.2e-15, P = 5.2e-15
Identities = 77/308 (25%), Positives = 138/308 (44%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
T++S I+KA G + + T + FG N LG+G ++ I P +
Sbjct: 11 TLLSPQEIASIRKACVFGTSANEAIYTTHNDEVFVFGLNCSNCLGTGDSQSTIVPKKLEA 70
Query: 159 LVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L + +++ + G+ V L + +G + G Y QLG+G N+ T V++
Sbjct: 71 LCGKKISSLSYGSGPHVLLCTEDG-EVYAWGHNGYSQLGNGATNQGVTP---VQVCTN-- 124
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
L + +++VACG++H++A+ G +Y WG+ G++G ++ PRRV
Sbjct: 125 --------LLLKKVIEVACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTANQPTPRRVSN 176
Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLSG 330
++ ++ I+ G +S G++Y WG L NNG+ + P + L G
Sbjct: 177 CLQDKMV---VGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQ-LTPCRVAALHG 232
Query: 331 WNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
+ + G H D + +WG YG+LG G KS+ + ++E V+ +
Sbjct: 233 VCILQIACGYAHTLALTDEGLLYAWGANTYGQLGTG---NKSNQLSPLQIMMEKERVVEI 289
Query: 390 A-CGYGHS 396
A C H+
Sbjct: 290 AACHSAHT 297
Score = 184 (69.8 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 54/193 (27%), Positives = 85/193 (44%)
Query: 220 PRAIAALAGETIVKVACGTN-HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
P+ + AL G+ I ++ G+ H + G VY WG GY +LG+ P +V
Sbjct: 65 PKKLEALCGKKISSLSYGSGPHVLLCTEDGEVYAWGHNGYSQLGNGATNQGVTPVQVCT- 123
Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK----NNGDDWMYPKP------LMDL 328
N +L ++ GS +S + G LY WG +G P P L D
Sbjct: 124 --NLLLKKVIEVACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTANQPTPRRVSNCLQDK 181
Query: 329 SGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVIS 388
+ C + +M V + WG+ G+LG G G + + P +V L G+ ++
Sbjct: 182 MVVGIACGQTSSMA--VVNNGEVYGWGYNGNGQLGLGNNGNQLT--PCRVAALHGVCILQ 237
Query: 389 VACGYGHSLVIVD 401
+ACGY H+L + D
Sbjct: 238 IACGYAHTLALTD 250
Score = 150 (57.9 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 41/132 (31%), Positives = 62/132 (46%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
N +P R+ + D V C +AV G Y WG N GQLG G+ + P
Sbjct: 167 NQPTPRRVSNCLQ-DKMVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQLTPC 225
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE 162
V+ L I + G +HT+ +T++G A+G N +GQLG+G+ N++ P +
Sbjct: 226 RVAALHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNQLSPLQIMMEKER 285
Query: 163 VTA-TACGADFT 173
V AC + T
Sbjct: 286 VVEIAACHSAHT 297
Score = 116 (45.9 bits), Expect = 0.00099, P = 0.00099
Identities = 31/96 (32%), Positives = 47/96 (48%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
+GN ++P R+ L GV I +A G H +A+ EG Y WG N GQLG G+K +
Sbjct: 218 NGNQLTPCRVAALHGVCILQIACGYA--HTLALTDEGLLYAWGANTYGQLGTGNKSNQLS 275
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVV-TEDGNSLAFG 135
P + + ++ A +HT T+ G +G
Sbjct: 276 PLQIMMEKERVVEIAACHSAHTSAAKTQSGQVYMWG 311
>UNIPROTKB|F1MNS0 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR017986 InterPro:IPR000569 InterPro:IPR001680
InterPro:IPR003877 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016567
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 SUPFAM:SSF56204
OMA:HHYQDGI GeneTree:ENSGT00700000104312 EMBL:DAAA02028744
EMBL:DAAA02028745 EMBL:DAAA02028746 IPI:IPI00924381
Ensembl:ENSBTAT00000061038 ArrayExpress:F1MNS0 Uniprot:F1MNS0
Length = 4857
Score = 265 (98.3 bits), Expect = 2.7e-19, P = 2.7e-19
Identities = 95/331 (28%), Positives = 153/331 (46%)
Query: 22 LLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSC-HCVAVDVEGRCY 80
+L CG + +G+ G D +L T + L G + + C S H +A+ G +
Sbjct: 4043 VLACGEGSYGRLGQ--GNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4099
Query: 81 TWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
+WG + G+LGHG+ ++ RP + L ++ + G H+ VVT DG FG +G
Sbjct: 4100 SWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYG 4159
Query: 141 QLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
+LG G+ N+ P V L ++ ACG + T+ +S+ +G+ + G YG+LG G
Sbjct: 4160 RLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSMVWAFGDGDYGKLGLGN 4218
Query: 200 DNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG----F 255
+T SS P+ + L G I KVACGT +VA+ G+VYT+G
Sbjct: 4219 ----STAKSS----------PQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLI 4264
Query: 256 G-GYGRLGHREQKDEWVPRRVDVFQRNNVLPPE---AVISAGSVNSSCTAGGGQLYMWGK 311
G GR + + +P V + + E A+ S G V + + GQL + G
Sbjct: 4265 GLPEGR-ARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL-GH 4322
Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
+ + P + L G N+R + +G H
Sbjct: 4323 TNHVRE----PTLVTVLQGKNVRQISAGRCH 4349
Score = 251 (93.4 bits), Expect = 7.5e-26, Sum P(2) = 7.5e-26
Identities = 81/277 (29%), Positives = 134/277 (48%)
Query: 134 FGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
+G +HGQL RN + P+ S+ CG + T + + ++L G YG
Sbjct: 3997 WGAGRHGQLAEAG-RNVMVPAAAPSF-SQAQQVICGQNCTFVIQA--NGTVLACGEGSYG 4052
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV--ACGTN-HTVAVDSKGYV 250
+LG G N+ D V I+AL G + ++ +CG++ H++A+ G V
Sbjct: 4053 RLGQG-----NSDDLHVLTV---------ISALQGFVVTQLVTSCGSDGHSMALTESGEV 4098
Query: 251 YTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM-- 308
++WG G YG+LGH + PR+++ Q V+ +S G +S+ G+L+
Sbjct: 4099 FSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQ----MSCGFKHSAVVTSDGKLFTFG 4154
Query: 309 ---WGKLK-NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGEL 362
+G+L N + P+ + L G+ + + G H V AD S + ++G YG+L
Sbjct: 4155 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKL 4214
Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G G KSS P+KVD+L G+ + VACG S+ +
Sbjct: 4215 GLGNSTAKSS--PQKVDVLCGIGIKKVACGTQFSVAL 4249
Score = 249 (92.7 bits), Expect = 2.3e-17, P = 2.3e-17
Identities = 87/365 (23%), Positives = 153/365 (41%)
Query: 44 LVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD---R 100
++ P +L P D + + AG C V + +G G+ G+LG GD + +
Sbjct: 393 ILQP-KLAPSFS-DAQTIEAGQY-CTFV-ISTDGSVRACGKGSYGRLGLGDSNNQSTLKK 448
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
T S K+ + HT+ T +G ++G +G+LG G+ + P ++ +
Sbjct: 449 LTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPL 508
Query: 161 SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
A + + E + G +G+LGHG N N P
Sbjct: 509 QGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNI--------------P 554
Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG--YGRLGHREQKDEWVPRRVDVF 278
+ ++ + +V+CG++HT+A+ G W FGG G+LGH + + P+ ++
Sbjct: 555 TLVKDISN--VGEVSCGSSHTIALSKDGRT-VWSFGGGDNGKLGHGDTNRVYKPKVIEAL 611
Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG--KLKNNGDDW---MYPKPLMDLSGWNL 333
Q + + AGS +S GQ+Y WG G + PK + +L+ +
Sbjct: 612 QGMFIRK----VCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEELAATRI 667
Query: 334 RCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
+ G+ H + D+ +WG+ G+ G G PKKV L+G+ + ++ G
Sbjct: 668 VDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN-STGPITKPKKVSGLDGIAIQQISAG 726
Query: 393 YGHSL 397
HSL
Sbjct: 727 TSHSL 731
Score = 249 (92.7 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 95/352 (26%), Positives = 155/352 (44%)
Query: 60 FVAAGCVSC--HCV-AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK-- 114
F A V C +C + G G G+LG G+ T++S L + + +
Sbjct: 4021 FSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLV 4080
Query: 115 AGAGRS-HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADF 172
G H++ +TE G ++G +G+LG G+ + P + L E V +CG
Sbjct: 4081 TSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKH 4140
Query: 173 TVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIV 232
+ ++S +G + G YG+LG G NT S+ KL P + AL G I
Sbjct: 4141 SAVVTS-DG-KLFTFGNGDYGRLGLG-----NT--SNKKL-------PERVTALEGYQIG 4184
Query: 233 KVACGTNHTVAVDSKG-YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
+VACG NHT+AV + G V+ +G G YG+LG + P++VDV + ++
Sbjct: 4185 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKK----VA 4240
Query: 292 AGSVNSSCTAGGGQLYMWG--KL----KNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV 345
G+ S G +Y +G +L + + P+ + L+G + + G H
Sbjct: 4241 CGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLA 4300
Query: 346 GADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
A + + +WG G+LG G P V +L+G +V ++ G HS
Sbjct: 4301 LASTGDVYAWGSNSEGQLGLGHTNHVRE--PTLVTVLQGKNVRQISAGRCHS 4350
Score = 241 (89.9 bits), Expect = 2.5e-15, Sum P(2) = 2.5e-15
Identities = 78/300 (26%), Positives = 127/300 (42%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKA-GAGRSHTVVVTE 127
H +A EG ++WG + G+LGHG+ + P ++ + K+ AG H+ VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
DG +G G+LG G + P+ V+ +S V +CG+ T+ LS +G ++ +
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G G+LGHG N Y +P+ I AL G I KV G+ ++A+ S
Sbjct: 587 GGGDNGKLGHGDTNR----------VY----KPKVIEALQGMFIRKVCAGSQSSLALTST 632
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP----PEAVISAGSVNSSCTAGG 303
G VY WG G G E P+ ++ ++ ++ N G
Sbjct: 633 GQVYAWGCGACLGCGSSEAT-ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGN 691
Query: 304 GQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGA----DSSCISWGHAQY 359
+ G+ + G PK + L G ++ + +G H D ++W H Y
Sbjct: 692 NSMGQCGQGNSTGPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW-HRPY 749
Score = 239 (89.2 bits), Expect = 3.3e-16, P = 3.3e-16
Identities = 91/336 (27%), Positives = 154/336 (45%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
Y WG N QL G + + +P + S + +AG + T V++ DG+ A G +
Sbjct: 375 YVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAG--QYCTFVISTDGSVRACGKGSY 432
Query: 140 GQLGSGSIRNE-----IEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
G+LG G N+ + P R + +V+++ G+D + EG + + G YG+
Sbjct: 433 GRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSSK-GSDGHTLAFTTEG-EVFSWGDGDYGK 489
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTW 253
LGHG +SS Q P+ I L G+ +V V+ G H+ AV G +YTW
Sbjct: 490 LGHG--------NSST------QKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTW 535
Query: 254 GFGGYGRLGHREQKDEWVPRRV-DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW--- 309
G G +GRLGH + +P V D+ +NV +S GS ++ + G+ +W
Sbjct: 536 GEGDFGRLGHGDSNSRNIPTLVKDI---SNV----GEVSCGSSHTIALSKDGRT-VWSFG 587
Query: 310 ----GKLKNNGDDWMY-PKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELG 363
GKL + + +Y PK + L G +R + +G+ + + +WG LG
Sbjct: 588 GGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LG 645
Query: 364 YGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G + ++ PK ++ L ++ ++ G H L +
Sbjct: 646 CGS-SEATALRPKLIEELAATRIVDISIGDSHCLAL 680
Score = 211 (79.3 bits), Expect = 4.7e-13, P = 4.7e-13
Identities = 79/292 (27%), Positives = 130/292 (44%)
Query: 122 TVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEG 181
T +V+E +G N QL G+ ++P T A + ++ S +G
Sbjct: 365 TPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG 422
Query: 182 ASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHT 241
S+ G YG+LG G N +T KL +E P R+I ++ K + G HT
Sbjct: 423 -SVRACGKGSYGRLGLGDSNNQSTLK---KLTFE--PH-RSIKKVSSS---KGSDG--HT 470
Query: 242 VAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA 301
+A ++G V++WG G YG+LGH + P+ + + V+ +SAG +S+
Sbjct: 471 LAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVT 527
Query: 302 GGGQLYMWGK----LKNNGDDWM--YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-S 353
G+LY WG+ +GD P + D+S N+ + G+ H + D + S
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWS 585
Query: 354 WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
+G G+LG+G + PK ++ L+GM + V G SL + V
Sbjct: 586 FGGGDNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLALTSTGQV 635
Score = 140 (54.3 bits), Expect = 4.3e-13, Sum P(2) = 4.3e-13
Identities = 43/156 (27%), Positives = 70/156 (44%)
Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVF-QRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
VY WG G +G+L ++ VP F Q V+ + N + A G Y
Sbjct: 3994 VYLWGAGRHGQLAEAG-RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSY- 4051
Query: 309 WGKL-KNNGDDWMYPKPLMDLSGWNLRCM--DSGNMHHFVGADSS--CISWGHAQYGELG 363
G+L + N DD + L G+ + + G+ H + S SWG YG+LG
Sbjct: 4052 -GRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLG 4110
Query: 364 YGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+G P++++ L+G V+ ++CG+ HS V+
Sbjct: 4111 HG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVV 4144
Score = 129 (50.5 bits), Expect = 7.5e-26, Sum P(2) = 7.5e-26
Identities = 45/137 (32%), Positives = 61/137 (44%)
Query: 26 GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
G T W G G L D N V P + L G+ IR V AG S +A+ G+ Y
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LALTSTGQVYA 637
Query: 82 WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
WG LG G + RP ++ EL+ +I G SH + ++ D A+G N G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 141 QLGSGSIRNEI-EPSPV 156
Q G G+ I +P V
Sbjct: 696 QCGQGNSTGPITKPKKV 712
Score = 41 (19.5 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 7/19 (36%), Positives = 8/19 (42%)
Query: 69 HCVAVDVEGRCYTWGRNER 87
HC DV C W +R
Sbjct: 3572 HCYRKDVSVTCIAWFSEDR 3590
Score = 40 (19.1 bits), Expect = 2.5e-15, Sum P(2) = 2.5e-15
Identities = 11/25 (44%), Positives = 13/25 (52%)
Query: 347 ADSSCISWGHAQYGELGYGPYGQKS 371
AD S + G YG L PYG +S
Sbjct: 912 ADLSSVCTG---YGNLSDQPYGTQS 933
Score = 39 (18.8 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 10/36 (27%), Positives = 20/36 (55%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVA 72
+G G + P ++ L G+ I+ ++AG + H +A
Sbjct: 699 QGNSTGPITKPKKVSGLDGIAIQQISAG--TSHSLA 732
Score = 37 (18.1 bits), Expect = 5.2e-15, Sum P(2) = 5.2e-15
Identities = 11/41 (26%), Positives = 18/41 (43%)
Query: 337 DSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
D+ M G S + HA+ G GP + SA+ ++
Sbjct: 2836 DAAEMEE--GFSESADNLDHAENAASGSGPPARGRSAVTRR 2874
>UNIPROTKB|F1S098 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR017986 InterPro:IPR000569 InterPro:IPR001680
InterPro:IPR003877 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016567
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 SUPFAM:SSF56204
CTD:8925 KO:K10594 OMA:HHYQDGI GeneTree:ENSGT00700000104312
EMBL:CU550694 EMBL:CU582937 RefSeq:XP_001927286.4 UniGene:Ssc.96208
UniGene:Ssc.97542 Ensembl:ENSSSCT00000005038 GeneID:100153537
KEGG:ssc:100153537 Uniprot:F1S098
Length = 4859
Score = 265 (98.3 bits), Expect = 2.7e-19, P = 2.7e-19
Identities = 95/331 (28%), Positives = 153/331 (46%)
Query: 22 LLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSC-HCVAVDVEGRCY 80
+L CG + +G+ G D +L T + L G + + C S H +A+ G +
Sbjct: 4046 VLACGEGSYGRLGQ--GNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4102
Query: 81 TWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
+WG + G+LGHG+ ++ RP + L ++ + G H+ VVT DG FG +G
Sbjct: 4103 SWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYG 4162
Query: 141 QLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
+LG G+ N+ P V L ++ ACG + T+ +S+ +G+ + G YG+LG G
Sbjct: 4163 RLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSMVWAFGDGDYGKLGLGN 4221
Query: 200 DNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG----F 255
+T SS P+ + L G I KVACGT +VA+ G+VYT+G
Sbjct: 4222 ----STAKSS----------PQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLI 4267
Query: 256 G-GYGRLGHREQKDEWVPRRVDVFQRNNVLPPE---AVISAGSVNSSCTAGGGQLYMWGK 311
G GR + + +P V + + E A+ S G V + + GQL + G
Sbjct: 4268 GLPEGR-ARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL-GH 4325
Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
+ + P + L G N+R + +G H
Sbjct: 4326 TNHVRE----PTLVTVLQGKNVRQISAGRCH 4352
Score = 251 (93.4 bits), Expect = 7.5e-26, Sum P(2) = 7.5e-26
Identities = 81/277 (29%), Positives = 134/277 (48%)
Query: 134 FGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
+G +HGQL RN + P+ S+ CG + T + + ++L G YG
Sbjct: 4000 WGAGRHGQLAEAG-RNVMVPAAAPSF-SQAQQVICGQNCTFVIQA--NGTVLACGEGSYG 4055
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV--ACGTN-HTVAVDSKGYV 250
+LG G N+ D V I+AL G + ++ +CG++ H++A+ G V
Sbjct: 4056 RLGQG-----NSDDLHVLTV---------ISALQGFVVTQLVTSCGSDGHSMALTESGEV 4101
Query: 251 YTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM-- 308
++WG G YG+LGH + PR+++ Q V+ +S G +S+ G+L+
Sbjct: 4102 FSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQ----MSCGFKHSAVVTSDGKLFTFG 4157
Query: 309 ---WGKLK-NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGEL 362
+G+L N + P+ + L G+ + + G H V AD S + ++G YG+L
Sbjct: 4158 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKL 4217
Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G G KSS P+KVD+L G+ + VACG S+ +
Sbjct: 4218 GLGNSTAKSS--PQKVDVLCGIGIKKVACGTQFSVAL 4252
Score = 249 (92.7 bits), Expect = 2.3e-17, P = 2.3e-17
Identities = 87/365 (23%), Positives = 153/365 (41%)
Query: 44 LVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD---R 100
++ P +L P D + + AG C V + +G G+ G+LG GD + +
Sbjct: 393 ILQP-KLAPSFS-DAQTIEAGQY-CTFV-ISTDGSVRACGKGSYGRLGLGDSNNQSTLKK 448
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
T S K+ + HT+ T +G ++G +G+LG G+ + P ++ +
Sbjct: 449 LTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPL 508
Query: 161 SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
A + + E + G +G+LGHG N N P
Sbjct: 509 QGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNI--------------P 554
Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG--YGRLGHREQKDEWVPRRVDVF 278
+ ++ + +V+CG++HT+A+ G W FGG G+LGH + + P+ ++
Sbjct: 555 TLVKDISN--VGEVSCGSSHTIALSKDGRT-VWSFGGGDNGKLGHGDTNRVYKPKVIEAL 611
Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG--KLKNNGDDW---MYPKPLMDLSGWNL 333
Q + + AGS +S GQ+Y WG G + PK + +L+ +
Sbjct: 612 QGMFIRK----VCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEELAATRI 667
Query: 334 RCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
+ G+ H + D+ +WG+ G+ G G PKKV L+G+ + ++ G
Sbjct: 668 VDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN-STGPITKPKKVSGLDGIAIQQISAG 726
Query: 393 YGHSL 397
HSL
Sbjct: 727 TSHSL 731
Score = 249 (92.7 bits), Expect = 2.6e-16, Sum P(2) = 2.6e-16
Identities = 95/352 (26%), Positives = 155/352 (44%)
Query: 60 FVAAGCVSC--HCV-AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK-- 114
F A V C +C + G G G+LG G+ T++S L + + +
Sbjct: 4024 FSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLV 4083
Query: 115 AGAGRS-HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADF 172
G H++ +TE G ++G +G+LG G+ + P + L E V +CG
Sbjct: 4084 TSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKH 4143
Query: 173 TVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIV 232
+ ++S +G + G YG+LG G NT S+ KL P + AL G I
Sbjct: 4144 SAVVTS-DG-KLFTFGNGDYGRLGLG-----NT--SNKKL-------PERVTALEGYQIG 4187
Query: 233 KVACGTNHTVAVDSKG-YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
+VACG NHT+AV + G V+ +G G YG+LG + P++VDV + ++
Sbjct: 4188 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKK----VA 4243
Query: 292 AGSVNSSCTAGGGQLYMWG--KL----KNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV 345
G+ S G +Y +G +L + + P+ + L+G + + G H
Sbjct: 4244 CGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLA 4303
Query: 346 GADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
A + + +WG G+LG G P V +L+G +V ++ G HS
Sbjct: 4304 LASTGDVYAWGSNSEGQLGLGHTNHVRE--PTLVTVLQGKNVRQISAGRCHS 4353
Score = 241 (89.9 bits), Expect = 2.5e-15, Sum P(2) = 2.5e-15
Identities = 78/300 (26%), Positives = 127/300 (42%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKA-GAGRSHTVVVTE 127
H +A EG ++WG + G+LGHG+ + P ++ + K+ AG H+ VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
DG +G G+LG G + P+ V+ +S V +CG+ T+ LS +G ++ +
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G G+LGHG N Y +P+ I AL G I KV G+ ++A+ S
Sbjct: 587 GGGDNGKLGHGDTNR----------VY----KPKVIEALQGMFIRKVCAGSQSSLALTST 632
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP----PEAVISAGSVNSSCTAGG 303
G VY WG G G E P+ ++ ++ ++ N G
Sbjct: 633 GQVYAWGCGACLGCGSSEAT-ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGN 691
Query: 304 GQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGA----DSSCISWGHAQY 359
+ G+ + G PK + L G ++ + +G H D ++W H Y
Sbjct: 692 NSMGQCGQGNSTGPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW-HRPY 749
Score = 239 (89.2 bits), Expect = 3.3e-16, P = 3.3e-16
Identities = 91/336 (27%), Positives = 154/336 (45%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
Y WG N QL G + + +P + S + +AG + T V++ DG+ A G +
Sbjct: 375 YVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAG--QYCTFVISTDGSVRACGKGSY 432
Query: 140 GQLGSGSIRNE-----IEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
G+LG G N+ + P R + +V+++ G+D + EG + + G YG+
Sbjct: 433 GRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSSK-GSDGHTLAFTTEG-EVFSWGDGDYGK 489
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTW 253
LGHG +SS Q P+ I L G+ +V V+ G H+ AV G +YTW
Sbjct: 490 LGHG--------NSST------QKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTW 535
Query: 254 GFGGYGRLGHREQKDEWVPRRV-DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW--- 309
G G +GRLGH + +P V D+ +NV +S GS ++ + G+ +W
Sbjct: 536 GEGDFGRLGHGDSNSRNIPTLVKDI---SNV----GEVSCGSSHTIALSKDGRT-VWSFG 587
Query: 310 ----GKLKNNGDDWMY-PKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELG 363
GKL + + +Y PK + L G +R + +G+ + + +WG LG
Sbjct: 588 GGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LG 645
Query: 364 YGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G + ++ PK ++ L ++ ++ G H L +
Sbjct: 646 CGS-SEATALRPKLIEELAATRIVDISIGDSHCLAL 680
Score = 208 (78.3 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 78/290 (26%), Positives = 129/290 (44%)
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
+V+E +G N QL G+ ++P T A + ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423
Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
+ G YG+LG G N +T KL +E P R+I ++ K + G HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFE--PH-RSIKKVSSS---KGSDG--HTLA 472
Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
++G V++WG G YG+LGH + P+ + + V+ +SAG +S+
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529
Query: 304 GQLYMWGK----LKNNGDDWM--YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWG 355
G+LY WG+ +GD P + D+S N+ + G+ H + D + S+G
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFG 587
Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
G+LG+G + PK ++ L+GM + V G SL + V
Sbjct: 588 GGDNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLALTSTGQV 635
Score = 140 (54.3 bits), Expect = 4.3e-13, Sum P(2) = 4.3e-13
Identities = 43/156 (27%), Positives = 70/156 (44%)
Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVF-QRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
VY WG G +G+L ++ VP F Q V+ + N + A G Y
Sbjct: 3997 VYLWGAGRHGQLAEAG-RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSY- 4054
Query: 309 WGKL-KNNGDDWMYPKPLMDLSGWNLRCM--DSGNMHHFVGADSS--CISWGHAQYGELG 363
G+L + N DD + L G+ + + G+ H + S SWG YG+LG
Sbjct: 4055 -GRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLG 4113
Query: 364 YGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+G P++++ L+G V+ ++CG+ HS V+
Sbjct: 4114 HG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVV 4147
Score = 129 (50.5 bits), Expect = 7.5e-26, Sum P(2) = 7.5e-26
Identities = 45/137 (32%), Positives = 61/137 (44%)
Query: 26 GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
G T W G G L D N V P + L G+ IR V AG S +A+ G+ Y
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LALTSTGQVYA 637
Query: 82 WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
WG LG G + RP ++ EL+ +I G SH + ++ D A+G N G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 141 QLGSGSIRNEI-EPSPV 156
Q G G+ I +P V
Sbjct: 696 QCGQGNSTGPITKPKKV 712
Score = 40 (19.1 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 7/19 (36%), Positives = 8/19 (42%)
Query: 69 HCVAVDVEGRCYTWGRNER 87
HC DV C W +R
Sbjct: 3575 HCYRKDVSITCIAWFSEDR 3593
Score = 40 (19.1 bits), Expect = 2.5e-15, Sum P(2) = 2.5e-15
Identities = 11/25 (44%), Positives = 13/25 (52%)
Query: 347 ADSSCISWGHAQYGELGYGPYGQKS 371
AD S + G YG L PYG +S
Sbjct: 912 ADLSSVCTG---YGNLSDQPYGTQS 933
Score = 39 (18.8 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 10/36 (27%), Positives = 20/36 (55%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVA 72
+G G + P ++ L G+ I+ ++AG + H +A
Sbjct: 699 QGNSTGPITKPKKVSGLDGIAIQQISAG--TSHSLA 732
>UNIPROTKB|Q15751 [details] [associations]
symbol:HERC1 "Probable E3 ubiquitin-protein ligase HERC1"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005086 "ARF
guanyl-nucleotide exchange factor activity" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=TAS] Pfam:PF00632
InterPro:IPR017986 InterPro:IPR000569 InterPro:IPR001680
InterPro:IPR003877 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 GO:GO:0005794 GO:GO:0016020 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 GO:GO:0005086
SUPFAM:SSF56204 eggNOG:COG5021 EMBL:U50078 EMBL:AC073167
EMBL:AC118274 EMBL:BC040929 IPI:IPI00022479 PIR:S71752
RefSeq:NP_003913.3 UniGene:Hs.210385 HSSP:Q922Y1
ProteinModelPortal:Q15751 SMR:Q15751 IntAct:Q15751 STRING:Q15751
PhosphoSite:Q15751 DMDM:296434522 PaxDb:Q15751 PRIDE:Q15751
Ensembl:ENST00000443617 GeneID:8925 KEGG:hsa:8925 UCSC:uc002amp.3
CTD:8925 GeneCards:GC15M063900 HGNC:HGNC:4867 HPA:HPA049749
MIM:605109 neXtProt:NX_Q15751 PharmGKB:PA29242 HOGENOM:HOG000168589
HOVERGEN:HBG053919 InParanoid:Q15751 KO:K10594 OMA:HHYQDGI
OrthoDB:EOG40GCPW GenomeRNAi:8925 NextBio:33556 ArrayExpress:Q15751
Bgee:Q15751 CleanEx:HS_HERC1 Genevestigator:Q15751 Uniprot:Q15751
Length = 4861
Score = 267 (99.0 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 96/331 (29%), Positives = 153/331 (46%)
Query: 22 LLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSC-HCVAVDVEGRCY 80
+L CG + +G+ G D +L T + L G + + C S H +A+ G +
Sbjct: 4048 VLACGEGSYGRLGQ--GNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4104
Query: 81 TWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
+WG + G+LGHG+ ++ RP + L ++ + G H+ VVT DG FG +G
Sbjct: 4105 SWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYG 4164
Query: 141 QLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
+LG G+ N+ P V L ++ ACG + T+ +S+ +G+ + G YG+LG G
Sbjct: 4165 RLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSMVWAFGDGDYGKLGLGN 4223
Query: 200 DNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG----F 255
+T SS P+ I L G I KVACGT +VA+ G+VYT+G
Sbjct: 4224 ----STAKSS----------PQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLI 4269
Query: 256 G-GYGRLGHREQKDEWVPRRVDVFQRNNVLPPE---AVISAGSVNSSCTAGGGQLYMWGK 311
G GR + + +P V + + E A+ S G V + + GQL + G
Sbjct: 4270 GLPEGR-ARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGL-GH 4327
Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
+ + P + L G N+R + +G H
Sbjct: 4328 TNHVRE----PTLVTGLQGKNVRQISAGRCH 4354
Score = 250 (93.1 bits), Expect = 8.1e-26, Sum P(2) = 8.1e-26
Identities = 80/277 (28%), Positives = 134/277 (48%)
Query: 134 FGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
+G +HGQL RN + P+ S+ CG + T + + ++L G YG
Sbjct: 4002 WGAGRHGQLAEAG-RNVMVPAAAPSF-SQAQQVICGQNCTFVIQA--NGTVLACGEGSYG 4057
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV--ACGTN-HTVAVDSKGYV 250
+LG G N+ D V I+AL G + ++ +CG++ H++A+ G V
Sbjct: 4058 RLGQG-----NSDDLHVLTV---------ISALQGFVVTQLVTSCGSDGHSMALTESGEV 4103
Query: 251 YTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM-- 308
++WG G YG+LGH + PR+++ Q V+ +S G +S+ G+L+
Sbjct: 4104 FSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQ----MSCGFKHSAVVTSDGKLFTFG 4159
Query: 309 ---WGKLK-NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGEL 362
+G+L N + P+ + L G+ + + G H V AD S + ++G YG+L
Sbjct: 4160 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKL 4219
Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G G KSS P+K+D+L G+ + VACG S+ +
Sbjct: 4220 GLGNSTAKSS--PQKIDVLCGIGIKKVACGTQFSVAL 4254
Score = 249 (92.7 bits), Expect = 2.3e-17, P = 2.3e-17
Identities = 87/365 (23%), Positives = 153/365 (41%)
Query: 44 LVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD---R 100
++ P +L P D + + AG C V + +G G+ G+LG GD + +
Sbjct: 393 ILQP-KLAPSFS-DAQTIEAGQY-CTFV-ISTDGSVRACGKGSYGRLGLGDSNNQSTLKK 448
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
T S K+ + HT+ T +G ++G +G+LG G+ + P ++ +
Sbjct: 449 LTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPL 508
Query: 161 SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
A + + E + G +G+LGHG N N P
Sbjct: 509 QGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNI--------------P 554
Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG--YGRLGHREQKDEWVPRRVDVF 278
+ ++ + +V+CG++HT+A+ G W FGG G+LGH + + P+ ++
Sbjct: 555 TLVKDISN--VGEVSCGSSHTIALSKDGRT-VWSFGGGDNGKLGHGDTNRVYKPKVIEAL 611
Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG--KLKNNGDDW---MYPKPLMDLSGWNL 333
Q + + AGS +S GQ+Y WG G + PK + +L+ +
Sbjct: 612 QGMFIRK----VCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEELAATRI 667
Query: 334 RCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
+ G+ H + D+ +WG+ G+ G G PKKV L+G+ + ++ G
Sbjct: 668 VDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN-STGPITKPKKVSGLDGIAIQQISAG 726
Query: 393 YGHSL 397
HSL
Sbjct: 727 TSHSL 731
Score = 241 (89.9 bits), Expect = 2.0e-15, Sum P(2) = 2.0e-15
Identities = 94/352 (26%), Positives = 154/352 (43%)
Query: 60 FVAAGCVSC--HCV-AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK-- 114
F A V C +C + G G G+LG G+ T++S L + + +
Sbjct: 4026 FSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLV 4085
Query: 115 AGAGRS-HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADF 172
G H++ +TE G ++G +G+LG G+ + P + L E V +CG
Sbjct: 4086 TSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKH 4145
Query: 173 TVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIV 232
+ ++S +G + G YG+LG G NT S+ KL P + AL G I
Sbjct: 4146 SAVVTS-DG-KLFTFGNGDYGRLGLG-----NT--SNKKL-------PERVTALEGYQIG 4189
Query: 233 KVACGTNHTVAVDSKG-YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
+VACG NHT+AV + G V+ +G G YG+LG + P+++DV + ++
Sbjct: 4190 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKK----VA 4245
Query: 292 AGSVNSSCTAGGGQLYMWG--KL----KNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV 345
G+ S G +Y +G +L + + P+ + L+G + + G H
Sbjct: 4246 CGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLA 4305
Query: 346 GADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
A + + +WG G+LG G P V L+G +V ++ G HS
Sbjct: 4306 LASNGDVYAWGSNSEGQLGLGHTNHVRE--PTLVTGLQGKNVRQISAGRCHS 4355
Score = 241 (89.9 bits), Expect = 2.5e-15, Sum P(2) = 2.5e-15
Identities = 78/300 (26%), Positives = 127/300 (42%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKA-GAGRSHTVVVTE 127
H +A EG ++WG + G+LGHG+ + P ++ + K+ AG H+ VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
DG +G G+LG G + P+ V+ +S V +CG+ T+ LS +G ++ +
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G G+LGHG N Y +P+ I AL G I KV G+ ++A+ S
Sbjct: 587 GGGDNGKLGHGDTNR----------VY----KPKVIEALQGMFIRKVCAGSQSSLALTST 632
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEA----VISAGSVNSSCTAGG 303
G VY WG G G E P+ ++ ++ ++ N G
Sbjct: 633 GQVYAWGCGACLGCGSSEAT-ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGN 691
Query: 304 GQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGA----DSSCISWGHAQY 359
+ G+ + G PK + L G ++ + +G H D ++W H Y
Sbjct: 692 NSMGQCGQGNSTGPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW-HRPY 749
Score = 240 (89.5 bits), Expect = 2.5e-16, P = 2.5e-16
Identities = 92/336 (27%), Positives = 154/336 (45%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
Y WG N QL G + + +P + S + +AG + T V++ DG+ A G +
Sbjct: 375 YVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAG--QYCTFVISTDGSVRACGKGSY 432
Query: 140 GQLGSGSIRNE-----IEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
G+LG G N+ + P R + +V+++ G+D + EG + + G YG+
Sbjct: 433 GRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSSK-GSDGHTLAFTTEG-EVFSWGDGDYGK 489
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTW 253
LGHG +SS Q P+ I L G+ +V V+ G H+ AV G +YTW
Sbjct: 490 LGHG--------NSST------QKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTW 535
Query: 254 GFGGYGRLGHREQKDEWVPRRV-DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW--- 309
G G +GRLGH + +P V D+ +NV +S GS ++ + G+ +W
Sbjct: 536 GEGDFGRLGHGDSNSRNIPTLVKDI---SNV----GEVSCGSSHTIALSKDGRT-VWSFG 587
Query: 310 ----GKLKNNGDDWMY-PKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELG 363
GKL + + +Y PK + L G +R + +G+ + + +WG LG
Sbjct: 588 GGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LG 645
Query: 364 YGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G + ++ PK ++ L ++ V+ G H L +
Sbjct: 646 CGS-SEATALRPKLIEELAATRIVDVSIGDSHCLAL 680
Score = 208 (78.3 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 78/290 (26%), Positives = 129/290 (44%)
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
+V+E +G N QL G+ ++P T A + ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423
Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
+ G YG+LG G N +T KL +E P R+I ++ K + G HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFE--PH-RSIKKVSSS---KGSDG--HTLA 472
Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
++G V++WG G YG+LGH + P+ + + V+ +SAG +S+
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529
Query: 304 GQLYMWGK----LKNNGDDWM--YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWG 355
G+LY WG+ +GD P + D+S N+ + G+ H + D + S+G
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFG 587
Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
G+LG+G + PK ++ L+GM + V G SL + V
Sbjct: 588 GGDNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLALTSTGQV 635
Score = 140 (54.3 bits), Expect = 2.3e-12, Sum P(3) = 2.3e-12
Identities = 43/156 (27%), Positives = 70/156 (44%)
Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVF-QRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
VY WG G +G+L ++ VP F Q V+ + N + A G Y
Sbjct: 3999 VYLWGAGRHGQLAEAG-RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSY- 4056
Query: 309 WGKL-KNNGDDWMYPKPLMDLSGWNLRCM--DSGNMHHFVGADSS--CISWGHAQYGELG 363
G+L + N DD + L G+ + + G+ H + S SWG YG+LG
Sbjct: 4057 -GRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLG 4115
Query: 364 YGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+G P++++ L+G V+ ++CG+ HS V+
Sbjct: 4116 HG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVV 4149
Score = 130 (50.8 bits), Expect = 8.1e-26, Sum P(2) = 8.1e-26
Identities = 45/137 (32%), Positives = 61/137 (44%)
Query: 26 GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
G T W G G L D N V P + L G+ IR V AG S +A+ G+ Y
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LALTSTGQVYA 637
Query: 82 WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
WG LG G + RP ++ EL+ +I G SH + ++ D A+G N G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 141 QLGSGSIRNEI-EPSPV 156
Q G G+ I +P V
Sbjct: 696 QCGQGNSTGPITKPKKV 712
Score = 41 (19.5 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 7/19 (36%), Positives = 8/19 (42%)
Query: 69 HCVAVDVEGRCYTWGRNER 87
HC DV C W +R
Sbjct: 3577 HCYRKDVSVTCIAWFSEDR 3595
Score = 41 (19.5 bits), Expect = 2.3e-12, Sum P(3) = 2.3e-12
Identities = 10/35 (28%), Positives = 15/35 (42%)
Query: 212 LAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDS 246
LA A + + L + ++ A G N T DS
Sbjct: 3273 LASNAPSAAKLLVQLCTQNLISAATGVNLTTVDDS 3307
Score = 40 (19.1 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 17/56 (30%), Positives = 26/56 (46%)
Query: 53 LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH-GDKIQRDRPTIVSEL 107
L V ++F+A GC V +T G+ E G+L H D I+ + I E+
Sbjct: 1674 LTSVRLQFLA-GCFGLGTVG-------HTGGKGESGRLHHYQDGIRAAKRNIQIEI 1721
Score = 40 (19.1 bits), Expect = 2.5e-15, Sum P(2) = 2.5e-15
Identities = 11/25 (44%), Positives = 13/25 (52%)
Query: 347 ADSSCISWGHAQYGELGYGPYGQKS 371
AD S + G YG L PYG +S
Sbjct: 912 ADLSSVCTG---YGNLSDQPYGTQS 933
Score = 39 (18.8 bits), Expect = 2.5e-16, Sum P(2) = 2.5e-16
Identities = 10/36 (27%), Positives = 20/36 (55%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVA 72
+G G + P ++ L G+ I+ ++AG + H +A
Sbjct: 699 QGNSTGPITKPKKVSGLDGIAIQQISAG--TSHSLA 732
>UNIPROTKB|E1C4H7 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] Pfam:PF00632 InterPro:IPR017986
InterPro:IPR000569 InterPro:IPR001680 InterPro:IPR003877
InterPro:IPR015880 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 SMART:SM00355 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008270 GO:GO:0016567 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 SUPFAM:SSF56204
OMA:HHYQDGI GeneTree:ENSGT00700000104312 EMBL:AADN02040444
EMBL:AADN02040445 EMBL:AADN02040446 IPI:IPI00593079
Ensembl:ENSGALT00000005344 Uniprot:E1C4H7
Length = 4863
Score = 280 (103.6 bits), Expect = 2.8e-21, P = 2.8e-21
Identities = 95/331 (28%), Positives = 155/331 (46%)
Query: 22 LLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSC-HCVAVDVEGRCY 80
+L CG + +G+ G D +L T + L G + + C S H +A+ G +
Sbjct: 4048 VLACGEGSYGRLGQ--GNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4104
Query: 81 TWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
+WG + G+LGHG+ ++ RP + L ++ + G H+ VVT DG FG +G
Sbjct: 4105 SWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYG 4164
Query: 141 QLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
+LG G+ N+ P V L ++ ACG + TV +S+ +G+ + G YG+LG G
Sbjct: 4165 RLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAVST-DGSMVWAFGDGDYGKLGLGN 4223
Query: 200 DNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYG 259
+T SS P+ + L G I KVACGT +VA+ G+VYT+G
Sbjct: 4224 ----STAKSS----------PQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQVSDR 4269
Query: 260 RLGHRE--QKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN-- 315
+G E ++ P++V V + V + I+ G+ ++ + G +Y WG
Sbjct: 4270 LIGLPEGRARNHNRPQQVPVL--SGVFIED--IAVGAEHTLALSSTGDVYAWGSNSEGQL 4325
Query: 316 G----DDWMYPKPLMDLSGWNLRCMDSGNMH 342
G + P + L G N+R + +G H
Sbjct: 4326 GLGHTNHVREPTLITVLQGKNIRQISAGRCH 4356
Score = 250 (93.1 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 87/365 (23%), Positives = 153/365 (41%)
Query: 44 LVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD---R 100
++ P +L P D + + AG C V + +G G+ G+LG GD + +
Sbjct: 393 ILQP-KLAPSFS-DAQTIEAGQY-CTFV-ISTDGSVRACGKGSYGRLGLGDSNNQSTLKK 448
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
T S K+ + HT+ T +G ++G +G+LG G+ + P ++ +
Sbjct: 449 LTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPL 508
Query: 161 SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
A + + E + G +G+LGHG N N P
Sbjct: 509 QGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNI--------------P 554
Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG--YGRLGHREQKDEWVPRRVDVF 278
+ ++ + +V+CG++HT+A+ G W FGG G+LGH + + P+ ++
Sbjct: 555 TLVKDISN--VGEVSCGSSHTIALSKDGRT-VWSFGGGDNGKLGHGDTNRVYKPKVIEAL 611
Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG--KLKNNGDDW---MYPKPLMDLSGWNL 333
Q + + AGS +S GQ+Y WG G + PK + +L+ +
Sbjct: 612 QGMFIRK----VCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEELAATRI 667
Query: 334 RCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
+ G+ H + D+ +WG+ G+ G G PKKV L+G+ + ++ G
Sbjct: 668 VDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN-STGPITKPKKVSGLDGVSIQQISAG 726
Query: 393 YGHSL 397
HSL
Sbjct: 727 TSHSL 731
Score = 247 (92.0 bits), Expect = 2.4e-25, Sum P(2) = 2.4e-25
Identities = 85/294 (28%), Positives = 140/294 (47%)
Query: 134 FGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
+G +HGQL RN + P S+ CG + T + + ++L G YG
Sbjct: 4002 WGAGRHGQLAEAG-RNVMVPVAAPSF-SQAQQVVCGQNCTFVIQA--NGTVLACGEGSYG 4057
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV--ACGTN-HTVAVDSKGYV 250
+LG G N+ D V I+AL G + ++ +CG++ H++A+ G V
Sbjct: 4058 RLGQG-----NSDDLHVLTV---------ISALQGFVVTQLVTSCGSDGHSMALTESGEV 4103
Query: 251 YTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM-- 308
++WG G YG+LGH + PR+++ Q V+ +S G +S+ G+L+
Sbjct: 4104 FSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQ----MSCGFKHSAVVTADGKLFTFG 4159
Query: 309 ---WGKLK-NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGEL 362
+G+L N + P+ + L G+ + + G H V D S + ++G YG+L
Sbjct: 4160 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKL 4219
Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV---GERLDQVI 413
G G KSS P+KVDIL G+ + VACG S+ + +V G+ D++I
Sbjct: 4220 GLGNSTAKSS--PQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQVSDRLI 4271
Score = 245 (91.3 bits), Expect = 5.0e-16, Sum P(2) = 5.0e-16
Identities = 91/354 (25%), Positives = 154/354 (43%)
Query: 60 FVAAGCVSC--HCV-AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK-- 114
F A V C +C + G G G+LG G+ T++S L + + +
Sbjct: 4026 FSQAQQVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLV 4085
Query: 115 AGAGRS-HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADF 172
G H++ +TE G ++G +G+LG G+ + P + L E V +CG
Sbjct: 4086 TSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKH 4145
Query: 173 TVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIV 232
+ +++ +G + G YG+LG G NT S+ KL P + AL G I
Sbjct: 4146 SAVVTA-DG-KLFTFGNGDYGRLGLG-----NT--SNKKL-------PERVTALEGYQIG 4189
Query: 233 KVACGTNHTVAVDSKG-YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
+VACG NHTVAV + G V+ +G G YG+LG + P++VD+ + ++
Sbjct: 4190 QVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKK----VA 4245
Query: 292 AGSVNSSCTAGGGQLYMWGKLKNN--------GDDWMYPKPLMDLSGWNLRCMDSGNMHH 343
G+ S G +Y +G++ + + P+ + LSG + + G H
Sbjct: 4246 CGTQFSVALTKDGHVYTFGQVSDRLIGLPEGRARNHNRPQQVPVLSGVFIEDIAVGAEHT 4305
Query: 344 F-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
+ + +WG G+LG G P + +L+G ++ ++ G HS
Sbjct: 4306 LALSSTGDVYAWGSNSEGQLGLGHTNHVRE--PTLITVLQGKNIRQISAGRCHS 4357
Score = 244 (91.0 bits), Expect = 8.7e-17, P = 8.7e-17
Identities = 78/300 (26%), Positives = 128/300 (42%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKA-GAGRSHTVVVTE 127
H +A EG ++WG + G+LGHG+ + P ++ + K+ AG H+ VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
DG +G G+LG G + P+ V+ +S V +CG+ T+ LS +G ++ +
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G G+LGHG N Y +P+ I AL G I KV G+ ++A+ S
Sbjct: 587 GGGDNGKLGHGDTNR----------VY----KPKVIEALQGMFIRKVCAGSQSSLALTST 632
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP----PEAVISAGSVNSSCTAGG 303
G VY WG G G E P+ ++ ++ ++ N G
Sbjct: 633 GQVYAWGCGACLGCGSSEAT-ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGN 691
Query: 304 GQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGA----DSSCISWGHAQY 359
+ G+ + G PK + L G +++ + +G H D ++W H Y
Sbjct: 692 NSMGQCGQGNSTGPITK-PKKVSGLDGVSIQQISAGTSHSLAWTALPRDRQVVAW-HRPY 749
Score = 242 (90.2 bits), Expect = 2.9e-15, Sum P(3) = 2.9e-15
Identities = 89/336 (26%), Positives = 151/336 (44%)
Query: 77 GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
G+C Y WG GQL R+ V+ S + ++ G++ T V+ +G LA
Sbjct: 3995 GKCDVYLWGAGRHGQLAEAG---RNVMVPVAAPSFSQAQQVVCGQNCTFVIQANGTVLAC 4051
Query: 135 GWNKHGQLGSGSIRNEIEP----SPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLP 190
G +G+LG G+ +++ S ++ V T+CG+D ++ E + + G
Sbjct: 4052 GEGSYGRLGQGN-SDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDG 4109
Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
YG+LGHG + Q RPR I AL GE +V+++CG H+ V + G +
Sbjct: 4110 DYGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKL 4155
Query: 251 YTWGFGGYGRLGHREQKDEWVPRRVDV---FQRNNVLPP-EAVISAGSVNSSCTAGGGQL 306
+T+G G YGRLG ++ +P RV +Q V ++ + S A G
Sbjct: 4156 FTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGD 4215
Query: 307 YMWGKLK-NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGY 364
Y GKL N P+ + L G ++ + G + D ++G +G
Sbjct: 4216 Y--GKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQVSDRLIGL 4273
Query: 365 GPYGQ-KSSAMPKKVDILEGMHVISVACGYGHSLVI 399
P G+ ++ P++V +L G+ + +A G H+L +
Sbjct: 4274 -PEGRARNHNRPQQVPVLSGVFIEDIAVGAEHTLAL 4308
Score = 239 (89.2 bits), Expect = 3.3e-16, P = 3.3e-16
Identities = 91/336 (27%), Positives = 154/336 (45%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
Y WG N QL G + + +P + S + +AG + T V++ DG+ A G +
Sbjct: 375 YVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAG--QYCTFVISTDGSVRACGKGSY 432
Query: 140 GQLGSGSIRNE-----IEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
G+LG G N+ + P R + +V+++ G+D + EG + + G YG+
Sbjct: 433 GRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSSK-GSDGHTLAFTTEG-EVFSWGDGDYGK 489
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTW 253
LGHG +SS Q P+ I L G+ +V V+ G H+ AV G +YTW
Sbjct: 490 LGHG--------NSST------QKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTW 535
Query: 254 GFGGYGRLGHREQKDEWVPRRV-DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW--- 309
G G +GRLGH + +P V D+ +NV +S GS ++ + G+ +W
Sbjct: 536 GEGDFGRLGHGDSNSRNIPTLVKDI---SNV----GEVSCGSSHTIALSKDGRT-VWSFG 587
Query: 310 ----GKLKNNGDDWMY-PKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELG 363
GKL + + +Y PK + L G +R + +G+ + + +WG LG
Sbjct: 588 GGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LG 645
Query: 364 YGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G + ++ PK ++ L ++ ++ G H L +
Sbjct: 646 CGS-SEATALRPKLIEELAATRIVDISIGDSHCLAL 680
Score = 208 (78.3 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 78/290 (26%), Positives = 129/290 (44%)
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
+V+E +G N QL G+ ++P T A + ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423
Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
+ G YG+LG G N +T KL +E P R+I ++ K + G HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFE--PH-RSIKKVSSS---KGSDG--HTLA 472
Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
++G V++WG G YG+LGH + P+ + + V+ +SAG +S+
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529
Query: 304 GQLYMWGK----LKNNGDDWM--YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWG 355
G+LY WG+ +GD P + D+S N+ + G+ H + D + S+G
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFG 587
Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
G+LG+G + PK ++ L+GM + V G SL + V
Sbjct: 588 GGDNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLALTSTGQV 635
Score = 129 (50.5 bits), Expect = 2.4e-25, Sum P(2) = 2.4e-25
Identities = 45/137 (32%), Positives = 61/137 (44%)
Query: 26 GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
G T W G G L D N V P + L G+ IR V AG S +A+ G+ Y
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LALTSTGQVYA 637
Query: 82 WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
WG LG G + RP ++ EL+ +I G SH + ++ D A+G N G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 141 QLGSGSIRNEI-EPSPV 156
Q G G+ I +P V
Sbjct: 696 QCGQGNSTGPITKPKKV 712
Score = 42 (19.8 bits), Expect = 5.0e-16, Sum P(2) = 5.0e-16
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVA 72
+G G + P ++ L GV I+ ++AG + H +A
Sbjct: 699 QGNSTGPITKPKKVSGLDGVSIQQISAG--TSHSLA 732
Score = 41 (19.5 bits), Expect = 6.6e-16, Sum P(3) = 6.6e-16
Identities = 8/27 (29%), Positives = 12/27 (44%)
Query: 69 HCVAVDVEGRCYTWGRNERG-QLGHGD 94
HC DV C W ++ +G+ D
Sbjct: 3574 HCYRKDVSVTCLAWFSEDKPFAVGYSD 3600
>TAIR|locus:2079147 [details] [associations]
symbol:AT3G47660 "AT3G47660" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0008536
"Ran GTPase binding" evidence=ISS] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000306 Pfam:PF01363 SMART:SM00064
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002686 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 IPI:IPI00548806 RefSeq:NP_190350.4 UniGene:At.48747
UniGene:At.66547 ProteinModelPortal:F4JCN3 SMR:F4JCN3 PRIDE:F4JCN3
EnsemblPlants:AT3G47660.1 GeneID:823920 KEGG:ath:AT3G47660
OMA:CLSHEIS ArrayExpress:F4JCN3 Uniprot:F4JCN3
Length = 954
Score = 292 (107.8 bits), Expect = 1.4e-24, P = 1.4e-24
Identities = 105/368 (28%), Positives = 157/368 (42%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P L+ V +D + ++ G + + V V +G+ Y+WG G+LGHG P ++ E
Sbjct: 290 PKVLKSHVALDAQSISCG--TNYAVLVTKQGQMYSWGEESGGRLGHGVCSYVPHPKLIDE 347
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPSPVRCLVSE-- 162
+ ++ A G HT VT G+ A+G H G LG GS + +P VR L
Sbjct: 348 FNGSTVELADCGEFHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKP--VRILGQMEG 405
Query: 163 --VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
V A +CG T +++S EG + G +G LGHG N P
Sbjct: 406 IYVKAISCGPWHTAFVTS-EG-KLFTFGDGTFGALGHGDRISTNI--------------P 449
Query: 221 RAIAALAGETIVKVACGTNHTVAV-------DSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
R + AL G +K ACG H+ AV S G ++TWG G GRLGH + + +P
Sbjct: 450 REVEALNGCRTIKAACGVWHSAAVVSVFGEATSSGKLFTWGDGDDGRLGHGDIECRLIPS 509
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNL 333
V + + V S+ + + G Q+Y G + D P + G +
Sbjct: 510 CVTELDTTSF---QQVACGQSITVALSMSG-QVYAMGTADPSHDIVRAPSCIEGGLGKSF 565
Query: 334 RCMDSGNMHHFVGADSSC--ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVAC 391
+ HH +S +WG G+LG+G + MP V L+G V V C
Sbjct: 566 VQEVACGFHHIAVLNSKAEVYTWGKGSNGQLGHGDTEYR--CMPTLVKALKGKQVRKVVC 623
Query: 392 GYGHSLVI 399
G ++ I
Sbjct: 624 GSNYTATI 631
Score = 200 (75.5 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 53/191 (27%), Positives = 87/191 (45%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P+ + + ++CGTN+ V V +G +Y+WG GRLGH P+ +D F
Sbjct: 290 PKVLKSHVALDAQSISCGTNYAVLVTKQGQMYSWGEESGGRLGHGVCSYVPHPKLIDEFN 349
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN------GDDWMYPKP---LMDLSG 330
+ V + G ++ G LY WG +N G + KP L + G
Sbjct: 350 GSTV----ELADCGEFHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKPVRILGQMEG 405
Query: 331 WNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
++ + G H FV ++ ++G +G LG+G + S+ +P++V+ L G I
Sbjct: 406 IYVKAISCGPWHTAFVTSEGKLFTFGDGTFGALGHGD--RISTNIPREVEALNGCRTIKA 463
Query: 390 ACGYGHSLVIV 400
ACG HS +V
Sbjct: 464 ACGVWHSAAVV 474
>TAIR|locus:2159295 [details] [associations]
symbol:RUG3 "RCC1/UVR8/GEF-like 3" species:3702
"Arabidopsis thaliana" [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008536 "Ran GTPase binding" evidence=ISS] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0008380 "RNA splicing"
evidence=IMP] [GO:0032981 "mitochondrial respiratory chain complex
I assembly" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 EMBL:CP002688 GO:GO:0008380 EMBL:AB015472
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0032981
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 UniGene:At.29139
UniGene:At.50545 HSSP:P18754 IPI:IPI00532631 RefSeq:NP_200895.2
ProteinModelPortal:Q9FJG9 SMR:Q9FJG9 PRIDE:Q9FJG9
EnsemblPlants:AT5G60870.1 GeneID:836208 KEGG:ath:AT5G60870
TAIR:At5g60870 HOGENOM:HOG000030010 InParanoid:Q9FJG9 OMA:ISCGLFH
PhylomeDB:Q9FJG9 ProtClustDB:CLSN2681113 Genevestigator:Q9FJG9
Uniprot:Q9FJG9
Length = 445
Score = 287 (106.1 bits), Expect = 1.4e-24, P = 1.4e-24
Identities = 90/289 (31%), Positives = 133/289 (46%)
Query: 34 GRRKGALDGNLVSPTRLRPLVGV-DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH 92
G R G N V L PL IR +A G H VA+ +G +TWG G LGH
Sbjct: 129 GGRLGFGQENSVFVPNLNPLFEEHSIRCIALG--GLHSVALTHQGDVFTWGYGGFGALGH 186
Query: 93 GDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK-HGQLGSGSIRNEI 151
+ P V + KI +HT +TE G +G + G+LG G R
Sbjct: 187 KVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGELYMWGREEGDGRLGLGPGRGPN 246
Query: 152 E------PSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNT 205
E PS V+ L V + +CG FT+ L+ EG + N G +LG G DN
Sbjct: 247 EGGGLSVPSKVKALTVPVASVSCGGFFTMALTK-EG-QLWNWGANSNYELGRG-DNLGG- 302
Query: 206 KDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHRE 265
+E P P +L G I ++ACG H++A+ +G V +WG GG+G+LG
Sbjct: 303 --------WEPMPVP----SLEGVRITQIACGGYHSLALTEEGKVLSWGHGGHGQLGSSS 350
Query: 266 QKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
+++ VP ++ ++ I++G +S+ GG+L+MWG K+
Sbjct: 351 LRNQKVPTEIEALADKKIV----FIASGGSSSAAITDGGELWMWGNAKD 395
Score = 191 (72.3 bits), Expect = 8.4e-14, Sum P(2) = 8.4e-14
Identities = 79/292 (27%), Positives = 120/292 (41%)
Query: 134 FGWNK--HGQLGSGSIRNEIEPSPVRCLV--SEVTATACGADFTVWLSSVEGASILNAGL 189
F W + GQLG G + PSPV L+ S+ + + + S ++ GL
Sbjct: 51 FSWGRGASGQLGGGIEEIRMYPSPVANLLFRSDQSFSLAQTPGRIDADSSSFRIGISCGL 110
Query: 190 PQYGQLGHGTDNEYNTKDSSVKLAYEAQPR---PRAIAALAGETIVKVACGTNHTVAVDS 246
G G D K +L + + P +I +A G H+VA+
Sbjct: 111 FHSGLTIDG-DLWIWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHSVALTH 169
Query: 247 KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
+G V+TWG+GG+G LGH+ E VPRRVD + A+ ++G+ ++ T G +L
Sbjct: 170 QGDVFTWGYGGFGALGHKVYTRELVPRRVDDSWDCKI---SAIATSGTHTAAITESG-EL 225
Query: 307 YMWGKLK-------------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCIS 353
YMWG+ + N G P + L+ G + + +
Sbjct: 226 YMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTVPVASVSCGGFFTMALTKEGQLWN 285
Query: 354 WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
WG ELG G MP V LEG+ + +ACG HSL + + V
Sbjct: 286 WGANSNYELGRGDNLGGWEPMP--VPSLEGVRITQIACGGYHSLALTEEGKV 335
Score = 184 (69.8 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 52/198 (26%), Positives = 94/198 (47%)
Query: 33 VGRRKGALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG 91
+G +G +G +S P++++ L + + C +A+ EG+ + WG N +LG
Sbjct: 239 LGPGRGPNEGGGLSVPSKVKALT---VPVASVSCGGFFTMALTKEGQLWNWGANSNYELG 295
Query: 92 HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEI 151
GD + P V L +I + G H++ +TE+G L++G HGQLGS S+RN+
Sbjct: 296 RGDNLGGWEPMPVPSLEGVRITQIACGGYHSLALTEEGKVLSWGHGGHGQLGSSSLRNQK 355
Query: 152 EPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSV 210
P+ + L + + A G + ++ +G + G + QLG E T V
Sbjct: 356 VPTEIEALADKKIVFIASGGSSSAAIT--DGGELWMWGNAKDFQLGVPGLPEIQTTPVEV 413
Query: 211 K-LAYEAQPRPRAIAALA 227
L E + +P + +++
Sbjct: 414 NFLTEEDECQPHKVISIS 431
Score = 173 (66.0 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 78/358 (21%), Positives = 144/358 (40%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
+ C H + ++G + WG+ + G+LG G + P + ++ I+ G
Sbjct: 104 IGISCGLFHS-GLTIDGDLWIWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGL 162
Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR-CLVSEVTATACGADFTVWLSSV 179
H+V +T G+ +G+ G LG E+ P V +++A A T ++
Sbjct: 163 HSVALTHQGDVFTWGYGGFGALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTAAIT-- 220
Query: 180 EGASILNAGLPQY-GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGT 238
E + G + G+LG G N + + + P + AL + V+CG
Sbjct: 221 ESGELYMWGREEGDGRLGLGPGRGPN-EGGGLSV-------PSKVKALT-VPVASVSCGG 271
Query: 239 NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSS 298
T+A+ +G ++ WG LG + W P V + + I+ G +S
Sbjct: 272 FFTMALTKEGQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQ----IACGGYHSL 327
Query: 299 CTAGGGQLYMWG-----KLKNNG-DDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI 352
G++ WG +L ++ + P + L+ + + SG D +
Sbjct: 328 ALTEEGKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAITDGGEL 387
Query: 353 -SWGHAQYGELGYGPYGQKSSAMPKKVDIL------EGMHVISVACGYGHSLVIVDRT 403
WG+A+ +LG P + P +V+ L + VIS++ G H+L +V R+
Sbjct: 388 WMWGNAKDFQLGV-PGLPEIQTTPVEVNFLTEEDECQPHKVISISIGASHALCLVSRS 444
Score = 55 (24.4 bits), Expect = 8.4e-14, Sum P(2) = 8.4e-14
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSEL 107
++WGR GQLG G + R P+ V+ L
Sbjct: 51 FSWGRGASGQLGGGIEEIRMYPSPVANL 78
>UNIPROTKB|E2QYQ5 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR017986 InterPro:IPR000569
InterPro:IPR001680 InterPro:IPR003877 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00622 PROSITE:PS50082 PROSITE:PS50237
PROSITE:PS50294 SMART:SM00119 SMART:SM00320 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016567 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449
PROSITE:PS50188 SUPFAM:SSF56204 OMA:HHYQDGI
GeneTree:ENSGT00700000104312 EMBL:AAEX03016202
Ensembl:ENSCAFT00000026962 Uniprot:E2QYQ5
Length = 4863
Score = 266 (98.7 bits), Expect = 2.1e-19, P = 2.1e-19
Identities = 95/331 (28%), Positives = 153/331 (46%)
Query: 22 LLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSC-HCVAVDVEGRCY 80
+L CG + +G+ G D +L T + L G + + C S H +A+ G +
Sbjct: 4049 VLACGEGSYGRLGQ--GNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4105
Query: 81 TWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
+WG + G+LGHG+ ++ RP + L ++ + G H+ VVT DG FG +G
Sbjct: 4106 SWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYG 4165
Query: 141 QLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
+LG G+ N+ P V L ++ ACG + T+ +S+ +G+ + G YG+LG G
Sbjct: 4166 RLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSMVWAFGDGDYGKLGLGN 4224
Query: 200 DNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG----F 255
+T SS P+ + L G I KVACGT +VA+ G+VYT+G
Sbjct: 4225 ----STAKSS----------PQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLI 4270
Query: 256 G-GYGRLGHREQKDEWVPRRVDVFQRNNVLPPE---AVISAGSVNSSCTAGGGQLYMWGK 311
G GR + + +P V + + E A+ S G V + + GQL + G
Sbjct: 4271 GLPEGR-ARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL-GH 4328
Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
+ + P + L G N+R + +G H
Sbjct: 4329 TNHVRE----PTLVTVLQGKNIRQISAGRCH 4355
Score = 251 (93.4 bits), Expect = 1.7e-24, Sum P(2) = 1.7e-24
Identities = 81/277 (29%), Positives = 134/277 (48%)
Query: 134 FGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
+G +HGQL RN + P+ S+ CG + T + + ++L G YG
Sbjct: 4003 WGAGRHGQLAEAG-RNVMVPAAAPSF-SQAQQVICGQNCTFVIQA--NGTVLACGEGSYG 4058
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV--ACGTN-HTVAVDSKGYV 250
+LG G N+ D V I+AL G + ++ +CG++ H++A+ G V
Sbjct: 4059 RLGQG-----NSDDLHVLTV---------ISALQGFVVTQLVTSCGSDGHSMALTESGEV 4104
Query: 251 YTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM-- 308
++WG G YG+LGH + PR+++ Q V+ +S G +S+ G+L+
Sbjct: 4105 FSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQ----MSCGFKHSAVVTSDGKLFTFG 4160
Query: 309 ---WGKLK-NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGEL 362
+G+L N + P+ + L G+ + + G H V AD S + ++G YG+L
Sbjct: 4161 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKL 4220
Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G G KSS P+KVD+L G+ + VACG S+ +
Sbjct: 4221 GLGNSTAKSS--PQKVDVLCGIGIKKVACGTQFSVAL 4255
Score = 248 (92.4 bits), Expect = 2.9e-17, P = 2.9e-17
Identities = 85/353 (24%), Positives = 148/353 (41%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD---RPTIVSELSKYKIK 113
D + + AG C V + +G G+ G+LG GD + + T S K+
Sbjct: 404 DAQTIEAGQY-CTFV-ISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVS 461
Query: 114 KAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFT 173
+ HT+ T +G ++G +G+LG G+ + P ++ + A +
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYR 521
Query: 174 VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
+ E + G +G+LGHG N N P + ++ + +
Sbjct: 522 HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNI--------------PTLVKDISN--VGE 565
Query: 234 VACGTNHTVAVDSKGYVYTWGFGG---YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVI 290
V+CG++HT+A+ G W FGG G+LGH + + P+ V+ Q + +
Sbjct: 566 VSCGSSHTIALSKDGRT-VWSFGGGDNVGKLGHGDTNRVYKPKVVEALQGMFIRK----V 620
Query: 291 SAGSVNSSCTAGGGQLYMWG--KLKNNGDDW---MYPKPLMDLSGWNLRCMDSGNMHHFV 345
AGS +S GQ+Y WG G + PK + +L+ + + G+ H ++
Sbjct: 621 CAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEELAATRIVDISIGDSHVWL 680
Query: 346 GA-DSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
D+ +WG+ G+ G G PKKV L+G+ + ++ G HSL
Sbjct: 681 FVMDNEVYAWGNNSMGQCGQGN-STGPITKPKKVSGLDGIAIQQISAGTSHSL 732
Score = 248 (92.4 bits), Expect = 2.7e-16, Sum P(2) = 2.7e-16
Identities = 94/352 (26%), Positives = 155/352 (44%)
Query: 60 FVAAGCVSC--HCV-AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK-- 114
F A V C +C + G G G+LG G+ T++S L + + +
Sbjct: 4027 FSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLV 4086
Query: 115 AGAGRS-HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADF 172
G H++ +TE G ++G +G+LG G+ + P + L E V +CG
Sbjct: 4087 TSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKH 4146
Query: 173 TVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIV 232
+ ++S +G + G YG+LG G NT S+ KL P + AL G I
Sbjct: 4147 SAVVTS-DG-KLFTFGNGDYGRLGLG-----NT--SNKKL-------PERVTALEGYQIG 4190
Query: 233 KVACGTNHTVAVDSKG-YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
+VACG NHT+AV + G V+ +G G YG+LG + P++VDV + ++
Sbjct: 4191 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKK----VA 4246
Query: 292 AGSVNSSCTAGGGQLYMWG--KL----KNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV 345
G+ S G +Y +G +L + + P+ + L+G + + G H
Sbjct: 4247 CGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLA 4306
Query: 346 GADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
A + + +WG G+LG G P V +L+G ++ ++ G HS
Sbjct: 4307 LASTGDVYAWGSNSEGQLGLGHTNHVRE--PTLVTVLQGKNIRQISAGRCHS 4356
Score = 232 (86.7 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 92/334 (27%), Positives = 151/334 (45%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
Y WG N QL G + + +P + LS + AG+ T V++ DG+ A G +
Sbjct: 375 YVWGSNSSHQLVEGTQEKILQPKMA--LSFSDAQTIEAGQYCTFVISTDGSVRACGKGSY 432
Query: 140 GQLGSGSIRNE-----IEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
G+LG G N+ + P R + +V+++ G+D + EG + + G YG+
Sbjct: 433 GRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSSK-GSDGHTLAFTTEG-EVFSWGDGDYGK 489
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTW 253
LGHG +SS Q P+ I L G+ +V V+ G H+ AV G +YTW
Sbjct: 490 LGHG--------NSST------QKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTW 535
Query: 254 GFGGYGRLGHREQKDEWVPRRV-DVFQRNNVLPPEAVISAGSVNSSC--TAGGGQLYMWG 310
G G +GRLGH + +P V D+ V + A S + + GGG G
Sbjct: 536 GEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNV--G 593
Query: 311 KLKNNGDDWMY-PKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYG 368
KL + + +Y PK + L G +R + +G+ + + +WG LG G
Sbjct: 594 KLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCGS-S 650
Query: 369 QKSSAMPKKVDILEGMHVISVACGYGHS-LVIVD 401
+ ++ PK ++ L ++ ++ G H L ++D
Sbjct: 651 EATALRPKLIEELAATRIVDISIGDSHVWLFVMD 684
Score = 208 (78.3 bits), Expect = 7.6e-22, Sum P(2) = 7.6e-22
Identities = 66/214 (30%), Positives = 96/214 (44%)
Query: 52 PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
PL G + V+AG H AV +G YTWG + G+LGHGD R+ PT+V ++S
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN-- 562
Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKH-GQLGSGSIRNEIEPSPVRCLVSEVTATAC- 168
+ + G SHT+ +++DG ++ +FG + G+LG G +P V L C
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNVGKLGHGDTNRVYKPKVVEALQGMFIRKVCA 622
Query: 169 GADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAG 228
G+ ++ L+S G LG G SS A RP+ I LA
Sbjct: 623 GSQSSLALTSTGQVYAWGCG----ACLGCG---------SSEATAL----RPKLIEELAA 665
Query: 229 ETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
IV ++ G +H VY WG G+ G
Sbjct: 666 TRIVDISIGDSHVWLFVMDNEVYAWGNNSMGQCG 699
Score = 204 (76.9 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 78/291 (26%), Positives = 128/291 (43%)
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
+V+E +G N QL G+ ++P + S+ G + ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPK-MALSFSDAQTIEAG-QYCTFVISTDG-S 423
Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
+ G YG+LG G N +T KL +E P R+I ++ K + G HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFE--PH-RSIKKVSSS---KGSDG--HTLA 472
Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
++G V++WG G YG+LGH + P+ + + V+ +SAG +S+
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529
Query: 304 GQLYMWGK----LKNNGDDWM--YPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISW--- 354
G+LY WG+ +GD P + D+S N+ + G+ H + W
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFG 587
Query: 355 GHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
G G+LG+G + PK V+ L+GM + V G SL + V
Sbjct: 588 GGDNVGKLGHGDTNRVYK--PKVVEALQGMFIRKVCAGSQSSLALTSTGQV 636
Score = 149 (57.5 bits), Expect = 3.2e-15, Sum P(2) = 3.2e-15
Identities = 54/202 (26%), Positives = 87/202 (43%)
Query: 46 SPTRLRPLVGVDIRFVA-AGCVSCHCVAVDVEGRC-YTWGRNER-GQLGHGDKIQRDRPT 102
S +R P + DI V C S H +A+ +GR +++G + G+LGHGD + +P
Sbjct: 548 SNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNVGKLGHGDTNRVYKPK 607
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIR-NEIEPSPVRCLVS 161
+V L I+K AG ++ +T G + W LG GS + P + L +
Sbjct: 608 VVEALQGMFIRKVCAGSQSSLALTSTGQ--VYAWGCGACLGCGSSEATALRPKLIEELAA 665
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
D VWL ++ + G GQ G G TK P+
Sbjct: 666 TRIVDISIGDSHVWLFVMDN-EVYAWGNNSMGQCGQGNSTGPITK-------------PK 711
Query: 222 AIAALAGETIVKVACGTNHTVA 243
++ L G I +++ GT+H++A
Sbjct: 712 KVSGLDGIAIQQISAGTSHSLA 733
Score = 140 (54.3 bits), Expect = 7.6e-22, Sum P(2) = 7.6e-22
Identities = 43/156 (27%), Positives = 70/156 (44%)
Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVF-QRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
VY WG G +G+L ++ VP F Q V+ + N + A G Y
Sbjct: 4000 VYLWGAGRHGQLAEAG-RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSY- 4057
Query: 309 WGKL-KNNGDDWMYPKPLMDLSGWNLRCM--DSGNMHHFVGADSS--CISWGHAQYGELG 363
G+L + N DD + L G+ + + G+ H + S SWG YG+LG
Sbjct: 4058 -GRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLG 4116
Query: 364 YGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+G P++++ L+G V+ ++CG+ HS V+
Sbjct: 4117 HG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVV 4150
Score = 116 (45.9 bits), Expect = 1.7e-24, Sum P(2) = 1.7e-24
Identities = 46/139 (33%), Positives = 61/139 (43%)
Query: 26 GSTCW-----DAVGRRKGALDGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
G T W D VG+ G D N V P + L G+ IR V AG S +A+ G+
Sbjct: 580 GRTVWSFGGGDNVGKL-GHGDTNRVYKPKVVEALQGMFIRKVCAGSQSS--LALTSTGQV 636
Query: 80 YTWGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
Y WG LG G + RP ++ EL+ +I G SH + D A+G N
Sbjct: 637 YAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHVWLFVMDNEVYAWGNNS 694
Query: 139 HGQLGSGSIRNEI-EPSPV 156
GQ G G+ I +P V
Sbjct: 695 MGQCGQGNSTGPITKPKKV 713
Score = 87 (35.7 bits), Expect = 1.8e-21, Sum P(2) = 1.8e-21
Identities = 24/90 (26%), Positives = 38/90 (42%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G+ + + P + L I ++ G H ++ Y WG N GQ G G+
Sbjct: 648 GSSEATALRPKLIEELAATRIVDISIG--DSHVWLFVMDNEVYAWGNNSMGQCGQGNSTG 705
Query: 98 R-DRPTIVSELSKYKIKKAGAGRSHTVVVT 126
+P VS L I++ AG SH++ T
Sbjct: 706 PITKPKKVSGLDGIAIQQISAGTSHSLAWT 735
Score = 84 (34.6 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 42/159 (26%), Positives = 63/159 (39%)
Query: 83 GRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQL 142
G + G+LGHGD + +P +V L I+K AG ++ +T G A+G
Sbjct: 588 GGDNVGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGC 647
Query: 143 GSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASIL--NAGLPQYGQ---LG- 196
GS S + P + L + D VWL ++ N + Q GQ G
Sbjct: 648 GS-SEATALRPKLIEELAATRIVDISIGDSHVWLFVMDNEVYAWGNNSMGQCGQGNSTGP 706
Query: 197 -------HGTDN---EYNTKDSSVKLAYEAQPRPRAIAA 225
G D + + +S LA+ A PR R + A
Sbjct: 707 ITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVA 745
Score = 41 (19.5 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 7/19 (36%), Positives = 8/19 (42%)
Query: 69 HCVAVDVEGRCYTWGRNER 87
HC DV C W +R
Sbjct: 3578 HCYRKDVSVTCIAWFSEDR 3596
Score = 40 (19.1 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 11/25 (44%), Positives = 13/25 (52%)
Query: 347 ADSSCISWGHAQYGELGYGPYGQKS 371
AD S + G YG L PYG +S
Sbjct: 913 ADLSSVCTG---YGNLADQPYGTQS 934
Score = 39 (18.8 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 10/36 (27%), Positives = 20/36 (55%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVA 72
+G G + P ++ L G+ I+ ++AG + H +A
Sbjct: 700 QGNSTGPITKPKKVSGLDGIAIQQISAG--TSHSLA 733
>TAIR|locus:2146142 [details] [associations]
symbol:AT5G16040 "AT5G16040" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008536 "Ran GTPase binding" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688 EMBL:AL391145
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 UniGene:At.19750
UniGene:At.49027 EMBL:BT028960 IPI:IPI00525887 PIR:T51387
RefSeq:NP_197108.1 HSSP:O87916 ProteinModelPortal:Q9LFS0 SMR:Q9LFS0
PRIDE:Q9LFS0 EnsemblPlants:AT5G16040.1 GeneID:831461
KEGG:ath:AT5G16040 TAIR:At5g16040 InParanoid:Q9LFS0 OMA:TTGHPME
PhylomeDB:Q9LFS0 ProtClustDB:CLSN2686124 Genevestigator:Q9LFS0
Uniprot:Q9LFS0
Length = 396
Score = 281 (104.0 bits), Expect = 6.7e-24, P = 6.7e-24
Identities = 89/324 (27%), Positives = 149/324 (45%)
Query: 82 WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
WG E GQLG G +++ ++V L + ++ G +++ + +DG +GWN+ G
Sbjct: 10 WGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQRGT 69
Query: 142 LGSG-SIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
LG + E PS V+ L + ++ A G + + +G + G +YGQ G
Sbjct: 70 LGHPPETKTESTPSLVKSLANVKIVQAAIGGWHCLAVDD-QGRAYAWGG-NEYGQCG--- 124
Query: 200 DNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYG 259
E +KD + + P+ A T+ +VA G H+V + +GYV+TWG
Sbjct: 125 --EEPSKDETGRPVRRDIVIPKRCAQQL--TVRQVAAGGTHSVVLTREGYVWTWGQPWPP 180
Query: 260 RLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS-AGSVNSSCTAGGGQLYMWGKLKNNGDD 318
G +Q VP RV + ++ A + A + + A G Y G+L GD
Sbjct: 181 --GDIKQIS--VPVRVQGLENVRLIAVGAFHNLALKEDGTLWAWGNNEY--GQL-GTGDT 233
Query: 319 W--MYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMP 375
YP P+ L L + +G H + + WG ++G LG+G + S +P
Sbjct: 234 QPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLP 293
Query: 376 KKVDILEGMHVISVACGYGHSLVI 399
+KV++L G +I V+CG HS+ +
Sbjct: 294 QKVNLLAGEDIIQVSCGGTHSVAL 317
Score = 235 (87.8 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 78/277 (28%), Positives = 130/277 (46%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DKIQRDRPT-- 102
+P+ ++ L V I A G HC+AVD +GR Y WG NE GQ G K + RP
Sbjct: 81 TPSLVKSLANVKIVQAAIG--GWHCLAVDDQGRAYAWGGNEYGQCGEEPSKDETGRPVRR 138
Query: 103 --IVSE--LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
++ + + +++ AG +H+VV+T +G + W G I+ P V+
Sbjct: 139 DIVIPKRCAQQLTVRQVAAGGTHSVVLTREG----YVWTWGQPWPPGDIKQISVPVRVQG 194
Query: 159 LVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP 218
L V A GA + L E ++ G +YGQLG G + QP
Sbjct: 195 L-ENVRLIAVGAFHNLALK--EDGTLWAWGNNEYGQLGTG----------------DTQP 235
Query: 219 R--PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH--REQKDEWVPRR 274
R P + L T+V +A G H+ A+ ++G VY WG G +GRLG ++ + +P++
Sbjct: 236 RSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQK 295
Query: 275 VDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
V++ +++ +S G +S G+++ +G+
Sbjct: 296 VNLLAGEDIIQ----VSCGGTHSVALTRDGRIFSFGR 328
Score = 220 (82.5 bits), Expect = 9.8e-16, P = 9.8e-16
Identities = 79/280 (28%), Positives = 120/280 (42%)
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
+A+G + GQLG G+ + S V L + G L+ + + G Q
Sbjct: 8 IAWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNS-LAICDDGKLFTWGWNQ 66
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
G LGH + TK S P + +LA IV+ A G H +AVD +G Y
Sbjct: 67 RGTLGHPPE----TKTEST---------PSLVKSLANVKIVQAAIGGWHCLAVDDQGRAY 113
Query: 252 TWGFGGYGRLGHREQKDEWV-PRRVDVFQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYM 308
WG YG+ G KDE P R D+ V ++AG +S G ++
Sbjct: 114 AWGGNEYGQCGEEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTREGYVWT 173
Query: 309 WGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPY 367
WG+ GD P+ N+R + G H+ + D + +WG+ +YG+LG G
Sbjct: 174 WGQPWPPGDIKQISVPVRVQGLENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDT 233
Query: 368 GQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGE 407
+S +P V L+ + ++ +A G HS + TN GE
Sbjct: 234 QPRSYPIP--VQGLDDLTLVDIAAGGWHSTAL---TNEGE 268
Score = 209 (78.6 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 101/371 (27%), Positives = 159/371 (42%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTIVSELSKYKIKKA 115
++R V G S + +A+ +G+ +TWG N+RG LGH + + + P++V L+ KI +A
Sbjct: 39 NVRSVVGG--SRNSLAICDDGKLFTWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQA 96
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVW 175
G H + V + G + A+G N++GQ G ++E PVR + V C TV
Sbjct: 97 AIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPSKDETG-RPVRRDI--VIPKRCAQQLTVR 153
Query: 176 LSSVEGA-SIL--NAGLP-QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
+ G S++ G +GQ D K SV P + L E +
Sbjct: 154 QVAAGGTHSVVLTREGYVWTWGQPWPPGD----IKQISV---------PVRVQGL--ENV 198
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV-- 289
+A G H +A+ G ++ WG YG+LG + + P V ++ A
Sbjct: 199 RLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTLVDIAAGGW 258
Query: 290 ISAGSVNSSCTAGGGQLYMWGKL---KNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-V 345
S N G G+ G+L N+ M P+ + L+G ++ + G H +
Sbjct: 259 HSTALTNEGEVYGWGR-GEHGRLGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSVAL 317
Query: 346 GADSSCISWGHAQYGELGYG---PYGQKSSAMPKKVDILEGM--HV--------IS--VA 390
D S+G +G LGYG GQ +P + EG H I+ VA
Sbjct: 318 TRDGRIFSFGRGDHGRLGYGRKVTTGQPLE-LPIHIPPPEGRFNHTDEEDDGKWIAKHVA 376
Query: 391 CGYGHSLVIVD 401
CG H+L IV+
Sbjct: 377 CGGRHTLAIVE 387
Score = 195 (73.7 bits), Expect = 8.0e-13, P = 8.0e-13
Identities = 63/206 (30%), Positives = 94/206 (45%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P R++ L V R +A G H +A+ +G + WG NE GQLG GD R P V
Sbjct: 189 PVRVQGLENV--RLIAVGAF--HNLALKEDGTLWAWGNNEYGQLGTGDTQPRSYPIPVQG 244
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI--RNEIEPSPVRCLVSE-V 163
L + AG H+ +T +G +G +HG+LG G +++ P V L E +
Sbjct: 245 LDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDI 304
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
+CG +V L+ +G I + G +G+LG+G T ++L P
Sbjct: 305 IQVSCGGTHSVALTR-DGR-IFSFGRGDHGRLGYGRKV---TTGQPLELPIHIPPPEGRF 359
Query: 224 AALA----GETIVK-VACGTNHTVAV 244
G+ I K VACG HT+A+
Sbjct: 360 NHTDEEDDGKWIAKHVACGGRHTLAI 385
>UNIPROTKB|E1BAV2 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007283 "spermatogenesis" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0007283 GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:26091 KO:K10615 OMA:KLVIQPT
EMBL:DAAA02061808 EMBL:DAAA02061809 EMBL:DAAA02061810
IPI:IPI00839181 RefSeq:NP_001070362.2 UniGene:Bt.15687
Ensembl:ENSBTAT00000018639 GeneID:533336 KEGG:bta:533336
NextBio:20876005 ArrayExpress:E1BAV2 Uniprot:E1BAV2
Length = 1057
Score = 287 (106.1 bits), Expect = 1.7e-23, P = 1.7e-23
Identities = 85/277 (30%), Positives = 124/277 (44%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DKIQRDRPTIVSELSKYKIKKA 115
DI+ V C H +A+ + WG+N+ GQLG G D ++ P ++ L +
Sbjct: 136 DIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQI 195
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTV 174
AG +H+ V+T G +G NK GQLG + P+ ++ L ++ CG D T
Sbjct: 196 AAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTA 255
Query: 175 WLSSVEGASILNAGLPQYGQLGHG-TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
L+ G AG YGQLGH T +E N PR + L G + +
Sbjct: 256 ALTKEGGVFTFGAG--GYGQLGHNSTSHEIN---------------PRKVFELMGSIVTQ 298
Query: 234 VACGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV--DVFQRNNVLPPEAVI 290
+ACG HT A V S G +Y++G GG G+LG + P V + F N PP+
Sbjct: 299 IACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFPYNGQCPPDFDS 358
Query: 291 SAGSVNSSCTAGGGQLYM-WGKLKNNG--DDWMYPKP 324
+GG Q + + +N G DD+ YP P
Sbjct: 359 EEYFCVKRIFSGGDQSFSHYSNPQNCGPPDDFRYPDP 395
Score = 264 (98.0 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 82/276 (29%), Positives = 135/276 (48%)
Query: 48 TRLRP--LVGVDIR-FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTI 103
+R +P +V +D + VA C H +A++ +G+ Y WG + GQLG + R P
Sbjct: 71 SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRN 130
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCLVS- 161
+ LS +I + G H++ +++ +G NK+GQLG G + + P ++ L+
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGI 190
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
A G + L+ + GA I G ++GQLG +N D V P
Sbjct: 191 PFMQIAAGGAHSFVLT-LSGA-IFGWGRNKFGQLGLNDEN-----DRYV---------PN 234
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
+ +L + IV + CG +HT A+ +G V+T+G GGYG+LGH E PR+V F+
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELM 292
Query: 282 NVLPPEAVISAGSVNSSC-TAGGGQLYMWGKLKNNG 316
+ + I+ G ++S G++Y +G L NG
Sbjct: 293 GSIVTQ--IACGRQHTSAFVPSSGRIYSFG-LGGNG 325
Score = 219 (82.2 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 62/178 (34%), Positives = 84/178 (47%)
Query: 29 CW--DAVGRRKGALD-GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRN 85
CW + G+ +D SP ++ L+G+ +AAG H + + G + WGRN
Sbjct: 160 CWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAG--GAHSFVLTLSGAIFGWGRN 217
Query: 86 ERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG 145
+ GQLG D+ R P ++ L KI G HT +T++G FG +GQLG
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277
Query: 146 SIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG-TDN 201
S +EI P V L+ S VT ACG T G I + GL GQLG G T N
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGR-IYSFGLGGNGQLGTGSTSN 334
Score = 208 (78.3 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 92/328 (28%), Positives = 140/328 (42%)
Query: 82 WGRNERGQLGHGDKIQRD---RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
WG GQLG G I + P K++ G G HTV V +DG G N
Sbjct: 4 WGNASFGQLGLGG-IDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCND 62
Query: 139 HGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
GQLG R + P V L ++ + A +CG T+ L+ +G + GL GQLG
Sbjct: 63 LGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALND-KG-QVYAWGLDSDGQLGL 118
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
E +++ PR I +L+ IV+VACG H++A+ V+ WG
Sbjct: 119 LGSEE------CIRV-------PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165
Query: 258 YGRLGHR-EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVN--SSCTAGGGQLYMWGKLKN 314
YG+LG + K + P+ + + A + V S G G+ +G+L
Sbjct: 166 YGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGR-NKFGQLGL 224
Query: 315 NGDDWMY-PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSS 372
N ++ Y P L L + + G H + + ++G YG+LG+ + +
Sbjct: 225 NDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN 284
Query: 373 AMPKKVDILEGMHVISVACGYGHSLVIV 400
P+KV L G V +ACG H+ V
Sbjct: 285 --PRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 192 (72.6 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 70/284 (24%), Positives = 114/284 (40%)
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRC-LVSEVTATACGADFTVWLSSVEGASILNAGLP 190
L +G GQLG G I EI P + G + ++ ++ G
Sbjct: 2 LCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCN 61
Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
GQLGH + S K +P + AL + IV V+CG HT+A++ KG V
Sbjct: 62 DLGQLGH---------EKSRK-------KPEQVVALDAQNIVAVSCGEAHTLALNDKGQV 105
Query: 251 YTWGFGGYGRLGHREQKD-EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
Y WG G+LG ++ VPR + ++ ++ G +S + +++ W
Sbjct: 106 YAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQ----VACGYYHSLALSKASEVFCW 161
Query: 310 GKLKNN----GDDWMY---PKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGE 361
G+ K G D P+ + L G + +G H FV S I WG ++G+
Sbjct: 162 GQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 362 LGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG + +P + L ++ + CG H+ + V
Sbjct: 222 LGLND--ENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGV 263
Score = 136 (52.9 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 37/112 (33%), Positives = 49/112 (43%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P L+ L I ++ G H A+ EG +T+G GQLGH P V E
Sbjct: 233 PNLLKSLRTQKIVYICCG--EDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 290
Query: 107 LSKYKIKKAGAGRSHT-VVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
L + + GR HT V G +FG +GQLG+GS N P V+
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
>ZFIN|ZDB-GENE-030131-7951 [details] [associations]
symbol:rcbtb1 "regulator of chromosome
condensation (RCC1) and BTB (POZ) domain containing protein 1"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651
PROSITE:PS50097 SMART:SM00225 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-030131-7951 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
CTD:55213 HOVERGEN:HBG053261 KO:K11494 HSSP:O87916 EMBL:BC045877
IPI:IPI00503126 RefSeq:NP_956285.1 UniGene:Dr.5968
ProteinModelPortal:Q7ZVG0 GeneID:336007 KEGG:dre:336007
InParanoid:Q7ZVG0 NextBio:20811137 ArrayExpress:Q7ZVG0
Uniprot:Q7ZVG0
Length = 531
Score = 284 (105.0 bits), Expect = 2.1e-23, P = 2.1e-23
Identities = 80/272 (29%), Positives = 132/272 (48%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
++P +L L G + ++ G H + V +G Y WG N QLG+G Q P +V
Sbjct: 63 IAPKKLDCLSGKKLISLSYGS-GPHVLLVTEDGELYAWGHNGYSQLGNGTTNQGVSPILV 121
Query: 105 S-ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCLVSE 162
S L ++ + G H++ +T +G A+G+N GQ+GSGS N+ P V CL ++
Sbjct: 122 STNLQGKRVTEVSCGSHHSLALTHEGEVFAWGYNNCGQVGSGSTANQPTPRKVSNCLQNK 181
Query: 163 VTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
V ACG T ++ + + G GQLG G N N Q P
Sbjct: 182 VIVNIACGQ--TSSMAVTDNGEVYGWGYNGNGQLGLG--NNGN------------QLTPC 225
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
+ AL G ++++A G H++A+ +G +Y WG YG+LG + ++ P +V + ++
Sbjct: 226 RLIALQGFCVLQIASGYAHSLALTDEGLLYAWGANTYGQLGTGNKSNQLSPVQV-MTEKE 284
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
++ A S + S+ GQ+YMWG+ +
Sbjct: 285 RIVEIAACHSTHT--SAAKTQSGQVYMWGQCR 314
Score = 244 (91.0 bits), Expect = 3.8e-18, P = 3.8e-18
Identities = 83/310 (26%), Positives = 146/310 (47%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
T++S I++A GA + + +T D G N LG+G ++ I P + C
Sbjct: 11 TLLSAQELSSIRQACIFGASANEAIYITHDDEVYVLGLNCSNCLGTGDSQSTIAPKKLDC 70
Query: 159 LVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L + + + + G+ V L + +G + G Y QLG+GT N+ V
Sbjct: 71 LSGKKLISLSYGSGPHVLLVTEDG-ELYAWGHNGYSQLGNGTTNQ------GVS------ 117
Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P ++ L G+ + +V+CG++H++A+ +G V+ WG+ G++G ++ PR+V
Sbjct: 118 --PILVSTNLQGKRVTEVSCGSHHSLALTHEGEVFAWGYNNCGQVGSGSTANQPTPRKVS 175
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLS 329
+N V+ I+ G +S G++Y WG L NNG+ + P L+ L
Sbjct: 176 NCLQNKVI---VNIACGQTSSMAVTDNGEVYGWGYNGNGQLGLGNNGNQ-LTPCRLIALQ 231
Query: 330 GWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAM-PKKVDILEGMHVI 387
G+ + + SG H D + +WG YG+LG G KS+ + P +V + E ++
Sbjct: 232 GFCVLQIASGYAHSLALTDEGLLYAWGANTYGQLGTG---NKSNQLSPVQV-MTEKERIV 287
Query: 388 SVA-CGYGHS 396
+A C H+
Sbjct: 288 EIAACHSTHT 297
Score = 231 (86.4 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 75/251 (29%), Positives = 112/251 (44%)
Query: 64 GCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS-HT 122
G + + + + Y G N LG GD P + LS K+ G H
Sbjct: 28 GASANEAIYITHDDEVYVLGLNCSNCLGTGDSQSTIAPKKLDCLSGKKLISLSYGSGPHV 87
Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVE 180
++VTEDG A+G N + QLG+G+ + P V + VT +CG+ ++ L+ E
Sbjct: 88 LLVTEDGELYAWGHNGYSQLGNGTTNQGVSPILVSTNLQGKRVTEVSCGSHHSLALTH-E 146
Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA-ALAGETIVKVACGTN 239
G + G GQ+G G+ T + QP PR ++ L + IV +ACG
Sbjct: 147 G-EVFAWGYNNCGQVGSGS-----TAN---------QPTPRKVSNCLQNKVIVNIACGQT 191
Query: 240 HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSC 299
++AV G VY WG+ G G+LG ++ P R+ Q VL I++G +S
Sbjct: 192 SSMAVTDNGEVYGWGYNGNGQLGLGNNGNQLTPCRLIALQGFCVLQ----IASGYAHSLA 247
Query: 300 TAGGGQLYMWG 310
G LY WG
Sbjct: 248 LTDEGLLYAWG 258
Score = 167 (63.8 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 58/219 (26%), Positives = 93/219 (42%)
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN-HTVAVDSKGYVYTW 253
LG N T DS +A P+ + L+G+ ++ ++ G+ H + V G +Y W
Sbjct: 46 LGLNCSNCLGTGDSQSTIA------PKKLDCLSGKKLISLSYGSGPHVLLVTEDGELYAW 99
Query: 254 GFGGYGRLGHREQKDEWVPRRVDV-FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKL 312
G GY +LG+ P V Q V +S GS +S G+++ WG
Sbjct: 100 GHNGYSQLGNGTTNQGVSPILVSTNLQGKRVTE----VSCGSHHSLALTHEGEVFAWGYN 155
Query: 313 K----NNGDDWMYPKP------LMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGEL 362
+G P P L + N+ C + +M V + WG+ G+L
Sbjct: 156 NCGQVGSGSTANQPTPRKVSNCLQNKVIVNIACGQTSSMA--VTDNGEVYGWGYNGNGQL 213
Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
G G G + + P ++ L+G V+ +A GY HSL + D
Sbjct: 214 GLGNNGNQLT--PCRLIALQGFCVLQIASGYAHSLALTD 250
>MGI|MGI:1918580 [details] [associations]
symbol:Rcbtb1 "regulator of chromosome condensation (RCC1)
and BTB (POZ) domain containing protein 1" species:10090 "Mus
musculus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] InterPro:IPR000210 InterPro:IPR013069
Pfam:PF00651 PROSITE:PS50097 SMART:SM00225 MGI:MGI:1918580
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0006355 GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0007049 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GeneTree:ENSGT00700000104208 CTD:55213 HOGENOM:HOG000065752
HOVERGEN:HBG053261 KO:K11494 OrthoDB:EOG4MSCXX EMBL:AK033501
EMBL:AK088299 EMBL:BC067005 IPI:IPI00469440 RefSeq:NP_082040.2
UniGene:Mm.234195 ProteinModelPortal:Q6NXM2 SMR:Q6NXM2
IntAct:Q6NXM2 STRING:Q6NXM2 PhosphoSite:Q6NXM2 PaxDb:Q6NXM2
PRIDE:Q6NXM2 Ensembl:ENSMUST00000022551 Ensembl:ENSMUST00000043227
GeneID:71330 KEGG:mmu:71330 UCSC:uc007ueb.2 InParanoid:Q6NXM2
NextBio:333557 Bgee:Q6NXM2 Genevestigator:Q6NXM2
GermOnline:ENSMUSG00000035469 Uniprot:Q6NXM2
Length = 531
Score = 283 (104.7 bits), Expect = 3.0e-23, P = 3.0e-23
Identities = 81/270 (30%), Positives = 126/270 (46%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-IVS 105
P +L L G I+ ++ G H + +G Y WG N QLG+G Q P + +
Sbjct: 65 PKKLEALCGKKIKSLSYGS-GPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCT 123
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCL-VSEV 163
L ++ + G H++ + DG A+G+N GQ+GSGS N+ P V CL V
Sbjct: 124 NLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRV 183
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
ACG T ++ ++ + G GQLG G N N Q P +
Sbjct: 184 VNIACGQ--TSSMAVLDSGEVYGWGYNGNGQLGLG--NNGN------------QLTPVRV 227
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
AAL G + ++ CG HT+A+ +G +Y WG YG+LG + + P ++ V ++ V
Sbjct: 228 AALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQIMV-EKERV 286
Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
+ A S + S+ GG +YMWG+ +
Sbjct: 287 IEIAACHSTHT--SAAKTQGGHVYMWGQCR 314
Score = 217 (81.4 bits), Expect = 5.2e-15, P = 5.2e-15
Identities = 78/268 (29%), Positives = 113/268 (42%)
Query: 48 TRLRPLVGVDIRFVAA-GCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
T L P IR G + + V + +G N LG GD P +
Sbjct: 11 TLLSPQEAGSIRKACVFGTSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEA 70
Query: 107 LSKYKIKKAGAGRS-HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV--RCLVSEV 163
L KIK G H ++ TEDG A+G N + QLG+G+ I P V L+ +V
Sbjct: 71 LCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQV 130
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
ACG+ ++ L++ +G + G GQ+G G+ T + QP PR +
Sbjct: 131 IEVACGSHHSMALAA-DG-ELFAWGYNNCGQVGSGS-----TAN---------QPTPRKV 174
Query: 224 A-ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
L + +V +ACG ++AV G VY WG+ G G+LG ++ P RV
Sbjct: 175 TNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHGMC 234
Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYMWG 310
V I G ++ G LY WG
Sbjct: 235 VNQ----IVCGYAHTLALTDEGLLYAWG 258
Score = 215 (80.7 bits), Expect = 8.8e-15, P = 8.8e-15
Identities = 77/309 (24%), Positives = 142/309 (45%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
T++S I+KA G + + VT++ FG N LG+G ++ + P +
Sbjct: 11 TLLSPQEAGSIRKACVFGTSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEA 70
Query: 159 LVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L + + + + G+ V L++ +G + G Y QLG+GT N+ +A
Sbjct: 71 LCGKKIKSLSYGSGPHVLLTTEDGV-VYAWGHNGYSQLGNGTTNQ--------GIA---- 117
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV-D 276
P + L + +++VACG++H++A+ + G ++ WG+ G++G ++ PR+V +
Sbjct: 118 P-VQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTN 176
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLS 329
V+ I+ G +S G++Y WG L NNG+ + P + L
Sbjct: 177 CLHTKRVVN----IACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQ-LTPVRVAALH 231
Query: 330 GWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVIS 388
G + + G H D + +WG YG+LG G + + P ++ ++E VI
Sbjct: 232 GMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG--SKNNLLSPTQI-MVEKERVIE 288
Query: 389 VA-CGYGHS 396
+A C H+
Sbjct: 289 IAACHSTHT 297
Score = 182 (69.1 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 55/194 (28%), Positives = 85/194 (43%)
Query: 220 PRAIAALAGETIVKVACGTN-HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
P+ + AL G+ I ++ G+ H + G VY WG GY +LG+ P +V
Sbjct: 65 PKKLEALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCT- 123
Query: 279 QRNNVLPPEAV-ISAGSVNSSCTAGGGQLYMWGKLK----NNGDDWMYPKP------LMD 327
N+L + + ++ GS +S A G+L+ WG +G P P L
Sbjct: 124 ---NLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHT 180
Query: 328 LSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
N+ C + +M V WG+ G+LG G G + + P +V L GM V
Sbjct: 181 KRVVNIACGQTSSMA--VLDSGEVYGWGYNGNGQLGLGNNGNQLT--PVRVAALHGMCVN 236
Query: 388 SVACGYGHSLVIVD 401
+ CGY H+L + D
Sbjct: 237 QIVCGYAHTLALTD 250
Score = 118 (46.6 bits), Expect = 0.00060, P = 0.00060
Identities = 45/148 (30%), Positives = 62/148 (41%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
+GN ++P R+ L G+ + + G H +A+ EG Y WG N GQLG G K
Sbjct: 218 NGNQLTPVRVAALHGMCVNQIVCGYA--HTLALTDEGLLYAWGANTYGQLGTGSKNNLLS 275
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR-CL 159
PT + + I+ A +HT G + + W GQ S+ I P C
Sbjct: 276 PTQIMVEKERVIEIAACHSTHTSAAKTQGGHV-YMW---GQCRGQSV---ILPHLTHFCC 328
Query: 160 VSEVTATAC-GADFTVW-LSSVEGASIL 185
+V A C G W L SVE L
Sbjct: 329 TDDVFA--CFGTPAVSWRLLSVEHEDFL 354
>UNIPROTKB|I3LCV3 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104208 OMA:NCSNCLG
EMBL:FP325140 Ensembl:ENSSSCT00000023143 Uniprot:I3LCV3
Length = 560
Score = 283 (104.7 bits), Expect = 3.6e-23, P = 3.6e-23
Identities = 81/270 (30%), Positives = 127/270 (47%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-IVS 105
P +L L G I+ ++ G H + +G Y WG N QLG+G Q P + +
Sbjct: 94 PKKLEALCGKKIKSLSYGS-GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCT 152
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCL-VSEV 163
L ++ + G H++ + DG A+G+N GQ+GSGS N+ P V CL + V
Sbjct: 153 NLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRV 212
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
+ ACG T ++ ++ + G GQLG G N N Q P +
Sbjct: 213 VSIACGQ--TSSMAVLDNGEVYGWGYNGNGQLGLG--NNGN------------QLTPVRV 256
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
AAL + ++ CG HT+A+ +G +Y WG YG+LG + + P + V ++ V
Sbjct: 257 AALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV-EKERV 315
Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
+ A SA + S+ GG +YMWG+ +
Sbjct: 316 VEIAACHSAHT--SAAKTQGGHVYMWGQCR 343
Score = 216 (81.1 bits), Expect = 7.6e-15, P = 7.6e-15
Identities = 71/235 (30%), Positives = 107/235 (45%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS-HTVVVTEDGNSLAFGWNK 138
+ +G N LG GD P + L KIK G H ++ TEDG A+G N
Sbjct: 73 FVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNG 132
Query: 139 HGQLGSGSIRNEIEPSPV--RCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
+ QLG+G+ I P V L+ +V ACG+ ++ L++ +G + G GQ+G
Sbjct: 133 YSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAA-DG-EVFAWGYNNCGQVG 190
Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIA-ALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
G+ T + QP PR + L + +V +ACG ++AV G VY WG+
Sbjct: 191 SGS-----TAN---------QPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGY 236
Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
G G+LG ++ P RV ++V + V G ++ G LY WG
Sbjct: 237 NGNGQLGLGNNGNQLTPVRVAAL--HSVCVNQIV--CGYAHTLALTDEGLLYAWG 287
Score = 213 (80.0 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 80/311 (25%), Positives = 141/311 (45%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
T++S I+KA G + + VT++ FG N LG+G ++ + P +
Sbjct: 40 TLLSPQEIASIRKACVFGTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEA 99
Query: 159 LVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L + + + + G+ V LS+ +G + G Y QLG+GT N+ +A
Sbjct: 100 LCGKKIKSLSYGSGPHVLLSTEDGV-VYAWGHNGYSQLGNGTTNQ--------GIA---- 146
Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P + L + +V+VACG++H++A+ + G V+ WG+ G++G ++ PR+V
Sbjct: 147 --PIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKV- 203
Query: 277 VFQRNNVLPPEAVIS--AGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMD 327
N L + V+S G +S G++Y WG L NNG+ + P +
Sbjct: 204 ----TNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ-LTPVRVAA 258
Query: 328 LSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHV 386
L + + G H D + +WG YG+LG G K++ + ++E V
Sbjct: 259 LHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG---NKNNLLSPAHIMVEKERV 315
Query: 387 ISVA-CGYGHS 396
+ +A C H+
Sbjct: 316 VEIAACHSAHT 326
Score = 168 (64.2 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 51/192 (26%), Positives = 86/192 (44%)
Query: 220 PRAIAALAGETIVKVACGTN-HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
P+ + AL G+ I ++ G+ H + G VY WG GY +LG+ P +V
Sbjct: 94 PKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCT- 152
Query: 279 QRNNVLPPEAV-ISAGSVNSSCTAGGGQLYMWGKLK----NNGDDWMYPKPLMDLSGWNL 333
N+L + V ++ GS +S A G+++ WG +G P P + ++
Sbjct: 153 ---NLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHI 209
Query: 334 RCMDS---GNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
+ + S G D+ + WG+ G+LG G G + + P +V L + V +
Sbjct: 210 KRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLT--PVRVAALHSVCVNQI 267
Query: 390 ACGYGHSLVIVD 401
CGY H+L + D
Sbjct: 268 VCGYAHTLALTD 279
>RGD|1308467 [details] [associations]
symbol:Rcbtb1 "regulator of chromosome condensation (RCC1) and
BTB (POZ) domain containing protein 1" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=IEA;ISO]
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 RGD:1308467 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:CH474049
GeneTree:ENSGT00700000104208 CTD:55213 KO:K11494 OMA:NCSNCLG
OrthoDB:EOG4MSCXX IPI:IPI00364409 RefSeq:NP_001101850.1
UniGene:Rn.229110 Ensembl:ENSRNOT00000037800 GeneID:361050
KEGG:rno:361050 UCSC:RGD:1308467 NextBio:675026 Uniprot:D4AD40
Length = 531
Score = 282 (104.3 bits), Expect = 4.3e-23, P = 4.3e-23
Identities = 81/270 (30%), Positives = 127/270 (47%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-IVS 105
P +L L G I+ ++ G H + +G Y WG N QLG+G Q P + +
Sbjct: 65 PKKLEALCGKRIKSLSYGS-GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCT 123
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCL-VSEV 163
L ++ + G H++ + DG A+G+N GQ+GSGS N+ P V CL +V
Sbjct: 124 NLLVKQVVEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKKV 183
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
ACG T ++ ++ + G GQLG G N N Q P +
Sbjct: 184 VNIACGQ--TSSMAVLDSGEVYGWGYNGNGQLGLG--NNGN------------QLTPVRV 227
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
AAL G + ++ CG HT+A+ +G +Y WG YG+LG + + P ++ V ++ V
Sbjct: 228 AALHGVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQIMV-EKERV 286
Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
+ A S + S+ GG +YMWG+ +
Sbjct: 287 IEIAACHSTHT--SAAKTQGGHVYMWGQCR 314
Score = 218 (81.8 bits), Expect = 4.0e-15, P = 4.0e-15
Identities = 80/310 (25%), Positives = 141/310 (45%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
T++S I+KA G S + VT+ FG N LG+G ++ + P +
Sbjct: 11 TLLSPQETGSIRKACVFGISASEAIYVTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKLEA 70
Query: 159 LVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L + + + + G+ V LS+ +G + G Y QLG+GT N+ +A
Sbjct: 71 LCGKRIKSLSYGSGPHVLLSTEDGV-VYAWGHNGYSQLGNGTTNQ--------GIA---- 117
Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV- 275
P + L + +V+VACG++H++A+ + G ++ WG+ G++G ++ PR+V
Sbjct: 118 --PIQVCTNLLVKQVVEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVT 175
Query: 276 DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
+ V+ I+ G +S G++Y WG L NNG+ + P + L
Sbjct: 176 NCLHTKKVVN----IACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQ-LTPVRVAAL 230
Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
G + + G H D + +WG YG+LG G + + P ++ ++E VI
Sbjct: 231 HGVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG--SKNNLLSPTQI-MVEKERVI 287
Query: 388 SVA-CGYGHS 396
+A C H+
Sbjct: 288 EIAACHSTHT 297
Score = 217 (81.4 bits), Expect = 5.2e-15, P = 5.2e-15
Identities = 78/268 (29%), Positives = 115/268 (42%)
Query: 48 TRLRPLVGVDIRFVAA-GCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
T L P IR G + + V + +G N LG GD P +
Sbjct: 11 TLLSPQETGSIRKACVFGISASEAIYVTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKLEA 70
Query: 107 LSKYKIKKAGAGRS-HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV--RCLVSEV 163
L +IK G H ++ TEDG A+G N + QLG+G+ I P V LV +V
Sbjct: 71 LCGKRIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLVKQV 130
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
ACG+ ++ L++ +G + G GQ+G G+ T + QP PR +
Sbjct: 131 VEVACGSHHSMALAA-DG-ELFAWGYNNCGQVGSGS-----TAN---------QPTPRKV 174
Query: 224 A-ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
L + +V +ACG ++AV G VY WG+ G G+LG ++ P RV +
Sbjct: 175 TNCLHTKKVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRVAAL--HG 232
Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYMWG 310
V + V G ++ G LY WG
Sbjct: 233 VCVNQIV--CGYAHTLALTDEGLLYAWG 258
Score = 179 (68.1 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 55/194 (28%), Positives = 85/194 (43%)
Query: 220 PRAIAALAGETIVKVACGTN-HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
P+ + AL G+ I ++ G+ H + G VY WG GY +LG+ P +V
Sbjct: 65 PKKLEALCGKRIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCT- 123
Query: 279 QRNNVLPPEAV-ISAGSVNSSCTAGGGQLYMWGKLK----NNGDDWMYPKP------LMD 327
N+L + V ++ GS +S A G+L+ WG +G P P L
Sbjct: 124 ---NLLVKQVVEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHT 180
Query: 328 LSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
N+ C + +M V WG+ G+LG G G + + P +V L G+ V
Sbjct: 181 KKVVNIACGQTSSMA--VLDSGEVYGWGYNGNGQLGLGNNGNQLT--PVRVAALHGVCVN 236
Query: 388 SVACGYGHSLVIVD 401
+ CGY H+L + D
Sbjct: 237 QIVCGYAHTLALTD 250
Score = 118 (46.6 bits), Expect = 0.00060, P = 0.00060
Identities = 32/102 (31%), Positives = 47/102 (46%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
+GN ++P R+ L GV + + G H +A+ EG Y WG N GQLG G K
Sbjct: 218 NGNQLTPVRVAALHGVCVNQIVCGYA--HTLALTDEGLLYAWGANTYGQLGTGSKNNLLS 275
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK-HGQ 141
PT + + I+ A +HT G + + W + GQ
Sbjct: 276 PTQIMVEKERVIEIAACHSTHTSAAKTQGGHV-YMWGQCRGQ 316
>UNIPROTKB|F1PV11 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104208 CTD:55213 KO:K11494 OMA:NCSNCLG
EMBL:AAEX03013105 RefSeq:XP_542558.2 Ensembl:ENSCAFT00000006979
GeneID:485440 KEGG:cfa:485440 Uniprot:F1PV11
Length = 531
Score = 282 (104.3 bits), Expect = 4.3e-23, P = 4.3e-23
Identities = 81/270 (30%), Positives = 126/270 (46%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-IVS 105
P +L L G I+ ++ G H + +G Y WG N QLG+G Q P + +
Sbjct: 65 PKKLEALCGKKIKSLSYGS-GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCT 123
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCL-VSEV 163
L ++ + G H++ + DG A+G+N GQ+GSGS N+ P V CL + V
Sbjct: 124 NLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRV 183
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
ACG T ++ ++ + G GQLG G N N Q P +
Sbjct: 184 VGIACGQ--TSSMAVLDNGEVYGWGYNGNGQLGLG--NNGN------------QLTPVRV 227
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
AAL + ++ CG HT+A+ +G +Y WG YG+LG + + P + V ++ V
Sbjct: 228 AALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV-EKERV 286
Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
+ A SA + S+ GG +YMWG+ +
Sbjct: 287 VEIAACHSAHT--SAAKTQGGHVYMWGQCR 314
Score = 215 (80.7 bits), Expect = 8.8e-15, P = 8.8e-15
Identities = 70/235 (29%), Positives = 105/235 (44%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS-HTVVVTEDGNSLAFGWNK 138
+ +G N LG GD P + L KIK G H ++ TEDG A+G N
Sbjct: 44 FVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNG 103
Query: 139 HGQLGSGSIRNEIEPSPV--RCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
+ QLG+G+ I P V L+ +V ACG+ ++ L++ +G + G GQ+G
Sbjct: 104 YSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAA-DG-EVFAWGYNNCGQVG 161
Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIA-ALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
G+ QP PR + L + +V +ACG ++AV G VY WG+
Sbjct: 162 SGSTTN--------------QPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGY 207
Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
G G+LG ++ P RV ++V + V G ++ G LY WG
Sbjct: 208 NGNGQLGLGNNGNQLTPVRVAAL--HSVCVNQIV--CGYAHTLALTDEGLLYAWG 258
Score = 211 (79.3 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 80/311 (25%), Positives = 141/311 (45%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
T++S I+KA G + + VT++ FG N LG+G ++ + P +
Sbjct: 11 TLLSPQEIASIRKACVFGTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEA 70
Query: 159 LVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L + + + + G+ V LS+ +G + G Y QLG+GT N+ +A
Sbjct: 71 LCGKKIKSLSYGSGPHVLLSTEDGV-VYAWGHNGYSQLGNGTTNQ--------GIA---- 117
Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P + L + +V+VACG++H++A+ + G V+ WG+ G++G ++ PR+V
Sbjct: 118 --PIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTTNQPTPRKV- 174
Query: 277 VFQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMD 327
N L + V I+ G +S G++Y WG L NNG+ + P +
Sbjct: 175 ----TNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ-LTPVRVAA 229
Query: 328 LSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHV 386
L + + G H D + +WG YG+LG G K++ + ++E V
Sbjct: 230 LHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG---NKNNLLSPAHIMVEKERV 286
Query: 387 ISVA-CGYGHS 396
+ +A C H+
Sbjct: 287 VEIAACHSAHT 297
Score = 165 (63.1 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 50/192 (26%), Positives = 85/192 (44%)
Query: 220 PRAIAALAGETIVKVACGTN-HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
P+ + AL G+ I ++ G+ H + G VY WG GY +LG+ P +V
Sbjct: 65 PKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCT- 123
Query: 279 QRNNVLPPEAV-ISAGSVNSSCTAGGGQLYMWGKLK----NNGDDWMYPKPLMDLSGWNL 333
N+L + V ++ GS +S A G+++ WG +G P P + ++
Sbjct: 124 ---NLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHI 180
Query: 334 RCMDS---GNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
+ + G D+ + WG+ G+LG G G + + P +V L + V +
Sbjct: 181 KRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLT--PVRVAALHSVCVNQI 238
Query: 390 ACGYGHSLVIVD 401
CGY H+L + D
Sbjct: 239 VCGYAHTLALTD 250
>UNIPROTKB|E1BKF7 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104208 CTD:55213 KO:K11494
OMA:NCSNCLG EMBL:DAAA02032915 EMBL:DAAA02032914 IPI:IPI00826911
RefSeq:NP_001178141.1 UniGene:Bt.22187 Ensembl:ENSBTAT00000035796
GeneID:785222 KEGG:bta:785222 NextBio:20927167 Uniprot:E1BKF7
Length = 531
Score = 282 (104.3 bits), Expect = 4.3e-23, P = 4.3e-23
Identities = 81/270 (30%), Positives = 126/270 (46%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-IVS 105
P +L L G I+ ++ G H + +G Y WG N QLG+G Q P + +
Sbjct: 65 PKKLEALCGKKIKSLSYGS-GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQVCT 123
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCL-VSEV 163
L ++ + G H++ + DG A+G+N GQ+GSGS N+ P V CL + V
Sbjct: 124 NLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRV 183
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
ACG T ++ ++ + G GQLG G N N Q P +
Sbjct: 184 VGIACGQ--TSSMAVLDNGEVYGWGYNGNGQLGLG--NNGN------------QLTPVRV 227
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
AAL + ++ CG HT+A+ +G +Y WG YG+LG + + P + V ++ V
Sbjct: 228 AALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV-EKERV 286
Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
+ A SA + S+ GG +YMWG+ +
Sbjct: 287 IEIAACHSAHT--SAAKTQGGHVYMWGQCR 314
Score = 212 (79.7 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 70/235 (29%), Positives = 107/235 (45%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS-HTVVVTEDGNSLAFGWNK 138
+ +G N LG GD P + L KIK G H ++ TEDG A+G N
Sbjct: 44 FVFGLNYSSCLGTGDNHSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNG 103
Query: 139 HGQLGSGSIRNEIEPSPV--RCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
+ QLG+G+ + P V L+ +V ACG+ ++ L++ +G + G GQ+G
Sbjct: 104 YSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMALAA-DG-EVFAWGYNNCGQVG 161
Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIA-ALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
G+ T + QP PR + L + +V +ACG ++AV G VY WG+
Sbjct: 162 SGS-----TAN---------QPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGY 207
Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
G G+LG ++ P RV ++V + V G ++ G LY WG
Sbjct: 208 NGNGQLGLGNNGNQLTPVRVAAL--HSVCVNQIV--CGYAHTLALTDEGLLYAWG 258
Score = 211 (79.3 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 82/311 (26%), Positives = 139/311 (44%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
T++S I+KA G + + VT+ FG N LG+G + + P +
Sbjct: 11 TLLSPHEIASIRKACVFGTSANEALYVTDSDEVFVFGLNYSSCLGTGDNHSTLVPKKLEA 70
Query: 159 LVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L + + + + G+ V LS+ +G + G Y QLG+GT N+ LA
Sbjct: 71 LCGKKIKSLSYGSGPHVLLSTEDGV-VYAWGHNGYSQLGNGTTNQ--------GLA---- 117
Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P + L + +V+VACG++H++A+ + G V+ WG+ G++G ++ PR+V
Sbjct: 118 --PIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKV- 174
Query: 277 VFQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMD 327
N L + V I+ G +S G++Y WG L NNG+ + P +
Sbjct: 175 ----TNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ-LTPVRVAA 229
Query: 328 LSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHV 386
L + + G H D + +WG YG+LG G K++ + ++E V
Sbjct: 230 LHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG---NKNNLLSPAHIMVEKERV 286
Query: 387 ISVA-CGYGHS 396
I +A C H+
Sbjct: 287 IEIAACHSAHT 297
Score = 165 (63.1 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 50/192 (26%), Positives = 85/192 (44%)
Query: 220 PRAIAALAGETIVKVACGTN-HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
P+ + AL G+ I ++ G+ H + G VY WG GY +LG+ P +V
Sbjct: 65 PKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQVCT- 123
Query: 279 QRNNVLPPEAV-ISAGSVNSSCTAGGGQLYMWGKLK----NNGDDWMYPKPLMDLSGWNL 333
N+L + V ++ GS +S A G+++ WG +G P P + ++
Sbjct: 124 ---NLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHI 180
Query: 334 RCMDS---GNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
+ + G D+ + WG+ G+LG G G + + P +V L + V +
Sbjct: 181 KRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLT--PVRVAALHSVCVNQI 238
Query: 390 ACGYGHSLVIVD 401
CGY H+L + D
Sbjct: 239 VCGYAHTLALTD 250
>UNIPROTKB|Q8NDN9 [details] [associations]
symbol:RCBTB1 "RCC1 and BTB domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000210 InterPro:IPR013069
Pfam:PF00651 PROSITE:PS50097 SMART:SM00225 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0007049 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 EMBL:AL139321 EMBL:AF334406
EMBL:AJ319660 EMBL:AK096654 EMBL:AL833821 EMBL:BC038104
IPI:IPI00329626 IPI:IPI00973193 RefSeq:NP_060661.3
UniGene:Hs.508021 ProteinModelPortal:Q8NDN9 SMR:Q8NDN9
IntAct:Q8NDN9 MINT:MINT-4718485 STRING:Q8NDN9 PhosphoSite:Q8NDN9
DMDM:74751227 PRIDE:Q8NDN9 DNASU:55213 Ensembl:ENST00000258646
Ensembl:ENST00000378302 Ensembl:ENST00000546015 GeneID:55213
KEGG:hsa:55213 UCSC:uc001vde.1 CTD:55213 GeneCards:GC13M050106
HGNC:HGNC:18243 HPA:HPA045925 MIM:607867 neXtProt:NX_Q8NDN9
PharmGKB:PA134955699 HOGENOM:HOG000065752 HOVERGEN:HBG053261
InParanoid:Q8NDN9 KO:K11494 OMA:NCSNCLG OrthoDB:EOG4MSCXX
PhylomeDB:Q8NDN9 GenomeRNAi:55213 NextBio:59164 ArrayExpress:Q8NDN9
Bgee:Q8NDN9 CleanEx:HS_RCBTB1 Genevestigator:Q8NDN9
GermOnline:ENSG00000136144 Uniprot:Q8NDN9
Length = 531
Score = 282 (104.3 bits), Expect = 4.3e-23, P = 4.3e-23
Identities = 81/270 (30%), Positives = 126/270 (46%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-IVS 105
P +L L G I+ ++ G H + +G Y WG N QLG+G Q P + +
Sbjct: 65 PKKLEGLCGKKIKSLSYGS-GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCT 123
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCL-VSEV 163
L ++ + G H++ + DG A+G+N GQ+GSGS N+ P V CL + V
Sbjct: 124 NLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRV 183
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
ACG T ++ ++ + G GQLG G N N Q P +
Sbjct: 184 VGIACGQ--TSSMAVLDNGEVYGWGYNGNGQLGLG--NNGN------------QLTPVRV 227
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
AAL + ++ CG HT+A+ +G +Y WG YG+LG + + P + V ++ V
Sbjct: 228 AALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV-EKERV 286
Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
+ A SA + S+ GG +YMWG+ +
Sbjct: 287 VEIAACHSAHT--SAAKTQGGHVYMWGQCR 314
Score = 215 (80.7 bits), Expect = 8.8e-15, P = 8.8e-15
Identities = 78/268 (29%), Positives = 116/268 (43%)
Query: 48 TRLRPLVGVDIRFVAA-GCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
T L P IR G + + V + +G N LG GD P +
Sbjct: 11 TLLSPQEIASIRKACVFGTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEG 70
Query: 107 LSKYKIKKAGAGRS-HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV--RCLVSEV 163
L KIK G H ++ TEDG A+G N + QLG+G+ I P V L+ +V
Sbjct: 71 LCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQV 130
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
ACG+ ++ L++ +G + G GQ+G G+ T + QP PR +
Sbjct: 131 VEVACGSHHSMALAA-DG-EVFAWGYNNCGQVGSGS-----TAN---------QPTPRKV 174
Query: 224 A-ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
L + +V +ACG ++AV G VY WG+ G G+LG ++ P RV ++
Sbjct: 175 TNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAAL--HS 232
Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYMWG 310
V + V G ++ G LY WG
Sbjct: 233 VCVNQIV--CGYAHTLALTDEGLLYAWG 258
Score = 212 (79.7 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 81/310 (26%), Positives = 141/310 (45%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
T++S I+KA G S + VT++ FG N LG+G ++ + P +
Sbjct: 11 TLLSPQEIASIRKACVFGTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEG 70
Query: 159 LVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L + + + + G+ V LS+ +G + G Y QLG+GT N+ +A
Sbjct: 71 LCGKKIKSLSYGSGPHVLLSTEDGV-VYAWGHNGYSQLGNGTTNQ--------GIA---- 117
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
P + L + +V+VACG++H++A+ + G V+ WG+ G++G ++ PR+V
Sbjct: 118 P-VQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKV-- 174
Query: 278 FQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
N L + V I+ G +S G++Y WG L NNG+ + P + L
Sbjct: 175 ---TNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ-LTPVRVAAL 230
Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
+ + G H D + +WG YG+LG G K++ + ++E V+
Sbjct: 231 HSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG---NKNNLLSPAHIMVEKERVV 287
Query: 388 SVA-CGYGHS 396
+A C H+
Sbjct: 288 EIAACHSAHT 297
Score = 160 (61.4 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 49/192 (25%), Positives = 84/192 (43%)
Query: 220 PRAIAALAGETIVKVACGTN-HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
P+ + L G+ I ++ G+ H + G VY WG GY +LG+ P +V
Sbjct: 65 PKKLEGLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCT- 123
Query: 279 QRNNVLPPEAV-ISAGSVNSSCTAGGGQLYMWGKLK----NNGDDWMYPKPLMDLSGWNL 333
N+L + V ++ GS +S A G+++ WG +G P P + ++
Sbjct: 124 ---NLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHI 180
Query: 334 RCMDS---GNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
+ + G D+ + WG+ G+LG G G + + P +V L + V +
Sbjct: 181 KRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLT--PVRVAALHSVCVNQI 238
Query: 390 ACGYGHSLVIVD 401
CGY H+L + D
Sbjct: 239 VCGYAHTLALTD 250
>TAIR|locus:505006603 [details] [associations]
symbol:AT5G12350 "AT5G12350" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=ISS] [GO:0008536 "Ran GTPase binding" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009630 "gravitropism" evidence=RCA]
[GO:0009887 "organ morphogenesis" evidence=RCA] [GO:0009888 "tissue
development" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0010638 "positive regulation of
organelle organization" evidence=RCA] [GO:0033044 "regulation of
chromosome organization" evidence=RCA] [GO:0042546 "cell wall
biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045492 "xylan biosynthetic
process" evidence=RCA] InterPro:IPR000306 InterPro:IPR001849
InterPro:IPR024774 Pfam:PF01363 Pfam:PF12814 SMART:SM00064
SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005886
GO:GO:0005938 EMBL:CP002688 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0032065 InterPro:IPR013591 Pfam:PF08381
PROSITE:PS51514 IPI:IPI00540281 RefSeq:NP_568268.3 UniGene:At.22310
UniGene:At.51056 ProteinModelPortal:F4K0X5 SMR:F4K0X5
EnsemblPlants:AT5G12350.1 GeneID:831110 KEGG:ath:AT5G12350
OMA:NTNGHPR Uniprot:F4K0X5
Length = 1075
Score = 283 (104.7 bits), Expect = 1.4e-22, P = 1.4e-22
Identities = 102/367 (27%), Positives = 158/367 (43%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P L + +D++ +A G H V V +G ++WG G+LGHG +P ++
Sbjct: 299 PKALESTIVLDVQNIACG--GQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDA 356
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVT 164
L+ I+ G H+ VT G+ +G G LG G+ + P V L+ V+
Sbjct: 357 LNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVS 416
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
+ ACG T ++S + G +G LGHG D + SV + PR +
Sbjct: 417 SIACGPYHTAVVTSA--GQLFTFGDGTFGVLGHG-DKK------SVFI-------PREVD 460
Query: 225 ALAGETIVKVACGTNHTVAVD------------SKGYVYTWGFGGYGRLGHREQKDEWVP 272
+L G V+ ACG HT AV S G ++TWG G GRLGH ++ + VP
Sbjct: 461 SLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVP 520
Query: 273 RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY-----MWGKLKNNGDDWMYPKPLMD 327
V V P ++ G + G +Y ++G+L N+ D P +
Sbjct: 521 TCVAAL----VEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADGKTPNRVEG 576
Query: 328 -LSGWNLRCMDSGNMHHFV-GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMH 385
L + + G H V + + +WG G LG+G ++S P V+ L+
Sbjct: 577 KLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVDDRNS--PTLVESLKDKQ 634
Query: 386 VISVACG 392
V S+ACG
Sbjct: 635 VKSIACG 641
Score = 267 (99.0 bits), Expect = 2.5e-20, P = 2.5e-20
Identities = 87/292 (29%), Positives = 127/292 (43%)
Query: 27 STCW--DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGR 84
S W ++ GR +D N+ P + L +I VA G H AV + G YTWG+
Sbjct: 329 SFSWGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVACG--EFHSCAVTLSGDLYTWGK 386
Query: 85 NERGQLGHGDKIQRDRPTIVSELSK-YKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG 143
+ G LGHG+++ P V+ L + + G HT VVT G FG G LG
Sbjct: 387 GDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLG 446
Query: 144 SGSIRNEIEPSPVRCLVSEVTA-TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNE 202
G ++ P V L T ACG T + V S ++ G+L D +
Sbjct: 447 HGDKKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSS-GKLFTWGDGD 505
Query: 203 YNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
K E + P +AAL +VACG + TVA+ + G+VYT G YG+LG
Sbjct: 506 KGRLGHGNK---EPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLG 562
Query: 263 HREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
+ D P RV+ + + I+ G+ + + ++Y WGK N
Sbjct: 563 N-SHADGKTPNRVEGKLHKSFVEE---IACGAYHVAVLTSRTEVYTWGKGSN 610
Score = 238 (88.8 bits), Expect = 7.0e-17, P = 7.0e-17
Identities = 100/360 (27%), Positives = 153/360 (42%)
Query: 74 DVEGRCYTWGRN-ERGQLGHGDK-------IQRDR--PTIVSELSKYKIKKAGAGRSHTV 123
D G + WG G LG G++ I+ D P + ++ G H V
Sbjct: 262 DALGDVFIWGEGIGEGVLGGGNRRVGSSFDIKMDSLLPKALESTIVLDVQNIACGGQHAV 321
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVWLSSVEGA 182
+VT+ G S ++G G+LG G N +P + L + + ACG +F ++ G
Sbjct: 322 LVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVACG-EFHSCAVTLSG- 379
Query: 183 SILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTV 242
+ G +G LGHG NE + P+ R L G + +ACG HT
Sbjct: 380 DLYTWGKGDFGVLGHG--NEVS----------HWVPK-RVNFLLEGIHVSSIACGPYHTA 426
Query: 243 AVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ--RN-----NVLPPEAVISA--G 293
V S G ++T+G G +G LGH ++K ++PR VD + R V AV+ G
Sbjct: 427 VVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVG 486
Query: 294 SVNSSCTAGGGQLYMWG-----KLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGA 347
S +SS G+L+ WG +L + N + + P + L N + G+
Sbjct: 487 S-SSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVALT 545
Query: 348 DSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVD-ILEGMHVISVACGYGHSLVIVDRTNV 405
S + + G YG+LG K+ P +V+ L V +ACG H V+ RT V
Sbjct: 546 TSGHVYTMGSPVYGQLGNSHADGKT---PNRVEGKLHKSFVEEIACGAYHVAVLTSRTEV 602
Score = 176 (67.0 bits), Expect = 6.4e-10, P = 6.4e-10
Identities = 54/182 (29%), Positives = 84/182 (46%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G+ +TWG ++G+LGHG+K + PT V+ L + + G S TV +T G+ G
Sbjct: 496 GKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGS 555
Query: 137 NKHGQLGSGSIRNEIEPSPVRCLV--SEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
+GQLG+ + P+ V + S V ACGA L+S + G G+
Sbjct: 556 PVYGQLGNSHADGKT-PNRVEGKLHKSFVEEIACGAYHVAVLTS--RTEVYTWGKGSNGR 612
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LGHG ++ N+ P + +L + + +ACGTN T AV ++ W
Sbjct: 613 LGHGDVDDRNS--------------PTLVESLKDKQVKSIACGTNFTAAV----CIHRWA 654
Query: 255 FG 256
G
Sbjct: 655 SG 656
>FB|FBgn0035207 [details] [associations]
symbol:CG9153 species:7227 "Drosophila melanogaster"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS;IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 HSSP:Q05086 EMBL:AY128479 ProteinModelPortal:Q8MQN4
SMR:Q8MQN4 PaxDb:Q8MQN4 PRIDE:Q8MQN4 FlyBase:FBgn0035207
InParanoid:Q8MQN4 OrthoDB:EOG4WDBSR ChiTaRS:CG9153
ArrayExpress:Q8MQN4 Bgee:Q8MQN4 Uniprot:Q8MQN4
Length = 1058
Score = 281 (104.0 bits), Expect = 3.0e-22, P = 3.0e-22
Identities = 94/337 (27%), Positives = 155/337 (45%)
Query: 80 YTWGRNERGQLGHGDKIQRDR---PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
Y WG GQLG G I+ ++ P+ + +++ G HT+ +T G A G
Sbjct: 8 YCWGSTSHGQLGLGG-IEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGS 66
Query: 137 NKHGQLGSGSIRNEIEPSPVRCLVSE-----VTATACGADFTVWLSSVEGASILNAGLPQ 191
N + QLG +++ P+ L+ E + CG+ ++ LS + +L+ G
Sbjct: 67 NDYSQLG-----HDL-PTKRPLLIPELQDYVIIQICCGSRHSLALS--DWGQVLSWGDND 118
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
GQLGH TD E V+L P+ + L +T+V++ACG NH++A+ S G +Y
Sbjct: 119 CGQLGHATDKEI------VQL-------PKVVRQLVTKTVVQIACGNNHSLALTSCGELY 165
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP-PEAVISAGSVNSSCTAGGGQLYMWG 310
+WG YG+LG D + + +L P A I+ G +S + G ++ WG
Sbjct: 166 SWGSNIYGQLGVNSPND--LTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWG 223
Query: 311 KLK------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELG 363
+ N+ + YP L L +R + G+ F+ + + G YG+LG
Sbjct: 224 RNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLG 283
Query: 364 YGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+G + +P+ V L G + VACG H+L +V
Sbjct: 284 HG--FSSNEMLPRMVMELMGSTITQVACGNRHTLALV 318
Score = 270 (100.1 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 82/248 (33%), Positives = 121/248 (48%)
Query: 34 GRRKGALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG- 91
G+ A D +V P +R LV + V C + H +A+ G Y+WG N GQLG
Sbjct: 120 GQLGHATDKEIVQLPKVVRQLVTKTV--VQIACGNNHSLALTSCGELYSWGSNIYGQLGV 177
Query: 92 --HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
D + P ++ L + G +H+ ++++ G +G N GQLG N
Sbjct: 178 NSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETN 237
Query: 150 EIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
P+ ++ L + V ACG +F+V+L++ EG + G YGQLGHG S
Sbjct: 238 RSYPTQLKTLRTLGVRFVACGDEFSVFLTN-EGG-VFTCGAGAYGQLGHGF--------S 287
Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQK 267
S ++ PR + L G TI +VACG HT+A V S+G VY +G G G+LG R K
Sbjct: 288 SNEML------PRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTK 341
Query: 268 DEWVPRRV 275
+P+ V
Sbjct: 342 SLMLPQVV 349
Score = 226 (84.6 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 85/292 (29%), Positives = 127/292 (43%)
Query: 129 GNSL-AFGWNKHGQLGSGSIRNE--IEPSPVRCLV-SEVTATACGADFTVWLSSVEGASI 184
G L +G HGQLG G I +E + PS + + V ACG T++L++ +
Sbjct: 4 GKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTAT--GKV 61
Query: 185 LNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV 244
G Y QLGH + TK RP I L I+++ CG+ H++A+
Sbjct: 62 YACGSNDYSQLGH----DLPTK------------RPLLIPELQDYVIIQICCGSRHSLAL 105
Query: 245 DSKGYVYTWGFGGYGRLGHREQKD-EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
G V +WG G+LGH K+ +P+ V R V I+ G+ +S
Sbjct: 106 SDWGQVLSWGDNDCGQLGHATDKEIVQLPKVV----RQLVTKTVVQIACGNNHSLALTSC 161
Query: 304 GQLYMWG-----KLK-NNGDDWM---YPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-S 353
G+LY WG +L N+ +D YP L L G L + G H F+ + S +
Sbjct: 162 GELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFG 221
Query: 354 WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
WG G+LG +S P ++ L + V VACG S+ + + V
Sbjct: 222 WGRNNCGQLGLNDETNRS--YPTQLKTLRTLGVRFVACGDEFSVFLTNEGGV 271
Score = 222 (83.2 bits), Expect = 4.6e-15, P = 4.6e-15
Identities = 75/238 (31%), Positives = 118/238 (49%)
Query: 47 PTRLRPLVGVDIR---FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DKIQRDRPT 102
PT+ RPL+ +++ + C S H +A+ G+ +WG N+ GQLGH DK P
Sbjct: 77 PTK-RPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPK 135
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS--PVRC-- 158
+V +L + + G +H++ +T G ++G N +GQLG S N++ P+R
Sbjct: 136 VVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNS-PNDLTHCNYPLRLTT 194
Query: 159 -LVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L + A ACG + + +L S GA + G GQLG ++E N +Y
Sbjct: 195 LLGIPLAAIACGGNHS-FLISKSGA-VFGWGRNNCGQLG--LNDETNR-------SY--- 240
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
P + L + VACG +V + ++G V+T G G YG+LGH +E +PR V
Sbjct: 241 --PTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMV 296
>UNIPROTKB|E2RFW5 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:26091 KO:K10615 EMBL:AAEX03002773
GeneID:479225 KEGG:cfa:479225 RefSeq:XP_536367.2
Ensembl:ENSCAFT00000021404 Uniprot:E2RFW5
Length = 1049
Score = 280 (103.6 bits), Expect = 4.1e-22, P = 4.1e-22
Identities = 84/277 (30%), Positives = 123/277 (44%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DKIQRDRPTIVSELSKYKIKKA 115
DI+ V C H +A+ + WG+N+ GQLG G D ++ P ++ L +
Sbjct: 136 DIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQV 195
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTV 174
AG +H+ V+T G +G NK GQLG + P+ ++ L ++ CG D T
Sbjct: 196 AAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTA 255
Query: 175 WLSSVEGASILNAGLPQYGQLGHG-TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
L+ G AG YGQLGH T +E N PR + L G + +
Sbjct: 256 ALTKEGGVFTFGAG--GYGQLGHNSTSHEIN---------------PRKVFELMGSIVTQ 298
Query: 234 VACGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV--DVFQRNNVLPPEAVI 290
+ACG HT A V S G +Y++G GG G+LG + P V + F N PP+
Sbjct: 299 IACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFPYNGQCPPDIDS 358
Query: 291 SAGSVNSSCTAGGGQLYM-WGKLKNNG--DDWMYPKP 324
+GG Q + + +N G DD+ P P
Sbjct: 359 EEYFCVKRIFSGGDQSFSHYSNPQNCGPPDDFRCPDP 395
Score = 265 (98.3 bits), Expect = 4.2e-20, P = 4.2e-20
Identities = 82/276 (29%), Positives = 135/276 (48%)
Query: 48 TRLRP--LVGVDIR-FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTI 103
+R +P +V +D + VA C H +A++ +G+ Y WG + GQLG + R P
Sbjct: 71 SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRN 130
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCLVS- 161
+ LS +I + G H++ +++ +G NK+GQLG G + + P ++ L+
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGI 190
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
A G + L+ + GA I G ++GQLG +N D V P
Sbjct: 191 PFMQVAAGGAHSFVLT-LSGA-IFGWGRNKFGQLGLNDEN-----DRYV---------PN 234
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
+ +L + IV + CG +HT A+ +G V+T+G GGYG+LGH E PR+V F+
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELM 292
Query: 282 NVLPPEAVISAGSVNSSC-TAGGGQLYMWGKLKNNG 316
+ + I+ G ++S G++Y +G L NG
Sbjct: 293 GSIVTQ--IACGRQHTSAFVPSSGRIYSFG-LGGNG 325
Score = 220 (82.5 bits), Expect = 7.6e-15, P = 7.6e-15
Identities = 63/178 (35%), Positives = 84/178 (47%)
Query: 29 CW--DAVGRRKGALD-GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRN 85
CW + G+ +D SP ++ L+G+ VAAG H + + G + WGRN
Sbjct: 160 CWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAG--GAHSFVLTLSGAIFGWGRN 217
Query: 86 ERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG 145
+ GQLG D+ R P ++ L KI G HT +T++G FG +GQLG
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277
Query: 146 SIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG-TDN 201
S +EI P V L+ S VT ACG T G I + GL GQLG G T N
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGR-IYSFGLGGNGQLGTGSTSN 334
Score = 209 (78.6 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 92/328 (28%), Positives = 140/328 (42%)
Query: 82 WGRNERGQLGHGDKIQRD---RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
WG GQLG G I + P K++ G G HTV V +DG G N
Sbjct: 4 WGNASFGQLGLGG-IDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCND 62
Query: 139 HGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
GQLG R + P V L ++ + A +CG T+ L+ +G + GL GQLG
Sbjct: 63 LGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALND-KG-QVYAWGLDSDGQLGL 118
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
E +++ PR I +L+ IV+VACG H++A+ V+ WG
Sbjct: 119 LGSEE------CIRV-------PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165
Query: 258 YGRLGHR-EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVN--SSCTAGGGQLYMWGKLKN 314
YG+LG + K + P+ + + A + V S G G+ +G+L
Sbjct: 166 YGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGR-NKFGQLGL 224
Query: 315 NGDDWMY-PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSS 372
N ++ Y P L L + + G H + + ++G YG+LG+ + +
Sbjct: 225 NDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN 284
Query: 373 AMPKKVDILEGMHVISVACGYGHSLVIV 400
P+KV L G V +ACG H+ V
Sbjct: 285 --PRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 192 (72.6 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 70/284 (24%), Positives = 114/284 (40%)
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRC-LVSEVTATACGADFTVWLSSVEGASILNAGLP 190
L +G GQLG G I EI P + G + ++ ++ G
Sbjct: 2 LCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCN 61
Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
GQLGH + S K +P + AL + IV V+CG HT+A++ KG V
Sbjct: 62 DLGQLGH---------EKSRK-------KPEQVVALDAQNIVAVSCGEAHTLALNDKGQV 105
Query: 251 YTWGFGGYGRLGHREQKD-EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
Y WG G+LG ++ VPR + ++ ++ G +S + +++ W
Sbjct: 106 YAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQ----VACGYYHSLALSKASEVFCW 161
Query: 310 GKLKNN----GDDWMY---PKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGE 361
G+ K G D P+ + L G + +G H FV S I WG ++G+
Sbjct: 162 GQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 362 LGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG + +P + L ++ + CG H+ + V
Sbjct: 222 LGLND--ENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGV 263
Score = 136 (52.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 37/112 (33%), Positives = 49/112 (43%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P L+ L I ++ G H A+ EG +T+G GQLGH P V E
Sbjct: 233 PNLLKSLRTQKIVYICCG--EDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 290
Query: 107 LSKYKIKKAGAGRSHT-VVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
L + + GR HT V G +FG +GQLG+GS N P V+
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
>UNIPROTKB|E2RFV1 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:26091 KO:K10615 OMA:KLVIQPT
EMBL:AAEX03002773 RefSeq:XP_849808.1 Ensembl:ENSCAFT00000021413
GeneID:479225 KEGG:cfa:479225 NextBio:20854436 Uniprot:E2RFV1
Length = 1057
Score = 280 (103.6 bits), Expect = 4.2e-22, P = 4.2e-22
Identities = 84/277 (30%), Positives = 123/277 (44%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DKIQRDRPTIVSELSKYKIKKA 115
DI+ V C H +A+ + WG+N+ GQLG G D ++ P ++ L +
Sbjct: 136 DIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQV 195
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTV 174
AG +H+ V+T G +G NK GQLG + P+ ++ L ++ CG D T
Sbjct: 196 AAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTA 255
Query: 175 WLSSVEGASILNAGLPQYGQLGHG-TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
L+ G AG YGQLGH T +E N PR + L G + +
Sbjct: 256 ALTKEGGVFTFGAG--GYGQLGHNSTSHEIN---------------PRKVFELMGSIVTQ 298
Query: 234 VACGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV--DVFQRNNVLPPEAVI 290
+ACG HT A V S G +Y++G GG G+LG + P V + F N PP+
Sbjct: 299 IACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFPYNGQCPPDIDS 358
Query: 291 SAGSVNSSCTAGGGQLYM-WGKLKNNG--DDWMYPKP 324
+GG Q + + +N G DD+ P P
Sbjct: 359 EEYFCVKRIFSGGDQSFSHYSNPQNCGPPDDFRCPDP 395
Score = 265 (98.3 bits), Expect = 4.2e-20, P = 4.2e-20
Identities = 82/276 (29%), Positives = 135/276 (48%)
Query: 48 TRLRP--LVGVDIR-FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTI 103
+R +P +V +D + VA C H +A++ +G+ Y WG + GQLG + R P
Sbjct: 71 SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRN 130
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCLVS- 161
+ LS +I + G H++ +++ +G NK+GQLG G + + P ++ L+
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGI 190
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
A G + L+ + GA I G ++GQLG +N D V P
Sbjct: 191 PFMQVAAGGAHSFVLT-LSGA-IFGWGRNKFGQLGLNDEN-----DRYV---------PN 234
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
+ +L + IV + CG +HT A+ +G V+T+G GGYG+LGH E PR+V F+
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELM 292
Query: 282 NVLPPEAVISAGSVNSSC-TAGGGQLYMWGKLKNNG 316
+ + I+ G ++S G++Y +G L NG
Sbjct: 293 GSIVTQ--IACGRQHTSAFVPSSGRIYSFG-LGGNG 325
Score = 220 (82.5 bits), Expect = 7.7e-15, P = 7.7e-15
Identities = 63/178 (35%), Positives = 84/178 (47%)
Query: 29 CW--DAVGRRKGALD-GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRN 85
CW + G+ +D SP ++ L+G+ VAAG H + + G + WGRN
Sbjct: 160 CWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAG--GAHSFVLTLSGAIFGWGRN 217
Query: 86 ERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG 145
+ GQLG D+ R P ++ L KI G HT +T++G FG +GQLG
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277
Query: 146 SIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG-TDN 201
S +EI P V L+ S VT ACG T G I + GL GQLG G T N
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGR-IYSFGLGGNGQLGTGSTSN 334
Score = 209 (78.6 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 92/328 (28%), Positives = 140/328 (42%)
Query: 82 WGRNERGQLGHGDKIQRD---RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
WG GQLG G I + P K++ G G HTV V +DG G N
Sbjct: 4 WGNASFGQLGLGG-IDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCND 62
Query: 139 HGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
GQLG R + P V L ++ + A +CG T+ L+ +G + GL GQLG
Sbjct: 63 LGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALND-KG-QVYAWGLDSDGQLGL 118
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
E +++ PR I +L+ IV+VACG H++A+ V+ WG
Sbjct: 119 LGSEE------CIRV-------PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165
Query: 258 YGRLGHR-EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVN--SSCTAGGGQLYMWGKLKN 314
YG+LG + K + P+ + + A + V S G G+ +G+L
Sbjct: 166 YGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGR-NKFGQLGL 224
Query: 315 NGDDWMY-PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSS 372
N ++ Y P L L + + G H + + ++G YG+LG+ + +
Sbjct: 225 NDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN 284
Query: 373 AMPKKVDILEGMHVISVACGYGHSLVIV 400
P+KV L G V +ACG H+ V
Sbjct: 285 --PRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 192 (72.6 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 70/284 (24%), Positives = 114/284 (40%)
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRC-LVSEVTATACGADFTVWLSSVEGASILNAGLP 190
L +G GQLG G I EI P + G + ++ ++ G
Sbjct: 2 LCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCN 61
Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
GQLGH + S K +P + AL + IV V+CG HT+A++ KG V
Sbjct: 62 DLGQLGH---------EKSRK-------KPEQVVALDAQNIVAVSCGEAHTLALNDKGQV 105
Query: 251 YTWGFGGYGRLGHREQKD-EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
Y WG G+LG ++ VPR + ++ ++ G +S + +++ W
Sbjct: 106 YAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQ----VACGYYHSLALSKASEVFCW 161
Query: 310 GKLKNN----GDDWMY---PKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGE 361
G+ K G D P+ + L G + +G H FV S I WG ++G+
Sbjct: 162 GQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 362 LGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG + +P + L ++ + CG H+ + V
Sbjct: 222 LGLND--ENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGV 263
Score = 136 (52.9 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 37/112 (33%), Positives = 49/112 (43%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P L+ L I ++ G H A+ EG +T+G GQLGH P V E
Sbjct: 233 PNLLKSLRTQKIVYICCG--EDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 290
Query: 107 LSKYKIKKAGAGRSHT-VVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
L + + GR HT V G +FG +GQLG+GS N P V+
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
>UNIPROTKB|F1N1N9 [details] [associations]
symbol:HERC5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050688 "regulation of defense response to virus"
evidence=IEA] [GO:0042296 "ISG15 ligase activity" evidence=IEA]
[GO:0032020 "ISG15-protein conjugation" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0050688 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:KDWITNT GO:GO:0042296
GO:GO:0032020 EMBL:DAAA02017014 IPI:IPI00907336
Ensembl:ENSBTAT00000052811 Uniprot:F1N1N9
Length = 959
Score = 278 (102.9 bits), Expect = 7.2e-22, P = 7.2e-22
Identities = 79/256 (30%), Positives = 122/256 (47%)
Query: 65 CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI-QRDRPTIVSELSKYKIKKAGAGRSHTV 123
C H +A+ G + WG+N GQLG G P IV LS + + AG +H++
Sbjct: 155 CGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISAGEAHSM 214
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGA 182
++ GN ++G N GQLG G N+ PS + L + V ACG T L+ +
Sbjct: 215 ALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGCHTALLT--KSG 272
Query: 183 SILNAGLPQYGQLGHG-TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHT 241
+ G +YGQLGH T NE RPR + L G + ++ACG HT
Sbjct: 273 LVFTFGDGKYGQLGHNSTQNEL---------------RPRLVTGLVGNRVTQIACGRQHT 317
Query: 242 VA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
+A V G V+++G G G+LG+ +++ +PR + + L E+ S +
Sbjct: 318 LAYVSDTGKVFSFGSGKEGQLGNGGTRNQLIPRPMKLLSSEE-LKSESSTSVKEL--IMV 374
Query: 301 AGGGQ-LYMWGKLKNN 315
AGG Q + +W + +N+
Sbjct: 375 AGGNQSILIWMEKENS 390
Score = 246 (91.7 bits), Expect = 7.0e-18, P = 7.0e-18
Identities = 64/197 (32%), Positives = 101/197 (51%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G + + +P + L GV + ++AG H +A+ + G Y+WGRN+ GQLG G
Sbjct: 183 GRIFASTSTPEIVENLSGVPLVQISAG--EAHSMALSMSGNVYSWGRNDCGQLGLGHTYN 240
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
++ P+ + L K++ G HT ++T+ G FG K+GQLG S +NE+ P V
Sbjct: 241 KESPSCIEALDDQKVEFLACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVT 300
Query: 158 CLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG-TDNEYNTKD----SSVK 211
LV + VT ACG T+ S G + + G + GQLG+G T N+ + SS +
Sbjct: 301 GLVGNRVTQIACGRQHTLAYVSDTG-KVFSFGSGKEGQLGNGGTRNQLIPRPMKLLSSEE 359
Query: 212 LAYEAQPRPRAIAALAG 228
L E+ + + +AG
Sbjct: 360 LKSESSTSVKELIMVAG 376
Score = 177 (67.4 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 72/260 (27%), Positives = 120/260 (46%)
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI-RNEIEPSPVRCLVS-EVT 164
L + I + G H++ +++ G A+G N GQLG G I + P V L +
Sbjct: 145 LQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLV 204
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
+ G ++ LS + G ++ + G GQLG G + YN K+S P I
Sbjct: 205 QISAGEAHSMALS-MSG-NVYSWGRNDCGQLGLG--HTYN-KES-----------PSCIE 248
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
AL + + +ACG HT + G V+T+G G YG+LGH ++E PR V N V
Sbjct: 249 ALDDQKVEFLACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVT 308
Query: 285 PPEAVISAGSVNS-SCTAGGGQLYMWG-----KLKNNGD-DWMYPKPLMDLSGWNLRCMD 337
I+ G ++ + + G+++ +G +L N G + + P+P+ LS L+
Sbjct: 309 Q----IACGRQHTLAYVSDTGKVFSFGSGKEGQLGNGGTRNQLIPRPMKLLSSEELKSES 364
Query: 338 SGNMHHFV---GADSSCISW 354
S ++ + G + S + W
Sbjct: 365 STSVKELIMVAGGNQSILIW 384
Score = 148 (57.2 bits), Expect = 6.7e-07, P = 6.7e-07
Identities = 50/186 (26%), Positives = 81/186 (43%)
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG-HREQKDEWVPRRVDVFQRNNVL 284
L + I+++ CG H++A+ G ++ WG G+LG R P V+ + V
Sbjct: 145 LQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVE--NLSGV- 201
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWGK--LKNNGDDWMY----PKPLMDLSGWNLRCMDS 338
P ISAG +S + G +Y WG+ G Y P + L + +
Sbjct: 202 -PLVQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLAC 260
Query: 339 GNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G H + S + ++G +YG+LG+ ++ P+ V L G V +ACG H+L
Sbjct: 261 GGCHTALLTKSGLVFTFGDGKYGQLGHN--STQNELRPRLVTGLVGNRVTQIACGRQHTL 318
Query: 398 VIVDRT 403
V T
Sbjct: 319 AYVSDT 324
Score = 133 (51.9 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 57/262 (21%), Positives = 111/262 (42%)
Query: 151 IEPSPVRCLVSE--VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
IE + +C++ E + CG ++ LS +G + G GQLG G
Sbjct: 136 IEHARFQCILQEKNIIQITCGDYHSLALS--KGGELFAWGQNLDGQLGVGR--------- 184
Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG--HREQ 266
+ + P + L+G +V+++ G H++A+ G VY+WG G+LG H
Sbjct: 185 ----IFASTSTPEIVENLSGVPLVQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYN 240
Query: 267 KDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWM 320
K+ P ++ V ++ G +++ G ++ +G K N+ + +
Sbjct: 241 KES--PSCIEALDDQKV----EFLACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNEL 294
Query: 321 YPKPLMDLSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV 378
P+ + L G + + G H +V S+G + G+LG G G ++ +P+ +
Sbjct: 295 RPRLVTGLVGNRVTQIACGRQHTLAYVSDTGKVFSFGSGKEGQLGNG--GTRNQLIPRPM 352
Query: 379 DILEGMHVISVACGYGHSLVIV 400
+L + S + L++V
Sbjct: 353 KLLSSEELKSESSTSVKELIMV 374
>TAIR|locus:2076889 [details] [associations]
symbol:AT3G02510 "AT3G02510" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
[GO:0008536 "Ran GTPase binding" evidence=ISS] INTERPRO:IPR000408
Pfam:PF00415 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 UniGene:At.20016
UniGene:At.41128 EMBL:AK227929 IPI:IPI00539921 RefSeq:NP_186900.3
UniGene:At.70614 ProteinModelPortal:Q0WSJ9 SMR:Q0WSJ9 PRIDE:Q0WSJ9
EnsemblPlants:AT3G02510.1 GeneID:821100 KEGG:ath:AT3G02510
TAIR:At3g02510 OMA:NGGVQCW PhylomeDB:Q0WSJ9 Genevestigator:Q2V3Z2
Uniprot:Q0WSJ9
Length = 393
Score = 267 (99.0 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 89/324 (27%), Positives = 145/324 (44%)
Query: 82 WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
WG E GQLG G +++ +V L Y ++ +G +++ + +DG +GWN+ G
Sbjct: 10 WGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWNQRGT 69
Query: 142 LG-SGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
LG + E PS V+ L + ++T A G + + +G + G +YGQ G
Sbjct: 70 LGHQPETKTENIPSRVKALANVKITQAAIGGWHCLAVDD-QGRAYAWGG-NEYGQCG--- 124
Query: 200 DNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYG 259
E KD + P+ A T+ +VA G H+V + +G+V+TWG
Sbjct: 125 --EEPLKDEMGRPVRRDIVIPKRCAPKL--TVRQVAAGGTHSVVLTREGHVWTWGQPWPP 180
Query: 260 RLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS-AGSVNSSCTAGGGQLYMWGKLKNNGDD 318
G +Q VP RV + ++ A + A + A G Y G+L GD
Sbjct: 181 --GDIKQIS--VPVRVQGLENVRLIAVGAFHNLALEEDGRLLAWGNNEY--GQL-GTGDT 233
Query: 319 W--MYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMP 375
+P P+ L L + +G H D + WG ++G LG G + S +P
Sbjct: 234 QPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGLGDNDKSSKMVP 293
Query: 376 KKVDILEGMHVISVACGYGHSLVI 399
+KV++L +I V+CG HS+ +
Sbjct: 294 QKVNLLAEEDIIQVSCGGTHSVAL 317
Score = 259 (96.2 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 83/274 (30%), Positives = 133/274 (48%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGD-KIQRDRPT--- 102
P+R++ L V I A G HC+AVD +GR Y WG NE GQ G K + RP
Sbjct: 82 PSRVKALANVKITQAAIG--GWHCLAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRD 139
Query: 103 -IVSE--LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
++ + K +++ AG +H+VV+T +G+ + W + G I+ P V+ L
Sbjct: 140 IVIPKRCAPKLTVRQVAAGGTHSVVLTREGH--VWTWGQPWP--PGDIKQISVPVRVQGL 195
Query: 160 VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
V A GA + L E +L G +YGQLG G +T+ +S P
Sbjct: 196 -ENVRLIAVGAFHNLALE--EDGRLLAWGNNEYGQLGTG-----DTQPTS-------HPV 240
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG--HREQKDEWVPRRVDV 277
P + L T+V +A G H+ A+ KG VY WG G +GRLG ++ + VP++V++
Sbjct: 241 P--VQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGLGDNDKSSKMVPQKVNL 298
Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
+++ +S G +S G+++ +G+
Sbjct: 299 LAEEDIIQ----VSCGGTHSVALTRDGRIFSFGR 328
Score = 229 (85.7 bits), Expect = 8.1e-17, P = 8.1e-17
Identities = 77/279 (27%), Positives = 122/279 (43%)
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLP 190
+A+G + GQLG G+ + V L V + G+ + L+ + ++ G
Sbjct: 8 IAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNS--LAICDDGTMFTWGWN 65
Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
Q G LGH + TK ++ P + ALA I + A G H +AVD +G
Sbjct: 66 QRGTLGHQPE----TKTENI---------PSRVKALANVKITQAAIGGWHCLAVDDQGRA 112
Query: 251 YTWGFGGYGRLGHREQKDEWV-PRRVDVFQRNNVLPPEAV--ISAGSVNSSCTAGGGQLY 307
Y WG YG+ G KDE P R D+ P V ++AG +S G ++
Sbjct: 113 YAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTREGHVW 172
Query: 308 MWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGP 366
WG+ GD P+ N+R + G H+ + D ++WG+ +YG+LG G
Sbjct: 173 TWGQPWPPGDIKQISVPVRVQGLENVRLIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGD 232
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
S +P V L+ + ++ +A G HS + D+ V
Sbjct: 233 TQPTSHPVP--VQGLDDLTLVDIAAGGWHSTALTDKGEV 269
Score = 204 (76.9 bits), Expect = 7.2e-14, P = 7.2e-14
Identities = 101/372 (27%), Positives = 163/372 (43%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTIVSELSKYKIKKAG 116
+R V +G S + +A+ +G +TWG N+RG LGH + + + P+ V L+ KI +A
Sbjct: 40 VRSVVSG--SRNSLAICDDGTMFTWGWNQRGTLGHQPETKTENIPSRVKALANVKITQAA 97
Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWL 176
G H + V + G + A+G N++GQ G +++E+ PVR + V C TV
Sbjct: 98 IGGWHCLAVDDQGRAYAWGGNEYGQCGEEPLKDEMG-RPVRRDI--VIPKRCAPKLTVRQ 154
Query: 177 SSVEGA-SIL--NAG-LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIV 232
+ G S++ G + +GQ D K SV P + L E +
Sbjct: 155 VAAGGTHSVVLTREGHVWTWGQPWPPGD----IKQISV---------PVRVQGL--ENVR 199
Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISA 292
+A G H +A++ G + WG YG+LG + + P V V Q + L + +
Sbjct: 200 LIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTSHP--VPV-QGLDDLTLVDIAAG 256
Query: 293 GSVNSSCTAGG-------GQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF- 344
G +++ T G G+ G N+ M P+ + L+ ++ + G H
Sbjct: 257 GWHSTALTDKGEVYGWGRGEHGRLGLGDNDKSSKMVPQKVNLLAEEDIIQVSCGGTHSVA 316
Query: 345 VGADSSCISWGHAQYGELGYG---PYGQKSSAMPKKVDILEGM--HVI----------SV 389
+ D S+G +G LGYG GQ +P K+ EG H S+
Sbjct: 317 LTRDGRIFSFGRGDHGRLGYGRKVTTGQPLE-LPIKIPPPEGSFNHTDEEEEGKWSAKSI 375
Query: 390 ACGYGHSLVIVD 401
ACG H+L IV+
Sbjct: 376 ACGGRHTLAIVE 387
Score = 195 (73.7 bits), Expect = 7.9e-13, P = 7.9e-13
Identities = 61/206 (29%), Positives = 95/206 (46%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P R++ L V R +A G H +A++ +GR WG NE GQLG GD P V
Sbjct: 189 PVRVQGLENV--RLIAVGAF--HNLALEEDGRLLAWGNNEYGQLGTGDTQPTSHPVPVQG 244
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI--RNEIEPSPVRCLVSE-V 163
L + AG H+ +T+ G +G +HG+LG G +++ P V L E +
Sbjct: 245 LDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGLGDNDKSSKMVPQKVNLLAEEDI 304
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
+CG +V L+ +G I + G +G+LG+G T ++L + P +
Sbjct: 305 IQVSCGGTHSVALTR-DGR-IFSFGRGDHGRLGYGRKV---TTGQPLELPIKIPPPEGSF 359
Query: 224 AAL----AGETIVK-VACGTNHTVAV 244
G+ K +ACG HT+A+
Sbjct: 360 NHTDEEEEGKWSAKSIACGGRHTLAI 385
>TAIR|locus:2076532 [details] [associations]
symbol:AT3G02300 "AT3G02300" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0008536
"Ran GTPase binding" evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415
EMBL:CP002686 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 IPI:IPI00534317
RefSeq:NP_186879.2 UniGene:At.41157 ProteinModelPortal:F4J609
SMR:F4J609 EnsemblPlants:AT3G02300.1 GeneID:821167
KEGG:ath:AT3G02300 OMA:LKELCEF Uniprot:F4J609
Length = 471
Score = 271 (100.5 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 114/382 (29%), Positives = 165/382 (43%)
Query: 55 GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK 114
G + R++ C H AV +G + WG NE GQLG G ++ R P V +L +K
Sbjct: 58 GANSRWLDISCGREHTAAVASDGSLFAWGANEYGQLGDGTEVGRKHPKKVKQLQSEFVKF 117
Query: 115 AGAGRSHTVVVTE----DGN-SLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACG 169
G T + E DG S + W GS R P + +V+ CG
Sbjct: 118 VSCGAFCTAAIAEPRENDGTLSTSRLWVWGQNQGSNLPRLFSGAFPATTAIRQVS---CG 174
Query: 170 ADFTVWLSSVEGASILNA-GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAG 228
V LS EG +L A G + GQLG G E + V AY A+ A +
Sbjct: 175 TAHVVALSE-EG--LLQAWGYNEQGQLGRGVTCE-GLQAPRVINAY-AKFLDEAPELVK- 228
Query: 229 ETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH---REQKDEWVPRRVDVFQRNNVLP 285
I++++CG HT A+ G VYTWG G G+LGH + E +PRRV + V
Sbjct: 229 --IMQLSCGEYHTAALSDAGEVYTWGLGSMGQLGHVSLQSGDKELIPRRV--VGLDGVSM 284
Query: 286 PEAVISAGSVNSSCTAGGGQLYMWG-----KLK-----------NNGDDWMYPK-PLMDL 328
E ++ G V++ + G LY WG +L +NG + + P++ +
Sbjct: 285 KE--VACGGVHTCALSLEGALYAWGGGQAGQLGLGPQSGFFFSVSNGSEMLLRNVPVLVI 342
Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAM--PKKVDILEGMH 385
++R + G+ H V I WG+ YG+ +KSS P VD G
Sbjct: 343 PT-DVRLVACGHSHTLVYMREGRICGWGYNSYGQAA----NEKSSYAWYPSPVDWCVGQ- 396
Query: 386 VISVACGYGHSLVIVDRTNVGE 407
V +A G GHS V+ D ++ E
Sbjct: 397 VRKLAAGGGHSAVLTDAFSLKE 418
Score = 256 (95.2 bits), Expect = 9.1e-20, P = 9.1e-20
Identities = 87/320 (27%), Positives = 146/320 (45%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGD--KIQRDRPTIVSEL------SKYKIKKAGAGRSHT 122
V++ + Y WG N+ GQ G + K+ R + EL + + GR HT
Sbjct: 14 VSIPTKSAIYVWGYNQSGQTGRNEQEKLLRIPKQLPPELFGCPAGANSRWLDISCGREHT 73
Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEG 181
V DG+ A+G N++GQLG G+ P V+ L SE V +CGA T ++
Sbjct: 74 AAVASDGSLFAWGANEYGQLGDGTEVGRKHPKKVKQLQSEFVKFVSCGAFCTAAIAEPRE 133
Query: 182 ASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHT 241
N G +L N+ S++ PR + A A I +V+CGT H
Sbjct: 134 ----NDGTLSTSRLWVWGQNQ----GSNL-------PRLFSGAFPATTAIRQVSCGTAHV 178
Query: 242 VAVDSKGYVYTWGFGGYGRLGHREQKDEW-VPRRVDVFQRNNVLPPEAV----ISAGSVN 296
VA+ +G + WG+ G+LG + PR ++ + + PE V +S G +
Sbjct: 179 VALSEEGLLQAWGYNEQGQLGRGVTCEGLQAPRVINAYAKFLDEAPELVKIMQLSCGEYH 238
Query: 297 SSCTAGGGQLYMWG-----KLKN----NGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VG 346
++ + G++Y WG +L + +GD + P+ ++ L G +++ + G +H +
Sbjct: 239 TAALSDAGEVYTWGLGSMGQLGHVSLQSGDKELIPRRVVGLDGVSMKEVACGGVHTCALS 298
Query: 347 ADSSCISWGHAQYGELGYGP 366
+ + +WG Q G+LG GP
Sbjct: 299 LEGALYAWGGGQAGQLGLGP 318
Score = 132 (51.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 51/227 (22%), Positives = 98/227 (43%)
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
Y Q G NE ++ +++ + P A A + ++CG HT AV S G ++
Sbjct: 27 YNQSGQTGRNE---QEKLLRIPKQLPPELFGCPAGANSRWLDISCGREHTAAVASDGSLF 83
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV--LPPEAVISAGSVN---SSCTAGGGQL 306
WG YG+LG + P++V Q V + A +A + T +L
Sbjct: 84 AWGANEYGQLGDGTEVGRKHPKKVKQLQSEFVKFVSCGAFCTAAIAEPRENDGTLSTSRL 143
Query: 307 YMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYG 365
++WG+ + + ++ + +R + G H ++ + +WG+ + G+LG G
Sbjct: 144 WVWGQNQGSNLPRLFSGAFPATTA--IRQVSCGTAHVVALSEEGLLQAWGYNEQGQLGRG 201
Query: 366 PY--GQKS----SAMPKKVDIL-EGMHVISVACGYGHSLVIVDRTNV 405
G ++ +A K +D E + ++ ++CG H+ + D V
Sbjct: 202 VTCEGLQAPRVINAYAKFLDEAPELVKIMQLSCGEYHTAALSDAGEV 248
>RGD|1563497 [details] [associations]
symbol:Sergef "secretion regulating guanine nucleotide exchange
factor" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA;ISO] [GO:0050709 "negative regulation of
protein secretion" evidence=IEA;ISO] InterPro:IPR027048 RGD:1563497
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005730 GO:GO:0045111
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
GeneTree:ENSGT00700000104160 OrthoDB:EOG4J1183
PANTHER:PTHR22870:SF7 IPI:IPI00360920 Ensembl:ENSRNOT00000015352
UCSC:RGD:1563497 Uniprot:D3ZN16
Length = 339
Score = 254 (94.5 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 94/313 (30%), Positives = 135/313 (43%)
Query: 67 SCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK-IKKAGAGRSHTVVV 125
SC AV + WG N GQLG G K P +S+ K IK G H+VVV
Sbjct: 5 SCASEAVSAAAVLFAWGANSYGQLGLGHKEDVLLPQQLSDFCKSGCIKSVTGGGGHSVVV 64
Query: 126 TEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASI 184
T+ G G NK GQLG G + + + L+ + ACG DFT+ L+ E +
Sbjct: 65 TDGGGLFVCGLNKDGQLGLGHTEEVLRFTICKPLLGCPIRQVACGWDFTIMLT--EKGQV 122
Query: 185 LNAGLPQYGQLG--HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTV 242
L+ G +GQLG HG + V P+AI L E +V VA G H +
Sbjct: 123 LSCGSNAFGQLGVPHGP------RKCVV---------PQAIECLR-EKVVCVAAGLRHAL 166
Query: 243 AVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV--LPPEAVISA--GSVNSS 298
A G + WG G G R + +P + + + V L V+ A GS +S+
Sbjct: 167 ATTDTGSTFQWGTG-LASSGRRLCPGQNLPLFLTAKEPSRVTGLESSTVVCAVAGSDHSA 225
Query: 299 CTAGGGQLYMWGKLKNN---GDDWMYPKPLMDLSGW----NLRCMDSGNMHHFVGADSSC 351
G+LY+WG+ K+ P P + + + + SG H ++
Sbjct: 226 SLTDTGELYVWGRNKHGQLASLATFLPLPQRVEAHYFQDEKVTAVWSGWTHLVAKTETGK 285
Query: 352 I-SWGHAQYGELG 363
+ +WG A YG+LG
Sbjct: 286 VFTWGRADYGQLG 298
Score = 185 (70.2 bits), Expect = 6.9e-12, P = 6.9e-12
Identities = 70/261 (26%), Positives = 110/261 (42%)
Query: 60 FVAAGCVSC------HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIK 113
F +GC+ H V V G + G N+ GQLG G + R TI L I+
Sbjct: 45 FCKSGCIKSVTGGGGHSVVVTDGGGLFVCGLNKDGQLGLGHTEEVLRFTICKPLLGCPIR 104
Query: 114 KAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSPVRCLVSEVTATACGADF 172
+ G T+++TE G L+ G N GQLG R + P + CL +V A G
Sbjct: 105 QVACGWDFTIMLTEKGQVLSCGSNAFGQLGVPHGPRKCVVPQAIECLREKVVCVAAGLRH 164
Query: 173 TVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIV 232
L++ + S Q+G G + ++ L A+ P + L T+V
Sbjct: 165 A--LATTDTGSTF-----QWGT-GLASSGRRLCPGQNLPLFLTAK-EPSRVTGLESSTVV 215
Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV--FQRNNVLPPEAVI 290
G++H+ ++ G +Y WG +G+L +P+RV+ FQ V AV
Sbjct: 216 CAVAGSDHSASLTDTGELYVWGRNKHGQLASLATFLP-LPQRVEAHYFQDEKVT---AVW 271
Query: 291 SAGSVNSSCTAGGGQLYMWGK 311
S G + G+++ WG+
Sbjct: 272 S-GWTHLVAKTETGKVFTWGR 291
Score = 141 (54.7 bits), Expect = 7.5e-07, P = 7.5e-07
Identities = 60/219 (27%), Positives = 95/219 (43%)
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVS 105
T +PL+G IR VA G + + +G+ + G N GQLG HG + + P +
Sbjct: 93 TICKPLLGCPIRQVACGWD--FTIMLTEKGQVLSCGSNAFGQLGVPHGPR-KCVVPQAI- 148
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA 165
E + K+ AG H + T+ G++ F W G SG + P+ L ++ +
Sbjct: 149 ECLREKVVCVAAGLRHALATTDTGST--FQWGT-GLASSGRRLCPGQNLPL-FLTAKEPS 204
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
G + + + +V G+ +A L G+L N++ S P P+ + A
Sbjct: 205 RVTGLESSTVVCAVAGSDH-SASLTDTGELYVWGRNKHGQLASLATFL----PLPQRVEA 259
Query: 226 --LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
E + V G H VA G V+TWG YG+LG
Sbjct: 260 HYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLG 298
Score = 120 (47.3 bits), Expect = 0.00017, P = 0.00017
Identities = 40/166 (24%), Positives = 78/166 (46%)
Query: 243 AVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAG 302
AV + ++ WG YG+LG ++D +P+++ F ++ + ++V G + T G
Sbjct: 10 AVSAAAVLFAWGANSYGQLGLGHKEDVLLPQQLSDFCKSGCI--KSVTGGGGHSVVVTDG 67
Query: 303 GGQLYMWGKLKNNGDDWMYPKPLM------DLSGWNLRCMDSG-NMHHFVGADSSCISWG 355
GG L++ G K+ + + ++ L G +R + G + + +S G
Sbjct: 68 GG-LFVCGLNKDGQLGLGHTEEVLRFTICKPLLGCPIRQVACGWDFTIMLTEKGQVLSCG 126
Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
+G+LG P+G + +P+ ++ L V+ VA G H+L D
Sbjct: 127 SNAFGQLGV-PHGPRKCVVPQAIECLREK-VVCVAAGLRHALATTD 170
>ZFIN|ZDB-GENE-090313-139 [details] [associations]
symbol:herc3 "hect domain and RLD 3" species:7955
"Danio rerio" [GO:0006464 "cellular protein modification process"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-090313-139
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00660000095216 CTD:8916 HOGENOM:HOG000208452
HOVERGEN:HBG050878 OMA:SPAVDFR OrthoDB:EOG4RBQHS EMBL:CU467858
IPI:IPI00901161 RefSeq:NP_001139096.1 UniGene:Dr.86009
Ensembl:ENSDART00000112994 Ensembl:ENSDART00000141977
GeneID:100003587 NextBio:20785898 Uniprot:B8JLD4
Length = 1046
Score = 273 (101.2 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 99/360 (27%), Positives = 158/360 (43%)
Query: 29 CWDAVGRRK---GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRN 85
CW + G + GA + ++ P G ++ VA G + H + + +G YT G N
Sbjct: 4 CWGSSGAGQLGIGASEASVFEPRSCCVFDGRGLKEVACG--NQHSLFLLHDGSVYTCGSN 61
Query: 86 ERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG 145
GQLGH DK RP +V L KI G++H++ V E G A+G GQLG G
Sbjct: 62 SCGQLGH-DK-GGSRPELVGALDAQKISGVSCGQAHSLAVNEQGQVFAWGAGDGGQLGLG 119
Query: 146 SIRNEIE-PSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEY 203
+ + P ++ L ++ CG + LS +G + G GQLG G E
Sbjct: 120 TAEEAVRVPRLIKKLCEHRISQVMCGNHHCIALSK-DG-QLFVWGENSSGQLGLGK-GEP 176
Query: 204 NTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
+T P+P + +L G + +++ G +H+ A+ G V+ WG G+LG
Sbjct: 177 ST----------LSPQP--LKSLCGIPLTQISAGGDHSFALSFSGAVFGWGKNSAGQLGL 224
Query: 264 REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN--GDDWMY 321
+++D VP + + V+ IS G +++ G L+ +G G D
Sbjct: 225 NDEQDRAVPCHIKFLRSQKVV----YISCGEEHTAALTKEGGLFTFGNGSKGQLGHDSTR 280
Query: 322 PKPL----MDLSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMP 375
+PL M+L G + + G H FV + ++G G+LG G G S +P
Sbjct: 281 NEPLPRRVMELMGTEVSQIACGRNHTLAFVPSTGLIYAFGCNTQGQLGTGIRGSAKSPVP 340
Score = 228 (85.3 bits), Expect = 9.3e-16, P = 9.3e-16
Identities = 85/334 (25%), Positives = 139/334 (41%)
Query: 82 WGRNERGQLGHG-DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
WG + GQLG G + P +K+ G H++ + DG+ G N G
Sbjct: 5 WGSSGAGQLGIGASEASVFEPRSCCVFDGRGLKEVACGNQHSLFLLHDGSVYTCGSNSCG 64
Query: 141 QLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
QLG + P V L +++ +CG ++ ++ E + G GQLG GT
Sbjct: 65 QLGHD--KGGSRPELVGALDAQKISGVSCGQAHSLAVN--EQGQVFAWGAGDGGQLGLGT 120
Query: 200 DNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYG 259
E +V++ PR I L I +V CG +H +A+ G ++ WG G
Sbjct: 121 AEE------AVRV-------PRLIKKLCEHRISQVMCGNHHCIALSKDGQLFVWGENSSG 167
Query: 260 RLGHREQKDEWVPRRVDVFQRNNVLP-PEAVISAGSVNSSCTAGGGQLYMWGKLK----- 313
+LG K E P + ++ P ISAG +S + G ++ WGK
Sbjct: 168 QLGLG--KGE--PSTLSPQPLKSLCGIPLTQISAGGDHSFALSFSGAVFGWGKNSAGQLG 223
Query: 314 -NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKS 371
N+ D P + L + + G H + + ++G+ G+LG+ ++
Sbjct: 224 LNDEQDRAVPCHIKFLRSQKVVYISCGEEHTAALTKEGGLFTFGNGSKGQLGHD--STRN 281
Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
+P++V L G V +ACG H+L V T +
Sbjct: 282 EPLPRRVMELMGTEVSQIACGRNHTLAFVPSTGL 315
Score = 217 (81.4 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 72/223 (32%), Positives = 102/223 (45%)
Query: 22 LLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
L G +G KG + + +SP L+ L G+ + ++AG H A+ G +
Sbjct: 158 LFVWGENSSGQLGLGKG--EPSTLSPQPLKSLCGIPLTQISAG--GDHSFALSFSGAVFG 213
Query: 82 WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
WG+N GQLG D+ R P + L K+ G HT +T++G FG GQ
Sbjct: 214 WGKNSAGQLGLNDEQDRAVPCHIKFLRSQKVVYISCGEEHTAALTKEGGLFTFGNGSKGQ 273
Query: 142 LGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNA-GLPQYGQLGHGT 199
LG S RNE P V L+ +EV+ ACG + T L+ V ++ A G GQLG G
Sbjct: 274 LGHDSTRNEPLPRRVMELMGTEVSQIACGRNHT--LAFVPSTGLIYAFGCNTQGQLGTGI 331
Query: 200 DNEYNTKDSSVKLAYEAQPRPRAIAALAGE--TIVKVACGTNH 240
+ K S V ++ QP A E TI K+ G +H
Sbjct: 332 RG--SAK-SPVPVS-NIQPLCIGNAYTRTEHCTIAKIHSGGDH 370
Score = 192 (72.6 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 52/175 (29%), Positives = 82/175 (46%)
Query: 25 CGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGR 84
CGS +G KG LV + + GV C H +AV+ +G+ + WG
Sbjct: 58 CGSNSCGQLGHDKGGSRPELVGALDAQKISGVS-------CGQAHSLAVNEQGQVFAWGA 110
Query: 85 NERGQLGHGDKIQRDR-PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG 143
+ GQLG G + R P ++ +L +++I + G H + +++DG +G N GQLG
Sbjct: 111 GDGGQLGLGTAEEAVRVPRLIKKLCEHRISQVMCGNHHCIALSKDGQLFVWGENSSGQLG 170
Query: 144 SGSIR-NEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
G + + P P++ L +T + G D + LS GA + G GQLG
Sbjct: 171 LGKGEPSTLSPQPLKSLCGIPLTQISAGGDHSFALS-FSGA-VFGWGKNSAGQLG 223
>MGI|MGI:1914595 [details] [associations]
symbol:Herc4 "hect domain and RLD 4" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA;TAS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0006464 "cellular protein modification process"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IMP]
[GO:0016567 "protein ubiquitination" evidence=TAS] [GO:0016874
"ligase activity" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 MGI:MGI:1914595 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 GO:GO:0005634 GO:GO:0005737 GO:GO:0030154
GO:GO:0007283 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00660000095216 HOVERGEN:HBG050878 HSSP:Q9UEP9
CTD:26091 KO:K10615 EMBL:AK009436 EMBL:AK143111 EMBL:AK145735
EMBL:AK147723 EMBL:BC026855 EMBL:BC043082 EMBL:BC047157
EMBL:BC060033 IPI:IPI00453903 IPI:IPI00554980 IPI:IPI00828240
RefSeq:NP_080377.2 RefSeq:NP_084390.1 UniGene:Mm.234437
UniGene:Mm.422789 UniGene:Mm.441725 UniGene:Mm.487274
ProteinModelPortal:Q6PAV2 SMR:Q6PAV2 STRING:Q6PAV2
PhosphoSite:Q6PAV2 PaxDb:Q6PAV2 PRIDE:Q6PAV2
Ensembl:ENSMUST00000020258 GeneID:67345 KEGG:mmu:67345
UCSC:uc007fka.2 UCSC:uc007fkc.2 UCSC:uc007fkd.2 InParanoid:Q6PAV2
OMA:KLVIQPT OrthoDB:EOG44XJG1 NextBio:324318 Bgee:Q6PAV2
CleanEx:MM_HERC4 Genevestigator:Q6PAV2 Uniprot:Q6PAV2
Length = 1057
Score = 273 (101.2 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 87/281 (30%), Positives = 125/281 (44%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTIVSELSKYKIKKA 115
DI+ V C H +A+ + WG+N+ GQLG G Q+ P ++ L +
Sbjct: 136 DIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQV 195
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTV 174
AG +H+ V+T G +G NK GQLG + P+ ++ L S+ + CG D T
Sbjct: 196 AAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTA 255
Query: 175 WLSSVEGASILNAGLPQYGQLGHG-TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
L+ G AG YGQLGH T +E N PR + L G + +
Sbjct: 256 ALTKEGGVFTFGAG--GYGQLGHNSTSHEIN---------------PRKVFELMGSIVTQ 298
Query: 234 VACGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV--DVFQRNNVLPPEAVI 290
VACG HT A V S G +Y++G GG G+LG + P V + F N P +
Sbjct: 299 VACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFSYNGQCPQDI-- 356
Query: 291 SAGSVNSSCT----AGGGQLYM-WGKLKNNG--DDWMYPKP 324
GS + C +GG Q + + +N G DD+ P
Sbjct: 357 --GSEDYFCVKRIFSGGDQSFSHYSSPQNCGPPDDFRCSDP 395
Score = 270 (100.1 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 100/363 (27%), Positives = 159/363 (43%)
Query: 29 CWD--AVGRRK-GALDGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGR 84
CW + G+ G +D +V P R V +R V GC H V V +G YT G
Sbjct: 3 CWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDV--GCGLRHTVFVLDDGTVYTCGC 60
Query: 85 NERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG- 143
N+ GQLGH +K R +P V L I G +HT+ + + G A+G + GQLG
Sbjct: 61 NDLGQLGH-EK-SRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGL 118
Query: 144 SGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNE 202
GS P ++ L ++ ACG ++ LS + + + G +YGQLG G D +
Sbjct: 119 QGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS--KASEVFCWGQNKYGQLGLGIDCQ 176
Query: 203 YNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
T P+ I +L G ++VA G H+ + G ++ WG +G+LG
Sbjct: 177 KQTS-------------PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 263 HREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSC-TAGGGQLYM----WGKLKNNGD 317
++ D +VP + + ++ I G +++ T GG +G+L +N
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIV----YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNST 279
Query: 318 DW-MYPKPLMDLSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAM 374
+ P+ + +L G + + G H FV + S+G G+LG G + S
Sbjct: 280 SHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 375 PKK 377
K
Sbjct: 340 TVK 342
Score = 216 (81.1 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 92/328 (28%), Positives = 140/328 (42%)
Query: 82 WGRNERGQLGHGDKIQRD---RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
WG GQLG G I + P K++ G G HTV V +DG G N
Sbjct: 4 WGNASYGQLGLGG-IDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCND 62
Query: 139 HGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
GQLG R + P V L ++ + A ACG T+ L+ +G + GL GQLG
Sbjct: 63 LGQLGHEKSRKK--PEQVVALDAQNIVAVACGEAHTLALND-KG-QVYAWGLDSDGQLG- 117
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
+ +++ PR I +L+ IV+VACG H++A+ V+ WG
Sbjct: 118 -----LQGSEECIRV-------PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165
Query: 258 YGRLGHR-EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVN--SSCTAGGGQLYMWGKLKN 314
YG+LG + + + P+ + + A + V S G G+ +G+L
Sbjct: 166 YGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGR-NKFGQLGL 224
Query: 315 NGDDWMY-PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSS 372
N ++ Y P L L + + G H + + ++G YG+LG+ + +
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN 284
Query: 373 AMPKKVDILEGMHVISVACGYGHSLVIV 400
P+KV L G V VACG H+ V
Sbjct: 285 --PRKVFELMGSIVTQVACGRQHTSAFV 310
Score = 207 (77.9 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 72/284 (25%), Positives = 116/284 (40%)
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRC-LVSEVTATACGADFTVWLSSVEGASILNAGLP 190
L +G +GQLG G I EI P R G + ++ ++ G
Sbjct: 2 LCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCN 61
Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
GQLGH + S K +P + AL + IV VACG HT+A++ KG V
Sbjct: 62 DLGQLGH---------EKSRK-------KPEQVVALDAQNIVAVACGEAHTLALNDKGQV 105
Query: 251 YTWGFGGYGRLGHREQKD-EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
Y WG G+LG + ++ VPR + ++ ++ G +S + +++ W
Sbjct: 106 YAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQ----VACGYYHSLALSKASEVFCW 161
Query: 310 GKLKNN----GDDWMY---PKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGE 361
G+ K G D P+ + L G + +G H FV S I WG ++G+
Sbjct: 162 GQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 362 LGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG + +P + L ++ + CG H+ + V
Sbjct: 222 LGLND--ENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
>UNIPROTKB|F1S9B1 [details] [associations]
symbol:SERGEF "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050709 "negative regulation of protein secretion"
evidence=IEA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR027048 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005730 GO:GO:0045111 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GO:GO:0050709 GeneTree:ENSGT00700000104160 PANTHER:PTHR22870:SF7
EMBL:CU914672 EMBL:CU467662 EMBL:CU693468
Ensembl:ENSSSCT00000014607 OMA:VYQWGTG Uniprot:F1S9B1
Length = 338
Score = 248 (92.4 bits), Expect = 6.5e-21, P = 6.5e-21
Identities = 92/318 (28%), Positives = 137/318 (43%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYK-IKKAGAGRSHTVVVTEDGNSLAFGWNK 138
+ WG N GQLG G K P +SE K +K+ G H+ +VT+ G+ G NK
Sbjct: 18 FAWGANSYGQLGLGHKEDVLLPQQLSEFCKPGCVKRITGGGGHSAIVTDQGSLFVCGLNK 77
Query: 139 HGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLG- 196
GQLG G + + + + L+ + ACG DFT+ L+ + +L+ G +GQLG
Sbjct: 78 DGQLGLGHTEDVLYFTLCKSLLGCPIQQVACGWDFTIILT--KNGQVLSCGSNSFGQLGV 135
Query: 197 -HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
HG + V A E Q E +V +A G H +A + G V+ WG
Sbjct: 136 PHGP------RRCVVPQAIEVQR----------EKVVSIAAGLRHALAATASGLVFQWGT 179
Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLP----PEAV-ISAGSVNSSCTAGGGQLYMWG 310
G G R + +P + + + V +AV + AGS +S+ G+LY+WG
Sbjct: 180 G-LASSGRRLCPGQTLPLFLTAKEPSKVTVGLENSQAVCVLAGSGHSASLTDAGELYVWG 238
Query: 311 KLKNN---GDDWMYPKPLM----DLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGEL 362
K+ P P + + SG H ++ + +WG A YG+L
Sbjct: 239 SNKHGQLASQAAFLPLPQKIEAHRFQNEKVAAVWSGWTHLVAQTETGKVFTWGRADYGQL 298
Query: 363 GY---GPYGQKSSAMPKK 377
G P G K PKK
Sbjct: 299 GRTLESPEGWK----PKK 312
Score = 154 (59.3 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 62/232 (26%), Positives = 95/232 (40%)
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVS 105
T + L+G I+ VA G + + G+ + G N GQLG HG + + P +
Sbjct: 93 TLCKSLLGCPIQQVACGWD--FTIILTKNGQVLSCGSNSFGQLGVPHGPR-RCVVPQAI- 148
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA 165
E+ + K+ AG H + T G L F W G SG + P+ E +
Sbjct: 149 EVQREKVVSIAAGLRHALAATASG--LVFQWGT-GLASSGRRLCPGQTLPLFLTAKEPSK 205
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
G + + + + G+ +A L G+L N++ S P P+ I A
Sbjct: 206 VTVGLENSQAVCVLAGSGH-SASLTDAGELYVWGSNKHGQLASQAAFL----PLPQKIEA 260
Query: 226 --LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHR-EQKDEWVPRR 274
E + V G H VA G V+TWG YG+LG E + W P++
Sbjct: 261 HRFQNEKVAAVWSGWTHLVAQTETGKVFTWGRADYGQLGRTLESPEGWKPKK 312
Score = 151 (58.2 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 55/246 (22%), Positives = 100/246 (40%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H V +G + G N+ GQLG G T+ L I++ G T+++T++
Sbjct: 60 HSAIVTDQGSLFVCGLNKDGQLGLGHTEDVLYFTLCKSLLGCPIQQVACGWDFTIILTKN 119
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
G L+ G N GQLG + P RC+V + ++ + +G
Sbjct: 120 GQVLSCGSNSFGQLG-------VPHGPRRCVVPQAIEVQREKVVSIAAGLRHALAATASG 172
Query: 189 LP-QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
L Q+G G + ++ L A+ + L V V G+ H+ ++
Sbjct: 173 LVFQWGT-GLASSGRRLCPGQTLPLFLTAKEPSKVTVGLENSQAVCVLAGSGHSASLTDA 231
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDV--FQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
G +Y WG +G+L + +P++++ FQ V A + +G + G+
Sbjct: 232 GELYVWGSNKHGQLASQAAFLP-LPQKIEAHRFQNEKV----AAVWSGWTHLVAQTETGK 286
Query: 306 LYMWGK 311
++ WG+
Sbjct: 287 VFTWGR 292
Score = 114 (45.2 bits), Expect = 0.00080, P = 0.00080
Identities = 36/155 (23%), Positives = 75/155 (48%)
Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
++ WG YG+LG ++D +P+++ F + + I+ G +S+ G L++
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLLPQQLSEFCKPGCVKR---ITGGGGHSAIVTDQGSLFVC 73
Query: 310 GKLKNN--G----DDWMYPKPLMDLSGWNLRCMDSG-NMHHFVGADSSCISWGHAQYGEL 362
G K+ G +D +Y L G ++ + G + + + +S G +G+L
Sbjct: 74 GLNKDGQLGLGHTEDVLYFTLCKSLLGCPIQQVACGWDFTIILTKNGQVLSCGSNSFGQL 133
Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G P+G + +P+ +++ + V+S+A G H+L
Sbjct: 134 GV-PHGPRRCVVPQAIEV-QREKVVSIAAGLRHAL 166
>RGD|1310971 [details] [associations]
symbol:Herc4 "HECT and RLD domain containing E3 ubiquitin
protein ligase 4" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;IBA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IBA]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA;ISO;ISS]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=IBA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143 RGD:1310971
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829 GO:GO:0005634
GO:GO:0005737 GO:GO:0030154 GO:GO:0007283 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 GeneTree:ENSGT00660000095216
HOGENOM:HOG000208452 HOVERGEN:HBG050878 HSSP:Q9UEP9 CTD:26091
KO:K10615 OMA:KLVIQPT OrthoDB:EOG44XJG1 EMBL:BC087104
IPI:IPI00360837 RefSeq:NP_001012074.1 UniGene:Rn.18143
ProteinModelPortal:Q5PQN1 PhosphoSite:Q5PQN1 PRIDE:Q5PQN1
Ensembl:ENSRNOT00000051367 GeneID:309758 KEGG:rno:309758
UCSC:RGD:1310971 InParanoid:Q5PQN1 NextBio:661276
ArrayExpress:Q5PQN1 Genevestigator:Q5PQN1 Uniprot:Q5PQN1
Length = 1057
Score = 271 (100.5 bits), Expect = 7.3e-21, P = 7.3e-21
Identities = 81/261 (31%), Positives = 118/261 (45%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTIVSELSKYKIKKA 115
DI+ V C H +A+ + WG+N+ GQLG G + Q+ P ++ L +
Sbjct: 136 DIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQV 195
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTV 174
AG +H+ V+T G +G NK GQLG + P+ ++ L S+ + CG D T
Sbjct: 196 AAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTA 255
Query: 175 WLSSVEGASILNAGLPQYGQLGHG-TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
L+ G AG YGQLGH T +E N PR + L G + +
Sbjct: 256 ALTKEGGVFTFGAG--GYGQLGHNSTSHEIN---------------PRKVFELMGSIVTQ 298
Query: 234 VACGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV--DVFQRNNVLPPEAVI 290
+ACG HT A V S G +Y++G GG G+LG + P V + F N P +
Sbjct: 299 IACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFSYNGQCPQDI-- 356
Query: 291 SAGSVNSSCT----AGGGQLY 307
GS + C +GG Q +
Sbjct: 357 --GSEDYFCVKRIFSGGDQSF 375
Score = 269 (99.8 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 82/276 (29%), Positives = 135/276 (48%)
Query: 48 TRLRP--LVGVDIR-FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG-HGDKIQRDRPTI 103
+R +P +V +D + VA C H +A++ +G+ Y WG + GQLG G + P
Sbjct: 71 SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRN 130
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCLVS- 161
+ LS +I + G H++ +++ +G NK+GQLG G + + P ++ L+
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGI 190
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
A G + L+ + GA I G ++GQLG +N D V P
Sbjct: 191 PFMQVAAGGAHSFVLT-LSGA-IFGWGRNKFGQLGLNDEN-----DRYV---------PN 234
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
+ +L + IV + CG +HT A+ +G V+T+G GGYG+LGH E PR+V F+
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELM 292
Query: 282 NVLPPEAVISAGSVNSSC-TAGGGQLYMWGKLKNNG 316
+ + I+ G ++S G++Y +G L NG
Sbjct: 293 GSIVTQ--IACGRQHTSAFVPSSGRIYSFG-LGGNG 325
Score = 219 (82.2 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 59/158 (37%), Positives = 77/158 (48%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
SP ++ L+G+ VAAG H + + G + WGRN+ GQLG D+ R P ++
Sbjct: 180 SPQLIKSLLGIPFMQVAAG--GAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK 237
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L KI G HT +T++G FG +GQLG S +EI P V L+ S VT
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHG-TDN 201
ACG T G I + GL GQLG G T N
Sbjct: 298 QIACGRQHTSAFVPSSGR-IYSFGLGGNGQLGTGSTSN 334
Score = 215 (80.7 bits), Expect = 2.8e-14, P = 2.8e-14
Identities = 91/328 (27%), Positives = 140/328 (42%)
Query: 82 WGRNERGQLGHGDKIQRD---RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
WG GQLG G I + P K++ G G HTV V +DG G N
Sbjct: 4 WGNASYGQLGLGG-IDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCND 62
Query: 139 HGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
GQLG R + P V L ++ + A +CG T+ L+ +G + GL GQLG
Sbjct: 63 LGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALND-KG-QVYAWGLDSDGQLG- 117
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
+ +++ PR I +L+ IV+VACG H++A+ V+ WG
Sbjct: 118 -----LQGSEECIRV-------PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165
Query: 258 YGRLGHR-EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVN--SSCTAGGGQLYMWGKLKN 314
YG+LG E + + P+ + + A + V S G G+ +G+L
Sbjct: 166 YGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGR-NKFGQLGL 224
Query: 315 NGDDWMY-PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSS 372
N ++ Y P L L + + G H + + ++G YG+LG+ + +
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN 284
Query: 373 AMPKKVDILEGMHVISVACGYGHSLVIV 400
P+KV L G V +ACG H+ V
Sbjct: 285 --PRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 197 (74.4 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 69/284 (24%), Positives = 116/284 (40%)
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRC-LVSEVTATACGADFTVWLSSVEGASILNAGLP 190
L +G +GQLG G I EI P + G + ++ ++ G
Sbjct: 2 LCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCN 61
Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
GQLGH + S K +P + AL + IV V+CG HT+A++ KG V
Sbjct: 62 DLGQLGH---------EKSRK-------KPEQVVALDAQNIVAVSCGEAHTLALNDKGQV 105
Query: 251 YTWGFGGYGRLGHREQKD-EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
Y WG G+LG + ++ VPR + ++ ++ G +S + +++ W
Sbjct: 106 YAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQ----VACGYYHSLALSKASEVFCW 161
Query: 310 GKLKNN----GDDWMY---PKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGE 361
G+ K G + P+ + L G + +G H FV S I WG ++G+
Sbjct: 162 GQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 362 LGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG + +P + L ++ + CG H+ + V
Sbjct: 222 LGLND--ENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Score = 138 (53.6 bits), Expect = 9.4e-06, P = 9.4e-06
Identities = 37/112 (33%), Positives = 49/112 (43%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P L+ L I ++ G H A+ EG +T+G GQLGH P V E
Sbjct: 233 PNLLKSLRSQKIVYICCG--EDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 290
Query: 107 LSKYKIKKAGAGRSHT-VVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
L + + GR HT V G +FG +GQLG+GS N P V+
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
>UNIPROTKB|Q3MHW0 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9913 "Bos taurus" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0050709 "negative regulation of protein
secretion" evidence=IEA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=IEA] InterPro:IPR027048 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0005730 GO:GO:0045111 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
eggNOG:COG5184 GeneTree:ENSGT00700000104160 EMBL:BC104610
IPI:IPI00689945 RefSeq:NP_001069489.1 UniGene:Bt.1247
ProteinModelPortal:Q3MHW0 STRING:Q3MHW0 PRIDE:Q3MHW0
Ensembl:ENSBTAT00000007022 GeneID:534377 KEGG:bta:534377 CTD:26297
HOGENOM:HOG000154414 HOVERGEN:HBG051746 InParanoid:Q3MHW0 KO:K15421
OMA:NIWAPKP OrthoDB:EOG4J1183 NextBio:20876380
PANTHER:PTHR22870:SF7 Uniprot:Q3MHW0
Length = 464
Score = 259 (96.2 bits), Expect = 9.2e-21, Sum P(2) = 9.2e-21
Identities = 92/309 (29%), Positives = 134/309 (43%)
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK-IKKAGAGRSHTVVVTEDGN 130
AV + WG N GQLG G K +S+ K IK+ G H+ VVT++G+
Sbjct: 10 AVPTAAALFAWGANSYGQLGLGHKEDVLSAQQLSDFCKSGCIKRITGGGGHSAVVTDEGS 69
Query: 131 SLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGL 189
G NK GQLG G + +P + L+ + ACG DFT+ L+ E +L+ G
Sbjct: 70 LFVCGLNKDGQLGLGHTEEVLYFTPCKSLLGCAIQQVACGWDFTIILT--ENGQVLSCGS 127
Query: 190 PQYGQLG--HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
+GQLG HG + + P+AI L E +V +A G H +A +
Sbjct: 128 NSFGQLGVPHGP------RRCVI---------PQAIELLR-EKVVSIAAGLRHALAATAS 171
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE---AV-ISAGSVNSSCTAGG 303
G V+ WG G G R + +P + + + V E AV + AGS +S+
Sbjct: 172 GTVFQWGTG-LASSGRRLCPGQTLPLFLTAKEPSTVTGLENSQAVCVLAGSDHSASLTDA 230
Query: 304 GQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMH-------HFVG--ADSSCISW 354
G+LY+WG K+ G L+ RC + + H V +W
Sbjct: 231 GELYVWGSNKH-GQLASQAAFLLLPQRIEARCFQNEKIAAVWSGWTHLVAQTVTGKVFTW 289
Query: 355 GHAQYGELG 363
G A YG+LG
Sbjct: 290 GRADYGQLG 298
Score = 201 (75.8 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 89/371 (23%), Positives = 146/371 (39%)
Query: 60 FVAAGCVSC------HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIK 113
F +GC+ H V EG + G N+ GQLG G + T L I+
Sbjct: 45 FCKSGCIKRITGGGGHSAVVTDEGSLFVCGLNKDGQLGLGHTEEVLYFTPCKSLLGCAIQ 104
Query: 114 KAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSPVRCLVSEVTATACGADF 172
+ G T+++TE+G L+ G N GQLG R + P + L +V + A G
Sbjct: 105 QVACGWDFTIILTENGQVLSCGSNSFGQLGVPHGPRRCVIPQAIELLREKVVSIAAGLRH 164
Query: 173 TVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIV 232
L++ ++ Q+G G + ++ L A+ P + L V
Sbjct: 165 A--LAATASGTVF-----QWGT-GLASSGRRLCPGQTLPLFLTAK-EPSTVTGLENSQAV 215
Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV--FQRNNVLPPEAVI 290
V G++H+ ++ G +Y WG +G+L + +P+R++ FQ + A +
Sbjct: 216 CVLAGSDHSASLTDAGELYVWGSNKHGQLAS-QAAFLLLPQRIEARCFQNEKI----AAV 270
Query: 291 SAGSVNSSCTAGGGQLYMWGKLK--------NNGDDWMYPK--PLMDLSGWN------LR 334
+G + G+++ WG+ + W K P + SG L
Sbjct: 271 WSGWTHLVAQTVTGKVFTWGRADYGQLGRTVETREGWESEKQDPSLPGSGPQKGTPSCLP 330
Query: 335 CMDS------GNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVIS 388
C+ G+ H+ C SWG ++G G G + PK V L +
Sbjct: 331 CLTGATEISCGSEHNLAVIGGVCHSWGWNEHGMCGDGT--EADVWAPKPVPGLRFFLGLH 388
Query: 389 VACGYGHSLVI 399
V CG GHSL +
Sbjct: 389 VGCGAGHSLAL 399
Score = 40 (19.1 bits), Expect = 9.2e-21, Sum P(2) = 9.2e-21
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
G GP QK + P + L G IS CG H+L ++
Sbjct: 318 GSGP--QKGT--PSCLPCLTGATEIS--CGSEHNLAVI 349
>UNIPROTKB|Q9UII4 [details] [associations]
symbol:HERC5 "E3 ISG15--protein ligase HERC5" species:9606
"Homo sapiens" [GO:0051607 "defense response to virus"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0005737
"cytoplasm" evidence=IBA] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IBA] [GO:0032020 "ISG15-protein conjugation" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042296 "ISG15
ligase activity" evidence=IDA] [GO:0050688 "regulation of defense
response to virus" evidence=IDA] [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0019221
"cytokine-mediated signaling pathway" evidence=TAS] [GO:0032480
"negative regulation of type I interferon production" evidence=TAS]
[GO:0045087 "innate immune response" evidence=TAS] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 EMBL:AY337518
EMBL:AB027289 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829
GO:GO:0005634 GO:GO:0048471 Reactome:REACT_6900 GO:GO:0000079
GO:GO:0045087 GO:GO:0019221 GO:GO:0051607 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
GO:GO:0032480 GO:GO:0050688 SUPFAM:SSF56204 eggNOG:COG5021
HOGENOM:HOG000208452 HOVERGEN:HBG050878 EMBL:AC083829 EMBL:BC140716
IPI:IPI00008821 RefSeq:NP_057407.2 UniGene:Hs.26663
ProteinModelPortal:Q9UII4 SMR:Q9UII4 DIP:DIP-44200N IntAct:Q9UII4
STRING:Q9UII4 PhosphoSite:Q9UII4 DMDM:296434523 PaxDb:Q9UII4
PRIDE:Q9UII4 Ensembl:ENST00000264350 GeneID:51191 KEGG:hsa:51191
UCSC:uc003hrt.3 CTD:51191 GeneCards:GC04P089378 H-InvDB:HIX0200636
HGNC:HGNC:24368 HPA:HPA043929 MIM:608242 neXtProt:NX_Q9UII4
PharmGKB:PA134973940 InParanoid:Q9UII4 OMA:KDWITNT
OrthoDB:EOG4N30N6 PhylomeDB:Q9UII4 GenomeRNAi:51191 NextBio:54182
ArrayExpress:Q9UII4 Bgee:Q9UII4 CleanEx:HS_HERC5
Genevestigator:Q9UII4 GermOnline:ENSG00000138646 GO:GO:0042296
GO:GO:0032020 Uniprot:Q9UII4
Length = 1024
Score = 270 (100.1 bits), Expect = 9.6e-21, P = 9.6e-21
Identities = 80/262 (30%), Positives = 129/262 (49%)
Query: 59 RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI-QRDRPTIVSELSKYKIKKAGA 117
+ + C H +A+ G + WG+N GQLG G K P IV L+ + + A
Sbjct: 139 KIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISA 198
Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWL 176
G +H++ ++ GN ++G N+ GQLG G ++ +PS + L ++ V ACG + L
Sbjct: 199 GEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALL 258
Query: 177 SSVEGASILNAGLPQYGQLGHG-TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
+ +G + G ++GQLGH T NE RP +A L G + ++A
Sbjct: 259 TQ-DGL-LFTFGAGKHGQLGHNSTQNEL---------------RPCLVAELVGYRVTQIA 301
Query: 236 CGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
CG HT+A V G V+++G G G+LG+ +D+ +P V V + L E+ S
Sbjct: 302 CGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKV-SSSEELKLESHTSEKE 360
Query: 295 VNSSCTAGGGQ-LYMWGKLKNN 315
+ AGG Q + +W K +N+
Sbjct: 361 L--IMIAGGNQSILLWIKKENS 380
Score = 256 (95.2 bits), Expect = 5.0e-19, P = 5.0e-19
Identities = 65/189 (34%), Positives = 98/189 (51%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+P + L GV + ++AG H +A+ + G Y+WG+NE GQLG G +D P+++
Sbjct: 181 TPQIVEHLAGVPLAQISAG--EAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIE 238
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVT 164
L K++ G SH+ ++T+DG FG KHGQLG S +NE+ P V LV VT
Sbjct: 239 GLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVT 298
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEY----NTK-DSSVKLAYEAQPR 219
ACG T+ S G + + G + GQLG+G + K SS +L E+
Sbjct: 299 QIACGRWHTLAYVSDLG-KVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELKLESHTS 357
Query: 220 PRAIAALAG 228
+ + +AG
Sbjct: 358 EKELIMIAG 366
Score = 151 (58.2 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 48/183 (26%), Positives = 82/183 (44%)
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG-HREQKDEWVPRRVDVFQRNNVL 284
L + I+++ CG H++A+ G ++ WG +G+LG R+ P+ V+ V
Sbjct: 135 LQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLA--GV- 191
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMDS 338
P A ISAG +S + G +Y WGK + + + P + L + +
Sbjct: 192 -PLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVAC 250
Query: 339 GNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G H + D ++G ++G+LG+ ++ P V L G V +ACG H+L
Sbjct: 251 GGSHSALLTQDGLLFTFGAGKHGQLGHN--STQNELRPCLVAELVGYRVTQIACGRWHTL 308
Query: 398 VIV 400
V
Sbjct: 309 AYV 311
Score = 150 (57.9 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 49/169 (28%), Positives = 78/169 (46%)
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCLVSEV 163
S L + KI + G H++ +++ G A+G N HGQLG G + P V L
Sbjct: 133 SILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVP 192
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
A + S+ G +I + G + GQLG G +T E++ P I
Sbjct: 193 LAQISAGEAHSMALSMSG-NIYSWGKNECGQLGLG-----HT---------ESKDDPSLI 237
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
L + + VACG +H+ + G ++T+G G +G+LGH ++E P
Sbjct: 238 EGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRP 286
Score = 141 (54.7 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 57/229 (24%), Positives = 99/229 (43%)
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
++ CG ++ LS +G + G +GQLG G + + P+
Sbjct: 139 KIIQITCGDYHSLALS--KGGELFAWGQNLHGQLGVGRK-------------FPSTTTPQ 183
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG--HREQKDEWVPRRVDVFQ 279
+ LAG + +++ G H++A+ G +Y+WG G+LG H E KD+ P ++
Sbjct: 184 IVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDD--PSLIEGLD 241
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNL 333
V E V GS +S+ G L+ +G K N+ + + P + +L G+ +
Sbjct: 242 NQKV---EFVACGGS-HSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRV 297
Query: 334 RCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
+ G H +V S+G + G+LG G G + MP V +
Sbjct: 298 TQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNG--GTRDQLMPLPVKV 344
>UNIPROTKB|F1NCH3 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
OMA:KLVIQPT EMBL:AADN02028016 IPI:IPI00586918
Ensembl:ENSGALT00000006135 ArrayExpress:F1NCH3 Uniprot:F1NCH3
Length = 1048
Score = 270 (100.1 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 98/362 (27%), Positives = 155/362 (42%)
Query: 29 CWD--AVGRRK-GALDGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGR 84
CW + G+ G +D +V P + + IR V GC H V V +G YT G
Sbjct: 3 CWGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDV--GCGLRHTVFVLDDGTVYTCGC 60
Query: 85 NERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGS 144
N+ GQLGH +K R RP V L I G +HT+ + + G A+G GQLG
Sbjct: 61 NDLGQLGH-EKA-RKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGL 118
Query: 145 GSIRNEIE-PSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNE 202
I P ++ L ++ ACG ++ LS +G+ + + G +YGQLG G +
Sbjct: 119 PGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALS--KGSEVFSWGQNKYGQLGLGYE-- 174
Query: 203 YNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
Y+ Q P I +L G ++A G H+ + G ++ WG +G+LG
Sbjct: 175 -----------YKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 263 HREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM----WGKLKNNGDD 318
+ D +VP + + V+ + ++ T GG +G+L +N
Sbjct: 224 LNDDNDRYVPTLLKSLRTQKVVH---ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 319 W-MYPKPLMDLSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMP 375
+ P+ + +L G + + G H FV + S+G G+LG G + S
Sbjct: 281 HEINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFT 340
Query: 376 KK 377
K
Sbjct: 341 VK 342
Score = 245 (91.3 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 97/332 (29%), Positives = 150/332 (45%)
Query: 82 WGRNERGQLGHG---DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
WG GQLG G ++I + L+K +I+ G G HTV V +DG G N
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFLNK-RIRDVGCGLRHTVFVLDDGTVYTCGCND 62
Query: 139 HGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLG- 196
GQLG R P V L ++ + A +CG T+ L+ +G + GL GQLG
Sbjct: 63 LGQLGHEKARKR--PEHVGALDAQNIVAVSCGEAHTLALND-KG-QVYAWGLATDGQLGL 118
Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
GT+ +++ PR I +L+ IV+VACG H++A+ V++WG
Sbjct: 119 PGTEE-------CIRV-------PRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQN 164
Query: 257 GYGRLG-HREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK-- 313
YG+LG E K + P + ++ + P A I+AG +S G ++ WG+ K
Sbjct: 165 KYGQLGLGYEYKKQNSPHVI----KSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 314 ----NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYG 368
N+ +D P L L + + G H + + ++G YG+LG+
Sbjct: 221 QLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 369 QKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+ + P+KV L G V + CG H+ V
Sbjct: 281 HEIN--PRKVFELMGSLVTQITCGRQHTTAFV 310
Score = 220 (82.5 bits), Expect = 7.6e-15, P = 7.6e-15
Identities = 63/177 (35%), Positives = 84/177 (47%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
SP ++ L+G+ +AAG H + + G + WGRN+ GQLG D R PT++
Sbjct: 180 SPHVIKSLLGIPFAQIAAG--GAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLK 237
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L K+ G HT +T++G FG +GQLG S +EI P V L+ S VT
Sbjct: 238 SLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSLVT 297
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS-SVK---LAYEAQ 217
CG T G I + GL GQLG GT + N K +VK L Y Q
Sbjct: 298 QITCGRQHTTAFVPSSGR-IYSFGLGGNGQLGTGTTS--NRKSPFTVKGNWLPYSTQ 351
Score = 203 (76.5 bits), Expect = 6.2e-13, P = 6.2e-13
Identities = 73/284 (25%), Positives = 116/284 (40%)
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRC-LVSEVTATACGADFTVWLSSVEGASILNAGLP 190
L +G GQLG G I EI P + G + ++ ++ G
Sbjct: 2 LCWGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCN 61
Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
GQLGH +A+ RP + AL + IV V+CG HT+A++ KG V
Sbjct: 62 DLGQLGHE----------------KARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQV 105
Query: 251 YTWGFGGYGRLGHREQKD-EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
Y WG G+LG ++ VPR + ++ ++ G +S + G +++ W
Sbjct: 106 YAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQ----VACGYYHSLALSKGSEVFSW 161
Query: 310 GKLKNN--GDDWMYPK---P--LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGE 361
G+ K G + Y K P + L G + +G H FV S I WG ++G+
Sbjct: 162 GQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 362 LGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG + +P + L V+ + CG H+ + V
Sbjct: 222 LGLNDDNDRY--VPTLLKSLRTQKVVHICCGEDHTAALTKEGGV 263
>UNIPROTKB|Q5GLZ8 [details] [associations]
symbol:HERC4 "Probable E3 ubiquitin-protein ligase HERC4"
species:9606 "Homo sapiens" [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0007283
"spermatogenesis" evidence=ISS] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829 GO:GO:0005634
GO:GO:0005737 GO:GO:0030154 GO:GO:0007283 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 HOGENOM:HOG000208452
HOVERGEN:HBG050878 EMBL:AY221963 EMBL:AY650032 EMBL:AY650033
EMBL:AY650034 EMBL:AB046813 EMBL:AL356741 EMBL:AC024258
EMBL:AL133551 EMBL:BC039600 IPI:IPI00333067 IPI:IPI00552050
IPI:IPI00604497 IPI:IPI00827523 IPI:IPI00827948 IPI:IPI00827992
RefSeq:NP_056416.2 RefSeq:NP_071362.1 UniGene:Hs.51891 HSSP:Q9UEP9
ProteinModelPortal:Q5GLZ8 SMR:Q5GLZ8 IntAct:Q5GLZ8 STRING:Q5GLZ8
PhosphoSite:Q5GLZ8 DMDM:74707832 PaxDb:Q5GLZ8 PRIDE:Q5GLZ8
DNASU:26091 Ensembl:ENST00000277817 Ensembl:ENST00000373700
Ensembl:ENST00000395187 Ensembl:ENST00000395198
Ensembl:ENST00000412272 Ensembl:ENST00000473533
Ensembl:ENST00000492996 GeneID:26091 KEGG:hsa:26091 UCSC:uc001jng.4
UCSC:uc001jnh.4 UCSC:uc001jnk.3 UCSC:uc009xpr.3 CTD:26091
GeneCards:GC10M069681 HGNC:HGNC:24521 HPA:HPA045453 MIM:609248
neXtProt:NX_Q5GLZ8 PharmGKB:PA134949021 InParanoid:Q5GLZ8 KO:K10615
ChiTaRS:HERC4 GenomeRNAi:26091 NextBio:48027 ArrayExpress:Q5GLZ8
Bgee:Q5GLZ8 CleanEx:HS_HERC4 Genevestigator:Q5GLZ8 Uniprot:Q5GLZ8
Length = 1057
Score = 270 (100.1 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 83/276 (30%), Positives = 136/276 (49%)
Query: 48 TRLRP--LVGVDIR-FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTI 103
+R +P +V +D + VA C H +A++ +G+ Y WG + GQLG + R P
Sbjct: 71 SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRN 130
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSPVRCLVS- 161
+ LS +I + G H++ +++ +G NK+GQLG G+ + + P ++ L+
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGI 190
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
A G + L+ + GA I G ++GQLG +N D V P
Sbjct: 191 PFMQVAAGGAHSFVLT-LSGA-IFGWGRNKFGQLGLNDEN-----DRYV---------PN 234
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
+ +L + IV + CG +HT A+ +G V+T+G GGYG+LGH E PR+V F+
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELM 292
Query: 282 NVLPPEAVISAGSVNSSC-TAGGGQLYMWGKLKNNG 316
+ E I+ G ++S G++Y +G L NG
Sbjct: 293 GSIVTE--IACGRQHTSAFVPSSGRIYSFG-LGGNG 325
Score = 270 (100.1 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 84/286 (29%), Positives = 126/286 (44%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DKIQRDRPTIVSELSKYKIKKA 115
DI+ V C H +A+ + WG+N+ GQLG G D ++ P ++ L +
Sbjct: 136 DIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQV 195
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTV 174
AG +H+ V+T G +G NK GQLG + P+ ++ L S+ + CG D T
Sbjct: 196 AAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTA 255
Query: 175 WLSSVEGASILNAGLPQYGQLGHG-TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
L+ G AG YGQLGH T +E N PR + L G + +
Sbjct: 256 ALTKEGGVFTFGAG--GYGQLGHNSTSHEIN---------------PRKVFELMGSIVTE 298
Query: 234 VACGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV--DVFQRNNVLPPEAVI 290
+ACG HT A V S G +Y++G GG G+LG + P V + + N P+
Sbjct: 299 IACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQCLPDIDS 358
Query: 291 SAGSVNSSCTAGGGQLYM-WGKLKNNG--DDWMYPKPLMDLSGWNL 333
+GG Q + + +N G DD+ P P + W +
Sbjct: 359 EEYFCVKRIFSGGDQSFSHYSSPQNCGPPDDFRCPNPTKQI--WTV 402
Score = 221 (82.9 bits), Expect = 5.9e-15, P = 5.9e-15
Identities = 60/158 (37%), Positives = 77/158 (48%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
SP L+ L+G+ VAAG H + + G + WGRN+ GQLG D+ R P ++
Sbjct: 180 SPQLLKSLLGIPFMQVAAG--GAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK 237
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L KI G HT +T++G FG +GQLG S +EI P V L+ S VT
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHG-TDN 201
ACG T G I + GL GQLG G T N
Sbjct: 298 EIACGRQHTSAFVPSSGR-IYSFGLGGNGQLGTGSTSN 334
Score = 210 (79.0 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 91/328 (27%), Positives = 140/328 (42%)
Query: 82 WGRNERGQLGHGDKIQRD---RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
WG GQLG G I + P +++ G G HTV V +DG G N
Sbjct: 4 WGNASFGQLGLGG-IDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCND 62
Query: 139 HGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
GQLG R + P V L ++ + A +CG T+ L+ +G + GL GQLG
Sbjct: 63 LGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALND-KG-QVYAWGLDSDGQLGL 118
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
E +++ PR I +L+ IV+VACG H++A+ V+ WG
Sbjct: 119 VGSEE------CIRV-------PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165
Query: 258 YGRLG-HREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVN--SSCTAGGGQLYMWGKLKN 314
YG+LG + K + P+ + + A + V S G G+ +G+L
Sbjct: 166 YGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGR-NKFGQLGL 224
Query: 315 NGDDWMY-PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSS 372
N ++ Y P L L + + G H + + ++G YG+LG+ + +
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN 284
Query: 373 AMPKKVDILEGMHVISVACGYGHSLVIV 400
P+KV L G V +ACG H+ V
Sbjct: 285 --PRKVFELMGSIVTEIACGRQHTSAFV 310
Score = 197 (74.4 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 71/284 (25%), Positives = 114/284 (40%)
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRC-LVSEVTATACGADFTVWLSSVEGASILNAGLP 190
L +G GQLG G I EI P + G + ++ ++ G
Sbjct: 2 LCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCN 61
Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
GQLGH + S K +P + AL + IV V+CG HT+A++ KG V
Sbjct: 62 DLGQLGH---------EKSRK-------KPEQVVALDAQNIVAVSCGEAHTLALNDKGQV 105
Query: 251 YTWGFGGYGRLGHREQKD-EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
Y WG G+LG ++ VPR + ++ ++ G +S + +++ W
Sbjct: 106 YAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQ----VACGYYHSLALSKASEVFCW 161
Query: 310 GKLKNN----GDDWMY---PKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGE 361
G+ K G D P+ L L G + +G H FV S I WG ++G+
Sbjct: 162 GQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 362 LGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG + +P + L ++ + CG H+ + V
Sbjct: 222 LGLND--ENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Score = 138 (53.6 bits), Expect = 9.4e-06, P = 9.4e-06
Identities = 37/112 (33%), Positives = 49/112 (43%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P L+ L I ++ G H A+ EG +T+G GQLGH P V E
Sbjct: 233 PNLLKSLRSQKIVYICCG--EDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 290
Query: 107 LSKYKIKKAGAGRSHT-VVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
L + + GR HT V G +FG +GQLG+GS N P V+
Sbjct: 291 LMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
>ZFIN|ZDB-GENE-090311-7 [details] [associations]
symbol:si:ch211-281g13.5 "si:ch211-281g13.5"
species:7955 "Danio rerio" [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-090311-7 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
eggNOG:COG5021 HOGENOM:HOG000208452 HOVERGEN:HBG050878
GeneTree:ENSGT00700000104312 EMBL:BX321880 IPI:IPI00899041
RefSeq:NP_001139103.1 UniGene:Dr.155114 Ensembl:ENSDART00000113315
GeneID:100148091 OMA:TLAWFPS NextBio:20791722 Uniprot:B8A4S7
Length = 992
Score = 269 (99.8 bits), Expect = 1.2e-20, P = 1.2e-20
Identities = 72/231 (31%), Positives = 116/231 (50%)
Query: 48 TRLRPLVGVDIR-FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG-HGDKIQRDRPTIVS 105
T RPL ++ R + C H +A+ +G+ + WG N GQLG ++ P +
Sbjct: 104 TVCRPLKSLENRQVIQIACGDQHSMALSNDGQLFVWGENTHGQLGLRKEQAGTQSPQHLQ 163
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEV 163
L + + + AG +H+ V++ G + FGW N GQLG G ++ P+ V+ L +
Sbjct: 164 SLCEIPVAQISAGGNHSFVLSLSG--VVFGWGSNSAGQLGLGDTKDRFVPTIVKSLCGKK 221
Query: 164 TAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
T + +CG + T LS +G ++ G +GQLGH + KD + PR
Sbjct: 222 TVSISCGGEHTATLS--KGGTVFTFGSGGFGQLGHNS-----LKD---------EHHPRL 265
Query: 223 IAALAGETIVKVACGTNHTVAVD-SKGYVYTWGFGGYGRLGHREQKDEWVP 272
IA L G + +V CG +HT+ + S +Y++G G G+LG+ EQ + VP
Sbjct: 266 IAELWGSKVSQVTCGRHHTLVFEESSKLIYSFGCGMQGQLGNGEQVKQSVP 316
Score = 191 (72.3 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 55/178 (30%), Positives = 76/178 (42%)
Query: 22 LLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
L G +G RK SP L+ L + + ++AG H + + G +
Sbjct: 136 LFVWGENTHGQLGLRKE--QAGTQSPQHLQSLCEIPVAQISAG--GNHSFVLSLSGVVFG 191
Query: 82 WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
WG N GQLG GD R PTIV L K G HT +++ G FG GQ
Sbjct: 192 WGSNSAGQLGLGDTKDRFVPTIVKSLCGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQ 251
Query: 142 LGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
LG S+++E P + L S+V+ CG T+ I + G GQLG+G
Sbjct: 252 LGHNSLKDEHHPRLIAELWGSKVSQVTCGRHHTLVFEE-SSKLIYSFGCGMQGQLGNG 308
Score = 187 (70.9 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 55/188 (29%), Positives = 88/188 (46%)
Query: 93 GDKIQRDRPTI---VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
G + D+ T+ + L ++ + G H++ ++ DG +G N HGQLG +
Sbjct: 95 GKVLIMDQSTVCRPLKSLENRQVIQIACGDQHSMALSNDGQLFVWGENTHGQLGLRKEQA 154
Query: 150 EIE-PSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD 207
+ P ++ L V + G + + LS + G + G GQLG G +TKD
Sbjct: 155 GTQSPQHLQSLCEIPVAQISAGGNHSFVLS-LSGV-VFGWGSNSAGQLGLG-----DTKD 207
Query: 208 SSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQK 267
V P + +L G+ V ++CG HT + G V+T+G GG+G+LGH K
Sbjct: 208 RFV---------PTIVKSLCGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLK 258
Query: 268 DEWVPRRV 275
DE PR +
Sbjct: 259 DEHHPRLI 266
Score = 161 (61.7 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 50/193 (25%), Positives = 85/193 (44%)
Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHR-EQKDEWVPRRVDVFQ 279
R + +L ++++ACG H++A+ + G ++ WG +G+LG R EQ P+ +
Sbjct: 107 RPLKSLENRQVIQIACGDQHSMALSNDGQLFVWGENTHGQLGLRKEQAGTQSPQHLQSLC 166
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GD--DWMYPKPLMDLSGWNL 333
P A ISAG +S + G ++ WG GD D P + L G
Sbjct: 167 EI----PVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTKDRFVPTIVKSLCGKKT 222
Query: 334 RCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
+ G H + + ++G +G+LG+ K P+ + L G V V CG
Sbjct: 223 VSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSL--KDEHHPRLIAELWGSKVSQVTCG 280
Query: 393 YGHSLVIVDRTNV 405
H+LV + + +
Sbjct: 281 RHHTLVFEESSKL 293
Score = 144 (55.7 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 38/119 (31%), Positives = 56/119 (47%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
PT ++ L G + V+ C H + G +T+G GQLGH P +++E
Sbjct: 211 PTIVKSLCGK--KTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLIAE 268
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT 164
L K+ + GR HT+V E + +FG GQLG+G + P PV L +E T
Sbjct: 269 LWGSKVSQVTCGRHHTLVFEESSKLIYSFGCGMQGQLGNGEQVKQSVPLPV-LLPTECT 326
Score = 140 (54.3 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 57/230 (24%), Positives = 106/230 (46%)
Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
P++ L + +V ACG ++ LS+ +G + G +GQLG + + T+
Sbjct: 108 PLKSLENRQVIQIACGDQHSMALSN-DG-QLFVWGENTHGQLGLRKE-QAGTQS------ 158
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P+ + +L + +++ G NH+ + G V+ WG G+LG + KD +VP
Sbjct: 159 ------PQHLQSLCEIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTKDRFVPT 212
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG-----KLKNNG-DDWMYPKPLMD 327
V + IS G +++ + GG ++ +G +L +N D +P+ + +
Sbjct: 213 IVKSLCGKKTVS----ISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLIAE 268
Query: 328 LSGWNLRCMDSGNMHHFVGADSSCI--SWGHAQYGELGYGPYGQKSSAMP 375
L G + + G H V +SS + S+G G+LG G ++S +P
Sbjct: 269 LWGSKVSQVTCGRHHTLVFEESSKLIYSFGCGMQGQLGNGEQVKQSVPLP 318
>ZFIN|ZDB-GENE-090311-56 [details] [associations]
symbol:si:ch73-190m4.1 "si:ch73-190m4.1"
species:7955 "Danio rerio" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0006464 "cellular protein modification process" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-090311-56
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00700000104312
EMBL:CR788312 EMBL:CU467858 IPI:IPI00933554 RefSeq:XP_688463.5
UniGene:Dr.113692 UniGene:Dr.113776 Ensembl:ENSDART00000111114
GeneID:559981 KEGG:dre:559981 NextBio:20883233 Uniprot:F1RDE7
Length = 992
Score = 269 (99.8 bits), Expect = 1.2e-20, P = 1.2e-20
Identities = 80/261 (30%), Positives = 125/261 (47%)
Query: 22 LLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIR-FVAAGCVSCHCVAVDVEGRCY 80
L+ CG + AV G + T PL G++ R + C H +A+ +G+ +
Sbjct: 83 LIVCGE--YGAVLLDDGGKVLIMDKSTECSPLKGLENRQVIQIACGDQHSMALTNDGQLF 140
Query: 81 TWGRNERGQLG-HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW--N 137
WG N GQLG ++ P + L + + AG +H+ V++ G + FGW N
Sbjct: 141 VWGENALGQLGLRKEQAGTQSPRHLQSLCGIPVAQISAGGNHSFVLSLSG--VVFGWGGN 198
Query: 138 KHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
GQLG G + P+ V L ++ + +CG + T L+ +G ++ G +GQLG
Sbjct: 199 SAGQLGLGDTTDRFVPTVVNSLKRKKIVSISCGGEHTAALA--KGGTVFTFGSGGFGQLG 256
Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHT-VAVDSKGYVYTWGF 255
H N + KD + PR +A L G + +V CG NHT V+ S +Y++G
Sbjct: 257 H---NSF--KD---------EHHPRLVAELWGSKVSQVTCGRNHTLVSTASPKLIYSFGC 302
Query: 256 GGYGRLGHREQKDEWVPRRVD 276
G G+LG+ EQ + VP VD
Sbjct: 303 GMQGQLGNGEQVKQSVPLPVD 323
Score = 223 (83.6 bits), Expect = 3.2e-15, P = 3.2e-15
Identities = 71/225 (31%), Positives = 100/225 (44%)
Query: 22 LLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
L G +G RK SP L+ L G+ + ++AG H + + G +
Sbjct: 139 LFVWGENALGQLGLRKE--QAGTQSPRHLQSLCGIPVAQISAG--GNHSFVLSLSGVVFG 194
Query: 82 WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
WG N GQLG GD R PT+V+ L + KI G HT + + G FG GQ
Sbjct: 195 WGGNSAGQLGLGDTTDRFVPTVVNSLKRKKIVSISCGGEHTAALAKGGTVFTFGSGGFGQ 254
Query: 142 LGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTD 200
LG S ++E P V L S+V+ CG + T+ +S+ I + G GQLG+G
Sbjct: 255 LGHNSFKDEHHPRLVAELWGSKVSQVTCGRNHTL-VSTASPKLIYSFGCGMQGQLGNGEQ 313
Query: 201 NEYNTKDSSVKLAYEAQPRPRAIAALAGE-TIVKVACGTNHTVAV 244
+ SV L + QP E TI K+ G NH+ A+
Sbjct: 314 VK-----QSVPLPVD-QP-----TEYNDEYTIQKLVAGENHSFAL 347
Score = 161 (61.7 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 47/190 (24%), Positives = 89/190 (46%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
PR + +L G + +++ G NH+ + G V+ WG G+LG + D +VP V+ +
Sbjct: 162 PRHLQSLCGIPVAQISAGGNHSFVLSLSGVVFGWGGNSAGQLGLGDTTDRFVPTVVNSLK 221
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWG-----KLKNNG-DDWMYPKPLMDLSGWNL 333
R ++ IS G +++ A GG ++ +G +L +N D +P+ + +L G +
Sbjct: 222 RKKIVS----ISCGGEHTAALAKGGTVFTFGSGGFGQLGHNSFKDEHHPRLVAELWGSKV 277
Query: 334 RCMDSGNMHHFVGADSSCI--SWGHAQYGELGYGPYGQKSSAMP--KKVDILEGMHVISV 389
+ G H V S + S+G G+LG G ++S +P + + + + +
Sbjct: 278 SQVTCGRNHTLVSTASPKLIYSFGCGMQGQLGNGEQVKQSVPLPVDQPTEYNDEYTIQKL 337
Query: 390 ACGYGHSLVI 399
G HS +
Sbjct: 338 VAGENHSFAL 347
>ZFIN|ZDB-GENE-070615-14 [details] [associations]
symbol:zgc:163136 "zgc:163136" species:7955 "Danio
rerio" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0006464
"cellular protein modification process" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 ZFIN:ZDB-GENE-070615-14 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00700000104312 EMBL:BX321880 IPI:IPI00852092
Ensembl:ENSDART00000113072 OMA:CELECKL Bgee:F1Q5I9 Uniprot:F1Q5I9
Length = 997
Score = 269 (99.8 bits), Expect = 1.2e-20, P = 1.2e-20
Identities = 73/231 (31%), Positives = 115/231 (49%)
Query: 48 TRLRPLVGVDIR-FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG-HGDKIQRDRPTIVS 105
T RPL G++ R + C H +A+ +G+ + WG N GQLG ++ P +
Sbjct: 105 TVCRPLKGLENRQVIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPQHLQ 164
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEV 163
L + + AG +H+ V++ G + FGW N GQLG G + P+ V+ L +
Sbjct: 165 SLCGIPVAQISAGGNHSFVLSLSG--VVFGWGSNSAGQLGLGDTTDRFIPTIVKSLSGKK 222
Query: 164 TAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
T + +CG + T LS +G ++ G +GQLGH + KD + PR
Sbjct: 223 TVSISCGGEHTATLS--KGGTVFTFGSGGFGQLGHNS-----LKD---------EHHPRL 266
Query: 223 IAALAGETIVKVACGTNHTVAV-DSKGYVYTWGFGGYGRLGHREQKDEWVP 272
+A L G + +V CG +HT+ DS +Y++G G G+LG+ EQ + VP
Sbjct: 267 VAELWGSKVSQVTCGRHHTLVFEDSSNQIYSFGCGMQGQLGNGEQVKQSVP 317
Score = 214 (80.4 bits), Expect = 3.4e-14, P = 3.4e-14
Identities = 69/225 (30%), Positives = 96/225 (42%)
Query: 22 LLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
L G +G RK SP L+ L G+ + ++AG H + + G +
Sbjct: 137 LFVWGENALGQLGLRKE--QAGTQSPQHLQSLCGIPVAQISAG--GNHSFVLSLSGVVFG 192
Query: 82 WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
WG N GQLG GD R PTIV LS K G HT +++ G FG GQ
Sbjct: 193 WGSNSAGQLGLGDTTDRFIPTIVKSLSGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQ 252
Query: 142 LGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTD 200
LG S+++E P V L S+V+ CG T+ I + G GQLG+G
Sbjct: 253 LGHNSLKDEHHPRLVAELWGSKVSQVTCGRHHTLVFEDSSN-QIYSFGCGMQGQLGNG-- 309
Query: 201 NEYNTKDSSVKLAYEAQPRPRAIAALAGE-TIVKVACGTNHTVAV 244
VK ++ P P + E T+ K+ G NH+ A+
Sbjct: 310 -------EQVK---QSVPLPVLLPTECTEFTMEKLIAGENHSFAL 344
Score = 174 (66.3 bits), Expect = 9.6e-10, P = 9.6e-10
Identities = 54/188 (28%), Positives = 87/188 (46%)
Query: 93 GDKIQRDRPTI---VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
G + D+ T+ + L ++ + G H++ +T DG +G N GQLG +
Sbjct: 96 GKVLVMDQSTVCRPLKGLENRQVIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQA 155
Query: 150 EIE-PSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD 207
+ P ++ L V + G + + LS + G + G GQLG G +T D
Sbjct: 156 GTQSPQHLQSLCGIPVAQISAGGNHSFVLS-LSGV-VFGWGSNSAGQLGLG-----DTTD 208
Query: 208 SSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQK 267
+ P + +L+G+ V ++CG HT + G V+T+G GG+G+LGH K
Sbjct: 209 RFI---------PTIVKSLSGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLK 259
Query: 268 DEWVPRRV 275
DE PR V
Sbjct: 260 DEHHPRLV 267
Score = 172 (65.6 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 54/192 (28%), Positives = 85/192 (44%)
Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHR-EQKDEWVPRRVDVFQ 279
R + L ++++ACG H++A+ + G ++ WG G+LG R EQ P+ +
Sbjct: 108 RPLKGLENRQVIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPQHLQSLC 167
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GD--DWMYPKPLMDLSGWNL 333
+ P A ISAG +S + G ++ WG GD D P + LSG
Sbjct: 168 --GI--PVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFIPTIVKSLSGKKT 223
Query: 334 RCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
+ G H + + ++G +G+LG+ K P+ V L G V V CG
Sbjct: 224 VSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSL--KDEHHPRLVAELWGSKVSQVTCG 281
Query: 393 YGHSLVIVDRTN 404
H+LV D +N
Sbjct: 282 RHHTLVFEDSSN 293
Score = 145 (56.1 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 42/164 (25%), Positives = 77/164 (46%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P+ + +L G + +++ G NH+ + G V+ WG G+LG + D ++P V
Sbjct: 160 PQHLQSLCGIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFIPTIVKSLS 219
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWG-----KLKNNG-DDWMYPKPLMDLSGWNL 333
+ IS G +++ + GG ++ +G +L +N D +P+ + +L G +
Sbjct: 220 GKKTVS----ISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAELWGSKV 275
Query: 334 RCMDSGNMHHFVGADSS--CISWGHAQYGELGYGPYGQKSSAMP 375
+ G H V DSS S+G G+LG G ++S +P
Sbjct: 276 SQVTCGRHHTLVFEDSSNQIYSFGCGMQGQLGNGEQVKQSVPLP 319
>ZFIN|ZDB-GENE-090311-16 [details] [associations]
symbol:si:ch211-281g13.4 "si:ch211-281g13.4"
species:7955 "Danio rerio" [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-090311-16 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
eggNOG:COG5021 HOGENOM:HOG000208452 HOVERGEN:HBG050878
GeneTree:ENSGT00700000104312 EMBL:BX321880 IPI:IPI00923765
RefSeq:NP_001139174.1 UniGene:Dr.150552 Ensembl:ENSDART00000138510
GeneID:794323 NextBio:20931808 Uniprot:B8A4S5
Length = 985
Score = 268 (99.4 bits), Expect = 1.6e-20, P = 1.6e-20
Identities = 74/231 (32%), Positives = 114/231 (49%)
Query: 48 TRLRPLVGVD-IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG-HGDKIQRDRPTIVS 105
T RPL G+D + + C H VA+ +G+ + WG N GQLG ++ P +
Sbjct: 107 TVCRPLKGLDNTKVIQIACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQALIQSPQHLQ 166
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEV 163
L + + AG +H+ V++ G + FGW N GQLG G + P+ V+ L +
Sbjct: 167 SLCGIPVAQISAGGNHSFVLSLSG--VVFGWGSNSAGQLGLGDTTDRFVPTIVKSLSGKK 224
Query: 164 TAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
T + +CG + T LS +G ++ G +GQLGH + KD + PR
Sbjct: 225 TVSISCGGEHTATLS--KGGTVFTFGSGGFGQLGHNS-----LKD---------EHHPRL 268
Query: 223 IAALAGETIVKVACGTNHT-VAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
+A L G + +V CG +HT V V +Y++G G G+LG+ EQ + VP
Sbjct: 269 VAELWGSKVSQVTCGRHHTLVLVALTNRIYSFGCGMQGQLGNGEQVKQSVP 319
Score = 213 (80.0 bits), Expect = 4.3e-14, P = 4.3e-14
Identities = 59/178 (33%), Positives = 82/178 (46%)
Query: 22 LLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
L G +G RK + SP L+ L G+ + ++AG H + + G +
Sbjct: 139 LFVWGENAHGQLGLRKE--QALIQSPQHLQSLCGIPVAQISAG--GNHSFVLSLSGVVFG 194
Query: 82 WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
WG N GQLG GD R PTIV LS K G HT +++ G FG GQ
Sbjct: 195 WGSNSAGQLGLGDTTDRFVPTIVKSLSGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQ 254
Query: 142 LGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
LG S+++E P V L S+V+ CG T+ L ++ I + G GQLG+G
Sbjct: 255 LGHNSLKDEHHPRLVAELWGSKVSQVTCGRHHTLVLVALTNR-IYSFGCGMQGQLGNG 311
Score = 194 (73.4 bits), Expect = 5.7e-12, P = 5.7e-12
Identities = 59/184 (32%), Positives = 87/184 (47%)
Query: 94 DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE- 152
DK RP + L K+ + G H+V ++ DG +G N HGQLG + I+
Sbjct: 104 DKYTVCRP--LKGLDNTKVIQIACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQALIQS 161
Query: 153 PSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVK 211
P ++ L V + G + + LS + G + G GQLG G +T D V
Sbjct: 162 PQHLQSLCGIPVAQISAGGNHSFVLS-LSGV-VFGWGSNSAGQLGLG-----DTTDRFV- 213
Query: 212 LAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV 271
P + +L+G+ V ++CG HT + G V+T+G GG+G+LGH KDE
Sbjct: 214 --------PTIVKSLSGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHH 265
Query: 272 PRRV 275
PR V
Sbjct: 266 PRLV 269
Score = 178 (67.7 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 59/214 (27%), Positives = 93/214 (43%)
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
G D D L + R + L ++++ACG H+VA+ + G ++ WG
Sbjct: 87 GEDGAVLLADGGKVLLMDKYTVCRPLKGLDNTKVIQIACGDQHSVALSNDGQLFVWGENA 146
Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN-- 315
+G+LG R K++ + + Q +P A ISAG +S + G ++ WG
Sbjct: 147 HGQLGLR--KEQALIQSPQHLQSLCGIPV-AQISAGGNHSFVLSLSGVVFGWGSNSAGQL 203
Query: 316 --GD--DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQK 370
GD D P + LSG + G H + + ++G +G+LG+ K
Sbjct: 204 GLGDTTDRFVPTIVKSLSGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSL--K 261
Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIVDRTN 404
P+ V L G V V CG H+LV+V TN
Sbjct: 262 DEHHPRLVAELWGSKVSQVTCGRHHTLVLVALTN 295
Score = 146 (56.5 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 40/129 (31%), Positives = 60/129 (46%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
PT ++ L G + V+ C H + G +T+G GQLGH P +V+E
Sbjct: 214 PTIVKSLSGK--KTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAE 271
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA 165
L K+ + GR HT+V+ N + +FG GQLG+G + P PV +
Sbjct: 272 LWGSKVSQVTCGRHHTLVLVALTNRIYSFGCGMQGQLGNGEQVKQSVPLPV------LLP 325
Query: 166 TACGADFTV 174
T C +FT+
Sbjct: 326 TDCNCEFTM 334
Score = 135 (52.6 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 41/165 (24%), Positives = 76/165 (46%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P+ + +L G + +++ G NH+ + G V+ WG G+LG + D +VP V
Sbjct: 162 PQHLQSLCGIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFVPTIVKSLS 221
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWG-----KLKNNG-DDWMYPKPLMDLSGWNL 333
+ IS G +++ + GG ++ +G +L +N D +P+ + +L G +
Sbjct: 222 GKKTVS----ISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAELWGSKV 277
Query: 334 RCMDSGNMHH---FVGADSSCISWGHAQYGELGYGPYGQKSSAMP 375
+ G HH V + S+G G+LG G ++S +P
Sbjct: 278 SQVTCGR-HHTLVLVALTNRIYSFGCGMQGQLGNGEQVKQSVPLP 321
>TAIR|locus:504956339 [details] [associations]
symbol:RUG1 "AT5G08710" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
EMBL:BT005498 EMBL:AK118882 IPI:IPI00533904 RefSeq:NP_680156.2
UniGene:At.45869 ProteinModelPortal:Q8GWF2 SMR:Q8GWF2 PRIDE:Q8GWF2
EnsemblPlants:AT5G08710.1 GeneID:830771 KEGG:ath:AT5G08710
TAIR:At5g08710 HOGENOM:HOG000006005 InParanoid:Q8GWF2 OMA:HSACIDE
PhylomeDB:Q8GWF2 ProtClustDB:CLSN2690903 Genevestigator:Q8GWF2
Uniprot:Q8GWF2
Length = 434
Score = 260 (96.6 bits), Expect = 2.0e-20, P = 2.0e-20
Identities = 92/371 (24%), Positives = 156/371 (42%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKA 115
D A C H + + R + G N+ GQLG D K P VS L K I
Sbjct: 81 DHSITAVACGGAHTLFLTETRRVFATGLNDCGQLGVSDVKSHAMDPLEVSGLDK-DILHI 139
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE--PSPVRCLVS-EVTATACGADF 172
AG H+ +T DG +G N GQLG G + P+ V L + + A G++
Sbjct: 140 SAGYYHSAAITVDGELYMWGKNSSGQLGLGKKAARVVRVPTKVEALHGITIQSVALGSEH 199
Query: 173 TVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIV 232
+V ++ +G +L+ G G+LGHG + + + L ++ PR I L G +
Sbjct: 200 SVAVT--DGGEVLSWGGGGSGRLGHG----HQSSLFGI-LRSNSEFTPRLIKELEGIKVT 252
Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISA 292
VA G H+ D G + +G ++G ++ P + + +P ++
Sbjct: 253 NVAAGLLHSACTDENGSAFMFGEKSINKMGFGGVRNATTPSII------SEVPYAEEVAC 306
Query: 293 GSVNSSCTAGGGQLYMWGKLKNN--GDDWMYPK--------PLMDLSGWNLRCMDSGNMH 342
G ++ GG+LY WG +N G D Y P ++ + + C G H
Sbjct: 307 GGYHTCVVTRGGELYTWGSNENGCLGTDSTYVSHSPVRVEGPFLESTVSQVSC---GWKH 363
Query: 343 HFVGADSSCISWG------------HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVA 390
+D++ +WG H+ G+LG+G A P VD+ + + + ++
Sbjct: 364 TAAISDNNVFTWGWGGSHGTFSVDGHSSGGQLGHG--SDVDYARPAMVDLGKNVRAVHIS 421
Query: 391 CGYGHSLVIVD 401
CG+ H+ +++
Sbjct: 422 CGFNHTAAVLE 432
Score = 253 (94.1 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 97/338 (28%), Positives = 147/338 (43%)
Query: 82 WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
WG + G+LG G+ + P + S LS + I G +HT+ +TE A G N GQ
Sbjct: 54 WGSGDYGRLGLGNLDSQWTPAVCSALSDHSITAVACGGAHTLFLTETRRVFATGLNDCGQ 113
Query: 142 LGSGSIRNE-IEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTD 200
LG +++ ++P V L ++ + G + ++ V+G + G GQLG G
Sbjct: 114 LGVSDVKSHAMDPLEVSGLDKDILHISAGYYHSAAIT-VDG-ELYMWGKNSSGQLGLG-- 169
Query: 201 NEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGR 260
K A P + AL G TI VA G+ H+VAV G V +WG GG GR
Sbjct: 170 ----------KKAARVVRVPTKVEALHGITIQSVALGSEHSVAVTDGGEVLSWGGGGSGR 219
Query: 261 LGHREQKDEW-VPRRVDVFQRNNVLPPEAV----ISAGSVNSSCTAGGGQLYMWGKLKNN 315
LGH Q + + R F + E + ++AG ++S+CT G +M+G+ N
Sbjct: 220 LGHGHQSSLFGILRSNSEFTPRLIKELEGIKVTNVAAGLLHSACTDENGSAFMFGEKSIN 279
Query: 316 ----GD--DWMYPKPLMDLS-GWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPY 367
G + P + ++ + C G H V +WG + G LG
Sbjct: 280 KMGFGGVRNATTPSIISEVPYAEEVAC---GGYHTCVVTRGGELYTWGSNENGCLGTDST 336
Query: 368 GQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
S + + LE V V+CG+ H+ I D NV
Sbjct: 337 YVSHSPVRVEGPFLEST-VSQVSCGWKHTAAISDN-NV 372
Score = 225 (84.3 bits), Expect = 3.6e-16, P = 3.6e-16
Identities = 79/255 (30%), Positives = 113/255 (44%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDK-----IQRDR- 100
PT++ L G+ I+ VA G S H VAV G +WG G+LGHG + I R
Sbjct: 179 PTKVEALHGITIQSVALG--SEHSVAVTDGGEVLSWGGGGSGRLGHGHQSSLFGILRSNS 236
Query: 101 ---PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
P ++ EL K+ AG H+ E+G++ FG ++G G +RN PS
Sbjct: 237 EFTPRLIKELEGIKVTNVAAGLLHSACTDENGSAFMFGEKSINKMGFGGVRNATTPS--- 293
Query: 158 CLVSEVT---ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
++SEV ACG T ++ G + G + G LG TD+ Y S V++
Sbjct: 294 -IISEVPYAEEVACGGYHTCVVT--RGGELYTWGSNENGCLG--TDSTY-VSHSPVRVE- 346
Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY------------GRLG 262
T+ +V+CG HT A+ S V+TWG+GG G+LG
Sbjct: 347 ---------GPFLESTVSQVSCGWKHTAAI-SDNNVFTWGWGGSHGTFSVDGHSSGGQLG 396
Query: 263 HREQKDEWVPRRVDV 277
H D P VD+
Sbjct: 397 HGSDVDYARPAMVDL 411
Score = 172 (65.6 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 68/221 (30%), Positives = 97/221 (43%)
Query: 38 GALDGNL-VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
G L N +P ++ L G+ + VAAG + H D G + +G ++G G
Sbjct: 230 GILRSNSEFTPRLIKELEGIKVTNVAAGLL--HSACTDENGSAFMFGEKSINKMGFGGVR 287
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
P+I+SE+ Y ++ G HT VVT G +G N++G LG+ S + SPV
Sbjct: 288 NATTPSIISEVP-YA-EEVACGGYHTCVVTRGGELYTWGSNENGCLGTDS--TYVSHSPV 343
Query: 157 RC----LVSEVTATACGADFTVWLSSVE------GAS---ILNAGLPQYGQLGHGTDNEY 203
R L S V+ +CG T +S G S G GQLGHG+D +Y
Sbjct: 344 RVEGPFLESTVSQVSCGWKHTAAISDNNVFTWGWGGSHGTFSVDGHSSGGQLGHGSDVDY 403
Query: 204 NTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV 244
+ + V L RA V ++CG NHT AV
Sbjct: 404 -ARPAMVDLGKNV----RA---------VHISCGFNHTAAV 430
Score = 128 (50.1 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 40/174 (22%), Positives = 71/174 (40%)
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
C + + K + WG G YGRLG +W P +++ ++ G
Sbjct: 37 CCSRWVSSESGKRFAAMWGSGDYGRLGLGNLDSQWTPAVCSALSDHSI----TAVACGGA 92
Query: 296 NSSCTAGGGQLYMWGKLKNNG-----DDWMYPKPLMDLSGWNLRCMD-SGNMHHF--VGA 347
++ +++ G L + G D + +++SG + + S +H +
Sbjct: 93 HTLFLTETRRVFATG-LNDCGQLGVSDVKSHAMDPLEVSGLDKDILHISAGYYHSAAITV 151
Query: 348 DSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
D WG G+LG G + +P KV+ L G+ + SVA G HS+ + D
Sbjct: 152 DGELYMWGKNSSGQLGLGKKAARVVRVPTKVEALHGITIQSVALGSEHSVAVTD 205
>ZFIN|ZDB-GENE-061220-11 [details] [associations]
symbol:sergef "secretion regulating guanine
nucleotide exchange factor" species:7955 "Danio rerio" [GO:0050709
"negative regulation of protein secretion" evidence=IEA]
InterPro:IPR027048 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-061220-11 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 HOGENOM:HOG000154414 HOVERGEN:HBG051746
OrthoDB:EOG4J1183 PANTHER:PTHR22870:SF7 EMBL:BC124691
IPI:IPI00490832 UniGene:Dr.91496 InParanoid:Q08BJ6 Uniprot:Q08BJ6
Length = 423
Score = 258 (95.9 bits), Expect = 3.2e-20, P = 3.2e-20
Identities = 99/344 (28%), Positives = 150/344 (43%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIV-SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
YTWG N GQLG G+ + P V S L + +I+ G H+ ++++ G L G N
Sbjct: 40 YTWGANSYGQLGQGNAEDQAEPRRVESGLQEEQIRAVTGGGGHSALISDSGELLVCGQNH 99
Query: 139 HGQLGSGSIRN--EIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
GQLG G + P+ V +CG DFT+ L+ +G +L G +GQLG
Sbjct: 100 KGQLGLGHTLEIMTFQTCPLPGF-GRVQQVSCGWDFTIILTG-DGL-VLACGSNAFGQLG 156
Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
+ ++ + +K +E P + VA G H +A + G VY WG G
Sbjct: 157 VSAEKTHSAEPLLLKSFHE----P----------VTSVAAGLRHALASTASGCVYQWGTG 202
Query: 257 GYGRLGHREQKDEWVPRRVDVFQRNNV-----LPPEAVISAGSVNSSCTAGGGQLYMWGK 311
R + VP + + V + + VI AGS + +C G+L++WG
Sbjct: 203 -LSSHAKRMLNPQPVPSHLSSKEPCLVPGFAHVTTQKVI-AGSAHCACLTVNGELFLWGS 260
Query: 312 LKNN---GDDWMYPKPL-MDLSGW-NLRCMD--SGNMHHFVGADSSCI-SWGHAQYGELG 363
K+ P P+ +D S + R D SG H +S + +WG + YG+LG
Sbjct: 261 NKHGQLISGSLFLPLPVALDRSMLQDERVSDVHSGWTHLVAQTESGRVFTWGRSNYGQLG 320
Query: 364 YGPYG-QKSSA------MPKKVDILEGMHVISVACGYGHSLVIV 400
+ +K S P +V L G IS CG H+L +V
Sbjct: 321 QTNHSMEKQSCDEHLVRSPVEVKALFGATQIS--CGSEHNLAVV 362
Score = 184 (69.8 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 67/264 (25%), Positives = 112/264 (42%)
Query: 22 LLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
+L CGS + +G A + P L+ + VAAG H +A G Y
Sbjct: 144 VLACGSNAFGQLG--VSAEKTHSAEPLLLKSF-HEPVTSVAAGLR--HALASTASGCVYQ 198
Query: 82 WGRNERGQLGHGDKIQRDRPT----------IVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
WG G H ++ +P +V + +K AG +H +T +G
Sbjct: 199 WGT---GLSSHAKRMLNPQPVPSHLSSKEPCLVPGFAHVTTQKVIAGSAHCACLTVNGEL 255
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
+G NKHGQL SGS+ + + R ++ + + + +T ++ E + G
Sbjct: 256 FLWGSNKHGQLISGSLFLPLPVALDRSMLQDERVSDVHSGWTHLVAQTESGRVFTWGRSN 315
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
YGQLG T++ + L P + AL G T +++CG+ H +AV G V+
Sbjct: 316 YGQLGQ-TNHSMEKQSCDEHLVRS----PVEVKALFGAT--QISCGSEHNLAVVG-GRVF 367
Query: 252 TWGFGGYGRLGHREQKDEWVPRRV 275
+WG+ +G G +D P+ +
Sbjct: 368 SWGWNEHGMCGDGSLQDITQPQPI 391
Score = 178 (67.7 bits), Expect = 8.3e-11, P = 8.3e-11
Identities = 80/359 (22%), Positives = 142/359 (39%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKY-KIKKAG 116
IR V G H + G G+N +GQLG G ++ L + ++++
Sbjct: 73 IRAVTGG--GGHSALISDSGELLVCGQNHKGQLGLGHTLEI-MTFQTCPLPGFGRVQQVS 129
Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSPVRCLVSEVTATACGADFTVW 175
G T+++T DG LA G N GQLG S + EP ++ VT+ A G +
Sbjct: 130 CGWDFTIILTGDGLVLACGSNAFGQLGVSAEKTHSAEPLLLKSFHEPVTSVAAGLRHAL- 188
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
AS + + Q+G G + + V ++ + P + A T KV
Sbjct: 189 ------ASTASGCVYQWGT-GLSSHAKRMLNPQPVP-SHLSSKEPCLVPGFAHVTTQKVI 240
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAG 293
G+ H + G ++ WG +G+L ++P V R+ +L E V + +G
Sbjct: 241 AGSAHCACLTVNGELFLWGSNKHGQL---ISGSLFLPLPV-ALDRS-MLQDERVSDVHSG 295
Query: 294 SVNSSCTAGGGQLYMWGKL-------------KNNGDDWMYPKPLMDLSGWNLRCMDSGN 340
+ G+++ WG+ K + D+ + P+ + + + G+
Sbjct: 296 WTHLVAQTESGRVFTWGRSNYGQLGQTNHSMEKQSCDEHLVRSPVEVKALFGATQISCGS 355
Query: 341 MHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
H+ SWG ++G G G + P+ + L + + CG GHS+ +
Sbjct: 356 EHNLAVVGGRVFSWGWNEHGMCGDGSL--QDITQPQPIPALADAVALLIGCGAGHSMAL 412
Score = 157 (60.3 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 47/156 (30%), Positives = 73/156 (46%)
Query: 42 GNLVSPTRLRPL-VGVDIRFVAAGCVS------CHCVAVDVEGRCYTWGRNERGQLG--- 91
G L+S + PL V +D + VS H VA GR +TWGR+ GQLG
Sbjct: 264 GQLISGSLFLPLPVALDRSMLQDERVSDVHSGWTHLVAQTESGRVFTWGRSNYGQLGQTN 323
Query: 92 HG-DKIQRDRPTIVSEL---SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI 147
H +K D + S + + + + G H + V G ++GWN+HG G GS+
Sbjct: 324 HSMEKQSCDEHLVRSPVEVKALFGATQISCGSEHNLAVV-GGRVFSWGWNEHGMCGDGSL 382
Query: 148 RNEIEPSPVRCLVSEVTAT-ACGADFTVWLSSVEGA 182
++ +P P+ L V CGA ++ L S++ +
Sbjct: 383 QDITQPQPIPALADAVALLIGCGAGHSMALCSLKSS 418
Score = 153 (58.9 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 50/188 (26%), Positives = 81/188 (43%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV--SELSKYKIKKAGAG 118
V AG S HC + V G + WG N+ GQL G + P + S L ++ +G
Sbjct: 239 VIAG--SAHCACLTVNGELFLWGSNKHGQLISGS-LFLPLPVALDRSMLQDERVSDVHSG 295
Query: 119 RSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSS 178
+H V TE G +G + +GQLG + E + + S V A + S
Sbjct: 296 WTHLVAQTESGRVFTWGRSNYGQLGQTNHSMEKQSCDEHLVRSPVEVKALFGATQISCGS 355
Query: 179 VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGT 238
+++ + +G HG + + +D + QP+P I ALA + + CG
Sbjct: 356 EHNLAVVGGRVFSWGWNEHGMCGDGSLQDIT-------QPQP--IPALADAVALLIGCGA 406
Query: 239 NHTVAVDS 246
H++A+ S
Sbjct: 407 GHSMALCS 414
>TAIR|locus:2092190 [details] [associations]
symbol:AT3G26100 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002686
EMBL:AB023041 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 HSSP:P18754
EMBL:AK230272 IPI:IPI00540426 RefSeq:NP_974362.1 UniGene:At.25510
UniGene:At.69016 ProteinModelPortal:Q9LU80 SMR:Q9LU80 STRING:Q9LU80
PRIDE:Q9LU80 EnsemblPlants:AT3G26100.2 GeneID:822208
KEGG:ath:AT3G26100 TAIR:At3g26100 HOGENOM:HOG000070923
InParanoid:Q9LU80 OMA:LACQPNG PhylomeDB:Q9LU80
ProtClustDB:CLSN2688790 Genevestigator:Q9LU80 Uniprot:Q9LU80
Length = 532
Score = 260 (96.6 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 90/305 (29%), Positives = 140/305 (45%)
Query: 114 KAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADF 172
+A AG H+V VT G FG+N GQLG G +E PVR L + A GA
Sbjct: 147 QAVAGPGHSVAVTSKGEVYTFGYNNSGQLGHGHTEDEARIQPVRSLQGVRIIQAAAGAAR 206
Query: 173 TVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIV 232
T+ +S +G + G +G+ +G TK + P+ + +L +V
Sbjct: 207 TMLISD-DG-KVYACGKESFGEAEYGGQG---TKPVTT---------PQLVTSLKNIFVV 252
Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISA 292
+ A G T + +G VYT+ +G GRLGH+ + + PR + + NV P I+A
Sbjct: 253 QAAIGNYFTAVLSREGKVYTFSWGNDGRLGHQTEAADVEPRPL-LGPLENV--PVVQIAA 309
Query: 293 GS---VNSSCTAGGGQLY-----MWGKLKNNG-DDWMYPKPLMDLSGWNL--RCMDSGNM 341
G + +C G +Y + GKL + D YP+ + NL R + +G
Sbjct: 310 GYCYLLALACQPNGMSVYSVGCGLGGKLGHGSRTDEKYPRVIEQFQILNLQPRVVAAGAW 369
Query: 342 HH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
H VG D +WG +YG LG+G ++ ++PK V+ L + + VA G + V+
Sbjct: 370 HAAVVGQDGRVCTWGWGRYGCLGHG--NEECESVPKVVEGLSHVKAVHVATGDYTTFVVS 427
Query: 401 DRTNV 405
D +V
Sbjct: 428 DDGDV 432
Score = 247 (92.0 bits), Expect = 4.4e-20, Sum P(2) = 4.4e-20
Identities = 92/311 (29%), Positives = 144/311 (46%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H VAV +G YT+G N GQLGHG R V L +I +A AG + T+++++D
Sbjct: 154 HSVAVTSKGEVYTFGYNNSGQLGHGHTEDEARIQPVRSLQGVRIIQAAAGAARTMLISDD 213
Query: 129 GNSLAFGWNKHGQL--GSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASIL 185
G A G G+ G + P V L + V A G FT LS EG +
Sbjct: 214 GKVYACGKESFGEAEYGGQGTKPVTTPQLVTSLKNIFVVQAAIGNYFTAVLSR-EG-KVY 271
Query: 186 NAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV- 244
G+LGH T+ A + +PRP + L +V++A G + +A+
Sbjct: 272 TFSWGNDGRLGHQTE------------AADVEPRP-LLGPLENVPVVQIAAGYCYLLALA 318
Query: 245 -DSKGY-VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAG 302
G VY+ G G G+LGH + DE PR ++ FQ N+ P V++AG+ +++
Sbjct: 319 CQPNGMSVYSVGCGLGGKLGHGSRTDEKYPRVIEQFQILNLQP--RVVAAGAWHAAVVGQ 376
Query: 303 GGQLYMWGKLK----NNGDDWM--YPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWG 355
G++ WG + +G++ PK + LS + +G+ FV +D + S+G
Sbjct: 377 DGRVCTWGWGRYGCLGHGNEECESVPKVVEGLSHVKAVHVATGDYTTFVVSDDGDVYSFG 436
Query: 356 HAQYGELGYGP 366
+ LG+ P
Sbjct: 437 CGESASLGHHP 447
Score = 205 (77.2 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 76/266 (28%), Positives = 120/266 (45%)
Query: 30 WDAVGRRKGALDGNLVSPTRLR-PLVGVDIRFVAAGCVSCHCVAVDVEGRC-YTWGRNER 87
W GR + V P L PL V + +AAG +A G Y+ G
Sbjct: 275 WGNDGRLGHQTEAADVEPRPLLGPLENVPVVQIAAGYCYLLALACQPNGMSVYSVGCGLG 334
Query: 88 GQLGHGDKIQRDRPTIVSELSKYKIKK--AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG 145
G+LGHG + P ++ + ++ AG H VV +DG +GW ++G LG G
Sbjct: 335 GKLGHGSRTDEKYPRVIEQFQILNLQPRVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 394
Query: 146 SIRNEIEPSPVRCLVSEVTAT--ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTD-NE 202
+ E P V L S V A A G D+T ++ S +G + + G + LGH +E
Sbjct: 395 NEECESVPKVVEGL-SHVKAVHVATG-DYTTFVVSDDG-DVYSFGCGESASLGHHPSFDE 451
Query: 203 YNTKDSSVKLAYEAQPRPRAIAAL--AGETIVKVACGTN------HTVAVDSKGYVYTWG 254
+ ++V L+ P + +L E +V+++ TN HT A+ G ++ +G
Sbjct: 452 QGNRHANV-LS------PTVVTSLKQVNERMVQISL-TNSIYWNAHTFALTESGKLFAFG 503
Query: 255 FGGYGRLGH---REQKDEWVPRRVDV 277
G G+LG + QK+ VP +VD+
Sbjct: 504 AGDQGQLGTELGKNQKERCVPEKVDI 529
Score = 156 (60.0 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 69/247 (27%), Positives = 99/247 (40%)
Query: 60 FVAAGCVSCHCVAV-DVEGRCYTWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGA 117
FV + + AV EG+ YT+ G+LGH + P ++ L + + A
Sbjct: 250 FVVQAAIGNYFTAVLSREGKVYTFSWGNDGRLGHQTEAADVEPRPLLGPLENVPVVQIAA 309
Query: 118 GRSHTVVVTEDGNSLAF---GWNKHGQLGSGSIRNEIEPSPV---RCLVSEVTATACGAD 171
G + + + N ++ G G+LG GS +E P + + L + A GA
Sbjct: 310 GYCYLLALACQPNGMSVYSVGCGLGGKLGHGSRTDEKYPRVIEQFQILNLQPRVVAAGA- 368
Query: 172 FTVWLSSVEGAS--ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
W ++V G + G +YG LGHG NE E + P+ + L+
Sbjct: 369 ---WHAAVVGQDGRVCTWGWGRYGCLGHG--NE------------ECESVPKVVEGLSHV 411
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
V VA G T V G VY++G G LGH DE R NVL P V
Sbjct: 412 KAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHHPSFDEQGNRHA------NVLSPTVV 465
Query: 290 ISAGSVN 296
S VN
Sbjct: 466 TSLKQVN 472
Score = 53 (23.7 bits), Expect = 4.4e-20, Sum P(2) = 4.4e-20
Identities = 16/44 (36%), Positives = 23/44 (52%)
Query: 340 NMHHFVGADSSCI-SWGHAQYGELG--YGPYGQKSSAMPKKVDI 380
N H F +S + ++G G+LG G QK +P+KVDI
Sbjct: 487 NAHTFALTESGKLFAFGAGDQGQLGTELGK-NQKERCVPEKVDI 529
>TAIR|locus:2086253 [details] [associations]
symbol:AT3G23270 "AT3G23270" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008536 "Ran GTPase binding" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007165 "signal
transduction" evidence=ISS] [GO:0035091 "phosphatidylinositol
binding" evidence=ISS] [GO:0009827 "plant-type cell wall
modification" evidence=RCA] [GO:0009860 "pollen tube growth"
evidence=RCA] InterPro:IPR000306 InterPro:IPR001849
InterPro:IPR024774 Pfam:PF01363 Pfam:PF12814 PROSITE:PS50003
SMART:SM00064 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005938 EMBL:CP002686 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS50012
GO:GO:0032065 InterPro:IPR013591 Pfam:PF08381 PROSITE:PS51514
IPI:IPI00516271 RefSeq:NP_188968.1 UniGene:At.53452
ProteinModelPortal:F4J2Y2 SMR:F4J2Y2 PRIDE:F4J2Y2
EnsemblPlants:AT3G23270.1 GeneID:821906 KEGG:ath:AT3G23270
OMA:PKFRAFR ArrayExpress:F4J2Y2 Uniprot:F4J2Y2
Length = 1045
Score = 264 (98.0 bits), Expect = 5.6e-20, P = 5.6e-20
Identities = 103/370 (27%), Positives = 162/370 (43%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
++++P L V +D+ + G H V +G +TWG G+LGHG ++ RP
Sbjct: 238 DVLTPRPLESNVVLDVHQIVCGVR--HVALVTRQGEVFTWGEEVGGRLGHGIQVDISRPK 295
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPSPVRCLV 160
+V L+ I G HT VV+ G+ ++G H G LG GS + P V +
Sbjct: 296 LVEFLALTNIDFVACGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPL 355
Query: 161 S--EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP 218
+V + ACG + L++ G + G +G LGHG ++S ++Y
Sbjct: 356 EGLQVLSVACGTWHSA-LATANG-KLFTFGDGAFGVLGHGN------RES---VSY---- 400
Query: 219 RPRAIAALAGETIVKVACGTNHTVA-VDSKGY---------VYTWGFGGYGRLGHREQKD 268
P+ + +L G VKVAC HT A V+ G ++TWG G RLGH ++
Sbjct: 401 -PKEVQSLNGLKTVKVACSIWHTAAIVEVMGQTATSMSSRKLFTWGDGDKNRLGHGNKET 459
Query: 269 EWVPRRVDV---FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPL 325
+P V + + + A + + GG + G+L N+ D P +
Sbjct: 460 YLLPTCVSSLIDYNFHKIACGHTFTVALTTSGHVFTMGGTAH--GQLGNSISDGKLPCLV 517
Query: 326 MD-LSGWNLRCMDSGNMHHF--VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILE 382
D L G + + G HH + + S +WG G LG+G K + P V+ L
Sbjct: 518 QDRLVGEFVEEIACG-AHHVAVLTSRSEVFTWGKGANGRLGHGDTEDKRT--PTLVEALR 574
Query: 383 GMHVISVACG 392
HV S++CG
Sbjct: 575 DRHVKSLSCG 584
Score = 203 (76.5 bits), Expect = 6.1e-13, P = 6.1e-13
Identities = 92/353 (26%), Positives = 144/353 (40%)
Query: 30 W-DAVGRRKG-ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGR--N 85
W + VG R G + ++ P + L +I FVA G H V G ++WG +
Sbjct: 275 WGEEVGGRLGHGIQVDISRPKLVEFLALTNIDFVACG--EYHTCVVSTSGDLFSWGDGIH 332
Query: 86 ERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGS 144
G LGHG I P VS L ++ G H+ + T +G FG G LG
Sbjct: 333 NVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACGTWHSALATANGKLFTFGDGAFGVLGH 392
Query: 145 GSIRNEIEPSPVRCLVSEVTA-TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEY 203
G+ + P V+ L T AC T + V G + + + G G N
Sbjct: 393 GNRESVSYPKEVQSLNGLKTVKVACSIWHTAAIVEVMGQTATSMSSRKLFTWGDGDKNRL 452
Query: 204 NTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
+ L P +++L K+ACG TVA+ + G+V+T G +G+LG+
Sbjct: 453 GHGNKETYLL------PTCVSSLIDYNFHKIACGHTFTVALTTSGHVFTMGGTAHGQLGN 506
Query: 264 REQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGKLKN----NGD 317
D +P V + L E V I+ G+ + + +++ WGK N +GD
Sbjct: 507 -SISDGKLPCLVQ-----DRLVGEFVEEIACGAHHVAVLTSRSEVFTWGKGANGRLGHGD 560
Query: 318 --DWMYPKPLMDLSGWNLRCMDSGN-------MHHFV-GADSSCISWGHAQYG 360
D P + L +++ + G+ +H +V GAD S S +G
Sbjct: 561 TEDKRTPTLVEALRDRHVKSLSCGSNFTSSICIHKWVSGADQSICSGCRQAFG 613
Score = 195 (73.7 bits), Expect = 4.8e-12, P = 4.8e-12
Identities = 54/193 (27%), Positives = 89/193 (46%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
PR + + + ++ CG H V +G V+TWG GRLGH Q D P+ V+
Sbjct: 242 PRPLESNVVLDVHQIVCGVRHVALVTRQGEVFTWGEEVGGRLGHGIQVDISRPKLVEFLA 301
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------LKNNGDD---WMYPKPLMD-LS 329
N+ ++ G ++ + G L+ WG L +G D W+ PK + L
Sbjct: 302 LTNI----DFVACGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWI-PKRVSGPLE 356
Query: 330 GWNLRCMDSGNMHHFVG-ADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVIS 388
G + + G H + A+ ++G +G LG+G ++S + PK+V L G+ +
Sbjct: 357 GLQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHG--NRESVSYPKEVQSLNGLKTVK 414
Query: 389 VACGYGHSLVIVD 401
VAC H+ IV+
Sbjct: 415 VACSIWHTAAIVE 427
>TAIR|locus:2099986 [details] [associations]
symbol:AT3G55580 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] INTERPRO:IPR000408 Pfam:PF00415
EMBL:CP002686 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:AL132975
HSSP:P18754 IPI:IPI00521720 PIR:T47697 RefSeq:NP_191117.1
UniGene:At.35013 ProteinModelPortal:Q9M2S1 SMR:Q9M2S1 PRIDE:Q9M2S1
EnsemblPlants:AT3G55580.1 GeneID:824723 KEGG:ath:AT3G55580
TAIR:At3g55580 InParanoid:Q9M2S1 OMA:HPIPCIE PhylomeDB:Q9M2S1
ProtClustDB:CLSN2685056 Genevestigator:Q9M2S1 Uniprot:Q9M2S1
Length = 488
Score = 220 (82.5 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 79/258 (30%), Positives = 113/258 (43%)
Query: 55 GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ---RDRPTIVSELSKYK 111
GV I VAAG H +A+ G+ + WG GQLG G +++ P E S Y
Sbjct: 233 GVRIVSVAAG--GRHTLALSDIGQVWGWGYGGEGQLGLGSRVRLVSSPHPIPCIEPSSYG 290
Query: 112 ----------------------IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
+KK G H+ V+T+ G L FGW +GQ G GS +
Sbjct: 291 KATSSGVNMSSVVQCGRVLGSYVKKIACGGRHSAVITDTGALLTFGWGLYGQCGQGSTDD 350
Query: 150 EIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
E+ P+ V L+ + A G T SS +G + G Q+GQLG G D
Sbjct: 351 ELSPTCVSSLLGIRIEEVAAGLWHTTCASS-DG-DVYAFGGNQFGQLGTGCD-------- 400
Query: 209 SVKLAYEAQPRPRAIAALAGETI-VK-VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQ 266
+A+ P+ + A E + VK ++CG HT + +G V+ WG+ YG+LG +
Sbjct: 401 ------QAETLPKLLEAPNLENVNVKTISCGARHTAVITDEGRVFCWGWNKYGQLGIGDV 454
Query: 267 KDEWVPRRV---DVFQRN 281
D P V D F +N
Sbjct: 455 IDRNAPAEVRIKDCFPKN 472
Score = 199 (75.1 bits), Expect = 4.8e-13, P = 4.8e-13
Identities = 50/143 (34%), Positives = 70/143 (48%)
Query: 30 WDAVGR-RKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERG 88
W G+ +G+ D L SPT + L+G+ I VAAG C + D G Y +G N+ G
Sbjct: 337 WGLYGQCGQGSTDDEL-SPTCVSSLLGIRIEEVAAGLWHTTCASSD--GDVYAFGGNQFG 393
Query: 89 QLGHGDKIQRDRPTIVS--ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS 146
QLG G P ++ L +K G HT V+T++G +GWNK+GQLG G
Sbjct: 394 QLGTGCDQAETLPKLLEAPNLENVNVKTISCGARHTAVITDEGRVFCWGWNKYGQLGIGD 453
Query: 147 IRNEIEPSPVRCLVSEVTATACG 169
+ + P+ VR ACG
Sbjct: 454 VIDRNAPAEVRIKDCFPKNIACG 476
Score = 168 (64.2 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 54/174 (31%), Positives = 78/174 (44%)
Query: 29 CWDAVGRRKGALDG-NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNER 87
C + K G N+ S + ++G ++ +A G H + G T+G
Sbjct: 283 CIEPSSYGKATSSGVNMSSVVQCGRVLGSYVKKIACG--GRHSAVITDTGALLTFGWGLY 340
Query: 88 GQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI 147
GQ G G PT VS L +I++ AG HT + DG+ AFG N+ GQLG+G
Sbjct: 341 GQCGQGSTDDELSPTCVSSLLGIRIEEVAAGLWHTTCASSDGDVYAFGGNQFGQLGTGCD 400
Query: 148 RNEIEPSPVRCLVSE---VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
+ E P + E V +CGA T ++ EG + G +YGQLG G
Sbjct: 401 QAETLPKLLEAPNLENVNVKTISCGARHTAVITD-EGR-VFCWGWNKYGQLGIG 452
Score = 162 (62.1 bits), Expect = 6.2e-20, Sum P(2) = 6.2e-20
Identities = 51/181 (28%), Positives = 86/181 (47%)
Query: 228 GETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE 287
G + K+ACG H+ + G + T+G+G YG+ G DE P V + E
Sbjct: 310 GSYVKKIACGGRHSAVITDTGALLTFGWGLYGQCGQGSTDDELSPTCVSSLLGIRI---E 366
Query: 288 AVISAGSVNSSCTAGGGQLY-----MWGKLKNNGDDW-MYPKPLM--DLSGWNLRCMDSG 339
V +AG +++C + G +Y +G+L D PK L +L N++ + G
Sbjct: 367 EV-AAGLWHTTCASSDGDVYAFGGNQFGQLGTGCDQAETLPKLLEAPNLENVNVKTISCG 425
Query: 340 NMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLV 398
H V D + WG +YG+LG G +++ P +V I + ++ACG+ H+L+
Sbjct: 426 ARHTAVITDEGRVFCWGWNKYGQLGIGDVIDRNA--PAEVRIKDCFPK-NIACGWWHTLL 482
Query: 399 I 399
+
Sbjct: 483 L 483
Score = 160 (61.4 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 58/223 (26%), Positives = 101/223 (45%)
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSPVRCL 159
P +VS +I AG HT+ +++ G +G+ GQLG GS +R P P+ C+
Sbjct: 225 PCLVSLAPGVRIVSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRVRLVSSPHPIPCI 284
Query: 160 V--SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG-HG---TDNE------YNTKD 207
S AT+ G + + S V+ +L + + + G H TD +
Sbjct: 285 EPSSYGKATSSGVNMS---SVVQCGRVLGSYVKKIACGGRHSAVITDTGALLTFGWGLYG 341
Query: 208 SSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQK 267
+ + + + P +++L G I +VA G HT S G VY +G +G+LG +
Sbjct: 342 QCGQGSTDDELSPTCVSSLLGIRIEEVAAGLWHTTCASSDGDVYAFGGNQFGQLGTGCDQ 401
Query: 268 DEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
E +P+ ++ NV IS G+ +++ G+++ WG
Sbjct: 402 AETLPKLLEAPNLENV--NVKTISCGARHTAVITDEGRVFCWG 442
Score = 148 (57.2 bits), Expect = 6.2e-20, Sum P(2) = 6.2e-20
Identities = 59/226 (26%), Positives = 99/226 (43%)
Query: 44 LVSPTRLR--PLVGVDIRFVAAGCVSC-HCVAVDVEGRCYTWGR-NERGQLGHGDKIQRD 99
L+SP ++ P V + V+ G C +A G+ TWG ++ GQ +
Sbjct: 49 LMSPVEVKIPPAVESSWKDVSGG--GCGFAMATAESGKLITWGSTDDLGQSYVTSGKHGE 106
Query: 100 RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGS--GSIRNEIEPSPVR 157
P + ++KA AG +H V VTE+ +GW + G G + + +
Sbjct: 107 TPEPFPLPPEVCVQKAEAGWAHCVAVTENQQVYTWGWRECIPTGRVFGQVDGDSCERNIS 166
Query: 158 CLVSEVTATACGADFTVWLSS-VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
+V++++ G + SS VEG G P + + ++ ++SS +
Sbjct: 167 FSTEQVSSSSQGKKSSGGTSSQVEGRG---GGEPTKKR--RISPSKQAAENSSQSDNIDL 221
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
P ++ G IV VA G HT+A+ G V+ WG+GG G+LG
Sbjct: 222 SALPCLVSLAPGVRIVSVAAGGRHTLALSDIGQVWGWGYGGEGQLG 267
Score = 101 (40.6 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 34/125 (27%), Positives = 59/125 (47%)
Query: 290 ISAGSVNSSCTAGGGQL--YMWGKLKNNG----DDWMYPKPLMDLSGWNLRCMDSGNMHH 343
I+ G +S+ G L + WG G DD + P + L G + + +G H
Sbjct: 316 IACGGRHSAVITDTGALLTFGWGLYGQCGQGSTDDELSPTCVSSLLGIRIEEVAAGLWHT 375
Query: 344 F-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI--LEGMHVISVACGYGHSLVIV 400
+D ++G Q+G+LG G ++ +PK ++ LE ++V +++CG H+ VI
Sbjct: 376 TCASSDGDVYAFGGNQFGQLGTGC--DQAETLPKLLEAPNLENVNVKTISCGARHTAVIT 433
Query: 401 DRTNV 405
D V
Sbjct: 434 DEGRV 438
Score = 50 (22.7 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 383 GMHVISVACGYGHSLVIVD 401
G +V +ACG HS VI D
Sbjct: 310 GSYVKKIACGGRHSAVITD 328
>UNIPROTKB|F1NUG6 [details] [associations]
symbol:Gga.50841 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005929
"cilium" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
GO:GO:0005929 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104160 EMBL:AADN02011054 IPI:IPI00586770
Ensembl:ENSGALT00000026211 OMA:ENGLMFT Uniprot:F1NUG6
Length = 720
Score = 260 (96.6 bits), Expect = 9.1e-20, P = 9.1e-20
Identities = 91/296 (30%), Positives = 138/296 (46%)
Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA-CGADFTVWL 176
G HT VVT +G FG N GQLG GS +P+ V+ L E T A CG + T L
Sbjct: 45 GDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNTVRKPTCVKALKPEKTKLAVCGRNHT--L 102
Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC 236
E ++ AG GQLG G D E T + + Q + + +AA
Sbjct: 103 VYTEKGNVYAAGGNSEGQLGLG-DTEERTTFHLISF-FTNQHKIKQLAA----------- 149
Query: 237 GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVN 296
G+ + AV G ++ WG G++G ++ VP +VDV + P + IS G +
Sbjct: 150 GSYTSAAVTEDGQLFVWGDNSEGQIGLADKTCVSVPCQVDVGK------PVSSISCGYYH 203
Query: 297 SSCTAGGGQLYMWGKLKNN--G------DDWMYPKPLMDLSGWNLRCMDSGNMHHFVGAD 348
S+ G G+LY +G+ +N G + P+P++ + + + G H V +
Sbjct: 204 SAFITGDGELYTFGEPENGKLGLLPEQLKNSRVPQPVLGIME-KVNKVACGGEHTVVLTE 262
Query: 349 SSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTN 404
+ ++G QYG+LG+G K+S +PK V L + +V CG H+ VI D N
Sbjct: 263 TGVYTFGLGQYGQLGHGTLLFKTS-VPKSVKHLRSHKIHNVTCGESHTAVIADTEN 317
Score = 229 (85.7 bits), Expect = 4.0e-16, P = 4.0e-16
Identities = 98/346 (28%), Positives = 145/346 (41%)
Query: 66 VSC---HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
+SC H V G+ Y +G N+ GQLG G K +PT V L K K A GR+HT
Sbjct: 42 ISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNTVRKPTCVKALKPEKTKLAVCGRNHT 101
Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGA 182
+V TE GN A G N GQLG G + E L+S T + +
Sbjct: 102 LVYTEKGNVYAAGGNSEGQLGLG----DTEERTTFHLISFFTNQHK-------IKQLAAG 150
Query: 183 SILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTV 242
S +A + + GQL DN + K P + G+ + ++CG H+
Sbjct: 151 SYTSAAVTEDGQLFVWGDNSEGQIGLADKTCVSV---PCQVDV--GKPVSSISCGYYHSA 205
Query: 243 AVDSKGYVYTWGFGGYGRLGHR-EQ-KDEWVPRRV-DVFQRNNVLPPEAVISAGSVNSSC 299
+ G +YT+G G+LG EQ K+ VP+ V + ++ N + + +
Sbjct: 206 FITGDGELYTFGEPENGKLGLLPEQLKNSRVPQPVLGIMEKVNKVACGGEHTVVLTETGV 265
Query: 300 -TAGGGQLYMWGKLKNNGD---DWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSS---CI 352
T G GQ +G+L +G PK + L + + G H V AD+
Sbjct: 266 YTFGLGQ---YGQL-GHGTLLFKTSVPKSVKHLRSHKIHNVTCGESHTAVIADTENGLMF 321
Query: 353 SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLV 398
++G ++G+LG G + P V+ VACG H LV
Sbjct: 322 TFGDGRHGKLGLGEENFANQFDPALCSNFLSFTVLLVACGGCHMLV 367
Score = 217 (81.4 bits), Expect = 9.3e-15, P = 9.3e-15
Identities = 75/243 (30%), Positives = 115/243 (47%)
Query: 22 LLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
L GS W +G G+ + + PT ++ L + A C H + +G Y
Sbjct: 58 LYMFGSNDWGQLGL--GSKN-TVRKPTCVKALKPEKTKL--AVCGRNHTLVYTEKGNVYA 112
Query: 82 WGRNERGQLGHGDKIQRDRPTIVSELS-KYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
G N GQLG GD +R ++S + ++KIK+ AG + VTEDG +G N G
Sbjct: 113 AGGNSEGQLGLGDTEERTTFHLISFFTNQHKIKQLAAGSYTSAAVTEDGQLFVWGDNSEG 172
Query: 141 QLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTD 200
Q+G P V + V++ +CG + +++ +G + G P+ G+LG +
Sbjct: 173 QIGLADKTCVSVPCQVD-VGKPVSSISCGYYHSAFITG-DG-ELYTFGEPENGKLGLLPE 229
Query: 201 NEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGR 260
K+S V P+P + + E + KVACG HTV + G VYT+G G YG+
Sbjct: 230 Q---LKNSRV-------PQP--VLGIM-EKVNKVACGGEHTVVLTETG-VYTFGLGQYGQ 275
Query: 261 LGH 263
LGH
Sbjct: 276 LGH 278
>MGI|MGI:1351630 [details] [associations]
symbol:Sergef "secretion regulating guanine nucleotide
exchange factor" species:10090 "Mus musculus" [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005087 "Ran guanyl-nucleotide exchange factor activity"
evidence=ISA] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0050709 "negative regulation of
protein secretion" evidence=ISO] [GO:0050790 "regulation of
catalytic activity" evidence=ISA] InterPro:IPR027048
MGI:MGI:1351630 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0005730 GO:GO:0045111 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
eggNOG:COG5184 GeneTree:ENSGT00700000104160 CTD:26297
HOGENOM:HOG000154414 HOVERGEN:HBG051746 KO:K15421 OMA:NIWAPKP
OrthoDB:EOG4J1183 PANTHER:PTHR22870:SF7 EMBL:AJ243952 EMBL:AK145819
EMBL:AK147848 EMBL:BC049603 EMBL:BC119533 EMBL:BC119534
IPI:IPI00134816 RefSeq:NP_038817.1 UniGene:Mm.76659
ProteinModelPortal:Q80YD6 SMR:Q80YD6 STRING:Q80YD6 PRIDE:Q80YD6
Ensembl:ENSMUST00000033127 GeneID:27414 KEGG:mmu:27414
UCSC:uc009gyp.2 InParanoid:Q80YD6 NextBio:305446 Bgee:Q80YD6
Genevestigator:Q80YD6 GermOnline:ENSMUSG00000030839 Uniprot:Q80YD6
Length = 464
Score = 255 (94.8 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 109/369 (29%), Positives = 159/369 (43%)
Query: 67 SCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK-IKKAGAGRSHTVVV 125
SC V + WG N GQLG G K P +S+ + IK G H+ VV
Sbjct: 5 SCASETVSAAAVLFAWGANSYGQLGLGHKEDVFLPQQLSDFCQAGCIKSVTGGGGHSAVV 64
Query: 126 TEDGNSLAFGWNKHGQLGSGSIRNEIEPS---PVR-CLVSEVTATACGADFTVWLSSVEG 181
T+ G+ G NK GQLG G + + P+R C + +V ACG DFT+ L+ E
Sbjct: 65 TDGGDLFVCGLNKDGQLGLGHTEEVLRFTICKPLRGCPIRQV---ACGWDFTIMLT--EK 119
Query: 182 ASILNAGLPQYGQLG--HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
+L+ G +GQLG HG + V P+AI L E +V VA G
Sbjct: 120 GQVLSCGSNAFGQLGVPHGP------RKCVV---------PQAIECLR-EKVVCVAAGLR 163
Query: 240 HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE---AVIS-AGSV 295
H +A + G V+ WG G G R + +P + + + V E AV + AGS
Sbjct: 164 HALATTATGSVFQWGTG-LASSGRRLCPGQNLPLFLTAKEPSRVTGLENSTAVCAVAGSD 222
Query: 296 NSSCTAGGGQLYMWGKLKNN---GDDWMYPKPLMDLSGW----NLRCMDSGNMHHFVGAD 348
+S+ G+LY+WG+ K+ P P + + + + SG H +
Sbjct: 223 HSASLTDTGELYVWGRNKHGQLASRAVFLPLPQRIEAHYFQDEKVTAVWSGWTHLVAKTE 282
Query: 349 SSCI-SWGHAQYGELG--------YGPYGQKSS--------AMPKKVDILEGMHVISVAC 391
+ + +WG A YG+LG P Q SS ++P + L G IS C
Sbjct: 283 TGKVFTWGRADYGQLGRRLEPPEAQKPVEQDSSLAFQGPQNSVPSPLHCLTGATEIS--C 340
Query: 392 GYGHSLVIV 400
G H+L ++
Sbjct: 341 GSEHNLAVI 349
Score = 217 (81.4 bits), Expect = 3.7e-15, P = 3.7e-15
Identities = 95/374 (25%), Positives = 145/374 (38%)
Query: 60 FVAAGCVSC------HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIK 113
F AGC+ H V G + G N+ GQLG G + R TI L I+
Sbjct: 45 FCQAGCIKSVTGGGGHSAVVTDGGDLFVCGLNKDGQLGLGHTEEVLRFTICKPLRGCPIR 104
Query: 114 KAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSPVRCLVSEVTATACGADF 172
+ G T+++TE G L+ G N GQLG R + P + CL +V A G
Sbjct: 105 QVACGWDFTIMLTEKGQVLSCGSNAFGQLGVPHGPRKCVVPQAIECLREKVVCVAAGLRH 164
Query: 173 TVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIV 232
L++ S+ Q+G G + ++ L A+ P + L T V
Sbjct: 165 A--LATTATGSVF-----QWGT-GLASSGRRLCPGQNLPLFLTAK-EPSRVTGLENSTAV 215
Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV--FQRNNVLPPEAVI 290
G++H+ ++ G +Y WG +G+L R +P+R++ FQ V AV
Sbjct: 216 CAVAGSDHSASLTDTGELYVWGRNKHGQLASRAVFLP-LPQRIEAHYFQDEKVT---AVW 271
Query: 291 SAGSVNSSCTAGGGQLYMWGK------------------------LKNNGDDWMYPKPLM 326
S G + G+++ WG+ L G P PL
Sbjct: 272 S-GWTHLVAKTETGKVFTWGRADYGQLGRRLEPPEAQKPVEQDSSLAFQGPQNSVPSPLH 330
Query: 327 DLSG-WNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMH 385
L+G + C G+ H+ C SWG ++G G G + P +
Sbjct: 331 CLTGATEISC---GSEHNLAVIRDKCCSWGWNEHGMCGDGTESNVWTPTPVQALPPSPSR 387
Query: 386 VISVACGYGHSLVI 399
++ V CG GHSL +
Sbjct: 388 LLLVGCGAGHSLAV 401
Score = 145 (56.1 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 72/261 (27%), Positives = 106/261 (40%)
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVS 105
T +PL G IR VA G + + +G+ + G N GQLG HG + + P +
Sbjct: 93 TICKPLRGCPIRQVACGWD--FTIMLTEKGQVLSCGSNAFGQLGVPHGPR-KCVVPQAI- 148
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA 165
E + K+ AG H + T G+ F W G SG + P+ L ++ +
Sbjct: 149 ECLREKVVCVAAGLRHALATTATGS--VFQWGT-GLASSGRRLCPGQNLPL-FLTAKEPS 204
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
G + + + +V G+ +A L G+L N++ S P P+ I A
Sbjct: 205 RVTGLENSTAVCAVAGSDH-SASLTDTGELYVWGRNKHGQLASRAVFL----PLPQRIEA 259
Query: 226 --LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHR-EQKDEWVPRRVD---VFQ 279
E + V G H VA G V+TWG YG+LG R E + P D FQ
Sbjct: 260 HYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLGRRLEPPEAQKPVEQDSSLAFQ 319
Query: 280 R-NNVLPPEAVISAGSVNSSC 299
N +P G+ SC
Sbjct: 320 GPQNSVPSPLHCLTGATEISC 340
>UNIPROTKB|J9NWD8 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR017986 InterPro:IPR000569
InterPro:IPR001680 InterPro:IPR003877 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00622 PROSITE:PS50082 PROSITE:PS50237
PROSITE:PS50294 SMART:SM00119 SMART:SM00320 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016567 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449
PROSITE:PS50188 SUPFAM:SSF56204 GeneTree:ENSGT00700000104312
EMBL:AAEX03016202 Ensembl:ENSCAFT00000042764 Uniprot:J9NWD8
Length = 4118
Score = 266 (98.7 bits), Expect = 1.7e-19, P = 1.7e-19
Identities = 95/331 (28%), Positives = 153/331 (46%)
Query: 22 LLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSC-HCVAVDVEGRCY 80
+L CG + +G+ G D +L T + L G + + C S H +A+ G +
Sbjct: 3305 VLACGEGSYGRLGQ--GNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 3361
Query: 81 TWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
+WG + G+LGHG+ ++ RP + L ++ + G H+ VVT DG FG +G
Sbjct: 3362 SWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYG 3421
Query: 141 QLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
+LG G+ N+ P V L ++ ACG + T+ +S+ +G+ + G YG+LG G
Sbjct: 3422 RLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSMVWAFGDGDYGKLGLGN 3480
Query: 200 DNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG----F 255
+T SS P+ + L G I KVACGT +VA+ G+VYT+G
Sbjct: 3481 ----STAKSS----------PQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLI 3526
Query: 256 G-GYGRLGHREQKDEWVPRRVDVFQRNNVLPPE---AVISAGSVNSSCTAGGGQLYMWGK 311
G GR + + +P V + + E A+ S G V + + GQL + G
Sbjct: 3527 GLPEGR-ARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL-GH 3584
Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
+ + P + L G N+R + +G H
Sbjct: 3585 TNHVRE----PTLVTVLQGKNIRQISAGRCH 3611
Score = 251 (93.4 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 81/277 (29%), Positives = 134/277 (48%)
Query: 134 FGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
+G +HGQL RN + P+ S+ CG + T + + ++L G YG
Sbjct: 3259 WGAGRHGQLAEAG-RNVMVPAAAPSF-SQAQQVICGQNCTFVIQA--NGTVLACGEGSYG 3314
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV--ACGTN-HTVAVDSKGYV 250
+LG G N+ D V I+AL G + ++ +CG++ H++A+ G V
Sbjct: 3315 RLGQG-----NSDDLHVLTV---------ISALQGFVVTQLVTSCGSDGHSMALTESGEV 3360
Query: 251 YTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM-- 308
++WG G YG+LGH + PR+++ Q V+ +S G +S+ G+L+
Sbjct: 3361 FSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQ----MSCGFKHSAVVTSDGKLFTFG 3416
Query: 309 ---WGKLK-NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGEL 362
+G+L N + P+ + L G+ + + G H V AD S + ++G YG+L
Sbjct: 3417 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKL 3476
Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G G KSS P+KVD+L G+ + VACG S+ +
Sbjct: 3477 GLGNSTAKSS--PQKVDVLCGIGIKKVACGTQFSVAL 3511
Score = 248 (92.4 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 94/352 (26%), Positives = 155/352 (44%)
Query: 60 FVAAGCVSC--HCV-AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK-- 114
F A V C +C + G G G+LG G+ T++S L + + +
Sbjct: 3283 FSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLV 3342
Query: 115 AGAGRS-HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADF 172
G H++ +TE G ++G +G+LG G+ + P + L E V +CG
Sbjct: 3343 TSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKH 3402
Query: 173 TVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIV 232
+ ++S +G + G YG+LG G NT S+ KL P + AL G I
Sbjct: 3403 SAVVTS-DG-KLFTFGNGDYGRLGLG-----NT--SNKKL-------PERVTALEGYQIG 3446
Query: 233 KVACGTNHTVAVDSKG-YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
+VACG NHT+AV + G V+ +G G YG+LG + P++VDV + ++
Sbjct: 3447 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKK----VA 3502
Query: 292 AGSVNSSCTAGGGQLYMWG--KL----KNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV 345
G+ S G +Y +G +L + + P+ + L+G + + G H
Sbjct: 3503 CGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLA 3562
Query: 346 GADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
A + + +WG G+LG G P V +L+G ++ ++ G HS
Sbjct: 3563 LASTGDVYAWGSNSEGQLGLGHTNHVRE--PTLVTVLQGKNIRQISAGRCHS 3612
Score = 140 (54.3 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 43/156 (27%), Positives = 70/156 (44%)
Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVF-QRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
VY WG G +G+L ++ VP F Q V+ + N + A G Y
Sbjct: 3256 VYLWGAGRHGQLAEAG-RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSY- 3313
Query: 309 WGKL-KNNGDDWMYPKPLMDLSGWNLRCM--DSGNMHHFVGADSS--CISWGHAQYGELG 363
G+L + N DD + L G+ + + G+ H + S SWG YG+LG
Sbjct: 3314 -GRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLG 3372
Query: 364 YGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+G P++++ L+G V+ ++CG+ HS V+
Sbjct: 3373 HG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVV 3406
Score = 52 (23.4 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 8/25 (32%), Positives = 18/25 (72%)
Query: 219 RPRAIAALAGETIVKVACGTNHTVA 243
+P+ ++ L G I +++ GT+H++A
Sbjct: 15 KPKKVSGLDGIAIQQISAGTSHSLA 39
Score = 49 (22.3 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 14/40 (35%), Positives = 20/40 (50%)
Query: 88 GQLGHGDKIQR-DRPTIVSELSKYKIKKAGAGRSHTVVVT 126
GQ G G+ +P VS L I++ AG SH++ T
Sbjct: 2 GQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWT 41
Score = 41 (19.5 bits), Expect = 8.0e-17, Sum P(2) = 8.0e-17
Identities = 7/19 (36%), Positives = 8/19 (42%)
Query: 69 HCVAVDVEGRCYTWGRNER 87
HC DV C W +R
Sbjct: 2834 HCYRKDVSVTCIAWFSEDR 2852
Score = 39 (18.8 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 10/36 (27%), Positives = 20/36 (55%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVA 72
+G G + P ++ L G+ I+ ++AG + H +A
Sbjct: 6 QGNSTGPITKPKKVSGLDGIAIQQISAG--TSHSLA 39
>UNIPROTKB|Q9UGK8 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0050709 "negative
regulation of protein secretion" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IDA] InterPro:IPR027048 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0007165 GO:GO:0005730
GO:GO:0045111 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005087 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0050709 eggNOG:COG5184 CTD:26297
HOGENOM:HOG000154414 HOVERGEN:HBG051746 KO:K15421 OMA:NIWAPKP
OrthoDB:EOG4J1183 PANTHER:PTHR22870:SF7 EMBL:AJ243950 EMBL:AJ243951
EMBL:BC065375 IPI:IPI00015919 IPI:IPI00383576 RefSeq:NP_036271.1
UniGene:Hs.32470 ProteinModelPortal:Q9UGK8 SMR:Q9UGK8 IntAct:Q9UGK8
STRING:Q9UGK8 PhosphoSite:Q9UGK8 DMDM:38257790 PaxDb:Q9UGK8
PeptideAtlas:Q9UGK8 PRIDE:Q9UGK8 Ensembl:ENST00000265965
Ensembl:ENST00000528200 GeneID:26297 KEGG:hsa:26297 UCSC:uc001mnm.3
UCSC:uc001mnn.3 GeneCards:GC11M017767 HGNC:HGNC:17499 HPA:HPA037811
MIM:606051 neXtProt:NX_Q9UGK8 PharmGKB:PA143485610
InParanoid:Q9UGK8 PhylomeDB:Q9UGK8 GenomeRNAi:26297 NextBio:48643
ArrayExpress:Q9UGK8 Bgee:Q9UGK8 CleanEx:HS_SERGEF
Genevestigator:Q9UGK8 GermOnline:ENSG00000129158 Uniprot:Q9UGK8
Length = 458
Score = 253 (94.1 bits), Expect = 2.0e-19, P = 2.0e-19
Identities = 99/353 (28%), Positives = 149/353 (42%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYK-IKKAGAGRSHTVVVTEDGNSLAFGWNK 138
+ WG N GQLG G K P +++ K + +++ G H+ VVT+ G+ G NK
Sbjct: 18 FAWGANSYGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTDGGDLFVCGLNK 77
Query: 139 HGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLG- 196
GQLG G + +P + L + ACG DFT+ L+ E +L+ G +GQLG
Sbjct: 78 DGQLGLGHTEDIPYFTPCKSLFGCPIQQVACGWDFTIMLT--ENGQVLSCGSNSFGQLGV 135
Query: 197 -HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
HG + V P+AI L E +V +A G H VA + G V+ WG
Sbjct: 136 PHGP------RRCVV---------PQAIE-LHKEKVVCIAAGLRHAVAATASGIVFQWGT 179
Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE----AVISAGSVNSSCTAGGGQLYMWGK 311
G G R + +P + + V E + AGS +S+ G++Y+WG
Sbjct: 180 G-LASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGS 238
Query: 312 LKNN---GDDWMYPKPLMD----LSGWNLRCMDSGNMHHFVGADSS-CISWGHAQYGELG 363
K+ + P P + + SG H ++ +WG A YG+LG
Sbjct: 239 NKHGQLANEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLG 298
Query: 364 -----Y-G----------PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
Y G P + ++MP L G V+CG H+L I+
Sbjct: 299 RKLETYEGWKLEKQDSFLPCSRPPNSMPSSPHCLTG--ATEVSCGSEHNLAII 349
Score = 191 (72.3 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 89/362 (24%), Positives = 139/362 (38%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP--TIVSELSKYKIKKAGAGRSHTVVVT 126
H V G + G N+ GQLG G D P T L I++ G T+++T
Sbjct: 60 HSAVVTDGGDLFVCGLNKDGQLGLGHT--EDIPYFTPCKSLFGCPIQQVACGWDFTIMLT 117
Query: 127 EDGNSLAFGWNKHGQLG-SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASIL 185
E+G L+ G N GQLG R + P + +V A G V A+
Sbjct: 118 ENGQVLSCGSNSFGQLGVPHGPRRCVVPQAIELHKEKVVCIAAGLRHAV-------AATA 170
Query: 186 NAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVD 245
+ + Q+G G + ++ L + A+ P + L + V G++H+ ++
Sbjct: 171 SGIVFQWGT-GLASCGRRLCPGQTLPLFFTAK-EPSRVTGLENSKAMCVLAGSDHSASLT 228
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV--FQRNNVLPPEAVISAGSVNSSCTAGG 303
G VY WG +G+L + E VP++++ FQ V I +G +
Sbjct: 229 DAGEVYVWGSNKHGQLAN-EAAFLPVPQKIEAHCFQNEKV----TAIWSGWTHLVAQTET 283
Query: 304 GQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDS------------------------- 338
G+++ WG+ D + L GW L DS
Sbjct: 284 GKMFTWGR----ADYGQLGRKLETYEGWKLEKQDSFLPCSRPPNSMPSSPHCLTGATEVS 339
Query: 339 -GNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+ H+ C SWG ++G G G + + PK V L + V CG GHSL
Sbjct: 340 CGSEHNLAIIGGVCYSWGWNEHGMCGDGT--EANVWAPKPVQALLSSSGLLVGCGAGHSL 397
Query: 398 VI 399
+
Sbjct: 398 AL 399
Score = 124 (48.7 bits), Expect = 0.00010, P = 0.00010
Identities = 41/164 (25%), Positives = 77/164 (46%)
Query: 243 AVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSVNSSCT 300
A + ++ WG YG+LG ++D +P+ Q N+ P +V I+ G +S+
Sbjct: 10 AAPAAAALFAWGANSYGQLGLGHKEDVLLPQ-----QLNDFCKPRSVRRITGGGGHSAVV 64
Query: 301 AGGGQLYMWGKLKNN--G----DDWMYPKPLMDLSGWNLRCMDSG-NMHHFVGADSSCIS 353
GG L++ G K+ G +D Y P L G ++ + G + + + +S
Sbjct: 65 TDGGDLFVCGLNKDGQLGLGHTEDIPYFTPCKSLFGCPIQQVACGWDFTIMLTENGQVLS 124
Query: 354 WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G +G+LG P+G + +P+ ++ L V+ +A G H++
Sbjct: 125 CGSNSFGQLGV-PHGPRRCVVPQAIE-LHKEKVVCIAAGLRHAV 166
>UNIPROTKB|G3V1B4 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CH471064 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 PANTHER:PTHR22870:SF7 UniGene:Hs.32470
HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058 EMBL:AC124078
ProteinModelPortal:G3V1B4 SMR:G3V1B4 Ensembl:ENST00000525422
ArrayExpress:G3V1B4 Bgee:G3V1B4 Uniprot:G3V1B4
Length = 354
Score = 246 (91.7 bits), Expect = 2.2e-19, P = 2.2e-19
Identities = 86/300 (28%), Positives = 130/300 (43%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYK-IKKAGAGRSHTVVVTEDGNSLAFGWNK 138
+ WG N GQLG G K P +++ K + +++ G H+ VVT+ G+ G NK
Sbjct: 18 FAWGANSYGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTDGGDLFVCGLNK 77
Query: 139 HGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLG- 196
GQLG G + +P + L + ACG DFT+ L+ E +L+ G +GQLG
Sbjct: 78 DGQLGLGHTEDIPYFTPCKSLFGCPIQQVACGWDFTIMLT--ENGQVLSCGSNSFGQLGV 135
Query: 197 -HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
HG + V P+AI L E +V +A G H VA + G V+ WG
Sbjct: 136 PHGP------RRCVV---------PQAIE-LHKEKVVCIAAGLRHAVAATASGIVFQWGT 179
Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE----AVISAGSVNSSCTAGGGQLYMWGK 311
G G R + +P + + V E + AGS +S+ G++Y+WG
Sbjct: 180 G-LASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGS 238
Query: 312 LKNN---GDDWMYPKPLMD----LSGWNLRCMDSGNMHHFVGADSS-CISWGHAQYGELG 363
K+ + P P + + SG H ++ +WG A YG+LG
Sbjct: 239 NKHGQLANEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLG 298
Score = 168 (64.2 bits), Expect = 7.2e-10, P = 7.2e-10
Identities = 69/275 (25%), Positives = 111/275 (40%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP--TIVSELSKYKIKKAGAGRSHTVVVT 126
H V G + G N+ GQLG G D P T L I++ G T+++T
Sbjct: 60 HSAVVTDGGDLFVCGLNKDGQLGLGHT--EDIPYFTPCKSLFGCPIQQVACGWDFTIMLT 117
Query: 127 EDGNSLAFGWNKHGQLG-SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASIL 185
E+G L+ G N GQLG R + P + +V A G V A+
Sbjct: 118 ENGQVLSCGSNSFGQLGVPHGPRRCVVPQAIELHKEKVVCIAAGLRHAV-------AATA 170
Query: 186 NAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVD 245
+ + Q+G G + ++ L + A+ P + L + V G++H+ ++
Sbjct: 171 SGIVFQWGT-GLASCGRRLCPGQTLPLFFTAK-EPSRVTGLENSKAMCVLAGSDHSASLT 228
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV--FQRNNVLPPEAVISAGSVNSSCTAGG 303
G VY WG +G+L + E VP++++ FQ V I +G +
Sbjct: 229 DAGEVYVWGSNKHGQLAN-EAAFLPVPQKIEAHCFQNEKV----TAIWSGWTHLVAQTET 283
Query: 304 GQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDS 338
G+++ WG+ D + L GW L DS
Sbjct: 284 GKMFTWGR----ADYGQLGRKLETYEGWKLEKQDS 314
Score = 124 (48.7 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 41/164 (25%), Positives = 77/164 (46%)
Query: 243 AVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSVNSSCT 300
A + ++ WG YG+LG ++D +P+ Q N+ P +V I+ G +S+
Sbjct: 10 AAPAAAALFAWGANSYGQLGLGHKEDVLLPQ-----QLNDFCKPRSVRRITGGGGHSAVV 64
Query: 301 AGGGQLYMWGKLKNN--G----DDWMYPKPLMDLSGWNLRCMDSG-NMHHFVGADSSCIS 353
GG L++ G K+ G +D Y P L G ++ + G + + + +S
Sbjct: 65 TDGGDLFVCGLNKDGQLGLGHTEDIPYFTPCKSLFGCPIQQVACGWDFTIMLTENGQVLS 124
Query: 354 WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G +G+LG P+G + +P+ ++ L V+ +A G H++
Sbjct: 125 CGSNSFGQLGV-PHGPRRCVVPQAIE-LHKEKVVCIAAGLRHAV 166
>RGD|1307803 [details] [associations]
symbol:Herc3 "HECT and RLD domain containing E3 ubiquitin
protein ligase 3" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0005737 "cytoplasm" evidence=ISO;IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 RGD:1307803
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 EMBL:CH474011 IPI:IPI00568958 UniGene:Rn.203362
Ensembl:ENSRNOT00000009694 UCSC:RGD:1307803 Uniprot:D3ZYI2
Length = 909
Score = 258 (95.9 bits), Expect = 2.4e-19, P = 2.4e-19
Identities = 63/201 (31%), Positives = 97/201 (48%)
Query: 65 CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI-QRDRPTIVSELSKYKIKKAGAGRSHTV 123
C + HC+A+ +G+ +TWG+N GQLG G + + P V L + + AG +H+
Sbjct: 144 CGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSF 203
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVWLSSVEGA 182
++ G +G N GQLG ++ P V+ L +V +CG + T L+ G
Sbjct: 204 ALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 263
Query: 183 SILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTV 242
AG GQLGH + N+ + PR + L G + ++ACG HT+
Sbjct: 264 FTFGAG--SCGQLGHDSVND--------------EVNPRRVLELMGSEVTQIACGRQHTL 307
Query: 243 A-VDSKGYVYTWGFGGYGRLG 262
A V S G +Y +G G G+LG
Sbjct: 308 ALVPSSGLIYAFGCGAKGQLG 328
Score = 239 (89.2 bits), Expect = 4.2e-17, P = 4.2e-17
Identities = 69/183 (37%), Positives = 90/183 (49%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
SP R+R L G+ + VAAG H A+ + G + WG N GQLG D+ R+ P V
Sbjct: 180 SPQRVRSLEGIPLAQVAAG--GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVK 237
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L K+ G HT V+T+ G FG GQLG S+ +E+ P V L+ SEVT
Sbjct: 238 LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVT 297
Query: 165 ATACGADFTVWLSSVEGASILNA-GLPQYGQLGHGTDNEYNTK-DSSVK---LAYEAQPR 219
ACG T L+ V + ++ A G GQLG G + N K S VK A+ Q
Sbjct: 298 QIACGRQHT--LALVPSSGLIYAFGCGAKGQLGTG--HTCNVKCPSPVKGHWAAHSGQLS 353
Query: 220 PRA 222
RA
Sbjct: 354 ARA 356
Score = 228 (85.3 bits), Expect = 7.6e-16, P = 7.6e-16
Identities = 65/224 (29%), Positives = 101/224 (45%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG---HGDKIQRDRPTIVSELSKYKIK 113
D + C H +A+ G+ ++WG GQLG D + P ++ +L++ I
Sbjct: 83 DQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAV--PRLIQKLNQQTIL 140
Query: 114 KAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSPVRCLVS-EVTATACGAD 171
+ G H + + DG +G N HGQLG G ++ P VR L + A G
Sbjct: 141 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGA 200
Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
+ LS + GA + G+ GQLG + + ++S P + L + +
Sbjct: 201 HSFALS-LSGA-VFGWGMNNAGQLGLSDEKD---RES-----------PCHVKLLRTQKV 244
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
V ++CG HT + G V+T+G G G+LGH DE PRRV
Sbjct: 245 VYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRV 288
Score = 225 (84.3 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 75/278 (26%), Positives = 121/278 (43%)
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRC-LVSEVTATACGADFTVWLSSVEGASILNAGLP 190
L +G+ GQ G S I P C VS+ + + +E + G+
Sbjct: 2 LCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVN 61
Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
GQLGH + E N +P I ALA + I+ VACG +H++A+ +G +
Sbjct: 62 TKGQLGH--EREGN--------------KPEQIGALADQHIIHVACGESHSLALSDRGQL 105
Query: 251 YTWGFGGYGRLGHREQKDEW-VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
++WG G G+LG +D VPR + + +L +S G+ + A GQ + W
Sbjct: 106 FSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQ----VSCGNWHCLALAADGQFFTW 161
Query: 310 GKLKNN----GDDW---MYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGE 361
GK + G ++ P+ + L G L + +G H F + S + WG G+
Sbjct: 162 GKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQ 221
Query: 362 LGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
LG +K P V +L V+ ++CG H+ V+
Sbjct: 222 LGLSD--EKDRESPCHVKLLRTQKVVYISCGEEHTAVL 257
Score = 220 (82.5 bits), Expect = 6.2e-15, P = 6.2e-15
Identities = 92/327 (28%), Positives = 144/327 (44%)
Query: 82 WGRNERGQLGHGDKIQR--DRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
WG GQ G +Q P + +S IK+ G +H+V + EDG G N
Sbjct: 4 WGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTK 63
Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
GQLG N+ P + L + + ACG ++ LS + + + G GQLG
Sbjct: 64 GQLGHEREGNK--PEQIGALADQHIIHVACGESHSLALS--DRGQLFSWGAGSDGQLGLM 119
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
T T+DS +A PR I L +TI++V+CG H +A+ + G +TWG +
Sbjct: 120 T-----TEDS---VAV-----PRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSH 166
Query: 259 GRLG-HREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAG--GGQLYMWGKLKNN 315
G+LG +E + P+RV + L A A S S + G + G+L +
Sbjct: 167 GQLGLGKEFPSQTSPQRVRSLE-GIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLS 225
Query: 316 GD-DWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSA 373
+ D P + L + + G H V S + ++G G+LG+ + +
Sbjct: 226 DEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVN- 284
Query: 374 MPKKVDILEGMHVISVACGYGHSLVIV 400
P++V L G V +ACG H+L +V
Sbjct: 285 -PRRVLELMGSEVTQIACGRQHTLALV 310
>UNIPROTKB|F1PB99 [details] [associations]
symbol:HERC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:KDWITNT EMBL:AAEX03016753
EMBL:AAEX03016752 Ensembl:ENSCAFT00000015560 Uniprot:F1PB99
Length = 1025
Score = 257 (95.5 bits), Expect = 3.8e-19, P = 3.8e-19
Identities = 82/258 (31%), Positives = 123/258 (47%)
Query: 65 CVSCHCVAVDVE--GRCYTWGRNERGQLGHGDKIQR-DRPTIVSELSKYKIKKAGAGRSH 121
C H +A+ G + WG+N GQLG G P +V LS + + AG++H
Sbjct: 142 CGDYHSLALSKGQGGELFAWGQNLHGQLGVGRLFTSIPTPQLVEHLSGVPLVQISAGKAH 201
Query: 122 TVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVE 180
++ ++ GN ++G N GQLG G E PS + L ++ V ACG T L+ +
Sbjct: 202 SMALSMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEALDNQKVEFLACGGSHTALLTK-D 260
Query: 181 GASILNAGLPQYGQLGHG-TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
G + G +YGQLGH T NE RPR + LAG + +VACG+
Sbjct: 261 GL-VFTFGAGKYGQLGHNSTQNEL---------------RPRLVTELAGNRVTQVACGSR 304
Query: 240 -HTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNS 297
HT+A V G V+++G G G+LG+ ++ +P + + N L E+ S +
Sbjct: 305 WHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKL-PSNEELKFESRTSEKEL-- 361
Query: 298 SCTAGGGQ-LYMWGKLKN 314
AGG Q + +W KN
Sbjct: 362 IMIAGGNQSILLWMGKKN 379
Score = 254 (94.5 bits), Expect = 8.8e-19, P = 8.8e-19
Identities = 64/197 (32%), Positives = 104/197 (52%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G L ++ +P + L GV + ++AG H +A+ + G Y+WGRN+ GQLG G
Sbjct: 172 GRLFTSIPTPQLVEHLSGVPLVQISAG--KAHSMALSMSGNIYSWGRNDLGQLGLGHTNG 229
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
D P+++ L K++ G SHT ++T+DG FG K+GQLG S +NE+ P V
Sbjct: 230 EDFPSLIEALDNQKVEFLACGGSHTALLTKDGLVFTFGAGKYGQLGHNSTQNELRPRLVT 289
Query: 158 CLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG-TDNEY---NTK-DSSVK 211
L + VT ACG+ + + + + G + GQLG+G T N+ K S+ +
Sbjct: 290 ELAGNRVTQVACGSRWHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNEE 349
Query: 212 LAYEAQPRPRAIAALAG 228
L +E++ + + +AG
Sbjct: 350 LKFESRTSEKELIMIAG 366
Score = 157 (60.3 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 56/182 (30%), Positives = 84/182 (46%)
Query: 107 LSKYKIKKAGAGRSHTVVVT--EDGNSLAFGWNKHGQLGSGSIRNEIEPSP--VRCLVS- 161
L + I + G H++ ++ + G A+G N HGQLG G + I P+P V L
Sbjct: 132 LQEKSIIQITCGDYHSLALSKGQGGELFAWGQNLHGQLGVGRLFTSI-PTPQLVEHLSGV 190
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
+ + G ++ LS + G +I + G GQLG G N + P
Sbjct: 191 PLVQISAGKAHSMALS-MSG-NIYSWGRNDLGQLGLGHTN--------------GEDFPS 234
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
I AL + + +ACG +HT + G V+T+G G YG+LGH ++E PR V N
Sbjct: 235 LIEALDNQKVEFLACGGSHTALLTKDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGN 294
Query: 282 NV 283
V
Sbjct: 295 RV 296
Score = 152 (58.6 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 54/200 (27%), Positives = 88/200 (44%)
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGY---VYTWGFGGYGRLGHREQKDEW 270
Y + R L ++I+++ CG H++A+ SKG ++ WG +G+LG
Sbjct: 120 YSIEHASRFQCILQEKSIIQITCGDYHSLAL-SKGQGGELFAWGQNLHGQLGVGRLFTS- 177
Query: 271 VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK--------NNGDDWMYP 322
+P V + V P ISAG +S + G +Y WG+ NG+D +P
Sbjct: 178 IPTPQLVEHLSGV--PLVQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTNGED--FP 233
Query: 323 KPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDIL 381
+ L + + G H + D ++G +YG+LG+ ++ P+ V L
Sbjct: 234 SLIEALDNQKVEFLACGGSHTALLTKDGLVFTFGAGKYGQLGHN--STQNELRPRLVTEL 291
Query: 382 EGMHVISVACGYG-HSLVIV 400
G V VACG H+L V
Sbjct: 292 AGNRVTQVACGSRWHTLAYV 311
Score = 148 (57.2 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 55/235 (23%), Positives = 103/235 (43%)
Query: 154 SPVRCLVSE--VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVK 211
S +C++ E + CG ++ LS +G + G +GQLG G +
Sbjct: 126 SRFQCILQEKSIIQITCGDYHSLALSKGQGGELFAWGQNLHGQLGVG------------R 173
Query: 212 LAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV 271
L + + P P+ + L+G +V+++ G H++A+ G +Y+WG G+LG E
Sbjct: 174 L-FTSIPTPQLVEHLSGVPLVQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDF 232
Query: 272 PRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM----WGKLKNNG-DDWMYPKPLM 326
P ++ V E + GS + T G +G+L +N + + P+ +
Sbjct: 233 PSLIEALDNQKV---EFLACGGSHTALLTKDGLVFTFGAGKYGQLGHNSTQNELRPRLVT 289
Query: 327 DLSGWNLRCMDSGNMHH---FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV 378
+L+G + + G+ H +V S+G + G+LG G + +P K+
Sbjct: 290 ELAGNRVTQVACGSRWHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKL 344
>UNIPROTKB|A2VDP7 [details] [associations]
symbol:HERC3 "HERC3 protein" species:9913 "Bos taurus"
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 GeneTree:ENSGT00660000095216 CTD:8916
HOGENOM:HOG000208452 HOVERGEN:HBG050878 KO:K10614 OMA:SPAVDFR
OrthoDB:EOG4RBQHS EMBL:DAAA02017014 EMBL:BC133341 IPI:IPI00710875
RefSeq:NP_001077132.1 UniGene:Bt.85959 Ensembl:ENSBTAT00000013357
GeneID:510924 KEGG:bta:510924 InParanoid:A2VDP7 NextBio:20869685
Uniprot:A2VDP7
Length = 1050
Score = 257 (95.5 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 64/201 (31%), Positives = 97/201 (48%)
Query: 65 CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI-QRDRPTIVSELSKYKIKKAGAGRSHTV 123
C + HC+A+ +G+ +TWGRN GQLG G + + P V L + + AG +H+
Sbjct: 144 CGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSF 203
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVWLSSVEGA 182
++ G +G N GQLG ++ P V+ L +V +CG + T L+ G
Sbjct: 204 ALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 263
Query: 183 SILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTV 242
AG GQLGH + N+ + PR + L G + ++ACG HT+
Sbjct: 264 FTFGAG--SCGQLGHDSMND--------------EVNPRRVLELMGSEVTQIACGRQHTL 307
Query: 243 A-VDSKGYVYTWGFGGYGRLG 262
A V S G +Y +G G G+LG
Sbjct: 308 AFVPSSGLIYAFGCGARGQLG 328
Score = 242 (90.2 bits), Expect = 2.3e-17, P = 2.3e-17
Identities = 92/331 (27%), Positives = 146/331 (44%)
Query: 82 WGRNERGQLGHGDKIQR--DRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
WG GQ G +Q P + +S +K+ G +H+V + EDG G N
Sbjct: 4 WGYWSLGQPGISPNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGVNTK 63
Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
GQLG N+ P + L + + ACG ++ LS +G + + G GQLG
Sbjct: 64 GQLGHEREGNK--PEQIGALADQHIVHVACGESHSLALSD-QG-QLFSWGAGSDGQLG-- 117
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
T + SV + PR I L +TI++V+CG H +A+ + G +TWG +
Sbjct: 118 ----LMTIEDSVAV-------PRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGRNSH 166
Query: 259 GRLG-HREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGD 317
G+LG +E + P+RV + + P A + AG +S + G ++ WG + N G
Sbjct: 167 GQLGLGKEFPSQASPQRVRSLE--GI--PLAQVVAGGAHSFALSLSGAVFGWG-MNNAGQ 221
Query: 318 -------DWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQ 369
D P + L + + G H V S + ++G G+LG+
Sbjct: 222 LGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMND 281
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+ + P++V L G V +ACG H+L V
Sbjct: 282 EVN--PRRVLELMGSEVTQIACGRQHTLAFV 310
Score = 234 (87.4 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 72/208 (34%), Positives = 98/208 (47%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
SP R+R L G+ + V AG H A+ + G + WG N GQLG D+ R+ P V
Sbjct: 180 SPQRVRSLEGIPLAQVVAG--GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVK 237
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L K+ G HT V+T+ G FG GQLG S+ +E+ P V L+ SEVT
Sbjct: 238 LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVT 297
Query: 165 ATACGADFTVWLSSVEGASILNA-GLPQYGQLGHGTDNEYNTK-DSSVK---LAYEAQPR 219
ACG T L+ V + ++ A G GQLG G + N K S VK A+ Q
Sbjct: 298 QIACGRQHT--LAFVPSSGLIYAFGCGARGQLGTG--HTCNVKCPSPVKGYWAAHSGQLS 353
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSK 247
RA + ++ G + T + SK
Sbjct: 354 ARA-DRFKYHIVKQIFSGGDQTFVLCSK 380
Score = 230 (86.0 bits), Expect = 5.6e-16, P = 5.6e-16
Identities = 64/223 (28%), Positives = 99/223 (44%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH---GDKIQRDRPTIVSELSKYKIK 113
D V C H +A+ +G+ ++WG GQLG D + P ++ +L++ I
Sbjct: 83 DQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTIEDSVAV--PRLIQKLNQQTIL 140
Query: 114 KAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSPVRCLVSEVTATACGADF 172
+ G H + + DG +G N HGQLG G ++ P VR L A
Sbjct: 141 QVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGA 200
Query: 173 TVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIV 232
+ S+ GA + G+ GQLG + + ++S P + L + +V
Sbjct: 201 HSFALSLSGA-VFGWGMNNAGQLGLSDEKD---RES-----------PCHVKLLRTQKVV 245
Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
++CG HT + G V+T+G G G+LGH DE PRRV
Sbjct: 246 YISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288
Score = 214 (80.4 bits), Expect = 3.6e-14, P = 3.6e-14
Identities = 73/278 (26%), Positives = 120/278 (43%)
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRC-LVSEVTATACGADFTVWLSSVEGASILNAGLP 190
L +G+ GQ G I P C +S+ + + +E + G+
Sbjct: 2 LCWGYWSLGQPGISPNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGVN 61
Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
GQLGH + E N +P I ALA + IV VACG +H++A+ +G +
Sbjct: 62 TKGQLGH--EREGN--------------KPEQIGALADQHIVHVACGESHSLALSDQGQL 105
Query: 251 YTWGFGGYGRLGHREQKDEW-VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
++WG G G+LG +D VPR + + +L +S G+ + A GQ + W
Sbjct: 106 FSWGAGSDGQLGLMTIEDSVAVPRLIQKLNQQTILQ----VSCGNWHCLALAADGQFFTW 161
Query: 310 GKLKNN----GDDW---MYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGE 361
G+ + G ++ P+ + L G L + +G H F + S + WG G+
Sbjct: 162 GRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAGQ 221
Query: 362 LGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
LG +K P V +L V+ ++CG H+ V+
Sbjct: 222 LGLSD--EKDRESPCHVKLLRTQKVVYISCGEEHTAVL 257
>UNIPROTKB|Q15034 [details] [associations]
symbol:HERC3 "Probable E3 ubiquitin-protein ligase HERC3"
species:9606 "Homo sapiens" [GO:0016023 "cytoplasmic
membrane-bounded vesicle" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IBA] [GO:0005737 "cytoplasm" evidence=IDA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0016023 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 EMBL:CH471057 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 EMBL:D25215 EMBL:AK289990
IPI:IPI00014216 RefSeq:NP_001258531.1 RefSeq:NP_055421.1
UniGene:Hs.35804 ProteinModelPortal:Q15034 SMR:Q15034 IntAct:Q15034
MINT:MINT-158126 STRING:Q15034 PhosphoSite:Q15034 DMDM:2495699
PaxDb:Q15034 PRIDE:Q15034 DNASU:8916 Ensembl:ENST00000264345
Ensembl:ENST00000402738 GeneID:8916 KEGG:hsa:8916 UCSC:uc003hrw.1
CTD:8916 GeneCards:GC04P089444 HGNC:HGNC:4876 HPA:HPA039170
MIM:605200 neXtProt:NX_Q15034 PharmGKB:PA29251 HOGENOM:HOG000208452
HOVERGEN:HBG050878 InParanoid:Q15034 KO:K10614 OMA:SPAVDFR
OrthoDB:EOG4RBQHS PhylomeDB:Q15034 ChiTaRS:HERC3 GenomeRNAi:8916
NextBio:33540 ArrayExpress:Q15034 Bgee:Q15034 CleanEx:HS_HERC3
Genevestigator:Q15034 Uniprot:Q15034
Length = 1050
Score = 257 (95.5 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 63/201 (31%), Positives = 97/201 (48%)
Query: 65 CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI-QRDRPTIVSELSKYKIKKAGAGRSHTV 123
C + HC+A+ +G+ +TWG+N GQLG G + + P V L + + AG +H+
Sbjct: 144 CGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSF 203
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVWLSSVEGA 182
++ G +G N GQLG ++ P V+ L +V +CG + T L+ G
Sbjct: 204 ALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 263
Query: 183 SILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTV 242
AG GQLGH + N+ + PR + L G + ++ACG HT+
Sbjct: 264 FTFGAG--SCGQLGHDSMND--------------EVNPRRVLELMGSEVTQIACGRQHTL 307
Query: 243 A-VDSKGYVYTWGFGGYGRLG 262
A V S G +Y +G G G+LG
Sbjct: 308 AFVPSSGLIYAFGCGARGQLG 328
Score = 238 (88.8 bits), Expect = 6.8e-17, P = 6.8e-17
Identities = 73/208 (35%), Positives = 99/208 (47%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
SP R+R L G+ + VAAG H A+ + G + WG N GQLG D+ R+ P V
Sbjct: 180 SPQRVRSLEGIPLAQVAAG--GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVK 237
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L K+ G HT V+T+ G FG GQLG S+ +E+ P V L+ SEVT
Sbjct: 238 LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVT 297
Query: 165 ATACGADFTVWLSSVEGASILNA-GLPQYGQLGHGTDNEYNTK-DSSVK---LAYEAQPR 219
ACG T L+ V + ++ A G GQLG G + N K S VK A+ Q
Sbjct: 298 QIACGRQHT--LAFVPSSGLIYAFGCGARGQLGTG--HTCNVKCPSPVKGYWAAHSGQLS 353
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSK 247
RA + ++ G + T + SK
Sbjct: 354 ARA-DRFKYHIVKQIFSGGDQTFVLCSK 380
Score = 230 (86.0 bits), Expect = 5.6e-16, P = 5.6e-16
Identities = 65/224 (29%), Positives = 101/224 (45%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG---HGDKIQRDRPTIVSELSKYKIK 113
D + C H +A+ G+ ++WG GQLG D + P ++ +L++ I
Sbjct: 83 DQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAV--PRLIQKLNQQTIL 140
Query: 114 KAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSPVRCLVS-EVTATACGAD 171
+ G H + + DG +G N HGQLG G ++ P VR L + A G
Sbjct: 141 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 200
Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
+ LS + GA + G+ GQLG + + ++S P + L + +
Sbjct: 201 HSFALS-LSGA-VFGWGMNNAGQLGLSDEKD---RES-----------PCHVKLLRTQKV 244
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
V ++CG HT + G V+T+G G G+LGH DE PRRV
Sbjct: 245 VYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288
Score = 225 (84.3 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 74/278 (26%), Positives = 121/278 (43%)
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRC-LVSEVTATACGADFTVWLSSVEGASILNAGLP 190
L +G+ GQ G + I P C +S+ + + +E + GL
Sbjct: 2 LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61
Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
GQLGH + E N +P I ALA + I+ VACG +H++A+ +G +
Sbjct: 62 TKGQLGH--EREGN--------------KPEQIGALADQHIIHVACGESHSLALSDRGQL 105
Query: 251 YTWGFGGYGRLGHREQKDEW-VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
++WG G G+LG +D VPR + + +L +S G+ + A GQ + W
Sbjct: 106 FSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQ----VSCGNWHCLALAADGQFFTW 161
Query: 310 GKLKNN----GDDW---MYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGE 361
GK + G ++ P+ + L G L + +G H F + S + WG G+
Sbjct: 162 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQ 221
Query: 362 LGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
LG +K P V +L V+ ++CG H+ V+
Sbjct: 222 LGLSD--EKDRESPCHVKLLRTQKVVYISCGEEHTAVL 257
Score = 218 (81.8 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 91/327 (27%), Positives = 143/327 (43%)
Query: 82 WGRNERGQLGHGDKIQR--DRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
WG GQ G +Q P + +S +K+ G +H+V + EDG G N
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
GQLG N+ P + L + + ACG ++ LS + + + G GQLG
Sbjct: 64 GQLGHEREGNK--PEQIGALADQHIIHVACGESHSLALS--DRGQLFSWGAGSDGQLGLM 119
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
T T+DS +A PR I L +TI++V+CG H +A+ + G +TWG +
Sbjct: 120 T-----TEDS---VAV-----PRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSH 166
Query: 259 GRLG-HREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAG--GGQLYMWGKLKNN 315
G+LG +E + P+RV + L A A S S + G + G+L +
Sbjct: 167 GQLGLGKEFPSQASPQRVRSLE-GIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLS 225
Query: 316 GD-DWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSA 373
+ D P + L + + G H V S + ++G G+LG+ + +
Sbjct: 226 DEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN- 284
Query: 374 MPKKVDILEGMHVISVACGYGHSLVIV 400
P++V L G V +ACG H+L V
Sbjct: 285 -PRRVLELMGSEVTQIACGRQHTLAFV 310
>UNIPROTKB|F1RW66 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:8916 KO:K10614 OMA:SPAVDFR
EMBL:FP015981 EMBL:CU915521 RefSeq:XP_003129374.3 UniGene:Ssc.42366
Ensembl:ENSSSCT00000010082 GeneID:100517903 KEGG:ssc:100517903
Uniprot:F1RW66
Length = 1050
Score = 255 (94.8 bits), Expect = 7.0e-19, P = 7.0e-19
Identities = 63/201 (31%), Positives = 96/201 (47%)
Query: 65 CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI-QRDRPTIVSELSKYKIKKAGAGRSHTV 123
C + HC+A+ +G+ +TWG+N GQLG G + + P V L + + AG +H+
Sbjct: 144 CGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSF 203
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVWLSSVEGA 182
++ G +G N GQLG + P V+ L +V +CG + T L+ G
Sbjct: 204 ALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRAQKVVYISCGEEHTAVLTKSGGV 263
Query: 183 SILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTV 242
AG GQLGH + N+ + PR + L G + ++ACG HT+
Sbjct: 264 FTFGAG--SCGQLGHDSMND--------------EVNPRRVLELMGSEVTQIACGRQHTL 307
Query: 243 A-VDSKGYVYTWGFGGYGRLG 262
A V S G +Y +G G G+LG
Sbjct: 308 AFVPSSGLIYAFGCGARGQLG 328
Score = 238 (88.8 bits), Expect = 6.8e-17, P = 6.8e-17
Identities = 73/208 (35%), Positives = 99/208 (47%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
SP R+R L G+ + VAAG H A+ + G + WG N GQLG D+ R+ P V
Sbjct: 180 SPQRVRSLEGIPLAQVAAG--GAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVK 237
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L K+ G HT V+T+ G FG GQLG S+ +E+ P V L+ SEVT
Sbjct: 238 LLRAQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVT 297
Query: 165 ATACGADFTVWLSSVEGASILNA-GLPQYGQLGHGTDNEYNTK-DSSVK---LAYEAQPR 219
ACG T L+ V + ++ A G GQLG G + N K S VK A+ Q
Sbjct: 298 QIACGRQHT--LAFVPSSGLIYAFGCGARGQLGTG--HTCNVKCPSPVKGYWAAHSGQLS 353
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSK 247
RA + ++ G + T + SK
Sbjct: 354 ARA-DRFKYHIVKQIFSGGDQTFVLCSK 380
Score = 237 (88.5 bits), Expect = 8.8e-17, P = 8.8e-17
Identities = 68/222 (30%), Positives = 99/222 (44%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTIVSELSKYKIKKA 115
D V C H +A+ G+ ++WG GQLG + P ++ +L++ I +
Sbjct: 83 DEHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEESVAVPRLIQKLNQQTILQV 142
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSPVRCLVS-EVTATACGADFT 173
G H + + DG +G N HGQLG G ++ P VR L + A G +
Sbjct: 143 SCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHS 202
Query: 174 VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
LS + GA + G+ GQLG +D E VKL L + +V
Sbjct: 203 FALS-LSGA-VFGWGMNNAGQLGL-SDEEDRESPCHVKL-------------LRAQKVVY 246
Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
++CG HT + G V+T+G G G+LGH DE PRRV
Sbjct: 247 ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288
Score = 225 (84.3 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 91/327 (27%), Positives = 141/327 (43%)
Query: 82 WGRNERGQLGHGDKIQR--DRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
WG GQ G +Q P + +S +K+ G H+V + EDG G N
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGDHSVFLLEDGEVYTCGLNTK 63
Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
GQLG N+ P + L E + ACG ++ LS + + + G GQLG
Sbjct: 64 GQLGHEREGNK--PEQIGALADEHIVHVACGESHSLALS--DRGQLFSWGAGSDGQLGLM 119
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
T E SV + PR I L +TI++V+CG H +A+ + G +TWG +
Sbjct: 120 TTEE------SVAV-------PRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSH 166
Query: 259 GRLG-HREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAG--GGQLYMWGKLK-N 314
G+LG +E + P+RV + L A A S S + G + G+L +
Sbjct: 167 GQLGLGKEFPSQASPQRVRSLE-GIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLS 225
Query: 315 NGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSA 373
+ +D P + L + + G H V S + ++G G+LG+ + +
Sbjct: 226 DEEDRESPCHVKLLRAQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN- 284
Query: 374 MPKKVDILEGMHVISVACGYGHSLVIV 400
P++V L G V +ACG H+L V
Sbjct: 285 -PRRVLELMGSEVTQIACGRQHTLAFV 310
Score = 224 (83.9 bits), Expect = 2.7e-15, P = 2.7e-15
Identities = 75/278 (26%), Positives = 121/278 (43%)
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRC-LVSEVTATACGADFTVWLSSVEGASILNAGLP 190
L +G+ GQ G + I P C +S+ + + +E + GL
Sbjct: 2 LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGDHSVFLLEDGEVYTCGLN 61
Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
GQLGH + E N +P I ALA E IV VACG +H++A+ +G +
Sbjct: 62 TKGQLGH--EREGN--------------KPEQIGALADEHIVHVACGESHSLALSDRGQL 105
Query: 251 YTWGFGGYGRLGHREQKDEW-VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
++WG G G+LG ++ VPR + + +L +S G+ + A GQ + W
Sbjct: 106 FSWGAGSDGQLGLMTTEESVAVPRLIQKLNQQTILQ----VSCGNWHCLALAADGQFFTW 161
Query: 310 GKLKNN----GDDW---MYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGE 361
GK + G ++ P+ + L G L + +G H F + S + WG G+
Sbjct: 162 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQ 221
Query: 362 LGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
LG + S P V +L V+ ++CG H+ V+
Sbjct: 222 LGLSDEEDRES--PCHVKLLRAQKVVYISCGEEHTAVL 257
>DICTYBASE|DDB_G0282575 [details] [associations]
symbol:DDB_G0282575 "putative GTPase activating
protein (GAP)" species:44689 "Dictyostelium discoideum" [GO:0032851
"positive regulation of Rab GTPase activity" evidence=IEA]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005097 "Rab GTPase
activator activity" evidence=IEA] InterPro:IPR000195 Pfam:PF00566
PROSITE:PS50086 SMART:SM00164 dictyBase:DDB_G0282575
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AAFI02000047 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5210
GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923 RefSeq:XP_640136.1
ProteinModelPortal:Q54SA3 EnsemblProtists:DDB0235329 GeneID:8623673
KEGG:ddi:DDB_G0282575 InParanoid:Q54SA3 OMA:NIVFRIW Uniprot:Q54SA3
Length = 1194
Score = 144 (55.7 bits), Expect = 7.9e-19, Sum P(3) = 7.9e-19
Identities = 51/197 (25%), Positives = 87/197 (44%)
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
L+FG + G I NE++ + ++ +CG++ + LS + + + G +
Sbjct: 340 LSFGGSNDNNFLGGVINNELQMMTDQMNSIKIIQISCGSNHILALS--DQYHVYSWGSAE 397
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALA--GETIVKVACGTNHTVAVDSKGY 249
+G+LGHG D Y+ + + P+ I +L G T++ V+ G +H +A+
Sbjct: 398 HGKLGHGED--YSFVSQNPRWINS----PKKIKSLQEKGVTVISVSSGYSHCMALTLDSG 451
Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVD-VFQRNNVLPPEAVISAGSVNSS-CTAGGGQLY 307
+ TWG G G+LG + D W P + V +N + I G NS T +LY
Sbjct: 452 ILTWGKGSDGQLGTGFRHDIWSPFEIKRVIDKNEKI---VQICCGYFNSFFITLEKRELY 508
Query: 308 M--WGKLKNNGDDWMYP 322
W DD + P
Sbjct: 509 QFGWSIPLGKSDDILIP 525
Score = 132 (51.5 bits), Expect = 7.9e-19, Sum P(3) = 7.9e-19
Identities = 40/127 (31%), Positives = 59/127 (46%)
Query: 34 GRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGR-NERGQLGH 92
GR D +++ P + L +I V C S H + + G Y+WG N GQLGH
Sbjct: 16 GRGVNQGDKHIIEPIEVPELNKKNI--VQLSCGSTHTLVLSDSGDLYSWGSSNSSGQLGH 73
Query: 93 GD-KIQRDRP------TIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG 145
GD K Q +P +++ LS + + G T V+T+ G+ +G N GQL G
Sbjct: 74 GDSKNQYGKPKNIKKFSLIKALSGDSVIQVSTGLDFTFVLTDQGSIYNWGSNIEGQLALG 133
Query: 146 SIRNEIE 152
N+ E
Sbjct: 134 QPVNKNE 140
Score = 129 (50.5 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 45/140 (32%), Positives = 70/140 (50%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW-NK 138
+ WGR + GDK P V EL+K I + G +HT+V+++ G+ ++G N
Sbjct: 13 FYWGRG----VNQGDK-HIIEPIEVPELNKKNIVQLSCGSTHTLVLSDSGDLYSWGSSNS 67
Query: 139 HGQLGSGSIRNEI-EP------SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLP 190
GQLG G +N+ +P S ++ L + V + G DFT L+ +G SI N G
Sbjct: 68 SGQLGHGDSKNQYGKPKNIKKFSLIKALSGDSVIQVSTGLDFTFVLTD-QG-SIYNWGSN 125
Query: 191 QYGQLGHGTDNEYNTKDSSV 210
GQL G N K++++
Sbjct: 126 IEGQLALGQPVNKNEKENNI 145
Score = 128 (50.1 bits), Expect = 6.5e-08, Sum P(2) = 6.5e-08
Identities = 38/145 (26%), Positives = 68/145 (46%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ--RDRPTIVSELSKYK-IKK 114
I+ + C S H +A+ + Y+WG E G+LGHG+ P ++ K K +++
Sbjct: 369 IKIIQISCGSNHILALSDQYHVYSWGSAEHGKLGHGEDYSFVSQNPRWINSPKKIKSLQE 428
Query: 115 AG-------AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEI-EPSPVRCLVSE---V 163
G +G SH + +T D L +G GQLG+G R++I P ++ ++ + +
Sbjct: 429 KGVTVISVSSGYSHCMALTLDSGILTWGKGSDGQLGTG-FRHDIWSPFEIKRVIDKNEKI 487
Query: 164 TATACGADFTVWLSSVEGASILNAG 188
CG F + ++E + G
Sbjct: 488 VQICCGY-FNSFFITLEKRELYQFG 511
Score = 114 (45.2 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 41/141 (29%), Positives = 68/141 (48%)
Query: 134 FGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQY 192
F W + G I IEP V L + + +CG+ T+ LS + + + G
Sbjct: 13 FYWGRGVNQGDKHI---IEPIEVPELNKKNIVQLSCGSTHTLVLS--DSGDLYSWGSSNS 67
Query: 193 -GQLGHG-TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
GQLGHG + N+Y K ++K + I AL+G+++++V+ G + T + +G +
Sbjct: 68 SGQLGHGDSKNQYG-KPKNIK-------KFSLIKALSGDSVIQVSTGLDFTFVLTDQGSI 119
Query: 251 YTWGFGGYGRL--GHREQKDE 269
Y WG G+L G K+E
Sbjct: 120 YNWGSNIEGQLALGQPVNKNE 140
Score = 79 (32.9 bits), Expect = 7.9e-19, Sum P(3) = 7.9e-19
Identities = 25/84 (29%), Positives = 39/84 (46%)
Query: 333 LRCMDSGNMHHFV-GADSSCISWGHAQYGELGYGPYGQ----KSSAM--PKKVDILEGMH 385
++ + SG H + + C+S G ++G+LG P K S + P + L
Sbjct: 566 IKQISSGYSHTLILNENGECLSIGQGEFGQLGI-PLDHSSIDKDSFVNYPTVIPALLPYF 624
Query: 386 VISVACGYGHSLVIVDRTNVGERL 409
V SV CG HS+ IV N+ + L
Sbjct: 625 VESVQCGRWHSVAIVSNRNLRDHL 648
Score = 74 (31.1 bits), Expect = 7.7e-08, Sum P(2) = 7.7e-08
Identities = 32/115 (27%), Positives = 48/115 (41%)
Query: 289 VISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMY-PKPLMDLS--GWNLRCMDSGNMHHF- 344
V S GS G G+ Y + + N W+ PK + L G + + SG H
Sbjct: 390 VYSWGSAEHG-KLGHGEDYSF--VSQN-PRWINSPKKIKSLQEKGVTVISVSSGYSHCMA 445
Query: 345 VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+ DS ++WG G+LG G S K I + ++ + CGY +S I
Sbjct: 446 LTLDSGILTWGKGSDGQLGTGFRHDIWSPFEIKRVIDKNEKIVQICCGYFNSFFI 500
Score = 73 (30.8 bits), Expect = 9.8e-08, Sum P(2) = 9.8e-08
Identities = 27/86 (31%), Positives = 39/86 (45%)
Query: 161 SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
+ + + G T+ L+ E L+ G ++GQLG D+ KDS V Y P
Sbjct: 564 NRIKQISSGYSHTLILN--ENGECLSIGQGEFGQLGIPLDHSSIDKDSFVN--Y-----P 614
Query: 221 RAIAALAGETIVKVACGTNHTVAVDS 246
I AL + V CG H+VA+ S
Sbjct: 615 TVIPALLPYFVESVQCGRWHSVAIVS 640
Score = 53 (23.7 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 10/32 (31%), Positives = 20/32 (62%)
Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
I +++ G +HT+ ++ G + G G +G+LG
Sbjct: 566 IKQISSGYSHTLILNENGECLSIGQGEFGQLG 597
Score = 50 (22.7 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 9/38 (23%), Positives = 20/38 (52%)
Query: 368 GQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
G ++ + D + + +I ++CG H L + D+ +V
Sbjct: 353 GVINNELQMMTDQMNSIKIIQISCGSNHILALSDQYHV 390
>UNIPROTKB|E2RMB0 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:8916 KO:K10614 OMA:SPAVDFR
EMBL:AAEX03016754 EMBL:AAEX03016753 RefSeq:XP_535653.3
Ensembl:ENSCAFT00000015540 GeneID:478475 KEGG:cfa:478475
Uniprot:E2RMB0
Length = 1050
Score = 254 (94.5 bits), Expect = 9.1e-19, P = 9.1e-19
Identities = 63/201 (31%), Positives = 96/201 (47%)
Query: 65 CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI-QRDRPTIVSELSKYKIKKAGAGRSHTV 123
C + HC+A+ +G+ +TWG+N GQLG G + + P V L + + AG +H+
Sbjct: 144 CGNWHCLALAADGQFFTWGKNSHGQLGLGKEYPSQASPQRVRSLEGIPLAQVAAGGAHSF 203
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVWLSSVEGA 182
++ G +G N GQLG + P V+ L +V +CG + T L+ G
Sbjct: 204 ALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 263
Query: 183 SILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTV 242
AG GQLGH + N+ + PR + L G + ++ACG HT+
Sbjct: 264 FTFGAG--SCGQLGHDSMND--------------EVNPRRVLELMGSEVTQIACGRQHTL 307
Query: 243 A-VDSKGYVYTWGFGGYGRLG 262
A V S G +Y +G G G+LG
Sbjct: 308 AFVPSSGLIYAFGCGAKGQLG 328
Score = 238 (88.8 bits), Expect = 6.8e-17, P = 6.8e-17
Identities = 73/208 (35%), Positives = 99/208 (47%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
SP R+R L G+ + VAAG H A+ + G + WG N GQLG D+ R+ P V
Sbjct: 180 SPQRVRSLEGIPLAQVAAG--GAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVK 237
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L K+ G HT V+T+ G FG GQLG S+ +E+ P V L+ SEVT
Sbjct: 238 LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVT 297
Query: 165 ATACGADFTVWLSSVEGASILNA-GLPQYGQLGHGTDNEYNTK-DSSVK---LAYEAQPR 219
ACG T L+ V + ++ A G GQLG G + N K S VK A+ Q
Sbjct: 298 QIACGRQHT--LAFVPSSGLIYAFGCGAKGQLGTG--HTCNVKCPSPVKGYWAAHSGQLS 353
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSK 247
RA + ++ G + T + SK
Sbjct: 354 ARA-DRFKYHIVKQIFSGGDQTFVLCSK 380
Score = 234 (87.4 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 69/224 (30%), Positives = 100/224 (44%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG---HGDKIQRDRPTIVSELSKYKIK 113
D V C H +A+ G+ ++WG GQLG D + P ++ +L++ I
Sbjct: 83 DQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAV--PRLIQKLNQQTIL 140
Query: 114 KAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSPVRCLVS-EVTATACGAD 171
+ G H + + DG +G N HGQLG G ++ P VR L + A G
Sbjct: 141 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEYPSQASPQRVRSLEGIPLAQVAAGGA 200
Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
+ LS + GA + G+ GQLG +D E VKL L + +
Sbjct: 201 HSFALS-LSGA-VFGWGMNNAGQLGL-SDEEDRESPCHVKL-------------LRTQKV 244
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
V ++CG HT + G V+T+G G G+LGH DE PRRV
Sbjct: 245 VYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288
Score = 225 (84.3 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 75/278 (26%), Positives = 121/278 (43%)
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRC-LVSEVTATACGADFTVWLSSVEGASILNAGLP 190
L +G+ GQ G + I P C +S+ + + +E + GL
Sbjct: 2 LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61
Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
GQLGH + E N +P I ALA + IV VACG +H++A+ +G +
Sbjct: 62 TKGQLGH--EREGN--------------KPEQIGALADQHIVHVACGESHSLALSDRGQL 105
Query: 251 YTWGFGGYGRLGHREQKDEW-VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
++WG G G+LG +D VPR + + +L +S G+ + A GQ + W
Sbjct: 106 FSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQ----VSCGNWHCLALAADGQFFTW 161
Query: 310 GKLKNN----GDDW---MYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGE 361
GK + G ++ P+ + L G L + +G H F + S + WG G+
Sbjct: 162 GKNSHGQLGLGKEYPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQ 221
Query: 362 LGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
LG + S P V +L V+ ++CG H+ V+
Sbjct: 222 LGLSDEEDRES--PCHVKLLRTQKVVYISCGEEHTAVL 257
Score = 224 (83.9 bits), Expect = 2.7e-15, P = 2.7e-15
Identities = 91/327 (27%), Positives = 144/327 (44%)
Query: 82 WGRNERGQLGHGDKIQR--DRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
WG GQ G +Q P + +S +K+ G +H+V + EDG G N
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
GQLG N+ P + L + + ACG ++ LS + + + G GQLG
Sbjct: 64 GQLGHEREGNK--PEQIGALADQHIVHVACGESHSLALS--DRGQLFSWGAGSDGQLGLM 119
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
T T+DS +A PR I L +TI++V+CG H +A+ + G +TWG +
Sbjct: 120 T-----TEDS---VAV-----PRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSH 166
Query: 259 GRLG-HREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAG--GGQLYMWGKLK-N 314
G+LG +E + P+RV + L A A S S + G + G+L +
Sbjct: 167 GQLGLGKEYPSQASPQRVRSLE-GIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLS 225
Query: 315 NGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSA 373
+ +D P + L + + G H V S + ++G G+LG+ + +
Sbjct: 226 DEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN- 284
Query: 374 MPKKVDILEGMHVISVACGYGHSLVIV 400
P++V L G V +ACG H+L V
Sbjct: 285 -PRRVLELMGSEVTQIACGRQHTLAFV 310
>TAIR|locus:2165770 [details] [associations]
symbol:AT5G42140 "AT5G42140" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005576
"extracellular region" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=ISS] [GO:0008536 "Ran GTPase binding" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007165 "signal
transduction" evidence=ISS] [GO:0035091 "phosphatidylinositol
binding" evidence=ISS] InterPro:IPR000306 Pfam:PF01363
SMART:SM00064 INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0046872 EMBL:AB017067 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.30.40.10 InterPro:IPR017455
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 InterPro:IPR013591 Pfam:PF08381 PROSITE:PS51514
HSSP:Q15075 ProtClustDB:CLSN2686442 IPI:IPI00533393
RefSeq:NP_199029.1 UniGene:At.28039 ProteinModelPortal:Q9FHX1
SMR:Q9FHX1 PRIDE:Q9FHX1 EnsemblPlants:AT5G42140.1 GeneID:834219
KEGG:ath:AT5G42140 TAIR:At5g42140 HOGENOM:HOG000240974
InParanoid:Q9FHX1 OMA:RNEVFTW PhylomeDB:Q9FHX1
Genevestigator:Q9FHX1 Uniprot:Q9FHX1
Length = 1073
Score = 254 (94.5 bits), Expect = 9.4e-19, P = 9.4e-19
Identities = 99/379 (26%), Positives = 156/379 (41%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
+++ P L V +D+ +A G H V +G +TWG G+LGHG P
Sbjct: 259 DVLIPKPLESNVVLDVHHIACGVK--HAALVSRQGEVFTWGEASGGRLGHGMGKDVTGPQ 316
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPSPVRCLV 160
++ L+ I G HT VT G +G H G LG G+ + P + +
Sbjct: 317 LIESLAATSIDFVACGEFHTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHWIPKRISGPL 376
Query: 161 S--EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP 218
++ + +CG T ++S + G +G LGHG D E + Y
Sbjct: 377 EGLQIASVSCGPWHTALITST--GQLFTFGDGTFGVLGHG-DKE--------TVFY---- 421
Query: 219 RPRAIAALAGETIVKVACGTNHTVAVD-----------SKGYVYTWGFGGYGRLGHREQK 267
PR + +L+G + VACG H A+ S G ++TWG G RLGH +++
Sbjct: 422 -PREVESLSGLRTIAVACGVWHAAAIVEVIVTHSSSSVSSGKLFTWGDGDKSRLGHGDKE 480
Query: 268 DEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY-----MWGKLKNNGDDWMYP 322
P V + V S+ T G ++Y ++G+L N D P
Sbjct: 481 PRLKPTCVSALIDHTF---HRVACGHSLTVGLTTSG-KVYTMGSTVYGQLGNPNADGKLP 536
Query: 323 KPLMD-LSGWNLRCMDSGNMHHFV-GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
+ D L+ + + G H V + + +WG G LG+G + + P VD
Sbjct: 537 CLVEDKLTKDCVEEIACGAYHVAVLTSRNEVFTWGKGANGRLGHGDVEDRKA--PTLVDA 594
Query: 381 LEGMHVISVACGYGHSLVI 399
L+ HV ++ACG + I
Sbjct: 595 LKERHVKNIACGSNFTAAI 613
Score = 243 (90.6 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 87/295 (29%), Positives = 127/295 (43%)
Query: 30 W-DAVGRRKG-ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWG--RN 85
W +A G R G + ++ P + L I FVA G H AV + G YTWG +
Sbjct: 296 WGEASGGRLGHGMGKDVTGPQLIESLAATSIDFVACG--EFHTCAVTMTGEIYTWGDGTH 353
Query: 86 ERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGS 144
G LGHG + P +S L +I G HT ++T G FG G LG
Sbjct: 354 NAGLLGHGTDVSHWIPKRISGPLEGLQIASVSCGPWHTALITSTGQLFTFGDGTFGVLGH 413
Query: 145 GSIRNEIEPSPVRCLVSEVT-ATACGADFTVWLSS--VEGASILNAGLPQYGQLGHGTDN 201
G P V L T A ACG VW ++ VE ++ G+L D
Sbjct: 414 GDKETVFYPREVESLSGLRTIAVACG----VWHAAAIVEVIVTHSSSSVSSGKLFTWGDG 469
Query: 202 EYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRL 261
+ + K E + +P ++AL T +VACG + TV + + G VYT G YG+L
Sbjct: 470 DKSRLGHGDK---EPRLKPTCVSALIDHTFHRVACGHSLTVGLTTSGKVYTMGSTVYGQL 526
Query: 262 GHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGKLKN 314
G+ D +P V+ + L + V I+ G+ + + +++ WGK N
Sbjct: 527 GN-PNADGKLPCLVE-----DKLTKDCVEEIACGAYHVAVLTSRNEVFTWGKGAN 575
Score = 197 (74.4 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 50/179 (27%), Positives = 85/179 (47%)
Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG 293
+ACG H V +G V+TWG GRLGH KD P+ ++ ++ ++ G
Sbjct: 277 IACGVKHAALVSRQGEVFTWGEASGGRLGHGMGKDVTGPQLIESLAATSI----DFVACG 332
Query: 294 SVNSSCTAGGGQLYMWGK------LKNNGDD---WMYPKPLMD-LSGWNLRCMDSGNMHH 343
++ G++Y WG L +G D W+ PK + L G + + G H
Sbjct: 333 EFHTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHWI-PKRISGPLEGLQIASVSCGPWHT 391
Query: 344 -FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
+ + ++G +G LG+G +++ P++V+ L G+ I+VACG H+ IV+
Sbjct: 392 ALITSTGQLFTFGDGTFGVLGHGD--KETVFYPREVESLSGLRTIAVACGVWHAAAIVE 448
Score = 188 (71.2 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 81/306 (26%), Positives = 123/306 (40%)
Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWL 176
G H +V+ G +G G+LG G ++ P + L + + ACG T +
Sbjct: 280 GVKHAALVSRQGEVFTWGEASGGRLGHGMGKDVTGPQLIESLAATSIDFVACGEFHTCAV 339
Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC 236
+ G G LGHGTD + P+ R L G I V+C
Sbjct: 340 TMTGEIYTWGDGTHNAGLLGHGTDVSHWI------------PK-RISGPLEGLQIASVSC 386
Query: 237 GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ--RN-----NVLPPEAV 289
G HT + S G ++T+G G +G LGH +++ + PR V+ R V A+
Sbjct: 387 GPWHTALITSTGQLFTFGDGTFGVLGHGDKETVFYPREVESLSGLRTIAVACGVWHAAAI 446
Query: 290 ISAGSVNSSCTAGGGQLYMWG---KLK-NNGDDWMYPKP-----LMDLSGWNLRCMDSGN 340
+ +SS + G+L+ WG K + +GD KP L+D + + C S
Sbjct: 447 VEVIVTHSSSSVSSGKLFTWGDGDKSRLGHGDKEPRLKPTCVSALIDHTFHRVACGHSLT 506
Query: 341 MHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV-DILEGMHVISVACGYGHSLVI 399
+ + + G YG+LG P +P V D L V +ACG H V+
Sbjct: 507 VG--LTTSGKVYTMGSTVYGQLG-NP--NADGKLPCLVEDKLTKDCVEEIACGAYHVAVL 561
Query: 400 VDRTNV 405
R V
Sbjct: 562 TSRNEV 567
>UNIPROTKB|E2R5W9 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 OMA:ERPGAWF GeneTree:ENSGT00700000104312
EMBL:AAEX03002330 EMBL:AAEX03002329 Ensembl:ENSCAFT00000035362
Uniprot:E2R5W9
Length = 313
Score = 149 (57.5 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 29/89 (32%), Positives = 47/89 (52%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H + +D G+ ++WG+ GQLGHG P ++ L + + AG H+V V+E
Sbjct: 106 HALLLDEAGQVFSWGQGRHGQLGHGSLEAEPEPRLLEALQGLPVAEVAAGGWHSVCVSET 165
Query: 129 GNSLAFGWNKHGQLG--SGSIRNEIEPSP 155
G+ +GWN+ GQL S S+ + + P
Sbjct: 166 GDIYIWGWNESGQLALPSRSLAEDTKTIP 194
Score = 148 (57.2 bits), Expect = 9.9e-08, P = 9.9e-08
Identities = 55/186 (29%), Positives = 81/186 (43%)
Query: 129 GNSLAFGWNKHGQL-GSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
G+ FG+ GQ GSG R + P P++ GAD +S +++
Sbjct: 7 GSWFGFGFCGFGQAPGSGRGRQVLSPEPLQ-------TPGSGADVRRVSASWSYTALVTR 59
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP--RPRAIAALAGETIVK-VACGTNHTVAV 244
P L G V A QP RP A ALA E + + G H + +
Sbjct: 60 ERPPPALLRPGP---------RVPGAKAPQPALRPPAPRALAPELRARRLELGAEHALLL 110
Query: 245 DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
D G V++WG G +G+LGH + E PR ++ Q P A ++AG +S C + G
Sbjct: 111 DEAGQVFSWGQGRHGQLGHGSLEAEPEPRLLEALQGL----PVAEVAAGGWHSVCVSETG 166
Query: 305 QLYMWG 310
+Y+WG
Sbjct: 167 DIYIWG 172
Score = 144 (55.7 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 55/195 (28%), Positives = 83/195 (42%)
Query: 217 QP--RPRAIAALAGETIVK-VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
QP RP A ALA E + + G H + +D G V++WG G +G+LGH + E PR
Sbjct: 80 QPALRPPAPRALAPELRARRLELGAEHALLLDEAGQVFSWGQGRHGQLGHGSLEAEPEPR 139
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNL 333
++ Q P A ++AG +S C + G +Y+WG N P + +
Sbjct: 140 LLEALQGL----PVAEVAAGGWHSVCVSETGDIYIWGW--NESGQLALPSRSLAEDTKTI 193
Query: 334 RCMDSGNMHHFVGADSSCISWGHAQYGELGY-GPYGQKSSAMPKKVDILEGMHVISVACG 392
SG + D + GE G P+ P +D+ G V+ +CG
Sbjct: 194 PREASG-----LNEDGFEVR--RTAKGEDGAPAPF-IAIQPFPALLDLPLGADVVKASCG 245
Query: 393 YGHSLVIVDRTNVGE 407
H+ V+ T GE
Sbjct: 246 SRHTAVV---TGTGE 257
Score = 141 (54.7 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 32/81 (39%), Positives = 44/81 (54%)
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
QP P + G +VK +CG+ HT V G +YTWG+G YG+LGH++ P RV+
Sbjct: 225 QPFPALLDLPLGADVVKASCGSRHTAVVTGTGELYTWGWGKYGQLGHKDTTSLDRPCRVE 284
Query: 277 VFQRNNVLPPEAVISAGSVNS 297
F + L AV S G N+
Sbjct: 285 YFV-DKQLQVRAV-SCGPWNT 303
Score = 137 (53.3 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 47/173 (27%), Positives = 77/173 (44%)
Query: 91 GHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNE 150
G G ++ P + + S +++ A S+T +VT + A G+ + +
Sbjct: 24 GRGRQVLSPEP-LQTPGSGADVRRVSASWSYTALVTRERPPPALLRPGPRVPGAKAPQPA 82
Query: 151 IEPSPVRCLVSEVTATAC--GADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
+ P R L E+ A GA+ + L E + + G ++GQLGHG+
Sbjct: 83 LRPPAPRALAPELRARRLELGAEHALLLD--EAGQVFSWGQGRHGQLGHGS--------- 131
Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRL 261
EA+P PR + AL G + +VA G H+V V G +Y WG+ G+L
Sbjct: 132 -----LEAEPEPRLLEALQGLPVAEVAAGGWHSVCVSETGDIYIWGWNESGQL 179
Score = 118 (46.6 bits), Expect = 0.00025, P = 0.00025
Identities = 50/186 (26%), Positives = 81/186 (43%)
Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
EA+P PR + AL G + +VA G H+V V G +Y WG+ G+L +P R
Sbjct: 133 EAEPEPRLLEALQGLPVAEVAAGGWHSVCVSETGDIYIWGWNESGQLA--------LPSR 184
Query: 275 VDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDD---WMYPKP-LMDLS- 329
+ + +P EA S G ++ K ++ + P P L+DL
Sbjct: 185 -SLAEDTKTIPREA--------SGLNEDGFEVRRTAKGEDGAPAPFIAIQPFPALLDLPL 235
Query: 330 GWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDIL--EGMHV 386
G ++ G+ H V +WG +YG+LG+ S P +V+ + + V
Sbjct: 236 GADVVKASCGSRHTAVVTGTGELYTWGWGKYGQLGHKD--TTSLDRPCRVEYFVDKQLQV 293
Query: 387 ISVACG 392
+V+CG
Sbjct: 294 RAVSCG 299
Score = 100 (40.3 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 25/72 (34%), Positives = 35/72 (48%)
Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS---EVTATAC 168
+ KA G HT VVT G +GW K+GQLG + P V V +V A +C
Sbjct: 239 VVKASCGSRHTAVVTGTGELYTWGWGKYGQLGHKDTTSLDRPCRVEYFVDKQLQVRAVSC 298
Query: 169 GADFTVWLSSVE 180
G + ++ +VE
Sbjct: 299 GP-WNTYVYAVE 309
Score = 88 (36.0 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 27/72 (37%), Positives = 33/72 (45%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDK-I 96
G+L+ P L L G+ + VAAG H V V G Y WG NE GQL + +
Sbjct: 130 GSLEAE-PEPRLLEALQGLPVAEVAAG--GWHSVCVSETGDIYIWGWNESGQLALPSRSL 186
Query: 97 QRDRPTIVSELS 108
D TI E S
Sbjct: 187 AEDTKTIPREAS 198
>RGD|1306366 [details] [associations]
symbol:Herc1 "HECT and RLD domain containing E3 ubiquitin
protein ligase family member 1" species:10116 "Rattus norvegicus"
[GO:0010507 "negative regulation of autophagy" evidence=ISO]
[GO:0021702 "cerebellar Purkinje cell differentiation"
evidence=ISO] [GO:0031175 "neuron projection development"
evidence=ISO] [GO:0050885 "neuromuscular process controlling
balance" evidence=ISO] RGD:1306366 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 OrthoDB:EOG40GCPW
GeneTree:ENSGT00700000104312 IPI:IPI00765979
Ensembl:ENSRNOT00000049300 UCSC:RGD:1306366 Uniprot:D3Z9N9
Length = 1203
Score = 249 (92.7 bits), Expect = 4.3e-18, P = 4.3e-18
Identities = 87/365 (23%), Positives = 153/365 (41%)
Query: 44 LVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD---R 100
++ P +L P D + + AG C V + +G G+ G+LG GD + +
Sbjct: 393 ILQP-KLAPSFS-DAQTIEAGQY-CTFV-ISTDGSVRACGKGSYGRLGLGDSNNQSTLKK 448
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
T S K+ + HT+ T +G ++G +G+LG G+ + P ++ +
Sbjct: 449 LTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPL 508
Query: 161 SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
A + + E + G +G+LGHG N N P
Sbjct: 509 QGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNI--------------P 554
Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG--YGRLGHREQKDEWVPRRVDVF 278
+ ++ + +V+CG++HT+A+ G W FGG G+LGH + + P+ ++
Sbjct: 555 TLVKDISN--VGEVSCGSSHTIALSKDGRT-VWSFGGGDNGKLGHGDTNRVYKPKVIEAL 611
Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG--KLKNNGDDW---MYPKPLMDLSGWNL 333
Q + + AGS +S GQ+Y WG G + PK + +L+ +
Sbjct: 612 QGMFIRK----VCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEELAATRI 667
Query: 334 RCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
+ G+ H + D+ +WG+ G+ G G PKKV L+G+ + ++ G
Sbjct: 668 VDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGN-STGPITKPKKVSGLDGIAIQQISAG 726
Query: 393 YGHSL 397
HSL
Sbjct: 727 TSHSL 731
Score = 244 (91.0 bits), Expect = 6.9e-17, Sum P(2) = 6.9e-17
Identities = 79/300 (26%), Positives = 127/300 (42%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKA-GAGRSHTVVVTE 127
H +A EG ++WG + G+LGHG+ + P ++ + K+ AG H+ VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
DG +G G+LG G + P+ V+ +S V +CG+ T+ LS +G ++ +
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G G+LGHG N Y +P+ I AL G I KV G+ ++A+ S
Sbjct: 587 GGGDNGKLGHGDTNR----------VY----KPKVIEALQGMFIRKVCAGSQSSLALTST 632
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP----PEAVISAGSVNSSCTAGG 303
G VY WG G G E P+ ++ ++ +S N G
Sbjct: 633 GQVYAWGCGACLGCGSSEAT-ALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGN 691
Query: 304 GQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGA----DSSCISWGHAQY 359
+ G+ + G PK + L G ++ + +G H D ++W H Y
Sbjct: 692 NSMGQCGQGNSTGPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW-HRPY 749
Score = 237 (88.5 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 91/334 (27%), Positives = 153/334 (45%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
Y WG N QL G + + +P + S + +AG + T V++ DG+ A G +
Sbjct: 375 YVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAG--QYCTFVISTDGSVRACGKGSY 432
Query: 140 GQLGSGSIRNE-----IEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
G+LG G N+ + P R + +V+++ G+D + EG + + G YG+
Sbjct: 433 GRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSSK-GSDGHTLAFTTEG-EVFSWGDGDYGK 489
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTW 253
LGHG +SS Q P+ I L G+ +V V+ G H+ AV G +YTW
Sbjct: 490 LGHG--------NSST------QKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTW 535
Query: 254 GFGGYGRLGHREQKDEWVPRRV-DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW--- 309
G G +GRLGH + +P V D+ +NV +S GS ++ + G+ +W
Sbjct: 536 GEGDFGRLGHGDSNSRNIPTLVKDI---SNV----GEVSCGSSHTIALSKDGRT-VWSFG 587
Query: 310 ----GKLKNNGDDWMY-PKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELG 363
GKL + + +Y PK + L G +R + +G+ + + +WG LG
Sbjct: 588 GGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LG 645
Query: 364 YGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G + ++ PK ++ L ++ ++ G H L
Sbjct: 646 CGS-SEATALRPKLIEELAATRIVDISIGDSHCL 678
Score = 208 (78.3 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 78/290 (26%), Positives = 129/290 (44%)
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
+V+E +G N QL G+ ++P T A + ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423
Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
+ G YG+LG G N +T KL +E P R+I ++ K + G HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFE--PH-RSIKKVSSS---KGSDG--HTLA 472
Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
++G V++WG G YG+LGH + P+ + + V+ +SAG +S+
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529
Query: 304 GQLYMWGK----LKNNGDDWM--YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWG 355
G+LY WG+ +GD P + D+S N+ + G+ H + D + S+G
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFG 587
Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
G+LG+G + PK ++ L+GM + V G SL + V
Sbjct: 588 GGDNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLALTSTGQV 635
Score = 38 (18.4 bits), Expect = 6.9e-17, Sum P(2) = 6.9e-17
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 347 ADSSCISWGHAQYGELGYGPYGQKS 371
AD S + G YG L PYG ++
Sbjct: 912 ADLSTVCMG---YGNLSDQPYGPQT 933
>TAIR|locus:2090136 [details] [associations]
symbol:AT3G15430 "AT3G15430" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] [GO:0006486 "protein glycosylation" evidence=RCA]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002686 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 EMBL:AB022218 EMBL:AC024081 HSSP:P18754
EMBL:AY150379 IPI:IPI00535822 RefSeq:NP_566512.1 RefSeq:NP_974323.1
UniGene:At.24353 ProteinModelPortal:Q9LDU3 SMR:Q9LDU3 IntAct:Q9LDU3
EnsemblPlants:AT3G15430.1 EnsemblPlants:AT3G15430.2 GeneID:820782
KEGG:ath:AT3G15430 TAIR:At3g15430 InParanoid:Q9LDU3 OMA:GDNERAQ
PhylomeDB:Q9LDU3 ProtClustDB:CLSN2688406 Genevestigator:Q9LDU3
Uniprot:Q9LDU3
Length = 488
Score = 241 (89.9 bits), Expect = 6.8e-18, P = 6.8e-18
Identities = 92/349 (26%), Positives = 156/349 (44%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKI-QRDRPTIVSELSKYKIKKAGAGRSHTVVVTE 127
H + ++ + Y+ G + G L HG + Q T + ++ + A ++H+ V +
Sbjct: 122 HTLLIN-NSKVYSCGVSLSGVLAHGSETTQCVAFTPIEFPFPAQVAQVSATQNHSAFVLQ 180
Query: 128 DGNSLAFGWNKHGQLGS-GSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASIL 185
G L G N G + R P V L + A G FTV+LS EG +
Sbjct: 181 SGQVLTCGDNSSHCCGHLDTSRPIFRPKLVEALKGTPCKQVAAGLHFTVFLSR-EGHAY- 238
Query: 186 NAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAG-ETIVKVACGTNHTVAV 244
G +GQLGHG +T D +P P+ + L +V++A G ++ +AV
Sbjct: 239 TCGSNTHGQLGHG-----DTLD---------RPVPKVVEFLKTIGPVVQIAAGPSYVLAV 284
Query: 245 DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
G VY++G G LGH EQ+DE PR + F+R + +SAG ++ G
Sbjct: 285 TQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILR--VSAGDEHAVALDSNG 342
Query: 305 QLYMWGK----LKNNGD--DWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHA 357
++Y WGK +GD D + P+ L++L+ + + FV + + +G
Sbjct: 343 RVYTWGKGYCGALGHGDENDKITPQVLVNLNNCLAVQVCARKRKTFVLVEGGLLYGFGWM 402
Query: 358 QYGELGYGPYGQKSSAM-PKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
+G LG+ G + P+ ++ L+ V V+ G H++V+ R +
Sbjct: 403 GFGSLGFPDRGVSDKVLRPRVLECLKPHRVSQVSTGLYHTIVVTQRGRI 451
Score = 170 (64.9 bits), Expect = 8.9e-10, P = 8.9e-10
Identities = 60/243 (24%), Positives = 102/243 (41%)
Query: 25 CGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGR 84
CGS +G LD + +G ++ +AAG + +AV +G Y++G
Sbjct: 240 CGSNTHGQLGHGD-TLDRPVPKVVEFLKTIGPVVQ-IAAG--PSYVLAVTQDGSVYSFGS 295
Query: 85 NERGQLGHGDKIQRDRPTIVSELSK--YKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--G 140
LGHG++ +P ++ + I + AG H V + D N + W K G
Sbjct: 296 GSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVAL--DSNGRVYTWGKGYCG 353
Query: 141 QLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTD 200
LG G ++I P + L + + C ++ VEG + G +G LG
Sbjct: 354 ALGHGDENDKITPQVLVNLNNCLAVQVCARKRKTFVL-VEGGLLYGFGWMGFGSLG---- 408
Query: 201 NEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGR 260
+ + S K+ RPR + L + +V+ G HT+ V +G ++ +G +
Sbjct: 409 --FPDRGVSDKVL-----RPRVLECLKPHRVSQVSTGLYHTIVVTQRGRIFGFGDNERAQ 461
Query: 261 LGH 263
LGH
Sbjct: 462 LGH 464
Score = 123 (48.4 bits), Expect = 0.00015, P = 0.00015
Identities = 40/125 (32%), Positives = 60/125 (48%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAG--CVSCHCVAVDVEGRC-YTWGRNERGQLGHGD 94
GAL G+ ++ P V V++ A C V VEG Y +G G LG D
Sbjct: 353 GAL-GHGDENDKITPQVLVNLNNCLAVQVCARKRKTFVLVEGGLLYGFGWMGFGSLGFPD 411
Query: 95 KIQRD---RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEI 151
+ D RP ++ L +++ + G HT+VVT+ G FG N+ QLG S+R +
Sbjct: 412 RGVSDKVLRPRVLECLKPHRVSQVSTGLYHTIVVTQRGRIFGFGDNERAQLGHDSLRGCL 471
Query: 152 EPSPV 156
EP+ +
Sbjct: 472 EPTEI 476
>RGD|1306897 [details] [associations]
symbol:Nek8 "NIMA-related kinase 8" species:10116 "Rattus
norvegicus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0072372
"primary cilium" evidence=IEA;ISO] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 RGD:1306897 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372
PRINTS:PR00633 PROSITE:PS50012 EMBL:CH473948 KO:K08857
GeneTree:ENSGT00700000104137 CTD:284086 OrthoDB:EOG4PZJ65
IPI:IPI00369945 RefSeq:NP_001099274.1 UniGene:Rn.144705
Ensembl:ENSRNOT00000017264 GeneID:287473 KEGG:rno:287473
NextBio:626264 Uniprot:D3ZGQ5
Length = 698
Score = 244 (91.0 bits), Expect = 7.0e-18, P = 7.0e-18
Identities = 79/279 (28%), Positives = 125/279 (44%)
Query: 55 GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK 114
GV I+ VA G + C+ D G T+G G LGHG +PTIV L Y++ +
Sbjct: 396 GVTIKHVACGDLFTACLT-D-RGIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQ 453
Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFT 173
G SH + ++ DG A+G G+LG G+ + P V + E CG D +
Sbjct: 454 VACGASHVLALSADGELFAWGRGDGGRLGLGTRESHNCPQQVPMVPGQEAQRVVCGIDCS 513
Query: 174 VWLSSVEGASILNAGLPQYGQLGHG--TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
+ L+S +L G ++ +LG + E V+ A P A L ET+
Sbjct: 514 MILTSP--GRVLACGSNRFNKLGLDCLSLEEEPVPHQQVEEALSFTPL--GSAPLDRETL 569
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
+ V GT H+ AV + G YT+G +G+LG ++ P RV + ++ +++
Sbjct: 570 LCVDLGTAHSAAVTASGACYTFGSNQHGQLGTSSRRVSRAPCRVQGLEGIKMV----MVA 625
Query: 292 AGSVNSSCTAGGGQLYMWGK-----LKNNGDDWMYPKPL 325
G + G++Y WGK L +D P+P+
Sbjct: 626 CGDAFTVAIGAEGEVYSWGKGARGRLGRRDEDAGLPRPV 664
Score = 241 (89.9 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 72/248 (29%), Positives = 120/248 (48%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G+L ++ PT + L+G ++ V C + H +A+ +G + WGR + G+LG G +
Sbjct: 432 GSLT-DISQPTIVEALLGYEM--VQVACGASHVLALSADGELFAWGRGDGGRLGLGTRES 488
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
+ P V + + ++ G ++++T G LA G N+ +LG + E EP P +
Sbjct: 489 HNCPQQVPMVPGQEAQRVVCGIDCSMILTSPGRVLACGSNRFNKLGLDCLSLEEEPVPHQ 548
Query: 158 CLVSEVTATACGA---D----FTVWLSSVEGASILNAGLPQ-YGQLGHGTDNEYNTKDSS 209
+ ++ T G+ D V L + A++ +G +G HG + T
Sbjct: 549 QVEEALSFTPLGSAPLDRETLLCVDLGTAHSAAVTASGACYTFGSNQHG---QLGTSSRR 605
Query: 210 VKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDE 269
V A P + L G +V VACG TVA+ ++G VY+WG G GRLG R++ D
Sbjct: 606 VSRA------PCRVQGLEGIKMVMVACGDAFTVAIGAEGEVYSWGKGARGRLGRRDE-DA 658
Query: 270 WVPRRVDV 277
+PR V +
Sbjct: 659 GLPRPVQL 666
Score = 184 (69.8 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 88/315 (27%), Positives = 138/315 (43%)
Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPV---RCLVSEVTAT 166
++ + AGR+ VT G + + G G + +E P P R L + T
Sbjct: 339 EVVQVAAGRTQKAGVTRSGRLILWEAPPLGTGGGTLLPGAVELPQPQFVSRFLEGQSGVT 398
Query: 167 ----ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
ACG FT L+ G I+ G G LGHG+ D S +P
Sbjct: 399 IKHVACGDLFTACLTD-RGI-IMTFGSGSNGCLGHGS-----LTDIS---------QPTI 442
Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF---- 278
+ AL G +V+VACG +H +A+ + G ++ WG G GRLG ++ P++V +
Sbjct: 443 VEALLGYEMVQVACGASHVLALSADGELFAWGRGDGGRLGLGTRESHNCPQQVPMVPGQE 502
Query: 279 -QR-------NNVLP-PEAVISAGSVNSSCTAGGGQLYMWGKL--KNNGDDWMYPKPL-- 325
QR + +L P V++ GS N G L + + ++ + PL
Sbjct: 503 AQRVVCGIDCSMILTSPGRVLACGS-NRFNKLGLDCLSLEEEPVPHQQVEEALSFTPLGS 561
Query: 326 MDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGM 384
L L C+D G H V A +C ++G Q+G+LG ++ S P +V LEG+
Sbjct: 562 APLDRETLLCVDLGTAHSAAVTASGACYTFGSNQHGQLGTS--SRRVSRAPCRVQGLEGI 619
Query: 385 HVISVACGYGHSLVI 399
++ VACG ++ I
Sbjct: 620 KMVMVACGDAFTVAI 634
>WB|WBGene00017195 [details] [associations]
symbol:glo-4 species:6239 "Caenorhabditis elegans"
[GO:0019915 "lipid storage" evidence=IMP] [GO:0045202 "synapse"
evidence=IDA] [GO:0030424 "axon" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0030424 GO:GO:0045202 GO:GO:0019915
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104208 EMBL:FO081074
PIR:T28816 PIR:T28817 RefSeq:NP_505392.2 ProteinModelPortal:Q5DX34
SMR:Q5DX34 STRING:Q5DX34 PaxDb:Q5DX34 EnsemblMetazoa:F07C3.4
GeneID:179306 KEGG:cel:CELE_F07C3.4 UCSC:F07C3.4 CTD:179306
WormBase:F07C3.4 HOGENOM:HOG000021586 InParanoid:Q5DX34 OMA:MANHEDV
NextBio:904820 Uniprot:Q5DX34
Length = 1392
Score = 176 (67.0 bits), Expect = 7.6e-18, Sum P(2) = 7.6e-18
Identities = 54/195 (27%), Positives = 80/195 (41%)
Query: 62 AAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSH 121
A C + H + + G+ WG N GQ G G + V I+K G+ H
Sbjct: 780 AIACGAEHILVLSSSGQLSAWGGNRFGQCGVGHSFRIANLHQVDG-DWPAIEKIACGQFH 838
Query: 122 TVVVTEDGNSLAFGWNKHGQLGSGSIRN--EIEPSPVRCLVSEVTATACGADFTVWLSSV 179
+ + DG+ FGW GQLG G N ++ P+ V L+ +VT ACG TV L+
Sbjct: 839 SAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRVNGLICKVTQIACGRAHTVVLTDT 898
Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
+L G YGQ+G D +K + P P L + +A
Sbjct: 899 --GRVLVCGSGSYGQMG---------VDDDIKKVFAFTPLP-----LGPLRVRDIATHYY 942
Query: 240 HTVAVDSKGYVYTWG 254
H++ + V+ WG
Sbjct: 943 HSICITEDNRVFEWG 957
Score = 154 (59.3 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 33/88 (37%), Positives = 45/88 (51%)
Query: 56 VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKA 115
+D V+ C H + EG YTWG+ QLGHG+K +R P V E + K
Sbjct: 1020 LDGNIVSVACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNERMEPHQVFEPNGAKWVNV 1079
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLG 143
G +HT+ T+DG+ A+G N GQ G
Sbjct: 1080 SLGNNHTIASTDDGSVFAWGKNDFGQCG 1107
Score = 133 (51.9 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 52/195 (26%), Positives = 83/195 (42%)
Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLS 177
G H +V++ G A+G N+ GQ G G V + ACG + ++
Sbjct: 784 GAEHILVLSSSGQLSAWGGNRFGQCGVGHSFRIANLHQVDGDWPAIEKIACGQFHSAFIC 843
Query: 178 SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
S +G S+ G +GQLGHG N N Q P + L + + ++ACG
Sbjct: 844 S-DG-SLWTFGWGVWGQLGHGGRNNSN------------QLVPTRVNGLICK-VTQIACG 888
Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV-ISAGSVN 296
HTV + G V G G YG++G D+ + ++V F + P I+ +
Sbjct: 889 RAHTVVLTDTGRVLVCGSGSYGQMG----VDDDI-KKVFAFTPLPLGPLRVRDIATHYYH 943
Query: 297 SSCTAGGGQLYMWGK 311
S C +++ WG+
Sbjct: 944 SICITEDNRVFEWGR 958
Score = 125 (49.1 bits), Expect = 7.6e-18, Sum P(2) = 7.6e-18
Identities = 27/81 (33%), Positives = 44/81 (54%)
Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVI 290
IV VACG +H+ + S+G +YTWG G +LGH + + P +V F+ N +
Sbjct: 1024 IVSVACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNERMEPHQV--FEPNGA--KWVNV 1079
Query: 291 SAGSVNSSCTAGGGQLYMWGK 311
S G+ ++ + G ++ WGK
Sbjct: 1080 SLGNNHTIASTDDGSVFAWGK 1100
Score = 96 (38.9 bits), Expect = 7.6e-06, Sum P(2) = 7.6e-06
Identities = 33/111 (29%), Positives = 47/111 (42%)
Query: 159 LVSEVTATACGADFTVWLSSVEGASIL-NAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L + + ACG + ++S EG GL Y QLGHG NE +
Sbjct: 1020 LDGNIVSVACGLSHSALITS-EGTLYTWGKGL-DY-QLGHGNKNE--------------R 1062
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
P + G V V+ G NHT+A G V+ WG +G+ G +K+
Sbjct: 1063 MEPHQVFEPNGAKWVNVSLGNNHTIASTDDGSVFAWGKNDFGQCGVLTKKN 1113
Score = 94 (38.1 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
Identities = 27/112 (24%), Positives = 45/112 (40%)
Query: 30 WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
W +G G + N + PTR+ L+ + C H V + GR G GQ
Sbjct: 856 WGQLGHG-GRNNSNQLVPTRVNGLI---CKVTQIACGRAHTVVLTDTGRVLVCGSGSYGQ 911
Query: 90 LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
+G D I++ L +++ H++ +TED F W ++ Q
Sbjct: 912 MGVDDDIKKVFAFTPLPLGPLRVRDIATHYYHSICITEDNR--VFEWGRNPQ 961
Score = 77 (32.2 bits), Expect = 7.3e-13, Sum P(2) = 7.3e-13
Identities = 26/98 (26%), Positives = 41/98 (41%)
Query: 273 RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-LK-----NNGDDWMYPKPLM 326
R V F N++ ++ G +S+ G LY WGK L N ++ M P +
Sbjct: 1014 REVKHFLDGNIVS----VACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNERMEPHQVF 1069
Query: 327 DLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELG 363
+ +G + GN H D S +WG +G+ G
Sbjct: 1070 EPNGAKWVNVSLGNNHTIASTDDGSVFAWGKNDFGQCG 1107
Score = 53 (23.7 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 381 LEGMHVISVACGYGHSLVIVDRTNV---GERLD 410
L+G +++SVACG HS +I + G+ LD
Sbjct: 1020 LDG-NIVSVACGLSHSALITSEGTLYTWGKGLD 1051
>MGI|MGI:1890646 [details] [associations]
symbol:Nek8 "NIMA (never in mitosis gene a)-related
expressed kinase 8" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005929 "cilium" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0042995 "cell projection" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0072372 "primary
cilium" evidence=IDA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 MGI:MGI:1890646 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005524 GO:GO:0005737 GO:GO:0005856 GO:GO:0046872
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104137 CTD:284086 HOGENOM:HOG000006908
HOVERGEN:HBG098799 OMA:EREVFAW OrthoDB:EOG4PZJ65 EMBL:AF407579
EMBL:AK154358 EMBL:BC070457 IPI:IPI00135930 RefSeq:NP_543125.1
UniGene:Mm.23788 ProteinModelPortal:Q91ZR4 SMR:Q91ZR4 IntAct:Q91ZR4
MINT:MINT-1341145 STRING:Q91ZR4 PhosphoSite:Q91ZR4 PRIDE:Q91ZR4
Ensembl:ENSMUST00000017549 GeneID:140859 KEGG:mmu:140859
InParanoid:Q91ZR4 NextBio:370021 Bgee:Q91ZR4 Genevestigator:Q91ZR4
GermOnline:ENSMUSG00000017405 Uniprot:Q91ZR4
Length = 698
Score = 243 (90.6 bits), Expect = 9.1e-18, P = 9.1e-18
Identities = 78/279 (27%), Positives = 126/279 (45%)
Query: 55 GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK 114
GV I+ VA G + C+ D G T+G G LGHG+ +PTIV L Y++ +
Sbjct: 396 GVTIKHVACGDLFTACLT-D-RGIIMTFGSGSNGCLGHGNLTDISQPTIVEALLGYEMVQ 453
Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFT 173
G SH + ++ DG A+G G+LG G+ + P V E CG D +
Sbjct: 454 VACGASHVLALSTDGELFAWGRGDGGRLGLGTRESHNCPQQVPVAPGQEAQRVVCGIDSS 513
Query: 174 VWLSSVEGASILNAGLPQYGQLG--HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
+ L+S +L G ++ +LG H + +E V+ A P A L E +
Sbjct: 514 MILTSP--GRVLACGSNRFNKLGLDHLSLDEEPVPYQQVEEALSFTPL--GSAPLDQEPL 569
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
+ V GT H+ A+ + G YT+G +G+LG ++ P RV + ++ +++
Sbjct: 570 LCVDLGTAHSAAITASGDCYTFGSNQHGQLGTSSRRVSRAPCRVQGLEGIKMV----MVA 625
Query: 292 AGSVNSSCTAGGGQLYMWGK-----LKNNGDDWMYPKPL 325
G + G++Y WGK L +D P+P+
Sbjct: 626 CGDAFTVAVGAEGEVYSWGKGTRGRLGRRDEDAGLPRPV 664
Score = 241 (89.9 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 74/247 (29%), Positives = 117/247 (47%)
Query: 42 GNLVS---PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
GNL PT + L+G ++ V C + H +A+ +G + WGR + G+LG G +
Sbjct: 432 GNLTDISQPTIVEALLGYEM--VQVACGASHVLALSTDGELFAWGRGDGGRLGLGTRESH 489
Query: 99 DRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
+ P V + ++ G ++++T G LA G N+ +LG + + EP P +
Sbjct: 490 NCPQQVPVAPGQEAQRVVCGIDSSMILTSPGRVLACGSNRFNKLGLDHLSLDEEPVPYQQ 549
Query: 159 LVSEVTATACGA---D----FTVWLSSVEGASILNAG-LPQYGQLGHGTDNEYNTKDSSV 210
+ ++ T G+ D V L + A+I +G +G HG + T V
Sbjct: 550 VEEALSFTPLGSAPLDQEPLLCVDLGTAHSAAITASGDCYTFGSNQHG---QLGTSSRRV 606
Query: 211 KLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
A P + L G +V VACG TVAV ++G VY+WG G GRLG R++ D
Sbjct: 607 SRA------PCRVQGLEGIKMVMVACGDAFTVAVGAEGEVYSWGKGTRGRLGRRDE-DAG 659
Query: 271 VPRRVDV 277
+PR V +
Sbjct: 660 LPRPVQL 666
Score = 187 (70.9 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 84/314 (26%), Positives = 130/314 (41%)
Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPV---RCLVSEVTAT 166
++ + AGR+ VT G + + G G + +E P P R L + T
Sbjct: 339 EVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGTLLPGAVELPQPQFVSRFLEGQSGVT 398
Query: 167 ----ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
ACG FT L+ G I+ G G LGHG N D S +P
Sbjct: 399 IKHVACGDLFTACLTD-RGI-IMTFGSGSNGCLGHG-----NLTDIS---------QPTI 442
Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
+ AL G +V+VACG +H +A+ + G ++ WG G GRLG ++ P++V V
Sbjct: 443 VEALLGYEMVQVACGASHVLALSTDGELFAWGRGDGGRLGLGTRESHNCPQQVPVAPGQE 502
Query: 283 VLPPEAVISAGSVNSS----CTAGGGQLYMWGKLKNNGDDWMYP----------KPL--M 326
I + + +S G + G + D+ P PL
Sbjct: 503 AQRVVCGIDSSMILTSPGRVLACGSNRFNKLGLDHLSLDEEPVPYQQVEEALSFTPLGSA 562
Query: 327 DLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMH 385
L L C+D G H + A C ++G Q+G+LG ++ S P +V LEG+
Sbjct: 563 PLDQEPLLCVDLGTAHSAAITASGDCYTFGSNQHGQLGTS--SRRVSRAPCRVQGLEGIK 620
Query: 386 VISVACGYGHSLVI 399
++ VACG ++ +
Sbjct: 621 MVMVACGDAFTVAV 634
>WB|WBGene00021685 [details] [associations]
symbol:herc-1 species:6239 "Caenorhabditis elegans"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0006464 "cellular
protein modification process" evidence=IEA] [GO:0019915 "lipid
storage" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0000003 GO:GO:0019915 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00660000095216 HOGENOM:HOG000208452 EMBL:FO081800
HSSP:Q05086 RefSeq:NP_490834.1 ProteinModelPortal:Q9BL11 SMR:Q9BL11
STRING:Q9BL11 PaxDb:Q9BL11 EnsemblMetazoa:Y48G8AL.1.1
EnsemblMetazoa:Y48G8AL.1.2 GeneID:171700 KEGG:cel:CELE_Y48G8AL.1
UCSC:Y48G8AL.1 CTD:171700 WormBase:Y48G8AL.1 InParanoid:Q9BL11
OMA:PRELMEL NextBio:872357 Uniprot:Q9BL11
Length = 1019
Score = 194 (73.4 bits), Expect = 6.0e-12, P = 6.0e-12
Identities = 55/161 (34%), Positives = 81/161 (50%)
Query: 41 DGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD 99
DG + P + L GV I V AG + HC+A+ G +TWG+N G+LG D +
Sbjct: 174 DGRCIHRPEPVEQLSGVPIVRVLAG--ARHCLALSASGAVFTWGQNNSGELGIDDLRPQT 231
Query: 100 RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSPVRC 158
V ++ + +A G +HTV++T G + +FG + GQ G G + P+ V
Sbjct: 232 SVQHVHQMDGLGVVEAACGDNHTVLLTHCGRTFSFGSDALGQCGFGKKVEKRTNPTAVSD 291
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
L+ S VT A GA T+ + +GA GL GQLG+G
Sbjct: 292 LIGSHVTRIAAGACHTIAIC--KGAPY-PFGLNSSGQLGNG 329
Score = 190 (71.9 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 91/332 (27%), Positives = 139/332 (41%)
Query: 83 GRNERGQLG---HGDKIQRDRPTI--VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
G GQLG IQ I +++ + G HTV +T+DG + G N
Sbjct: 9 GHTGEGQLGVRLSESTIQVPERIIGAPNDMDGTAVTSVTCGEQHTVFLTKDGKMWSVGSN 68
Query: 138 KHGQLGSGSIRNEIEPS--PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
GQLG GS R E S PV S A + +S + + G ++GQL
Sbjct: 69 MDGQLGRGS-RTEGSFSIYPVSW-TSSAKIIQISAGRSHTVSVTDDGRVFAWGSNEHGQL 126
Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
G +S K + Q PR + + IV+VA G+NH +A+D G V+ WG
Sbjct: 127 G---------MES--KFTW--QGTPRRVQEI--NDIVQVASGSNHCIALDEGGRVFVWGE 171
Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN 315
GR HR P V+ Q + V P + AG+ + + G ++ WG+ N+
Sbjct: 172 QADGRCIHR-------PEPVE--QLSGV--PIVRVLAGARHCLALSASGAVFTWGQ-NNS 219
Query: 316 GD---DWMYPKPLMD----LSGWNLRCMDSGNMHHFVGADSS-CISWGHAQYGELGYGPY 367
G+ D + P+ + + G + G+ H + S+G G+ G+G
Sbjct: 220 GELGIDDLRPQTSVQHVHQMDGLGVVEAACGDNHTVLLTHCGRTFSFGSDALGQCGFGKK 279
Query: 368 GQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+K + P V L G HV +A G H++ I
Sbjct: 280 VEKRTN-PTAVSDLIGSHVTRIAAGACHTIAI 310
Score = 171 (65.3 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 59/183 (32%), Positives = 89/183 (48%)
Query: 22 LLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGV--DIRFVAAGCVSC---HCVAVDVE 76
LL CG T +G R + + P R+ +G D+ A V+C H V + +
Sbjct: 5 LLGCGHTGEGQLGVRLS--ESTIQVPERI---IGAPNDMDGTAVTSVTCGEQHTVFLTKD 59
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTI-VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G+ ++ G N GQLG G + + VS S KI + AGRSHTV VT+DG A+G
Sbjct: 60 GKMWSVGSNMDGQLGRGSRTEGSFSIYPVSWTSSAKIIQISAGRSHTVSVTDDGRVFAWG 119
Query: 136 WNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
N+HGQLG S + + +P R ++++ A G++ + L EG + G G+
Sbjct: 120 SNEHGQLGMES-KFTWQGTPRRVQEINDIVQVASGSNHCIALD--EGGRVFVWGEQADGR 176
Query: 195 LGH 197
H
Sbjct: 177 CIH 179
Score = 156 (60.0 bits), Expect = 9.5e-08, P = 9.5e-08
Identities = 47/143 (32%), Positives = 67/143 (46%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ-RDRPTIVSELSKYKIKKAGAGR 119
V A C H V + GR +++G + GQ G G K++ R PT VS+L + + AG
Sbjct: 245 VEAACGDNHTVLLTHCGRTFSFGSDALGQCGFGKKVEKRTNPTAVSDLIGSHVTRIAAGA 304
Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSS- 178
HT+ + + G FG N GQLG+G I + P L VT G T ++ S
Sbjct: 305 CHTIAICK-GAPYPFGLNSSGQLGNGKIMTQSTPRKTDEL-DHVTGVFAGYHQTFFVRSS 362
Query: 179 --VEGASILNAGLP-QYG-QLGH 197
+E I+ P QY +L H
Sbjct: 363 GTIEQNEIVGPSCPMQYPIKLDH 385
Score = 126 (49.4 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 48/188 (25%), Positives = 81/188 (43%)
Query: 219 RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
RP + L+G IV+V G H +A+ + G V+TWG G LG + + + + V
Sbjct: 180 RPEPVEQLSGVPIVRVLAGARHCLALSASGAVFTWGQNNSGELGIDDLRPQTSVQHVHQM 239
Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK--LKNNG-----DDWMYPKPLMDLSGW 331
V+ EA + G ++ G+ + +G L G + P + DL G
Sbjct: 240 DGLGVV--EA--ACGDNHTVLLTHCGRTFSFGSDALGQCGFGKKVEKRTNPTAVSDLIGS 295
Query: 332 NLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVAC 391
++ + +G H + +G G+LG G +S+ P+K D L+ HV V
Sbjct: 296 HVTRIAAGACHTIAICKGAPYPFGLNSSGQLGNGKIMTQST--PRKTDELD--HVTGVFA 351
Query: 392 GYGHSLVI 399
GY + +
Sbjct: 352 GYHQTFFV 359
>UNIPROTKB|Q9BL11 [details] [associations]
symbol:herc-1 "Protein HERC-1" species:6239 "Caenorhabditis
elegans" [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0005634 "nucleus"
evidence=IBA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0000003 GO:GO:0019915 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 GeneTree:ENSGT00660000095216 HOGENOM:HOG000208452
EMBL:FO081800 HSSP:Q05086 RefSeq:NP_490834.1
ProteinModelPortal:Q9BL11 SMR:Q9BL11 STRING:Q9BL11 PaxDb:Q9BL11
EnsemblMetazoa:Y48G8AL.1.1 EnsemblMetazoa:Y48G8AL.1.2 GeneID:171700
KEGG:cel:CELE_Y48G8AL.1 UCSC:Y48G8AL.1 CTD:171700
WormBase:Y48G8AL.1 InParanoid:Q9BL11 OMA:PRELMEL NextBio:872357
Uniprot:Q9BL11
Length = 1019
Score = 194 (73.4 bits), Expect = 6.0e-12, P = 6.0e-12
Identities = 55/161 (34%), Positives = 81/161 (50%)
Query: 41 DGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD 99
DG + P + L GV I V AG + HC+A+ G +TWG+N G+LG D +
Sbjct: 174 DGRCIHRPEPVEQLSGVPIVRVLAG--ARHCLALSASGAVFTWGQNNSGELGIDDLRPQT 231
Query: 100 RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSPVRC 158
V ++ + +A G +HTV++T G + +FG + GQ G G + P+ V
Sbjct: 232 SVQHVHQMDGLGVVEAACGDNHTVLLTHCGRTFSFGSDALGQCGFGKKVEKRTNPTAVSD 291
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
L+ S VT A GA T+ + +GA GL GQLG+G
Sbjct: 292 LIGSHVTRIAAGACHTIAIC--KGAPY-PFGLNSSGQLGNG 329
Score = 190 (71.9 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 91/332 (27%), Positives = 139/332 (41%)
Query: 83 GRNERGQLG---HGDKIQRDRPTI--VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
G GQLG IQ I +++ + G HTV +T+DG + G N
Sbjct: 9 GHTGEGQLGVRLSESTIQVPERIIGAPNDMDGTAVTSVTCGEQHTVFLTKDGKMWSVGSN 68
Query: 138 KHGQLGSGSIRNEIEPS--PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
GQLG GS R E S PV S A + +S + + G ++GQL
Sbjct: 69 MDGQLGRGS-RTEGSFSIYPVSW-TSSAKIIQISAGRSHTVSVTDDGRVFAWGSNEHGQL 126
Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
G +S K + Q PR + + IV+VA G+NH +A+D G V+ WG
Sbjct: 127 G---------MES--KFTW--QGTPRRVQEI--NDIVQVASGSNHCIALDEGGRVFVWGE 171
Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN 315
GR HR P V+ Q + V P + AG+ + + G ++ WG+ N+
Sbjct: 172 QADGRCIHR-------PEPVE--QLSGV--PIVRVLAGARHCLALSASGAVFTWGQ-NNS 219
Query: 316 GD---DWMYPKPLMD----LSGWNLRCMDSGNMHHFVGADSS-CISWGHAQYGELGYGPY 367
G+ D + P+ + + G + G+ H + S+G G+ G+G
Sbjct: 220 GELGIDDLRPQTSVQHVHQMDGLGVVEAACGDNHTVLLTHCGRTFSFGSDALGQCGFGKK 279
Query: 368 GQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
+K + P V L G HV +A G H++ I
Sbjct: 280 VEKRTN-PTAVSDLIGSHVTRIAAGACHTIAI 310
Score = 171 (65.3 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 59/183 (32%), Positives = 89/183 (48%)
Query: 22 LLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGV--DIRFVAAGCVSC---HCVAVDVE 76
LL CG T +G R + + P R+ +G D+ A V+C H V + +
Sbjct: 5 LLGCGHTGEGQLGVRLS--ESTIQVPERI---IGAPNDMDGTAVTSVTCGEQHTVFLTKD 59
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTI-VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G+ ++ G N GQLG G + + VS S KI + AGRSHTV VT+DG A+G
Sbjct: 60 GKMWSVGSNMDGQLGRGSRTEGSFSIYPVSWTSSAKIIQISAGRSHTVSVTDDGRVFAWG 119
Query: 136 WNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
N+HGQLG S + + +P R ++++ A G++ + L EG + G G+
Sbjct: 120 SNEHGQLGMES-KFTWQGTPRRVQEINDIVQVASGSNHCIALD--EGGRVFVWGEQADGR 176
Query: 195 LGH 197
H
Sbjct: 177 CIH 179
Score = 156 (60.0 bits), Expect = 9.5e-08, P = 9.5e-08
Identities = 47/143 (32%), Positives = 67/143 (46%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ-RDRPTIVSELSKYKIKKAGAGR 119
V A C H V + GR +++G + GQ G G K++ R PT VS+L + + AG
Sbjct: 245 VEAACGDNHTVLLTHCGRTFSFGSDALGQCGFGKKVEKRTNPTAVSDLIGSHVTRIAAGA 304
Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSS- 178
HT+ + + G FG N GQLG+G I + P L VT G T ++ S
Sbjct: 305 CHTIAICK-GAPYPFGLNSSGQLGNGKIMTQSTPRKTDEL-DHVTGVFAGYHQTFFVRSS 362
Query: 179 --VEGASILNAGLP-QYG-QLGH 197
+E I+ P QY +L H
Sbjct: 363 GTIEQNEIVGPSCPMQYPIKLDH 385
Score = 126 (49.4 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 48/188 (25%), Positives = 81/188 (43%)
Query: 219 RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
RP + L+G IV+V G H +A+ + G V+TWG G LG + + + + V
Sbjct: 180 RPEPVEQLSGVPIVRVLAGARHCLALSASGAVFTWGQNNSGELGIDDLRPQTSVQHVHQM 239
Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK--LKNNG-----DDWMYPKPLMDLSGW 331
V+ EA + G ++ G+ + +G L G + P + DL G
Sbjct: 240 DGLGVV--EA--ACGDNHTVLLTHCGRTFSFGSDALGQCGFGKKVEKRTNPTAVSDLIGS 295
Query: 332 NLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVAC 391
++ + +G H + +G G+LG G +S+ P+K D L+ HV V
Sbjct: 296 HVTRIAAGACHTIAICKGAPYPFGLNSSGQLGNGKIMTQST--PRKTDELD--HVTGVFA 351
Query: 392 GYGHSLVI 399
GY + +
Sbjct: 352 GYHQTFFV 359
>TAIR|locus:2205794 [details] [associations]
symbol:AT1G27060 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 EMBL:BT030023 IPI:IPI00535833 RefSeq:NP_174026.1
UniGene:At.41142 UniGene:At.50938 ProteinModelPortal:A2RVN2
SMR:A2RVN2 DNASU:839595 EnsemblPlants:AT1G27060.1 GeneID:839595
KEGG:ath:AT1G27060 TAIR:At1g27060 HOGENOM:HOG000236375
InParanoid:A2RVN2 OMA:GYIYAWG PhylomeDB:A2RVN2
ProtClustDB:CLSN2682864 Genevestigator:A2RVN2 Uniprot:A2RVN2
Length = 386
Score = 218 (81.8 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 59/196 (30%), Positives = 92/196 (46%)
Query: 65 CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVV 124
C H +A+ G+ +TWGR GQLGHGD + P +VS I +A AG SH+
Sbjct: 55 CGGAHVIALTSGGKVFTWGRGSSGQLGHGDILNITLPKLVSFFDDSVITQAAAGWSHSGF 114
Query: 125 VTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGAS 183
V++ G G GQLG G + P+ V ++ V ACG ++ L + G
Sbjct: 115 VSDSGCIFTCGNGSFGQLGHGDTLSLSTPAKVSHFNNDSVKMVACGMRHSLVLFA--GNQ 172
Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
+ G + GQLG +D + SV L P ++ L +V+++ +H+ A
Sbjct: 173 VCGFGSGKRGQLGFSSD-----RIKSVNL-------PCVVSGLKDVEVVRISANGDHSAA 220
Query: 244 VDSKGYVYTWGFGGYG 259
+ + G ++WG G G
Sbjct: 221 ISADGQFFSWGRGFCG 236
Score = 173 (66.0 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 63/212 (29%), Positives = 101/212 (47%)
Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
G GTD + T KL E P+ ++ +L +I +ACG H +A+ S G V+TWG
Sbjct: 21 GAGTDGQLGT----TKLQDELLPQLLSLTSLP--SISMLACGGAHVIALTSGGKVFTWGR 74
Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS-AGSVNSS-C--TAGGGQLYMWGK 311
G G+LGH + + +P+ V F + + A S +G V+ S C T G G +G+
Sbjct: 75 GSSGQLGHGDILNITLPKLVSFFDDSVITQAAAGWSHSGFVSDSGCIFTCGNGS---FGQ 131
Query: 312 LKNNGDDWMYPKPLMDLSGWN---LRCMDSGNMHHFV-GADSSCISWGHAQYGELGYGPY 367
L +GD P +S +N ++ + G H V A + +G + G+LG+
Sbjct: 132 L-GHGDTLSLSTPAK-VSHFNNDSVKMVACGMRHSLVLFAGNQVCGFGSGKRGQLGFSSD 189
Query: 368 GQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
KS +P V L+ + V+ ++ HS I
Sbjct: 190 RIKSVNLPCVVSGLKDVEVVRISANGDHSAAI 221
Score = 164 (62.8 bits), Expect = 5.1e-11, Sum P(2) = 5.1e-11
Identities = 53/189 (28%), Positives = 82/189 (43%)
Query: 76 EGRCYTWGRNERGQLGHGDKIQRDR-PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
E + ++WG GQLG K+Q + P ++S S I G +H + +T G +
Sbjct: 14 EEQVWSWGAGTDGQLGT-TKLQDELLPQLLSLTSLPSISMLACGGAHVIALTSGGKVFTW 72
Query: 135 GWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G GQLG G I N P V S +T A G + ++S + I G +G
Sbjct: 73 GRGSSGQLGHGDILNITLPKLVSFFDDSVITQAAAGWSHSGFVS--DSGCIFTCGNGSFG 130
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
QLGHG +T P ++ +++ VACG H++ + + V +
Sbjct: 131 QLGHGDTLSLST--------------PAKVSHFNNDSVKMVACGMRHSLVLFAGNQVCGF 176
Query: 254 GFGGYGRLG 262
G G G+LG
Sbjct: 177 GSGKRGQLG 185
Score = 151 (58.2 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 63/264 (23%), Positives = 106/264 (40%)
Query: 127 EDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVWLSSVEGASIL 185
E+ ++G GQLG+ +++E+ P + + ++ ACG + L+S G +
Sbjct: 13 EEEQVWSWGAGTDGQLGTTKLQDELLPQLLSLTSLPSISMLACGGAHVIALTS--GGKVF 70
Query: 186 NAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVD 245
G GQLGHG + N + L P+ ++ I + A G +H+ V
Sbjct: 71 TWGRGSSGQLGHG--DILN-----ITL-------PKLVSFFDDSVITQAAAGWSHSGFVS 116
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV------LPPEAVISAGSVNSSC 299
G ++T G G +G+LGH + P +V F ++V + V+ AG N C
Sbjct: 117 DSGCIFTCGNGSFGQLGHGDTLSLSTPAKVSHFNNDSVKMVACGMRHSLVLFAG--NQVC 174
Query: 300 TAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNL-RCMDSGNMHHFVGADSSCISWGHAQ 358
G G+ G + P + L + R +G+ + AD SWG
Sbjct: 175 GFGSGKRGQLGFSSDRIKSVNLPCVVSGLKDVEVVRISANGDHSAAISADGQFFSWGRGF 234
Query: 359 YGELGYGPYGQKSSAMPKKVDILE 382
G GP ++P + E
Sbjct: 235 CG----GPDVHAPQSLPSPLSFRE 254
Score = 150 (57.9 bits), Expect = 9.7e-08, P = 9.7e-08
Identities = 45/157 (28%), Positives = 77/157 (49%)
Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
V++WG G G+LG + +DE +P+ + + LP ++++ G + GG+++ W
Sbjct: 17 VWSWGAGTDGQLGTTKLQDELLPQLLSLTS----LPSISMLACGGAHVIALTSGGKVFTW 72
Query: 310 GKLKN----NGD--DWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGEL 362
G+ + +GD + PK + + +G H +DS CI + G+ +G+L
Sbjct: 73 GRGSSGQLGHGDILNITLPKLVSFFDDSVITQAAAGWSHSGFVSDSGCIFTCGNGSFGQL 132
Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G+G S + P KV V VACG HSLV+
Sbjct: 133 GHGD--TLSLSTPAKVSHFNNDSVKMVACGMRHSLVL 167
Score = 118 (46.6 bits), Expect = 0.00036, P = 0.00036
Identities = 58/233 (24%), Positives = 93/233 (39%)
Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
+ I G +GQLGHG +T P ++ +++ VACG
Sbjct: 117 DSGCIFTCGNGSFGQLGHGDTLSLST--------------PAKVSHFNNDSVKMVACGMR 162
Query: 240 HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV-ISAGSVNSS 298
H++ + + V +G G G+LG + + V V +V E V ISA +S+
Sbjct: 163 HSLVLFAGNQVCGFGSGKRGQLGFSSDRIKSVNLPCVVSGLKDV---EVVRISANGDHSA 219
Query: 299 CTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV-GADSSCISWGHA 357
+ GQ + WG+ G D P+ L S + R + G H + D G
Sbjct: 220 AISADGQFFSWGRGFCGGPDVHAPQSLP--SPLSFREVAVGWNHALLLTVDGEVFKLGST 277
Query: 358 QYGELGYGPYGQK-----SSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
L P Q+ S A+ +KV +G+ V+ +A G HS + + V
Sbjct: 278 ----LNKQPEKQQLQIDSSEALFEKVPDFDGVKVMQIAAGAEHSAAVTENGEV 326
Score = 116 (45.9 bits), Expect = 0.00060, P = 0.00060
Identities = 35/126 (27%), Positives = 55/126 (43%)
Query: 56 VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTI----VSELSKYK 111
+ R VA G H + + V+G + G Q ++Q D V + K
Sbjct: 250 LSFREVAVGWN--HALLLTVDGEVFKLGSTLNKQ-PEKQQLQIDSSEALFEKVPDFDGVK 306
Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC----LVSEVTATA 167
+ + AG H+ VTE+G +GW +HGQLG G+ ++ P V L ++
Sbjct: 307 VMQIAAGAEHSAAVTENGEVKTWGWGEHGQLGLGNTNDQTSPELVSLGSIDLRTKEIKVY 366
Query: 168 CGADFT 173
CG+ FT
Sbjct: 367 CGSGFT 372
Score = 56 (24.8 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 18/91 (19%), Positives = 42/91 (46%)
Query: 311 KLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQ 369
+L+ + + ++ K + D G + + +G H ++ + +WG ++G+LG G
Sbjct: 286 QLQIDSSEALFEK-VPDFDGVKVMQIAAGAEHSAAVTENGEVKTWGWGEHGQLGLGNTND 344
Query: 370 KSSAMPKKVDILE-GMHVISVACGYGHSLVI 399
++S + ++ I V CG G + +
Sbjct: 345 QTSPELVSLGSIDLRTKEIKVYCGSGFTYAV 375
>UNIPROTKB|F1N7C1 [details] [associations]
symbol:HERC6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
OMA:HIFAGTY EMBL:DAAA02017014 IPI:IPI00825680 UniGene:Bt.42179
Ensembl:ENSBTAT00000027362 NextBio:20874614 Uniprot:F1N7C1
Length = 1016
Score = 243 (90.6 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 86/303 (28%), Positives = 140/303 (46%)
Query: 114 KAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSPVRCLVS-EVTATACGAD 171
+A +G H++++ DG + G N GQLG G+ R E +P + L + V +CG +
Sbjct: 27 QAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGE-QPERIPALETLNVALVSCGKE 85
Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
+ L+ + G GQLG G E+ K+++ P+ I LAG I
Sbjct: 86 HS--LAVCHKGRVFAWGAASEGQLGIG---EF--KETTFI--------PKKIKTLAGIKI 130
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLG-HREQKDEWVPRRVDVFQRNNVLPPEAVI 290
++VACG H+VA+ G V++WG +G+LG +E + P+RV + + P A +
Sbjct: 131 IQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLE--GI--PLAQV 186
Query: 291 SAGSVNSSCTAGGGQLYMWGKLK--------NNGDDWMY-PKPLMDLSGWNLRCMDSGNM 341
+AG +S + G + WG NN Y P + L + + G
Sbjct: 187 AAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYK 246
Query: 342 HHFV-GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
H V D ++G YG+LG+ P +K P+ V+ +EG+ V + CG H+L +
Sbjct: 247 HTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRG--PQLVERIEGL-VSQIDCGSDHTLAYI 303
Query: 401 DRT 403
T
Sbjct: 304 YTT 306
Score = 198 (74.8 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 69/287 (24%), Positives = 118/287 (41%)
Query: 29 CWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERG 88
CW A GRR P R R + + A H + + +G + G N RG
Sbjct: 4 CWRAGGRR----------PLRERQVCAGGNTLLQAASGEHHSLLLLSDGTVQSCGDNSRG 53
Query: 89 QLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIR 148
QLG + ++P + L + G+ H++ V G A+G GQLG G +
Sbjct: 54 QLGRKGTPRGEQPERIPALETLNVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFK 113
Query: 149 NE-IEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
P ++ L ++ ACG +V LS E + + G +GQLG G +
Sbjct: 114 ETTFIPKKIKTLAGIKIIQVACGHYHSVALS--EDGQVFSWGTNSHGQLGLGKE------ 165
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRL---GH 263
+ +Q P+ + +L G + +VA G +H+ A+ G + WG G+L G+
Sbjct: 166 -------FPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGN 218
Query: 264 REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ P + + V+ IS G +++ G+++ +G
Sbjct: 219 NAPVQRYKPVSIGALKTLGVVS----ISCGYKHTAVLTQDGKVFTFG 261
Score = 192 (72.6 bits), Expect = 9.9e-12, P = 9.9e-12
Identities = 45/132 (34%), Positives = 64/132 (48%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL---GHGDKIQRDRPT 102
SP R+R L G+ + VAAG H A+ + G + WG N GQL G+ +QR +P
Sbjct: 171 SPQRVRSLEGIPLAQVAAG--GHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPV 228
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE 162
+ L + G HT V+T+DG FG N +GQLG + P V +
Sbjct: 229 SIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGPQLVERIEGL 288
Query: 163 VTATACGADFTV 174
V+ CG+D T+
Sbjct: 289 VSQIDCGSDHTL 300
>TAIR|locus:2025277 [details] [associations]
symbol:PRAF1 "AT1G76950" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=ISS]
[GO:0008536 "Ran GTPase binding" evidence=ISS] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR000306 Pfam:PF01363
SMART:SM00064 INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0046872
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR013591 Pfam:PF08381
PROSITE:PS51514 HSSP:Q15075 EMBL:AF323270 IPI:IPI00521580
RefSeq:NP_565144.1 UniGene:At.19186 ProteinModelPortal:Q947D2
SMR:Q947D2 PRIDE:Q947D2 EnsemblPlants:AT1G76950.1 GeneID:844030
KEGG:ath:AT1G76950 TAIR:At1g76950 InParanoid:Q947D2 OMA:WIPKRIA
PhylomeDB:Q947D2 ProtClustDB:CLSN2686442 Genevestigator:Q947D2
Uniprot:Q947D2
Length = 1103
Score = 242 (90.2 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 100/382 (26%), Positives = 160/382 (41%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD--R 100
+++ P L + +D+ +A G H V +G +TWG G+LGHG I +D
Sbjct: 268 DVLVPKPLESNIVLDVHQIACGVR--HAAFVTRQGEIFTWGEESGGRLGHG--IGKDVFH 323
Query: 101 PTIVSELSKYK-IKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPSPVR 157
P +V L+ + G HT VT G +G H G LG GS + P +
Sbjct: 324 PRLVESLTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIA 383
Query: 158 CLVS--EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
+ V + +CG T ++S + G +G LGHG D E + Y
Sbjct: 384 GSLEGLHVASVSCGPWHTALITSY--GRLFTFGDGTFGVLGHG-DKE--------TVQY- 431
Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVD------------SKGYVYTWGFGGYGRLGH 263
PR + +L+G + V+CG HT AV S G ++TWG G RLGH
Sbjct: 432 ----PREVESLSGLRTIAVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGH 487
Query: 264 REQ----KDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDW 319
++ K VP +D + + + ++ + + G +Y G+L N D
Sbjct: 488 GDKDPRLKPTCVPALID-YNFHKIACGHSLTVGLTTSGQVFTMGSTVY--GQLGNLQTDG 544
Query: 320 MYPKPLMD-LSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
P + D L+ + + G H + + + +WG G LG+G + +P
Sbjct: 545 KLPCLVEDKLASEFVEEISCGAYHVAALTSRNEVYTWGKGANGRLGHGDLEDRK--VPTI 602
Query: 378 VDILEGMHVISVACGYGHSLVI 399
V+ L+ HV +ACG ++ I
Sbjct: 603 VEALKDRHVKYIACGSNYTAAI 624
Score = 198 (74.8 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 50/180 (27%), Positives = 88/180 (48%)
Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISA 292
++ACG H V +G ++TWG GRLGH KD + PR V+ + + ++
Sbjct: 285 QIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHPRLVESLTATSSVD---FVAC 341
Query: 293 GSVNSSCTAGGGQLYMWGK------LKNNGDD---WMYPKPLM-DLSGWNLRCMDSGNMH 342
G ++ G+LY WG L +G D W+ PK + L G ++ + G H
Sbjct: 342 GEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWI-PKRIAGSLEGLHVASVSCGPWH 400
Query: 343 H-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
+ + ++G +G LG+G +++ P++V+ L G+ I+V+CG H+ +V+
Sbjct: 401 TALITSYGRLFTFGDGTFGVLGHGD--KETVQYPREVESLSGLRTIAVSCGVWHTAAVVE 458
>UNIPROTKB|Q9N1T2 [details] [associations]
symbol:RPGR "X-linked retinitis pigmentosa GTPase
regulator" species:9615 "Canis lupus familiaris" [GO:0036126 "sperm
flagellum" evidence=ISS] [GO:0036064 "cilium basal body"
evidence=ISS] [GO:0042073 "intraflagellar transport" evidence=ISS]
[GO:0042384 "cilium assembly" evidence=ISS] [GO:0005813
"centrosome" evidence=ISS] [GO:0007601 "visual perception"
evidence=ISS] [GO:0005794 "Golgi apparatus" evidence=ISS]
[GO:0035085 "cilium axoneme" evidence=IEA] [GO:0050896 "response to
stimulus" evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005794 GO:GO:0005813 GO:GO:0007601 GO:GO:0050896
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085
GO:GO:0042384 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042073 eggNOG:COG5184 GO:GO:0036064
GO:GO:0036126 EMBL:AF148798 EMBL:AF148799 EMBL:AF148800
EMBL:AF148801 RefSeq:NP_001003126.1 UniGene:Cfa.3592
ProteinModelPortal:Q9N1T2 STRING:Q9N1T2 GeneID:403726
KEGG:cfa:403726 CTD:6103 HOGENOM:HOG000231314 HOVERGEN:HBG026899
InParanoid:Q9N1T2 NextBio:20817229 Uniprot:Q9N1T2
Length = 1003
Score = 241 (89.9 bits), Expect = 2.9e-17, P = 2.9e-17
Identities = 84/293 (28%), Positives = 137/293 (46%)
Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWL 176
G HT VVT + FG N GQLG GS +P+ V+ L E V ACG + T L
Sbjct: 43 GDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHT--L 100
Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC 236
S EG + AG GQLG G E +T +++ R I +++
Sbjct: 101 VSTEGGKVYAAGGNNEGQLGLGDTEERSTFHL---ISFFTSQRK----------IKQLSA 147
Query: 237 GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVN 296
G+N + A+ G ++ WG G++G + VP++V V + P + IS G +
Sbjct: 148 GSNTSAALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTVGK------PISWISCGYYH 201
Query: 297 SSCTAGGGQLYMWGK-------LKNNG-DDWMYPKPLMDLSGWNLRCMDSGNMHHFVGAD 348
S+ GQLY +G+ L N + P+P+ + G ++ G H V +
Sbjct: 202 SAFVTTEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPGKVVQVACGGG-HTVVLTE 260
Query: 349 SSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
+ ++G Q+G+LG G + ++S +PK ++ ++ + +ACG H+ +I D
Sbjct: 261 KAVYTFGLGQFGQLGLGTFLFETS-VPKAIEHIKDQKISFIACGENHTALITD 312
Score = 237 (88.5 bits), Expect = 8.2e-17, P = 8.2e-17
Identities = 74/242 (30%), Positives = 118/242 (48%)
Query: 22 LLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
L GS W +G G+ + PT ++ L ++F A G H + G+ Y
Sbjct: 56 LYMFGSNNWGQLGL--GS-KSTVSKPTCVKALKPEKVKFAACG--RNHTLVSTEGGKVYA 110
Query: 82 WGRNERGQLGHGDKIQRDRPTIVSEL-SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
G N GQLG GD +R ++S S+ KIK+ AG + + +TEDG +G N G
Sbjct: 111 AGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTEDGELFMWGDNSEG 170
Query: 141 QLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTD 200
Q+G ++ N P V + ++ +CG + ++++ EG + G P+ G+LG
Sbjct: 171 QIGLENVTNVCVPQQVT-VGKPISWISCGYYHSAFVTT-EG-QLYTFGEPECGKLG--LP 225
Query: 201 NEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGR 260
N+ L P+P + + G+ +V+VACG HTV + K VYT+G G +G+
Sbjct: 226 NQL--------LVNHRMPQP--VPGIPGK-VVQVACGGGHTVVLTEKA-VYTFGLGQFGQ 273
Query: 261 LG 262
LG
Sbjct: 274 LG 275
Score = 205 (77.2 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 93/344 (27%), Positives = 142/344 (41%)
Query: 65 CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVV 124
C H V + Y +G N GQLG G K +PT V L K+K A GR+HT+V
Sbjct: 42 CGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHTLV 101
Query: 125 VTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASI 184
TE G A G N GQLG G E S L+S T+ + + S
Sbjct: 102 STEGGKVYAAGGNNEGQLGLGDTE---ERSTFH-LISFFTSQRK-------IKQLSAGSN 150
Query: 185 LNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR-PRAIAALAGETIVKVACGTNHTVA 243
+A L + G+L DN + + L P+ + G+ I ++CG H+
Sbjct: 151 TSAALTEDGELFMWGDNS----EGQIGLENVTNVCVPQQVTV--GKPISWISCGYYHSAF 204
Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV-ISAGSVNSSC--- 299
V ++G +YT+G G+LG Q V R+ Q +P + V ++ G ++
Sbjct: 205 VTTEGQLYTFGEPECGKLGLPNQL--LVNHRMP--QPVPGIPGKVVQVACGGGHTVVLTE 260
Query: 300 ----TAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SW 354
T G GQ G L + PK + + + + G H + D + ++
Sbjct: 261 KAVYTFGLGQFGQLG-LGTFLFETSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTF 319
Query: 355 GHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLV 398
G ++G+LG G + +P V V+CG H+LV
Sbjct: 320 GDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCGGCHTLV 363
Score = 165 (63.1 bits), Expect = 9.5e-09, P = 9.5e-09
Identities = 51/190 (26%), Positives = 83/190 (43%)
Query: 219 RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
+P + AL E + ACG NHT+ G VY G G+LG + ++ + F
Sbjct: 77 KPTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFF 136
Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPK-----PLMDLSGWNL 333
+ +SAGS S+ G+L+MWG + G + P G +
Sbjct: 137 TSQRKIKQ---LSAGSNTSAALTEDGELFMWGD-NSEGQIGLENVTNVCVPQQVTVGKPI 192
Query: 334 RCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
+ G H FV + ++G + G+LG + MP+ V + G V+ VACG
Sbjct: 193 SWISCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPGK-VVQVACG 251
Query: 393 YGHSLVIVDR 402
GH++V+ ++
Sbjct: 252 GGHTVVLTEK 261
>UNIPROTKB|F1PBB3 [details] [associations]
symbol:HERC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:HIFAGTY EMBL:AAEX03016752
EMBL:AAEX03016750 EMBL:AAEX03016751 Ensembl:ENSCAFT00000015531
Uniprot:F1PBB3
Length = 1018
Score = 241 (89.9 bits), Expect = 2.9e-17, P = 2.9e-17
Identities = 75/255 (29%), Positives = 117/255 (45%)
Query: 25 CGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGR 84
CG +G+R L R+R L + + V+ G H +AV +GR + WG
Sbjct: 47 CGDNGRGQLGQRGAPCSAQLKE--RIRALETLHVDLVSCG--KEHSLAVCHKGRVFAWGA 102
Query: 85 NERGQLGHGDKIQRDR-PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG 143
GQLG G+ + + P + L+ KIK+ G H++ ++E G ++G N GQLG
Sbjct: 103 GSEGQLGTGEFKETNLIPMKIKTLNDIKIKQVSCGHYHSLALSEGGQVFSWGSNSDGQLG 162
Query: 144 SGS-IRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDN 201
G ++ P VR L + A G + LS + G S G GQL +
Sbjct: 163 LGKKFPSQASPQRVRSLDGIPLAQVAAGGAHSFALS-LSGTSF-GWGRNNAGQLAL---H 217
Query: 202 EYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRL 261
+ N S K P +I+AL ++ ++CG HTV + G V+T+G YG+L
Sbjct: 218 KNNVSGQSYK--------PYSISALKNLGVIYISCGYEHTVVLTQNGKVFTFGDNTYGQL 269
Query: 262 GHREQKDEWVPRRVD 276
GH ++ P+ V+
Sbjct: 270 GHSPTAEKSGPQLVE 284
Score = 199 (75.1 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 80/310 (25%), Positives = 137/310 (44%)
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGS-GSIRNEIEPSPVRCLVS-EVT 164
L ++++A +G H++++ +G + G N GQLG G+ + +R L + V
Sbjct: 20 LGGVELRQAASGERHSLLLLSNGQVHSCGDNGRGQLGQRGAPCSAQLKERIRALETLHVD 79
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
+CG + + L+ + G GQLG G E N P I
Sbjct: 80 LVSCGKEHS--LAVCHKGRVFAWGAGSEGQLGTGEFKETNLI-------------PMKIK 124
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG-HREQKDEWVPRRVDVFQRNNV 283
L I +V+CG H++A+ G V++WG G+LG ++ + P+RV + +
Sbjct: 125 TLNDIKIKQVSCGHYHSLALSEGGQVFSWGSNSDGQLGLGKKFPSQASPQRVRSL--DGI 182
Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWGKL--------KNNGDDWMY-PKPLMDLSGWNLR 334
P A ++AG +S + G + WG+ KNN Y P + L +
Sbjct: 183 --PLAQVAAGGAHSFALSLSGTSFGWGRNNAGQLALHKNNVSGQSYKPYSISALKNLGVI 240
Query: 335 CMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGY 393
+ G H V + + ++G YG+LG+ P +KS P+ V+ ++G+ V + CG
Sbjct: 241 YISCGYEHTVVLTQNGKVFTFGDNTYGQLGHSPTAEKSG--PQLVEGIDGL-VSQIDCGS 297
Query: 394 GHSLVIVDRT 403
H+L V T
Sbjct: 298 YHTLAYVYTT 307
Score = 190 (71.9 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 56/200 (28%), Positives = 92/200 (46%)
Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD-EWVPRR 274
AQ + R I AL + V+CG H++AV KG V+ WG G G+LG E K+ +P +
Sbjct: 64 AQLKER-IRALETLHVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLIPMK 122
Query: 275 VDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDW---MYPKPLMD 327
+ N++ + +S G +S + GGQ++ WG + G + P+ +
Sbjct: 123 IKTL--NDIKIKQ--VSCGHYHSLALSEGGQVFSWGSNSDGQLGLGKKFPSQASPQRVRS 178
Query: 328 LSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKS-SAMPKKVDILEGMH 385
L G L + +G H F + + WG G+L S P + L+ +
Sbjct: 179 LDGIPLAQVAAGGAHSFALSLSGTSFGWGRNNAGQLALHKNNVSGQSYKPYSISALKNLG 238
Query: 386 VISVACGYGHSLVIVDRTNV 405
VI ++CGY H++V+ V
Sbjct: 239 VIYISCGYEHTVVLTQNGKV 258
Score = 181 (68.8 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 64/264 (24%), Positives = 112/264 (42%)
Query: 53 LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH-GDKIQRDRPTIVSELSKYK 111
L GV++R A+G H + + G+ ++ G N RGQLG G + L
Sbjct: 20 LGGVELRQAASG--ERHSLLLLSNGQVHSCGDNGRGQLGQRGAPCSAQLKERIRALETLH 77
Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN-EIEPSPVRCLVS-EVTATACG 169
+ G+ H++ V G A+G GQLG+G + + P ++ L ++ +CG
Sbjct: 78 VDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLIPMKIKTLNDIKIKQVSCG 137
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
++ LS EG + + G GQLG G + +Q P+ + +L G
Sbjct: 138 HYHSLALS--EGGQVFSWGSNSDGQLGLGKK-------------FPSQASPQRVRSLDGI 182
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG-HREQKD--EWVPRRVDVFQRNNVLPP 286
+ +VA G H+ A+ G + WG G+L H+ + P + + V+
Sbjct: 183 PLAQVAAGGAHSFALSLSGTSFGWGRNNAGQLALHKNNVSGQSYKPYSISALKNLGVI-- 240
Query: 287 EAVISAGSVNSSCTAGGGQLYMWG 310
IS G ++ G+++ +G
Sbjct: 241 --YISCGYEHTVVLTQNGKVFTFG 262
Score = 180 (68.4 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 45/132 (34%), Positives = 65/132 (49%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG-HGDKI--QRDRPT 102
SP R+R L G+ + VAAG H A+ + G + WGRN GQL H + + Q +P
Sbjct: 172 SPQRVRSLDGIPLAQVAAG--GAHSFALSLSGTSFGWGRNNAGQLALHKNNVSGQSYKPY 229
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE 162
+S L + G HTVV+T++G FG N +GQLG + P V +
Sbjct: 230 SISALKNLGVIYISCGYEHTVVLTQNGKVFTFGDNTYGQLGHSPTAEKSGPQLVEGIDGL 289
Query: 163 VTATACGADFTV 174
V+ CG+ T+
Sbjct: 290 VSQIDCGSYHTL 301
Score = 139 (54.0 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 49/199 (24%), Positives = 87/199 (43%)
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQK-DEWVPRRVD 276
P R L G + + A G H++ + S G V++ G G G+LG R + R+
Sbjct: 12 PVSRRRVGLGGVELRQAASGERHSLLLLSNGQVHSCGDNGRGQLGQRGAPCSAQLKERIR 71
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN--G-----DDWMYPKPLMDLS 329
+ +V ++S G +S G+++ WG G + + P + L+
Sbjct: 72 ALETLHV----DLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLIPMKIKTLN 127
Query: 330 GWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVIS 388
++ + G+ H ++ + SWG G+LG G S A P++V L+G+ +
Sbjct: 128 DIKIKQVSCGHYHSLALSEGGQVFSWGSNSDGQLGLGKKFP-SQASPQRVRSLDGIPLAQ 186
Query: 389 VACGYGHSLVI-VDRTNVG 406
VA G HS + + T+ G
Sbjct: 187 VAAGGAHSFALSLSGTSFG 205
>UNIPROTKB|F1NBC5 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 EMBL:AADN02016126 EMBL:AADN02016127
EMBL:AADN02016128 EMBL:AADN02016129 IPI:IPI00572483
Ensembl:ENSGALT00000016878 ArrayExpress:F1NBC5 Uniprot:F1NBC5
Length = 1050
Score = 241 (89.9 bits), Expect = 3.1e-17, P = 3.1e-17
Identities = 79/278 (28%), Positives = 121/278 (43%)
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSP-VRCLVSEVTATACGADFTVWLSSVEGASILNAGLP 190
L +G++ GQ G GS I P P V + + + +E + GL
Sbjct: 2 LCWGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLN 61
Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
GQLGH ++ ++P P I ALAG+ IV VACG +H+VA+ +G V
Sbjct: 62 TKGQLGHESEG--------------SKPEP--IGALAGQHIVHVACGESHSVALSDQGQV 105
Query: 251 YTWGFGGYGRLGHREQKDE-WVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
++WG G G+LG +D VPR + + +L IS G+ + A GQ + W
Sbjct: 106 FSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQ----ISCGNWHCLALAADGQFFTW 161
Query: 310 GK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGE 361
G+ L P+ + L G L + +G H F + S + WG G+
Sbjct: 162 GQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQ 221
Query: 362 LGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
LG + S P V +L V+ ++CG H+ V+
Sbjct: 222 LGLSDERDRES--PCHVKLLRSQKVVYISCGEEHTAVL 257
Score = 238 (88.8 bits), Expect = 6.8e-17, P = 6.8e-17
Identities = 93/328 (28%), Positives = 146/328 (44%)
Query: 82 WGRNERGQLGHGDKIQR--DRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
WG + GQ G G +Q P + + +K+ G +H+V + EDG G N
Sbjct: 4 WGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
GQLG S ++ P P+ L + + ACG +V LS +G + + G GQLG
Sbjct: 64 GQLGHESEGSK--PEPIGALAGQHIVHVACGESHSVALSD-QG-QVFSWGAGSDGQLG-- 117
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
T + +V + PR I L +TI++++CG H +A+ + G +TWG Y
Sbjct: 118 ----LTTIEDAVTV-------PRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSY 166
Query: 259 GRLG-HREQKDEWVPRRV---DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
G+LG +E + P+RV D V A A S+ S G G+ G+L
Sbjct: 167 GQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSL-SGAVFGWGKNSS-GQLGL 224
Query: 315 NGD-DWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSS 372
+ + D P + L + + G H V S + ++G G+LG+ + +
Sbjct: 225 SDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN 284
Query: 373 AMPKKVDILEGMHVISVACGYGHSLVIV 400
P++V L G V +ACG H+L V
Sbjct: 285 --PRRVLELMGSEVSQIACGRHHTLAFV 310
Score = 230 (86.0 bits), Expect = 5.6e-16, P = 5.6e-16
Identities = 58/155 (37%), Positives = 80/155 (51%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
SP R++ L G+ + VAAG H A+ + G + WG+N GQLG D+ R+ P V
Sbjct: 180 SPQRVKSLDGIPLAQVAAG--GAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVK 237
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L K+ G HT V+T+ G FG GQLG S+ +E+ P V L+ SEV+
Sbjct: 238 LLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVS 297
Query: 165 ATACGADFTVWLSSVEGASILNA-GLPQYGQLGHG 198
ACG T L+ V + ++ A G GQLG G
Sbjct: 298 QIACGRHHT--LAFVPSSGMIYAFGCGTRGQLGTG 330
Score = 227 (85.0 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 83/314 (26%), Positives = 144/314 (45%)
Query: 65 CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVV 124
C H V + +G YT G N +GQLGH + + +P + L+ I G SH+V
Sbjct: 41 CGGNHSVFLLEDGEVYTCGLNTKGQLGH--ESEGSKPEPIGALAGQHIVHVACGESHSVA 98
Query: 125 VTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVSE-VTATACGADFTVWLSSVEGA 182
+++ G ++G GQLG +I + + P ++ L + + +CG + L++ +G
Sbjct: 99 LSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAA-DG- 156
Query: 183 SILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTV 242
G YGQLG G + +Q P+ + +L G + +VA G H+
Sbjct: 157 QFFTWGQNSYGQLGLGKE-------------CPSQASPQRVKSLDGIPLAQVAAGGAHSF 203
Query: 243 AVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL------PPEAVIS-AGSV 295
A+ G V+ WG G+LG +++D P V + + V+ AV++ +G V
Sbjct: 204 ALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGV 263
Query: 296 NSSCTAGGGQLYMWGKLKNNG-DDWMYPKPLMDLSGWNLRCMDSGNMHH---FVGADSSC 351
T G G G+L ++ +D + P+ +++L G + + G HH FV +
Sbjct: 264 ---FTFGAGSC---GQLGHDSMNDEVNPRRVLELMGSEVSQIACGR-HHTLAFVPSSGMI 316
Query: 352 ISWGHAQYGELGYG 365
++G G+LG G
Sbjct: 317 YAFGCGTRGQLGTG 330
Score = 223 (83.6 bits), Expect = 3.5e-15, P = 3.5e-15
Identities = 68/232 (29%), Positives = 105/232 (45%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGD-KIQRDRPTIVS 105
P + L G I VA G H VA+ +G+ ++WG GQLG + P ++
Sbjct: 75 PEPIGALAGQHIVHVACG--ESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIK 132
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSPVRCLVS-EV 163
+L++ I + G H + + DG +G N +GQLG G ++ P V+ L +
Sbjct: 133 KLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPL 192
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
A G + LS + GA + G GQLG + + ++S P +
Sbjct: 193 AQVAAGGAHSFALS-LSGA-VFGWGKNSSGQLGLSDERD---RES-----------PCHV 236
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
L + +V ++CG HT + G V+T+G G G+LGH DE PRRV
Sbjct: 237 KLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288
Score = 135 (52.6 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 36/113 (31%), Positives = 51/113 (45%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
SP ++ L + +++ G H + G +T+G GQLGH P V
Sbjct: 232 SPCHVKLLRSQKVVYISCG--EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL 289
Query: 106 ELSKYKIKKAGAGRSHTVV-VTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
EL ++ + GR HT+ V G AFG GQLG+G N PSPV+
Sbjct: 290 ELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVK 342
>TAIR|locus:2144291 [details] [associations]
symbol:AT5G11580 "AT5G11580" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008536 "Ran GTPase binding" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 HSSP:P18754 EMBL:AY058861 EMBL:AY079040
IPI:IPI00537184 RefSeq:NP_568250.1 UniGene:At.5137 UniGene:At.75215
ProteinModelPortal:Q93Z10 SMR:Q93Z10 PRIDE:Q93Z10
EnsemblPlants:AT5G11580.1 GeneID:831030 KEGG:ath:AT5G11580
TAIR:At5g11580 InParanoid:Q93Z10 OMA:WTFGLGD PhylomeDB:Q93Z10
ProtClustDB:CLSN2689608 Genevestigator:Q93Z10 Uniprot:Q93Z10
Length = 553
Score = 217 (81.4 bits), Expect = 3.2e-17, Sum P(2) = 3.2e-17
Identities = 69/265 (26%), Positives = 124/265 (46%)
Query: 46 SPTRLRPLVGVDI--RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTI 103
SPT L + D+ + ++ H +A+ +G Y+WGR G+LG G + P +
Sbjct: 5 SPTLL---ISEDLSRKIISLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDELVPVL 61
Query: 104 V-----SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
V +E + +I AG H++ V++DG+ +G+N +GQLG N + P ++
Sbjct: 62 VEFPNQAEGDRIRIVGVAAGAYHSLAVSDDGSVWCWGYNIYGQLGFDG-ENSLAPCLIKN 120
Query: 159 LVSEVTATAC--------GADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSV 210
L T+++ G+D V +V+ S+++ + G L + +
Sbjct: 121 LFERETSSSSLNDSGREVGSDLKV--CTVKAGSMMSLAIDNVGGLWMWGNVPPQDSEPDP 178
Query: 211 KLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG-------Y----VYTWGFGGYG 259
+L++ + P P I G T++KVACG H VA+ G Y +Y+WG +G
Sbjct: 179 RLSFTSIPIPFPILDFHGRTVLKVACGDEHVVALVGPGDIHKDNSYDVSVLYSWGNNHHG 238
Query: 260 RLGHREQKDEWVPRRVDVFQRNNVL 284
+LG + + P+ V+ F + + L
Sbjct: 239 QLGLGDGESRARPQTVETFNQKSGL 263
Score = 187 (70.9 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 69/219 (31%), Positives = 102/219 (46%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIV---SELSKYKIKKAGAGRSHTVVVT-----EDGNS 131
Y+WG N GQLG GD R RP V ++ S + G HT ++T G S
Sbjct: 230 YSWGNNHHGQLGLGDGESRARPQTVETFNQKSGLTVYDIACGAHHTALLTYRKETPKGPS 289
Query: 132 LA--FGWNKHGQLGSGSIRNEIEPSPVRCLVSE--VTATACGADFTVWLSSVEGASILNA 187
+ FG+ ++GQLG S ++ P PV L + + CG T +SS EG + +
Sbjct: 290 ICWTFGFGENGQLGHRSNKSSSLPEPVSDLPEHAYLVSVDCGLFHTSVVSS-EGY-VWSW 347
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G+ + G G + N + V+ ++ PR + + V+V+CG HTV V
Sbjct: 348 GMER----GLGLCPDVNFTE--VEAGDDSVPRKISGGSSRFRDPVQVSCGAAHTVLVVDG 401
Query: 248 GY-VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
GY +++WG G G LG D +VP V F N + P
Sbjct: 402 GYKLWSWGRGRNGVLGTGNVSDCYVPTLV--FWPNELKP 438
Score = 174 (66.3 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 80/293 (27%), Positives = 121/293 (41%)
Query: 54 VGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGD-KIQRDR---PTIVSELSK 109
VG D++ S +A+D G + WG N Q D ++ P + +
Sbjct: 138 VGSDLKVCTVKAGSMMSLAIDNVGGLWMWG-NVPPQDSEPDPRLSFTSIPIPFPILDFHG 196
Query: 110 YKIKKAGAGRSHTVVVTEDGN---------SLAFGW--NKHGQLGSGSIRNEIEPSPVRC 158
+ K G H V + G+ S+ + W N HGQLG G + P V
Sbjct: 197 RTVLKVACGDEHVVALVGPGDIHKDNSYDVSVLYSWGNNHHGQLGLGDGESRARPQTVET 256
Query: 159 LVSEVTAT----ACGADFTVWLS----SVEGASIL-NAGLPQYGQLGHGTDNEYNTKDSS 209
+ T ACGA T L+ + +G SI G + GQLGH ++ K SS
Sbjct: 257 FNQKSGLTVYDIACGAHHTALLTYRKETPKGPSICWTFGFGENGQLGHRSN-----KSSS 311
Query: 210 VKLAYEAQPRPRAIAALAGET-IVKVACGTNHTVAVDSKGYVYTWGFG-GYG-----RLG 262
+ P P ++ L +V V CG HT V S+GYV++WG G G
Sbjct: 312 L-------PEP--VSDLPEHAYLVSVDCGLFHTSVVSSEGYVWSWGMERGLGLCPDVNFT 362
Query: 263 HREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG-QLYMWGKLKN 314
E D+ VPR++ P + +S G+ ++ GG +L+ WG+ +N
Sbjct: 363 EVEAGDDSVPRKISGGSSRFRDPVQ--VSCGAAHTVLVVDGGYKLWSWGRGRN 413
Score = 128 (50.1 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 28/81 (34%), Positives = 45/81 (55%)
Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV- 289
I+ +A G HT+A+ G VY+WG G +GRLG ++ DE VP V+ + V
Sbjct: 18 IISLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDELVPVLVEFPNQAEGDRIRIVG 77
Query: 290 ISAGSVNSSCTAGGGQLYMWG 310
++AG+ +S + G ++ WG
Sbjct: 78 VAAGAYHSLAVSDDGSVWCWG 98
Score = 86 (35.3 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 339 GNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILE---GMHVISVACGYG 394
G++H D S + SWG+ +G+LG G G+ S A P+ V+ G+ V +ACG
Sbjct: 216 GDIHKDNSYDVSVLYSWGNNHHGQLGLGD-GE-SRARPQTVETFNQKSGLTVYDIACGAH 273
Query: 395 HSLVIVDR 402
H+ ++ R
Sbjct: 274 HTALLTYR 281
Score = 62 (26.9 bits), Expect = 3.2e-17, Sum P(2) = 3.2e-17
Identities = 28/114 (24%), Positives = 48/114 (42%)
Query: 297 SSC-TAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWN-LRCMDSGNMHHFVGADSSCI-S 353
S C T G G+ G N P+P+ DL L +D G H V + + S
Sbjct: 289 SICWTFGFGENGQLGHRSNKSSS--LPEPVSDLPEHAYLVSVDCGLFHTSVVSSEGYVWS 346
Query: 354 WGHAQ-YG---ELGYGPYGQKSSAMPKKVD--ILEGMHVISVACGYGHSLVIVD 401
WG + G ++ + ++P+K+ + V+CG H++++VD
Sbjct: 347 WGMERGLGLCPDVNFTEVEAGDDSVPRKISGGSSRFRDPVQVSCGAAHTVLVVD 400
Score = 43 (20.2 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 372 SAMPKKVDILE--GMHVISVACGYGHSLVIV 400
+++P IL+ G V+ VACG H + +V
Sbjct: 183 TSIPIPFPILDFHGRTVLKVACGDEHVVALV 213
>UNIPROTKB|E1B8U7 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
OMA:ERPGAWF GeneTree:ENSGT00700000104312 EMBL:DAAA02052163
IPI:IPI00710464 UniGene:Bt.111664 Ensembl:ENSBTAT00000024803
NextBio:20875558 Uniprot:E1B8U7
Length = 377
Score = 156 (60.0 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 56/197 (28%), Positives = 85/197 (43%)
Query: 213 AYEAQPRPRAIAALAGETIVK-VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV 271
AY PRP LA + + G H + +D+ G V++WG G +G+LGH + E
Sbjct: 143 AY-VSPRPPFYRPLAPTLRARRLELGAEHALLLDAAGQVFSWGAGRHGQLGHGTLEAEPE 201
Query: 272 PRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGW 331
PR ++ Q + A ++AG +S C + G +Y+WG N P + G
Sbjct: 202 PRLLEALQGLRM----AEVAAGGWHSVCLSETGDIYIWGW--NESGQLALPTKSLAEDGK 255
Query: 332 NLRCMDSGNMHHFVGADSSCISWGHAQYGELGY-GPYGQKSSAMPKKVDILEGMHVISVA 390
SG + D S + G A GE G P+ P +D+ G + V+
Sbjct: 256 TTAGEASG-----LEEDGSEVKRGSA--GEDGAPAPF-IAVQPFPALLDLSPGSEAVKVS 307
Query: 391 CGYGHSLVIVDRTNVGE 407
CG H+ V+ T GE
Sbjct: 308 CGSRHTAVL---TRTGE 321
Score = 144 (55.7 bits), Expect = 3.9e-17, Sum P(2) = 3.9e-17
Identities = 25/74 (33%), Positives = 41/74 (55%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H + +D G+ ++WG GQLGHG P ++ L ++ + AG H+V ++E
Sbjct: 170 HALLLDAAGQVFSWGAGRHGQLGHGTLEAEPEPRLLEALQGLRMAEVAAGGWHSVCLSET 229
Query: 129 GNSLAFGWNKHGQL 142
G+ +GWN+ GQL
Sbjct: 230 GDIYIWGWNESGQL 243
Score = 137 (53.3 bits), Expect = 3.9e-17, Sum P(2) = 3.9e-17
Identities = 26/62 (41%), Positives = 36/62 (58%)
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
QP P + G VKV+CG+ HT + G +YTWG+G YG+LGH++ P RV+
Sbjct: 289 QPFPALLDLSPGSEAVKVSCGSRHTAVLTRTGELYTWGWGKYGQLGHKDTTTLDRPCRVE 348
Query: 277 VF 278
F
Sbjct: 349 YF 350
Score = 114 (45.2 bits), Expect = 8.7e-06, Sum P(3) = 8.7e-06
Identities = 30/93 (32%), Positives = 46/93 (49%)
Query: 169 GADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAG 228
GA+ + L + + + G ++GQLGHGT EA+P PR + AL G
Sbjct: 167 GAEHALLLDAA--GQVFSWGAGRHGQLGHGT--------------LEAEPEPRLLEALQG 210
Query: 229 ETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRL 261
+ +VA G H+V + G +Y WG+ G+L
Sbjct: 211 LRMAEVAAGGWHSVCLSETGDIYIWGWNESGQL 243
Score = 87 (35.7 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 28/98 (28%), Positives = 44/98 (44%)
Query: 100 RPTIVSELSK-YKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
RP L+ + ++ G H +++ G ++G +HGQLG G++ E EP +
Sbjct: 148 RPPFYRPLAPTLRARRLELGAEHALLLDAAGQVFSWGAGRHGQLGHGTLEAEPEPRLLEA 207
Query: 159 LVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
L + A G +V LS E I G + GQL
Sbjct: 208 LQGLRMAEVAAGGWHSVCLS--ETGDIYIWGWNESGQL 243
Score = 50 (22.7 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 287 EAV-ISAGSVNSSCTAGGGQLYMWG 310
EAV +S GS +++ G+LY WG
Sbjct: 302 EAVKVSCGSRHTAVLTRTGELYTWG 326
Score = 46 (21.3 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 13/30 (43%), Positives = 15/30 (50%)
Query: 129 GNSLAFGWNKHGQ-LGSGSIRNEIEPSPVR 157
G FG+ GQ LGSG R P P+R
Sbjct: 7 GTWFGFGFCGFGQALGSGLGRQVHSPEPLR 36
>UNIPROTKB|G3V2I3 [details] [associations]
symbol:RCCD1 "RCC1 domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 EMBL:AC068831 HGNC:HGNC:30457
ProteinModelPortal:G3V2I3 SMR:G3V2I3 Ensembl:ENST00000555155
ArrayExpress:G3V2I3 Bgee:G3V2I3 Uniprot:G3V2I3
Length = 374
Score = 142 (55.0 bits), Expect = 4.0e-17, Sum P(2) = 4.0e-17
Identities = 27/62 (43%), Positives = 35/62 (56%)
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
QP P + G VK +CG+ HT V G +YTWG+G YG+LGH + PRRV+
Sbjct: 286 QPFPALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVE 345
Query: 277 VF 278
F
Sbjct: 346 YF 347
Score = 139 (54.0 bits), Expect = 4.0e-17, Sum P(2) = 4.0e-17
Identities = 26/74 (35%), Positives = 40/74 (54%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H + +D G+ ++WG GQLGHG P ++ L + + AG H+V V+E
Sbjct: 169 HALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAGGWHSVCVSET 228
Query: 129 GNSLAFGWNKHGQL 142
G+ +GWN+ GQL
Sbjct: 229 GDIYIWGWNESGQL 242
Score = 134 (52.2 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 52/197 (26%), Positives = 84/197 (42%)
Query: 213 AYEAQPRPRAIAALAGETIVK-VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV 271
AY PR LA E + + G H + +D+ G V++WG G +G+LGH + E
Sbjct: 142 AY-VSPRAPFYRPLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELE 200
Query: 272 PRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGW 331
PR ++ Q V+ A ++AG +S C + G +Y+WG N P + G
Sbjct: 201 PRLLEALQ-GLVM---AEVAAGGWHSVCVSETGDIYIWGW--NESGQLALPTRNLAEDGE 254
Query: 332 NLRCMDSGNMHHFVGADSSCIS-WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVA 390
+ + + D S + G A+ G P+ P +D+ G + +
Sbjct: 255 TVAREE-------LNEDGSQVKRTGGAEDG--APAPF-IAVQPFPALLDLPMGSDAVKAS 304
Query: 391 CGYGHSLVIVDRTNVGE 407
CG H+ V+ T GE
Sbjct: 305 CGSRHTAVV---TRTGE 318
Score = 95 (38.5 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 28/85 (32%), Positives = 41/85 (48%)
Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA-TACGADFTVWL 176
G H +++ G ++G +HGQLG G++ E+EP + L V A A G +V +
Sbjct: 166 GAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAGGWHSVCV 225
Query: 177 SSVEGASILNAGLPQYGQLGHGTDN 201
S E I G + GQL T N
Sbjct: 226 S--ETGDIYIWGWNESGQLALPTRN 248
Score = 49 (22.3 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 17/72 (23%), Positives = 30/72 (41%)
Query: 161 SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
S+ +CG+ T ++ + G +YGQLGH D + V+ + Q +
Sbjct: 298 SDAVKASCGSRHTAVVTRT--GELYTWGWGKYGQLGH-EDTTSLDRPRRVEYFVDKQLQV 354
Query: 221 RAIAALAGETIV 232
+A+ T V
Sbjct: 355 KAVTCGPWNTYV 366
Score = 44 (20.5 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 291 SAGSVNSSCTAGGGQLYMWG 310
S GS +++ G+LY WG
Sbjct: 304 SCGSRHTAVVTRTGELYTWG 323
>UNIPROTKB|A6NED2 [details] [associations]
symbol:RCCD1 "RCC1 domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:CH471101 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 EMBL:AC068831
EMBL:BC113826 EMBL:BC140708 EMBL:BC140709 IPI:IPI00399158
RefSeq:NP_001017919.1 RefSeq:NP_291022.2 UniGene:Hs.655895
ProteinModelPortal:A6NED2 SMR:A6NED2 STRING:A6NED2
PhosphoSite:A6NED2 PaxDb:A6NED2 PRIDE:A6NED2
Ensembl:ENST00000394258 Ensembl:ENST00000556618 GeneID:91433
KEGG:hsa:91433 UCSC:uc002bqj.3 CTD:91433 GeneCards:GC15P091498
HGNC:HGNC:30457 HPA:HPA039683 HPA:HPA040776 neXtProt:NX_A6NED2
PharmGKB:PA142671092 eggNOG:NOG305770 HOGENOM:HOG000154085
HOVERGEN:HBG061852 InParanoid:A6NED2 OMA:ERPGAWF OrthoDB:EOG41NTMF
PhylomeDB:A6NED2 GenomeRNAi:91433 NextBio:77244 ArrayExpress:A6NED2
Bgee:A6NED2 CleanEx:HS_RCCD1 Genevestigator:A6NED2 Uniprot:A6NED2
Length = 376
Score = 142 (55.0 bits), Expect = 4.1e-17, Sum P(2) = 4.1e-17
Identities = 27/62 (43%), Positives = 35/62 (56%)
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
QP P + G VK +CG+ HT V G +YTWG+G YG+LGH + PRRV+
Sbjct: 288 QPFPALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVE 347
Query: 277 VF 278
F
Sbjct: 348 YF 349
Score = 139 (54.0 bits), Expect = 4.1e-17, Sum P(2) = 4.1e-17
Identities = 26/74 (35%), Positives = 40/74 (54%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H + +D G+ ++WG GQLGHG P ++ L + + AG H+V V+E
Sbjct: 169 HALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAGGWHSVCVSET 228
Query: 129 GNSLAFGWNKHGQL 142
G+ +GWN+ GQL
Sbjct: 229 GDIYIWGWNESGQL 242
Score = 138 (53.6 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 52/197 (26%), Positives = 86/197 (43%)
Query: 213 AYEAQPRPRAIAALAGETIVK-VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV 271
AY PR LA E + + G H + +D+ G V++WG G +G+LGH + E
Sbjct: 142 AY-VSPRAPFYRPLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELE 200
Query: 272 PRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGW 331
PR ++ Q V+ A ++AG +S C + G +Y+WG N P + G
Sbjct: 201 PRLLEALQ-GLVM---AEVAAGGWHSVCVSETGDIYIWGW--NESGQLALPTRNLAEDGE 254
Query: 332 NLRCMDSGNMHHFVGADSSCIS-WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVA 390
+ ++ ++ D S + G A+ G P+ P +D+ G + +
Sbjct: 255 TV-AREATELNE----DGSQVKRTGGAEDG--APAPF-IAVQPFPALLDLPMGSDAVKAS 306
Query: 391 CGYGHSLVIVDRTNVGE 407
CG H+ V+ T GE
Sbjct: 307 CGSRHTAVV---TRTGE 320
Score = 95 (38.5 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 28/85 (32%), Positives = 41/85 (48%)
Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA-TACGADFTVWL 176
G H +++ G ++G +HGQLG G++ E+EP + L V A A G +V +
Sbjct: 166 GAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAGGWHSVCV 225
Query: 177 SSVEGASILNAGLPQYGQLGHGTDN 201
S E I G + GQL T N
Sbjct: 226 S--ETGDIYIWGWNESGQLALPTRN 248
Score = 44 (20.5 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 291 SAGSVNSSCTAGGGQLYMWG 310
S GS +++ G+LY WG
Sbjct: 306 SCGSRHTAVVTRTGELYTWG 325
>UNIPROTKB|E2QZC2 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
Ensembl:ENSCAFT00000029828 Uniprot:E2QZC2
Length = 701
Score = 237 (88.5 bits), Expect = 4.6e-17, P = 4.6e-17
Identities = 70/242 (28%), Positives = 118/242 (48%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G+L+ ++ PT + L+G ++ V C + H +A+ E + WGR + G+LG G +
Sbjct: 435 GSLN-DISQPTIVEALLGYEM--VQVACGASHVLALSTERELFAWGRGDGGRLGLGTRES 491
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
P VS + ++ G ++++T G +LA G N+ +LG + EP+P +
Sbjct: 492 HSCPQQVSMPPGQEAQRVVCGIDSSMILTVPGRALACGSNRFNKLGLDRLSLGEEPAPNQ 551
Query: 158 CLVSEVTATACG-ADFTVW-LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
+ ++ T G A F L SV+ + +A + G N++ ++ +
Sbjct: 552 QVEEALSFTPLGSAPFDREPLLSVDLGTAHSAAVTASGDCYTFGSNQHGQLGTNARRVSR 611
Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
A P + L I VACG TVAV ++G VY+WG G GRLG R++ D +PR V
Sbjct: 612 A---PCQVQGLQNIKIAMVACGDAFTVAVGAEGEVYSWGKGARGRLGRRDE-DAGLPRPV 667
Query: 276 DV 277
+
Sbjct: 668 QL 669
Score = 227 (85.0 bits), Expect = 6.5e-16, P = 6.5e-16
Identities = 77/279 (27%), Positives = 123/279 (44%)
Query: 55 GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK 114
GV I+ VA G + C+ D G T+G G LGHG +PTIV L Y++ +
Sbjct: 399 GVTIKHVACGDLFTACLT-D-RGIIMTFGSGSNGCLGHGSLNDISQPTIVEALLGYEMVQ 456
Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFT 173
G SH + ++ + A+G G+LG G+ + P V E CG D +
Sbjct: 457 VACGASHVLALSTERELFAWGRGDGGRLGLGTRESHSCPQQVSMPPGQEAQRVVCGIDSS 516
Query: 174 VWLSSVEGASILNAGLPQYGQLGHG--TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
+ L+ V G + L G ++ +LG + E + V+ A P A E +
Sbjct: 517 MILT-VPGRA-LACGSNRFNKLGLDRLSLGEEPAPNQQVEEALSFTPL--GSAPFDREPL 572
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
+ V GT H+ AV + G YT+G +G+LG ++ P +V Q + A+++
Sbjct: 573 LSVDLGTAHSAAVTASGDCYTFGSNQHGQLGTNARRVSRAPCQVQGLQNIKI----AMVA 628
Query: 292 AGSVNSSCTAGGGQLYMWGK-----LKNNGDDWMYPKPL 325
G + G++Y WGK L +D P+P+
Sbjct: 629 CGDAFTVAVGAEGEVYSWGKGARGRLGRRDEDAGLPRPV 667
Score = 94 (38.1 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 29/100 (29%), Positives = 47/100 (47%)
Query: 215 EAQPR--PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
+ QP+ R + +G TI VACG T + +G + T+G G G LGH D P
Sbjct: 384 QQQPQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQP 443
Query: 273 RRVDVFQRNNVLPPEAV-ISAGSVNSSCTAGGGQLYMWGK 311
V+ +L E V ++ G+ + + +L+ WG+
Sbjct: 444 TIVEA-----LLGYEMVQVACGASHVLALSTERELFAWGR 478
Score = 77 (32.2 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 20/68 (29%), Positives = 34/68 (50%)
Query: 333 LRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVAC 391
L +D G H V A C ++G Q+G+LG ++ S P +V L+ + + VAC
Sbjct: 572 LLSVDLGTAHSAAVTASGDCYTFGSNQHGQLGTN--ARRVSRAPCQVQGLQNIKIAMVAC 629
Query: 392 GYGHSLVI 399
G ++ +
Sbjct: 630 GDAFTVAV 637
>UNIPROTKB|F1RMH6 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
OMA:ERPGAWF GeneTree:ENSGT00700000104312 EMBL:CT868688
Ensembl:ENSSSCT00000002041 Uniprot:F1RMH6
Length = 382
Score = 160 (61.4 bits), Expect = 7.1e-09, P = 7.1e-09
Identities = 78/326 (23%), Positives = 132/326 (40%)
Query: 91 GHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNE 150
G G ++ P V S + + A S+T VT G L + G +G R+
Sbjct: 24 GRGRQVYSPEPLEVPGAS-LDVCRVSASWSYTATVTRGGR-LELSGSVSGS--AGGCRDA 79
Query: 151 IEPSPVRCLVSEVTATACGADFTVWL--SSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
+ ++ T + GA+ W SS+ G + + + G + T+
Sbjct: 80 WASEALLVVLRAGTGSDSGAELQAWAPGSSLRGEPLWAQTVVLEVERKDGPGGD-ETQAG 138
Query: 209 SVKL-----AYEAQPRPRAIAALAGETIVK-VACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
+ L AY P+P LA + + G H + +D+ G V++WG G +G+LG
Sbjct: 139 PLPLLPCASAY-VSPQPPFYRPLAPTLRARRLELGAEHALLLDAAGQVFSWGGGRHGQLG 197
Query: 263 HREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYP 322
H + E PR ++ Q P A ++AG +S C + G +Y+WG N P
Sbjct: 198 HGTLEAEREPRVLEALQGL----PMAEVAAGGWHSVCVSETGDIYIWGW--NESGQLALP 251
Query: 323 KPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKS-SAMPKKVDIL 381
+ G + D+ ++ G+++ A GE G GP + P +D+
Sbjct: 252 ARSLAEDGKTITG-DAPGLNED-GSEAK-----RATEGEDG-GPTPFIAVQPFPALLDLP 303
Query: 382 EGMHVISVACGYGHSLVIVDRTNVGE 407
G + +CG H+ V+ T GE
Sbjct: 304 LGSDAVKASCGSRHTAVV---TRTGE 326
Score = 143 (55.4 bits), Expect = 5.4e-17, Sum P(2) = 5.4e-17
Identities = 26/74 (35%), Positives = 40/74 (54%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H + +D G+ ++WG GQLGHG P ++ L + + AG H+V V+E
Sbjct: 175 HALLLDAAGQVFSWGGGRHGQLGHGTLEAEREPRVLEALQGLPMAEVAAGGWHSVCVSET 234
Query: 129 GNSLAFGWNKHGQL 142
G+ +GWN+ GQL
Sbjct: 235 GDIYIWGWNESGQL 248
Score = 137 (53.3 bits), Expect = 5.4e-17, Sum P(2) = 5.4e-17
Identities = 31/102 (30%), Positives = 43/102 (42%)
Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC 236
S E + P + G +D QP P + G VK +C
Sbjct: 254 SLAEDGKTITGDAPGLNEDGSEAKRATEGEDGGPTPFIAVQPFPALLDLPLGSDAVKASC 313
Query: 237 GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
G+ HT V G +YTWG+G YG+LGH++ P RV+ F
Sbjct: 314 GSRHTAVVTRTGELYTWGWGKYGQLGHKDTTSLDRPCRVEYF 355
>MGI|MGI:1914388 [details] [associations]
symbol:Herc6 "hect domain and RLD 6" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;IBA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=ISO;IBA] [GO:0006464 "cellular protein modification
process" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0030332 "cyclin binding" evidence=ISO] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IBA] [GO:0045087 "innate immune response"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 MGI:MGI:1914388 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 GO:GO:0005634 GO:GO:0005737 GO:GO:0045087
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0042787 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
CTD:55008 OMA:HIFAGTY EMBL:AC127307 EMBL:AC142212 EMBL:AK017888
EMBL:AK149648 IPI:IPI00850197 RefSeq:NP_080268.1 UniGene:Mm.297393
ProteinModelPortal:F2Z461 SMR:F2Z461 PRIDE:F2Z461
Ensembl:ENSMUST00000031817 GeneID:67138 KEGG:mmu:67138
ChiTaRS:HERC6 NextBio:323692 Bgee:F2Z461 Uniprot:F2Z461
Length = 1003
Score = 238 (88.8 bits), Expect = 6.3e-17, P = 6.3e-17
Identities = 72/255 (28%), Positives = 121/255 (47%)
Query: 25 CGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGR 84
CG W +G+R+ D + P ++ L + + V+ G H VAV +G+ + WG
Sbjct: 46 CGDNSWGQLGQRR---DQSTERPEPIQALNDLHVDLVSCG--KEHSVAVCHKGKVFAWGA 100
Query: 85 NERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG 143
GQLG G+ K PT + L+ KI + G H++ ++EDG+ ++G N GQLG
Sbjct: 101 GSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLG 160
Query: 144 SG-SIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDN 201
G + R++ P V+ L + A G + LS + G S G + GQL
Sbjct: 161 LGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALS-LTGTSF-GWGSNRSGQLA----- 213
Query: 202 EYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRL 261
+ VK E +P +I AL +++ ++CG HT + +G V+T+G G+L
Sbjct: 214 ---LSGNKVK---EQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQL 267
Query: 262 GHREQKDEWVPRRVD 276
+ + P+ ++
Sbjct: 268 QPSPRSGQRGPQLIE 282
Score = 203 (76.5 bits), Expect = 5.8e-13, P = 5.8e-13
Identities = 54/201 (26%), Positives = 92/201 (45%)
Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD-EWVPR 273
++ RP I AL + V+CG H+VAV KG V+ WG G G+LG E K+ ++P
Sbjct: 60 QSTERPEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPT 119
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLM 326
++ ++ +S G +S + G ++ WG+ L N P+ +
Sbjct: 120 KIKALAGIKIIQ----VSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVK 175
Query: 327 DLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGY-GPYGQKSSAMPKKVDILEGM 384
L G L + +G H F + + WG + G+L G ++ P + L+ +
Sbjct: 176 SLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNL 235
Query: 385 HVISVACGYGHSLVIVDRTNV 405
VI ++CGY H+ V+ + V
Sbjct: 236 SVIYISCGYEHTAVLTEEGQV 256
Score = 202 (76.2 bits), Expect = 7.5e-13, P = 7.5e-13
Identities = 66/270 (24%), Positives = 120/270 (44%)
Query: 47 PTRLRP-LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
P RL+ G+++ A+G H + + R Y+ G N GQLG +RP +
Sbjct: 12 PRRLKAGTSGIELLQAASG--EHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQ 69
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN-EIEPSPVRCLVS-EV 163
L+ + G+ H+V V G A+G GQLG G + P+ ++ L ++
Sbjct: 70 ALNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKI 129
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
+CG ++ LS E + + G GQLG G N++ ++ P+ +
Sbjct: 130 IQVSCGHYHSLALS--EDGHVFSWGRNSEGQLGLGK----NSRSQAI---------PQKV 174
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRL---GHREQKDEWVPRRVDVFQR 280
+L G + +VA G H+ A+ G + WG G+L G++ ++ + P + +
Sbjct: 175 KSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKN 234
Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+V+ IS G +++ GQ++ +G
Sbjct: 235 LSVI----YISCGYEHTAVLTEEGQVFTFG 260
Score = 172 (65.6 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 53/191 (27%), Positives = 90/191 (47%)
Query: 219 RPRAI-AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
+PR + A +G +++ A G +H++ + S VY+ G +G+LG R + R +
Sbjct: 11 KPRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQST---ERPEP 67
Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GD----DWMYPKPLMDLS 329
Q N L + ++S G +S G+++ WG G+ +M P + L+
Sbjct: 68 IQALNDLHVD-LVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFM-PTKIKALA 125
Query: 330 GWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVIS 388
G + + G+ H + D SWG G+LG G +S A+P+KV LEG+ +
Sbjct: 126 GIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGK-NSRSQAIPQKVKSLEGIPLAQ 184
Query: 389 VACGYGHSLVI 399
VA G HS +
Sbjct: 185 VAAGGTHSFAL 195
Score = 166 (63.5 bits), Expect = 7.4e-09, P = 7.4e-09
Identities = 58/214 (27%), Positives = 100/214 (46%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR--PTIV 104
PT+++ L G+ I + C H +A+ +G ++WGRN GQLG G K R + P V
Sbjct: 118 PTKIKALAGIKI--IQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLG-KNSRSQAIPQKV 174
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGS-IRNEI-EPSPVRCLVS 161
L + + AG +H+ ++ G S +G N+ GQL SG+ ++ +I +P + L
Sbjct: 175 KSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGAL-K 233
Query: 162 EVTATACGADFTVWLS-SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
++ +++S E ++L + GQ+ N S + Q P
Sbjct: 234 NLSV--------IYISCGYEHTAVLT----EEGQVFTFGGNSSGQLQPSPR---SGQRGP 278
Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
+ I + G + ++ C + HT+A YVYT G
Sbjct: 279 QLIEGIGGR-VSQIECASYHTIA-----YVYTTG 306
Score = 126 (49.4 bits), Expect = 0.00018, P = 0.00018
Identities = 30/99 (30%), Positives = 50/99 (50%)
Query: 309 WGKLKNNGDDWMY-PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGP 366
WG+L D P+P+ L+ ++ + G H V +WG G+LG G
Sbjct: 51 WGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGE 110
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
+ ++ S MP K+ L G+ +I V+CG+ HSL + + +V
Sbjct: 111 F-KEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHV 148
>TAIR|locus:2156233 [details] [associations]
symbol:RUG2 "RCC1/UVR8/GEF-like 2" species:3702
"Arabidopsis thaliana" [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0008150 "biological_process" evidence=ND] INTERPRO:IPR000408
Pfam:PF00415 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
HSSP:P18754 EMBL:BT005508 EMBL:AK117526 IPI:IPI00527447
RefSeq:NP_199644.2 UniGene:At.29855 ProteinModelPortal:Q8GYL6
SMR:Q8GYL6 PRIDE:Q8GYL6 EnsemblPlants:AT5G48330.1 GeneID:834886
KEGG:ath:AT5G48330 TAIR:At5g48330 HOGENOM:HOG000238877
InParanoid:Q8GYL6 OMA:SAGHYHS PhylomeDB:Q8GYL6
ProtClustDB:CLSN2680477 ArrayExpress:Q8GYL6 Genevestigator:Q8GYL6
Uniprot:Q8GYL6
Length = 455
Score = 150 (57.9 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 54/167 (32%), Positives = 73/167 (43%)
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRNEIEPSPV 156
PT+VS L I AG H++ VT G A+G N GQLG S + EP V
Sbjct: 74 PTVVSNLPS-DISSISAGHYHSLAVTSSGEIWAWGRNDEGQLGRIVIDSSRDSRSEPKRV 132
Query: 157 RCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
L V A A V + + S+ G + GQLG G EA
Sbjct: 133 EGL-ENVNVQAAFASGVVSAAIGDDGSLWVWGRSKRGQLGLGNG------------IIEA 179
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
+ P + LA E +VKV+ G H +A+ G V+ WG+ GR+G+
Sbjct: 180 RV-PSRVENLAAEHVVKVSLGWGHALALTVDGKVFGWGYVADGRVGN 225
Score = 146 (56.5 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 48/168 (28%), Positives = 81/168 (48%)
Query: 250 VYTWGFGGYGRLGHREQKDEWVPRR-VDVFQRNNV--LPPE-AVISAGSVNSSCTAGGGQ 305
V ++G G G LG +P +D ++ V LP + + ISAG +S G+
Sbjct: 46 VMSFGDGNLGALGLSSSS---IPGMGMDAYEPTVVSNLPSDISSISAGHYHSLAVTSSGE 102
Query: 306 LYMWGK----------LKNNGDDWMYPKPLMDLSGWNLRC-MDSGNMHHFVGADSSCISW 354
++ WG+ + ++ D PK + L N++ SG + +G D S W
Sbjct: 103 IWAWGRNDEGQLGRIVIDSSRDSRSEPKRVEGLENVNVQAAFASGVVSAAIGDDGSLWVW 162
Query: 355 GHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI-VD 401
G ++ G+LG G G + +P +V+ L HV+ V+ G+GH+L + VD
Sbjct: 163 GRSKRGQLGLGN-GIIEARVPSRVENLAAEHVVKVSLGWGHALALTVD 209
Score = 142 (55.0 bits), Expect = 6.5e-17, Sum P(2) = 6.5e-17
Identities = 55/187 (29%), Positives = 85/187 (45%)
Query: 32 AVGRRKGALDG---NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERG 88
A+G ++ G + PT + L DI ++AG H +AV G + WGRN+ G
Sbjct: 56 ALGLSSSSIPGMGMDAYEPTVVSNLPS-DISSISAG--HYHSLAVTSSGEIWAWGRNDEG 112
Query: 89 QLGH----GDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGS 144
QLG + R P V L ++ A A + + +DG+ +G +K GQLG
Sbjct: 113 QLGRIVIDSSRDSRSEPKRVEGLENVNVQAAFASGVVSAAIGDDGSLWVWGRSKRGQLGL 172
Query: 145 GS-IRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGH-GTDN 201
G+ I PS V L +E V + G + L+ V+G + G G++G+ G
Sbjct: 173 GNGIIEARVPSRVENLAAEHVVKVSLGWGHALALT-VDG-KVFGWGYVADGRVGNVGLPL 230
Query: 202 EYNTKDS 208
E + DS
Sbjct: 231 EASLLDS 237
Score = 140 (54.3 bits), Expect = 6.5e-17, Sum P(2) = 6.5e-17
Identities = 47/204 (23%), Positives = 85/204 (41%)
Query: 202 EYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRL 261
E +K++ + +A+E P + E + +ACG++H++ + G + + G YG+L
Sbjct: 263 EAMSKENDMPIAWE----PCLVEETCNEKVADIACGSDHSLILCHDGTLLSAGSNIYGQL 318
Query: 262 GHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG----KLKNNGD 317
G +Q P VD+ + P G + C G + WG + G
Sbjct: 319 GRSKQDLGMKP--VDITES----PISIAAGLGHSLAICNRGERNILSWGWNRSRQLGRGK 372
Query: 318 DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPK 376
P+ + G + + +G +H V WG + G LG G + P
Sbjct: 373 PENLPREVEGFDGESPASVSAGRVHSLCVTEKGEAWVWGCGKNGRLGLGSSSDEPE--PM 430
Query: 377 KVDILEGMHVISVACGYGHSLVIV 400
++ +EG V+ G+ HSL++V
Sbjct: 431 LLEDVEGC-VLQAVAGFDHSLILV 453
Score = 125 (49.1 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 46/155 (29%), Positives = 64/155 (41%)
Query: 22 LLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
LL GS + +GR K L V T P+ +AAG + E +
Sbjct: 307 LLSAGSNIYGQLGRSKQDLGMKPVDITE-SPIS------IAAGLGHSLAICNRGERNILS 359
Query: 82 WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
WG N QLG G + P V AGR H++ VTE G + +G K+G+
Sbjct: 360 WGWNRSRQLGRGKP--ENLPREVEGFDGESPASVSAGRVHSLCVTEKGEAWVWGCGKNGR 417
Query: 142 LGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWL 176
LG GS +E EP + + V G D ++ L
Sbjct: 418 LGLGSSSDEPEPMLLEDVEGCVLQAVAGFDHSLIL 452
Score = 123 (48.4 bits), Expect = 0.00013, P = 0.00013
Identities = 55/192 (28%), Positives = 81/192 (42%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P + LA E +VKV+ G H +A+ G V+ WG+ GR+G+ +P +
Sbjct: 182 PSRVENLAAEHVVKVSLGWGHALALTVDGKVFGWGYVADGRVGN-----VGLPLEASLLD 236
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMD-- 337
+ +AG +N A + K + W +P + N + D
Sbjct: 237 SITDGSMKGHHAAGDLNLEA-AEKKVVEAMSKENDMPIAW---EPCLVEETCNEKVADIA 292
Query: 338 SGNMHHFVGA-DSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
G+ H + D + +S G YG+LG K K VDI E IS+A G GHS
Sbjct: 293 CGSDHSLILCHDGTLLSAGSNIYGQLGRS----KQDLGMKPVDITESP--ISIAAGLGHS 346
Query: 397 LVIVDRTNVGER 408
L I +R GER
Sbjct: 347 LAICNR---GER 355
Score = 68 (29.0 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 16/55 (29%), Positives = 30/55 (54%)
Query: 348 DSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
+ + +SWG + +LG G K +P++V+ +G SV+ G HSL + ++
Sbjct: 354 ERNILSWGWNRSRQLGRG----KPENLPREVEGFDGESPASVSAGRVHSLCVTEK 404
>UNIPROTKB|E1B827 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072372 "primary cilium" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0072372 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104137 OMA:EREVFAW EMBL:DAAA02048605
EMBL:DAAA02048606 IPI:IPI00700790 Ensembl:ENSBTAT00000020643
Uniprot:E1B827
Length = 698
Score = 235 (87.8 bits), Expect = 7.8e-17, P = 7.8e-17
Identities = 80/279 (28%), Positives = 124/279 (44%)
Query: 55 GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK 114
GV I+ VA G + C+ D G T+G G LGHG +PTIV L Y++ +
Sbjct: 396 GVTIKHVACGDLFTACLT-D-RGIIMTFGSGSNGCLGHGGLNDISQPTIVEALLGYEMVQ 453
Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFT 173
G SH + ++ + A+G G+LG G+ + P V E CG D +
Sbjct: 454 VACGASHVLALSTERELFAWGRGDGGRLGLGTRESHSCPQQVPMPPGQEAQRVICGIDSS 513
Query: 174 VWLSSVEGASILNAGLPQYGQLG--HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
V L+ V G + L G ++ +LG H + E V+ A P A L E +
Sbjct: 514 VILT-VPGQA-LACGSNRFNKLGLDHLSLGEEPALHQQVEEALNFTPL--GSAPLDQEPL 569
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
+ V GT H+ AV + G YT+G +G+LG ++ P +V Q + A+++
Sbjct: 570 LSVDLGTAHSAAVTASGDCYTFGSNQHGQLGTNARRVSRAPCQVQGLQGIKI----AMVA 625
Query: 292 AGSVNSSCTAGGGQLYMWGK-----LKNNGDDWMYPKPL 325
G + G++Y WGK L +D P+P+
Sbjct: 626 CGDAFTVAIGAEGEVYSWGKGARGRLGRRDEDAALPRPV 664
Score = 221 (82.9 bits), Expect = 3.1e-15, P = 3.1e-15
Identities = 68/243 (27%), Positives = 115/243 (47%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G L+ ++ PT + L+G ++ V C + H +A+ E + WGR + G+LG G +
Sbjct: 432 GGLN-DISQPTIVEALLGYEM--VQVACGASHVLALSTERELFAWGRGDGGRLGLGTRES 488
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
P V + ++ G +V++T G +LA G N+ +LG + EP+ +
Sbjct: 489 HSCPQQVPMPPGQEAQRVICGIDSSVILTVPGQALACGSNRFNKLGLDHLSLGEEPALHQ 548
Query: 158 CLVSEVTATACGA---DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
+ + T G+ D LS V+ + +A + G N++ ++ +
Sbjct: 549 QVEEALNFTPLGSAPLDQEPLLS-VDLGTAHSAAVTASGDCYTFGSNQHGQLGTNARRVS 607
Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
A P + L G I VACG TVA+ ++G VY+WG G GRLG R++ D +PR
Sbjct: 608 RA---PCQVQGLQGIKIAMVACGDAFTVAIGAEGEVYSWGKGARGRLGRRDE-DAALPRP 663
Query: 275 VDV 277
V +
Sbjct: 664 VQL 666
Score = 175 (66.7 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 93/343 (27%), Positives = 152/343 (44%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
YTWG G L ++ +V +++ + +KAG RS +++ E L G
Sbjct: 321 YTWG----GGLSAPLRLPMLNTEVV-QVAAGRTQKAGVTRSGRLILWE-APPLGAGG--- 371
Query: 140 GQLGSGSIRNEIEPSPV-RCLVSEVTAT----ACGADFTVWLSSVEGASILNAGLPQYGQ 194
G L G++ + +P V R L + T ACG FT L+ G I+ G G
Sbjct: 372 GALLPGAVEQQ-QPQFVSRFLEGQSGVTIKHVACGDLFTACLTD-RGI-IMTFGSGSNGC 428
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LGHG N+ + +P + AL G +V+VACG +H +A+ ++ ++ WG
Sbjct: 429 LGHGGLNDIS--------------QPTIVEALLGYEMVQVACGASHVLALSTERELFAWG 474
Query: 255 FGGYGRLGHREQKDEWVPRRVDV-----FQR------NNVL--PPEAVISAGSVNSSCTA 301
G GRLG ++ P++V + QR ++V+ P ++ GS N
Sbjct: 475 RGDGGRLGLGTRESHSCPQQVPMPPGQEAQRVICGIDSSVILTVPGQALACGS-NRFNKL 533
Query: 302 GGGQLYMWGK--LKNNGDDWMYPKPL--MDLSGWNLRCMDSGNMHHF-VGADSSCISWGH 356
G L + + L ++ + PL L L +D G H V A C ++G
Sbjct: 534 GLDHLSLGEEPALHQQVEEALNFTPLGSAPLDQEPLLSVDLGTAHSAAVTASGDCYTFGS 593
Query: 357 AQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
Q+G+LG ++ S P +V L+G+ + VACG ++ I
Sbjct: 594 NQHGQLGTN--ARRVSRAPCQVQGLQGIKIAMVACGDAFTVAI 634
Score = 127 (49.8 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 39/127 (30%), Positives = 60/127 (47%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG-HGDKIQRDRPTIV 104
+P PL+ VD+ G + H AV G CYT+G N+ GQLG + ++ R P V
Sbjct: 562 APLDQEPLLSVDL-----G--TAHSAAVTASGDCYTFGSNQHGQLGTNARRVSR-APCQV 613
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-- 162
L KI G + TV + +G ++G G+LG + P PV+ ++
Sbjct: 614 QGLQGIKIAMVACGDAFTVAIGAEGEVYSWGKGARGRLGRRD-EDAALPRPVQLDETQPY 672
Query: 163 -VTATAC 168
VT+ +C
Sbjct: 673 TVTSVSC 679
>RGD|1309901 [details] [associations]
symbol:Rccd1 "RCC1 domain containing 1" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0005886
"plasma membrane" evidence=IEA;ISO] RGD:1309901 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 CTD:91433
OrthoDB:EOG41NTMF GeneTree:ENSGT00700000104312 IPI:IPI00391295
RefSeq:XP_218819.5 UniGene:Rn.225183 Ensembl:ENSRNOT00000029471
GeneID:308760 KEGG:rno:308760 UCSC:RGD:1309901 NextBio:659480
Uniprot:D3ZG92
Length = 378
Score = 141 (54.7 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 26/62 (41%), Positives = 35/62 (56%)
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
QP P + G VK +CG+ HT V G +YTWG+G YG+LGH++ P RV+
Sbjct: 290 QPFPALLDLPLGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSSDQPCRVE 349
Query: 277 VF 278
F
Sbjct: 350 YF 351
Score = 138 (53.6 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 43/160 (26%), Positives = 74/160 (46%)
Query: 159 LVSEVTATACGADFTVWL--SSVEGASI----LNAGLPQYGQLGHGTDNEYNTKDS-SVK 211
LV + + G + W+ S+++G + L +G G+ G++ T
Sbjct: 84 LVVQRNKSGSGTELQAWVPGSALQGEPLWVQNLASGAKAQGEDEPGSEPRMGTLPLLPCA 143
Query: 212 LAYEAQPRPRAIAALAGETIVK-VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
AY P+P LA E V+ + G H + + G V++WG G +G+LGH + E
Sbjct: 144 RAYMT-PQPPFCQPLAPELRVRQLQLGAEHALLLCEAGQVFSWGGGRHGQLGHGSLEAEL 202
Query: 271 VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
PR ++ Q + A ++AG +S C + G +Y+WG
Sbjct: 203 EPRLLEALQGLRM----AEVAAGGWHSVCVSETGDIYIWG 238
Score = 136 (52.9 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 29/89 (32%), Positives = 46/89 (51%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H + + G+ ++WG GQLGHG P ++ L ++ + AG H+V V+E
Sbjct: 172 HALLLCEAGQVFSWGGGRHGQLGHGSLEAELEPRLLEALQGLRMAEVAAGGWHSVCVSET 231
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
G+ +GWN+ GQL + R+ E VR
Sbjct: 232 GDIYIWGWNESGQLALPT-RSGTEKKTVR 259
Score = 109 (43.4 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 27/74 (36%), Positives = 36/74 (48%)
Query: 114 KAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS---EVTATACGA 170
KA G HT VVT G +GW K+GQLG + +P V V EV A CG
Sbjct: 306 KASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSSDQPCRVEYFVERQLEVRAVTCGP 365
Query: 171 DFTVWLSSVEGASI 184
+ ++ +VE +I
Sbjct: 366 -WNTYVYAVERENI 378
Score = 107 (42.7 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 37/118 (31%), Positives = 53/118 (44%)
Query: 148 RNEIEPSPVRC--LVSE--VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEY 203
R + P P C L E V GA+ + L E + + G ++GQLGHG+
Sbjct: 144 RAYMTPQPPFCQPLAPELRVRQLQLGAEHALLLC--EAGQVFSWGGGRHGQLGHGS---- 197
Query: 204 NTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRL 261
EA+ PR + AL G + +VA G H+V V G +Y WG+ G+L
Sbjct: 198 ----------LEAELEPRLLEALQGLRMAEVAAGGWHSVCVSETGDIYIWGWNESGQL 245
Score = 101 (40.6 bits), Expect = 4.8e-13, Sum P(2) = 4.8e-13
Identities = 28/98 (28%), Positives = 48/98 (48%)
Query: 100 RPTIVSELS-KYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
+P L+ + ++++ G H +++ E G ++G +HGQLG GS+ E+EP +
Sbjct: 150 QPPFCQPLAPELRVRQLQLGAEHALLLCEAGQVFSWGGGRHGQLGHGSLEAELEPRLLEA 209
Query: 159 LVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
L + A G +V +S E I G + GQL
Sbjct: 210 LQGLRMAEVAAGGWHSVCVS--ETGDIYIWGWNESGQL 245
Score = 89 (36.4 bits), Expect = 8.4e-12, Sum P(2) = 8.4e-12
Identities = 25/72 (34%), Positives = 35/72 (48%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G+L+ L P L L G+ + VAAG H V V G Y WG NE GQL +
Sbjct: 196 GSLEAEL-EPRLLEALQGLRMAEVAAG--GWHSVCVSETGDIYIWGWNESGQLALPTRSG 252
Query: 98 RDRPTIVSELSK 109
++ T+ E ++
Sbjct: 253 TEKKTVREEATE 264
Score = 69 (29.3 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 27/90 (30%), Positives = 43/90 (47%)
Query: 322 PKP-LMDLS-GWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV 378
P P L+DL G + G+ H V +WG +YG+LG+ SS P +V
Sbjct: 291 PFPALLDLPLGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHKD--STSSDQPCRV 348
Query: 379 D--ILEGMHVISVACGYGHSLVI-VDRTNV 405
+ + + V +V CG ++ V V+R N+
Sbjct: 349 EYFVERQLEVRAVTCGPWNTYVYAVERENI 378
Score = 45 (20.9 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 284 LPPEAV-ISAGSVNSSCTAGGGQLYMWG 310
L +AV S GS +++ G+LY WG
Sbjct: 300 LGSDAVKASCGSRHTAVVTRTGELYTWG 327
>ZFIN|ZDB-GENE-081015-2 [details] [associations]
symbol:rpgrb "retinitis pigmentosa GTPase regulator
b" species:7955 "Danio rerio" [GO:0060287 "epithelial cilium
movement involved in determination of left/right asymmetry"
evidence=IMP] [GO:0060271 "cilium morphogenesis" evidence=IMP]
[GO:0010842 "retina layer formation" evidence=IMP] [GO:0060041
"retina development in camera-type eye" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] INTERPRO:IPR000408
Pfam:PF00415 ZFIN:ZDB-GENE-081015-2 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0010842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0060271 GO:GO:0060287
GeneTree:ENSGT00700000104160 EMBL:CR450831 IPI:IPI00798788
RefSeq:XP_685964.5 UniGene:Dr.100975 Ensembl:ENSDART00000088624
GeneID:557752 KEGG:dre:557752 CTD:557752 NextBio:20882140
Bgee:F1QM29 Uniprot:F1QM29
Length = 1413
Score = 236 (88.1 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 101/362 (27%), Positives = 156/362 (43%)
Query: 66 VSC---HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
+SC H V G+ + +G N GQLG G K ++PT V L ++K GR+HT
Sbjct: 41 ISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALKSERVKLTACGRTHT 100
Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGA 182
+V T GN A G N GQLG G + V + G + +
Sbjct: 101 LVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQ------GP-----IKMLAAG 149
Query: 183 SILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP-RPRAIAALAGETIVKVACGTNHT 241
S +A L Q G+L DN + + L E+ P+ ++ G+ + V+CG H+
Sbjct: 150 SNTSAALTQDGRLYMWGDNS----EGQIGLGKESNALTPQEVSV--GKRVFWVSCGYYHS 203
Query: 242 VAVDSKGYVYTWGFGGYGRLGHREQK--DEWVPRRV-DVFQRN-NVLPPEAVISAGSVNS 297
V G +YT+G G+LG +K + VP++V D+ R V A + N
Sbjct: 204 AFVTVDGALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPDRVVQVACGGGHTVALTENE 263
Query: 298 SCTAGGGQLYMWGKLKNNGD---DWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-S 353
+ G GQ +G+L +G + P+ + ++ G H + D+ + +
Sbjct: 264 VYSFGLGQ---FGQL-GHGTFIFESRLPRVVEHFRKGRVKHAACGENHTALITDNGLLYT 319
Query: 354 WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD-RTNVGERLDQV 412
+G ++G+LG G + P HV SV CG H LV+ RT ER D +
Sbjct: 320 FGDGRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSVTCGGCHMLVLAKPRT---ERPDDL 376
Query: 413 IL 414
IL
Sbjct: 377 IL 378
Score = 224 (83.9 bits), Expect = 4.0e-15, P = 4.0e-15
Identities = 78/264 (29%), Positives = 121/264 (45%)
Query: 22 LLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
L GS W +G G + PT ++ L ++ A G H + G Y
Sbjct: 57 LFMFGSNNWGQLGL--GTKT-TVNKPTCVKALKSERVKLTACG--RTHTLVFTSRGNLYA 111
Query: 82 WGRNERGQLGHGDKIQRDRPTIVSELSKY-KIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
G N GQLG GD R +V +K IK AG + + +T+DG +G N G
Sbjct: 112 CGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIKMLAAGSNTSAALTQDGRLYMWGDNSEG 171
Query: 141 QLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTD 200
Q+G G N + P V + V +CG + +++ V+GA + G G+LG T+
Sbjct: 172 QIGLGKESNALTPQEVS-VGKRVFWVSCGYYHSAFVT-VDGA-LYTFGEKDSGKLGLSTE 228
Query: 201 NEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGR 260
N K P+ + + + +V+VACG HTVA+ ++ VY++G G +G+
Sbjct: 229 KLANHKV------------PQQVTDIP-DRVVQVACGGGHTVAL-TENEVYSFGLGQFGQ 274
Query: 261 LGHREQKDEW-VPRRVDVFQRNNV 283
LGH E +PR V+ F++ V
Sbjct: 275 LGHGTFIFESRLPRVVEHFRKGRV 298
Score = 209 (78.6 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 81/295 (27%), Positives = 134/295 (45%)
Query: 114 KAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADF 172
+ G HT +VTE+G FG N GQLG G+ +P+ V+ L SE V TACG
Sbjct: 40 RISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALKSERVKLTACGRTH 99
Query: 173 TVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIV 232
T+ +S G ++ G GQLG G N+ T V+ + P I
Sbjct: 100 TLVFTS-RG-NLYACGGNNEGQLGLGDCND-RTSFHLVEFFNKQGP------------IK 144
Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP----PEA 288
+A G+N + A+ G +Y WG G++G ++ + P+ V V +R + A
Sbjct: 145 MLAAGSNTSAALTQDGRLYMWGDNSEGQIGLGKESNALTPQEVSVGKRVFWVSCGYYHSA 204
Query: 289 VISA-GSVNSSCTAGGGQLYM-WGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVG 346
++ G++ + G+L + KL N+ P+ + D+ ++ G H
Sbjct: 205 FVTVDGALYTFGEKDSGKLGLSTEKLANH----KVPQQVTDIPDRVVQVACGGG-HTVAL 259
Query: 347 ADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
++ S+G Q+G+LG+G + +S +P+ V+ V ACG H+ +I D
Sbjct: 260 TENEVYSFGLGQFGQLGHGTFIFESR-LPRVVEHFRKGRVKHAACGENHTALITD 313
>TAIR|locus:2009739 [details] [associations]
symbol:AT1G65920 species:3702 "Arabidopsis thaliana"
[GO:0005543 "phospholipid binding" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=ISM] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005773 "vacuole" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] InterPro:IPR000306
InterPro:IPR001849 Pfam:PF01363 SMART:SM00064 SMART:SM00233
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0005773 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0046872 EMBL:AC009513
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184 InterPro:IPR013591
Pfam:PF08381 PROSITE:PS51514 HSSP:Q15075 HOGENOM:HOG000240974
IPI:IPI00526779 PIR:E96683 RefSeq:NP_176767.1 UniGene:At.35824
ProteinModelPortal:Q9SRZ7 SMR:Q9SRZ7 PaxDb:Q9SRZ7 PRIDE:Q9SRZ7
EnsemblPlants:AT1G65920.1 GeneID:842904 KEGG:ath:AT1G65920
TAIR:At1g65920 InParanoid:Q9SRZ7 OMA:AQADSWF PhylomeDB:Q9SRZ7
ProtClustDB:CLSN2679687 Genevestigator:Q9SRZ7 Uniprot:Q9SRZ7
Length = 1006
Score = 233 (87.1 bits), Expect = 2.4e-16, P = 2.4e-16
Identities = 102/387 (26%), Positives = 160/387 (41%)
Query: 30 WDAV-GRRKGALDGN-LVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNER 87
W A+ G G+ + N +SP L D++ ++ G H V +G + WG
Sbjct: 264 WGAITGLIDGSKNQNDALSPKLLESATMFDVQSISLGAK--HAALVTRQGEVFCWGNGNS 321
Query: 88 GQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG----QLG 143
G+LG I D P V L ++ T VTE G + W G Q G
Sbjct: 322 GKLGLKVNIDIDHPKRVESLEDVAVRSVACSDHQTCAVTESGE--LYLWGIDGGTIEQSG 379
Query: 144 SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEY 203
S + +I S V V + ACGA T ++S + G +G LGHG+
Sbjct: 380 SQFLTRKI--SDVLGGSLTVLSVACGAWHTAIVTS--SGQLFTYGSGTFGVLGHGS---- 431
Query: 204 NTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV-----DSKGY-------VY 251
E+ +P+ + +L ++ V+CG HT A+ D K Y ++
Sbjct: 432 ----------LESVTKPKEVESLRRMKVISVSCGPWHTAAIVETANDRKFYNAKSCGKLF 481
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEA---VISAGSVNSSCTAGGGQLYM 308
TWG G GRLGH + K + VP V ++ + + A S++ + G ++
Sbjct: 482 TWGDGDKGRLGHADSKRKLVPTCVTELIDHDFIKVSCGWTLTVALSISGTVYTMGSSIH- 540
Query: 309 WGKLK-NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS--SCISWGHAQYGELGYG 365
G+L D L +L+ ++ + SG+ HH S + +WG G+LG G
Sbjct: 541 -GQLGCPRAKDKSVNVVLGNLTRQFVKDIASGS-HHVAVLTSFGNVYTWGKGMNGQLGLG 598
Query: 366 PYGQKSSAMPKKVDILEGMHVISVACG 392
++S P V+ L V S+ACG
Sbjct: 599 DVRDRNS--PVLVEPLGDRLVESIACG 623
Score = 185 (70.2 bits), Expect = 5.9e-11, P = 5.9e-11
Identities = 57/194 (29%), Positives = 95/194 (48%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P+ + + + ++ G H V +G V+ WG G G+LG + D P+RV+ +
Sbjct: 283 PKLLESATMFDVQSISLGAKHAALVTRQGEVFCWGNGNSGKLGLKVNIDIDHPKRVESLE 342
Query: 280 RNNVLPPEAVIS-AGSVNSSCTAG-GGQLYMWG----KLKNNGDDWMYPKPLMDLSGWNL 333
+V AV S A S + +C G+LY+WG ++ +G ++ K + D+ G +L
Sbjct: 343 --DV----AVRSVACSDHQTCAVTESGELYLWGIDGGTIEQSGSQFLTRK-ISDVLGGSL 395
Query: 334 RCMD--SGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVA 390
+ G H V + ++G +G LG+G +S PK+V+ L M VISV+
Sbjct: 396 TVLSVACGAWHTAIVTSSGQLFTYGSGTFGVLGHGSL--ESVTKPKEVESLRRMKVISVS 453
Query: 391 CGYGHSLVIVDRTN 404
CG H+ IV+ N
Sbjct: 454 CGPWHTAAIVETAN 467
Score = 153 (58.9 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 46/153 (30%), Positives = 67/153 (43%)
Query: 25 CGST-CW-DAVGRRKGALDGNL-VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
CG W D R G D + PT + L+ D F+ C VA+ + G YT
Sbjct: 477 CGKLFTWGDGDKGRLGHADSKRKLVPTCVTELIDHD--FIKVSCGWTLTVALSISGTVYT 534
Query: 82 WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
G + GQLG + ++ L++ +K +G H V+T GN +G +GQ
Sbjct: 535 MGSSIHGQLGCPRAKDKSVNVVLGNLTRQFVKDIASGSHHVAVLTSFGNVYTWGKGMNGQ 594
Query: 142 LGSGSIRNEIEPSPVRCLVSE-VTATACGADFT 173
LG G +R+ P V L V + ACG + T
Sbjct: 595 LGLGDVRDRNSPVLVEPLGDRLVESIACGLNLT 627
Score = 143 (55.4 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 46/169 (27%), Positives = 74/169 (43%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G+ +TWG ++G+LGH D ++ PT V+EL + K G + TV ++ G G
Sbjct: 478 GKLFTWGDGDKGRLGHADSKRKLVPTCVTELIDHDFIKVSCGWTLTVALSISGTVYTMGS 537
Query: 137 NKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
+ HGQLG +++ + L + V A G+ L+S ++ G GQL
Sbjct: 538 SIHGQLGCPRAKDKSVNVVLGNLTRQFVKDIASGSHHVAVLTSF--GNVYTWGKGMNGQL 595
Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV 244
G G + N+ P + L + +ACG N T A+
Sbjct: 596 GLGDVRDRNS--------------PVLVEPLGDRLVESIACGLNLTAAI 630
Score = 41 (19.5 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 204 NTKDSSVKLAYEAQPRPRAIAALAGET 230
+ +DS++KL +A P L ET
Sbjct: 917 SNRDSNIKLLVDASPAITRTGYLQNET 943
>UNIPROTKB|E1C514 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:SPAVDFR EMBL:AADN02016126
EMBL:AADN02016127 EMBL:AADN02016128 EMBL:AADN02016129
IPI:IPI00576498 Ensembl:ENSGALT00000016877 ArrayExpress:E1C514
Uniprot:E1C514
Length = 1050
Score = 232 (86.7 bits), Expect = 3.3e-16, P = 3.3e-16
Identities = 76/278 (27%), Positives = 118/278 (42%)
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSP-VRCLVSEVTATACGADFTVWLSSVEGASILNAGLP 190
L +G++ GQ G GS I P P V + + + +E + GL
Sbjct: 2 LCWGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLN 61
Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
GQLGH ++ +P + LAG+ IV VACG +H+VA+ +G V
Sbjct: 62 TKGQLGHESEGS----------------KPAWVGTLAGQHIVHVACGESHSVALSDQGQV 105
Query: 251 YTWGFGGYGRLGHREQKDE-WVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
++WG G G+LG +D VPR + + +L IS G+ + A GQ + W
Sbjct: 106 FSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQ----ISCGNWHCLALAADGQFFTW 161
Query: 310 GK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGE 361
G+ L P+ + L G L + +G H F + S + WG G+
Sbjct: 162 GQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQ 221
Query: 362 LGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
LG + S P V +L V+ ++CG H+ V+
Sbjct: 222 LGLSDERDRES--PCHVKLLRSQKVVYISCGEEHTAVL 257
Score = 230 (86.0 bits), Expect = 5.6e-16, P = 5.6e-16
Identities = 58/155 (37%), Positives = 80/155 (51%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
SP R++ L G+ + VAAG H A+ + G + WG+N GQLG D+ R+ P V
Sbjct: 180 SPQRVKSLDGIPLAQVAAG--GAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVK 237
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L K+ G HT V+T+ G FG GQLG S+ +E+ P V L+ SEV+
Sbjct: 238 LLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVS 297
Query: 165 ATACGADFTVWLSSVEGASILNA-GLPQYGQLGHG 198
ACG T L+ V + ++ A G GQLG G
Sbjct: 298 QIACGRHHT--LAFVPSSGMIYAFGCGTRGQLGTG 330
Score = 229 (85.7 bits), Expect = 7.3e-16, P = 7.3e-16
Identities = 84/314 (26%), Positives = 144/314 (45%)
Query: 65 CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVV 124
C H V + +G YT G N +GQLGH + + +P V L+ I G SH+V
Sbjct: 41 CGGNHSVFLLEDGEVYTCGLNTKGQLGH--ESEGSKPAWVGTLAGQHIVHVACGESHSVA 98
Query: 125 VTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVSE-VTATACGADFTVWLSSVEGA 182
+++ G ++G GQLG +I + + P ++ L + + +CG + L++ +G
Sbjct: 99 LSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAA-DG- 156
Query: 183 SILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTV 242
G YGQLG G + +Q P+ + +L G + +VA G H+
Sbjct: 157 QFFTWGQNSYGQLGLGKE-------------CPSQASPQRVKSLDGIPLAQVAAGGAHSF 203
Query: 243 AVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL------PPEAVIS-AGSV 295
A+ G V+ WG G+LG +++D P V + + V+ AV++ +G V
Sbjct: 204 ALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGV 263
Query: 296 NSSCTAGGGQLYMWGKLKNNG-DDWMYPKPLMDLSGWNLRCMDSGNMHH---FVGADSSC 351
T G G G+L ++ +D + P+ +++L G + + G HH FV +
Sbjct: 264 ---FTFGAGSC---GQLGHDSMNDEVNPRRVLELMGSEVSQIACGR-HHTLAFVPSSGMI 316
Query: 352 ISWGHAQYGELGYG 365
++G G+LG G
Sbjct: 317 YAFGCGTRGQLGTG 330
Score = 228 (85.3 bits), Expect = 9.4e-16, P = 9.4e-16
Identities = 93/328 (28%), Positives = 146/328 (44%)
Query: 82 WGRNERGQLGHGDKIQR--DRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
WG + GQ G G +Q P + + +K+ G +H+V + EDG G N
Sbjct: 4 WGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
GQLG S ++ P+ V L + + ACG +V LS +G + + G GQLG
Sbjct: 64 GQLGHESEGSK--PAWVGTLAGQHIVHVACGESHSVALSD-QG-QVFSWGAGSDGQLG-- 117
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
T + +V + PR I L +TI++++CG H +A+ + G +TWG Y
Sbjct: 118 ----LTTIEDAVTV-------PRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSY 166
Query: 259 GRLG-HREQKDEWVPRRV---DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
G+LG +E + P+RV D V A A S+ S G G+ G+L
Sbjct: 167 GQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSL-SGAVFGWGKNSS-GQLGL 224
Query: 315 NGD-DWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSS 372
+ + D P + L + + G H V S + ++G G+LG+ + +
Sbjct: 225 SDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN 284
Query: 373 AMPKKVDILEGMHVISVACGYGHSLVIV 400
P++V L G V +ACG H+L V
Sbjct: 285 --PRRVLELMGSEVSQIACGRHHTLAFV 310
Score = 222 (83.2 bits), Expect = 4.6e-15, P = 4.6e-15
Identities = 68/232 (29%), Positives = 105/232 (45%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGD-KIQRDRPTIVS 105
P + L G I VA G H VA+ +G+ ++WG GQLG + P ++
Sbjct: 75 PAWVGTLAGQHIVHVACG--ESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIK 132
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSPVRCLVS-EV 163
+L++ I + G H + + DG +G N +GQLG G ++ P V+ L +
Sbjct: 133 KLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPL 192
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
A G + LS + GA + G GQLG + + ++S P +
Sbjct: 193 AQVAAGGAHSFALS-LSGA-VFGWGKNSSGQLGLSDERD---RES-----------PCHV 236
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
L + +V ++CG HT + G V+T+G G G+LGH DE PRRV
Sbjct: 237 KLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288
Score = 135 (52.6 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 36/113 (31%), Positives = 51/113 (45%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
SP ++ L + +++ G H + G +T+G GQLGH P V
Sbjct: 232 SPCHVKLLRSQKVVYISCG--EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL 289
Query: 106 ELSKYKIKKAGAGRSHTVV-VTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
EL ++ + GR HT+ V G AFG GQLG+G N PSPV+
Sbjct: 290 ELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVK 342
>ZFIN|ZDB-GENE-020509-1 [details] [associations]
symbol:nek8 "NIMA (never in mitosis gene a)-related
kinase 8" species:7955 "Danio rerio" [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0061326 "renal tubule development" evidence=IMP]
[GO:0072116 "pronephros formation" evidence=IGI] [GO:0072372
"primary cilium" evidence=IDA] [GO:0001947 "heart looping"
evidence=IGI] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-020509-1 GO:GO:0005524 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0072372 GO:GO:0001947 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 KO:K08857 EMBL:AF407580
IPI:IPI00770181 RefSeq:NP_620776.1 UniGene:Dr.12587
ProteinModelPortal:Q90XC2 GeneID:171094 KEGG:dre:171094 CTD:284086
HOGENOM:HOG000006908 HOVERGEN:HBG098799 InParanoid:Q90XC2
NextBio:20797120 ArrayExpress:Q90XC2 GO:GO:0072116 GO:GO:0061326
Uniprot:Q90XC2
Length = 697
Score = 229 (85.7 bits), Expect = 3.8e-16, P = 3.8e-16
Identities = 78/279 (27%), Positives = 125/279 (44%)
Query: 55 GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK 114
GV I+ V+ G + C+ D G T+G G LGHG+ +P IV L Y++ +
Sbjct: 397 GVTIKSVSCGDLFTTCLT-D-RGIIMTFGSGSNGCLGHGNFNDVTQPKIVEALLGYELVQ 454
Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFT 173
G SH + VT + ++G +G+LG + + P V E CG D +
Sbjct: 455 VSCGASHVLAVTNEREVFSWGRGDNGRLGLATQDSHNCPQQVSLPADFEAQRVLCGVDCS 514
Query: 174 VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI--AALAGETI 231
+ +S+ IL G ++ +LG D T++ S E + + A L E I
Sbjct: 515 MIMSTQH--QILACGNNRFNKLG--LDKVSGTEEPSSFCQVEEVHLFQLVQSAPLNTEKI 570
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
V + GT H+VAV KG +T+G +G+LG ++ VP +V Q + + +
Sbjct: 571 VYIDIGTAHSVAVTEKGQCFTFGSNQHGQLGCSHRRSSRVPYQVSGLQ--GI----TMAA 624
Query: 292 AGSVNSSCTAGGGQLYMWGK-----LKNNGDDWMYPKPL 325
G + G++Y WGK L +D+ PKP+
Sbjct: 625 CGDAFTLAIGAEGEVYTWGKGARGRLGRKEEDFGIPKPV 663
Score = 201 (75.8 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 62/238 (26%), Positives = 112/238 (47%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
++ P + L+G ++ V C + H +AV E ++WGR + G+LG + + P
Sbjct: 437 DVTQPKIVEALLGYEL--VQVSCGASHVLAVTNEREVFSWGRGDNGRLGLATQDSHNCPQ 494
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE 162
VS + ++ ++ G +++++ LA G N+ +LG + EPS C V E
Sbjct: 495 QVSLPADFEAQRVLCGVDCSMIMSTQHQILACGNNRFNKLGLDKVSGTEEPSSF-CQVEE 553
Query: 163 VTATAC--GADF-TVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
V A T + ++ + + + + GQ N++ S + +
Sbjct: 554 VHLFQLVQSAPLNTEKIVYIDIGTAHSVAVTEKGQCFTFGSNQHGQLGCSHRRSSRV--- 610
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
P ++ L G T+ ACG T+A+ ++G VYTWG G GRLG +E+ D +P+ V +
Sbjct: 611 PYQVSGLQGITMA--ACGDAFTLAIGAEGEVYTWGKGARGRLGRKEE-DFGIPKPVQL 665
Score = 140 (54.3 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 77/316 (24%), Positives = 133/316 (42%)
Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIR-----NEIEPSPV-RCLVSE-- 162
++ + GR+ + VT+ G + W +GSG +++P + R L +
Sbjct: 341 EVIQVSLGRTQKMGVTKSGRLIT--WEAPS-VGSGEPTLPGAVEQMQPQFISRFLEGQSG 397
Query: 163 --VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
+ + +CG FT L+ G I+ G G LGHG N+ +P
Sbjct: 398 VTIKSVSCGDLFTTCLTD-RGI-IMTFGSGSNGCLGHGNFNDVT--------------QP 441
Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV--- 277
+ + AL G +V+V+CG +H +AV ++ V++WG G GRLG Q P++V +
Sbjct: 442 KIVEALLGYELVQVSCGASHVLAVTNEREVFSWGRGDNGRLGLATQDSHNCPQQVSLPAD 501
Query: 278 FQRNNVL-PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNL-RC 335
F+ VL + + + + G + G K +G + P + +L +
Sbjct: 502 FEAQRVLCGVDCSMIMSTQHQILACGNNRFNKLGLDKVSGTE--EPSSFCQVEEVHLFQL 559
Query: 336 MDSG--NMHHFVGAD-SSCISWGHAQYGE---LGYGPYGQ------KSSAMPKKVDILEG 383
+ S N V D + S + G+ G +GQ +SS +P +V L+G
Sbjct: 560 VQSAPLNTEKIVYIDIGTAHSVAVTEKGQCFTFGSNQHGQLGCSHRRSSRVPYQVSGLQG 619
Query: 384 MHVISVACGYGHSLVI 399
+ ACG +L I
Sbjct: 620 --ITMAACGDAFTLAI 633
>ZFIN|ZDB-GENE-070912-423 [details] [associations]
symbol:rpgra "retinitis pigmentosa GTPase regulator
a" species:7955 "Danio rerio" [GO:0072001 "renal system
development" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-070912-423 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0072001 GeneTree:ENSGT00700000104160 EMBL:BX571713
IPI:IPI00955233 RefSeq:XP_003199276.1 Ensembl:ENSDART00000079095
GeneID:571327 KEGG:dre:571327 CTD:571327 NextBio:20890513
Bgee:F1QV77 Uniprot:F1QV77
Length = 1698
Score = 232 (86.7 bits), Expect = 6.2e-16, P = 6.2e-16
Identities = 99/350 (28%), Positives = 142/350 (40%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
V C H V +GR + +G N RGQLG K +P V L + + G
Sbjct: 37 VHISCGQSHSAFVTEQGRLFVFGDNNRGQLGLQIKGPVTKPVCVKVLKGERAQSVACGTD 96
Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR--CLVSEVTATACGADFTVWLSS 178
HT+V T G LA G N GQLG G + I +R C + + + G D T +
Sbjct: 97 HTLVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRLRPFCDYAPIKLLSAG-DHTSAALT 155
Query: 179 VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGT 238
+G L G GQLG G D S L E G++I V+CG
Sbjct: 156 EDGRLFL-WGDNSAGQLGFGND-------SHALLPKELN---------MGQSIHWVSCGY 198
Query: 239 NHTVAVDSKGYVYTWGFGGYGRLG---HREQKDEWVPRRVDVFQRNNVLPPEA----VIS 291
H+ V G VY++G GRLG H+ + P+RV+ ++VL ++
Sbjct: 199 RHSALVTDSGDVYSFGESADGRLGLSAHQLANHSY-PQRVESL--HSVLQVACGGKHTLA 255
Query: 292 AGSVNSSCTAGG--GQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS 349
C GG GQL + G L D P + + + G H + DS
Sbjct: 256 LTEDELYCFGGGEFGQLGL-GTLVFVADS---PVAVGHFRKGRVTHVTCGEQHSALITDS 311
Query: 350 SCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLV 398
+ ++G ++G+LG+G + P V++VACG H LV
Sbjct: 312 GLLYTFGDGRHGKLGHGDENFTNQFTPTVCQRFFEYSVMTVACGSSHMLV 361
Score = 186 (70.5 bits), Expect = 8.7e-11, P = 8.7e-11
Identities = 83/294 (28%), Positives = 132/294 (44%)
Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEI-EPSPVRCLVSE-VTATACGADFTVW 175
G+SH+ VTE G FG N GQLG I+ + +P V+ L E + ACG D T+
Sbjct: 42 GQSHSAFVTEQGRLFVFGDNNRGQLGL-QIKGPVTKPVCVKVLKGERAQSVACGTDHTL- 99
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
+S+ +G IL AG GQLG G N DS ++++ R R A +K+
Sbjct: 100 VSTSQG-EILAAGGNSDGQLGLGHCN-----DS---ISFQ---RLRPFCDYAP---IKLL 144
Query: 236 CGTNHT-VAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP----PEAVI 290
+HT A+ G ++ WG G+LG +P+ +++ Q + + A++
Sbjct: 145 SAGDHTSAALTEDGRLFLWGDNSAGQLGFGNDSHALLPKELNMGQSIHWVSCGYRHSALV 204
Query: 291 S-AGSVNSSCTAGGGQLYMWG-KLKNNGDDWMYPKPLMDL-SGWNLRCMDSGNMHHFVGA 347
+ +G V S + G+L + +L N+ YP+ + L S + C G H
Sbjct: 205 TDSGDVYSFGESADGRLGLSAHQLANHS----YPQRVESLHSVLQVAC---GGKHTLALT 257
Query: 348 DSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
+ +G ++G+LG G + + P V V V CG HS +I D
Sbjct: 258 EDELYCFGGGEFGQLGLGTLVFVADS-PVAVGHFRKGRVTHVTCGEQHSALITD 310
Score = 136 (52.9 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 64/231 (27%), Positives = 106/231 (45%)
Query: 40 LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG---DKI 96
+ G + P ++ L G + VA G + H + +G G N GQLG G D I
Sbjct: 70 IKGPVTKPVCVKVLKGERAQSVACG--TDHTLVSTSQGEILAAGGNSDGQLGLGHCNDSI 127
Query: 97 --QRDRPTIVSELSKYKIKKAGAGRSHT-VVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
QR RP + + K+ AG HT +TEDG +G N GQLG G+ + + P
Sbjct: 128 SFQRLRP--FCDYAPIKLLSAG---DHTSAALTEDGRLFLWGDNSAGQLGFGNDSHALLP 182
Query: 154 SPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
+ + + +CG + ++ + + + G G+LG S+ +LA
Sbjct: 183 KELN-MGQSIHWVSCGYRHSALVT--DSGDVYSFGESADGRLGL----------SAHQLA 229
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAV-DSKGYVYTWG-FGGYGRLG 262
+ P+ + +L ++++VACG HT+A+ + + Y + G FG G LG
Sbjct: 230 NHSYPQ--RVESL--HSVLQVACGGKHTLALTEDELYCFGGGEFGQLG-LG 275
Score = 128 (50.1 bits), Expect = 0.00020, P = 0.00020
Identities = 49/198 (24%), Positives = 91/198 (45%)
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ----RN 281
L + V ++CG +H+ V +G ++ +G G+LG + + P V V + ++
Sbjct: 31 LKSDIPVHISCGQSHSAFVTEQGRLFVFGDNNRGQLGLQIKGPVTKPVCVKVLKGERAQS 90
Query: 282 NVLPPEAVISAGSVNSSCTAGG---GQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDS 338
+ + + S AGG GQL + G N+ + +P D + ++ + +
Sbjct: 91 VACGTDHTLVSTSQGEILAAGGNSDGQLGL-GHC-NDSISFQRLRPFCDYAP--IKLLSA 146
Query: 339 GNMHHFVGA---DSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
G+ H A D WG G+LG+G + +PK++++ + +H +S CGY H
Sbjct: 147 GD--HTSAALTEDGRLFLWGDNSAGQLGFG--NDSHALLPKELNMGQSIHWVS--CGYRH 200
Query: 396 SLVIVDRTNV---GERLD 410
S ++ D +V GE D
Sbjct: 201 SALVTDSGDVYSFGESAD 218
>UNIPROTKB|C9JW69 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 IPI:IPI00787306
ProteinModelPortal:C9JW69 SMR:C9JW69 STRING:C9JW69
Ensembl:ENST00000411533 ArrayExpress:C9JW69 Bgee:C9JW69
Uniprot:C9JW69
Length = 372
Score = 177 (67.4 bits), Expect = 7.5e-16, Sum P(2) = 7.5e-16
Identities = 69/272 (25%), Positives = 117/272 (43%)
Query: 49 RLRP-LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR--PTIVS 105
R +P LV + V A H V + G+ Y++G N+ G LG ++ P V
Sbjct: 74 RKKPALVSIPEDVVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKV- 132
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW--NKHGQLGS-GSIRNEIEPSPVRCLVSE 162
EL + K+ + AG SHT +T+DG +G + +G +G ++ + P V+ V
Sbjct: 133 ELQE-KVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDVP- 190
Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
V A G D V L++ +G + G + GQLG + + L P+
Sbjct: 191 VVKVASGNDHLVMLTA-DG-DLYTLGCGEQGQLGR-VPELFANRGGRQGLERLLVPKCVM 247
Query: 223 IAALAGETIVKVA---CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
+ + V+ CG T A+ +G+VY +G Y +LG + ++P+ + F+
Sbjct: 248 LKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFK 307
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
N S G ++ C G+ Y G+
Sbjct: 308 --NSTKSWVGFSGGQHHTVCMDSEGKAYSLGR 337
Score = 149 (57.5 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 69/259 (26%), Positives = 121/259 (46%)
Query: 32 AVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWG--RNERGQ 89
A+GR +++G+ + P ++ + + V+AG H A+ +GR + WG R+ G
Sbjct: 115 ALGRDT-SVEGSEMVPGKVE--LQEKVVQVSAG--DSHTAALTDDGRVFLWGSFRDNNGV 169
Query: 90 LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG------ 143
+G + +++ + +L + K +G H V++T DG+ G + GQLG
Sbjct: 170 IGLLEPMKKSMVPVQVQLD-VPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELF 228
Query: 144 -SGSIRNEIEPSPV-RCLVSEVTATA---------CGADFTVWLSSVEGASILNAGLPQY 192
+ R +E V +C++ + + CGA FT +S EG + GL Y
Sbjct: 229 ANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISH-EG-HVYGFGLSNY 286
Query: 193 GQLGH-GTDNEYNTKD-SSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
QLG GT++ + ++ +S K + ++ +G G +HTV +DS+G
Sbjct: 287 HQLGTPGTESCFIPQNLTSFKNS------TKSWVGFSG--------GQHHTVCMDSEGKA 332
Query: 251 YTWGFGGYGRLGHREQKDE 269
Y+ G YGRLG E +E
Sbjct: 333 YSLGRAEYGRLGLGEGAEE 351
Score = 146 (56.5 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 58/204 (28%), Positives = 89/204 (43%)
Query: 62 AAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI-QRDRPTIVSELSKYKIKKAGAGRS 120
A C H G T G+ + GQLG G+ + +R +P +VS + +A AG
Sbjct: 37 ARSCQVSHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVS--IPEDVVQAEAGGM 94
Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSG-SIR-NEIEPSPVRCLVSEVTATACGADFTVWLSS 178
HTV +++ G +FG N G LG S+ +E+ P V L +V + G T L+
Sbjct: 95 HTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVE-LQEKVVQVSAGDSHTAALTD 153
Query: 179 VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGT 238
+G L +G DN + + L + + +VKVA G
Sbjct: 154 -DGRVFL------WGSF---RDN-----NGVIGLLEPMKKSMVPVQVQLDVPVVKVASGN 198
Query: 239 NHTVAVDSKGYVYTWGFGGYGRLG 262
+H V + + G +YT G G G+LG
Sbjct: 199 DHLVMLTADGDLYTLGCGEQGQLG 222
Score = 103 (41.3 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 49/163 (30%), Positives = 72/163 (44%)
Query: 119 RSHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCLVSEVTATACGADFTVWLS 177
RSH+ TE G L G GQLG G ++ +P+ V + +V G TV LS
Sbjct: 45 RSHS---TEPGLVLTLGQGDVGQLGLGENVMERKKPALVS-IPEDVVQAEAGGMHTVCLS 100
Query: 178 SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
+ + + G G LG +D+SV+ E P + E +V+V+ G
Sbjct: 101 --KSGQVYSFGCNDEGALG---------RDTSVE-GSEMVPGKVELQ----EKVVQVSAG 144
Query: 238 TNHTVAVDSKGYVYTWG-F-GGYGRLGHRE-QKDEWVPRRVDV 277
+HT A+ G V+ WG F G +G E K VP +V +
Sbjct: 145 DSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQL 187
Score = 87 (35.7 bits), Expect = 7.5e-16, Sum P(2) = 7.5e-16
Identities = 24/57 (42%), Positives = 29/57 (50%)
Query: 338 SGNMHHFVGADSS--CISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
SG HH V DS S G A+YG LG G G + ++P + L V SVACG
Sbjct: 317 SGGQHHTVCMDSEGKAYSLGRAEYGRLGLGE-GAEEKSIPTLISRLPA--VSSVACG 370
>UNIPROTKB|F1RNC5 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GeneTree:ENSGT00700000104137
EMBL:FP016171 Ensembl:ENSSSCT00000019338 OMA:EPASHQQ Uniprot:F1RNC5
Length = 700
Score = 226 (84.6 bits), Expect = 8.4e-16, P = 8.4e-16
Identities = 69/245 (28%), Positives = 121/245 (49%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G+L+ ++ PT + L+G ++ V C + H +A+ E + WGR + G+LG G +
Sbjct: 434 GSLN-DISQPTIVEALLGYEM--VQVACGASHVLALSTERELFAWGRGDGGRLGLGTRES 490
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
P +V + ++ G ++++T G +LA G N+ +LG + EP+P +
Sbjct: 491 HCCPQLVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSLGEEPAPHQ 550
Query: 158 CLVSEVTATACGADFTVWLSSVEGASILNAGL-PQYGQLGHGTDNEYNT-KDSSVKLAYE 215
+ VT T G+ + ++ +L+ L P + L + + Y + +L
Sbjct: 551 QVEEAVTFTPLGS------APLDQEPLLSVDLGPAHSLLLTASGDCYTFGSNQHGQLGTN 604
Query: 216 AQPRPRA---IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
A+ RA + L G I VACG TVA+ ++G V++WG G GRLG R+ +D +P
Sbjct: 605 ARRVSRAPCRVQGLQGIKISTVACGDAFTVAIGAEGEVFSWGKGARGRLG-RKDEDAGLP 663
Query: 273 RRVDV 277
R V +
Sbjct: 664 RPVQL 668
Score = 207 (77.9 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 83/312 (26%), Positives = 136/312 (43%)
Query: 30 WDA--VGRRKGAL-DGNLVSP-----TR-LRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
W+A +G GAL G + P +R L GV I+ VA G + C+ D G
Sbjct: 364 WEAPPLGAGGGALLPGAIEQPQPQFVSRFLEGQSGVTIKHVACGDLFTACLT-D-RGIIM 421
Query: 81 TWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
T+G G LGHG +PTIV L Y++ + G SH + ++ + A+G G
Sbjct: 422 TFGSGSNGCLGHGSLNDISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGG 481
Query: 141 QLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
+LG G+ + P V E CG D ++ L+ V G + L G ++ +LG
Sbjct: 482 RLGLGTRESHCCPQLVPMPPGQEAQRVVCGIDSSMILT-VPGQA-LACGSNRFNKLGLDP 539
Query: 200 DNEYNTKDSSVKLAYEAQP-RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
+ + + + EA P A L E ++ V G H++ + + G YT+G +
Sbjct: 540 LS-LGEEPAPHQQVEEAVTFTPLGSAPLDQEPLLSVDLGPAHSLLLTASGDCYTFGSNQH 598
Query: 259 GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-----LK 313
G+LG ++ P RV Q + + ++ G + G+++ WGK L
Sbjct: 599 GQLGTNARRVSRAPCRVQGLQGIKI----STVACGDAFTVAIGAEGEVFSWGKGARGRLG 654
Query: 314 NNGDDWMYPKPL 325
+D P+P+
Sbjct: 655 RKDEDAGLPRPV 666
Score = 173 (66.0 bits), Expect = 7.6e-10, P = 7.6e-10
Identities = 95/380 (25%), Positives = 149/380 (39%)
Query: 42 GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG---DKIQR 98
G L +P RL P++ ++ VAAG V GR W G G I++
Sbjct: 327 GGLSAPLRL-PMLNTEVVQVAAG--RTQKAGVTRSGRLILWEAPPLGAGGGALLPGAIEQ 383
Query: 99 DRPTIVSEL----SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
+P VS S IK G T +T+ G + FG +G LG GS+ + +P+
Sbjct: 384 PQPQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPT 443
Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
V L+ E+ ACGA + LS+ + G G+LG GT E + V +
Sbjct: 444 IVEALLGYEMVQVACGASHVLALSTER--ELFAWGRGDGGRLGLGT-RESHCCPQLVPMP 500
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
Q R + + I+ V +A S + G LG + V
Sbjct: 501 -PGQEAQRVVCGIDSSMILTVP---GQALACGSNRF-NKLGLDPLS-LGEEPAPHQQVEE 554
Query: 274 RVDVFQRNNV-LPPEAVISA--GSVNSSCTAGGGQLYMWGKLKNN--GDDWMY----PKP 324
V + L E ++S G +S G Y +G ++ G + P
Sbjct: 555 AVTFTPLGSAPLDQEPLLSVDLGPAHSLLLTASGDCYTFGSNQHGQLGTNARRVSRAPCR 614
Query: 325 LMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
+ L G + + G+ +GA+ SWG G LG + + +P+ V L+
Sbjct: 615 VQGLQGIKISTVACGDAFTVAIGAEGEVFSWGKGARGRLGRK---DEDAGLPRPVQ-LDE 670
Query: 384 MH---VISVACGYGHSLVIV 400
H V SV+C +G++L+ V
Sbjct: 671 THPYTVTSVSCCHGNTLLAV 690
>UNIPROTKB|Q92834 [details] [associations]
symbol:RPGR "X-linked retinitis pigmentosa GTPase
regulator" species:9606 "Homo sapiens" [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0050896 "response to stimulus" evidence=IEA] [GO:0035085
"cilium axoneme" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007601 "visual perception" evidence=IMP] [GO:0001750
"photoreceptor outer segment" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0042073 "intraflagellar transport" evidence=ISS]
[GO:0036064 "cilium basal body" evidence=ISS] [GO:0036126 "sperm
flagellum" evidence=ISS] [GO:0006886 "intracellular protein
transport" evidence=TAS] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005794 GO:GO:0005813 GO:GO:0006886 GO:GO:0007601
Orphanet:1872 Orphanet:791 GO:GO:0050896 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085 GO:GO:0042384
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:CH471141 GO:GO:0042073 GO:GO:0001750 eggNOG:COG5184
Orphanet:244 GO:GO:0036064 Orphanet:49382 GO:GO:0036126
EMBL:AL606748 CTD:6103 HOVERGEN:HBG026899 EMBL:U57629 EMBL:X97668
EMBL:AJ238395 EMBL:AJ318463 EMBL:BC031624 EMBL:AF286471
EMBL:BK005711 IPI:IPI00023757 IPI:IPI00215806 IPI:IPI00215807
IPI:IPI00215808 IPI:IPI00382445 IPI:IPI00397031 RefSeq:NP_000319.1
RefSeq:NP_001030025.1 UniGene:Hs.61438 ProteinModelPortal:Q92834
SMR:Q92834 STRING:Q92834 PhosphoSite:Q92834 DMDM:23503098
PaxDb:Q92834 PRIDE:Q92834 DNASU:6103 Ensembl:ENST00000309513
Ensembl:ENST00000318842 Ensembl:ENST00000338898
Ensembl:ENST00000339363 Ensembl:ENST00000342811
Ensembl:ENST00000378505 Ensembl:ENST00000474584
Ensembl:ENST00000482855 GeneID:6103 KEGG:hsa:6103 UCSC:uc004deb.3
GeneCards:GC0XM038128 HGNC:HGNC:10295 HPA:HPA001593 MIM:300029
MIM:300455 MIM:300834 MIM:304020 MIM:312610 neXtProt:NX_Q92834
Orphanet:247522 PharmGKB:PA34656 OMA:NNVLPHY PhylomeDB:Q92834
ChiTaRS:RPGR GenomeRNAi:6103 NextBio:23741 ArrayExpress:Q92834
Bgee:Q92834 CleanEx:HS_RPGR Genevestigator:Q92834
GermOnline:ENSG00000156313 Uniprot:Q92834
Length = 1020
Score = 228 (85.3 bits), Expect = 9.0e-16, P = 9.0e-16
Identities = 79/294 (26%), Positives = 138/294 (46%)
Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWL 176
G H+ VVT + FG N GQLG GS +P+ V+ L E V ACG + T L
Sbjct: 43 GDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHT--L 100
Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK-VA 235
S EG ++ G GQLG G E NT I+ E +K ++
Sbjct: 101 VSTEGGNVYATGGNNEGQLGLGDTEERNTF--------------HVISFFTSEHKIKQLS 146
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
G+N + A+ G ++ WG G++G + + VP++V + + P + IS G
Sbjct: 147 AGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGK------PVSWISCGYY 200
Query: 296 NSSCTAGGGQLYMWGKLKNN--G------DDWMYPKPLMDLSGWNLRCMDSGNMHHFVGA 347
+S+ G+LY++G+ +N G + P+ + ++ ++ + G H V
Sbjct: 201 HSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVIQ-VACGGEHTVVLT 259
Query: 348 DSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
+++ ++G Q+G+LG G + ++S PK ++ + + ++CG H+ +I D
Sbjct: 260 ENAVYTFGLGQFGQLGLGTFLFETSE-PKVIENIRDQTISYISCGENHTALITD 312
Score = 199 (75.1 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 88/344 (25%), Positives = 132/344 (38%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
V C H V + Y +G N GQLG G K +PT V L K+K A GR+
Sbjct: 38 VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRN 97
Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVE 180
HT+V TE GN A G N GQLG G + SE A + E
Sbjct: 98 HTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTE 157
Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
+ G GQ+G N + V P+ + G+ + ++CG H
Sbjct: 158 DGRLFMWGDNSEGQIGLK-----NVSNVCV---------PQQVTI--GKPVSWISCGYYH 201
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQK--DEWVPRRVDVFQRNNVLPP---EAVISAGSV 295
+ V + G +Y +G G+LG Q + P+ V + E + +
Sbjct: 202 SAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVL-TE 260
Query: 296 NSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SW 354
N+ T G GQ G L + PK + ++ + + G H + D + ++
Sbjct: 261 NAVYTFGLGQFGQLG-LGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTF 319
Query: 355 GHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLV 398
G ++G+LG G + +P V VACG H +V
Sbjct: 320 GDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVV 363
>ZFIN|ZDB-GENE-040426-2216 [details] [associations]
symbol:rcc1 "regulator of chromosome condensation
1" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-040426-2216
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104160 KO:K11493 CTD:1104
HOGENOM:HOG000234341 HOVERGEN:HBG017712 OrthoDB:EOG4320Z9
HSSP:P18754 OMA:GTESCFV EMBL:CR855299 EMBL:BC059796 EMBL:BC066721
IPI:IPI00511389 RefSeq:NP_998343.1 UniGene:Dr.77012 SMR:Q6NY65
STRING:Q6NY65 Ensembl:ENSDART00000054026 GeneID:406457
KEGG:dre:406457 InParanoid:Q6NY65 NextBio:20818049 Uniprot:Q6NY65
Length = 418
Score = 218 (81.8 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 92/363 (25%), Positives = 155/363 (42%)
Query: 49 RLRP-LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
R +P LV + V A H V + G YT+G N+ G LG D + T+ +++
Sbjct: 57 RKKPALVTLPEGIVQAVAGGMHTVCLSDTGNVYTFGCNDEGALGR-DTSEEGSETVPAKV 115
Query: 108 SK-YKIKKAGAGRSHTVVVTEDGNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
KI + AG SH+ +TEDG +G + +G +G + PV+ + + V
Sbjct: 116 DLGEKIIQVSAGDSHSAALTEDGGVYVWGSFRDNNGVIGLLEPMKKCTV-PVKVPIDKPV 174
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
G D V L++ G + +G + GQLG ++ N + L +P+ I
Sbjct: 175 VKIVSGNDHLVMLTA-HG-ELYTSGCGEQGQLGRVAEHFAN-RGGRKGLMRLLEPQMVII 231
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
V CG T AV +G+VY +G Y +LG + +VP ++ F+ N
Sbjct: 232 KPRGKVVFTDVFCGAYFTFAVSKEGHVYGFGLSNYHQLGTQSTNTCFVPVKLSSFK--NS 289
Query: 284 LPPEAVISAGSVNSSCTAGGGQLYM-----WGKLKNNGDDWMYPKPLMDLSGWNLRCMDS 338
S G ++ C G+ Y +G+L D +P + +++ +
Sbjct: 290 TTSWVGFSGGQHHTLCLNSEGKAYSLGRAEYGRLGLGKDVGEKSEPTVVPGISDVQVVAC 349
Query: 339 G-NMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G ++ + V S SWG +LG G + S + LE V+SV+ G H++
Sbjct: 350 GASVSYAVTKQGSVFSWGMGTNLQLGTGEEEDEWSPVEMTGKQLENRVVLSVSSGGQHTV 409
Query: 398 VIV 400
++V
Sbjct: 410 LLV 412
Score = 136 (52.9 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 51/188 (27%), Positives = 82/188 (43%)
Query: 76 EGRCYTWGRNERGQLGHG-DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
+G G+ + GQLG G D ++R +P +V+ L + I +A AG HTV +++ GN F
Sbjct: 34 KGLVLVLGQGDVGQLGLGEDVMERKKPALVT-LPE-GIVQAVAGGMHTVCLSDTGNVYTF 91
Query: 135 GWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
G N G LG + E P + + E D S A + G+ +G
Sbjct: 92 GCNDEGALGRDTSEEGSETVPAKVDLGEKIIQVSAGD------SHSAALTEDGGVYVWGS 145
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
DN + + L + + + +VK+ G +H V + + G +YT G
Sbjct: 146 F---RDN-----NGVIGLLEPMKKCTVPVKVPIDKPVVKIVSGNDHLVMLTAHGELYTSG 197
Query: 255 FGGYGRLG 262
G G+LG
Sbjct: 198 CGEQGQLG 205
Score = 126 (49.4 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 34/108 (31%), Positives = 52/108 (48%)
Query: 212 LAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH--REQKDE 269
L + R + E IV+ G HTV + G VYT+G G LG E+ E
Sbjct: 50 LGEDVMERKKPALVTLPEGIVQAVAGGMHTVCLSDTGNVYTFGCNDEGALGRDTSEEGSE 109
Query: 270 WVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK-NNG 316
VP +VD+ ++ ++ +SAG +S+ G +Y+WG + NNG
Sbjct: 110 TVPAKVDLGEK--IIQ----VSAGDSHSAALTEDGGVYVWGSFRDNNG 151
>UNIPROTKB|I3L8I2 [details] [associations]
symbol:LOC100737658 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR000719 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104137 Ensembl:ENSSSCT00000025619
Uniprot:I3L8I2
Length = 676
Score = 222 (83.2 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 66/241 (27%), Positives = 116/241 (48%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G+L+ ++ PT + L+G ++ V C + H +A+ E + WGR + G+LG G +
Sbjct: 417 GSLN-DISQPTIVEALLGYEM--VQVACGASHVLALSTERELFAWGRGDGGRLGLGTRES 473
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
P +V + ++ G ++++T G +LA G N+ +LG + EP+P +
Sbjct: 474 HCCPQLVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSLGEEPAPHQ 533
Query: 158 CLVSEVTATACGADFTVWLSSVEGASILNAGL-PQYGQLGHGTDNEYNTKDSSVKLAYEA 216
+ VT T G+ + ++ +L+ L + + T S+ + A
Sbjct: 534 QVEEAVTFTPLGS------APLDQEPLLSVDLGTAHSAAVTXASGDCYTFGSNARRVSRA 587
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P + L G I VACG TVA+ ++G V++WG G GRLG R+ +D +PR V
Sbjct: 588 ---PCRVQGLQGIKISTVACGDAFTVAIGAEGEVFSWGKGARGRLG-RKDEDAGLPRPVQ 643
Query: 277 V 277
+
Sbjct: 644 L 644
Score = 178 (67.7 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 76/279 (27%), Positives = 118/279 (42%)
Query: 55 GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK 114
GV I+ VA G + C+ D G T+G G LGHG +PTIV L Y++ +
Sbjct: 381 GVTIKHVACGDLFTACLT-D-RGIIMTFGSGSNGCLGHGSLNDISQPTIVEALLGYEMVQ 438
Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFT 173
G SH + ++ + A+G G+LG G+ + P V E CG D +
Sbjct: 439 VACGASHVLALSTERELFAWGRGDGGRLGLGTRESHCCPQLVPMPPGQEAQRVVCGIDSS 498
Query: 174 VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP-RPRAIAALAGETIV 232
+ L+ V G + L G ++ +LG + + + + EA P A L E ++
Sbjct: 499 MILT-VPGQA-LACGSNRFNKLGLDPLS-LGEEPAPHQQVEEAVTFTPLGSAPLDQEPLL 555
Query: 233 KVACGTNHTVAVD-SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
V GT H+ AV + G YT FG R R P RV Q + + ++
Sbjct: 556 SVDLGTAHSAAVTXASGDCYT--FGSNARRVSR------APCRVQGLQGIKI----STVA 603
Query: 292 AGSVNSSCTAGGGQLYMWGK-----LKNNGDDWMYPKPL 325
G + G+++ WGK L +D P+P+
Sbjct: 604 CGDAFTVAIGAEGEVFSWGKGARGRLGRKDEDAGLPRPV 642
Score = 165 (63.1 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 82/327 (25%), Positives = 136/327 (41%)
Query: 96 IQRDRPTIVSEL----SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEI 151
I++ +P VS S IK G T +T+ G + FG +G LG GS+ +
Sbjct: 364 IEQPQPQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDIS 423
Query: 152 EPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSV 210
+P+ V L+ E+ ACGA + LS+ + G G+LG GT
Sbjct: 424 QPTIVEALLGYEMVQVACGASHVLALSTER--ELFAWGRGDGGRLGLGTR---------- 471
Query: 211 KLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQK--D 268
E+ P+ + G+ +V CG + ++ + G G + +LG +
Sbjct: 472 ----ESHCCPQLVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSLGE 527
Query: 269 EWVP-RRVD---VFQRNNVLP--PEAVISA--GSVNSSC-TAGGGQLYMWGKLKNNGDDW 319
E P ++V+ F P E ++S G+ +S+ T G Y +G N
Sbjct: 528 EPAPHQQVEEAVTFTPLGSAPLDQEPLLSVDLGTAHSAAVTXASGDCYTFGS--NARRVS 585
Query: 320 MYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV 378
P + L G + + G+ +GA+ SWG G LG + + +P+ V
Sbjct: 586 RAPCRVQGLQGIKISTVACGDAFTVAIGAEGEVFSWGKGARGRLGRK---DEDAGLPRPV 642
Query: 379 DILEGMH---VISVACGYGHSLVIVDR 402
L+ H V SV+C +G++L+ V R
Sbjct: 643 Q-LDETHPYTVTSVSCCHGNTLLAVRR 668
>UNIPROTKB|I3L5B6 [details] [associations]
symbol:LOC100737658 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR000719 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104137 Ensembl:ENSSSCT00000029356 OMA:PEREMAM
Uniprot:I3L5B6
Length = 680
Score = 222 (83.2 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 66/241 (27%), Positives = 116/241 (48%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G+L+ ++ PT + L+G ++ V C + H +A+ E + WGR + G+LG G +
Sbjct: 421 GSLN-DISQPTIVEALLGYEM--VQVACGASHVLALSTERELFAWGRGDGGRLGLGTRES 477
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
P +V + ++ G ++++T G +LA G N+ +LG + EP+P +
Sbjct: 478 HCCPQLVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSLGEEPAPHQ 537
Query: 158 CLVSEVTATACGADFTVWLSSVEGASILNAGL-PQYGQLGHGTDNEYNTKDSSVKLAYEA 216
+ VT T G+ + ++ +L+ L + + T S+ + A
Sbjct: 538 QVEEAVTFTPLGS------APLDQEPLLSVDLGTAHSAAVTXASGDCYTFGSNARRVSRA 591
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P + L G I VACG TVA+ ++G V++WG G GRLG R+ +D +PR V
Sbjct: 592 ---PCRVQGLQGIKISTVACGDAFTVAIGAEGEVFSWGKGARGRLG-RKDEDAGLPRPVQ 647
Query: 277 V 277
+
Sbjct: 648 L 648
Score = 178 (67.7 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 76/279 (27%), Positives = 118/279 (42%)
Query: 55 GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK 114
GV I+ VA G + C+ D G T+G G LGHG +PTIV L Y++ +
Sbjct: 385 GVTIKHVACGDLFTACLT-D-RGIIMTFGSGSNGCLGHGSLNDISQPTIVEALLGYEMVQ 442
Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFT 173
G SH + ++ + A+G G+LG G+ + P V E CG D +
Sbjct: 443 VACGASHVLALSTERELFAWGRGDGGRLGLGTRESHCCPQLVPMPPGQEAQRVVCGIDSS 502
Query: 174 VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP-RPRAIAALAGETIV 232
+ L+ V G + L G ++ +LG + + + + EA P A L E ++
Sbjct: 503 MILT-VPGQA-LACGSNRFNKLGLDPLS-LGEEPAPHQQVEEAVTFTPLGSAPLDQEPLL 559
Query: 233 KVACGTNHTVAVD-SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
V GT H+ AV + G YT FG R R P RV Q + + ++
Sbjct: 560 SVDLGTAHSAAVTXASGDCYT--FGSNARRVSR------APCRVQGLQGIKI----STVA 607
Query: 292 AGSVNSSCTAGGGQLYMWGK-----LKNNGDDWMYPKPL 325
G + G+++ WGK L +D P+P+
Sbjct: 608 CGDAFTVAIGAEGEVFSWGKGARGRLGRKDEDAGLPRPV 646
Score = 162 (62.1 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 81/325 (24%), Positives = 135/325 (41%)
Query: 96 IQRDRPTIVSEL----SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEI 151
I++ +P VS S IK G T +T+ G + FG +G LG GS+ +
Sbjct: 368 IEQPQPQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDIS 427
Query: 152 EPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSV 210
+P+ V L+ E+ ACGA + LS+ + G G+LG GT
Sbjct: 428 QPTIVEALLGYEMVQVACGASHVLALSTER--ELFAWGRGDGGRLGLGTR---------- 475
Query: 211 KLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQK--D 268
E+ P+ + G+ +V CG + ++ + G G + +LG +
Sbjct: 476 ----ESHCCPQLVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSLGE 531
Query: 269 EWVP-RRVD---VFQRNNVLP--PEAVISA--GSVNSSC-TAGGGQLYMWGKLKNNGDDW 319
E P ++V+ F P E ++S G+ +S+ T G Y +G N
Sbjct: 532 EPAPHQQVEEAVTFTPLGSAPLDQEPLLSVDLGTAHSAAVTXASGDCYTFGS--NARRVS 589
Query: 320 MYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV 378
P + L G + + G+ +GA+ SWG G LG + + +P+ V
Sbjct: 590 RAPCRVQGLQGIKISTVACGDAFTVAIGAEGEVFSWGKGARGRLGRK---DEDAGLPRPV 646
Query: 379 DILEGMH---VISVACGYGHSLVIV 400
L+ H V SV+C +G++L+ V
Sbjct: 647 Q-LDETHPYTVTSVSCCHGNTLLAV 670
>UNIPROTKB|F1LPM8 [details] [associations]
symbol:Herc6 "Protein Herc6" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
RGD:1561739 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
EMBL:AC126722 IPI:IPI00553869 Ensembl:ENSRNOT00000058626
ArrayExpress:F1LPM8 Uniprot:F1LPM8
Length = 1036
Score = 224 (83.9 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 75/262 (28%), Positives = 118/262 (45%)
Query: 22 LLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVD-IRFVAAGCVSC---HCVAVDVEG 77
LLF + +G L T+ RP + + V VSC H VAV +G
Sbjct: 42 LLFSNHRVYSCGDNSRGQLGQKSPQSTK-RPEEPIQALSTVHIDLVSCGKEHSVAVCHQG 100
Query: 78 RCYTWGRNERGQLGHGDKIQRD-RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
R +TWG GQLG G+ + PT ++ L+ KI + G H++ ++EDG ++G
Sbjct: 101 RVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGS 160
Query: 137 NKHGQLGSGS-IRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
N+ GQLG G+ + ++ P V+ L + A G + LS + G S G + GQ
Sbjct: 161 NRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLM-GTSF-GWGNNRSGQ 218
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
L +S K E +P +I AL +V ++CG HT + G V+T+G
Sbjct: 219 LA--------LSGNSAKA--EQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFG 268
Query: 255 FGGYGRLGHREQKDEWVPRRVD 276
+L H + P+ ++
Sbjct: 269 GSSSEQLQHSPRSGRGGPQLIE 290
Score = 204 (76.9 bits), Expect = 4.7e-13, P = 4.7e-13
Identities = 55/199 (27%), Positives = 97/199 (48%)
Query: 215 EAQPRPRA-IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD-EWVP 272
++ RP I AL+ I V+CG H+VAV +G V+TWG G G+LG E K+ ++P
Sbjct: 66 QSTKRPEEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMP 125
Query: 273 RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPL 325
+++ ++ +S G +S + GQ++ WG L NN P+ +
Sbjct: 126 TKINSLAGIKIIQ----VSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKV 181
Query: 326 MDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAM--PKKVDILE 382
L G L + +G H F + + WG+ + G+L K+ + P + L+
Sbjct: 182 KSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKAEQIYKPHSIGALK 241
Query: 383 GMHVISVACGYGHSLVIVD 401
++V+ ++CGY H+ V+ +
Sbjct: 242 TLNVVYISCGYEHTSVLTE 260
Score = 197 (74.4 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 71/271 (26%), Positives = 116/271 (42%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTI-VS 105
P RL G+ + A+G H + + R Y+ G N RGQLG RP +
Sbjct: 19 PRRLEAGTGLKLLKAASG--ERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEEPIQ 76
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN-EIEPSPVRCLVS-EV 163
LS I G+ H+V V G +G GQLG G + P+ + L ++
Sbjct: 77 ALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIKI 136
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
+CG ++ LS E + + G + GQLG G + L +A P+ +
Sbjct: 137 IQVSCGHYHSLALS--EDGQVFSWGSNRQGQLGLGNN-----------LCSQASPQK--V 181
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRL---GHREQKDE-WVPRRVDVFQ 279
+L G + +VA G H+ A+ G + WG G+L G+ + ++ + P + +
Sbjct: 182 KSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKAEQIYKPHSIGALK 241
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
NV+ IS G ++S GQ++ +G
Sbjct: 242 TLNVV----YISCGYEHTSVLTEDGQVFTFG 268
Score = 159 (61.0 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 49/189 (25%), Positives = 85/189 (44%)
Query: 219 RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
+PR + A G ++K A G H++ + S VY+ G G+LG + + P +
Sbjct: 18 QPRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPE--EPI 75
Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLSGW 331
Q + + + ++S G +S G+++ WG + + + P + L+G
Sbjct: 76 QALSTVHID-LVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGI 134
Query: 332 NLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVA 390
+ + G+ H + D SWG + G+LG G S A P+KV LEG+ + VA
Sbjct: 135 KIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGN-NLCSQASPQKVKSLEGIPLAQVA 193
Query: 391 CGYGHSLVI 399
G HS +
Sbjct: 194 AGGTHSFAL 202
Score = 144 (55.7 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 42/152 (27%), Positives = 66/152 (43%)
Query: 30 WDAVGRRKGALDGNL---VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNE 86
W + + + L NL SP +++ L G+ + VAAG H A+ + G + WG N
Sbjct: 158 WGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAG--GTHSFALSLMGTSFGWGNNR 215
Query: 87 RGQL---GHGDKIQRD-RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQL 142
GQL G+ K ++ +P + L + G HT V+TEDG FG + QL
Sbjct: 216 SGQLALSGNSAKAEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQL 275
Query: 143 GSGSIRNEIEPSPVRCLVSEVTATACGADFTV 174
P + + V+ CG+ T+
Sbjct: 276 QHSPRSGRGGPQLIEGIGGHVSQIECGSYHTI 307
>RGD|1561739 [details] [associations]
symbol:Herc6 "HECT and RLD domain containing E3 ubiquitin
protein ligase family member 6" species:10116 "Rattus norvegicus"
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 RGD:1561739 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
HOGENOM:HOG000208452 HOVERGEN:HBG050878 OrthoDB:EOG4N30N6
IPI:IPI00553869 EMBL:BC085921 UniGene:Rn.107120
ProteinModelPortal:Q5U2P8 PhosphoSite:Q5U2P8 UCSC:RGD:1561739
InParanoid:Q5U2P8 ArrayExpress:Q5U2P8 Genevestigator:Q5U2P8
Uniprot:Q5U2P8
Length = 1034
Score = 223 (83.6 bits), Expect = 3.4e-15, P = 3.4e-15
Identities = 75/261 (28%), Positives = 117/261 (44%)
Query: 22 LLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSC---HCVAVDVEGR 78
LLF + +G L T+ RP + V VSC H VAV +GR
Sbjct: 42 LLFSNHRVYSCGDNSRGQLGQKSPQSTK-RPEPIQALSTVHIDLVSCGKEHSVAVCHQGR 100
Query: 79 CYTWGRNERGQLGHGDKIQRD-RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
+TWG GQLG G+ + PT ++ L+ KI + G H++ ++EDG ++G N
Sbjct: 101 VFTWGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSN 160
Query: 138 KHGQLGSGS-IRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
+ GQLG G+ + ++ P V+ L + A G + LS + G S G + GQL
Sbjct: 161 RQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLM-GTSF-GWGNNRSGQL 218
Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
+S K E +P +I AL +V ++CG HT + G V+T+G
Sbjct: 219 A--------LSGNSAK---EQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGG 267
Query: 256 GGYGRLGHREQKDEWVPRRVD 276
+L H + P+ ++
Sbjct: 268 SSSEQLQHSPRSGRGGPQLIE 288
Score = 210 (79.0 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 71/269 (26%), Positives = 115/269 (42%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P RL G+ + A+G H + + R Y+ G N RGQLG RP +
Sbjct: 19 PRRLEAGTGLKLLKAASG--ERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQA 76
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN-EIEPSPVRCLVS-EVT 164
LS I G+ H+V V G +G GQLG G + P+ + L ++
Sbjct: 77 LSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIKII 136
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
+CG ++ LS E + + G + GQLG G + L +A P+ +
Sbjct: 137 QVSCGHYHSLALS--EDGQVFSWGSNRQGQLGLGNN-----------LCSQASPQK--VK 181
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRL---GHREQKDEWVPRRVDVFQRN 281
+L G + +VA G H+ A+ G + WG G+L G+ ++ + P + +
Sbjct: 182 SLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTL 241
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
NV+ IS G ++S GQ++ +G
Sbjct: 242 NVV----YISCGYEHTSVLTEDGQVFTFG 266
Score = 190 (71.9 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 77/320 (24%), Positives = 143/320 (44%)
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
R +P + + K+ KA +G H++++ + + G N GQLG S ++ P P++
Sbjct: 16 RRQPRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQ 75
Query: 158 CLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
L + + +CG + +V + +G + G GQLG G E +++
Sbjct: 76 ALSTVHIDLVSCGKEHSVAVCH-QGR-VFTWGAGSEGQLGIGESKE---------ISF-- 122
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQK-DEWVPRRV 275
P I +LAG I++V+CG H++A+ G V++WG G+LG + P++V
Sbjct: 123 --MPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKV 180
Query: 276 DVFQRNNVLPPEAVISAGSVNSSCTAGG----------GQLYMWGKLKNNGDDWMY-PKP 324
+ +P V + G+ + + + G GQL + G N+ + +Y P
Sbjct: 181 KSLEG---IPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSG---NSAKEQIYKPHS 234
Query: 325 LMDLSGWNLRCMDSGNMHHFV-GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
+ L N+ + G H V D ++G + +L + P + P+ ++ + G
Sbjct: 235 IGALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGG--PQLIEGIGG 292
Query: 384 MHVISVACGYGHSLVIVDRT 403
HV + CG H++ V T
Sbjct: 293 -HVSQIECGSYHTIAYVYTT 311
Score = 150 (57.9 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 43/151 (28%), Positives = 65/151 (43%)
Query: 30 WDAVGRRKGALDGNL---VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNE 86
W + + + L NL SP +++ L G+ + VAAG H A+ + G + WG N
Sbjct: 157 WGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAG--GTHSFALSLMGTSFGWGNNR 214
Query: 87 RGQL---GHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG 143
GQL G+ K Q +P + L + G HT V+TEDG FG + QL
Sbjct: 215 SGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQ 274
Query: 144 SGSIRNEIEPSPVRCLVSEVTATACGADFTV 174
P + + V+ CG+ T+
Sbjct: 275 HSPRSGRGGPQLIEGIGGHVSQIECGSYHTI 305
>MGI|MGI:1344037 [details] [associations]
symbol:Rpgr "retinitis pigmentosa GTPase regulator"
species:10090 "Mus musculus" [GO:0001750 "photoreceptor outer
segment" evidence=ISO] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005929
"cilium" evidence=IDA] [GO:0007601 "visual perception"
evidence=ISO;IMP] [GO:0030030 "cell projection organization"
evidence=IEA] [GO:0042384 "cilium assembly" evidence=ISO]
[GO:0042462 "eye photoreceptor cell development" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0050896 "response
to stimulus" evidence=IEA] MGI:MGI:1344037 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005794 GO:GO:0005737 GO:GO:0005813
GO:GO:0005929 GO:GO:0007601 GO:GO:0050896 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042073
eggNOG:COG5184 GO:GO:0036064 GO:GO:0042462
GeneTree:ENSGT00700000104160 GO:GO:0036126 CTD:6103
HOGENOM:HOG000231314 HOVERGEN:HBG026899 ChiTaRS:RPGR EMBL:AF044677
EMBL:AJ238396 EMBL:AJ318464 EMBL:AL671042 EMBL:AK017192
EMBL:BX005236 EMBL:HQ260316 IPI:IPI00122416 IPI:IPI00128188
IPI:IPI00230648 IPI:IPI00230650 RefSeq:NP_001171421.1
RefSeq:NP_035415.1 UniGene:Mm.247556 ProteinModelPortal:Q9R0X5
SMR:Q9R0X5 DIP:DIP-46319N STRING:Q9R0X5 PhosphoSite:Q9R0X5
PRIDE:Q9R0X5 Ensembl:ENSMUST00000044598 GeneID:19893 KEGG:mmu:19893
UCSC:uc009sqj.2 InParanoid:Q9R0X5 NextBio:297416 CleanEx:MM_RPGR
Genevestigator:Q9R0X5 GermOnline:ENSMUSG00000031174 Uniprot:Q9R0X5
Length = 1001
Score = 221 (82.9 bits), Expect = 5.5e-15, P = 5.5e-15
Identities = 77/293 (26%), Positives = 138/293 (47%)
Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWL 176
G HT +VT + FG N GQLG GS I+P+ ++ L E V ACG + T L
Sbjct: 43 GDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT--L 100
Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC 236
S + + AG GQLG G ++ +D+ ++ + P +TI +++
Sbjct: 101 VSTDTGGVYAAGGNNEGQLGLGDTDD---RDTFHQIVFFT---P-------ADTIKQLSA 147
Query: 237 GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVN 296
G N + A+ G ++ WG G++G ++ + +P V V + P + IS G +
Sbjct: 148 GANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGK------PISWISCGYYH 201
Query: 297 SSCTAGGGQLYMWGKLKNNGDDWMYPKPLMD------LSGWNLRCMD--SGNMHHFVGAD 348
S+ G+LY +G+ NG + + LM+ + G R + G H V +
Sbjct: 202 SAFVTMDGELYTFGE-PENGKLGLPNELLMNHRSPQRVLGIPERVIQVACGGGHTVVLTE 260
Query: 349 SSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
++G Q+G+LG G + ++S PK ++ ++ + ++CG H+ ++ +
Sbjct: 261 KVVYAFGLGQFGQLGLGTFLFETSE-PKIIERIKDQKICHISCGENHTALMTE 312
Score = 200 (75.5 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 70/242 (28%), Positives = 107/242 (44%)
Query: 22 LLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
L GS W +G A ++ PT ++ L ++ A G H + G Y
Sbjct: 56 LYMFGSNNWGQLGLGSKAA---IIKPTCIKALKPEKVKLAACG--RNHTLVSTDTGGVYA 110
Query: 82 WGRNERGQLGHGDKIQRDR-PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
G N GQLG GD RD IV IK+ AG + + +TEDG +G N G
Sbjct: 111 AGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALTEDGKLFMWGDNSEG 170
Query: 141 QLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTD 200
Q+G N P V + ++ +CG + +++ ++G + G P+ G+LG
Sbjct: 171 QIGLEDKSNVCIPHEVT-VGKPISWISCGYYHSAFVT-MDG-ELYTFGEPENGKLG--LP 225
Query: 201 NEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGR 260
NE S P+ + + E +++VACG HTV + K VY +G G +G+
Sbjct: 226 NELLMNHRS----------PQRVLGIP-ERVIQVACGGGHTVVLTEK-VVYAFGLGQFGQ 273
Query: 261 LG 262
LG
Sbjct: 274 LG 275
Score = 198 (74.8 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 95/354 (26%), Positives = 148/354 (41%)
Query: 65 CVSC---HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSH 121
C+SC H V + Y +G N GQLG G K +PT + L K+K A GR+H
Sbjct: 39 CLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNH 98
Query: 122 TVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEG 181
T+V T+ G A G N GQLG G + R ++ AD LS+ G
Sbjct: 99 TLVSTDTGGVYAAGGNNEGQLGLGDTDD-------RDTFHQIVFFT-PADTIKQLSA--G 148
Query: 182 ASILNAGLPQYGQL---GHGTDNEYNTKD-SSVKLAYEAQPRPRAIAALAGETIVKVACG 237
A+ +A L + G+L G ++ + +D S+V + +E G+ I ++CG
Sbjct: 149 ANT-SAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVT---------VGKPISWISCG 198
Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLG--------HRE-QKDEWVPRRVDVFQ---RNNVLP 285
H+ V G +YT+G G+LG HR Q+ +P RV + V+
Sbjct: 199 YYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPERVIQVACGGGHTVVL 258
Query: 286 PEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV 345
E V+ A + GQL + L + PK + + + + G H +
Sbjct: 259 TEKVVYAFGLGQF-----GQLGLGTFLFETSE----PKIIERIKDQKICHISCGENHTAL 309
Query: 346 GADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLV 398
+ + ++G ++G+LG G + P V +ACG H LV
Sbjct: 310 MTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLV 363
Score = 163 (62.4 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 55/191 (28%), Positives = 85/191 (44%)
Query: 219 RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
+P I AL E + ACG NHT+ G VY G G+LG + D ++ F
Sbjct: 77 KPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFF 136
Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPK-----PLMDLSGWNL 333
+ + +SAG+ S+ G+L+MWG + G + K P G +
Sbjct: 137 TPADTIKQ---LSAGANTSAALTEDGKLFMWGD-NSEGQIGLEDKSNVCIPHEVTVGKPI 192
Query: 334 RCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV-DILEGMHVISVAC 391
+ G H FV D ++G + G+LG + P++V I E VI VAC
Sbjct: 193 SWISCGYYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPE--RVIQVAC 250
Query: 392 GYGHSLVIVDR 402
G GH++V+ ++
Sbjct: 251 GGGHTVVLTEK 261
>MGI|MGI:2444156 [details] [associations]
symbol:Rccd1 "RCC1 domain containing 1" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] MGI:MGI:2444156
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005886 GO:GO:0005737
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 CTD:91433 HOGENOM:HOG000154085 HOVERGEN:HBG061852
OMA:ERPGAWF OrthoDB:EOG41NTMF EMBL:AK030872 EMBL:AK084219
EMBL:AK088662 EMBL:BC069844 IPI:IPI00881984 IPI:IPI00896067
RefSeq:NP_775621.2 UniGene:Mm.474502 ProteinModelPortal:Q8BTU7
SMR:Q8BTU7 PhosphoSite:Q8BTU7 PRIDE:Q8BTU7
Ensembl:ENSMUST00000047362 Ensembl:ENSMUST00000121882 GeneID:269955
KEGG:mmu:269955 UCSC:uc009ial.2 GeneTree:ENSGT00700000104312
InParanoid:Q8BTU7 NextBio:393123 Bgee:Q8BTU7 Genevestigator:Q8BTU7
Uniprot:Q8BTU7
Length = 377
Score = 135 (52.6 bits), Expect = 6.1e-15, Sum P(2) = 6.1e-15
Identities = 25/74 (33%), Positives = 40/74 (54%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H + + G+ ++WG GQLGHG P ++ L ++ K AG H+V ++E
Sbjct: 172 HVLLLCAAGQVFSWGAGRHGQLGHGTLEAELEPRLLEALQGLRMAKVAAGGWHSVCLSET 231
Query: 129 GNSLAFGWNKHGQL 142
G+ +GWN+ GQL
Sbjct: 232 GDIYIWGWNESGQL 245
Score = 133 (51.9 bits), Expect = 7.2e-07, Sum P(2) = 7.2e-07
Identities = 54/208 (25%), Positives = 89/208 (42%)
Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGAD 171
I + AG S+T +VT G G G+ ++ S LV +
Sbjct: 42 ICQVSAGWSYTALVTRGGRVELSG----SVSGAADGCRDVWASE-ELLVLLRNKGGSSTE 96
Query: 172 FTVWL--SSVEGASILNAGLPQYGQLGHGTDN-EYNTKDSSVKL-----AYEAQPRPRAI 223
W+ S+++G + L G G G D ++ ++ L AY P P
Sbjct: 97 VQAWVPGSALQGEPLWVQNLVS-GAKGQGEDEPSRESRMGTLPLLPCARAY-VTPEPPFC 154
Query: 224 AALAGETIVK-VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
LA E V+ + G H + + + G V++WG G +G+LGH + E PR ++ Q
Sbjct: 155 QPLAPELRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAELEPRLLEALQGLR 214
Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+ A ++AG +S C + G +Y+WG
Sbjct: 215 M----AKVAAGGWHSVCLSETGDIYIWG 238
Score = 126 (49.4 bits), Expect = 6.1e-15, Sum P(2) = 6.1e-15
Identities = 28/82 (34%), Positives = 39/82 (47%)
Query: 198 GTDNEYNTKDSSVKLAYEA-QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
G E D+ + A QP P + G V +CG+ HT V G +YTWG+G
Sbjct: 269 GLKEELAVADAGAPAHFIAIQPFPALLDLPLGSDAVMASCGSRHTAVVTRTGELYTWGWG 328
Query: 257 GYGRLGHREQKDEWVPRRVDVF 278
YG+LGH++ P V+ F
Sbjct: 329 KYGQLGHKDSTSLDRPCCVEYF 350
Score = 113 (44.8 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 37/118 (31%), Positives = 53/118 (44%)
Query: 148 RNEIEPSPVRC--LVSE--VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEY 203
R + P P C L E V GA+ + L + + + G ++GQLGHGT
Sbjct: 144 RAYVTPEPPFCQPLAPELRVRQLELGAEHVLLLCAA--GQVFSWGAGRHGQLGHGT---- 197
Query: 204 NTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRL 261
EA+ PR + AL G + KVA G H+V + G +Y WG+ G+L
Sbjct: 198 ----------LEAELEPRLLEALQGLRMAKVAAGGWHSVCLSETGDIYIWGWNESGQL 245
Score = 99 (39.9 bits), Expect = 4.1e-11, Sum P(2) = 4.1e-11
Identities = 28/104 (26%), Positives = 51/104 (49%)
Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACG 169
++++ G H +++ G ++G +HGQLG G++ E+EP + L + A G
Sbjct: 162 RVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAELEPRLLEALQGLRMAKVAAG 221
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLG----HGTDNEYNTKDSS 209
+V LS E I G + GQL GT+N+ ++++
Sbjct: 222 GWHSVCLS--ETGDIYIWGWNESGQLALPTRSGTENKAEREEAT 263
Score = 94 (38.1 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 23/58 (39%), Positives = 26/58 (44%)
Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS---EVTATACG 169
A G HT VVT G +GW K+GQLG + P V V EV A CG
Sbjct: 306 ASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSLDRPCCVEYFVERQLEVRAVTCG 363
Score = 93 (37.8 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 39/119 (32%), Positives = 54/119 (45%)
Query: 22 LLFCGST---CWDAVGRR----KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVD 74
LL C + W A GR G L+ L P L L G+ + VAAG H V +
Sbjct: 174 LLLCAAGQVFSWGA-GRHGQLGHGTLEAEL-EPRLLEALQGLRMAKVAAG--GWHSVCLS 229
Query: 75 VEGRCYTWGRNERGQL------GHGDKIQRDRPTIVSELS-KYKIKKAGAGR-SHTVVV 125
G Y WG NE GQL G +K +R+ T ++E K ++ A AG +H + +
Sbjct: 230 ETGDIYIWGWNESGQLALPTRSGTENKAEREEATELNEDGLKEELAVADAGAPAHFIAI 288
Score = 58 (25.5 bits), Expect = 6.5e-08, Sum P(2) = 6.5e-08
Identities = 23/85 (27%), Positives = 35/85 (41%)
Query: 151 IEPSPVRC---LVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD 207
I+P P L S+ +CG+ T ++ + G +YGQLGH D+ +
Sbjct: 288 IQPFPALLDLPLGSDAVMASCGSRHTAVVTRT--GELYTWGWGKYGQLGH-KDSTSLDRP 344
Query: 208 SSVKLAYEAQPRPRAIAALAGETIV 232
V+ E Q RA+ T V
Sbjct: 345 CCVEYFVERQLEVRAVTCGPWNTYV 369
Score = 50 (22.7 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 19/74 (25%), Positives = 30/74 (40%)
Query: 322 PKP-LMDLS-GWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV 378
P P L+DL G + G+ H V +WG +YG+LG+ +
Sbjct: 290 PFPALLDLPLGSDAVMASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSLDRPCCVEY 349
Query: 379 DILEGMHVISVACG 392
+ + V +V CG
Sbjct: 350 FVERQLEVRAVTCG 363
Score = 47 (21.6 bits), Expect = 8.8e-07, Sum P(2) = 8.8e-07
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 284 LPPEAVI-SAGSVNSSCTAGGGQLYMWG 310
L +AV+ S GS +++ G+LY WG
Sbjct: 299 LGSDAVMASCGSRHTAVVTRTGELYTWG 326
Score = 43 (20.2 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 375 PKKVDILEGMHVISVACGYGHSLVIVDRTNVGE 407
P +D+ G + +CG H+ V+ T GE
Sbjct: 292 PALLDLPLGSDAVMASCGSRHTAVV---TRTGE 321
>UNIPROTKB|Q86SG6 [details] [associations]
symbol:NEK8 "Serine/threonine-protein kinase Nek8"
species:9606 "Homo sapiens" [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0072372 "primary cilium" evidence=ISS]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 GO:GO:0005737 GO:GO:0005856
GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372
EMBL:CH471159 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 KO:K08857 Orphanet:655 EMBL:AC010761 CTD:284086
HOGENOM:HOG000006908 HOVERGEN:HBG098799 EMBL:AY242354 EMBL:AY267371
EMBL:BC112240 EMBL:BC113705 EMBL:AL833909 IPI:IPI00328397
RefSeq:NP_835464.1 UniGene:Hs.448468 ProteinModelPortal:Q86SG6
SMR:Q86SG6 IntAct:Q86SG6 STRING:Q86SG6 PhosphoSite:Q86SG6
DMDM:34098463 PaxDb:Q86SG6 PRIDE:Q86SG6 DNASU:284086
Ensembl:ENST00000268766 GeneID:284086 KEGG:hsa:284086
UCSC:uc002hcp.3 GeneCards:GC17P027055 HGNC:HGNC:13387 HPA:HPA040661
HPA:HPA040679 MIM:609799 MIM:613824 neXtProt:NX_Q86SG6
PharmGKB:PA38361 InParanoid:Q86SG6 OMA:EREVFAW OrthoDB:EOG4PZJ65
GenomeRNAi:284086 NextBio:94527 ArrayExpress:Q86SG6 Bgee:Q86SG6
CleanEx:HS_NEK8 Genevestigator:Q86SG6 GermOnline:ENSG00000160602
Uniprot:Q86SG6
Length = 692
Score = 218 (81.8 bits), Expect = 6.7e-15, P = 6.7e-15
Identities = 65/243 (26%), Positives = 115/243 (47%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G+L ++ PT + L+G ++ V C + H +A+ E + WGR + G+LG G +
Sbjct: 426 GSLT-DISQPTIVEALLGYEM--VQVACGASHVLALSTERELFAWGRGDSGRLGLGTRES 482
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
P V + ++ G ++++T G +LA G N+ +LG + EP P +
Sbjct: 483 HSCPQQVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDHLSLGEEPVPHQ 542
Query: 158 CLVSEVTATACGA---DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
+ ++ T G+ D LS ++ + +A + G N++ ++ +
Sbjct: 543 QVEEALSFTLLGSAPLDQEPLLS-IDLGTAHSAAVTASGDCYTFGSNQHGQLGTNTRRGS 601
Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
A P + L G + VACG TVA+ ++ VY+WG G GRLG R++ D +PR
Sbjct: 602 RA---PCKVQGLEGIKMAMVACGDAFTVAIGAESEVYSWGKGARGRLGRRDE-DAGLPRP 657
Query: 275 VDV 277
V +
Sbjct: 658 VQL 660
Score = 215 (80.7 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 75/279 (26%), Positives = 121/279 (43%)
Query: 55 GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK 114
GV I+ VA G C+ D G T+G G LGHG +PTIV L Y++ +
Sbjct: 390 GVTIKHVACGDFFTACLT-D-RGIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQ 447
Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFT 173
G SH + ++ + A+G G+LG G+ + P V E CG D +
Sbjct: 448 VACGASHVLALSTERELFAWGRGDSGRLGLGTRESHSCPQQVPMPPGQEAQRVVCGIDSS 507
Query: 174 VWLSSVEGASILNAGLPQYGQLG--HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
+ L+ V G + L G ++ +LG H + E V+ A A L E +
Sbjct: 508 MILT-VPGQA-LACGSNRFNKLGLDHLSLGEEPVPHQQVEEALSFTLL--GSAPLDQEPL 563
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
+ + GT H+ AV + G YT+G +G+LG ++ P +V + + A+++
Sbjct: 564 LSIDLGTAHSAAVTASGDCYTFGSNQHGQLGTNTRRGSRAPCKVQGLEGIKM----AMVA 619
Query: 292 AGSVNSSCTAGGGQLYMWGK-----LKNNGDDWMYPKPL 325
G + ++Y WGK L +D P+P+
Sbjct: 620 CGDAFTVAIGAESEVYSWGKGARGRLGRRDEDAGLPRPV 658
Score = 97 (39.2 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 30/100 (30%), Positives = 48/100 (48%)
Query: 217 QPRPRAIAAL----AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
QP+P+ I+ +G TI VACG T + +G + T+G G G LGH D P
Sbjct: 375 QPQPQFISRFLEGQSGVTIKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQP 434
Query: 273 RRVDVFQRNNVLPPEAV-ISAGSVNSSCTAGGGQLYMWGK 311
V+ +L E V ++ G+ + + +L+ WG+
Sbjct: 435 TIVEA-----LLGYEMVQVACGASHVLALSTERELFAWGR 469
Score = 90 (36.7 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 24/68 (35%), Positives = 35/68 (51%)
Query: 333 LRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVAC 391
L +D G H V A C ++G Q+G+LG ++ S P KV LEG+ + VAC
Sbjct: 563 LLSIDLGTAHSAAVTASGDCYTFGSNQHGQLGTNT--RRGSRAPCKVQGLEGIKMAMVAC 620
Query: 392 GYGHSLVI 399
G ++ I
Sbjct: 621 GDAFTVAI 628
>UNIPROTKB|I3LT85 [details] [associations]
symbol:RCC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051225 "spindle assembly" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0031492 "nucleosomal DNA binding" evidence=IEA]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=IEA] [GO:0007088 "regulation of mitosis" evidence=IEA]
[GO:0007059 "chromosome segregation" evidence=IEA] [GO:0007052
"mitotic spindle organization" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005087 "Ran guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0000794 "condensed
nuclear chromosome" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
GO:GO:0007088 GO:GO:0007059 GO:GO:0007052 GO:GO:0051225
GO:GO:0000082 GO:GO:0031965 GO:GO:0000790 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0000794 GO:GO:0005087
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0007090 GO:GO:0031492 GeneTree:ENSGT00700000104160 KO:K11493
CTD:1104 OMA:GTESCFV EMBL:FP565629 RefSeq:XP_003482053.1
Ensembl:ENSSSCT00000028011 GeneID:100621543 KEGG:ssc:100621543
Uniprot:I3LT85
Length = 421
Score = 212 (79.7 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 92/369 (24%), Positives = 155/369 (42%)
Query: 49 RLRP-LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR--PTIVS 105
R +P LV + V A H V + G+ Y++G N+ G LG ++ P V
Sbjct: 57 RKKPALVPIPEDIVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKV- 115
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW--NKHGQLGS-GSIRNEIEPSPVRCLVSE 162
EL + K+ + AG SHT +TEDG +G + +G +G ++ + P V+ L
Sbjct: 116 ELQE-KVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQ-LSMP 173
Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
V A G D V L++ +G + G + GQLG + + L P+
Sbjct: 174 VVKVASGNDHLVMLTA-DG-ELYTLGSGEQGQLGR-VPELFANRGGRQGLERLLVPKCVM 230
Query: 223 IAALAGETIVKVA---CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
+ + V+ CG T A+ S+G+VY +G Y +LG + +VP+ + F+
Sbjct: 231 LKSRGSRGHVRFQDAFCGAYFTFAISSEGHVYGFGLSNYHQLGTPGTESCFVPQNLTSFK 290
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLSGWN 332
N S G ++ C G+ Y G+ L ++ P + L +
Sbjct: 291 --NSTKSWVRFSGGQHHTVCMDSEGRAYSLGRAEYGRLGLGEGAEEKSVPTLISRLPAVS 348
Query: 333 -LRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVAC 391
+ C ++ + V D +WG +LG G S + LE V+SV+
Sbjct: 349 SVAC--GASVGYAVTKDGRVFAWGMGTNYQLGTGQEEDAWSPVEMTGKQLENRMVLSVSS 406
Query: 392 GYGHSLVIV 400
G H++++V
Sbjct: 407 GGQHTVLLV 415
Score = 142 (55.0 bits), Expect = 9.0e-07, P = 9.0e-07
Identities = 55/189 (29%), Positives = 85/189 (44%)
Query: 77 GRCYTWGRNERGQLGHGDKI-QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G T G+ + GQLG G+ + +R +P +V I +A AG HTV +++ G +FG
Sbjct: 35 GLVLTLGQGDVGQLGLGENVMERKKPALVP--IPEDIVQAEAGGMHTVCLSKSGQVYSFG 92
Query: 136 WNKHGQLGSG-SIR-NEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
N G LG S+ +E+ P V L +V + G T L+ +G L +G
Sbjct: 93 CNDEGALGRDTSVEGSEMVPGKVE-LQEKVVQVSAGDSHTAALTE-DGRVFL------WG 144
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
DN + + L + + +VKVA G +H V + + G +YT
Sbjct: 145 SF---RDN-----NGVIGLLEPMKKSMVPVQVQLSMPVVKVASGNDHLVMLTADGELYTL 196
Query: 254 GFGGYGRLG 262
G G G+LG
Sbjct: 197 GSGEQGQLG 205
>UNIPROTKB|Q74DR4 [details] [associations]
symbol:GSU1251 "ATS1 domain repeat protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
Gene3D:2.60.40.360 InterPro:IPR008962 InterPro:IPR011040
SUPFAM:SSF50939 RefSeq:NP_952304.1 ProteinModelPortal:Q74DR4
GeneID:2688149 KEGG:gsu:GSU1251 PATRIC:22025273
HOGENOM:HOG000144307 OMA:QADGTLW
BioCyc:GSUL243231:GH27-1279-MONOMER Uniprot:Q74DR4
Length = 2082
Score = 220 (82.5 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 106/389 (27%), Positives = 164/389 (42%)
Query: 26 GSTCWDAVGRR--KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWG 83
GS + +G+ G L N SP R+ G D V+AG ++ + D G ++WG
Sbjct: 105 GSNLFGQLGQPLVNGQLATNKFSPIRIG--TGNDWVAVSAGELTSFGLKGD--GTLWSWG 160
Query: 84 RNERGQLGHGDKIQRDRPT-IVSE-LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
N G+LG G + R +P +V++ LS + AG H + + DG A+G N GQ
Sbjct: 161 NNLFGELGDGTTVSRPQPVQVVADPLSNGRYVAVAAGGEHALALQADGTLWAWGANLTGQ 220
Query: 142 LGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTD 200
LG+G P+P++ + TA + G +V L + +G S+ + G +G+LG+G
Sbjct: 221 LGTGGTGILPNPTPLKIGTDRDWTAISAGEMHSVALKA-DG-SLWSWGQNLFGELGNG-- 276
Query: 201 NEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGR 260
V L P + G V +A G HTVA+ G V WG G
Sbjct: 277 ---------VALPGANVTTPTRVGT--GSDWVAIAAGALHTVALHRNGTVSAWGNNAQGA 325
Query: 261 LGHREQKDEWVPRRV--DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKN 314
+G + P + V NNV I+AG+ S G ++ WG
Sbjct: 326 VGDGTVANRSTPTLIVAPVTLVNNV-----AIAAGTGVSFSVLANGTVFGWGGNGAGQLG 380
Query: 315 NGDDWMYPKPLM---DLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKS 371
NG P + S W L G + ++ + +WG G+LG G
Sbjct: 381 NGTFGAVTAPTVLSAGASAW-LGVEPGGAFSLGLRSNGTLWAWGGNASGQLGDGT--TTP 437
Query: 372 SAMPKKVDILEGM-HVISVACGYGHSLVI 399
SA+P V ++ G + + A G HS+ +
Sbjct: 438 SAIP--VPVVGGAGNWRTTATGTAHSVAV 464
Score = 207 (77.9 bits), Expect = 5.2e-13, P = 5.2e-13
Identities = 102/384 (26%), Positives = 158/384 (41%)
Query: 28 TCWDAVGRRKGAL-DGNLVSPTRLRPLVGVDI---RFVAAGCVSCHCVAVDVEGRCYTWG 83
T W G L DG VS + +V + R+VA H +A+ +G + WG
Sbjct: 155 TLWSWGNNLFGELGDGTTVSRPQPVQVVADPLSNGRYVAVAAGGEHALALQADGTLWAWG 214
Query: 84 RNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG 143
N GQLG G PT + + AG H+V + DG+ ++G N G+LG
Sbjct: 215 ANLTGQLGTGGTGILPNPTPLKIGTDRDWTAISAGEMHSVALKADGSLWSWGQNLFGELG 274
Query: 144 SG-SIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDN 201
+G ++ +P R S+ A A GA TV L ++ G G +G GT
Sbjct: 275 NGVALPGANVTTPTRVGTGSDWVAIAAGALHTVALH--RNGTVSAWGNNAQGAVGDGT-- 330
Query: 202 EYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRL 261
+A + P +A + V +A GT + +V + G V+ WG G G+L
Sbjct: 331 ----------VANRSTPT-LIVAPVTLVNNVAIAAGTGVSFSVLANGTVFGWGGNGAGQL 379
Query: 262 GHREQKDEWVPRRVDVFQRNNV-LPPEAVISAG-SVNSSCTAGGGQLYMWGKLKNNGDD- 318
G+ P + + + P S G N + A GG G+L +
Sbjct: 380 GNGTFGAVTAPTVLSAGASAWLGVEPGGAFSLGLRSNGTLWAWGGNAS--GQLGDGTTTP 437
Query: 319 WMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
P P++ +G N R +G H V AD + +WG G+LG G +++ P++
Sbjct: 438 SAIPVPVVGGAG-NWRTTATGTAHSVAVRADGTLWAWGDNSSGQLGIG--STVAASTPQQ 494
Query: 378 VDILE----GMHVISVACGYGHSL 397
+ + G +VA G HSL
Sbjct: 495 ITVTNPASAGNDWTAVAGGGAHSL 518
Score = 180 (68.4 bits), Expect = 5.1e-10, P = 5.1e-10
Identities = 80/311 (25%), Positives = 125/311 (40%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G + WG N GQLG G P +V ++ G +H+V V DG A+G
Sbjct: 417 GTLWAWGGNASGQLGDGTTTPSAIPVPVVGGAGNWRT--TATGTAHSVAVRADGTLWAWG 474
Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLV-----SEVTATACGADFTVWLSSVEGASILNAGLP 190
N GQLG GS P + ++ TA A G ++ L + +G ++ + G
Sbjct: 475 DNSSGQLGIGSTVAASTPQQITVTNPASAGNDWTAVAGGGAHSLGLKA-DG-TLWSWGDN 532
Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
+GQLG GT T + V++ P V VA G ++A+ + G +
Sbjct: 533 TFGQLGDGTGTSNRT--TPVQIV-TGNP------GNFDRNWVAVAAGGVFSLALQADGTI 583
Query: 251 YTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV-------ISAGSVNSSCTAGG 303
+TWG +LG +R Q PP I+AG +
Sbjct: 584 WTWGDNSLLQLGTDPAMLTPATQRNVPAQLAVASPPSTAFNSSWVAIAAGQDHGLSLQAD 643
Query: 304 GQLYMWG-----KLKNNGDDWMY-PKPLMDLSGWNLRCMDSGNMHHFVG-ADSSCISWGH 356
G L+ WG +L N + P +++ G + +G H G +D + +WG+
Sbjct: 644 GTLWAWGANSVGQLGNGVTTATFTPVQVINAEGVPYVSLAAGTSHSLAGRSDGTLWAWGN 703
Query: 357 AQYGELGYGPY 367
G+LG GP+
Sbjct: 704 NTSGQLGTGPH 714
Score = 165 (63.1 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 66/242 (27%), Positives = 104/242 (42%)
Query: 27 STCWDAVGRRKGALDGNLVSPTRLRPLVGVD-IRFVAAGCVSCHCVAVDVEGRCYTWGRN 85
+T W G K L + T P G + VAAG H + + +G + G N
Sbjct: 4 TTLWG--GWFKALLAAAFILATLGAPAAGWSAVPHVAAG--GNHVLTLRSDGTLWAAGSN 59
Query: 86 ERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG 145
+ GQLG G I R P V K AG +H++ + DG+ A+G N GQLG
Sbjct: 60 QFGQLGDGTGINRTSPVQVPGTWK----TVAAGTTHSLGIKADGSLWAWGSNLFGQLGQP 115
Query: 146 SIRNEIEP---SPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNE 202
+ ++ SP+R + T + +G ++ + G +G+LG GT
Sbjct: 116 LVNGQLATNKFSPIRIGTGNDWVAVSAGELTSFGLKGDG-TLWSWGNNLFGELGDGT--- 171
Query: 203 YNTKDSSVKLAYEAQPRPRAIAA--LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGR 260
+V ++P+P + A L+ V VA G H +A+ + G ++ WG G+
Sbjct: 172 ------TV-----SRPQPVQVVADPLSNGRYVAVAAGGEHALALQADGTLWAWGANLTGQ 220
Query: 261 LG 262
LG
Sbjct: 221 LG 222
Score = 162 (62.1 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 66/258 (25%), Positives = 99/258 (38%)
Query: 54 VGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIK 113
VG +VA + H VA+ G WG N +G +G G R PT++ +
Sbjct: 290 VGTGSDWVAIAAGALHTVALHRNGTVSAWGNNAQGAVGDGTVANRSTPTLIVAPVTL-VN 348
Query: 114 KAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFT 173
V + N FGW G G+G + N + V+ T + GA +
Sbjct: 349 NVAIAAGTGVSFSVLANGTVFGW---GGNGAGQLGNGTFGA-----VTAPTVLSAGA--S 398
Query: 174 VWLSSVEGASILNAGLPQYGQL-GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIV 232
WL VE + GL G L G + D + + A P P + AG
Sbjct: 399 AWLG-VEPGGAFSLGLRSNGTLWAWGGNASGQLGDGTTTPS--AIPVP--VVGGAGNWRT 453
Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISA 292
A GT H+VAV + G ++ WG G+LG P+++ V + ++
Sbjct: 454 -TATGTAHSVAVRADGTLWAWGDNSSGQLGIGSTVAASTPQQITVTNPASAGNDWTAVAG 512
Query: 293 GSVNSSCTAGGGQLYMWG 310
G +S G L+ WG
Sbjct: 513 GGAHSLGLKADGTLWSWG 530
Score = 160 (61.4 bits), Expect = 5.8e-10, Sum P(2) = 5.8e-10
Identities = 75/281 (26%), Positives = 120/281 (42%)
Query: 37 KGAL-DG---NLVSPTRL-RPLVGVDIRFVAAGC-VSCHCVAVDVEGRCYTWGRNERGQL 90
+GA+ DG N +PT + P+ V+ +AAG VS +A G + WG N GQL
Sbjct: 323 QGAVGDGTVANRSTPTLIVAPVTLVNNVAIAAGTGVSFSVLA---NGTVFGWGGNGAGQL 379
Query: 91 GHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNE 150
G+G PT++S + + G + ++ + +G A+G N GQLG G+
Sbjct: 380 GNGTFGAVTAPTVLSAGASAWLGVEPGG-AFSLGLRSNGTLWAWGGNASGQLGDGTTTPS 438
Query: 151 IEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSV 210
P PV TA G +V + + +G ++ G GQLG G+ +T
Sbjct: 439 AIPVPVVGGAGNWRTTATGTAHSVAVRA-DG-TLWAWGDNSSGQLGIGSTVAASTPQQIT 496
Query: 211 KLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHRE-QKDE 269
P A AG VA G H++ + + G +++WG +G+LG +
Sbjct: 497 V----TNP------ASAGNDWTAVAGGGAHSLGLKADGTLWSWGDNTFGQLGDGTGTSNR 546
Query: 270 WVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
P ++ N ++AG V S G ++ WG
Sbjct: 547 TTPVQIVTGNPGNFDRNWVAVAAGGVFSLALQADGTIWTWG 587
Score = 135 (52.6 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 46/165 (27%), Positives = 65/165 (39%)
Query: 52 PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
P + +VA H +++ +G + WG N GQLG+G P V
Sbjct: 619 PSTAFNSSWVAIAAGQDHGLSLQADGTLWAWGANSVGQLGNGVTTATFTPVQVINAEGVP 678
Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS-------PVRCLVSEVT 164
AG SH++ DG A+G N GQLG+G + +P P R L S
Sbjct: 679 YVSLAAGTSHSLAGRSDGTLWAWGNNTSGQLGTGPHPGDADPLNPQPHTVPARILTSNPV 738
Query: 165 ATA-------CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNE 202
+ A G + L S ++ G GQLG+GT E
Sbjct: 739 SAADDWLVATAGGSHSAALKS--NGTLWTWGQNTSGQLGNGTTTE 781
Score = 134 (52.2 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 69/274 (25%), Positives = 108/274 (39%)
Query: 55 GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ-RDRPT-IVS----ELS 108
G D VA G H + + +G ++WG N GQLG G R P IV+
Sbjct: 504 GNDWTAVAGG--GAHSLGLKADGTLWSWGDNTFGQLGDGTGTSNRTTPVQIVTGNPGNFD 561
Query: 109 KYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT-ATA 167
+ + A AG ++ + DG +G N QLG+ + P+ R + +++ A+
Sbjct: 562 RNWVAVA-AGGVFSLALQADGTIWTWGDNSLLQLGTDPAM--LTPATQRNVPAQLAVASP 618
Query: 168 CGADF-TVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
F + W++ G L G L N + V A P +
Sbjct: 619 PSTAFNSSWVAIAAGQDH-GLSLQADGTLWAWGANSVGQLGNGVTTATFT---PVQVINA 674
Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG---HREQKD------EWVPRRVDV 277
G V +A GT+H++A S G ++ WG G+LG H D VP R+
Sbjct: 675 EGVPYVSLAAGTSHSLAGRSDGTLWAWGNNTSGQLGTGPHPGDADPLNPQPHTVPARILT 734
Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
+ V +AG +S+ G L+ WG+
Sbjct: 735 SNPVSAADDWLVATAGGSHSAALKSNGTLWTWGQ 768
Score = 132 (51.5 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 64/228 (28%), Positives = 102/228 (44%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI-----QRDRPTIVSELSKYKIK-- 113
VAAG V +A+ +G +TWG N QLG + QR+ P ++ S
Sbjct: 567 VAAGGV--FSLALQADGTIWTWGDNSLLQLGTDPAMLTPATQRNVPAQLAVASPPSTAFN 624
Query: 114 ----KAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATAC 168
AG+ H + + DG A+G N GQLG+G +PV+ + +E V +
Sbjct: 625 SSWVAIAAGQDHGLSLQADGTLWAWGANSVGQLGNGVTTATF--TPVQVINAEGVPYVSL 682
Query: 169 GADFTVWLSSVEGASILNAGLPQYGQLG---H-GTDNEYNTKDSSVKLAYEAQPRPRAIA 224
A + L+ ++ G GQLG H G + N + +V A P ++
Sbjct: 683 AAGTSHSLAGRSDGTLWAWGNNTSGQLGTGPHPGDADPLNPQPHTVP-ARILTSNP--VS 739
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
A A + +V A G +H+ A+ S G ++TWG G+LG+ + +P
Sbjct: 740 A-ADDWLVATA-GGSHSAALKSNGTLWTWGQNTSGQLGNGTTTEADIP 785
Score = 132 (51.5 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 73/294 (24%), Positives = 121/294 (41%)
Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGAD 171
+ AG +H + + DG A G N+ GQLG G+ N SPV+ + T A G
Sbjct: 34 VPHVAAGGNHVLTLRSDGTLWAAGSNQFGQLGDGTGINRT--SPVQVPGTWKTVAA-GTT 90
Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
++ + + +G S+ G +GQLG N + ++ K + P I G
Sbjct: 91 HSLGIKA-DG-SLWAWGSNLFGQLGQPL---VNGQLATNKFS------PIRIGT--GNDW 137
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN---VLPPEA 288
V V+ G + + G +++WG +G LG P +V +N V
Sbjct: 138 VAVSAGELTSFGLKGDGTLWSWGNNLFGELGDGTTVSRPQPVQVVADPLSNGRYVAVAAG 197
Query: 289 VISAGSVNSSCTAGGGQLYMWGKLKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHF-VG 346
A ++ + T + G+L G + P PL + + + +G MH +
Sbjct: 198 GEHALALQADGTLWAWGANLTGQLGTGGTGILPNPTPLKIGTDRDWTAISAGEMHSVALK 257
Query: 347 ADSSCISWGHAQYGELGYG-PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
AD S SWG +GELG G + P +V G +++A G H++ +
Sbjct: 258 ADGSLWSWGQNLFGELGNGVALPGANVTTPTRVGT--GSDWVAIAAGALHTVAL 309
Score = 70 (29.7 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 18/51 (35%), Positives = 27/51 (52%)
Query: 347 ADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
AD + +WG G+LG G ++ P +V EG+ +S+A G HSL
Sbjct: 642 ADGTLWAWGANSVGQLGNGV--TTATFTPVQVINAEGVPYVSLAAGTSHSL 690
Score = 47 (21.6 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 26/115 (22%), Positives = 41/115 (35%)
Query: 228 GETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP-- 285
G I +A G VAV + GY + W PR F N +
Sbjct: 1453 GHNIRGIAYGNGVFVAVGASGYDLDQNASRQAIILTSTNGITWTPRNSGTFLNLNAVTFA 1512
Query: 286 PEAVISAGSVNSSC-TAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSG 339
++ N++ A G L + + NG W + + +G NLR + +G
Sbjct: 1513 NGRFVAVSDYNATGDVADEGALIL---VSTNGITWNTIRKITSTAG-NLRSVIAG 1563
>TIGR_CMR|GSU_1251 [details] [associations]
symbol:GSU_1251 "BNR repeat domain protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
Gene3D:2.60.40.360 InterPro:IPR008962 InterPro:IPR011040
SUPFAM:SSF50939 RefSeq:NP_952304.1 ProteinModelPortal:Q74DR4
GeneID:2688149 KEGG:gsu:GSU1251 PATRIC:22025273
HOGENOM:HOG000144307 OMA:QADGTLW
BioCyc:GSUL243231:GH27-1279-MONOMER Uniprot:Q74DR4
Length = 2082
Score = 220 (82.5 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 106/389 (27%), Positives = 164/389 (42%)
Query: 26 GSTCWDAVGRR--KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWG 83
GS + +G+ G L N SP R+ G D V+AG ++ + D G ++WG
Sbjct: 105 GSNLFGQLGQPLVNGQLATNKFSPIRIG--TGNDWVAVSAGELTSFGLKGD--GTLWSWG 160
Query: 84 RNERGQLGHGDKIQRDRPT-IVSE-LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
N G+LG G + R +P +V++ LS + AG H + + DG A+G N GQ
Sbjct: 161 NNLFGELGDGTTVSRPQPVQVVADPLSNGRYVAVAAGGEHALALQADGTLWAWGANLTGQ 220
Query: 142 LGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTD 200
LG+G P+P++ + TA + G +V L + +G S+ + G +G+LG+G
Sbjct: 221 LGTGGTGILPNPTPLKIGTDRDWTAISAGEMHSVALKA-DG-SLWSWGQNLFGELGNG-- 276
Query: 201 NEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGR 260
V L P + G V +A G HTVA+ G V WG G
Sbjct: 277 ---------VALPGANVTTPTRVGT--GSDWVAIAAGALHTVALHRNGTVSAWGNNAQGA 325
Query: 261 LGHREQKDEWVPRRV--DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKN 314
+G + P + V NNV I+AG+ S G ++ WG
Sbjct: 326 VGDGTVANRSTPTLIVAPVTLVNNV-----AIAAGTGVSFSVLANGTVFGWGGNGAGQLG 380
Query: 315 NGDDWMYPKPLM---DLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKS 371
NG P + S W L G + ++ + +WG G+LG G
Sbjct: 381 NGTFGAVTAPTVLSAGASAW-LGVEPGGAFSLGLRSNGTLWAWGGNASGQLGDGT--TTP 437
Query: 372 SAMPKKVDILEGM-HVISVACGYGHSLVI 399
SA+P V ++ G + + A G HS+ +
Sbjct: 438 SAIP--VPVVGGAGNWRTTATGTAHSVAV 464
Score = 207 (77.9 bits), Expect = 5.2e-13, P = 5.2e-13
Identities = 102/384 (26%), Positives = 158/384 (41%)
Query: 28 TCWDAVGRRKGAL-DGNLVSPTRLRPLVGVDI---RFVAAGCVSCHCVAVDVEGRCYTWG 83
T W G L DG VS + +V + R+VA H +A+ +G + WG
Sbjct: 155 TLWSWGNNLFGELGDGTTVSRPQPVQVVADPLSNGRYVAVAAGGEHALALQADGTLWAWG 214
Query: 84 RNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG 143
N GQLG G PT + + AG H+V + DG+ ++G N G+LG
Sbjct: 215 ANLTGQLGTGGTGILPNPTPLKIGTDRDWTAISAGEMHSVALKADGSLWSWGQNLFGELG 274
Query: 144 SG-SIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDN 201
+G ++ +P R S+ A A GA TV L ++ G G +G GT
Sbjct: 275 NGVALPGANVTTPTRVGTGSDWVAIAAGALHTVALH--RNGTVSAWGNNAQGAVGDGT-- 330
Query: 202 EYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRL 261
+A + P +A + V +A GT + +V + G V+ WG G G+L
Sbjct: 331 ----------VANRSTPT-LIVAPVTLVNNVAIAAGTGVSFSVLANGTVFGWGGNGAGQL 379
Query: 262 GHREQKDEWVPRRVDVFQRNNV-LPPEAVISAG-SVNSSCTAGGGQLYMWGKLKNNGDD- 318
G+ P + + + P S G N + A GG G+L +
Sbjct: 380 GNGTFGAVTAPTVLSAGASAWLGVEPGGAFSLGLRSNGTLWAWGGNAS--GQLGDGTTTP 437
Query: 319 WMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
P P++ +G N R +G H V AD + +WG G+LG G +++ P++
Sbjct: 438 SAIPVPVVGGAG-NWRTTATGTAHSVAVRADGTLWAWGDNSSGQLGIG--STVAASTPQQ 494
Query: 378 VDILE----GMHVISVACGYGHSL 397
+ + G +VA G HSL
Sbjct: 495 ITVTNPASAGNDWTAVAGGGAHSL 518
Score = 180 (68.4 bits), Expect = 5.1e-10, P = 5.1e-10
Identities = 80/311 (25%), Positives = 125/311 (40%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G + WG N GQLG G P +V ++ G +H+V V DG A+G
Sbjct: 417 GTLWAWGGNASGQLGDGTTTPSAIPVPVVGGAGNWRT--TATGTAHSVAVRADGTLWAWG 474
Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLV-----SEVTATACGADFTVWLSSVEGASILNAGLP 190
N GQLG GS P + ++ TA A G ++ L + +G ++ + G
Sbjct: 475 DNSSGQLGIGSTVAASTPQQITVTNPASAGNDWTAVAGGGAHSLGLKA-DG-TLWSWGDN 532
Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
+GQLG GT T + V++ P V VA G ++A+ + G +
Sbjct: 533 TFGQLGDGTGTSNRT--TPVQIV-TGNP------GNFDRNWVAVAAGGVFSLALQADGTI 583
Query: 251 YTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV-------ISAGSVNSSCTAGG 303
+TWG +LG +R Q PP I+AG +
Sbjct: 584 WTWGDNSLLQLGTDPAMLTPATQRNVPAQLAVASPPSTAFNSSWVAIAAGQDHGLSLQAD 643
Query: 304 GQLYMWG-----KLKNNGDDWMY-PKPLMDLSGWNLRCMDSGNMHHFVG-ADSSCISWGH 356
G L+ WG +L N + P +++ G + +G H G +D + +WG+
Sbjct: 644 GTLWAWGANSVGQLGNGVTTATFTPVQVINAEGVPYVSLAAGTSHSLAGRSDGTLWAWGN 703
Query: 357 AQYGELGYGPY 367
G+LG GP+
Sbjct: 704 NTSGQLGTGPH 714
Score = 165 (63.1 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 66/242 (27%), Positives = 104/242 (42%)
Query: 27 STCWDAVGRRKGALDGNLVSPTRLRPLVGVD-IRFVAAGCVSCHCVAVDVEGRCYTWGRN 85
+T W G K L + T P G + VAAG H + + +G + G N
Sbjct: 4 TTLWG--GWFKALLAAAFILATLGAPAAGWSAVPHVAAG--GNHVLTLRSDGTLWAAGSN 59
Query: 86 ERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG 145
+ GQLG G I R P V K AG +H++ + DG+ A+G N GQLG
Sbjct: 60 QFGQLGDGTGINRTSPVQVPGTWK----TVAAGTTHSLGIKADGSLWAWGSNLFGQLGQP 115
Query: 146 SIRNEIEP---SPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNE 202
+ ++ SP+R + T + +G ++ + G +G+LG GT
Sbjct: 116 LVNGQLATNKFSPIRIGTGNDWVAVSAGELTSFGLKGDG-TLWSWGNNLFGELGDGT--- 171
Query: 203 YNTKDSSVKLAYEAQPRPRAIAA--LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGR 260
+V ++P+P + A L+ V VA G H +A+ + G ++ WG G+
Sbjct: 172 ------TV-----SRPQPVQVVADPLSNGRYVAVAAGGEHALALQADGTLWAWGANLTGQ 220
Query: 261 LG 262
LG
Sbjct: 221 LG 222
Score = 162 (62.1 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 66/258 (25%), Positives = 99/258 (38%)
Query: 54 VGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIK 113
VG +VA + H VA+ G WG N +G +G G R PT++ +
Sbjct: 290 VGTGSDWVAIAAGALHTVALHRNGTVSAWGNNAQGAVGDGTVANRSTPTLIVAPVTL-VN 348
Query: 114 KAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFT 173
V + N FGW G G+G + N + V+ T + GA +
Sbjct: 349 NVAIAAGTGVSFSVLANGTVFGW---GGNGAGQLGNGTFGA-----VTAPTVLSAGA--S 398
Query: 174 VWLSSVEGASILNAGLPQYGQL-GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIV 232
WL VE + GL G L G + D + + A P P + AG
Sbjct: 399 AWLG-VEPGGAFSLGLRSNGTLWAWGGNASGQLGDGTTTPS--AIPVP--VVGGAGNWRT 453
Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISA 292
A GT H+VAV + G ++ WG G+LG P+++ V + ++
Sbjct: 454 -TATGTAHSVAVRADGTLWAWGDNSSGQLGIGSTVAASTPQQITVTNPASAGNDWTAVAG 512
Query: 293 GSVNSSCTAGGGQLYMWG 310
G +S G L+ WG
Sbjct: 513 GGAHSLGLKADGTLWSWG 530
Score = 160 (61.4 bits), Expect = 5.8e-10, Sum P(2) = 5.8e-10
Identities = 75/281 (26%), Positives = 120/281 (42%)
Query: 37 KGAL-DG---NLVSPTRL-RPLVGVDIRFVAAGC-VSCHCVAVDVEGRCYTWGRNERGQL 90
+GA+ DG N +PT + P+ V+ +AAG VS +A G + WG N GQL
Sbjct: 323 QGAVGDGTVANRSTPTLIVAPVTLVNNVAIAAGTGVSFSVLA---NGTVFGWGGNGAGQL 379
Query: 91 GHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNE 150
G+G PT++S + + G + ++ + +G A+G N GQLG G+
Sbjct: 380 GNGTFGAVTAPTVLSAGASAWLGVEPGG-AFSLGLRSNGTLWAWGGNASGQLGDGTTTPS 438
Query: 151 IEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSV 210
P PV TA G +V + + +G ++ G GQLG G+ +T
Sbjct: 439 AIPVPVVGGAGNWRTTATGTAHSVAVRA-DG-TLWAWGDNSSGQLGIGSTVAASTPQQIT 496
Query: 211 KLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHRE-QKDE 269
P A AG VA G H++ + + G +++WG +G+LG +
Sbjct: 497 V----TNP------ASAGNDWTAVAGGGAHSLGLKADGTLWSWGDNTFGQLGDGTGTSNR 546
Query: 270 WVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
P ++ N ++AG V S G ++ WG
Sbjct: 547 TTPVQIVTGNPGNFDRNWVAVAAGGVFSLALQADGTIWTWG 587
Score = 135 (52.6 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 46/165 (27%), Positives = 65/165 (39%)
Query: 52 PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
P + +VA H +++ +G + WG N GQLG+G P V
Sbjct: 619 PSTAFNSSWVAIAAGQDHGLSLQADGTLWAWGANSVGQLGNGVTTATFTPVQVINAEGVP 678
Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS-------PVRCLVSEVT 164
AG SH++ DG A+G N GQLG+G + +P P R L S
Sbjct: 679 YVSLAAGTSHSLAGRSDGTLWAWGNNTSGQLGTGPHPGDADPLNPQPHTVPARILTSNPV 738
Query: 165 ATA-------CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNE 202
+ A G + L S ++ G GQLG+GT E
Sbjct: 739 SAADDWLVATAGGSHSAALKS--NGTLWTWGQNTSGQLGNGTTTE 781
Score = 134 (52.2 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 69/274 (25%), Positives = 108/274 (39%)
Query: 55 GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ-RDRPT-IVS----ELS 108
G D VA G H + + +G ++WG N GQLG G R P IV+
Sbjct: 504 GNDWTAVAGG--GAHSLGLKADGTLWSWGDNTFGQLGDGTGTSNRTTPVQIVTGNPGNFD 561
Query: 109 KYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT-ATA 167
+ + A AG ++ + DG +G N QLG+ + P+ R + +++ A+
Sbjct: 562 RNWVAVA-AGGVFSLALQADGTIWTWGDNSLLQLGTDPAM--LTPATQRNVPAQLAVASP 618
Query: 168 CGADF-TVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
F + W++ G L G L N + V A P +
Sbjct: 619 PSTAFNSSWVAIAAGQDH-GLSLQADGTLWAWGANSVGQLGNGVTTATFT---PVQVINA 674
Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG---HREQKD------EWVPRRVDV 277
G V +A GT+H++A S G ++ WG G+LG H D VP R+
Sbjct: 675 EGVPYVSLAAGTSHSLAGRSDGTLWAWGNNTSGQLGTGPHPGDADPLNPQPHTVPARILT 734
Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
+ V +AG +S+ G L+ WG+
Sbjct: 735 SNPVSAADDWLVATAGGSHSAALKSNGTLWTWGQ 768
Score = 132 (51.5 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 64/228 (28%), Positives = 102/228 (44%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI-----QRDRPTIVSELSKYKIK-- 113
VAAG V +A+ +G +TWG N QLG + QR+ P ++ S
Sbjct: 567 VAAGGV--FSLALQADGTIWTWGDNSLLQLGTDPAMLTPATQRNVPAQLAVASPPSTAFN 624
Query: 114 ----KAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATAC 168
AG+ H + + DG A+G N GQLG+G +PV+ + +E V +
Sbjct: 625 SSWVAIAAGQDHGLSLQADGTLWAWGANSVGQLGNGVTTATF--TPVQVINAEGVPYVSL 682
Query: 169 GADFTVWLSSVEGASILNAGLPQYGQLG---H-GTDNEYNTKDSSVKLAYEAQPRPRAIA 224
A + L+ ++ G GQLG H G + N + +V A P ++
Sbjct: 683 AAGTSHSLAGRSDGTLWAWGNNTSGQLGTGPHPGDADPLNPQPHTVP-ARILTSNP--VS 739
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
A A + +V A G +H+ A+ S G ++TWG G+LG+ + +P
Sbjct: 740 A-ADDWLVATA-GGSHSAALKSNGTLWTWGQNTSGQLGNGTTTEADIP 785
Score = 132 (51.5 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 73/294 (24%), Positives = 121/294 (41%)
Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGAD 171
+ AG +H + + DG A G N+ GQLG G+ N SPV+ + T A G
Sbjct: 34 VPHVAAGGNHVLTLRSDGTLWAAGSNQFGQLGDGTGINRT--SPVQVPGTWKTVAA-GTT 90
Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
++ + + +G S+ G +GQLG N + ++ K + P I G
Sbjct: 91 HSLGIKA-DG-SLWAWGSNLFGQLGQPL---VNGQLATNKFS------PIRIGT--GNDW 137
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN---VLPPEA 288
V V+ G + + G +++WG +G LG P +V +N V
Sbjct: 138 VAVSAGELTSFGLKGDGTLWSWGNNLFGELGDGTTVSRPQPVQVVADPLSNGRYVAVAAG 197
Query: 289 VISAGSVNSSCTAGGGQLYMWGKLKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHF-VG 346
A ++ + T + G+L G + P PL + + + +G MH +
Sbjct: 198 GEHALALQADGTLWAWGANLTGQLGTGGTGILPNPTPLKIGTDRDWTAISAGEMHSVALK 257
Query: 347 ADSSCISWGHAQYGELGYG-PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
AD S SWG +GELG G + P +V G +++A G H++ +
Sbjct: 258 ADGSLWSWGQNLFGELGNGVALPGANVTTPTRVGT--GSDWVAIAAGALHTVAL 309
Score = 70 (29.7 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 18/51 (35%), Positives = 27/51 (52%)
Query: 347 ADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
AD + +WG G+LG G ++ P +V EG+ +S+A G HSL
Sbjct: 642 ADGTLWAWGANSVGQLGNGV--TTATFTPVQVINAEGVPYVSLAAGTSHSL 690
Score = 47 (21.6 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 26/115 (22%), Positives = 41/115 (35%)
Query: 228 GETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP-- 285
G I +A G VAV + GY + W PR F N +
Sbjct: 1453 GHNIRGIAYGNGVFVAVGASGYDLDQNASRQAIILTSTNGITWTPRNSGTFLNLNAVTFA 1512
Query: 286 PEAVISAGSVNSSC-TAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSG 339
++ N++ A G L + + NG W + + +G NLR + +G
Sbjct: 1513 NGRFVAVSDYNATGDVADEGALIL---VSTNGITWNTIRKITSTAG-NLRSVIAG 1563
>UNIPROTKB|A7Z018 [details] [associations]
symbol:RCC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0000794 "condensed nuclear chromosome" evidence=IEA]
[GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=IEA] [GO:0051225
"spindle assembly" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031492 "nucleosomal DNA binding" evidence=IEA] [GO:0007090
"regulation of S phase of mitotic cell cycle" evidence=IEA]
[GO:0007088 "regulation of mitosis" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0007052 "mitotic spindle
organization" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0007088 GO:GO:0007059 GO:GO:0007052
GO:GO:0051225 GO:GO:0000082 GO:GO:0031965 GO:GO:0000790
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0000794
GO:GO:0005087 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 GO:GO:0007090 GO:GO:0031492
GeneTree:ENSGT00700000104160 KO:K11493 CTD:1104
HOGENOM:HOG000234341 HOVERGEN:HBG017712 OrthoDB:EOG4320Z9
EMBL:DAAA02006335 EMBL:BC153215 IPI:IPI00868581
RefSeq:NP_001098878.1 UniGene:Bt.54942 SMR:A7Z018 STRING:A7Z018
Ensembl:ENSBTAT00000032060 GeneID:534142 KEGG:bta:534142
InParanoid:A7Z018 OMA:GTESCFV NextBio:20876286 Uniprot:A7Z018
Length = 422
Score = 209 (78.6 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 91/369 (24%), Positives = 157/369 (42%)
Query: 49 RLRP-LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR--PTIVS 105
R +P LV + V A H V + G+ Y++G N+ G LG ++ P V
Sbjct: 57 RKKPALVSIPEDIVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKV- 115
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW--NKHGQLGS-GSIRNEIEPSPVRCLVSE 162
+L + K+ + AG SHT +TEDG +G + +G +G ++ + P V+ V
Sbjct: 116 DLQE-KVIQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLSVP- 173
Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
V A G D V L+ V+G + G + GQLG + + L P+
Sbjct: 174 VVKVASGNDHLVMLT-VDG-DLYTLGSGEQGQLGR-VPELFANRGGRQGLERLLVPKCVM 230
Query: 223 IAALAGETIVKVA---CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
+ + V+ CG T A+ S+G+VY +G Y +LG + + +VP+ + F+
Sbjct: 231 LKSRGSRGHVRFQDAFCGAYFTFAISSEGHVYGFGLSNYHQLGTQGTESCFVPQNLTSFK 290
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL-SGW 331
N S G ++ C G+ Y G+ L ++ P + L +
Sbjct: 291 --NSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSVPTLIPRLPTVS 348
Query: 332 NLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVAC 391
++ C ++ + V D +WG +LG G S + LE V++V+
Sbjct: 349 SVAC--GASVGYAVTKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLTVSS 406
Query: 392 GYGHSLVIV 400
G H++++V
Sbjct: 407 GGQHTVLLV 415
Score = 139 (54.0 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 56/189 (29%), Positives = 85/189 (44%)
Query: 77 GRCYTWGRNERGQLGHGDKI-QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G T G+ + GQLG G+ + +R +P +VS I +A AG HTV +++ G +FG
Sbjct: 35 GVVLTLGQGDVGQLGLGENVMERKKPALVS--IPEDIVQAEAGGMHTVCLSKSGQVYSFG 92
Query: 136 WNKHGQLGSG-SIR-NEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
N G LG S+ +E+ P V L +V + G T L+ +G L +G
Sbjct: 93 CNDEGALGRDTSVEGSEMVPGKVD-LQEKVIQVSAGDSHTAALTE-DGRVFL------WG 144
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
DN + + L + + +VKVA G +H V + G +YT
Sbjct: 145 SF---RDN-----NGVIGLLEPMKKSMVPVQVQLSVPVVKVASGNDHLVMLTVDGDLYTL 196
Query: 254 GFGGYGRLG 262
G G G+LG
Sbjct: 197 GSGEQGQLG 205
>UNIPROTKB|E1BRZ2 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0072372
"primary cilium" evidence=IEA] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372 PRINTS:PR00633
PROSITE:PS50012 GeneTree:ENSGT00700000104137 OMA:EREVFAW
EMBL:AADN02025864 IPI:IPI00574044 ProteinModelPortal:E1BRZ2
Ensembl:ENSGALT00000006340 Uniprot:E1BRZ2
Length = 689
Score = 213 (80.0 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 76/262 (29%), Positives = 119/262 (45%)
Query: 55 GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK 114
GV I+ V+ G + C+ D G T+G G LGHG+ +P IV L Y++ +
Sbjct: 396 GVTIKHVSCGDLFTACLT-D-RGIIMTFGSGSNGCLGHGNFTDVSQPKIVEALLGYEMVQ 453
Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS---EVTATACGAD 171
G SH + V+ + A+G +G+LG G++ E SP + V E CG D
Sbjct: 454 VACGASHVLAVSNEREVFAWGRGDNGRLGLGTL--ECHNSPQQVAVPPEHEAQRVICGID 511
Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVK-LAYEAQPRPRAIAA-LAGE 229
++ L+ V IL G + +LG D + ++ S + EA A +A L E
Sbjct: 512 SSMVLT-VNN-QILACGSNRCNKLG--LDRISSAEEPSPEDQVEEATVFTCAQSAPLNQE 567
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
+V GT H+ AV + G YT+G +G+LG ++ VP V + V V
Sbjct: 568 PVVCADIGTAHSAAVTASGQCYTFGSNQHGQLGTNSCRNSRVPHLVVGLRAMKV----TV 623
Query: 290 ISAGSVNSSCTAGGGQLYMWGK 311
++ G + G++ WGK
Sbjct: 624 VACGDAFTVAIGADGEVCTWGK 645
Score = 210 (79.0 bits), Expect = 5.4e-14, P = 5.4e-14
Identities = 66/234 (28%), Positives = 106/234 (45%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L+G ++ V C + H +AV E + WGR + G+LG G + P V+
Sbjct: 440 PKIVEALLGYEM--VQVACGASHVLAVSNEREVFAWGRGDNGRLGLGTLECHNSPQQVAV 497
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT 166
+++ ++ G ++V+T + LA G N+ +LG I + EPSP V E T
Sbjct: 498 PPEHEAQRVICGIDSSMVLTVNNQILACGSNRCNKLGLDRISSAEEPSP-EDQVEEATVF 556
Query: 167 ACGADFTVWLSSVEGASI---LNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
C + V A I +A + GQ N++ ++ + P +
Sbjct: 557 TCAQSAPLNQEPVVCADIGTAHSAAVTASGQCYTFGSNQHGQLGTN---SCRNSRVPHLV 613
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
L + VACG TVA+ + G V TWG G GRLG R+ ++ +PR V +
Sbjct: 614 VGLRAMKVTVVACGDAFTVAIGADGEVCTWGKGARGRLG-RKDEETGMPRPVQL 666
Score = 170 (64.9 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 84/314 (26%), Positives = 134/314 (42%)
Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI---RNEIEPSPV-RCLVSEVTAT 166
++ + AGR+ VT+ G + + G G S+ +++P V R L + T
Sbjct: 339 EVVQVSAGRTQKAGVTKSGRLIMWEAPPMGTAGGPSLPGATEQLQPQFVSRFLEGQSGVT 398
Query: 167 ----ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
+CG FT L+ G I+ G G LGHG N D S +P+
Sbjct: 399 IKHVSCGDLFTACLTD-RGI-IMTFGSGSNGCLGHG-----NFTDVS---------QPKI 442
Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
+ AL G +V+VACG +H +AV ++ V+ WG G GRLG + P++V V +
Sbjct: 443 VEALLGYEMVQVACGASHVLAVSNEREVFAWGRGDNGRLGLGTLECHNSPQQVAVPPEHE 502
Query: 283 VLPPEAVISAG---SVNSSCTA-GGGQLYMWGKLKNNGDDWMYPKPLMD----------- 327
I + +VN+ A G + G + + + P+ ++
Sbjct: 503 AQRVICGIDSSMVLTVNNQILACGSNRCNKLGLDRISSAEEPSPEDQVEEATVFTCAQSA 562
Query: 328 -LSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMH 385
L+ + C D G H V A C ++G Q+G+LG ++S +P V L M
Sbjct: 563 PLNQEPVVCADIGTAHSAAVTASGQCYTFGSNQHGQLGTNSC--RNSRVPHLVVGLRAMK 620
Query: 386 VISVACGYGHSLVI 399
V VACG ++ I
Sbjct: 621 VTVVACGDAFTVAI 634
Score = 129 (50.5 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 35/111 (31%), Positives = 49/111 (44%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
V A + H AV G+CYT+G N+ GQLG P +V L K+ G +
Sbjct: 570 VCADIGTAHSAAVTASGQCYTFGSNQHGQLGTNSCRNSRVPHLVVGLRAMKVTVVACGDA 629
Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE---VTATAC 168
TV + DG +G G+LG + P PV+ + VT+ AC
Sbjct: 630 FTVAIGADGEVCTWGKGARGRLGRKDEETGM-PRPVQLEETHPYVVTSVAC 679
>RGD|1592835 [details] [associations]
symbol:Rcc1 "regulator of chromosome condensation 1"
species:10116 "Rattus norvegicus" [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0000794 "condensed nuclear chromosome"
evidence=ISO] [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0005087 "Ran guanyl-nucleotide exchange factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0007052 "mitotic spindle
organization" evidence=ISO] [GO:0007059 "chromosome segregation"
evidence=ISO] [GO:0007088 "regulation of mitosis" evidence=ISO]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=ISO] [GO:0031492 "nucleosomal DNA binding" evidence=ISO]
[GO:0031965 "nuclear membrane" evidence=ISO] [GO:0042393 "histone
binding" evidence=ISO] [GO:0050790 "regulation of catalytic
activity" evidence=ISO] [GO:0051225 "spindle assembly"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] RGD:1592835
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 EMBL:CH473968 KO:K11493 CTD:1104
HOVERGEN:HBG017712 EMBL:BC160834 IPI:IPI00896784
RefSeq:NP_001121661.1 UniGene:Rn.217123 SMR:B1H227 GeneID:682908
KEGG:rno:682908 NextBio:724000 Genevestigator:B1H227 Uniprot:B1H227
Length = 421
Score = 208 (78.3 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 94/373 (25%), Positives = 160/373 (42%)
Query: 50 LRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR--PTIVSEL 107
L PL+ D+ AG H V + G+ Y++G N+ G LG ++ P V EL
Sbjct: 62 LVPLLQ-DVVQAEAG--GMHTVCLSQSGQVYSFGCNDEGALGRDTSVEGSEMVPGKV-EL 117
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGW--NKHGQLGS-GSIRNEIEPSPVRCLVSEVT 164
+ K+ + AG SHT +TEDG +G + +G +G ++ + P V+ L ++V
Sbjct: 118 QE-KVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQ-LDTQVV 175
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
A G D V L++ +G + G + GQLG + N + E PR +
Sbjct: 176 KVASGNDHLVMLTT-DG-DLYTLGCGEQGQLGRVPELFANRGG---RQGLERLLVPRCVL 230
Query: 225 ALAGETIVKVA-----CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
+ T +V CG T A+ +G+VY +G Y +LG ++P+ + F+
Sbjct: 231 LKSRGTRGRVRFQDAFCGAYFTFAISREGHVYGFGLSNYHQLGTPGTGSCFIPQNLTSFK 290
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLSGWN 332
N S G ++ C G+ Y G+ L ++ P + L +
Sbjct: 291 --NSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPVVS 348
Query: 333 -LRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVAC 391
+ C ++ + V D +WG +LG G S + LE V++V+
Sbjct: 349 SVAC--GASVGYAVSKDGRVFAWGMGTNYQLGTGQEDDAWSPVEMTGKQLENREVLTVSS 406
Query: 392 GYGHSLVIV-DRT 403
G H++++V D+T
Sbjct: 407 GGQHTVLLVKDKT 419
Score = 147 (56.8 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 55/189 (29%), Positives = 86/189 (45%)
Query: 77 GRCYTWGRNERGQLGHGDKI-QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G T G+ + GQLG G+ + +R +P +V L + +A AG HTV +++ G +FG
Sbjct: 35 GLVLTLGQGDVGQLGLGESVLERKKPALVPLLQD--VVQAEAGGMHTVCLSQSGQVYSFG 92
Query: 136 WNKHGQLGSG-SIR-NEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
N G LG S+ +E+ P V L +V + G T L+ +G L +G
Sbjct: 93 CNDEGALGRDTSVEGSEMVPGKVE-LQEKVVQVSAGDSHTAALTE-DGRVFL------WG 144
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
DN + + L + + +VKVA G +H V + + G +YT
Sbjct: 145 SF---RDN-----NGVIGLLEPMKKSMVPVQVQLDTQVVKVASGNDHLVMLTTDGDLYTL 196
Query: 254 GFGGYGRLG 262
G G G+LG
Sbjct: 197 GCGEQGQLG 205
>SGD|S000003065 [details] [associations]
symbol:SRM1 "Nucleotide exchange factor for Gsp1p"
species:4932 "Saccharomyces cerevisiae" [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0007067 "mitosis" evidence=IEA] [GO:0019236
"response to pheromone" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0004871 "signal transducer activity" evidence=IMP] [GO:0006810
"transport" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=ISM] [GO:0000054
"ribosomal subunit export from nucleus" evidence=IMP] [GO:0006407
"rRNA export from nucleus" evidence=IMP] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
SGD:S000003065 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016021
GO:GO:0051301 GO:GO:0007067 EMBL:BK006941 GO:GO:0000790
GO:GO:0004871 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 GO:GO:0019236 GO:GO:0000054
GeneTree:ENSGT00700000104160 GO:GO:0006407 OMA:PFEAIWA
HOGENOM:HOG000170207 OrthoDB:EOG466ZVF EMBL:M27013 EMBL:Z72619
PIR:A32320 RefSeq:NP_011418.1 PDB:3OF7 PDBsum:3OF7
ProteinModelPortal:P21827 SMR:P21827 DIP:DIP-2315N IntAct:P21827
MINT:MINT-561451 STRING:P21827 PaxDb:P21827 PeptideAtlas:P21827
EnsemblFungi:YGL097W GeneID:852782 KEGG:sce:YGL097W CYGD:YGL097w
EvolutionaryTrace:P21827 NextBio:972265 Genevestigator:P21827
GermOnline:YGL097W Uniprot:P21827
Length = 482
Score = 181 (68.8 bits), Expect = 4.8e-14, Sum P(2) = 4.8e-14
Identities = 68/249 (27%), Positives = 110/249 (44%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE--LSKYKIKKAGAGRSHTVVVT 126
H + +D EG + WG ++ QLG ++R R + +K +G +H +T
Sbjct: 232 HILFLDEEGMVFAWGNGQQNQLGR-KVMERFRLKTLDPRPFGLRHVKYIASGENHCFALT 290
Query: 127 EDGNSLAFGWNKHGQLG-SGSIRN-EIEPSPVRCLVSE---VTATACGADFTVWLSSVEG 181
+D +++G N+ GQ G S + + + P R + + + + A G ++ LS +G
Sbjct: 291 KDNKLVSWGLNQFGQCGVSEDVEDGALVTKPKRLALPDNVVIRSIAAGEHHSLILSQ-DG 349
Query: 182 ASILNAGLPQYGQLGHGTDN--EYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
+ + G ++G DN EY KD K A P P + + VA G++
Sbjct: 350 -DLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKA--RAVPLPTKLNNVP--KFKSVAAGSH 404
Query: 240 HTVAVDSKGYVYTWGFGG-YG-RLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNS 297
H+VAV G Y+WGFG Y LG E E VP R+ +N +I G
Sbjct: 405 HSVAVAQNGIAYSWGFGETYAVGLGPFEDDTE-VPTRI----KNTATQDHNIILVGCGGQ 459
Query: 298 SCTAGGGQL 306
+GG +L
Sbjct: 460 FSVSGGVKL 468
Score = 157 (60.3 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 69/269 (25%), Positives = 116/269 (43%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWG--RNERGQLG-HGDKIQRDR-PTIVSELSKYKIK 113
++ A +SC A+ G Y WG R G LG + DKI+ + P V SKY I
Sbjct: 168 VQLAATDNMSC---ALFSNGEVYAWGTFRCNEGILGFYQDKIKIQKTPWKVPTFSKYNIV 224
Query: 114 KAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN----EIEPSPVRCLVSEVTATACG 169
+ G+ H + + E+G A+G + QLG + ++P P + V A G
Sbjct: 225 QLAPGKDHILFLDEEGMVFAWGNGQQNQLGRKVMERFRLKTLDPRPFG--LRHVKYIASG 282
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
+ L+ + +++ GL Q+GQ G D E D ++ +P+ +A
Sbjct: 283 ENHCFALT--KDNKLVSWGLNQFGQCGVSEDVE----DGALVT------KPKRLALPDNV 330
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG-HREQKDEWV-------PRRVDVFQRN 281
I +A G +H++ + G +Y+ G +G ++ E+ R V + +
Sbjct: 331 VIRSIAAGEHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVPLPTKL 390
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
N +P ++AGS +S A G Y WG
Sbjct: 391 NNVPKFKSVAAGSHHSVAVAQNGIAYSWG 419
Score = 139 (54.0 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 57/215 (26%), Positives = 100/215 (46%)
Query: 200 DNEYNTKDSS-VKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG-FG- 256
D + N +S+ K+ E+ P P A G +V++A N + A+ S G VY WG F
Sbjct: 140 DGDLNELESTPAKIPRESFP-PLA----EGHKVVQLAATDNMSCALFSNGEVYAWGTFRC 194
Query: 257 GYGRLGHREQKD--EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
G LG + K + P +V F + N++ ++ G + G ++ WG +
Sbjct: 195 NEGILGFYQDKIKIQKTPWKVPTFSKYNIVQ----LAPGKDHILFLDEEGMVFAWGNGQQ 250
Query: 315 N--GDDWM--YPKPLMDLSGWNLRCMD---SGNMHHF-VGADSSCISWGHAQYGELGYGP 366
N G M + +D + LR + SG H F + D+ +SWG Q+G+ G
Sbjct: 251 NQLGRKVMERFRLKTLDPRPFGLRHVKYIASGENHCFALTKDNKLVSWGLNQFGQCGVSE 310
Query: 367 YGQKSSAM--PKKVDILEGMHVISVACGYGHSLVI 399
+ + + PK++ + + + + S+A G HSL++
Sbjct: 311 DVEDGALVTKPKRLALPDNVVIRSIAAGEHHSLIL 345
Score = 83 (34.3 bits), Expect = 3.6e-05, Sum P(3) = 3.6e-05
Identities = 49/212 (23%), Positives = 88/212 (41%)
Query: 110 YKIKKAGAGRSHTVVVTEDGNSLAFGWNK--HGQLGSGSIRNEIEPSPVRC-LVSE--VT 164
+K+ + A + + + +G A+G + G LG + +I+ +P + S+ +
Sbjct: 165 HKVVQLAATDNMSCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQKTPWKVPTFSKYNIV 224
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
A G D ++L EG + G Q QLG + K PRP +
Sbjct: 225 QLAPGKDHILFLDE-EGM-VFAWGNGQQNQLGRKVMERFRLKT--------LDPRPFGL- 273
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV----PRRVDVFQR 280
+ +A G NH A+ + +WG +G+ G E ++ P+R+ +
Sbjct: 274 ----RHVKYIASGENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVTKPKRLAL--P 327
Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLYMWGKL 312
+NV+ I+AG +S + G LY G+L
Sbjct: 328 DNVVIRS--IAAGEHHSLILSQDGDLYSCGRL 357
Score = 70 (29.7 bits), Expect = 4.8e-14, Sum P(2) = 4.8e-14
Identities = 22/73 (30%), Positives = 35/73 (47%)
Query: 23 LFC---GSTCWDAVGRRKGALDGNLVSPTRLRPLVGVD-IRFVAAGCVSCHCVAVDVEGR 78
+FC GS C +G A + + P RL P + D + ++ H +A+D E
Sbjct: 48 IFCWGTGSMC--ELGLGPLAKNKEVKRP-RLNPFLPRDEAKIISFAVGGMHTLALDEESN 104
Query: 79 CYTWGRNERGQLG 91
++WG N+ G LG
Sbjct: 105 VWSWGCNDVGALG 117
Score = 59 (25.8 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 15/55 (27%), Positives = 27/55 (49%)
Query: 342 HHFVGADSSCI--SWGHAQYGELGYGPYGQKSSAMPKKVD--ILEGMHVISVACG 392
HH V + I SWG + +G GP+ + + +P ++ + ++I V CG
Sbjct: 404 HHSVAVAQNGIAYSWGFGETYAVGLGPF-EDDTEVPTRIKNTATQDHNIILVGCG 457
>UNIPROTKB|Q8IVU3 [details] [associations]
symbol:HERC6 "Probable E3 ubiquitin-protein ligase HERC6"
species:9606 "Homo sapiens" [GO:0005829 "cytosol" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 HOVERGEN:HBG050878 HSSP:Q9UEP9 EMBL:AF336798
EMBL:AY653201 EMBL:AK000644 EMBL:AK092403 EMBL:AK295832
EMBL:BC035775 EMBL:BC042047 EMBL:AL833664 EMBL:BX647121
IPI:IPI00168048 IPI:IPI00455627 IPI:IPI00554785
RefSeq:NP_001158608.1 RefSeq:NP_060382.3 UniGene:Hs.529317
ProteinModelPortal:Q8IVU3 SMR:Q8IVU3 IntAct:Q8IVU3 STRING:Q8IVU3
PhosphoSite:Q8IVU3 DMDM:74750679 PaxDb:Q8IVU3 PRIDE:Q8IVU3
Ensembl:ENST00000264346 Ensembl:ENST00000273960
Ensembl:ENST00000380265 GeneID:55008 KEGG:hsa:55008 UCSC:uc011cdi.2
UCSC:uc011cdj.2 CTD:55008 GeneCards:GC04P089299 HGNC:HGNC:26072
HPA:HPA035846 MIM:609249 neXtProt:NX_Q8IVU3 PharmGKB:PA134894313
InParanoid:Q8IVU3 OMA:HIFAGTY GenomeRNAi:55008 NextBio:58353
ArrayExpress:Q8IVU3 Bgee:Q8IVU3 Genevestigator:Q8IVU3
Uniprot:Q8IVU3
Length = 1022
Score = 212 (79.7 bits), Expect = 5.8e-14, P = 5.8e-14
Identities = 81/306 (26%), Positives = 140/306 (45%)
Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGS-GSIRNEIEPSPVRCLVSEVT-ATAC 168
++ +A +G H++++ + L+ G N GQLG G+ R E+ P P++ L + + +C
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGEL-PEPIQALETLIVDLVSC 82
Query: 169 GADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAG 228
G + + L+ + G GQLG G E+ K+ S P+ I L
Sbjct: 83 GKEHS--LAVCHKGRVFAWGAGSEGQLGIG---EF--KEISFT--------PKKIMTLND 127
Query: 229 ETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG-HREQKDEWVPRRVDVFQRNNVLPPE 287
I++V+CG H++A+ V++WG +G+LG +E + P+RV + + P
Sbjct: 128 IKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLE--GI--PL 183
Query: 288 AVISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLM--DLSGWNLRCMDS 338
A ++AG +S + G + WG L KPL L + +
Sbjct: 184 AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISC 243
Query: 339 GNMHHFV-GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+ H V D ++G + G+LGY P +K P+ V+ ++G+ V + CG H+L
Sbjct: 244 GDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRG--PQLVERIDGL-VSQIDCGSYHTL 300
Query: 398 VIVDRT 403
V T
Sbjct: 301 AYVHTT 306
Score = 175 (66.7 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 44/132 (33%), Positives = 63/132 (47%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL---GHGDKIQRDRPT 102
SP R+R L G+ + VAAG H A+ + G + WG N GQL G +Q ++P
Sbjct: 171 SPQRVRSLEGIPLAQVAAG--GAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPL 228
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE 162
V L + G +HT V+T+DG FG N+ GQLG + P V +
Sbjct: 229 SVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDGL 288
Query: 163 VTATACGADFTV 174
V+ CG+ T+
Sbjct: 289 VSQIDCGSYHTL 300
Score = 175 (66.7 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 72/316 (22%), Positives = 130/316 (41%)
Query: 55 GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK 114
G ++ A+G H + + R + G N RGQLG + + P + L +
Sbjct: 22 GAELLQAASG--ERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDL 79
Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS---EVTATACGAD 171
G+ H++ V G A+G GQLG G + EI +P + + ++ +CG
Sbjct: 80 VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFK-EISFTPKKIMTLNDIKIIQVSCGHY 138
Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
++ LS + + + + G +GQLG G + + +Q P+ + +L G +
Sbjct: 139 HSLALS--KDSQVFSWGKNSHGQLGLGKE-------------FPSQASPQRVRSLEGIPL 183
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRL---GHREQKDEWVPRRVDVFQRNNVLPPEA 288
+VA G H+ A+ G + WG G+L G P V + V+
Sbjct: 184 AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVV---- 239
Query: 289 VISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKP------LMDLSGWNLRCMDSGNMH 342
IS G +++ G+++ +G +G P P L++ + +D G+ H
Sbjct: 240 YISCGDAHTAVLTQDGKVFTFGD-NRSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYH 298
Query: 343 H--FVGADSSCISWGH 356
+V +S+GH
Sbjct: 299 TLAYVHTTGQVVSFGH 314
Score = 148 (57.2 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 50/188 (26%), Positives = 85/188 (45%)
Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHR-EQKDEWVPRRVDVFQ 279
R A G +++ A G H++ + + V + G G+LG R Q+ E +P + +
Sbjct: 15 RRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGE-LPEPIQALE 73
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GD--DWMY-PKPLMDLSGWN 332
V ++S G +S G+++ WG G+ + + PK +M L+
Sbjct: 74 TLIV----DLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIK 129
Query: 333 LRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVAC 391
+ + G+ H + DS SWG +G+LG G S A P++V LEG+ + VA
Sbjct: 130 IIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFP-SQASPQRVRSLEGIPLAQVAA 188
Query: 392 GYGHSLVI 399
G HS +
Sbjct: 189 GGAHSFAL 196
>UNIPROTKB|F1NXI5 [details] [associations]
symbol:SERGEF "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA] [GO:0050709 "negative regulation of
protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005730 GO:GO:0045111
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
GeneTree:ENSGT00700000104160 PANTHER:PTHR22870:SF7
EMBL:AADN02030419 EMBL:AADN02030421 EMBL:AADN02030420
IPI:IPI00682810 Ensembl:ENSGALT00000010072 OMA:PIELDIT
Uniprot:F1NXI5
Length = 382
Score = 204 (76.9 bits), Expect = 6.5e-14, P = 6.5e-14
Identities = 98/347 (28%), Positives = 142/347 (40%)
Query: 83 GRNERGQLGHGDKIQRDRPTIVSELS-KYK-IKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
G N GQLG G K P ++ ++S K + IK G H+ V+T G G NK G
Sbjct: 1 GANSYGQLGLGHKEDVLVPQLLKDVSCKCQDIKSIAGGGGHSAVITGAGELFVCGHNKAG 60
Query: 141 QLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
QLG + + + L V ACG DFT+ L +L+ G +GQLG
Sbjct: 61 QLGLNHTEDVLCFTLCTALSGFCVQEVACGWDFTIILG--RAGLVLSCGSNAFGQLGV-- 116
Query: 200 DNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYG 259
+ S L P+ I +L E V +A G H +A G V+ WG G
Sbjct: 117 -----PQISGPCLI------PQKIKSLK-EKAVGIAAGLRHALAATESGLVFQWGTGMAS 164
Query: 260 RLGHREQKDE----WVPRRVDVFQRN-NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
R Q W + + N VL + +SA + S TAG G LY+WG K+
Sbjct: 165 RAKRVHQGKTLPVFWAAKEPCEIKGNPGVLLCQVSLSA-YLTSLSTAGEGHLYVWGSNKH 223
Query: 315 ----NGDDWMY-PKPL--MDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
+ + ++ PK + S + + SG H ++ + +WG A YG+LG
Sbjct: 224 GQLVSKEVFLVEPKKIDTQFFSHEKIGAVWSGWTHLVAQTETGKVFTWGRADYGQLGRHA 283
Query: 367 YGQKSSAMPKKVDIL----------EGMHVI---SVACGYGHSLVIV 400
+ + K L G H I +ACG H+L +V
Sbjct: 284 AVYVADRVIKLDSFLPCCPQPEAEKNGNHTILLFQIACGSEHNLAVV 330
Score = 131 (51.2 bits), Expect = 9.8e-11, Sum P(2) = 9.8e-11
Identities = 56/261 (21%), Positives = 111/261 (42%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKK 114
DI+ +A G H + G + G N+ GQLG H + + T+ + LS + +++
Sbjct: 31 DIKSIAGG--GGHSAVITGAGELFVCGHNKAGQLGLNHTEDVLCF--TLCTALSGFCVQE 86
Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNE-IEPSPVRCLVSEVTATACGADFT 173
G T+++ G L+ G N GQLG I + P ++ L + A G
Sbjct: 87 VACGWDFTIILGRAGLVLSCGSNAFGQLGVPQISGPCLIPQKIKSLKEKAVGIAAGLRHA 146
Query: 174 VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
L++ E + Q+G G + + + ++ + + A+ P I G + +
Sbjct: 147 --LAATESGLVF-----QWGT-GMASRAKRVHQGKTLPVFWAAK-EPCEIKGNPGVLLCQ 197
Query: 234 VACGTNHT-VAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV--FQRNNVLPPEAVI 290
V+ T ++ +G++Y WG +G+L +E P+++D F + +
Sbjct: 198 VSLSAYLTSLSTAGEGHLYVWGSNKHGQLVSKEVFLV-EPKKIDTQFFSHEKI----GAV 252
Query: 291 SAGSVNSSCTAGGGQLYMWGK 311
+G + G+++ WG+
Sbjct: 253 WSGWTHLVAQTETGKVFTWGR 273
Score = 131 (51.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 67/271 (24%), Positives = 113/271 (41%)
Query: 22 LLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
+L CGS + +G + + G + P +++ L + +AAG H +A G +
Sbjct: 103 VLSCGSNAFGQLGVPQ--ISGPCLIPQKIKSLKEKAVG-IAAGLR--HALAATESGLVFQ 157
Query: 82 WGRNERGQLGHGDKIQRDRPTIVSELSKYKIK-KAGAGR-----SHTVVVTE-----DGN 130
WG G ++ + + V +K + K G S + +T +G+
Sbjct: 158 WGT---GMASRAKRVHQGKTLPVFWAAKEPCEIKGNPGVLLCQVSLSAYLTSLSTAGEGH 214
Query: 131 SLAFGWNKHGQLGSGSIRNEIEPSPVRC-LVSEVTATACGADFTVWLSSVEGASILNAGL 189
+G NKHGQL S + +EP + S A + +T ++ E + G
Sbjct: 215 LYVWGSNKHGQLVSKEVFL-VEPKKIDTQFFSHEKIGAVWSGWTHLVAQTETGKVFTWGR 273
Query: 190 PQYGQLG-HGTDNEYNTKDSSVKLA--YEAQPRPRAIAALAGETIV--KVACGTNHTVAV 244
YGQLG H Y D +KL P+P A TI+ ++ACG+ H +AV
Sbjct: 274 ADYGQLGRHAA--VY-VADRVIKLDSFLPCCPQPEA-EKNGNHTILLFQIACGSEHNLAV 329
Query: 245 DSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
+ +WG+ +G G + + VP+ V
Sbjct: 330 VGDCCL-SWGWNEHGMCGDGTEANVHVPKPV 359
Score = 118 (46.6 bits), Expect = 0.00036, P = 0.00036
Identities = 38/124 (30%), Positives = 55/124 (44%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLG-HGDKIQRDRPTIVSEL----SKYKIKKAG------- 116
H VA G+ +TWGR + GQLG H DR + + + +K G
Sbjct: 258 HLVAQTETGKVFTWGRADYGQLGRHAAVYVADRVIKLDSFLPCCPQPEAEKNGNHTILLF 317
Query: 117 ---AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADF 172
G H + V D L++GWN+HG G G+ N P PV+ L ++ CGA
Sbjct: 318 QIACGSEHNLAVVGDC-CLSWGWNEHGMCGDGTEANVHVPKPVKALGYAKQILIGCGAGH 376
Query: 173 TVWL 176
++ L
Sbjct: 377 SLAL 380
Score = 98 (39.6 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 51/196 (26%), Positives = 74/196 (37%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSE-LSKYKIKKAG--AGRSHTVVVTEDGNSLA 133
G + G N GQLG Q P ++ + + K K G AG H + TE G L
Sbjct: 101 GLVLSCGSNAFGQLGVP---QISGPCLIPQKIKSLKEKAVGIAAGLRHALAATESG--LV 155
Query: 134 FGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT-------ATACGADFTVWLSSVEGASILN 186
F W G ++ + PV E C + +L+S+ A
Sbjct: 156 FQWGT-GMASRAKRVHQGKTLPVFWAAKEPCEIKGNPGVLLCQVSLSAYLTSLSTAG--E 212
Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDS 246
L +G HG + +K+ + +P+ + E I V G H VA
Sbjct: 213 GHLYVWGSNKHG---QLVSKE-----VFLVEPKKIDTQFFSHEKIGAVWSGWTHLVAQTE 264
Query: 247 KGYVYTWGFGGYGRLG 262
G V+TWG YG+LG
Sbjct: 265 TGKVFTWGRADYGQLG 280
Score = 90 (36.7 bits), Expect = 9.8e-11, Sum P(2) = 9.8e-11
Identities = 20/61 (32%), Positives = 30/61 (49%)
Query: 339 GNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLV 398
G+ H+ C+SWG ++G G G + + +PK V L I + CG GHSL
Sbjct: 322 GSEHNLAVVGDCCLSWGWNEHGMCGDGT--EANVHVPKPVKALGYAKQILIGCGAGHSLA 379
Query: 399 I 399
+
Sbjct: 380 L 380
>UNIPROTKB|P18754 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0007088
"regulation of mitosis" evidence=IDA] [GO:0000082 "G1/S transition
of mitotic cell cycle" evidence=IMP] [GO:0007090 "regulation of S
phase of mitotic cell cycle" evidence=IMP] [GO:0042393 "histone
binding" evidence=IDA] [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000794 "condensed nuclear chromosome" evidence=IDA]
[GO:0007052 "mitotic spindle organization" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0031492 "nucleosomal DNA binding" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007059
"chromosome segregation" evidence=IMP] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0016032 "viral reproduction" evidence=TAS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 Reactome:REACT_116125 GO:GO:0007088 GO:GO:0007059
GO:GO:0005654 GO:GO:0016032 GO:GO:0051301 GO:GO:0007067
GO:GO:0007052 GO:GO:0051225 GO:GO:0000082 GO:GO:0031965
GO:GO:0000790 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0000794 GO:GO:0042393 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GO:GO:0007090 GO:GO:0031492 PDB:1I2M PDBsum:1I2M KO:K11493
EMBL:X12654 EMBL:X06130 EMBL:D00591 EMBL:AF498924 EMBL:BC007300
EMBL:BC010067 EMBL:BC036903 EMBL:BC069198 EMBL:S75708
IPI:IPI00001661 IPI:IPI00747309 PIR:A26691 RefSeq:NP_001041659.1
RefSeq:NP_001041660.1 RefSeq:NP_001041664.1 RefSeq:NP_001260.1
UniGene:Hs.469723 PDB:1A12 PDBsum:1A12 ProteinModelPortal:P18754
SMR:P18754 DIP:DIP-35416N IntAct:P18754 MINT:MINT-240062
STRING:P18754 PhosphoSite:P18754 DMDM:132170 PaxDb:P18754
PRIDE:P18754 DNASU:1104 Ensembl:ENST00000373831
Ensembl:ENST00000373832 Ensembl:ENST00000373833
Ensembl:ENST00000398958 GeneID:1104 KEGG:hsa:1104 UCSC:uc001bqa.2
UCSC:uc001bqf.2 CTD:1104 GeneCards:GC01P028834 HGNC:HGNC:1913
HPA:CAB015413 HPA:HPA027573 HPA:HPA027574 MIM:179710
neXtProt:NX_P18754 PharmGKB:PA26449 HOGENOM:HOG000234341
HOVERGEN:HBG017712 OMA:RETTEEG PhylomeDB:P18754
EvolutionaryTrace:P18754 GenomeRNAi:1104 NextBio:4572
ArrayExpress:P18754 Bgee:P18754 CleanEx:HS_RCC1
Genevestigator:P18754 GermOnline:ENSG00000180198 Uniprot:P18754
Length = 421
Score = 201 (75.8 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 89/369 (24%), Positives = 154/369 (41%)
Query: 49 RLRP-LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR--PTIVS 105
R +P LV + V A H V + G+ Y++G N+ G LG ++ P V
Sbjct: 57 RKKPALVSIPEDVVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKV- 115
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW--NKHGQLGS-GSIRNEIEPSPVRCLVSE 162
EL + K+ + AG SHT +T+DG +G + +G +G ++ + P V+ V
Sbjct: 116 ELQE-KVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDVP- 173
Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
V A G D V L++ +G + G + GQLG + + L P+
Sbjct: 174 VVKVASGNDHLVMLTA-DG-DLYTLGCGEQGQLGR-VPELFANRGGRQGLERLLVPKCVM 230
Query: 223 IAALAGETIVKVA---CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
+ + V+ CG T A+ +G+VY +G Y +LG + ++P+ + F+
Sbjct: 231 LKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFK 290
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLSGWN 332
N S G ++ C G+ Y G+ L ++ P + L +
Sbjct: 291 --NSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVS 348
Query: 333 -LRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVAC 391
+ C ++ + V D +WG +LG G S + LE V+SV+
Sbjct: 349 SVAC--GASVGYAVTKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMMGKQLENRVVLSVSS 406
Query: 392 GYGHSLVIV 400
G H++++V
Sbjct: 407 GGQHTVLLV 415
Score = 144 (55.7 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 55/189 (29%), Positives = 86/189 (45%)
Query: 77 GRCYTWGRNERGQLGHGDKI-QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G T G+ + GQLG G+ + +R +P +VS + +A AG HTV +++ G +FG
Sbjct: 35 GLVLTLGQGDVGQLGLGENVMERKKPALVS--IPEDVVQAEAGGMHTVCLSKSGQVYSFG 92
Query: 136 WNKHGQLGSG-SIR-NEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
N G LG S+ +E+ P V L +V + G T L+ +G L +G
Sbjct: 93 CNDEGALGRDTSVEGSEMVPGKVE-LQEKVVQVSAGDSHTAALTD-DGRVFL------WG 144
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
DN + + L + + +VKVA G +H V + + G +YT
Sbjct: 145 SF---RDN-----NGVIGLLEPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTADGDLYTL 196
Query: 254 GFGGYGRLG 262
G G G+LG
Sbjct: 197 GCGEQGQLG 205
>UNIPROTKB|Q8TD19 [details] [associations]
symbol:NEK9 "Serine/threonine-protein kinase Nek9"
species:9606 "Homo sapiens" [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005739 "mitochondrion" evidence=IDA]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0051301
GO:GO:0007067 GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
EMBL:AC007055 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
KO:K08857 CleanEx:HS_NEK8 EMBL:AY048580 EMBL:AY080896 EMBL:AB082526
EMBL:BC009336 EMBL:BC093881 EMBL:BC112101 IPI:IPI00301609
RefSeq:NP_149107.4 UniGene:Hs.7200 ProteinModelPortal:Q8TD19
SMR:Q8TD19 IntAct:Q8TD19 MINT:MINT-2984282 STRING:Q8TD19
PhosphoSite:Q8TD19 DMDM:116242675 PaxDb:Q8TD19 PeptideAtlas:Q8TD19
PRIDE:Q8TD19 DNASU:91754 Ensembl:ENST00000238616 GeneID:91754
KEGG:hsa:91754 UCSC:uc001xrl.3 CTD:91754 GeneCards:GC14M075548
HGNC:HGNC:18591 HPA:HPA001405 MIM:609798 neXtProt:NX_Q8TD19
PharmGKB:PA38593 HOVERGEN:HBG039572 InParanoid:Q8TD19 OMA:GCDGTFL
OrthoDB:EOG4NZTSM PhylomeDB:Q8TD19 BindingDB:Q8TD19
ChEMBL:CHEMBL5257 GenomeRNAi:91754 NextBio:77443
ArrayExpress:Q8TD19 Bgee:Q8TD19 CleanEx:HS_NEK9
Genevestigator:Q8TD19 GermOnline:ENSG00000119638 Uniprot:Q8TD19
Length = 979
Score = 204 (76.9 bits), Expect = 3.3e-13, Sum P(2) = 3.3e-13
Identities = 68/230 (29%), Positives = 102/230 (44%)
Query: 42 GNLVSPTRLRPLV-GVDIRFVAAGCVSCHCVAVDVEGRCYTW-----GRNERGQLGHGDK 95
G +P +L + G R V AG + H V VE YTW G GQLGHGDK
Sbjct: 354 GGKSTPQKLDVIKSGCSARQVCAG--NTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDK 411
Query: 96 IQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNE--IEP 153
+P V +L I++ G TV VT++G AFG + +G +G + +EP
Sbjct: 412 ASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEP 471
Query: 154 SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
+ +S V +CG + V L+ + + G +YG+LG ++ +Y T V +
Sbjct: 472 MQLNFFLSNPVEQVSCGDNHVVVLT--RNKEVYSWGCGEYGRLGLDSEEDYYTPQK-VDV 528
Query: 213 AYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
P+A+ IV V CG + T + G V G + +LG
Sbjct: 529 -------PKALI------IVAVQCGCDGTFLLTQSGKVLACGLNEFNKLG 565
Score = 183 (69.5 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 81/312 (25%), Positives = 131/312 (41%)
Query: 117 AGRSHTVVVTEDGN-----SLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGA 170
AG +H VVT + ++ G HGQLG G + +P V L + + +CG
Sbjct: 376 AGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGD 435
Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
DFTV ++ EG + G YG +G D K+A P +
Sbjct: 436 DFTVCVTD-EG-QLYAFGSDYYGCMG--VD----------KVAGPEVLEPMQLNFFLSNP 481
Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEA-- 288
+ +V+CG NH V + VY+WG G YGRLG ++D + P++VDV + ++ +
Sbjct: 482 VEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGC 541
Query: 289 -----VISAGSV-----NSSCTAGGGQLYMWGKLKNNG-DDWMYPKPLM---DLSGWNLR 334
+ +G V N G Q M G + + + Y LS + +R
Sbjct: 542 DGTFLLTQSGKVLACGLNEFNKLGLNQC-MSGIINHEAYHEVPYTTSFTLAKQLSFYKIR 600
Query: 335 CMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGY 393
+ G H + +++G + G+LG G Y +K + L G VI V+CG
Sbjct: 601 TIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNY-KKRLGINLLGGPLGGKQVIRVSCGD 659
Query: 394 GHSLVIVDRTNV 405
++ D ++
Sbjct: 660 EFTIAATDDNHI 671
Score = 178 (67.7 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 84/323 (26%), Positives = 139/323 (43%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L G IR V+ G CV D EG+ Y +G + G +G DK+ +
Sbjct: 417 PKHVEKLQGKAIRQVSCGDDFTVCVT-D-EGQLYAFGSDYYGCMGV-DKVAGPEVLEPMQ 473
Query: 107 LSKY---KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV---RCLV 160
L+ + +++ G +H VV+T + ++G ++G+LG S + P V + L+
Sbjct: 474 LNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALI 533
Query: 161 SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
+ A CG D T L+ + +L GL ++ +LG N+ + + + AY P
Sbjct: 534 --IVAVQCGCDGTFLLT--QSGKVLACGLNEFNKLGL---NQCMSGIINHE-AYHEVPYT 585
Query: 221 RAIAA---LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
+ L+ I +A G HT A+D +G + T+G G+LG K +R+ +
Sbjct: 586 TSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYK-----KRLGI 640
Query: 278 FQRNNVLPPEAVI--SAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYP--KPL-MDL-SGW 331
L + VI S G + ++ WG NG M P +P D+ + W
Sbjct: 641 NLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGN-GGNGRLAMTPTERPHGSDICTSW 699
Query: 332 NLRCMDSGNMHHFVGADSSCISW 354
G++HH D SC W
Sbjct: 700 PRPIF--GSLHHV--PDLSCRGW 718
Score = 141 (54.7 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 65/250 (26%), Positives = 100/250 (40%)
Query: 26 GSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRN 85
GS + +G K A ++ P +L + + V+ G H V + Y+WG
Sbjct: 451 GSDYYGCMGVDKVA-GPEVLEPMQLNFFLSNPVEQVSCG--DNHVVVLTRNKEVYSWGCG 507
Query: 86 ERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-- 143
E G+LG + P V I G T ++T+ G LA G N+ +LG
Sbjct: 508 EYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLN 567
Query: 144 ---SGSIRNEIE---PSPVRCLVSE------VTATACGADFTVWLSSVEGASILNAGLPQ 191
SG I +E P +++ + A G T + E +L G +
Sbjct: 568 QCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAID--ERGRLLTFGCNK 625
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
GQLG G N K +L P L G+ +++V+CG T+A +++
Sbjct: 626 CGQLGVG-----NYKK---RLGINLLGGP-----LGGKQVIRVSCGDEFTIAATDDNHIF 672
Query: 252 TWGFGGYGRL 261
WG GG GRL
Sbjct: 673 AWGNGGNGRL 682
Score = 128 (50.1 bits), Expect = 0.00011, P = 0.00011
Identities = 54/230 (23%), Positives = 96/230 (41%)
Query: 180 EGASILNAGL--PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL-AGETIVKVAC 236
E ++LNA P+ + ++ S V + + P+ + + +G + +V
Sbjct: 317 EKVTLLNAPTKRPRSSTVTEAPIAVVTSRTSEVYVWGGGKSTPQKLDVIKSGCSARQVCA 376
Query: 237 GTNHTVAVDSKGYVYTWGF--GG---YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
G H V + +YTW GG +G+LGH ++ P+ V+ Q + +S
Sbjct: 377 GNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQ----VS 432
Query: 292 AGSVNSSCTAGGGQLYMWGKL--------KNNGDDWMYPKPLMDLSGWNLRCMDSGNMHH 343
G + C GQLY +G K G + + P L + + G+ H
Sbjct: 433 CGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFFLSNPVEQVSCGDNHV 492
Query: 344 FV-GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
V + SWG +YG LG ++ P+KVD+ + + +++V CG
Sbjct: 493 VVLTRNKEVYSWGCGEYGRLGLD--SEEDYYTPQKVDVPKALIIVAVQCG 540
Score = 46 (21.3 bits), Expect = 3.3e-13, Sum P(2) = 3.3e-13
Identities = 14/60 (23%), Positives = 29/60 (48%)
Query: 348 DSSCISWGHAQYGELGYGP----YGQK-SSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
D+ +WG+ G L P +G ++ P+ + HV ++C H+++IV++
Sbjct: 668 DNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPI-FGSLHHVPDLSCRGWHTILIVEK 726
Score = 43 (20.2 bits), Expect = 6.7e-13, Sum P(2) = 6.7e-13
Identities = 14/39 (35%), Positives = 17/39 (43%)
Query: 302 GGGQLYMWGKLKNNGDDWMY--PKPLMDLSGWNLRCMDS 338
GG Q+ M K + M PKP +D W L DS
Sbjct: 936 GGQQVGMHSKGTQTAKEEMEMDPKPDLDSDSWCLLGTDS 974
Score = 37 (18.1 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 20/72 (27%), Positives = 31/72 (43%)
Query: 290 ISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNL--RCMD-----SGNMH 342
+S G+V S + GGG G+ +++ + P P G R M+ + M
Sbjct: 740 LSIGTVFQSSSPGGGGGGGGGEEEDSQQESETPDPSGGFRGTMEADRGMEGLISPTEAMG 799
Query: 343 HFVGADSSCISW 354
+ GA SSC W
Sbjct: 800 NSNGASSSCPGW 811
>UNIPROTKB|Q74AS9 [details] [associations]
symbol:GSU2272 "ATS1 domain repeat lipoprotein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 RefSeq:NP_953321.1
ProteinModelPortal:Q74AS9 GeneID:2686981 KEGG:gsu:GSU2272
PATRIC:22027399 HOGENOM:HOG000020996 OMA:TGTALAW
BioCyc:GSUL243231:GH27-2248-MONOMER Uniprot:Q74AS9
Length = 403
Score = 198 (74.8 bits), Expect = 3.8e-13, P = 3.8e-13
Identities = 85/272 (31%), Positives = 118/272 (43%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG--DKIQRDRPTI 103
+P ++ G ++ VAAG H +A+ G + WG N GQL R P
Sbjct: 130 TPVKIGGFGGA-VQQVAAG--GLHSMAL-AGGTVWAWGSNSAGQLALNPISSATRFAPRQ 185
Query: 104 VSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS 161
V E +K I AG SH++ T + A+G N GQLG+G+ + P V+ L S
Sbjct: 186 V-ETAKLPIAPTAIVAGGSHSIAYTST-EAYAWGNNASGQLGNGTTLSNHMPQKVQ-LPS 242
Query: 162 EVTAT--ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
+T + G + L S GA I G YGQLG+GT +T V+L P
Sbjct: 243 SITIRKISAGGSHNLALDST-GA-IWAWGSNAYGQLGNGTTTNQSTP---VQLTL---P- 293
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
A + G + V G +H+VAV S VYTWGF G L D+ P +V
Sbjct: 294 ----AGVTG--FIDVFAGPSHSVAVASNFTVYTWGFNTLGLLSVGTTGDQLSPAQVRDAS 347
Query: 280 RNNVLPPEAVISAGSVNSSCTAGG-GQLYMWG 310
E V+ GS + G G ++ WG
Sbjct: 348 NVPFTDVERVVLLGSFFTIVKKNGSGGMWAWG 379
Score = 183 (69.5 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 74/263 (28%), Positives = 107/263 (40%)
Query: 22 LLFCGSTCWDAVGRRKGALDGNLVSP-TRLRP----LVGVDIRFVAAGCVSCHCVAVDVE 76
+ G T W G L N +S TR P + I A H +A
Sbjct: 152 MALAGGTVWAWGSNSAGQLALNPISSATRFAPRQVETAKLPIAPTAIVAGGSHSIAY-TS 210
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
Y WG N GQLG+G + P V S I+K AG SH + + G A+G
Sbjct: 211 TEAYAWGNNASGQLGNGTTLSNHMPQKVQLPSSITIRKISAGGSHNLALDSTGAIWAWGS 270
Query: 137 NKHGQLGSGSIRNEIEPSPVRCLVSEVTA---TACGADFTVWLSSVEGASILNAGLPQYG 193
N +GQLG+G+ N+ P + L + VT G +V ++S ++ G G
Sbjct: 271 NAYGQLGNGTTTNQSTPVQLT-LPAGVTGFIDVFAGPSHSVAVAS--NFTVYTWGFNTLG 327
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV-DSKGYVYT 252
L GT T D +L+ AQ R + V V G+ T+ + G ++
Sbjct: 328 LLSVGT-----TGD---QLS-PAQVRDASNVPFTDVERV-VLLGSFFTIVKKNGSGGMWA 377
Query: 253 WGFGGYGRLGHREQKDEWVPRRV 275
WG+ GYG+LG + P +V
Sbjct: 378 WGYNGYGQLGDGTTSNRTAPVQV 400
Score = 166 (63.5 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 73/298 (24%), Positives = 126/298 (42%)
Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC-LVSEVTATACGADFTVWLSS 178
SH+ V +G N+ GQLG G+ + P +R + + A GA T+ ++
Sbjct: 41 SHSAVFQNMTTLAVWGNNESGQLGDGTTTSAATPKRLRLGFATYSSGFATGASHTLAIAR 100
Query: 179 VEGASILNA-GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
+ S + A G GQ+G T + VK I G + +VA G
Sbjct: 101 FDNVSGVRAWGSNSAGQIGRDPAT-VPTSSTPVK-----------IGGFGG-AVQQVAAG 147
Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHR--EQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
H++A+ + G V+ WG G+L + PR+V+ + + P A+++ GS
Sbjct: 148 GLHSMAL-AGGTVWAWGSNSAGQLALNPISSATRFAPRQVETAKLP--IAPTAIVAGGSH 204
Query: 296 NSSCTAGGGQLYMWGKLKN----NGDDWM--YPKPLMDLSGWNLRCMDSGNMHHFVGADS 349
+ + T+ + Y WG + NG P+ + S +R + +G H+ +
Sbjct: 205 SIAYTST--EAYAWGNNASGQLGNGTTLSNHMPQKVQLPSSITIRKISAGGSHNLALDST 262
Query: 350 SCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMH-VISVACGYGHSLVIVDRTNV 405
I +WG YG+LG G +S+ P ++ + G+ I V G HS+ + V
Sbjct: 263 GAIWAWGSNAYGQLGNGTTTNQST--PVQLTLPAGVTGFIDVFAGPSHSVAVASNFTV 318
Score = 134 (52.2 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 77/305 (25%), Positives = 115/305 (37%)
Query: 82 WGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTEDGNSL---AFGWN 137
WG NE GQLG G P + + Y A G SHT+ + N A+G N
Sbjct: 55 WGNNESGQLGDGTTTSAATPKRLRLGFATYSSGFA-TGASHTLAIARFDNVSGVRAWGSN 113
Query: 138 KHGQLGSGSIRNEIEPSPVRC--LVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
GQ+G +PV+ V A G ++ L+ G ++ G GQL
Sbjct: 114 SAGQIGRDPATVPTSSTPVKIGGFGGAVQQVAAGGLHSMALA---GGTVWAWGSNSAGQL 170
Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
N S+ + A PR A L VA G +H++A S Y WG
Sbjct: 171 A------LNPISSATRFA----PRQVETAKLPIAPTAIVA-GGSHSIAYTSTE-AYAWGN 218
Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK-- 313
G+LG+ +P++V + + ISAG ++ G ++ WG
Sbjct: 219 NASGQLGNGTTLSNHMPQKVQLPSSITIRK----ISAGGSHNLALDSTGAIWAWGSNAYG 274
Query: 314 --NNGDDWMYPKPL-MDLSGWNLRCMD--SGNMHHF-VGADSSCISWGHAQYGELGYGPY 367
NG P+ + L +D +G H V ++ + +WG G L G
Sbjct: 275 QLGNGTTTNQSTPVQLTLPAGVTGFIDVFAGPSHSVAVASNFTVYTWGFNTLGLLSVGTT 334
Query: 368 GQKSS 372
G + S
Sbjct: 335 GDQLS 339
>TIGR_CMR|GSU_2272 [details] [associations]
symbol:GSU_2272 "lipoprotein, putative" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 RefSeq:NP_953321.1
ProteinModelPortal:Q74AS9 GeneID:2686981 KEGG:gsu:GSU2272
PATRIC:22027399 HOGENOM:HOG000020996 OMA:TGTALAW
BioCyc:GSUL243231:GH27-2248-MONOMER Uniprot:Q74AS9
Length = 403
Score = 198 (74.8 bits), Expect = 3.8e-13, P = 3.8e-13
Identities = 85/272 (31%), Positives = 118/272 (43%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG--DKIQRDRPTI 103
+P ++ G ++ VAAG H +A+ G + WG N GQL R P
Sbjct: 130 TPVKIGGFGGA-VQQVAAG--GLHSMAL-AGGTVWAWGSNSAGQLALNPISSATRFAPRQ 185
Query: 104 VSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS 161
V E +K I AG SH++ T + A+G N GQLG+G+ + P V+ L S
Sbjct: 186 V-ETAKLPIAPTAIVAGGSHSIAYTST-EAYAWGNNASGQLGNGTTLSNHMPQKVQ-LPS 242
Query: 162 EVTAT--ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
+T + G + L S GA I G YGQLG+GT +T V+L P
Sbjct: 243 SITIRKISAGGSHNLALDST-GA-IWAWGSNAYGQLGNGTTTNQSTP---VQLTL---P- 293
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
A + G + V G +H+VAV S VYTWGF G L D+ P +V
Sbjct: 294 ----AGVTG--FIDVFAGPSHSVAVASNFTVYTWGFNTLGLLSVGTTGDQLSPAQVRDAS 347
Query: 280 RNNVLPPEAVISAGSVNSSCTAGG-GQLYMWG 310
E V+ GS + G G ++ WG
Sbjct: 348 NVPFTDVERVVLLGSFFTIVKKNGSGGMWAWG 379
Score = 183 (69.5 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 74/263 (28%), Positives = 107/263 (40%)
Query: 22 LLFCGSTCWDAVGRRKGALDGNLVSP-TRLRP----LVGVDIRFVAAGCVSCHCVAVDVE 76
+ G T W G L N +S TR P + I A H +A
Sbjct: 152 MALAGGTVWAWGSNSAGQLALNPISSATRFAPRQVETAKLPIAPTAIVAGGSHSIAY-TS 210
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
Y WG N GQLG+G + P V S I+K AG SH + + G A+G
Sbjct: 211 TEAYAWGNNASGQLGNGTTLSNHMPQKVQLPSSITIRKISAGGSHNLALDSTGAIWAWGS 270
Query: 137 NKHGQLGSGSIRNEIEPSPVRCLVSEVTA---TACGADFTVWLSSVEGASILNAGLPQYG 193
N +GQLG+G+ N+ P + L + VT G +V ++S ++ G G
Sbjct: 271 NAYGQLGNGTTTNQSTPVQLT-LPAGVTGFIDVFAGPSHSVAVAS--NFTVYTWGFNTLG 327
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV-DSKGYVYT 252
L GT T D +L+ AQ R + V V G+ T+ + G ++
Sbjct: 328 LLSVGT-----TGD---QLS-PAQVRDASNVPFTDVERV-VLLGSFFTIVKKNGSGGMWA 377
Query: 253 WGFGGYGRLGHREQKDEWVPRRV 275
WG+ GYG+LG + P +V
Sbjct: 378 WGYNGYGQLGDGTTSNRTAPVQV 400
Score = 166 (63.5 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 73/298 (24%), Positives = 126/298 (42%)
Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC-LVSEVTATACGADFTVWLSS 178
SH+ V +G N+ GQLG G+ + P +R + + A GA T+ ++
Sbjct: 41 SHSAVFQNMTTLAVWGNNESGQLGDGTTTSAATPKRLRLGFATYSSGFATGASHTLAIAR 100
Query: 179 VEGASILNA-GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
+ S + A G GQ+G T + VK I G + +VA G
Sbjct: 101 FDNVSGVRAWGSNSAGQIGRDPAT-VPTSSTPVK-----------IGGFGG-AVQQVAAG 147
Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHR--EQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
H++A+ + G V+ WG G+L + PR+V+ + + P A+++ GS
Sbjct: 148 GLHSMAL-AGGTVWAWGSNSAGQLALNPISSATRFAPRQVETAKLP--IAPTAIVAGGSH 204
Query: 296 NSSCTAGGGQLYMWGKLKN----NGDDWM--YPKPLMDLSGWNLRCMDSGNMHHFVGADS 349
+ + T+ + Y WG + NG P+ + S +R + +G H+ +
Sbjct: 205 SIAYTST--EAYAWGNNASGQLGNGTTLSNHMPQKVQLPSSITIRKISAGGSHNLALDST 262
Query: 350 SCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMH-VISVACGYGHSLVIVDRTNV 405
I +WG YG+LG G +S+ P ++ + G+ I V G HS+ + V
Sbjct: 263 GAIWAWGSNAYGQLGNGTTTNQST--PVQLTLPAGVTGFIDVFAGPSHSVAVASNFTV 318
Score = 134 (52.2 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 77/305 (25%), Positives = 115/305 (37%)
Query: 82 WGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTEDGNSL---AFGWN 137
WG NE GQLG G P + + Y A G SHT+ + N A+G N
Sbjct: 55 WGNNESGQLGDGTTTSAATPKRLRLGFATYSSGFA-TGASHTLAIARFDNVSGVRAWGSN 113
Query: 138 KHGQLGSGSIRNEIEPSPVRC--LVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
GQ+G +PV+ V A G ++ L+ G ++ G GQL
Sbjct: 114 SAGQIGRDPATVPTSSTPVKIGGFGGAVQQVAAGGLHSMALA---GGTVWAWGSNSAGQL 170
Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
N S+ + A PR A L VA G +H++A S Y WG
Sbjct: 171 A------LNPISSATRFA----PRQVETAKLPIAPTAIVA-GGSHSIAYTSTE-AYAWGN 218
Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK-- 313
G+LG+ +P++V + + ISAG ++ G ++ WG
Sbjct: 219 NASGQLGNGTTLSNHMPQKVQLPSSITIRK----ISAGGSHNLALDSTGAIWAWGSNAYG 274
Query: 314 --NNGDDWMYPKPL-MDLSGWNLRCMD--SGNMHHF-VGADSSCISWGHAQYGELGYGPY 367
NG P+ + L +D +G H V ++ + +WG G L G
Sbjct: 275 QLGNGTTTNQSTPVQLTLPAGVTGFIDVFAGPSHSVAVASNFTVYTWGFNTLGLLSVGTT 334
Query: 368 GQKSS 372
G + S
Sbjct: 335 GDQLS 339
>UNIPROTKB|F1MD33 [details] [associations]
symbol:F1MD33 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0005929 "cilium" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104160 EMBL:DAAA02073693
IPI:IPI00698306 Ensembl:ENSBTAT00000005090 OMA:SAEKHET
Uniprot:F1MD33
Length = 158
Score = 178 (67.7 bits), Expect = 4.6e-13, P = 4.6e-13
Identities = 54/171 (31%), Positives = 80/171 (46%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSEL-SKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G+ Y G N GQLG GD +R ++S S++KIK+ AG + + +T +G FG
Sbjct: 3 GQVYATGGNNEGQLGLGDTDERSAFHLISFFTSQHKIKQLSAGSNTSAALTAEGELYTFG 62
Query: 136 WNKHGQLGSGS--IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
+ G+LG + N P V + +V ACG TV L+ ++ GL Q+G
Sbjct: 63 EPESGKLGLPPKLLVNHKVPQLVPGISEKVIQVACGGGHTVVLTE---KAVYTFGLGQFG 119
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV 244
QLG GT +E P+ I ++ + I V CG NHT +
Sbjct: 120 QLGLGT------------FTFETS-EPKVIESVKDKKISHVCCGENHTALI 157
Score = 129 (50.5 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 39/124 (31%), Positives = 62/124 (50%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDK--IQRDRPTIVSELSKYKIKKA 115
I+ ++AG S A+ EG YT+G E G+LG K + P +V +S+ K+ +
Sbjct: 39 IKQLSAG--SNTSAALTAEGELYTFGEPESGKLGLPPKLLVNHKVPQLVPGISE-KVIQV 95
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEI-EPSPVRCLVSE-VTATACGADFT 173
G HTVV+TE FG + GQLG G+ E EP + + + ++ CG + T
Sbjct: 96 ACGGGHTVVLTEKA-VYTFGLGQFGQLGLGTFTFETSEPKVIESVKDKKISHVCCGENHT 154
Query: 174 VWLS 177
++
Sbjct: 155 ALIT 158
Score = 113 (44.8 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 39/160 (24%), Positives = 74/160 (46%)
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G VY G G+LG + + + F + + +SAGS S+ G+LY
Sbjct: 3 GQVYATGGNNEGQLGLGDTDERSAFHLISFFTSQHKIKQ---LSAGSNTSAALTAEGELY 59
Query: 308 MWGKLKNNGDDWMYPKPLMD------LSGWNLRCMD--SGNMHHFVGADSSCISWGHAQY 359
+G+ +G + PK L++ + G + + + G H V + + ++G Q+
Sbjct: 60 TFGE-PESGKLGLPPKLLVNHKVPQLVPGISEKVIQVACGGGHTVVLTEKAVYTFGLGQF 118
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G+LG G + ++S PK ++ ++ + V CG H+ +I
Sbjct: 119 GQLGLGTFTFETSE-PKVIESVKDKKISHVCCGENHTALI 157
Score = 107 (42.7 bits), Expect = 0.00030, P = 0.00030
Identities = 39/136 (28%), Positives = 62/136 (45%)
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE--VTATACGADFTVWLSSVEGASILN 186
G A G N GQLG G + S+ + + G++ + L++ EG +
Sbjct: 3 GQVYATGGNNEGQLGLGDTDERSAFHLISFFTSQHKIKQLSAGSNTSAALTA-EG-ELYT 60
Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDS 246
G P+ G+LG N K P+ + ++ E +++VACG HTV +
Sbjct: 61 FGEPESGKLGLPPKLLVNHKV------------PQLVPGIS-EKVIQVACGGGHTVVLTE 107
Query: 247 KGYVYTWGFGGYGRLG 262
K VYT+G G +G+LG
Sbjct: 108 KA-VYTFGLGQFGQLG 122
>UNIPROTKB|E2QYP0 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
Pfam:PF00069 PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104074 CTD:91754 OMA:GCDGTFL
EMBL:AAEX03005855 RefSeq:XP_547912.3 Ensembl:ENSCAFT00000026967
GeneID:490790 KEGG:cfa:490790 NextBio:20863745 Uniprot:E2QYP0
Length = 976
Score = 201 (75.8 bits), Expect = 7.2e-13, Sum P(2) = 7.2e-13
Identities = 67/230 (29%), Positives = 102/230 (44%)
Query: 42 GNLVSPTRLRPLV-GVDIRFVAAGCVSCHCVAVDVEGRCYTW-----GRNERGQLGHGDK 95
G +P +L + G R V AG + H V VE YTW G GQLGHGDK
Sbjct: 354 GGKSTPQKLDVIKSGCSARQVCAG--NTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDK 411
Query: 96 IQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNE--IEP 153
+P V +L I++ G TV VT++G AFG + +G +G + +EP
Sbjct: 412 ASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEP 471
Query: 154 SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
+ ++ V +CG + V L+ + + G +YG+LG ++ +Y T V +
Sbjct: 472 MQLNFFLNNPVEQVSCGDNHVVVLT--RNKEVYSWGCGEYGRLGLDSEEDYYTPQK-VDV 528
Query: 213 AYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
P+A+ IV V CG + T + G V G + +LG
Sbjct: 529 -------PKALI------IVAVQCGCDGTFLLTQSGKVLACGLNEFNKLG 565
Score = 183 (69.5 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 81/312 (25%), Positives = 131/312 (41%)
Query: 117 AGRSHTVVVTEDGN-----SLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGA 170
AG +H VVT + ++ G HGQLG G + +P V L + + +CG
Sbjct: 376 AGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGD 435
Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
DFTV ++ EG + G YG +G D K+A P +
Sbjct: 436 DFTVCVTD-EG-QLYAFGSDYYGCMG--VD----------KVAGPEVLEPMQLNFFLNNP 481
Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEA-- 288
+ +V+CG NH V + VY+WG G YGRLG ++D + P++VDV + ++ +
Sbjct: 482 VEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGC 541
Query: 289 -----VISAGSV-----NSSCTAGGGQLYMWGKLKNNG-DDWMYPKPLM---DLSGWNLR 334
+ +G V N G Q M G + + + Y LS + +R
Sbjct: 542 DGTFLLTQSGKVLACGLNEFNKLGLNQC-MSGIINHEAYHEIPYTTSFTLAKQLSFYKIR 600
Query: 335 CMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGY 393
+ G H + +++G + G+LG G Y +K + L G VI V+CG
Sbjct: 601 TIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNY-KKRLGINLLGGPLGGKQVIRVSCGD 659
Query: 394 GHSLVIVDRTNV 405
++ D ++
Sbjct: 660 EFTIAATDDNHI 671
Score = 177 (67.4 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 84/323 (26%), Positives = 139/323 (43%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L G IR V+ G CV D EG+ Y +G + G +G DK+ +
Sbjct: 417 PKHVEKLQGKAIRQVSCGDDFTVCVT-D-EGQLYAFGSDYYGCMGV-DKVAGPEVLEPMQ 473
Query: 107 LSKY---KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV---RCLV 160
L+ + +++ G +H VV+T + ++G ++G+LG S + P V + L+
Sbjct: 474 LNFFLNNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALI 533
Query: 161 SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
+ A CG D T L+ + +L GL ++ +LG N+ + + + AY P
Sbjct: 534 --IVAVQCGCDGTFLLT--QSGKVLACGLNEFNKLGL---NQCMSGIINHE-AYHEIPYT 585
Query: 221 RAIAA---LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
+ L+ I +A G HT A+D +G + T+G G+LG K +R+ +
Sbjct: 586 TSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYK-----KRLGI 640
Query: 278 FQRNNVLPPEAVI--SAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYP--KPL-MDL-SGW 331
L + VI S G + ++ WG NG M P +P D+ + W
Sbjct: 641 NLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGN-GGNGRLAMTPTERPHGSDICTSW 699
Query: 332 NLRCMDSGNMHHFVGADSSCISW 354
G++HH D SC W
Sbjct: 700 PRPIF--GSLHHV--PDLSCRGW 718
Score = 141 (54.7 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 65/250 (26%), Positives = 100/250 (40%)
Query: 26 GSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRN 85
GS + +G K A ++ P +L + + V+ G H V + Y+WG
Sbjct: 451 GSDYYGCMGVDKVA-GPEVLEPMQLNFFLNNPVEQVSCG--DNHVVVLTRNKEVYSWGCG 507
Query: 86 ERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-- 143
E G+LG + P V I G T ++T+ G LA G N+ +LG
Sbjct: 508 EYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLN 567
Query: 144 ---SGSIRNEIE---PSPVRCLVSE------VTATACGADFTVWLSSVEGASILNAGLPQ 191
SG I +E P +++ + A G T + E +L G +
Sbjct: 568 QCMSGIINHEAYHEIPYTTSFTLAKQLSFYKIRTIAPGKTHTAAID--ERGRLLTFGCNK 625
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
GQLG G N K +L P L G+ +++V+CG T+A +++
Sbjct: 626 CGQLGVG-----NYKK---RLGINLLGGP-----LGGKQVIRVSCGDEFTIAATDDNHIF 672
Query: 252 TWGFGGYGRL 261
WG GG GRL
Sbjct: 673 AWGNGGNGRL 682
Score = 128 (50.1 bits), Expect = 0.00011, P = 0.00011
Identities = 54/230 (23%), Positives = 96/230 (41%)
Query: 180 EGASILNAGL--PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL-AGETIVKVAC 236
E ++LNA P+ + ++ S V + + P+ + + +G + +V
Sbjct: 317 EKVTLLNAPTKRPRSSTVTEAPIAVVTSRTSEVYVWGGGKSTPQKLDVIKSGCSARQVCA 376
Query: 237 GTNHTVAVDSKGYVYTWGF--GG---YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
G H V + +YTW GG +G+LGH ++ P+ V+ Q + +S
Sbjct: 377 GNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQ----VS 432
Query: 292 AGSVNSSCTAGGGQLYMWGKL--------KNNGDDWMYPKPLMDLSGWNLRCMDSGNMHH 343
G + C GQLY +G K G + + P L + + G+ H
Sbjct: 433 CGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFFLNNPVEQVSCGDNHV 492
Query: 344 FV-GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
V + SWG +YG LG ++ P+KVD+ + + +++V CG
Sbjct: 493 VVLTRNKEVYSWGCGEYGRLGLD--SEEDYYTPQKVDVPKALIIVAVQCG 540
Score = 46 (21.3 bits), Expect = 7.2e-13, Sum P(2) = 7.2e-13
Identities = 14/60 (23%), Positives = 29/60 (48%)
Query: 348 DSSCISWGHAQYGELGYGP----YGQK-SSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
D+ +WG+ G L P +G ++ P+ + HV ++C H+++IV++
Sbjct: 668 DNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPI-FGSLHHVPDLSCRGWHTILIVEK 726
Score = 43 (20.2 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 14/39 (35%), Positives = 17/39 (43%)
Query: 302 GGGQLYMWGKLKNNGDDWMY--PKPLMDLSGWNLRCMDS 338
GG Q+ M K + M PKP +D W L DS
Sbjct: 933 GGQQVGMHSKGTQTAKEEMEMDPKPDLDSDSWCLLGTDS 971
>MGI|MGI:1913989 [details] [associations]
symbol:Rcc1 "regulator of chromosome condensation 1"
species:10090 "Mus musculus" [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0000794 "condensed nuclear chromosome"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=ISO;IDA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007052
"mitotic spindle organization" evidence=ISO] [GO:0007059
"chromosome segregation" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007088 "regulation of mitosis" evidence=ISO]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=ISO] [GO:0031492 "nucleosomal DNA binding" evidence=ISO]
[GO:0042393 "histone binding" evidence=ISO] [GO:0050790 "regulation
of catalytic activity" evidence=IDA] [GO:0051225 "spindle assembly"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
MGI:MGI:1913989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0007088 GO:GO:0007059 GO:GO:0051301
GO:GO:0007067 GO:GO:0007052 GO:GO:0051225 GO:GO:0000082
GO:GO:0031965 GO:GO:0000790 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0000794 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GO:GO:0007090 GO:GO:0031492 GeneTree:ENSGT00700000104160 KO:K11493
CTD:1104 HOGENOM:HOG000234341 HOVERGEN:HBG017712 EMBL:AK150153
EMBL:BC019807 IPI:IPI00626402 RefSeq:NP_598639.1 UniGene:Mm.255045
ProteinModelPortal:Q8VE37 SMR:Q8VE37 MINT:MINT-2568412
STRING:Q8VE37 PhosphoSite:Q8VE37 PaxDb:Q8VE37 PRIDE:Q8VE37
Ensembl:ENSMUST00000084250 Ensembl:ENSMUST00000105951 GeneID:100088
KEGG:mmu:100088 OrthoDB:EOG4320Z9 ChiTaRS:RCC1 NextBio:354253
Bgee:Q8VE37 CleanEx:MM_RCC1 Genevestigator:Q8VE37
GermOnline:ENSMUSG00000028896 Uniprot:Q8VE37
Length = 421
Score = 196 (74.1 bits), Expect = 7.4e-13, P = 7.4e-13
Identities = 90/367 (24%), Positives = 154/367 (41%)
Query: 50 LRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR--PTIVSEL 107
L PL+ D+ AG H V + G+ Y++G N+ G LG ++ P V EL
Sbjct: 62 LVPLLQ-DVVQAEAG--GMHTVCLSQSGQVYSFGCNDEGALGRDTSVEGSEMVPGKV-EL 117
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGW--NKHGQLGS-GSIRNEIEPSPVRCLVSEVT 164
+ K+ + AG SHT +TEDG +G + +G +G ++ + P V+ L + V
Sbjct: 118 QE-KVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQ-LDAPVV 175
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
A G D V L++ +G + G + GQLG + + L PR +
Sbjct: 176 KVASGNDHLVMLTN-DG-DLYTLGCGEQGQLGR-VPELFANRGGRQGLGRLLVPRCVLLK 232
Query: 225 ALAGETIVKVA---CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
+ V+ CG T A+ +G+VY +G Y +LG ++P+ + F+
Sbjct: 233 SRGTRGRVRFQDAFCGAYFTFAISREGHVYGFGLSNYHQLGTPGTGSCFIPQNLTSFK-- 290
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLSGWN-L 333
N S G ++ C G+ Y G+ L ++ P + L + +
Sbjct: 291 NSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPVVSSV 350
Query: 334 RCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGY 393
C ++ + V D +WG +LG G S + LE V++V+ G
Sbjct: 351 AC--GASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLTVSSGG 408
Query: 394 GHSLVIV 400
H++++V
Sbjct: 409 QHTVLLV 415
Score = 147 (56.8 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 55/189 (29%), Positives = 86/189 (45%)
Query: 77 GRCYTWGRNERGQLGHGDKI-QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G T G+ + GQLG G+ + +R +P +V L + +A AG HTV +++ G +FG
Sbjct: 35 GLVLTLGQGDVGQLGLGESVLERKKPALVPLLQD--VVQAEAGGMHTVCLSQSGQVYSFG 92
Query: 136 WNKHGQLGSG-SIR-NEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
N G LG S+ +E+ P V L +V + G T L+ +G L +G
Sbjct: 93 CNDEGALGRDTSVEGSEMVPGKVE-LQEKVVQVSAGDSHTAALTE-DGRVFL------WG 144
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
DN + + L + + +VKVA G +H V + + G +YT
Sbjct: 145 SF---RDN-----NGVIGLLEPMKKSMVPVQVQLDAPVVKVASGNDHLVMLTNDGDLYTL 196
Query: 254 GFGGYGRLG 262
G G G+LG
Sbjct: 197 GCGEQGQLG 205
>DICTYBASE|DDB_G0269934 [details] [associations]
symbol:DDB_G0269934 "Ras GTPase activation
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0051056 "regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0043547 "positive regulation of
GTPase activity" evidence=IEA] [GO:0035023 "regulation of Rho
protein signal transduction" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005096 "GTPase activator activity" evidence=IEA]
[GO:0005089 "Rho guanyl-nucleotide exchange factor activity"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001936
InterPro:IPR008936 Pfam:PF00616 Pfam:PF00621 PROSITE:PS50010
PROSITE:PS50018 SMART:SM00323 dictyBase:DDB_G0269934
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0007165 EMBL:AAFI02000005
GO:GO:0005096 GO:GO:0043547 SUPFAM:SSF48350 GO:GO:0005622
GO:GO:0005089 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 Gene3D:1.10.506.10 eggNOG:COG5261
RefSeq:XP_646416.1 ProteinModelPortal:Q55CR5
EnsemblProtists:DDB0233497 GeneID:8617373 KEGG:ddi:DDB_G0269934
InParanoid:Q55CR5 OMA:SHTEYEN Uniprot:Q55CR5
Length = 2044
Score = 205 (77.2 bits), Expect = 8.5e-13, P = 8.5e-13
Identities = 83/347 (23%), Positives = 148/347 (42%)
Query: 71 VAVDVEGRCYTWGRNERGQLGHGDKIQ-RDRPTIVSELSKYKIK---KAGAGRSHTVVVT 126
+ +D TWG +LG + + +PT L + I +G ++ V+T
Sbjct: 707 IHLDTSRGLMTWGSASNCKLGFKVTAKDQSQPT-PERLPNFNIPDICSISSGSYYSSVLT 765
Query: 127 EDGNSLAFGWNKHGQLGSGSIR----NEIEPS--PVRC-LVSEVTATACGADFTVWLSSV 179
E+G+ + W + G + + ++ +IE P + +S+V + + G F +
Sbjct: 766 ENGD--VYLWGR-GAVKTPAVPILGIPQIEDQLLPFKLESLSDVVSVSIG--FCHGAAVR 820
Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
+L G+ + GQLGHG N Q P+ I +L I +V CG
Sbjct: 821 ANGELLTWGVGENGQLGHGDTNN--------------QIEPKIIQSLTSFWITQVQCGEK 866
Query: 240 HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSC 299
HT+ + G VY+WG YG+LG + P +V ++ NVL I++GS + +
Sbjct: 867 HTICLTKNGKVYSWGASEYGQLGLGDVTQHSSPMQVSALEKYNVLQ----IASGSTHCAV 922
Query: 300 TAGGGQLYMWGKLKNNGDDWMYPKPLM--DLSGWNLRCMDSGNMHHFVGADSSC---ISW 354
++ ++G G + P + L ++ + G H+ A + C +W
Sbjct: 923 LTTSKEVLVFGNGAAMGAASVVSLPTLVPSLKYLHIDRLCCG--HYSTAAITECGDVYTW 980
Query: 355 GHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
G Q ELG+G G + PK ++ L + ++CG H+ + D
Sbjct: 981 GTGQ--ELGHG--GNSTETSPKLIEALRNQSIRQISCGGRHTAFLTD 1023
Score = 185 (70.2 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 45/143 (31%), Positives = 68/143 (47%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P +L L D+ V+ G CH AV G TWG E GQLGHGD + P I+
Sbjct: 797 PFKLESLS--DVVSVSIGF--CHGAAVRANGELLTWGVGENGQLGHGDTNNQIEPKIIQS 852
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTA 165
L+ + I + G HT+ +T++G ++G +++GQLG G + P V L V
Sbjct: 853 LTSFWITQVQCGEKHTICLTKNGKVYSWGASEYGQLGLGDVTQHSSPMQVSALEKYNVLQ 912
Query: 166 TACGADFTVWLSSVEGASILNAG 188
A G+ L++ + + G
Sbjct: 913 IASGSTHCAVLTTSKEVLVFGNG 935
Score = 142 (55.0 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 48/200 (24%), Positives = 82/200 (41%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
SP ++ L ++ +A+G S HC + +G +G + PT+V
Sbjct: 898 SPMQVSALEKYNVLQIASG--STHCAVLTTSKEVLVFGNG--AAMGAASVVSL--PTLVP 951
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VT 164
L I + G T +TE G+ + W +LG G E P + L ++ +
Sbjct: 952 SLKYLHIDRLCCGHYSTAAITECGD--VYTWGTGQELGHGGNSTETSPKLIEALRNQSIR 1009
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
+CG T +L+ + I G +GQLG + + Q +P+ I
Sbjct: 1010 QISCGGRHTAFLT--DSGRIFTCGKDSFGQLGQMSGD---------------QNKPKRIE 1052
Query: 225 ALAGETIVKVACGTNHTVAV 244
+L T + V+CG N+ VA+
Sbjct: 1053 SLTKTTFISVSCGENYNVAL 1072
Score = 129 (50.5 bits), Expect = 0.00019, P = 0.00019
Identities = 41/145 (28%), Positives = 64/145 (44%)
Query: 34 GRRKGALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH 92
G GA ++VS PT + L + I + G S A+ G YTWG + +LGH
Sbjct: 935 GAAMGA--ASVVSLPTLVPSLKYLHIDRLCCGHYST--AAITECGDVYTWGTGQ--ELGH 988
Query: 93 GDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE 152
G P ++ L I++ G HT +T+ G G + GQLG S ++ +
Sbjct: 989 GGNSTETSPKLIEALRNQSIRQISCGGRHTAFLTDSGRIFTCGKDSFGQLGQMS-GDQNK 1047
Query: 153 PSPVRCLVSEV-TATACGADFTVWL 176
P + L + +CG ++ V L
Sbjct: 1048 PKRIESLTKTTFISVSCGENYNVAL 1072
Score = 125 (49.1 bits), Expect = 0.00052, P = 0.00052
Identities = 49/185 (26%), Positives = 79/185 (42%)
Query: 238 TNHTVAV--DSKGYVYTWGFGGYGRLGHR-EQKDEW--VPRRVDVFQRNNVLPPEAVISA 292
T H A+ D+ + TWG +LG + KD+ P R+ F +P IS+
Sbjct: 701 TAHRSAIHLDTSRGLMTWGSASNCKLGFKVTAKDQSQPTPERLPNFN----IPDICSISS 756
Query: 293 GSVNSSCTAGGGQLYMWGK--LKNNG---------DDWMYPKPLMDLSGWNLRCMDSGNM 341
GS SS G +Y+WG+ +K +D + P L LS ++ + G
Sbjct: 757 GSYYSSVLTENGDVYLWGRGAVKTPAVPILGIPQIEDQLLPFKLESLS--DVVSVSIGFC 814
Query: 342 HHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
H V A+ ++WG + G+LG+G + PK + L + V CG H++ +
Sbjct: 815 HGAAVRANGELLTWGVGENGQLGHGDTNNQIE--PKIIQSLTSFWITQVQCGEKHTICLT 872
Query: 401 DRTNV 405
V
Sbjct: 873 KNGKV 877
>RGD|1307187 [details] [associations]
symbol:Nek9 "NIMA-related kinase 9" species:10116 "Rattus
norvegicus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0019901 "protein kinase binding"
evidence=ISO] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 RGD:1307187 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS50012 OMA:GCDGTFL OrthoDB:EOG4NZTSM IPI:IPI00870835
Ensembl:ENSRNOT00000009300 UCSC:RGD:1307187 ArrayExpress:D4A4B2
Uniprot:D4A4B2
Length = 975
Score = 200 (75.5 bits), Expect = 9.2e-13, Sum P(2) = 9.2e-13
Identities = 68/230 (29%), Positives = 101/230 (43%)
Query: 42 GNLVSPTRLRPLV-GVDIRFVAAGCVSCHCVAVDVEGRCYTW-----GRNERGQLGHGDK 95
G +P +L + G R V AG + H V VE YTW G GQLGHGDK
Sbjct: 352 GGKSTPQKLDVIKSGCSARQVCAG--NTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDK 409
Query: 96 IQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNE--IEP 153
+P V +L I + G TV VT++G AFG + +G +G + +EP
Sbjct: 410 ASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEP 469
Query: 154 SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
+ +S V +CG + V L+ + + G +YG+LG ++ +Y T V +
Sbjct: 470 MQLNFFLSNPVEQVSCGDNHVVVLT--RNKEVYSWGCGEYGRLGLDSEEDYYTPQR-VDV 526
Query: 213 AYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
P+A+ IV V CG + T + G V G + +LG
Sbjct: 527 -------PKALI------IVAVQCGCDGTFLLTQSGKVLACGLNEFNKLG 563
Score = 183 (69.5 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 82/312 (26%), Positives = 132/312 (42%)
Query: 117 AGRSHTVVVTEDGN-----SLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGA 170
AG +H VVT + ++ G HGQLG G + +P V L + + +CG
Sbjct: 374 AGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQVSCGD 433
Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
DFTV ++ EG + G YG +G D K S ++ P +
Sbjct: 434 DFTVCVTD-EG-QLYAFGSDYYGCMG--VD-----KVSGPEVL-----EPMQLNFFLSNP 479
Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEA-- 288
+ +V+CG NH V + VY+WG G YGRLG ++D + P+RVDV + ++ +
Sbjct: 480 VEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGC 539
Query: 289 -----VISAGSV-----NSSCTAGGGQLYMWGKLKNNG-DDWMYPKPLM---DLSGWNLR 334
+ +G V N G Q M G + + + Y LS + +R
Sbjct: 540 DGTFLLTQSGKVLACGLNEFNKLGLNQC-MSGIINHEAYHEVPYTTSFTLAKQLSFYKIR 598
Query: 335 CMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGY 393
+ G H + +++G + G+LG G Y +K + L G VI V+CG
Sbjct: 599 TIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNY-KKRLGINLLGGPLGGKQVIRVSCGD 657
Query: 394 GHSLVIVDRTNV 405
++ D ++
Sbjct: 658 EFTIAATDDNHI 669
Score = 173 (66.0 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 83/323 (25%), Positives = 138/323 (42%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L G I V+ G CV D EG+ Y +G + G +G DK+ +
Sbjct: 415 PKHVEKLQGKAIHQVSCGDDFTVCVT-D-EGQLYAFGSDYYGCMGV-DKVSGPEVLEPMQ 471
Query: 107 LSKY---KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV---RCLV 160
L+ + +++ G +H VV+T + ++G ++G+LG S + P V + L+
Sbjct: 472 LNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALI 531
Query: 161 SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
+ A CG D T L+ + +L GL ++ +LG N+ + + + AY P
Sbjct: 532 --IVAVQCGCDGTFLLT--QSGKVLACGLNEFNKLGL---NQCMSGIINHE-AYHEVPYT 583
Query: 221 RAIAA---LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
+ L+ I +A G HT A+D +G + T+G G+LG K +R+ +
Sbjct: 584 TSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYK-----KRLGI 638
Query: 278 FQRNNVLPPEAVI--SAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYP--KPL-MDL-SGW 331
L + VI S G + ++ WG NG M P +P D+ + W
Sbjct: 639 NLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGN-GGNGRLAMTPTERPHGSDICTSW 697
Query: 332 NLRCMDSGNMHHFVGADSSCISW 354
G++HH D SC W
Sbjct: 698 PRPIF--GSLHHV--PDLSCRGW 716
Score = 139 (54.0 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 65/251 (25%), Positives = 101/251 (40%)
Query: 26 GSTCWDAVGRRKGALDG-NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGR 84
GS + +G K + G ++ P +L + + V+ G H V + Y+WG
Sbjct: 449 GSDYYGCMGVDK--VSGPEVLEPMQLNFFLSNPVEQVSCG--DNHVVVLTRNKEVYSWGC 504
Query: 85 NERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG- 143
E G+LG + P V I G T ++T+ G LA G N+ +LG
Sbjct: 505 GEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGL 564
Query: 144 ----SGSIRNEIE---PSPVRCLVSE------VTATACGADFTVWLSSVEGASILNAGLP 190
SG I +E P +++ + A G T + E +L G
Sbjct: 565 NQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAID--ERGRLLTFGCN 622
Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
+ GQLG G N K +L P L G+ +++V+CG T+A ++
Sbjct: 623 KCGQLGVG-----NYKK---RLGINLLGGP-----LGGKQVIRVSCGDEFTIAATDDNHI 669
Query: 251 YTWGFGGYGRL 261
+ WG GG GRL
Sbjct: 670 FAWGNGGNGRL 680
Score = 127 (49.8 bits), Expect = 0.00014, P = 0.00014
Identities = 53/230 (23%), Positives = 97/230 (42%)
Query: 180 EGASILNAGL--PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL-AGETIVKVAC 236
E ++LNA P+ + ++ S V + + P+ + + +G + +V
Sbjct: 315 EKVTLLNAPTKRPRSSTVTEAPIAVVTSRTSEVYVWGGGKSTPQKLDVIKSGCSARQVCA 374
Query: 237 GTNHTVAVDSKGYVYTWGF--GG---YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
G H V + +YTW GG +G+LGH ++ P+ V+ Q + +S
Sbjct: 375 GNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQ----VS 430
Query: 292 AGSVNSSCTAGGGQLYMWGKL--------KNNGDDWMYPKPLMDLSGWNLRCMDSGNMHH 343
G + C GQLY +G K +G + + P L + + G+ H
Sbjct: 431 CGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPMQLNFFLSNPVEQVSCGDNHV 490
Query: 344 FV-GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
V + SWG +YG LG ++ P++VD+ + + +++V CG
Sbjct: 491 VVLTRNKEVYSWGCGEYGRLGLD--SEEDYYTPQRVDVPKALIIVAVQCG 538
Score = 46 (21.3 bits), Expect = 9.2e-13, Sum P(2) = 9.2e-13
Identities = 14/60 (23%), Positives = 29/60 (48%)
Query: 348 DSSCISWGHAQYGELGYGP----YGQK-SSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
D+ +WG+ G L P +G ++ P+ + HV ++C H+++IV++
Sbjct: 666 DNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPI-FGSLHHVPDLSCRGWHTILIVEK 724
Score = 42 (19.8 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 14/39 (35%), Positives = 19/39 (48%)
Query: 302 GGGQLYMWGK-LKNNGDDW-MYPKPLMDLSGWNLRCMDS 338
GG Q+ M + + +D M PKP +D W L DS
Sbjct: 932 GGQQVGMHSRGTQTAKEDMEMDPKPDLDSDSWCLLGTDS 970
>MGI|MGI:2387995 [details] [associations]
symbol:Nek9 "NIMA (never in mitosis gene a)-related
expressed kinase 9" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0016310 "phosphorylation" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0016772 "transferase
activity, transferring phosphorus-containing groups" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 MGI:MGI:2387995
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0019901 GO:GO:0051301 GO:GO:0007067
GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 EMBL:CH466590
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104074 CTD:91754 HOVERGEN:HBG039572
OMA:GCDGTFL OrthoDB:EOG4NZTSM EMBL:AJ489828 EMBL:BC024926
EMBL:BC117971 EMBL:BC117972 IPI:IPI00169806 RefSeq:NP_660120.2
UniGene:Mm.29071 ProteinModelPortal:Q8K1R7 SMR:Q8K1R7
DIP:DIP-56880N IntAct:Q8K1R7 STRING:Q8K1R7 PhosphoSite:Q8K1R7
PaxDb:Q8K1R7 PRIDE:Q8K1R7 Ensembl:ENSMUST00000040992 GeneID:217718
KEGG:mmu:217718 InParanoid:Q148U2 NextBio:375996 Bgee:Q8K1R7
Genevestigator:Q8K1R7 GermOnline:ENSMUSG00000034290 Uniprot:Q8K1R7
Length = 984
Score = 200 (75.5 bits), Expect = 9.5e-13, Sum P(2) = 9.5e-13
Identities = 68/230 (29%), Positives = 101/230 (43%)
Query: 42 GNLVSPTRLRPLV-GVDIRFVAAGCVSCHCVAVDVEGRCYTW-----GRNERGQLGHGDK 95
G +P +L + G R V AG + H V VE YTW G GQLGHGDK
Sbjct: 354 GGKSTPQKLDVIKSGCSARQVCAG--NTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDK 411
Query: 96 IQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNE--IEP 153
+P V +L I + G TV VT++G AFG + +G +G + +EP
Sbjct: 412 ASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEP 471
Query: 154 SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
+ +S V +CG + V L+ + + G +YG+LG ++ +Y T V +
Sbjct: 472 MQLNFFLSNPVEQVSCGDNHVVVLT--RNKEVYSWGCGEYGRLGLDSEEDYYTPQR-VDV 528
Query: 213 AYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
P+A+ IV V CG + T + G V G + +LG
Sbjct: 529 -------PKALI------IVAVQCGCDGTFLLTQSGKVLACGLNEFNKLG 565
Score = 183 (69.5 bits), Expect = 9.5e-11, P = 9.5e-11
Identities = 82/312 (26%), Positives = 132/312 (42%)
Query: 117 AGRSHTVVVTEDGN-----SLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGA 170
AG +H VVT + ++ G HGQLG G + +P V L + + +CG
Sbjct: 376 AGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQVSCGD 435
Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
DFTV ++ EG + G YG +G D K S ++ P +
Sbjct: 436 DFTVCVTD-EG-QLYAFGSDYYGCMG--VD-----KVSGPEVL-----EPMQLNFFLSNP 481
Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEA-- 288
+ +V+CG NH V + VY+WG G YGRLG ++D + P+RVDV + ++ +
Sbjct: 482 VEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGC 541
Query: 289 -----VISAGSV-----NSSCTAGGGQLYMWGKLKNNG-DDWMYPKPLM---DLSGWNLR 334
+ +G V N G Q M G + + + Y LS + +R
Sbjct: 542 DGTFLLTQSGKVLACGLNEFNKLGLNQC-MSGIINHEAYHEVPYTTSFTLAKQLSFYKIR 600
Query: 335 CMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGY 393
+ G H + +++G + G+LG G Y +K + L G VI V+CG
Sbjct: 601 TIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNY-KKRLGINLLGGPLGGKQVIRVSCGD 659
Query: 394 GHSLVIVDRTNV 405
++ D ++
Sbjct: 660 EFTIAATDDNHI 671
Score = 173 (66.0 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 83/323 (25%), Positives = 138/323 (42%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L G I V+ G CV D EG+ Y +G + G +G DK+ +
Sbjct: 417 PKHVEKLQGKAIHQVSCGDDFTVCVT-D-EGQLYAFGSDYYGCMGV-DKVSGPEVLEPMQ 473
Query: 107 LSKY---KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV---RCLV 160
L+ + +++ G +H VV+T + ++G ++G+LG S + P V + L+
Sbjct: 474 LNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALI 533
Query: 161 SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
+ A CG D T L+ + +L GL ++ +LG N+ + + + AY P
Sbjct: 534 --IVAVQCGCDGTFLLT--QSGKVLACGLNEFNKLGL---NQCMSGIINHE-AYHEVPYT 585
Query: 221 RAIAA---LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
+ L+ I +A G HT A+D +G + T+G G+LG K +R+ +
Sbjct: 586 TSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYK-----KRLGI 640
Query: 278 FQRNNVLPPEAVI--SAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYP--KPL-MDL-SGW 331
L + VI S G + ++ WG NG M P +P D+ + W
Sbjct: 641 NLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGN-GGNGRLAMTPTERPHGSDICTSW 699
Query: 332 NLRCMDSGNMHHFVGADSSCISW 354
G++HH D SC W
Sbjct: 700 PRPIF--GSLHHV--PDLSCRGW 718
Score = 139 (54.0 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 65/251 (25%), Positives = 101/251 (40%)
Query: 26 GSTCWDAVGRRKGALDG-NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGR 84
GS + +G K + G ++ P +L + + V+ G H V + Y+WG
Sbjct: 451 GSDYYGCMGVDK--VSGPEVLEPMQLNFFLSNPVEQVSCG--DNHVVVLTRNKEVYSWGC 506
Query: 85 NERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG- 143
E G+LG + P V I G T ++T+ G LA G N+ +LG
Sbjct: 507 GEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGL 566
Query: 144 ----SGSIRNEIE---PSPVRCLVSE------VTATACGADFTVWLSSVEGASILNAGLP 190
SG I +E P +++ + A G T + E +L G
Sbjct: 567 NQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAID--ERGRLLTFGCN 624
Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
+ GQLG G N K +L P L G+ +++V+CG T+A ++
Sbjct: 625 KCGQLGVG-----NYKK---RLGINLLGGP-----LGGKQVIRVSCGDEFTIAATDDNHI 671
Query: 251 YTWGFGGYGRL 261
+ WG GG GRL
Sbjct: 672 FAWGNGGNGRL 682
Score = 127 (49.8 bits), Expect = 0.00014, P = 0.00014
Identities = 53/230 (23%), Positives = 97/230 (42%)
Query: 180 EGASILNAGL--PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL-AGETIVKVAC 236
E ++LNA P+ + ++ S V + + P+ + + +G + +V
Sbjct: 317 EKVTLLNAPTKRPRSSTVTEAPIAVVTSRTSEVYVWGGGKSTPQKLDVIKSGCSARQVCA 376
Query: 237 GTNHTVAVDSKGYVYTWGF--GG---YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
G H V + +YTW GG +G+LGH ++ P+ V+ Q + +S
Sbjct: 377 GNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQ----VS 432
Query: 292 AGSVNSSCTAGGGQLYMWGKL--------KNNGDDWMYPKPLMDLSGWNLRCMDSGNMHH 343
G + C GQLY +G K +G + + P L + + G+ H
Sbjct: 433 CGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPMQLNFFLSNPVEQVSCGDNHV 492
Query: 344 FV-GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
V + SWG +YG LG ++ P++VD+ + + +++V CG
Sbjct: 493 VVLTRNKEVYSWGCGEYGRLGLD--SEEDYYTPQRVDVPKALIIVAVQCG 540
Score = 46 (21.3 bits), Expect = 9.5e-13, Sum P(2) = 9.5e-13
Identities = 14/60 (23%), Positives = 29/60 (48%)
Query: 348 DSSCISWGHAQYGELGYGP----YGQK-SSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
D+ +WG+ G L P +G ++ P+ + HV ++C H+++IV++
Sbjct: 668 DNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPI-FGSLHHVPDLSCRGWHTILIVEK 726
Score = 40 (19.1 bits), Expect = 4.0e-12, Sum P(2) = 4.0e-12
Identities = 13/39 (33%), Positives = 17/39 (43%)
Query: 302 GGGQLYMWGKLKNNGDDWMY--PKPLMDLSGWNLRCMDS 338
GG Q+ M + + M PKP +D W L DS
Sbjct: 941 GGQQVGMHSRGTQTAKEEMEMDPKPDLDSESWCLLGTDS 979
>DICTYBASE|DDB_G0282633 [details] [associations]
symbol:DDB_G0282633 "putative guanine nucleotide
exchange factor (GEF)" species:44689 "Dictyostelium discoideum"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 dictyBase:DDB_G0282633
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AAFI02000047 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
RefSeq:XP_640165.2 ProteinModelPortal:Q54S74
EnsemblProtists:DDB0234270 GeneID:8623703 KEGG:ddi:DDB_G0282633
OMA:RLAYLCN ProtClustDB:CLSZ2501699 Uniprot:Q54S74
Length = 919
Score = 201 (75.8 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 66/240 (27%), Positives = 103/240 (42%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y+ G G+ GH K PT + ELS +IK G H++ + + G ++G
Sbjct: 213 GAVYSSGLCSYGKTGHKKKRDVLIPTQILELSNKRIKSIACGTHHSLAMDDLGQVYSWGN 272
Query: 137 NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
G+LG G N+ P L+S + T + + + IL + Y G
Sbjct: 273 GASGRLGLG---NDFSIVPTPTLISVINRFGSNEIATAIAAGCDNSMILGSNGDVYS-FG 328
Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
+ K+ L + Q P+ I ++ + +AC + H+V +D KG VYT G
Sbjct: 329 SNLHYKLGYKECDGALGF--QSTPKKIPSIL--QMKSIACASWHSVFLDLKGRVYTCGSS 384
Query: 257 GYGRLGHR-EQKDEWVPRRVDVF--QRNNVLPPEAVI---SAGSVNSSCTAGGGQLYMWG 310
GRLG + P RV + + N LP E VI + G+ ++ + G LY WG
Sbjct: 385 TNGRLGRAISSYSSFYPERVSITNSKTNGTLPQEEVIKQIACGTNFTTVLSESGSLYSWG 444
Score = 198 (74.8 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 58/230 (25%), Positives = 115/230 (50%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR-DRP 101
+++ PT++ L I+ +A G + H +A+D G+ Y+WG G+LG G+ P
Sbjct: 233 DVLIPTQILELSNKRIKSIACG--THHSLAMDDLGQVYSWGNGASGRLGLGNDFSIVPTP 290
Query: 102 TIVSELSKY---KIKKA-GAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRNEIEP 153
T++S ++++ +I A AG +++++ +G+ +FG N H +LG G++ + P
Sbjct: 291 TLISVINRFGSNEIATAIAAGCDNSMILGSNGDVYSFGSNLHYKLGYKECDGALGFQSTP 350
Query: 154 SPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
+ ++ ++ + AC + +V+L ++G + G G+LG + + V +
Sbjct: 351 KKIPSIL-QMKSIACASWHSVFLD-LKGR-VYTCGSSTNGRLGRAISSYSSFYPERVSIT 407
Query: 214 YEAQPRPRAIAALAGETIVK-VACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
+ L E ++K +ACGTN T + G +Y+WG +LG
Sbjct: 408 -----NSKTNGTLPQEEVIKQIACGTNFTTVLSESGSLYSWGVNTKSQLG 452
Score = 148 (57.2 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 55/194 (28%), Positives = 89/194 (45%)
Query: 122 TVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTA---TACGADFTVWLS 177
T ++T + S+ + W GQ+ + S+ + L + E++A T G ++ + L+
Sbjct: 155 TSMMTMEQTSI-YQW---GQILTSSLTLKSCAKATNMLFNDEISAPIQTEFGQNYNLILT 210
Query: 178 SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
GA + ++GL YG+ GH K V + P I L+ + I +ACG
Sbjct: 211 DT-GA-VYSSGLCSYGKTGH-------KKKRDVLI-------PTQILELSNKRIKSIACG 254
Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLG-HREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVN 296
T+H++A+D G VY+WG G GRLG + P + V R I+AG N
Sbjct: 255 THHSLAMDDLGQVYSWGNGASGRLGLGNDFSIVPTPTLISVINRFGSNEIATAIAAGCDN 314
Query: 297 SSCTAGGGQLYMWG 310
S G +Y +G
Sbjct: 315 SMILGSNGDVYSFG 328
Score = 43 (20.2 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 18/68 (26%), Positives = 26/68 (38%)
Query: 340 NMHHFVGADSSCISWGHAQYGELGY-GPYG-QKSSAMPKKVDILEGMHVISVACGYGHSL 397
N + S SWG +LG G + + PK V L + S A G H +
Sbjct: 429 NFTTVLSESGSLYSWGVNTKSQLGLINLVGISEYYSQPKLVTALNPYTIHSFAVGDQHVV 488
Query: 398 VIVDRTNV 405
+ D+ V
Sbjct: 489 ALSDQGEV 496
>UNIPROTKB|Q7ZZC8 [details] [associations]
symbol:nek9 "Serine/threonine-protein kinase Nek9"
species:8355 "Xenopus laevis" [GO:0019901 "protein kinase binding"
evidence=ISS] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 GO:GO:0005737 GO:GO:0019901
GO:GO:0051301 GO:GO:0007067 GO:GO:0046872 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
HOVERGEN:HBG039572 EMBL:AY271412 UniGene:Xl.77246
ProteinModelPortal:Q7ZZC8 Xenbase:XB-GENE-974105 Uniprot:Q7ZZC8
Length = 944
Score = 199 (75.1 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 87/307 (28%), Positives = 134/307 (43%)
Query: 110 YKIKKAGAGRSHTVVVTEDGNSLAF----GWNK-HGQLGSGSIRNEIEPSPVRCLVSE-V 163
++ ++ AG +H VVT + + G +K HGQLG G + +P V L + V
Sbjct: 351 WRARQVCAGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHGDRASYRQPKHVEKLQGKSV 410
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
+CG+DFTV ++ EG + + G YG LG N S L P +
Sbjct: 411 QKVSCGSDFTVCITD-EG-QLYSFGSDYYGCLG------VNQSAGSEVL------EPLLV 456
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN-- 281
E + +V+CG +H +A+ VY+WG G YGRLG + D + P++V+V QR
Sbjct: 457 DFFLNEPVDQVSCGDSHIMALTRSKSVYSWGCGEYGRLGLDSEDDVYSPQKVEV-QRGLC 515
Query: 282 --NV---------LPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNG-DDWMYPKPLM--- 326
NV L + A +N G Q Y G + + + Y L
Sbjct: 516 IVNVCCGSDGSFLLTLTGKVLACGLNEHNKLGLNQ-YTAGIINHEAFQEVPYTTSLTLAK 574
Query: 327 DLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMH 385
LS + +R + G H + +++G + G+LG G Y +K + L G
Sbjct: 575 QLSFYKIRSISPGRTHTAAIDERGRLLTFGSNKCGQLGVGDY-RKHLGINLLGGPLGGKQ 633
Query: 386 VISVACG 392
VI V+CG
Sbjct: 634 VIRVSCG 640
Score = 193 (73.0 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 69/230 (30%), Positives = 103/230 (44%)
Query: 42 GNLVSPTRLRPLVGV-DIRFVAAGCVSCHCVAVDVEGRCYTW-----GRNERGQLGHGDK 95
G +P +L G R V AG H V VE YTW G GQLGHGD+
Sbjct: 336 GGKTTPQKLDVFKGGWRARQVCAG--DAHFAVVTVEKELYTWVNMQGGSKLHGQLGHGDR 393
Query: 96 IQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEI-EP 153
+P V +L ++K G TV +T++G +FG + +G LG + S +E+ EP
Sbjct: 394 ASYRQPKHVEKLQGKSVQKVSCGSDFTVCITDEGQLYSFGSDYYGCLGVNQSAGSEVLEP 453
Query: 154 SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
V ++E V +CG + L+ S+ + G +YG+LG D+E D
Sbjct: 454 LLVDFFLNEPVDQVSCGDSHIMALT--RSKSVYSWGCGEYGRLG--LDSE----DD---- 501
Query: 213 AYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
Y P+ + G IV V CG++ + + G V G + +LG
Sbjct: 502 VYS----PQKVEVQRGLCIVNVCCGSDGSFLLTLTGKVLACGLNEHNKLG 547
Score = 138 (53.6 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 48/201 (23%), Positives = 76/201 (37%)
Query: 65 CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVV 124
C H +A+ Y+WG E G+LG + P V I G + +
Sbjct: 469 CGDSHIMALTRSKSVYSWGCGEYGRLGLDSEDDVYSPQKVEVQRGLCIVNVCCGSDGSFL 528
Query: 125 VTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVW-LSSVEGAS 183
+T G LA G N+H +LG I V T+ + + + S+
Sbjct: 529 LTLTGKVLACGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLSFYKIRSISPGR 588
Query: 184 ILNAGLPQYGQL---GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
A + + G+L G + D L P L G+ +++V+CG
Sbjct: 589 THTAAIDERGRLLTFGSNKCGQLGVGDYRKHLGINLLGGP-----LGGKQVIRVSCGDEF 643
Query: 241 TVAVDSKGYVYTWGFGGYGRL 261
T A + +++ WG GG GRL
Sbjct: 644 TTAATADNHIFAWGNGGNGRL 664
Score = 138 (53.6 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 61/238 (25%), Positives = 100/238 (42%)
Query: 180 EGASILNAG--LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC- 236
E S+LN P+ G + ++ S V + + P+ + G + C
Sbjct: 299 EKVSMLNRSNKKPRTGTVTEAPIAVVTSRSSEVYVWGGGKTTPQKLDVFKGGWRARQVCA 358
Query: 237 GTNHTVAVDSKGYVYTWGF--GG---YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
G H V + +YTW GG +G+LGH ++ P+ V+ Q +V +S
Sbjct: 359 GDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHGDRASYRQPKHVEKLQGKSVQK----VS 414
Query: 292 AGSVNSSCTAGGGQLYMWGK-----LKNN---GDDWMYPKPLMDLS-GWNLRCMDSGNMH 342
GS + C GQLY +G L N G + + P L+D + + G+ H
Sbjct: 415 CGSDFTVCITDEGQLYSFGSDYYGCLGVNQSAGSEVLEPL-LVDFFLNEPVDQVSCGDSH 473
Query: 343 HFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
S + SWG +YG LG S P+KV++ G+ +++V CG S ++
Sbjct: 474 IMALTRSKSVYSWGCGEYGRLGLDSEDDVYS--PQKVEVQRGLCIVNVCCGSDGSFLL 529
Score = 129 (50.5 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 44/148 (29%), Positives = 69/148 (46%)
Query: 102 TIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS 161
T+ +LS YKI+ GR+HT + E G L FG NK GQLG G R + + + +
Sbjct: 571 TLAKQLSFYKIRSISPGRTHTAAIDERGRLLTFGSNKCGQLGVGDYRKHLGINLLGGPLG 630
Query: 162 --EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
+V +CG +FT ++ I G G+L T NE + S + ++ PR
Sbjct: 631 GKQVIRVSCGDEFTT--AATADNHIFAWGNGGNGRLAM-TPNE-RPQGSDICTSW---PR 683
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSK 247
P +L + ++C HT+ + K
Sbjct: 684 P-IFGSL--HHVTDLSCRGWHTILIVEK 708
Score = 49 (22.3 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 14/61 (22%), Positives = 29/61 (47%)
Query: 347 ADSSCISWGHAQYGELGYGPYGQKS-----SAMPKKVDILEGMHVISVACGYGHSLVIVD 401
AD+ +WG+ G L P + ++ P+ + HV ++C H+++IV+
Sbjct: 649 ADNHIFAWGNGGNGRLAMTPNERPQGSDICTSWPRPI-FGSLHHVTDLSCRGWHTILIVE 707
Query: 402 R 402
+
Sbjct: 708 K 708
Score = 39 (18.8 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 18/79 (22%), Positives = 33/79 (41%)
Query: 290 ISAGSVNSSCTAGGGQLYMWGKLKNNGD-DWMYPKPLMDLSGWNLRCMDSGNMHHFVGAD 348
+S G++ SC++GG G + + D + + P G ++G + +
Sbjct: 722 LSIGTLAQSCSSGGS-----GSREEDSDRESLTSDPSRGFRGTIEAEPETGPFNTTENME 776
Query: 349 SS-CISWGHAQYGELGYGP 366
SS C SW + E + P
Sbjct: 777 SSSCPSWLRQELEEAEFIP 795
>UNIPROTKB|F1NAG9 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GeneTree:ENSGT00700000104074
OMA:GCDGTFL EMBL:AADN02003466 IPI:IPI00598995
Ensembl:ENSGALT00000016792 Uniprot:F1NAG9
Length = 984
Score = 199 (75.1 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 80/311 (25%), Positives = 128/311 (41%)
Query: 117 AGRSHTVVVTEDGN-----SLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGA 170
AG +H VVT + ++ G HGQLG G + +P V L + + +CG
Sbjct: 386 AGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDRASYRQPKHVEKLQGKAIRQVSCGD 445
Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
DFTV ++ EG + G YG +G D Y ++ E P +
Sbjct: 446 DFTVCITD-EG-QLYAFGSDYYGCIG--IDKAYGSE------VLE----PLQLDFFLTNP 491
Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP---- 286
+ +V+CG NH + VYTWG G YGRLG ++D + P++VDV + N++
Sbjct: 492 VEQVSCGDNHVAVLTRNREVYTWGCGEYGRLGLDSEEDHYTPQKVDVPKTLNIVSVHCGC 551
Query: 287 EAVISAGSVNSSCTAGGGQLYMWGKLKN-----NGDDWM---YPKPLM---DLSGWNLRC 335
+ G + G + N D + Y L LS + +R
Sbjct: 552 DGTFLLTQTGKVLACGLNEFNKLGLNQCTSGIINHDTYCEVPYATSLTLAKQLSFYKIRT 611
Query: 336 MDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYG 394
+ G H + +++G + G+LG G Y +K + L G VI V+CG
Sbjct: 612 ISPGKTHTASIDERGRLLTFGSNKCGQLGVGDY-KKHLGINLLAGPLGGKQVIRVSCGDE 670
Query: 395 HSLVIVDRTNV 405
++ D ++
Sbjct: 671 FTIAATDDNHI 681
Score = 186 (70.5 bits), Expect = 4.4e-11, P = 4.4e-11
Identities = 96/395 (24%), Positives = 161/395 (40%)
Query: 42 GNLVSPTRLRPLV-GVDIRFVAAGCVSCHCVAVDVEGRCYTW-----GRNERGQLGHGDK 95
G +P +L + G R V AG + H V VE YTW G GQLGHGD+
Sbjct: 364 GGKSTPQKLDAIKSGCSARQVCAG--NTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDR 421
Query: 96 IQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEI-EP 153
+P V +L I++ G TV +T++G AFG + +G +G + +E+ EP
Sbjct: 422 ASYRQPKHVEKLQGKAIRQVSCGDDFTVCITDEGQLYAFGSDYYGCIGIDKAYGSEVLEP 481
Query: 154 SPVRC-LVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
+ L + V +CG + L+ + G +YG+LG ++ ++ T V +
Sbjct: 482 LQLDFFLTNPVEQVSCGDNHVAVLT--RNREVYTWGCGEYGRLGLDSEEDHYTPQK-VDV 538
Query: 213 AYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHRE------Q 266
P+ + IV V CG + T + G V G + +LG +
Sbjct: 539 -------PKTL------NIVSVHCGCDGTFLLTQTGKVLACGLNEFNKLGLNQCTSGIIN 585
Query: 267 KDEW--VPRRVDVFQRNNV-LPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDW 319
D + VP + + IS G +++ G+L +G K GD
Sbjct: 586 HDTYCEVPYATSLTLAKQLSFYKIRTISPGKTHTASIDERGRLLTFGSNKCGQLGVGD-- 643
Query: 320 MYPKPLM------DLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP----YG 368
Y K L L G + + G+ D + I +WG+ G L P +G
Sbjct: 644 -YKKHLGINLLAGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERAHG 702
Query: 369 QK-SSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
++ P+ + HV ++C H++++V++
Sbjct: 703 SDICTSWPRPI-FGSLHHVPDLSCRGWHTIIVVEK 736
>UNIPROTKB|F1S2Q4 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS50012 GeneTree:ENSGT00700000104074 OMA:GCDGTFL
EMBL:CT737372 Ensembl:ENSSSCT00000002648 Uniprot:F1S2Q4
Length = 1004
Score = 198 (74.8 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 67/230 (29%), Positives = 101/230 (43%)
Query: 42 GNLVSPTRLRPLV-GVDIRFVAAGCVSCHCVAVDVEGRCYTW-----GRNERGQLGHGDK 95
G +P +L + G R V AG + H V VE YTW G GQLGHGDK
Sbjct: 373 GGKSTPQKLDVIKSGCSARQVCAG--NTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDK 430
Query: 96 IQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNE--IEP 153
+P V +L I++ G TV VT++G AFG + +G +G + +EP
Sbjct: 431 ASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEP 490
Query: 154 SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
+ + V +CG + V L+ + + G +YG+LG ++ +Y T V +
Sbjct: 491 MQLNFFSNNPVEQVSCGDNHVVVLT--RNKEVYSWGCGEYGRLGLDSEEDYYTPQK-VDV 547
Query: 213 AYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
P+A+ IV V CG + T + G V G + +LG
Sbjct: 548 -------PKALI------IVAVQCGCDGTFLLTQSGKVLACGLNEFNKLG 584
Score = 185 (70.2 bits), Expect = 5.9e-11, P = 5.9e-11
Identities = 81/312 (25%), Positives = 132/312 (42%)
Query: 117 AGRSHTVVVTEDGN-----SLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGA 170
AG +H VVT + ++ G HGQLG G + +P V L + + +CG
Sbjct: 395 AGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGD 454
Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
DFTV ++ EG + G YG +G D K+A P + +
Sbjct: 455 DFTVCVTD-EG-QLYAFGSDYYGCMG--VD----------KVAGPEVLEPMQLNFFSNNP 500
Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEA-- 288
+ +V+CG NH V + VY+WG G YGRLG ++D + P++VDV + ++ +
Sbjct: 501 VEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGC 560
Query: 289 -----VISAGSV-----NSSCTAGGGQLYMWGKLKNNG-DDWMYPKPLM---DLSGWNLR 334
+ +G V N G Q M G + + + Y LS + +R
Sbjct: 561 DGTFLLTQSGKVLACGLNEFNKLGLNQC-MSGIINHEAYHEVPYTTSFTLAKQLSFYKIR 619
Query: 335 CMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGY 393
+ G H + +++G + G+LG G Y +K + L G VI V+CG
Sbjct: 620 TVAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNY-KKRLGINLLGGPLGGKQVIRVSCGD 678
Query: 394 GHSLVIVDRTNV 405
++ D ++
Sbjct: 679 EFTIAATDDNHI 690
Score = 185 (70.2 bits), Expect = 5.9e-11, P = 5.9e-11
Identities = 86/323 (26%), Positives = 139/323 (43%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR---PTI 103
P + L G IR V+ G CV D EG+ Y +G + G +G DK+ P
Sbjct: 436 PKHVEKLQGKAIRQVSCGDDFTVCVT-D-EGQLYAFGSDYYGCMGV-DKVAGPEVLEPMQ 492
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV---RCLV 160
++ S +++ G +H VV+T + ++G ++G+LG S + P V + L+
Sbjct: 493 LNFFSNNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALI 552
Query: 161 SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
+ A CG D T L+ + +L GL ++ +LG N+ + + + AY P
Sbjct: 553 --IVAVQCGCDGTFLLT--QSGKVLACGLNEFNKLGL---NQCMSGIINHE-AYHEVPYT 604
Query: 221 RAIAA---LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
+ L+ I VA G HT A+D +G + T+G G+LG K +R+ +
Sbjct: 605 TSFTLAKQLSFYKIRTVAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYK-----KRLGI 659
Query: 278 FQRNNVLPPEAVI--SAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYP--KPL-MDL-SGW 331
L + VI S G + ++ WG NG M P +P D+ + W
Sbjct: 660 NLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGN-GGNGRLAMTPTERPHGSDICTSW 718
Query: 332 NLRCMDSGNMHHFVGADSSCISW 354
G++HH D SC W
Sbjct: 719 PRPIF--GSLHHV--PDLSCRGW 737
Score = 133 (51.9 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 46/174 (26%), Positives = 75/174 (43%)
Query: 233 KVACGTNHTVAVDSKGYVYTWGF--GG---YGRLGHREQKDEWVPRRVDVFQRNNVLPPE 287
+V G H V + +YTW GG +G+LGH ++ P+ V+ Q +
Sbjct: 392 QVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQ-- 449
Query: 288 AVISAGSVNSSCTAGGGQLYMWGKL--------KNNGDDWMYPKPLMDLSGWNLRCMDSG 339
+S G + C GQLY +G K G + + P L S + + G
Sbjct: 450 --VSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFFSNNPVEQVSCG 507
Query: 340 NMHHFV-GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
+ H V + SWG +YG LG ++ P+KVD+ + + +++V CG
Sbjct: 508 DNHVVVLTRNKEVYSWGCGEYGRLGLD--SEEDYYTPQKVDVPKALIIVAVQCG 559
Score = 46 (21.3 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 14/60 (23%), Positives = 29/60 (48%)
Query: 348 DSSCISWGHAQYGELGYGP----YGQK-SSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
D+ +WG+ G L P +G ++ P+ + HV ++C H+++IV++
Sbjct: 687 DNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPI-FGSLHHVPDLSCRGWHTILIVEK 745
Score = 43 (20.2 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 14/39 (35%), Positives = 17/39 (43%)
Query: 302 GGGQLYMWGKLKNNGDDWMY--PKPLMDLSGWNLRCMDS 338
GG Q+ M K + M PKP +D W L DS
Sbjct: 961 GGQQVGMHSKGTQTAKEEMEMDPKPDLDSDSWCLLGTDS 999
>UNIPROTKB|P23800 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:10036 "Mesocricetus auratus" [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0007059
"chromosome segregation" evidence=ISS] [GO:0031492 "nucleosomal DNA
binding" evidence=ISS] [GO:0051225 "spindle assembly" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0007059 GO:GO:0051301 GO:GO:0007067 GO:GO:0051225
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0031492 HOVERGEN:HBG017712 EMBL:M33579 PIR:A34726
ProteinModelPortal:P23800 SMR:P23800 Uniprot:P23800
Length = 421
Score = 192 (72.6 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 89/367 (24%), Positives = 154/367 (41%)
Query: 50 LRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR--PTIVSEL 107
L PL+ D+ AG H V ++ G+ Y++G N+ G LG ++ P V EL
Sbjct: 62 LVPLLQ-DVVQAEAG--GMHTVCLNQSGQVYSFGCNDEGALGRDTSVEGSEMVPGKV-EL 117
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGW--NKHGQLGS-GSIRNEIEPSPVRCLVSEVT 164
+ K+ + AG SHT +TEDG +G + +G +G ++ + P V+ L V
Sbjct: 118 QE-KVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQ-LDMPVV 175
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
A G D V L++ +G + G + GQLG + + L P+ +
Sbjct: 176 KVASGNDHLVMLTT-DG-DLYTLGCGEQGQLGR-VPELFANRGGRQGLERLLVPKCVLLK 232
Query: 225 ALAGETIVKVA---CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
+ V+ CG T A+ +G+VY +G Y +LG ++P+ + F+
Sbjct: 233 SRGSRGRVRFQDAFCGAYLTFAISREGHVYGFGLSNYHQLGTPGTASCFIPQNLTSFK-- 290
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLSGWN-L 333
N S G ++ C G+ Y G+ L ++ P + L + +
Sbjct: 291 NSTKSWVGFSGGQHHTICMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPVVSSV 350
Query: 334 RCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGY 393
C ++ + V D +WG +LG G S + LE V++V+ G
Sbjct: 351 AC--GASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLTVSSGG 408
Query: 394 GHSLVIV 400
H++++V
Sbjct: 409 QHTVLLV 415
Score = 145 (56.1 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 55/189 (29%), Positives = 85/189 (44%)
Query: 77 GRCYTWGRNERGQLGHGDKI-QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G T G+ + GQLG G+ + +R +P +V L + +A AG HTV + + G +FG
Sbjct: 35 GLVLTLGQGDVGQLGLGESVLERKKPALVPLLQD--VVQAEAGGMHTVCLNQSGQVYSFG 92
Query: 136 WNKHGQLGSG-SIR-NEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
N G LG S+ +E+ P V L +V + G T L+ +G L +G
Sbjct: 93 CNDEGALGRDTSVEGSEMVPGKVE-LQEKVVQVSAGDSHTAALTE-DGRVFL------WG 144
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
DN + + L + + +VKVA G +H V + + G +YT
Sbjct: 145 SF---RDN-----NGVIGLLEPMKKSMVPVQVQLDMPVVKVASGNDHLVMLTTDGDLYTL 196
Query: 254 GFGGYGRLG 262
G G G+LG
Sbjct: 197 GCGEQGQLG 205
>UNIPROTKB|J9NZT9 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 EMBL:AAEX03016754 EMBL:AAEX03016753
Ensembl:ENSCAFT00000045241 Uniprot:J9NZT9
Length = 865
Score = 196 (74.1 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 62/178 (34%), Positives = 83/178 (46%)
Query: 76 EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
EG + WG N GQLG D+ R+ P V L K+ G HT V+T+ G FG
Sbjct: 23 EGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFG 82
Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNA-GLPQYG 193
GQLG S+ +E+ P V L+ SEVT ACG T L+ V + ++ A G G
Sbjct: 83 AGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHT--LAFVPSSGLIYAFGCGAKG 140
Query: 194 QLGHGTDNEYNTK-DSSVK---LAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
QLG G + N K S VK A+ Q RA + ++ G + T + SK
Sbjct: 141 QLGTG--HTCNVKCPSPVKGYWAAHSGQLSARA-DRFKYHIVKQIFSGGDQTFVLCSK 195
Score = 163 (62.4 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 47/152 (30%), Positives = 69/152 (45%)
Query: 115 AGAGRSHTVVVTEDGNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGAD 171
AG+G+ + ++ FGW N GQLG + P V+ L +V +CG +
Sbjct: 9 AGSGKG-IPLPSQPAEGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEE 67
Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
T L+ G AG GQLGH + N+ + PR + L G +
Sbjct: 68 HTAVLTKSGGVFTFGAG--SCGQLGHDSMND--------------EVNPRRVLELMGSEV 111
Query: 232 VKVACGTNHTVA-VDSKGYVYTWGFGGYGRLG 262
++ACG HT+A V S G +Y +G G G+LG
Sbjct: 112 TQIACGRQHTLAFVPSSGLIYAFGCGAKGQLG 143
Score = 131 (51.2 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 34/100 (34%), Positives = 44/100 (44%)
Query: 59 RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAG 118
+ V C H + G +T+G GQLGH P V EL ++ + G
Sbjct: 58 KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACG 117
Query: 119 RSHTVV-VTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
R HT+ V G AFG GQLG+G N PSPV+
Sbjct: 118 RQHTLAFVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVK 157
>UNIPROTKB|F1MM88 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS50012 GeneTree:ENSGT00700000104074 OMA:GCDGTFL
EMBL:DAAA02029619 IPI:IPI00714098 Ensembl:ENSBTAT00000022098
Uniprot:F1MM88
Length = 994
Score = 202 (76.2 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 68/230 (29%), Positives = 102/230 (44%)
Query: 42 GNLVSPTRLRPLV-GVDIRFVAAGCVSCHCVAVDVEGRCYTW-----GRNERGQLGHGDK 95
G +P +L + G R V AG + H V VE YTW G GQLGHGDK
Sbjct: 371 GGKSTPQKLDVIKSGCSARQVCAG--NTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDK 428
Query: 96 IQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNE--IEP 153
+P V +L I++ G TV VT++G AFG + +G +G + +EP
Sbjct: 429 ASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGAEVLEP 488
Query: 154 SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
+ +S V +CG + V L+ + + G +YG+LG ++ +Y T V +
Sbjct: 489 MQLDFFLSNPVEQVSCGDNHVVVLT--RNKEVYSWGCGEYGRLGLDSEEDYYTPQK-VDV 545
Query: 213 AYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
P+A+ IV V CG + T + G V G + +LG
Sbjct: 546 -------PKALI------IVAVQCGCDGTFLLTQSGKVLACGLNEFNKLG 582
Score = 181 (68.8 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 81/312 (25%), Positives = 131/312 (41%)
Query: 117 AGRSHTVVVTEDGN-----SLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGA 170
AG +H VVT + ++ G HGQLG G + +P V L + + +CG
Sbjct: 393 AGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGD 452
Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
DFTV ++ EG + G YG +G D K+A P +
Sbjct: 453 DFTVCVTD-EG-QLYAFGSDYYGCMG--VD----------KVAGAEVLEPMQLDFFLSNP 498
Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEA-- 288
+ +V+CG NH V + VY+WG G YGRLG ++D + P++VDV + ++ +
Sbjct: 499 VEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGC 558
Query: 289 -----VISAGSV-----NSSCTAGGGQLYMWGKLKNNG-DDWMYPKPLM---DLSGWNLR 334
+ +G V N G Q M G + + + Y LS + +R
Sbjct: 559 DGTFLLTQSGKVLACGLNEFNKLGLNQC-MSGIINHEAYHEVPYTTSFTLAKQLSFYKIR 617
Query: 335 CMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGY 393
+ G H + +++G + G+LG G Y +K + L G VI V+CG
Sbjct: 618 TIAPGKTHTAALDERGRLLTFGCNKCGQLGVGNY-KKRLGINLLGGPLGGKQVIRVSCGD 676
Query: 394 GHSLVIVDRTNV 405
++ D ++
Sbjct: 677 EFTIAATDDNHI 688
Score = 174 (66.3 bits), Expect = 9.6e-10, P = 9.6e-10
Identities = 84/323 (26%), Positives = 138/323 (42%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P + L G IR V+ G CV D EG+ Y +G + G +G DK+ +
Sbjct: 434 PKHVEKLQGKAIRQVSCGDDFTVCVT-D-EGQLYAFGSDYYGCMGV-DKVAGAEVLEPMQ 490
Query: 107 LSKY---KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV---RCLV 160
L + +++ G +H VV+T + ++G ++G+LG S + P V + L+
Sbjct: 491 LDFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALI 550
Query: 161 SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
+ A CG D T L+ + +L GL ++ +LG N+ + + + AY P
Sbjct: 551 --IVAVQCGCDGTFLLT--QSGKVLACGLNEFNKLGL---NQCMSGIINHE-AYHEVPYT 602
Query: 221 RAIAA---LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
+ L+ I +A G HT A+D +G + T+G G+LG K +R+ +
Sbjct: 603 TSFTLAKQLSFYKIRTIAPGKTHTAALDERGRLLTFGCNKCGQLGVGNYK-----KRLGI 657
Query: 278 FQRNNVLPPEAVI--SAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYP--KPL-MDL-SGW 331
L + VI S G + ++ WG NG M P +P D+ + W
Sbjct: 658 NLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGN-GGNGRLAMTPTERPHGSDICTSW 716
Query: 332 NLRCMDSGNMHHFVGADSSCISW 354
G++HH D SC W
Sbjct: 717 PRPIF--GSLHHV--PDLSCRGW 735
Score = 143 (55.4 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 66/250 (26%), Positives = 100/250 (40%)
Query: 26 GSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRN 85
GS + +G K A ++ P +L + + V+ G H V + Y+WG
Sbjct: 468 GSDYYGCMGVDKVA-GAEVLEPMQLDFFLSNPVEQVSCG--DNHVVVLTRNKEVYSWGCG 524
Query: 86 ERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-- 143
E G+LG + P V I G T ++T+ G LA G N+ +LG
Sbjct: 525 EYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLN 584
Query: 144 ---SGSIRNEIE---PSPVRCLVSE------VTATACGADFTVWLSSVEGASILNAGLPQ 191
SG I +E P +++ + A G T L E +L G +
Sbjct: 585 QCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAALD--ERGRLLTFGCNK 642
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
GQLG G N K +L P L G+ +++V+CG T+A +++
Sbjct: 643 CGQLGVG-----NYKK---RLGINLLGGP-----LGGKQVIRVSCGDEFTIAATDDNHIF 689
Query: 252 TWGFGGYGRL 261
WG GG GRL
Sbjct: 690 AWGNGGNGRL 699
Score = 126 (49.4 bits), Expect = 0.00018, P = 0.00018
Identities = 54/230 (23%), Positives = 96/230 (41%)
Query: 180 EGASILNAGL--PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL-AGETIVKVAC 236
E ++LNA P+ + ++ S V + + P+ + + +G + +V
Sbjct: 334 EKVTLLNAPTKRPRSSTVTEAPIAVVTSRTSEVYVWGGGKSTPQKLDVIKSGCSARQVCA 393
Query: 237 GTNHTVAVDSKGYVYTWGF--GG---YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
G H V + +YTW GG +G+LGH ++ P+ V+ Q + +S
Sbjct: 394 GNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQ----VS 449
Query: 292 AGSVNSSCTAGGGQLYMWGKL--------KNNGDDWMYPKPLMDLSGWNLRCMDSGNMHH 343
G + C GQLY +G K G + + P L + + G+ H
Sbjct: 450 CGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGAEVLEPMQLDFFLSNPVEQVSCGDNHV 509
Query: 344 FV-GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
V + SWG +YG LG ++ P+KVD+ + + +++V CG
Sbjct: 510 VVLTRNKEVYSWGCGEYGRLGLD--SEEDYYTPQKVDVPKALIIVAVQCG 557
Score = 39 (18.8 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 13/60 (21%), Positives = 29/60 (48%)
Query: 348 DSSCISWGHAQYGELGYGP----YGQK-SSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
D+ +WG+ G L P +G ++ P+ + HV ++C ++++IV++
Sbjct: 685 DNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPI-FGSLHHVPDLSCRGWNTILIVEK 743
Score = 38 (18.4 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 13/39 (33%), Positives = 16/39 (41%)
Query: 302 GGGQLYMWGKLKNNGDDWMY--PKPLMDLSGWNLRCMDS 338
GG Q+ M K D P+P +D W L DS
Sbjct: 951 GGQQVGMHSKGTQTAKDETETDPRPDLDSDSWCLLGTDS 989
>UNIPROTKB|H0YEL8 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860
EMBL:AC124058 EMBL:AC124078 Ensembl:ENST00000529151 Uniprot:H0YEL8
Length = 299
Score = 182 (69.1 bits), Expect = 8.7e-12, P = 8.7e-12
Identities = 65/255 (25%), Positives = 107/255 (41%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERG---QLGHGDKIQ----RDRPTIVSELSKYKIK 113
+AAG H VA G + WG +L G + P+ V+ L K
Sbjct: 22 IAAGLR--HAVAATASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAM 79
Query: 114 KAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR--CLVSEVTATACGAD 171
AG H+ +T+ G +G NKHGQL + + + P + C +E TA +
Sbjct: 80 CVLAGSDHSASLTDAGEVYVWGSNKHGQLANEAAFLPV-PQKIEAHCFQNE-KVTAIWSG 137
Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDN----EYNTKDSSVKLAYEAQPRPRAIAALA 227
+T ++ E + G YGQLG + + +DS + + P + L
Sbjct: 138 WTHLVAQTETGKMFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSRPPNSMPSSPHCLT 197
Query: 228 GETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE 287
G T +V+CG+ H +A+ G Y+WG+ +G G + + W P+ P +
Sbjct: 198 GAT--EVSCGSEHNLAIIG-GVCYSWGWNEHGMCGDGTEANVWAPK-----------PVQ 243
Query: 288 AVISAGSVNSSCTAG 302
A++S+ + C AG
Sbjct: 244 ALLSSSGLLVGCGAG 258
Score = 122 (48.0 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 38/125 (30%), Positives = 56/125 (44%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGH------GDKIQRD-------RPTIVSELSKYKIKKA 115
H VA G+ +TWGR + GQLG G K+++ RP S + + A
Sbjct: 140 HLVAQTETGKMFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSRPPNSMPSSPHCLTGA 199
Query: 116 ---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEV-TATACGAD 171
G H + + G ++GWN+HG G G+ N P PV+ L+S CGA
Sbjct: 200 TEVSCGSEHNLAII-GGVCYSWGWNEHGMCGDGTEANVWAPKPVQALLSSSGLLVGCGAG 258
Query: 172 FTVWL 176
++ L
Sbjct: 259 HSLAL 263
Score = 121 (47.7 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 61/223 (27%), Positives = 83/223 (37%)
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE---V 163
L K K+ AG H V T G + F W G G + P+ E V
Sbjct: 14 LHKEKVVCIAAGLRHAVAATASG--IVFQWGT-GLASCGRRLCPGQTLPLFFTAKEPSRV 70
Query: 164 TATACGADFTVWLSSVEGASILNAG-LPQYGQLGHGTDNEYNTKDSSVKLAYEAQ--PRP 220
T V S AS+ +AG + +G HG +LA EA P P
Sbjct: 71 TGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHG------------QLANEAAFLPVP 118
Query: 221 RAIAA--LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHR-EQKDEWVPRRVDV 277
+ I A E + + G H VA G ++TWG YG+LG + E + W + D
Sbjct: 119 QKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRKLETYEGWKLEKQDS 178
Query: 278 F----QRNNVLPPEAVISAGSVNSSCTAG------GGQLYMWG 310
F + N +P G+ SC + GG Y WG
Sbjct: 179 FLPCSRPPNSMPSSPHCLTGATEVSCGSEHNLAIIGGVCYSWG 221
Score = 118 (46.6 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 43/162 (26%), Positives = 67/162 (41%)
Query: 215 EAQPRPRAIA-ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
E P P + L E +V +A G H VA + G V+ WG G G R + +P
Sbjct: 2 EVPPSPESCCHMLHKEKVVCIAAGLRHAVAATASGIVFQWGTG-LASCGRRLCPGQTLPL 60
Query: 274 RVDVFQRNNVLPPE---AV-ISAGSVNSSCTAGGGQLYMWGKLKNN---GDDWMYPKPLM 326
+ + V E A+ + AGS +S+ G++Y+WG K+ + P P
Sbjct: 61 FFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANEAAFLPVPQK 120
Query: 327 D----LSGWNLRCMDSGNMHHFVGADSS-CISWGHAQYGELG 363
+ + SG H ++ +WG A YG+LG
Sbjct: 121 IEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLG 162
Score = 82 (33.9 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 20/61 (32%), Positives = 28/61 (45%)
Query: 339 GNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLV 398
G+ H+ C SWG ++G G G + + PK V L + V CG GHSL
Sbjct: 205 GSEHNLAIIGGVCYSWGWNEHGMCGDGT--EANVWAPKPVQALLSSSGLLVGCGAGHSLA 262
Query: 399 I 399
+
Sbjct: 263 L 263
Score = 54 (24.1 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 20/64 (31%), Positives = 28/64 (43%)
Query: 353 SWGHAQYGELG-----Y-G----------PYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
+WG A YG+LG Y G P + ++MP L G V+CG H+
Sbjct: 152 TWGRADYGQLGRKLETYEGWKLEKQDSFLPCSRPPNSMPSSPHCLTG--ATEVSCGSEHN 209
Query: 397 LVIV 400
L I+
Sbjct: 210 LAII 213
>DICTYBASE|DDB_G0282381 [details] [associations]
symbol:gefC "Ras nucleotide exchange factor"
species:44689 "Dictyostelium discoideum" [GO:0051056 "regulation of
small GTPase mediated signal transduction" evidence=IEA]
[GO:0035023 "regulation of Rho protein signal transduction"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005089 "Rho guanyl-nucleotide exchange factor
activity" evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] InterPro:IPR000219
InterPro:IPR000651 InterPro:IPR001895 InterPro:IPR008937
InterPro:IPR019804 Pfam:PF00617 Pfam:PF00618 Pfam:PF00621
PROSITE:PS00720 PROSITE:PS00741 PROSITE:PS50009 PROSITE:PS50010
PROSITE:PS50212 SMART:SM00147 SMART:SM00229 dictyBase:DDB_G0282381
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0007264 EMBL:AAFI02000047
GenomeReviews:CM000152_GR GO:GO:0005622 GO:GO:0005089
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
Gene3D:1.10.840.10 InterPro:IPR023578 SUPFAM:SSF48366
PANTHER:PTHR23113 HSSP:Q07889 EMBL:AY160092 RefSeq:XP_640241.1
ProteinModelPortal:Q8IS20 STRING:Q8IS20 EnsemblProtists:DDB0215004
GeneID:8623780 KEGG:ddi:DDB_G0282381 InParanoid:Q8IS20 OMA:SIATIRG
Uniprot:Q8IS20
Length = 1457
Score = 141 (54.7 bits), Expect = 2.9e-11, Sum P(3) = 2.9e-11
Identities = 50/190 (26%), Positives = 84/190 (44%)
Query: 151 IEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD--- 207
+E SP+ + +V A G V L+ EG ++ G GQLG+ D + +
Sbjct: 327 LENSPLNT-IKQV---ALGNYHIVLLT--EGGNVWTWGSNSNGQLGYLVDTQQQQQQQLQ 380
Query: 208 -----SSVK-LAYEAQPRPRAIAALAGETIVKVAC------GTNHTVAVDSKGYVYTWGF 255
SS++ A + P ++ +V++ C G +T A+ G +Y WG
Sbjct: 381 QQQSMSSLQPSASSSSPSSSSLQTTCTPKMVEIKCVKYIATGVKNTAALTEWGELYMWGI 440
Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN 315
+G LG + D P RV + +N V+ + I+ S +S+C G++Y+WG+
Sbjct: 441 NEHGELGLGDTIDRRTPTRV-IRLKNEVV---STIACSSTHSACYTESGKMYVWGQSDET 496
Query: 316 GDDWMYPKPL 325
G P PL
Sbjct: 497 GKIQAIPSPL 506
Score = 117 (46.2 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 29/99 (29%), Positives = 45/99 (45%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
++++A G + A+ G Y WG NE G+LG GD I R PT V L +
Sbjct: 416 VKYIATGVKNT--AALTEWGELYMWGINEHGELGLGDTIDRRTPTRVIRLKNEVVSTIAC 473
Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
+H+ TE G + W + + +G I+ P P+
Sbjct: 474 SSTHSACYTESGKM--YVWGQSDE--TGKIQAIPSPLPI 508
Score = 85 (35.0 bits), Expect = 0.00021, Sum P(3) = 0.00021
Identities = 35/152 (23%), Positives = 61/152 (40%)
Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT-ACGA 170
+K G +T +TE G +G N+HG+LG G + P+ V L +EV +T AC +
Sbjct: 416 VKYIATGVKNTAALTEWGELYMWGINEHGELGLGDTIDRRTPTRVIRLKNEVVSTIACSS 475
Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNE---YNTKDSSVKLAYEAQPRPRAIAAL- 226
+ + G + + G++ + ++ D +K P +
Sbjct: 476 THSACYTE-SGKMYVWGQSDETGKI-QAIPSPLPIHSYLDREIK-----SPNGGGVGGFF 528
Query: 227 -AGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
G I ++ACG + G V+ W G
Sbjct: 529 GGGGKIKQLACGQRCIAVLTQMGEVFMWEIPG 560
Score = 78 (32.5 bits), Expect = 2.9e-11, Sum P(3) = 2.9e-11
Identities = 29/100 (29%), Positives = 42/100 (42%)
Query: 80 YTWGRNERGQLGHGDKIQRDR-PT-----IVSELSKYKIKKAGAGRSHTVVVTEDGNSLA 133
+T+G G LG G KI D PT +E+ K ++KK G HTV VT+D +
Sbjct: 4 FTFGHGSNGALGLG-KITDDTCPTPQKVNYFTEIDK-RVKKVACGSYHTVFVTDDEHLYI 61
Query: 134 FGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFT 173
G K + G+ P P + T++ T
Sbjct: 62 CGIKKDPKHGTTLFYTS--PPPTTTTTTTTTSSTSATTTT 99
Score = 70 (29.7 bits), Expect = 0.00021, Sum P(3) = 0.00021
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH-GDKIQRDRPTIVSELSKYKIKKAG 116
I+ VA G + H V + G +TWG N GQLG+ D Q+ + + + S ++ +
Sbjct: 335 IKQVALG--NYHIVLLTEGGNVWTWGSNSNGQLGYLVDTQQQQQQQLQQQQSMSSLQPSA 392
Query: 117 AGRS 120
+ S
Sbjct: 393 SSSS 396
Score = 65 (27.9 bits), Expect = 2.9e-11, Sum P(3) = 2.9e-11
Identities = 28/107 (26%), Positives = 52/107 (48%)
Query: 304 GQLYMWGKLKNNGDDWMYPKPLMD-LSGWNLRCMDSGNMHHFVGADSS-CISWGHAQYGE 361
G+++MW + G P PL + L ++R + GN H DS ++ G + G+
Sbjct: 551 GEVFMW---EIPG----IPIPLRNALENHSVRNIVMGNFHLVCLTDSGEVVTIGRNKTGQ 603
Query: 362 LGYGPYGQKSSAMPKKVDI-LEGMH----VISVACGYGHSLVIVDRT 403
LG + + K++ +G++ V+S+A G HS+ +V+ T
Sbjct: 604 LGRTD-AENEPGIVKQLSFDPDGLNSDEFVVSIAAGEFHSVALVENT 649
Score = 59 (25.8 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 20/76 (26%), Positives = 36/76 (47%)
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDE-WVPRRVDVFQRNNV 283
AL ++ + G H V + G V T G G+LG + ++E + +++ F + +
Sbjct: 568 ALENHSVRNIVMGNFHLVCLTDSGEVVTIGRNKTGQLGRTDAENEPGIVKQLS-FDPDGL 626
Query: 284 LPPEAVIS--AGSVNS 297
E V+S AG +S
Sbjct: 627 NSDEFVVSIAAGEFHS 642
Score = 41 (19.5 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 14/52 (26%), Positives = 20/52 (38%)
Query: 32 AVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWG 83
A+G K D +P ++ +D R C S H V V + Y G
Sbjct: 13 ALGLGK-ITDDTCPTPQKVNYFTEIDKRVKKVACGSYHTVFVTDDEHLYICG 63
>POMBASE|SPBC557.03c [details] [associations]
symbol:pim1 "Ran GDP/GTP exchange factor" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005087 "Ran guanyl-nucleotide exchange factor
activity" evidence=IGI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006406 "mRNA export from nucleus" evidence=IMP] [GO:0006407
"rRNA export from nucleus" evidence=ISO] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IMP] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IC] [GO:0007346 "regulation of
mitotic cell cycle" evidence=IMP] [GO:0030071 "regulation of
mitotic metaphase/anaphase transition" evidence=IMP] [GO:0031291
"Ran protein signal transduction" evidence=IGI] [GO:0032888
"regulation of mitotic spindle elongation" evidence=IMP]
[GO:0042992 "negative regulation of transcription factor import
into nucleus" evidence=IMP] [GO:0060623 "regulation of chromosome
condensation" evidence=IGI] [GO:1901673 "regulation of spindle
assembly involved in mitosis" evidence=IMP] PomBase:SPBC557.03c
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0051301 GO:GO:0030071
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0000790
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0006406
GO:GO:0090307 GO:GO:0005087 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0007093 eggNOG:COG5184
GO:GO:0060623 GO:GO:0042992 GO:GO:0006407 GO:GO:0031291 EMBL:M73528
PIR:B40039 PIR:T50368 RefSeq:NP_596026.1 ProteinModelPortal:P28745
STRING:P28745 EnsemblFungi:SPBC557.03c.1 GeneID:2541059
KEGG:spo:SPBC557.03c HOGENOM:HOG000170207 OMA:KGIVYAW
OrthoDB:EOG466ZVF NextBio:20802173 Uniprot:P28745
Length = 539
Score = 170 (64.9 bits), Expect = 6.2e-11, Sum P(2) = 6.2e-11
Identities = 76/308 (24%), Positives = 126/308 (40%)
Query: 26 GSTCWDAVGRRKGALDGNLVSPTRLRPLVGVD-IRFVAAGCVSCHCVAVDVEGRCYTWGR 84
GS + +G + +D +V RL P++ D + V H A+ +GR YTWG
Sbjct: 77 GSGSMNELGMGEEEMD--VVYRPRLNPILSTDKVGVVDLAVGGMHSAALSHDGRVYTWGV 134
Query: 85 NERGQLG---------HGDKIQRD----RPTIVS-ELSKYKIKKAGAGRSHTVVVTEDGN 130
N+ LG +GDK+ D P+ V LS ++ K + T +T++G
Sbjct: 135 NDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVEGALSHLRVTKVICSDNLTAAITDNGC 194
Query: 131 SLAFGWNK--HGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
+G + G LG + P + + E+ A G D + L++ + G
Sbjct: 195 CFTWGTFRCSDGVLGYSDSQKRTA-EPTQMRLPEICQLATGTDHIIALTTT--GKVYTWG 251
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
Q QLG + + P+P A+ + I+ V G+ H+ A+D+KG
Sbjct: 252 NGQQFQLGRRMLERRRLQGLT--------PQPLAL-----KNIISVGAGSYHSFAIDNKG 298
Query: 249 YVYTWGFGGYGRLGHR-EQKDEWV----PRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
VY WG + G E ++E P VD + NV I+ G ++
Sbjct: 299 RVYAWGLNITRQCGIEVEDEEEGAVITKPTLVDALEGYNVKS----ITGGEHHTLALLED 354
Query: 304 GQLYMWGK 311
G++ WG+
Sbjct: 355 GRVLAWGR 362
Score = 168 (64.2 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 74/259 (28%), Positives = 112/259 (43%)
Query: 47 PTRLR-PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
PT++R P +I +A G + H +A+ G+ YTWG ++ QLG +R +
Sbjct: 220 PTQMRLP----EICQLATG--TDHIIALTTTGKVYTWGNGQQFQLGRRMLERRRLQGLTP 273
Query: 106 E-LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE------PSPVRC 158
+ L+ I GAG H+ + G A+G N Q G + +E E P+ V
Sbjct: 274 QPLALKNIISVGAGSYHSFAIDNKGRVYAWGLNITRQCGI-EVEDEEEGAVITKPTLVDA 332
Query: 159 LVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDN---EYNTKDSSVKLAYE 215
L + G + L+ +E +L G QLG DN E KD Y
Sbjct: 333 LEGYNVKSITGGEHHT-LALLEDGRVLAWGRDDRHQLGI-PDNALPETVVKDEKGNNYYL 390
Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
+ P I L +++V CGT+H +AV S G VY+WG +G + DE V V
Sbjct: 391 STPT--IIPGLTN--VIQVVCGTHHNLAVTSDGKVYSWGSAENYEVGQGDN-DEDVA--V 443
Query: 276 DVFQRNNVLPPEAVISAGS 294
R+ + A+ AG+
Sbjct: 444 PTLVRSKAIKEVAIRVAGA 462
Score = 140 (54.3 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 40/116 (34%), Positives = 57/116 (49%)
Query: 33 VGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH 92
+GRR L+ + +PL +I V AG S H A+D +GR Y WG N Q G
Sbjct: 258 LGRRM--LERRRLQGLTPQPLALKNIISVGAG--SYHSFAIDNKGRVYAWGLNITRQCGI 313
Query: 93 GDKIQRD-----RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG 143
+ + + +PT+V L Y +K G HT+ + EDG LA+G + QLG
Sbjct: 314 EVEDEEEGAVITKPTLVDALEGYNVKSITGGEHHTLALLEDGRVLAWGRDDRHQLG 369
Score = 136 (52.9 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 81/338 (23%), Positives = 140/338 (41%)
Query: 86 ERGQLGHGDKIQRDRPTI----VSELSKYKIKKAGAGRSHTV--VVTEDGNSLAFGWNKH 139
E+ +L D ++ + + VS L K A R + + + TE N FG
Sbjct: 22 EKRELDESDVMKNGKKPVKRAKVSSLPKPVRVPGSAKRINKIPELPTERLNVYVFGSGSM 81
Query: 140 GQLGSGSIRNEIEPSP-VRCLVSE----VTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
+LG G ++ P + ++S V A G + LS +G + G+
Sbjct: 82 NELGMGEEEMDVVYRPRLNPILSTDKVGVVDLAVGGMHSAALSH-DGR-VYTWGVNDDYA 139
Query: 195 LGHGTDNEYNTKDSSVKL-AYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
LG T ++ + V E P + AL+ + KV C N T A+ G +TW
Sbjct: 140 LGRLTKDQKDENGDKVDNDLLEGTPS-KVEGALSHLRVTKVICSDNLTAAITDNGCCFTW 198
Query: 254 G-FG-GYGRLGHRE-QKDEWVPRRVDVFQRNNVLP-PEAVISAGSVNSSCTAGGGQLYMW 309
G F G LG+ + QK P ++ + + + + +I+ + T G GQ +
Sbjct: 199 GTFRCSDGVLGYSDSQKRTAEPTQMRLPEICQLATGTDHIIALTTTGKVYTWGNGQQFQL 258
Query: 310 GK--LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGP 366
G+ L+ + P+PL L N+ + +G+ H F + +WG + G
Sbjct: 259 GRRMLERRRLQGLTPQPLA-LK--NIISVGAGSYHSFAIDNKGRVYAWGLNITRQCGIEV 315
Query: 367 YGQKSSAM---PKKVDILEGMHVISVACGYGHSLVIVD 401
++ A+ P VD LEG +V S+ G H+L +++
Sbjct: 316 EDEEEGAVITKPTLVDALEGYNVKSITGGEHHTLALLE 353
Score = 128 (50.1 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 65/293 (22%), Positives = 123/293 (41%)
Query: 40 LDGNLV--SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWG--RNERGQLGHGDK 95
+D +L+ +P+++ + +R C A+ G C+TWG R G LG+ D
Sbjct: 155 VDNDLLEGTPSKVEGALS-HLRVTKVICSDNLTAAITDNGCCFTWGTFRCSDGVLGYSDS 213
Query: 96 IQRD-RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI-RNEIEP 153
+R PT ++ +I + G H + +T G +G + QLG + R ++
Sbjct: 214 QKRTAEPT---QMRLPEICQLATGTDHIIALTTTGKVYTWGNGQQFQLGRRMLERRRLQG 270
Query: 154 -SPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
+P + + + G+ + + + +G + GL Q G ++E ++ +V
Sbjct: 271 LTPQPLALKNIISVGAGSYHSFAIDN-KGR-VYAWGLNITRQCGIEVEDE---EEGAVIT 325
Query: 213 AYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
+P + AL G + + G +HT+A+ G V WG +LG D +P
Sbjct: 326 ------KPTLVDALEGYNVKSITGGEHHTLALLEDGRVLAWGRDDRHQLGI---PDNALP 376
Query: 273 RRVDVFQRNN--------VLPPEA-VISA--GSVNSSCTAGGGQLYMWGKLKN 314
V ++ N ++P VI G+ ++ G++Y WG +N
Sbjct: 377 ETVVKDEKGNNYYLSTPTIIPGLTNVIQVVCGTHHNLAVTSDGKVYSWGSAEN 429
Score = 54 (24.1 bits), Expect = 6.2e-11, Sum P(2) = 6.2e-11
Identities = 22/71 (30%), Positives = 29/71 (40%)
Query: 339 GNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHV-ISVACGYGHS 396
G H+ V +D SWG A+ E+G G + A+P V V I VA G
Sbjct: 408 GTHHNLAVTSDGKVYSWGSAENYEVGQGD-NDEDVAVPTLVRSKAIKEVAIRVAGAGGQF 466
Query: 397 LVIVDRTNVGE 407
+I N E
Sbjct: 467 SIIAGIPNASE 477
>DICTYBASE|DDB_G0284187 [details] [associations]
symbol:Dd5P2 "inositol 5-phosphatase" species:44689
"Dictyostelium discoideum" [GO:0046856 "phosphatidylinositol
dephosphorylation" evidence=IDA] [GO:0046855 "inositol phosphate
dephosphorylation" evidence=IDA] [GO:0034485
"phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity"
evidence=IDA] [GO:0004445 "inositol-polyphosphate 5-phosphatase
activity" evidence=IDA] [GO:0004439
"phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity"
evidence=IDA] [GO:0046854 "phosphatidylinositol phosphorylation"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000300 SMART:SM00128 dictyBase:DDB_G0284187
INTERPRO:IPR000408 Pfam:PF00415 GenomeReviews:CM000153_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR005135
SUPFAM:SSF56219 EMBL:AAFI02000064 GO:GO:0046854 GO:GO:0046855
GO:GO:0004439 GO:GO:0046856 GO:GO:0004445 eggNOG:COG5411
GO:GO:0034485 RefSeq:XP_638694.1 ProteinModelPortal:Q54PV1
EnsemblProtists:DDB0191414 GeneID:8624525 KEGG:ddi:DDB_G0284187
InParanoid:Q54PV1 OMA:SHEKMER Uniprot:Q54PV1
Length = 1800
Score = 169 (64.5 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 48/157 (30%), Positives = 77/157 (49%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP-TIVSELSKYKIKKAGAGR 119
V C + H + +EG + WG N+ GQLG GD + + P T+ L KI + G
Sbjct: 273 VDIACGNFHSALLTLEGDLFLWGSNQYGQLGQGDSLDQSVPKTVKGSLEFVKINRMALGN 332
Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSI--RNEIE-PSPV---RCLVSEVTATA-CGADF 172
+HT+++T++ + FG N+ QLG GSI +N + P+ + + + S++ A C A F
Sbjct: 333 NHTILLTKEQDVFTFGSNEFYQLGHGSIGGKNRLYFPTQIQKPKVMASDIFAAGDCSAYF 392
Query: 173 T-----VWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
V L+ + +LN G G G+ N N
Sbjct: 393 VLDDSPVHLNLLGQHQLLNGAGGNGG--GGGSSNNNN 427
Score = 160 (61.4 bits), Expect = 8.0e-11, Sum P(2) = 8.0e-11
Identities = 50/192 (26%), Positives = 83/192 (43%)
Query: 93 GDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE 152
G+ + R T+ + K ++ G +HT+++T + + G+N+ GQLG ++ +
Sbjct: 57 GEVMGRKHTTLFKIVWKRRVVSVSCGFNHTLLLTSEYKIFSMGFNQTGQLGIENVVDSAV 116
Query: 153 PSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
P PV L S+ A V + E + G YGQLG+G N + +
Sbjct: 117 PLPVDTL-SKFNVIKIKAGNNVSAAITEAGDLYCWGSSAYGQLGNGKMNAKLHSFTPTTI 175
Query: 213 AYEAQPRPRAIAALAGETIVKVAC-GTNHTVAVDSKGYVYTWGFGGYGRLG--HREQKDE 269
P + C G HT+A+ + G +++WG YG+LG H K
Sbjct: 176 LNPLIPDAEKDDPIYQNLQYTNICFGAQHTIAISTTGAIFSWGSNQYGQLGLGHCNAKLV 235
Query: 270 WVPRRVD-VFQR 280
VP +D F+R
Sbjct: 236 PVPIHLDNSFER 247
Score = 146 (56.5 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 57/204 (27%), Positives = 92/204 (45%)
Query: 59 RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAG 118
R V+ C H + + E + ++ G N+ GQLG + + P V LSK+ + K AG
Sbjct: 75 RVVSVSCGFNHTLLLTSEYKIFSMGFNQTGQLGIENVVDSAVPLPVDTLSKFNVIKIKAG 134
Query: 119 RSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE---PSPV-RCLVSEVT---------- 164
+ + +TE G+ +G + +GQLG+G + ++ P+ + L+ +
Sbjct: 135 NNVSAAITEAGDLYCWGSSAYGQLGNGKMNAKLHSFTPTTILNPLIPDAEKDDPIYQNLQ 194
Query: 165 -ATAC-GADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
C GA T+ +S+ GA I + G QYGQLG G N + L + R
Sbjct: 195 YTNICFGAQHTIAISTT-GA-IFSWGSNQYGQLGLGHCNA-KLVPVPIHLDNSFERRAGH 251
Query: 223 IAALAGETIVK-VACGTNHTVAVD 245
I +L GE + T H + VD
Sbjct: 252 INSL-GEIVTTDFTAKTIHRIVVD 274
Score = 127 (49.8 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 29/80 (36%), Positives = 42/80 (52%)
Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVI 290
+V V+CG NHT+ + S+ +++ GF G+LG D VP VD + NV+ I
Sbjct: 76 VVSVSCGFNHTLLLTSEYKIFSMGFNQTGQLGIENVVDSAVPLPVDTLSKFNVIK----I 131
Query: 291 SAGSVNSSCTAGGGQLYMWG 310
AG+ S+ G LY WG
Sbjct: 132 KAGNNVSAAITEAGDLYCWG 151
Score = 77 (32.2 bits), Expect = 8.0e-11, Sum P(2) = 8.0e-11
Identities = 21/69 (30%), Positives = 34/69 (49%)
Query: 339 GNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVD-ILEGMHVISVACGYGHS 396
GN H + + WG QYG+LG G +S +PK V LE + + +A G H+
Sbjct: 278 GNFHSALLTLEGDLFLWGSNQYGQLGQGDSLDQS--VPKTVKGSLEFVKINRMALGNNHT 335
Query: 397 LVIVDRTNV 405
+++ +V
Sbjct: 336 ILLTKEQDV 344
Score = 68 (29.0 bits), Expect = 6.8e-10, Sum P(2) = 6.8e-10
Identities = 23/90 (25%), Positives = 41/90 (45%)
Query: 290 ISAGSVNSSCTAGGGQLYMWGKLK----NNGD--DWMYPKPLM-DLSGWNLRCMDSGNMH 342
I+ G+ +S+ G L++WG + GD D PK + L + M GN H
Sbjct: 275 IACGNFHSALLTLEGDLFLWGSNQYGQLGQGDSLDQSVPKTVKGSLEFVKINRMALGNNH 334
Query: 343 HFV-GADSSCISWGHAQYGELGYGPYGQKS 371
+ + ++G ++ +LG+G G K+
Sbjct: 335 TILLTKEQDVFTFGSNEFYQLGHGSIGGKN 364
Score = 62 (26.9 bits), Expect = 3.8e-05, Sum P(3) = 3.8e-05
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 339 GNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVD 379
G H + + SWG QYG+LG G K +P +D
Sbjct: 201 GAQHTIAISTTGAIFSWGSNQYGQLGLGHCNAKLVPVPIHLD 242
Score = 38 (18.4 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
Identities = 6/14 (42%), Positives = 10/14 (71%)
Query: 386 VISVACGYGHSLVI 399
V+ +ACG HS ++
Sbjct: 272 VVDIACGNFHSALL 285
>UNIPROTKB|F1NDJ4 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104312 EMBL:AADN02038799 IPI:IPI00812606
Ensembl:ENSGALT00000038135 OMA:GHKDTSS Uniprot:F1NDJ4
Length = 221
Score = 143 (55.4 bits), Expect = 8.4e-08, P = 8.4e-08
Identities = 46/169 (27%), Positives = 74/169 (43%)
Query: 137 NKHGQLGSGSIRNEIEPS--------PVRCLVSEVTATAC---GADFTVWLSSVEGASIL 185
++HGQLG GS+ +E +P P+R + + +AC G D VW + G L
Sbjct: 8 HRHGQLGHGSLESEQQPRLVEALGGVPMRAVAAGGWHSACVSDGGDLYVWGWNESGQLGL 67
Query: 186 --NAGLPQYGQ---LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
A + + +G G ++ + Q P + + V+CG+ H
Sbjct: 68 PSRAVAEEQAEDEDMGAGPEDPLLPGEPPGAAFISIQAFPALLDLPLEPAVAAVSCGSRH 127
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
T A+ G + TWG+G YG+LGH ++ PRRV+ + E V
Sbjct: 128 TAALTRGGELNTWGWGKYGQLGHGDRASCDHPRRVEQLWAEGLRAQEVV 176
Score = 113 (44.8 bits), Expect = 1.5e-10, Sum P(3) = 1.5e-10
Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 85 NERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG 143
+ GQLGHG +P +V L ++ AG H+ V++ G+ +GWN+ GQLG
Sbjct: 8 HRHGQLGHGSLESEQQPRLVEALGGVPMRAVAAGGWHSACVSDGGDLYVWGWNESGQLG 66
Score = 94 (38.1 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 21/53 (39%), Positives = 31/53 (58%)
Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
+G+LGH + E PR V+ +P AV +AG +S+C + GG LY+WG
Sbjct: 10 HGQLGHGSLESEQQPRLVEAL---GGVPMRAV-AAGGWHSACVSDGGDLYVWG 58
Score = 87 (35.7 bits), Expect = 3.0e-07, Sum P(3) = 3.0e-07
Identities = 27/60 (45%), Positives = 30/60 (50%)
Query: 36 RKGALD-GNLVS---PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG 91
R G L G+L S P + L GV +R VAAG H V G Y WG NE GQLG
Sbjct: 9 RHGQLGHGSLESEQQPRLVEALGGVPMRAVAAG--GWHSACVSDGGDLYVWGWNESGQLG 66
Score = 77 (32.2 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 17/51 (33%), Positives = 23/51 (45%)
Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE 162
+ G HT +T G +GW K+GQLG G + P V L +E
Sbjct: 118 VAAVSCGSRHTAALTRGGELNTWGWGKYGQLGHGDRASCDHPRRVEQLWAE 168
Score = 76 (31.8 bits), Expect = 1.5e-10, Sum P(3) = 1.5e-10
Identities = 18/50 (36%), Positives = 29/50 (58%)
Query: 353 SWGHAQYGELGYGPYGQKSSAMPKKVDIL--EGMHVISVACGYGHSLVIV 400
+WG +YG+LG+G + S P++V+ L EG+ V CG ++ V V
Sbjct: 139 TWGWGKYGQLGHGD--RASCDHPRRVEQLWAEGLRAQEVVCGPWNTYVCV 186
Score = 54 (24.1 bits), Expect = 1.5e-10, Sum P(3) = 1.5e-10
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
P A +S GS +++ GG+L WG
Sbjct: 116 PAVAAVSCGSRHTAALTRGGELNTWG 141
>GENEDB_PFALCIPARUM|PFE0420c [details] [associations]
symbol:PFE0420c "guanidine nucleotide exchange
factor, putative" species:5833 "Plasmodium falciparum" [GO:0006323
"DNA packaging" evidence=ISS] [GO:0020011 "apicoplast"
evidence=RCA] INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0006323 EMBL:AL844504
GenomeReviews:AL844504_GR RefSeq:XP_001351643.1
ProteinModelPortal:Q8I418 EnsemblProtists:PFE0420c:mRNA
GeneID:812857 KEGG:pfa:PFE0420c EuPathDB:PlasmoDB:PF3D7_0508500
HOGENOM:HOG000284105 ProtClustDB:CLSZ2446497 Uniprot:Q8I418
Length = 2606
Score = 149 (57.5 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 46/165 (27%), Positives = 81/165 (49%)
Query: 219 RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH-REQKDEWVPRRVDV 277
+P+ I L + I+ V GT+H+ +DS VYTWG G + +LGH + D + P+ V+
Sbjct: 481 KPQLIKGLRNKRILYVCAGTSHSGCIDSNYNVYTWGNGKFYKLGHGNDDIDIYYPKLVEC 540
Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG--KLKNNGDDWMYPKPLMDLSGWNLRC 335
N + ++S G NS G +Y+WG + NN ++ Y L N +C
Sbjct: 541 LNHNKKV---CMLSFGCFNSLALNVKGDVYVWGTFNITNNYVNY-YISKLPKQINTNYKC 596
Query: 336 MDSGNMHHFVGADSSCISWGHAQYGEL-GYGPYGQKSSAMPKKVD 379
+ ++H S+ + +G G+L +G Y K+ + K+++
Sbjct: 597 I---SIHA-----STYVCFGITLVGDLISFGNY--KNYSYEKEIN 631
Score = 137 (53.3 bits), Expect = 7.0e-09, Sum P(2) = 7.0e-09
Identities = 54/217 (24%), Positives = 94/217 (43%)
Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIA-ALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
G D++Y+ D++ Y+ + +I ++ + G+ H++A + G +Y+WG
Sbjct: 406 GDNNDDDYDD-DNNNNSTYKFHKKEDSIKWDKKKNVVIHCSAGSKHSLACNLHGDIYSWG 464
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG---- 310
+GG GRLG K P+ + + +L + AG+ +S C +Y WG
Sbjct: 465 YGGNGRLGLGNIKSYNKPQLIKGLRNKRIL----YVCAGTSHSGCIDSNYNVYTWGNGKF 520
Query: 311 -KLKNNGDDW--MYPKPLMDLSGWNLR-CMDS-GNMHHF-VGADSSCISWGHAQYGELGY 364
KL + DD YPK L++ N + CM S G + + WG Y
Sbjct: 521 YKLGHGNDDIDIYYPK-LVECLNHNKKVCMLSFGCFNSLALNVKGDVYVWGTFNITN-NY 578
Query: 365 GPYGQKSSAMPKKVDI---LEGMHVISVACGYGHSLV 398
Y S +PK+++ +H + C +G +LV
Sbjct: 579 VNY--YISKLPKQINTNYKCISIHASTYVC-FGITLV 612
Score = 133 (51.9 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 49/193 (25%), Positives = 79/193 (40%)
Query: 218 PRPRAIAALAGETIVK-VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P P I T +K ++CG HT+A+ + G +Y+WG+ +G +G+ ++ + P
Sbjct: 337 PFPMKIVFPKKNTKIKFISCGDMHTLAICTGGVLYSWGYNNFGCIGNGTNQNVYEP--TP 394
Query: 277 VFQRNNVLPPEAVISAGSVNSSC---TAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNL 333
+F L P +V + G N Y + K K + W K ++ +
Sbjct: 395 IF-----LEPHSVDNNGDNNDDDYDDDNNNNSTYKFHK-KEDSIKWDKKKNVV------I 442
Query: 334 RCMDSGNMHHFV-GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
C +G+ H SWG+ G LG G KS P+ + L ++ V G
Sbjct: 443 HC-SAGSKHSLACNLHGDIYSWGYGGNGRLGLGNI--KSYNKPQLIKGLRNKRILYVCAG 499
Query: 393 YGHSLVIVDRTNV 405
HS I NV
Sbjct: 500 TSHSGCIDSNYNV 512
Score = 113 (44.8 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 29/94 (30%), Positives = 47/94 (50%)
Query: 67 SCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVT 126
S H +A ++ G Y+WG G+LG G+ ++P ++ L +I AG SH+ +
Sbjct: 448 SKHSLACNLHGDIYSWGYGGNGRLGLGNIKSYNKPQLIKGLRNKRILYVCAGTSHSGCID 507
Query: 127 EDGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCL 159
+ N +G K +LG G+ +I P V CL
Sbjct: 508 SNYNVYTWGNGKFYKLGHGNDDIDIYYPKLVECL 541
Score = 113 (44.8 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 50/157 (31%), Positives = 74/157 (47%)
Query: 144 SGSIRNEIEPSPVRCLVSEVTATACGAD-FTVWLSSVEGASILNAGLPQYGQLGHGTDNE 202
+GS N E + + L S+V G+D F+V+L +E + AG + G+LG+G E
Sbjct: 736 NGSHGNIFEKNKL-VLKSKVKIID-GSDHFSVFL--LESGKVYTAGYNKNGELGNG---E 788
Query: 203 YNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
+N K K P + + I+K+ACG N+ + V G VY WG +LG
Sbjct: 789 FNLKK---KFGV---P---ILLNICVNKIIKIACGYNYVLCVSDVGLVYGWGKNDKSQLG 839
Query: 263 HREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSC 299
KD + P V V NV+ I AG +S+C
Sbjct: 840 IGVIKDFYEP--VHVKNLTNVIN----IFAGYDHSAC 870
Score = 86 (35.3 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
IV KIK G HT+ + G ++G+N G +G+G+ +N EP+P+
Sbjct: 342 IVFPKKNTKIKFISCGDMHTLAICTGGVLYSWGYNNFGCIGNGTNQNVYEPTPI 395
Score = 73 (30.8 bits), Expect = 7.5e-09, Sum P(2) = 7.5e-09
Identities = 36/160 (22%), Positives = 58/160 (36%)
Query: 52 PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
P I+F++ G H +A+ G Y+WG N G +G+G PT + L +
Sbjct: 345 PKKNTKIKFISCG--DMHTLAICTGGVLYSWGYNNFGCIGNGTNQNVYEPTPIF-LEPHS 401
Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGAD 171
+ G + NS K + +N + + C + AC
Sbjct: 402 VDNNGDNNDDDYDDDNNNNSTYKFHKKEDSIKWDKKKNVV----IHCSAGSKHSLAC--- 454
Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVK 211
++ G I + G G+LG G YN K +K
Sbjct: 455 ------NLHG-DIYSWGYGGNGRLGLGNIKSYN-KPQLIK 486
Score = 69 (29.3 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 355 GHAQYGELGYGPYG-QKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
G+ + GELG G + +K +P ++I +I +ACGY + L + D
Sbjct: 777 GYNKNGELGNGEFNLKKKFGVPILLNICVNK-IIKIACGYNYVLCVSD 823
Score = 55 (24.4 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 24/91 (26%), Positives = 39/91 (42%)
Query: 61 VAAGCVSCHCVAV-DVEGRCYTWGRNERGQLGHGDKIQR-DRPTIVSELSKYKIKKAGAG 118
++ G CVA + +TWG N QLG G + + PT+V + +
Sbjct: 22 ISTGLDHYACVAYYKNKPSIFTWGGNSCNQLGLGINNRFVNNPTVVCFFDSFIVASICCT 81
Query: 119 RSHT-VVVTEDGNSL-----AFGWNKHGQLG 143
T V+V ++ N + +FG +G LG
Sbjct: 82 NYATFVLVKKNVNDIGCSVYSFGKGNNGLLG 112
Score = 50 (22.7 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 74 DVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK 114
D+ Y++G+ G LG+ K +R+ P + K I+K
Sbjct: 95 DIGCSVYSFGKGNNGLLGY--KKKRELPNFLEHEEKKNIQK 133
>UNIPROTKB|Q8I418 [details] [associations]
symbol:RCC1 "Guanidine nucleotide exchange factor"
species:36329 "Plasmodium falciparum 3D7" [GO:0006323 "DNA
packaging" evidence=ISS] [GO:0020011 "apicoplast" evidence=RCA]
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0006323 EMBL:AL844504
GenomeReviews:AL844504_GR RefSeq:XP_001351643.1
ProteinModelPortal:Q8I418 EnsemblProtists:PFE0420c:mRNA
GeneID:812857 KEGG:pfa:PFE0420c EuPathDB:PlasmoDB:PF3D7_0508500
HOGENOM:HOG000284105 ProtClustDB:CLSZ2446497 Uniprot:Q8I418
Length = 2606
Score = 149 (57.5 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 46/165 (27%), Positives = 81/165 (49%)
Query: 219 RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH-REQKDEWVPRRVDV 277
+P+ I L + I+ V GT+H+ +DS VYTWG G + +LGH + D + P+ V+
Sbjct: 481 KPQLIKGLRNKRILYVCAGTSHSGCIDSNYNVYTWGNGKFYKLGHGNDDIDIYYPKLVEC 540
Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG--KLKNNGDDWMYPKPLMDLSGWNLRC 335
N + ++S G NS G +Y+WG + NN ++ Y L N +C
Sbjct: 541 LNHNKKV---CMLSFGCFNSLALNVKGDVYVWGTFNITNNYVNY-YISKLPKQINTNYKC 596
Query: 336 MDSGNMHHFVGADSSCISWGHAQYGEL-GYGPYGQKSSAMPKKVD 379
+ ++H S+ + +G G+L +G Y K+ + K+++
Sbjct: 597 I---SIHA-----STYVCFGITLVGDLISFGNY--KNYSYEKEIN 631
Score = 137 (53.3 bits), Expect = 7.0e-09, Sum P(2) = 7.0e-09
Identities = 54/217 (24%), Positives = 94/217 (43%)
Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIA-ALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
G D++Y+ D++ Y+ + +I ++ + G+ H++A + G +Y+WG
Sbjct: 406 GDNNDDDYDD-DNNNNSTYKFHKKEDSIKWDKKKNVVIHCSAGSKHSLACNLHGDIYSWG 464
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG---- 310
+GG GRLG K P+ + + +L + AG+ +S C +Y WG
Sbjct: 465 YGGNGRLGLGNIKSYNKPQLIKGLRNKRIL----YVCAGTSHSGCIDSNYNVYTWGNGKF 520
Query: 311 -KLKNNGDDW--MYPKPLMDLSGWNLR-CMDS-GNMHHF-VGADSSCISWGHAQYGELGY 364
KL + DD YPK L++ N + CM S G + + WG Y
Sbjct: 521 YKLGHGNDDIDIYYPK-LVECLNHNKKVCMLSFGCFNSLALNVKGDVYVWGTFNITN-NY 578
Query: 365 GPYGQKSSAMPKKVDI---LEGMHVISVACGYGHSLV 398
Y S +PK+++ +H + C +G +LV
Sbjct: 579 VNY--YISKLPKQINTNYKCISIHASTYVC-FGITLV 612
Score = 133 (51.9 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 49/193 (25%), Positives = 79/193 (40%)
Query: 218 PRPRAIAALAGETIVK-VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P P I T +K ++CG HT+A+ + G +Y+WG+ +G +G+ ++ + P
Sbjct: 337 PFPMKIVFPKKNTKIKFISCGDMHTLAICTGGVLYSWGYNNFGCIGNGTNQNVYEP--TP 394
Query: 277 VFQRNNVLPPEAVISAGSVNSSC---TAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNL 333
+F L P +V + G N Y + K K + W K ++ +
Sbjct: 395 IF-----LEPHSVDNNGDNNDDDYDDDNNNNSTYKFHK-KEDSIKWDKKKNVV------I 442
Query: 334 RCMDSGNMHHFV-GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
C +G+ H SWG+ G LG G KS P+ + L ++ V G
Sbjct: 443 HC-SAGSKHSLACNLHGDIYSWGYGGNGRLGLGNI--KSYNKPQLIKGLRNKRILYVCAG 499
Query: 393 YGHSLVIVDRTNV 405
HS I NV
Sbjct: 500 TSHSGCIDSNYNV 512
Score = 113 (44.8 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 29/94 (30%), Positives = 47/94 (50%)
Query: 67 SCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVT 126
S H +A ++ G Y+WG G+LG G+ ++P ++ L +I AG SH+ +
Sbjct: 448 SKHSLACNLHGDIYSWGYGGNGRLGLGNIKSYNKPQLIKGLRNKRILYVCAGTSHSGCID 507
Query: 127 EDGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCL 159
+ N +G K +LG G+ +I P V CL
Sbjct: 508 SNYNVYTWGNGKFYKLGHGNDDIDIYYPKLVECL 541
Score = 113 (44.8 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 50/157 (31%), Positives = 74/157 (47%)
Query: 144 SGSIRNEIEPSPVRCLVSEVTATACGAD-FTVWLSSVEGASILNAGLPQYGQLGHGTDNE 202
+GS N E + + L S+V G+D F+V+L +E + AG + G+LG+G E
Sbjct: 736 NGSHGNIFEKNKL-VLKSKVKIID-GSDHFSVFL--LESGKVYTAGYNKNGELGNG---E 788
Query: 203 YNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
+N K K P + + I+K+ACG N+ + V G VY WG +LG
Sbjct: 789 FNLKK---KFGV---P---ILLNICVNKIIKIACGYNYVLCVSDVGLVYGWGKNDKSQLG 839
Query: 263 HREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSC 299
KD + P V V NV+ I AG +S+C
Sbjct: 840 IGVIKDFYEP--VHVKNLTNVIN----IFAGYDHSAC 870
Score = 86 (35.3 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
IV KIK G HT+ + G ++G+N G +G+G+ +N EP+P+
Sbjct: 342 IVFPKKNTKIKFISCGDMHTLAICTGGVLYSWGYNNFGCIGNGTNQNVYEPTPI 395
Score = 73 (30.8 bits), Expect = 7.5e-09, Sum P(2) = 7.5e-09
Identities = 36/160 (22%), Positives = 58/160 (36%)
Query: 52 PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
P I+F++ G H +A+ G Y+WG N G +G+G PT + L +
Sbjct: 345 PKKNTKIKFISCG--DMHTLAICTGGVLYSWGYNNFGCIGNGTNQNVYEPTPIF-LEPHS 401
Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGAD 171
+ G + NS K + +N + + C + AC
Sbjct: 402 VDNNGDNNDDDYDDDNNNNSTYKFHKKEDSIKWDKKKNVV----IHCSAGSKHSLAC--- 454
Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVK 211
++ G I + G G+LG G YN K +K
Sbjct: 455 ------NLHG-DIYSWGYGGNGRLGLGNIKSYN-KPQLIK 486
Score = 69 (29.3 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 355 GHAQYGELGYGPYG-QKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
G+ + GELG G + +K +P ++I +I +ACGY + L + D
Sbjct: 777 GYNKNGELGNGEFNLKKKFGVPILLNICVNK-IIKIACGYNYVLCVSD 823
Score = 55 (24.4 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 24/91 (26%), Positives = 39/91 (42%)
Query: 61 VAAGCVSCHCVAV-DVEGRCYTWGRNERGQLGHGDKIQR-DRPTIVSELSKYKIKKAGAG 118
++ G CVA + +TWG N QLG G + + PT+V + +
Sbjct: 22 ISTGLDHYACVAYYKNKPSIFTWGGNSCNQLGLGINNRFVNNPTVVCFFDSFIVASICCT 81
Query: 119 RSHT-VVVTEDGNSL-----AFGWNKHGQLG 143
T V+V ++ N + +FG +G LG
Sbjct: 82 NYATFVLVKKNVNDIGCSVYSFGKGNNGLLG 112
Score = 50 (22.7 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 74 DVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK 114
D+ Y++G+ G LG+ K +R+ P + K I+K
Sbjct: 95 DIGCSVYSFGKGNNGLLGY--KKKRELPNFLEHEEKKNIQK 133
>MGI|MGI:1918677 [details] [associations]
symbol:Ibtk "inhibitor of Bruton agammaglobulinemia tyrosine
kinase" species:10090 "Mus musculus" [GO:0001933 "negative
regulation of protein phosphorylation" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0016020 "membrane" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0030292
"protein tyrosine kinase inhibitor activity" evidence=ISO]
[GO:0051209 "release of sequestered calcium ion into cytosol"
evidence=ISO] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISO] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 MGI:MGI:1918677
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0016020 GO:GO:0051209 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 EMBL:CH466522
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GO:GO:0030292 CTD:25998 HOVERGEN:HBG081779 OMA:VSALHHK
OrthoDB:EOG4J6RQ1 ChiTaRS:IBTK EMBL:BC137798 EMBL:AK030895
EMBL:AK077387 EMBL:AK129353 IPI:IPI00660767 IPI:IPI00750982
RefSeq:NP_001074751.1 UniGene:Mm.22315 UniGene:Mm.487092
ProteinModelPortal:Q6ZPR6 SMR:Q6ZPR6 PhosphoSite:Q6ZPR6
PaxDb:Q6ZPR6 PRIDE:Q6ZPR6 Ensembl:ENSMUST00000039213 GeneID:108837
KEGG:mmu:108837 GeneTree:ENSGT00700000104160 HOGENOM:HOG000090207
InParanoid:Q6ZPR6 NextBio:361375 Bgee:Q6ZPR6 Genevestigator:Q6ZPR6
Uniprot:Q6ZPR6
Length = 1352
Score = 175 (66.7 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 67/248 (27%), Positives = 107/248 (43%)
Query: 69 HCVAVDVEG-RCYTWGRNERGQLGHGDKIQRDRPTIVSELSK--YKIKKAGAGRSHTVVV 125
H V D + YTWG N LGHG + + P ++ S+ +K+ + H+V +
Sbjct: 133 HVVFKDTDPTEVYTWGDNTNFTLGHGSQNSKHHPELLDLFSRSGVYVKQVVLCKFHSVFL 192
Query: 126 TEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASI 184
++ G G + G+LG G + + P V L + A D TV L+ +G +
Sbjct: 193 SQKGQVYTCGHGRGGRLGHGDEQTCLVPRLVEGLSGHNCSQVAAAKDHTVVLTD-DGC-V 250
Query: 185 LNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV 244
GL + QLG +S + PR L G TI+ VA G HTV +
Sbjct: 251 YTFGLNMFHQLG------IIPPPASCNV-----PRQIQAKYLKGRTIIGVAAGRFHTV-L 298
Query: 245 DSKGYVYTWGFGGYGRLGH----REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
++ VYT G G G+LGH +K PR+V ++ ++++A + C
Sbjct: 299 WTREAVYTLGLNG-GQLGHLLDPNGEKCVTTPRQVSALHHKDIAV--SLVAASDGATVCV 355
Query: 301 AGGGQLYM 308
G +Y+
Sbjct: 356 TTRGDIYL 363
Score = 158 (60.7 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 72/282 (25%), Positives = 116/282 (41%)
Query: 55 GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK 114
GV ++ V C H V + +G+ YT G G+LGHGD+ P +V LS + +
Sbjct: 176 GVYVKQVVL-C-KFHSVFLSQKGQVYTCGHGRGGRLGHGDEQTCLVPRLVEGLSGHNCSQ 233
Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLG------SGSIRNEIEPSPVRCLVSEVTATAC 168
A + HTVV+T+DG FG N QLG S ++ +I+ ++ + A
Sbjct: 234 VAAAKDHTVVLTDDGCVYTFGLNMFHQLGIIPPPASCNVPRQIQAKYLKGRT--IIGVAA 291
Query: 169 GADFTV-WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALA 227
G TV W ++ GL GQLGH D + PR ++AL
Sbjct: 292 GRFHTVLWTRE----AVYTLGL-NGGQLGHLLDPN----------GEKCVTTPRQVSALH 336
Query: 228 GETIVK--VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
+ I VA TV V ++G +Y ++ ++ + V + +
Sbjct: 337 HKDIAVSLVAASDGATVCVTTRGDIYLLADYQCKKMATKQLNLKKVLVSGGCMEYK--VD 394
Query: 286 PEAVISAGSVNSSCTA--GGGQLYMWGKLKNNGDD--WMYPK 323
PE + G A G G+++ W + ++ W YP+
Sbjct: 395 PEHLTENGGQKICVLAMDGAGRVFCWRSISSSLKQCRWAYPR 436
Score = 135 (52.6 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 47/169 (27%), Positives = 79/169 (46%)
Query: 240 HTVAVDSKGY-VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSS 298
H V D+ VYTWG LGH Q + P +D+F R+ V + V+ +S
Sbjct: 133 HVVFKDTDPTEVYTWGDNTNFTLGHGSQNSKHHPELLDLFSRSGVYVKQVVLC--KFHSV 190
Query: 299 CTAGGGQLYMWGKLKN----NGDDW--MYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI 352
+ GQ+Y G + +GD+ + P+ + LSG N + + H V D C+
Sbjct: 191 FLSQKGQVYTCGHGRGGRLGHGDEQTCLVPRLVEGLSGHNCSQVAAAKDHTVVLTDDGCV 250
Query: 353 -SWGHAQYGELGYGPYGQKSSAMPKKVDI--LEGMHVISVACGYGHSLV 398
++G + +LG P S +P+++ L+G +I VA G H+++
Sbjct: 251 YTFGLNMFHQLGIIP-PPASCNVPRQIQAKYLKGRTIIGVAAGRFHTVL 298
>FB|FBgn0045980 [details] [associations]
symbol:niki "nimA-like kinase" species:7227 "Drosophila
melanogaster" [GO:0004702 "receptor signaling protein
serine/threonine kinase activity" evidence=ISS;NAS] [GO:0006468
"protein phosphorylation" evidence=IEA;NAS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE014297
GO:GO:0005524 eggNOG:COG0515 SUPFAM:SSF56112 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004702 HSSP:O14965
PRINTS:PR00633 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104137 RefSeq:NP_651293.1 UniGene:Dm.27397
ProteinModelPortal:Q9VC32 SMR:Q9VC32 PRIDE:Q9VC32
EnsemblMetazoa:FBtr0084737 GeneID:42959 KEGG:dme:Dmel_CG10951
UCSC:CG10951-RA CTD:42959 FlyBase:FBgn0045980 InParanoid:Q9VC32
OMA:WRHYPTK OrthoDB:EOG4FJ6QP PhylomeDB:Q9VC32 GenomeRNAi:42959
NextBio:831528 ArrayExpress:Q9VC32 Bgee:Q9VC32 Uniprot:Q9VC32
Length = 841
Score = 172 (65.6 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 57/194 (29%), Positives = 94/194 (48%)
Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRN-EIEPSPVRCLVSEVTATACGAD-FTVWLS 177
SH VVV EDG++ A+G HGQLG ++ + PS + + + +AC D FT+ ++
Sbjct: 462 SHFVVVNEDGSAYAWGEGTHGQLGLTALEAWKHYPSRMESVRNYHVVSACAGDGFTILVT 521
Query: 178 SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
+ S+L+ G L G D + N Y + P+ IA LA + +VA G
Sbjct: 522 --QAGSLLSCG--SNAHLALGQDEQRN---------YHS---PKLIARLADVRVEQVAAG 565
Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLG-HREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVN 296
H +A+ +G VY WG G LG Q+ + P+++ + ++V + I G
Sbjct: 566 LQHVLALSREGAVYVWGTSTCGALGLGNYQQQQKFPQKILL---SHVKTKPSKIYCGPDT 622
Query: 297 SSCTAGGGQLYMWG 310
S+ G+L++ G
Sbjct: 623 SAVLFANGELHVCG 636
Score = 158 (60.7 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 53/196 (27%), Positives = 83/196 (42%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLG-HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTE 127
H V V+ +G Y WG GQLG + + P+ + + Y + A AG T++VT+
Sbjct: 463 HFVVVNEDGSAYAWGEGTHGQLGLTALEAWKHYPSRMESVRNYHVVSACAGDGFTILVTQ 522
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILN 186
G+ L+ G N H LG RN P + L V A G + LS EGA +
Sbjct: 523 AGSLLSCGSNAHLALGQDEQRNYHSPKLIARLADVRVEQVAAGLQHVLALSR-EGA-VYV 580
Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDS 246
G G LG G + + L++ + +P K+ CG + + + +
Sbjct: 581 WGTSTCGALGLGNYQQQQKFPQKILLSH-VKTKPS-----------KIYCGPDTSAVLFA 628
Query: 247 KGYVYTWGFGGYGRLG 262
G ++ G Y +LG
Sbjct: 629 NGELHVCGSNDYNKLG 644
Score = 126 (49.4 bits), Expect = 0.00015, P = 0.00015
Identities = 55/235 (23%), Positives = 96/235 (40%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P+R+ + + AG + V G + G N LG ++ P +++
Sbjct: 496 PSRMESVRNYHVVSACAG--DGFTILVTQAGSLLSCGSNAHLALGQDEQRNYHSPKLIAR 553
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT 166
L+ ++++ AG H + ++ +G +G + G LG G+ + + + P + L+S V
Sbjct: 554 LADVRVEQVAAGLQHVLALSREGAVYVWGTSTCGALGLGNYQQQ-QKFPQKILLSHVKTK 612
Query: 167 A----CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
CG D + ++L A G+L N+YN KL ++ + A
Sbjct: 613 PSKIYCGPDTS---------AVLFAN----GELHVCGSNDYN------KLGFQRSAKITA 653
Query: 223 IAALAGETIVKVAC-GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
+ V AC + H+V + GYVYT G G+ G R P VD
Sbjct: 654 FKKVQLPHKVTQACFSSTHSVFLVEGGYVYTMGRNAEGQRGIRHCNSVDHPTLVD 708
>UNIPROTKB|F1RQL8 [details] [associations]
symbol:IBTK "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051209 "release of sequestered calcium ion into
cytosol" evidence=IEA] [GO:0030292 "protein tyrosine kinase
inhibitor activity" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0051209
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 GO:GO:0030292
OMA:VSALHHK GeneTree:ENSGT00700000104160 EMBL:CU392845
Ensembl:ENSSSCT00000004926 Uniprot:F1RQL8
Length = 1346
Score = 174 (66.3 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 66/236 (27%), Positives = 101/236 (42%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSK--YKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
YTWG N LGHG + + P +V S+ IK+ + H+V +++ G G
Sbjct: 145 YTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGVYIKQVVLCKFHSVFLSQKGQVYTCGHG 204
Query: 138 KHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
G+LG G + + P V L + A D TV L+ E + GL + QLG
Sbjct: 205 PGGRLGHGDEQTCLVPRLVEGLSGHNCSQVAAAKDHTVVLT--EDGCVYTFGLNIFHQLG 262
Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
S+ + PR L G TI+ VA G HTV + ++ VYT G
Sbjct: 263 ------IIPPPSNCNV-----PRQMQAKYLKGRTIIGVAAGRFHTV-LWTREAVYTLGLN 310
Query: 257 GYGRLGH----REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
G G+LGH +K PR+V ++ ++++A + C G +Y+
Sbjct: 311 G-GQLGHLLDPSGEKCVTAPRQVSALHHKDIAL--SLVAASDGATVCVTARGDIYL 363
Score = 161 (61.7 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 79/280 (28%), Positives = 112/280 (40%)
Query: 55 GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK 114
GV I+ V C H V + +G+ YT G G+LGHGD+ P +V LS + +
Sbjct: 176 GVYIKQVVL-C-KFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLSGHNCSQ 233
Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLG---SGSIRNEIEPSPVRCLVSE-VTATACGA 170
A + HTVV+TEDG FG N QLG S N + L + A G
Sbjct: 234 VAAAKDHTVVLTEDGCVYTFGLNIFHQLGIIPPPSNCNVPRQMQAKYLKGRTIIGVAAGR 293
Query: 171 DFTV-WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
TV W ++ GL GQLGH D S K PR ++AL +
Sbjct: 294 FHTVLWTRE----AVYTLGL-NGGQLGHLLD------PSGEKCV----TAPRQVSALHHK 338
Query: 230 TIVK--VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE 287
I VA TV V ++G +Y +L ++ + V V + PE
Sbjct: 339 DIALSLVAASDGATVCVTARGDIYLLADYQCKKLASKQLNLKKV--LVSGGHMEYKVDPE 396
Query: 288 AVISAGSVNSSCTA--GGGQLYMWGKLKNNGDD--WMYPK 323
+ G A G G+++ W ++ W YP+
Sbjct: 397 HLKENGGQKICILAMDGAGRVFCWRSASSSLKQCRWAYPR 436
Score = 123 (48.4 bits), Expect = 0.00055, P = 0.00054
Identities = 43/158 (27%), Positives = 74/158 (46%)
Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
VYTWG LGH Q + P VD+F R+ V + V+ +S + GQ+Y
Sbjct: 144 VYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGVYIKQVVLC--KFHSVFLSQKGQVYTC 201
Query: 310 GK----LKNNGDDW--MYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGEL 362
G +GD+ + P+ + LSG N + + H V + C+ ++G + +L
Sbjct: 202 GHGPGGRLGHGDEQTCLVPRLVEGLSGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQL 261
Query: 363 GYGPYGQKSSAMPKKVDI--LEGMHVISVACGYGHSLV 398
G P + +P+++ L+G +I VA G H+++
Sbjct: 262 GIIPPPSNCN-VPRQMQAKYLKGRTIIGVAAGRFHTVL 298
>ASPGD|ASPL0000064315 [details] [associations]
symbol:rcc1 species:162425 "Emericella nidulans"
[GO:0000790 "nuclear chromatin" evidence=IDA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0006406
"mRNA export from nucleus" evidence=IEA] [GO:0006407 "rRNA export
from nucleus" evidence=IEA] [GO:0000054 "ribosomal subunit export
from nucleus" evidence=IEA] [GO:0031291 "Ran protein signal
transduction" evidence=IEA] [GO:0042992 "negative regulation of
transcription factor import into nucleus" evidence=IEA] [GO:1901673
"regulation of spindle assembly involved in mitosis" evidence=IEA]
[GO:0060623 "regulation of chromosome condensation" evidence=IEA]
[GO:0007093 "mitotic cell cycle checkpoint" evidence=IEA]
[GO:0030071 "regulation of mitotic metaphase/anaphase transition"
evidence=IEA] [GO:0032888 "regulation of mitotic spindle
elongation" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 EMBL:BN001304
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AACD01000117 eggNOG:COG5184 OMA:PFEAIWA HOGENOM:HOG000170207
OrthoDB:EOG466ZVF RefSeq:XP_664582.1 ProteinModelPortal:Q5AXK2
STRING:Q5AXK2 EnsemblFungi:CADANIAT00000503 GeneID:2870170
KEGG:ani:AN6978.2 Uniprot:Q5AXK2
Length = 533
Score = 164 (62.8 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 63/251 (25%), Positives = 109/251 (43%)
Query: 30 WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVA-AGCVSCHCVAVDVEGRCYTWGRNERG 88
W G L + + + P + D++ + C H +A++ +G +WG ++
Sbjct: 255 WGTFRSNDGILGFDAKTKVQTTPKLLPDLKKIKHLVCGDNHVLALNDKGAVLSWGSGQQN 314
Query: 89 QLGHGDKIQRDRPTIVS--ELSKYK-IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-- 143
QLG I+R++ + E K I GAG H+ V + G A+G N G+ G
Sbjct: 315 QLGRRI-IERNKLNGLQPREFGLPKGIVHIGAGAFHSFAVHQSGKVFAWGLNSFGETGIR 373
Query: 144 --SGSIRNEI-EPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTD 200
+G I P+ V L + CG ++ +G ++ L Y Q G D
Sbjct: 374 ENAGDSEAAIVHPTVVDSLSKKNVTQICGGAHHSIAATQDGECLVWGRLDGY-QTGLKID 432
Query: 201 NEYNTKDSSVKLAYEAQPRPRAI---AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
+ D+ +K + + RPR + A+ G VA G++H++A+D+ G ++WGF
Sbjct: 433 TLPD--DAVIK---DERDRPRILIEPTAVPGIKAKAVAAGSDHSIAIDTSGRPWSWGFSA 487
Query: 258 YGRLGHREQKD 268
+ G Q D
Sbjct: 488 TYQTGQGTQDD 498
Score = 142 (55.0 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 74/272 (27%), Positives = 116/272 (42%)
Query: 55 GVDIRFVAAGCVSCHCVAVDVEGRCYTWG--RNERGQLGHGDKIQ-RDRPTIVSELSKYK 111
G I VAAG S A+ EG+ Y WG R+ G LG K + + P ++ +L K
Sbjct: 230 GTVIVEVAAGDSSSF--ALTDEGQVYGWGTFRSNDGILGFDAKTKVQTTPKLLPDLKK-- 285
Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI-RNEIEPSPVR--CLVSEVTATAC 168
IK G +H + + + G L++G + QLG I RN++ R L +
Sbjct: 286 IKHLVCGDNHVLALNDKGAVLSWGSGQQNQLGRRIIERNKLNGLQPREFGLPKGIVHIGA 345
Query: 169 GADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAG 228
GA F + G + GL +G+ G E N DS + + P + +L+
Sbjct: 346 GA-FHSFAVHQSG-KVFAWGLNSFGETGI---RE-NAGDSEAAIVH-----PTVVDSLSK 394
Query: 229 ETIVKVACGTNHTVAVDSKGYVYTWG-FGGYGR-LGHREQKDEWVPRRVDVFQRNNVL-P 285
+ + ++ G +H++A G WG GY L D+ V + D R +L
Sbjct: 395 KNVTQICGGAHHSIAATQDGECLVWGRLDGYQTGLKIDTLPDDAVIK--DERDRPRILIE 452
Query: 286 PEAV-------ISAGSVNSSCTAGGGQLYMWG 310
P AV ++AGS +S G+ + WG
Sbjct: 453 PTAVPGIKAKAVAAGSDHSIAIDTSGRPWSWG 484
Score = 132 (51.5 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 64/240 (26%), Positives = 104/240 (43%)
Query: 154 SPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQL-GHGTDNEYNTKDSSVKL 212
+P C + + ++A TV + G S A L GQ+ G GT + + D L
Sbjct: 213 NPHECTPTAIPSSAFPHG-TVIVEVAAGDSSSFA-LTDEGQVYGWGT---FRSNDGI--L 265
Query: 213 AYEAQPRPRAIAALAGET--IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
++A+ + + L + I + CG NH +A++ KG V +WG G +LG R +
Sbjct: 266 GFDAKTKVQTTPKLLPDLKKIKHLVCGDNHVLALNDKGAVLSWGSGQQNQLGRRIIERN- 324
Query: 271 VPRRVDVFQ-RNNVLPPEAV-ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDW-- 319
+++ Q R LP V I AG+ +S G+++ WG ++ N D
Sbjct: 325 ---KLNGLQPREFGLPKGIVHIGAGAFHSFAVHQSGKVFAWGLNSFGETGIRENAGDSEA 381
Query: 320 --MYPKPLMDLSGWNLRCMDSGNMHHFVGA--DSSCISWGHAQYGELGYGPYGQKSSAMP 375
++P + LS N+ + G HH + A D C+ WG GY G K +P
Sbjct: 382 AIVHPTVVDSLSKKNVTQI-CGGAHHSIAATQDGECLVWGRLD----GYQT-GLKIDTLP 435
Score = 82 (33.9 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 23/67 (34%), Positives = 33/67 (49%)
Query: 26 GSTCWDAVGRRKGALDGNLVSPTRLRP-LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGR 84
GS+ +G K +D V RL P L+ D+ V HCVA+ + + TWG
Sbjct: 118 GSSGELGLGVGKNVID---VKRPRLNPHLLPDDVGVVQVAVGGMHCVALTHDNKVLTWGV 174
Query: 85 NERGQLG 91
N++G LG
Sbjct: 175 NDQGALG 181
Score = 69 (29.3 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 21/69 (30%), Positives = 28/69 (40%)
Query: 80 YTWGRNERGQLGHG---DKIQRDRPTIVSEL--SKYKIKKAGAGRSHTVVVTEDGNSLAF 134
Y G G+LG G + I RP + L + + G H V +T D L +
Sbjct: 113 YVCGEGSSGELGLGVGKNVIDVKRPRLNPHLLPDDVGVVQVAVGGMHCVALTHDNKVLTW 172
Query: 135 GWNKHGQLG 143
G N G LG
Sbjct: 173 GVNDQGALG 181
>UNIPROTKB|F1MMV0 [details] [associations]
symbol:IBTK "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051209 "release of sequestered calcium ion into
cytosol" evidence=IEA] [GO:0030292 "protein tyrosine kinase
inhibitor activity" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0051209
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS50012 GO:GO:0030292 OMA:VSALHHK
GeneTree:ENSGT00700000104160 EMBL:DAAA02025482 EMBL:DAAA02025483
IPI:IPI00708608 Ensembl:ENSBTAT00000038116 Uniprot:F1MMV0
Length = 1353
Score = 171 (65.3 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 66/236 (27%), Positives = 101/236 (42%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSK--YKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
YTWG N LGHG + + P +V S+ IK+ + H+V +++ G G
Sbjct: 145 YTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHG 204
Query: 138 KHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
G+LG G + + P V L + A D TV L+ E + GL + QLG
Sbjct: 205 PGGRLGHGDEQTCLVPRLVEGLSGHNCSQVAAAKDHTVVLT--EDGCVYTFGLNIFHQLG 262
Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
SS + PR L G TI+ VA G HTV + ++ VYT G
Sbjct: 263 ------LIPPPSSCNV-----PRQMQAKYLKGRTIIGVAAGRFHTV-LWTREAVYTMGLN 310
Query: 257 GYGRLGH----REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
G G+LG+ +K PR+V ++ ++++A + C G +Y+
Sbjct: 311 G-GQLGYLLDPNGEKCVTAPRQVSALHHKDITL--SLVAASDGATVCVTTKGDIYL 363
Score = 160 (61.4 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 76/280 (27%), Positives = 113/280 (40%)
Query: 55 GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK 114
G+ I+ V C H V + +G+ YT G G+LGHGD+ P +V LS + +
Sbjct: 176 GIYIKQVVL-C-KFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLSGHNCSQ 233
Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLG---SGSIRNEIEPSPVRCLVSE-VTATACGA 170
A + HTVV+TEDG FG N QLG S N + L + A G
Sbjct: 234 VAAAKDHTVVLTEDGCVYTFGLNIFHQLGLIPPPSSCNVPRQMQAKYLKGRTIIGVAAGR 293
Query: 171 DFTV-WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
TV W ++ GL GQLG+ D + PR ++AL +
Sbjct: 294 FHTVLWTRE----AVYTMGL-NGGQLGYLLDPN----------GEKCVTAPRQVSALHHK 338
Query: 230 --TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE 287
T+ VA TV V +KG +Y +L ++ + V V + PE
Sbjct: 339 DITLSLVAASDGATVCVTTKGDIYLLADYQCKKLASKQLNLKKV--LVSGGHMEYKVDPE 396
Query: 288 AVISAGSVNSSCTA--GGGQLYMWGKLKNNGDD--WMYPK 323
+ G A G G+++ W + ++ W YP+
Sbjct: 397 HLKENGGQKICILAMDGAGRVFCWRSVNSSMKQCRWAYPR 436
Score = 125 (49.1 bits), Expect = 0.00033, P = 0.00033
Identities = 43/158 (27%), Positives = 74/158 (46%)
Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
VYTWG LGH Q + P VD+F R+ + + V+ +S + GQ+Y
Sbjct: 144 VYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLC--KFHSVFLSQKGQVYTC 201
Query: 310 GK----LKNNGDDW--MYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGEL 362
G +GD+ + P+ + LSG N + + H V + C+ ++G + +L
Sbjct: 202 GHGPGGRLGHGDEQTCLVPRLVEGLSGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQL 261
Query: 363 GYGPYGQKSSAMPKKVDI--LEGMHVISVACGYGHSLV 398
G P S +P+++ L+G +I VA G H+++
Sbjct: 262 GLIP-PPSSCNVPRQMQAKYLKGRTIIGVAAGRFHTVL 298
>RGD|1312048 [details] [associations]
symbol:Mycbp2 "MYC binding protein 2, E3 ubiquitin protein
ligase" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0008045
"motor neuron axon guidance" evidence=ISO] [GO:0015630 "microtubule
cytoskeleton" evidence=ISO] [GO:0021785 "branchiomotor neuron axon
guidance" evidence=ISO] [GO:0021952 "central nervous system
projection neuron axonogenesis" evidence=ISO] [GO:0030424 "axon"
evidence=ISO] [GO:0032880 "regulation of protein localization"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] [GO:0048667 "cell morphogenesis involved in neuron
differentiation" evidence=ISO] [GO:0051493 "regulation of
cytoskeleton organization" evidence=ISO] InterPro:IPR027047
RGD:1312048 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 InterPro:IPR014756 SUPFAM:SSF81296 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194 EMBL:CH473951
PANTHER:PTHR12846 IPI:IPI00950595 UniGene:Rn.13538
Ensembl:ENSRNOT00000064927 UCSC:RGD:1312048 Uniprot:D4A722
Length = 2667
Score = 150 (57.9 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 43/116 (37%), Positives = 55/116 (47%)
Query: 31 DAVGRRKGALDGNLVS---PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNER 87
DA G R G D + V+ P +R ++R V C H V + G YT+G +
Sbjct: 889 DASGER-GEKDASKVTTYPPGSVR--FDCEVRAVQVSCGFHHSVVLMENGDVYTFGYGQH 945
Query: 88 GQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG 143
GQLGHGD R PT+V L + AG +HT V+ DG FG GQLG
Sbjct: 946 GQLGHGDVNSRGCPTLVQALPGPSTQVT-AGSNHTAVLVMDGQVFTFGSFSKGQLG 1000
Score = 136 (52.9 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 38/134 (28%), Positives = 64/134 (47%)
Query: 202 EYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRL 261
E KD+S Y P P ++ V+V+CG +H+V + G VYT+G+G +G+L
Sbjct: 893 ERGEKDASKVTTY---P-PGSVRFDCEVRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQL 948
Query: 262 GHREQKDEWVPRRVDVFQRNNVLP-PEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWM 320
GH + P V LP P ++AGS +++ GQ++ +G
Sbjct: 949 GHGDVNSRGCPTLVQA------LPGPSTQVTAGSNHTAVLVMDGQVFTFGSFSKG----Q 998
Query: 321 YPKPLMDLSGWNLR 334
+P++D+ WN +
Sbjct: 999 LGRPILDVPYWNAK 1012
Score = 90 (36.7 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 24/100 (24%), Positives = 48/100 (48%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCH---CVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTI 103
P + + ++ ++ + V C +C+ + +G Y +G+ D I D ++
Sbjct: 602 PYKPKKIIKMEGKIVV--CTACNNGSSSVISKDGELYMFGK---------DAIYSDSSSL 650
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG 143
VS+L + + + G++HT V+ ++G FG N GQ G
Sbjct: 651 VSDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 690
Score = 38 (18.4 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 7/13 (53%), Positives = 12/13 (92%)
Query: 159 LVSEVTATACGAD 171
+VSE+TA+A G++
Sbjct: 1667 IVSELTASALGSE 1679
Score = 37 (18.1 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 14/64 (21%), Positives = 28/64 (43%)
Query: 197 HGTDNEYNTKDSSVKLA---YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
H D+ ++ + +S++L Y P IA + + +V + + V + + G
Sbjct: 1751 HSGDSTHSHRWTSLELVKGTYTTDDSPSDIAEIRLDKVVPLKENVKYAVRLRNYGSRTAN 1810
Query: 254 GFGG 257
G GG
Sbjct: 1811 GDGG 1814
Score = 37 (18.1 bits), Expect = 0.00097, Sum P(2) = 0.00097
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 78 RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
R YT ++R Q G R + L+K K+K+ +S
Sbjct: 79 RIYTTALSDRDQAGSSTGYPASRNKKI--LNKKKLKRKQKSKS 119
>UNIPROTKB|Q83CB0 [details] [associations]
symbol:CBU_1217 "Hypothetical membrane spanning protein"
species:227377 "Coxiella burnetii RSA 493" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE016828
GenomeReviews:AE016828_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 OMA:GYIYAWG
RefSeq:NP_820212.1 ProteinModelPortal:Q83CB0 GeneID:1209121
KEGG:cbu:CBU_1217 PATRIC:17931169 HOGENOM:HOG000029001
ProtClustDB:CLSK914618 BioCyc:CBUR227377:GJ7S-1203-MONOMER
Uniprot:Q83CB0
Length = 497
Score = 164 (62.8 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 76/289 (26%), Positives = 122/289 (42%)
Query: 102 TIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS------- 154
TIV LS Y+ H ++TE+G +G+N G+LG G +P+
Sbjct: 179 TIVQLLSDYR---------HAFILTEEGGIYGWGFNISGELGLGDRFERSQPTELPQNFF 229
Query: 155 PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
P + AD + + +G + G G+LG D+E + + V+L++
Sbjct: 230 PYLLERGDRIVQLNFADRYLVARTAQG-HVYVWGFNYRGRLG--LDDEQD-RLHPVELSW 285
Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP-- 272
+ P + I++V G HT+A+ GY+Y WG YG+LG R+Q+D P
Sbjct: 286 DFFPEWHP-----DDYIIQVVVGDRHTLALTQLGYIYAWGKNSYGQLGFRDQQDRNRPAL 340
Query: 273 ----RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK--LKNNGDDWMYPKPLM 326
R + +RN+ + E + AG S G +Y+WG L GD P++
Sbjct: 341 LPWNRFPGLLERNDRII-ELI--AGGARSLARTEQGFIYIWGARWLLVRGDPEFRHHPML 397
Query: 327 DLSGW--NLRC-------MDSGNMHHFVGADSSCI-SWGHAQYGELGYG 365
+ LR + +G H + I +WG YG+LG G
Sbjct: 398 LTENYFPGLRRRGDHLVELIAGPDHTLARTEQGYIYAWGRNYYGQLGLG 446
Score = 126 (49.4 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 60/246 (24%), Positives = 99/246 (40%)
Query: 82 WGRNERGQLGHGDKIQRDRP------TIVSELSK--YKIKKAGA----GRSHTVVVTEDG 129
WG N GQL G+ + +P + + E++ Y ++ A A G++ ++V T G
Sbjct: 92 WGNNYTGQLDFGNIHEMTKPARIPLDSFIPEMAPDDYVVQFASADFLSGKARSLVATRQG 151
Query: 130 NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGL 189
+ W + S I++ R VT +D+ E I G
Sbjct: 152 QLHEYYWERISNTRSEFIQH-------RHYELNVTIVQLLSDYRHAFILTEEGGIYGWGF 204
Query: 190 PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGY 249
G+LG G E + +L P G+ IV++ + VA ++G+
Sbjct: 205 NISGELGLGDRFE---RSQPTELPQNFFP----YLLERGDRIVQLNFADRYLVARTAQGH 257
Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRV--DVFQRNNVLPPEAVISA--GSVNSSCTAGGGQ 305
VY WGF GRLG +++D P + D F + P + +I G ++ G
Sbjct: 258 VYVWGFNYRGRLGLDDEQDRLHPVELSWDFFPEWH--PDDYIIQVVVGDRHTLALTQLGY 315
Query: 306 LYMWGK 311
+Y WGK
Sbjct: 316 IYAWGK 321
Score = 103 (41.3 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 31/92 (33%), Positives = 42/92 (45%)
Query: 59 RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-------ELSKYK 111
R V + VA +G Y WG N RG+LG D+ R P +S Y
Sbjct: 238 RIVQLNFADRYLVARTAQGHVYVWGFNYRGRLGLDDEQDRLHPVELSWDFFPEWHPDDYI 297
Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG 143
I+ G HT+ +T+ G A+G N +GQLG
Sbjct: 298 IQVV-VGDRHTLALTQLGYIYAWGKNSYGQLG 328
Score = 102 (41.0 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 20/59 (33%), Positives = 35/59 (59%)
Query: 228 GETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
G+ +V++ G +HT+A +GY+Y WG YG+LG +++ + P +D N +PP
Sbjct: 410 GDHLVELIAGPDHTLARTEQGYIYAWGRNYYGQLGLGDRRIQRQPALLDP----NAIPP 464
>TIGR_CMR|CBU_1217 [details] [associations]
symbol:CBU_1217 "hypothetical protein" species:227377
"Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] INTERPRO:IPR000408
Pfam:PF00415 EMBL:AE016828 GenomeReviews:AE016828_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 OMA:GYIYAWG RefSeq:NP_820212.1
ProteinModelPortal:Q83CB0 GeneID:1209121 KEGG:cbu:CBU_1217
PATRIC:17931169 HOGENOM:HOG000029001 ProtClustDB:CLSK914618
BioCyc:CBUR227377:GJ7S-1203-MONOMER Uniprot:Q83CB0
Length = 497
Score = 164 (62.8 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 76/289 (26%), Positives = 122/289 (42%)
Query: 102 TIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS------- 154
TIV LS Y+ H ++TE+G +G+N G+LG G +P+
Sbjct: 179 TIVQLLSDYR---------HAFILTEEGGIYGWGFNISGELGLGDRFERSQPTELPQNFF 229
Query: 155 PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
P + AD + + +G + G G+LG D+E + + V+L++
Sbjct: 230 PYLLERGDRIVQLNFADRYLVARTAQG-HVYVWGFNYRGRLG--LDDEQD-RLHPVELSW 285
Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP-- 272
+ P + I++V G HT+A+ GY+Y WG YG+LG R+Q+D P
Sbjct: 286 DFFPEWHP-----DDYIIQVVVGDRHTLALTQLGYIYAWGKNSYGQLGFRDQQDRNRPAL 340
Query: 273 ----RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK--LKNNGDDWMYPKPLM 326
R + +RN+ + E + AG S G +Y+WG L GD P++
Sbjct: 341 LPWNRFPGLLERNDRII-ELI--AGGARSLARTEQGFIYIWGARWLLVRGDPEFRHHPML 397
Query: 327 DLSGW--NLRC-------MDSGNMHHFVGADSSCI-SWGHAQYGELGYG 365
+ LR + +G H + I +WG YG+LG G
Sbjct: 398 LTENYFPGLRRRGDHLVELIAGPDHTLARTEQGYIYAWGRNYYGQLGLG 446
Score = 126 (49.4 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 60/246 (24%), Positives = 99/246 (40%)
Query: 82 WGRNERGQLGHGDKIQRDRP------TIVSELSK--YKIKKAGA----GRSHTVVVTEDG 129
WG N GQL G+ + +P + + E++ Y ++ A A G++ ++V T G
Sbjct: 92 WGNNYTGQLDFGNIHEMTKPARIPLDSFIPEMAPDDYVVQFASADFLSGKARSLVATRQG 151
Query: 130 NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGL 189
+ W + S I++ R VT +D+ E I G
Sbjct: 152 QLHEYYWERISNTRSEFIQH-------RHYELNVTIVQLLSDYRHAFILTEEGGIYGWGF 204
Query: 190 PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGY 249
G+LG G E + +L P G+ IV++ + VA ++G+
Sbjct: 205 NISGELGLGDRFE---RSQPTELPQNFFP----YLLERGDRIVQLNFADRYLVARTAQGH 257
Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRV--DVFQRNNVLPPEAVISA--GSVNSSCTAGGGQ 305
VY WGF GRLG +++D P + D F + P + +I G ++ G
Sbjct: 258 VYVWGFNYRGRLGLDDEQDRLHPVELSWDFFPEWH--PDDYIIQVVVGDRHTLALTQLGY 315
Query: 306 LYMWGK 311
+Y WGK
Sbjct: 316 IYAWGK 321
Score = 103 (41.3 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 31/92 (33%), Positives = 42/92 (45%)
Query: 59 RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-------ELSKYK 111
R V + VA +G Y WG N RG+LG D+ R P +S Y
Sbjct: 238 RIVQLNFADRYLVARTAQGHVYVWGFNYRGRLGLDDEQDRLHPVELSWDFFPEWHPDDYI 297
Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG 143
I+ G HT+ +T+ G A+G N +GQLG
Sbjct: 298 IQVV-VGDRHTLALTQLGYIYAWGKNSYGQLG 328
Score = 102 (41.0 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 20/59 (33%), Positives = 35/59 (59%)
Query: 228 GETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
G+ +V++ G +HT+A +GY+Y WG YG+LG +++ + P +D N +PP
Sbjct: 410 GDHLVELIAGPDHTLARTEQGYIYAWGRNYYGQLGLGDRRIQRQPALLDP----NAIPP 464
>UNIPROTKB|C9JQZ4 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 IPI:IPI00925791
ProteinModelPortal:C9JQZ4 SMR:C9JQZ4 STRING:C9JQZ4
Ensembl:ENST00000430407 ArrayExpress:C9JQZ4 Bgee:C9JQZ4
Uniprot:C9JQZ4
Length = 283
Score = 158 (60.7 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 61/233 (26%), Positives = 102/233 (43%)
Query: 49 RLRP-LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR--PTIVS 105
R +P LV + V A H V + G+ Y++G N+ G LG ++ P V
Sbjct: 57 RKKPALVSIPEDVVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKV- 115
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW--NKHGQLGS-GSIRNEIEPSPVRCLVSE 162
EL + K+ + AG SHT +T+DG +G + +G +G ++ + P V+ V
Sbjct: 116 ELQE-KVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDVP- 173
Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
V A G D V L++ +G + G + GQLG + + L P+
Sbjct: 174 VVKVASGNDHLVMLTA-DG-DLYTLGCGEQGQLGR-VPELFANRGGRQGLERLLVPKCVM 230
Query: 223 IAALAGETIVKVA---CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
+ + V+ CG T A+ +G+VY +G Y +LG + ++P
Sbjct: 231 LKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIP 283
Score = 144 (55.7 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 55/189 (29%), Positives = 86/189 (45%)
Query: 77 GRCYTWGRNERGQLGHGDKI-QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G T G+ + GQLG G+ + +R +P +VS + +A AG HTV +++ G +FG
Sbjct: 35 GLVLTLGQGDVGQLGLGENVMERKKPALVS--IPEDVVQAEAGGMHTVCLSKSGQVYSFG 92
Query: 136 WNKHGQLGSG-SIR-NEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
N G LG S+ +E+ P V L +V + G T L+ +G L +G
Sbjct: 93 CNDEGALGRDTSVEGSEMVPGKVE-LQEKVVQVSAGDSHTAALTD-DGRVFL------WG 144
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
DN + + L + + +VKVA G +H V + + G +YT
Sbjct: 145 SF---RDN-----NGVIGLLEPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTADGDLYTL 196
Query: 254 GFGGYGRLG 262
G G G+LG
Sbjct: 197 GCGEQGQLG 205
>UNIPROTKB|Q96I51 [details] [associations]
symbol:WBSCR16 "Williams-Beuren syndrome chromosomal region
16 protein" species:9606 "Homo sapiens" [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 Orphanet:904 MIM:194050
EMBL:AF410455 EMBL:AL136804 EMBL:CH471292 EMBL:BC007823
EMBL:BC019008 IPI:IPI00305992 RefSeq:NP_110425.1 UniGene:Hs.723684
ProteinModelPortal:Q96I51 SMR:Q96I51 IntAct:Q96I51 STRING:Q96I51
PhosphoSite:Q96I51 DMDM:116242843 PaxDb:Q96I51 PeptideAtlas:Q96I51
PRIDE:Q96I51 DNASU:81554 Ensembl:ENST00000329959 GeneID:81554
KEGG:hsa:81554 UCSC:uc003ubr.3 CTD:81554 GeneCards:GC07M074456
HGNC:HGNC:14948 neXtProt:NX_Q96I51 PharmGKB:PA37941
HOGENOM:HOG000232125 HOVERGEN:HBG054246 InParanoid:Q96I51
OMA:MVTLAKS OrthoDB:EOG4F1X33 PhylomeDB:Q96I51 ChiTaRS:WBSCR16
GenomeRNAi:81554 NextBio:71806 ArrayExpress:Q96I51 Bgee:Q96I51
CleanEx:HS_WBSCR16 Genevestigator:Q96I51 GermOnline:ENSG00000174374
Uniprot:Q96I51
Length = 464
Score = 163 (62.4 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 99/401 (24%), Positives = 160/401 (39%)
Query: 34 GRRKGALDGNLVSPTRLRPLVGVDIRFVAAGC----VSCHCVAVDVEGRCYTWGRNERGQ 89
G R GA + P R + +D + +A C DV + + G N+ Q
Sbjct: 85 GPRAGARPRRRIQPVPYR--LELDQKISSAACGYGFTLLSSKTADVT-KVWGMGLNKDSQ 141
Query: 90 LG-HGDKIQRDR-------PTIVS-ELSK---YKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
LG H + + R P+ VS L + ++ + GR+H++V+T+ + G N
Sbjct: 142 LGFHRSRKDKTRGYEYVLEPSPVSLPLDRPQETRVLQVSCGRAHSLVLTDREGVFSMGNN 201
Query: 138 KHGQLGSGSIRNEI--EPSPVRCLVS---EVTATACGADFTVWLSSVEGASILNAGLPQY 192
+GQ G + NEI E V + +V ACG D +++L+ +G + + G
Sbjct: 202 SYGQCGRKVVENEIYSESHRVHRMQDFDGQVVQVACGQDHSLFLTD-KG-EVYSCGWGAD 259
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
GQ G G YN S KL + LAG +++VA + +AV + G ++
Sbjct: 260 GQTGLG---HYNITSSPTKLGGD----------LAGVNVIQVATYGDCCLAVSADGGLFG 306
Query: 253 WGFGGYGRLGHREQKDEW-VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG- 310
WG Y +L + VPR + V +A + G + G G +++WG
Sbjct: 307 WGNSEYLQLASVTDSTQVNVPRCLHFSGVGKVR--QA--ACGGTGCAVLNGEGHVFVWGY 362
Query: 311 -------KLKNNGDDWMYPKPLMDLSGWNLRCMDSG---NMHHFVGADSS--CISWGHAQ 358
L + M P L L+ +N S + HF + WG
Sbjct: 363 GILGKGPNLVESAVPEMIPPTLFGLTEFNPEIQVSRIRCGLSHFAALTNKGELFVWGKNI 422
Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G LG G + P +V + G + VACG H + +
Sbjct: 423 RGCLGIGRL--EDQYFPWRVT-MPG-EPVDVACGVDHMVTL 459
Score = 150 (57.9 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 65/257 (25%), Positives = 106/257 (41%)
Query: 26 GSTCWDAVGRRKGALDGNLVSPT-RLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGR 84
G+ + GR+ ++ + S + R+ + D + V C H + + +G Y+ G
Sbjct: 199 GNNSYGQCGRK--VVENEIYSESHRVHRMQDFDGQVVQVACGQDHSLFLTDKGEVYSCGW 256
Query: 85 NERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG 143
GQ G G PT + +L+ + + + V+ DG FGW L
Sbjct: 257 GADGQTGLGHYNITSSPTKLGGDLAGVNVIQVATYGDCCLAVSADGG--LFGWGNSEYLQ 314
Query: 144 SGSIRNEIEPSPVRCL----VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
S+ + + + RCL V +V ACG L+ EG + G YG LG G
Sbjct: 315 LASVTDSTQVNVPRCLHFSGVGKVRQAACGGTGCAVLNG-EG-HVFVWG---YGILGKGP 369
Query: 200 DNEYNTKDSSVKLAYEAQPRPRAIAALAGETIV-KVACGTNHTVAVDSKGYVYTWGFGGY 258
N +S+V P + E V ++ CG +H A+ +KG ++ WG
Sbjct: 370 ----NLVESAVPEMIP--PTLFGLTEFNPEIQVSRIRCGLSHFAALTNKGELFVWGKNIR 423
Query: 259 GRLGHREQKDEWVPRRV 275
G LG +D++ P RV
Sbjct: 424 GCLGIGRLEDQYFPWRV 440
>UNIPROTKB|F1NXV1 [details] [associations]
symbol:IBTK "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=IEA] [GO:0051209 "release of sequestered calcium ion into
cytosol" evidence=IEA] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 GO:GO:0051209 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GO:GO:0030292 OMA:VSALHHK
GeneTree:ENSGT00700000104160 EMBL:AADN02002424 EMBL:AADN02002425
IPI:IPI00590269 Ensembl:ENSGALT00000025575 Uniprot:F1NXV1
Length = 1359
Score = 168 (64.2 bits), Expect = 6.5e-09, P = 6.5e-09
Identities = 67/236 (28%), Positives = 101/236 (42%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYK--IKKAGAGRSHTVVVTEDGNSLAFGWN 137
YTWG N LGHG + + P +V + IK+ + H+V ++ G G
Sbjct: 148 YTWGNNINFTLGHGGQQSKHHPELVDLFPRNSVYIKQVVLCKFHSVFLSHKGQIYTCGHG 207
Query: 138 KHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
+ G+LG G + + P V L S + + A D TV L+ E + GL + QLG
Sbjct: 208 QGGRLGHGDEQTCLVPRLVEGLSSHQCSQIAAAKDHTVVLT--EDGCVYTFGLNTFHQLG 265
Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
+ SV PR L G ++ VA G HTV + +K VYT G
Sbjct: 266 ILPP----PANCSV-------PRQVQAKNLKGRMVIGVAAGRFHTV-LWTKEAVYTMGLN 313
Query: 257 GYGRLGH----REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
G G+LG+ +K PR+V +V +++SA + C G +Y+
Sbjct: 314 G-GQLGYLLDPNGEKCVTAPRQVSALHHKDV--SVSLVSASDGATVCVTERGDIYL 366
Score = 154 (59.3 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 53/186 (28%), Positives = 82/186 (44%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H V + +G+ YT G + G+LGHGD+ P +V LS ++ + A + HTVV+TED
Sbjct: 191 HSVFLSHKGQIYTCGHGQGGRLGHGDEQTCLVPRLVEGLSSHQCSQIAAAKDHTVVLTED 250
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNA 187
G FG N QLG I P P C V +V A + +++ ++L
Sbjct: 251 GCVYTFGLNTFHQLG-------ILPPPANCSVPRQVQAKNLKGRMVIGVAAGRFHTVLWT 303
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE--TIVKVACGTNHTVAVD 245
Y +G Y + K PR ++AL + ++ V+ TV V
Sbjct: 304 KEAVYTMGLNGGQLGYLLDPNGEKCV----TAPRQVSALHHKDVSVSLVSASDGATVCVT 359
Query: 246 SKGYVY 251
+G +Y
Sbjct: 360 ERGDIY 365
Score = 123 (48.4 bits), Expect = 0.00055, P = 0.00055
Identities = 45/158 (28%), Positives = 75/158 (47%)
Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
VYTWG LGH Q+ + P VD+F RN+V + V+ +S + GQ+Y
Sbjct: 147 VYTWGNNINFTLGHGGQQSKHHPELVDLFPRNSVYIKQVVLC--KFHSVFLSHKGQIYTC 204
Query: 310 GKLKN----NGDDW--MYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGEL 362
G + +GD+ + P+ + LS + + H V + C+ ++G + +L
Sbjct: 205 GHGQGGRLGHGDEQTCLVPRLVEGLSSHQCSQIAAAKDHTVVLTEDGCVYTFGLNTFHQL 264
Query: 363 GYGPYGQKSSAMPKKVDI--LEGMHVISVACGYGHSLV 398
G P S +P++V L+G VI VA G H+++
Sbjct: 265 GILPPPANCS-VPRQVQAKNLKGRMVIGVAAGRFHTVL 301
>UNIPROTKB|F1NXI7 [details] [associations]
symbol:SERGEF "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0050709 "negative regulation of protein
secretion" evidence=IEA] InterPro:IPR027048 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104160 PANTHER:PTHR22870:SF7
EMBL:AADN02030419 EMBL:AADN02030421 EMBL:AADN02030420
IPI:IPI00587804 Ensembl:ENSGALT00000010065 Uniprot:F1NXI7
Length = 231
Score = 152 (58.6 bits), Expect = 7.7e-09, P = 7.7e-09
Identities = 58/195 (29%), Positives = 81/195 (41%)
Query: 66 VSCHCVAVDVEGRCYTW-GRNERGQLGHGDKIQRDRPTIVSELS-KYK-IKKAGAGRSHT 122
++CH + + C G N GQLG G K P ++ ++S K + IK G H+
Sbjct: 4 IACHSHLI-LRATCVCLKGANSYGQLGLGHKEDVLVPQLLKDVSCKCQDIKSIAGGGGHS 62
Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEG 181
V+T G G NK GQLG + + + L V ACG DFT+ L
Sbjct: 63 AVITGAGELFVCGHNKAGQLGLNHTEDVLCFTLCTALSGFCVQEVACGWDFTIILG--RA 120
Query: 182 ASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHT 241
+L+ G +GQLG + S L P+ I E V +A G H
Sbjct: 121 GLVLSCGSNAFGQLGV-------PQISGPCLI------PQKIKQSLKEKAVGIAAGLRHA 167
Query: 242 VAVDSKGYVYTWGFG 256
+A G V+ WG G
Sbjct: 168 LAATESGLVFQWGTG 182
>ZFIN|ZDB-GENE-080929-1 [details] [associations]
symbol:als2b "amyotrophic lateral sclerosis 2b
(juvenile)" species:7955 "Danio rerio" [GO:0035023 "regulation of
Rho protein signal transduction" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005089 "Rho guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005543 "phospholipid
binding" evidence=IEA] InterPro:IPR000219 InterPro:IPR001849
Pfam:PF00621 PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408
Pfam:PF00415 Pfam:PF02204 ZFIN:ZDB-GENE-080929-1 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622 GO:GO:0005089
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
GeneTree:ENSGT00600000084242 KO:K04575 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 EMBL:CU570787 EMBL:BX927225
EMBL:CU915284 IPI:IPI01024580 RefSeq:XP_002662342.2
UniGene:Dr.158633 Ensembl:ENSDART00000149896 GeneID:100318899
KEGG:dre:100318899 CTD:100318899 Uniprot:F8W4K3
Length = 1681
Score = 140 (54.3 bits), Expect = 9.8e-06, P = 9.8e-06
Identities = 39/115 (33%), Positives = 60/115 (52%)
Query: 36 RKGALDGNL--VSPTRLRPLVGVDIRFV--AAGCV---SCHCVAVDVEGRCYTWGRNERG 88
R+ +L G L VSP LR +R V A+G + H ++ E ++WG+ + G
Sbjct: 503 RRLSLPGLLSQVSPRLLRRTSRPRMRAVPLASGGIPETDAHLPSLQTE--VWSWGQGQDG 560
Query: 89 QLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG 143
QLGHGD + R +P V L+ ++ K AG H++ +T ++G N GQLG
Sbjct: 561 QLGHGDLLPRLQPDCVKSLNGKEVLKVAAGAHHSLALTAQSQVFSWGCNTSGQLG 615
Score = 133 (51.9 bits), Expect = 9.5e-09, Sum P(2) = 9.5e-09
Identities = 54/184 (29%), Positives = 83/184 (45%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H V + G+ Y++G Q ++ P + + LS+ ++ AG +H+ VVTED
Sbjct: 49 HGVLLVEGGQVYSFGELPWKQ----NQTSSAEPILEAVLSEQRVVFVAAGSAHSGVVTED 104
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA--------TACGADFTVWLSSVE 180
G +G N HGQ G + P+PV L SE T ACG T+ LS+
Sbjct: 105 GGVHMWGENVHGQCGLLGLSVIPNPTPVGVLDSEATPPQTVKILEVACGDQHTLALSAKH 164
Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
+G QLG NT V +P+ + L+G +++VACG+ H
Sbjct: 165 EVWAWGSGC----QLG------LNTSTFPVW-------KPQKVDHLSGRHVLQVACGSAH 207
Query: 241 TVAV 244
+VA+
Sbjct: 208 SVAL 211
Score = 107 (42.7 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 27/78 (34%), Positives = 43/78 (55%)
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G Q GQLGHG D +L +P + +L G+ ++KVA G +H++A+ ++
Sbjct: 555 GQGQDGQLGHG--------DLLPRL------QPDCVKSLNGKEVLKVAAGAHHSLALTAQ 600
Query: 248 GYVYTWGFGGYGRLGHRE 265
V++WG G+LGH E
Sbjct: 601 SQVFSWGCNTSGQLGHME 618
Score = 107 (42.7 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 57/191 (29%), Positives = 85/191 (44%)
Query: 112 IKKAGAGRSHTVVVTEDGNSLAFG---WNKHGQLGSGSIRNEIEPSPVRCLVSE--VTAT 166
+ +A G H V++ E G +FG W K Q S EP + ++SE V
Sbjct: 40 VLQAALGARHGVLLVEGGQVYSFGELPW-KQNQTSSA------EPI-LEAVLSEQRVVFV 91
Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGH-GTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
A G+ + ++ G + + +GQ G G N V L EA P P+ +
Sbjct: 92 AAGSAHSGVVTEDGGVHMWGENV--HGQCGLLGLSVIPNPTPVGV-LDSEATP-PQTVK- 146
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG-HREQKDEWVPRRVDVFQRNNVL 284
I++VACG HT+A+ +K V+ WG G +LG + W P++VD +VL
Sbjct: 147 -----ILEVACGDQHTLALSAKHEVWAWGSGC--QLGLNTSTFPVWKPQKVDHLSGRHVL 199
Query: 285 PPEAVISAGSV 295
A SA SV
Sbjct: 200 QV-ACGSAHSV 209
Score = 85 (35.0 bits), Expect = 9.5e-09, Sum P(2) = 9.5e-09
Identities = 21/63 (33%), Positives = 29/63 (46%)
Query: 343 HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
H + SWG Q G+LG+G + P V L G V+ VA G HSL + +
Sbjct: 543 HLPSLQTEVWSWGQGQDGQLGHGDLLPR--LQPDCVKSLNGKEVLKVAAGAHHSLALTAQ 600
Query: 403 TNV 405
+ V
Sbjct: 601 SQV 603
Score = 85 (35.0 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 37/126 (29%), Positives = 49/126 (38%)
Query: 60 FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSK-------YKI 112
FVAAG S H V +G + WG N GQ G PT V L KI
Sbjct: 90 FVAAG--SAHSGVVTEDGGVHMWGENVHGQCGLLGLSVIPNPTPVGVLDSEATPPQTVKI 147
Query: 113 KKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEI-EPSPVRCLVSE-VTATACGA 170
+ G HT+ ++ + W QLG + + +P V L V ACG+
Sbjct: 148 LEVACGDQHTLALSAKHE--VWAWGSGCQLGLNTSTFPVWKPQKVDHLSGRHVLQVACGS 205
Query: 171 DFTVWL 176
+V L
Sbjct: 206 AHSVAL 211
Score = 83 (34.3 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 39/144 (27%), Positives = 64/144 (44%)
Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
++PR RA+ LA I + H ++ ++ V++WG G G+LGH + P V
Sbjct: 523 SRPRMRAVP-LASGGIPETDA---HLPSLQTE--VWSWGQGQDGQLGHGDLLPRLQPDCV 576
Query: 276 DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG-----KLKNNGDDWMYPKPLMDLSG 330
VL ++AG+ +S Q++ WG +L + +P+ L LS
Sbjct: 577 KSLNGKEVLK----VAAGAHHSLALTAQSQVFSWGCNTSGQLGHMESPTTFPQ-LTKLSD 631
Query: 331 WNLRCMD--SGNMHHFVGADSSCI 352
+R D +G H + AD CI
Sbjct: 632 -GIRVWDIGAGLQHTLLLADGDCI 654
Score = 80 (33.2 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 25/105 (23%), Positives = 51/105 (48%)
Query: 305 QLYMWGKLKN----NGD--DWMYPKPLMDLSGWNLRCMDSGNMHHFVG--ADSSCISWGH 356
+++ WG+ ++ +GD + P + L+G + + +G HH + A S SWG
Sbjct: 550 EVWSWGQGQDGQLGHGDLLPRLQPDCVKSLNGKEVLKVAAG-AHHSLALTAQSQVFSWGC 608
Query: 357 AQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
G+LG+ + + P+ + +G+ V + G H+L++ D
Sbjct: 609 NTSGQLGHM---ESPTTFPQLTKLSDGIRVWDIGAGLQHTLLLAD 650
>DICTYBASE|DDB_G0278255 [details] [associations]
symbol:DDB_G0278255 "regulator of chromosome
condensation (RCC1) domain-containing protein" species:44689
"Dictyostelium discoideum" [GO:0044351 "macropinocytosis"
evidence=RCA] dictyBase:DDB_G0278255 INTERPRO:IPR000408
Pfam:PF00415 EMBL:AAFI02000023 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 RefSeq:XP_642243.1
ProteinModelPortal:Q54YF9 PRIDE:Q54YF9 EnsemblProtists:DDB0235387
GeneID:8621452 KEGG:ddi:DDB_G0278255 InParanoid:Q54YF9 OMA:DIACGGY
Uniprot:Q54YF9
Length = 514
Score = 161 (61.7 bits), Expect = 9.9e-09, P = 9.9e-09
Identities = 69/255 (27%), Positives = 113/255 (44%)
Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLG------------SGSIRNEIEPSPVRCL----- 159
+G H++VVT+D +G N QLG S +E P++ L
Sbjct: 183 SGYEHSLVVTKDDGIYGWGRNHKNQLGGRERVKDKSSSPSSPSEDEYYSKPIKVLKETDP 242
Query: 160 VSEVTATAC-GADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP 218
+ + C G+D + L + +G S+ + G +G LGHG + N K++ Y P
Sbjct: 243 IFKDFKKICSGSDHNLLLGN-DG-SLYSWGNGYFGALGHGVGS--NDKEN----IYT--P 292
Query: 219 RPRAIAALAGET--IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQK--DEWVPRR 274
+ L IV +ACG H++ + + +YT+G+G +G+LGH E + ++P+R
Sbjct: 293 KKITTFTLNNNESRIVDIACGGYHSMFLTNDNEIYTFGYGEFGQLGHGENDTLNHYIPKR 352
Query: 275 VDVFQRNNVLPPEAVISAGS-VNSSCTAGGGQLYMWG-----KLKNNGDDWMY-PKPLMD 327
+ N I AG NS G +Y WG L + ++ Y PK +
Sbjct: 353 IKSTGDNAAGNKIKSIFAGDHANSFYITTDGSVYSWGWNDGGSLGHGTNENHYSPKKIQS 412
Query: 328 LSGWNLRCMDSGNMH 342
LS N++ + SG H
Sbjct: 413 LS--NIKKITSGFKH 425
Score = 148 (57.2 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 53/196 (27%), Positives = 86/196 (43%)
Query: 26 GSTCWDAVGRRKGALDG-NLVSPTRLRP--LVGVDIRFVAAGCVSCHCVAVDVEGRCYTW 82
G+ + A+G G+ D N+ +P ++ L + R V C H + + + YT+
Sbjct: 270 GNGYFGALGHGVGSNDKENIYTPKKITTFTLNNNESRIVDIACGGYHSMFLTNDNEIYTF 329
Query: 83 GRNERGQLGHG--DKIQRDRPTIVSELSKY----KIKKAGAG-RSHTVVVTEDGNSLAFG 135
G E GQLGHG D + P + KIK AG +++ +T DG+ ++G
Sbjct: 330 GYGEFGQLGHGENDTLNHYIPKRIKSTGDNAAGNKIKSIFAGDHANSFYITTDGSVYSWG 389
Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
WN G LG G+ N P ++ L S + G T+ S+ I G +GQ
Sbjct: 390 WNDGGSLGHGTNENHYSPKKIQSL-SNIKKITSGFKHTL-AQSINN-DIYVFGDNTFGQT 446
Query: 196 GHGTDNEYNTKDSSVK 211
YN+ +++ K
Sbjct: 447 A--LKFNYNSNNNNDK 460
Score = 138 (53.6 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 55/220 (25%), Positives = 92/220 (41%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG----DKIQRDRP----TIVSELS 108
D + + +G S H + + +G Y+WG G LGHG DK P T +
Sbjct: 246 DFKKICSG--SDHNLLLGNDGSLYSWGNGYFGALGHGVGSNDKENIYTPKKITTFTLNNN 303
Query: 109 KYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS--IRNEIEPSPVR-----CLVS 161
+ +I G H++ +T D FG+ + GQLG G N P ++ +
Sbjct: 304 ESRIVDIACGGYHSMFLTNDNEIYTFGYGEFGQLGHGENDTLNHYIPKRIKSTGDNAAGN 363
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT-DNEYNTKDSSVKLAYEAQPRP 220
++ + G + + +G S+ + G G LGHGT +N Y+ P
Sbjct: 364 KIKSIFAGDHANSFYITTDG-SVYSWGWNDGGSLGHGTNENHYS---------------P 407
Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGR 260
+ I +L+ I K+ G HT+A +Y +G +G+
Sbjct: 408 KKIQSLSN--IKKITSGFKHTLAQSINNDIYVFGDNTFGQ 445
Score = 109 (43.4 bits), Expect = 9.8e-07, Sum P(2) = 9.8e-07
Identities = 45/213 (21%), Positives = 98/213 (46%)
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
+++EY +K +K+ E P + + + + G + ++ GY +G G+
Sbjct: 225 SEDEYYSKP--IKVLKETDPIFKDFKKICSGSDHNLLLGNDGSLYSWGNGY---FGALGH 279
Query: 259 GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG-----KLK 313
G +G ++++ + P+++ F NN I+ G +S ++Y +G +L
Sbjct: 280 G-VGSNDKENIYTPKKITTFTLNNNESRIVDIACGGYHSMFLTNDNEIYTFGYGEFGQLG 338
Query: 314 NNGDDWM--Y-PKPLM----DLSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGY 364
+ +D + Y PK + + +G ++ + +G+ + ++ D S SWG G LG+
Sbjct: 339 HGENDTLNHYIPKRIKSTGDNAAGNKIKSIFAGDHANSFYITTDGSVYSWGWNDGGSLGH 398
Query: 365 GPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G ++ PKK+ L ++ + G+ H+L
Sbjct: 399 GT--NENHYSPKKIQSLS--NIKKITSGFKHTL 427
Score = 91 (37.1 bits), Expect = 9.2e-05, Sum P(2) = 9.2e-05
Identities = 27/101 (26%), Positives = 47/101 (46%)
Query: 317 DDWMYPKPLMDLSGWNLRCMD-----SGNMHHFV-GADSSCISWGHAQYGELGYG--PYG 368
+D Y KP+ L + D SG+ H+ + G D S SWG+ +G LG+G
Sbjct: 226 EDEYYSKPIKVLKETDPIFKDFKKICSGSDHNLLLGNDGSLYSWGNGYFGALGHGVGSND 285
Query: 369 QKSSAMPKKVDIL----EGMHVISVACGYGHSLVIVDRTNV 405
+++ PKK+ ++ +ACG HS+ + + +
Sbjct: 286 KENIYTPKKITTFTLNNNESRIVDIACGGYHSMFLTNDNEI 326
Score = 84 (34.6 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 35/154 (22%), Positives = 69/154 (44%)
Query: 267 KDEWVPRRVDVFQRNN-VLPPEAVISAGSVNSSCTAGGGQLYMWGK---------LKNNG 316
+DE+ + + V + + + I +GS ++ G LY WG + +N
Sbjct: 226 EDEYYSKPIKVLKETDPIFKDFKKICSGSDHNLLLGNDGSLYSWGNGYFGALGHGVGSND 285
Query: 317 DDWMY-PKPL--MDLSGWNLRCMD--SGNMHH-FVGADSSCISWGHAQYGELGYGPYGQK 370
+ +Y PK + L+ R +D G H F+ D+ ++G+ ++G+LG+G
Sbjct: 286 KENIYTPKKITTFTLNNNESRIVDIACGGYHSMFLTNDNEIYTFGYGEFGQLGHGENDTL 345
Query: 371 SSAMPKKV----DILEGMHVISVACG-YGHSLVI 399
+ +PK++ D G + S+ G + +S I
Sbjct: 346 NHYIPKRIKSTGDNAAGNKIKSIFAGDHANSFYI 379
Score = 79 (32.9 bits), Expect = 9.8e-07, Sum P(2) = 9.8e-07
Identities = 25/87 (28%), Positives = 39/87 (44%)
Query: 76 EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG-------AGRSHTVVVTED 128
+ + Y+ G+++ G LG G I D + YKI+K +G H++VVT+D
Sbjct: 135 DNQLYSIGKSKYGVLGIGRSIDDDDDNNNNNEKVYKIEKFNDNIISIVSGYEHSLVVTKD 194
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSP 155
+G N QLG + SP
Sbjct: 195 DGIYGWGRNHKNQLGGRERVKDKSSSP 221
Score = 63 (27.2 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 13/41 (31%), Positives = 23/41 (56%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSK 109
H + V + Y WGRN + QLG +++ +D+ + S S+
Sbjct: 187 HSLVVTKDDGIYGWGRNHKNQLGGRERV-KDKSSSPSSPSE 226
>UNIPROTKB|F1NZF2 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0015630 "microtubule cytoskeleton" evidence=IEA] [GO:0021785
"branchiomotor neuron axon guidance" evidence=IEA] [GO:0021952
"central nervous system projection neuron axonogenesis"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0032880
"regulation of protein localization" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0051493
"regulation of cytoskeleton organization" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872 GO:GO:0030424
GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS50012
InterPro:IPR004939 PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194
GeneTree:ENSGT00390000011403 PANTHER:PTHR12846 OMA:LLSILHW
EMBL:AC149787 EMBL:AADN02042674 IPI:IPI00599046
Ensembl:ENSGALT00000027346 Uniprot:F1NZF2
Length = 4580
Score = 141 (54.7 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 40/116 (34%), Positives = 54/116 (46%)
Query: 31 DAVGRRKGALDGNLVS---PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNER 87
D G R G D + ++ P +R ++R V C H V + G YT+G +
Sbjct: 813 DGSGER-GEKDASKITTYPPGAVR--FDCELRAVQVSCGFHHSVILMENGDVYTFGYGQH 869
Query: 88 GQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG 143
GQLGHGD R PT+V L + AG +HT ++ DG FG GQLG
Sbjct: 870 GQLGHGDVNSRGCPTLVQALPGPSTQVT-AGSNHTAILLMDGQVFTFGSFSKGQLG 924
Score = 139 (54.0 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 44/152 (28%), Positives = 69/152 (45%)
Query: 190 PQYGQLGHGTDN------EYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
P QL H D E KD+S Y P P A+ V+V+CG +H+V
Sbjct: 799 PHPAQLKHKRDKHKDGSGERGEKDASKITTY---P-PGAVRFDCELRAVQVSCGFHHSVI 854
Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP-PEAVISAGSVNSSCTAG 302
+ G VYT+G+G +G+LGH + P V LP P ++AGS +++
Sbjct: 855 LMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQA------LPGPSTQVTAGSNHTAILLM 908
Query: 303 GGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLR 334
GQ++ +G +P++D+ WN +
Sbjct: 909 DGQVFTFGSFSKG----QLGRPILDMPYWNAK 936
Score = 87 (35.7 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 24/104 (23%), Positives = 51/104 (49%)
Query: 47 PTRLRPLVGVDIRFV-AAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
P + + ++ ++ + V + C + + +G Y +G+ D I D ++V+
Sbjct: 526 PYKPKKIIKMEGKIVISTACNNGSSSVISKDGELYMFGK---------DAIYSDSTSLVT 576
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG--SGSI 147
+L + + + G++HT V+ ++G FG N GQ G +GS+
Sbjct: 577 DLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGRDTGSM 620
Score = 44 (20.5 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 268 DEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKL 312
D +P D+ R ++L PE + GS + T L++ G L
Sbjct: 1056 DSRLPSAPDMQSRCSILSPELALPTGS-KALTTRSHAALHILGCL 1099
>UNIPROTKB|D4A2D3 [details] [associations]
symbol:Mycbp2 "Protein Mycbp2" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 RGD:1312048 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872
GO:GO:0030424 GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
OrthoDB:EOG4VQ9NB GO:GO:0021785 IPI:IPI00765932
ProteinModelPortal:D4A2D3 Ensembl:ENSRNOT00000014583
ArrayExpress:D4A2D3 Uniprot:D4A2D3
Length = 4715
Score = 150 (57.9 bits), Expect = 0.00068, Sum P(3) = 0.00068
Identities = 43/116 (37%), Positives = 55/116 (47%)
Query: 31 DAVGRRKGALDGNLVS---PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNER 87
DA G R G D + V+ P +R ++R V C H V + G YT+G +
Sbjct: 875 DASGER-GEKDASKVTTYPPGSVR--FDCEVRAVQVSCGFHHSVVLMENGDVYTFGYGQH 931
Query: 88 GQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG 143
GQLGHGD R PT+V L + AG +HT V+ DG FG GQLG
Sbjct: 932 GQLGHGDVNSRGCPTLVQALPGPSTQVT-AGSNHTAVLVMDGQVFTFGSFSKGQLG 986
Score = 136 (52.9 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 38/134 (28%), Positives = 64/134 (47%)
Query: 202 EYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRL 261
E KD+S Y P P ++ V+V+CG +H+V + G VYT+G+G +G+L
Sbjct: 879 ERGEKDASKVTTY---P-PGSVRFDCEVRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQL 934
Query: 262 GHREQKDEWVPRRVDVFQRNNVLP-PEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWM 320
GH + P V LP P ++AGS +++ GQ++ +G
Sbjct: 935 GHGDVNSRGCPTLVQA------LPGPSTQVTAGSNHTAVLVMDGQVFTFGSFSKG----Q 984
Query: 321 YPKPLMDLSGWNLR 334
+P++D+ WN +
Sbjct: 985 LGRPILDVPYWNAK 998
Score = 90 (36.7 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 24/100 (24%), Positives = 48/100 (48%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCH---CVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTI 103
P + + ++ ++ + V C +C+ + +G Y +G+ D I D ++
Sbjct: 588 PYKPKKIIKMEGKIVV--CTACNNGSSSVISKDGELYMFGK---------DAIYSDSSSL 636
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG 143
VS+L + + + G++HT V+ ++G FG N GQ G
Sbjct: 637 VSDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 676
Score = 38 (18.4 bits), Expect = 0.00068, Sum P(3) = 0.00068
Identities = 7/13 (53%), Positives = 12/13 (92%)
Query: 159 LVSEVTATACGAD 171
+VSE+TA+A G++
Sbjct: 1658 IVSELTASALGSE 1670
Score = 37 (18.1 bits), Expect = 0.00068, Sum P(3) = 0.00068
Identities = 14/64 (21%), Positives = 28/64 (43%)
Query: 197 HGTDNEYNTKDSSVKLA---YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
H D+ ++ + +S++L Y P IA + + +V + + V + + G
Sbjct: 1742 HSGDSTHSHRWTSLELVKGTYTTDDSPSDIAEIRLDKVVPLKENVKYAVRLRNYGSRTAN 1801
Query: 254 GFGG 257
G GG
Sbjct: 1802 GDGG 1805
>MGI|MGI:2137600 [details] [associations]
symbol:Wbscr16 "Williams-Beuren syndrome chromosome region
16 homolog (human)" species:10090 "Mus musculus" [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=NAS]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0050790 "regulation
of catalytic activity" evidence=NAS] MGI:MGI:2137600
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GeneTree:ENSGT00700000104312 CTD:81554 HOGENOM:HOG000232125
HOVERGEN:HBG054246 OMA:MVTLAKS OrthoDB:EOG4F1X33 EMBL:AK017733
EMBL:BC024714 EMBL:BC055335 IPI:IPI00111460 RefSeq:NP_291050.1
UniGene:Mm.29508 ProteinModelPortal:Q9CYF5 SMR:Q9CYF5 STRING:Q9CYF5
PhosphoSite:Q9CYF5 PRIDE:Q9CYF5 Ensembl:ENSMUST00000076228
GeneID:94254 KEGG:mmu:94254 InParanoid:Q9CYF5 NextBio:352275
Bgee:Q9CYF5 Genevestigator:Q9CYF5 GermOnline:ENSMUSG00000061979
Uniprot:Q9CYF5
Length = 461
Score = 159 (61.0 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 76/308 (24%), Positives = 124/308 (40%)
Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEI--EPSPVRCLVS---EVTA 165
K+ + GR+H++V+T+ + G N HGQ G + +E+ E V + +V
Sbjct: 172 KVLQVSCGRAHSLVLTDREGVFSMGNNSHGQCGRKVVEDEVYSESHKVHRMQDFDGQVVQ 231
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
CG D +++L+ +G + + G GQ G G YN + KL +
Sbjct: 232 VVCGQDHSLFLTD-KG-EVYSCGWGADGQTGLG---HYNITSTPSKLGGD---------- 276
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEW-VPRRVDVFQRNNVL 284
LAG T+V+VA + +A+ + G V+ WG Y +L + VPR + V
Sbjct: 277 LAGVTVVQVATYGDCCLALSADGGVFGWGNSEYLQLASVTDSTQVNVPRCLPFSGVGKVK 336
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG--------KLKNNGDDWMYPKPLMDLSGWNLRCM 336
++ G + G +++WG KL M P L L+ +N
Sbjct: 337 Q----VACGGTGCAVLNAEGHVFVWGYGILGKGPKLLETAIPEMIPPTLFGLTEFNPEVQ 392
Query: 337 DSG---NMHHFVGADSS--CISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVAC 391
S + HF + WG G LG G + P +V + G + VAC
Sbjct: 393 VSQIRCGLSHFAALTNKGELFVWGKNIRGCLGIGRL--EDQYFPWRVT-MPG-EPVDVAC 448
Query: 392 GYGHSLVI 399
G H + +
Sbjct: 449 GVDHMVTL 456
Score = 151 (58.2 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 66/270 (24%), Positives = 113/270 (41%)
Query: 57 DIRFVAAGCVSCHC-VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKY----- 110
+ + + C H V D EG ++ G N GQ G K+ D + SE K
Sbjct: 170 ETKVLQVSCGRAHSLVLTDREG-VFSMGNNSHGQCGR--KVVEDE--VYSESHKVHRMQD 224
Query: 111 ---KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT- 166
++ + G+ H++ +T+ G + GW GQ G G PS + ++ VT
Sbjct: 225 FDGQVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTPSKLGGDLAGVTVVQ 284
Query: 167 -ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
A D + LS+ G + G +Y QL TD+ + V + PR +
Sbjct: 285 VATYGDCCLALSADGG--VFGWGNSEYLQLASVTDS------TQVNV-------PRCLPF 329
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD--VFQRNNV 283
+ +VACG ++++G+V+ WG+G G+ G + + +P + +F
Sbjct: 330 SGVGKVKQVACGGTGCAVLNAEGHVFVWGYGILGK-GPKLLETA-IPEMIPPTLFGLTEF 387
Query: 284 LPPEAV--ISAGSVNSSCTAGGGQLYMWGK 311
P V I G + + G+L++WGK
Sbjct: 388 NPEVQVSQIRCGLSHFAALTNKGELFVWGK 417
Score = 138 (53.6 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 58/255 (22%), Positives = 106/255 (41%)
Query: 148 RNEIEPSPVRC-LVSEVTATACGADFTVWLSSVEGAS-ILNAGLPQYGQLGHGTDNEYNT 205
R I+P P R L ++++ ACG FT+ S + + + GL + QLG + T
Sbjct: 90 RRRIQPVPYRLELDHKISSAACGYGFTLLSSKTKDVTKVWGMGLNKDSQLGFHRSRKDKT 149
Query: 206 KDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHRE 265
+ L E P P + +++V+CG H++ + + V++ G +G+ G +
Sbjct: 150 RGYEYVL--EPSPVPLPLDRPQETKVLQVSCGRAHSLVLTDREGVFSMGNNSHGQCGRKV 207
Query: 266 QKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM--WGKLKNNG----DDW 319
+DE V + + + G +S G++Y WG G +
Sbjct: 208 VEDEVYSESHKVHRMQDFDGQVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNIT 267
Query: 320 MYPKPLM-DLSGWNL-RCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
P L DL+G + + G+ + AD WG+++Y +L + + +P+
Sbjct: 268 STPSKLGGDLAGVTVVQVATYGDCCLALSADGGVFGWGNSEYLQLASVTDSTQVN-VPRC 326
Query: 378 VDILEGMHVISVACG 392
+ V VACG
Sbjct: 327 LPFSGVGKVKQVACG 341
Score = 127 (49.8 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 56/225 (24%), Positives = 90/225 (40%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKA 115
D + V C H + + +G Y+ G GQ G G P+ + +L+ + +
Sbjct: 226 DGQVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTPSKLGGDLAGVTVVQV 285
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL----VSEVTATACGAD 171
+ ++ DG FGW L S+ + + + RCL V +V ACG
Sbjct: 286 ATYGDCCLALSADGG--VFGWGNSEYLQLASVTDSTQVNVPRCLPFSGVGKVKQVACGGT 343
Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
L++ EG + G YG LG G K + P + E
Sbjct: 344 GCAVLNA-EG-HVFVWG---YGILGKGP------KLLETAIPEMIPPTLFGLTEFNPEVQ 392
Query: 232 V-KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
V ++ CG +H A+ +KG ++ WG G LG +D++ P RV
Sbjct: 393 VSQIRCGLSHFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRV 437
>UNIPROTKB|E9PDR5 [details] [associations]
symbol:IBTK "Inhibitor of Bruton tyrosine kinase"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PROSITE:PS50012 EMBL:AL050333
HGNC:HGNC:17853 ChiTaRS:IBTK IPI:IPI00964822
ProteinModelPortal:E9PDR5 SMR:E9PDR5 Ensembl:ENST00000503631
UCSC:uc011dyw.1 ArrayExpress:E9PDR5 Bgee:E9PDR5 Uniprot:E9PDR5
Length = 1152
Score = 164 (62.8 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 66/236 (27%), Positives = 100/236 (42%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSK--YKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
YTWG N LGHG + + P +V S+ IK+ + H+V +++ G G
Sbjct: 145 YTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHG 204
Query: 138 KHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
G+LG G + + P V L + A D TV L+ E + GL + QLG
Sbjct: 205 PGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLT--EDGCVYTFGLNIFHQLG 262
Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
SS + PR L G TI+ VA G HTV + ++ VYT G
Sbjct: 263 ------IIPPPSSCNV-----PRQIQAKYLKGRTIIGVAAGRFHTV-LWTREAVYTMGLN 310
Query: 257 GYGRLG----HREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
G G+LG +K PR+V ++ ++++A + C G +Y+
Sbjct: 311 G-GQLGCLLDPNGEKCVTAPRQVSALHHKDIAL--SLVAASDGATVCVTTRGDIYL 363
Score = 145 (56.1 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 72/282 (25%), Positives = 115/282 (40%)
Query: 55 GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK 114
G+ I+ V C H V + +G+ YT G G+LGHGD+ P +V L+ + +
Sbjct: 176 GIYIKQVVL-C-KFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGHNCSQ 233
Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLG------SGSIRNEIEPSPVRCLVSEVTATAC 168
A + HTVV+TEDG FG N QLG S ++ +I+ ++ + A
Sbjct: 234 VAAAKDHTVVLTEDGCVYTFGLNIFHQLGIIPPPSSCNVPRQIQAKYLKGRT--IIGVAA 291
Query: 169 GADFTV-WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALA 227
G TV W ++ GL GQLG D + PR ++AL
Sbjct: 292 GRFHTVLWTRE----AVYTMGL-NGGQLGCLLDPN----------GEKCVTAPRQVSALH 336
Query: 228 GETIVK--VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
+ I VA TV V ++G +Y ++ ++ + V V +
Sbjct: 337 HKDIALSLVAASDGATVCVTTRGDIYLLADYQCKKMASKQLNLKKV--LVSGGHMEYKVD 394
Query: 286 PEAVISAGSVNSSCTA--GGGQLYMWGKLKNNGDD--WMYPK 323
PE + G A G G+++ W + ++ W YP+
Sbjct: 395 PEHLKENGGQKICILAMDGAGRVFCWRSVNSSLKQCRWAYPR 436
Score = 124 (48.7 bits), Expect = 0.00035, P = 0.00035
Identities = 42/158 (26%), Positives = 74/158 (46%)
Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
VYTWG LGH Q + P VD+F R+ + + V+ +S + GQ+Y
Sbjct: 144 VYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLC--KFHSVFLSQKGQVYTC 201
Query: 310 GK----LKNNGDDW--MYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGEL 362
G +GD+ + P+ + L+G N + + H V + C+ ++G + +L
Sbjct: 202 GHGPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQL 261
Query: 363 GYGPYGQKSSAMPKKVDI--LEGMHVISVACGYGHSLV 398
G P S +P+++ L+G +I VA G H+++
Sbjct: 262 GIIP-PPSSCNVPRQIQAKYLKGRTIIGVAAGRFHTVL 298
>DICTYBASE|DDB_G0276527 [details] [associations]
symbol:DDB_G0276527 "putative bifunctional
serine/threonine-protein kinase/ubiquitin-protein ligase
DDB_G0276527" species:44689 "Dictyostelium discoideum" [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0006468 "protein phosphorylation" evidence=IEA]
[GO:0006464 "cellular protein modification process" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0004672 "protein kinase activity"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 InterPro:IPR000719 InterPro:IPR008271
InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143
dictyBase:DDB_G0276527 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005524 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 EMBL:AAFI02000015 SUPFAM:SSF56204 HSSP:Q9H0M0
RefSeq:XP_643080.1 ProteinModelPortal:Q8SSY6
EnsemblProtists:DDB0219986 GeneID:8620484 KEGG:ddi:DDB_G0276527
InParanoid:Q8SSY6 OMA:IITIIVE Uniprot:Q8SSY6
Length = 1887
Score = 166 (63.5 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 52/229 (22%), Positives = 98/229 (42%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDK--IQRDRPTIVSELSKYKIKKA 115
I+ V C + + +G +T+GR + G+LG G++ + + P +V L + I
Sbjct: 338 IKIVKLSCGTNRSAVITDKGLLFTFGRGDHGRLGLGEQSLLMQSTPKLVQSLQGHFIIDM 397
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVSE---------VTA 165
+G H++V+T G +FG N GQLG G N+ P ++ + +
Sbjct: 398 SSGGGHSLVLTNKGLVFSFGRNDQGQLGIGCFSNQQTIPKQIQWFQTSQQQQQQPINIIK 457
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
+ G ++ +S + G YG LG D + D ++ + +
Sbjct: 458 VSAGGYHSIAIS--DNNDTYAWGRSDYGVLGTSIDVQ---GDRNLPVLINSNS-----VV 507
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
+ + V+ G H VA+ G +Y+WG RLG + +++ P++
Sbjct: 508 VDNVKFIDVSSGFQHNVAMSIDGSLYSWGCNAGQRLGFKSDENQLTPKK 556
Score = 161 (61.7 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 56/213 (26%), Positives = 94/213 (44%)
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG--SIRNEIEPSPVRCLVSE 162
S +K KI K G + + V+T+ G FG HG+LG G S+ + P V+ L
Sbjct: 333 SNNNKIKIVKLSCGTNRSAVITDKGLLFTFGRGDHGRLGLGEQSLLMQSTPKLVQSLQGH 392
Query: 163 -VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
+ + G ++ L++ +G + + G GQLG G + T ++ +Q + +
Sbjct: 393 FIIDMSSGGGHSLVLTN-KGL-VFSFGRNDQGQLGIGCFSNQQTIPKQIQWFQTSQQQQQ 450
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
I+KV+ G H++A+ Y WG YG LG D R + V +
Sbjct: 451 QPI-----NIIKVSAGGYHSIAISDNNDTYAWGRSDYGVLG--TSIDVQGDRNLPVLINS 503
Query: 282 NVLPPEAV----ISAGSVNSSCTAGGGQLYMWG 310
N + + V +S+G ++ + G LY WG
Sbjct: 504 NSVVVDNVKFIDVSSGFQHNVAMSIDGSLYSWG 536
Score = 117 (46.2 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 40/148 (27%), Positives = 65/148 (43%)
Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQK--DEWVPRRVDVFQRNNVLPPEA 288
IVK++CGTN + + KG ++T+G G +GRLG EQ + P+ V Q + ++ +
Sbjct: 340 IVKLSCGTNRSAVITDKGLLFTFGRGDHGRLGLGEQSLLMQSTPKLVQSLQGHFIIDMSS 399
Query: 289 -------VISAGSVNSSCTAGGGQLYMWGKLKNNGD-----DWMYPKPLMDLSGWNLRCM 336
+ + G V S GQL + G N W N+ +
Sbjct: 400 GGGHSLVLTNKGLVFSFGRNDQGQLGI-GCFSNQQTIPKQIQWFQTSQQQQQQPINIIKV 458
Query: 337 DSGNMHHFVGADSS-CISWGHAQYGELG 363
+G H +D++ +WG + YG LG
Sbjct: 459 SAGGYHSIAISDNNDTYAWGRSDYGVLG 486
Score = 112 (44.5 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 24/100 (24%), Positives = 50/100 (50%)
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHR-EQKDEWVPRRV 275
Q P+ + +L G I+ ++ G H++ + +KG V+++G G+LG + +P+++
Sbjct: 380 QSTPKLVQSLQGHFIIDMSSGGGHSLVLTNKGLVFSFGRNDQGQLGIGCFSNQQTIPKQI 439
Query: 276 DVFQRNNVLPPEAV----ISAGSVNSSCTAGGGQLYMWGK 311
FQ + + + +SAG +S + Y WG+
Sbjct: 440 QWFQTSQQQQQQPINIIKVSAGGYHSIAISDNNDTYAWGR 479
Score = 105 (42.0 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 44/177 (24%), Positives = 75/177 (42%)
Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG--HREQKDEW-VPRRVDV-FQRNNVLPP 286
+V +A G H++A+ G VY+WG +LG + + +P+ ++ NN
Sbjct: 245 VVSIANGGKHSLALTICGKVYSWGGNDSCQLGLGNGSSSSYYSLPQLINFNISYNNNNNN 304
Query: 287 EAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVG 346
S + N++ G Q + L N ++ LS C G V
Sbjct: 305 NNNNSTNNNNNNNNDGAQQQF---SLSQNSSSNNNKIKIVKLS-----C---GTNRSAVI 353
Query: 347 ADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
D + ++G +G LG G + PK V L+G +I ++ G GHSLV+ ++
Sbjct: 354 TDKGLLFTFGRGDHGRLGLGEQSLLMQSTPKLVQSLQGHFIIDMSSGGGHSLVLTNK 410
Score = 87 (35.7 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 24/92 (26%), Positives = 41/92 (44%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELS---KYKIKK 114
I ++ G + H + +G YT+G G+LGHG+ P +V ++
Sbjct: 190 IVLISTGAI--HSSFITDQGNLYTFGDGLLGKLGHGNLESYSSPKLVEFFQTKPSLRVVS 247
Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS 146
G H++ +T G ++G N QLG G+
Sbjct: 248 IANGGKHSLALTICGKVYSWGGNDSCQLGLGN 279
Score = 68 (29.0 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 17/53 (32%), Positives = 27/53 (50%)
Query: 105 SEL-SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
SE+ ++ KI G H+ +T+ GN FG G+LG G++ + P V
Sbjct: 182 SEMYNQQKIVLISTGAIHSSFITDQGNLYTFGDGLLGKLGHGNLESYSSPKLV 234
>UNIPROTKB|E7EPI0 [details] [associations]
symbol:IBTK "Inhibitor of Bruton tyrosine kinase"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PROSITE:PS50012 EMBL:AL050333
HGNC:HGNC:17853 ChiTaRS:IBTK IPI:IPI00964356
ProteinModelPortal:E7EPI0 SMR:E7EPI0 Ensembl:ENST00000510291
UCSC:uc011dyv.1 ArrayExpress:E7EPI0 Bgee:E7EPI0 Uniprot:E7EPI0
Length = 1338
Score = 164 (62.8 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 66/236 (27%), Positives = 100/236 (42%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSK--YKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
YTWG N LGHG + + P +V S+ IK+ + H+V +++ G G
Sbjct: 145 YTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHG 204
Query: 138 KHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
G+LG G + + P V L + A D TV L+ E + GL + QLG
Sbjct: 205 PGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLT--EDGCVYTFGLNIFHQLG 262
Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
SS + PR L G TI+ VA G HTV + ++ VYT G
Sbjct: 263 ------IIPPPSSCNV-----PRQIQAKYLKGRTIIGVAAGRFHTV-LWTREAVYTMGLN 310
Query: 257 GYGRLG----HREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
G G+LG +K PR+V ++ ++++A + C G +Y+
Sbjct: 311 G-GQLGCLLDPNGEKCVTAPRQVSALHHKDIAL--SLVAASDGATVCVTTRGDIYL 363
Score = 145 (56.1 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 72/282 (25%), Positives = 115/282 (40%)
Query: 55 GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK 114
G+ I+ V C H V + +G+ YT G G+LGHGD+ P +V L+ + +
Sbjct: 176 GIYIKQVVL-C-KFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGHNCSQ 233
Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLG------SGSIRNEIEPSPVRCLVSEVTATAC 168
A + HTVV+TEDG FG N QLG S ++ +I+ ++ + A
Sbjct: 234 VAAAKDHTVVLTEDGCVYTFGLNIFHQLGIIPPPSSCNVPRQIQAKYLKGRT--IIGVAA 291
Query: 169 GADFTV-WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALA 227
G TV W ++ GL GQLG D + PR ++AL
Sbjct: 292 GRFHTVLWTRE----AVYTMGL-NGGQLGCLLDPN----------GEKCVTAPRQVSALH 336
Query: 228 GETIVK--VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
+ I VA TV V ++G +Y ++ ++ + V V +
Sbjct: 337 HKDIALSLVAASDGATVCVTTRGDIYLLADYQCKKMASKQLNLKKV--LVSGGHMEYKVD 394
Query: 286 PEAVISAGSVNSSCTA--GGGQLYMWGKLKNNGDD--WMYPK 323
PE + G A G G+++ W + ++ W YP+
Sbjct: 395 PEHLKENGGQKICILAMDGAGRVFCWRSVNSSLKQCRWAYPR 436
Score = 124 (48.7 bits), Expect = 0.00042, P = 0.00042
Identities = 42/158 (26%), Positives = 74/158 (46%)
Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
VYTWG LGH Q + P VD+F R+ + + V+ +S + GQ+Y
Sbjct: 144 VYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLC--KFHSVFLSQKGQVYTC 201
Query: 310 GK----LKNNGDDW--MYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGEL 362
G +GD+ + P+ + L+G N + + H V + C+ ++G + +L
Sbjct: 202 GHGPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQL 261
Query: 363 GYGPYGQKSSAMPKKVDI--LEGMHVISVACGYGHSLV 398
G P S +P+++ L+G +I VA G H+++
Sbjct: 262 GIIP-PPSSCNVPRQIQAKYLKGRTIIGVAAGRFHTVL 298
>UNIPROTKB|Q9P2D0 [details] [associations]
symbol:IBTK "Inhibitor of Bruton tyrosine kinase"
species:9606 "Homo sapiens" [GO:0016020 "membrane" evidence=IEA]
[GO:0001933 "negative regulation of protein phosphorylation"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0019901
"protein kinase binding" evidence=IDA] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=IDA] [GO:0051209
"release of sequestered calcium ion into cytosol" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=IDA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0019901
GO:GO:0016020 Pathway_Interaction_DB:bcr_5pathway GO:GO:0051209
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GO:GO:0030292 EMBL:DQ005633 EMBL:DQ005634
EMBL:DQ005635 EMBL:AB037838 EMBL:AL050333 EMBL:BC027490
EMBL:BC038244 EMBL:BC042171 EMBL:BC113696 EMBL:BC113698
EMBL:AL050018 EMBL:AF235049 IPI:IPI00792333 IPI:IPI00829736
IPI:IPI00910313 PIR:T08705 RefSeq:NP_056340.2 UniGene:Hs.306425
ProteinModelPortal:Q9P2D0 SMR:Q9P2D0 IntAct:Q9P2D0 MINT:MINT-215747
STRING:Q9P2D0 PhosphoSite:Q9P2D0 DMDM:134034141 PaxDb:Q9P2D0
PRIDE:Q9P2D0 DNASU:25998 Ensembl:ENST00000306270 GeneID:25998
KEGG:hsa:25998 UCSC:uc003pjl.1 UCSC:uc003pjm.2 CTD:25998
GeneCards:GC06M082879 HGNC:HGNC:17853 HPA:HPA023826 MIM:606457
neXtProt:NX_Q9P2D0 PharmGKB:PA134898277 HOVERGEN:HBG081779
InParanoid:Q9P2D0 OMA:VSALHHK OrthoDB:EOG4J6RQ1 ChiTaRS:IBTK
GenomeRNAi:25998 NextBio:47714 ArrayExpress:Q9P2D0 Bgee:Q9P2D0
Genevestigator:Q9P2D0 Uniprot:Q9P2D0
Length = 1353
Score = 164 (62.8 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 66/236 (27%), Positives = 100/236 (42%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSK--YKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
YTWG N LGHG + + P +V S+ IK+ + H+V +++ G G
Sbjct: 145 YTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHG 204
Query: 138 KHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
G+LG G + + P V L + A D TV L+ E + GL + QLG
Sbjct: 205 PGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLT--EDGCVYTFGLNIFHQLG 262
Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
SS + PR L G TI+ VA G HTV + ++ VYT G
Sbjct: 263 ------IIPPPSSCNV-----PRQIQAKYLKGRTIIGVAAGRFHTV-LWTREAVYTMGLN 310
Query: 257 GYGRLG----HREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
G G+LG +K PR+V ++ ++++A + C G +Y+
Sbjct: 311 G-GQLGCLLDPNGEKCVTAPRQVSALHHKDIAL--SLVAASDGATVCVTTRGDIYL 363
Score = 145 (56.1 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 72/282 (25%), Positives = 115/282 (40%)
Query: 55 GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK 114
G+ I+ V C H V + +G+ YT G G+LGHGD+ P +V L+ + +
Sbjct: 176 GIYIKQVVL-C-KFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGHNCSQ 233
Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLG------SGSIRNEIEPSPVRCLVSEVTATAC 168
A + HTVV+TEDG FG N QLG S ++ +I+ ++ + A
Sbjct: 234 VAAAKDHTVVLTEDGCVYTFGLNIFHQLGIIPPPSSCNVPRQIQAKYLKGRT--IIGVAA 291
Query: 169 GADFTV-WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALA 227
G TV W ++ GL GQLG D + PR ++AL
Sbjct: 292 GRFHTVLWTRE----AVYTMGL-NGGQLGCLLDPN----------GEKCVTAPRQVSALH 336
Query: 228 GETIVK--VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
+ I VA TV V ++G +Y ++ ++ + V V +
Sbjct: 337 HKDIALSLVAASDGATVCVTTRGDIYLLADYQCKKMASKQLNLKKV--LVSGGHMEYKVD 394
Query: 286 PEAVISAGSVNSSCTA--GGGQLYMWGKLKNNGDD--WMYPK 323
PE + G A G G+++ W + ++ W YP+
Sbjct: 395 PEHLKENGGQKICILAMDGAGRVFCWRSVNSSLKQCRWAYPR 436
Score = 124 (48.7 bits), Expect = 0.00043, P = 0.00042
Identities = 42/158 (26%), Positives = 74/158 (46%)
Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
VYTWG LGH Q + P VD+F R+ + + V+ +S + GQ+Y
Sbjct: 144 VYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLC--KFHSVFLSQKGQVYTC 201
Query: 310 GK----LKNNGDDW--MYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGEL 362
G +GD+ + P+ + L+G N + + H V + C+ ++G + +L
Sbjct: 202 GHGPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQL 261
Query: 363 GYGPYGQKSSAMPKKVDI--LEGMHVISVACGYGHSLV 398
G P S +P+++ L+G +I VA G H+++
Sbjct: 262 GIIP-PPSSCNVPRQIQAKYLKGRTIIGVAAGRFHTVL 298
>WB|WBGene00021461 [details] [associations]
symbol:nekl-1 species:6239 "Caenorhabditis elegans"
[GO:0004672 "protein kinase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0004713 "protein tyrosine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 GO:GO:0005524 eggNOG:COG0515
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 EMBL:FO081209
KO:K08857 GeneTree:ENSGT00700000104137 RefSeq:NP_490968.2
ProteinModelPortal:Q6AW07 SMR:Q6AW07 EnsemblMetazoa:Y39G10AR.3
GeneID:189769 KEGG:cel:CELE_Y39G10AR.3 UCSC:Y39G10AR.3 CTD:189769
WormBase:Y39G10AR.3 HOGENOM:HOG000017263 InParanoid:Q6AW07
OMA:RNDNTEL NextBio:943564 Uniprot:Q6AW07
Length = 998
Score = 162 (62.1 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 69/271 (25%), Positives = 115/271 (42%)
Query: 56 VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKA 115
+ I+ VA H + + + + +G N GQLG G + + +V L I+
Sbjct: 467 ISIKQVALS--KTHTMVLTNDNELFGFGDNSCGQLGFGKFSKMENGRLVESLKGRDIQSV 524
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTV 174
G G +V+ + G L FG K+ LG + ++ +P + L+ E + CG D V
Sbjct: 525 GVGNYFSVICCDRGTLLTFGTAKNLGLGKDA-KDSAKPMLLEQLLRENIKDIYCGHDHVV 583
Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR--PRAIAALAGETIV 232
+ +E L G QYGQLG T E+ + V EA P I + + IV
Sbjct: 584 --AVLESGECLGWGSNQYGQLGLPT-LEHFFAPTKVFFLNEATALYGPFQIPMPSNKKIV 640
Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQ-----KDEWVPRRVDVFQRNNVLP-- 285
G + T+ + G + G + +L ++ K++ P D + +L
Sbjct: 641 YGKAGKDATMLLSDDGSLIAMGSNKHNKLNLTQRVGFFTKEKKTPN--DYVNKPTILQGF 698
Query: 286 PEAVI--SAGSVNSSCTAGGGQLYMWGKLKN 314
PE V+ S GS +S GQ+ ++G+ N
Sbjct: 699 PERVVDFSVGSYHSGVILESGQVMIFGRNDN 729
Score = 145 (56.1 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 85/323 (26%), Positives = 123/323 (38%)
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTAT 166
S+ IK+ ++HT+V+T D FG N GQLG G V L ++ +
Sbjct: 465 SRISIKQVALSKTHTMVLTNDNELFGFGDNSCGQLGFGKFSKMENGRLVESLKGRDIQSV 524
Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
G F+V + ++L G + LG G D KDS+ +P + L
Sbjct: 525 GVGNYFSV--ICCDRGTLLTFGTAK--NLGLGKD----AKDSA---------KPMLLEQL 567
Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL-- 284
E I + CG +H VAV G WG YG+LG + + P +V L
Sbjct: 568 LRENIKDIYCGHDHVVAVLESGECLGWGSNQYGQLGLPTLEHFFAPTKVFFLNEATALYG 627
Query: 285 ------PPEAVISAGSVNSSCT---AGGGQLYMWGKLKNN--------G---------DD 318
P I G T + G L G K+N G +D
Sbjct: 628 PFQIPMPSNKKIVYGKAGKDATMLLSDDGSLIAMGSNKHNKLNLTQRVGFFTKEKKTPND 687
Query: 319 WMYPKPLMDLSGWNLRCMDS--GNMHHFVGADSSCIS-WGHAQYGELGYGPYGQKSSAMP 375
++ KP + L G+ R +D G+ H V +S + +G ELG G + +
Sbjct: 688 YVN-KPTI-LQGFPERVVDFSVGSYHSGVILESGQVMIFGRNDNTELGLGNSQKMAVRCV 745
Query: 376 KKVDILEGMHVISVACGYGHSLV 398
K V L V CG G +LV
Sbjct: 746 KPVKSLLHHACTHVLCGDGFTLV 768
>UNIPROTKB|E1BX75 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005543 "phospholipid binding" evidence=IEA]
[GO:0001662 "behavioral fear response" evidence=IEA] [GO:0001726
"ruffle" evidence=IEA] [GO:0001881 "receptor recycling"
evidence=IEA] [GO:0005769 "early endosome" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0007626 "locomotory behavior" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] [GO:0014069
"postsynaptic density" evidence=IEA] [GO:0016050 "vesicle
organization" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=IEA] [GO:0017137 "Rab GTPase binding"
evidence=IEA] [GO:0030027 "lamellipodium" evidence=IEA] [GO:0030676
"Rac guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0031982 "vesicle" evidence=IEA] [GO:0032313 "regulation of Rab
GTPase activity" evidence=IEA] [GO:0032855 "positive regulation of
Rac GTPase activity" evidence=IEA] [GO:0035249 "synaptic
transmission, glutamatergic" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0043234 "protein
complex" evidence=IEA] [GO:0043539 "protein serine/threonine kinase
activator activity" evidence=IEA] [GO:0048812 "neuron projection
morphogenesis" evidence=IEA] [GO:0051036 "regulation of endosome
size" evidence=IEA] InterPro:IPR000219 InterPro:IPR001849
Pfam:PF00621 PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 GO:GO:0005829
GO:GO:0005813 GO:GO:0043234 GO:GO:0014069 GO:GO:0008104
GO:GO:0006979 GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0043539 GO:GO:0016197 Gene3D:1.20.900.10 SUPFAM:SSF48065
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 GeneTree:ENSGT00600000084242 OMA:AKPAIDF
GO:GO:0005769 GO:GO:0017112 GO:GO:0030676 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:AADN02019863
IPI:IPI00580588 Ensembl:ENSGALT00000013707 Uniprot:E1BX75
Length = 1651
Score = 164 (62.8 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 58/186 (31%), Positives = 88/186 (47%)
Query: 34 GRRKGALDGNL--VSPTRLRPLVGVDIRFVA-AGCVSCHCVAV--DVEGRCYTWGRNERG 88
G R+ +L G L VSP LR + +R VA S A+ + ++WGR + G
Sbjct: 473 GSRRLSLPGLLSQVSPRLLRKVGRAKMRTVALTPTYSGEADALLPSLRTEVWSWGRGKDG 532
Query: 89 QLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIR 148
QLGHGD + R +P V L ++ + AG H++ +T ++G N GQLG +
Sbjct: 533 QLGHGDVLPRLQPLCVKSLDGKEVIQLSAGGHHSLALTAKSQVYSWGSNIFGQLGHTNSP 592
Query: 149 NEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDN--EYNTK 206
+ P + V +TA G+D++++L+ E GL GQ TDN E N
Sbjct: 593 TTV-PRLAKVCGDGVWSTAAGSDYSLFLADEED---FQPGLYYCGQ-ETATDNLSENNCS 647
Query: 207 DSSVKL 212
+ V L
Sbjct: 648 KNPVLL 653
Score = 134 (52.2 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 53/202 (26%), Positives = 91/202 (45%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P + L G+T+++ A GTNH + + G VY+ +G+L R +E+ + +
Sbjct: 32 PERLPGLCGKTVLQAALGTNHGLLLTEGGEVYS-----FGKLPWRSGPEEFCANS-PILE 85
Query: 280 RNNVLPPEAV-ISAGSVNSSCTAGGGQLYMWGKLKNNGD----DWMY-PKPL-MDLSG-- 330
N +L + ++AGS ++ GG +YMWG ++G + Y P+P + +S
Sbjct: 86 -NTLLGQHVITVAAGSFHNGAVTEGGVVYMWGN-NSSGQCAVANQPYVPEPQPISISDSE 143
Query: 331 ----WNLRCMDSG-NMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMH 385
++R + H + S W +LG + P+KV+ L G
Sbjct: 144 TSPLLSVRVLQLACGEEHTLALSLSREIWAWGSGCQLGLITTTFPVTK-PQKVEHLAGRV 202
Query: 386 VISVACGYGHSLVIVDRTNVGE 407
V+ +ACG HSL +V V E
Sbjct: 203 VLQIACGAYHSLALVQCLPVQE 224
>ZFIN|ZDB-GENE-030616-132 [details] [associations]
symbol:mycbp2 "MYC binding protein 2" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0021986 "habenula
development" evidence=IMP] [GO:0016198 "axon choice point
recognition" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0007411 "axon guidance" evidence=IMP] [GO:0031290 "retinal
ganglion cell axon guidance" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0042068 "regulation of pteridine
metabolic process" evidence=IMP] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-030616-132
GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872
GO:GO:0008270 GO:GO:0016198 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284 GO:GO:0031290
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
GO:GO:0021986 EMBL:BX510646 EMBL:AL840634 EMBL:CR628366
EMBL:CU138551 IPI:IPI00993071 Ensembl:ENSDART00000124901
ArrayExpress:F1QI76 Bgee:F1QI76 GO:GO:0042068 Uniprot:F1QI76
Length = 4648
Score = 144 (55.7 bits), Expect = 7.6e-06, Sum P(2) = 7.6e-06
Identities = 34/87 (39%), Positives = 43/87 (49%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
++R V C H V + G YT+G + GQLGHGD R PT+V L +
Sbjct: 924 ELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGSPTLVQALPGPSTQVT- 982
Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLG 143
AG +HT V+ DG FG GQLG
Sbjct: 983 AGSNHTAVLLMDGQVFTFGSFSKGQLG 1009
Score = 137 (53.3 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 39/135 (28%), Positives = 65/135 (48%)
Query: 201 NEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGR 260
+E KD+S Y P P A+ V+V+CG +H+V + G VYT+G+G +G+
Sbjct: 901 SERGDKDASKITTY---P-PGAVRFDCELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQ 956
Query: 261 LGHREQKDEWVPRRVDVFQRNNVLP-PEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDW 319
LGH + P V LP P ++AGS +++ GQ++ +G
Sbjct: 957 LGHGDVNSRGSPTLVQA------LPGPSTQVTAGSNHTAVLLMDGQVFTFGSFSKG---- 1006
Query: 320 MYPKPLMDLSGWNLR 334
+P++D+ WN +
Sbjct: 1007 QLGRPILDMPYWNAK 1021
Score = 130 (50.8 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 46/166 (27%), Positives = 75/166 (45%)
Query: 83 GRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQL 142
G +ERG KI P V + + + G H+VV+ E+G+ FG+ +HGQL
Sbjct: 899 GSSERGDKD-ASKITTYPPGAVRFDCELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQL 957
Query: 143 GSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT-DN 201
G G + + P+ V+ L T G++ T L ++G + G GQLG D
Sbjct: 958 GHGDVNSRGSPTLVQALPGPSTQVTAGSNHTAVLL-MDG-QVFTFGSFSKGQLGRPILDM 1015
Query: 202 EY-NTKDSSV-KLAYEAQPRPRAIAALAGETIVKV--ACGTNHTVA 243
Y N K S + + + + I A +T +++ A +H +A
Sbjct: 1016 PYWNAKPSPMPNIGAKYGRKATWIGASGDQTFLRIDEALINSHVLA 1061
Score = 86 (35.3 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 25/98 (25%), Positives = 44/98 (44%)
Query: 47 PTRLRPLVGVDIRF-VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
P + + ++ ++ + V C + V +G Y +G+ D I D VS
Sbjct: 617 PYKPKKMIKLETKMAVYTACNNGSSSIVTKDGELYMFGK---------DAIYSDSTCQVS 667
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG 143
+L + + + G++HT V+T+ G FG N GQ G
Sbjct: 668 DLKGHFVTQVAMGKAHTCVLTKSGEVWTFGVNNKGQCG 705
Score = 54 (24.1 bits), Expect = 7.6e-06, Sum P(2) = 7.6e-06
Identities = 15/45 (33%), Positives = 24/45 (53%)
Query: 268 DEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKL 312
D VP D+ ++L PE + +GS ++S T G L++ G L
Sbjct: 1141 DARVPTASDIQALCSILSPELALPSGS-HASTTRSHGALHILGCL 1184
Score = 48 (22.0 bits), Expect = 0.00024, Sum P(3) = 0.00024
Identities = 11/41 (26%), Positives = 17/41 (41%)
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGD 317
V + PP + S + N + G Q + +G N GD
Sbjct: 2658 VLEHGAQTPPPSPFSVQAFNRGMASSGAQGFDYGISNNKGD 2698
Score = 38 (18.4 bits), Expect = 0.00024, Sum P(3) = 0.00024
Identities = 7/13 (53%), Positives = 12/13 (92%)
Query: 159 LVSEVTATACGAD 171
+VSE+TA+A G++
Sbjct: 1684 IVSELTASALGSE 1696
>UNIPROTKB|C9JMJ4 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 IPI:IPI00925317
ProteinModelPortal:C9JMJ4 SMR:C9JMJ4 STRING:C9JMJ4
Ensembl:ENST00000419074 ArrayExpress:C9JMJ4 Bgee:C9JMJ4
Uniprot:C9JMJ4
Length = 272
Score = 151 (58.2 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 59/222 (26%), Positives = 97/222 (43%)
Query: 49 RLRP-LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR--PTIVS 105
R +P LV + V A H V + G+ Y++G N+ G LG ++ P V
Sbjct: 57 RKKPALVSIPEDVVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKV- 115
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW--NKHGQLGS-GSIRNEIEPSPVRCLVSE 162
EL + K+ + AG SHT +T+DG +G + +G +G ++ + P V+ V
Sbjct: 116 ELQE-KVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDVP- 173
Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
V A G D V L++ +G + G + GQLG + + L P+
Sbjct: 174 VVKVASGNDHLVMLTA-DG-DLYTLGCGEQGQLGR-VPELFANRGGRQGLERLLVPKCVM 230
Query: 223 IAALAGETIVKVA---CGTNHTVAVDSKGYVYTWGFGGYGRL 261
+ + V+ CG T A+ +G+VY +G Y +L
Sbjct: 231 LKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQL 272
Score = 144 (55.7 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 55/189 (29%), Positives = 88/189 (46%)
Query: 77 GRCYTWGRNERGQLGHGDKI-QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G T G+ + GQLG G+ + +R +P +VS + + + +A AG HTV +++ G +FG
Sbjct: 35 GLVLTLGQGDVGQLGLGENVMERKKPALVS-IPE-DVVQAEAGGMHTVCLSKSGQVYSFG 92
Query: 136 WNKHGQLGSG-SIR-NEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
N G LG S+ +E+ P V L +V + G T L+ +G L +G
Sbjct: 93 CNDEGALGRDTSVEGSEMVPGKVE-LQEKVVQVSAGDSHTAALTD-DGRVFL------WG 144
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
DN + + L + + +VKVA G +H V + + G +YT
Sbjct: 145 SF---RDN-----NGVIGLLEPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTADGDLYTL 196
Query: 254 GFGGYGRLG 262
G G G+LG
Sbjct: 197 GCGEQGQLG 205
>UNIPROTKB|E1BIS5 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104312 CTD:81554 OMA:MVTLAKS
EMBL:DAAA02058190 IPI:IPI00705939 RefSeq:NP_001179275.1
UniGene:Bt.1520 Ensembl:ENSBTAT00000015608 GeneID:513273
KEGG:bta:513273 NextBio:20870790 Uniprot:E1BIS5
Length = 464
Score = 156 (60.0 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 78/308 (25%), Positives = 127/308 (41%)
Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEI--EPSPVRCLVS---EVTA 165
++ + GR+H++V+T+ + G N +GQ G + NEI E V + +V
Sbjct: 175 RVLQVSCGRAHSLVLTDGEGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQDFDGQVVQ 234
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
ACG D +++L+ +G + + G GQ G G YN + KL +
Sbjct: 235 VACGQDHSLFLTD-QG-EVYSCGWGADGQTGLG---HYNITSTPTKLGGD---------- 279
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEW-VPRRVDVFQRNNVL 284
LAG +V+VA + +AV + G ++ WG Y +L + VPR + V
Sbjct: 280 LAGVNVVQVATYGDCCLAVSADGGLFGWGNSEYLQLASVTDSTQVNVPRCLPFSGVGQV- 338
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWGK-LKNNGDDW-------MYPKPLMDLSGWNLRCM 336
+A + G + G G +++WG + G + M P L LS +N
Sbjct: 339 -KQA--ACGGTGCAVLNGEGHVFVWGYGILGKGPNLLETALPEMIPPTLFGLSEFNPGVQ 395
Query: 337 DSG---NMHHFVGADS--SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVAC 391
S + HF + WG G LG G + P +V + G + VAC
Sbjct: 396 VSRIRCGLSHFAALTNRGELFVWGKNIRGCLGIGRL--EDQYFPWRVT-MPG-EPMDVAC 451
Query: 392 GYGHSLVI 399
G H + +
Sbjct: 452 GVDHMVTL 459
Score = 150 (57.9 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 62/257 (24%), Positives = 107/257 (41%)
Query: 26 GSTCWDAVGRRKGALDGNLVSPT-RLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGR 84
G+ + GR+ ++ + S + R+ + D + V C H + + +G Y+ G
Sbjct: 199 GNNSYGQCGRK--VVENEIYSESHRVHRMQDFDGQVVQVACGQDHSLFLTDQGEVYSCGW 256
Query: 85 NERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG 143
GQ G G PT + +L+ + + + V+ DG FGW L
Sbjct: 257 GADGQTGLGHYNITSTPTKLGGDLAGVNVVQVATYGDCCLAVSADGG--LFGWGNSEYLQ 314
Query: 144 SGSIRNEIEPSPVRCL----VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
S+ + + + RCL V +V ACG L+ EG + G YG LG G
Sbjct: 315 LASVTDSTQVNVPRCLPFSGVGQVKQAACGGTGCAVLNG-EG-HVFVWG---YGILGKGP 369
Query: 200 DNEYNTKDSSVKLAYEAQPRPRAIAAL-AGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
N +++ L P ++ G + ++ CG +H A+ ++G ++ WG
Sbjct: 370 ----NLLETA--LPEMIPPTLFGLSEFNPGVQVSRIRCGLSHFAALTNRGELFVWGKNIR 423
Query: 259 GRLGHREQKDEWVPRRV 275
G LG +D++ P RV
Sbjct: 424 GCLGIGRLEDQYFPWRV 440
Score = 147 (56.8 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 57/226 (25%), Positives = 98/226 (43%)
Query: 148 RNEIEPSPVRC-LVSEVTATACGADFTVWLSSVEGAS-ILNAGLPQYGQLGHGTDNEYNT 205
R I+P P R L ++++ ACG FT+ S + + + GL + QLG + T
Sbjct: 93 RRRIQPVPYRLELDQKISSAACGYGFTLLSSKTKDITKVWGMGLNKDSQLGFHRSRKDKT 152
Query: 206 KDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHT-VAVDSKGYVYTWGFGGYGRLGHR 264
+ L E P P + +++V+CG H+ V D +G V++ G YG+ G +
Sbjct: 153 RGYEYVL--EPSPVPLPLDRPQETRVLQVSCGRAHSLVLTDGEG-VFSMGNNSYGQCGRK 209
Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM--WGKLKNNG----DD 318
++E V + + ++ G +S G++Y WG G +
Sbjct: 210 VVENEIYSESHRVHRMQDFDGQVVQVACGQDHSLFLTDQGEVYSCGWGADGQTGLGHYNI 269
Query: 319 WMYPKPLM-DLSGWNL-RCMDSGNMHHFVGADSSCISWGHAQYGEL 362
P L DL+G N+ + G+ V AD WG+++Y +L
Sbjct: 270 TSTPTKLGGDLAGVNVVQVATYGDCCLAVSADGGLFGWGNSEYLQL 315
Score = 145 (56.1 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 85/332 (25%), Positives = 134/332 (40%)
Query: 106 ELSKYKIKKAGAGRSHTVVV--TEDGNSL-AFGWNKHGQLGSGSIRNE--------IEPS 154
EL + KI A G T++ T+D + G NK QLG R + +EPS
Sbjct: 104 ELDQ-KISSAACGYGFTLLSSKTKDITKVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPS 162
Query: 155 PV-----RCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT-DNEYNTKDS 208
PV R + V +CG ++ L+ EG + + G YGQ G +NE
Sbjct: 163 PVPLPLDRPQETRVLQVSCGRAHSLVLTDGEG--VFSMGNNSYGQCGRKVVENEI----- 215
Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
Y R + G+ +V+VACG +H++ + +G VY+ G+G G+ G
Sbjct: 216 -----YSESHRVHRMQDFDGQ-VVQVACGQDHSLFLTDQGEVYSCGWGADGQTGLGHYNI 269
Query: 269 EWVPRRV--DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG-----KLKNNGDDWMY 321
P ++ D+ N V V + G + +A GG L+ WG +L + D
Sbjct: 270 TSTPTKLGGDLAGVNVV----QVATYGDCCLAVSADGG-LFGWGNSEYLQLASVTDSTQV 324
Query: 322 PKP-LMDLSGWNL--RCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV 378
P + SG + G + + WG YG LG GP +A+P+ +
Sbjct: 325 NVPRCLPFSGVGQVKQAACGGTGCAVLNGEGHVFVWG---YGILGKGP-NLLETALPEMI 380
Query: 379 --------DILEGMHVISVACGYGHSLVIVDR 402
+ G+ V + CG H + +R
Sbjct: 381 PPTLFGLSEFNPGVQVSRIRCGLSHFAALTNR 412
Score = 133 (51.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 55/263 (20%), Positives = 103/263 (39%)
Query: 57 DIRFVAAGCVSCHC-VAVDVEGRCYTWGRNERGQLGHG---DKIQRDRPTIVSELSKY-- 110
+ R + C H V D EG ++ G N GQ G ++I + V + +
Sbjct: 173 ETRVLQVSCGRAHSLVLTDGEG-VFSMGNNSYGQCGRKVVENEIYSESHR-VHRMQDFDG 230
Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGA 170
++ + G+ H++ +T+ G + GW GQ G G P+ + ++ V
Sbjct: 231 QVVQVACGQDHSLFLTDQGEVYSCGWGADGQTGLGHYNITSTPTKLGGDLAGVNVVQVAT 290
Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
L+ + G +Y QL TD+ + V + PR +
Sbjct: 291 YGDCCLAVSADGGLFGWGNSEYLQLASVTDS------TQVNV-------PRCLPFSGVGQ 337
Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQK--DEWVPRRVDVFQRNNVLPPEA 288
+ + ACG ++ +G+V+ WG+G G+ + + E +P + N +
Sbjct: 338 VKQAACGGTGCAVLNGEGHVFVWGYGILGKGPNLLETALPEMIPPTLFGLSEFNPGVQVS 397
Query: 289 VISAGSVNSSCTAGGGQLYMWGK 311
I G + + G+L++WGK
Sbjct: 398 RIRCGLSHFAALTNRGELFVWGK 420
>UNIPROTKB|E1BH40 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051493 "regulation of cytoskeleton organization"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0032880 "regulation of protein localization"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0021952 "central
nervous system projection neuron axonogenesis" evidence=IEA]
[GO:0021785 "branchiomotor neuron axon guidance" evidence=IEA]
[GO:0015630 "microtubule cytoskeleton" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872 GO:GO:0030424
GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 KO:K10693
PANTHER:PTHR12846 CTD:23077 GO:GO:0021785 OMA:LLSILHW
EMBL:DAAA02033607 EMBL:DAAA02033608 EMBL:DAAA02033609
EMBL:DAAA02033610 IPI:IPI00705654 RefSeq:NP_001179746.1
UniGene:Bt.105085 Ensembl:ENSBTAT00000025100 GeneID:534496
KEGG:bta:534496 NextBio:20876421 Uniprot:E1BH40
Length = 4640
Score = 139 (54.0 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 40/116 (34%), Positives = 53/116 (45%)
Query: 31 DAVGRRKGALDGNLVS---PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNER 87
D G R G D + ++ P +R ++R V C H V + G YT+G +
Sbjct: 875 DGSGER-GEKDASKITTYPPGSVR--FDCELRAVQVSCGFHHSVVLMENGDVYTFGYGQH 931
Query: 88 GQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG 143
GQLGHGD R PT+V L + AG +HT + DG FG GQLG
Sbjct: 932 GQLGHGDVNSRGCPTLVQALPGPSTQVT-AGSNHTAALLMDGQVFTFGSFSKGQLG 986
Score = 135 (52.6 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 31/104 (29%), Positives = 54/104 (51%)
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP-PEAVI 290
V+V+CG +H+V + G VYT+G+G +G+LGH + P V LP P +
Sbjct: 905 VQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQA------LPGPSTQV 958
Query: 291 SAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLR 334
+AGS +++ GQ++ +G +P++D+ WN +
Sbjct: 959 TAGSNHTAALLMDGQVFTFGSFSKG----QLGRPILDVPYWNAK 998
Score = 86 (35.3 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 29/123 (23%), Positives = 51/123 (41%)
Query: 22 LLFCGSTCWDAVGRR-KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
+ F GS G K P ++ + G + + A S ++ D G Y
Sbjct: 565 IFFTGSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSVISKD--GELY 622
Query: 81 TWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
+G+ D I D ++V++L + + + G++HT V+ ++G FG N G
Sbjct: 623 MFGK---------DAIYSDSSSLVTDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKG 673
Query: 141 QLG 143
Q G
Sbjct: 674 QCG 676
Score = 45 (20.9 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 268 DEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKL 312
D +P D+ R ++L PE + GS + T L++ G L
Sbjct: 1118 DARLPSAADMQSRCSILSPELALPTGS-RALTTRSHAALHILGCL 1161
>UNIPROTKB|F1RP77 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051493 "regulation of cytoskeleton organization"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0032880 "regulation of protein localization"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0021952 "central
nervous system projection neuron axonogenesis" evidence=IEA]
[GO:0021785 "branchiomotor neuron axon guidance" evidence=IEA]
[GO:0015630 "microtubule cytoskeleton" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872 GO:GO:0030424
GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
GO:GO:0021785 OMA:LLSILHW EMBL:CU457401 EMBL:CT978653 EMBL:CU041349
Ensembl:ENSSSCT00000010386 Uniprot:F1RP77
Length = 4460
Score = 143 (55.4 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 41/116 (35%), Positives = 54/116 (46%)
Query: 31 DAVGRRKGALDGNLVS---PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNER 87
D G R G D + ++ P +R ++R V C H V + G YT+G +
Sbjct: 788 DGSGER-GEKDASKITTYPPGSVR--FDCELRAVQVSCGFHHSVVLMENGDVYTFGYGQH 844
Query: 88 GQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG 143
GQLGHGD R PT+V L + AG +HT V+ DG FG GQLG
Sbjct: 845 GQLGHGDVNSRGCPTLVQALPGPSTQVT-AGSNHTAVLLMDGQVFTFGSFSKGQLG 899
Score = 134 (52.2 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 31/104 (29%), Positives = 54/104 (51%)
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP-PEAVI 290
V+V+CG +H+V + G VYT+G+G +G+LGH + P V LP P +
Sbjct: 818 VQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQA------LPGPSTQV 871
Query: 291 SAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLR 334
+AGS +++ GQ++ +G +P++D+ WN +
Sbjct: 872 TAGSNHTAVLLMDGQVFTFGSFSKG----QLGRPILDVPYWNAK 911
Score = 86 (35.3 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 29/123 (23%), Positives = 51/123 (41%)
Query: 22 LLFCGSTCWDAVGRR-KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
+ F GS G K P ++ + G + + A S ++ D G Y
Sbjct: 478 IFFTGSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSVISKD--GELY 535
Query: 81 TWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
+G+ D I D ++V++L + + + G++HT V+ ++G FG N G
Sbjct: 536 MFGK---------DAIYSDSSSLVTDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKG 586
Query: 141 QLG 143
Q G
Sbjct: 587 QCG 589
Score = 43 (20.2 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 13/45 (28%), Positives = 20/45 (44%)
Query: 268 DEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKL 312
D +P D R ++L PE + AG + T L++ G L
Sbjct: 1031 DARLPSAADTQSRCSILSPELALPAGP-RALTTRSHAALHILGCL 1074
>UNIPROTKB|F1PB36 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0046872 GO:GO:0008270 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
EMBL:AAEX03013255 EMBL:AAEX03013256 EMBL:AAEX03013257
Ensembl:ENSCAFT00000008311 Uniprot:F1PB36
Length = 4640
Score = 143 (55.4 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 41/116 (35%), Positives = 54/116 (46%)
Query: 31 DAVGRRKGALDGNLVS---PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNER 87
D G R G D + ++ P +R ++R V C H V + G YT+G +
Sbjct: 875 DGSGER-GEKDASKITTYPPGSVR--FDCELRAVQVSCGFHHSVVLMENGDVYTFGYGQH 931
Query: 88 GQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG 143
GQLGHGD R PT+V L + AG +HT V+ DG FG GQLG
Sbjct: 932 GQLGHGDVNSRGCPTLVQALPGPSTQVT-AGSNHTAVLLMDGQVFTFGSFSKGQLG 986
Score = 134 (52.2 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 31/104 (29%), Positives = 54/104 (51%)
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP-PEAVI 290
V+V+CG +H+V + G VYT+G+G +G+LGH + P V LP P +
Sbjct: 905 VQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQA------LPGPSTQV 958
Query: 291 SAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLR 334
+AGS +++ GQ++ +G +P++D+ WN +
Sbjct: 959 TAGSNHTAVLLMDGQVFTFGSFSKG----QLGRPILDVPYWNAK 998
Score = 86 (35.3 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 29/123 (23%), Positives = 51/123 (41%)
Query: 22 LLFCGSTCWDAVGRR-KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
+ F GS G K P ++ + G + + A S ++ D G Y
Sbjct: 565 IFFTGSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSVISKD--GELY 622
Query: 81 TWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
+G+ D I D ++V++L + + + G++HT V+ ++G FG N G
Sbjct: 623 MFGK---------DAIYSDSSSLVTDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKG 673
Query: 141 QLG 143
Q G
Sbjct: 674 QCG 676
Score = 45 (20.9 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 268 DEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKL 312
D +P D+ R ++L PE + GS + T L++ G L
Sbjct: 1118 DARLPSATDMQSRCSILSPELALPTGS-RALTTRSHAALHILGCL 1161
>UNIPROTKB|O75592 [details] [associations]
symbol:MYCBP2 "Probable E3 ubiquitin-protein ligase MYCBP2"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0015630 "microtubule cytoskeleton"
evidence=IEA] [GO:0021785 "branchiomotor neuron axon guidance"
evidence=IEA] [GO:0021952 "central nervous system projection neuron
axonogenesis" evidence=IEA] [GO:0030424 "axon" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0051493 "regulation of cytoskeleton organization" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415
Prosite:PS00518 GO:GO:0005634 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0015630 GO:GO:0006355 GO:GO:0046872 GO:GO:0016874
GO:GO:0030424 GO:GO:0008270 GO:GO:0032880 GO:GO:0006351
GO:GO:0016567 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0021952 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 CleanEx:HS_PAM InterPro:IPR004939
PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005 EMBL:AC001226
InterPro:IPR017868 EMBL:CH471093 PROSITE:PS50194 KO:K10693
PANTHER:PTHR12846 EMBL:AF075587 EMBL:AL159154 EMBL:AL159158
EMBL:AL359257 EMBL:AB020723 EMBL:BC037971 EMBL:AF083244
IPI:IPI00289776 IPI:IPI01014189 RefSeq:NP_055872.4
UniGene:Hs.591221 ProteinModelPortal:O75592 SMR:O75592
DIP:DIP-28142N IntAct:O75592 MINT:MINT-1632199 STRING:O75592
PhosphoSite:O75592 PaxDb:O75592 PRIDE:O75592
Ensembl:ENST00000357337 Ensembl:ENST00000544440 GeneID:23077
KEGG:hsa:23077 UCSC:uc010aev.3 CTD:23077 GeneCards:GC13M077618
HGNC:HGNC:23386 HPA:HPA039945 MIM:610392 neXtProt:NX_O75592
PharmGKB:PA134871126 eggNOG:NOG240798 HOVERGEN:HBG053153
InParanoid:O75592 OrthoDB:EOG4VQ9NB ChiTaRS:MYCBP2 GenomeRNAi:23077
NextBio:44191 ArrayExpress:O75592 Bgee:O75592 CleanEx:HS_MYCBP2
Genevestigator:O75592 GermOnline:ENSG00000005810 GO:GO:0021785
Uniprot:O75592
Length = 4640
Score = 143 (55.4 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 41/116 (35%), Positives = 54/116 (46%)
Query: 31 DAVGRRKGALDGNLVS---PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNER 87
D G R G D + ++ P +R ++R V C H V + G YT+G +
Sbjct: 875 DGSGER-GEKDASKITTYPPGSVR--FDCELRAVQVSCGFHHSVVLMENGDVYTFGYGQH 931
Query: 88 GQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG 143
GQLGHGD R PT+V L + AG +HT V+ DG FG GQLG
Sbjct: 932 GQLGHGDVNSRGCPTLVQALPGPSTQVT-AGSNHTAVLLMDGQVFTFGSFSKGQLG 986
Score = 134 (52.2 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 31/104 (29%), Positives = 54/104 (51%)
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP-PEAVI 290
V+V+CG +H+V + G VYT+G+G +G+LGH + P V LP P +
Sbjct: 905 VQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQA------LPGPSTQV 958
Query: 291 SAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLR 334
+AGS +++ GQ++ +G +P++D+ WN +
Sbjct: 959 TAGSNHTAVLLMDGQVFTFGSFSKG----QLGRPILDVPYWNAK 998
Score = 86 (35.3 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 29/123 (23%), Positives = 51/123 (41%)
Query: 22 LLFCGSTCWDAVGRR-KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
+ F GS G K P ++ + G + + A S ++ D G Y
Sbjct: 565 IFFTGSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSVISKD--GELY 622
Query: 81 TWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
+G+ D I D ++V++L + + + G++HT V+ ++G FG N G
Sbjct: 623 MFGK---------DAIYSDSSSLVTDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKG 673
Query: 141 QLG 143
Q G
Sbjct: 674 QCG 676
Score = 45 (20.9 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 268 DEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKL 312
D +P D+ R ++L PE + GS + T L++ G L
Sbjct: 1118 DARLPSAADMQSRCSILSPELALPTGS-RALTTRSHAALHILGCL 1161
>UNIPROTKB|J3KPZ3 [details] [associations]
symbol:MYCBP2 "Probable E3 ubiquitin-protein ligase MYCBP2"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872 GO:GO:0008270
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.30.40.10 InterPro:IPR014756 InterPro:IPR013083
SUPFAM:SSF81296 InterPro:IPR008979 SUPFAM:SSF49785 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 EMBL:AC001226 InterPro:IPR017868
PROSITE:PS50194 KO:K10693 PANTHER:PTHR12846 EMBL:AL159154
EMBL:AL159158 EMBL:AL359257 RefSeq:NP_055872.4 UniGene:Hs.591221
GeneID:23077 KEGG:hsa:23077 CTD:23077 HGNC:HGNC:23386
ChiTaRS:MYCBP2 OMA:LLSILHW ProteinModelPortal:J3KPZ3
Ensembl:ENST00000407578 Uniprot:J3KPZ3
Length = 4678
Score = 143 (55.4 bits), Expect = 8.3e-05, Sum P(2) = 8.3e-05
Identities = 41/116 (35%), Positives = 54/116 (46%)
Query: 31 DAVGRRKGALDGNLVS---PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNER 87
D G R G D + ++ P +R ++R V C H V + G YT+G +
Sbjct: 913 DGSGER-GEKDASKITTYPPGSVR--FDCELRAVQVSCGFHHSVVLMENGDVYTFGYGQH 969
Query: 88 GQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG 143
GQLGHGD R PT+V L + AG +HT V+ DG FG GQLG
Sbjct: 970 GQLGHGDVNSRGCPTLVQALPGPSTQVT-AGSNHTAVLLMDGQVFTFGSFSKGQLG 1024
Score = 134 (52.2 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 31/104 (29%), Positives = 54/104 (51%)
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP-PEAVI 290
V+V+CG +H+V + G VYT+G+G +G+LGH + P V LP P +
Sbjct: 943 VQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQA------LPGPSTQV 996
Query: 291 SAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLR 334
+AGS +++ GQ++ +G +P++D+ WN +
Sbjct: 997 TAGSNHTAVLLMDGQVFTFGSFSKG----QLGRPILDVPYWNAK 1036
Score = 86 (35.3 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 29/123 (23%), Positives = 51/123 (41%)
Query: 22 LLFCGSTCWDAVGRR-KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
+ F GS G K P ++ + G + + A S ++ D G Y
Sbjct: 603 IFFTGSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSVISKD--GELY 660
Query: 81 TWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
+G+ D I D ++V++L + + + G++HT V+ ++G FG N G
Sbjct: 661 MFGK---------DAIYSDSSSLVTDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKG 711
Query: 141 QLG 143
Q G
Sbjct: 712 QCG 714
Score = 45 (20.9 bits), Expect = 8.3e-05, Sum P(2) = 8.3e-05
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 268 DEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKL 312
D +P D+ R ++L PE + GS + T L++ G L
Sbjct: 1156 DARLPSAADMQSRCSILSPELALPTGS-RALTTRSHAALHILGCL 1199
>UNIPROTKB|J9PB77 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0046872 GO:GO:0008270 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 PROSITE:PS00626 PROSITE:PS50012
InterPro:IPR004939 PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194
GeneTree:ENSGT00390000011403 PANTHER:PTHR12846 OMA:LLSILHW
EMBL:AAEX03013255 EMBL:AAEX03013256 EMBL:AAEX03013257
Ensembl:ENSCAFT00000044597 Uniprot:J9PB77
Length = 4727
Score = 143 (55.4 bits), Expect = 8.5e-05, Sum P(2) = 8.5e-05
Identities = 41/116 (35%), Positives = 54/116 (46%)
Query: 31 DAVGRRKGALDGNLVS---PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNER 87
D G R G D + ++ P +R ++R V C H V + G YT+G +
Sbjct: 913 DGSGER-GEKDASKITTYPPGSVR--FDCELRAVQVSCGFHHSVVLMENGDVYTFGYGQH 969
Query: 88 GQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG 143
GQLGHGD R PT+V L + AG +HT V+ DG FG GQLG
Sbjct: 970 GQLGHGDVNSRGCPTLVQALPGPSTQVT-AGSNHTAVLLMDGQVFTFGSFSKGQLG 1024
Score = 134 (52.2 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 31/104 (29%), Positives = 54/104 (51%)
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP-PEAVI 290
V+V+CG +H+V + G VYT+G+G +G+LGH + P V LP P +
Sbjct: 943 VQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQA------LPGPSTQV 996
Query: 291 SAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLR 334
+AGS +++ GQ++ +G +P++D+ WN +
Sbjct: 997 TAGSNHTAVLLMDGQVFTFGSFSKG----QLGRPILDVPYWNAK 1036
Score = 86 (35.3 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 29/123 (23%), Positives = 51/123 (41%)
Query: 22 LLFCGSTCWDAVGRR-KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
+ F GS G K P ++ + G + + A S ++ D G Y
Sbjct: 603 IFFTGSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSVISKD--GELY 660
Query: 81 TWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
+G+ D I D ++V++L + + + G++HT V+ ++G FG N G
Sbjct: 661 MFGK---------DAIYSDSSSLVTDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKG 711
Query: 141 QLG 143
Q G
Sbjct: 712 QCG 714
Score = 45 (20.9 bits), Expect = 8.5e-05, Sum P(2) = 8.5e-05
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 268 DEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKL 312
D +P D+ R ++L PE + GS + T L++ G L
Sbjct: 1156 DARLPSATDMQSRCSILSPELALPTGS-RALTTRSHAALHILGCL 1199
>WB|WBGene00004304 [details] [associations]
symbol:ran-3 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0051301 "cell division" evidence=IMP] [GO:0000910
"cytokinesis" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0016246 "RNA interference" evidence=IMP] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0009792 GO:GO:0040010
GO:GO:0007067 GO:GO:0007052 GO:GO:0002119 GO:GO:0016246
GO:GO:0000910 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 GO:GO:0040035 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184 EMBL:Z54327
GeneTree:ENSGT00700000104160 PIR:T19483 RefSeq:NP_495753.1
ProteinModelPortal:Q18211 SMR:Q18211 IntAct:Q18211 STRING:Q18211
PaxDb:Q18211 EnsemblMetazoa:C26D10.1.1 EnsemblMetazoa:C26D10.1.2
GeneID:174332 KEGG:cel:CELE_C26D10.1 UCSC:C26D10.1 CTD:174332
WormBase:C26D10.1 HOGENOM:HOG000016067 InParanoid:Q18211
OMA:TEPNDVE NextBio:883582 Uniprot:Q18211
Length = 569
Score = 137 (53.3 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 53/187 (28%), Positives = 77/187 (41%)
Query: 78 RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIK--KAGAGRSHTVVVTEDGNSLAFG 135
R + G E LGH + +P V + +K +A AG H+ V+T +G G
Sbjct: 153 RVLSCGEGEA--LGHPGRTTTKKPRKVDIFEEEGLKPLQAVAGGVHSAVLTSEGEVYMCG 210
Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
N+ G + + + E + E G V L++ GAS A Q +
Sbjct: 211 INEKGTVPAEGVEKEGSTDEFAKVKFEEDIEKEGK--IVMLAA--GASFTAALTDQGSVI 266
Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
G N L ++ Q P I A IVK+A G NH V +D KG + T+G
Sbjct: 267 AWGNLRNSNGNVDVHPLLHKMQEAPVVIVHQAKRKIVKIAAGENHLVMLDEKGCLLTFGD 326
Query: 256 GGYGRLG 262
G G+LG
Sbjct: 327 GEMGQLG 333
Score = 117 (46.2 bits), Expect = 9.3e-06, Sum P(2) = 9.3e-06
Identities = 64/227 (28%), Positives = 90/227 (39%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWG--RNERGQLG-HG--DKIQRDRPTIVSELSKYKI 112
I +AAG + A+ +G WG RN G + H K+Q + P ++ +K KI
Sbjct: 246 IVMLAAG--ASFTAALTDQGSVIAWGNLRNSNGNVDVHPLLHKMQ-EAPVVIVHQAKRKI 302
Query: 113 KKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC------LVSEVTAT 166
K AG +H V++ E G L FG + GQLG S R + S C L+ +
Sbjct: 303 VKIAAGENHLVMLDEKGCLLTFGDGEMGQLGRSS-RTKTIRSKYMCDESGDHLLVPLRFK 361
Query: 167 ACGADFTVWLSSVEGA---SILNA--------GLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
G F V +V + +I++ GL Y QLG D +D
Sbjct: 362 HKGKFFDVVAKNVFASGFWTIVHGEDGKYYAFGLNNYAQLGIKVDEADVGQDGQDNRELR 421
Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
A A A T V + G H V + S G V+ G LG
Sbjct: 422 VFLPAEAPAFGAERTFVNIE-GVQHVVILGSDGKVFAMGKNTDNALG 467
Score = 62 (26.9 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 15/59 (25%), Positives = 29/59 (49%)
Query: 348 DSSCISWGHAQYGELGYG--PYGQKSSAMPKKVDI--LEGMHVISVACGYGHSLVIVDR 402
D + +WG G+LG G +K + P+++ L+G +I + H+L+I +
Sbjct: 510 DGTAYAWGFDTTGQLGLGLKDEDEKMVSKPEEISSAHLDGYSIIGASISDQHTLIIAKK 568
>UNIPROTKB|F1RJL0 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104312 OMA:MVTLAKS
EMBL:FP326664 RefSeq:XP_003354559.2 Ensembl:ENSSSCT00000008468
GeneID:100513850 KEGG:ssc:100513850 Uniprot:F1RJL0
Length = 470
Score = 153 (58.9 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 78/308 (25%), Positives = 126/308 (40%)
Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEI--EPSPVRCLVS---EVTA 165
++ + GR+H++V+T+ + G N +GQ G + NEI E V + +V
Sbjct: 181 QVLQVSCGRAHSLVLTDGEGVFSMGNNSYGQCGRKVVENEIYSESHKVHRMQDFDGQVVQ 240
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
ACG D +++L+ +G + + G GQ G G YN + KL +
Sbjct: 241 VACGQDHSLFLTD-KG-EVYSCGWGADGQTGLG---HYNITSAPTKLGGD---------- 285
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEW-VPRRVDVFQRNNVL 284
LAG +V+VA + +AV + G ++ WG Y +L + VPR + V
Sbjct: 286 LAGVNVVQVATYGDCCLAVSADGSLFGWGNSEYLQLASVTDSTQVNVPRCLPFSGVGQV- 344
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWGK-LKNNGDDW-------MYPKPLMDLSGWNLRCM 336
+A + G + G G +++WG + G + M P L L+ N
Sbjct: 345 -KQA--ACGGTGCAVLNGEGHVFVWGYGILGKGPNLVETALPEMIPPTLFGLTELNPEVR 401
Query: 337 DSG---NMHHFVG-AD-SSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVAC 391
S + HF D WG G LG G + P +V + G + VAC
Sbjct: 402 VSRIRCGLSHFAALTDRGELFVWGKNIRGCLGIGRL--EDQYFPWRVT-MPG-EPVDVAC 457
Query: 392 GYGHSLVI 399
G H + +
Sbjct: 458 GVDHMVTL 465
Score = 150 (57.9 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 85/334 (25%), Positives = 134/334 (40%)
Query: 106 ELSKYKIKKAGAGRSHTVVV--TEDGNSL-AFGWNKHGQLGSGSIRNE--------IEPS 154
EL + KI A G T++ T D + G NK QLG R + +EPS
Sbjct: 110 ELDQ-KISSAACGYGFTLLSSKTRDVTKVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPS 168
Query: 155 PV-----RCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT-DNEYNTKDS 208
PV R ++V +CG ++ L+ EG + + G YGQ G +NE ++
Sbjct: 169 PVPLPLHRPQETQVLQVSCGRAHSLVLTDGEG--VFSMGNNSYGQCGRKVVENEIYSESH 226
Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
V + Q G+ +V+VACG +H++ + KG VY+ G+G G+ G
Sbjct: 227 KV---HRMQD-------FDGQ-VVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNI 275
Query: 269 EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQLYMWGKLKNNGDDWMYPKPLM 326
P ++ L V+ + C A G L+ WG +++ +
Sbjct: 276 TSAPTKL-----GGDLAGVNVVQVATYGDCCLAVSADGSLFGWGN-----SEYLQLASVT 325
Query: 327 DLSGWNL-RCMDS---GNMHHFVGADSSCI---SWGHA---QYGELGYGPYGQKSSAMPK 376
D + N+ RC+ G + + C GH YG LG GP +A+P+
Sbjct: 326 DSTQVNVPRCLPFSGVGQVKQAACGGTGCAVLNGEGHVFVWGYGILGKGP-NLVETALPE 384
Query: 377 KVD-ILEGM-------HVISVACGYGHSLVIVDR 402
+ L G+ V + CG H + DR
Sbjct: 385 MIPPTLFGLTELNPEVRVSRIRCGLSHFAALTDR 418
Score = 149 (57.5 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 65/257 (25%), Positives = 108/257 (42%)
Query: 26 GSTCWDAVGRRKGALDGNLVSPT-RLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGR 84
G+ + GR+ ++ + S + ++ + D + V C H + + +G Y+ G
Sbjct: 205 GNNSYGQCGRK--VVENEIYSESHKVHRMQDFDGQVVQVACGQDHSLFLTDKGEVYSCGW 262
Query: 85 NERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG 143
GQ G G PT + +L+ + + + V+ DG SL FGW L
Sbjct: 263 GADGQTGLGHYNITSAPTKLGGDLAGVNVVQVATYGDCCLAVSADG-SL-FGWGNSEYLQ 320
Query: 144 SGSIRNEIEPSPVRCL----VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
S+ + + + RCL V +V ACG L+ EG + G YG LG G
Sbjct: 321 LASVTDSTQVNVPRCLPFSGVGQVKQAACGGTGCAVLNG-EG-HVFVWG---YGILGKGP 375
Query: 200 DNEYNTKDSSVKLAYEAQPRPRAIAALAGETIV-KVACGTNHTVAVDSKGYVYTWGFGGY 258
N +++ L P + L E V ++ CG +H A+ +G ++ WG
Sbjct: 376 ----NLVETA--LPEMIPPTLFGLTELNPEVRVSRIRCGLSHFAALTDRGELFVWGKNIR 429
Query: 259 GRLGHREQKDEWVPRRV 275
G LG +D++ P RV
Sbjct: 430 GCLGIGRLEDQYFPWRV 446
Score = 134 (52.2 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 60/268 (22%), Positives = 106/268 (39%)
Query: 57 DIRFVAAGCVSCHC-VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKY----- 110
+ + + C H V D EG ++ G N GQ G K+ + I SE K
Sbjct: 179 ETQVLQVSCGRAHSLVLTDGEG-VFSMGNNSYGQCGR--KVVENE--IYSESHKVHRMQD 233
Query: 111 ---KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
++ + G+ H++ +T+ G + GW GQ G G P+ + ++ V
Sbjct: 234 FDGQVVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSAPTKLGGDLAGVNVVQ 293
Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALA 227
L+ S+ G +Y QL TD+ + V + PR +
Sbjct: 294 VATYGDCCLAVSADGSLFGWGNSEYLQLASVTDS------TQVNV-------PRCLPFSG 340
Query: 228 GETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQK--DEWVPRRVDVFQRNNVLP 285
+ + ACG ++ +G+V+ WG+G G+ + + E +P + F + P
Sbjct: 341 VGQVKQAACGGTGCAVLNGEGHVFVWGYGILGKGPNLVETALPEMIPPTL--FGLTELNP 398
Query: 286 PEAV--ISAGSVNSSCTAGGGQLYMWGK 311
V I G + + G+L++WGK
Sbjct: 399 EVRVSRIRCGLSHFAALTDRGELFVWGK 426
>UNIPROTKB|C9JRH2 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 OrthoDB:EOG4320Z9
IPI:IPI00927389 ProteinModelPortal:C9JRH2 SMR:C9JRH2 STRING:C9JRH2
Ensembl:ENST00000427469 ArrayExpress:C9JRH2 Bgee:C9JRH2
Uniprot:C9JRH2
Length = 230
Score = 144 (55.7 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 55/189 (29%), Positives = 88/189 (46%)
Query: 77 GRCYTWGRNERGQLGHGDKI-QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G T G+ + GQLG G+ + +R +P +VS + + + +A AG HTV +++ G +FG
Sbjct: 35 GLVLTLGQGDVGQLGLGENVMERKKPALVS-IPE-DVVQAEAGGMHTVCLSKSGQVYSFG 92
Query: 136 WNKHGQLGSG-SIR-NEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
N G LG S+ +E+ P V L +V + G T L+ +G L +G
Sbjct: 93 CNDEGALGRDTSVEGSEMVPGKVE-LQEKVVQVSAGDSHTAALTD-DGRVFL------WG 144
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
DN + + L + + +VKVA G +H V + + G +YT
Sbjct: 145 SF---RDN-----NGVIGLLEPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTADGDLYTL 196
Query: 254 GFGGYGRLG 262
G G G+LG
Sbjct: 197 GCGEQGQLG 205
Score = 127 (49.8 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 46/154 (29%), Positives = 73/154 (47%)
Query: 49 RLRP-LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR--PTIVS 105
R +P LV + V A H V + G+ Y++G N+ G LG ++ P V
Sbjct: 57 RKKPALVSIPEDVVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKV- 115
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW--NKHGQLGS-GSIRNEIEPSPVRCLVSE 162
EL + K+ + AG SHT +T+DG +G + +G +G ++ + P V+ V
Sbjct: 116 ELQE-KVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDVP- 173
Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
V A G D V L++ +G + G + GQLG
Sbjct: 174 VVKVASGNDHLVMLTA-DG-DLYTLGCGEQGQLG 205
Score = 110 (43.8 bits), Expect = 0.00095, P = 0.00095
Identities = 40/148 (27%), Positives = 69/148 (46%)
Query: 229 ETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD--EWVPRRVDVFQRNNVLPP 286
E +V+ G HTV + G VY++G G LG + E VP +V++ ++ V+
Sbjct: 67 EDVVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEK--VVQ- 123
Query: 287 EAVISAGSVNSSCTAGGGQLYMWGKLK-NNGD-DWMYPK-----PLMDLSGWNLRCMDSG 339
+SAG +++ G++++WG + NNG + P P+ + + SG
Sbjct: 124 ---VSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDVPVVKVASG 180
Query: 340 NMHH-FVGADSSCISWGHAQYGELGYGP 366
N H + AD + G + G+LG P
Sbjct: 181 NDHLVMLTADGDLYTLGCGEQGQLGRVP 208
>RGD|1307558 [details] [associations]
symbol:Wbscr16 "Williams-Beuren syndrome chromosome region 16"
species:10116 "Rattus norvegicus" [GO:0005739 "mitochondrion"
evidence=IEA;ISO] RGD:1307558 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
EMBL:CH473973 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104312 CTD:81554 OMA:MVTLAKS
OrthoDB:EOG4F1X33 IPI:IPI00189798 RefSeq:NP_001101802.1
UniGene:Rn.40552 Ensembl:ENSRNOT00000002032 GeneID:360796
KEGG:rno:360796 UCSC:RGD:1307558 NextBio:674123 Uniprot:D4AE90
Length = 461
Score = 151 (58.2 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 75/308 (24%), Positives = 123/308 (39%)
Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEI--EPSPVRCLVS---EVTA 165
K+ + GR+H++V+T+ + G N HGQ G + +E+ E V + +V
Sbjct: 172 KVLQVSCGRAHSLVLTDREGVFSMGNNAHGQCGRKVVEDEVYSESHKVHRMQDFEGQVVQ 231
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
CG D +++L+ +G + + G GQ G G YN + KL +
Sbjct: 232 VVCGQDHSLFLTD-KG-EVYSCGWGADGQTGLG---HYNITSTPSKLGGD---------- 276
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEW-VPRRVDVFQRNNVL 284
LAG T+V+VA + +A+ + G V+ WG Y +L + VPR + V
Sbjct: 277 LAGVTVVQVATYGDCCLALSADGGVFGWGNSEYLQLASVTDSTQVNVPRCLPFSGVGKVK 336
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG--------KLKNNGDDWMYPKPLMDLSGWNLRCM 336
++ G + G +++WG L M P L L+ +N
Sbjct: 337 Q----VACGGTGCAILNEEGHVFVWGYGILGKGPNLSETALPEMIPPTLFGLTEFNPEVK 392
Query: 337 DSG---NMHHFVGADSS--CISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVAC 391
S + HF + WG G LG G + P +V + G + VAC
Sbjct: 393 VSQIRCGLSHFAALTNKGELFVWGKNIRGCLGIGRL--EDQYFPWRVT-MPG-EPVDVAC 448
Query: 392 GYGHSLVI 399
G H + +
Sbjct: 449 GVDHMVTL 456
Score = 150 (57.9 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 64/268 (23%), Positives = 110/268 (41%)
Query: 57 DIRFVAAGCVSCHC-VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKY----- 110
+ + + C H V D EG ++ G N GQ G K+ D + SE K
Sbjct: 170 ETKVLQVSCGRAHSLVLTDREG-VFSMGNNAHGQCGR--KVVEDE--VYSESHKVHRMQD 224
Query: 111 ---KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT- 166
++ + G+ H++ +T+ G + GW GQ G G PS + ++ VT
Sbjct: 225 FEGQVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTPSKLGGDLAGVTVVQ 284
Query: 167 -ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
A D + LS+ G + G +Y QL TD+ + V + PR +
Sbjct: 285 VATYGDCCLALSADGG--VFGWGNSEYLQLASVTDS------TQVNV-------PRCLPF 329
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQK--DEWVPRRVDVFQRNNV 283
+ +VACG ++ +G+V+ WG+G G+ + + E +P + N
Sbjct: 330 SGVGKVKQVACGGTGCAILNEEGHVFVWGYGILGKGPNLSETALPEMIPPTLFGLTEFNP 389
Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWGK 311
+ I G + + G+L++WGK
Sbjct: 390 EVKVSQIRCGLSHFAALTNKGELFVWGK 417
Score = 137 (53.3 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 80/334 (23%), Positives = 131/334 (39%)
Query: 110 YKIKKAGAGRSHTVVV--TEDGNSL-AFGWNKHGQLGSGSIRNE--------IEPSPV-- 156
+KI A G T++ T+D + G NK QLG R + +EPSPV
Sbjct: 104 HKISSAACGYGFTLLSSKTKDVTKVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVPL 163
Query: 157 ---RCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
R ++V +CG ++ L+ EG + + G +GQ G +D
Sbjct: 164 PLDRPQETKVLQVSCGRAHSLVLTDREG--VFSMGNNAHGQCGRKV-----VEDE----V 212
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
Y + + G+ +V+V CG +H++ + KG VY+ G+G G+ G P
Sbjct: 213 YSESHKVHRMQDFEGQ-VVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTPS 271
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQLYMWGKLKNNGDDWMYPKPLMDLSGW 331
++ L V+ + C A G ++ WG +++ + D +
Sbjct: 272 KL-----GGDLAGVTVVQVATYGDCCLALSADGGVFGWGN-----SEYLQLASVTDSTQV 321
Query: 332 NL-RCMDS---GNMHHFVGADSSCI---SWGHA---QYGELGYGPYGQKSSAMPKKVD-I 380
N+ RC+ G + + C GH YG LG GP +A+P+ +
Sbjct: 322 NVPRCLPFSGVGKVKQVACGGTGCAILNEEGHVFVWGYGILGKGP-NLSETALPEMIPPT 380
Query: 381 LEGM-------HVISVACGYGHSLVIVDRTNVGE 407
L G+ V + CG H + TN GE
Sbjct: 381 LFGLTEFNPEVKVSQIRCGLSHFAAL---TNKGE 411
Score = 130 (50.8 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 55/217 (25%), Positives = 89/217 (41%)
Query: 65 CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTV 123
C H + + +G Y+ G GQ G G P+ + +L+ + + +
Sbjct: 234 CGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTPSKLGGDLAGVTVVQVATYGDCCL 293
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL----VSEVTATACGADFTVWLSSV 179
++ DG FGW L S+ + + + RCL V +V ACG L+
Sbjct: 294 ALSADGG--VFGWGNSEYLQLASVTDSTQVNVPRCLPFSGVGKVKQVACGGTGCAILNE- 350
Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIV-KVACGT 238
EG + G YG LG G N +++ L P + E V ++ CG
Sbjct: 351 EG-HVFVWG---YGILGKGP----NLSETA--LPEMIPPTLFGLTEFNPEVKVSQIRCGL 400
Query: 239 NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
+H A+ +KG ++ WG G LG +D++ P RV
Sbjct: 401 SHFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRV 437
>UNIPROTKB|F1P3N0 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104312 OMA:MVTLAKS EMBL:AADN02026016
EMBL:AADN02026017 IPI:IPI00579944 Ensembl:ENSGALT00000001779
Uniprot:F1P3N0
Length = 454
Score = 150 (57.9 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 82/319 (25%), Positives = 131/319 (41%)
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEI--EPSPVRC 158
P + + K ++ + GR+H++V+T+ G N +GQ G + +EI E +
Sbjct: 156 PLPLEKPQKTRVLQVSCGRAHSLVLTDSEGVFTMGNNSYGQCGRKVVEDEIYSESHLIHQ 215
Query: 159 LV---SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
L S V CG D +++ + +GA + G GQ G G YN KL +
Sbjct: 216 LNDFDSRVVQVVCGQDHSLFRTK-KGA-VFACGWGADGQTGLG---HYNITSVPTKLGGD 270
Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH-REQKDEWVPRR 274
+AG IV+V+ + +AV +G ++ WG Y +L E VPR
Sbjct: 271 ----------IAGVNIVQVSSYGDCCLAVSDEGDLFGWGNSEYLQLASVTETTQVNVPRH 320
Query: 275 VDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-LKNNGD---DWMYPKPLM-DLS 329
+ F+ + EA G+ N T G +++WG + G + P+ + L
Sbjct: 321 LP-FKIGKI--KEAACG-GTGNIVLTEEGA-VFVWGYGILGKGPNLTETAVPEMIPPSLF 375
Query: 330 GWNLRCMDSG------NMHHFVGADS--SCISWGHAQYGELGYGPYGQKSSAMPKKVDIL 381
GW+ D + HF + WG G LG G + P +V I
Sbjct: 376 GWSDFSSDVRVARVRCGLSHFAALTNRGELFVWGKNLRGCLGIGR--MEDQYFPWRVTI- 432
Query: 382 EGMHVISVACGYGHSLVIV 400
G V+ VACG H + +V
Sbjct: 433 PG-EVVDVACGVDHMVSMV 450
Score = 144 (55.7 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 64/262 (24%), Positives = 111/262 (42%)
Query: 151 IEPSPVRCLVSE-VTATACGADFTVWLSSVEGAS-ILNAGLPQYGQLGHGTDNEYNTKDS 208
I+ +P R E +T+ ACG FT+ S+ + + GL + QLG TK
Sbjct: 87 IQATPYRLETEEKITSAACGYGFTLLSSNTTDITKVWGMGLNKDSQLGFQRSIRDRTKGY 146
Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHT-VAVDSKGYVYTWGFGGYGRLGHREQK 267
L E P P + +++V+CG H+ V DS+G V+T G YG+ G + +
Sbjct: 147 EYVL--EPSPIPLPLEKPQKTRVLQVSCGRAHSLVLTDSEG-VFTMGNNSYGQCGRKVVE 203
Query: 268 DEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM--WGKLKNNG----DDWMY 321
DE + Q N+ + G +S G ++ WG G +
Sbjct: 204 DEIYSESHLIHQLNDFDSRVVQVVCGQDHSLFRTKKGAVFACGWGADGQTGLGHYNITSV 263
Query: 322 PKPLM-DLSGWNLRCMDS-GNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVD 379
P L D++G N+ + S G+ V + WG+++Y +L + + +P+ +
Sbjct: 264 PTKLGGDIAGVNIVQVSSYGDCCLAVSDEGDLFGWGNSEYLQLASVTETTQVN-VPRHLP 322
Query: 380 ILEGMHVISVACGYGHSLVIVD 401
G + ACG ++V+ +
Sbjct: 323 FKIGK-IKEAACGGTGNIVLTE 343
Score = 139 (54.0 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 58/256 (22%), Positives = 111/256 (43%)
Query: 26 GSTCWDAVGRRKGALDGNLVSPTRL-RPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGR 84
G+ + GR+ ++ + S + L L D R V C H + +G + G
Sbjct: 190 GNNSYGQCGRK--VVEDEIYSESHLIHQLNDFDSRVVQVVCGQDHSLFRTKKGAVFACGW 247
Query: 85 NERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG 143
GQ G G PT + +++ I + + + V+++G+ +G +++ QL
Sbjct: 248 GADGQTGLGHYNITSVPTKLGGDIAGVNIVQVSSYGDCCLAVSDEGDLFGWGNSEYLQLA 307
Query: 144 SGSIRNEIE-PSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNE 202
S + ++ P + + ++ ACG + L+ EGA + G YG LG G
Sbjct: 308 SVTETTQVNVPRHLPFKIGKIKEAACGGTGNIVLTE-EGA-VFVWG---YGILGKGP--- 359
Query: 203 YNTKDSSVKLAYEAQPRPRAIAALAGET-IVKVACGTNHTVAVDSKGYVYTWGFGGYGRL 261
N +++V P + + + + +V CG +H A+ ++G ++ WG G L
Sbjct: 360 -NLTETAVPEMIP--PSLFGWSDFSSDVRVARVRCGLSHFAALTNRGELFVWGKNLRGCL 416
Query: 262 GHREQKDEWVPRRVDV 277
G +D++ P RV +
Sbjct: 417 GIGRMEDQYFPWRVTI 432
Score = 139 (54.0 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 59/261 (22%), Positives = 107/261 (40%)
Query: 59 RFVAAGCVSCHC-VAVDVEGRCYTWGRNERGQLGHG---DKIQRDRPTIVSELSKY--KI 112
R + C H V D EG +T G N GQ G D+I + ++ +L+ + ++
Sbjct: 166 RVLQVSCGRAHSLVLTDSEG-VFTMGNNSYGQCGRKVVEDEIYSESH-LIHQLNDFDSRV 223
Query: 113 KKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADF 172
+ G+ H++ T+ G A GW GQ G G P+ + ++ V +
Sbjct: 224 VQVVCGQDHSLFRTKKGAVFACGWGADGQTGLGHYNITSVPTKLGGDIAGVNIVQVSSYG 283
Query: 173 TVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIV 232
L+ + + G +Y QL T+ T +V PR + G+ I
Sbjct: 284 DCCLAVSDEGDLFGWGNSEYLQLASVTE----TTQVNV---------PRHLPFKIGK-IK 329
Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQK--DEWVPRRVDVFQRNNVLPPEAVI 290
+ ACG + + +G V+ WG+G G+ + + E +P + + + A +
Sbjct: 330 EAACGGTGNIVLTEEGAVFVWGYGILGKGPNLTETAVPEMIPPSLFGWSDFSSDVRVARV 389
Query: 291 SAGSVNSSCTAGGGQLYMWGK 311
G + + G+L++WGK
Sbjct: 390 RCGLSHFAALTNRGELFVWGK 410
Score = 127 (49.8 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 80/330 (24%), Positives = 129/330 (39%)
Query: 111 KIKKAGAGRSHTVVV--TEDGNSL-AFGWNKHGQLG-SGSIRNE-------IEPSPVRCL 159
KI A G T++ T D + G NK QLG SIR+ +EPSP+
Sbjct: 99 KITSAACGYGFTLLSSNTTDITKVWGMGLNKDSQLGFQRSIRDRTKGYEYVLEPSPIPLP 158
Query: 160 VSE-----VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT-DNEYNTKDSSVKLA 213
+ + V +CG ++ L+ EG + G YGQ G ++E ++ +
Sbjct: 159 LEKPQKTRVLQVSCGRAHSLVLTDSEG--VFTMGNNSYGQCGRKVVEDEIYSESHLIHQL 216
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
+ R +V+V CG +H++ KG V+ G+G G+ G VP
Sbjct: 217 NDFDSR-----------VVQVVCGQDHSLFRTKKGAVFACGWGADGQTGLGHYNITSVPT 265
Query: 274 RV--DVFQRNNVLPPEAVISAGSVNSSCTAGG--GQLYMWG-----KLKNNGDDWMY--P 322
++ D+ N ++ S C A G L+ WG +L + + P
Sbjct: 266 KLGGDIAGVN-------IVQVSSYGDCCLAVSDEGDLFGWGNSEYLQLASVTETTQVNVP 318
Query: 323 KPLMDLSGW--NLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV-- 378
+ L G C +GN+ + + + WG YG LG GP +A+P+ +
Sbjct: 319 RHLPFKIGKIKEAACGGTGNI--VLTEEGAVFVWG---YGILGKGP-NLTETAVPEMIPP 372
Query: 379 ------DILEGMHVISVACGYGHSLVIVDR 402
D + V V CG H + +R
Sbjct: 373 SLFGWSDFSSDVRVARVRCGLSHFAALTNR 402
>WB|WBGene00012370 [details] [associations]
symbol:W09G3.7 species:6239 "Caenorhabditis elegans"
[GO:0045132 "meiotic chromosome segregation" evidence=IMP]
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0045132 PRINTS:PR00633
PROSITE:PS50012 EMBL:AL032625 GeneTree:ENSGT00700000104312
EMBL:Z82080 EMBL:AL023854 RefSeq:NP_001021671.2
ProteinModelPortal:G5EEZ1 SMR:G5EEZ1 PRIDE:G5EEZ1
EnsemblMetazoa:W09G3.7a GeneID:173245 KEGG:cel:CELE_W09G3.7
CTD:173245 WormBase:W09G3.7a OMA:RKKVDCA NextBio:878861
Uniprot:G5EEZ1
Length = 404
Score = 149 (57.5 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 100/381 (26%), Positives = 153/381 (40%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DKIQRDRPTIVS 105
P R+ I+F+++G A + R Y G N R Q+G I + + +S
Sbjct: 57 PKRIAYFNTKSIKFISSG-FGFSLFAS--KNRLYGAGINNRFQIGGQLTNINKYQDYYIS 113
Query: 106 ----ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEI----EPSPVR 157
+ +I + +GR+H+++ T G A G N GQ G + E SP+
Sbjct: 114 AKKINIPGDEILEISSGRAHSLIRTNLG-VFAIGDNNFGQCGRNPENMDYVVGSEESPLL 172
Query: 158 CL---VSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
L SE + + C D T ++ GA + + GL + GQ G NE A
Sbjct: 173 PLSFPTSEPIISIHCSMD-TSFVVDSSGA-VFSFGLNEDGQCG----NE----------A 216
Query: 214 YEAQPRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRL-GHREQKDEWV 271
Y Q P + + G I KV+ T+ +A G ++ WG YG+ G ++
Sbjct: 217 YGIQWEPAKVRGDVEGSKIQKVSGSTDTLLACSENGEIFIWGQTEYGQAAGATDEIQLNT 276
Query: 272 PRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG--GQLYMWGK----LKNNGDDWMYP--- 322
R V N L P +I S SS A G +++WG + + P
Sbjct: 277 SRHVA-----NSLGP--IICVDSTQSSVVARNSRGNVFVWGVGVLGMGPEAESLKTPTQM 329
Query: 323 -KPLMDLSGWNLRCMDSGNM-HHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
+PL D G + + +GN + D WG +Y LG G QK P ++
Sbjct: 330 DQPLFD--GKMVTSVSAGNSCMSAINEDGRLFIWGENRYSSLGLGH--QKRQLFPYQL-F 384
Query: 381 LEGMHVISVACGYGHSLVIVD 401
L G V A G HSL +V+
Sbjct: 385 LPG-DVRKAALGPDHSLFLVN 404
>FB|FBgn0002638 [details] [associations]
symbol:Rcc1 "Regulator of chromosome condensation 1 ortholog
(H. sapiens)" species:7227 "Drosophila melanogaster" [GO:0005634
"nucleus" evidence=ISS;NAS;IDA] [GO:0007417 "central nervous system
development" evidence=IDA] [GO:0030261 "chromosome condensation"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS;IDA]
[GO:0007076 "mitotic chromosome condensation" evidence=NAS]
[GO:0005087 "Ran guanyl-nucleotide exchange factor activity"
evidence=ISS;NAS] [GO:0005737 "cytoplasm" evidence=NAS] [GO:0007346
"regulation of mitotic cell cycle" evidence=IDA] [GO:0006607
"NLS-bearing substrate import into nucleus" evidence=IMP]
[GO:0000793 "condensed chromosome" evidence=IDA] [GO:0046822
"regulation of nucleocytoplasmic transport" evidence=IMP]
[GO:0050767 "regulation of neurogenesis" evidence=IMP] [GO:0022008
"neurogenesis" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0007346 GO:GO:0005737 EMBL:AE014296
GO:GO:0051301 GO:GO:0007067 GO:GO:0007417 GO:GO:0046822
GO:GO:0003682 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 GO:GO:0050767 PDB:3MVD PDBsum:3MVD
GeneTree:ENSGT00700000104160 EMBL:X58530 EMBL:AY070540 PIR:S15028
RefSeq:NP_523943.1 RefSeq:NP_729118.1 RefSeq:NP_729119.1
UniGene:Dm.8023 ProteinModelPortal:P25171 SMR:P25171 DIP:DIP-17766N
IntAct:P25171 MINT:MINT-781282 STRING:P25171 PaxDb:P25171
EnsemblMetazoa:FBtr0077074 EnsemblMetazoa:FBtr0077075
EnsemblMetazoa:FBtr0077076 GeneID:38669 KEGG:dme:Dmel_CG10480
CTD:38669 FlyBase:FBgn0002638 InParanoid:P25171 KO:K11493
OMA:PFEAIWA OrthoDB:EOG437PW4 PhylomeDB:P25171 ChiTaRS:Bj1
GenomeRNAi:38669 NextBio:809817 Bgee:P25171 GermOnline:CG10480
Uniprot:P25171
Length = 547
Score = 155 (59.6 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 73/263 (27%), Positives = 117/263 (44%)
Query: 23 LFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTW 82
+F + D+ G +DGN +P L + G +A+G + H V + G+ +T
Sbjct: 147 VFAWGSFRDSHGNMGLTIDGNKRTPIDL--MEGTVCCSIASG--ADHLVILTTAGKVFTV 202
Query: 83 GRNERGQLGH---------GDKIQRD--RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
G E+GQLG G + +RD RPT + +++ K +A ++ + E
Sbjct: 203 GCAEQGQLGRLSERSISGEGRRGKRDLLRPTQLI-ITRAKPFEAIWATNYCTFMRESQTQ 261
Query: 132 L--AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGL 189
+ A G N QL + E +P++ + ++ A G TV L++ S++ G
Sbjct: 262 VIWATGLNNFKQLAHETKGKEFALTPIKTELKDIRHIAGGQHHTVILTTDLKCSVV--GR 319
Query: 190 PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGY 249
P+YG+LG G VK E +P + L E IV V CG + AV G
Sbjct: 320 PEYGRLGLG----------DVKDVVE---KPTIVKKLT-EKIVSVGCGEVCSYAVTIDGK 365
Query: 250 VYTWGFGGYGRLGHREQKDEWVP 272
+Y+WG G +LG + DE P
Sbjct: 366 LYSWGSGVNNQLGVGDGDDELEP 388
Score = 124 (48.7 bits), Expect = 0.00014, P = 0.00014
Identities = 81/335 (24%), Positives = 126/335 (37%)
Query: 75 VEGRCYTWGRNERGQLGHGDKI-QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLA 133
V G G + GQLG G+ I +R R + V+ + AG H +V+T+ G+ +
Sbjct: 40 VLGNVLVCGNGDVGQLGLGEDILERKRLSPVAGIPD--AVDISAGGMHNLVLTKSGDIYS 97
Query: 134 FGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
FG N G LG + + E P L+ C + A +L G +
Sbjct: 98 FGCNDEGALGRDTSEDGSESKPD--LIDLPGKALC-----ISAGDSHSACLLEDG--RVF 148
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
G D+ N + L + R I + G +A G +H V + + G V+T
Sbjct: 149 AWGSFRDSHGN-----MGLTIDGNKRT-PIDLMEGTVCCSIASGADHLVILTTAGKVFTV 202
Query: 254 GF---GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV-ISAGSVNSSCT-AGGGQLYM 308
G G GRL R E + D+ + ++ A A + CT Q +
Sbjct: 203 GCAEQGQLGRLSERSISGEGRRGKRDLLRPTQLIITRAKPFEAIWATNYCTFMRESQTQV 262
Query: 309 -WGKLKNNGDDWMYPKPLMD--LSGWNLRCMD----SGNMHHFV--GADSSCISWGHAQY 359
W NN + + L+ D +G HH V D C G +Y
Sbjct: 263 IWATGLNNFKQLAHETKGKEFALTPIKTELKDIRHIAGGQHHTVILTTDLKCSVVGRPEY 322
Query: 360 GELGYGPYGQKSSAMPKKVDILEGM--HVISVACG 392
G LG G + +K I++ + ++SV CG
Sbjct: 323 GRLGLGDVKD----VVEKPTIVKKLTEKIVSVGCG 353
Score = 119 (46.9 bits), Expect = 0.00048, P = 0.00048
Identities = 81/328 (24%), Positives = 131/328 (39%)
Query: 32 AVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWG--RNERGQ 89
A+GR DG+ P L L G + ++AG C+ D GR + WG R+ G
Sbjct: 105 ALGRDTSE-DGSESKPD-LIDLPGKAL-CISAGDSHSACLLED--GRVFAWGSFRDSHGN 159
Query: 90 LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG---SGS 146
+G I ++ T + + +G H V++T G G + GQLG S
Sbjct: 160 MGL--TIDGNKRTPIDLMEGTVCCSIASGADHLVILTTAGKVFTVGCAEQGQLGRLSERS 217
Query: 147 IRNEIEPSPVRCL-VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNT 205
I E L +++ T +W ++ + + Q G +N
Sbjct: 218 ISGEGRRGKRDLLRPTQLIITRAKPFEAIWATNY--CTFMRESQTQV-IWATGLNN---F 271
Query: 206 KDSSVKLAYEAQPRPRAIAALAGET--IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
K +LA+E + + A+ + E I +A G +HTV + + G YGRLG
Sbjct: 272 K----QLAHETKGKEFALTPIKTELKDIRHIAGGQHHTVILTTDLKCSVVGRPEYGRLGL 327
Query: 264 REQKDEWVPRRVDVFQRNNVLPPEAV-ISAGSVNSSCTAGGGQLYMWGKLKNN------G 316
+ KD V + + ++ L + V + G V S G+LY WG NN G
Sbjct: 328 GDVKD--VVEKPTIVKK---LTEKIVSVGCGEVCSYAVTIDGKLYSWGSGVNNQLGVGDG 382
Query: 317 DDWMYPKPLM--DLSGWNLRCMDSGNMH 342
DD + P ++ + G ++ G H
Sbjct: 383 DDELEPIVVVSKNTQGKHMLLASGGGQH 410
Score = 37 (18.1 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 7/24 (29%), Positives = 13/24 (54%)
Query: 264 REQKDEWVPRRVDVFQRNNVLPPE 287
+EQK+ +P + + N PP+
Sbjct: 458 QEQKEN-LPAKASTSSKKNKTPPQ 480
>UNIPROTKB|C9J3R0 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341
IPI:IPI00926548 ProteinModelPortal:C9J3R0 SMR:C9J3R0 STRING:C9J3R0
PRIDE:C9J3R0 Ensembl:ENST00000434290 ArrayExpress:C9J3R0
Bgee:C9J3R0 Uniprot:C9J3R0
Length = 273
Score = 144 (55.7 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 59/204 (28%), Positives = 97/204 (47%)
Query: 77 GRCYTWGRNERGQLGHGDKI-QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G T G+ + GQLG G+ + +R +P +VS + +A AG HTV +++ G +FG
Sbjct: 43 GLVLTLGQGDVGQLGLGENVMERKKPALVS--IPEDVVQAEAGGMHTVCLSKSGQVYSFG 100
Query: 136 WNKHGQLGSG-SIR-NEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG----L 189
N G LG S+ +E+ P V L +V + G T L+ +G L L
Sbjct: 101 CNDEGALGRDTSVEGSEMVPGKVE-LQEKVVQVSAGDSHTAALTD-DGRVFLWGSFRHCL 158
Query: 190 PQYGQ-LGHGTD-------NEYNTKDSSVKLAYEAQPRPRAIAALAGET---IVKVACGT 238
Q LG G + + +KD++ + +P +++ + + +VKVA G
Sbjct: 159 FHTSQRLGWGKEVWRQGLSHLRVSKDNNGVIGL-LEPMKKSMVPVQVQLDVPVVKVASGN 217
Query: 239 NHTVAVDSKGYVYTWGFGGYGRLG 262
+H V + + G +YT G G G+LG
Sbjct: 218 DHLVMLTADGDLYTLGCGEQGQLG 241
>UNIPROTKB|G4N5N9 [details] [associations]
symbol:MGG_05277 "Alpha-tubulin suppressor protein Aats1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] INTERPRO:IPR000408 Pfam:PF00415
EMBL:CM001233 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 KO:K15462
RefSeq:XP_003712836.1 EnsemblFungi:MGG_05277T0 GeneID:2675298
KEGG:mgr:MGG_05277 Uniprot:G4N5N9
Length = 382
Score = 147 (56.8 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 88/335 (26%), Positives = 135/335 (40%)
Query: 80 YTWGRNERGQLGHGDK--IQRDRPTIVS----ELSKYK---IKKAGAGRSHTVVVTEDGN 130
+ G N GQLG G K I +P + S ELS + + AG +HT+++T+DG
Sbjct: 5 FALGSNGSGQLGIGHKEDISVPKPALFSSAAGELSANPTSPVVQVAAGGNHTLLLTQDGE 64
Query: 131 SLAFGWNKHGQLGSGSIRNEI----EPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
+ G G G S + +P P V A +++ ASI+
Sbjct: 65 IYSSGDPASGACGLKSATADSAGAGQPRPPVFHKIHVPAEQAAQSPGRLIAATWEASIIT 124
Query: 187 AGLPQYGQ-------LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
G + G+ G G+ E +++ + AQP E + AC
Sbjct: 125 -GPDEQGRRNRRVYSFGCGSKGELGQGPLIIRVPF-AQPIAN-FPPPETEVVGLSAC-MG 180
Query: 240 HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSC 299
H VAV S G VY WG G G+LG E PR+++ +P + +A +C
Sbjct: 181 HVVAVLSNGDVYGWGNGRKGQLGAPEGIIT-EPRKIEG------VPFKVAKAACGKEFTC 233
Query: 300 TAG---GGQLYMWGKLKNNGDDWMYPKPLMD-LSGWNLRCMDSGNMHHFVGADSSCISWG 355
G G + + G D W + + GW GN++ + AD S +SWG
Sbjct: 234 LVGEPGSGDILVMGL-----DKWSVQSSAPNSVPGWRDLQASWGNIY-VLQADGSILSWG 287
Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGM-HVISV 389
+G+L P S +PK I G HV+++
Sbjct: 288 RNDHGQLA--P-----SELPKMSQIAVGSEHVVAI 315
Score = 144 (55.7 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 61/241 (25%), Positives = 100/241 (41%)
Query: 78 RCYTWGRNERGQLGHGDKIQR---DRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
R Y++G +G+LG G I R +P + ++ A H V V +G+ +
Sbjct: 135 RVYSFGCGSKGELGQGPLIIRVPFAQPIANFPPPETEVVGLSACMGHVVAVLSNGDVYGW 194
Query: 135 GWNKHGQLGS--GSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQY 192
G + GQLG+ G I EP + + +V ACG +FT + IL GL ++
Sbjct: 195 GNGRKGQLGAPEGIIT---EPRKIEGVPFKVAKAACGKEFTCLVGEPGSGDILVMGLDKW 251
Query: 193 GQLGHGTDNEYNTKDSSVKLA--YEAQPRPRAIA-------ALAGETIVK---VACGTNH 240
++ +D Y Q ++ LA + K +A G+ H
Sbjct: 252 SVQSSAPNSVPGWRDLQASWGNIYVLQADGSILSWGRNDHGQLAPSELPKMSQIAVGSEH 311
Query: 241 TVAVD-SKGYVYTWGFGGYGRLGHREQKDEWVPRRV-DVFQRNNVLPPEAVISAGSVNSS 298
VA+D ++ V WG+G +G G + Q D +V +PP + I+A + S
Sbjct: 312 VVAIDEARQSVAAWGWGEHGNCGPQVQDDNSQGNTGWNVIASAKHIPPGSSITA--IGSG 369
Query: 299 C 299
C
Sbjct: 370 C 370
>MGI|MGI:2179432 [details] [associations]
symbol:Mycbp2 "MYC binding protein 2" species:10090 "Mus
musculus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008045 "motor neuron axon
guidance" evidence=IMP] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0015630 "microtubule cytoskeleton" evidence=IDA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0021785
"branchiomotor neuron axon guidance" evidence=IMP] [GO:0021952
"central nervous system projection neuron axonogenesis"
evidence=IMP] [GO:0030424 "axon" evidence=IDA] [GO:0032880
"regulation of protein localization" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0048667 "cell morphogenesis
involved in neuron differentiation" evidence=IMP] [GO:0051493
"regulation of cytoskeleton organization" evidence=IMP]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 UniPathway:UPA00143 MGI:MGI:2179432
INTERPRO:IPR000408 Pfam:PF00415 Prosite:PS00518 GO:GO:0005634
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0015630 GO:GO:0006355
GO:GO:0046872 GO:GO:0016874 GO:GO:0030424 GO:GO:0008270
GO:GO:0032880 GO:GO:0006351 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 CleanEx:MM_PAM
InterPro:IPR004939 PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194 KO:K10693
PANTHER:PTHR12846 CTD:23077 eggNOG:NOG240798 HOVERGEN:HBG053153
OrthoDB:EOG4VQ9NB ChiTaRS:MYCBP2 GO:GO:0021785 EMBL:AY325887
EMBL:BC059257 IPI:IPI00380409 IPI:IPI00608114 RefSeq:NP_997098.2
UniGene:Mm.6478 PDB:3GBW PDB:3HWJ PDBsum:3GBW PDBsum:3HWJ
ProteinModelPortal:Q7TPH6 SMR:Q7TPH6 IntAct:Q7TPH6 STRING:Q7TPH6
PhosphoSite:Q7TPH6 PaxDb:Q7TPH6 PRIDE:Q7TPH6 DNASU:105689
GeneID:105689 KEGG:mmu:105689 UCSC:uc007uwl.1 HOGENOM:HOG000112908
InParanoid:Q7TPH6 EvolutionaryTrace:Q7TPH6 NextBio:357830
CleanEx:MM_MYCBP2 Genevestigator:Q7TPH6
GermOnline:ENSMUSG00000033004 Uniprot:Q7TPH6
Length = 4711
Score = 133 (51.9 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 32/87 (36%), Positives = 41/87 (47%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
++R V C H V + G YT+G + GQLGHGD R PT+V L +
Sbjct: 901 ELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQVTA 960
Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLG 143
+HT V+ DG FG GQLG
Sbjct: 961 CS-NHTAVLLMDGQVFTFGSFSKGQLG 986
Score = 126 (49.4 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 30/104 (28%), Positives = 53/104 (50%)
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP-PEAVI 290
V+V+CG +H+V + G VYT+G+G +G+LGH + P V LP P +
Sbjct: 905 VQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQA------LPGPSTQV 958
Query: 291 SAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLR 334
+A S +++ GQ++ +G +P++D+ WN +
Sbjct: 959 TACSNHTAVLLMDGQVFTFGSFSKG----QLGRPILDIPYWNAK 998
Score = 88 (36.0 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 23/98 (23%), Positives = 46/98 (46%)
Query: 47 PTRLRPLVGVDIRFVA-AGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
P + + ++ ++ + V C + + +G Y +G+ D I D ++VS
Sbjct: 588 PYKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMFGK---------DAIYSDSSSLVS 638
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG 143
+L + + + G++HT V+ ++G FG N GQ G
Sbjct: 639 DLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 676
Score = 45 (20.9 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 268 DEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKL 312
D +P D+ R ++L PE + GS + T L++ G L
Sbjct: 1118 DARLPSATDMQSRCSILSPELALPTGS-RALTTRSHAALHILGCL 1161
>RGD|1310372 [details] [associations]
symbol:Als2 "amyotrophic lateral sclerosis 2 (juvenile)"
species:10116 "Rattus norvegicus" [GO:0001662 "behavioral fear
response" evidence=IEA;ISO] [GO:0001701 "in utero embryonic
development" evidence=IEP] [GO:0001726 "ruffle" evidence=IEA;ISO]
[GO:0001881 "receptor recycling" evidence=IEA;ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=ISO;ISS] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0005769 "early endosome" evidence=ISO;ISS]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=ISO;ISS] [GO:0006979 "response to oxidative stress"
evidence=IEA;ISO] [GO:0007032 "endosome organization" evidence=ISO]
[GO:0007409 "axonogenesis" evidence=IMP] [GO:0007528 "neuromuscular
junction development" evidence=IEA;ISO] [GO:0007626 "locomotory
behavior" evidence=IEA;ISO] [GO:0008104 "protein localization"
evidence=IEA;ISO] [GO:0008219 "cell death" evidence=IMP]
[GO:0014069 "postsynaptic density" evidence=IEA;ISO] [GO:0016020
"membrane" evidence=IDA] [GO:0016050 "vesicle organization"
evidence=IEA;ISO] [GO:0016197 "endosomal transport"
evidence=IEA;ISO] [GO:0016601 "Rac protein signal transduction"
evidence=IDA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=ISO;ISS] [GO:0017137 "Rab GTPase binding"
evidence=ISO;ISS] [GO:0030027 "lamellipodium" evidence=IEA;ISO]
[GO:0030424 "axon" evidence=IDA] [GO:0030425 "dendrite"
evidence=ISO;ISS;IDA] [GO:0030426 "growth cone" evidence=IDA]
[GO:0030676 "Rac guanyl-nucleotide exchange factor activity"
evidence=ISO;ISS] [GO:0031982 "vesicle" evidence=ISO;ISS]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IEA;ISO]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=ISO;ISS] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IEA;ISO] [GO:0042803 "protein
homodimerization activity" evidence=ISO;ISS] [GO:0043005 "neuron
projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0043197 "dendritic spine" evidence=ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] [GO:0043234 "protein complex" evidence=ISO;ISS]
[GO:0043539 "protein serine/threonine kinase activator activity"
evidence=ISO;ISS] [GO:0045860 "positive regulation of protein
kinase activity" evidence=ISO;ISS] [GO:0048812 "neuron projection
morphogenesis" evidence=ISO;ISS] [GO:0051036 "regulation of
endosome size" evidence=ISO;ISS] [GO:0071902 "positive regulation
of protein serine/threonine kinase activity" evidence=ISO]
InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621 PROSITE:PS00741
PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233 RGD:1310372
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 GO:GO:0005829
GO:GO:0005813 GO:GO:0043234 GO:GO:0042803 GO:GO:0014069
GO:GO:0008104 GO:GO:0006979 GO:GO:0016020 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0008219 GO:GO:0030424
GO:GO:0043025 GO:GO:0030425 GO:GO:0007528 GO:GO:0001701
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0016197
GO:GO:0030426 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0007409 GO:GO:0016601
eggNOG:COG4642 InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493
SMART:SM00698 PROSITE:PS51205 GeneTree:ENSGT00600000084242
CTD:57679 HOVERGEN:HBG037320 KO:K04575 OrthoDB:EOG4FTVZP
GO:GO:0005769 GO:GO:0031982 GO:GO:0017137 GO:GO:0017112
GO:GO:0030676 GO:GO:0001662 GO:GO:0032855 GO:GO:0001881
GO:GO:0051036 GO:GO:0032313 GO:GO:0016050 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
HOGENOM:HOG000033908 EMBL:AABR03068212 EMBL:BK005190
IPI:IPI00366955 RefSeq:NP_001013431.1 UniGene:Rn.219733
ProteinModelPortal:P0C5Y8 STRING:P0C5Y8 PhosphoSite:P0C5Y8
Ensembl:ENSRNOT00000035209 GeneID:363235 KEGG:rno:363235
UCSC:RGD:1310372 InParanoid:P0C5Y8 NextBio:682932
Genevestigator:P0C5Y8 Uniprot:P0C5Y8
Length = 1651
Score = 143 (55.4 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 46/152 (30%), Positives = 68/152 (44%)
Query: 34 GRRKGALDGNL--VSPTRLRPLVGVDIRFVA-AGCVSCHCVAV--DVEGRCYTWGRNERG 88
G R+ +L G L VSP LR V R V S A+ + +TWG+ + G
Sbjct: 472 GSRRLSLPGLLSQVSPRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKEG 531
Query: 89 QLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIR 148
QLGHGD + R +P V L ++ AG SH++ +T ++G N GQLG
Sbjct: 532 QLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGSHSLALTAKSQVYSWGSNTFGQLGHSEFP 591
Query: 149 NEIEPSPVRCLVSEVTATACGADFTVWLSSVE 180
+ S V + A G ++++L E
Sbjct: 592 TTVPRLSKVSSESGVWSVAAGHGYSLFLVDTE 623
Score = 103 (41.3 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 55/208 (26%), Positives = 81/208 (38%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
++P RL G + A G H V + +G Y++G +I P +
Sbjct: 30 LTPERLPGWGGKTVLQAALGVK--HGVLLTEDGEVYSFGTLP--WKSEAAEICPSSPLLE 85
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-- 162
S L + + G H+ VTE G +G N GQ + + EPSPV SE
Sbjct: 86 SALVGHHVVTVATGSFHSGAVTESGVVYMWGENAAGQCAVANQQYVSEPSPVSISDSETS 145
Query: 163 ------VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
+ ACG + T+ LS G QLG T TK
Sbjct: 146 PLLAVRILQLACGEEHTLALSISREIWAWGTGC----QLGLITTTFPVTK---------- 191
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAV 244
P+ + LAG +++VACG H++A+
Sbjct: 192 ---PQKVEHLAGRVVLQVACGAFHSLAL 216
Score = 102 (41.0 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 31/104 (29%), Positives = 52/104 (50%)
Query: 305 QLYMWGKLKNN--GDDWMYPK--PLMD--LSGWNLRCMDSGNMHHF-VGADSSCISWGHA 357
+++ WGK K G + P+ PL L G + +++G H + A S SWG
Sbjct: 521 EVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGSHSLALTAKSQVYSWGSN 580
Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
+G+LG+ + + +P+ + V SVA G+G+SL +VD
Sbjct: 581 TFGQLGHSEF---PTTVPRLSKVSSESGVWSVAAGHGYSLFLVD 621
Score = 88 (36.0 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 35/137 (25%), Positives = 57/137 (41%)
Query: 181 GASILNAGLP-QYGQL--GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
G ++L A L ++G L G + T + A P +AL G +V VA G
Sbjct: 40 GKTVLQAALGVKHGVLLTEDGEVYSFGTLPWKSEAAEICPSSPLLESALVGHHVVTVATG 99
Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV----ISAG 293
+ H+ AV G VY WG G+ Q+ P V + + P AV ++ G
Sbjct: 100 SFHSGAVTESGVVYMWGENAAGQCAVANQQYVSEPSPVSISD-SETSPLLAVRILQLACG 158
Query: 294 SVNSSCTAGGGQLYMWG 310
++ + +++ WG
Sbjct: 159 EEHTLALSISREIWAWG 175
Score = 75 (31.5 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 22/61 (36%), Positives = 29/61 (47%)
Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
V+TWG G G+LGH + P V V+ EA GS + + TA Q+Y W
Sbjct: 522 VWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEA---GGSHSLALTAKS-QVYSW 577
Query: 310 G 310
G
Sbjct: 578 G 578
Score = 73 (30.8 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 17/53 (32%), Positives = 27/53 (50%)
Query: 353 SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
+WG + G+LG+G + P V L+G VI + G HSL + ++ V
Sbjct: 524 TWGKGKEGQLGHGDVLPR--LQPLCVKCLDGKEVIHLEAGGSHSLALTAKSQV 574
>UNIPROTKB|F1Q1C6 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104312 OMA:MVTLAKS EMBL:AAEX03004216
EMBL:AAEX03004217 Ensembl:ENSCAFT00000018027 Uniprot:F1Q1C6
Length = 465
Score = 145 (56.1 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 86/333 (25%), Positives = 137/333 (41%)
Query: 106 ELSKYKIKKAGAGRSHTVVV--TEDGNSL-AFGWNKHGQLGSGSIRNE--------IEPS 154
EL + KI A G T++ T+D + G NK QLG + +EPS
Sbjct: 105 ELDQ-KISSAACGYGFTLLSSKTKDVTKVWGMGLNKDSQLGFHRSHKDKTRGYEYVLEPS 163
Query: 155 PV-----RCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSS 209
PV R + V +CG ++ L+ EG + + G YGQ G N ++
Sbjct: 164 PVPLPLDRPQETRVLQVSCGRAHSLILTDCEG--VFSMGNNAYGQCGR------NVVENE 215
Query: 210 VKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGR--LGHREQK 267
+ Y + + G+ +V+V CG +H++ + KG VY+ G+G G+ LGH +
Sbjct: 216 I---YSESHKVNRMQDFDGQ-VVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYDIT 271
Query: 268 DEWVPRRV--DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG-----KLKNNGDDWM 320
VP ++ D+ N V V + G + +A GG L+ WG +L + D
Sbjct: 272 S--VPTKLGGDLAGVNVV----QVATYGDCCLAVSAEGG-LFGWGNSEYLQLASVTDSTQ 324
Query: 321 YPKP-LMDLSGWNL--RCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
P + SG + G + + WG YG LG GP +A P+
Sbjct: 325 VNVPRCLPFSGVGKVKQAACGGTGCAVLNGEGHVFVWG---YGILGKGP-NLVETAFPEV 380
Query: 378 VD-----ILE---GMHVISVACGYGHSLVIVDR 402
+ + E G+HV + CG H + +
Sbjct: 381 IPPTLFGLTEFNPGVHVSHIWCGLSHFAALTSK 413
Score = 144 (55.7 bits), Expect = 6.5e-07, P = 6.5e-07
Identities = 92/399 (23%), Positives = 157/399 (39%)
Query: 35 RRKGALDGNLVSPTRLRPLVGVDIRFVAAGC-VSCHCVAVDVEGRCYTWGR--NERGQLG 91
RR G+ + P R + +D + +A C ++ + WG N+ QLG
Sbjct: 87 RRAGSRPPRRIQPVPYR--LELDQKISSAACGYGFTLLSSKTKDVTKVWGMGLNKDSQLG 144
Query: 92 ----HGDKIQRDR--------PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
H DK + P + + ++ + GR+H++++T+ + G N +
Sbjct: 145 FHRSHKDKTRGYEYVLEPSPVPLPLDRPQETRVLQVSCGRAHSLILTDCEGVFSMGNNAY 204
Query: 140 GQLGSGSIRNEI--EPSPVRCLVS---EVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
GQ G + NEI E V + +V CG D +++L+ +G + + G GQ
Sbjct: 205 GQCGRNVVENEIYSESHKVNRMQDFDGQVVQVVCGQDHSLFLTD-KG-EVYSCGWGADGQ 262
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
G G Y+ KL + LAG +V+VA + +AV ++G ++ WG
Sbjct: 263 TGLG---HYDITSVPTKLGGD----------LAGVNVVQVATYGDCCLAVSAEGGLFGWG 309
Query: 255 FGGYGRLGHREQKDEW-VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-L 312
Y +L + VPR + V +A + G + G G +++WG +
Sbjct: 310 NSEYLQLASVTDSTQVNVPRCLPFSGVGKV--KQA--ACGGTGCAVLNGEGHVFVWGYGI 365
Query: 313 KNNGDDWM-------YPKPLMDLSGWNLRCMDSG---NMHHFVGADSS--CISWGHAQYG 360
G + + P L L+ +N S + HF S WG G
Sbjct: 366 LGKGPNLVETAFPEVIPPTLFGLTEFNPGVHVSHIWCGLSHFAALTSKGELFVWGKNIRG 425
Query: 361 ELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
LG G + P +V + G + VACG H + +
Sbjct: 426 CLGIGRL--EDQYFPWRVT-MPG-EPVDVACGVDHMVTL 460
Score = 135 (52.6 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 63/258 (24%), Positives = 104/258 (40%)
Query: 26 GSTCWDAVGRRKGALDGNLVSPT-RLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT--W 82
G+ + GR ++ + S + ++ + D + V C H + + +G Y+ W
Sbjct: 200 GNNAYGQCGRN--VVENEIYSESHKVNRMQDFDGQVVQVVCGQDHSLFLTDKGEVYSCGW 257
Query: 83 GRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQL 142
G + + LGH D I + +L+ + + + V+ +G FGW L
Sbjct: 258 GADGQTGLGHYD-ITSVPTKLGGDLAGVNVVQVATYGDCCLAVSAEGG--LFGWGNSEYL 314
Query: 143 GSGSIRNEIEPSPVRCL----VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
S+ + + + RCL V +V ACG L+ EG + G YG LG G
Sbjct: 315 QLASVTDSTQVNVPRCLPFSGVGKVKQAACGGTGCAVLNG-EG-HVFVWG---YGILGKG 369
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAAL-AGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
N T V P + G + + CG +H A+ SKG ++ WG
Sbjct: 370 P-NLVETAFPEV-----IPPTLFGLTEFNPGVHVSHIWCGLSHFAALTSKGELFVWGKNI 423
Query: 258 YGRLGHREQKDEWVPRRV 275
G LG +D++ P RV
Sbjct: 424 RGCLGIGRLEDQYFPWRV 441
>FB|FBgn0000247 [details] [associations]
symbol:ca "claret" species:7227 "Drosophila melanogaster"
[GO:0006727 "ommochrome biosynthetic process" evidence=IMP]
[GO:0006856 "eye pigment precursor transport" evidence=TAS]
[GO:0017137 "Rab GTPase binding" evidence=IPI] [GO:0005622
"intracellular" evidence=IDA] [GO:0008057 "eye pigment granule
organization" evidence=IMP] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IPI] [GO:0017112 "Rab guanyl-nucleotide
exchange factor activity" evidence=IPI] [GO:0060967 "negative
regulation of gene silencing by RNA" evidence=IMP]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE014297 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PROSITE:PS50012 GO:GO:0008057
GO:GO:0060967 GO:GO:0006727 GO:GO:0006856
GeneTree:ENSGT00700000104208 FlyBase:FBgn0000247 EMBL:BT057978
RefSeq:NP_733309.3 UniGene:Dm.6851 SMR:Q9VAG5 MINT:MINT-1644098
STRING:Q9VAG5 EnsemblMetazoa:FBtr0085484 GeneID:43518
KEGG:dme:Dmel_CG31037 UCSC:CG31037-RA CTD:43518 InParanoid:Q9VAG5
OMA:DNTLHIV GenomeRNAi:43518 NextBio:834351 Uniprot:Q9VAG5
Length = 1961
Score = 141 (54.7 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 64/259 (24%), Positives = 112/259 (43%)
Query: 56 VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD-RPTIVSELSKYKIKK 114
++++ A C H + + G Y+ G N QLG G +Q +P +V+ L I
Sbjct: 1171 LNLQVHAIKCGRQHTLILTNNG-LYSLGNNNLCQLGIGRHMQMALQPMLVTALDGMNITM 1229
Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL----VSEV------T 164
AG+ H V DG +GW +GQLG GS N P V + ++ T
Sbjct: 1230 LEAGQYHNAAVA-DGKLYMWGWGIYGQLGQGSCENIATPQLVSFFKFKKILQISLGHAHT 1288
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
CGA + ++ G + G +GQLG G + +TK +++ + E
Sbjct: 1289 LVLCGAPNSHMEANHCGNELFVFGSNHFGQLGTGNSDHGDTK-TNLPVRLEVGD-----C 1342
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYG-RLGHREQKDEWVPRRVDVFQRNNV 283
+L ++ TN +AVD + ++TWG RL ++ ++ ++++ Q+ +
Sbjct: 1343 SLR---LIHTKFFTN--LAVDEQDRLFTWGSSPQALRLANQIKRRANAKQKMEENQQREL 1397
Query: 284 LPP--EAVISAGSVNSSCT 300
L EA + + S+ T
Sbjct: 1398 LSKQLEATLLPAPIPSTST 1416
Score = 121 (47.7 bits), Expect = 9.6e-05, Sum P(2) = 9.6e-05
Identities = 52/176 (29%), Positives = 74/176 (42%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
+ P + L G++I + AG H AV +G+ Y WG GQLG G P +V
Sbjct: 1214 LQPMLVTALDGMNITMLEAG--QYHNAAV-ADGKLYMWGWGIYGQLGQGSCENIATPQLV 1270
Query: 105 SELSKYKIKKAGAGRSHTVVV----------TEDGNSL-AFGWNKHGQLGSG-SIRNEIE 152
S KI + G +HT+V+ GN L FG N GQLG+G S + +
Sbjct: 1271 SFFKFKKILQISLGHAHTLVLCGAPNSHMEANHCGNELFVFGSNHFGQLGTGNSDHGDTK 1330
Query: 153 PS-PVRCLVSEVTATACGADFTVWLSSVEGASILNAGL-PQYGQLGHGTDNEYNTK 206
+ PVR V + + F L+ E + G PQ +L + N K
Sbjct: 1331 TNLPVRLEVGDCSLRLIHTKFFTNLAVDEQDRLFTWGSSPQALRLANQIKRRANAK 1386
Score = 112 (44.5 bits), Expect = 0.00089, Sum P(2) = 0.00089
Identities = 56/234 (23%), Positives = 95/234 (40%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDK-IQRDRPT-------IVSELSKYKI 112
++AGC C CV V+G Y WG + K + P ++S+L+ ++
Sbjct: 1120 ISAGCAYCACV---VDGTAYFWGSSGIPSYYSAQKSTEPPEPAHAVKSLDLLSQLN-LQV 1175
Query: 113 KKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSPVRCLVS-EVTATACGA 170
GR HT+++T +G + G N QLG G ++ ++P V L +T G
Sbjct: 1176 HAIKCGRQHTLILTNNG-LYSLGNNNLCQLGIGRHMQMALQPMLVTALDGMNITMLEAGQ 1234
Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
++V + G YGQLG G+ T ++ + + G
Sbjct: 1235 YHN---AAVADGKLYMWGWGIYGQLGQGSCENIATPQLVSFFKFK-----KILQISLGHA 1286
Query: 231 IVKVACGT--NHTVAVDSKGYVYTWGFGGYGRLG-----HREQKDEWVPRRVDV 277
V CG +H A ++ +G +G+LG H + K +P R++V
Sbjct: 1287 HTLVLCGAPNSHMEANHCGNELFVFGSNHFGQLGTGNSDHGDTKTN-LPVRLEV 1339
Score = 60 (26.2 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 18/64 (28%), Positives = 29/64 (45%)
Query: 338 SGNMHHFVGADSSCI--SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
S + HF SSC +WG +LG +++ P +D +E + V CG
Sbjct: 1507 SSGLFHFCLISSSCTLYTWGKNLEHQLGTEDKDRRAVLKPSPIDSIE--RPMYVDCGSDF 1564
Query: 396 SLVI 399
+LV+
Sbjct: 1565 TLVM 1568
Score = 57 (25.1 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV---PRRVDVFQR 280
+AG I++++ G H + S +YTWG +LG E KD P +D +R
Sbjct: 1499 VAGR-ILQISSGLFHFCLISSSCTLYTWGKNLEHQLG-TEDKDRRAVLKPSPIDSIER 1554
Score = 41 (19.5 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 295 VNSSCTAGGGQLYMWGK 311
++SSCT LY WGK
Sbjct: 1516 ISSSCT-----LYTWGK 1527
>FB|FBgn0030600 [details] [associations]
symbol:hiw "highwire" species:7227 "Drosophila melanogaster"
[GO:0008582 "regulation of synaptic growth at neuromuscular
junction" evidence=IMP;TAS] [GO:0016023 "cytoplasmic
membrane-bounded vesicle" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0007628 "adult walking behavior"
evidence=NAS] [GO:0040011 "locomotion" evidence=NAS] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0030514 "negative regulation
of BMP signaling pathway" evidence=IGI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0045886 "negative regulation of synaptic
growth at neuromuscular junction" evidence=IMP] [GO:0030509 "BMP
signaling pathway" evidence=IPI] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0006914 "autophagy" evidence=IDA]
[GO:0050808 "synapse organization" evidence=IDA] InterPro:IPR001841
InterPro:IPR027047 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415 Prosite:PS00518
GO:GO:0005886 GO:GO:0005634 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0046872 EMBL:AE014298 GO:GO:0008270 GO:GO:0006914
GO:GO:0040011 GO:GO:0050808 GO:GO:0006351 GO:GO:0016023
GO:GO:0045886 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0030509 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
GO:GO:0007628 eggNOG:COG5184 GO:GO:0030514 InterPro:IPR012983
Pfam:PF08005 InterPro:IPR017868 PROSITE:PS50194 EMBL:AF262977
EMBL:AY113376 RefSeq:NP_511159.3 UniGene:Dm.3259
ProteinModelPortal:Q9NB71 SMR:Q9NB71 IntAct:Q9NB71 STRING:Q9NB71
EnsemblMetazoa:FBtr0073970 GeneID:32429 KEGG:dme:Dmel_CG32592
UCSC:CG32592-RA CTD:32429 FlyBase:FBgn0030600
GeneTree:ENSGT00390000011403 InParanoid:Q9NB71 KO:K10693
OMA:DAQCQEY OrthoDB:EOG4ZPC91 PhylomeDB:Q9NB71 ChiTaRS:hiw
GenomeRNAi:32429 NextBio:778423 Bgee:Q9NB71 GermOnline:CG32592
PANTHER:PTHR12846 Uniprot:Q9NB71
Length = 5233
Score = 124 (48.7 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 37/107 (34%), Positives = 55/107 (51%)
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
P ++ S + + G HTVV+T G FG N++GQLGSG ++ PVR V
Sbjct: 957 PQLLQLTSSSPVVQVACGLHHTVVLTLAGEVYTFGSNQYGQLGSGDLQPV--SGPVRVQV 1014
Query: 161 -SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
++ A G++ TV L+S +G + G Q GQLG ++Y K
Sbjct: 1015 PGAISQVAAGSNHTVLLTS-KGM-VYTFGNYQKGQLGR-LPSDYGLK 1058
Score = 113 (44.8 bits), Expect = 6.7e-07, Sum P(2) = 6.7e-07
Identities = 30/93 (32%), Positives = 48/93 (51%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P+ + + +V+VACG +HTV + G VYT+G YG+LG + + P RV V
Sbjct: 957 PQLLQLTSSSPVVQVACGLHHTVVLTLAGEVYTFGSNQYGQLGSGDLQPVSGPVRVQV-- 1014
Query: 280 RNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWG 310
P A+ ++AGS ++ G +Y +G
Sbjct: 1015 ------PGAISQVAAGSNHTVLLTSKGMVYTFG 1041
Score = 98 (39.6 bits), Expect = 6.7e-07, Sum P(2) = 6.7e-07
Identities = 27/78 (34%), Positives = 36/78 (46%)
Query: 94 DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
D D VSEL + + K G++H V + G +FG N GQ G I N+++P
Sbjct: 734 DTAHCDAMGFVSELLEQHVTKVALGKAHCVALNAKGQLFSFGLNNKGQCGR--IFNKLQP 791
Query: 154 -SPVRCLVSEVTATACGA 170
V S TA AC A
Sbjct: 792 VKDVPPFASSSTAAACFA 809
Score = 87 (35.7 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 28/75 (37%), Positives = 35/75 (46%)
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G QYGQLG G + QP + I +VA G+NHTV + SK
Sbjct: 991 GSNQYGQLGSG----------------DLQPVSGPVRVQVPGAISQVAAGSNHTVLLTSK 1034
Query: 248 GYVYTWGFGGYGRLG 262
G VYT+G G+LG
Sbjct: 1035 GMVYTFGNYQKGQLG 1049
Score = 74 (31.1 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH-GDKIQ--RDRPTIVS 105
VA G HCVA++ +G+ +++G N +GQ G +K+Q +D P S
Sbjct: 755 VALG--KAHCVALNAKGQLFSFGLNNKGQCGRIFNKLQPVKDVPPFAS 800
Score = 71 (30.1 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 38/159 (23%), Positives = 66/159 (41%)
Query: 46 SPT-RLRPLV---GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD-- 99
+PT +L LV +I VA G H + V+ +G + G RG+ G K +R
Sbjct: 635 TPTLKLTELVISKAANIVHVAVGHDGIHALLVNDDGTVFFAGTARRGEDGDSSKNRRQPK 694
Query: 100 --RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
+P ++++ + + A + VT+ G + +G + G + +E
Sbjct: 695 AVKPKKMTKIDGHVVVHAACNNGTSAFVTKTGKLIMYGKDTAHCDAMGFVSELLE----- 749
Query: 158 CLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
VT A G V L++ +G + + GL GQ G
Sbjct: 750 ---QHVTKVALGKAHCVALNA-KG-QLFSFGLNNKGQCG 783
>MGI|MGI:1921268 [details] [associations]
symbol:Als2 "amyotrophic lateral sclerosis 2 (juvenile)"
species:10090 "Mus musculus" [GO:0001662 "behavioral fear response"
evidence=IMP] [GO:0001726 "ruffle" evidence=IDA] [GO:0001881
"receptor recycling" evidence=IMP] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005089 "Rho
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005097 "Rab GTPase activator activity" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0005769 "early endosome"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO] [GO:0006979 "response to
oxidative stress" evidence=IMP] [GO:0007032 "endosome organization"
evidence=ISO] [GO:0007041 "lysosomal transport" evidence=ISO]
[GO:0007409 "axonogenesis" evidence=ISO] [GO:0007528 "neuromuscular
junction development" evidence=IMP] [GO:0007626 "locomotory
behavior" evidence=IMP] [GO:0008104 "protein localization"
evidence=IMP] [GO:0008219 "cell death" evidence=ISO] [GO:0014069
"postsynaptic density" evidence=IDA] [GO:0016020 "membrane"
evidence=ISO] [GO:0016050 "vesicle organization" evidence=IDA]
[GO:0016197 "endosomal transport" evidence=IMP] [GO:0016601 "Rac
protein signal transduction" evidence=ISO] [GO:0017112 "Rab
guanyl-nucleotide exchange factor activity" evidence=ISO]
[GO:0017137 "Rab GTPase binding" evidence=ISO] [GO:0030027
"lamellipodium" evidence=IDA] [GO:0030424 "axon" evidence=ISO]
[GO:0030425 "dendrite" evidence=ISO] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030675 "Rac GTPase activator activity"
evidence=ISO] [GO:0030676 "Rac guanyl-nucleotide exchange factor
activity" evidence=ISO] [GO:0031982 "vesicle" evidence=ISO]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IDA]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=ISO] [GO:0035023 "regulation of Rho protein signal
transduction" evidence=IEA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IMP] [GO:0042802 "identical protein
binding" evidence=ISO] [GO:0042803 "protein homodimerization
activity" evidence=ISO] [GO:0043005 "neuron projection"
evidence=ISO] [GO:0043025 "neuronal cell body" evidence=ISO]
[GO:0043197 "dendritic spine" evidence=IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0043539 "protein
serine/threonine kinase activator activity" evidence=ISO]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=ISO] [GO:0048365 "Rac GTPase binding" evidence=ISO]
[GO:0048812 "neuron projection morphogenesis" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=ISO] [GO:0071902
"positive regulation of protein serine/threonine kinase activity"
evidence=ISO] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS00741 PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233
MGI:MGI:1921268 INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204
GO:GO:0005829 GO:GO:0043234 GO:GO:0042803 GO:GO:0014069
GO:GO:0008104 GO:GO:0006979 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812 GO:GO:0007626
GO:GO:0035249 GO:GO:0043539 GO:GO:0030027 GO:GO:0016197
GO:GO:0030426 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:CH466548 GO:GO:0001726
eggNOG:COG4642 InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493
SMART:SM00698 PROSITE:PS51205 GeneTree:ENSGT00600000084242
CTD:57679 HOVERGEN:HBG037320 KO:K04575 OMA:AKPAIDF
OrthoDB:EOG4FTVZP ChiTaRS:ALS2 GO:GO:0005769 GO:GO:0031982
GO:GO:0017137 GO:GO:0017112 GO:GO:0030676 GO:GO:0001662
GO:GO:0032855 GO:GO:0001881 GO:GO:0051036 GO:GO:0032313
GO:GO:0016050 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 EMBL:AB053307 EMBL:AC153652 EMBL:BC031479
EMBL:BC046828 EMBL:AK014320 IPI:IPI00170364 IPI:IPI00309844
RefSeq:NP_001153420.2 RefSeq:NP_082993.4 RefSeq:NP_666221.1
UniGene:Mm.272078 STRING:Q920R0 PhosphoSite:Q920R0 PaxDb:Q920R0
PRIDE:Q920R0 Ensembl:ENSMUST00000027178 Ensembl:ENSMUST00000163058
GeneID:74018 KEGG:mmu:74018 UCSC:uc007bdm.2 UCSC:uc007bdn.2
HOGENOM:HOG000033908 InParanoid:Q920R0 NextBio:339546
Genevestigator:Q920R0 GermOnline:ENSMUSG00000026024 Uniprot:Q920R0
Length = 1651
Score = 148 (57.2 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 46/152 (30%), Positives = 69/152 (45%)
Query: 34 GRRKGALDGNL--VSPTRLRPLVGVDIRFVA-AGCVSCHCVAV--DVEGRCYTWGRNERG 88
G R+ +L G L VSP LR V R V S A+ + +TWG+ + G
Sbjct: 472 GSRRLSLPGLLSQVSPRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKEG 531
Query: 89 QLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIR 148
QLGHGD + R +P V L ++ AG SH++ +T ++G N GQLG
Sbjct: 532 QLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGSHSLALTAKSQVYSWGSNTFGQLGHSEFP 591
Query: 149 NEIEPSPVRCLVSEVTATACGADFTVWLSSVE 180
+ + V + A G D++++L E
Sbjct: 592 TTVPRLSKVSSENGVWSVAAGQDYSLFLVDTE 623
Score = 101 (40.6 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 55/208 (26%), Positives = 82/208 (39%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
++P RL G + A G H V + +G Y++G +I P +
Sbjct: 30 LTPERLPGWGGKTVLQAALGVR--HGVLLTEDGEVYSFGTLP--WKSESAEICPSSPLLE 85
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT 164
S L + + G H+ VTE G +G N GQ + + EPSPV SE +
Sbjct: 86 SALVGHHVITVATGSFHSGAVTESGVVYMWGENAAGQCAVANQQYVPEPSPVSISDSETS 145
Query: 165 AT--------ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
+ ACG + T+ LS G QLG T TK
Sbjct: 146 PSLAVRILQLACGEEHTLALSLSREIWAWGTGC----QLGLITTTFPVTK---------- 191
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAV 244
P+ + LAG +++VACG H++A+
Sbjct: 192 ---PQKVEHLAGRVVLQVACGAFHSLAL 216
Score = 91 (37.1 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 30/104 (28%), Positives = 50/104 (48%)
Query: 305 QLYMWGKLKNN--GDDWMYPK--PLMD--LSGWNLRCMDSGNMHHF-VGADSSCISWGHA 357
+++ WGK K G + P+ PL L G + +++G H + A S SWG
Sbjct: 521 EVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGSHSLALTAKSQVYSWGSN 580
Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
+G+LG+ + + +P+ + V SVA G +SL +VD
Sbjct: 581 TFGQLGHSEF---PTTVPRLSKVSSENGVWSVAAGQDYSLFLVD 621
Score = 89 (36.4 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 35/138 (25%), Positives = 58/138 (42%)
Query: 181 GASILNAGLP-QYGQL--GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
G ++L A L ++G L G + T + A P +AL G ++ VA G
Sbjct: 40 GKTVLQAALGVRHGVLLTEDGEVYSFGTLPWKSESAEICPSSPLLESALVGHHVITVATG 99
Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV-FQRNNVLPPEAV----ISA 292
+ H+ AV G VY WG G+ Q ++VP V + P AV ++
Sbjct: 100 SFHSGAVTESGVVYMWGENAAGQCAVANQ--QYVPEPSPVSISDSETSPSLAVRILQLAC 157
Query: 293 GSVNSSCTAGGGQLYMWG 310
G ++ + +++ WG
Sbjct: 158 GEEHTLALSLSREIWAWG 175
Score = 87 (35.7 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 41/151 (27%), Positives = 70/151 (46%)
Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS-PVRCLVSEVTATACGA 170
+ +A G H V++TEDG +FG L S EI PS P+ L S +
Sbjct: 43 VLQAALGVRHGVLLTEDGEVYSFG-----TLPWKSESAEICPSSPL--LESALVGHHV-- 93
Query: 171 DFTVWLSSVEGASILNAGLP-QYGQLGHG----TDNEYNTKDSSVKLAYEAQPRPRAIAA 225
TV S ++ +G+ +G+ G + +Y + S V ++ +++ P +
Sbjct: 94 -ITVATGSFHSGAVTESGVVYMWGENAAGQCAVANQQYVPEPSPVSIS-DSETSP----S 147
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
LA I+++ACG HT+A+ ++ WG G
Sbjct: 148 LAVR-ILQLACGEEHTLALSLSREIWAWGTG 177
Score = 85 (35.0 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 23/92 (25%), Positives = 40/92 (43%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P + G+T+++ A G H V + G VY+ +G L + + E P + +
Sbjct: 32 PERLPGWGGKTVLQAALGVRHGVLLTEDGEVYS-----FGTLPWKSESAEICPSS-PLLE 85
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
V ++ GS +S G +YMWG+
Sbjct: 86 SALVGHHVITVATGSFHSGAVTESGVVYMWGE 117
Score = 75 (31.5 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 22/61 (36%), Positives = 29/61 (47%)
Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
V+TWG G G+LGH + P V V+ EA GS + + TA Q+Y W
Sbjct: 522 VWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEA---GGSHSLALTAKS-QVYSW 577
Query: 310 G 310
G
Sbjct: 578 G 578
Score = 73 (30.8 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 17/53 (32%), Positives = 27/53 (50%)
Query: 353 SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
+WG + G+LG+G + P V L+G VI + G HSL + ++ V
Sbjct: 524 TWGKGKEGQLGHGDVLPR--LQPLCVKCLDGKEVIHLEAGGSHSLALTAKSQV 574
>GENEDB_PFALCIPARUM|MAL7P1.38 [details] [associations]
symbol:MAL7P1.38 "regulator of chromosome
condensation protein, putative" species:5833 "Plasmodium
falciparum" [GO:0005634 "nucleus" evidence=ISS] [GO:0003682
"chromatin binding" evidence=ISS] [GO:0030261 "chromosome
condensation" evidence=ISS] [GO:0007049 "cell cycle" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0003682
GO:GO:0007049 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0030261 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS50012
EMBL:AL844506 RefSeq:XP_002808773.1 ProteinModelPortal:C0H4M6
EnsemblProtists:MAL7P1.38:mRNA GeneID:2655211 KEGG:pfa:MAL7P1.38
EuPathDB:PlasmoDB:PF3D7_0711500 HOGENOM:HOG000283921
ProtClustDB:CLSZ2431811 Uniprot:C0H4M6
Length = 687
Score = 103 (41.3 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 36/116 (31%), Positives = 57/116 (49%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH-----GDKIQRD 99
V+PT + P + DI V G S H + + + Y++G N+ G LG G K
Sbjct: 29 VNPTAI-PNLPNDIDEVICG--SMHTIIKTTDDKLYSFGCNDMGVLGRKTYSSGIKDLEH 85
Query: 100 RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS-LAFGWNKH-GQLGSGSI--RNEI 151
PT+++ KIKK G +HT ++ E+G + G+ + G LG S +NE+
Sbjct: 86 SPTLINFTFPSKIKKITCGDNHTAILLENGKVYITGGFRDYCGVLGLPSFGEKNEL 141
Score = 87 (35.7 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 36/151 (23%), Positives = 63/151 (41%)
Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALA 227
CG + T ++ + G YG G ++KD+ +K +E I L+
Sbjct: 269 CGGNNT-YVQLENSLDVYGIGRNAYGSCG------VSSKDNIIK-KFEK------IQELS 314
Query: 228 GETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE 287
+ I ++ G + TV + + +Y WG LG D + P +D F++NN
Sbjct: 315 QKKINQLCGGQSFTVCLLNNNDLYIWG--NREILGMEYDDDAYSPLELDFFKKNNYTVKN 372
Query: 288 AVISAGSVNSSCTAGGGQLYMWGKLKNNGDD 318
I+ G+ + G+L+ WG N D+
Sbjct: 373 --ITCGTDHCLVLTDNGKLFGWGTGGNEFDE 401
>UNIPROTKB|C0H4M6 [details] [associations]
symbol:MAL7P1.38 "Regulator of chromosome condensation,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0003682
"chromatin binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0007049 "cell cycle" evidence=ISS] [GO:0030261
"chromosome condensation" evidence=ISS] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0003682 GO:GO:0007049
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0030261
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS50012 EMBL:AL844506
RefSeq:XP_002808773.1 ProteinModelPortal:C0H4M6
EnsemblProtists:MAL7P1.38:mRNA GeneID:2655211 KEGG:pfa:MAL7P1.38
EuPathDB:PlasmoDB:PF3D7_0711500 HOGENOM:HOG000283921
ProtClustDB:CLSZ2431811 Uniprot:C0H4M6
Length = 687
Score = 103 (41.3 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 36/116 (31%), Positives = 57/116 (49%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH-----GDKIQRD 99
V+PT + P + DI V G S H + + + Y++G N+ G LG G K
Sbjct: 29 VNPTAI-PNLPNDIDEVICG--SMHTIIKTTDDKLYSFGCNDMGVLGRKTYSSGIKDLEH 85
Query: 100 RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS-LAFGWNKH-GQLGSGSI--RNEI 151
PT+++ KIKK G +HT ++ E+G + G+ + G LG S +NE+
Sbjct: 86 SPTLINFTFPSKIKKITCGDNHTAILLENGKVYITGGFRDYCGVLGLPSFGEKNEL 141
Score = 87 (35.7 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 36/151 (23%), Positives = 63/151 (41%)
Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALA 227
CG + T ++ + G YG G ++KD+ +K +E I L+
Sbjct: 269 CGGNNT-YVQLENSLDVYGIGRNAYGSCG------VSSKDNIIK-KFEK------IQELS 314
Query: 228 GETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE 287
+ I ++ G + TV + + +Y WG LG D + P +D F++NN
Sbjct: 315 QKKINQLCGGQSFTVCLLNNNDLYIWG--NREILGMEYDDDAYSPLELDFFKKNNYTVKN 372
Query: 288 AVISAGSVNSSCTAGGGQLYMWGKLKNNGDD 318
I+ G+ + G+L+ WG N D+
Sbjct: 373 --ITCGTDHCLVLTDNGKLFGWGTGGNEFDE 401
>UNIPROTKB|E9PMV6 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058
EMBL:AC124078 IPI:IPI00976302 ProteinModelPortal:E9PMV6 SMR:E9PMV6
Ensembl:ENST00000529728 ArrayExpress:E9PMV6 Bgee:E9PMV6
Uniprot:E9PMV6
Length = 229
Score = 132 (51.5 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 67/238 (28%), Positives = 95/238 (39%)
Query: 77 GRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
G+ + G N GQLG HG + + P + EL K K+ AG H V T G + F
Sbjct: 6 GQVLSCGSNSFGQLGVPHGPR-RCVVPQAI-ELHKEKVVCIAAGLRHAVAATASG--IVF 61
Query: 135 GWNKHGQLGSGSIRNEIEPSPVRCLVSE---VTATACGADFTVWLSSVEGASILNAG-LP 190
W G G + P+ E VT V S AS+ +AG +
Sbjct: 62 QWGT-GLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVY 120
Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQ--PRPRAIAA--LAGETIVKVACGTNHTVAVDS 246
+G HG +LA EA P P+ I A E + + G H VA
Sbjct: 121 VWGSNKHG------------QLANEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTE 168
Query: 247 KGYVYTWGFGGYGRLGHR-EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
G ++TWG YG+LG + E + W + D F + PP ++ S+ + T G
Sbjct: 169 TGKMFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCS-RPPNSMPSSPHCLTGATEVG 225
Score = 126 (49.4 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 52/218 (23%), Positives = 89/218 (40%)
Query: 124 VVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGA 182
++TE+G L+ G N GQLG R + P + +V A G V A
Sbjct: 1 MLTENGQVLSCGSNSFGQLGVPHGPRRCVVPQAIELHKEKVVCIAAGLRHAV-------A 53
Query: 183 SILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTV 242
+ + + Q+G G + ++ L + A+ P + L + V G++H+
Sbjct: 54 ATASGIVFQWGT-GLASCGRRLCPGQTLPLFFTAK-EPSRVTGLENSKAMCVLAGSDHSA 111
Query: 243 AVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV--FQRNNVLPPEAVISAGSVNSSCT 300
++ G VY WG +G+L + E VP++++ FQ V I +G +
Sbjct: 112 SLTDAGEVYVWGSNKHGQLAN-EAAFLPVPQKIEAHCFQNEKV----TAIWSGWTHLVAQ 166
Query: 301 AGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDS 338
G+++ WG+ D + L GW L DS
Sbjct: 167 TETGKMFTWGR----ADYGQLGRKLETYEGWKLEKQDS 200
Score = 117 (46.2 bits), Expect = 0.00014, P = 0.00014
Identities = 43/156 (27%), Positives = 67/156 (42%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P+AI L E +V +A G H VA + G V+ WG G G R + +P +
Sbjct: 31 PQAIE-LHKEKVVCIAAGLRHAVAATASGIVFQWGTG-LASCGRRLCPGQTLPLFFTAKE 88
Query: 280 RNNVLPPE---AV-ISAGSVNSSCTAGGGQLYMWGKLKNN---GDDWMYPKPLMD----L 328
+ V E A+ + AGS +S+ G++Y+WG K+ + P P
Sbjct: 89 PSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANEAAFLPVPQKIEAHCF 148
Query: 329 SGWNLRCMDSGNMHHFVGADSS-CISWGHAQYGELG 363
+ + SG H ++ +WG A YG+LG
Sbjct: 149 QNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLG 184
Score = 115 (45.5 bits), Expect = 0.00025, P = 0.00025
Identities = 56/224 (25%), Positives = 87/224 (38%)
Query: 22 LLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
+L CGS + +G G V P + L + +AAG H VA G +
Sbjct: 8 VLSCGSNSFGQLGVPHGPR--RCVVPQAIE-LHKEKVVCIAAGLR--HAVAATASGIVFQ 62
Query: 82 WGRNERG---QLGHGDKIQ----RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
WG +L G + P+ V+ L K AG H+ +T+ G +
Sbjct: 63 WGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVW 122
Query: 135 GWNKHGQLGSGSIRNEIEPSPVR--CLVSEVTATACGADFTVWLSSVEGASILNAGLPQY 192
G NKHGQL + + + P + C +E TA + +T ++ E + G Y
Sbjct: 123 GSNKHGQLANEAAFLPV-PQKIEAHCFQNE-KVTAIWSGWTHLVAQTETGKMFTWGRADY 180
Query: 193 GQLGHGTDN----EYNTKDSSVKLAYEAQPRPRAIAALAGETIV 232
GQLG + + +DS + + P + L G T V
Sbjct: 181 GQLGRKLETYEGWKLEKQDSFLPCSRPPNSMPSSPHCLTGATEV 224
>ASPGD|ASPL0000042168 [details] [associations]
symbol:AN2073 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408 EMBL:BN001307
Gene3D:1.25.40.20 InterPro:IPR020683 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 EMBL:AACD01000032 PRINTS:PR00633 PROSITE:PS50012
eggNOG:COG5184 OrthoDB:EOG42VCR5 RefSeq:XP_659677.1
ProteinModelPortal:Q5BBK7 EnsemblFungi:CADANIAT00008743
GeneID:2875213 KEGG:ani:AN2073.2 HOGENOM:HOG000182979 OMA:DRLSQIC
Uniprot:Q5BBK7
Length = 1680
Score = 145 (56.1 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 56/226 (24%), Positives = 96/226 (42%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D +L + + RPL I+ +A + + D E + G G+LG GD+ R
Sbjct: 411 DQDLPAFIKARPL---KIQTLAMSKLHTAILTDDPESNLFICGFGPGGRLGTGDESTRFS 467
Query: 101 PTIVSE--LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIR-NEIEPSPVR 157
+ L+ K+ G+ HT+ +TE G+ ++G NK GQLG G R N + PV+
Sbjct: 468 FVCIEGGGLANKKVASVALGQDHTLAITEHGDIFSWGSNKFGQLGYGLPRANNKDDVPVQ 527
Query: 158 CLVSEV-TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
++ S+V +GL +G+ + + DS + + E
Sbjct: 528 LSPRQIFNPFKKEVILGAAASAVHSVVYSTSGLYTFGK----NEGQLGLVDSDAR-SLEV 582
Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGY-VYTWGFGGYGRL 261
Q PR + A T ++ T+ A+ + + V+ + GY RL
Sbjct: 583 QTTPRRVGASLFSTPIQSVSATDQATAILLQNHEVWVFAHYGYSRL 628
>UNIPROTKB|F1MDF3 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051036 "regulation of endosome size" evidence=IEA]
[GO:0048812 "neuron projection morphogenesis" evidence=IEA]
[GO:0043539 "protein serine/threonine kinase activator activity"
evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=IEA] [GO:0032313 "regulation of Rab GTPase activity"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0030676 "Rac
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0017137 "Rab GTPase
binding" evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0016050 "vesicle organization" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0008104
"protein localization" evidence=IEA] [GO:0007626 "locomotory
behavior" evidence=IEA] [GO:0007528 "neuromuscular junction
development" evidence=IEA] [GO:0006979 "response to oxidative
stress" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005769 "early endosome"
evidence=IEA] [GO:0001881 "receptor recycling" evidence=IEA]
[GO:0001726 "ruffle" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0005543 "phospholipid binding"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
Pfam:PF02204 GO:GO:0005829 GO:GO:0005813 GO:GO:0043234
GO:GO:0014069 GO:GO:0008104 GO:GO:0006979 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0016197
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
GeneTree:ENSGT00600000084242 OMA:AKPAIDF GO:GO:0005769
GO:GO:0017112 GO:GO:0030676 GO:GO:0001662 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:DAAA02005594
EMBL:DAAA02005595 EMBL:DAAA02005596 IPI:IPI00905690
Ensembl:ENSBTAT00000060956 Uniprot:F1MDF3
Length = 1661
Score = 142 (55.0 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 48/154 (31%), Positives = 72/154 (46%)
Query: 34 GRRKGALDGNL--VSPTRLRPLVGVDIRFVA-AGCVSCHCVAV--DVEGRCYTWGRNERG 88
G R+ +L G L VSP LR V R V S A+ + +TWG+ + G
Sbjct: 482 GSRRLSLPGLLSQVSPRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKEG 541
Query: 89 QLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIR 148
QLGHGD + R +P V L ++ AG H++ +T ++G N GQLG
Sbjct: 542 QLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSNTFGQLGHSDFP 601
Query: 149 NEIEPSPVRCLVSE--VTATACGADFTVWLSSVE 180
+ P + + SE V + A G D++++L E
Sbjct: 602 TTV-PRLAK-VNSENGVWSVAAGQDYSLFLVDTE 633
Score = 105 (42.0 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 21/65 (32%), Positives = 35/65 (53%)
Query: 219 RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
+P + L G+ ++ + G H++A+ +K VY+WG +G+LGH + VPR V
Sbjct: 553 QPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSNTFGQLGHSDFPTT-VPRLAKVN 611
Query: 279 QRNNV 283
N V
Sbjct: 612 SENGV 616
Score = 92 (37.4 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 30/104 (28%), Positives = 50/104 (48%)
Query: 305 QLYMWGKLKNN--GDDWMYPK--PLMD--LSGWNLRCMDSGNMHHF-VGADSSCISWGHA 357
+++ WGK K G + P+ PL L G + +++G H + A S SWG
Sbjct: 531 EVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSN 590
Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
+G+LG+ + + +P+ + V SVA G +SL +VD
Sbjct: 591 TFGQLGHSDF---PTTVPRLAKVNSENGVWSVAAGQDYSLFLVD 631
Score = 90 (36.7 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 46/176 (26%), Positives = 71/176 (40%)
Query: 150 EIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLP-QYGQLGHGTDNEYNTKDS 208
E E S R LV A +C L G ++L+A L ++G L + D
Sbjct: 10 EAEGSKERGLVHVWQAGSCSVT-PERLPGWGGKTVLHAALGVKHGVL---LTEVFKPSDG 65
Query: 209 SV----KLAYEAQP------RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
V L + ++P P +AL G+ +V VA G+ HT AV G VY WG
Sbjct: 66 EVYSFGTLPWRSEPAETCPSNPILESALVGQYVVTVATGSFHTGAVTDSGVVYMWGENSA 125
Query: 259 GRLGHREQKDEWVPRRVDVFQRNNVLPPEAV----ISAGSVNSSCTAGGGQLYMWG 310
G+ Q P V + + P AV ++ G ++ + +++ WG
Sbjct: 126 GQCAVANQPYVPEPNPVSISD-SETSPLLAVRILQLACGEEHTLALSLSREIWAWG 180
Score = 88 (36.0 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 37/127 (29%), Positives = 51/127 (40%)
Query: 53 LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDK--IQRDRPTIVSE---- 106
LVG + VA G S H AV G Y WG N GQ ++ + P +S+
Sbjct: 93 LVGQYVVTVATG--SFHTGAVTDSGVVYMWGENSAGQCAVANQPYVPEPNPVSISDSETS 150
Query: 107 -LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEI-EPSPVRCLVSEVT 164
L +I + G HT+ ++ A W QLG + + +P V L V
Sbjct: 151 PLLAVRILQLACGEEHTLALSLSREIWA--WGTGCQLGLITTTFPVTKPQKVEHLAGRVV 208
Query: 165 A-TACGA 170
ACGA
Sbjct: 209 LQVACGA 215
>ZFIN|ZDB-GENE-070402-2 [details] [associations]
symbol:als2a "amyotrophic lateral sclerosis 2a
(juvenile)" species:7955 "Danio rerio" [GO:0035023 "regulation of
Rho protein signal transduction" evidence=IEA] [GO:0005089 "Rho
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0043025 "neuronal
cell body" evidence=ISS] [GO:0030425 "dendrite" evidence=ISS]
[GO:0005769 "early endosome" evidence=ISS] [GO:0016197 "endosomal
transport" evidence=ISS] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=ISS] [GO:0005813 "centrosome" evidence=ISS]
[GO:0014069 "postsynaptic density" evidence=ISS] [GO:0007528
"neuromuscular junction development" evidence=ISS] [GO:0030424
"axon" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043197 "dendritic spine" evidence=ISS] [GO:0007409
"axonogenesis" evidence=ISS] [GO:0016050 "vesicle organization"
evidence=ISS] [GO:0017137 "Rab GTPase binding" evidence=ISS]
[GO:0017112 "Rab guanyl-nucleotide exchange factor activity"
evidence=ISS] InterPro:IPR000219 Pfam:PF00621 PROSITE:PS50010
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 ZFIN:ZDB-GENE-070402-2
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622 GO:GO:0005089
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:BK005193
UniGene:Dr.102729 ProteinModelPortal:I7L9G3 Uniprot:I7L9G3
Length = 1590
Score = 136 (52.9 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 25/64 (39%), Positives = 39/64 (60%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
++WG+ GQLGHGD + R +P + LSK ++ K AG +H++ +T ++G K
Sbjct: 523 WSWGKGHEGQLGHGDYLPRLQPLCIKSLSKKEVVKITAGANHSLALTAQCQVYSWGSEKF 582
Query: 140 GQLG 143
GQLG
Sbjct: 583 GQLG 586
Score = 112 (44.5 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 60/211 (28%), Positives = 91/211 (43%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
VSP +L L+ + A G S H + + G+ Y++G ++ ++V
Sbjct: 23 VSPEKL--LLSRPVLHAALG--SLHGLLLIEGGQVYSFGEQP------WKPVEPPPASLV 72
Query: 105 SE--LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSPVRCLVS 161
E LS + AG H VTEDG L +G N +GQ G SG+ R P+PV +
Sbjct: 73 LESTLSGQHVISVSAGSYHCSAVTEDGLVLMWGENSYGQCGVSGTDRVP-SPTPVTVVDD 131
Query: 162 E--------VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
E V ACGA T+ LS+ +G QLG T N +
Sbjct: 132 ETHPPQLVRVLNVACGAQHTLALSNKHEVWAWGSGC----QLGLVT-NVFPVW------- 179
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAV 244
+P+ + L G +V++ACG H++A+
Sbjct: 180 -----KPQKVEHLVGRYVVQIACGAFHSLAL 205
Score = 93 (37.8 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 25/101 (24%), Positives = 47/101 (46%)
Query: 217 QPRPRAI---AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
+P P ++ + L+G+ ++ V+ G+ H AV G V WG YG+ G P
Sbjct: 65 EPPPASLVLESTLSGQHVISVSAGSYHCSAVTEDGLVLMWGENSYGQCGVSGTDRVPSPT 124
Query: 274 RVDVFQRNNVLPPEAV----ISAGSVNSSCTAGGGQLYMWG 310
V V + PP+ V ++ G+ ++ + +++ WG
Sbjct: 125 PVTVVD-DETHPPQLVRVLNVACGAQHTLALSNKHEVWAWG 164
Score = 83 (34.3 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 27/104 (25%), Positives = 47/104 (45%)
Query: 305 QLYMWGK----LKNNGD--DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHA 357
+++ WGK +GD + P + LS + + +G H + A SWG
Sbjct: 521 EVWSWGKGHEGQLGHGDYLPRLQPLCIKSLSKKEVVKITAGANHSLALTAQCQVYSWGSE 580
Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
++G+LG S +P + +G+ V VA G H+L++ D
Sbjct: 581 KFGQLGRM---NSPSTVPNLTTVSDGIRVWDVAAGQTHTLLLAD 621
Score = 79 (32.9 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 29/107 (27%), Positives = 47/107 (43%)
Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
V++WG G G+LGH + P + + V+ I+AG+ +S Q+Y W
Sbjct: 522 VWSWGKGHEGQLGHGDYLPRLQPLCIKSLSKKEVVK----ITAGANHSLALTAQCQVYSW 577
Query: 310 GKLKNNGDDWMY-PKPLMDLSGWN--LRCMD--SGNMHHFVGADSSC 351
G K M P + +L+ + +R D +G H + AD C
Sbjct: 578 GSEKFGQLGRMNSPSTVPNLTTVSDGIRVWDVAAGQTHTLLLADGDC 624
Score = 72 (30.4 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 16/53 (30%), Positives = 24/53 (45%)
Query: 353 SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
SWG G+LG+G Y + P + L V+ + G HSL + + V
Sbjct: 524 SWGKGHEGQLGHGDYLPR--LQPLCIKSLSKKEVVKITAGANHSLALTAQCQV 574
Score = 37 (18.1 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 287 EAVISAGSVNSSCTAGG 303
+ VIS G + SC GG
Sbjct: 437 DLVISNGCLFESCEEGG 453
>DICTYBASE|DDB_G0280093 [details] [associations]
symbol:gacGG "RhoGAP domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0007165 "signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0043547 "positive regulation of GTPase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005096
"GTPase activator activity" evidence=IEA] InterPro:IPR000198
InterPro:IPR008936 Pfam:PF00620 PROSITE:PS50238 SMART:SM00324
dictyBase:DDB_G0280093 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0007165 GO:GO:0005096 GO:GO:0043547
Gene3D:1.10.555.10 SUPFAM:SSF48350 GenomeReviews:CM000152_GR
EMBL:AAFI02000035 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 HSSP:Q07960 RefSeq:XP_641238.1
ProteinModelPortal:Q54VW7 EnsemblProtists:DDB0233849 GeneID:8622369
KEGG:ddi:DDB_G0280093 InParanoid:Q54VW7 OMA:INSIVEC Uniprot:Q54VW7
Length = 1203
Score = 140 (54.3 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 51/178 (28%), Positives = 78/178 (43%)
Query: 237 GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGS 294
G NH++A+ G +Y WG + +L + + + + + V+P + V IS G
Sbjct: 42 GYNHSLALTETGELYGWGDNRHHQLSSNKAITS-IDKPIKI----QVIPNQRVKSISCGG 96
Query: 295 VNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS----- 349
S+ G LY+WG L G P + L G + C+ G H V ADS
Sbjct: 97 NFSAAIMENGLLYVWGTLIEGGKCTESPTKVDLLKG--VTCVSIGINHCAVVADSPTTPE 154
Query: 350 --SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
S +WG + G+LG G + P++V + G ISV CG + IV+ V
Sbjct: 155 KRSVYTWGTNRKGQLGV--VGDSITNAPRRVTL--GSKAISVCCGEEFTAAIVEGNEV 208
Score = 111 (44.1 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 45/140 (32%), Positives = 64/140 (45%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVA---VDVEGRC-YTWGRNERGQLGH-GDKIQRDR 100
SPT++ L GV V+ G C VA E R YTWG N +GQLG GD I +
Sbjct: 123 SPTKVDLLKGVTC--VSIGINHCAVVADSPTTPEKRSVYTWGTNRKGQLGVVGDSIT-NA 179
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
P V+ SK I G T + E +G+NK Q+ S + +EI PV+ +
Sbjct: 180 PRRVTLGSK-AISVC-CGEEFTAAIVEGNEVFVWGYNKSRQICSNN-SDEIISIPVKPFL 236
Query: 161 S-EVTATACGADFTVWLSSV 179
++ +C ++ S V
Sbjct: 237 GRDIVELSCTKNYIAARSGV 256
Score = 96 (38.9 bits), Expect = 0.00097, Sum P(2) = 0.00097
Identities = 42/155 (27%), Positives = 66/155 (42%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR-DRPTIVS 105
PT PL+ +I F+ G H +A+ G Y WG N QL I D+P +
Sbjct: 27 PT-FNPLIP-NICFMDNGYN--HSLALTETGELYGWGDNRHHQLSSNKAITSIDKPIKIQ 82
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA 165
+ ++K G + + + E+G L + W G L G E P+ V L+ VT
Sbjct: 83 VIPNQRVKSISCGGNFSAAIMENG--LLYVW---GTLIEGGKCTE-SPTKVD-LLKGVTC 135
Query: 166 TACGADFTVWLS----SVEGASILNAGLPQYGQLG 196
+ G + ++ + E S+ G + GQLG
Sbjct: 136 VSIGINHCAVVADSPTTPEKRSVYTWGTNRKGQLG 170
Score = 72 (30.4 bits), Expect = 0.00097, Sum P(2) = 0.00097
Identities = 32/151 (21%), Positives = 61/151 (40%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
PR + G + V CG T A+ V+ WG+ ++ DE + V F
Sbjct: 180 PRRVTL--GSKAISVCCGEEFTAAIVEGNEVFVWGYNKSRQICSNNS-DEIISIPVKPFL 236
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWG---KLKNNGDDWM--YPKPLMDLSGWNLR 334
+++ +S + +G G + +WG ++ GDD +P + +S
Sbjct: 237 GRDIVE----LSCTKNYIAARSGVGNVCVWGSNEQVCRIGDDKFINFPNKIKQIS----- 287
Query: 335 CMDSGNMHHFVGADSSCI-SWGHAQYGELGY 364
+ H V ++ I SWG+++ +L +
Sbjct: 288 ---ASTSHILVLSEKGEIFSWGNSEDNQLSH 315
Score = 62 (26.9 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 9/34 (26%), Positives = 20/34 (58%)
Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHR 264
I +++ T+H + + KG +++WG +L H+
Sbjct: 283 IKQISASTSHILVLSEKGEIFSWGNSEDNQLSHK 316
>UNIPROTKB|F1SI31 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051036 "regulation of endosome size" evidence=IEA]
[GO:0048812 "neuron projection morphogenesis" evidence=IEA]
[GO:0043539 "protein serine/threonine kinase activator activity"
evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=IEA] [GO:0032313 "regulation of Rab GTPase activity"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0030676 "Rac
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0017137 "Rab GTPase
binding" evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0016050 "vesicle organization" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0008104
"protein localization" evidence=IEA] [GO:0007626 "locomotory
behavior" evidence=IEA] [GO:0007528 "neuromuscular junction
development" evidence=IEA] [GO:0006979 "response to oxidative
stress" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005769 "early endosome"
evidence=IEA] [GO:0001881 "receptor recycling" evidence=IEA]
[GO:0001726 "ruffle" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0005543 "phospholipid binding"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408
Pfam:PF00415 Pfam:PF02204 GO:GO:0005829 GO:GO:0005813 GO:GO:0043234
GO:GO:0014069 GO:GO:0008104 GO:GO:0006979 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0016197
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
GeneTree:ENSGT00600000084242 OMA:AKPAIDF GO:GO:0005769
GO:GO:0017112 GO:GO:0030676 GO:GO:0001662 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
Ensembl:ENSSSCT00000017539 Uniprot:F1SI31
Length = 1644
Score = 140 (54.3 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 48/154 (31%), Positives = 72/154 (46%)
Query: 34 GRRKGALDGNL--VSPTRLRPLVGVDIRFVA-AGCVSCHCVAV--DVEGRCYTWGRNERG 88
G R+ +L G L VSP LR V R V S A+ + +TWG+ + G
Sbjct: 472 GTRRLSLPGLLSQVSPRLLRRAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKDG 531
Query: 89 QLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIR 148
QLGHGD + R +P V L ++ AG H++ +T ++G N GQLG
Sbjct: 532 QLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSNTFGQLGHSDFP 591
Query: 149 NEIEPSPVRCLVSE--VTATACGADFTVWLSSVE 180
+ P + + SE V + A G D++++L E
Sbjct: 592 TTV-PRLAK-MNSENGVWSVAAGQDYSLFLVDTE 623
Score = 93 (37.8 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 52/204 (25%), Positives = 85/204 (41%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWG----RNERGQLGHGDKIQRDR 100
V+P RL G + A G H V + +G Y++G R+E +L I +
Sbjct: 30 VTPERLPGWTGKTVLQAALGVK--HGVLLTEDGEVYSFGTLPWRSEPAELCPSSPILEN- 86
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
+V + Y + A G H+ VTE G +G N GQ + + EP+PV
Sbjct: 87 -ALVGQ---YVVTVA-TGSFHSGAVTESGVVYMWGENSAGQCAVANQQYVPEPNPVSISD 141
Query: 161 SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
SE + A + L+ E ++ + + G G T V +P
Sbjct: 142 SETSPLL--AVRILQLACGEEHTLALSISREIWAWGTGCQLGLITTTFPVT-------KP 192
Query: 221 RAIAALAGETIVKVACGTNHTVAV 244
+ + LAG +++VACG H++A+
Sbjct: 193 QKVEHLAGRVVLQVACGAFHSLAL 216
Score = 91 (37.1 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 30/104 (28%), Positives = 51/104 (49%)
Query: 305 QLYMWGKLKNN--GDDWMYPK--PLMD--LSGWNLRCMDSGNMHHF-VGADSSCISWGHA 357
+++ WGK K+ G + P+ PL L G + +++G H + A S SWG
Sbjct: 521 EVWTWGKGKDGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSN 580
Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
+G+LG+ + + +P+ + V SVA G +SL +VD
Sbjct: 581 TFGQLGHSDF---PTTVPRLAKMNSENGVWSVAAGQDYSLFLVD 621
Score = 89 (36.4 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 44/168 (26%), Positives = 67/168 (39%)
Query: 150 EIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLP-QYGQL--GHGTDNEYNTK 206
E E S R LV A +C L G ++L A L ++G L G + T
Sbjct: 10 EAEGSKERGLVHVWQAGSCSVT-PERLPGWTGKTVLQAALGVKHGVLLTEDGEVYSFGTL 68
Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQ 266
+ A P AL G+ +V VA G+ H+ AV G VY WG G+ Q
Sbjct: 69 PWRSEPAELCPSSPILENALVGQYVVTVATGSFHSGAVTESGVVYMWGENSAGQCAVANQ 128
Query: 267 KDEWVPRRVDVFQRNNVLPPEAV----ISAGSVNSSCTAGGGQLYMWG 310
+ P V + + P AV ++ G ++ + +++ WG
Sbjct: 129 QYVPEPNPVSISD-SETSPLLAVRILQLACGEEHTLALSISREIWAWG 175
>UNIPROTKB|E2RSG1 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035023 "regulation of Rho protein signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005543 "phospholipid binding" evidence=IEA]
[GO:0005089 "Rho guanyl-nucleotide exchange factor activity"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
Pfam:PF02204 GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0005622 GO:GO:0005089 Gene3D:1.20.900.10 SUPFAM:SSF48065
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 GeneTree:ENSGT00600000084242 KO:K04575 OMA:AKPAIDF
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:AAEX03018021
RefSeq:XP_003640234.1 Ensembl:ENSCAFT00000019642 GeneID:100856109
KEGG:cfa:100856109 Uniprot:E2RSG1
Length = 1656
Score = 139 (54.0 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 48/154 (31%), Positives = 72/154 (46%)
Query: 34 GRRKGALDGNL--VSPTRLRPLVGVDIRFVA-AGCVSCHCVAV--DVEGRCYTWGRNERG 88
G R+ +L G L VSP LR V R V S A+ + +TWG+ + G
Sbjct: 477 GSRRLSLPGLLSQVSPRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKEG 536
Query: 89 QLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIR 148
QLGHGD + R +P V L ++ AG H++ +T ++G N GQLG
Sbjct: 537 QLGHGDVLPRLQPLCVKCLDGKEVIYLEAGGYHSLALTAKSQVYSWGSNTFGQLGHYDFP 596
Query: 149 NEIEPSPVRCLVSE--VTATACGADFTVWLSSVE 180
+ P + + SE V + A G D++++L E
Sbjct: 597 TTV-PRLAK-VSSENGVWSVAAGQDYSLFLVDTE 628
Score = 91 (37.1 bits), Expect = 9.7e-05, Sum P(2) = 9.7e-05
Identities = 30/104 (28%), Positives = 50/104 (48%)
Query: 305 QLYMWGKLKNN--GDDWMYPK--PLMD--LSGWNLRCMDSGNMHHF-VGADSSCISWGHA 357
+++ WGK K G + P+ PL L G + +++G H + A S SWG
Sbjct: 526 EVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIYLEAGGYHSLALTAKSQVYSWGSN 585
Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
+G+LG+ + + +P+ + V SVA G +SL +VD
Sbjct: 586 TFGQLGHYDF---PTTVPRLAKVSSENGVWSVAAGQDYSLFLVD 626
Score = 90 (36.7 bits), Expect = 9.7e-05, Sum P(2) = 9.7e-05
Identities = 49/201 (24%), Positives = 83/201 (41%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNE-RGQLGHGDKIQRDRPTI 103
V+P RL G + A G H V + +G Y++G R + +I P +
Sbjct: 30 VTPERLPGWGGKTVLQAALGVK--HGVLLTEDGEVYSFGTLPWRSEPA---EICPSCPIL 84
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEV 163
+ L + +G H VTE G + +G N GQ + + EP+PV SE
Sbjct: 85 ENALIGQFVVTVASGSFHNGAVTESGVAYMWGENSAGQCAVANQQYVPEPNPVSISDSET 144
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
++ A + L+ E ++ + + G G T V +P+ +
Sbjct: 145 SSLL--AVRILQLACGEEHTLALSISREIWAWGTGCQLGLITTTFPVT-------KPQKV 195
Query: 224 AALAGETIVKVACGTNHTVAV 244
LAG +++VACG H++A+
Sbjct: 196 EHLAGRVVLQVACGAFHSLAL 216
>SGD|S000000018 [details] [associations]
symbol:ATS1 "Protein required for modification of wobble
nucleosides in tRNA" species:4932 "Saccharomyces cerevisiae"
[GO:0007017 "microtubule-based process" evidence=IGI;ISS]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=IDA;IPI] [GO:0002098 "tRNA wobble uridine
modification" evidence=IMP] [GO:0000226 "microtubule cytoskeleton
organization" evidence=IGI;IMP] [GO:0007117 "budding cell bud
growth" evidence=IGI;IMP] SGD:S000000018 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0000226 EMBL:L05146 EMBL:BK006935
GO:GO:0007117 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
PIR:S36714 RefSeq:NP_009382.2 ProteinModelPortal:P31386 SMR:P31386
IntAct:P31386 MINT:MINT-2786397 STRING:P31386 PeptideAtlas:P31386
EnsemblFungi:YAL020C GeneID:851213 KEGG:sce:YAL020C CYGD:YAL020c
eggNOG:COG5184 HOGENOM:HOG000163478 KO:K15462 OMA:GAGCATS
OrthoDB:EOG4H75MP NextBio:968094 Genevestigator:P31386
GermOnline:YAL020C GO:GO:0002098 Uniprot:P31386
Length = 333
Score = 115 (45.5 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 32/97 (32%), Positives = 47/97 (48%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
Y +G N + QLG G D P V ++K G +H+V++T DGN + G N+
Sbjct: 5 YAFGSNGQRQLGLGHDEDMDTPQRSVPGDDGAIVRKIACGGNHSVMLTNDGNLVGCGDNR 64
Query: 139 HGQLGSGSIRNEIEP-SPVRCLVSEVTATACGADFTV 174
G+L S ++ PV + + V ACG D TV
Sbjct: 65 RGELDSAQALRQVHDWRPVE-VPAPVVDVACGWDTTV 100
Score = 55 (24.4 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 15/39 (38%), Positives = 20/39 (51%)
Query: 231 IVKVACGTNH----TVAVDSKGY---VYTWGFGGYGRLG 262
IV VA G+ H T + K + VY WG+G +G G
Sbjct: 263 IVGVATGSEHGILTTANQEGKSHCYNVYCWGWGEHGNCG 301
>RGD|1311697 [details] [associations]
symbol:Ibtk "inhibitor of Bruton agammaglobulinemia tyrosine
kinase" species:10116 "Rattus norvegicus" [GO:0001933 "negative
regulation of protein phosphorylation" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0030292
"protein tyrosine kinase inhibitor activity" evidence=ISO]
[GO:0051209 "release of sequestered calcium ion into cytosol"
evidence=ISO] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 GO:GO:0051209 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GO:GO:0030292 OrthoDB:EOG4J6RQ1
GeneTree:ENSGT00700000104160 IPI:IPI00370548
Ensembl:ENSRNOT00000056930 ArrayExpress:D3ZH46 Uniprot:D3ZH46
Length = 1352
Score = 143 (55.4 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 31/75 (41%), Positives = 41/75 (54%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H V + +G+ YT G G+LGHGD+ P +V LS + + A + HTVV+TED
Sbjct: 188 HSVFLSQQGQVYTCGHGRGGRLGHGDEQTCLVPRLVEGLSGHSCSQVAAAKDHTVVLTED 247
Query: 129 GNSLAFGWNKHGQLG 143
G FG N QLG
Sbjct: 248 GCVYTFGLNTFHQLG 262
Score = 39 (18.8 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 25/94 (26%), Positives = 38/94 (40%)
Query: 302 GGGQLYMWGKLKNNGDD--WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQY 359
G G+++ W L ++ W YP+ + +S L + N FV D G
Sbjct: 413 GAGRVFCWRSLSSSLKQCRWAYPRQV-SISDIAL----NRNEILFVTQD------GEGFK 461
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVIS--VAC 391
G+ + K KK DIL +H S V+C
Sbjct: 462 GKW----FEDKRKNSEKKADILPNLHHSSSDVSC 491
>DICTYBASE|DDB_G0289237 [details] [associations]
symbol:tirA "Toll-Interleukin (TIR) receptor
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0008283 "cell proliferation" evidence=IMP] [GO:0006952 "defense
response" evidence=IMP] [GO:0007165 "signal transduction"
evidence=IEA] InterPro:IPR000157 InterPro:IPR002110 Pfam:PF13676
PROSITE:PS50088 PROSITE:PS50104 SMART:SM00248 InterPro:IPR001357
dictyBase:DDB_G0289237 Pfam:PF00533 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0007165 GO:GO:0006952 GO:GO:0008283 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GenomeReviews:CM000154_GR GO:GO:0005622 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:AAFI02000131
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 SMART:SM00292
SUPFAM:SSF52113 PROSITE:PS50172 SUPFAM:SSF52200 RefSeq:XP_636358.1
ProteinModelPortal:Q54HT1 EnsemblProtists:DDB0232375 GeneID:8627031
KEGG:ddi:DDB_G0289237 eggNOG:NOG261364 InParanoid:Q54HT1
OMA:WRAEITR Uniprot:Q54HT1
Length = 1336
Score = 135 (52.6 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 56/219 (25%), Positives = 103/219 (47%)
Query: 70 CVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDG 129
C+ + + RCY WG + Q K+++ +++ Y++ G SH+V++
Sbjct: 351 CMITE-DNRCYIWGNIKSNQ-----KVEQ-----LAD--HYQVDYCSVGGSHSVMIKRGI 397
Query: 130 NSLAFGWNKHGQLG--SGS-------------IRNEIEPSPV---RCLVSEVTATACGAD 171
+++ G NK GQLG +G+ I N+I+ S + + +V +CG D
Sbjct: 398 HTV--GLNKFGQLGYKNGNTNCIGGGGNNKLMIENQIQRSISIINQNFLKKVLMVSCGKD 455
Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
F V L++ EG + + G GQLG G N + ++ +KL P + + + I
Sbjct: 456 FNVLLTN-EG-QVFSWGKNDQGQLGLG--NSDSKENYEIKLVNFDDPYD----SNSNKFI 507
Query: 232 VKVACGTNHTVAVDSKGY------VYTWGFGGYGRLGHR 264
++CG NH++A++S +Y WG G++G +
Sbjct: 508 SFISCGGNHSIAIESNSSTDGNCRLYGWGSNSQGQIGEK 546
>UNIPROTKB|Q5BIW4 [details] [associations]
symbol:ALS2 "Alsin" species:9598 "Pan troglodytes"
[GO:0001662 "behavioral fear response" evidence=ISS] [GO:0001726
"ruffle" evidence=ISS] [GO:0001881 "receptor recycling"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005769
"early endosome" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0006979 "response to oxidative stress" evidence=ISS]
[GO:0007528 "neuromuscular junction development" evidence=ISS]
[GO:0007626 "locomotory behavior" evidence=ISS] [GO:0008104
"protein localization" evidence=ISS] [GO:0014069 "postsynaptic
density" evidence=ISS] [GO:0016050 "vesicle organization"
evidence=ISS] [GO:0016197 "endosomal transport" evidence=ISS]
[GO:0017112 "Rab guanyl-nucleotide exchange factor activity"
evidence=ISS] [GO:0017137 "Rab GTPase binding" evidence=ISS]
[GO:0030027 "lamellipodium" evidence=ISS] [GO:0030425 "dendrite"
evidence=ISS] [GO:0030676 "Rac guanyl-nucleotide exchange factor
activity" evidence=ISS] [GO:0031982 "vesicle" evidence=ISS]
[GO:0032313 "regulation of Rab GTPase activity" evidence=ISS]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=ISS] [GO:0035249 "synaptic transmission, glutamatergic"
evidence=ISS] [GO:0042803 "protein homodimerization activity"
evidence=ISS] [GO:0043197 "dendritic spine" evidence=ISS]
[GO:0043234 "protein complex" evidence=ISS] [GO:0043539 "protein
serine/threonine kinase activator activity" evidence=ISS]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=ISS] [GO:0048812 "neuron projection morphogenesis"
evidence=ISS] [GO:0051036 "regulation of endosome size"
evidence=ISS] [GO:0071902 "positive regulation of protein
serine/threonine kinase activity" evidence=ISS] [GO:0005813
"centrosome" evidence=ISS] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=ISS] InterPro:IPR000219
InterPro:IPR001849 Pfam:PF00621 PROSITE:PS00741 PROSITE:PS50003
PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
Pfam:PF02204 GO:GO:0005829 GO:GO:0043234 GO:GO:0042803
GO:GO:0014069 GO:GO:0008104 GO:GO:0006979 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0030027
GO:GO:0016197 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0001726 eggNOG:COG4642
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 CTD:57679 HOVERGEN:HBG037320 KO:K04575
OrthoDB:EOG4FTVZP GO:GO:0005769 GO:GO:0031982 GO:GO:0017137
GO:GO:0017112 GO:GO:0030676 GO:GO:0001662 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
HOGENOM:HOG000033908 EMBL:BK005194 RefSeq:NP_001073389.1
UniGene:Ptr.813 ProteinModelPortal:Q5BIW4 STRING:Q5BIW4
PRIDE:Q5BIW4 GeneID:470613 KEGG:ptr:470613 InParanoid:Q5BIW4
NextBio:20847741 Uniprot:Q5BIW4
Length = 1657
Score = 144 (55.7 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 48/154 (31%), Positives = 72/154 (46%)
Query: 34 GRRKGALDGNL--VSPTRLRPLVGVDIRFVA-AGCVSCHCVAV--DVEGRCYTWGRNERG 88
G R+ +L G L VSP LR V R V S A+ + +TWG+ + G
Sbjct: 478 GSRRLSLPGLLSQVSPRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKEG 537
Query: 89 QLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIR 148
QLGHGD + R +P V L ++ AG H++ +T ++G N GQLG
Sbjct: 538 QLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSNTFGQLGHSDFP 597
Query: 149 NEIEPSPVRCLVSE--VTATACGADFTVWLSSVE 180
+ P + + SE V + A G D++++L E
Sbjct: 598 TTV-PRLAK-ISSENGVWSVAAGRDYSLFLVDTE 629
Score = 93 (37.8 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 31/104 (29%), Positives = 50/104 (48%)
Query: 305 QLYMWGKLKNN--GDDWMYPK--PLMD--LSGWNLRCMDSGNMHHF-VGADSSCISWGHA 357
+++ WGK K G + P+ PL L G + +++G H + A S SWG
Sbjct: 527 EVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSN 586
Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
+G+LG+ + + +P+ I V SVA G +SL +VD
Sbjct: 587 TFGQLGHSDF---PTTVPRLAKISSENGVWSVAAGRDYSLFLVD 627
Score = 89 (36.4 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 47/200 (23%), Positives = 85/200 (42%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
++P RL G + A G H V + +G Y++G + G + I P +
Sbjct: 30 ITPERLPGWGGKTVLQAALGVK--HGVLLTEDGEVYSFGTLP-WRSGPVE-ICPSSPILE 85
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT 164
+ L + G H+ VT++G + +G N GQ + + EP+PV SE
Sbjct: 86 NALVGQYVVTVATGSFHSGAVTDNGVAYMWGENSAGQCAVANQQYVPEPNPVSIADSE-- 143
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
A+ A + L+ E ++ + + G G + A+ +P+ +
Sbjct: 144 ASPLLAVRILQLACGEEHTLALSISREIWAWGTGCQL------GLITTAFPVT-KPQKVE 196
Query: 225 ALAGETIVKVACGTNHTVAV 244
LAG +++VACG H++A+
Sbjct: 197 HLAGRVVLQVACGAFHSLAL 216
Score = 39 (18.8 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 13/34 (38%), Positives = 15/34 (44%)
Query: 361 ELGYGPYGQKSSAMPKKVDILEGMHVISVACGYG 394
E GYG Y + AM K+ D G CG G
Sbjct: 1081 EDGYGEYRIPNKAMNKE-DHYVGHWKEGKMCGQG 1113
>UNIPROTKB|Q96Q42 [details] [associations]
symbol:ALS2 "Alsin" species:9606 "Homo sapiens" [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001881 "receptor recycling"
evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0007626
"locomotory behavior" evidence=IEA] [GO:0008104 "protein
localization" evidence=IEA] [GO:0008219 "cell death" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016050 "vesicle organization"
evidence=IEA] [GO:0016197 "endosomal transport" evidence=IEA]
[GO:0016601 "Rac protein signal transduction" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0032313 "regulation of Rab
GTPase activity" evidence=IEA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0005769 "early endosome"
evidence=IDA] [GO:0007032 "endosome organization" evidence=IGI;NAS]
[GO:0043234 "protein complex" evidence=IDA] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0017137 "Rab GTPase binding" evidence=NAS;IDA] [GO:0051036
"regulation of endosome size" evidence=IEP] [GO:0032855 "positive
regulation of Rac GTPase activity" evidence=IDA] [GO:0035022
"positive regulation of Rac protein signal transduction"
evidence=IC] [GO:0030425 "dendrite" evidence=IDA] [GO:0048812
"neuron projection morphogenesis" evidence=IDA] [GO:0043539
"protein serine/threonine kinase activator activity" evidence=IDA]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=IDA] [GO:0001726 "ruffle" evidence=ISS] [GO:0030027
"lamellipodium" evidence=ISS] [GO:0005087 "Ran guanyl-nucleotide
exchange factor activity" evidence=NAS] [GO:0030676 "Rac
guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0042803 "protein homodimerization activity" evidence=IPI]
[GO:0030426 "growth cone" evidence=ISS] [GO:0005813 "centrosome"
evidence=IDA] [GO:0071902 "positive regulation of protein
serine/threonine kinase activity" evidence=IDA] InterPro:IPR000219
InterPro:IPR001849 Pfam:PF00621 PROSITE:PS00741 PROSITE:PS50003
PROSITE:PS50010 SMART:SM00233 EMBL:AB053305 EMBL:AB053306
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 GO:GO:0005829
GO:GO:0005813 GO:GO:0043234 GO:GO:0014069 GO:GO:0008104
GO:GO:0006979 GO:GO:0016020 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0008219 EMBL:CH471063 GO:GO:0030424
GO:GO:0043025 GO:GO:0030425 GO:GO:0007528 GO:GO:0001701
GO:GO:0048812 GO:GO:0007626 GO:GO:0035249 GO:GO:0043539
GO:GO:0030027 GO:GO:0016197 GO:GO:0030426 Gene3D:1.20.900.10
SUPFAM:SSF48065 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0007409 GO:GO:0001726 GO:GO:0016601
GO:GO:0007032 eggNOG:COG4642 InterPro:IPR003409 InterPro:IPR003123
Pfam:PF02493 SMART:SM00698 PROSITE:PS51205 EMBL:AF391100
EMBL:AB046783 EMBL:AK023024 EMBL:AC007242 EMBL:AC007279
EMBL:BC029174 IPI:IPI00242146 IPI:IPI00295004 IPI:IPI00295005
RefSeq:NP_001129217.1 RefSeq:NP_065970.2 UniGene:Hs.471096
UniGene:Hs.621812 ProteinModelPortal:Q96Q42 SMR:Q96Q42
MINT:MINT-1632128 STRING:Q96Q42 PhosphoSite:Q96Q42 DMDM:296434394
PaxDb:Q96Q42 PRIDE:Q96Q42 Ensembl:ENST00000264276
Ensembl:ENST00000467448 GeneID:57679 KEGG:hsa:57679 UCSC:uc002uyo.3
UCSC:uc002uyq.3 UCSC:uc002uyr.3 CTD:57679 GeneCards:GC02M202564
H-InvDB:HIX0200249 HGNC:HGNC:443 HPA:HPA046588 MIM:205100
MIM:606352 MIM:606353 MIM:607225 neXtProt:NX_Q96Q42 Orphanet:803
Orphanet:293168 Orphanet:300605 Orphanet:247604 PharmGKB:PA24732
HOVERGEN:HBG037320 InParanoid:Q96Q42 KO:K04575 OMA:AKPAIDF
OrthoDB:EOG4FTVZP ChiTaRS:ALS2 GenomeRNAi:57679 NextBio:64490
ArrayExpress:Q96Q42 Bgee:Q96Q42 CleanEx:HS_ALS2
Genevestigator:Q96Q42 GermOnline:ENSG00000003393 GO:GO:0005769
GO:GO:0031982 GO:GO:0017137 GO:GO:0017112 GO:GO:0030676
GO:GO:0005087 GO:GO:0001662 GO:GO:0032855 GO:GO:0035022
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
Uniprot:Q96Q42
Length = 1657
Score = 143 (55.4 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 48/154 (31%), Positives = 72/154 (46%)
Query: 34 GRRKGALDGNL--VSPTRLRPLVGVDIRFVA-AGCVSCHCVAV--DVEGRCYTWGRNERG 88
G R+ +L G L VSP LR V R V S A+ + +TWG+ + G
Sbjct: 478 GSRRLSLPGLLSQVSPRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKEG 537
Query: 89 QLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIR 148
QLGHGD + R +P V L ++ AG H++ +T ++G N GQLG
Sbjct: 538 QLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSNTFGQLGHSDFP 597
Query: 149 NEIEPSPVRCLVSE--VTATACGADFTVWLSSVE 180
+ P + + SE V + A G D++++L E
Sbjct: 598 TTV-PRLAK-ISSENGVWSIAAGRDYSLFLVDTE 629
Score = 92 (37.4 bits), Expect = 9.6e-05, Sum P(2) = 9.6e-05
Identities = 30/104 (28%), Positives = 50/104 (48%)
Query: 305 QLYMWGKLKNN--GDDWMYPK--PLMD--LSGWNLRCMDSGNMHHF-VGADSSCISWGHA 357
+++ WGK K G + P+ PL L G + +++G H + A S SWG
Sbjct: 527 EVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSN 586
Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
+G+LG+ + + +P+ I V S+A G +SL +VD
Sbjct: 587 TFGQLGHSDF---PTTVPRLAKISSENGVWSIAAGRDYSLFLVD 627
Score = 89 (36.4 bits), Expect = 9.6e-05, Sum P(2) = 9.6e-05
Identities = 50/201 (24%), Positives = 88/201 (43%)
Query: 45 VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
++P RL G + A G H V + +G Y++G + G + I P +
Sbjct: 30 ITPERLPGWGGKTVLQAALGVK--HGVLLTEDGEVYSFGTLP-WRSGPVE-ICPSSPILE 85
Query: 105 SEL-SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEV 163
+ L +Y I A G H+ VT++G + +G N GQ + + EP+PV SE
Sbjct: 86 NALVGQYVITVA-TGSFHSGAVTDNGVAYMWGENSAGQCAVANQQYVPEPNPVSIADSE- 143
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
A+ A + L+ E ++ + + G G + A+ +P+ +
Sbjct: 144 -ASPLLAVRILQLACGEEHTLALSISREIWAWGTGCQL------GLITTAFPVT-KPQKV 195
Query: 224 AALAGETIVKVACGTNHTVAV 244
LAG +++VACG H++A+
Sbjct: 196 EHLAGRVVLQVACGAFHSLAL 216
Score = 39 (18.8 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 13/34 (38%), Positives = 15/34 (44%)
Query: 361 ELGYGPYGQKSSAMPKKVDILEGMHVISVACGYG 394
E GYG Y + AM K+ D G CG G
Sbjct: 1081 EDGYGEYRIPNKAMNKE-DHYVGHWKEGKMCGQG 1113
>ASPGD|ASPL0000040680 [details] [associations]
symbol:AN2874 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] INTERPRO:IPR000408 EMBL:BN001306 EMBL:AACD01000051
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
RefSeq:XP_660478.1 ProteinModelPortal:Q5B9A6
EnsemblFungi:CADANIAT00010215 GeneID:2873908 KEGG:ani:AN2874.2
Uniprot:Q5B9A6
Length = 1365
Score = 131 (51.2 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 82/322 (25%), Positives = 125/322 (38%)
Query: 80 YTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
Y G N GQLG +G +Q +PT ++L + + AG H + +T D +G N
Sbjct: 907 YVLGENGNGQLGMGNGTPVQYKQPTKNTQLPD--VVQVAAGGEHCIALTHDNKIYTWGDN 964
Query: 138 KHGQLGSGSIRNEIEPS-PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQL- 195
HGQLG + N + P SEV D+T++ V S L +G +
Sbjct: 965 SHGQLGR--LTNSMTAQMPGEVDFSEVNLP----DYTIFAQVVATRSACFV-LTMFGDVY 1017
Query: 196 GHGTDNE-Y---NTKDSSVKLAY----EAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G GT +E Y N + L + + Q P I L + + ++A G++H +A S
Sbjct: 1018 GWGTFSEIYEDENGEQHCEPLGFRHQCKCQRTPLHIQEL--QNVKRLAAGSDHVLAQIS- 1074
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G G + K V +R D A V S GQL
Sbjct: 1075 ---ILIG-GNRASSSASKMKGSRVRKRKDTIAAEGSSTGSATKVRDVVRSWGAYKRGQL- 1129
Query: 308 MWGKLKNNGDDWMYPKPLMDLSGWNLRCMD---------SGNMHHFVGADSS-CISWGHA 357
G+ N + + P L D G + R + SG H FV +S ++WG+
Sbjct: 1130 --GRTAANIANCLNPL-LCDFPGNSSRALKNPDNVSTIGSGKFHSFVIKESGDFLAWGYN 1186
Query: 358 QYGELGYGPYGQKSSAMPKKVD 379
++ + + P KVD
Sbjct: 1187 KFAQTAFVPPAASVLRRDLKVD 1208
>WB|WBGene00017190 [details] [associations]
symbol:F07B7.12 species:6239 "Caenorhabditis elegans"
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR027047
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR012983 Pfam:PF08005 EMBL:FO081059
GeneTree:ENSGT00390000011403 KO:K10693 PANTHER:PTHR12846
eggNOG:NOG240798 RefSeq:NP_505281.1 ProteinModelPortal:Q965Y9
SMR:Q965Y9 STRING:Q965Y9 PaxDb:Q965Y9 EnsemblMetazoa:F07B7.12
GeneID:184118 KEGG:cel:CELE_F07B7.12 UCSC:F07B7.12 CTD:184118
WormBase:F07B7.12 InParanoid:Q965Y9 OMA:KESRITH NextBio:923582
Uniprot:Q965Y9
Length = 1900
Score = 132 (51.5 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 37/132 (28%), Positives = 64/132 (48%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
D++ + C + H V + + R +T+G N GQLG GD + ++ P V S I +
Sbjct: 766 DVKVSSVSCGNFHTVLLASDRRVFTFGSNCHGQLGVGDTLSKNTPQQVILPSDTVIVQVA 825
Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGAD-FTVW 175
AG +HT++ DG+ FG GQL R E + + +V+ G + F W
Sbjct: 826 AGSNHTILRANDGSVFTFGAFGKGQLA----RPAGEKAGWNAIPEKVSGFGPGFNAFAGW 881
Query: 176 LSSVEGASILNA 187
+ + +SI+++
Sbjct: 882 IGADGDSSIIHS 893
Score = 104 (41.7 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 43/153 (28%), Positives = 67/153 (43%)
Query: 135 GWNKHGQLGSGSIRNEIEPSPVRCLVSE------VTATACGADFTVWLSSVEGASILNAG 188
G +H Q S + P R ++S+ V++ +CG TV L+S + G
Sbjct: 735 GRAQHVQFSSTAAPQRSTLHPSRVILSQGPHDVKVSSVSCGNFHTVLLAS--DRRVFTFG 792
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
+GQLG G NT P+ + + IV+VA G+NHT+ + G
Sbjct: 793 SNCHGQLGVGDTLSKNT--------------PQQVILPSDTVIVQVAAGSNHTILRANDG 838
Query: 249 YVYTWGFGGYGRLGHRE-QKDEW--VPRRVDVF 278
V+T+G G G+L +K W +P +V F
Sbjct: 839 SVFTFGAFGKGQLARPAGEKAGWNAIPEKVSGF 871
Score = 68 (29.0 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 26/96 (27%), Positives = 39/96 (40%)
Query: 49 RLRPLVGVDIRFVAAGCVSCHCVA-VDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
RLR LV + R + C S H V G+ + G H ++ +++ L
Sbjct: 559 RLRRLVPSNRRKIVHVCASGHVYGYVSENGKIFMGGL-------HTMRVNVSSQ-MLNGL 610
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG 143
I G+SH V VT +G+ +G N Q G
Sbjct: 611 DNVMISSLALGKSHGVAVTRNGHLFTWGLNNMNQCG 646
>UNIPROTKB|E9PS70 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058
EMBL:AC124078 IPI:IPI00985461 ProteinModelPortal:E9PS70 SMR:E9PS70
Ensembl:ENST00000532389 ArrayExpress:E9PS70 Bgee:E9PS70
Uniprot:E9PS70
Length = 137
Score = 102 (41.0 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 31/99 (31%), Positives = 48/99 (48%)
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
P+AI L E +V +A G H VA + G V+ WG G G R + +P +
Sbjct: 31 PQAIE-LHKEKVVCIAAGLRHAVAATASGIVFQWGTG-LASCGRRLCPGQTLPLFFTAKE 88
Query: 280 RNNVLPPE---AV-ISAGSVNSSCTAGGGQLYMWGKLKN 314
+ V E A+ + AGS +S+ G++Y+WG K+
Sbjct: 89 PSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKH 127
>WB|WBGene00004457 [details] [associations]
symbol:rpm-1 species:6239 "Caenorhabditis elegans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0050807 "regulation of synapse organization" evidence=IGI;IMP]
[GO:0040011 "locomotion" evidence=IGI] [GO:0043409 "negative
regulation of MAPK cascade" evidence=IGI] [GO:0031647 "regulation
of protein stability" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0018991 "oviposition"
evidence=IMP] [GO:0030424 "axon" evidence=IDA] [GO:0031594
"neuromuscular junction" evidence=IDA] [GO:0045202 "synapse"
evidence=IDA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0031435 "mitogen-activated protein kinase kinase
kinase binding" evidence=IPI] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR027047 Pfam:PF00643 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
INTERPRO:IPR000408 Pfam:PF00415 Prosite:PS00518 GO:GO:0005634
GO:GO:0018991 GO:GO:0006915 GO:GO:0006355 GO:GO:0046872
GO:GO:0030424 GO:GO:0008270 GO:GO:0031594 GO:GO:0010171
GO:GO:0040011 GO:GO:0006351 GO:GO:0031647 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
PROSITE:PS51284 GO:GO:0043409 InterPro:IPR012983 Pfam:PF08005
GO:GO:0050807 GeneTree:ENSGT00390000011403 KO:K10693
PANTHER:PTHR12846 eggNOG:NOG240798 EMBL:FO080217 PIR:T29165
RefSeq:NP_505267.1 ProteinModelPortal:Q17551 SMR:Q17551
STRING:Q17551 PaxDb:Q17551 EnsemblMetazoa:C01B7.6 GeneID:179259
KEGG:cel:CELE_C01B7.6 UCSC:C01B7.6 CTD:179259 WormBase:C01B7.6
HOGENOM:HOG000016145 InParanoid:Q17551 OMA:LLSILHW NextBio:904596
Uniprot:Q17551
Length = 3766
Score = 132 (51.5 bits), Expect = 0.00017, P = 0.00017
Identities = 37/132 (28%), Positives = 64/132 (48%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
D++ + C + H V + + R +T+G N GQLG GD + ++ P V S I +
Sbjct: 766 DVKVSSVSCGNFHTVLLASDRRVFTFGSNCHGQLGVGDTLSKNTPQQVILPSDTVIVQVA 825
Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGAD-FTVW 175
AG +HT++ DG+ FG GQL R E + + +V+ G + F W
Sbjct: 826 AGSNHTILRANDGSVFTFGAFGKGQLA----RPAGEKAGWNAIPEKVSGFGPGFNAFAGW 881
Query: 176 LSSVEGASILNA 187
+ + +SI+++
Sbjct: 882 IGADGDSSIIHS 893
>POMBASE|SPCC330.11 [details] [associations]
symbol:btb1 "BTB/POZ domain protein Btb1" species:4896
"Schizosaccharomyces pombe" [GO:0000151 "ubiquitin ligase complex"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IC] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00023 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 UniPathway:UPA00143
PomBase:SPCC330.11 INTERPRO:IPR000408 Pfam:PF00415 EMBL:CU329672
GenomeReviews:CU329672_GR Gene3D:1.25.40.20 InterPro:IPR020683
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0006511 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0000151 eggNOG:COG5184
PIR:T41321 RefSeq:NP_587711.1 ProteinModelPortal:O74881
IntAct:O74881 STRING:O74881 EnsemblFungi:SPCC330.11.1
GeneID:2538714 KEGG:spo:SPCC330.11 OMA:STSELCT OrthoDB:EOG42VCR5
NextBio:20799899 Uniprot:O74881
Length = 1347
Score = 127 (49.8 bits), Expect = 0.00020, P = 0.00020
Identities = 40/132 (30%), Positives = 64/132 (48%)
Query: 52 PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG-HGDKIQRD-----RPTIVS 105
P+ G+ + + H +A+ G Y+WG+N G+LG D++++D P +S
Sbjct: 241 PIPGIIHKVIQISVSHTHSLALTKFGSIYSWGKNGSGELGLSNDELKKDDPIQITPRRIS 300
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSPVRCLVSEVT 164
Y+I AG+S++V T D + ++G N +GQLG S I P V L+S V
Sbjct: 301 AFKDYQIIGMAAGKSYSVAWT-DTDIYSWGLN-NGQLGISDHISVVSTPRRVAGLLSPVI 358
Query: 165 ATACGADFTVWL 176
C T+ L
Sbjct: 359 HAVCTTRATICL 370
>UNIPROTKB|Q8E833 [details] [associations]
symbol:Q8E833 "Expressed lipoprotein" species:211586
"Shewanella oneidensis MR-1" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 HSSP:O87916
EMBL:AE014300 GenomeReviews:AE014300_GR HOGENOM:HOG000147906
ProtClustDB:CLSK576353 RefSeq:NP_720436.1 ProteinModelPortal:Q8E833
GeneID:1172533 KEGG:son:SO_A0110 PATRIC:23529378 Uniprot:Q8E833
Length = 1408
Score = 109 (43.4 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 69/254 (27%), Positives = 110/254 (43%)
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
A+ +G TWG ++ G GD ++ +L+ +K + S + EDG+
Sbjct: 993 ALKTDGSVVTWGYSDYG----GDS-----SSVAGQLTS-GVKVIDSTSSAFAAIKEDGSV 1042
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA-TACGADFTV--WLSSVEGASILNAG 188
+ +G + +G S S+ ++ S V+ + S +A A D +V W S G S AG
Sbjct: 1043 VTWGDSPYGG-DSSSVAGKLT-SGVKVIYSNSSAFAAVKQDGSVVTW-GSYGGDSSSVAG 1099
Query: 189 LPQYG-QLGHGTDNEYNT-----KDSSVKLAYEAQPRPRAIAALAGETI--VKVACGTNH 240
G ++ + TD+E+ +D SV + + P +++AG+ VKV TN+
Sbjct: 1100 QLTSGVKVIYSTDSEFGAFAAVKEDGSV-VTWGNSPYGGDSSSVAGQLTSGVKVIYSTNN 1158
Query: 241 T-VAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV-FQRNNVLPPEAVISAGSVNSS 298
AV G V TWG G G G + V V + NN AV GSV +
Sbjct: 1159 AFAAVKEDGSVVTWGDSGAG--GDSSSVAGQLTSGVKVIYSTNNAFA--AVKEDGSVVTW 1214
Query: 299 CTAGGGQLYMWGKL 312
GG + G+L
Sbjct: 1215 GGYGGDSSSVAGQL 1228
Score = 64 (27.6 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 23/77 (29%), Positives = 35/77 (45%)
Query: 304 GQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSG-NMHHFVGADSSCISWGHAQYGEL 362
G + WG N GD L SG ++ +DS + V D S ++WG++ YG
Sbjct: 1249 GSVVTWGDSGNGGDSSSVAGQLT--SG--VKVIDSTYSAFAAVKEDGSVVAWGNSGYGGD 1304
Query: 363 GYGPYGQKSSAMPKKVD 379
GQ +S + K +D
Sbjct: 1305 SSSVAGQLTSGV-KVID 1320
>TIGR_CMR|SO_A0110 [details] [associations]
symbol:SO_A0110 "expressed lipoprotein" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 HSSP:O87916
EMBL:AE014300 GenomeReviews:AE014300_GR HOGENOM:HOG000147906
ProtClustDB:CLSK576353 RefSeq:NP_720436.1 ProteinModelPortal:Q8E833
GeneID:1172533 KEGG:son:SO_A0110 PATRIC:23529378 Uniprot:Q8E833
Length = 1408
Score = 109 (43.4 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 69/254 (27%), Positives = 110/254 (43%)
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
A+ +G TWG ++ G GD ++ +L+ +K + S + EDG+
Sbjct: 993 ALKTDGSVVTWGYSDYG----GDS-----SSVAGQLTS-GVKVIDSTSSAFAAIKEDGSV 1042
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA-TACGADFTV--WLSSVEGASILNAG 188
+ +G + +G S S+ ++ S V+ + S +A A D +V W S G S AG
Sbjct: 1043 VTWGDSPYGG-DSSSVAGKLT-SGVKVIYSNSSAFAAVKQDGSVVTW-GSYGGDSSSVAG 1099
Query: 189 LPQYG-QLGHGTDNEYNT-----KDSSVKLAYEAQPRPRAIAALAGETI--VKVACGTNH 240
G ++ + TD+E+ +D SV + + P +++AG+ VKV TN+
Sbjct: 1100 QLTSGVKVIYSTDSEFGAFAAVKEDGSV-VTWGNSPYGGDSSSVAGQLTSGVKVIYSTNN 1158
Query: 241 T-VAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV-FQRNNVLPPEAVISAGSVNSS 298
AV G V TWG G G G + V V + NN AV GSV +
Sbjct: 1159 AFAAVKEDGSVVTWGDSGAG--GDSSSVAGQLTSGVKVIYSTNNAFA--AVKEDGSVVTW 1214
Query: 299 CTAGGGQLYMWGKL 312
GG + G+L
Sbjct: 1215 GGYGGDSSSVAGQL 1228
Score = 64 (27.6 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 23/77 (29%), Positives = 35/77 (45%)
Query: 304 GQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSG-NMHHFVGADSSCISWGHAQYGEL 362
G + WG N GD L SG ++ +DS + V D S ++WG++ YG
Sbjct: 1249 GSVVTWGDSGNGGDSSSVAGQLT--SG--VKVIDSTYSAFAAVKEDGSVVAWGNSGYGGD 1304
Query: 363 GYGPYGQKSSAMPKKVD 379
GQ +S + K +D
Sbjct: 1305 SSSVAGQLTSGV-KVID 1320
>CGD|CAL0001436 [details] [associations]
symbol:ATS1 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0002098 "tRNA
wobble uridine modification" evidence=IEA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=IEA] [GO:0007117 "budding cell
bud growth" evidence=IEA] INTERPRO:IPR000408 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:AACQ01000073 PRINTS:PR00633
PROSITE:PS00626 eggNOG:COG5184 KO:K15462 RefSeq:XP_716156.1
ProteinModelPortal:Q5A364 STRING:Q5A364 GeneID:3642213
KEGG:cal:CaO19.13757 CGD:CAL0062057 Uniprot:Q5A364
Length = 336
Score = 76 (31.8 bits), Expect = 0.00041, Sum P(3) = 0.00041
Identities = 27/99 (27%), Positives = 48/99 (48%)
Query: 102 TIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS 161
T+ SE+ +K AG G +HT+V+ ++G + G N+ GQ G R E + +
Sbjct: 36 TMSSEVPGKPMKIAGGG-NHTMVILDNGEVFSCGSNEFGQCGLP--RGESLGVFHKVPGN 92
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTD 200
+ +CG +F++ + + GL G+LG G +
Sbjct: 93 DWLDISCGWEFSILVKRSGEVYVCGRGLK--GELGLGKE 129
Score = 62 (26.9 bits), Expect = 0.00041, Sum P(3) = 0.00041
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 240 HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
HT+ + G V WG G+LG E K W P+
Sbjct: 153 HTIIQTTNGLV-GWGNSRKGQLGETEDKIMWTPK 185
Score = 58 (25.5 bits), Expect = 0.00041, Sum P(3) = 0.00041
Identities = 25/130 (19%), Positives = 52/130 (40%)
Query: 274 RVDVFQRNNVLP-PEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWN 332
RV +F ++++ PE+ ++ + S + + NN D ++P S
Sbjct: 211 RVKIFGKSSIKNIPESTVARVAAMWSSVHILSETNVLQSFGNNSHDQLFPNN----SSVA 266
Query: 333 LRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
+ G+ H V +D+ +WG +++G G K + V+ + G
Sbjct: 267 VEEYAIGSEHGLVTSDNIVYAWGWSEHGNCGTSNASDKVTFDYLNKLYTGSAKVVLIGAG 326
Query: 393 YGHSLVIVDR 402
S V+V++
Sbjct: 327 CATSWVVVEK 336
>UNIPROTKB|Q5A364 [details] [associations]
symbol:ATS1 "Putative uncharacterized protein ATS1"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] INTERPRO:IPR000408
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
EMBL:AACQ01000073 PRINTS:PR00633 PROSITE:PS00626 eggNOG:COG5184
KO:K15462 RefSeq:XP_716156.1 ProteinModelPortal:Q5A364
STRING:Q5A364 GeneID:3642213 KEGG:cal:CaO19.13757 CGD:CAL0062057
Uniprot:Q5A364
Length = 336
Score = 76 (31.8 bits), Expect = 0.00041, Sum P(3) = 0.00041
Identities = 27/99 (27%), Positives = 48/99 (48%)
Query: 102 TIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS 161
T+ SE+ +K AG G +HT+V+ ++G + G N+ GQ G R E + +
Sbjct: 36 TMSSEVPGKPMKIAGGG-NHTMVILDNGEVFSCGSNEFGQCGLP--RGESLGVFHKVPGN 92
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTD 200
+ +CG +F++ + + GL G+LG G +
Sbjct: 93 DWLDISCGWEFSILVKRSGEVYVCGRGLK--GELGLGKE 129
Score = 62 (26.9 bits), Expect = 0.00041, Sum P(3) = 0.00041
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 240 HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
HT+ + G V WG G+LG E K W P+
Sbjct: 153 HTIIQTTNGLV-GWGNSRKGQLGETEDKIMWTPK 185
Score = 58 (25.5 bits), Expect = 0.00041, Sum P(3) = 0.00041
Identities = 25/130 (19%), Positives = 52/130 (40%)
Query: 274 RVDVFQRNNVLP-PEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWN 332
RV +F ++++ PE+ ++ + S + + NN D ++P S
Sbjct: 211 RVKIFGKSSIKNIPESTVARVAAMWSSVHILSETNVLQSFGNNSHDQLFPNN----SSVA 266
Query: 333 LRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
+ G+ H V +D+ +WG +++G G K + V+ + G
Sbjct: 267 VEEYAIGSEHGLVTSDNIVYAWGWSEHGNCGTSNASDKVTFDYLNKLYTGSAKVVLIGAG 326
Query: 393 YGHSLVIVDR 402
S V+V++
Sbjct: 327 CATSWVVVEK 336
>POMBASE|SPAC10F6.04 [details] [associations]
symbol:SPAC10F6.04 "RCC domain protein Ats1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006400 "tRNA modification"
evidence=ISO] [GO:0007017 "microtubule-based process" evidence=ISO]
PomBase:SPAC10F6.04 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829
GO:GO:0005634 EMBL:CU329670 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0006400 GO:GO:0007017 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
KO:K15462 OrthoDB:EOG4H75MP PIR:T37498 RefSeq:NP_593255.1
ProteinModelPortal:O42645 STRING:O42645 EnsemblFungi:SPAC10F6.04.1
GeneID:2542973 KEGG:spo:SPAC10F6.04 OMA:WIVIEEN NextBio:20804007
Uniprot:O42645
Length = 351
Score = 114 (45.2 bits), Expect = 0.00086, P = 0.00086
Identities = 50/188 (26%), Positives = 79/188 (42%)
Query: 83 GRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQL 142
G N QLG + P IV I+K G +HT+++ ED A G N+ GQ
Sbjct: 6 GSNGNFQLGLNNDEDVYSPQIVP--FDRAIEKISCGGNHTLLLDEDSQLWACGDNRKGQC 63
Query: 143 G---SGSIRNEIEPSPVRCL--VSEV--TATACGADFTVWLSSVEGASILNAGLPQYGQL 195
G + N + P +R VS CG +F+V + + + + G G+L
Sbjct: 64 GYEVKEPLYNPLSPDYLRIFTRVSHERWVFLTCGWEFSV-IVHADRRRVCSCGEGLSGEL 122
Query: 196 GHGTDNEYNTKD-SSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
G G N N++ + + Y E I+ ++ G H + V ++G +Y G
Sbjct: 123 GQG--NRSNSQGLREIDIPYLDDK----------EFIIDISAGLRHWICVTNEGNLYGCG 170
Query: 255 FGGYGRLG 262
G G+LG
Sbjct: 171 DGRKGQLG 178
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.136 0.435 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 414 393 0.00095 117 3 11 22 0.41 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 219
No. of states in DFA: 622 (66 KB)
Total size of DFA: 281 KB (2144 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 30.60u 0.12s 30.72t Elapsed: 00:00:01
Total cpu time: 30.75u 0.12s 30.87t Elapsed: 00:00:01
Start: Fri May 10 01:15:29 2013 End: Fri May 10 01:15:30 2013
WARNINGS ISSUED: 1