BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015057
(414 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9P258|RCC2_HUMAN Protein RCC2 OS=Homo sapiens GN=RCC2 PE=1 SV=2
Length = 522
Score = 274 bits (700), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 163/425 (38%), Positives = 235/425 (55%), Gaps = 34/425 (8%)
Query: 1 MAELEAEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRP 52
+ E E K + G + G+LL G+T WD +GR++ L NL P R
Sbjct: 85 ITEPEHTKERVKLEGSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGC 144
Query: 53 LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKI 112
L GV +R V +G + H + + EG+ ++WGRNE+GQLGHGD + + P ++ LS I
Sbjct: 145 LAGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVI 204
Query: 113 KKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGA 170
A GR+HT+ +TE G+ AFG NK GQLG G+ + + PSP + + + +T ACGA
Sbjct: 205 VSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGA 263
Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
+F++ + ++ + G P+YGQLGH +D ++ + + ++ Y+ + PR +A +T
Sbjct: 264 EFSMIMDC--KGNLYSFGCPEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKT 319
Query: 231 ------------IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
+ VACG NHT+ +DS+ V++WGFGGYGRLGH EQKDE VPR V +F
Sbjct: 320 KDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLF 379
Query: 279 QRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCM 336
P I AG S + G L+ WG + + MYPK + DL GW +R +
Sbjct: 380 D----FPGRGASQIYAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSL 435
Query: 337 DSGNMHHFVGADSSCISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
G V AD S ISWG + +GELGYG + KSS ++V L+G+ VA GY H
Sbjct: 436 ACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSH 495
Query: 396 SLVIV 400
SLVI
Sbjct: 496 SLVIA 500
>sp|Q8BK67|RCC2_MOUSE Protein RCC2 OS=Mus musculus GN=Rcc2 PE=2 SV=1
Length = 520
Score = 273 bits (697), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 159/414 (38%), Positives = 231/414 (55%), Gaps = 34/414 (8%)
Query: 20 GELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCV 71
G+LL G+T WD +GR++ L NL P R L GV +R V +G + H +
Sbjct: 102 GQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSCAAHSL 161
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
+ EG+ ++WGRNE+GQLGHGD + + P ++ LS I A GR+HT+ +T+ G+
Sbjct: 162 LITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGSV 221
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASILNAGL 189
AFG NK GQLG G+ + + PSP + + + +T ACGA+F++ + ++ + G
Sbjct: 222 FAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGAEFSMLMDCK--GNLYSFGC 278
Query: 190 PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET------------IVKVACG 237
P+YGQLGH +D ++ + + ++ Y+ + PR +A +T + VACG
Sbjct: 279 PEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 336
Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSV 295
NHT+ +DS+ V++WGFGGYGRLGH EQKDE VPR V +F P I AG
Sbjct: 337 ANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FPGRGATQIYAGYT 392
Query: 296 NSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWG 355
S + G L+ WG + + MYPK + DL GW +R + G V AD S ISWG
Sbjct: 393 CSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWG 452
Query: 356 HA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGER 408
+ +GELGYG + KSS ++V L+G+ VA GY HSLVI + E+
Sbjct: 453 PSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIARDESEAEK 506
>sp|Q52KW8|RCC2_XENLA Protein RCC2 homolog OS=Xenopus laevis GN=rcc2 PE=2 SV=1
Length = 513
Score = 269 bits (688), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 160/425 (37%), Positives = 235/425 (55%), Gaps = 34/425 (8%)
Query: 1 MAELEAEKMVEEETGKEKGGELLFCGSTCWDAVGRRK--------GALDGNLVSPTRLRP 52
+ E E K + G + G+LL G+T WD +GR++ L NL P R
Sbjct: 76 VTEPEHSKEKIKLEGSKAKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGC 135
Query: 53 LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKI 112
L GV +R VA+G + H + + VEG+ ++WGRN++GQLGHGD + D P ++ L
Sbjct: 136 LTGVQVRSVASGSCAAHSLLITVEGKLWSWGRNDKGQLGHGDIKRIDVPKLIESLKGEVF 195
Query: 113 KKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGA 170
A GR+HT+ +TE+G+ AFG NK GQLG G+ + + PSP + L + +T ACGA
Sbjct: 196 VHAACGRNHTLALTENGSVYAFGENKMGQLGLGN-KTDAVPSPAQILYNGQPITKVACGA 254
Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
+F++ + ++ + G P+YGQLGH +D +Y + + ++ Y+ + R IA +T
Sbjct: 255 EFSMIMDC--KGNLYSFGCPEYGQLGHNSDGKYIAR--AQRIEYDCELIARRIAIFIEKT 310
Query: 231 ------------IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
+ +ACG NH++ +DS+ V++WGFGGYGRLGH EQ+DE VPR V +F
Sbjct: 311 KDGQILPVPNVVVRDIACGINHSLILDSQKRVFSWGFGGYGRLGHSEQRDEMVPRLVKLF 370
Query: 279 QRNNVLPPE--AVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCM 336
P A I AG+ S + G L+ WG + D MYPK + DL GW +R +
Sbjct: 371 D----FPGRGAAQIYAGATCSFAVSEMGGLFFWGATNTSRDSTMYPKAVQDLCGWKVRSL 426
Query: 337 DSGNMHHFVGADSSCISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
G V AD S ISWG + +GELGYG KSS ++V L+G++ V G H
Sbjct: 427 ACGKSSIIVAADESTISWGPSPTFGELGYGDNKAKSSTTAQEVKTLDGIYSDQVIMGNSH 486
Query: 396 SLVIV 400
+LV+
Sbjct: 487 TLVVA 491
Score = 36.6 bits (83), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Query: 313 KNNGDDWMYPKPLMDLSGWNLRCMDSGN--MHHF-VGADSSCISWGHAQYGELGYGPYGQ 369
+N G + P L+G +R + SG+ H + + SWG G+LG+G
Sbjct: 121 RNLGQNLWGPHRYGCLTGVQVRSVASGSCAAHSLLITVEGKLWSWGRNDKGQLGHGDI-- 178
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
K +PK ++ L+G + ACG H+L + + +V
Sbjct: 179 KRIDVPKLIESLKGEVFVHAACGRNHTLALTENGSV 214
>sp|Q6NYE2|RCC2_DANRE Protein RCC2 homolog OS=Danio rerio GN=rcc2 PE=2 SV=1
Length = 495
Score = 255 bits (652), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 155/426 (36%), Positives = 228/426 (53%), Gaps = 29/426 (6%)
Query: 5 EAEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGV 56
+ ++ ++ E K KG +LL G+T WD +GR++ L NL P R L V
Sbjct: 63 DVKEKIKLEVPKVKG-QLLIFGATNWDLIGRKEVPKQQAAFRNLGQNLWGPHRYGCLSDV 121
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
+ V +G + H + + EG+ ++WGRN++GQLGHGD + + P ++ L + I A
Sbjct: 122 QVSCVVSGPCAAHSLIITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEEVIVAAA 181
Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEI-EPSPVRCLVSEVTATACGADFTVW 175
GR+HT+ +TE+G FG NK GQLG G+ + + P+ ++ + ACGA+F++
Sbjct: 182 CGRNHTLALTENGTVYTFGENKLGQLGQGNQTDAVLSPATIQYNGQPIVKVACGAEFSMI 241
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI--------AALA 227
+ ++ + G P+YGQLGH +D ++ + ++ E PR AI L
Sbjct: 242 VDC--KGNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIEKTKDGQVLP 299
Query: 228 GETIV--KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
+V VACG NHT+ +DS+ V++WGFGGYGRLGH EQKDE VPR V +F P
Sbjct: 300 VPNVVARDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FP 355
Query: 286 PEAV--ISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHH 343
I G S + G L+ WG + + MYPK + DL GW +R + G
Sbjct: 356 GRGATQIYCGYQCSFALSEMGGLFFWGVTNTSRESTMYPKAVQDLCGWKIRSLACGKSSI 415
Query: 344 FVGADSSCISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
V AD S ISWG + +GELGYG KSS ++V L+G++ V GY HSLVI +
Sbjct: 416 IVAADDSTISWGPSPTFGELGYGDNKPKSSTTAQEVKTLDGVYSEQVVMGYSHSLVIARQ 475
Query: 403 TNVGER 408
E+
Sbjct: 476 DTEQEK 481
>sp|Q9VR91|HERC2_DROME Probable E3 ubiquitin-protein ligase HERC2 OS=Drosophila melanogaster
GN=HERC2 PE=1 SV=3
Length = 4912
Score = 137 bits (345), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/364 (28%), Positives = 161/364 (44%), Gaps = 67/364 (18%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
PT L L V ++ VA HC+A+ EG Y WG E G+LGHG+++ DRP +V
Sbjct: 4125 PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEH 4184
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTA 165
L+ + G +H+ +T G+ L +G ++G+LG G +++ P V L+
Sbjct: 4185 LNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAID 4244
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
ACG+ L + ++ + G YG+LG G + KL Y+ I +
Sbjct: 4245 IACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSD-------GCKLPYK-------IES 4290
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
LAG +VKV CG+ +VA+ G VYTWG G + RLGH P++V Q ++
Sbjct: 4291 LAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKII- 4349
Query: 286 PEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV 345
I+ GS++ + G++Y WG + D+
Sbjct: 4350 ---SIATGSLHCVACSDSGEVYTWG----DNDE--------------------------- 4375
Query: 346 GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
G+LG G + P+ V L+G H++ V CG H+L + + +
Sbjct: 4376 --------------GQLGDGTV--TAIQRPRLVAALQGKHIVKVTCGSAHTLAL-STSQL 4418
Query: 406 GERL 409
ERL
Sbjct: 4419 SERL 4422
Score = 119 bits (299), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 159/349 (45%), Gaps = 31/349 (8%)
Query: 34 GRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG 93
GR + N+ P +L L ++ VA H +A+ ++G+ ++WG E G+LGHG
Sbjct: 3049 GRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHG 3108
Query: 94 DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
++ D+P +V L KI+ G SH+ ++ G +G ++G+LG G +++P
Sbjct: 3109 NRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQLKP 3168
Query: 154 SPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
V L V ACG+ L+ E ++ + G +G+LG G +T
Sbjct: 3169 KLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDT------- 3221
Query: 213 AYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
P I L+G +V++ CG ++A+ G V+TWG G Y RLGH + P
Sbjct: 3222 -------PHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKP 3274
Query: 273 RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKPLMDL 328
+ + + V+ ++ G+++ GQ+Y WG + +G+ ++ KP + +
Sbjct: 3275 QPIGGLRGRRVIH----VAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVI 3330
Query: 329 SGWNLRCMDSGNMHHFVGADSSCISWG--HAQYGELGYGPYGQKSSAMP 375
+D+ ++ S I+WG +A E GP S+ P
Sbjct: 3331 G------LDAVFVNRVACGSSHSIAWGLPNASSDEEKRGPVPFSSTRDP 3373
Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 103/362 (28%), Positives = 168/362 (46%), Gaps = 42/362 (11%)
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+RLRP+ +A G S V+ D G+ Y G G+LG G P + L
Sbjct: 3017 SRLRPI------HIAGGSKSLFIVSQD--GKVYACGEGTNGRLGLGVTHNVPLPHQLPVL 3068
Query: 108 SKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVT 164
+Y +KK +G H + +T DG ++G + G+LG G+ +P V L ++
Sbjct: 3069 RQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIR 3128
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ + +SS + GL +YG+LGHG D++ +L +P+ +
Sbjct: 3129 DVACGSSHSAAISS--QGELYTWGLGEYGRLGHG--------DNTTQL------KPKLVT 3172
Query: 225 ALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
ALAG +V+VACG+ T+A+ G V++WG G +G+LG + P ++
Sbjct: 3173 ALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIG 3232
Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYMWGK-----LKNNGDDWMY-PKPLMDLSGWNLRCM 336
V+ I G+ S G+++ WGK L + GD + P+P+ L G + +
Sbjct: 3233 VVQ----IECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHV 3288
Query: 337 DSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
G +H D+ + +WG +G+ G G + P V L+ + V VACG H
Sbjct: 3289 AVGALHCLAVTDAGQVYAWGDNDHGQQGSG--NTFVNKKPALVIGLDAVFVNRVACGSSH 3346
Query: 396 SL 397
S+
Sbjct: 3347 SI 3348
Score = 105 bits (263), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 153/346 (44%), Gaps = 38/346 (10%)
Query: 74 DVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
D+ WG N++ QLG G K++ PT +S+ + G +V++DG
Sbjct: 2983 DLPCTVMVWGLNDKEQLGGLKGSKVKV--PTFSQTISRLRPIHIAGGSKSLFIVSQDGKV 3040
Query: 132 LAFGWNKHGQLGSGSIRNEIEPS--PV-RCLVSEVTATACGADFTVWLSSVEGASILNAG 188
A G +G+LG G N P PV R V + A G + L +++G + + G
Sbjct: 3041 YACGEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALAL-TLDG-KVFSWG 3098
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
+ G+LGHG + +PR + AL + I VACG++H+ A+ S+G
Sbjct: 3099 EGEDGKLGHGNRTTLD--------------KPRLVEALRAKKIRDVACGSSHSAAISSQG 3144
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQL 306
+YTWG G YGRLGH + + P+ V V+ ++ GS ++ A G +
Sbjct: 3145 ELYTWGLGEYGRLGHGDNTTQLKPKLVTALAGRRVVQ----VACGSRDAQTLALTEDGAV 3200
Query: 307 YMW-----GKLKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQY 359
+ W GKL G + P + LSG + ++ G + + +WG Y
Sbjct: 3201 FSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDY 3260
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G G + P+ + L G VI VA G H L + D V
Sbjct: 3261 YRLGHG--GDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQV 3304
Score = 102 bits (253), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 146/336 (43%), Gaps = 30/336 (8%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
Y WG N RGQLG + + PT LS + + G VT DG A G+
Sbjct: 4052 YGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYGSG 4111
Query: 140 GQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
G+LG G + P+ ++ + + A G + L++ EG + G + G+LG
Sbjct: 4112 GRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTT-EG-EVYAWGEGEDGKLG 4169
Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
HG Y+ RP+ + L G ++ +ACG+ H+ A+ + G+V TWG G
Sbjct: 4170 HGNRMSYD--------------RPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKG 4215
Query: 257 GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GK 311
YGRLGH + +D+ P+ V+ + + +G + C ++ W GK
Sbjct: 4216 RYGRLGHGDSEDQLRPKLVEALLGYRAI--DIACGSGDAQTLCITDDDNVWSWGDGDYGK 4273
Query: 312 LKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQ 369
L G D P + L+G + ++ G+ S + +WG + LG+G
Sbjct: 4274 LGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDH 4333
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
PKKV L+G +IS+A G H + D V
Sbjct: 4334 VRR--PKKVAALQGKKIISIATGSLHCVACSDSGEV 4367
Score = 79.3 bits (194), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 113/256 (44%), Gaps = 27/256 (10%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
+A C H +A+D Y+WG E +LGHGD R PT ++ L ++ ++ G S
Sbjct: 619 IAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCS 678
Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSV 179
++ +T GN L +G + +LG G+ + P+ V L V A G+ L+
Sbjct: 679 YSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALT 738
Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
+ G YG+LG+G N S + E+ PR + +V G+
Sbjct: 739 SEGLVFAWGDGDYGKLGNG-----NCNGSLQPILVESLPR-----------VQRVFAGSQ 782
Query: 240 HTVAVDSKGYVYTWGFGGYGRLGH----REQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
+VA+ S+G +YTWG LGH R + VPR V Q ++ ++
Sbjct: 783 FSVALSSEGQLYTWGKATC--LGHQLVERSVQGCSVPRLVSSLQHKRIVD----VAVSVA 836
Query: 296 NSSCTAGGGQLYMWGK 311
+ + G+++ WG+
Sbjct: 837 HCLALSSSGEVFGWGR 852
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 73/162 (45%), Gaps = 17/162 (10%)
Query: 215 EAQPRPRAIAALAGETIVKVA--CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
EA+P P + +A + + +A C H +A+DS Y+WG G RLGH + VP
Sbjct: 602 EAEPLP--MEEVAHDVFISIAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVP 659
Query: 273 RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLM 326
++ +++ V + G S+ GG L WG+ N DD P ++
Sbjct: 660 TKIAALEQHCV----QSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVV 715
Query: 327 DLSGWNLR--CMDSGNMHHF-VGADSSCISWGHAQYGELGYG 365
LS + + SG+ H + ++ +WG YG+LG G
Sbjct: 716 ALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNG 757
Score = 33.1 bits (74), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 11/101 (10%)
Query: 304 GQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMH--HFVGADSS--CISWGHAQY 359
G+LY W K + P P+ +++ ++ +G+ HF+ DS+ SWG +
Sbjct: 591 GKLYTWRLAKPEAE----PLPMEEVAH-DVFISIAGHCEGRHFLAIDSNHNAYSWGTGED 645
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
LG+G + A+P K+ LE V SV CG +S I
Sbjct: 646 HRLGHG--DTHARAVPTKIAALEQHCVQSVYCGCSYSAAIT 684
>sp|Q9FN03|UVR8_ARATH Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana GN=UVR8 PE=1
SV=1
Length = 440
Score = 134 bits (337), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 112/357 (31%), Positives = 171/357 (47%), Gaps = 33/357 (9%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
+ ++AG + H VA+ +WGR E GQLGHGD R PT +S L ++I
Sbjct: 17 VLIISAG--ASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTC 74
Query: 118 GRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVW 175
G HTV ++ G + ++GW G+LG G+ + P P++ L + ACG D
Sbjct: 75 GADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACG-DSHCL 133
Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
++EG + + G Q GQLG G +T+DS V P+ I A G I VA
Sbjct: 134 AVTMEG-EVQSWGRNQNGQLGLG-----DTEDSLV---------PQKIQAFEGIRIKMVA 178
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
G HT AV G +Y WG+G YG LG ++ D VP RV + ++++ G
Sbjct: 179 AGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKM----SMVACGWR 234
Query: 296 NSSCTAGGGQLYMWGKLK----NNGD--DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGAD 348
++ + G LY +G K +GD D + P L LS + + G H + +D
Sbjct: 235 HTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSD 294
Query: 349 SSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
WG ++G++G G + S P +V + V+ V+CG+ H+L + +R NV
Sbjct: 295 GKLYGWGWNKFGQVGVGNNLDQCS--PVQVRFPDDQKVVQVSCGWRHTLAVTERNNV 349
Score = 125 bits (315), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 132/286 (46%), Gaps = 23/286 (8%)
Query: 30 WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
W GR +L +P ++ L G+ I+ +A C HC+AV +EG +WGRN+ GQ
Sbjct: 94 WGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIA--CGDSHCLAVTMEGEVQSWGRNQNGQ 151
Query: 90 LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
LG GD P + +IK AG HT VTEDG+ +GW ++G LG G +
Sbjct: 152 LGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTD 211
Query: 150 EIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
+ P V E ++ ACG T+ +S ++ G +YGQLGHG
Sbjct: 212 RLVPERVTSTGGEKMSMVACGWRHTISVSY--SGALYTYGWSKYGQLGHGD--------- 260
Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
E P + AL+ I +++ G HT+A+ S G +Y WG+ +G++G D
Sbjct: 261 -----LEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLD 315
Query: 269 EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
+ P +V V+ +S G ++ ++ WG+ N
Sbjct: 316 QCSPVQVRFPDDQKVVQ----VSCGWRHTLAVTERNNVFAWGRGTN 357
Score = 100 bits (248), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 147/322 (45%), Gaps = 42/322 (13%)
Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACG 169
K+ AG SH+V + ++G + GQLG G + P+ + L ++ + CG
Sbjct: 16 KVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCG 75
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
AD TV S G + + G +G+LGHG ++ T P I AL G
Sbjct: 76 ADHTVAYSQ-SGMEVYSWGWGDFGRLGHGNSSDLFT--------------PLPIKALHGI 120
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
I ++ACG +H +AV +G V +WG G+LG + +D VP+++ F+ + +
Sbjct: 121 RIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRI----KM 176
Query: 290 ISAGSVNSSCTAGGGQLY--MWGKLKNNG----DDWMYPKPLMDLSGWNLRCMDSGNMHH 343
++AG+ +++ G LY WG+ N G D + P+ + G + + G H
Sbjct: 177 VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHT 236
Query: 344 F-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD- 401
V + ++G ++YG+LG+G + +P K++ L + ++ G+ H++ +
Sbjct: 237 ISVSYSGALYTYGWSKYGQLGHGDL--EDHLIPHKLEALSNSFISQISGGWRHTMALTSD 294
Query: 402 ------------RTNVGERLDQ 411
+ VG LDQ
Sbjct: 295 GKLYGWGWNKFGQVGVGNNLDQ 316
>sp|O95714|HERC2_HUMAN E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens GN=HERC2 PE=1 SV=2
Length = 4834
Score = 131 bits (329), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+PT L + V I+ VA HC+A+ EG Y+WG E G+LGHG++ DRP ++
Sbjct: 4027 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4086
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L ++ AG +H+ VT G+ +G ++G+LG ++++P V L V
Sbjct: 4087 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4146
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ L + ++ + G YG+LG G + P I
Sbjct: 4147 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4192
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+L G +VKV CG+ +VA+ G VYTWG G Y RLGH PR+V Q V+
Sbjct: 4193 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4252
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
I+ GS++ C G++Y WG
Sbjct: 4253 ----AIATGSLHCVCCTEDGEVYTWG 4274
Score = 111 bits (278), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 134/292 (45%), Gaps = 21/292 (7%)
Query: 20 GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
G++ CG +G G G + P ++ L ++ VA H A+ V+G+
Sbjct: 3011 GKVYACGEATNGRLGL--GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3068
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
++WG + G+LGH ++ D+P ++ L +I+ G SH+ +T G +G ++
Sbjct: 3069 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEY 3128
Query: 140 GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
G+LG G +++P V+ L+ V ACG+ L+ + + + G +G+LG G
Sbjct: 3129 GRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3188
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
N P+ I L G+ + ++ CG ++A+ G V+TWG G Y
Sbjct: 3189 GSEGCNI--------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3234
Query: 259 GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
RLGH P+ V+ + ++ ++ G+++ GQ+Y WG
Sbjct: 3235 FRLGHGSDVHVRKPQVVEGLRGKKIVH----VAVGALHCLAVTDSGQVYAWG 3282
Score = 108 bits (271), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 105/374 (28%), Positives = 167/374 (44%), Gaps = 38/374 (10%)
Query: 38 GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DK 95
G L G+ + P+ L +++ VA G S AV VEG+ Y G G+LG G
Sbjct: 2973 GGLKGSKIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYACGEATNGRLGLGISS 3030
Query: 96 IQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
P ++ LS Y +KK +G H +T DG ++G G+LG S N +P
Sbjct: 3031 GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKP 3090
Query: 154 SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
+ L ++ + ACG+ + L+S + GL +YG+LGHG +
Sbjct: 3091 RLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHGDNT----------- 3137
Query: 213 AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
Q +P+ + L G +++VACG+ T+A+ +G V++WG G +G+LG +
Sbjct: 3138 ---TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 3194
Query: 271 VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKP-- 324
+P+ ++ V I G+ S G ++ WGK +G D KP
Sbjct: 3195 IPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQV 3250
Query: 325 LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
+ L G + + G +H DS + +WG +G+ G G + P V LEG
Sbjct: 3251 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG--TTTVNRKPTLVQGLEG 3308
Query: 384 MHVISVACGYGHSL 397
+ VACG HS+
Sbjct: 3309 QKITRVACGSSHSV 3322
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 146/329 (44%), Gaps = 30/329 (9%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y WG N RGQLG + + PT L+ + + G VT DG A G+
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4011
Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + P+ ++ + + A G + LSS EG + + G + G
Sbjct: 4012 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4069
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG + + RPR I +L G +V VA G H+ V + G +YTW
Sbjct: 4070 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4115
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
G G YGRLGH + +D+ P+ V+ Q + V+ + +G + C ++ W
Sbjct: 4116 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--DIACGSGDAQTLCLTDDDTVWSWGDGD 4173
Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
GKL G D P + L+G + ++ G+ S + +WG Y LG+G
Sbjct: 4174 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4232
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGH 395
P++V L+G VI++A G H
Sbjct: 4233 -SDDHVRRPRQVQGLQGKKVIAIATGSLH 4260
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 159/363 (43%), Gaps = 43/363 (11%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
IR AAG S A + + + WG N++ QLG G KI+ P+ LS + +
Sbjct: 2944 IRKKAAGLES----AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQV 2997
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGAD 171
G VT +G A G +G+LG SG++ + + + V + A G
Sbjct: 2998 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGR 3057
Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
L +V+G + + G G+LGH + + +PR I AL + I
Sbjct: 3058 HATAL-TVDG-KVFSWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRI 3101
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
+ACG++H+ A+ S G +YTWG G YGRLGH + + P+ V V + V+ ++
Sbjct: 3102 RDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VA 3157
Query: 292 AGSVNSSCTA--GGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHH 343
GS ++ A G ++ W GKL G + P+ + L+G + ++ G
Sbjct: 3158 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3217
Query: 344 FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
S + +WG Y LG+G P+ V+ L G ++ VA G H L + D
Sbjct: 3218 LALTKSGVVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS 3275
Query: 403 TNV 405
V
Sbjct: 3276 GQV 3278
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 128/277 (46%), Gaps = 23/277 (8%)
Query: 39 ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
A + + ++P ++ L +I +AA H +A+ G Y+WG + G+LGHGD +
Sbjct: 476 AYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 535
Query: 99 DRPTIVSELSKYKIKK----AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
+ P ++S S + K G +++ +T +G +G +G+LG GS +E P
Sbjct: 536 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 595
Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
V L +V ACG+ L+ E + + G YG+LG G + T
Sbjct: 596 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 647
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P+ I L +VKV CG+ ++A+ G VY+WG G RLGH ++ P+
Sbjct: 648 ------PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 701
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
++ Q V+ ++AGS + +++ WG
Sbjct: 702 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 734
Score = 88.6 bits (218), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 148/338 (43%), Gaps = 34/338 (10%)
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
AV +G+ Y G G+LG G PT++ + IKK +G H + ++ +G
Sbjct: 3999 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4058
Query: 130 NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAG 188
++G + G+LG G+ P + L EV A G + +++ + G
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTWG 4116
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
+YG+LGH DS E Q +P+ + AL G +V +ACG+ T+ +
Sbjct: 4117 KGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTD 4162
Query: 247 KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
V++WG G YG+LG VP ++D V+ + GS S G +
Sbjct: 4163 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGAV 4218
Query: 307 YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
Y WGK L + DD + P+ + L G + + +G++H D +WG
Sbjct: 4219 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4278
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G V VACG H+L
Sbjct: 4279 GQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314
Score = 85.1 bits (209), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 122/271 (45%), Gaps = 34/271 (12%)
Query: 149 NEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD 207
+ + P V+ L S + A +D +L+ + + G G+LGHG
Sbjct: 480 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG--------- 530
Query: 208 SSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
+V L P+ I+A AG+ +V +ACG+ ++ A+ ++G +YTWG G YGRLGH
Sbjct: 531 DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 585
Query: 264 REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDD 318
+DE +P V + V+ + +G + GQ++ W GKL G D
Sbjct: 586 GSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD 643
Query: 319 -WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAM 374
PK L DL +RC ++ + D SWG LG+G ++
Sbjct: 644 GCKTPKLIEKLQDLDVVKVRCGSQFSIA--LTKDGQVYSWGKGDNQRLGHG--TEEHVRY 699
Query: 375 PKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
PK ++ L+G VI VA G H L + + + V
Sbjct: 700 PKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 730
Score = 82.4 bits (202), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 121/287 (42%), Gaps = 38/287 (13%)
Query: 129 GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
G+ +GW N GQLG P+P L + G + T++ + +G +
Sbjct: 3950 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG-KLYA 4008
Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
G Y E+ P + ++ I KVA G H +A+
Sbjct: 4009 TG--------------YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL 4054
Query: 245 DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
S+G VY+WG G+LGH + PR ++ + V+ ++AG +S+C G
Sbjct: 4055 SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD----VAAGGAHSACVTAAG 4110
Query: 305 QLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFVGADSSCI-S 353
LY WGK + ++ +D + PK + L G R +D SG+ D + S
Sbjct: 4111 DLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGH--RVVDIACGSGDAQTLCLTDDDTVWS 4168
Query: 354 WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
WG YG+LG G G +P K+D L G+ V+ V CG S+ +
Sbjct: 4169 WGDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4213
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 99/242 (40%), Gaps = 45/242 (18%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
N P + L IR +A C S H A+ G YTWG E G+LGHGD + +P
Sbjct: 3086 NCDKPRLIEALKTKRIRDIA--CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK 3143
Query: 103 IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
+V L +++ + G + T+ +T++G ++G G+LG G P + L
Sbjct: 3144 MVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLN 3203
Query: 161 SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN--------------- 204
+ V CGA F++ L+ + + G Y +LGHG+D
Sbjct: 3204 GQGVCQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVH 3261
Query: 205 ----------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHT 241
DS A+ +P + L G+ I +VACG++H+
Sbjct: 3262 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3321
Query: 242 VA 243
VA
Sbjct: 3322 VA 3323
Score = 65.5 bits (158), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + V C S VA+ G YTWG+ + +LGHG
Sbjct: 4179 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4235
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP V L K+ G H V TEDG +G N GQLG G+ P V
Sbjct: 4236 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4295
Query: 157 RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
L +V ACG+ T+ S+ + AS G+L EYN
Sbjct: 4296 AALQGKKVNRVACGSAHTLAWSTSKPAS--------AGKLPAQVPMEYN 4336
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D ++ P + L G I VA G + HC+AV G+ Y WG N+ GQ G+G +
Sbjct: 3242 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3299
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVT 126
PT+V L KI + G SH+V T
Sbjct: 3300 PTLVQGLEGQKITRVACGSSHSVAWT 3325
Score = 52.0 bits (123), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 86/236 (36%), Gaps = 59/236 (25%)
Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
P LA + ++AC
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAH 501
Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
+H +A+ + G VY+WG G GRLGH + P+ + F I+ GS
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561
Query: 296 NSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFV 345
S+ G+LY WG+ + +D P + L G L+ +D SG+
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTLA 619
Query: 346 GADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
++ + SWG YG+LG G G PK ++ L+ + V+ V CG S+ +
Sbjct: 620 VTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 673
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 41/261 (15%)
Query: 4 LEAEKMVEEETGKEKGGEL--LFCGSTCWDAV--------------GRRKGALDGNLVSP 47
LE K++ +GK+ G + + CGST A+ GR + P
Sbjct: 535 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 594
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+ L G+ + VA G +AV G+ ++WG + G+LG G P ++ +L
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
+ K G ++ +T+DG ++G + +LG G+ + P
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 701
Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
L ++G +++ L D+E ++ S+ + + +P P A
Sbjct: 702 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAA 754
Query: 223 IAALAGETIVKVACGTNHTVA 243
+ L + IV +ACG + A
Sbjct: 755 LPGLDTKHIVGIACGPAQSFA 775
Score = 42.0 bits (97), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 75/184 (40%), Gaps = 18/184 (9%)
Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
+G I K A G + +K V+ WG +LG + VP + NV+
Sbjct: 2940 SGSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ- 2996
Query: 287 EAVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--CMD 337
++ GS + G++Y G+ N + P+ + LS + ++ +
Sbjct: 2997 ---VAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3053
Query: 338 SGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
SG H + D SWG G+LG+ + + + P+ ++ L+ + +ACG HS
Sbjct: 3054 SGGRHATALTVDGKVFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSSHS 3111
Query: 397 LVIV 400
+
Sbjct: 3112 AALT 3115
Score = 38.9 bits (89), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 68/165 (41%), Gaps = 15/165 (9%)
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
T++ G +Y WG G+LG E VP + L P +I + T
Sbjct: 3945 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA---TLRPVQLIGGEQTLFAVT 4001
Query: 301 AGGGQLYMWG------KLKNNGDDWMYPKPLMDLSGWNLR--CMDSGNMHHF-VGADSSC 351
A G+LY G + P L + ++ ++SG H + ++
Sbjct: 4002 A-DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4060
Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
SWG A+ G+LG+G + P+ ++ L G+ V+ VA G HS
Sbjct: 4061 YSWGEAEDGKLGHG--NRSPCDRPRVIESLRGIEVVDVAAGGAHS 4103
>sp|Q4U2R1|HERC2_MOUSE E3 ubiquitin-protein ligase HERC2 OS=Mus musculus GN=Herc2 PE=1 SV=3
Length = 4836
Score = 131 bits (329), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
+PT L + V I+ VA HC+A+ EG Y+WG E G+LGHG++ DRP ++
Sbjct: 4029 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4088
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L ++ AG +H+ VT G+ +G ++G+LG ++++P V L V
Sbjct: 4089 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 4148
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
ACG+ L + ++ + G YG+LG G + P I
Sbjct: 4149 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4194
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
+L G +VKV CG+ +VA+ G VYTWG G Y RLGH PR+V Q V+
Sbjct: 4195 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4254
Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
I+ GS++ C G++Y WG
Sbjct: 4255 ----AIATGSLHCVCCTEDGEVYTWG 4276
Score = 111 bits (278), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 134/292 (45%), Gaps = 21/292 (7%)
Query: 20 GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
G++ CG +G G G + P ++ L ++ VA H A+ V+G+
Sbjct: 3012 GKVYSCGEATNGRLGL--GMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3069
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
++WG + G+LGH ++ D+P ++ L +I+ G SH+ +T G +G ++
Sbjct: 3070 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEY 3129
Query: 140 GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
G+LG G +++P V+ L+ V ACG+ L+ + + + G +G+LG G
Sbjct: 3130 GRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3189
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
N P+ I L G+ + ++ CG ++A+ G V+TWG G Y
Sbjct: 3190 GSEGCNI--------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3235
Query: 259 GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
RLGH P+ V+ + ++ ++ G+++ GQ+Y WG
Sbjct: 3236 FRLGHGSDVHVRKPQVVEGLRGKKIVH----VAVGALHCLAVTDSGQVYAWG 3283
Score = 109 bits (272), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 105/374 (28%), Positives = 168/374 (44%), Gaps = 38/374 (10%)
Query: 38 GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DK 95
G L G+ + P+ L +++ VA G S AV VEG+ Y+ G G+LG G
Sbjct: 2974 GGLKGSKIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYSCGEATNGRLGLGMSS 3031
Query: 96 IQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
P ++ LS Y +KK +G H +T DG ++G G+LG S N +P
Sbjct: 3032 GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKP 3091
Query: 154 SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
+ L ++ + ACG+ + L+S + GL +YG+LGHG +
Sbjct: 3092 RLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHGDNT----------- 3138
Query: 213 AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
Q +P+ + L G +++VACG+ T+A+ +G V++WG G +G+LG +
Sbjct: 3139 ---TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 3195
Query: 271 VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKP-- 324
+P+ ++ V I G+ S G ++ WGK +G D KP
Sbjct: 3196 IPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQV 3251
Query: 325 LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
+ L G + + G +H DS + +WG +G+ G G + P V LEG
Sbjct: 3252 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG--TTTVNRKPTLVQGLEG 3309
Query: 384 MHVISVACGYGHSL 397
+ VACG HS+
Sbjct: 3310 QKITRVACGSSHSV 3323
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 146/329 (44%), Gaps = 30/329 (9%)
Query: 77 GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
G Y WG N RGQLG + + PT L+ + + G VT DG A G+
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4013
Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
G+LG G + P+ ++ + + A G + LSS EG + + G + G
Sbjct: 4014 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4071
Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
+LGHG + + RPR I +L G +V VA G H+ V + G +YTW
Sbjct: 4072 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4117
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
G G YGRLGH + +D+ P+ V+ Q + V+ + +G + C ++ W
Sbjct: 4118 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVI--DIACGSGDAQTLCLTDDDTVWSWGDGD 4175
Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
GKL G D P + L+G + ++ G+ S + +WG Y LG+G
Sbjct: 4176 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4234
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGH 395
P++V L+G VI++A G H
Sbjct: 4235 -SDDHVRRPRQVQGLQGKKVIAIATGSLH 4262
Score = 102 bits (253), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 129/277 (46%), Gaps = 23/277 (8%)
Query: 39 ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
A + ++++P ++ L +I +AA H +A+ G Y+WG + G+LGHGD +
Sbjct: 477 AYNSDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 536
Query: 99 DRPTIVSELSKYKIKK----AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
+ P ++S S + K G +++ +T +G +G +G+LG GS +E P
Sbjct: 537 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 596
Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
V L +V ACG+ L+ E + + G YG+LG G + T
Sbjct: 597 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 648
Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
P+ I L ++KV CG+ ++A+ G VY+WG G RLGH ++ P+
Sbjct: 649 ------PKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 702
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
++ Q V+ ++AGS + +++ WG
Sbjct: 703 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 735
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 152/346 (43%), Gaps = 39/346 (11%)
Query: 75 VEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSL 132
+ + + WG N++ QLG G KI+ P+ LS + + G VT +G
Sbjct: 2958 IRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3015
Query: 133 AFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
+ G +G+LG SG++ + + + V + A G L +V+G + + G
Sbjct: 3016 SCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATAL-TVDG-KVFSWG 3073
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
G+LGH + + +PR I AL + I +ACG++H+ A+ S G
Sbjct: 3074 EGDDGKLGHFSRMNCD--------------KPRLIEALKTKRIRDIACGSSHSAALTSSG 3119
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQL 306
+YTWG G YGRLGH + + P+ V V + V+ ++ GS ++ A G +
Sbjct: 3120 ELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VACGSRDAQTLALTDEGLV 3175
Query: 307 YMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQY 359
+ W GKL G + P+ + L+G + ++ G S + +WG Y
Sbjct: 3176 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3235
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G P+ V+ L G ++ VA G H L + D V
Sbjct: 3236 FRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQV 3279
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 148/338 (43%), Gaps = 34/338 (10%)
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
AV +G+ Y G G+LG G PT++ + IKK +G H + ++ +G
Sbjct: 4001 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4060
Query: 130 NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAG 188
++G + G+LG G+ P + L EV A G + +++ + G
Sbjct: 4061 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTWG 4118
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
+YG+LGH DS E Q +P+ + AL G ++ +ACG+ T+ +
Sbjct: 4119 KGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTD 4164
Query: 247 KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
V++WG G YG+LG VP ++D V+ + GS S G +
Sbjct: 4165 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGAV 4220
Query: 307 YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
Y WGK L + DD + P+ + L G + + +G++H D +WG
Sbjct: 4221 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4280
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+LG G + P+ V L+G V VACG H+L
Sbjct: 4281 GQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4316
Score = 85.1 bits (209), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 105/226 (46%), Gaps = 33/226 (14%)
Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKG 248
G+LGHG +V L P+ I+A AG+ +V +ACG+ ++ A+ ++G
Sbjct: 526 GRLGHG---------DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEG 571
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
+YTWG G YGRLGH +DE +P V + V+ + +G + GQ++
Sbjct: 572 ELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWS 629
Query: 309 W-----GKLKNNGDD-WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQY 359
W GKL G D PK L DL +RC ++ + D SWG
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIA--LTKDGQVYSWGKGDN 687
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
LG+G ++ PK ++ L+G VI VA G H L + + + V
Sbjct: 688 QRLGHG--TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 731
Score = 82.4 bits (202), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 121/287 (42%), Gaps = 38/287 (13%)
Query: 129 GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
G+ +GW N GQLG P+P L + G + T++ + +G +
Sbjct: 3952 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG-KLYA 4010
Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
G Y E+ P + ++ I KVA G H +A+
Sbjct: 4011 TG--------------YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL 4056
Query: 245 DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
S+G VY+WG G+LGH + PR ++ + V+ ++AG +S+C G
Sbjct: 4057 SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD----VAAGGAHSACVTAAG 4112
Query: 305 QLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFVGADSSCI-S 353
LY WGK + ++ +D + PK + L G R +D SG+ D + S
Sbjct: 4113 DLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGH--RVIDIACGSGDAQTLCLTDDDTVWS 4170
Query: 354 WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
WG YG+LG G G +P K+D L G+ V+ V CG S+ +
Sbjct: 4171 WGDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4215
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 99/242 (40%), Gaps = 45/242 (18%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
N P + L IR +A C S H A+ G YTWG E G+LGHGD + +P
Sbjct: 3087 NCDKPRLIEALKTKRIRDIA--CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK 3144
Query: 103 IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
+V L +++ + G + T+ +T++G ++G G+LG G P + L
Sbjct: 3145 MVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLN 3204
Query: 161 SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN--------------- 204
+ V CGA F++ L+ + + G Y +LGHG+D
Sbjct: 3205 GQGVCQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVH 3262
Query: 205 ----------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHT 241
DS A+ +P + L G+ I +VACG++H+
Sbjct: 3263 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3322
Query: 242 VA 243
VA
Sbjct: 3323 VA 3324
Score = 65.5 bits (158), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 37 KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
+G DG V P ++ L G+ + V C S VA+ G YTWG+ + +LGHG
Sbjct: 4181 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4237
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
RP V L K+ G H V TEDG +G N GQLG G+ P V
Sbjct: 4238 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4297
Query: 157 RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
L +V ACG+ T+ S+ + AS G+L EYN
Sbjct: 4298 AALQGKKVNRVACGSAHTLAWSTSKPASA--------GKLPAQVPMEYN 4338
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
D ++ P + L G I VA G + HC+AV G+ Y WG N+ GQ G+G +
Sbjct: 3243 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3300
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVT 126
PT+V L KI + G SH+V T
Sbjct: 3301 PTLVQGLEGQKITRVACGSSHSVAWT 3326
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 87/236 (36%), Gaps = 59/236 (25%)
Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
P LA +++VAC
Sbjct: 443 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSDMLAPQLVQGLASRNIVKIAAH 502
Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
+H +A+ + G VY+WG G GRLGH + P+ + F I+ GS
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562
Query: 296 NSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFV 345
S+ G+LY WG+ + +D P + L G L+ +D SG+
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTLA 620
Query: 346 GADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
++ + SWG YG+LG G G PK ++ L+ + VI V CG S+ +
Sbjct: 621 VTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALT 674
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 41/261 (15%)
Query: 4 LEAEKMVEEETGKEKGGEL--LFCGSTCWDAV--------------GRRKGALDGNLVSP 47
LE K++ +GK+ G + + CGST A+ GR + P
Sbjct: 536 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 595
Query: 48 TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
+ L G+ + VA G +AV G+ ++WG + G+LG G P ++ +L
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
+ K G ++ +T+DG ++G + +LG G+ + P
Sbjct: 656 QDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 702
Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
L ++G +++ L D+E ++ S+ + + +P P A
Sbjct: 703 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPTA 755
Query: 223 IAALAGETIVKVACGTNHTVA 243
+ L + IV +ACG + A
Sbjct: 756 LPGLDSKHIVGIACGPAQSFA 776
Score = 40.8 bits (94), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 74/183 (40%), Gaps = 18/183 (9%)
Query: 228 GETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE 287
G I K G T + +K V+ WG +LG + VP + NV+
Sbjct: 2942 GSLIRKKTPGLESTATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ-- 2997
Query: 288 AVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--CMDS 338
++ GS + G++Y G+ N + P+ + LS + ++ + S
Sbjct: 2998 --VAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHS 3055
Query: 339 GNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G H + D SWG G+LG+ + + + P+ ++ L+ + +ACG HS
Sbjct: 3056 GGRHATALTVDGKVFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSSHSA 3113
Query: 398 VIV 400
+
Sbjct: 3114 ALT 3116
Score = 38.9 bits (89), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 68/165 (41%), Gaps = 15/165 (9%)
Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
T++ G +Y WG G+LG E VP + L P +I + T
Sbjct: 3947 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA---TLRPVQLIGGEQTLFAVT 4003
Query: 301 AGGGQLYMWG------KLKNNGDDWMYPKPLMDLSGWNLR--CMDSGNMHHF-VGADSSC 351
A G+LY G + P L + ++ ++SG H + ++
Sbjct: 4004 A-DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4062
Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
SWG A+ G+LG+G + P+ ++ L G+ V+ VA G HS
Sbjct: 4063 YSWGEAEDGKLGHG--NRSPCDRPRVIESLRGIEVVDVAAGGAHS 4105
>sp|Q6P798|RCBT2_RAT RCC1 and BTB domain-containing protein 2 OS=Rattus norvegicus
GN=Rcbtb2 PE=2 SV=1
Length = 551
Score = 121 bits (303), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 143/296 (48%), Gaps = 26/296 (8%)
Query: 21 ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
E+ G+ C +G G + + P RL L G I ++ G H V +G +
Sbjct: 66 EIFVLGTNCSGCLG--VGDIQST-IEPRRLDSLTGKKIASLSYGS-GPHIVLATTDGEVF 121
Query: 81 TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
TWG N QLG+G P I + LS ++ + G H++V+T DG A+G+N
Sbjct: 122 TWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 181
Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVT-ATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
GQ+GSGS N+ P V CL ++V + ACG ++ V+ + G GQLG
Sbjct: 182 GQVGSGSTANQPIPRRVTGCLQNKVVMSIACGQ--MCSMAVVDTGEVYVWGYNGNGQLGL 239
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
G+ QP P +AAL G + +VACG HT+ + +G +Y WG
Sbjct: 240 GSSGN--------------QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANS 285
Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
YG+LG + ++ P V V +++ ++ A SA + S+ + GG +YMWG+ +
Sbjct: 286 YGQLGTGNKSNQSYPTPV-VVEKDRIIEIAACHSAHT--SAAKSQGGHVYMWGQCR 338
Score = 85.5 bits (210), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 138/308 (44%), Gaps = 34/308 (11%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
++ SE I++A G + + T + G N G LG G I++ IEP +
Sbjct: 35 SLCSEEELQLIRQACVFGTAGNEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTIEPRRLDS 94
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + + G+ + L++ +G + G Y QLG+GT N
Sbjct: 95 LTGKKIASLSYGSGPHIVLATTDG-EVFTWGHNAYSQLGNGTTNH--------------G 139
Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P I+ L+ + +++VACG+ H++ + S G V+ WG+ G++G ++ +PRRV
Sbjct: 140 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVT 199
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSG 330
+N V+ I+ G + S G++Y+WG N G P P + L G
Sbjct: 200 GCLQNKVV---MSIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQG 256
Query: 331 WNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
++ + G H V D I +WG YG+LG G +S P ++E +I +
Sbjct: 257 IRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPV---VVEKDRIIEI 313
Query: 390 -ACGYGHS 396
AC H+
Sbjct: 314 AACHSAHT 321
>sp|Q5RCZ7|RCBT2_PONAB RCC1 and BTB domain-containing protein 2 OS=Pongo abelii GN=RCBTB2
PE=2 SV=1
Length = 551
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 140/296 (47%), Gaps = 26/296 (8%)
Query: 21 ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
E+ G+ C +G G + + P RL L G I ++ G H V EG +
Sbjct: 66 EIFVLGTNCCGCLGL--GDVQST-IEPRRLDSLNGKKIACLSYGS-GPHIVLATTEGEVF 121
Query: 81 TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
TWG N QLG+G P I + LS ++ + G H++V+T DG A+G+N
Sbjct: 122 TWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 181
Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
GQ+GSGS N+ P V CL ++V T ACG ++ V+ + G GQLG
Sbjct: 182 GQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ--MCCMAVVDTGEVYVWGYNGNGQLGL 239
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
G QP P +AAL G + +VACG HT+ + +G VY WG
Sbjct: 240 GNSGN--------------QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 285
Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
YG+LG + ++ P V V +++ ++ A S + S+ GG +YMWG+ +
Sbjct: 286 YGQLGTGNKSNQSYPTPVTV-EKDRIIEIAACHSTHT--SAAKTQGGHVYMWGQCR 338
Score = 82.4 bits (202), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 130/290 (44%), Gaps = 30/290 (10%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
++ SE I++A G+ + + T + G N G LG G +++ IEP +
Sbjct: 35 SLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDS 94
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + G+ + L++ EG + G Y QLG+GT N
Sbjct: 95 LNGKKIACLSYGSGPHIVLATTEG-EVFTWGHNAYSQLGNGTTNH--------------G 139
Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P I+ L+ + +++VACG+ H++ + S G V+ WG+ G++G ++ +PRRV
Sbjct: 140 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVT 199
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSG 330
+N V+ I+ G + G++Y+WG N G+ P P + L G
Sbjct: 200 GCLQNKVV---VTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQG 256
Query: 331 WNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVD 379
++ + G H V D + +WG YG+LG G +S P V+
Sbjct: 257 IRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVE 306
>sp|O95199|RCBT2_HUMAN RCC1 and BTB domain-containing protein 2 OS=Homo sapiens GN=RCBTB2
PE=2 SV=1
Length = 551
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 140/296 (47%), Gaps = 26/296 (8%)
Query: 21 ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
E+ G+ C +G G + + P RL L G I ++ G H V EG +
Sbjct: 66 EIFVLGTNCCGCLGL--GDVQST-IEPRRLDSLNGKKIACLSYGS-GPHIVLATTEGEVF 121
Query: 81 TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
TWG N QLG+G P I + LS ++ + G H++V+T DG A+G+N
Sbjct: 122 TWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 181
Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
GQ+GSGS N+ P V CL ++V T ACG ++ V+ + G GQLG
Sbjct: 182 GQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ--MCCMAVVDTGEVYVWGYNGNGQLGL 239
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
G QP P +AAL G + +VACG HT+ + +G VY WG
Sbjct: 240 GNSGN--------------QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 285
Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
YG+LG + ++ P V V +++ ++ A S + S+ GG +YMWG+ +
Sbjct: 286 YGQLGTGNKSNQSYPTPVTV-EKDRIIEIAACHSTHT--SAAKTQGGHVYMWGQCR 338
Score = 82.4 bits (202), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 130/290 (44%), Gaps = 30/290 (10%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
++ SE I++A G+ + + T + G N G LG G +++ IEP +
Sbjct: 35 SLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDS 94
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + G+ + L++ EG + G Y QLG+GT N
Sbjct: 95 LNGKKIACLSYGSGPHIVLATTEG-EVFTWGHNAYSQLGNGTTNH--------------G 139
Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P I+ L+ + +++VACG+ H++ + S G V+ WG+ G++G ++ +PRRV
Sbjct: 140 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVT 199
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSG 330
+N V+ I+ G + G++Y+WG N G+ P P + L G
Sbjct: 200 GCLQNKVV---VTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQG 256
Query: 331 WNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVD 379
++ + G H V D + +WG YG+LG G +S P V+
Sbjct: 257 IRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVE 306
>sp|Q99LJ7|RCBT2_MOUSE RCC1 and BTB domain-containing protein 2 OS=Mus musculus GN=Rcbtb2
PE=2 SV=1
Length = 551
Score = 120 bits (300), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 141/296 (47%), Gaps = 26/296 (8%)
Query: 21 ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
E+ G+ C +G G + + P RL L G I ++ G H V +G +
Sbjct: 66 EIFVLGTNCSGCLG--VGDIQST-IEPRRLDSLTGKKIASLSYGS-GPHIVLATTDGEVF 121
Query: 81 TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
TWG N QLG+G P I + LS ++ + G H++V+T DG A+G+N
Sbjct: 122 TWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 181
Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
GQ+GSGS N+ P V CL ++V ACG ++ V+ + G GQLG
Sbjct: 182 GQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQ--MCSMAVVDTGEVYVWGYNGNGQLGL 239
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
G+ QP P +AAL G + +VACG HT+ + +G +Y WG
Sbjct: 240 GSSGN--------------QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANS 285
Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
YG+LG + ++ P V V +++ ++ A SA + S+ GG +YMWG+ +
Sbjct: 286 YGQLGTGNKSNQSYPTPV-VVEKDRIIEIAACHSAHT--SAAKTQGGHVYMWGQCR 338
Score = 85.1 bits (209), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 139/308 (45%), Gaps = 34/308 (11%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
++ SE I++A G+ + + T + G N G LG G I++ IEP +
Sbjct: 35 SLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTIEPRRLDS 94
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + + G+ + L++ +G + G Y QLG+GT N
Sbjct: 95 LTGKKIASLSYGSGPHIVLATTDG-EVFTWGHNAYSQLGNGTTNH--------------G 139
Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P I+ L+ + +++VACG+ H++ + S G V+ WG+ G++G ++ +PRRV
Sbjct: 140 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVT 199
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSG 330
+N V+ I+ G + S G++Y+WG N G P P + L G
Sbjct: 200 GCLQNKVVMN---IACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQG 256
Query: 331 WNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
++ + G H V D I +WG YG+LG G +S P ++E +I +
Sbjct: 257 IRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPV---VVEKDRIIEI 313
Query: 390 -ACGYGHS 396
AC H+
Sbjct: 314 AACHSAHT 321
>sp|Q6NXM2|RCBT1_MOUSE RCC1 and BTB domain-containing protein 1 OS=Mus musculus GN=Rcbtb1
PE=2 SV=1
Length = 531
Score = 105 bits (262), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 126/274 (45%), Gaps = 31/274 (11%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-IVS 105
P +L L G I+ ++ G H + +G Y WG N QLG+G Q P + +
Sbjct: 65 PKKLEALCGKKIKSLSYGS-GPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCT 123
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCL-VSEV 163
L ++ + G H++ + DG A+G+N GQ+GSGS N+ P V CL V
Sbjct: 124 NLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRV 183
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
ACG T ++ ++ + G GQLG G + Q P +
Sbjct: 184 VNIACGQ--TSSMAVLDSGEVYGWGYNGNGQLGLGNNGN--------------QLTPVRV 227
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
AAL G + ++ CG HT+A+ +G +Y WG YG+LG + + P ++ +
Sbjct: 228 AALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQI-------M 280
Query: 284 LPPEAVISAGSVNSSCTAG----GGQLYMWGKLK 313
+ E VI + +S+ T+ GG +YMWG+ +
Sbjct: 281 VEKERVIEIAACHSTHTSAAKTQGGHVYMWGQCR 314
Score = 78.6 bits (192), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 139/310 (44%), Gaps = 38/310 (12%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
T++S I+KA G + + VT++ FG N LG+G ++ + P +
Sbjct: 11 TLLSPQEAGSIRKACVFGTSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEA 70
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + + G+ V L++ +G + G Y QLG+GT N +
Sbjct: 71 LCGKKIKSLSYGSGPHVLLTTEDGV-VYAWGHNGYSQLGNGTTN-------------QGI 116
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
+ L + +++VACG++H++A+ + G ++ WG+ G++G ++ PR+V
Sbjct: 117 APVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKV-- 174
Query: 278 FQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
N L + V I+ G +S G++Y WG L NNG+ + P + L
Sbjct: 175 ---TNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQ-LTPVRVAAL 230
Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
G + + G H D + +WG YG+LG G K++ + ++E VI
Sbjct: 231 HGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGSKNNLLSPTQIMVEKERVI 287
Query: 388 SV-ACGYGHS 396
+ AC H+
Sbjct: 288 EIAACHSTHT 297
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
+GN ++P R+ L G+ + + G H +A+ EG Y WG N GQLG G K
Sbjct: 218 NGNQLTPVRVAALHGMCVNQIVCG--YAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLS 275
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDG 129
PT + + I+ A +HT G
Sbjct: 276 PTQIMVEKERVIEIAACHSTHTSAAKTQG 304
>sp|Q8NDN9|RCBT1_HUMAN RCC1 and BTB domain-containing protein 1 OS=Homo sapiens GN=RCBTB1
PE=2 SV=1
Length = 531
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 125/270 (46%), Gaps = 23/270 (8%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-IVS 105
P +L L G I+ ++ G H + +G Y WG N QLG+G Q P + +
Sbjct: 65 PKKLEGLCGKKIKSLSYGS-GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCT 123
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCL-VSEV 163
L ++ + G H++ + DG A+G+N GQ+GSGS N+ P V CL + V
Sbjct: 124 NLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRV 183
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
ACG T ++ ++ + G GQLG G + Q P +
Sbjct: 184 VGIACGQ--TSSMAVLDNGEVYGWGYNGNGQLGLGNNGN--------------QLTPVRV 227
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
AAL + ++ CG HT+A+ +G +Y WG YG+LG + + P + V ++ V
Sbjct: 228 AALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV-EKERV 286
Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
+ A SA + S+ GG +YMWG+ +
Sbjct: 287 VEIAACHSAHT--SAAKTQGGHVYMWGQCR 314
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 138/310 (44%), Gaps = 38/310 (12%)
Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
T++S I+KA G S + VT++ FG N LG+G ++ + P +
Sbjct: 11 TLLSPQEIASIRKACVFGTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEG 70
Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
L ++ + + G+ V LS+ +G + G Y QLG+GT N+
Sbjct: 71 LCGKKIKSLSYGSGPHVLLSTEDGV-VYAWGHNGYSQLGNGTTNQ-------------GI 116
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
+ L + +V+VACG++H++A+ + G V+ WG+ G++G ++ PR+V
Sbjct: 117 APVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKV-- 174
Query: 278 FQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
N L + V I+ G +S G++Y WG L NNG+ + P + L
Sbjct: 175 ---TNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ-LTPVRVAAL 230
Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
+ + G H D + +WG YG+LG G K++ + ++E V+
Sbjct: 231 HSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGNKNNLLSPAHIMVEKERVV 287
Query: 388 SV-ACGYGHS 396
+ AC H+
Sbjct: 288 EIAACHSAHT 297
Score = 42.0 bits (97), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 2/89 (2%)
Query: 41 DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
+GN ++P R+ L V + + G H +A+ EG Y WG N GQLG G+K
Sbjct: 218 NGNQLTPVRVAALHSVCVNQIVCG--YAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDG 129
P + + ++ A +HT G
Sbjct: 276 PAHIMVEKERVVEIAACHSAHTSAAKTQG 304
>sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens GN=HERC1
PE=1 SV=2
Length = 4861
Score = 102 bits (254), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 153/334 (45%), Gaps = 30/334 (8%)
Query: 17 EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSC-HCVAVDV 75
+ G +L CG + +G +G D +L T + L G + + C S H +A+
Sbjct: 4043 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4099
Query: 76 EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G ++WG + G+LGHG+ ++ RP + L ++ + G H+ VVT DG FG
Sbjct: 4100 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4159
Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
+G+LG G+ N+ P V L ++ ACG + T+ +S+ +G+ + G YG+
Sbjct: 4160 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSMVWAFGDGDYGK 4218
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LG G A+ P+ I L G I KVACGT +VA+ G+VYT+G
Sbjct: 4219 LGLGNST--------------AKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4264
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
L ++ P+++ V V+ + ++ G+ ++ A G +Y WG
Sbjct: 4265 QDRLIGLPEGRARNHNRPQQIPVLA--GVIIED--VAVGAEHTLALASNGDVYAWGSNSE 4320
Query: 315 ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
+ + P + L G N+R + +G H
Sbjct: 4321 GQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCH 4354
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 138/331 (41%), Gaps = 77/331 (23%)
Query: 77 GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
G+C Y WG GQL R+ + S + ++ G++ T V+ +G LA
Sbjct: 3995 GKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 4051
Query: 135 GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
G +G+LG G+ + S ++ V T+CG+D ++ E + + G
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4110
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
YG+LGHG + Q RPR I AL GE +V+++CG H+ V S G ++
Sbjct: 4111 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4156
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
T+G G YGRLG ++ +P RV
Sbjct: 4157 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4182
Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
L G+ + + G H V AD S + ++G YG+LG G
Sbjct: 4183 ----------------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 4226
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
KSS P+K+D+L G+ + VACG S+ +
Sbjct: 4227 KSS--PQKIDVLCGIGIKKVACGTQFSVALT 4255
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 136/331 (41%), Gaps = 70/331 (21%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
H +A EG ++WG + G+LGHG+ + P ++ L + AG H+ VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
DG +G G+LG G + P+ V+ +S V +CG+ T+ LS +G ++ +
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586
Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G G+LGHG N +P+ I AL G I KV G+ ++A+ S
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 632
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
G VY WG G A + GS S TA
Sbjct: 633 GQVYAWGCG-------------------------------ACLGCGS--SEATA------ 653
Query: 308 MWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGP 366
+ PK + +L+ + + G+ H + D+ +WG+ G+ G G
Sbjct: 654 ------------LRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG- 700
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
PKKV L+G+ + ++ G HSL
Sbjct: 701 NSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731
Score = 82.4 bits (202), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 97/214 (45%), Gaps = 23/214 (10%)
Query: 52 PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
PL G + V+AG H AV +G YTWG + G+LGHGD R+ PT+V ++S
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562
Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
+ + G SHT+ +++DG ++ +FG +G+LG G +P + L C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
+ ++ L+S G LG G+ RP+ I LA
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
IV V+ G +H +A+ VY WG G+ G
Sbjct: 666 RIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 122/288 (42%), Gaps = 25/288 (8%)
Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
+V+E +G N QL G+ ++P T A + ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423
Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
+ G YG+LG G N +T KL +E + +++ G HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472
Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
++G V++WG G YG+LGH + P+ + + V+ +SAG +S+
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529
Query: 304 GQLYMWGK----LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHA 357
G+LY WG+ +GD P + N+ + G+ H + D + S+G
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGG 589
Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
G+LG+G + PK ++ L+GM + V G SL + V
Sbjct: 590 DNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLALTSTGQV 635
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P ++ L GV I VA G H +A+ G Y WG N GQLG G PT+V+
Sbjct: 4282 PQQIPVLAGVIIEDVAVGAE--HTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG 4339
Query: 107 LSKYKIKKAGAGRSHTVVVT 126
L +++ AGR H+ T
Sbjct: 4340 LQGKNVRQISAGRCHSAAWT 4359
Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 26 GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
G T W G G L D N V P + L G+ IR V AG S +A+ G+ Y
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LALTSTGQVYA 637
Query: 82 WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
WG LG G + RP ++ EL+ +I G SH + ++ D A+G N G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 141 QLGSGS 146
Q G G+
Sbjct: 696 QCGQGN 701
>sp|Q6PAV2|HERC4_MOUSE Probable E3 ubiquitin-protein ligase HERC4 OS=Mus musculus GN=Herc4
PE=2 SV=2
Length = 1057
Score = 99.0 bits (245), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 150/352 (42%), Gaps = 36/352 (10%)
Query: 38 GALDGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
G +D +V P R V +R V GC H V V +G YT G N+ GQLGH +
Sbjct: 15 GGIDEEIVLEPRRSDFFVNKKVRDV--GCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EK 70
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSP 155
R +P V L I G +HT+ + + G A+G + GQLG GS P
Sbjct: 71 SRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRN 130
Query: 156 VRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
++ L ++ ACG ++ LS + + + G +YGQLG G D
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALS--KASEVFCWGQNKYGQLGLGIDC------------- 175
Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
+ Q P+ I +L G ++VA G H+ + G ++ WG +G+LG ++ D +VP
Sbjct: 176 QKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNL 235
Query: 275 VDVFQRNNVL-------PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMD 327
+ + ++ A+ G V + G GQL N+ + P+ + +
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG-----HNSTSHEINPRKVFE 290
Query: 328 LSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
L G + + G H FV + S+G G+LG G + S K
Sbjct: 291 LMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 92.8 bits (229), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 141/334 (42%), Gaps = 42/334 (12%)
Query: 82 WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
WG GQLG G D+ P K++ G G HTV V +DG G N
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
GQLG R +P V L ++ + A ACG T+ L+ + + GL GQLG
Sbjct: 64 GQLGHEKSRK--KPEQVVALDAQNIVAVACGEAHTLALN--DKGQVYAWGLDSDGQLG-- 117
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
++ + E PR I +L+ IV+VACG H++A+ V+ WG Y
Sbjct: 118 -----------LQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 259 GRLG-----HREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
G+LG ++ + + + + P ++AG +S G ++ WG+ K
Sbjct: 167 GQLGLGIDCQKQTSPQLIKSLLGI--------PFMQVAAGGAHSFVLTLSGAIFGWGRNK 218
Query: 314 ------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGP 366
N+ +D P L L + + G H + + ++G YG+LG+
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+ + P+KV L G V VACG H+ V
Sbjct: 279 TSHEIN--PRKVFELMGSIVTQVACGRQHTSAFV 310
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 75/214 (35%), Gaps = 64/214 (29%)
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
YGQLG G +E E PR + + V CG HTV V G VY
Sbjct: 9 YGQLGLGGIDE------------EIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
T G G+LGH + + + PE V++ + N A G
Sbjct: 57 TCGCNDLGQLGHEKSRKK----------------PEQVVALDAQNIVAVACG-------- 92
Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKS 371
L D G ++ +WG G+LG ++
Sbjct: 93 -----------------EAHTLALNDKGQVY----------AWGLDSDGQLGLQG-SEEC 124
Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
+P+ + L + ++ VACGY HSL + + V
Sbjct: 125 IRVPRNIKSLSDIQIVQVACGYYHSLALSKASEV 158
Score = 38.5 bits (88), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 27/50 (54%)
Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
+ WG+A YG+LG G ++ P++ D V V CG H++ ++D
Sbjct: 2 LCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLD 51
>sp|Q5PQN1|HERC4_RAT Probable E3 ubiquitin-protein ligase HERC4 OS=Rattus norvegicus
GN=Herc4 PE=2 SV=1
Length = 1057
Score = 98.2 bits (243), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 116/236 (49%), Gaps = 26/236 (11%)
Query: 48 TRLRP--LVGVDIR-FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG-HGDKIQRDRPTI 103
+R +P +V +D + VA C H +A++ +G+ Y WG + GQLG G + P
Sbjct: 71 SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRN 130
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCL--V 160
+ LS +I + G H++ +++ +G NK+GQLG G + + P ++ L +
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGI 190
Query: 161 SEVTATACGA-DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
+ A GA F + LS +I G ++GQLG +N+
Sbjct: 191 PFMQVAAGGAHSFVLTLS----GAIFGWGRNKFGQLGLNDENDRYV-------------- 232
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
P + +L + IV + CG +HT A+ +G V+T+G GGYG+LGH E PR+V
Sbjct: 233 PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 96.3 bits (238), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 150/352 (42%), Gaps = 36/352 (10%)
Query: 38 GALDGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
G +D +V P + V +R V GC H V V +G YT G N+ GQLGH +
Sbjct: 15 GGIDEEIVLEPRKSDFFVNKKVRDV--GCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EK 70
Query: 97 QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSP 155
R +P V L I G +HT+ + + G A+G + GQLG GS P
Sbjct: 71 SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRN 130
Query: 156 VRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
++ L ++ ACG ++ LS + + + G +YGQLG G +
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALS--KASEVFCWGQNKYGQLGLGIEC------------- 175
Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
+ Q P+ I +L G ++VA G H+ + G ++ WG +G+LG ++ D +VP
Sbjct: 176 QKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNL 235
Query: 275 VDVFQRNNVL-------PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMD 327
+ + ++ A+ G V + G GQL N+ + P+ + +
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG-----HNSTSHEINPRKVFE 290
Query: 328 LSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
L G + + G H FV + S+G G+LG G + S K
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 92.8 bits (229), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 144/330 (43%), Gaps = 34/330 (10%)
Query: 82 WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
WG GQLG G D+ P K++ G G HTV V +DG G N
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
GQLG R +P V L ++ + A +CG T+ L+ + + GL GQLG
Sbjct: 64 GQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLDSDGQLG-- 117
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
++ + E PR I +L+ IV+VACG H++A+ V+ WG Y
Sbjct: 118 -----------LQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 259 GRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
G+LG E + + P+ + ++ + P ++AG +S G ++ WG+ K
Sbjct: 167 GQLGLGIECQKQTSPQLI----KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQL 222
Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQK 370
N+ +D P L L + + G H + + ++G YG+LG+ +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282
Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+ P+KV L G V +ACG H+ V
Sbjct: 283 IN--PRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 48.9 bits (115), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 75/214 (35%), Gaps = 64/214 (29%)
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
YGQLG G +E E PR + + V CG HTV V G VY
Sbjct: 9 YGQLGLGGIDE------------EIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
T G G+LGH + + + PE V++ + N + G
Sbjct: 57 TCGCNDLGQLGHEKSRKK----------------PEQVVALDAQNIVAVSCG-------- 92
Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKS 371
L D G ++ +WG G+LG ++
Sbjct: 93 -----------------EAHTLALNDKGQVY----------AWGLDSDGQLGLQG-SEEC 124
Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
+P+ + L + ++ VACGY HSL + + V
Sbjct: 125 IRVPRNIKSLSDIQIVQVACGYYHSLALSKASEV 158
Score = 39.3 bits (90), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
+ WG+A YG+LG G ++ P+K D V V CG H++ ++D
Sbjct: 2 LCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLD 51
>sp|Q9UII4|HERC5_HUMAN E3 ISG15--protein ligase HERC5 OS=Homo sapiens GN=HERC5 PE=1 SV=2
Length = 1024
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 128/262 (48%), Gaps = 25/262 (9%)
Query: 59 RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI-QRDRPTIVSELSKYKIKKAGA 117
+ + C H +A+ G + WG+N GQLG G K P IV L+ + + A
Sbjct: 139 KIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISA 198
Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWL 176
G +H++ ++ GN ++G N+ GQLG G ++ +PS + L ++ V ACG + L
Sbjct: 199 GEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALL 258
Query: 177 SSVEGASILNAGLPQYGQLGHG-TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
+ + + G ++GQLGH T NE RP +A L G + ++A
Sbjct: 259 T--QDGLLFTFGAGKHGQLGHNSTQNEL---------------RPCLVAELVGYRVTQIA 301
Query: 236 CGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
CG HT+A V G V+++G G G+LG+ +D+ +P V V + L E+ S
Sbjct: 302 CGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKV-SSSEELKLESHTSEKE 360
Query: 295 VNSSCTAGGGQ-LYMWGKLKNN 315
+ AGG Q + +W K +N+
Sbjct: 361 L--IMIAGGNQSILLWIKKENS 380
Score = 96.3 bits (238), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 109/221 (49%), Gaps = 19/221 (8%)
Query: 18 KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
KGGEL G +G G + +P + L GV + ++AG H +A+ + G
Sbjct: 155 KGGELFAWGQNLHGQLGV--GRKFPSTTTPQIVEHLAGVPLAQISAG--EAHSMALSMSG 210
Query: 78 RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
Y+WG+NE GQLG G +D P+++ L K++ G SH+ ++T+DG FG
Sbjct: 211 NIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAG 270
Query: 138 KHGQLGSGSIRNEIEPSPVRCLVSE-----VTATACGADFTVWLSSVEGASILNAGLPQY 192
KHGQLG S +NE+ P CLV+E VT ACG T+ S G + + G +
Sbjct: 271 KHGQLGHNSTQNELRP----CLVAELVGYRVTQIACGRWHTLAYVSDLG-KVFSFGSGKD 325
Query: 193 GQLGHGTDNEYNTK-----DSSVKLAYEAQPRPRAIAALAG 228
GQLG+G + SS +L E+ + + +AG
Sbjct: 326 GQLGNGGTRDQLMPLPVKVSSSEELKLESHTSEKELIMIAG 366
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 113/280 (40%), Gaps = 43/280 (15%)
Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGA 170
KI G H ++++ DG + L SI E ++ CG
Sbjct: 98 KIHSVDQGAEHMLILSSDGKPFEYDNYSMKHLRFESILQE----------KKIIQITCGD 147
Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
++ LS +G + G +GQLG G + + P+ + LAG
Sbjct: 148 YHSLALS--KGGELFAWGQNLHGQLGVGR-------------KFPSTTTPQIVEHLAGVP 192
Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGR--LGHREQKDEWVPRRVDVFQRNNVLPPEA 288
+ +++ G H++A+ G +Y+WG G+ LGH E KD+ P ++ V
Sbjct: 193 LAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDD--PSLIEGLDNQKV----E 246
Query: 289 VISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
++ G +S+ G L+ +G K N+ + + P + +L G+ + + G H
Sbjct: 247 FVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWH 306
Query: 343 H--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
+V S+G + G+LG G G + MP V +
Sbjct: 307 TLAYVSDLGKVFSFGSGKDGQLGNG--GTRDQLMPLPVKV 344
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 76/169 (44%), Gaps = 16/169 (9%)
Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCLVSEV 163
S L + KI + G H++ +++ G A+G N HGQLG G + P V L
Sbjct: 133 SILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVP 192
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
A + S+ G +I + G + GQLG G E++ P I
Sbjct: 193 LAQISAGEAHSMALSMSG-NIYSWGKNECGQLGLGHT--------------ESKDDPSLI 237
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
L + + VACG +H+ + G ++T+G G +G+LGH ++E P
Sbjct: 238 EGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRP 286
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 84/191 (43%), Gaps = 20/191 (10%)
Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH-REQKDEWVPRRVDVFQ 279
R + L + I+++ CG H++A+ G ++ WG +G+LG R+ P+ V+
Sbjct: 130 RFESILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLA 189
Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---------NNGDDWMYPKPLMDLSG 330
P A ISAG +S + G +Y WGK + + DD P + L
Sbjct: 190 G----VPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDD---PSLIEGLDN 242
Query: 331 WNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
+ + G H + D ++G ++G+LG+ ++ P V L G V +
Sbjct: 243 QKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHN--STQNELRPCLVAELVGYRVTQI 300
Query: 390 ACGYGHSLVIV 400
ACG H+L V
Sbjct: 301 ACGRWHTLAYV 311
>sp|Q5GLZ8|HERC4_HUMAN Probable E3 ubiquitin-protein ligase HERC4 OS=Homo sapiens GN=HERC4
PE=1 SV=1
Length = 1057
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 117/236 (49%), Gaps = 26/236 (11%)
Query: 48 TRLRP--LVGVDIR-FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTI 103
+R +P +V +D + VA C H +A++ +G+ Y WG + GQLG + R P
Sbjct: 71 SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRN 130
Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSPVRCL--V 160
+ LS +I + G H++ +++ +G NK+GQLG G+ + + P ++ L +
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGI 190
Query: 161 SEVTATACGA-DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
+ A GA F + LS +I G ++GQLG +N+
Sbjct: 191 PFMQVAAGGAHSFVLTLS----GAIFGWGRNKFGQLGLNDENDRYV-------------- 232
Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
P + +L + IV + CG +HT A+ +G V+T+G GGYG+LGH E PR+V
Sbjct: 233 PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 149/351 (42%), Gaps = 34/351 (9%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G +D +V R ++ R GC H V V +G YT G N+ GQLGH +
Sbjct: 15 GGIDEEIVLEPRKSDFF-INKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSPV 156
R +P V L I G +HT+ + + G A+G + GQLG GS P +
Sbjct: 72 RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNI 131
Query: 157 RCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
+ L ++ ACG ++ LS + + + G +YGQLG GTD +
Sbjct: 132 KSLSDIQIVQVACGYYHSLALS--KASEVFCWGQNKYGQLGLGTD-------------CK 176
Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
Q P+ + +L G ++VA G H+ + G ++ WG +G+LG ++ D +VP +
Sbjct: 177 KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236
Query: 276 DVFQRNNVL-------PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDL 328
+ ++ A+ G V + G GQL N+ + P+ + +L
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG-----HNSTSHEINPRKVFEL 291
Query: 329 SGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
G + + G H FV + S+G G+LG G + S K
Sbjct: 292 MGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 89.7 bits (221), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 144/330 (43%), Gaps = 34/330 (10%)
Query: 82 WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
WG GQLG G D+ P +++ G G HTV V +DG G N
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
GQLG R +P V L ++ + A +CG T+ L+ + + GL GQLG
Sbjct: 64 GQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLDSDGQLGLV 119
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
E +++ PR I +L+ IV+VACG H++A+ V+ WG Y
Sbjct: 120 GSEE------CIRV-------PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 259 GRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
G+LG + K + P+ + ++ + P ++AG +S G ++ WG+ K
Sbjct: 167 GQLGLGTDCKKQTSPQLL----KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQL 222
Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQK 370
N+ +D P L L + + G H + + ++G YG+LG+ +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282
Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+ P+KV L G V +ACG H+ V
Sbjct: 283 IN--PRKVFELMGSIVTEIACGRQHTSAFV 310
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 75/214 (35%), Gaps = 64/214 (29%)
Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
+GQLG G +E E PR + + V CG HTV V G VY
Sbjct: 9 FGQLGLGGIDE------------EIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVY 56
Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
T G G+LGH + + + PE V++ + N + G
Sbjct: 57 TCGCNDLGQLGHEKSRKK----------------PEQVVALDAQNIVAVSCG-------- 92
Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKS 371
L D G ++ +WG G+LG ++
Sbjct: 93 -----------------EAHTLALNDKGQVY----------AWGLDSDGQLGLVG-SEEC 124
Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
+P+ + L + ++ VACGY HSL + + V
Sbjct: 125 IRVPRNIKSLSDIQIVQVACGYYHSLALSKASEV 158
Score = 38.1 bits (87), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 27/50 (54%)
Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
+ WG+A +G+LG G ++ P+K D V V CG H++ ++D
Sbjct: 2 LCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLD 51
>sp|Q3MHW0|SRGEF_BOVIN Secretion-regulating guanine nucleotide exchange factor OS=Bos
taurus GN=SERGEF PE=2 SV=1
Length = 464
Score = 96.3 bits (238), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 101/371 (27%), Positives = 149/371 (40%), Gaps = 73/371 (19%)
Query: 72 AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK-IKKAGAGRSHTVVVTEDGN 130
AV + WG N GQLG G K +S+ K IK+ G H+ VVT++G+
Sbjct: 10 AVPTAAALFAWGANSYGQLGLGHKEDVLSAQQLSDFCKSGCIKRITGGGGHSAVVTDEGS 69
Query: 131 SLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGL 189
G NK GQLG G + +P + L+ + ACG DFT+ L+ E +L+ G
Sbjct: 70 LFVCGLNKDGQLGLGHTEEVLYFTPCKSLLGCAIQQVACGWDFTIILT--ENGQVLSCGS 127
Query: 190 PQYGQLG--HGTDNEYNTKDSSVKLAYEAQPR----PRAIAALAGETIVKVACGTNHTVA 243
+GQLG HG PR P+AI L E +V +A G H +A
Sbjct: 128 NSFGQLGVPHG-------------------PRRCVIPQAIELLR-EKVVSIAAGLRHALA 167
Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE----AVISAGSVNSSC 299
+ G V+ WG G G R + +P + + + V E + AGS +S+
Sbjct: 168 ATASGTVFQWGT-GLASSGRRLCPGQTLPLFLTAKEPSTVTGLENSQAVCVLAGSDHSAS 226
Query: 300 TAGGGQLYMW-----GKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNM-------HHFVGA 347
G+LY+W G+L + + P+ + RC + + H V
Sbjct: 227 LTDAGELYVWGSNKHGQLASQAAFLLLPQRI------EARCFQNEKIAAVWSGWTHLVAQ 280
Query: 348 DSS--CISWGHAQYGELGYG----------------PYGQKSSAMPKKVDILEGMHVISV 389
+ +WG A YG+LG P P + L G IS
Sbjct: 281 TVTGKVFTWGRADYGQLGRTVETREGWESEKQDPSLPGSGPQKGTPSCLPCLTGATEIS- 339
Query: 390 ACGYGHSLVIV 400
CG H+L ++
Sbjct: 340 -CGSEHNLAVI 349
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 117/273 (42%), Gaps = 27/273 (9%)
Query: 18 KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
+ G++L CGS + +G G V P + L+ + +AAG H +A G
Sbjct: 118 ENGQVLSCGSNSFGQLGVPHGPR--RCVIPQAIE-LLREKVVSIAAGLR--HALAATASG 172
Query: 78 RCYTWGR---NERGQLGHGDKI----QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGN 130
+ WG + +L G + P+ V+ L + AG H+ +T+ G
Sbjct: 173 TVFQWGTGLASSGRRLCPGQTLPLFLTAKEPSTVTGLENSQAVCVLAGSDHSASLTDAGE 232
Query: 131 SLAFGWNKHGQLGSGS----IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
+G NKHGQL S + + IE RC +E A A + +T ++ +
Sbjct: 233 LYVWGSNKHGQLASQAAFLLLPQRIE---ARCFQNEKIA-AVWSGWTHLVAQTVTGKVFT 288
Query: 187 AGLPQYGQLGHGTDN----EYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTV 242
G YGQLG + E +D S+ + + P + L G T +++CG+ H +
Sbjct: 289 WGRADYGQLGRTVETREGWESEKQDPSLPGSGPQKGTPSCLPCLTGAT--EISCGSEHNL 346
Query: 243 AVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
AV G ++WG+ +G G + D W P+ V
Sbjct: 347 AVIG-GVCHSWGWNEHGMCGDGTEADVWAPKPV 378
>sp|Q4R828|RCCD1_MACFA RCC1 domain-containing protein 1 OS=Macaca fascicularis GN=RCCD1
PE=2 SV=1
Length = 376
Score = 95.5 bits (236), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 99/232 (42%), Gaps = 30/232 (12%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
P RPL ++R + H + +D G+ ++WG GQLGHG P ++
Sbjct: 148 PPFYRPLA-PELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEA 206
Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT 166
L + + AG H+V V+E G+ +GWN+ GQL P R L +
Sbjct: 207 LQGLTMAEVAAGGWHSVCVSETGDIYIWGWNESGQLAL----------PTRNLAEDGETV 256
Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
A A+ LN Q + G +D + QP P +
Sbjct: 257 A------------REATGLNEDGSQVKRTG-------RVEDGAPAPFIAVQPFPALLDLP 297
Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
G VKV+CG+ HT V G +YTWG+G YG+LGH + PRRV+ F
Sbjct: 298 LGSDAVKVSCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDWPRRVEYF 349
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 5/94 (5%)
Query: 218 PRPRAIAALAGETIVK-VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
PRP LA E + + G H + +D+ G V++WG G +G+LGH + E PR ++
Sbjct: 146 PRPPFYRPLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLE 205
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
Q + A ++AG +S C + G +Y+WG
Sbjct: 206 ALQGLTM----AEVAAGGWHSVCVSETGDIYIWG 235
Score = 37.4 bits (85), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 31/74 (41%), Gaps = 3/74 (4%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL--SKYKIKKAGAG 118
V C S H V G YTWG + GQLGH D D P V + ++K G
Sbjct: 303 VKVSCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDWPRRVEYFVDKQLQVKAVTCG 362
Query: 119 RSHT-VVVTEDGNS 131
+T V E G S
Sbjct: 363 PWNTYVYAVEKGKS 376
Score = 33.9 bits (76), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 334 RCMDSGNMHHFV-GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
R ++ G H + A SWG ++G+LG+G ++ P+ ++ L+G+ + VA G
Sbjct: 161 RQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTL--EAELEPRLLEALQGLTMAEVAAG 218
Query: 393 YGHSLVIVDRTNV 405
HS+ + + ++
Sbjct: 219 GWHSVCVSETGDI 231
>sp|Q80YD6|SRGEF_MOUSE Secretion-regulating guanine nucleotide exchange factor OS=Mus
musculus GN=Sergef PE=2 SV=2
Length = 464
Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 110/373 (29%), Positives = 158/373 (42%), Gaps = 67/373 (17%)
Query: 67 SCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK-IKKAGAGRSHTVVV 125
SC V + WG N GQLG G K P +S+ + IK G H+ VV
Sbjct: 5 SCASETVSAAAVLFAWGANSYGQLGLGHKEDVFLPQQLSDFCQAGCIKSVTGGGGHSAVV 64
Query: 126 TEDGNSLAFGWNKHGQLGSGSIRNEIEPS---PVR-CLVSEVTATACGADFTVWLSSVEG 181
T+ G+ G NK GQLG G + + P+R C + +V ACG DFT+ L+ E
Sbjct: 65 TDGGDLFVCGLNKDGQLGLGHTEEVLRFTICKPLRGCPIRQV---ACGWDFTIMLT--EK 119
Query: 182 ASILNAGLPQYGQLG--HGTDNEYNTKDSSVKLAYEAQPR----PRAIAALAGETIVKVA 235
+L+ G +GQLG HG PR P+AI L E +V VA
Sbjct: 120 GQVLSCGSNAFGQLGVPHG-------------------PRKCVVPQAIECLR-EKVVCVA 159
Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE---AVIS- 291
G H +A + G V+ WG G G R + +P + + + V E AV +
Sbjct: 160 AGLRHALATTATGSVFQWGT-GLASSGRRLCPGQNLPLFLTAKEPSRVTGLENSTAVCAV 218
Query: 292 AGSVNSSCTAGGGQLYMWGKLKNN---GDDWMYPKPLMDLSGW----NLRCMDSGNMHHF 344
AGS +S+ G+LY+WG+ K+ P P + + + + SG H
Sbjct: 219 AGSDHSASLTDTGELYVWGRNKHGQLASRAVFLPLPQRIEAHYFQDEKVTAVWSGWTHLV 278
Query: 345 VGADS-SCISWGHAQYGELG--------YGPYGQKSS--------AMPKKVDILEGMHVI 387
++ +WG A YG+LG P Q SS ++P + L G I
Sbjct: 279 AKTETGKVFTWGRADYGQLGRRLEPPEAQKPVEQDSSLAFQGPQNSVPSPLHCLTGATEI 338
Query: 388 SVACGYGHSLVIV 400
S CG H+L ++
Sbjct: 339 S--CGSEHNLAVI 349
Score = 88.6 bits (218), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 142/373 (38%), Gaps = 49/373 (13%)
Query: 60 FVAAGCVSC------HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIK 113
F AGC+ H V G + G N+ GQLG G + R TI L I+
Sbjct: 45 FCQAGCIKSVTGGGGHSAVVTDGGDLFVCGLNKDGQLGLGHTEEVLRFTICKPLRGCPIR 104
Query: 114 KAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSPVRCLVSEVTATACGADF 172
+ G T+++TE G L+ G N GQLG R + P + CL +V A G
Sbjct: 105 QVACGWDFTIMLTEKGQVLSCGSNAFGQLGVPHGPRKCVVPQAIECLREKVVCVAAGLRH 164
Query: 173 TVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIV 232
+ A+ + Q+G G + ++ L A+ P + L T V
Sbjct: 165 AL-------ATTATGSVFQWGT-GLASSGRRLCPGQNLPLFLTAK-EPSRVTGLENSTAV 215
Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV--FQRNNVLPPEAVI 290
G++H+ ++ G +Y WG +G+L R +P+R++ FQ V +
Sbjct: 216 CAVAGSDHSASLTDTGELYVWGRNKHGQLASRAVFLP-LPQRIEAHYFQDEKV----TAV 270
Query: 291 SAGSVNSSCTAGGGQLYMWGK------------------------LKNNGDDWMYPKPLM 326
+G + G+++ WG+ L G P PL
Sbjct: 271 WSGWTHLVAKTETGKVFTWGRADYGQLGRRLEPPEAQKPVEQDSSLAFQGPQNSVPSPLH 330
Query: 327 DLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHV 386
L+G + G+ H+ C SWG ++G G G + P + +
Sbjct: 331 CLTGATE--ISCGSEHNLAVIRDKCCSWGWNEHGMCGDGTESNVWTPTPVQALPPSPSRL 388
Query: 387 ISVACGYGHSLVI 399
+ V CG GHSL +
Sbjct: 389 LLVGCGAGHSLAV 401
>sp|A6NED2|RCCD1_HUMAN RCC1 domain-containing protein 1 OS=Homo sapiens GN=RCCD1 PE=1 SV=1
Length = 376
Score = 92.8 bits (229), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 90/210 (42%), Gaps = 29/210 (13%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H + +D G+ ++WG GQLGHG P ++ L + + AG H+V V+E
Sbjct: 169 HALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAGGWHSVCVSET 228
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
G+ +GWN+ GQL P R L + A A+ LN
Sbjct: 229 GDIYIWGWNESGQLAL----------PTRNLAEDGETVA------------REATELNED 266
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
Q + G +D + QP P + G VK +CG+ HT V G
Sbjct: 267 GSQVKRTG-------GAEDGAPAPFIAVQPFPALLDLPMGSDAVKASCGSRHTAVVTRTG 319
Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
+YTWG+G YG+LGH + PRRV+ F
Sbjct: 320 ELYTWGWGKYGQLGHEDTTSLDRPRRVEYF 349
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Query: 218 PRPRAIAALAGETIVK-VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
PR LA E + + G H + +D+ G V++WG G +G+LGH + E PR ++
Sbjct: 146 PRAPFYRPLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLE 205
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
Q + A ++AG +S C + G +Y+WG
Sbjct: 206 ALQGLVM----AEVAAGGWHSVCVSETGDIYIWG 235
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 63/173 (36%), Gaps = 44/173 (25%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG------ 91
G L+ L P L L G+ + VAAG H V V G Y WG NE GQL
Sbjct: 193 GTLEAEL-EPRLLEALQGLVMAEVAAG--GWHSVCVSETGDIYIWGWNESGQLALPTRNL 249
Query: 92 --HGDKIQRDRPTIVSELSKYKIK------------------------------KAGAGR 119
G+ + R+ + + S+ K KA G
Sbjct: 250 AEDGETVAREATELNEDGSQVKRTGGAEDGAPAPFIAVQPFPALLDLPMGSDAVKASCGS 309
Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS---EVTATACG 169
HT VVT G +GW K+GQLG + P V V +V A CG
Sbjct: 310 RHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEYFVDKQLQVKAVTCG 362
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 45/107 (42%), Gaps = 8/107 (7%)
Query: 33 VGRRKGALDGNLVSPTRLRPLVGV-DIRF----VAAGCVSCHCVAVDVEGRCYTWGRNER 87
V R GA DG ++P + D+ V A C S H V G YTWG +
Sbjct: 270 VKRTGGAEDGAPAPFIAVQPFPALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKY 329
Query: 88 GQLGHGDKIQRDRPTIVSEL--SKYKIKKAGAGRSHT-VVVTEDGNS 131
GQLGH D DRP V + ++K G +T V E G S
Sbjct: 330 GQLGHEDTTSLDRPRRVEYFVDKQLQVKAVTCGPWNTYVYAVEKGKS 376
Score = 33.9 bits (76), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 334 RCMDSGNMHHFV-GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
R ++ G H + A SWG ++G+LG+G ++ P+ ++ L+G+ + VA G
Sbjct: 161 RQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTL--EAELEPRLLEALQGLVMAEVAAG 218
Query: 393 YGHSLVIVDRTNV 405
HS+ + + ++
Sbjct: 219 GWHSVCVSETGDI 231
>sp|Q15034|HERC3_HUMAN Probable E3 ubiquitin-protein ligase HERC3 OS=Homo sapiens GN=HERC3
PE=1 SV=1
Length = 1050
Score = 92.4 bits (228), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 123/280 (43%), Gaps = 36/280 (12%)
Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRC-LVSE--VTATACGADFTVWLSSVEGASILNAG 188
L +G+ GQ G + I P C +S+ V ACG + +V+L +E + G
Sbjct: 2 LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFL--LEDGEVYTCG 59
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
L GQLGH + +P I ALA + I+ VACG +H++A+ +G
Sbjct: 60 LNTKGQLGHEREGN----------------KPEQIGALADQHIIHVACGESHSLALSDRG 103
Query: 249 YVYTWGFGGYGRLGHREQKDEW-VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
+++WG G G+LG +D VPR + + +L +S G+ + A GQ +
Sbjct: 104 QLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQ----VSCGNWHCLALAADGQFF 159
Query: 308 MWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQY 359
WGK L P+ + L G L + +G H F + S + WG
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNA 219
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
G+LG +K P V +L V+ ++CG H+ V+
Sbjct: 220 GQLGLS--DEKDRESPCHVKLLRTQKVVYISCGEEHTAVL 257
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 93/331 (28%), Positives = 145/331 (43%), Gaps = 36/331 (10%)
Query: 82 WGRNERGQLGHGDKIQ--RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
WG GQ G +Q P + +S +K+ G +H+V + EDG G N
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
GQLG R +P + L + + ACG ++ LS + + + G GQLG
Sbjct: 64 GQLGHE--REGNKPEQIGALADQHIIHVACGESHSLALS--DRGQLFSWGAGSDGQLGLM 119
Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
T T+DS PR I L +TI++V+CG H +A+ + G +TWG +
Sbjct: 120 T-----TEDSVA--------VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSH 166
Query: 259 GRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGD 317
G+LG +E + P+RV R+ P A ++AG +S + G ++ WG + N G
Sbjct: 167 GQLGLGKEFPSQASPQRV----RSLEGIPLAQVAAGGAHSFALSLSGAVFGWG-MNNAGQ 221
Query: 318 -------DWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQ 369
D P + L + + G H V S ++G G+LG+
Sbjct: 222 LGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMND 281
Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+ + P++V L G V +ACG H+L V
Sbjct: 282 EVN--PRRVLELMGSEVTQIACGRQHTLAFV 310
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 110/258 (42%), Gaps = 24/258 (9%)
Query: 20 GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
GE+ CG +G + +GN P ++ L D + C H +A+ G+
Sbjct: 53 GEVYTCGLNTKGQLGHER---EGN--KPEQIGALA--DQHIIHVACGESHSLALSDRGQL 105
Query: 80 YTWGRNERGQLG-HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
++WG GQLG + P ++ +L++ I + G H + + DG +G N
Sbjct: 106 FSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNS 165
Query: 139 HGQLGSGS-IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
HGQLG G ++ P VR L A + S+ GA + G+ GQLG
Sbjct: 166 HGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA-VFGWGMNNAGQLGL 224
Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
+ + + P + L + +V ++CG HT + G V+T+G G
Sbjct: 225 SDEKD--------------RESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 258 YGRLGHREQKDEWVPRRV 275
G+LGH DE PRRV
Sbjct: 271 CGQLGHDSMNDEVNPRRV 288
Score = 86.7 bits (213), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 75/154 (48%), Gaps = 4/154 (2%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
SP R+R L G+ + VAAG H A+ + G + WG N GQLG D+ R+ P V
Sbjct: 180 SPQRVRSLEGIPLAQVAAG--GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVK 237
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
L K+ G HT V+T+ G FG GQLG S+ +E+ P V L+ SEVT
Sbjct: 238 LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVT 297
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
ACG T+ G I G GQLG G
Sbjct: 298 QIACGRQHTLAFVPSSGL-IYAFGCGARGQLGTG 330
Score = 85.9 bits (211), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 141/315 (44%), Gaps = 35/315 (11%)
Query: 63 AGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
C H V + +G YT G N +GQLGH + + ++P + L+ I G SH+
Sbjct: 39 VACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIIHVACGESHS 96
Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVSE-VTATACGADFTVW--LSS 178
+ +++ G ++G GQLG + + + P ++ L + + +CG W L+
Sbjct: 97 LALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGN----WHCLAL 152
Query: 179 VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGT 238
G +GQLG G + + +Q P+ + +L G + +VA G
Sbjct: 153 AADGQFFTWGKNSHGQLGLGKE-------------FPSQASPQRVRSLEGIPLAQVAAGG 199
Query: 239 NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSS 298
H+ A+ G V+ WG G+LG ++KD P V + + V+ IS G +++
Sbjct: 200 AHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVV----YISCGEEHTA 255
Query: 299 CTAGGGQLYMW-----GKLKNNG-DDWMYPKPLMDLSGWNLRCMDSGNMHH--FVGADSS 350
G ++ + G+L ++ +D + P+ +++L G + + G H FV +
Sbjct: 256 VLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 315
Query: 351 CISWGHAQYGELGYG 365
++G G+LG G
Sbjct: 316 IYAFGCGARGQLGTG 330
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 3/113 (2%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
SP ++ L + +++ G H + G +T+G GQLGH P V
Sbjct: 232 SPCHVKLLRTQKVVYISCG--EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL 289
Query: 106 ELSKYKIKKAGAGRSHTV-VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
EL ++ + GR HT+ V G AFG GQLG+G N PSPV+
Sbjct: 290 ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVK 342
Score = 38.5 bits (88), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 339 GNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLV 398
GN F+ D + G G+LG+ G K P+++ L H+I VACG HSL
Sbjct: 43 GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIIHVACGESHSLA 98
Query: 399 IVDR 402
+ DR
Sbjct: 99 LSDR 102
>sp|Q9UGK8|SRGEF_HUMAN Secretion-regulating guanine nucleotide exchange factor OS=Homo
sapiens GN=SERGEF PE=1 SV=2
Length = 458
Score = 91.7 bits (226), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 147/352 (41%), Gaps = 61/352 (17%)
Query: 85 NERGQLGHGDKIQRDRPTIVSELSKYK-IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG 143
N GQLG G K P +++ K + +++ G H+ VVT+ G+ G NK GQLG
Sbjct: 23 NSYGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTDGGDLFVCGLNKDGQLG 82
Query: 144 SGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG--HGTD 200
G + +P + L + ACG DFT+ L+ E +L+ G +GQLG HG
Sbjct: 83 LGHTEDIPYFTPCKSLFGCPIQQVACGWDFTIMLT--ENGQVLSCGSNSFGQLGVPHG-- 138
Query: 201 NEYNTKDSSVKLAYEAQPR----PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
PR P+AI L E +V +A G H VA + G V+ WG
Sbjct: 139 -----------------PRRCVVPQAI-ELHKEKVVCIAAGLRHAVAATASGIVFQWGT- 179
Query: 257 GYGRLGHREQKDEWVPRRVDVFQRNNVLPPE----AVISAGSVNSSCTAGGGQLYMW--- 309
G G R + +P + + V E + AGS +S+ G++Y+W
Sbjct: 180 GLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSN 239
Query: 310 --GKLKNNGDDWMYPKPLMDLSGWN--LRCMDSGNMHHFVGADS-SCISWGHAQYGELG- 363
G+L N P+ + N + + SG H ++ +WG A YG+LG
Sbjct: 240 KHGQLANEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGR 299
Query: 364 ---------------YGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
+ P + ++MP L G V+CG H+L I+
Sbjct: 300 KLETYEGWKLEKQDSFLPCSRPPNSMPSSPHCLTG--ATEVSCGSEHNLAII 349
Score = 68.9 bits (167), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 124/303 (40%), Gaps = 44/303 (14%)
Query: 18 KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSC---HCVAVD 74
+ G++L CGS + +G G P R +++ C++ H VA
Sbjct: 118 ENGQVLSCGSNSFGQLGVPHG--------PRRCVVPQAIELHKEKVVCIAAGLRHAVAAT 169
Query: 75 VEGRCYTWGRNERG---QLGHGDKI----QRDRPTIVSELSKYKIKKAGAGRSHTVVVTE 127
G + WG +L G + P+ V+ L K AG H+ +T+
Sbjct: 170 ASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTD 229
Query: 128 DGNSLAFGWNKHGQLGSGS----IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
G +G NKHGQL + + + +IE C +E TA + +T ++ E
Sbjct: 230 AGEVYVWGSNKHGQLANEAAFLPVPQKIE---AHCFQNE-KVTAIWSGWTHLVAQTETGK 285
Query: 184 ILNAGLPQYGQLGHGTDN----EYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
+ G YGQLG + + +DS + + P + L G T +V+CG+
Sbjct: 286 MFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSRPPNSMPSSPHCLTGAT--EVSCGSE 343
Query: 240 HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSC 299
H +A+ G Y+WG+ +G G + + W P+ P +A++S+ + C
Sbjct: 344 HNLAIIG-GVCYSWGWNEHGMCGDGTEANVWAPK-----------PVQALLSSSGLLVGC 391
Query: 300 TAG 302
AG
Sbjct: 392 GAG 394
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 58/134 (43%), Gaps = 18/134 (13%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLG------HGDKIQRD-------RPTIVSELSKYKIKKA 115
H VA G+ +TWGR + GQLG G K+++ RP S + + A
Sbjct: 276 HLVAQTETGKMFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSRPPNSMPSSPHCLTGA 335
Query: 116 ---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEV-TATACGAD 171
G H + + G ++GWN+HG G G+ N P PV+ L+S CGA
Sbjct: 336 TEVSCGSEHNLAII-GGVCYSWGWNEHGMCGDGTEANVWAPKPVQALLSSSGLLVGCGAG 394
Query: 172 FTVWLSSVEGASIL 185
++ L + L
Sbjct: 395 HSLALCQLPAHPAL 408
Score = 32.3 bits (72), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Query: 65 CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVV 124
C S H +A+ + G CY+WG NE G G G + P V L G G H++
Sbjct: 340 CGSEHNLAI-IGGVCYSWGWNEHGMCGDGTEANVWAPKPVQALLSSSGLLVGCGAGHSLA 398
Query: 125 VTE 127
+ +
Sbjct: 399 LCQ 401
>sp|Q9N1T2|RPGR_CANFA X-linked retinitis pigmentosa GTPase regulator OS=Canis familiaris
GN=RPGR PE=2 SV=1
Length = 1003
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 151/336 (44%), Gaps = 46/336 (13%)
Query: 77 GRCYTWGRNERGQ-LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G +T+G+ + + + + D PT +S G HT VVT + FG
Sbjct: 12 GAVFTFGKTQFAENIPSKFWFRNDVPTFLS-----------CGDEHTAVVTGNNKLYMFG 60
Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
N GQLG GS +P+ V+ L E V ACG + T L S EG + AG GQ
Sbjct: 61 SNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHT--LVSTEGGKVYAAGGNNEGQ 118
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK-VACGTNHTVAVDSKGYVYTW 253
LG G E +T I+ + +K ++ G+N + A+ G ++ W
Sbjct: 119 LGLGDTEERSTF--------------HLISFFTSQRKIKQLSAGSNTSAALTEDGELFMW 164
Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-- 311
G G++G + VP++V V + P + IS G +S+ GQLY +G+
Sbjct: 165 GDNSEGQIGLENVTNVCVPQQVTVGK------PISWISCGYYHSAFVTTEGQLYTFGEPE 218
Query: 312 -----LKNNG-DDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYG 365
L N + P+P+ + G ++ G H V + + ++G Q+G+LG G
Sbjct: 219 CGKLGLPNQLLVNHRMPQPVPGIPGKVVQVA-CGGGHTVVLTEKAVYTFGLGQFGQLGLG 277
Query: 366 PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
+ ++S +PK ++ ++ + +ACG H+ +I D
Sbjct: 278 TFLFETS-VPKAIEHIKDQKISFIACGENHTALITD 312
Score = 85.1 bits (209), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 124/314 (39%), Gaps = 76/314 (24%)
Query: 22 LLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
L GS W +G + + PT ++ L ++F A C H + G+ Y
Sbjct: 56 LYMFGSNNWGQLGLGSKS---TVSKPTCVKALKPEKVKF--AACGRNHTLVSTEGGKVYA 110
Query: 82 WGRNERGQLGHGDKIQRDRPTIVSEL-SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
G N GQLG GD +R ++S S+ KIK+ AG + + +TEDG +G N G
Sbjct: 111 AGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTEDGELFMWGDNSEG 170
Query: 141 QLGSGSIRNEIEPS----------------------------------------PVRCLV 160
Q+G ++ N P P + LV
Sbjct: 171 QIGLENVTNVCVPQQVTVGKPISWISCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLV 230
Query: 161 S------------EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
+ +V ACG TV L+ ++ GL Q+GQLG GT
Sbjct: 231 NHRMPQPVPGIPGKVVQVACGGGHTVVLTE---KAVYTFGLGQFGQLGLGT--------- 278
Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGR--LGHREQ 266
+E P+AI + + I +ACG NHT + G +YT+G G +G+ LG
Sbjct: 279 ---FLFETS-VPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDGRHGKLGLGLENS 334
Query: 267 KDEWVPRRVDVFQR 280
++++P F R
Sbjct: 335 TNQFIPTLCSNFLR 348
Score = 62.4 bits (150), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 85/192 (44%), Gaps = 15/192 (7%)
Query: 219 RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
+P + AL E + ACG NHT+ G VY G G+LG + ++ + F
Sbjct: 77 KPTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFF 136
Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLSGW 331
+ +SAGS S+ G+L+MWG L+N + + P G
Sbjct: 137 TSQRKI---KQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVCV---PQQVTVGK 190
Query: 332 NLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVA 390
+ + G H FV + ++G + G+LG + MP+ V + G V+ VA
Sbjct: 191 PISWISCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPG-KVVQVA 249
Query: 391 CGYGHSLVIVDR 402
CG GH++V+ ++
Sbjct: 250 CGGGHTVVLTEK 261
>sp|P25183|RCC1_XENLA Regulator of chromosome condensation OS=Xenopus laevis GN=rcc1 PE=2
SV=1
Length = 424
Score = 85.1 bits (209), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 98/373 (26%), Positives = 155/373 (41%), Gaps = 32/373 (8%)
Query: 49 RLRP-LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
R +P LV + V A H V + G YT+G N+ G LG RD SE+
Sbjct: 63 RKKPALVTLTEDIVQAAAGGMHTVCLGASGSIYTFGCNDEGALG------RDTSEEGSEM 116
Query: 108 SKYKIKKA------GAGRSHTVVVTEDGNSLAFG--WNKHGQLG-SGSIRNEIEPSPVRC 158
K++ A AG SHT +TEDG FG + +G +G ++ + P V+
Sbjct: 117 QPGKVELAEKVVQVSAGDSHTAALTEDGRVFVFGSFRDNNGVIGLLEPMKKSMVPVQVQ- 175
Query: 159 LVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP 218
+ + V A G D V L +V+G + +G + GQLG + + L P
Sbjct: 176 INTPVIKIASGNDHLVLL-TVDG-DLYTSGCGEQGQLGR-VPERFTNRGGRKGLERLLVP 232
Query: 219 RPRAIAALAGETI--VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
+ + A + V CG T AV +G+VY +G Y +LG + + + P+ +
Sbjct: 233 QCIHLKAKGSGRVHFQDVFCGAYFTFAVSQEGHVYGFGLSNYHQLGTKNTQACYAPQNLT 292
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLS 329
F+ N S G ++ C G+ Y G+ L N ++ P P+ DL
Sbjct: 293 SFK--NSTKSWIGFSGGQHHTVCVDSEGKAYSLGRAEYGRLGLGENAEEQSEPTPIPDLP 350
Query: 330 GWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
N ++ + V D +WG +LG G S LE V+SV
Sbjct: 351 KIN-SVASGASVSYAVSTDGCVFAWGMGTNLQLGTGEEEDVWSPEQMTGKHLEDREVLSV 409
Query: 390 ACGYGHSLVIVDR 402
+ G H++++V +
Sbjct: 410 SSGGQHTVLLVRK 422
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 133/340 (39%), Gaps = 43/340 (12%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI-QRDRPTIVSELSKYKIKKA 115
D++ A + H V G+ T G+ + GQLG G+ I +R +P +V+ I +A
Sbjct: 21 DVKKTKALPIVTHPSHGTVGGQVLTLGQGDVGQLGLGEDIMERKKPALVTLTED--IVQA 78
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIR--NEIEPSPVRCLVSEVTATACGADFT 173
AG HTV + G+ FG N G LG + +E++P V L +V + G T
Sbjct: 79 AAGGMHTVCLGASGSIYTFGCNDEGALGRDTSEEGSEMQPGKVE-LAEKVVQVSAGDSHT 137
Query: 174 VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
L+ E + G + + + L + + ++K
Sbjct: 138 AALT--EDGRVFVFG-------------SFRDNNGVIGLLEPMKKSMVPVQVQINTPVIK 182
Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDE-----------WVPRRVDVFQRNN 282
+A G +H V + G +YT G G G+LG ++ VP+ + + + +
Sbjct: 183 IASGNDHLVLLTVDGDLYTSGCGEQGQLGRVPERFTNRGGRKGLERLLVPQCIHLKAKGS 242
Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLRC 335
+ G+ + + G +Y +G L N N P+ L
Sbjct: 243 GRVHFQDVFCGAYFTFAVSQEGHVYGFG-LSNYHQLGTKNTQACYAPQNLTSFKNSTKSW 301
Query: 336 MD-SGNMHHFVGADS--SCISWGHAQYGELGYGPYGQKSS 372
+ SG HH V DS S G A+YG LG G ++ S
Sbjct: 302 IGFSGGQHHTVCVDSEGKAYSLGRAEYGRLGLGENAEEQS 341
>sp|Q90XC2|NEK8_DANRE Serine/threonine-protein kinase Nek8 OS=Danio rerio GN=nek8 PE=2
SV=1
Length = 697
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 123/279 (44%), Gaps = 20/279 (7%)
Query: 55 GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK 114
GV I+ V+ G + C+ G T+G G LGHG+ +P IV L Y++ +
Sbjct: 397 GVTIKSVSCGDLFTTCLTD--RGIIMTFGSGSNGCLGHGNFNDVTQPKIVEALLGYELVQ 454
Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFT 173
G SH + VT + ++G +G+LG + + P V E CG D +
Sbjct: 455 VSCGASHVLAVTNEREVFSWGRGDNGRLGLATQDSHNCPQQVSLPADFEAQRVLCGVDCS 514
Query: 174 VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI--AALAGETI 231
+ +S+ IL G ++ +L G D T++ S E + + A L E I
Sbjct: 515 MIMSTQH--QILACGNNRFNKL--GLDKVSGTEEPSSFCQVEEVHLFQLVQSAPLNTEKI 570
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
V + GT H+VAV KG +T+G +G+LG ++ VP +V Q + +
Sbjct: 571 VYIDIGTAHSVAVTEKGQCFTFGSNQHGQLGCSHRRSSRVPYQVSGLQGIT------MAA 624
Query: 292 AGSVNSSCTAGGGQLYMWGK-----LKNNGDDWMYPKPL 325
G + G++Y WGK L +D+ PKP+
Sbjct: 625 CGDAFTLAIGAEGEVYTWGKGARGRLGRKEEDFGIPKPV 663
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 113/249 (45%), Gaps = 34/249 (13%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
++ P + L+G ++ V C + H +AV E ++WGR + G+LG + + P
Sbjct: 437 DVTQPKIVEALLGYEL--VQVSCGASHVLAVTNEREVFSWGRGDNGRLGLATQDSHNCPQ 494
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE 162
VS + ++ ++ G +++++ LA G N+ +LG + EPS C V E
Sbjct: 495 QVSLPADFEAQRVLCGVDCSMIMSTQHQILACGNNRFNKLGLDKVSGTEEPSSF-CQVEE 553
Query: 163 ------VTATACGADFTVWL--------SSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
V + + V++ + E G Q+GQLG + + S
Sbjct: 554 VHLFQLVQSAPLNTEKIVYIDIGTAHSVAVTEKGQCFTFGSNQHGQLGCS-----HRRSS 608
Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
V P ++ L G I ACG T+A+ ++G VYTWG G GRLG R+++D
Sbjct: 609 RV---------PYQVSGLQG--ITMAACGDAFTLAIGAEGEVYTWGKGARGRLG-RKEED 656
Query: 269 EWVPRRVDV 277
+P+ V +
Sbjct: 657 FGIPKPVQL 665
Score = 37.4 bits (85), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 46/102 (45%), Gaps = 6/102 (5%)
Query: 215 EAQPR--PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
+ QP+ R + +G TI V+CG T + +G + T+G G G LGH D P
Sbjct: 382 QMQPQFISRFLEGQSGVTIKSVSCGDLFTTCLTDRGIIMTFGSGSNGCLGHGNFNDVTQP 441
Query: 273 RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
+ V+ ++ +S G+ + +++ WG+ N
Sbjct: 442 KIVEALLGYELVQ----VSCGASHVLAVTNEREVFSWGRGDN 479
Score = 33.5 bits (75), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 67/159 (42%), Gaps = 12/159 (7%)
Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS--AGSVNSSCTAGGGQLY 307
VYTWG G L E + + Q+ V +I+ A SV G G+
Sbjct: 322 VYTWGSGISTPLRLPMLNTEVIQVSLGRTQKMGVTKSGRLITWEAPSV------GSGEPT 375
Query: 308 MWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
+ G ++ ++ + L SG ++ + G++ D I ++G G LG+G
Sbjct: 376 LPGAVEQMQPQFI-SRFLEGQSGVTIKSVSCGDLFTTCLTDRGIIMTFGSGSNGCLGHGN 434
Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
+ + PK V+ L G ++ V+CG H L + + V
Sbjct: 435 FNDVTQ--PKIVEALLGYELVQVSCGASHVLAVTNEREV 471
>sp|Q8BTU7|RCCD1_MOUSE RCC1 domain-containing protein 1 OS=Mus musculus GN=Rccd1 PE=2 SV=2
Length = 377
Score = 82.4 bits (202), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 89/211 (42%), Gaps = 33/211 (15%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H + + G+ ++WG GQLGHG P ++ L ++ K AG H+V ++E
Sbjct: 172 HVLLLCAAGQVFSWGAGRHGQLGHGTLEAELEPRLLEALQGLRMAKVAAGGWHSVCLSET 231
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
G+ +GWN+ GQL + R+ E R E A+ LN
Sbjct: 232 GDIYIWGWNESGQLALPT-RSGTENKAER----------------------EEATELNE- 267
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEA-QPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
G E D+ + A QP P + G V +CG+ HT V
Sbjct: 268 --------DGLKEELAVADAGAPAHFIAIQPFPALLDLPLGSDAVMASCGSRHTAVVTRT 319
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
G +YTWG+G YG+LGH++ P V+ F
Sbjct: 320 GELYTWGWGKYGQLGHKDSTSLDRPCCVEYF 350
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Query: 218 PRPRAIAALAGETIVK-VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
P P LA E V+ + G H + + + G V++WG G +G+LGH + E PR ++
Sbjct: 149 PEPPFCQPLAPELRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAELEPRLLE 208
Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
Q + A ++AG +S C + G +Y+WG
Sbjct: 209 ALQGLRM----AKVAAGGWHSVCLSETGDIYIWG 238
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 66/171 (38%), Gaps = 42/171 (24%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL------G 91
G L+ L P L L G+ + VAAG H V + G Y WG NE GQL G
Sbjct: 196 GTLEAEL-EPRLLEALQGLRMAKVAAG--GWHSVCLSETGDIYIWGWNESGQLALPTRSG 252
Query: 92 HGDKIQRDRPTIVSE---LSKYKIKKAGA---------------------------GRSH 121
+K +R+ T ++E + + AGA G H
Sbjct: 253 TENKAEREEATELNEDGLKEELAVADAGAPAHFIAIQPFPALLDLPLGSDAVMASCGSRH 312
Query: 122 TVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS---EVTATACG 169
T VVT G +GW K+GQLG + P V V EV A CG
Sbjct: 313 TAVVTRTGELYTWGWGKYGQLGHKDSTSLDRPCCVEYFVERQLEVRAVTCG 363
Score = 33.5 bits (75), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 332 NLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVA 390
+R ++ G H + A SWG ++G+LG+G ++ P+ ++ L+G+ + VA
Sbjct: 162 RVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTL--EAELEPRLLEALQGLRMAKVA 219
Query: 391 CGYGHSLVIVDRTNV 405
G HS+ + + ++
Sbjct: 220 AGGWHSVCLSETGDI 234
>sp|Q86SG6|NEK8_HUMAN Serine/threonine-protein kinase Nek8 OS=Homo sapiens GN=NEK8 PE=1
SV=1
Length = 692
Score = 82.4 bits (202), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 114/248 (45%), Gaps = 30/248 (12%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
++ PT + L+G ++ V C + H +A+ E + WGR + G+LG G + P
Sbjct: 430 DISQPTIVEALLGYEM--VQVACGASHVLALSTERELFAWGRGDSGRLGLGTRESHSCPQ 487
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE 162
V + ++ G ++++T G +LA G N+ +LG + EP P + +
Sbjct: 488 QVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDHLSLGEEPVPHQQVEEA 547
Query: 163 VTATACGAD-------FTVWLSSVEGASILNA------GLPQYGQLGHGTDNEYNTKDSS 209
++ T G+ ++ L + A++ + G Q+GQLG NT+ S
Sbjct: 548 LSFTLLGSAPLDQEPLLSIDLGTAHSAAVTASGDCYTFGSNQHGQLG------TNTRRGS 601
Query: 210 VKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDE 269
P + L G + VACG TVA+ ++ VY+WG G GRLG R++ D
Sbjct: 602 RA--------PCKVQGLEGIKMAMVACGDAFTVAIGAESEVYSWGKGARGRLGRRDE-DA 652
Query: 270 WVPRRVDV 277
+PR V +
Sbjct: 653 GLPRPVQL 660
Score = 75.9 bits (185), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 120/279 (43%), Gaps = 18/279 (6%)
Query: 55 GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK 114
GV I+ VA G C+ G T+G G LGHG +PTIV L Y++ +
Sbjct: 390 GVTIKHVACGDFFTACLTD--RGIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQ 447
Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFT 173
G SH + ++ + A+G G+LG G+ + P V E CG D +
Sbjct: 448 VACGASHVLALSTERELFAWGRGDSGRLGLGTRESHSCPQQVPMPPGQEAQRVVCGIDSS 507
Query: 174 VWLSSVEGASILNAGLPQYGQLG--HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
+ L +V G + L G ++ +LG H + E V+ A A L E +
Sbjct: 508 MIL-TVPGQA-LACGSNRFNKLGLDHLSLGEEPVPHQQVEEALSFT--LLGSAPLDQEPL 563
Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
+ + GT H+ AV + G YT+G +G+LG ++ P +V + + A+++
Sbjct: 564 LSIDLGTAHSAAVTASGDCYTFGSNQHGQLGTNTRRGSRAPCKVQGLEGIKM----AMVA 619
Query: 292 AGSVNSSCTAGGGQLYMWGK-----LKNNGDDWMYPKPL 325
G + ++Y WGK L +D P+P+
Sbjct: 620 CGDAFTVAIGAESEVYSWGKGARGRLGRRDEDAGLPRPV 658
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 96/389 (24%), Positives = 158/389 (40%), Gaps = 55/389 (14%)
Query: 42 GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGD------K 95
G L +P RL P++ ++ VAAG V GR W E LG G
Sbjct: 319 GGLGTPLRL-PMLNTEVVQVAAG--RTQKAGVTRSGRLILW---EAPPLGAGGGSLLPGA 372
Query: 96 IQRDRPTIVSEL----SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEI 151
+++ +P +S S IK G T +T+ G + FG +G LG GS+ +
Sbjct: 373 VEQPQPQFISRFLEGQSGVTIKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDIS 432
Query: 152 EPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSV 210
+P+ V L+ E+ ACGA + LS+ + G G+LG GT ++
Sbjct: 433 QPTIVEALLGYEMVQVACGASHVLALSTER--ELFAWGRGDSGRLGLGTRESHSC----- 485
Query: 211 KLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG--HREQKD 268
P+ + G+ +V CG + ++ + G G + +LG H +
Sbjct: 486 ---------PQQVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDHLSLGE 536
Query: 269 EWVP-RRVDVFQRNNVL-------PPEAVISAGSVNSSCTAGGGQLYMWGKLK------N 314
E VP ++V+ +L P I G+ +S+ G Y +G + N
Sbjct: 537 EPVPHQQVEEALSFTLLGSAPLDQEPLLSIDLGTAHSAAVTASGDCYTFGSNQHGQLGTN 596
Query: 315 NGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSA 373
P + L G + + G+ +GA+S SWG G LG + +
Sbjct: 597 TRRGSRAPCKVQGLEGIKMAMVACGDAFTVAIGAESEVYSWGKGARGRLG---RRDEDAG 653
Query: 374 MPKKVDILEG--MHVISVACGYGHSLVIV 400
+P+ V + E V SV+C +G++L+ V
Sbjct: 654 LPRPVQLDETHPYTVTSVSCCHGNTLLAV 682
>sp|Q91ZR4|NEK8_MOUSE Serine/threonine-protein kinase Nek8 OS=Mus musculus GN=Nek8 PE=1
SV=1
Length = 698
Score = 82.0 bits (201), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 122/281 (43%), Gaps = 22/281 (7%)
Query: 55 GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK 114
GV I+ VA G + C+ G T+G G LGHG+ +PTIV L Y++ +
Sbjct: 396 GVTIKHVACGDLFTACLTD--RGIIMTFGSGSNGCLGHGNLTDISQPTIVEALLGYEMVQ 453
Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS---EVTATACGAD 171
G SH + ++ DG F W + G E P + V+ E CG D
Sbjct: 454 VACGASHVLALSTDGE--LFAWGRGDGGRLGLGTRESHNCPQQVPVAPGQEAQRVVCGID 511
Query: 172 FTVWLSSVEGASILNAGLPQYGQLG--HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
++ L+S +L G ++ +LG H + +E V+ A P A L E
Sbjct: 512 SSMILTS--PGRVLACGSNRFNKLGLDHLSLDEEPVPYQQVEEALSFT--PLGSAPLDQE 567
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
++ V GT H+ A+ + G YT+G +G+LG ++ P RV + ++ +
Sbjct: 568 PLLCVDLGTAHSAAITASGDCYTFGSNQHGQLGTSSRRVSRAPCRVQGLEGIKMV----M 623
Query: 290 ISAGSVNSSCTAGGGQLYMWGK-----LKNNGDDWMYPKPL 325
++ G + G++Y WGK L +D P+P+
Sbjct: 624 VACGDAFTVAVGAEGEVYSWGKGTRGRLGRRDEDAGLPRPV 664
Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 117/252 (46%), Gaps = 33/252 (13%)
Query: 42 GNLV---SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
GNL PT + L+G ++ V C + H +A+ +G + WGR + G+LG G +
Sbjct: 432 GNLTDISQPTIVEALLGYEM--VQVACGASHVLALSTDGELFAWGRGDGGRLGLGTRESH 489
Query: 99 DRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
+ P V + ++ G ++++T G LA G N+ +LG + + EP P +
Sbjct: 490 NCPQQVPVAPGQEAQRVVCGIDSSMILTSPGRVLACGSNRFNKLGLDHLSLDEEPVPYQQ 549
Query: 159 LVSEVTATACGAD-------FTVWLSSVEGASILNA------GLPQYGQLGHGTDNEYNT 205
+ ++ T G+ V L + A+I + G Q+GQLG T
Sbjct: 550 VEEALSFTPLGSAPLDQEPLLCVDLGTAHSAAITASGDCYTFGSNQHGQLG--------T 601
Query: 206 KDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHRE 265
V A P + L G +V VACG TVAV ++G VY+WG G GRLG R+
Sbjct: 602 SSRRVSRA------PCRVQGLEGIKMVMVACGDAFTVAVGAEGEVYSWGKGTRGRLGRRD 655
Query: 266 QKDEWVPRRVDV 277
+ D +PR V +
Sbjct: 656 E-DAGLPRPVQL 666
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 131/318 (41%), Gaps = 51/318 (16%)
Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSP---VRCLVSE---- 162
++ + AGR+ VT G + + G G + +E P P R L +
Sbjct: 339 EVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGTLLPGAVELPQPQFVSRFLEGQSGVT 398
Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
+ ACG FT L+ + I+ G G LGHG N D S +P
Sbjct: 399 IKHVACGDLFTACLT--DRGIIMTFGSGSNGCLGHG-----NLTDIS---------QPTI 442
Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
+ AL G +V+VACG +H +A+ + G ++ WG G GRLG ++ P++V V
Sbjct: 443 VEALLGYEMVQVACGASHVLALSTDGELFAWGRGDGGRLGLGTRESHNCPQQVPVAPGQE 502
Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN--GDDWMY----PKPLMD--------- 327
+ G +S G++ G + N G D + P P
Sbjct: 503 A----QRVVCGIDSSMILTSPGRVLACGSNRFNKLGLDHLSLDEEPVPYQQVEEALSFTP 558
Query: 328 -----LSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDIL 381
L L C+D G H + A C ++G Q+G+LG ++ S P +V L
Sbjct: 559 LGSAPLDQEPLLCVDLGTAHSAAITASGDCYTFGSNQHGQLGTS--SRRVSRAPCRVQGL 616
Query: 382 EGMHVISVACGYGHSLVI 399
EG+ ++ VACG ++ +
Sbjct: 617 EGIKMVMVACGDAFTVAV 634
>sp|Q8TD19|NEK9_HUMAN Serine/threonine-protein kinase Nek9 OS=Homo sapiens GN=NEK9 PE=1
SV=2
Length = 979
Score = 79.0 bits (193), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 93/216 (43%), Gaps = 26/216 (12%)
Query: 55 GVDIRFVAAGCVSCHCVAVDVEGRCYTW-----GRNERGQLGHGDKIQRDRPTIVSELSK 109
G R V AG + H V VE YTW G GQLGHGDK +P V +L
Sbjct: 368 GCSARQVCAG--NTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 425
Query: 110 YKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNE--IEPSPVRCLVSE-VTAT 166
I++ G TV VT++G AFG + +G +G + +EP + +S V
Sbjct: 426 KAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFFLSNPVEQV 485
Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
+CG + V L+ + + G +YG+LG ++ +Y T P+ +
Sbjct: 486 SCGDNHVVVLT--RNKEVYSWGCGEYGRLGLDSEEDYYT--------------PQKVDVP 529
Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
IV V CG + T + G V G + +LG
Sbjct: 530 KALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLG 565
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 129/316 (40%), Gaps = 39/316 (12%)
Query: 113 KKAGAGRSHTVVVTEDGN-----SLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTAT 166
++ AG +H VVT + ++ G HGQLG G + +P V L + +
Sbjct: 372 RQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQV 431
Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
+CG DFTV ++ + + G YG +G K+A P +
Sbjct: 432 SCGDDFTVCVT--DEGQLYAFGSDYYGCMGVD------------KVAGPEVLEPMQLNFF 477
Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR------ 280
+ +V+CG NH V + VY+WG G YGRLG ++D + P++VDV +
Sbjct: 478 LSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAV 537
Query: 281 ------NNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNG-DDWMYPKPLM---DLSG 330
+L + A +N G Q M G + + + Y LS
Sbjct: 538 QCGCDGTFLLTQSGKVLACGLNEFNKLGLNQC-MSGIINHEAYHEVPYTTSFTLAKQLSF 596
Query: 331 WNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
+ +R + G H + +++G + G+LG G Y +K + L G VI V
Sbjct: 597 YKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNY-KKRLGINLLGGPLGGKQVIRV 655
Query: 390 ACGYGHSLVIVDRTNV 405
+CG ++ D ++
Sbjct: 656 SCGDEFTIAATDDNHI 671
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 104/257 (40%), Gaps = 32/257 (12%)
Query: 20 GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
G+L GS + +G K A ++ P +L + + V+ G H V +
Sbjct: 445 GQLYAFGSDYYGCMGVDKVA-GPEVLEPMQLNFFLSNPVEQVSCG--DNHVVVLTRNKEV 501
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
Y+WG E G+LG + P V I G T ++T+ G LA G N+
Sbjct: 502 YSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEF 561
Query: 140 GQLG-----SGSIRNE----IEPSPVRCLVSEVT-----ATACGADFTVWLSSVEGASIL 185
+LG SG I +E + + L +++ A G T + E +L
Sbjct: 562 NKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAID--ERGRLL 619
Query: 186 NAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVD 245
G + GQLG G N K +L P L G+ +++V+CG T+A
Sbjct: 620 TFGCNKCGQLGVG-----NYKK---RLGINLLGGP-----LGGKQVIRVSCGDEFTIAAT 666
Query: 246 SKGYVYTWGFGGYGRLG 262
+++ WG GG GRL
Sbjct: 667 DDNHIFAWGNGGNGRLA 683
Score = 34.7 bits (78), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 13/108 (12%)
Query: 300 TAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQ 358
T+ ++Y+WG K+ K SG + R + +GN H V + +W + Q
Sbjct: 343 TSRTSEVYVWGGGKSTPQKLDVIK-----SGCSARQVCAGNTHFAVVTVEKELYTWVNMQ 397
Query: 359 -----YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
+G+LG+G + S PK V+ L+G + V+CG ++ + D
Sbjct: 398 GGTKLHGQLGHG--DKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTD 443
>sp|Q92834|RPGR_HUMAN X-linked retinitis pigmentosa GTPase regulator OS=Homo sapiens
GN=RPGR PE=1 SV=2
Length = 1020
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 99/239 (41%), Gaps = 38/239 (15%)
Query: 61 VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
V C H V + Y +G N GQLG G K +PT V L K+K A GR+
Sbjct: 38 VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRN 97
Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE----------VTATACGA 170
HT+V TE GN A G N GQLG G + SE T+ A
Sbjct: 98 HTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTE 157
Query: 171 D--FTVWLSSVEG----ASILNAGLPQYGQLGHGTD--------NEYNTKDSSV------ 210
D +W + EG ++ N +PQ +G + + T D +
Sbjct: 158 DGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHSAFVTTDGELYVFGEP 217
Query: 211 ---KLAYEAQ----PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
KL Q R + + E +++VACG HTV + ++ VYT+G G +G+LG
Sbjct: 218 ENGKLGLPNQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVL-TENAVYTFGLGQFGQLG 275
>sp|Q8K1R7|NEK9_MOUSE Serine/threonine-protein kinase Nek9 OS=Mus musculus GN=Nek9 PE=1
SV=2
Length = 984
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 92/216 (42%), Gaps = 26/216 (12%)
Query: 55 GVDIRFVAAGCVSCHCVAVDVEGRCYTW-----GRNERGQLGHGDKIQRDRPTIVSELSK 109
G R V AG + H V VE YTW G GQLGHGDK +P V +L
Sbjct: 368 GCSARQVCAG--NTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 425
Query: 110 YKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNE--IEPSPVRCLVSE-VTAT 166
I + G TV VT++G AFG + +G +G + +EP + +S V
Sbjct: 426 KAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPMQLNFFLSNPVEQV 485
Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
+CG + V L+ + + G +YG+LG ++ +Y T P+ +
Sbjct: 486 SCGDNHVVVLT--RNKEVYSWGCGEYGRLGLDSEEDYYT--------------PQRVDVP 529
Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
IV V CG + T + G V G + +LG
Sbjct: 530 KALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLG 565
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 129/316 (40%), Gaps = 39/316 (12%)
Query: 113 KKAGAGRSHTVVVTEDGN-----SLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTAT 166
++ AG +H VVT + ++ G HGQLG G + +P V L + +
Sbjct: 372 RQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQV 431
Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
+CG DFTV ++ + + G YG +G K++ P +
Sbjct: 432 SCGDDFTVCVT--DEGQLYAFGSDYYGCMGVD------------KVSGPEVLEPMQLNFF 477
Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR------ 280
+ +V+CG NH V + VY+WG G YGRLG ++D + P+RVDV +
Sbjct: 478 LSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAV 537
Query: 281 ------NNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNG-DDWMYPKPLM---DLSG 330
+L + A +N G Q M G + + + Y LS
Sbjct: 538 QCGCDGTFLLTQSGKVLACGLNEFNKLGLNQC-MSGIINHEAYHEVPYTTSFTLAKQLSF 596
Query: 331 WNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
+ +R + G H + +++G + G+LG G Y +K + L G VI V
Sbjct: 597 YKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNY-KKRLGINLLGGPLGGKQVIRV 655
Query: 390 ACGYGHSLVIVDRTNV 405
+CG ++ D ++
Sbjct: 656 SCGDEFTIAATDDNHI 671
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 103/257 (40%), Gaps = 32/257 (12%)
Query: 20 GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
G+L GS + +G K + ++ P +L + + V+ G H V +
Sbjct: 445 GQLYAFGSDYYGCMGVDKVS-GPEVLEPMQLNFFLSNPVEQVSCG--DNHVVVLTRNKEV 501
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
Y+WG E G+LG + P V I G T ++T+ G LA G N+
Sbjct: 502 YSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEF 561
Query: 140 GQLG-----SGSIRNE----IEPSPVRCLVSEVT-----ATACGADFTVWLSSVEGASIL 185
+LG SG I +E + + L +++ A G T + E +L
Sbjct: 562 NKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAID--ERGRLL 619
Query: 186 NAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVD 245
G + GQLG G + +L P L G+ +++V+CG T+A
Sbjct: 620 TFGCNKCGQLGVGNYKK--------RLGINLLGGP-----LGGKQVIRVSCGDEFTIAAT 666
Query: 246 SKGYVYTWGFGGYGRLG 262
+++ WG GG GRL
Sbjct: 667 DDNHIFAWGNGGNGRLA 683
Score = 34.7 bits (78), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 13/108 (12%)
Query: 300 TAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQ 358
T+ ++Y+WG K+ K SG + R + +GN H V + +W + Q
Sbjct: 343 TSRTSEVYVWGGGKSTPQKLDVIK-----SGCSARQVCAGNTHFAVVTVEKELYTWVNMQ 397
Query: 359 -----YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
+G+LG+G + S PK V+ L+G + V+CG ++ + D
Sbjct: 398 GGTKLHGQLGHG--DKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTD 443
>sp|F2Z461|HERC6_MOUSE E3 ISG15--protein ligase Herc6 OS=Mus musculus GN=Herc6 PE=2 SV=1
Length = 1003
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 123/284 (43%), Gaps = 30/284 (10%)
Query: 47 PTRLRP-LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
P RL+ G+++ A+G H + + R Y+ G N GQLG +RP +
Sbjct: 12 PRRLKAGTSGIELLQAASG--EHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQ 69
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN-EIEPSPVRCLVS-EV 163
L+ + G+ H+V V G A+G GQLG G + P+ ++ L ++
Sbjct: 70 ALNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKI 129
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
+CG ++ LS E + + G GQLG G ++ +Q P+ +
Sbjct: 130 IQVSCGHYHSLALS--EDGHVFSWGRNSEGQLGLGKNS-------------RSQAIPQKV 174
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRL---GHREQKDEWVPRRVDVFQR 280
+L G + +VA G H+ A+ G + WG G+L G++ ++ + P + +
Sbjct: 175 KSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKN 234
Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKP 324
+V+ IS G +++ GQ++ +G N + P P
Sbjct: 235 LSVI----YISCGYEHTAVLTEEGQVFTFG---GNSSGQLQPSP 271
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 109/254 (42%), Gaps = 30/254 (11%)
Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
E+ A G ++ L S + + G +GQLG D ++ RP
Sbjct: 23 ELLQAASGEHHSLLLFS--NHRVYSCGDNSWGQLGQRRD--------------QSTERPE 66
Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD-EWVPRRVDVFQR 280
I AL + V+CG H+VAV KG V+ WG G G+LG E K+ ++P ++
Sbjct: 67 PIQALNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAG 126
Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLSGWNL 333
++ +S G +S + G ++ WG+ L N P+ + L G L
Sbjct: 127 IKIIQ----VSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPL 182
Query: 334 RCMDSGNMHHF-VGADSSCISWGHAQYGELGY-GPYGQKSSAMPKKVDILEGMHVISVAC 391
+ +G H F + + WG + G+L G ++ P + L+ + VI ++C
Sbjct: 183 AQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISC 242
Query: 392 GYGHSLVIVDRTNV 405
GY H+ V+ + V
Sbjct: 243 GYEHTAVLTEEGQV 256
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 86/190 (45%), Gaps = 14/190 (7%)
Query: 219 RPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
+PR + A +G +++ A G +H++ + S VY+ G +G+LG R + P +
Sbjct: 11 KPRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQA 70
Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLSG 330
+V ++S G +S G+++ WG + + P + L+G
Sbjct: 71 LNDLHV----DLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAG 126
Query: 331 WNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
+ + G+ H + D SWG G+LG G +S A+P+KV LEG+ + V
Sbjct: 127 IKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGK-NSRSQAIPQKVKSLEGIPLAQV 185
Query: 390 ACGYGHSLVI 399
A G HS +
Sbjct: 186 AAGGTHSFAL 195
>sp|Q8IVU3|HERC6_HUMAN Probable E3 ubiquitin-protein ligase HERC6 OS=Homo sapiens GN=HERC6
PE=2 SV=2
Length = 1022
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 137/306 (44%), Gaps = 36/306 (11%)
Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGS-GSIRNEIEPSPVRCLVSEVT-ATAC 168
++ +A +G H++++ + L+ G N GQLG G+ R E+ P P++ L + + +C
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGEL-PEPIQALETLIVDLVSC 82
Query: 169 GADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAG 228
G + + L+ + G GQLG G E + P+ I L
Sbjct: 83 GKEHS--LAVCHKGRVFAWGAGSEGQLGIGEFKEISFT-------------PKKIMTLND 127
Query: 229 ETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH-REQKDEWVPRRVDVFQRNNVLPPE 287
I++V+CG H++A+ V++WG +G+LG +E + P+RV R+ P
Sbjct: 128 IKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRV----RSLEGIPL 183
Query: 288 AVISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLM--DLSGWNLRCMDS 338
A ++AG +S + G + WG L KPL L + +
Sbjct: 184 AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISC 243
Query: 339 GNMHHFV-GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G+ H V D ++G + G+LGY P +K P+ V+ ++G+ V + CG H+L
Sbjct: 244 GDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRG--PQLVERIDGL-VSQIDCGSYHTL 300
Query: 398 VIVDRT 403
V T
Sbjct: 301 AYVHTT 306
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 63/132 (47%), Gaps = 5/132 (3%)
Query: 46 SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL---GHGDKIQRDRPT 102
SP R+R L G+ + VAAG H A+ + G + WG N GQL G +Q ++P
Sbjct: 171 SPQRVRSLEGIPLAQVAAG--GAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPL 228
Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE 162
V L + G +HT V+T+DG FG N+ GQLG + P V +
Sbjct: 229 SVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDGL 288
Query: 163 VTATACGADFTV 174
V+ CG+ T+
Sbjct: 289 VSQIDCGSYHTL 300
>sp|Q9R0X5|RPGR_MOUSE X-linked retinitis pigmentosa GTPase regulator OS=Mus musculus
GN=Rpgr PE=1 SV=2
Length = 1001
Score = 75.5 bits (184), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 133/342 (38%), Gaps = 73/342 (21%)
Query: 65 CVSC---HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSH 121
C+SC H V + Y +G N GQLG G K +PT + L K+K A GR+H
Sbjct: 39 CLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNH 98
Query: 122 TVVVTEDGNSLAFGWNKHGQLGSGSI--RNEIEPSPVRCLVSEVTATACGADFTVWLSSV 179
T+V T+ G A G N GQLG G R+ + + GA+ + L+
Sbjct: 99 TLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALT-- 156
Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
E + G GQ+G S+V + +E G+ I ++CG
Sbjct: 157 EDGKLFMWGDNSEGQIGL-------EDKSNVCIPHE---------VTVGKPISWISCGYY 200
Query: 240 HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSC 299
H+ V G +YT+G G+LG +P + + R+ P+ V+
Sbjct: 201 HSAFVTMDGELYTFGEPENGKLG--------LPNELLMNHRS----PQRVLGIPERVIQV 248
Query: 300 TAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQY 359
GGG H V + ++G Q+
Sbjct: 249 ACGGG-------------------------------------HTVVLTEKVVYAFGLGQF 271
Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
G+LG G + ++S PK ++ ++ + ++CG H+ ++ +
Sbjct: 272 GQLGLGTFLFETSE-PKIIERIKDQKICHISCGENHTALMTE 312
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 109/297 (36%), Gaps = 74/297 (24%)
Query: 19 GGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGR 78
+L GS W +G A ++ PT ++ L ++ A C H + G
Sbjct: 53 NNKLYMFGSNNWGQLGLGSKAA---IIKPTCIKALKPEKVKL--AACGRNHTLVSTDTGG 107
Query: 79 CYTWGRNERGQLGHGDKIQRDR-PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
Y G N GQLG GD RD IV IK+ AG + + +TEDG +G N
Sbjct: 108 VYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALTEDGKLFMWGDN 167
Query: 138 KHGQLG----------------------------------SGSIRNEIEP---------- 153
GQ+G G + EP
Sbjct: 168 SEGQIGLEDKSNVCIPHEVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPNE 227
Query: 154 ------SPVRCL--VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNT 205
SP R L V ACG TV L+ + GL Q+GQLG GT
Sbjct: 228 LLMNHRSPQRVLGIPERVIQVACGGGHTVVLTE---KVVYAFGLGQFGQLGLGT------ 278
Query: 206 KDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
+E P+ I + + I ++CG NHT + G +YT+G G +G+LG
Sbjct: 279 ------FLFETS-EPKIIERIKDQKICHISCGENHTALMTELGLLYTFGDGRHGKLG 328
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 85/191 (44%), Gaps = 13/191 (6%)
Query: 219 RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
+P I AL E + ACG NHT+ G VY G G+LG + D ++ F
Sbjct: 77 KPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFF 136
Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPK-----PLMDLSGWNL 333
+ + +SAG+ S+ G+L+MWG + G + K P G +
Sbjct: 137 TPADTI---KQLSAGANTSAALTEDGKLFMWGD-NSEGQIGLEDKSNVCIPHEVTVGKPI 192
Query: 334 RCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV-DILEGMHVISVAC 391
+ G H FV D ++G + G+LG + P++V I E VI VAC
Sbjct: 193 SWISCGYYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPE--RVIQVAC 250
Query: 392 GYGHSLVIVDR 402
G GH++V+ ++
Sbjct: 251 GGGHTVVLTEK 261
>sp|Q5DX34|RPGRH_CAEEL X-linked retinitis pigmentosa GTPase regulator homolog
OS=Caenorhabditis elegans GN=glo-4 PE=1 SV=1
Length = 1392
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 131/350 (37%), Gaps = 70/350 (20%)
Query: 62 AAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK-----IKKAG 116
A C + H + + G+ WG N GQ G G + ++ L + I+K
Sbjct: 780 AIACGAEHILVLSSSGQLSAWGGNRFGQCGVGHSFR------IANLHQVDGDWPAIEKIA 833
Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSG--SIRNEIEPSPVRCLVSEVTATACGADFTV 174
G+ H+ + DG+ FGW GQLG G + N++ P+ V L+ +VT ACG TV
Sbjct: 834 CGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRVNGLICKVTQIACGRAHTV 893
Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
L+ + +L G YGQ+G D +K + P P L + +
Sbjct: 894 VLT--DTGRVLVCGSGSYGQMG---------VDDDIKKVFAFTPLP-----LGPLRVRDI 937
Query: 235 ACGTNHTVAVDSKGYVYTWGFGGY--------------GRLGHREQKDEWVPRRVDVFQR 280
A H++ + V+ WG +L + E P R
Sbjct: 938 ATHYYHSICITEDNRVFEWGRNPQELKMRMFVMKKIRSAQLKNTEDPSSPSPSTNGSTPR 997
Query: 281 NNV-LPPE-------------------AVISAGSVNSSCTAGGGQLYMWGKLKN------ 314
N+ LP E ++ G +S+ G LY WGK +
Sbjct: 998 VNLNLPAEIPREDLGLREVKHFLDGNIVSVACGLSHSALITSEGTLYTWGKGLDYQLGHG 1057
Query: 315 NGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELG 363
N ++ M P + + +G + GN H D S +WG +G+ G
Sbjct: 1058 NKNERMEPHQVFEPNGAKWVNVSLGNNHTIASTDDGSVFAWGKNDFGQCG 1107
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 107/279 (38%), Gaps = 46/279 (16%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
G + N + PTR+ L+ + C H V + GR G GQ+G D I+
Sbjct: 863 GRNNSNQLVPTRVNGLI---CKVTQIACGRAHTVVLTDTGRVLVCGSGSYGQMGVDDDIK 919
Query: 98 RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
+ L +++ H++ +TED F W ++ Q E++ +R
Sbjct: 920 KVFAFTPLPLGPLRVRDIATHYYHSICITEDNR--VFEWGRNPQ--------ELK---MR 966
Query: 158 CLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
V + + A + N P N V L A+
Sbjct: 967 MFV---------------MKKIRSAQLKNTEDPS------SPSPSTNGSTPRVNLNLPAE 1005
Query: 218 -PRP----RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
PR R + IV VACG +H+ + S+G +YTWG G +LGH + + P
Sbjct: 1006 IPREDLGLREVKHFLDGNIVSVACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNERMEP 1065
Query: 273 RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
+ VF+ N +S G+ ++ + G ++ WGK
Sbjct: 1066 HQ--VFEPNGA--KWVNVSLGNNHTIASTDDGSVFAWGK 1100
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 48/94 (51%)
Query: 56 VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKA 115
+D V+ C H + EG YTWG+ QLGHG+K +R P V E + K
Sbjct: 1020 LDGNIVSVACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNERMEPHQVFEPNGAKWVNV 1079
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
G +HT+ T+DG+ A+G N GQ G + +N
Sbjct: 1080 SLGNNHTIASTDDGSVFAWGKNDFGQCGVLTKKN 1113
Score = 36.6 bits (83), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 65/184 (35%), Gaps = 64/184 (34%)
Query: 219 RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
RPRAIA CG H + + S G + WG +G+
Sbjct: 777 RPRAIA-----------CGAEHILVLSSSGQLSAWGGNRFGQ------------------ 807
Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDS 338
G G + L DW P ++ + C
Sbjct: 808 ----------------------CGVGHSFRIANLHQVDGDW----PAIE----KIAC--- 834
Query: 339 GNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
G H F+ +D S ++G +G+LG+G + +P +V+ L V +ACG H++
Sbjct: 835 GQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRVNGL-ICKVTQIACGRAHTV 893
Query: 398 VIVD 401
V+ D
Sbjct: 894 VLTD 897
Score = 34.7 bits (78), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 85/237 (35%), Gaps = 46/237 (19%)
Query: 20 GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
G +L CGS + +G +P L PL DI H + + + R
Sbjct: 899 GRVLVCGSGSYGQMGVDDDIKKVFAFTPLPLGPLRVRDI-----ATHYYHSICITEDNRV 953
Query: 80 YTWGRNER--------------GQLGHGDKIQRDRPTI---------------------V 104
+ WGRN + QL + + P+ +
Sbjct: 954 FEWGRNPQELKMRMFVMKKIRSAQLKNTEDPSSPSPSTNGSTPRVNLNLPAEIPREDLGL 1013
Query: 105 SELSKY---KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCLV 160
E+ + I G SH+ ++T +G +G QLG G+ +EP V
Sbjct: 1014 REVKHFLDGNIVSVACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNERMEPHQVFEPNG 1073
Query: 161 SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
++ + G + T+ +S + S+ G +GQ G T N+ D + K ++A+
Sbjct: 1074 AKWVNVSLGNNHTI--ASTDDGSVFAWGKNDFGQCGVLTKKNGNSADVTKKFFFQAR 1128
>sp|Q7ZZC8|NEK9_XENLA Serine/threonine-protein kinase Nek9 OS=Xenopus laevis GN=nek9 PE=2
SV=1
Length = 944
Score = 72.0 bits (175), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 97/212 (45%), Gaps = 26/212 (12%)
Query: 59 RFVAAGCVSCHCVAVDVEGRCYTW-----GRNERGQLGHGDKIQRDRPTIVSELSKYKIK 113
R V AG H V VE YTW G GQLGHGD+ +P V +L ++
Sbjct: 354 RQVCAG--DAHFAVVTVEKELYTWVNMQGGSKLHGQLGHGDRASYRQPKHVEKLQGKSVQ 411
Query: 114 KAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEI-EPSPVRCLVSE-VTATACGA 170
K G TV +T++G +FG + +G LG + S +E+ EP V ++E V +CG
Sbjct: 412 KVSCGSDFTVCITDEGQLYSFGSDYYGCLGVNQSAGSEVLEPLLVDFFLNEPVDQVSCGD 471
Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
+ L+ S+ + G +YG+LG ++++ + P+ + G
Sbjct: 472 SHIMALT--RSKSVYSWGCGEYGRLGLDSEDDVYS--------------PQKVEVQRGLC 515
Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
IV V CG++ + + G V G + +LG
Sbjct: 516 IVNVCCGSDGSFLLTLTGKVLACGLNEHNKLG 547
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 132/307 (42%), Gaps = 41/307 (13%)
Query: 110 YKIKKAGAGRSHTVVVTEDGN-----SLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
++ ++ AG +H VVT + ++ G HGQLG G + +P V L + V
Sbjct: 351 WRARQVCAGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHGDRASYRQPKHVEKLQGKSV 410
Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
+CG+DFTV ++ + + + G YG LG N S L P +
Sbjct: 411 QKVSCGSDFTVCIT--DEGQLYSFGSDYYGCLG------VNQSAGSEVL------EPLLV 456
Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR--- 280
E + +V+CG +H +A+ VY+WG G YGRLG + D + P++V+V QR
Sbjct: 457 DFFLNEPVDQVSCGDSHIMALTRSKSVYSWGCGEYGRLGLDSEDDVYSPQKVEV-QRGLC 515
Query: 281 ----------NNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNG-DDWMYPKPLM--- 326
+ +L + A +N G Q Y G + + + Y L
Sbjct: 516 IVNVCCGSDGSFLLTLTGKVLACGLNEHNKLGLNQ-YTAGIINHEAFQEVPYTTSLTLAK 574
Query: 327 DLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMH 385
LS + +R + G H + +++G + G+LG G Y +K + L G
Sbjct: 575 QLSFYKIRSISPGRTHTAAIDERGRLLTFGSNKCGQLGVGDY-RKHLGINLLGGPLGGKQ 633
Query: 386 VISVACG 392
VI V+CG
Sbjct: 634 VIRVSCG 640
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 79/189 (41%), Gaps = 34/189 (17%)
Query: 233 KVACGTNHTVAVDSKGYVYTW-----GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE 287
+V G H V + +YTW G +G+LGH ++ P+ V+ Q +V
Sbjct: 355 QVCAGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHGDRASYRQPKHVEKLQGKSV---- 410
Query: 288 AVISAGSVNSSCTAGGGQLYMWGK----------------LKNNGDDWMYPKPLMDLSGW 331
+S GS + C GQLY +G L+ D+ +P+ +S
Sbjct: 411 QKVSCGSDFTVCITDEGQLYSFGSDYYGCLGVNQSAGSEVLEPLLVDFFLNEPVDQVS-- 468
Query: 332 NLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVAC 391
C DS M + S SWG +YG LG + P+KV++ G+ +++V C
Sbjct: 469 ---CGDSHIMA--LTRSKSVYSWGCGEYGRLGLD--SEDDVYSPQKVEVQRGLCIVNVCC 521
Query: 392 GYGHSLVIV 400
G S ++
Sbjct: 522 GSDGSFLLT 530
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 76/202 (37%), Gaps = 9/202 (4%)
Query: 65 CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVV 124
C H +A+ Y+WG E G+LG + P V I G + +
Sbjct: 469 CGDSHIMALTRSKSVYSWGCGEYGRLGLDSEDDVYSPQKVEVQRGLCIVNVCCGSDGSFL 528
Query: 125 VTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVW-LSSVEGAS 183
+T G LA G N+H +LG I V T+ + + + S+
Sbjct: 529 LTLTGKVLACGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLSFYKIRSISPGR 588
Query: 184 ILNAGLPQYGQL---GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
A + + G+L G + D L P L G+ +++V+CG
Sbjct: 589 THTAAIDERGRLLTFGSNKCGQLGVGDYRKHLGINLLGGP-----LGGKQVIRVSCGDEF 643
Query: 241 TVAVDSKGYVYTWGFGGYGRLG 262
T A + +++ WG GG GRL
Sbjct: 644 TTAATADNHIFAWGNGGNGRLA 665
Score = 42.4 bits (98), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 62/135 (45%), Gaps = 16/135 (11%)
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSG-WN 332
+V + R+N P ++ + + T+ ++Y+WG K P+ L G W
Sbjct: 300 KVSMLNRSNKKPRTGTVTEAPI-AVVTSRSSEVYVWGGGKTT------PQKLDVFKGGWR 352
Query: 333 LRCMDSGNMHH-FVGADSSCISWGHAQ-----YGELGYGPYGQKSSAMPKKVDILEGMHV 386
R + +G+ H V + +W + Q +G+LG+G + S PK V+ L+G V
Sbjct: 353 ARQVCAGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHG--DRASYRQPKHVEKLQGKSV 410
Query: 387 ISVACGYGHSLVIVD 401
V+CG ++ I D
Sbjct: 411 QKVSCGSDFTVCITD 425
>sp|P28745|RCC1_SCHPO Protein pim1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=pim1 PE=1 SV=2
Length = 539
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 92/370 (24%), Positives = 152/370 (41%), Gaps = 63/370 (17%)
Query: 38 GALDGNLVSPTRLRPLVGVD-IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG----- 91
G + ++V RL P++ D + V H A+ +GR YTWG N+ LG
Sbjct: 87 GEEEMDVVYRPRLNPILSTDKVGVVDLAVGGMHSAALSHDGRVYTWGVNDDYALGRLTKD 146
Query: 92 ----HGDKIQRD----RPTIVS-ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK--HG 140
+GDK+ D P+ V LS ++ K + T +T++G +G + G
Sbjct: 147 QKDENGDKVDNDLLEGTPSKVEGALSHLRVTKVICSDNLTAAITDNGCCFTWGTFRCSDG 206
Query: 141 QLG-SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
LG S S + EP+ +R + E+ A G D + L++ + G Q QLG
Sbjct: 207 VLGYSDSQKRTAEPTQMR--LPEICQLATGTDHIIALTTT--GKVYTWGNGQQFQLGR-- 260
Query: 200 DNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYG 259
+ + P+P LA + I+ V G+ H+ A+D+KG VY WG
Sbjct: 261 ------RMLERRRLQGLTPQP-----LALKNIISVGAGSYHSFAIDNKGRVYAWGLNITR 309
Query: 260 RLGHREQKDE-----WVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK--- 311
+ G + +E P VD + NV I+ G ++ G++ WG+
Sbjct: 310 QCGIEVEDEEEGAVITKPTLVDALEGYNV----KSITGGEHHTLALLEDGRVLAWGRDDR 365
Query: 312 ----LKNN-----------GDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWG 355
+ +N G+++ P + N+ + G H+ V +D SWG
Sbjct: 366 HQLGIPDNALPETVVKDEKGNNYYLSTPTIIPGLTNVIQVVCGTHHNLAVTSDGKVYSWG 425
Query: 356 HAQYGELGYG 365
A+ E+G G
Sbjct: 426 SAENYEVGQG 435
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 104/273 (38%), Gaps = 73/273 (26%)
Query: 51 RPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD-----RPTIVS 105
+PL +I V AG S H A+D +GR Y WG N Q G + + + +PT+V
Sbjct: 274 QPLALKNIISVGAG--SYHSFAIDNKGRVYAWGLNITRQCGIEVEDEEEGAVITKPTLVD 331
Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA 165
L Y +K G HT+ + EDG LA+G + QLG P L V
Sbjct: 332 ALEGYNVKSITGGEHHTLALLEDGRVLAWGRDDRHQLGI----------PDNALPETVVK 381
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
G ++ +LS+ P I
Sbjct: 382 DEKGNNY--YLST-----------------------------------------PTIIPG 398
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
L +++V CGT+H +AV S G VY+WG +G + ++ V R+ +
Sbjct: 399 LTN--VIQVVCGTHHNLAVTSDGKVYSWGSAENYEVGQGDNDEDVA---VPTLVRSKAIK 453
Query: 286 PEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDD 318
A+ AG+ GGQ + + N ++
Sbjct: 454 EVAIRVAGA--------GGQFSIIAGIPNASEE 478
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 92/376 (24%), Positives = 146/376 (38%), Gaps = 86/376 (22%)
Query: 79 CYTWGRNERGQLGHG----DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
Y +G +LG G D + R R + K + G H+ ++ DG +
Sbjct: 73 VYVFGSGSMNELGMGEEEMDVVYRPRLNPILSTDKVGVVDLAVGGMHSAALSHDGRVYTW 132
Query: 135 GWNKHGQLGS----------GSIRNEI---EPSPVRCLVS--EVTATACGADFTVWLSSV 179
G N LG + N++ PS V +S VT C + T
Sbjct: 133 GVNDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVEGALSHLRVTKVICSDNLT------ 186
Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
A+I + G +D DS + A Q R I LA GT+
Sbjct: 187 --AAITDNGCCFTWGTFRCSDGVLGYSDSQKRTAEPTQMRLPEICQLA--------TGTD 236
Query: 240 HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV-------ISA 292
H +A+ + G VYTWG G +LG R + RR R L P+ + + A
Sbjct: 237 HIIALTTTGKVYTWGNGQQFQLGRR-----MLERR-----RLQGLTPQPLALKNIISVGA 286
Query: 293 GSVNSSCTAGGGQLYMWG---------KLKNNGDDWMYPKP-LMD-LSGWNLRCMDSGNM 341
GS +S G++Y WG ++++ + + KP L+D L G+N++ + +G
Sbjct: 287 GSYHSFAIDNKGRVYAWGLNITRQCGIEVEDEEEGAVITKPTLVDALEGYNVKSI-TGGE 345
Query: 342 HHFVG--ADSSCISWGHAQYGELGYGPYGQKSSAMPKKV--------------DILEGM- 384
HH + D ++WG +LG +A+P+ V I+ G+
Sbjct: 346 HHTLALLEDGRVLAWGRDDRHQLGI-----PDNALPETVVKDEKGNNYYLSTPTIIPGLT 400
Query: 385 HVISVACGYGHSLVIV 400
+VI V CG H+L +
Sbjct: 401 NVIQVVCGTHHNLAVT 416
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 82/194 (42%), Gaps = 27/194 (13%)
Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFG--GYGRLGHRE-QKDEWVPRRVDVFQRN 281
AL+ + KV C N T A+ G +TWG G LG+ + QK P ++
Sbjct: 170 ALSHLRVTKVICSDNLTAAITDNGCCFTWGTFRCSDGVLGYSDSQKRTAEPTQMR----- 224
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGK----------LKNNGDDWMYPKPLMDLSGW 331
LP ++ G+ + G++Y WG L+ + P+PL +
Sbjct: 225 --LPEICQLATGTDHIIALTTTGKVYTWGNGQQFQLGRRMLERRRLQGLTPQPL---ALK 279
Query: 332 NLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAM---PKKVDILEGMHVI 387
N+ + +G+ H F + +WG + G ++ A+ P VD LEG +V
Sbjct: 280 NIISVGAGSYHSFAIDNKGRVYAWGLNITRQCGIEVEDEEEGAVITKPTLVDALEGYNVK 339
Query: 388 SVACGYGHSLVIVD 401
S+ G H+L +++
Sbjct: 340 SITGGEHHTLALLE 353
Score = 36.2 bits (82), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 7/84 (8%)
Query: 44 LVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR-DRPT 102
L +PT + L V I+ V C + H +AV +G+ Y+WG E ++G GD + PT
Sbjct: 390 LSTPTIIPGLTNV-IQVV---CGTHHNLAVTSDGKVYSWGSAENYEVGQGDNDEDVAVPT 445
Query: 103 IVSE--LSKYKIKKAGAGRSHTVV 124
+V + + I+ AGAG +++
Sbjct: 446 LVRSKAIKEVAIRVAGAGGQFSII 469
>sp|Q8SSY6|SPKUL_DICDI Bifunctional serine/threonine-protein kinase/NEDD4-like E3
ubiquitin-protein ligase OS=Dictyostelium discoideum
GN=DDB_G0276527 PE=3 SV=2
Length = 1887
Score = 66.6 bits (161), Expect = 3e-10, Method: Composition-based stats.
Identities = 52/229 (22%), Positives = 98/229 (42%), Gaps = 22/229 (9%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDK--IQRDRPTIVSELSKYKIKKA 115
I+ V C + + +G +T+GR + G+LG G++ + + P +V L + I
Sbjct: 338 IKIVKLSCGTNRSAVITDKGLLFTFGRGDHGRLGLGEQSLLMQSTPKLVQSLQGHFIIDM 397
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVS---------EVTA 165
+G H++V+T G +FG N GQLG G N+ P ++ + +
Sbjct: 398 SSGGGHSLVLTNKGLVFSFGRNDQGQLGIGCFSNQQTIPKQIQWFQTSQQQQQQPINIIK 457
Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
+ G ++ +S + G YG LG D + D ++ + +
Sbjct: 458 VSAGGYHSIAIS--DNNDTYAWGRSDYGVLGTSIDVQ---GDRNLPVLINSNS-----VV 507
Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
+ + V+ G H VA+ G +Y+WG RLG + +++ P++
Sbjct: 508 VDNVKFIDVSSGFQHNVAMSIDGSLYSWGCNAGQRLGFKSDENQLTPKK 556
Score = 54.3 bits (129), Expect = 2e-06, Method: Composition-based stats.
Identities = 73/310 (23%), Positives = 116/310 (37%), Gaps = 73/310 (23%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR---PTIVS--------- 105
+R V+ H +A+ + G+ Y+WG N+ QLG G+ P +++
Sbjct: 243 LRVVSIANGGKHSLALTICGKVYSWGGNDSCQLGLGNGSSSSYYSLPQLINFNISYNNNN 302
Query: 106 -------------------------------ELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
+K KI K G + + V+T+ G F
Sbjct: 303 NNNNNNSTNNNNNNNNDGAQQQFSLSQNSSSNNNKIKIVKLSCGTNRSAVITDKGLLFTF 362
Query: 135 GWNKHGQLGSG--SIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASIL--NAGL- 189
G HG+LG G S+ + P V+ L F + +SS G S++ N GL
Sbjct: 363 GRGDHGRLGLGEQSLLMQSTPKLVQSLQGH---------FIIDMSSGGGHSLVLTNKGLV 413
Query: 190 -----PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV 244
GQLG G + T ++ +Q I+KV+ G H++A+
Sbjct: 414 FSFGRNDQGQLGIGCFSNQQTIPKQIQWFQTSQ-----QQQQQPINIIKVSAGGYHSIAI 468
Query: 245 DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV----ISAGSVNSSCT 300
Y WG YG LG D R + V +N + + V +S+G ++
Sbjct: 469 SDNNDTYAWGRSDYGVLG--TSIDVQGDRNLPVLINSNSVVVDNVKFIDVSSGFQHNVAM 526
Query: 301 AGGGQLYMWG 310
+ G LY WG
Sbjct: 527 SIDGSLYSWG 536
Score = 53.5 bits (127), Expect = 3e-06, Method: Composition-based stats.
Identities = 49/208 (23%), Positives = 94/208 (45%), Gaps = 33/208 (15%)
Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQK--DEWVPRRVDVFQRNNVLPPEA 288
IVK++CGTN + + KG ++T+G G +GRLG EQ + P+ V Q + ++
Sbjct: 340 IVKLSCGTNRSAVITDKGLLFTFGRGDHGRLGLGEQSLLMQSTPKLVQSLQGHFIID--- 396
Query: 289 VISAGSVNSSCTAGGGQLYMWGKLKNN-------GDDWMYPKPLMDLSGW--------NL 333
+S+G +S G ++ +G+ + PK + N+
Sbjct: 397 -MSSGGGHSLVLTNKGLVFSFGRNDQGQLGIGCFSNQQTIPKQIQWFQTSQQQQQQPINI 455
Query: 334 RCMDSGNMHHFVGADSS-CISWGHAQYGELGYGPYGQKSSAMPKKVD----ILEGMHVIS 388
+ +G H +D++ +WG + YG LG Q +P ++ +++ + I
Sbjct: 456 IKVSAGGYHSIAISDNNDTYAWGRSDYGVLGTSIDVQGDRNLPVLINSNSVVVDNVKFID 515
Query: 389 VACGYGHSLVI-VDRT------NVGERL 409
V+ G+ H++ + +D + N G+RL
Sbjct: 516 VSSGFQHNVAMSIDGSLYSWGCNAGQRL 543
Score = 47.8 bits (112), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/129 (26%), Positives = 61/129 (47%), Gaps = 14/129 (10%)
Query: 56 VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR--PTIVSE----LSK 109
++I V+AG H +A+ Y WGR++ G LG +Q DR P +++ +
Sbjct: 453 INIIKVSAG--GYHSIAISDNNDTYAWGRSDYGVLGTSIDVQGDRNLPVLINSNSVVVDN 510
Query: 110 YKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT--- 166
K +G H V ++ DG+ ++G N +LG S N++ +P +C ++ +
Sbjct: 511 VKFIDVSSGFQHNVAMSIDGSLYSWGCNAGQRLGFKSDENQL--TPKKCFINSKDSKPLL 568
Query: 167 -ACGADFTV 174
CG T+
Sbjct: 569 FTCGEIITI 577
Score = 35.8 bits (81), Expect = 0.63, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 5/92 (5%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELS---KYKIKK 114
I ++ G + H + +G YT+G G+LGHG+ P +V ++
Sbjct: 190 IVLISTGAI--HSSFITDQGNLYTFGDGLLGKLGHGNLESYSSPKLVEFFQTKPSLRVVS 247
Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS 146
G H++ +T G ++G N QLG G+
Sbjct: 248 IANGGKHSLALTICGKVYSWGGNDSCQLGLGN 279
>sp|P18754|RCC1_HUMAN Regulator of chromosome condensation OS=Homo sapiens GN=RCC1 PE=1
SV=1
Length = 421
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 84/367 (22%), Positives = 148/367 (40%), Gaps = 23/367 (6%)
Query: 49 RLRP-LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
R +P LV + V A H V + G+ Y++G N+ G LG ++
Sbjct: 57 RKKPALVSIPEDVVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVE 116
Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFG--WNKHGQLGS-GSIRNEIEPSPVRCLVSEVT 164
+ K+ + AG SHT +T+DG +G + +G +G ++ + P V+ V V
Sbjct: 117 LQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDVP-VV 175
Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
A G D V L++ + G + GQLG + + L P+ +
Sbjct: 176 KVASGNDHLVMLTA--DGDLYTLGCGEQGQLGR-VPELFANRGGRQGLERLLVPKCVMLK 232
Query: 225 ALAGETIVKVA---CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
+ V+ CG T A+ +G+VY +G Y +LG + ++P+ + F+
Sbjct: 233 SRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFK-- 290
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLSGW-NL 333
N S G ++ C G+ Y G+ L ++ P + L ++
Sbjct: 291 NSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSSV 350
Query: 334 RCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGY 393
C ++ + V D +WG +LG G S + LE V+SV+ G
Sbjct: 351 AC--GASVGYAVTKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMMGKQLENRVVLSVSSGG 408
Query: 394 GHSLVIV 400
H++++V
Sbjct: 409 QHTVLLV 415
Score = 39.7 bits (91), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 67/160 (41%), Gaps = 20/160 (12%)
Query: 95 KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
+I + R + K K K + RSH+ TE G L G GQLG G E +
Sbjct: 5 RIAKRRSPPADAIPKSKKVKV-SHRSHS---TEPGLVLTLGQGDVGQLGLGENVMERKKP 60
Query: 155 PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
+ + +V G TV LS + + + G G LG +D+SV+
Sbjct: 61 ALVSIPEDVVQAEAGGMHTVCLS--KSGQVYSFGCNDEGALG---------RDTSVE-GS 108
Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
E P + E +V+V+ G +HT A+ G V+ WG
Sbjct: 109 EMVPGKVELQ----EKVVQVSAGDSHTAALTDDGRVFLWG 144
>sp|Q6NRS1|IBTK_XENLA Inhibitor of Bruton tyrosine kinase OS=Xenopus laevis GN=ibtk PE=2
SV=1
Length = 1339
Score = 62.0 bits (149), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 106/241 (43%), Gaps = 24/241 (9%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSK--YKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
YTWG N LGHG + + P +V + IK+ + H+V +++ G G
Sbjct: 146 YTWGDNVNFTLGHGTQQSKHHPELVEMFPRSGVYIKQMVLCKFHSVFLSQKGQVYTCGHG 205
Query: 138 KHGQLGSGSIRNEIEPSPVRCLVSEVTATACGA-DFTVWLSSVEGASILNAGLPQYGQLG 196
+ G+LG G + P V L GA D TV L+ E + GL + QLG
Sbjct: 206 QGGRLGHGDELTCLVPRLVEGLRGHPCTQVAGAKDHTVVLT--EDGYVYTFGLNTFHQLG 263
Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
+ +S+V PR + G+T++ VA G HTV + +K VYT G
Sbjct: 264 ----IQPPPPNSNV-------PRQIQAKTMKGKTVLGVAAGRFHTV-LWTKDAVYTVGLN 311
Query: 257 GYGRLGHRE----QKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKL 312
G G+LG+ + +K PR+V ++ ++SA + C + G +Y+ +
Sbjct: 312 G-GQLGYLQDPNGEKFVSCPRQVSALHHKDI--NITLVSASDGATVCVSERGDIYLLSEY 368
Query: 313 K 313
+
Sbjct: 369 Q 369
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 81/192 (42%), Gaps = 26/192 (13%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H V + +G+ YT G + G+LGHGD++ P +V L + + + HTVV+TED
Sbjct: 189 HSVFLSQKGQVYTCGHGQGGRLGHGDELTCLVPRLVEGLRGHPCTQVAGAKDHTVVLTED 248
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
G FG N QLG I+P P V + +++G ++L
Sbjct: 249 GYVYTFGLNTFHQLG-------IQPPPPNSNVPR----------QIQAKTMKGKTVLGVA 291
Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR-------PRAIAALAGE--TIVKVACGTN 239
++ + D Y + +L Y P PR ++AL + I V+
Sbjct: 292 AGRFHTVLWTKDAVYTVGLNGGQLGYLQDPNGEKFVSCPRQVSALHHKDINITLVSASDG 351
Query: 240 HTVAVDSKGYVY 251
TV V +G +Y
Sbjct: 352 ATVCVSERGDIY 363
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 66/160 (41%), Gaps = 21/160 (13%)
Query: 121 HTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSE---VTATACGADFTVWL 176
H V T D L +G N + LG G+ +++ P V + +V+L
Sbjct: 134 HIVFKTSDPTELYTWGDNVNFTLGHGTQQSKHHPELVEMFPRSGVYIKQMVLCKFHSVFL 193
Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC 236
S + + G Q G+LGHG D L PR + L G +VA
Sbjct: 194 S--QKGQVYTCGHGQGGRLGHG--------DELTCLV------PRLVEGLRGHPCTQVAG 237
Query: 237 GTNHTVAVDSKGYVYTWGFGGYGRLG-HREQKDEWVPRRV 275
+HTV + GYVYT+G + +LG + VPR++
Sbjct: 238 AKDHTVVLTEDGYVYTFGLNTFHQLGIQPPPPNSNVPRQI 277
Score = 39.3 bits (90), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 94/225 (41%), Gaps = 32/225 (14%)
Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
LGHGT + + E PR +G I ++ H+V + KG VYT G
Sbjct: 156 LGHGTQQSKHHPE-----LVEMFPR-------SGVYIKQMVLCKFHSVFLSQKGQVYTCG 203
Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
G GRLGH ++ VPR V+ + + P ++ ++ G +Y +G L
Sbjct: 204 HGQGGRLGHGDELTCLVPRLVEGLRGH----PCTQVAGAKDHTVVLTEDGYVYTFG-LNT 258
Query: 315 NGDDWMYPKP----------LMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGY 364
+ P P + G + + +G H + + + G G+LGY
Sbjct: 259 FHQLGIQPPPPNSNVPRQIQAKTMKGKTVLGVAAGRFHTVLWTKDAVYTVG-LNGGQLGY 317
Query: 365 --GPYGQKSSAMPKKVDIL--EGMHVISVACGYGHSLVIVDRTNV 405
P G+K + P++V L + +++ V+ G ++ + +R ++
Sbjct: 318 LQDPNGEKFVSCPRQVSALHHKDINITLVSASDGATVCVSERGDI 362
Score = 36.6 bits (83), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 72/158 (45%), Gaps = 12/158 (7%)
Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
+YTWG LGH Q+ + P V++F R+ V + V+ +S + GQ+Y
Sbjct: 145 LYTWGDNVNFTLGHGTQQSKHHPELVEMFPRSGVYIKQMVLC--KFHSVFLSQKGQVYTC 202
Query: 310 GKLK----NNGDDW--MYPKPLMDLSGWNLRCMDSGNMHHFV-GADSSCISWGHAQYGEL 362
G + +GD+ + P+ + L G + H V D ++G + +L
Sbjct: 203 GHGQGGRLGHGDELTCLVPRLVEGLRGHPCTQVAGAKDHTVVLTEDGYVYTFGLNTFHQL 262
Query: 363 GYGPYGQKSSAMPKKVD--ILEGMHVISVACGYGHSLV 398
G P +S +P+++ ++G V+ VA G H+++
Sbjct: 263 GIQP-PPPNSNVPRQIQAKTMKGKTVLGVAAGRFHTVL 299
>sp|P21827|RCC1_YEAST Guanine nucleotide exchange factor SRM1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SRM1 PE=1 SV=1
Length = 482
Score = 62.0 bits (149), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 116/269 (43%), Gaps = 33/269 (12%)
Query: 58 IRFVAAGCVSCHCVAVDVEGRCYTWG--RNERGQLG-HGDKIQ-RDRPTIVSELSKYKIK 113
++ A +SC A+ G Y WG R G LG + DKI+ + P V SKY I
Sbjct: 168 VQLAATDNMSC---ALFSNGEVYAWGTFRCNEGILGFYQDKIKIQKTPWKVPTFSKYNIV 224
Query: 114 KAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIR----NEIEPSPVRCLVSEVTATACG 169
+ G+ H + + E+G A+G + QLG + ++P P + V A G
Sbjct: 225 QLAPGKDHILFLDEEGMVFAWGNGQQNQLGRKVMERFRLKTLDPRPFG--LRHVKYIASG 282
Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
+ L+ + +++ GL Q+GQ G D E D ++ +P+ +A
Sbjct: 283 ENHCFALT--KDNKLVSWGLNQFGQCGVSEDVE----DGALVT------KPKRLALPDNV 330
Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG-HREQKDEWV-------PRRVDVFQRN 281
I +A G +H++ + G +Y+ G +G ++ E+ R V + +
Sbjct: 331 VIRSIAAGEHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVPLPTKL 390
Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
N +P ++AGS +S A G Y WG
Sbjct: 391 NNVPKFKSVAAGSHHSVAVAQNGIAYSWG 419
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 108/251 (43%), Gaps = 27/251 (10%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE--LSKYKIKKAGAGRSHTVVVT 126
H + +D EG + WG ++ QLG ++R R + +K +G +H +T
Sbjct: 232 HILFLDEEGMVFAWGNGQQNQLGR-KVMERFRLKTLDPRPFGLRHVKYIASGENHCFALT 290
Query: 127 EDGNSLAFGWNKHGQLGSGSIRNEIE-----PSPVRCLVSE---VTATACGADFTVWLSS 178
+D +++G N+ GQ G + ++E P R + + + + A G ++ LS
Sbjct: 291 KDNKLVSWGLNQFGQCG---VSEDVEDGALVTKPKRLALPDNVVIRSIAAGEHHSLILS- 346
Query: 179 VEGASILNAGLPQYGQLGHGTDN--EYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC 236
+ + + G ++G DN EY KD K A P P + + VA
Sbjct: 347 -QDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKA--RAVPLPTKLNNVP--KFKSVAA 401
Query: 237 GTNHTVAVDSKGYVYTWGFGGYGRLGHRE-QKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
G++H+VAV G Y+WGFG +G + D VP R+ +N +I G
Sbjct: 402 GSHHSVAVAQNGIAYSWGFGETYAVGLGPFEDDTEVPTRI----KNTATQDHNIILVGCG 457
Query: 296 NSSCTAGGGQL 306
+GG +L
Sbjct: 458 GQFSVSGGVKL 468
Score = 49.3 bits (116), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 88/196 (44%), Gaps = 18/196 (9%)
Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG--GYGRLGHREQ--KDEWVPR 273
PR G +V++A N + A+ S G VY WG G LG + K + P
Sbjct: 154 PRESFPPLAEGHKVVQLAATDNMSCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQKTPW 213
Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN--GDDWM--YPKPLMDLS 329
+V F + N++ ++ G + G ++ WG + N G M + +D
Sbjct: 214 KVPTFSKYNIVQ----LAPGKDHILFLDEEGMVFAWGNGQQNQLGRKVMERFRLKTLDPR 269
Query: 330 GWNLR---CMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAM--PKKVDILEG 383
+ LR + SG H F + D+ +SWG Q+G+ G + + + PK++ + +
Sbjct: 270 PFGLRHVKYIASGENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVTKPKRLALPDN 329
Query: 384 MHVISVACGYGHSLVI 399
+ + S+A G HSL++
Sbjct: 330 VVIRSIAAGEHHSLIL 345
>sp|P25171|RCC1_DROME Regulator of chromosome condensation OS=Drosophila melanogaster
GN=Bj1 PE=1 SV=2
Length = 547
Score = 62.0 bits (149), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 117/263 (44%), Gaps = 34/263 (12%)
Query: 23 LFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTW 82
+F + D+ G +DGN +P L + G +A+G + H V + G+ +T
Sbjct: 147 VFAWGSFRDSHGNMGLTIDGNKRTPIDL--MEGTVCCSIASG--ADHLVILTTAGKVFTV 202
Query: 83 GRNERGQLG---------HGDKIQRD--RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
G E+GQLG G + +RD RPT + +++ K +A ++ + E
Sbjct: 203 GCAEQGQLGRLSERSISGEGRRGKRDLLRPTQLI-ITRAKPFEAIWATNYCTFMRESQTQ 261
Query: 132 L--AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGL 189
+ A G N QL + E +P++ + ++ A G TV L++ S++ G
Sbjct: 262 VIWATGLNNFKQLAHETKGKEFALTPIKTELKDIRHIAGGQHHTVILTTDLKCSVV--GR 319
Query: 190 PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGY 249
P+YG+LG G VK E +P + L E IV V CG + AV G
Sbjct: 320 PEYGRLGLG----------DVKDVVE---KPTIVKKLT-EKIVSVGCGEVCSYAVTIDGK 365
Query: 250 VYTWGFGGYGRLGHREQKDEWVP 272
+Y+WG G +LG + DE P
Sbjct: 366 LYSWGSGVNNQLGVGDGDDELEP 388
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 109/288 (37%), Gaps = 55/288 (19%)
Query: 63 AGCVSC---HCVAVDVEGRCYTWG--RNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
A C+S H + +GR + WG R+ G +G I ++ T + + +
Sbjct: 128 ALCISAGDSHSACLLEDGRVFAWGSFRDSHGNMGL--TIDGNKRTPIDLMEGTVCCSIAS 185
Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGS-----------IRNEIEPSPVRCLVSEVTAT 166
G H V++T G G + GQLG S R+ + P+ + ++
Sbjct: 186 GADHLVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRRGKRDLLRPTQLIITRAKPFEA 245
Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
++ ++ + I GL + QL H E + + A+ +
Sbjct: 246 IWATNYCTFMRESQTQVIWATGLNNFKQLAH-----------------ETKGKEFALTPI 288
Query: 227 AGE--TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
E I +A G +HTV + + G YGRLG + K DV ++ ++
Sbjct: 289 KTELKDIRHIAGGQHHTVILTTDLKCSVVGRPEYGRLGLGDVK--------DVVEKPTIV 340
Query: 285 PP--EAVISA--GSVNSSCTAGGGQLYMWGKLKNN------GDDWMYP 322
E ++S G V S G+LY WG NN GDD + P
Sbjct: 341 KKLTEKIVSVGCGEVCSYAVTIDGKLYSWGSGVNNQLGVGDGDDELEP 388
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 76/168 (45%), Gaps = 30/168 (17%)
Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP----PEAV-ISAGSVNSSCTAG 302
G V G G G+LG E D+ +R + P P+AV ISAG +++
Sbjct: 42 GNVLVCGNGDVGQLGLGE----------DILERKRLSPVAGIPDAVDISAGGMHNLVLTK 91
Query: 303 GGQLYMWG------KLKNNGDDWMYPKP-LMDLSGWNLRCMDSGNMHHF-VGADSSCISW 354
G +Y +G ++ +D KP L+DL G L C+ +G+ H + D +W
Sbjct: 92 SGDIYSFGCNDEGALGRDTSEDGSESKPDLIDLPGKAL-CISAGDSHSACLLEDGRVFAW 150
Query: 355 GHAQ--YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
G + +G +G G K + +D++EG S+A G H +++
Sbjct: 151 GSFRDSHGNMGLTIDGNKRTP----IDLMEGTVCCSIASGADHLVILT 194
Score = 35.0 bits (79), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 6/85 (7%)
Query: 47 PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV-- 104
PT ++ L + V+ GC AV ++G+ Y+WG QLG GD P +V
Sbjct: 337 PTIVKKLTE---KIVSVGCGEVCSYAVTIDGKLYSWGSGVNNQLGVGDGDDELEPIVVVS 393
Query: 105 -SELSKYKIKKAGAGRSHTVVVTED 128
+ K+ + +G G+ +V D
Sbjct: 394 KNTQGKHMLLASGGGQHAIFLVKAD 418
>sp|Q8VE37|RCC1_MOUSE Regulator of chromosome condensation OS=Mus musculus GN=Rcc1 PE=1
SV=1
Length = 421
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 148/365 (40%), Gaps = 25/365 (6%)
Query: 50 LRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSK 109
L PL+ ++ A G H V + G+ Y++G N+ G LG ++ +
Sbjct: 62 LVPLLQDVVQAEAGGM---HTVCLSQSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQ 118
Query: 110 YKIKKAGAGRSHTVVVTEDGNSLAFG--WNKHGQLGS-GSIRNEIEPSPVRCLVSEVTAT 166
K+ + AG SHT +TEDG +G + +G +G ++ + P V+ L + V
Sbjct: 119 EKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQ-LDAPVVKV 177
Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
A G D V L++ + G + GQLG + + L PR + +
Sbjct: 178 ASGNDHLVMLTN--DGDLYTLGCGEQGQLGR-VPELFANRGGRQGLGRLLVPRCVLLKSR 234
Query: 227 AGETIVKVA---CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
V+ CG T A+ +G+VY +G Y +LG ++P+ + F+ N
Sbjct: 235 GTRGRVRFQDAFCGAYFTFAISREGHVYGFGLSNYHQLGTPGTGSCFIPQNLTSFK--NS 292
Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLSGW-NLRC 335
S G ++ C G+ Y G+ L ++ P + L ++ C
Sbjct: 293 TKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPVVSSVAC 352
Query: 336 MDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
++ + V D +WG +LG G S + LE V++V+ G H
Sbjct: 353 --GASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLTVSSGGQH 410
Query: 396 SLVIV 400
++++V
Sbjct: 411 TVLLV 415
Score = 58.5 bits (140), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 132/341 (38%), Gaps = 47/341 (13%)
Query: 77 GRCYTWGRNERGQLGHGDKI-QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G T G+ + GQLG G+ + +R +P +V L + +A AG HTV +++ G +FG
Sbjct: 35 GLVLTLGQGDVGQLGLGESVLERKKPALVPLLQD--VVQAEAGGMHTVCLSQSGQVYSFG 92
Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
N G LG + E P + + E D + +G L
Sbjct: 93 CNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFL---------W 143
Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
G DN + + L + + +VKVA G +H V + + G +YT G
Sbjct: 144 GSFRDN-----NGVIGLLEPMKKSMVPVQVQLDAPVVKVASGNDHLVMLTNDGDLYTLGC 198
Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVI---------------SAGSVNSSCT 300
G G+LG + E R +L P V+ G+ +
Sbjct: 199 GEQGQLG---RVPELFANRGGRQGLGRLLVPRCVLLKSRGTRGRVRFQDAFCGAYFTFAI 255
Query: 301 AGGGQLYMWG-----KLKNNGDDWMY-PKPLMDLSGWNLRCMD-SGNMHHFVGADS--SC 351
+ G +Y +G +L G + P+ L + SG HH V DS
Sbjct: 256 SREGHVYGFGLSNYHQLGTPGTGSCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKA 315
Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
S G A+YG LG G G + ++P + L V SVACG
Sbjct: 316 YSLGRAEYGRLGLGE-GAEEKSIPTLISRLP--VVSSVACG 353
Score = 40.4 bits (93), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 59/140 (42%), Gaps = 23/140 (16%)
Query: 178 SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
+ E +L G GQLG G K + V L + +V+ G
Sbjct: 31 NTEPGLVLTLGQGDVGQLGLGESVLERKKPALVPLL---------------QDVVQAEAG 75
Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHRE--QKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
HTV + G VY++G G LG + E VP +V++ ++ +SAG
Sbjct: 76 GMHTVCLSQSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEK------VVQVSAGDS 129
Query: 296 NSSCTAGGGQLYMWGKLKNN 315
+++ G++++WG ++N
Sbjct: 130 HTAALTEDGRVFLWGSFRDN 149
Score = 40.0 bits (92), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 58/136 (42%), Gaps = 19/136 (13%)
Query: 119 RSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSS 178
RSH TE G L G GQLG G E + + L+ +V G TV LS
Sbjct: 28 RSHN---TEPGLVLTLGQGDVGQLGLGESVLERKKPALVPLLQDVVQAEAGGMHTVCLS- 83
Query: 179 VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGT 238
+ + + G G LG +D+SV+ E P + E +V+V+ G
Sbjct: 84 -QSGQVYSFGCNDEGALG---------RDTSVE-GSEMVPGKVELQ----EKVVQVSAGD 128
Query: 239 NHTVAVDSKGYVYTWG 254
+HT A+ G V+ WG
Sbjct: 129 SHTAALTEDGRVFLWG 144
>sp|Q54X24|RCCDA_DICDI RCC1 domain-containing protein DDB_G0279253 OS=Dictyostelium
discoideum GN=DDB_G0279253 PE=4 SV=1
Length = 512
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 20/131 (15%)
Query: 43 NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH---------- 92
NL P + L IR V+ C H +A+ E Y WG N+ GQL +
Sbjct: 216 NLNEPKLIEILFNNKIRIVSVSCGMRHSIALSSENDVYGWGCNKFGQLSNLIDGNSLKSN 275
Query: 93 ---------GDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED-GNSLAFGWNKHGQL 142
D + +D P +++ ++ KI + G HT+++ + N L+FG NK GQL
Sbjct: 276 NNNNNINDIADPMVQDSPKLINFKNEIKIIQISCGFQHTLLLDINFKNVLSFGQNKFGQL 335
Query: 143 GSGSIRNEIEP 153
G+G+ ++ P
Sbjct: 336 GNGNFIDQSNP 346
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 56/134 (41%), Gaps = 28/134 (20%)
Query: 38 GALDGNLVSPTRLRPLVGVDIRFVAAGCVS--CHCVAVDVEGRCYTWGRNERGQLGHGDK 95
G D ++ +PT + P G + V CH + + G YT+G N+ GQLG
Sbjct: 17 GNTDDSVSTPTLVLPPDGKKDYEIVNDIVGGGCHSMMIIDNGDLYTFGSNDSGQLGINSN 76
Query: 96 ------------------------IQRDRPTIVS--ELSKYKIKKAGAGRSHTVVVTEDG 129
+ PTI++ +++ KIK G +H++ +G
Sbjct: 77 EQQQQQQQQQQQQQQQQQQQQQQQQYQTIPTILNYFKINSIKIKNCSGGWAHSLACDNNG 136
Query: 130 NSLAFGWNKHGQLG 143
N ++G N HGQLG
Sbjct: 137 NIYSWGSNSHGQLG 150
Score = 37.0 bits (84), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 219 RPRAIAALAGETI--VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
P+ I L I V V+CG H++A+ S+ VY WG +G+L +
Sbjct: 219 EPKLIEILFNNKIRIVSVSCGMRHSIALSSENDVYGWGCNKFGQLSN 265
Score = 35.4 bits (80), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
Query: 78 RCYTWGRNERGQLGHGDKIQR-DRPTIVSELSKYK----IKKAGAGRSHTVVVTEDGNSL 132
+ Y+WG GQLG G+ PT+V K + G H++++ ++G+
Sbjct: 2 KIYSWGSGNLGQLGIGNTDDSVSTPTLVLPPDGKKDYEIVNDIVGGGCHSMMIIDNGDLY 61
Query: 133 AFGWNKHGQLGSGS 146
FG N GQLG S
Sbjct: 62 TFGSNDSGQLGINS 75
>sp|Q9P2D0|IBTK_HUMAN Inhibitor of Bruton tyrosine kinase OS=Homo sapiens GN=IBTK PE=1
SV=3
Length = 1353
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 102/240 (42%), Gaps = 28/240 (11%)
Query: 80 YTWGRNERGQLGHGDKIQRDRPTIVSELSK--YKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
YTWG N LGHG + + P +V S+ IK+ + H+V +++ G G
Sbjct: 145 YTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHG 204
Query: 138 KHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
G+LG G + + P V L + A D TV L+ E + GL + QLG
Sbjct: 205 PGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLT--EDGCVYTFGLNIFHQLG 262
Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAA--LAGETIVKVACGTNHTVAVDSKGYVYTWG 254
SS + PR I A L G TI+ VA G HTV + ++ VYT G
Sbjct: 263 ------IIPPPSSCNV-------PRQIQAKYLKGRTIIGVAAGRFHTV-LWTREAVYTMG 308
Query: 255 FGGYGRLG----HREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
G G+LG +K PR+V ++ ++++A + C G +Y+
Sbjct: 309 LNG-GQLGCLLDPNGEKCVTAPRQVSALHHKDI--ALSLVAASDGATVCVTTRGDIYLLA 365
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Query: 69 HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
H V + +G+ YT G G+LGHGD+ P +V L+ + + A + HTVV+TED
Sbjct: 188 HSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTED 247
Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
G FG N QLG I P P C V
Sbjct: 248 GCVYTFGLNIFHQLG-------IIPPPSSCNV 272
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 74/158 (46%), Gaps = 12/158 (7%)
Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
VYTWG LGH Q + P VD+F R+ + + V+ +S + GQ+Y
Sbjct: 144 VYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLC--KFHSVFLSQKGQVYTC 201
Query: 310 GK----LKNNGDDW--MYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGEL 362
G +GD+ + P+ + L+G N + + H V + C+ ++G + +L
Sbjct: 202 GHGPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQL 261
Query: 363 GYGPYGQKSSAMPKKVD--ILEGMHVISVACGYGHSLV 398
G P S +P+++ L+G +I VA G H+++
Sbjct: 262 GIIP-PPSSCNVPRQIQAKYLKGRTIIGVAAGRFHTVL 298
>sp|P23800|RCC1_MESAU Regulator of chromosome condensation OS=Mesocricetus auratus
GN=RCC1 PE=1 SV=1
Length = 421
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 148/365 (40%), Gaps = 25/365 (6%)
Query: 50 LRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSK 109
L PL+ ++ A G H V ++ G+ Y++G N+ G LG ++ +
Sbjct: 62 LVPLLQDVVQAEAGGM---HTVCLNQSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQ 118
Query: 110 YKIKKAGAGRSHTVVVTEDGNSLAFG--WNKHGQLGS-GSIRNEIEPSPVRCLVSEVTAT 166
K+ + AG SHT +TEDG +G + +G +G ++ + P V+ L V
Sbjct: 119 EKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQ-LDMPVVKV 177
Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
A G D V L++ + G + GQLG + + L P+ + +
Sbjct: 178 ASGNDHLVMLTT--DGDLYTLGCGEQGQLGR-VPELFANRGGRQGLERLLVPKCVLLKSR 234
Query: 227 AGETIVKVA---CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
V+ CG T A+ +G+VY +G Y +LG ++P+ + F+ N
Sbjct: 235 GSRGRVRFQDAFCGAYLTFAISREGHVYGFGLSNYHQLGTPGTASCFIPQNLTSFK--NS 292
Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLSGW-NLRC 335
S G ++ C G+ Y G+ L ++ P + L ++ C
Sbjct: 293 TKSWVGFSGGQHHTICMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPVVSSVAC 352
Query: 336 MDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
++ + V D +WG +LG G S + LE V++V+ G H
Sbjct: 353 --GASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLTVSSGGQH 410
Query: 396 SLVIV 400
++++V
Sbjct: 411 TVLLV 415
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 129/341 (37%), Gaps = 47/341 (13%)
Query: 77 GRCYTWGRNERGQLGHGDKI-QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
G T G+ + GQLG G+ + +R +P +V L + +A AG HTV + + G +FG
Sbjct: 35 GLVLTLGQGDVGQLGLGESVLERKKPALVPLLQD--VVQAEAGGMHTVCLNQSGQVYSFG 92
Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
N G LG + E P + + E D + +G L
Sbjct: 93 CNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFL---------W 143
Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
G DN + + L + + +VKVA G +H V + + G +YT G
Sbjct: 144 GSFRDN-----NGVIGLLEPMKKSMVPVQVQLDMPVVKVASGNDHLVMLTTDGDLYTLGC 198
Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVI-----SAGSVNSSCTAGGGQL---- 306
G G+LG + E R +L P+ V+ S G V G L
Sbjct: 199 GEQGQLG---RVPELFANRGGRQGLERLLVPKCVLLKSRGSRGRVRFQDAFCGAYLTFAI 255
Query: 307 ----YMWGKLKNNGDDWMYPKPLMDLSGWNLRCMD---------SGNMHHFVGADS--SC 351
+++G +N P NL SG HH + DS
Sbjct: 256 SREGHVYGFGLSNYHQLGTPGTASCFIPQNLTSFKNSTKSWVGFSGGQHHTICMDSEGKA 315
Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
S G A+YG LG G G + ++P + L V SVACG
Sbjct: 316 YSLGRAEYGRLGLGE-GAEEKSIPTLISRLP--VVSSVACG 353
Score = 38.9 bits (89), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 57/135 (42%), Gaps = 16/135 (11%)
Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSV 179
SH TE G L G GQLG G E + + L+ +V G TV L+
Sbjct: 26 SHRSHKTEPGLVLTLGQGDVGQLGLGESVLERKKPALVPLLQDVVQAEAGGMHTVCLN-- 83
Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
+ + + G G LG +D+SV+ E P + E +V+V+ G +
Sbjct: 84 QSGQVYSFGCNDEGALG---------RDTSVE-GSEMVPGKVELQ----EKVVQVSAGDS 129
Query: 240 HTVAVDSKGYVYTWG 254
HT A+ G V+ WG
Sbjct: 130 HTAALTEDGRVFLWG 144
>sp|Q9CYF5|WBS16_MOUSE Williams-Beuren syndrome chromosomal region 16 protein homolog
OS=Mus musculus GN=Wbscr16 PE=2 SV=1
Length = 461
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 136/352 (38%), Gaps = 62/352 (17%)
Query: 83 GRNERGQLG-HGDKIQRDR-----------PTIVSELSKYKIKKAGAGRSHTVVVTEDGN 130
G N+ QLG H + + R P + + K+ + GR+H++V+T+
Sbjct: 132 GLNKDSQLGFHRSRKDKTRGYEYVLEPSPVPLPLDRPQETKVLQVSCGRAHSLVLTDREG 191
Query: 131 SLAFGWNKHGQLGSGSIRNEIEPSP-----VRCLVSEVTATACGADFTVWLSSVEGASIL 185
+ G N HGQ G + +E+ ++ +V CG D +++L+ + +
Sbjct: 192 VFSMGNNSHGQCGRKVVEDEVYSESHKVHRMQDFDGQVVQVVCGQDHSLFLT--DKGEVY 249
Query: 186 NAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVD 245
+ G GQ G G YN + KL + LAG T+V+VA + +A+
Sbjct: 250 SCGWGADGQTGLG---HYNITSTPSKLGGD----------LAGVTVVQVATYGDCCLALS 296
Query: 246 SKGYVYTWGFGGYGRLGHREQKDEW-VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
+ G V+ WG Y +L + VPR + V ++ G + G
Sbjct: 297 ADGGVFGWGNSEYLQLASVTDSTQVNVPRCLPFSGVGKV----KQVACGGTGCAVLNAEG 352
Query: 305 QLYMWG--------KLKNNGDDWMYPKPLMDLSGWN-------LRCMDSGNMHHFVGADS 349
+++WG KL M P L L+ +N +RC + HF +
Sbjct: 353 HVFVWGYGILGKGPKLLETAIPEMIPPTLFGLTEFNPEVQVSQIRC----GLSHFAALTN 408
Query: 350 S--CISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
WG G LG G + P +V + + VACG H + +
Sbjct: 409 KGELFVWGKNIRGCLGIGRL--EDQYFPWRVTMPG--EPVDVACGVDHMVTL 456
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 91/231 (39%), Gaps = 27/231 (11%)
Query: 57 DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKA 115
D + V C H + + +G Y+ G GQ G G P+ + +L+ + +
Sbjct: 226 DGQVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTPSKLGGDLAGVTVVQV 285
Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL----VSEVTATACGAD 171
+ ++ DG FGW L S+ + + + RCL V +V ACG
Sbjct: 286 ATYGDCCLALSADGG--VFGWGNSEYLQLASVTDSTQVNVPRCLPFSGVGKVKQVACGGT 343
Query: 172 FTVWLSSVEGASILNAG----LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALA 227
G ++LNA + YG LG G K + P +
Sbjct: 344 ---------GCAVLNAEGHVFVWGYGILGKGP------KLLETAIPEMIPPTLFGLTEFN 388
Query: 228 GETIV-KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
E V ++ CG +H A+ +KG ++ WG G LG +D++ P RV +
Sbjct: 389 PEVQVSQIRCGLSHFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRVTM 439
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.135 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 170,533,755
Number of Sequences: 539616
Number of extensions: 7707115
Number of successful extensions: 17822
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 16398
Number of HSP's gapped (non-prelim): 506
length of query: 414
length of database: 191,569,459
effective HSP length: 120
effective length of query: 294
effective length of database: 126,815,539
effective search space: 37283768466
effective search space used: 37283768466
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)