Query 015058
Match_columns 414
No_of_seqs 116 out of 1450
Neff 5.9
Searched_HMMs 29240
Date Mon Mar 25 05:55:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015058.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015058hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fro_A GLGA glycogen synthase; 100.0 3E-34 1E-38 284.9 29.5 305 20-399 23-365 (439)
2 3c48_A Predicted glycosyltrans 100.0 1.6E-33 5.3E-38 282.3 34.3 299 21-399 48-360 (438)
3 3okp_A GDP-mannose-dependent a 100.0 8E-34 2.7E-38 278.4 30.1 303 1-399 1-314 (394)
4 2r60_A Glycosyl transferase, g 100.0 2.2E-32 7.5E-37 280.6 31.1 302 22-398 40-392 (499)
5 2jjm_A Glycosyl transferase, g 100.0 1.5E-31 5.1E-36 265.2 27.0 280 22-399 34-319 (394)
6 1rzu_A Glycogen synthase 1; gl 100.0 1.2E-30 4.1E-35 265.9 23.3 225 99-398 128-399 (485)
7 2iw1_A Lipopolysaccharide core 100.0 1.3E-31 4.4E-36 261.4 15.2 278 21-399 20-305 (374)
8 2qzs_A Glycogen synthase; glyc 100.0 2.2E-30 7.5E-35 264.0 23.2 224 100-398 128-400 (485)
9 2gek_A Phosphatidylinositol ma 100.0 2E-30 6.9E-35 255.7 21.7 274 20-398 40-317 (406)
10 2x6q_A Trehalose-synthase TRET 100.0 1.9E-29 6.4E-34 251.8 18.1 213 99-398 124-349 (416)
11 3s28_A Sucrose synthase 1; gly 100.0 3.1E-29 1.1E-33 276.0 19.7 306 25-398 320-698 (816)
12 2iuy_A Avigt4, glycosyltransfe 100.0 2.5E-28 8.4E-33 237.6 19.9 232 22-399 37-276 (342)
13 3oy2_A Glycosyltransferase B73 100.0 2.8E-27 9.7E-32 235.4 23.9 203 100-398 80-307 (413)
14 1f0k_A MURG, UDP-N-acetylgluco 99.9 1.4E-26 4.7E-31 226.3 19.3 259 23-399 25-285 (364)
15 3vue_A GBSS-I, granule-bound s 99.9 4.4E-25 1.5E-29 232.7 31.8 227 100-398 152-435 (536)
16 2hy7_A Glucuronosyltransferase 99.9 2.1E-26 7.2E-31 233.1 14.8 288 6-403 14-332 (406)
17 2x0d_A WSAF; GT4 family, trans 99.9 1.4E-23 4.8E-28 213.8 22.8 197 100-395 131-345 (413)
18 3beo_A UDP-N-acetylglucosamine 99.9 3.4E-24 1.2E-28 209.7 16.3 208 99-396 93-309 (375)
19 1vgv_A UDP-N-acetylglucosamine 99.9 6E-23 2.1E-27 201.9 14.8 214 99-398 84-312 (384)
20 2vsy_A XCC0866; transferase, g 99.9 4E-23 1.4E-27 214.8 12.7 199 100-397 281-492 (568)
21 1v4v_A UDP-N-acetylglucosamine 99.9 2.5E-22 8.7E-27 197.6 9.5 206 99-395 89-300 (376)
22 3nb0_A Glycogen [starch] synth 99.8 1.5E-19 5.1E-24 194.4 24.4 248 100-398 180-552 (725)
23 2xci_A KDO-transferase, 3-deox 99.8 9.6E-20 3.3E-24 182.7 19.8 192 100-398 110-313 (374)
24 3rhz_A GTF3, nucleotide sugar 99.8 1.2E-19 4.1E-24 181.4 19.3 196 98-399 71-275 (339)
25 1uqt_A Alpha, alpha-trehalose- 99.8 6.7E-19 2.3E-23 183.6 22.2 224 100-399 122-391 (482)
26 2bfw_A GLGA glycogen synthase; 99.8 1E-19 3.5E-24 163.5 13.9 106 260-398 38-149 (200)
27 3qhp_A Type 1 capsular polysac 99.8 3E-19 1E-23 156.2 12.6 104 258-395 2-106 (166)
28 2f9f_A First mannosyl transfer 99.7 3.6E-18 1.2E-22 152.6 10.3 112 251-398 17-131 (177)
29 3dzc_A UDP-N-acetylglucosamine 99.7 2.7E-16 9.3E-21 159.1 18.2 291 4-394 25-332 (396)
30 3t5t_A Putative glycosyltransf 99.7 5.6E-16 1.9E-20 162.2 19.7 217 101-398 149-408 (496)
31 3otg_A CALG1; calicheamicin, T 99.7 4E-15 1.4E-19 147.7 19.3 270 20-398 36-338 (412)
32 3ot5_A UDP-N-acetylglucosamine 99.6 3.8E-15 1.3E-19 151.2 18.1 205 99-394 112-326 (403)
33 3s2u_A UDP-N-acetylglucosamine 99.6 2.8E-14 9.5E-19 142.5 22.2 263 18-396 12-280 (365)
34 2iyf_A OLED, oleandomycin glyc 99.5 2.8E-13 9.7E-18 135.7 20.9 97 256-398 231-329 (430)
35 3ia7_A CALG4; glycosysltransfe 99.5 3.3E-12 1.1E-16 125.7 20.8 95 255-396 229-325 (402)
36 3tsa_A SPNG, NDP-rhamnosyltran 99.4 3.3E-13 1.1E-17 133.4 11.4 97 255-396 216-314 (391)
37 3oti_A CALG3; calicheamicin, T 99.4 9.6E-13 3.3E-17 130.9 14.8 94 255-394 230-325 (398)
38 4fzr_A SSFS6; structural genom 99.4 6E-13 2.1E-17 132.2 13.3 93 256-397 226-329 (398)
39 3rsc_A CALG2; TDP, enediyne, s 99.4 3.2E-11 1.1E-15 120.0 21.7 125 4-137 20-150 (415)
40 4hwg_A UDP-N-acetylglucosamine 99.3 4E-11 1.4E-15 121.2 15.5 206 99-396 92-309 (385)
41 2p6p_A Glycosyl transferase; X 99.2 4.7E-11 1.6E-15 117.7 12.8 93 256-398 209-309 (384)
42 2iya_A OLEI, oleandomycin glyc 99.0 2.9E-08 9.9E-13 99.3 21.1 95 256-397 254-350 (424)
43 3h4t_A Glycosyltransferase GTF 98.9 3.4E-07 1.2E-11 91.7 23.6 120 6-137 2-126 (404)
44 2yjn_A ERYCIII, glycosyltransf 98.8 1.2E-07 4E-12 95.8 18.4 95 255-398 265-365 (441)
45 1iir_A Glycosyltransferase GTF 98.8 6.9E-07 2.4E-11 89.4 21.4 91 257-398 238-331 (415)
46 3q3e_A HMW1C-like glycosyltran 98.6 4.7E-06 1.6E-10 89.3 23.1 111 252-397 434-550 (631)
47 1rrv_A Glycosyltransferase GTF 98.6 7.5E-06 2.6E-10 81.8 21.7 90 257-397 237-331 (416)
48 4amg_A Snogd; transferase, pol 98.5 5.9E-07 2E-11 88.3 12.6 99 254-398 234-334 (400)
49 2o6l_A UDP-glucuronosyltransfe 98.4 5.2E-07 1.8E-11 79.2 7.6 92 256-397 20-115 (170)
50 3tov_A Glycosyl transferase fa 97.9 0.0019 6.4E-08 63.8 21.6 106 252-395 180-287 (349)
51 1l5w_A Maltodextrin phosphoryl 97.7 0.0014 4.8E-08 71.9 18.6 116 253-394 522-656 (796)
52 2c4m_A Glycogen phosphorylase; 97.5 0.0057 2E-07 67.1 20.5 119 253-394 512-646 (796)
53 4gyw_A UDP-N-acetylglucosamine 97.0 0.0062 2.1E-07 66.2 13.7 113 248-395 514-629 (723)
54 2pq6_A UDP-glucuronosyl/UDP-gl 96.8 0.14 4.9E-06 52.3 21.7 44 342-396 354-399 (482)
55 1psw_A ADP-heptose LPS heptosy 96.8 0.0035 1.2E-07 60.5 8.9 103 255-395 178-287 (348)
56 3hbm_A UDP-sugar hydrolase; PS 96.6 0.0069 2.4E-07 58.7 9.2 66 318-396 186-252 (282)
57 2c1x_A UDP-glucose flavonoid 3 96.6 0.22 7.6E-06 50.7 21.0 44 342-396 326-371 (456)
58 3l7i_A Teichoic acid biosynthe 96.5 0.015 5E-07 62.8 12.3 190 123-394 432-640 (729)
59 2acv_A Triterpene UDP-glucosyl 96.3 1.1 3.7E-05 45.6 27.6 99 256-396 275-378 (463)
60 2gj4_A Glycogen phosphorylase, 96.2 0.072 2.4E-06 58.7 15.1 128 253-406 546-702 (824)
61 3hbf_A Flavonoid 3-O-glucosylt 95.8 0.5 1.7E-05 48.4 19.1 46 342-396 328-373 (454)
62 2vch_A Hydroquinone glucosyltr 95.4 2.7 9.2E-05 42.9 26.3 43 343-396 341-385 (480)
63 2jzc_A UDP-N-acetylglucosamine 95.4 0.027 9.3E-07 52.8 7.0 45 342-396 115-160 (224)
64 2gt1_A Lipopolysaccharide hept 93.7 0.099 3.4E-06 50.0 6.6 100 257-395 178-279 (326)
65 3llv_A Exopolyphosphatase-rela 62.2 50 0.0017 26.8 9.4 127 8-184 8-134 (141)
66 2k6g_A Replication factor C su 61.2 16 0.00054 30.1 5.9 72 305-393 24-97 (109)
67 3geb_A EYES absent homolog 2; 56.1 11 0.00037 36.1 4.5 45 314-365 228-272 (274)
68 3gd5_A Otcase, ornithine carba 56.1 80 0.0027 30.8 11.0 86 104-204 51-140 (323)
69 2ebu_A Replication factor C su 55.6 20 0.0007 29.7 5.7 73 304-393 13-87 (112)
70 3fwz_A Inner membrane protein 48.9 99 0.0034 25.2 9.1 127 8-184 9-136 (140)
71 1fy2_A Aspartyl dipeptidase; s 46.9 42 0.0014 30.7 6.9 73 317-393 32-118 (229)
72 1vl6_A Malate oxidoreductase; 45.2 46 0.0016 33.4 7.4 75 314-392 190-290 (388)
73 3l4b_C TRKA K+ channel protien 38.8 52 0.0018 29.1 6.1 128 8-185 2-131 (218)
74 1zud_1 Adenylyltransferase THI 37.2 44 0.0015 30.9 5.5 73 329-405 85-160 (251)
75 1p9l_A Dihydrodipicolinate red 37.1 61 0.0021 30.1 6.5 72 318-396 2-77 (245)
76 3zqu_A Probable aromatic acid 34.0 54 0.0018 30.0 5.4 40 1-42 1-40 (209)
77 4f3y_A DHPR, dihydrodipicolina 33.7 35 0.0012 32.3 4.3 77 316-397 7-106 (272)
78 3ty2_A 5'-nucleotidase SURE; s 32.5 44 0.0015 31.8 4.7 38 4-43 9-47 (261)
79 2g1u_A Hypothetical protein TM 31.0 1.9E+02 0.0066 23.7 8.2 33 7-43 20-52 (155)
80 1jw9_B Molybdopterin biosynthe 30.5 62 0.0021 29.7 5.4 74 329-405 88-163 (249)
81 4f2g_A Otcase 1, ornithine car 30.3 2.2E+02 0.0076 27.4 9.4 86 104-203 48-136 (309)
82 4h31_A Otcase, ornithine carba 27.7 3E+02 0.01 27.0 10.0 87 104-204 73-162 (358)
83 3ijp_A DHPR, dihydrodipicolina 27.6 43 0.0015 32.1 3.8 77 316-397 21-121 (288)
84 1vi6_A 30S ribosomal protein S 26.9 66 0.0022 29.5 4.7 73 317-394 69-144 (208)
85 1i1q_B Anthranilate synthase c 26.9 2.1E+02 0.0072 24.7 8.0 69 324-393 9-81 (192)
86 3slg_A PBGP3 protein; structur 26.6 91 0.0031 29.4 5.9 59 1-62 19-77 (372)
87 3vnd_A TSA, tryptophan synthas 26.2 2.6E+02 0.0087 26.3 8.9 77 317-393 124-211 (267)
88 3tpf_A Otcase, ornithine carba 26.1 2.8E+02 0.0096 26.7 9.3 116 161-374 86-227 (307)
89 3r7f_A Aspartate carbamoyltran 25.9 3.2E+02 0.011 26.3 9.6 110 161-367 86-209 (304)
90 4hcj_A THIJ/PFPI domain protei 25.8 53 0.0018 28.8 3.8 42 1-43 4-45 (177)
91 1vlv_A Otcase, ornithine carba 25.6 4.3E+02 0.015 25.6 10.6 116 161-374 108-249 (325)
92 1psw_A ADP-heptose LPS heptosy 25.2 88 0.003 29.2 5.5 55 6-62 2-58 (348)
93 1ygp_A Yeast glycogen phosphor 25.1 7.4E+02 0.025 27.5 14.5 121 255-395 598-740 (879)
94 4g65_A TRK system potassium up 24.4 1.7E+02 0.0057 29.5 7.7 135 5-186 2-141 (461)
95 3l4e_A Uncharacterized peptida 24.4 1.1E+02 0.0038 27.4 5.8 79 315-394 28-119 (206)
96 2q5c_A NTRC family transcripti 24.1 3.7E+02 0.013 23.6 9.2 136 10-195 33-169 (196)
97 2a9f_A Putative malic enzyme ( 23.9 97 0.0033 31.2 5.6 77 313-393 185-286 (398)
98 4fyk_A Deoxyribonucleoside 5'- 23.8 2E+02 0.0068 24.9 7.0 37 357-395 64-101 (152)
99 4amu_A Ornithine carbamoyltran 23.7 4.3E+02 0.015 26.0 10.3 88 104-204 74-163 (365)
100 3lkv_A Uncharacterized conserv 23.2 4.3E+02 0.015 24.2 13.4 69 328-398 158-230 (302)
101 1oth_A Protein (ornithine tran 23.1 5.1E+02 0.018 24.9 11.5 87 104-204 49-138 (321)
102 4dzz_A Plasmid partitioning pr 22.9 2E+02 0.0069 24.2 7.0 27 17-44 15-41 (206)
103 3j20_B 30S ribosomal protein S 22.9 74 0.0025 29.0 4.2 72 317-393 65-139 (202)
104 4b4o_A Epimerase family protei 22.8 62 0.0021 29.6 3.8 35 7-44 1-35 (298)
105 3kcq_A Phosphoribosylglycinami 22.6 1.3E+02 0.0044 27.5 5.8 59 1-62 5-65 (215)
106 4gqa_A NAD binding oxidoreduct 22.5 1.7E+02 0.0059 28.4 7.2 55 328-393 69-125 (412)
107 1xiq_A Nucleoside diphosphate 22.5 1.6E+02 0.0056 25.6 6.2 59 329-400 27-87 (157)
108 1l7b_A DNA ligase; BRCT, autos 22.1 81 0.0028 24.9 3.8 62 314-393 8-70 (92)
109 1tvm_A PTS system, galactitol- 22.0 1.1E+02 0.0038 24.7 4.8 45 319-367 25-75 (113)
110 1nhk_R Nucleoside diphosphate 21.5 1.6E+02 0.0056 25.1 5.9 60 328-400 19-80 (144)
111 3en0_A Cyanophycinase; serine 21.4 4.7E+02 0.016 24.7 9.8 65 329-393 74-150 (291)
112 1qv9_A F420-dependent methylen 21.4 4.4E+02 0.015 24.9 9.1 36 100-135 63-99 (283)
113 2phj_A 5'-nucleotidase SURE; S 21.3 2.1E+02 0.0073 26.8 7.1 54 7-62 2-58 (251)
114 2vxb_A DNA repair protein RHP9 21.1 1E+02 0.0034 28.4 4.8 26 315-340 4-33 (241)
115 3vot_A L-amino acid ligase, BL 21.1 5.4E+02 0.018 24.8 10.5 38 1-44 1-39 (425)
116 2hur_A NDK, nucleoside diphosp 20.8 1.7E+02 0.0059 24.9 5.9 60 328-400 19-80 (142)
117 1e2b_A Enzyme IIB-cellobiose; 20.8 1.2E+02 0.0043 24.2 4.8 45 319-367 7-56 (106)
118 4ekn_B Aspartate carbamoyltran 20.8 4.1E+02 0.014 25.4 9.3 105 161-362 91-202 (306)
119 4aaj_A N-(5'-phosphoribosyl)an 20.8 4.1E+02 0.014 24.2 8.9 85 321-407 74-165 (228)
120 3i6i_A Putative leucoanthocyan 20.1 2.2E+02 0.0076 26.5 7.2 53 7-62 11-68 (346)
121 2qip_A Protein of unknown func 20.0 1.7E+02 0.0059 24.9 5.9 49 315-368 109-159 (165)
No 1
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=100.00 E-value=3e-34 Score=284.86 Aligned_cols=305 Identities=14% Similarity=0.034 Sum_probs=211.2
Q ss_pred HHHHHHHHHHhhCCCcEEEEecCCCCCCccc-----------------ccCCCeEEEEeecCCCCCC-CCCC-chHH-HH
Q 015058 20 RMQYQALSLARQMSLEVDVVAYGGSKPHAAI-----------------LEHPSIHIHTMTQWPTIPR-GLPK-VLKP-VL 79 (414)
Q Consensus 20 r~~~~a~~La~~~g~eV~vv~~~~~~~~~~~-----------------~~~~~i~i~~v~~~~~~~~-~~~~-~~~~-~~ 79 (414)
.+...+..|+++ ||+|+|+|.......... ...+++++++++. ....+ .... .... ..
T Consensus 23 ~~~~la~~L~~~-G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~-~~~~~~~~~~~~~~~~~~ 100 (439)
T 3fro_A 23 ALTAISEALASL-GHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRIGG-GLLDSEDVYGPGWDGLIR 100 (439)
T ss_dssp HHHHHHHHHHHT-TCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEEEES-GGGGCSSTTCSHHHHHHH
T ss_pred HHHHHHHHHHHC-CCeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEEEecc-hhccccccccCCcchhhh
Confidence 355667788886 999999997654321110 0457999999983 11111 0000 0111 22
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhh-hccCCCcHH---HHH
Q 015058 80 LLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLS-LSLGRRSHF---VSI 155 (414)
Q Consensus 80 ~l~k~l~~~~~l~~~l~~k~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~-~~~~~~~~~---~~i 155 (414)
...........++..++.+..+||+||+|++ ....++.++++..++|+|+++|+....... ..+...... ...
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~---~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~ 177 (439)
T 3fro_A 101 KAVTFGRASVLLLNDLLREEPLPDVVHFHDW---HTVFAGALIKKYFKIPAVFTIHRLNKSKLPAFYFHEAGLSELAPYP 177 (439)
T ss_dssp HHHHHHHHHHHHHHHHTTTSCCCSEEEEESG---GGHHHHHHHHHHHCCCEEEEESCCCCCCEEHHHHHHTTCGGGCCSS
T ss_pred hhHHHHHHHHHHHHHHhccCCCCeEEEecch---hhhhhHHHHhhccCCCEEEEecccccccCchHHhCccccccccccc
Confidence 2222222222233333223579999999986 555666677777899999999997421000 000000000 000
Q ss_pred HHHHHHHHhccCCEEEEeCHHHHHHHHHhh---CCcEEEecCC-CCCCcCCC-----ChHHHHHHHHHhhhhccCCCCcc
Q 015058 156 YRWIEKYYGKMANGCLCVTQAMQHELAQNW---GIKATVLYDQ-PPEFFHPT-----SLEEKHELFCRLNKILHQPLGVQ 226 (414)
Q Consensus 156 ~~~~Ek~~~k~ad~ii~vS~~~~~~l~~~~---gi~i~vI~n~-~~~~f~p~-----~~~~~~~l~~~l~~~~~~~~~~~ 226 (414)
..++++...+.||.++|+|+.+++.....+ ..++.+|||+ |.+.|.|. ....+.+++++++
T Consensus 178 ~~~~~~~~~~~ad~ii~~S~~~~~~~~~~~~~~~~~i~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~---------- 247 (439)
T 3fro_A 178 DIDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFG---------- 247 (439)
T ss_dssp EECHHHHHHHHCSEEEESCHHHHHHTHHHHGGGTTSEEECCCCCCTTTSCGGGSCSCHHHHHHHHHHHHT----------
T ss_pred eeeHhhhhhhhccEEEecCHHHHHHHhhhhhhcCCceeecCCCCCchhcCcccccchhhhhHHHHHHHcC----------
Confidence 115677888999999999999998855533 2349999999 88888775 2234556665543
Q ss_pred ccccCCCCCCCCccceeeeccccccccCCCCCeEEEEeccCC-CCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhh
Q 015058 227 DCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWT-PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKE 305 (414)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~vgrl~-~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~ 305 (414)
++++ .+++++||+. +.||++.+++|++.+.+
T Consensus 248 --------------------------~~~~--~~i~~~G~~~~~~Kg~~~li~a~~~l~~-------------------- 279 (439)
T 3fro_A 248 --------------------------MDEG--VTFMFIGRFDRGQKGVDVLLKAIEILSS-------------------- 279 (439)
T ss_dssp --------------------------CCSC--EEEEEECCSSCTTBCHHHHHHHHHHHHT--------------------
T ss_pred --------------------------CCCC--cEEEEEcccccccccHHHHHHHHHHHHh--------------------
Confidence 4444 5999999999 99999999999999875
Q ss_pred hcCCccCCC--CcEEEEEEcCCCCh--HHHHHHHHHcCCCcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhH
Q 015058 306 ISDGKQYLY--PRLLFIITGKGPDK--ESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKV 381 (414)
Q Consensus 306 ~~~~~~~~~--p~i~liI~G~G~~~--e~l~~~i~~l~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl 381 (414)
.. |+++|+|+|+|+.+ +.+++++++++ +.+.|.| +++.++++.+|++||++|+|+. .+++|+++
T Consensus 280 -------~~~~~~~~l~i~G~g~~~~~~~l~~~~~~~~-~~~~~~g-~~~~~~~~~~~~~adv~v~ps~---~e~~~~~~ 347 (439)
T 3fro_A 280 -------KKEFQEMRFIIIGKGDPELEGWARSLEEKHG-NVKVITE-MLSREFVRELYGSVDFVIIPSY---FEPFGLVA 347 (439)
T ss_dssp -------SGGGGGEEEEEECCCCHHHHHHHHHHHHHCT-TEEEECS-CCCHHHHHHHHTTCSEEEECBS---CCSSCHHH
T ss_pred -------cccCCCeEEEEEcCCChhHHHHHHHHHhhcC-CEEEEcC-CCCHHHHHHHHHHCCEEEeCCC---CCCccHHH
Confidence 23 78999999999987 99999999999 7777876 9999999999999999998743 47899999
Q ss_pred HHHHHcCCeEEEeeeCCc
Q 015058 382 CYCWYSRYSLKLLWTCSV 399 (414)
Q Consensus 382 ~Eama~G~Pvi~s~~~~~ 399 (414)
+||||||+|||+++++|.
T Consensus 348 ~EAma~G~Pvi~s~~~~~ 365 (439)
T 3fro_A 348 LEAMCLGAIPIASAVGGL 365 (439)
T ss_dssp HHHHHTTCEEEEESSTHH
T ss_pred HHHHHCCCCeEEcCCCCc
Confidence 999999999999998653
No 2
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=100.00 E-value=1.6e-33 Score=282.26 Aligned_cols=299 Identities=15% Similarity=0.085 Sum_probs=208.0
Q ss_pred HHHHHHHHHhhCCCcEEEEecCCCCCCccc-ccCCCeEEEEeecCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHH-hhh
Q 015058 21 MQYQALSLARQMSLEVDVVAYGGSKPHAAI-LEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFL-CVK 98 (414)
Q Consensus 21 ~~~~a~~La~~~g~eV~vv~~~~~~~~~~~-~~~~~i~i~~v~~~~~~~~~~~~~~~~~~~l~k~l~~~~~l~~~l-~~k 98 (414)
+...+..|+++ ||+|+|+|.......... ...+++++++++. .......+. .....+..+... +... +.+
T Consensus 48 ~~~la~~L~~~-G~~V~v~~~~~~~~~~~~~~~~~~v~v~~~~~--~~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~ 119 (438)
T 3c48_A 48 ILSTATELAKQ-GIEVDIYTRATRPSQGEIVRVAENLRVINIAA--GPYEGLSKE-ELPTQLAAFTGG----MLSFTRRE 119 (438)
T ss_dssp HHHHHHHHHHT-TCEEEEEEECCCGGGCSEEEEETTEEEEEECC--SCSSSCCGG-GGGGGHHHHHHH----HHHHHHHH
T ss_pred HHHHHHHHHhc-CCEEEEEecCCCCCCcccccccCCeEEEEecC--CCccccchh-HHHHHHHHHHHH----HHHHHHhc
Confidence 44566777775 999999998754211111 2247899999873 221111111 111111111111 1111 222
Q ss_pred cCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCC-CcHHHHHHHHHHHHHhccCCEEEEeCHHH
Q 015058 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGR-RSHFVSIYRWIEKYYGKMANGCLCVTQAM 177 (414)
Q Consensus 99 ~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~-~~~~~~i~~~~Ek~~~k~ad~ii~vS~~~ 177 (414)
..+||+||+|.+ ....++.++++..++|+|+++|+..... ...+.. .........++|+++++.||.++|+|+.+
T Consensus 120 ~~~~Div~~~~~---~~~~~~~~~~~~~~~p~v~~~h~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~ 195 (438)
T 3c48_A 120 KVTYDLIHSHYW---LSGQVGWLLRDLWRIPLIHTAHTLAAVK-NSYRDDSDTPESEARRICEQQLVDNADVLAVNTQEE 195 (438)
T ss_dssp TCCCSEEEEEHH---HHHHHHHHHHHHHTCCEEEECSSCHHHH-SCC----CCHHHHHHHHHHHHHHHHCSEEEESSHHH
T ss_pred cCCCCEEEeCCc---cHHHHHHHHHHHcCCCEEEEecCCcccc-cccccccCCcchHHHHHHHHHHHhcCCEEEEcCHHH
Confidence 235999999975 4455566667777999999999974211 000111 11113344567889999999999999999
Q ss_pred HHHHHHhhCCc---EEEecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeecccccccc
Q 015058 178 QHELAQNWGIK---ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFL 253 (414)
Q Consensus 178 ~~~l~~~~gi~---i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 253 (414)
++.+.+.+|++ +.+|||+ |.+.|.|.+...+.+++++++ +
T Consensus 196 ~~~~~~~~g~~~~k~~vi~ngvd~~~~~~~~~~~~~~~r~~~~------------------------------------~ 239 (438)
T 3c48_A 196 MQDLMHHYDADPDRISVVSPGADVELYSPGNDRATERSRRELG------------------------------------I 239 (438)
T ss_dssp HHHHHHHHCCCGGGEEECCCCCCTTTSCCC----CHHHHHHTT------------------------------------C
T ss_pred HHHHHHHhCCChhheEEecCCccccccCCcccchhhhhHHhcC------------------------------------C
Confidence 99998877864 8999999 777787764333334555543 4
Q ss_pred CCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCC--cEEEEEEcC----CCC
Q 015058 254 KPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYP--RLLFIITGK----GPD 327 (414)
Q Consensus 254 ~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--~i~liI~G~----G~~ 327 (414)
++++ .+++++||+.++||++.+++|++.+.++ +| +++|+|+|+ |+.
T Consensus 240 ~~~~-~~i~~~G~~~~~Kg~~~li~a~~~l~~~---------------------------~p~~~~~l~i~G~~~~~g~~ 291 (438)
T 3c48_A 240 PLHT-KVVAFVGRLQPFKGPQVLIKAVAALFDR---------------------------DPDRNLRVIICGGPSGPNAT 291 (438)
T ss_dssp CSSS-EEEEEESCBSGGGCHHHHHHHHHHHHHH---------------------------CTTCSEEEEEECCBC-----
T ss_pred CCCC-cEEEEEeeecccCCHHHHHHHHHHHHhh---------------------------CCCcceEEEEEeCCCCCCcH
Confidence 4454 4899999999999999999999999863 45 799999999 999
Q ss_pred hHHHHHHHHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCCc
Q 015058 328 KESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCSV 399 (414)
Q Consensus 328 ~e~l~~~i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~~ 399 (414)
.+++++++++++++ +|.|+| +++.+|++.+|++||++|+++ ..+++|++++|||+||+|||+++++|.
T Consensus 292 ~~~l~~~~~~~~l~~~v~~~g-~~~~~~~~~~~~~adv~v~ps---~~e~~~~~~~Eama~G~PvI~~~~~~~ 360 (438)
T 3c48_A 292 PDTYRHMAEELGVEKRIRFLD-PRPPSELVAVYRAADIVAVPS---FNESFGLVAMEAQASGTPVIAARVGGL 360 (438)
T ss_dssp -CHHHHHHHHTTCTTTEEEEC-CCCHHHHHHHHHHCSEEEECC---SCCSSCHHHHHHHHTTCCEEEESCTTH
T ss_pred HHHHHHHHHHcCCCCcEEEcC-CCChHHHHHHHHhCCEEEECc---cccCCchHHHHHHHcCCCEEecCCCCh
Confidence 99999999999998 999997 999999999999999999864 347899999999999999999998753
No 3
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=100.00 E-value=8e-34 Score=278.45 Aligned_cols=303 Identities=13% Similarity=0.058 Sum_probs=222.7
Q ss_pred CCCCCEEEEEEeCCCCCChHHHHHHHHHHhh-CCCcEEEEecCCCCCC-cccccCCCeEEEEeecCCCCCCCCCCchHHH
Q 015058 1 MGRRGRACVVVLGDLGRSPRMQYQALSLARQ-MSLEVDVVAYGGSKPH-AAILEHPSIHIHTMTQWPTIPRGLPKVLKPV 78 (414)
Q Consensus 1 ~~~~~~~~v~~~~d~~~~~r~~~~a~~La~~-~g~eV~vv~~~~~~~~-~~~~~~~~i~i~~v~~~~~~~~~~~~~~~~~ 78 (414)
|+++.+++++.-.-.+..+|+...+..+++. .||+|+|++....... .......++++++++. ... . ..+...
T Consensus 1 M~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~-~~~~~~ 75 (394)
T 3okp_A 1 MSASRKTLVVTNDFPPRIGGIQSYLRDFIATQDPESIVVFASTQNAEEAHAYDKTLDYEVIRWPR--SVM--L-PTPTTA 75 (394)
T ss_dssp ---CCCEEEEESCCTTSCSHHHHHHHHHHTTSCGGGEEEEEECSSHHHHHHHHTTCSSEEEEESS--SSC--C-SCHHHH
T ss_pred CCCCceEEEEeCccCCccchHHHHHHHHHHHhcCCeEEEEECCCCccchhhhccccceEEEEccc--ccc--c-cchhhH
Confidence 6777777666654344568888888888886 5999999998764321 2233467899999883 211 1 122222
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCcEEEEeCCCCchHHHHHHHHHhhcCCe-EEEEEcCcchhhhhhccCCCcHHHHHHH
Q 015058 79 LLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSA-FIVDWHNFGYTLLSLSLGRRSHFVSIYR 157 (414)
Q Consensus 79 ~~l~k~l~~~~~l~~~l~~k~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~-~Iv~~H~~~~~l~~~~~~~~~~~~~i~~ 157 (414)
..+.+.+ +..+||+||++.+. +...++.+++ ..++| +|+++|+.... +. . ....+
T Consensus 76 ~~l~~~~------------~~~~~Dvv~~~~~~--~~~~~~~~~~-~~~~~~~i~~~h~~~~~-----~~-~---~~~~~ 131 (394)
T 3okp_A 76 HAMAEII------------REREIDNVWFGAAA--PLALMAGTAK-QAGASKVIASTHGHEVG-----WS-M---LPGSR 131 (394)
T ss_dssp HHHHHHH------------HHTTCSEEEESSCT--TGGGGHHHHH-HTTCSEEEEECCSTHHH-----HT-T---SHHHH
T ss_pred HHHHHHH------------HhcCCCEEEECCcc--hHHHHHHHHH-hcCCCcEEEEeccchhh-----hh-h---cchhh
Confidence 2222222 23799999999763 2233344444 45665 78899987431 11 1 12345
Q ss_pred HHHHHHhccCCEEEEeCHHHHHHHHHhhCC--cEEEecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCC
Q 015058 158 WIEKYYGKMANGCLCVTQAMQHELAQNWGI--KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGME 234 (414)
Q Consensus 158 ~~Ek~~~k~ad~ii~vS~~~~~~l~~~~gi--~i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 234 (414)
++++.+.+.+|.++|+|+.+++.+.+.++. ++.+|||+ |.+.|.|.....+.+++++++
T Consensus 132 ~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~~~~~~~~~~~~~~~~------------------ 193 (394)
T 3okp_A 132 QSLRKIGTEVDVLTYISQYTLRRFKSAFGSHPTFEHLPSGVDVKRFTPATPEDKSATRKKLG------------------ 193 (394)
T ss_dssp HHHHHHHHHCSEEEESCHHHHHHHHHHHCSSSEEEECCCCBCTTTSCCCCHHHHHHHHHHTT------------------
T ss_pred HHHHHHHHhCCEEEEcCHHHHHHHHHhcCCCCCeEEecCCcCHHHcCCCCchhhHHHHHhcC------------------
Confidence 566778899999999999999999988776 38999999 888888866556667776643
Q ss_pred CCCCccceeeeccccccccCCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCC
Q 015058 235 GQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLY 314 (414)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (414)
+++++ .+++++||+.+.||++.+++|++.+.++ .
T Consensus 194 ------------------~~~~~-~~i~~~G~~~~~Kg~~~li~a~~~l~~~---------------------------~ 227 (394)
T 3okp_A 194 ------------------FTDTT-PVIACNSRLVPRKGQDSLIKAMPQVIAA---------------------------R 227 (394)
T ss_dssp ------------------CCTTC-CEEEEESCSCGGGCHHHHHHHHHHHHHH---------------------------S
T ss_pred ------------------CCcCc-eEEEEEeccccccCHHHHHHHHHHHHhh---------------------------C
Confidence 44454 4899999999999999999999999863 6
Q ss_pred CcEEEEEEcCCCChHHHHHHHHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCC----CCCCCchhHHHHHHcCC
Q 015058 315 PRLLFIITGKGPDKESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSS----SGLDLPMKVCYCWYSRY 389 (414)
Q Consensus 315 p~i~liI~G~G~~~e~l~~~i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~----~g~~lP~kl~Eama~G~ 389 (414)
|+++|+|+|+|++++.+++++ .++. +|.|+| +++++|+..+|++||++|+++... ..+++|++++|||++|+
T Consensus 228 ~~~~l~i~G~g~~~~~l~~~~--~~~~~~v~~~g-~~~~~~~~~~~~~ad~~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~ 304 (394)
T 3okp_A 228 PDAQLLIVGSGRYESTLRRLA--TDVSQNVKFLG-RLEYQDMINTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQACGV 304 (394)
T ss_dssp TTCEEEEECCCTTHHHHHHHT--GGGGGGEEEEE-SCCHHHHHHHHHHCSEEEECCCCBGGGTBCCSSCHHHHHHHHTTC
T ss_pred CCeEEEEEcCchHHHHHHHHH--hcccCeEEEcC-CCCHHHHHHHHHhCCEEEecCccccccccccccCcHHHHHHHcCC
Confidence 789999999999999999988 6776 999998 999999999999999999874321 11789999999999999
Q ss_pred eEEEeeeCCc
Q 015058 390 SLKLLWTCSV 399 (414)
Q Consensus 390 Pvi~s~~~~~ 399 (414)
|||+++++|.
T Consensus 305 PvI~~~~~~~ 314 (394)
T 3okp_A 305 PVIAGTSGGA 314 (394)
T ss_dssp CEEECSSTTG
T ss_pred CEEEeCCCCh
Confidence 9999998765
No 4
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=100.00 E-value=2.2e-32 Score=280.57 Aligned_cols=302 Identities=13% Similarity=0.037 Sum_probs=208.9
Q ss_pred HHHHHHHHhhCCCcEEEEecCCCCCC-cc----ccc---CCCeEEEEeecCCCCCCCCCCchHHHHHHHHHHHHHHHHHH
Q 015058 22 QYQALSLARQMSLEVDVVAYGGSKPH-AA----ILE---HPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLW 93 (414)
Q Consensus 22 ~~~a~~La~~~g~eV~vv~~~~~~~~-~~----~~~---~~~i~i~~v~~~~~~~~~~~~~~~~~~~l~k~l~~~~~l~~ 93 (414)
...+..|+++ ||+|+|+|....... .. ... .+++++++++. .......+. ..+..+...... ++
T Consensus 40 ~~la~~L~~~-G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~--~~~~~~~~~-~~~~~~~~~~~~----l~ 111 (499)
T 2r60_A 40 KEVSLALAEM-GVQVDIITRRIKDENWPEFSGEIDYYQETNKVRIVRIPF--GGDKFLPKE-ELWPYLHEYVNK----II 111 (499)
T ss_dssp HHHHHHHHHT-TCEEEEEEECCCBTTBGGGCCSEEECTTCSSEEEEEECC--SCSSCCCGG-GCGGGHHHHHHH----HH
T ss_pred HHHHHHHHhc-CCeEEEEeCCCCcccccchhhhHHhccCCCCeEEEEecC--CCcCCcCHH-HHHHHHHHHHHH----HH
Confidence 3455666675 999999997653211 11 111 47899999983 221111110 111111111111 12
Q ss_pred HHhhhc-CCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCC----cHHHH-----HHHHHHHHH
Q 015058 94 FLCVKI-ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRR----SHFVS-----IYRWIEKYY 163 (414)
Q Consensus 94 ~l~~k~-~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~----~~~~~-----i~~~~Ek~~ 163 (414)
.++++. .+||+||+|++ ...+++.++++..++|+|+++|+....... ..... ..+.+ ...++|+.+
T Consensus 112 ~~l~~~~~~~Divh~~~~---~~~~~~~~~~~~~~~p~v~~~H~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (499)
T 2r60_A 112 NFYREEGKFPQVVTTHYG---DGGLAGVLLKNIKGLPFTFTGHSLGAQKME-KLNVNTSNFKEMDERFKFHRRIIAERLT 187 (499)
T ss_dssp HHHHHHTCCCSEEEEEHH---HHHHHHHHHHHHHCCCEEEECSSCHHHHHH-TTCCCSTTSHHHHHHHCHHHHHHHHHHH
T ss_pred HHHHhcCCCCCEEEEcCC---cchHHHHHHHHhcCCcEEEEccCcccccch-hhccCCCCcchhhhhHHHHHHHHHHHHH
Confidence 222222 58999999975 445566667777899999999997432111 11110 11111 334578889
Q ss_pred hccCCEEEEeCHHHHHHHHHh--hC-C-------cEEEecCC-CCCCcCCCCh-HHHHHHHHHhhhhccCCCCccccccC
Q 015058 164 GKMANGCLCVTQAMQHELAQN--WG-I-------KATVLYDQ-PPEFFHPTSL-EEKHELFCRLNKILHQPLGVQDCVSN 231 (414)
Q Consensus 164 ~k~ad~ii~vS~~~~~~l~~~--~g-i-------~i~vI~n~-~~~~f~p~~~-~~~~~l~~~l~~~~~~~~~~~~~~~~ 231 (414)
.+.||.++|+|+.+++.+.+. +| + ++.+|||+ |.+.|.|... +.+.+++++++...
T Consensus 188 ~~~ad~vi~~S~~~~~~~~~~~~~g~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~r~~~~~~~------------ 255 (499)
T 2r60_A 188 MSYADKIIVSTSQERFGQYSHDLYRGAVNVEDDDKFSVIPPGVNTRVFDGEYGDKIKAKITKYLERDL------------ 255 (499)
T ss_dssp HHHCSEEEESSHHHHHHTTTSGGGTTTCCTTCGGGEEECCCCBCTTTSSSCCCHHHHHHHHHHHHHHS------------
T ss_pred HhcCCEEEECCHHHHHHHHhhhcccccccccCCCCeEEECCCcChhhcCccchhhhHHHHHHHhcccc------------
Confidence 999999999999999998877 77 4 38999999 8788877642 23456666654000
Q ss_pred CCCCCCCccceeeeccccccccCCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCcc
Q 015058 232 GMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQ 311 (414)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (414)
..++++++ +|+++||+.++||++.|++|++.+.++
T Consensus 256 -------------------~~~~~~~~-~i~~vGrl~~~Kg~~~li~a~~~l~~~------------------------- 290 (499)
T 2r60_A 256 -------------------GSERMELP-AIIASSRLDQKKNHYGLVEAYVQNKEL------------------------- 290 (499)
T ss_dssp -------------------CGGGTTSC-EEEECSCCCGGGCHHHHHHHHHTCHHH-------------------------
T ss_pred -------------------cccCCCCc-EEEEeecCccccCHHHHHHHHHHHHHh-------------------------
Confidence 00233454 899999999999999999999998763
Q ss_pred CCCC-cEEEEEEcC--CC------C-------hHHHHHHHHHcCCC-cEEEecCCCChhhHHHHHhhc----cEEEeecc
Q 015058 312 YLYP-RLLFIITGK--GP------D-------KESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSA----DLGVCLHT 370 (414)
Q Consensus 312 ~~~p-~i~liI~G~--G~------~-------~e~l~~~i~~l~l~-~V~f~g~~v~~ed~~~~l~~a----Dl~V~~~~ 370 (414)
+| .++|+|+|+ |+ . .++++++++++|++ +|+|+| +++++|++.+|++| |++|+|+.
T Consensus 291 --~~~~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~~~V~~~G-~v~~~~~~~~~~~a~~~~dv~v~pS~ 367 (499)
T 2r60_A 291 --QDKANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCRGKVSMFP-LNSQQELAGCYAYLASKGSVFALTSF 367 (499)
T ss_dssp --HHHCEEEEEESSCSBTTTBCTTSCHHHHHHHHHHHHHHHHTTCBTTEEEEE-CCSHHHHHHHHHHHHHTTCEEEECCS
T ss_pred --CCCceEEEEECCCCCcccccccccccchHHHHHHHHHHHhcCCCceEEECC-CCCHHHHHHHHHhcCcCCCEEEECcc
Confidence 23 368999998 55 1 78999999999998 899998 99999999999999 99998743
Q ss_pred CCCCCCCchhHHHHHHcCCeEEEeeeCC
Q 015058 371 SSSGLDLPMKVCYCWYSRYSLKLLWTCS 398 (414)
Q Consensus 371 s~~g~~lP~kl~Eama~G~Pvi~s~~~~ 398 (414)
.+++|++++||||||+|||+++++|
T Consensus 368 ---~Eg~~~~~lEAma~G~PvI~s~~~g 392 (499)
T 2r60_A 368 ---YEPFGLAPVEAMASGLPAVVTRNGG 392 (499)
T ss_dssp ---CBCCCSHHHHHHHTTCCEEEESSBH
T ss_pred ---cCCCCcHHHHHHHcCCCEEEecCCC
Confidence 4789999999999999999999865
No 5
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=100.00 E-value=1.5e-31 Score=265.15 Aligned_cols=280 Identities=12% Similarity=0.116 Sum_probs=198.4
Q ss_pred HHHHHHHHhhCCCcEEEEecCCCCCCcccccCCCeEEEEeecCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhhhcCC
Q 015058 22 QYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIAS 101 (414)
Q Consensus 22 ~~~a~~La~~~g~eV~vv~~~~~~~~~~~~~~~~i~i~~v~~~~~~~~~~~~~~~~~~~l~k~l~~~~~l~~~l~~k~~~ 101 (414)
...+..|+++ ||+|+|+|....... ....+++.++.++...... .......+. .... ++.++ +..+
T Consensus 34 ~~la~~L~~~-G~~V~v~~~~~~~~~--~~~~~~i~~~~~~~~~~~~--~~~~~~~~~----~~~~----l~~~l-~~~~ 99 (394)
T 2jjm_A 34 TELGKQLAER-GHEIHFITSGLPFRL--NKVYPNIYFHEVTVNQYSV--FQYPPYDLA----LASK----MAEVA-QREN 99 (394)
T ss_dssp HHHHHHHHHT-TCEEEEECSSCC------CCCTTEEEECCCCC------CCSCCHHHH----HHHH----HHHHH-HHHT
T ss_pred HHHHHHHHhC-CCEEEEEeCCCCCcc--cccCCceEEEecccccccc--cccccccHH----HHHH----HHHHH-HHcC
Confidence 3455667775 999999997643211 1235688887776211110 111111111 1111 11112 2369
Q ss_pred CcEEEEeCCCCchHHHHHHHHHhhc--CCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEeCHHHHH
Q 015058 102 PDVFLVQNPPSVPTLVAVKWASSLR--RSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH 179 (414)
Q Consensus 102 ~Dvvh~~~pp~~~~~~~~~la~~~~--~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS~~~~~ 179 (414)
||+||+|++. +..+.+.+++++. ++|+|+++|+..... .+... .+++++++..+.||.++|+|+.+++
T Consensus 100 ~Dvv~~~~~~--~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~----~~~~~----~~~~~~~~~~~~ad~ii~~s~~~~~ 169 (394)
T 2jjm_A 100 LDILHVHYAI--PHAICAYLAKQMIGERIKIVTTLHGTDITV----LGSDP----SLNNLIRFGIEQSDVVTAVSHSLIN 169 (394)
T ss_dssp CSEEEECSST--THHHHHHHHHHHTTTCSEEEEECCHHHHHT----TTTCT----TTHHHHHHHHHHSSEEEESCHHHHH
T ss_pred CCEEEEcchh--HHHHHHHHHHHhhcCCCCEEEEEecCcccc----cCCCH----HHHHHHHHHHhhCCEEEECCHHHHH
Confidence 9999999762 3344455555554 599999999964321 11122 2234567778999999999999999
Q ss_pred HHHHhhCC--cEEEecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccccCCC
Q 015058 180 ELAQNWGI--KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPN 256 (414)
Q Consensus 180 ~l~~~~gi--~i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 256 (414)
.+.+.++. ++.+|||+ |++.|.|.+. .+++++++ ++++
T Consensus 170 ~~~~~~~~~~~~~vi~ngv~~~~~~~~~~---~~~~~~~~------------------------------------~~~~ 210 (394)
T 2jjm_A 170 ETHELVKPNKDIQTVYNFIDERVYFKRDM---TQLKKEYG------------------------------------ISES 210 (394)
T ss_dssp HHHHHTCCSSCEEECCCCCCTTTCCCCCC---HHHHHHTT------------------------------------CC--
T ss_pred HHHHhhCCcccEEEecCCccHHhcCCcch---HHHHHHcC------------------------------------CCCC
Confidence 99988765 48999999 7777876532 34454432 3344
Q ss_pred CCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHHHHHHH
Q 015058 257 RPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIR 336 (414)
Q Consensus 257 ~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l~~~i~ 336 (414)
+ .+++++||+.++||++.+++|++.+.+ . ++++|+|+|+|++.+++++.++
T Consensus 211 ~-~~i~~~G~~~~~Kg~~~li~a~~~l~~---------------------------~-~~~~l~i~G~g~~~~~l~~~~~ 261 (394)
T 2jjm_A 211 E-KILIHISNFRKVKRVQDVVQAFAKIVT---------------------------E-VDAKLLLVGDGPEFCTILQLVK 261 (394)
T ss_dssp --CEEEEECCCCGGGTHHHHHHHHHHHHH---------------------------S-SCCEEEEECCCTTHHHHHHHHH
T ss_pred C-eEEEEeeccccccCHHHHHHHHHHHHh---------------------------h-CCCEEEEECCchHHHHHHHHHH
Confidence 4 489999999999999999999999875 2 4689999999999999999999
Q ss_pred HcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCCc
Q 015058 337 RLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCSV 399 (414)
Q Consensus 337 ~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~~ 399 (414)
++++. +|.|.| +.+|++.+|++||++|+|+. .+++|++++|||+||+|||+++++|.
T Consensus 262 ~~~l~~~v~~~g---~~~~~~~~~~~adv~v~ps~---~e~~~~~~~EAma~G~PvI~~~~~~~ 319 (394)
T 2jjm_A 262 NLHIEDRVLFLG---KQDNVAELLAMSDLMLLLSE---KESFGLVLLEAMACGVPCIGTRVGGI 319 (394)
T ss_dssp TTTCGGGBCCCB---SCSCTHHHHHTCSEEEECCS---CCSCCHHHHHHHHTTCCEEEECCTTS
T ss_pred HcCCCCeEEEeC---chhhHHHHHHhCCEEEeccc---cCCCchHHHHHHhcCCCEEEecCCCh
Confidence 99997 999998 68999999999999998643 57899999999999999999998753
No 6
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=99.97 E-value=1.2e-30 Score=265.95 Aligned_cols=225 Identities=12% Similarity=0.074 Sum_probs=166.7
Q ss_pred cCCCcEEEEeCCCCchHHHHHHHHHhh--cCCeEEEEEcCcchhh-h---hhc-cCCC-cHH----HHH--HHHHHHHHh
Q 015058 99 IASPDVFLVQNPPSVPTLVAVKWASSL--RRSAFIVDWHNFGYTL-L---SLS-LGRR-SHF----VSI--YRWIEKYYG 164 (414)
Q Consensus 99 ~~~~Dvvh~~~pp~~~~~~~~~la~~~--~~~~~Iv~~H~~~~~l-~---~~~-~~~~-~~~----~~i--~~~~Ek~~~ 164 (414)
..+|||||+|++ .+.+++.++++. .++|+|+++|+..+.- . .+. .+.. ..+ ... ..++++...
T Consensus 128 ~~~~DiIh~~~~---~~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (485)
T 1rzu_A 128 GWRPDMVHAHDW---QAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGL 204 (485)
T ss_dssp SCCCSEEEEEHH---HHTTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHH
T ss_pred CCCCCEEEeccc---chhHHHHHHhhcccCCCCEEEEecCccccCCCCHHHHhhcCCChhhcccccccccccccHHHHHH
Confidence 478999999985 334445555554 7899999999963210 0 000 0000 000 000 124567788
Q ss_pred ccCCEEEEeCHHHHHHHHHh-hC-----------CcEEEecCC-CCCCcCCCChH----------------HHHHHHHHh
Q 015058 165 KMANGCLCVTQAMQHELAQN-WG-----------IKATVLYDQ-PPEFFHPTSLE----------------EKHELFCRL 215 (414)
Q Consensus 165 k~ad~ii~vS~~~~~~l~~~-~g-----------i~i~vI~n~-~~~~f~p~~~~----------------~~~~l~~~l 215 (414)
+.||.++|+|+.+++.+.+. +| .++.+|||+ |.+.|.|.... .+.++++++
T Consensus 205 ~~ad~vi~~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 284 (485)
T 1rzu_A 205 QTATALSTVSPSYAEEILTAEFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHF 284 (485)
T ss_dssp HHCSEEEESCHHHHHHTTSHHHHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHH
T ss_pred hhcCEEEecCHhHHHHHhccccCcchHHHHHhhcCCceEEcCCCcccccCCcccccccccccccchhhHHHhHHHHHHhc
Confidence 99999999999999988764 34 238999999 87888775321 245566554
Q ss_pred hhhccCCCCccccccCCCCCCCCccceeeeccccccccCCC-CCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccC
Q 015058 216 NKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPN-RPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNED 294 (414)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~ 294 (414)
+ ++++ ++ +|+++||+.++||++.|++|++.+.+
T Consensus 285 ~------------------------------------~~~~~~~-~i~~vGrl~~~Kg~~~li~a~~~l~~--------- 318 (485)
T 1rzu_A 285 R------------------------------------IDDDGSP-LFCVISRLTWQKGIDLMAEAVDEIVS--------- 318 (485)
T ss_dssp T------------------------------------CCCSSSC-EEEEESCBSTTTTHHHHHTTHHHHHH---------
T ss_pred C------------------------------------CCCCCCe-EEEEEccCccccCHHHHHHHHHHHHh---------
Confidence 3 4443 44 89999999999999999999999874
Q ss_pred CCchhhhhhhhhcCCccCCCCcEEEEEEcCCC--ChHHHHHHHHHcCCCcEE-EecCCCChhhHHHHHhhccEEEeeccC
Q 015058 295 DSTNEEVFLKEISDGKQYLYPRLLFIITGKGP--DKESYEEKIRRLRLKRVA-FRTMWLSAEDYPLLLGSADLGVCLHTS 371 (414)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~--~~e~l~~~i~~l~l~~V~-f~g~~v~~ed~~~~l~~aDl~V~~~~s 371 (414)
++++|+|+|+|+ .++.+++++++++ .+|. |.| + +.++++.+|++||++|+|+.
T Consensus 319 --------------------~~~~l~ivG~g~~~~~~~l~~~~~~~~-~~v~~~~g-~-~~~~~~~~~~~adv~v~pS~- 374 (485)
T 1rzu_A 319 --------------------LGGRLVVLGAGDVALEGALLAAASRHH-GRVGVAIG-Y-NEPLSHLMQAGCDAIIIPSR- 374 (485)
T ss_dssp --------------------TTCEEEEEECBCHHHHHHHHHHHHHTT-TTEEEEES-C-CHHHHHHHHHHCSEEEECCS-
T ss_pred --------------------cCceEEEEeCCchHHHHHHHHHHHhCC-CcEEEecC-C-CHHHHHHHHhcCCEEEECcc-
Confidence 379999999997 4788999999986 6888 665 6 77888999999999998743
Q ss_pred CCCCCCchhHHHHHHcCCeEEEeeeCC
Q 015058 372 SSGLDLPMKVCYCWYSRYSLKLLWTCS 398 (414)
Q Consensus 372 ~~g~~lP~kl~Eama~G~Pvi~s~~~~ 398 (414)
.+++|++++||||||+|||+++++|
T Consensus 375 --~E~~~~~~lEAma~G~PvI~s~~gg 399 (485)
T 1rzu_A 375 --FEPCGLTQLYALRYGCIPVVARTGG 399 (485)
T ss_dssp --CCSSCSHHHHHHHHTCEEEEESSHH
T ss_pred --cCCCCHHHHHHHHCCCCEEEeCCCC
Confidence 5789999999999999999999855
No 7
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.97 E-value=1.3e-31 Score=261.45 Aligned_cols=278 Identities=12% Similarity=0.051 Sum_probs=193.2
Q ss_pred HHHHHHHHHhhCCCcEEEEecCCCCCCcccccCCCeEEEEeecCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhhhcC
Q 015058 21 MQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIA 100 (414)
Q Consensus 21 ~~~~a~~La~~~g~eV~vv~~~~~~~~~~~~~~~~i~i~~v~~~~~~~~~~~~~~~~~~~l~k~l~~~~~l~~~l~~k~~ 100 (414)
+...+..|+++ ||+|+|+|...... ...++++++++ ... .. .. ....+.... +..++ +..
T Consensus 20 ~~~l~~~L~~~-G~~V~v~~~~~~~~-----~~~~~~v~~~~--~~~---~~-~~---~~~~~~~~~----l~~~i-~~~ 79 (374)
T 2iw1_A 20 FMRIASTVAAR-GHHVRVYTQSWEGD-----CPKAFELIQVP--VKS---HT-NH---GRNAEYYAW----VQNHL-KEH 79 (374)
T ss_dssp HHHHHHHHHHT-TCCEEEEESEECSC-----CCTTCEEEECC--CCC---SS-HH---HHHHHHHHH----HHHHH-HHS
T ss_pred HHHHHHHHHhC-CCeEEEEecCCCCC-----CCCCcEEEEEc--cCc---cc-ch---hhHHHHHHH----HHHHH-hcc
Confidence 44566777775 99999999764221 12478888887 221 11 11 111111111 11222 347
Q ss_pred CCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhc--cCCEEEEeCHHHH
Q 015058 101 SPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGK--MANGCLCVTQAMQ 178 (414)
Q Consensus 101 ~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k--~ad~ii~vS~~~~ 178 (414)
+||+||++++... ..+.++....+++.+.+.|+.... .....+.+.++|+..++ .+|.++++|+.++
T Consensus 80 ~~Dvv~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~ 148 (374)
T 2iw1_A 80 PADRVVGFNKMPG---LDVYFAADVCYAEKVAQEKGFLYR--------LTSRYRHYAAFERATFEQGKSTKLMMLTDKQI 148 (374)
T ss_dssp CCSEEEESSCCTT---CSEEECCSCCHHHHHHHHCCHHHH--------TSHHHHHHHHHHHHHHSTTCCCEEEESCHHHH
T ss_pred CCCEEEEecCCCC---ceeeeccccccceeeeecccchhh--------hcHHHHHHHHHHHHHhhccCCcEEEEcCHHHH
Confidence 9999999975211 111111122223333334443211 11223455677777765 6999999999999
Q ss_pred HHHHHhhCCc---EEEecCC-CCCCcCCCCh-HHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeecccccccc
Q 015058 179 HELAQNWGIK---ATVLYDQ-PPEFFHPTSL-EEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFL 253 (414)
Q Consensus 179 ~~l~~~~gi~---i~vI~n~-~~~~f~p~~~-~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 253 (414)
+.+.+.+|.+ +.++||+ |.+.|.|... ..+.+++++++ +
T Consensus 149 ~~~~~~~~~~~~~~~vi~ngv~~~~~~~~~~~~~~~~~~~~~~------------------------------------~ 192 (374)
T 2iw1_A 149 ADFQKHYQTEPERFQILPPGIYPDRKYSEQIPNSREIYRQKNG------------------------------------I 192 (374)
T ss_dssp HHHHHHHCCCGGGEEECCCCCCGGGSGGGSCTTHHHHHHHHTT------------------------------------C
T ss_pred HHHHHHhCCChhheEEecCCcCHHhcCcccchhHHHHHHHHhC------------------------------------C
Confidence 9999888864 8999999 7777766432 23455665543 4
Q ss_pred CCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHHHH
Q 015058 254 KPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEE 333 (414)
Q Consensus 254 ~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l~~ 333 (414)
++++ .+++++||+.++||++.+++|++.+.++. .++++|+|+|+|+. +++++
T Consensus 193 ~~~~-~~i~~~G~~~~~K~~~~li~a~~~l~~~~--------------------------~~~~~l~i~G~g~~-~~~~~ 244 (374)
T 2iw1_A 193 KEQQ-NLLLQVGSDFGRKGVDRSIEALASLPESL--------------------------RHNTLLFVVGQDKP-RKFEA 244 (374)
T ss_dssp CTTC-EEEEEECSCTTTTTHHHHHHHHHTSCHHH--------------------------HHTEEEEEESSSCC-HHHHH
T ss_pred CCCC-eEEEEeccchhhcCHHHHHHHHHHhHhcc--------------------------CCceEEEEEcCCCH-HHHHH
Confidence 4444 58999999999999999999999987531 25799999999985 78999
Q ss_pred HHHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCCc
Q 015058 334 KIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCSV 399 (414)
Q Consensus 334 ~i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~~ 399 (414)
+++++++. +|+|+| +.+|++.+|++||++|+|+ ..+++|++++|||+||+|||+++++|.
T Consensus 245 ~~~~~~~~~~v~~~g---~~~~~~~~~~~ad~~v~ps---~~e~~~~~~~Ea~a~G~Pvi~~~~~~~ 305 (374)
T 2iw1_A 245 LAEKLGVRSNVHFFS---GRNDVSELMAAADLLLHPA---YQEAAGIVLLEAITAGLPVLTTAVCGY 305 (374)
T ss_dssp HHHHHTCGGGEEEES---CCSCHHHHHHHCSEEEECC---SCCSSCHHHHHHHHHTCCEEEETTSTT
T ss_pred HHHHcCCCCcEEECC---CcccHHHHHHhcCEEEecc---ccCCcccHHHHHHHCCCCEEEecCCCc
Confidence 99999997 999998 5789999999999999864 357899999999999999999998774
No 8
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=99.97 E-value=2.2e-30 Score=263.98 Aligned_cols=224 Identities=15% Similarity=0.091 Sum_probs=166.6
Q ss_pred CCCcEEEEeCCCCchHHHHHHHHH-hhcCCeEEEEEcCcchhh-hh---hc-cCCC-cHH------HHHHHHHHHHHhcc
Q 015058 100 ASPDVFLVQNPPSVPTLVAVKWAS-SLRRSAFIVDWHNFGYTL-LS---LS-LGRR-SHF------VSIYRWIEKYYGKM 166 (414)
Q Consensus 100 ~~~Dvvh~~~pp~~~~~~~~~la~-~~~~~~~Iv~~H~~~~~l-~~---~~-~~~~-~~~------~~i~~~~Ek~~~k~ 166 (414)
.+|||||+|++ ...+++.+++ +..++|+|+++|+..+.. .. +. .+.. ..+ .....++++...+.
T Consensus 128 ~~~Divh~~~~---~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (485)
T 2qzs_A 128 WRPDVVHAHDW---HAGLAPAYLAARGRPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYY 204 (485)
T ss_dssp CCCSEEEEETG---GGTTHHHHHHHTTCSSEEEEEESCTTCCCEEEGGGGGTTTCCGGGCSTTTTEETTEEEHHHHHHHH
T ss_pred CCCCEEEeecc---chhHHHHHHhhccCCCCEEEEecCccccCCCCHHHHHhcCCCchhcccccccccccccHHHHHHHh
Confidence 68999999986 3333444555 667999999999963210 00 00 0000 000 00012456777899
Q ss_pred CCEEEEeCHHHHHHHHHh-hC-------------CcEEEecCC-CCCCcCCCChH----------------HHHHHHHHh
Q 015058 167 ANGCLCVTQAMQHELAQN-WG-------------IKATVLYDQ-PPEFFHPTSLE----------------EKHELFCRL 215 (414)
Q Consensus 167 ad~ii~vS~~~~~~l~~~-~g-------------i~i~vI~n~-~~~~f~p~~~~----------------~~~~l~~~l 215 (414)
||.++|+|+.+++.+.+. +| .++.+|||+ |.+.|.|.... .+.++++++
T Consensus 205 ad~vi~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 284 (485)
T 2qzs_A 205 ADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQLQIAM 284 (485)
T ss_dssp CSEEEESSHHHHHHTTSHHHHTTCHHHHHHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHHHHHHHH
T ss_pred cCeEEecCHHHHHHHhccccCcchHHHHHhhccCCceEEEecCCCccccCccccccccccccccchhHHHHhHHHHHHHc
Confidence 999999999999988754 44 458999999 77888775321 245566554
Q ss_pred hhhccCCCCccccccCCCCCCCCccceeeeccccccccCC--CCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhcc
Q 015058 216 NKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKP--NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNE 293 (414)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~ 293 (414)
+ +++ ++ .+++++||+.++||++.|++|++.+.+
T Consensus 285 ~------------------------------------~~~~~~~-~~i~~vGrl~~~Kg~~~li~a~~~l~~-------- 319 (485)
T 2qzs_A 285 G------------------------------------LKVDDKV-PLFAVVSRLTSQKGLDLVLEALPGLLE-------- 319 (485)
T ss_dssp T------------------------------------CCCCTTS-CEEEEEEEESGGGCHHHHHHHHHHHHH--------
T ss_pred C------------------------------------CCCCCCC-eEEEEeccCccccCHHHHHHHHHHHhh--------
Confidence 3 333 44 489999999999999999999999874
Q ss_pred CCCchhhhhhhhhcCCccCCCCcEEEEEEcCCC--ChHHHHHHHHHcCCCcEE-EecCCCChhhHHHHHhhccEEEeecc
Q 015058 294 DDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP--DKESYEEKIRRLRLKRVA-FRTMWLSAEDYPLLLGSADLGVCLHT 370 (414)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~--~~e~l~~~i~~l~l~~V~-f~g~~v~~ed~~~~l~~aDl~V~~~~ 370 (414)
++++|+|+|+|+ .++.+++++++++ .+|. |.| + +.++++.+|++||++|+|+.
T Consensus 320 ---------------------~~~~l~ivG~g~~~~~~~l~~~~~~~~-~~v~~~~g-~-~~~~~~~~~~~adv~v~pS~ 375 (485)
T 2qzs_A 320 ---------------------QGGQLALLGAGDPVLQEGFLAAAAEYP-GQVGVQIG-Y-HEAFSHRIMGGADVILVPSR 375 (485)
T ss_dssp ---------------------TTCEEEEEEEECHHHHHHHHHHHHHST-TTEEEEES-C-CHHHHHHHHHHCSEEEECCS
T ss_pred ---------------------CCcEEEEEeCCchHHHHHHHHHHHhCC-CcEEEeCC-C-CHHHHHHHHHhCCEEEECCc
Confidence 379999999997 5788999999987 6887 665 6 77888999999999998743
Q ss_pred CCCCCCCchhHHHHHHcCCeEEEeeeCC
Q 015058 371 SSSGLDLPMKVCYCWYSRYSLKLLWTCS 398 (414)
Q Consensus 371 s~~g~~lP~kl~Eama~G~Pvi~s~~~~ 398 (414)
.+++|++++||||||+|||+++++|
T Consensus 376 ---~E~~g~~~lEAma~G~PvI~s~~gg 400 (485)
T 2qzs_A 376 ---FEPCGLTQLYGLKYGTLPLVRRTGG 400 (485)
T ss_dssp ---CCSSCSHHHHHHHHTCEEEEESSHH
T ss_pred ---cCCCcHHHHHHHHCCCCEEECCCCC
Confidence 5789999999999999999998754
No 9
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.97 E-value=2e-30 Score=255.74 Aligned_cols=274 Identities=12% Similarity=0.089 Sum_probs=187.3
Q ss_pred HHHHHHHHHHhhCCCcEEEEecCCCCC-CcccccCCCeEEEEeecCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhhh
Q 015058 20 RMQYQALSLARQMSLEVDVVAYGGSKP-HAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVK 98 (414)
Q Consensus 20 r~~~~a~~La~~~g~eV~vv~~~~~~~-~~~~~~~~~i~i~~v~~~~~~~~~~~~~~~~~~~l~k~l~~~~~l~~~l~~k 98 (414)
.+...+..|+++ ||+|++++...... ........+ ++++++ .... ..+.. ........ +..++ +
T Consensus 40 ~~~~l~~~L~~~-G~~V~v~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~--~~~~~----~~~~~~~~----l~~~l-~ 104 (406)
T 2gek_A 40 HVLQLAEVLRDA-GHEVSVLAPASPHVKLPDYVVSGG-KAVPIP--YNGS--VARLR----FGPATHRK----VKKWI-A 104 (406)
T ss_dssp HHHHHHHHHHHT-TCEEEEEESCCTTSCCCTTEEECC-CCC--------------------CCHHHHHH----HHHHH-H
T ss_pred HHHHHHHHHHHC-CCeEEEEecCCccccCCcccccCC-cEEecc--ccCC--ccccc----ccHHHHHH----HHHHH-H
Confidence 344567778775 99999999876432 111111122 444444 1100 00000 00001111 11112 2
Q ss_pred cCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEeCHHHH
Q 015058 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178 (414)
Q Consensus 99 ~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS~~~~ 178 (414)
..+||+||++.+.... .+.++++..++|+|+++|+... .......+.++++ ...+.+|.++|+|+.++
T Consensus 105 ~~~~Dii~~~~~~~~~---~~~~~~~~~~~~~i~~~h~~~~--------~~~~~~~~~~~~~-~~~~~~d~ii~~s~~~~ 172 (406)
T 2gek_A 105 EGDFDVLHIHEPNAPS---LSMLALQAAEGPIVATFHTSTT--------KSLTLSVFQGILR-PYHEKIIGRIAVSDLAR 172 (406)
T ss_dssp HHCCSEEEEECCCSSS---HHHHHHHHEESSEEEEECCCCC--------SHHHHHHHHSTTH-HHHTTCSEEEESSHHHH
T ss_pred hcCCCEEEECCccchH---HHHHHHHhcCCCEEEEEcCcch--------hhhhHHHHHHHHH-HHHhhCCEEEECCHHHH
Confidence 3699999999874332 2445556668999999999632 1112233344445 66789999999999999
Q ss_pred HHHHHhhCCc-EEEecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccccCCC
Q 015058 179 HELAQNWGIK-ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPN 256 (414)
Q Consensus 179 ~~l~~~~gi~-i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 256 (414)
+.+.+.++.+ + +|||+ +.+.|.+.... ..++++
T Consensus 173 ~~~~~~~~~~~~-vi~~~v~~~~~~~~~~~--------------------------------------------~~~~~~ 207 (406)
T 2gek_A 173 RWQMEALGSDAV-EIPNGVDVASFADAPLL--------------------------------------------DGYPRE 207 (406)
T ss_dssp HHHHHHHSSCEE-ECCCCBCHHHHHTCCCC--------------------------------------------TTCSCS
T ss_pred HHHHHhcCCCcE-EecCCCChhhcCCCchh--------------------------------------------hhccCC
Confidence 9998877766 7 99999 54444333210 012334
Q ss_pred CCeEEEEeccC-CCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHHHHHH
Q 015058 257 RPALVVSSTSW-TPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKI 335 (414)
Q Consensus 257 ~~~~i~~vgrl-~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l~~~i 335 (414)
+ ..++++|++ .+.||++.+++|+..+.+ .+|+++|+|+|+|+. +++++++
T Consensus 208 ~-~~i~~~G~~~~~~Kg~~~li~a~~~l~~---------------------------~~~~~~l~i~G~~~~-~~l~~~~ 258 (406)
T 2gek_A 208 G-RTVLFLGRYDEPRKGMAVLLAALPKLVA---------------------------RFPDVEILIVGRGDE-DELREQA 258 (406)
T ss_dssp S-CEEEEESCTTSGGGCHHHHHHHHHHHHT---------------------------TSTTCEEEEESCSCH-HHHHHHT
T ss_pred C-eEEEEEeeeCccccCHHHHHHHHHHHHH---------------------------HCCCeEEEEEcCCcH-HHHHHHH
Confidence 4 389999999 999999999999999875 367899999999999 9999999
Q ss_pred HHcCCCcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCC
Q 015058 336 RRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCS 398 (414)
Q Consensus 336 ~~l~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~ 398 (414)
+++ -.+|.|.| +++.+++..+|++||++|+++ ...+++|++++|||+||+|||+++++|
T Consensus 259 ~~~-~~~v~~~g-~~~~~~~~~~~~~adv~v~ps--~~~e~~~~~~~Ea~a~G~PvI~~~~~~ 317 (406)
T 2gek_A 259 GDL-AGHLRFLG-QVDDATKASAMRSADVYCAPH--LGGESFGIVLVEAMAAGTAVVASDLDA 317 (406)
T ss_dssp GGG-GGGEEECC-SCCHHHHHHHHHHSSEEEECC--CSCCSSCHHHHHHHHHTCEEEECCCHH
T ss_pred Hhc-cCcEEEEe-cCCHHHHHHHHHHCCEEEecC--CCCCCCchHHHHHHHcCCCEEEecCCc
Confidence 887 34999997 999999999999999999863 235789999999999999999999854
No 10
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=99.96 E-value=1.9e-29 Score=251.82 Aligned_cols=213 Identities=14% Similarity=0.194 Sum_probs=156.5
Q ss_pred cCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEE-EEeCHHH
Q 015058 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGC-LCVTQAM 177 (414)
Q Consensus 99 ~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~i-i~vS~~~ 177 (414)
..+||+||+|++... .++.+++ .++|+|++.|+... . .. ....+++++++ +.+|.+ +++|+..
T Consensus 124 ~~~~Dvv~~~~~~~~---~~~~~~~--~~~p~v~~~h~~~~------~-~~---~~~~~~~~~~~-~~~~~~i~~~s~~~ 187 (416)
T 2x6q_A 124 LSSFDYVLVHDPQPA---ALIEFYE--KKSPWLWRCHIDLS------S-PN---REFWEFLRRFV-EKYDRYIFHLPEYV 187 (416)
T ss_dssp GGGSSEEEEESSTTG---GGGGGSC--CCSCEEEECCSCCS------S-CC---HHHHHHHHHHH-TTSSEEEESSGGGS
T ss_pred hcCCCEEEEeccchh---hHHHHHH--hcCCEEEEEccccC------C-cc---HHHHHHHHHHH-HhCCEEEEechHHH
Confidence 358999999987322 1222222 23899999998642 1 11 12334555555 455554 5777765
Q ss_pred HHHHHHhhCCcEEEecCC-CCCCcCC--CChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccccC
Q 015058 178 QHELAQNWGIKATVLYDQ-PPEFFHP--TSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLK 254 (414)
Q Consensus 178 ~~~l~~~~gi~i~vI~n~-~~~~f~p--~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 254 (414)
++.+. ..++.+|||+ |+..|.+ .+.+++.+++++++ ++
T Consensus 188 ~~~~~---~~~~~vi~ngvd~~~~~~~~~~~~~~~~~r~~~~------------------------------------~~ 228 (416)
T 2x6q_A 188 QPELD---RNKAVIMPPSIDPLSEKNVELKQTEILRILERFD------------------------------------VD 228 (416)
T ss_dssp CTTSC---TTTEEECCCCBCTTSTTTSCCCHHHHHHHHHHTT------------------------------------CC
T ss_pred HhhCC---ccceEEeCCCCChhhhcccccChhhHHHHHHHhC------------------------------------CC
Confidence 54221 1358899999 7666643 23334556665543 44
Q ss_pred CCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCC-----hH
Q 015058 255 PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD-----KE 329 (414)
Q Consensus 255 ~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~-----~e 329 (414)
++++ +++++||+.++||++.|++|++.+.++ .|+++|+|+|+|+. ++
T Consensus 229 ~~~~-~i~~vGrl~~~Kg~~~li~a~~~l~~~---------------------------~~~~~l~i~G~g~~~~~~~~~ 280 (416)
T 2x6q_A 229 PEKP-IITQVSRFDPWKGIFDVIEIYRKVKEK---------------------------IPGVQLLLVGVMAHDDPEGWI 280 (416)
T ss_dssp TTSC-EEEEECCCCTTSCHHHHHHHHHHHHHH---------------------------CTTCEEEEEECCCTTCHHHHH
T ss_pred CCCc-EEEEEeccccccCHHHHHHHHHHHHHh---------------------------CCCeEEEEEecCcccchhHHH
Confidence 5554 899999999999999999999999863 67899999999986 56
Q ss_pred HHHHHHHHcCCC-cEEEecCCCC---hhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCC
Q 015058 330 SYEEKIRRLRLK-RVAFRTMWLS---AEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCS 398 (414)
Q Consensus 330 ~l~~~i~~l~l~-~V~f~g~~v~---~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~ 398 (414)
.++++++++++. +|+|+| +++ +++++.+|++||++|+++. .+++|++++||||||+|||+++++|
T Consensus 281 ~l~~~~~~~~~~~~V~~~G-~~~~~~~~~~~~~~~~ad~~v~ps~---~E~~~~~~lEAma~G~PvI~~~~~g 349 (416)
T 2x6q_A 281 YFEKTLRKIGEDYDVKVLT-NLIGVHAREVNAFQRASDVILQMSI---REGFGLTVTEAMWKGKPVIGRAVGG 349 (416)
T ss_dssp HHHHHHHHHTTCTTEEEEE-GGGTCCHHHHHHHHHHCSEEEECCS---SCSSCHHHHHHHHTTCCEEEESCHH
T ss_pred HHHHHHHHhCCCCcEEEec-ccCCCCHHHHHHHHHhCCEEEECCC---cCCCccHHHHHHHcCCCEEEccCCC
Confidence 789999999997 999997 554 7899999999999997643 4789999999999999999999854
No 11
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=99.96 E-value=3.1e-29 Score=276.02 Aligned_cols=306 Identities=8% Similarity=-0.019 Sum_probs=199.6
Q ss_pred HHHHHhhCCCcEE----EEecCCCCC--------CcccccCCCeEEEEeecCCCC---CCCCCCchHHHHHHHHHHHHHH
Q 015058 25 ALSLARQMSLEVD----VVAYGGSKP--------HAAILEHPSIHIHTMTQWPTI---PRGLPKVLKPVLLLLKPLIQFF 89 (414)
Q Consensus 25 a~~La~~~g~eV~----vv~~~~~~~--------~~~~~~~~~i~i~~v~~~~~~---~~~~~~~~~~~~~l~k~l~~~~ 89 (414)
++.|+++ ||+|+ |+|.....+ ...+...++++|+++|-.+.. .+..++. ..+.++..+...
T Consensus 320 a~~L~~~-G~~V~~~V~v~Tr~~~~~~g~~y~~~~e~i~~~~gv~I~RvP~~~~~g~l~~~l~k~-~L~~~L~~F~~~-- 395 (816)
T 3s28_A 320 LQRIKQQ-GLNIKPRILILTRLLPDAVGTTCGERLERVYDSEYCDILRVPFRTEKGIVRKWISRF-EVWPYLETYTED-- 395 (816)
T ss_dssp HHHHHHT-TCCCCCEEEEEEECCTTCTTSSTTSSEEECTTCSSEEEEEECEEETTEEECSCCCTT-TCGGGHHHHHHH--
T ss_pred HHHHHHC-CCccceeeEEEeCCCCCCCCCccCCcceeecCcCCeEEEEecCCCccccccccccHH-HHHHHHHHHHHH--
Confidence 3456665 99876 898764321 011112369999999832210 0111111 111111111111
Q ss_pred HHHHHHhh-hcCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCc--HH---HHHHH--HHHH
Q 015058 90 MLLWFLCV-KIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRS--HF---VSIYR--WIEK 161 (414)
Q Consensus 90 ~l~~~l~~-k~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~--~~---~~i~~--~~Ek 161 (414)
.+..++. ...+|||||+|.+ .+++++.++++..|+|+|++.|+....... ..... .+ .++.. ..|+
T Consensus 396 -~l~~il~~~~~~PDVIHsH~~---~sglva~llar~~gvP~V~T~Hsl~~~k~~--~~~~~~~~~~~~y~~~~r~~aE~ 469 (816)
T 3s28_A 396 -AAVELSKELNGKPDLIIGNYS---DGNLVASLLAHKLGVTQCTIAHALEKTKYP--DSDIYWKKLDDKYHFSCQFTADI 469 (816)
T ss_dssp -HHHHHHHHCSSCCSEEEEEHH---HHHHHHHHHHHHHTCCEEEECSCCHHHHST--TTTTTHHHHHHHHCHHHHHHHHH
T ss_pred -HHHHHHHhcCCCCeEEEeCCc---hHHHHHHHHHHHcCCCEEEEEecccccccc--cccchhhhHHHHHHHHHHHHHHH
Confidence 1111222 2358999999975 566677788888899999999998532110 00100 11 11112 2378
Q ss_pred HHhccCCEEEEeCHHHHHHHHHh---hCC---------------------cEEEecCC-CCCCcCCCChHHH------HH
Q 015058 162 YYGKMANGCLCVTQAMQHELAQN---WGI---------------------KATVLYDQ-PPEFFHPTSLEEK------HE 210 (414)
Q Consensus 162 ~~~k~ad~ii~vS~~~~~~l~~~---~gi---------------------~i~vI~n~-~~~~f~p~~~~~~------~~ 210 (414)
...+.||.|||+|+..++.+.+. |+. ++.+|||| |.+.|.|.+...+ ..
T Consensus 470 ~~l~~AD~VIa~S~~~~~~l~~~~~~y~~~~~~~~p~Lyr~~~gI~~~~~ki~VIpnGVD~~~F~P~~~~~~Rl~~~~~~ 549 (816)
T 3s28_A 470 FAMNHTDFIITSTFQEIAGSKETVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLTKFHSE 549 (816)
T ss_dssp HHHHHSSEEEESCHHHHHCCSSSCCTTGGGSSEEETTTEEEEESCCTTCTTEEECCCCCCTTTSCCTTCTTTCCGGGHHH
T ss_pred HHHHhCCEEEECCHHHHHHHHHHHHHhhhhhccccchhhhcccccccCCCCEEEECCCcCHHHcCccchhhhhhhhcccc
Confidence 89999999999999998853221 111 68999999 8888988652211 11
Q ss_pred HHHHhhhhccCCCCccccccCCCCCCCCccceeeecccccccc--CCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHh
Q 015058 211 LFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFL--KPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVA 288 (414)
Q Consensus 211 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~ 288 (414)
+...+. . | ... ...+++ +++++ +|+++||+.++||++.|++|+..+.++
T Consensus 550 i~~~l~-~---p--------------~~~--------r~~lg~l~~~~~~-vIl~vGRl~~~KGid~LIeA~~~L~~~-- 600 (816)
T 3s28_A 550 IEELLY-S---D--------------VEN--------KEHLCVLKDKKKP-ILFTMARLDRVKNLSGLVEWYGKNTRL-- 600 (816)
T ss_dssp HHHHHH-C---S--------------CCB--------TTEESCBSCTTSC-EEEEECCCCTTTTHHHHHHHHHHCHHH--
T ss_pred cccccc-c---h--------------hhH--------HHHhcccCCCCCe-EEEEEccCcccCCHHHHHHHHHHHHhh--
Confidence 110000 0 0 000 111233 44554 999999999999999999999999763
Q ss_pred hhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCC-----------ChHHHHHHHHHcCCC-cEEEecCCC----Ch
Q 015058 289 AILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP-----------DKESYEEKIRRLRLK-RVAFRTMWL----SA 352 (414)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~-----------~~e~l~~~i~~l~l~-~V~f~g~~v----~~ 352 (414)
.|+++|+|+|+|+ ..++++++++++++. +|.|+| ++ +.
T Consensus 601 -------------------------~~~v~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~flG-~~~~~v~~ 654 (816)
T 3s28_A 601 -------------------------RELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWIS-SQMDRVRN 654 (816)
T ss_dssp -------------------------HHHCEEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEEEC-CCCCHHHH
T ss_pred -------------------------CCCeEEEEEeCCCcccccchhhHHHHHHHHHHHHHcCCCCcEEEcc-CccccCCH
Confidence 4689999999999 678899999999998 999997 44 45
Q ss_pred hhHHHHHh-hccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCC
Q 015058 353 EDYPLLLG-SADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCS 398 (414)
Q Consensus 353 ed~~~~l~-~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~ 398 (414)
+++..+|+ +||++|+|+ ..+++|++++||||||+|||+|+++|
T Consensus 655 ~eL~~~~~~aaDvfV~PS---~~EgfglvllEAMA~G~PVIasd~GG 698 (816)
T 3s28_A 655 GELYRYICDTKGAFVQPA---LYEAFGLTVVEAMTCGLPTFATCKGG 698 (816)
T ss_dssp HHHHHHHHHTTCEEEECC---SCBSSCHHHHHHHHTTCCEEEESSBT
T ss_pred HHHHHHHHhcCeEEEECC---CccCccHHHHHHHHcCCCEEEeCCCC
Confidence 88999998 689999874 35789999999999999999999876
No 12
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=99.96 E-value=2.5e-28 Score=237.57 Aligned_cols=232 Identities=16% Similarity=0.055 Sum_probs=173.1
Q ss_pred HHHHHHHHhhCCCcEEEEecCCCCCCcccccCCCeEEEEeecCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhhhcCC
Q 015058 22 QYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIAS 101 (414)
Q Consensus 22 ~~~a~~La~~~g~eV~vv~~~~~~~~~~~~~~~~i~i~~v~~~~~~~~~~~~~~~~~~~l~k~l~~~~~l~~~l~~k~~~ 101 (414)
...+..|+++ ||+|++++....... .+++++++.+ . . ..+.+.+ +..+
T Consensus 37 ~~l~~~L~~~-G~~v~v~~~~~~~~~-----~~~~~~~~~~----------~-~---~~l~~~l------------~~~~ 84 (342)
T 2iuy_A 37 ANLMDGLLEL-GHEVFLLGAPGSPAG-----RPGLTVVPAG----------E-P---EEIERWL------------RTAD 84 (342)
T ss_dssp HHHHHHHHHT-TCEEEEESCTTSCCC-----STTEEECSCC----------S-H---HHHHHHH------------HHCC
T ss_pred HHHHHHHHHc-CCeEEEEecCCCCCC-----CCcceeccCC----------c-H---HHHHHHH------------HhcC
Confidence 3456777775 999999997754321 2455543211 1 1 1111211 2379
Q ss_pred CcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEeCHHHHHHH
Q 015058 102 PDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHEL 181 (414)
Q Consensus 102 ~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS~~~~~~l 181 (414)
||+||+|++... . ++++..++| |+++|+... . .. .+|.++|+|+.+++.+
T Consensus 85 ~Dvi~~~~~~~~---~---~~~~~~~~p-v~~~h~~~~------~-~~----------------~~d~ii~~S~~~~~~~ 134 (342)
T 2iuy_A 85 VDVVHDHSGGVI---G---PAGLPPGTA-FISSHHFTT------R-PV----------------NPVGCTYSSRAQRAHC 134 (342)
T ss_dssp CSEEEECSSSSS---C---STTCCTTCE-EEEEECSSS------B-CS----------------CCTTEEESCHHHHHHT
T ss_pred CCEEEECCchhh---H---HHHhhcCCC-EEEecCCCC------C-cc----------------cceEEEEcCHHHHHHH
Confidence 999999987322 1 114567899 999999742 1 11 1999999999999988
Q ss_pred HHhhCCcEEEecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccccCCCCCeE
Q 015058 182 AQNWGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPAL 260 (414)
Q Consensus 182 ~~~~gi~i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 260 (414)
.+ ..++.+|||+ |.+.|.|... .. ++++ .
T Consensus 135 ~~--~~~~~vi~ngvd~~~~~~~~~----------------------------------------------~~-~~~~-~ 164 (342)
T 2iuy_A 135 GG--GDDAPVIPIPVDPARYRSAAD----------------------------------------------QV-AKED-F 164 (342)
T ss_dssp TC--CTTSCBCCCCBCGGGSCCSTT----------------------------------------------CC-CCCS-C
T ss_pred hc--CCceEEEcCCCChhhcCcccc----------------------------------------------cC-CCCC-E
Confidence 65 4568999999 7666655421 01 1333 7
Q ss_pred EEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHHHHHHHHcCC
Q 015058 261 VVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRL 340 (414)
Q Consensus 261 i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l~~~i~~l~l 340 (414)
++++||+.++||++.+++|++.+ +++|+|+|+|++++.+++++++++
T Consensus 165 i~~vG~~~~~Kg~~~li~a~~~~--------------------------------~~~l~i~G~g~~~~~l~~~~~~~~- 211 (342)
T 2iuy_A 165 LLFMGRVSPHKGALEAAAFAHAC--------------------------------GRRLVLAGPAWEPEYFDEITRRYG- 211 (342)
T ss_dssp EEEESCCCGGGTHHHHHHHHHHH--------------------------------TCCEEEESCCCCHHHHHHHHHHHT-
T ss_pred EEEEeccccccCHHHHHHHHHhc--------------------------------CcEEEEEeCcccHHHHHHHHHHhC-
Confidence 89999999999999999998864 478999999999999999999988
Q ss_pred CcEEEecCCCChhhHHHHHhhccEEEeeccCC-------CCCCCchhHHHHHHcCCeEEEeeeCCc
Q 015058 341 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSS-------SGLDLPMKVCYCWYSRYSLKLLWTCSV 399 (414)
Q Consensus 341 ~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~-------~g~~lP~kl~Eama~G~Pvi~s~~~~~ 399 (414)
.+|+|+| ++++++++.+|++||++|+++.+. ..+++|++++|||+||+|||+++++|.
T Consensus 212 ~~v~~~g-~~~~~~l~~~~~~adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~~~ 276 (342)
T 2iuy_A 212 STVEPIG-EVGGERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNGCL 276 (342)
T ss_dssp TTEEECC-CCCHHHHHHHHHHCSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTTTH
T ss_pred CCEEEec-cCCHHHHHHHHHhCCEEEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCCCh
Confidence 8999997 999999999999999999875411 157899999999999999999998754
No 13
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=99.95 E-value=2.8e-27 Score=235.43 Aligned_cols=203 Identities=12% Similarity=0.127 Sum_probs=158.5
Q ss_pred CCCcEEEEeCCCCchHHHHHHHHHhhcCC----eEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCC--EEEEe
Q 015058 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRS----AFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMAN--GCLCV 173 (414)
Q Consensus 100 ~~~Dvvh~~~pp~~~~~~~~~la~~~~~~----~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad--~ii~v 173 (414)
.+||+||+|++ .. .++.++.+..++ +++..+|.... . .... .+++.+.+| .++|+
T Consensus 80 ~~~Div~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~------~-~~~~--------~~~~~~~~~~~~ii~~ 140 (413)
T 3oy2_A 80 HKPDIVMIYND---PI-VIGNYLLAMGKCSHRTKIVLYVDLVSK------N-IREN--------LWWIFSHPKVVGVMAM 140 (413)
T ss_dssp HCCSEEEEEEC---HH-HHHHHHHHGGGCCSCCEEEEEECCCSB------S-CCGG--------GGGGGGCTTEEEEEES
T ss_pred cCCCEEEEcch---HH-HHHHHHHHhccCCCCCceeeeccccch------h-hHHH--------HHHHHhccCCceEEEc
Confidence 69999999965 22 334444554444 45566776532 1 1111 256778988 99999
Q ss_pred CHHHHHHHHHhhCC--cEEEecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccc
Q 015058 174 TQAMQHELAQNWGI--KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGID 250 (414)
Q Consensus 174 S~~~~~~l~~~~gi--~i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (414)
|+.+++.+.+ +|. ++.+|||+ |.+.| . +.+++++
T Consensus 141 S~~~~~~~~~-~~~~~~~~vi~ngvd~~~~--~------~~~~~~~---------------------------------- 177 (413)
T 3oy2_A 141 SKCWISDICN-YGCKVPINIVSHFVDTKTI--Y------DARKLVG---------------------------------- 177 (413)
T ss_dssp STHHHHHHHH-TTCCSCEEECCCCCCCCCC--T------THHHHTT----------------------------------
T ss_pred CHHHHHHHHH-cCCCCceEEeCCCCCHHHH--H------HHHHhcC----------------------------------
Confidence 9999999988 575 38999999 76666 1 1222322
Q ss_pred cccCC--CCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCCh
Q 015058 251 VFLKP--NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK 328 (414)
Q Consensus 251 ~~l~~--~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~ 328 (414)
+++ ++ .+++++||+.++||++.|++|++.+.++ .|+++|+|+|+|+..
T Consensus 178 --~~~~~~~-~~il~vGr~~~~Kg~~~li~a~~~l~~~---------------------------~~~~~l~ivG~g~~~ 227 (413)
T 3oy2_A 178 --LSEYNDD-VLFLNMNRNTARKRLDIYVLAAARFISK---------------------------YPDAKVRFLCNSHHE 227 (413)
T ss_dssp --CGGGTTS-EEEECCSCSSGGGTHHHHHHHHHHHHHH---------------------------CTTCCEEEEEECCTT
T ss_pred --CCcccCc-eEEEEcCCCchhcCcHHHHHHHHHHHHh---------------------------CCCcEEEEEeCCccc
Confidence 222 34 5899999999999999999999998763 688999999999876
Q ss_pred ------HHHHHHHHHcCCC-c-------EEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEe
Q 015058 329 ------ESYEEKIRRLRLK-R-------VAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLL 394 (414)
Q Consensus 329 ------e~l~~~i~~l~l~-~-------V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s 394 (414)
+.++++++++|++ + |.|.| ++++++++.+|++||++|+|+ ..+++|++++||||||+|||++
T Consensus 228 ~~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g-~~~~~~~~~~~~~adv~v~pS---~~E~~~~~~lEAma~G~PvI~s 303 (413)
T 3oy2_A 228 SKFDLHSIALRELVASGVDNVFTHLNKIMINRT-VLTDERVDMMYNACDVIVNCS---SGEGFGLCSAEGAVLGKPLIIS 303 (413)
T ss_dssp CSCCHHHHHHHHHHHHTCSCHHHHHTTEEEECS-CCCHHHHHHHHHHCSEEEECC---SCCSSCHHHHHHHTTTCCEEEE
T ss_pred chhhHHHHHHHHHHHcCcccccccccceeeccC-cCCHHHHHHHHHhCCEEEeCC---CcCCCCcHHHHHHHcCCCEEEc
Confidence 8999999999999 5 77776 999999999999999999863 3688999999999999999999
Q ss_pred eeCC
Q 015058 395 WTCS 398 (414)
Q Consensus 395 ~~~~ 398 (414)
+++|
T Consensus 304 ~~~g 307 (413)
T 3oy2_A 304 AVGG 307 (413)
T ss_dssp CCHH
T ss_pred CCCC
Confidence 9876
No 14
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.94 E-value=1.4e-26 Score=226.29 Aligned_cols=259 Identities=15% Similarity=0.080 Sum_probs=176.4
Q ss_pred HHHHHHHhhCCCcEEEEecCCCCCCcccccCCCeEEEEeecCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 015058 23 YQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASP 102 (414)
Q Consensus 23 ~~a~~La~~~g~eV~vv~~~~~~~~~~~~~~~~i~i~~v~~~~~~~~~~~~~~~~~~~l~k~l~~~~~l~~~l~~k~~~~ 102 (414)
..+..|+++ ||+|+++|..... ........+++++.++ ....... .....+......+... ..+++++ +..+|
T Consensus 25 ~la~~L~~~-G~~V~v~~~~~~~-~~~~~~~~g~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~-~~l~~~l-~~~~p 97 (364)
T 1f0k_A 25 AVAHHLMAQ-GWQVRWLGTADRM-EADLVPKHGIEIDFIR--ISGLRGK-GIKALIAAPLRIFNAW-RQARAIM-KAYKP 97 (364)
T ss_dssp HHHHHHHTT-TCEEEEEECTTST-HHHHGGGGTCEEEECC--CCCCTTC-CHHHHHTCHHHHHHHH-HHHHHHH-HHHCC
T ss_pred HHHHHHHHc-CCEEEEEecCCcc-hhhhccccCCceEEec--CCccCcC-ccHHHHHHHHHHHHHH-HHHHHHH-HhcCC
Confidence 466777775 9999999976532 2223344588888887 2211101 0011111111111111 1112222 23699
Q ss_pred cEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEeCHHHHHHHH
Q 015058 103 DVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELA 182 (414)
Q Consensus 103 Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS~~~~~~l~ 182 (414)
|+||++.+. ..+.+.++++..++|+|++.|+... . +.++++++.+|.+++.++..
T Consensus 98 Dvv~~~~~~---~~~~~~~~~~~~~~p~v~~~~~~~~----------~-------~~~~~~~~~~d~v~~~~~~~----- 152 (364)
T 1f0k_A 98 DVVLGMGGY---VSGPGGLAAWSLGIPVVLHEQNGIA----------G-------LTNKWLAKIATKVMQAFPGA----- 152 (364)
T ss_dssp SEEEECSST---THHHHHHHHHHTTCCEEEEECSSSC----------C-------HHHHHHTTTCSEEEESSTTS-----
T ss_pred CEEEEeCCc---CchHHHHHHHHcCCCEEEEecCCCC----------c-------HHHHHHHHhCCEEEecChhh-----
Confidence 999999762 2233556667789999999888521 1 13457778999999998764
Q ss_pred HhhCCcEEEecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccccCCCCCeEE
Q 015058 183 QNWGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALV 261 (414)
Q Consensus 183 ~~~gi~i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i 261 (414)
+. ++.+++|+ +.+.|.+.. .+ +++ +++++++.++
T Consensus 153 --~~-~~~~i~n~v~~~~~~~~~--~~----~~~------------------------------------~~~~~~~~il 187 (364)
T 1f0k_A 153 --FP-NAEVVGNPVRTDVLALPL--PQ----QRL------------------------------------AGREGPVRVL 187 (364)
T ss_dssp --SS-SCEECCCCCCHHHHTSCC--HH----HHH------------------------------------TTCCSSEEEE
T ss_pred --cC-CceEeCCccchhhcccch--hh----hhc------------------------------------ccCCCCcEEE
Confidence 22 57789998 555554432 11 122 2334555567
Q ss_pred EEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEE-EEEEcCCCChHHHHHHHHHcCC
Q 015058 262 VSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLL-FIITGKGPDKESYEEKIRRLRL 340 (414)
Q Consensus 262 ~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~-liI~G~G~~~e~l~~~i~~l~l 340 (414)
++.|++.++|+++.+++|++.+.+ +++ ++|+|+|+ .+++++.++++++
T Consensus 188 ~~~g~~~~~k~~~~li~a~~~l~~------------------------------~~~~l~i~G~~~-~~~l~~~~~~~~~ 236 (364)
T 1f0k_A 188 VVGGSQGARILNQTMPQVAAKLGD------------------------------SVTIWHQSGKGS-QQSVEQAYAEAGQ 236 (364)
T ss_dssp EECTTTCCHHHHHHHHHHHHHHGG------------------------------GEEEEEECCTTC-HHHHHHHHHHTTC
T ss_pred EEcCchHhHHHHHHHHHHHHHhcC------------------------------CcEEEEEcCCch-HHHHHHHHhhcCC
Confidence 788899999999999999998751 577 57899998 5889999999998
Q ss_pred CcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCCc
Q 015058 341 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCSV 399 (414)
Q Consensus 341 ~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~~ 399 (414)
++|.|.| ++ ++++.+|+.||++|+++ | |++++|||+||+|||+++++|.
T Consensus 237 ~~v~~~g-~~--~~~~~~~~~ad~~v~~s----g---~~~~~EAma~G~Pvi~~~~~g~ 285 (364)
T 1f0k_A 237 PQHKVTE-FI--DDMAAAYAWADVVVCRS----G---ALTVSEIAAAGLPALFVPFQHK 285 (364)
T ss_dssp TTSEEES-CC--SCHHHHHHHCSEEEECC----C---HHHHHHHHHHTCCEEECCCCCT
T ss_pred CceEEec-ch--hhHHHHHHhCCEEEECC----c---hHHHHHHHHhCCCEEEeeCCCC
Confidence 8999998 65 89999999999999752 3 9999999999999999998863
No 15
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=99.94 E-value=4.4e-25 Score=232.70 Aligned_cols=227 Identities=14% Similarity=0.021 Sum_probs=157.0
Q ss_pred CCCcEEEEeCCCCchHHHHHHHHHh-------hcCCeEEEEEcCcchhh----hhhc-cCC-CcHHHHH-----------
Q 015058 100 ASPDVFLVQNPPSVPTLVAVKWASS-------LRRSAFIVDWHNFGYTL----LSLS-LGR-RSHFVSI----------- 155 (414)
Q Consensus 100 ~~~Dvvh~~~pp~~~~~~~~~la~~-------~~~~~~Iv~~H~~~~~l----~~~~-~~~-~~~~~~i----------- 155 (414)
..+||+|+|++ .+++++.+++. +.++|+|+|+|+..+.- .... .+. .......
T Consensus 152 ~~ddIiH~hDW---~t~l~~~~l~~~~~~~~~~~~~~~V~TiHnl~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (536)
T 3vue_A 152 GEDVVFVCNDW---HTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPVE 228 (536)
T ss_dssp CSCEEEEEESG---GGSTHHHHHHHHTTTTTSSTTCEEEEEESCTTCCCEEEGGGGGGGCCCGGGHHHHEEEETTTSTTC
T ss_pred CCCEEEEECcc---hHHHHHHHHHHhhhhhhhhcccceeeeecCcccccccchhhhhhcCCchhhcchhhhhhccccccc
Confidence 35678899987 55555544442 24799999999863210 0000 010 0000000
Q ss_pred --HHHHHHHHhccCCEEEEeCHHHHHHHHHhhCC-----------cEEEecCC-CCCCcCCCCh-------------H--
Q 015058 156 --YRWIEKYYGKMANGCLCVTQAMQHELAQNWGI-----------KATVLYDQ-PPEFFHPTSL-------------E-- 206 (414)
Q Consensus 156 --~~~~Ek~~~k~ad~ii~vS~~~~~~l~~~~gi-----------~i~vI~n~-~~~~f~p~~~-------------~-- 206 (414)
.-.++|.....||.|+|||+.+++++.+.++. ++.+|+|| |.+.|.|... +
T Consensus 229 ~~~~n~~k~~i~~ad~v~tVS~~~a~ei~~~~~~g~~l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~~~~~~K 308 (536)
T 3vue_A 229 GRKINWMKAGILEADRVLTVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAK 308 (536)
T ss_dssp EEEEEHHHHHHHHCSEEEESCHHHHHHHHTTCCCCSSSCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTTTHHHHH
T ss_pred ccchhHHHHHHHhccEEEEcCHHHhhhhhcccccccccccccccCCeEEEECCcchhhcCCCCccccccccchhhhhhhh
Confidence 00134566678999999999999998765432 38999999 8888887421 1
Q ss_pred --HHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccccCCCCCeEEEEeccCCCCCChHHHHHHHHHhH
Q 015058 207 --EKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYD 284 (414)
Q Consensus 207 --~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~ 284 (414)
.|..++++++ +..+++.| +|+++||++++||++.|++|+..+.
T Consensus 309 ~~~k~~l~~~~g----------------------------------l~~d~~~p-~i~~vgRl~~~Kg~~~li~a~~~l~ 353 (536)
T 3vue_A 309 ALNKEALQAEAG----------------------------------LPVDRKIP-LIAFIGRLEEQKGPDVMAAAIPELM 353 (536)
T ss_dssp HHHHHHHHHHTT----------------------------------SCCCTTSC-EEEEECCBSGGGCHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcC----------------------------------CCCCCCCc-EEEEEeeccccCChHHHHHHHHHhH
Confidence 1223333322 12245666 9999999999999999999999886
Q ss_pred HHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChH--HHHHHHHHcCCCcEEEecCCCChhhHHHHHhhc
Q 015058 285 RRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKE--SYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSA 362 (414)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e--~l~~~i~~l~l~~V~f~g~~v~~ed~~~~l~~a 362 (414)
+ ++.+|+|+|.|+... .+++...+++. +|.|.+ ..+.++++.+|++|
T Consensus 354 ~-----------------------------~~~~l~l~G~G~~~~~~~~~~~~~~~~~-~v~~~~-~~~~~~~~~~~~~a 402 (536)
T 3vue_A 354 Q-----------------------------EDVQIVLLGTGKKKFEKLLKSMEEKYPG-KVRAVV-KFNAPLAHLIMAGA 402 (536)
T ss_dssp T-----------------------------SSCEEEEECCBCHHHHHHHHHHHHHSTT-TEEEEC-SCCHHHHHHHHHHC
T ss_pred h-----------------------------hCCeEEEEeccCchHHHHHHHHHhhcCC-ceEEEE-eccHHHHHHHHHhh
Confidence 4 356888888887543 44444444332 789987 77999999999999
Q ss_pred cEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCC
Q 015058 363 DLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCS 398 (414)
Q Consensus 363 Dl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~ 398 (414)
|+||+|+ ..|++|+.++|||+||+|||+|+++|
T Consensus 403 D~~v~PS---~~E~fgl~~lEAma~G~PvI~s~~gG 435 (536)
T 3vue_A 403 DVLAVPS---RFEPCGLIQLQGMRYGTPCACASTGG 435 (536)
T ss_dssp SEEEECC---SCCSSCSHHHHHHHTTCCEEECSCTH
T ss_pred heeeccc---ccCCCCHHHHHHHHcCCCEEEcCCCC
Confidence 9999874 35789999999999999999999875
No 16
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=99.94 E-value=2.1e-26 Score=233.14 Aligned_cols=288 Identities=12% Similarity=0.047 Sum_probs=180.8
Q ss_pred EEEEEEeCCC--C--CChHHHHHHHHHHhhCCCcEEEEecCCCC-------C-------CcccccCCCeEEEEeecCCCC
Q 015058 6 RACVVVLGDL--G--RSPRMQYQALSLARQMSLEVDVVAYGGSK-------P-------HAAILEHPSIHIHTMTQWPTI 67 (414)
Q Consensus 6 ~~~v~~~~d~--~--~~~r~~~~a~~La~~~g~eV~vv~~~~~~-------~-------~~~~~~~~~i~i~~v~~~~~~ 67 (414)
+|+|+.+++. . ..+...+.++.|+++ | +|+|++..... . .......+++++++.+.+..+
T Consensus 14 ~MkIl~is~~~~p~~~~~~~~~l~~~l~~~-G-~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~~~~ 91 (406)
T 2hy7_A 14 RPCYLVLSSHDFRTPRRANIHFITDQLALR-G-TTRFFSLRYSRLSRMKGDMRLPLDDTANTVVSHNGVDCYLWRTTVHP 91 (406)
T ss_dssp CSCEEEEESSCTTSSSCCHHHHHHHHHHHH-S-CEEEEECSCBTTHHHHTCTTGGGGGGTTSEEEETTEEEEECCBSSCC
T ss_pred CceEEEEecccCCChhhhhHhHHHHHHHhC-C-ceEEEEecccHHHHhhccchhhhhccCccceecCCeEEEeeccccCC
Confidence 3555555543 2 334556777888887 9 99999643110 0 011112468888876522211
Q ss_pred CCCCCCchHHHHHHHHHHHH--HHHHHHHHhhhcCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhc
Q 015058 68 PRGLPKVLKPVLLLLKPLIQ--FFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLS 145 (414)
Q Consensus 68 ~~~~~~~~~~~~~l~k~l~~--~~~l~~~l~~k~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~ 145 (414)
..........+......... +...+..+ ..++|+||.++. ....++.+ ++..++|+++++|+.... ..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~DvIh~~~~---~~~~~~~~-~~~~~~p~v~~~h~~~~~-~~-- 161 (406)
T 2hy7_A 92 FNTRRSWLRPVEDAMFRWYAAHPPKQLLDW---MRESDVIVFESG---IAVAFIEL-AKRVNPAAKLVYRASDGL-ST-- 161 (406)
T ss_dssp CCCCCGGGHHHHHHHHHHHHHCCCHHHHHH---HHHCSEEEEESS---GGGGGHHH-HHHHCTTSEEEEEESSCH-HH--
T ss_pred ccccchhhhccchhHHHHHHHhHHHHHHHH---hcCCCEEEECCc---hHHHHHHH-HHHhCCCEEEEEeccchh-hc--
Confidence 11011111111110000000 00011111 137999995433 22111223 345689999999975420 00
Q ss_pred cCCCcHHHHHHHHHHHHHhccCCEEEEeCHHHHHHHHHhhCCcEEEecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCC
Q 015058 146 LGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQNWGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLG 224 (414)
Q Consensus 146 ~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS~~~~~~l~~~~gi~i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~ 224 (414)
.... ...+++++..++.||.++|+|+.+++.+.+. + ++.+|||| |.+.|.|...
T Consensus 162 ~~~~----~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~-~-~i~vipngvd~~~f~~~~~------------------- 216 (406)
T 2hy7_A 162 INVA----SYIEREFDRVAPTLDVIALVSPAMAAEVVSR-D-NVFHVGHGVDHNLDQLGDP------------------- 216 (406)
T ss_dssp HTCC----HHHHHHHHHHGGGCSEEEESCGGGGGGCSCS-T-TEEECCCCBCTTHHHHHCS-------------------
T ss_pred cccc----HHHHHHHHHHHHhCCEEEEcCHHHHHHHHhc-C-CEEEEcCCcChHhcCcccc-------------------
Confidence 1111 2345677888899999999999999988654 5 89999999 7665533210
Q ss_pred ccccccCCCCCCCCccceeeeccccccccCCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhh
Q 015058 225 VQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLK 304 (414)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~ 304 (414)
. +.+...+++|+||+.++||+ ++ .+.+
T Consensus 217 ---------------------------~-~~~~~~~i~~vGrl~~~Kg~---~~---~l~~------------------- 243 (406)
T 2hy7_A 217 ---------------------------S-PYAEGIHAVAVGSMLFDPEF---FV---VASK------------------- 243 (406)
T ss_dssp ---------------------------C-SCCSSEEEEEECCTTBCHHH---HH---HHHH-------------------
T ss_pred ---------------------------c-ccCCCcEEEEEeccccccCH---HH---HHHH-------------------
Confidence 0 11222489999999999998 33 3333
Q ss_pred hhcCCccCCCCcEEEEEEcCCCChHHHHHHHHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHH
Q 015058 305 EISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCY 383 (414)
Q Consensus 305 ~~~~~~~~~~p~i~liI~G~G~~~e~l~~~i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~E 383 (414)
..|+++|+|+|+|+ ++++++. +|+|+| +++.+|++.+|++||++|+|+. .+++|++++|
T Consensus 244 --------~~~~~~l~ivG~g~--------~~~~~l~~~V~f~G-~~~~~~l~~~~~~adv~v~ps~---~E~~~~~~lE 303 (406)
T 2hy7_A 244 --------AFPQVTFHVIGSGM--------GRHPGYGDNVIVYG-EMKHAQTIGYIKHARFGIAPYA---SEQVPVYLAD 303 (406)
T ss_dssp --------HCTTEEEEEESCSS--------CCCTTCCTTEEEEC-CCCHHHHHHHHHTCSEEECCBS---CSCCCTTHHH
T ss_pred --------hCCCeEEEEEeCch--------HHhcCCCCCEEEcC-CCCHHHHHHHHHhcCEEEECCC---cccCchHHHH
Confidence 25789999999998 6677887 999997 9999999999999999998743 4678888888
Q ss_pred HH-------HcCCeEEEeee--CCcccch
Q 015058 384 CW-------YSRYSLKLLWT--CSVVGCL 403 (414)
Q Consensus 384 am-------a~G~Pvi~s~~--~~~~~~~ 403 (414)
|| |||+|||+|++ .+.+|.+
T Consensus 304 Am~Kl~eYla~G~PVIas~~v~~~~~G~l 332 (406)
T 2hy7_A 304 SSMKLLQYDFFGLPAVCPNAVVGPYKSRF 332 (406)
T ss_dssp HCHHHHHHHHHTCCEEEEGGGTCSCSSEE
T ss_pred HHHHHHHHhhCCCcEEEehhcccCcceEE
Confidence 88 99999999985 4556766
No 17
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=99.92 E-value=1.4e-23 Score=213.82 Aligned_cols=197 Identities=13% Similarity=0.081 Sum_probs=139.7
Q ss_pred CCCcEEEEeCCCCchHHHHHHHHH-h------hcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCC--EE
Q 015058 100 ASPDVFLVQNPPSVPTLVAVKWAS-S------LRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMAN--GC 170 (414)
Q Consensus 100 ~~~Dvvh~~~pp~~~~~~~~~la~-~------~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad--~i 170 (414)
.+||+||++.+ .+..++..+. + ..+.|++..+|++... +..... .+++++..++.++ .+
T Consensus 131 ~~~Dvv~a~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-----~~~~~~----~~~~~~~~~~~~~~~~v 198 (413)
T 2x0d_A 131 AKHDIFIATAW---WTAYAAQRIVSWQSDTYGIPPNKILYIIQDFEPG-----FYQWSS----QYVLAESTYKYRGPQIA 198 (413)
T ss_dssp CTTEEEEECSH---HHHHHHHHHHHHHHHHHTCCCCCEEEEECSCGGG-----GSCSSH----HHHHHHHTTSCCSCEEE
T ss_pred CCCCEEEEehH---HHHHHHHHhhhhhhhhcccccCcEEEEEeechhh-----cCccCh----HHHHHHHHhccCCceEE
Confidence 58999999875 3333332221 0 1256777777776321 111121 1234566677765 68
Q ss_pred EEeCHHHHHHHHHhhCCc---EEEecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeec
Q 015058 171 LCVTQAMQHELAQNWGIK---ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSL 246 (414)
Q Consensus 171 i~vS~~~~~~l~~~~gi~---i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (414)
+|+|+.+++.+.+. |.+ +.+++|+ |.+.|.+..
T Consensus 199 i~~S~~~~~~l~~~-g~~~~~~~~i~~g~d~~~~~~~~------------------------------------------ 235 (413)
T 2x0d_A 199 VFNSELLKQYFNNK-GYNFTDEYFFQPKINTTLKNYIN------------------------------------------ 235 (413)
T ss_dssp EEESHHHHHHHHHH-TCCCSEEEEECCCCCHHHHTTTT------------------------------------------
T ss_pred EEcCHHHHHHHHHc-CCCCCceEEeCCCcCchhhcccc------------------------------------------
Confidence 99999999999875 543 7788887 443332210
Q ss_pred cccccccCCCCCeEEEEeccC-CCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCc---EEEEEE
Q 015058 247 AGIDVFLKPNRPALVVSSTSW-TPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPR---LLFIIT 322 (414)
Q Consensus 247 ~~~~~~l~~~~~~~i~~vgrl-~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~---i~liI~ 322 (414)
...++++ .|+++||+ .++||++.||+|++.+.++ +|+ ++|+|+
T Consensus 236 -----~~~~~~~-~il~~gr~~~~~Kg~~~li~A~~~l~~~---------------------------~~~~~~~~l~iv 282 (413)
T 2x0d_A 236 -----DKRQKEK-IILVYGRPSVKRNAFTLIVEALKIFVQK---------------------------YDRSNEWKIISV 282 (413)
T ss_dssp -----SCCCCCS-EEEEEECTTCGGGCHHHHHHHHHHHHHH---------------------------CTTGGGCEEEEE
T ss_pred -----cccCCCC-EEEEEecCchhccCHHHHHHHHHHHHHh---------------------------CCCCCceEEEEE
Confidence 0112333 67788996 7899999999999998763 453 899999
Q ss_pred cCCCChHHHHHHHHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEee
Q 015058 323 GKGPDKESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLW 395 (414)
Q Consensus 323 G~G~~~e~l~~~i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~ 395 (414)
|+|+.+ .++++. +|+|+| +++.+|++.+|++||+||+++. .+++|++++||||||+|||+++
T Consensus 283 G~~~~~-------~~l~~~~~v~f~G-~~~~~~l~~~~~~adv~v~pS~---~E~~g~~~lEAmA~G~PVV~~~ 345 (413)
T 2x0d_A 283 GEKHKD-------IALGKGIHLNSLG-KLTLEDYADLLKRSSIGISLMI---SPHPSYPPLEMAHFGLRVITNK 345 (413)
T ss_dssp ESCCCC-------EEEETTEEEEEEE-SCCHHHHHHHHHHCCEEECCCS---SSSCCSHHHHHHHTTCEEEEEC
T ss_pred cCCchh-------hhcCCcCcEEEcC-CCCHHHHHHHHHhCCEEEEecC---CCCCCcHHHHHHhCCCcEEEeC
Confidence 999875 356777 999998 9999999999999999997643 3578899999999999999954
No 18
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.91 E-value=3.4e-24 Score=209.75 Aligned_cols=208 Identities=12% Similarity=-0.011 Sum_probs=145.1
Q ss_pred cCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCC-CcHHHHHHHHHHHHHhccCCEEEEeCHHH
Q 015058 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGR-RSHFVSIYRWIEKYYGKMANGCLCVTQAM 177 (414)
Q Consensus 99 ~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~-~~~~~~i~~~~Ek~~~k~ad~ii~vS~~~ 177 (414)
..+||+||+|++. ...+++.++++..++|+|++.|+.. + ... ..+.. ...++.+.+.+|.++|+|+..
T Consensus 93 ~~~pDvv~~~~~~--~~~~~~~~~~~~~~ip~v~~~~~~~-~-----~~~~~~~~~---~~~~~~~~~~~d~ii~~s~~~ 161 (375)
T 3beo_A 93 EAKPDIVLVHGDT--TTTFIASLAAFYNQIPVGHVEAGLR-T-----WDKYSPYPE---EMNRQLTGVMADLHFSPTAKS 161 (375)
T ss_dssp HHCCSEEEEETTS--HHHHHHHHHHHHTTCCEEEESCCCC-C-----SCTTSSTTH---HHHHHHHHHHCSEEEESSHHH
T ss_pred HhCCCEEEEeCCc--hHHHHHHHHHHHHCCCEEEEecccc-c-----ccccCCChh---HhhhhHHhhhhheeeCCCHHH
Confidence 3699999998752 2334455667778999998777652 1 111 11111 123345556799999999999
Q ss_pred HHHHHHhhCCc---EEEecCC--CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccc
Q 015058 178 QHELAQNWGIK---ATVLYDQ--PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVF 252 (414)
Q Consensus 178 ~~~l~~~~gi~---i~vI~n~--~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (414)
++.+.+ +|++ +.+++|+ |...|.+... .+.+++++
T Consensus 162 ~~~~~~-~g~~~~~i~vi~n~~~d~~~~~~~~~-~~~~~~~~-------------------------------------- 201 (375)
T 3beo_A 162 ATNLQK-ENKDESRIFITGNTAIDALKTTVKET-YSHPVLEK-------------------------------------- 201 (375)
T ss_dssp HHHHHH-TTCCGGGEEECCCHHHHHHHHHCCSS-CCCHHHHT--------------------------------------
T ss_pred HHHHHH-cCCCcccEEEECChhHhhhhhhhhhh-hhHHHHHh--------------------------------------
Confidence 999876 4764 8899998 4333333210 11122222
Q ss_pred cCCCCCeEEEEeccCCCC-CChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHH
Q 015058 253 LKPNRPALVVSSTSWTPD-EDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESY 331 (414)
Q Consensus 253 l~~~~~~~i~~vgrl~~~-Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l 331 (414)
++ +++++++++||+.+. ||++.|++|++.+.++ +|+++++ +|.|+. +++
T Consensus 202 ~~-~~~~vl~~~gr~~~~~K~~~~li~a~~~l~~~---------------------------~~~~~~i-~~~g~~-~~~ 251 (375)
T 3beo_A 202 LG-NNRLVLMTAHRRENLGEPMRNMFRAIKRLVDK---------------------------HEDVQVV-YPVHMN-PVV 251 (375)
T ss_dssp TT-TSEEEEEECCCGGGTTHHHHHHHHHHHHHHHH---------------------------CTTEEEE-EECCSC-HHH
T ss_pred cc-CCCeEEEEecccccchhHHHHHHHHHHHHHhh---------------------------CCCeEEE-EeCCCC-HHH
Confidence 11 334578899999886 9999999999998763 6788865 477876 456
Q ss_pred HHHHHHc-CC-CcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeee
Q 015058 332 EEKIRRL-RL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWT 396 (414)
Q Consensus 332 ~~~i~~l-~l-~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~ 396 (414)
++.++++ +. .+|+|.| +++.+|++.+|++||++|+++ +..++|||+||+|||+++.
T Consensus 252 ~~~~~~~~~~~~~v~~~g-~~~~~~~~~~~~~ad~~v~~s--------g~~~lEA~a~G~Pvi~~~~ 309 (375)
T 3beo_A 252 RETANDILGDYGRIHLIE-PLDVIDFHNVAARSYLMLTDS--------GGVQEEAPSLGVPVLVLRD 309 (375)
T ss_dssp HHHHHHHHTTCTTEEEEC-CCCHHHHHHHHHTCSEEEECC--------HHHHHHHHHHTCCEEECSS
T ss_pred HHHHHHHhhccCCEEEeC-CCCHHHHHHHHHhCcEEEECC--------CChHHHHHhcCCCEEEecC
Confidence 6666664 43 4899997 888899999999999999753 4568999999999999954
No 19
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.89 E-value=6e-23 Score=201.88 Aligned_cols=214 Identities=12% Similarity=0.018 Sum_probs=144.9
Q ss_pred cCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCC-CcHHHHHHHHHHHHHhccCCEEEEeCHHH
Q 015058 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGR-RSHFVSIYRWIEKYYGKMANGCLCVTQAM 177 (414)
Q Consensus 99 ~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~-~~~~~~i~~~~Ek~~~k~ad~ii~vS~~~ 177 (414)
..+||+||+|.+. ...+.+.++++..++|+|++.|+... +.. ..+... ...+++.+.+|.++|+|+..
T Consensus 84 ~~~pDvv~~~~~~--~~~~~~~~~a~~~~ip~v~~~~~~~~------~~~~~~~~~~---~~~~~~~~~~d~ii~~s~~~ 152 (384)
T 1vgv_A 84 EFKPDVVLVHGDT--TTTLATSLAAFYQRIPVGHVEAGLRT------GDLYSPWPEE---ANRTLTGHLAMYHFSPTETS 152 (384)
T ss_dssp HHCCSEEEEETTC--HHHHHHHHHHHTTTCCEEEESCCCCC------SCTTSSTTHH---HHHHHHHTTCSEEEESSHHH
T ss_pred HhCCCEEEEeCCc--hHHHHHHHHHHHHCCCEEEEeccccc------ccccCCCchH---hhHHHHHhhccEEEcCcHHH
Confidence 3699999999751 23344556667789999988887631 111 111111 12234467899999999999
Q ss_pred HHHHHHhhCCc---EEEecCC--CCCCcCCCC----hHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccc
Q 015058 178 QHELAQNWGIK---ATVLYDQ--PPEFFHPTS----LEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAG 248 (414)
Q Consensus 178 ~~~l~~~~gi~---i~vI~n~--~~~~f~p~~----~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (414)
++.+.+ +|++ +.+++|+ |...+.+.. ...+.+++++
T Consensus 153 ~~~l~~-~g~~~~~i~vi~n~~~d~~~~~~~~~~~~~~~~~~~~~~---------------------------------- 197 (384)
T 1vgv_A 153 RQNLLR-ENVADSRIFITGNTVIDALLWVRDQVMSSDKLRSELAAN---------------------------------- 197 (384)
T ss_dssp HHHHHH-TTCCGGGEEECCCHHHHHHHHHHHHTTTCHHHHHHHHTT----------------------------------
T ss_pred HHHHHH-cCCChhhEEEeCChHHHHHHhhhhccccchhhhHHHHHh----------------------------------
Confidence 999876 4774 8889988 221111100 0001122322
Q ss_pred cccc-cCCCCCeEEEEeccCCCC-CChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEE-cCC
Q 015058 249 IDVF-LKPNRPALVVSSTSWTPD-EDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIIT-GKG 325 (414)
Q Consensus 249 ~~~~-l~~~~~~~i~~vgrl~~~-Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~-G~G 325 (414)
++ ++++++.+++++||+.+. ||++.|++|+..+.++ .|+++|++. |+|
T Consensus 198 --~~~~~~~~~~vl~~~gr~~~~~kg~~~li~a~~~l~~~---------------------------~~~~~l~i~~g~~ 248 (384)
T 1vgv_A 198 --YPFIDPDKKMILVTGHRRESFGRGFEEICHALADIATT---------------------------HQDIQIVYPVHLN 248 (384)
T ss_dssp --CTTCCTTSEEEEEECCCBSSCCHHHHHHHHHHHHHHHH---------------------------CTTEEEEEECCBC
T ss_pred --ccccCCCCCEEEEEeCCccccchHHHHHHHHHHHHHhh---------------------------CCCeEEEEEcCCC
Confidence 23 434455688899999886 9999999999998763 578999885 655
Q ss_pred C-ChHHHHHHHHHcCCCcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeee-CC
Q 015058 326 P-DKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWT-CS 398 (414)
Q Consensus 326 ~-~~e~l~~~i~~l~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~-~~ 398 (414)
+ .++.+++.++. ..+|.|.| +++.+|++.+|++||++|+++ +..++|||+||+|||+++. +|
T Consensus 249 ~~~~~~l~~~~~~--~~~v~~~g-~~~~~~~~~~~~~ad~~v~~S--------g~~~lEA~a~G~PvI~~~~~~~ 312 (384)
T 1vgv_A 249 PNVREPVNRILGH--VKNVILID-PQEYLPFVWLMNHAWLILTDS--------GGIQEEAPSLGKPVLVMRDTTE 312 (384)
T ss_dssp HHHHHHHHHHHTT--CTTEEEEC-CCCHHHHHHHHHHCSEEEESS--------STGGGTGGGGTCCEEEESSCCS
T ss_pred HHHHHHHHHHhhc--CCCEEEeC-CCCHHHHHHHHHhCcEEEECC--------cchHHHHHHcCCCEEEccCCCC
Confidence 4 34455544322 24899987 888899999999999999753 1237899999999999986 44
No 20
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.89 E-value=4e-23 Score=214.78 Aligned_cols=199 Identities=12% Similarity=0.053 Sum_probs=144.9
Q ss_pred CCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEeCHHHHH
Q 015058 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH 179 (414)
Q Consensus 100 ~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS~~~~~ 179 (414)
.+|||||.++..+... .++.++. +..|++++||+.+.+ .+.. ...+..+|.++++|+..++
T Consensus 281 ~~~Div~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~-----~~~~-----------~~~~~~~d~~i~~s~~~~~ 341 (568)
T 2vsy_A 281 HGIDLLFDLRGWGGGG-RPEVFAL--RPAPVQVNWLAYPGT-----SGAP-----------WMDYVLGDAFALPPALEPF 341 (568)
T ss_dssp TTCSEEEECSSCTTCS-SCHHHHT--CCSSEEEEESSSSSC-----CCCT-----------TCCEEEECTTTSCTTTGGG
T ss_pred CCCCEEEECCCCCCcc-hHHHHhc--CCCceeEeeecCCcc-----cCCC-----------CceEEEECCCcCCcccccC
Confidence 7999999875422111 1223333 346888889886431 1100 1223468999999987643
Q ss_pred HHHHhhCCcEEEecCCCCCCcCCCChH---HHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccccCCC
Q 015058 180 ELAQNWGIKATVLYDQPPEFFHPTSLE---EKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPN 256 (414)
Q Consensus 180 ~l~~~~gi~i~vI~n~~~~~f~p~~~~---~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 256 (414)
++.++.+|||. |.|.+.. .+...+ ..++++++
T Consensus 342 -----~~~~i~~ipn~----~~~~~~~~~~~~~~~r------------------------------------~~~~~~~~ 376 (568)
T 2vsy_A 342 -----YSEHVLRLQGA----FQPSDTSRVVAEPPSR------------------------------------TQCGLPEQ 376 (568)
T ss_dssp -----CSSEEEECSSC----SCCCCTTCCCCCCCCT------------------------------------GGGTCCTT
T ss_pred -----CcceeEcCCCc----CCCCCCCCCCCCCCCc------------------------------------cccCCCCC
Confidence 45568999984 3332100 000111 12345544
Q ss_pred CCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEc-CCCChHHHHHHH
Q 015058 257 RPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITG-KGPDKESYEEKI 335 (414)
Q Consensus 257 ~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G-~G~~~e~l~~~i 335 (414)
. +++++||+.+ ||++.+++|+..+.++ .|+++|+|+| +|+.++++++.+
T Consensus 377 ~--~v~~~g~~~~-K~~~~li~a~~~l~~~---------------------------~~~~~l~i~G~~g~~~~~l~~~~ 426 (568)
T 2vsy_A 377 G--VVLCCFNNSY-KLNPQSMARMLAVLRE---------------------------VPDSVLWLLSGPGEADARLRAFA 426 (568)
T ss_dssp S--CEEEECCCGG-GCCHHHHHHHHHHHHH---------------------------CTTCEEEEECCSTTHHHHHHHHH
T ss_pred C--EEEEeCCccc-cCCHHHHHHHHHHHHh---------------------------CCCcEEEEecCCHHHHHHHHHHH
Confidence 3 5669999999 9999999999998763 6899999999 999999999999
Q ss_pred HHcCCC--cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEE-------eeeC
Q 015058 336 RRLRLK--RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKL-------LWTC 397 (414)
Q Consensus 336 ~~l~l~--~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~-------s~~~ 397 (414)
+++|++ +|+|+| +++.+|++.+|+.||++|.|+. . ++|++++|||+||+|||+ |+++
T Consensus 427 ~~~~l~~~~v~~~g-~~~~~~~~~~~~~adv~v~ps~---~-~~g~~~lEAma~G~Pvv~~~g~~~~s~~~ 492 (568)
T 2vsy_A 427 HAQGVDAQRLVFMP-KLPHPQYLARYRHADLFLDTHP---Y-NAHTTASDALWTGCPVLTTPGETFAARVA 492 (568)
T ss_dssp HHTTCCGGGEEEEC-CCCHHHHHHHGGGCSEEECCSS---S-CCSHHHHHHHHTTCCEEBCCCSSGGGSHH
T ss_pred HHcCCChhHEEeeC-CCCHHHHHHHHhcCCEEeeCCC---C-CCcHHHHHHHhCCCCEEeccCCCchHHHH
Confidence 999995 899997 9999999999999999997632 3 789999999999999999 8887
No 21
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.86 E-value=2.5e-22 Score=197.57 Aligned_cols=206 Identities=15% Similarity=0.028 Sum_probs=139.1
Q ss_pred cCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCC-CcHHHHHHHHHHHHHhccCCEEEEeCHHH
Q 015058 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGR-RSHFVSIYRWIEKYYGKMANGCLCVTQAM 177 (414)
Q Consensus 99 ~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~-~~~~~~i~~~~Ek~~~k~ad~ii~vS~~~ 177 (414)
..+||+||+|.++ ...+.+.++++..++|++...|+.. + +.. ..+.. ...++++.+.+|.++++|+..
T Consensus 89 ~~~pDvv~~~~~~--~~~~~~~~~a~~~~ip~v~~~~~~~-~-----~~~~~~~~~---~~~~~~~~~~~~~~~~~s~~~ 157 (376)
T 1v4v_A 89 EMGADYVLVHGDT--LTTFAVAWAAFLEGIPVGHVEAGLR-S-----GNLKEPFPE---EANRRLTDVLTDLDFAPTPLA 157 (376)
T ss_dssp HTTCSEEEEESSC--HHHHHHHHHHHHTTCCEEEETCCCC-C-----SCTTSSTTH---HHHHHHHHHHCSEEEESSHHH
T ss_pred HcCCCEEEEeCCh--HHHHHHHHHHHHhCCCEEEEeCCCc-c-----ccccCCCch---HHHHHHHHHHhceeeCCCHHH
Confidence 4799999999762 2334455677778999864333331 1 111 11111 133456778899999999999
Q ss_pred HHHHHHhhCCc---EEEecCCCCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccccC
Q 015058 178 QHELAQNWGIK---ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLK 254 (414)
Q Consensus 178 ~~~l~~~~gi~---i~vI~n~~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 254 (414)
++.+.+. |++ +.+++|+-.+.+.+. .-+..+ .. .++
T Consensus 158 ~~~l~~~-g~~~~ki~vi~n~~~d~~~~~------~~~~~~--------------------------------~~--~~~ 196 (376)
T 1v4v_A 158 KANLLKE-GKREEGILVTGQTGVDAVLLA------AKLGRL--------------------------------PE--GLP 196 (376)
T ss_dssp HHHHHTT-TCCGGGEEECCCHHHHHHHHH------HHHCCC--------------------------------CT--TCC
T ss_pred HHHHHHc-CCCcceEEEECCchHHHHhhh------hhhhHH--------------------------------HH--hcC
Confidence 9998764 765 778887611111000 000000 00 112
Q ss_pred CCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEE-cCCC-ChHHHH
Q 015058 255 PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIIT-GKGP-DKESYE 332 (414)
Q Consensus 255 ~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~-G~G~-~~e~l~ 332 (414)
+++.+++++||+.+.||++.|++|++.+.++ +|+++++++ |+|+ .++.++
T Consensus 197 -~~~~vl~~~gr~~~~k~~~~ll~a~~~l~~~---------------------------~~~~~lv~~~g~~~~~~~~l~ 248 (376)
T 1v4v_A 197 -EGPYVTVTMHRRENWPLLSDLAQALKRVAEA---------------------------FPHLTFVYPVHLNPVVREAVF 248 (376)
T ss_dssp -SSCEEEECCCCGGGGGGHHHHHHHHHHHHHH---------------------------CTTSEEEEECCSCHHHHHHHH
T ss_pred -CCCEEEEEeCcccchHHHHHHHHHHHHHHhh---------------------------CCCeEEEEECCCCHHHHHHHH
Confidence 3345788899998888999999999998763 678888885 8776 466777
Q ss_pred HHHHHcCCCcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEee
Q 015058 333 EKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLW 395 (414)
Q Consensus 333 ~~i~~l~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~ 395 (414)
++++. ..+|.|+| ++...|++.+|++||++|+++ .+ .++|||+||+|||++.
T Consensus 249 ~~~~~--~~~v~~~g-~~g~~~~~~~~~~ad~~v~~S-----~g---~~lEA~a~G~PvI~~~ 300 (376)
T 1v4v_A 249 PVLKG--VRNFVLLD-PLEYGSMAALMRASLLLVTDS-----GG---LQEEGAALGVPVVVLR 300 (376)
T ss_dssp HHHTT--CTTEEEEC-CCCHHHHHHHHHTEEEEEESC-----HH---HHHHHHHTTCCEEECS
T ss_pred HHhcc--CCCEEEEC-CCCHHHHHHHHHhCcEEEECC-----cC---HHHHHHHcCCCEEecc
Confidence 66532 34899996 777889999999999999652 22 2779999999999874
No 22
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=99.84 E-value=1.5e-19 Score=194.42 Aligned_cols=248 Identities=15% Similarity=0.051 Sum_probs=166.2
Q ss_pred CCCcEEEEeCCCCchHHHHHHHHHh-hcCCeEEEEEcCcchhhhhhcc-CCCcHHH----------------HHHHHHHH
Q 015058 100 ASPDVFLVQNPPSVPTLVAVKWASS-LRRSAFIVDWHNFGYTLLSLSL-GRRSHFV----------------SIYRWIEK 161 (414)
Q Consensus 100 ~~~Dvvh~~~pp~~~~~~~~~la~~-~~~~~~Iv~~H~~~~~l~~~~~-~~~~~~~----------------~i~~~~Ek 161 (414)
.+|||+|+|.+ .++.++.+++. ..++|.|+|.|+..+.-. +.. +...+.. .-...+||
T Consensus 180 ~~pdIiH~HDW---~tg~~~~~Lk~~~~~i~tVfTiH~telGR~-lagqg~~~~y~~L~~~~~d~ea~~~~i~~~~~~EK 255 (725)
T 3nb0_A 180 QHAIVAHFHEW---LAGVALPLCRKRRIDVVTIFTTHATLLGRY-LCASGSFDFYNCLESVDVDHEAGRFGIYHRYCIER 255 (725)
T ss_dssp SEEEEEEEESG---GGCTHHHHHHHTTCSCEEEEEESSCHHHHH-HTSSSCSCHHHHGGGCCHHHHHHHTTCHHHHHHHH
T ss_pred CCCcEEEeCch---hhhHHHHHHHHhCCCCCEEEEEecchhhhh-hhhcCCCchhhhhhhcCCChhhhhhchhHHHHHHH
Confidence 46999999998 66666656553 458999999999832110 000 1000000 01235688
Q ss_pred HHhccCCEEEEeCHHHHHHHHHhhCCc-EEEecCC-CCCCcCCCChH--HHHHHHHHhhhhccCCCCccccccCCCCCCC
Q 015058 162 YYGKMANGCLCVTQAMQHELAQNWGIK-ATVLYDQ-PPEFFHPTSLE--EKHELFCRLNKILHQPLGVQDCVSNGMEGQK 237 (414)
Q Consensus 162 ~~~k~ad~ii~vS~~~~~~l~~~~gi~-i~vI~n~-~~~~f~p~~~~--~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 237 (414)
.....||.|+|||+.+++++...++.+ -.+|+|| |.+.|.|.... .+.+.++++..-.
T Consensus 256 aga~~AD~ITTVS~~yA~Ei~~Ll~r~~d~iIpNGID~~~f~p~~~~~~~k~~aK~klq~~l------------------ 317 (725)
T 3nb0_A 256 AAAHSADVFTTVSQITAFEAEHLLKRKPDGILPNGLNVIKFQAFHEFQNLHALKKEKINDFV------------------ 317 (725)
T ss_dssp HHHHHSSEEEESSHHHHHHHHHHTSSCCSEECCCCBCCCCCSSTTHHHHHHHHHHHHHHHHH------------------
T ss_pred HHHHhCCEEEECCHHHHHHHHHHhcCCCCEEEcCCccccccCcchhhHHHHHHHHHHHHHHH------------------
Confidence 888999999999999999998876665 3449999 99999886321 1223333331100
Q ss_pred CccceeeeccccccccCCCCCeEEEEeccCC-CCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCc
Q 015058 238 ADETIFTSLAGIDVFLKPNRPALVVSSTSWT-PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPR 316 (414)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~~~~~i~~vgrl~-~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 316 (414)
+..| .+-+++++++..+++.+||++ ++||++.+++|+..+.++... ..+ ..+-
T Consensus 318 --~~~~----~~~l~l~~dk~liifivgRle~~nKGiDl~ieAl~~L~~~l~~--~~~------------------~~~v 371 (725)
T 3nb0_A 318 --RGHF----HGCFDFDLDNTLYFFIAGRYEYKNKGADMFIEALARLNYRLKV--SGS------------------KKTV 371 (725)
T ss_dssp --HHHT----TTCCCSCGGGEEEEEEESSCCTTTTTHHHHHHHHHHHHHHHHH--TTC------------------CCEE
T ss_pred --Hhhc----ccCCCCCCCceeEEEEEEEeccccCCHHHHHHHHHHHHHHHhh--ccC------------------CCcE
Confidence 0000 112345444545777799999 789999999999998764100 000 0122
Q ss_pred EEEEEEcCC-----------------------------------------------------------------------
Q 015058 317 LLFIITGKG----------------------------------------------------------------------- 325 (414)
Q Consensus 317 i~liI~G~G----------------------------------------------------------------------- 325 (414)
+.|+|+..|
T Consensus 372 vafii~p~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~ 451 (725)
T 3nb0_A 372 VAFIVMPAKNNSFTVEALKGQAEVRALENTVHEVTTSIGKRIFDHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILA 451 (725)
T ss_dssp EEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHH
T ss_pred EEEEEeCCCCCCCchhhhcchhHHHHHHHHHHHHHHHHhHHHHHHHhcccccccCCCCCCCHHHhcChHHHHHHHHHHHh
Confidence 444444433
Q ss_pred ------------------CChHHHHHHHHHcCCC-c------EEEecCCCChh------hHHHHHhhccEEEeeccCCCC
Q 015058 326 ------------------PDKESYEEKIRRLRLK-R------VAFRTMWLSAE------DYPLLLGSADLGVCLHTSSSG 374 (414)
Q Consensus 326 ------------------~~~e~l~~~i~~l~l~-~------V~f~g~~v~~e------d~~~~l~~aDl~V~~~~s~~g 374 (414)
...+.+...++++++. + |.|.+.|++.+ |++.+|++||+||+|+ ..
T Consensus 452 ~~~~~~~lpp~~TH~~~~~~~D~Il~~~r~l~L~N~~~drVKVIf~P~~L~~~d~lf~~d~~~~~~~advfV~PS---~~ 528 (725)
T 3nb0_A 452 LRRPEGQLPPIVTHNMVDDANDLILNKIRQVQLFNSPSDRVKMIFHPEFLNANNPILGLDYDEFVRGCHLGVFPS---YY 528 (725)
T ss_dssp HCCCTTCCCCSBSEEETTGGGCHHHHHHHHHTCCCCTTCSEEEEECCSCCCTTCSSSCCCHHHHHHHCSEEECCC---SS
T ss_pred hccCCCCCCCeeeeecccCCccHHHHHHHhcCCCCCcCCceeEEEeccccCCCCccchhHHHHHHhhceEEEecc---cc
Confidence 1234566677888875 4 78998899887 5999999999999874 35
Q ss_pred CCCchhHHHHHHcCCeEEEeeeCC
Q 015058 375 LDLPMKVCYCWYSRYSLKLLWTCS 398 (414)
Q Consensus 375 ~~lP~kl~Eama~G~Pvi~s~~~~ 398 (414)
|++|..++||||||+|||+|+++|
T Consensus 529 EgfGl~~LEAmA~G~PvI~s~~gG 552 (725)
T 3nb0_A 529 EPWGYTPAECTVMGVPSITTNVSG 552 (725)
T ss_dssp BSSCHHHHHHHHTTCCEEEETTBH
T ss_pred CCCCHHHHHHHHcCCCEEEeCCCC
Confidence 789999999999999999999987
No 23
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=99.83 E-value=9.6e-20 Score=182.72 Aligned_cols=192 Identities=15% Similarity=0.046 Sum_probs=135.1
Q ss_pred CCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEeCHHHHH
Q 015058 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH 179 (414)
Q Consensus 100 ~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS~~~~~ 179 (414)
.+||+||++.+..++. ++ ....+ |+++..+.+. ..+ +++++++.+|.++++|+.+++
T Consensus 110 ~~pDiv~~~~~~~~~~-~~----~~~~~-p~~~~~~~~~---------~~~--------~~~~~~~~~d~ii~~S~~~~~ 166 (374)
T 2xci_A 110 SKPKALIVVEREFWPS-LI----IFTKV-PKILVNAYAK---------GSL--------IEKILSKKFDLIIMRTQEDVE 166 (374)
T ss_dssp HCCSEEEEESCCCCHH-HH----HHCCS-CEEEEEECCC---------CCH--------HHHHHHTTCSEEEESCHHHHH
T ss_pred hCCCEEEEECccCcHH-HH----HHHhC-CEEEEEeecC---------chH--------HHHHHHHhCCEEEECCHHHHH
Confidence 6899999875433332 11 22233 7765433321 111 345667899999999999999
Q ss_pred HHHHhhCCc-EEEecCCCCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccccCCCCC
Q 015058 180 ELAQNWGIK-ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRP 258 (414)
Q Consensus 180 ~l~~~~gi~-i~vI~n~~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 258 (414)
.+.+. |++ +.+++|+ .|.+.... + + .+. ++
T Consensus 167 ~l~~~-g~~ki~vi~n~---~f~~~~~~-----~-~-------------------------------------~l~--~~ 197 (374)
T 2xci_A 167 KFKTF-GAKRVFSCGNL---KFICQKGK-----G-I-------------------------------------KLK--GE 197 (374)
T ss_dssp HHHTT-TCCSEEECCCG---GGCCCCCS-----C-C-------------------------------------CCS--SC
T ss_pred HHHHc-CCCeEEEcCCC---ccCCCcCh-----h-h-------------------------------------hhc--CC
Confidence 99875 775 8889887 23221100 0 0 011 23
Q ss_pred eEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCCh-HHHHHHHHH
Q 015058 259 ALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK-ESYEEKIRR 337 (414)
Q Consensus 259 ~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~-e~l~~~i~~ 337 (414)
+++++|++ .||++.|++|++.+++ .+|+++|+|+|+||++ +++++++++
T Consensus 198 -vi~~~~~~--~k~~~~ll~A~~~l~~---------------------------~~p~~~lvivG~g~~~~~~l~~~~~~ 247 (374)
T 2xci_A 198 -FIVAGSIH--TGEVEIILKAFKEIKK---------------------------TYSSLKLILVPRHIENAKIFEKKARD 247 (374)
T ss_dssp -EEEEEEEC--GGGHHHHHHHHHHHHT---------------------------TCTTCEEEEEESSGGGHHHHHHHHHH
T ss_pred -EEEEEeCC--CchHHHHHHHHHHHHh---------------------------hCCCcEEEEECCCHHHHHHHHHHHHH
Confidence 56666653 5899999999999875 4789999999999987 689999999
Q ss_pred cCCC---------cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEe-eeCC
Q 015058 338 LRLK---------RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLL-WTCS 398 (414)
Q Consensus 338 l~l~---------~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s-~~~~ 398 (414)
+|++ +|.|.| +.+|++.+|++||++++++ +..++++..++||||||+|||++ ++++
T Consensus 248 ~gl~~~~~~~~~~~v~~~~---~~~dl~~~y~~aDv~vl~s--s~~e~gg~~~lEAmA~G~PVI~~~~~~~ 313 (374)
T 2xci_A 248 FGFKTSFFENLEGDVILVD---RFGILKELYPVGKIAIVGG--TFVNIGGHNLLEPTCWGIPVIYGPYTHK 313 (374)
T ss_dssp TTCCEEETTCCCSSEEECC---SSSCHHHHGGGEEEEEECS--SSSSSCCCCCHHHHTTTCCEEECSCCTT
T ss_pred CCCceEEecCCCCcEEEEC---CHHHHHHHHHhCCEEEECC--cccCCCCcCHHHHHHhCCCEEECCCccC
Confidence 9986 477776 5799999999999988652 22234578899999999999985 4444
No 24
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=99.83 E-value=1.2e-19 Score=181.37 Aligned_cols=196 Identities=11% Similarity=0.005 Sum_probs=134.9
Q ss_pred hcCCCcEEEEeCCCCchHHHHHHHHHhh--cCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEeCH
Q 015058 98 KIASPDVFLVQNPPSVPTLVAVKWASSL--RRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQ 175 (414)
Q Consensus 98 k~~~~Dvvh~~~pp~~~~~~~~~la~~~--~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS~ 175 (414)
+..++|+|++++||.....+.+.+++++ +++|+|+.+||+. ++. +.... ...+.|+++++.||.|+|+|+
T Consensus 71 ~~~~~DvIi~q~P~~~~~~~~~~~~~~lk~~~~k~i~~ihDl~-pl~---~~~~~----~~~~~E~~~y~~aD~Ii~~S~ 142 (339)
T 3rhz_A 71 GLRHGDVVIFQTPTWNTTEFDEKLMNKLKLYDIKIVLFIHDVV-PLM---FSGNF----YLMDRTIAYYNKADVVVAPSQ 142 (339)
T ss_dssp TCCTTCEEEEEECCSSCHHHHHHHHHHHTTSSCEEEEEESCCH-HHH---CGGGG----GGHHHHHHHHTTCSEEEESCH
T ss_pred cCCCCCEEEEeCCCcchhhHHHHHHHHHHhcCCEEEEEecccH-Hhh---Cccch----hhHHHHHHHHHHCCEEEECCH
Confidence 4579999999999643333334444443 3899999999984 332 21111 223479999999999999999
Q ss_pred HHHHHHHHhhCCc---EEEecCCCCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccc
Q 015058 176 AMQHELAQNWGIK---ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVF 252 (414)
Q Consensus 176 ~~~~~l~~~~gi~---i~vI~n~~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (414)
.+++.+.++ |++ +.++++++.. .+.+. .
T Consensus 143 ~~~~~l~~~-G~~~~ki~~~~~~~~~--~~~~~----------------------------------------------~ 173 (339)
T 3rhz_A 143 KMIDKLRDF-GMNVSKTVVQGMWDHP--TQAPM----------------------------------------------F 173 (339)
T ss_dssp HHHHHHHHT-TCCCSEEEECCSCCCC--CCCCC----------------------------------------------C
T ss_pred HHHHHHHHc-CCCcCceeecCCCCcc--Ccccc----------------------------------------------c
Confidence 999999875 876 4444444321 01100 0
Q ss_pred cCCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHHH
Q 015058 253 LKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYE 332 (414)
Q Consensus 253 l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l~ 332 (414)
.+.++ ..|+|+|++.+.+. +.+ ..++++|+|+|+|+++
T Consensus 174 ~~~~~-~~i~yaG~l~k~~~----------L~~---------------------------l~~~~~f~ivG~G~~~---- 211 (339)
T 3rhz_A 174 PAGLK-REIHFPGNPERFSF----------VKE---------------------------WKYDIPLKVYTWQNVE---- 211 (339)
T ss_dssp CCEEE-EEEEECSCTTTCGG----------GGG---------------------------CCCSSCEEEEESCCCC----
T ss_pred ccCCC-cEEEEeCCcchhhH----------HHh---------------------------CCCCCeEEEEeCCccc----
Confidence 01122 48999999985221 111 1257999999999985
Q ss_pred HHHHHcCCCcEEEecCCCChhhHHHHHhhccEEEeeccCCC----CCCCchhHHHHHHcCCeEEEeeeCCc
Q 015058 333 EKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS----GLDLPMKVCYCWYSRYSLKLLWTCSV 399 (414)
Q Consensus 333 ~~i~~l~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~----g~~lP~kl~Eama~G~Pvi~s~~~~~ 399 (414)
+ +.||+|+| ++|.++++.+|+++|++++...... ....|+|++||||||+|||+++.++.
T Consensus 212 ----~--l~nV~f~G-~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~~~~~ 275 (339)
T 3rhz_A 212 ----L--PQNVHKIN-YRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQEGIAN 275 (339)
T ss_dssp ----C--CTTEEEEE-CCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEETTCTT
T ss_pred ----C--cCCEEEeC-CCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEccChhH
Confidence 2 34999997 9999999999999999886411100 13479999999999999999886653
No 25
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=99.82 E-value=6.7e-19 Score=183.58 Aligned_cols=224 Identities=9% Similarity=-0.008 Sum_probs=145.3
Q ss_pred CCCcEEEEeCCCCchHHHHHHHHHhh-cCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEeCHHHH
Q 015058 100 ASPDVFLVQNPPSVPTLVAVKWASSL-RRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178 (414)
Q Consensus 100 ~~~Dvvh~~~pp~~~~~~~~~la~~~-~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS~~~~ 178 (414)
..+|+||+|++ ....++.+++.. .++|+++.+|....+. .. +..-.+...+.+ .+ -.+|.+...+....
T Consensus 122 ~~~DiV~vHdy---hl~~l~~~lr~~~~~~~i~~~~H~pfp~~-~~-~~~lp~~~~il~----~l-l~~d~i~f~~~~~~ 191 (482)
T 1uqt_A 122 QDDDIIWIHDY---HLLPFAHELRKRGVNNRIGFFLHIPFPTP-EI-FNALPTYDTLLE----QL-CDYDLLGFQTENDR 191 (482)
T ss_dssp CTTCEEEEESG---GGTTHHHHHHHTTCCSCEEEECCSCCCCH-HH-HTTSTTHHHHHH----HH-TTSSEEEESSHHHH
T ss_pred CCCCEEEEECc---hHHHHHHHHHHhCCCCcEEEEEcCCCCCH-HH-HhhCccHHHHHH----hh-hccCeEEEECHHHH
Confidence 56799999986 334445555544 4799999999742111 00 100111111111 11 25677777776655
Q ss_pred HHHHH-----------------hhCC--cEEEecCC-CCCCcCCCCh----HHHHHHHHHhhhhccCCCCccccccCCCC
Q 015058 179 HELAQ-----------------NWGI--KATVLYDQ-PPEFFHPTSL----EEKHELFCRLNKILHQPLGVQDCVSNGME 234 (414)
Q Consensus 179 ~~l~~-----------------~~gi--~i~vI~n~-~~~~f~p~~~----~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 234 (414)
+.+.. .+|. ++.++||| |++.|.+... .++.+++++++
T Consensus 192 ~~f~~~~~~~l~~~~~~~~~~~~~g~~~~v~vip~GID~~~f~~~~~~~~~~~~~~lr~~~~------------------ 253 (482)
T 1uqt_A 192 LAFLDCLSNLTRVTTRSAKSHTAWGKAFRTEVYPIGIEPKEIAKQAAGPLPPKLAQLKAELK------------------ 253 (482)
T ss_dssp HHHHHHHHHHSCEEEETTTEEEETTEEEEEEECCCCCCHHHHHHHHHSCCCHHHHHHHHHTT------------------
T ss_pred HHHHHHHHHHhCCccccCCeEEECCeEEEEEEEeccCCHHHHHHHhcCcchHHHHHHHHHhC------------------
Confidence 54332 1232 27899999 7777754210 01344554431
Q ss_pred CCCCccceeeeccccccccCCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCC
Q 015058 235 GQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLY 314 (414)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (414)
++ .+|+++||+.+.||++.+|+|++.+.++.+ + ..
T Consensus 254 ---------------------~~-~vil~VgRl~~~Kgi~~ll~A~~~ll~~~p-------------------~----~~ 288 (482)
T 1uqt_A 254 ---------------------NV-QNIFSVERLDYSKGLPERFLAYEALLEKYP-------------------Q----HH 288 (482)
T ss_dssp ---------------------TC-EEEEEECCBCGGGCHHHHHHHHHHHHHHCG-------------------G----GT
T ss_pred ---------------------CC-EEEEEEeCCcccCCHHHHHHHHHHHHHhCc-------------------c----cc
Confidence 34 489999999999999999999999876411 0 01
Q ss_pred CcEEEEEEcC-----CCCh----HHHHHHHHHcC-------CCcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCc
Q 015058 315 PRLLFIITGK-----GPDK----ESYEEKIRRLR-------LKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLP 378 (414)
Q Consensus 315 p~i~liI~G~-----G~~~----e~l~~~i~~l~-------l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP 378 (414)
.++.|+++|. |++. +++++++++++ ...|.|+++.++++|++.+|++||+||+++ ..+|||
T Consensus 289 ~~v~Lv~vG~p~~~~~~~~~~l~~~l~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~pS---~~EGfg 365 (482)
T 1uqt_A 289 GKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTP---LRDGMN 365 (482)
T ss_dssp TTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECC---SSBSCC
T ss_pred CcEEEEEEECCCccchHHHHHHHHHHHHHHHHHhhhcccCCCceEEEeCCCCCHHHHHHHHHHccEEEECC---CcccCC
Confidence 2488999984 4433 34444554432 235887766999999999999999999763 357899
Q ss_pred hhHHHHHHcCC-----eEEEeeeCCc
Q 015058 379 MKVCYCWYSRY-----SLKLLWTCSV 399 (414)
Q Consensus 379 ~kl~Eama~G~-----Pvi~s~~~~~ 399 (414)
.+++||||||+ |+|+|+.+|.
T Consensus 366 Lv~lEAmA~g~~~~~gpvV~S~~~G~ 391 (482)
T 1uqt_A 366 LVAKEYVAAQDPANPGVLVLSQFAGA 391 (482)
T ss_dssp HHHHHHHHHSCTTSCCEEEEETTBGG
T ss_pred chHHHHHHhCCCCCCCCEEEECCCCC
Confidence 99999999998 9999997764
No 26
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=99.82 E-value=1e-19 Score=163.54 Aligned_cols=106 Identities=16% Similarity=0.063 Sum_probs=96.2
Q ss_pred EEEEeccCC-CCCChHHHHHHHHHhH--HHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCC--ChHHHHHH
Q 015058 260 LVVSSTSWT-PDEDFGILLEAALMYD--RRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP--DKESYEEK 334 (414)
Q Consensus 260 ~i~~vgrl~-~~Kg~~~LleA~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~--~~e~l~~~ 334 (414)
+|+++|++. +.||++.+++|++.+. + ..|+++|+|+|+|+ ..+++++.
T Consensus 38 ~i~~~G~~~~~~K~~~~li~a~~~l~~~~---------------------------~~~~~~l~i~G~~~~~~~~~l~~~ 90 (200)
T 2bfw_A 38 TFMFIGRFDRGQKGVDVLLKAIEILSSKK---------------------------EFQEMRFIIIGKGDPELEGWARSL 90 (200)
T ss_dssp EEEEESCBCSSSSCHHHHHHHHHHHTTSG---------------------------GGGGEEEEEECCBCHHHHHHHHHH
T ss_pred EEEEeeccccccCCHHHHHHHHHHHHhhc---------------------------cCCCeEEEEECCCChHHHHHHHHH
Confidence 889999999 9999999999999985 4 25789999999999 88999999
Q ss_pred HHHcCCCcEEE-ecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCC
Q 015058 335 IRRLRLKRVAF-RTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCS 398 (414)
Q Consensus 335 i~~l~l~~V~f-~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~ 398 (414)
+++++ +|+| .| +++.++++.+|++||++|+++. .+++|++++|||+||+|||+++++|
T Consensus 91 ~~~~~--~v~~~~g-~~~~~~~~~~~~~ad~~l~ps~---~e~~~~~~~Ea~a~G~PvI~~~~~~ 149 (200)
T 2bfw_A 91 EEKHG--NVKVITE-MLSREFVRELYGSVDFVIIPSY---FEPFGLVALEAMCLGAIPIASAVGG 149 (200)
T ss_dssp HHHCT--TEEEECS-CCCHHHHHHHHTTCSEEEECCS---CCSSCHHHHHHHHTTCEEEEESCHH
T ss_pred HHhcC--CEEEEec-cCCHHHHHHHHHHCCEEEECCC---CCCccHHHHHHHHCCCCEEEeCCCC
Confidence 99988 8999 97 9999999999999999998643 4689999999999999999998863
No 27
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=99.80 E-value=3e-19 Score=156.21 Aligned_cols=104 Identities=13% Similarity=0.218 Sum_probs=94.9
Q ss_pred CeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHHHHHHHH
Q 015058 258 PALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRR 337 (414)
Q Consensus 258 ~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l~~~i~~ 337 (414)
|++|+++||+.++||++.+++|+..+++ .|+++|+|+|+|++++++++++++
T Consensus 2 ~~~i~~~G~~~~~Kg~~~li~a~~~l~~----------------------------~~~~~l~i~G~g~~~~~~~~~~~~ 53 (166)
T 3qhp_A 2 PFKIAMVGRYSNEKNQSVLIKAVALSKY----------------------------KQDIVLLLKGKGPDEKKIKLLAQK 53 (166)
T ss_dssp CEEEEEESCCSTTTTHHHHHHHHHTCTT----------------------------GGGEEEEEECCSTTHHHHHHHHHH
T ss_pred ceEEEEEeccchhcCHHHHHHHHHHhcc----------------------------CCCeEEEEEeCCccHHHHHHHHHH
Confidence 4689999999999999999999999853 478999999999999999999999
Q ss_pred cCCCcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCC-eEEEee
Q 015058 338 LRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRY-SLKLLW 395 (414)
Q Consensus 338 l~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~-Pvi~s~ 395 (414)
+++ +|.| | ++++++++.+|++||++|+|+. .+++|++++|||+||+ |||+++
T Consensus 54 ~~~-~v~~-g-~~~~~~~~~~~~~adv~v~ps~---~e~~~~~~~Eama~G~vPvi~~~ 106 (166)
T 3qhp_A 54 LGV-KAEF-G-FVNSNELLEILKTCTLYVHAAN---VESEAIACLEAISVGIVPVIANS 106 (166)
T ss_dssp HTC-EEEC-C-CCCHHHHHHHHTTCSEEEECCC---SCCCCHHHHHHHHTTCCEEEECC
T ss_pred cCC-eEEE-e-ecCHHHHHHHHHhCCEEEECCc---ccCccHHHHHHHhcCCCcEEeeC
Confidence 999 8999 7 9999999999999999998643 5789999999999998 999954
No 28
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=99.74 E-value=3.6e-18 Score=152.60 Aligned_cols=112 Identities=15% Similarity=0.037 Sum_probs=99.7
Q ss_pred cccCCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHH
Q 015058 251 VFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKES 330 (414)
Q Consensus 251 ~~l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~ 330 (414)
..++++++ +|+|+|++.+.||++.+++|++.+ |+++|+|+|+|+..++
T Consensus 17 ~~~~~~~~-~i~~~G~~~~~Kg~~~li~a~~~l-------------------------------~~~~l~i~G~~~~~~~ 64 (177)
T 2f9f_A 17 FKFKCYGD-FWLSVNRIYPEKRIELQLEVFKKL-------------------------------QDEKLYIVGWFSKGDH 64 (177)
T ss_dssp CCCCCCCS-CEEEECCSSGGGTHHHHHHHHHHC-------------------------------TTSCEEEEBCCCTTST
T ss_pred cccCCCCC-EEEEEeccccccCHHHHHHHHHhC-------------------------------CCcEEEEEecCccHHH
Confidence 35666775 899999999999999999999875 3689999999999999
Q ss_pred HHHHHH--HcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCC
Q 015058 331 YEEKIR--RLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCS 398 (414)
Q Consensus 331 l~~~i~--~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~ 398 (414)
+++.++ ++++. +|.|.| +++.++++.+|++||++|+++. .+++|.+++|||+||+|||++++++
T Consensus 65 l~~~~~~~~~~l~~~v~~~g-~~~~~e~~~~~~~adi~v~ps~---~e~~~~~~~Eama~G~PvI~~~~~~ 131 (177)
T 2f9f_A 65 AERYARKIMKIAPDNVKFLG-SVSEEELIDLYSRCKGLLCTAK---DEDFGLTPIEAMASGKPVIAVNEGG 131 (177)
T ss_dssp HHHHHHHHHHHSCTTEEEEE-SCCHHHHHHHHHHCSEEEECCS---SCCSCHHHHHHHHTTCCEEEESSHH
T ss_pred HHHHHHhhhcccCCcEEEeC-CCCHHHHHHHHHhCCEEEeCCC---cCCCChHHHHHHHcCCcEEEeCCCC
Confidence 999999 88898 999997 9999999999999999997633 5678999999999999999998764
No 29
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.70 E-value=2.7e-16 Score=159.05 Aligned_cols=291 Identities=13% Similarity=0.059 Sum_probs=167.2
Q ss_pred CCEEEEEEeCCCCCChHHHHHHHHHHhhCCCcEEEEecCCCCC-CcccccCCCeE-EEEeecCCCCCCCCCCchHHHHHH
Q 015058 4 RGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKP-HAAILEHPSIH-IHTMTQWPTIPRGLPKVLKPVLLL 81 (414)
Q Consensus 4 ~~~~~v~~~~d~~~~~r~~~~a~~La~~~g~eV~vv~~~~~~~-~~~~~~~~~i~-i~~v~~~~~~~~~~~~~~~~~~~l 81 (414)
++++++++.+ -.....+...+..|.++.++++.++..++... .....+.-+++ -+.+. .... .. ......
T Consensus 25 m~ki~~v~Gt-r~~~~~~a~li~~l~~~~~~~~~~~~tG~h~~~~~~~~~~~~i~~~~~l~--~~~~--~~---~~~~~~ 96 (396)
T 3dzc_A 25 MKKVLIVFGT-RPEAIKMAPLVQQLCQDNRFVAKVCVTGQHREMLDQVLELFSITPDFDLN--IMEP--GQ---TLNGVT 96 (396)
T ss_dssp CEEEEEEECS-HHHHHHHHHHHHHHHHCTTEEEEEEECCSSSHHHHHHHHHTTCCCSEECC--CCCT--TC---CHHHHH
T ss_pred CCeEEEEEec-cHhHHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhcCCCCceeee--cCCC--CC---CHHHHH
Confidence 4445554433 33334455566777764478887776654321 11122223331 12333 1000 11 111122
Q ss_pred HHHHHHHHHHHHHHhhhcCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCC-cHHHHHHHHHH
Q 015058 82 LKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRR-SHFVSIYRWIE 160 (414)
Q Consensus 82 ~k~l~~~~~l~~~l~~k~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~-~~~~~i~~~~E 160 (414)
.+.+.++..+ + +..+||+||++..+ ...+.+.++++..++|++...++.. + +... .+...+.+
T Consensus 97 ~~~~~~l~~~----l-~~~kPDvVi~~g~~--~~~~~~~~aa~~~~IPv~h~~ag~r-s-----~~~~~~~~~~~~r--- 160 (396)
T 3dzc_A 97 SKILLGMQQV----L-SSEQPDVVLVHGDT--ATTFAASLAAYYQQIPVGHVEAGLR-T-----GNIYSPWPEEGNR--- 160 (396)
T ss_dssp HHHHHHHHHH----H-HHHCCSEEEEETTS--HHHHHHHHHHHTTTCCEEEETCCCC-C-----SCTTSSTTHHHHH---
T ss_pred HHHHHHHHHH----H-HhcCCCEEEEECCc--hhHHHHHHHHHHhCCCEEEEECCcc-c-----cccccCCcHHHHH---
Confidence 3333332222 2 23799999999862 3335556777888999764333221 0 1111 11122222
Q ss_pred HHHhccCCEEEEeCHHHHHHHHHhhCCc---EEEecCC--CCCCcCCCCh----HHHHHHHHHhhhhccCCCCccccccC
Q 015058 161 KYYGKMANGCLCVTQAMQHELAQNWGIK---ATVLYDQ--PPEFFHPTSL----EEKHELFCRLNKILHQPLGVQDCVSN 231 (414)
Q Consensus 161 k~~~k~ad~ii~vS~~~~~~l~~~~gi~---i~vI~n~--~~~~f~p~~~----~~~~~l~~~l~~~~~~~~~~~~~~~~ 231 (414)
+.+.+.+|.++|.|+..++.+.+. |++ +.++.|. |...+.+... ..+.++++++
T Consensus 161 ~~~~~~a~~~~~~se~~~~~l~~~-G~~~~ki~vvGn~~~d~~~~~~~~~~~~~~~~~~~r~~l---------------- 223 (396)
T 3dzc_A 161 KLTAALTQYHFAPTDTSRANLLQE-NYNAENIFVTGNTVIDALLAVREKIHTDMDLQATLESQF---------------- 223 (396)
T ss_dssp HHHHHTCSEEEESSHHHHHHHHHT-TCCGGGEEECCCHHHHHHHHHHHHHHHCHHHHHHHHHTC----------------
T ss_pred HHHHHhcCEEECCCHHHHHHHHHc-CCCcCcEEEECCcHHHHHHHhhhhcccchhhHHHHHHHh----------------
Confidence 234688999999999999999875 876 7888775 3211111100 0023444332
Q ss_pred CCCCCCCccceeeeccccccc-cCCCCCeEEEEeccCC-CCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCC
Q 015058 232 GMEGQKADETIFTSLAGIDVF-LKPNRPALVVSSTSWT-PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDG 309 (414)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~i~~vgrl~-~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (414)
+ ++++++.++++.+|.. ..|+++.+++|++.+.++
T Consensus 224 --------------------g~l~~~~~~vlv~~hR~~~~~~~~~~ll~A~~~l~~~----------------------- 260 (396)
T 3dzc_A 224 --------------------PMLDASKKLILVTGHRRESFGGGFERICQALITTAEQ----------------------- 260 (396)
T ss_dssp --------------------TTCCTTSEEEEEECSCBCCCTTHHHHHHHHHHHHHHH-----------------------
T ss_pred --------------------CccCCCCCEEEEEECCcccchhHHHHHHHHHHHHHHh-----------------------
Confidence 3 2345555666776643 347899999999998763
Q ss_pred ccCCCCcEEEEEE-cCCCChHHHHHHHHH-cCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHH
Q 015058 310 KQYLYPRLLFIIT-GKGPDKESYEEKIRR-LRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWY 386 (414)
Q Consensus 310 ~~~~~p~i~liI~-G~G~~~e~l~~~i~~-l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama 386 (414)
+|++++++. |.+|. +++.+++ ++.. +|.|.+ ++..+|+..+|++||++|+.+ | + ...|||+
T Consensus 261 ----~~~~~~v~~~g~~~~---~~~~l~~~~~~~~~v~~~~-~lg~~~~~~l~~~ad~vv~~S----G-g---~~~EA~a 324 (396)
T 3dzc_A 261 ----HPECQILYPVHLNPN---VREPVNKLLKGVSNIVLIE-PQQYLPFVYLMDRAHIILTDS----G-G---IQEEAPS 324 (396)
T ss_dssp ----CTTEEEEEECCBCHH---HHHHHHHHTTTCTTEEEEC-CCCHHHHHHHHHHCSEEEESC----S-G---GGTTGGG
T ss_pred ----CCCceEEEEeCCChH---HHHHHHHHHcCCCCEEEeC-CCCHHHHHHHHHhcCEEEECC----c-c---HHHHHHH
Confidence 688999885 66642 3334444 2444 899986 778889999999999998542 3 2 2389999
Q ss_pred cCCeEEEe
Q 015058 387 SRYSLKLL 394 (414)
Q Consensus 387 ~G~Pvi~s 394 (414)
+|+|+|++
T Consensus 325 ~G~PvV~~ 332 (396)
T 3dzc_A 325 LGKPVLVM 332 (396)
T ss_dssp GTCCEEEC
T ss_pred cCCCEEEc
Confidence 99999997
No 30
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=99.69 E-value=5.6e-16 Score=162.18 Aligned_cols=217 Identities=11% Similarity=-0.026 Sum_probs=144.0
Q ss_pred CCcEEEEeCCCCchHHHHHHHHHhh-cCCeEEEEEcCcchhhhhhccCCCcH-HHHHHHHHHHHHhccCCEEEEeCHHHH
Q 015058 101 SPDVFLVQNPPSVPTLVAVKWASSL-RRSAFIVDWHNFGYTLLSLSLGRRSH-FVSIYRWIEKYYGKMANGCLCVTQAMQ 178 (414)
Q Consensus 101 ~~Dvvh~~~pp~~~~~~~~~la~~~-~~~~~Iv~~H~~~~~l~~~~~~~~~~-~~~i~~~~Ek~~~k~ad~ii~vS~~~~ 178 (414)
.-|+|.+|++ +.+++..+++.. .+.++..-+|-..++.. + +..-.. ++ ..+-+.+ -.+|.|...++...
T Consensus 149 ~~D~VwVhDY---hL~llp~~lR~~~~~~~igfFlHiPfPs~e-~-f~~Lp~~~r---~ell~gl-l~~DligF~t~~y~ 219 (496)
T 3t5t_A 149 ADPVYLVHDY---QLVGVPALLREQRPDAPILLFVHIPWPSAD-Y-WRILPKEIR---TGILHGM-LPATTIGFFADRWC 219 (496)
T ss_dssp SSCEEEEESG---GGTTHHHHHHHHCTTSCEEEECCSCCCCHH-H-HTTSCHHHH---HHHHHHH-TTSSEEEESSHHHH
T ss_pred CCCEEEEeCc---cHhHHHHHHHhhCCCCeEEEEEcCCCCCHH-H-HhhCcHhHH---HHHHHHH-HhCCEEEEecHHHH
Confidence 4689999997 444455555543 46777777776421111 0 111111 11 1222233 47999999999887
Q ss_pred HHHHH----hh-C--------------C--cEEEecCC-CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCC
Q 015058 179 HELAQ----NW-G--------------I--KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQ 236 (414)
Q Consensus 179 ~~l~~----~~-g--------------i--~i~vI~n~-~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 236 (414)
+.+.+ .. | . ++.++|+| |++.|.+...+.+.+++++++
T Consensus 220 ~~Fl~~~~r~l~g~~~~~~~~~v~~~gr~v~v~viP~GID~~~f~~~~~~~~~~lr~~~~-------------------- 279 (496)
T 3t5t_A 220 RNFLESVADLLPDARIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGRNPQLPEGIEEWAD-------------------- 279 (496)
T ss_dssp HHHHHHHHHHCTTCEEETTTTEEEETTEEEEEEECCCCBCGGGC----CCCCTTHHHHHT--------------------
T ss_pred HHHHHHHHHHhcCCcccccCCeEEECCEEEEEEEeccEeCHHHhchhhHHHHHHHHHHhC--------------------
Confidence 76332 12 2 1 26789999 888897764222234554432
Q ss_pred CCccceeeeccccccccCCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCC-
Q 015058 237 KADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYP- 315 (414)
Q Consensus 237 ~~~~~~~~~~~~~~~~l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p- 315 (414)
++ .+|+++||+.+.||++.+|+|+ .+.++ +|
T Consensus 280 -------------------~~-~lIl~VgRLd~~KGi~~lL~Af-~ll~~---------------------------~P~ 311 (496)
T 3t5t_A 280 -------------------GH-RLVVHSGRTDPIKNAERAVRAF-VLAAR---------------------------GGG 311 (496)
T ss_dssp -------------------TS-EEEEEEEESSGGGCHHHHHHHH-HHHHH---------------------------TSS
T ss_pred -------------------Cc-eEEEEcccCccccCHHHHHHHH-HHHHh---------------------------Ccc
Confidence 34 3899999999999999999999 76653 44
Q ss_pred --cEEEEEEc-----CCCChHHHHHHHH----HcCC----CcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchh
Q 015058 316 --RLLFIITG-----KGPDKESYEEKIR----RLRL----KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMK 380 (414)
Q Consensus 316 --~i~liI~G-----~G~~~e~l~~~i~----~l~l----~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~k 380 (414)
++.|+++| +|++.+++++.++ +.+. ..|.|+| .++.++++.+|++||+||+++ ..+||+..
T Consensus 312 ~~~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~g~~~V~f~g-~v~~~el~aly~~ADv~vv~S---lrEGfgLv 387 (496)
T 3t5t_A 312 LEKTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGSDTVRIDN-DNDVNHTIACFRRADLLIFNS---TVDGQNLS 387 (496)
T ss_dssp CTTEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHHCTTSEEEEE-CCCHHHHHHHHHHCSEEEECC---SSBSCCSH
T ss_pred cceEEEEEEECCCCCCchHHHHHHHHHHHHHHHhccccCCcCEEEeC-CCCHHHHHHHHHhccEEEECc---ccccCChh
Confidence 46788775 5555545554444 4332 2699997 889999999999999999753 35788999
Q ss_pred HHHHHHcC---CeEEEeeeCC
Q 015058 381 VCYCWYSR---YSLKLLWTCS 398 (414)
Q Consensus 381 l~Eama~G---~Pvi~s~~~~ 398 (414)
.+|||||| .|+|+|...|
T Consensus 388 ~~EamA~~~~~g~lVlSe~aG 408 (496)
T 3t5t_A 388 TFEAPLVNERDADVILSETCG 408 (496)
T ss_dssp HHHHHHHCSSCCEEEEETTBT
T ss_pred HHHHHHhCCCCCCEEEeCCCC
Confidence 99999997 8999999887
No 31
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.65 E-value=4e-15 Score=147.66 Aligned_cols=270 Identities=11% Similarity=-0.045 Sum_probs=152.4
Q ss_pred HHHHHHHHHHhhCCCcEEEEecCCCCCCcccccCCCeEEEEeecC--C---------CCCCCCC--CchHHHHHHHHHHH
Q 015058 20 RMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQW--P---------TIPRGLP--KVLKPVLLLLKPLI 86 (414)
Q Consensus 20 r~~~~a~~La~~~g~eV~vv~~~~~~~~~~~~~~~~i~i~~v~~~--~---------~~~~~~~--~~~~~~~~l~k~l~ 86 (414)
++...+..|.++ ||+|+++|... ........+++++.++.. . ......+ .....+..+...+.
T Consensus 36 ~~~~la~~L~~~-GheV~v~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (412)
T 3otg_A 36 PLLPLATAARAA-GHEVTFATGEG---FAGTLRKLGFEPVATGMPVFDGFLAALRIRFDTDSPEGLTPEQLSELPQIVFG 111 (412)
T ss_dssp GGHHHHHHHHHT-TCEEEEEECGG---GHHHHHHTTCEEEECCCCHHHHHHHHHHHHHSCSCCTTCCHHHHTTSHHHHHH
T ss_pred HHHHHHHHHHHC-CCEEEEEccHH---HHHHHHhcCCceeecCcccccchhhhhhhhhcccCCccCChhHhhHHHHHHHh
Confidence 344677888886 99999999653 233344578899888720 0 0000000 00000000111111
Q ss_pred H-----HHHHHHHHhhhcCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHH
Q 015058 87 Q-----FFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEK 161 (414)
Q Consensus 87 ~-----~~~l~~~l~~k~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek 161 (414)
. ....+..++ +..+||+||++.. . +.+.++++..|+|+|++.|+... ......++.+++.+
T Consensus 112 ~~~~~~~~~~l~~~l-~~~~pDvVv~~~~---~--~~~~~aa~~~giP~v~~~~~~~~--------~~~~~~~~~~~~~~ 177 (412)
T 3otg_A 112 RVIPQRVFDELQPVI-ERLRPDLVVQEIS---N--YGAGLAALKAGIPTICHGVGRDT--------PDDLTRSIEEEVRG 177 (412)
T ss_dssp THHHHHHHHHHHHHH-HHHCCSEEEEETT---C--HHHHHHHHHHTCCEEEECCSCCC--------CSHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHH-HhcCCCEEEECch---h--hHHHHHHHHcCCCEEEecccccC--------chhhhHHHHHHHHH
Confidence 1 011112222 2369999988853 1 22456677789999998887632 11122333344444
Q ss_pred HHh------------ccCCEEEEeCHHHHHHHHHhhCCc-EEEecCCCCCCcCCCChHHHHHHHHHhhhhccCCCCcccc
Q 015058 162 YYG------------KMANGCLCVTQAMQHELAQNWGIK-ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDC 228 (414)
Q Consensus 162 ~~~------------k~ad~ii~vS~~~~~~l~~~~gi~-i~vI~n~~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~ 228 (414)
+.. ..+|.+++.++...+...+.+... ..+. +.+..... + +.++.
T Consensus 178 ~~~~~g~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~--~-~~~~~------------ 235 (412)
T 3otg_A 178 LAQRLGLDLPPGRIDGFGNPFIDIFPPSLQEPEFRARPRRHELR-------PVPFAEQG--D-LPAWL------------ 235 (412)
T ss_dssp HHHHTTCCCCSSCCGGGGCCEEECSCGGGSCHHHHTCTTEEECC-------CCCCCCCC--C-CCGGG------------
T ss_pred HHHHcCCCCCcccccCCCCeEEeeCCHHhcCCcccCCCCcceee-------ccCCCCCC--C-CCCcc------------
Confidence 433 357888888877666555543322 1111 11111000 0 00000
Q ss_pred ccCCCCCCCCccceeeeccccccccCCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcC
Q 015058 229 VSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISD 308 (414)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (414)
....++++.++++.|++. .++.+.+.++++.+.+
T Consensus 236 ----------------------~~~~~~~~~vlv~~G~~~-~~~~~~~~~~~~~l~~----------------------- 269 (412)
T 3otg_A 236 ----------------------SSRDTARPLVYLTLGTSS-GGTVEVLRAAIDGLAG----------------------- 269 (412)
T ss_dssp ----------------------GGSCTTSCEEEEECTTTT-CSCHHHHHHHHHHHHT-----------------------
T ss_pred ----------------------ccccCCCCEEEEEcCCCC-cCcHHHHHHHHHHHHc-----------------------
Confidence 011345667889999997 7788888888877753
Q ss_pred CccCCCCcEEEEEEc-CCCChHHHHHHHHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHH
Q 015058 309 GKQYLYPRLLFIITG-KGPDKESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWY 386 (414)
Q Consensus 309 ~~~~~~p~i~liI~G-~G~~~e~l~~~i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama 386 (414)
. +.++++++ +++.+++++ ++. +|.|.| ++ +++.+|+.||++|+. + -++.++|||+
T Consensus 270 -----~-~~~~~~~~g~~~~~~~l~------~~~~~v~~~~-~~---~~~~~l~~ad~~v~~----~---g~~t~~Ea~a 326 (412)
T 3otg_A 270 -----L-DADVLVASGPSLDVSGLG------EVPANVRLES-WV---PQAALLPHVDLVVHH----G---GSGTTLGALG 326 (412)
T ss_dssp -----S-SSEEEEECCSSCCCTTCC------CCCTTEEEES-CC---CHHHHGGGCSEEEES----C---CHHHHHHHHH
T ss_pred -----C-CCEEEEEECCCCChhhhc------cCCCcEEEeC-CC---CHHHHHhcCcEEEEC----C---chHHHHHHHH
Confidence 2 35665554 444355443 244 899997 76 599999999999953 1 2578999999
Q ss_pred cCCeEEEeeeCC
Q 015058 387 SRYSLKLLWTCS 398 (414)
Q Consensus 387 ~G~Pvi~s~~~~ 398 (414)
+|+|+|+....+
T Consensus 327 ~G~P~v~~p~~~ 338 (412)
T 3otg_A 327 AGVPQLSFPWAG 338 (412)
T ss_dssp HTCCEEECCCST
T ss_pred hCCCEEecCCch
Confidence 999999976654
No 32
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.64 E-value=3.8e-15 Score=151.24 Aligned_cols=205 Identities=16% Similarity=0.067 Sum_probs=132.9
Q ss_pred cCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCC-cHHHHHHHHHHHHHhccCCEEEEeCHHH
Q 015058 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRR-SHFVSIYRWIEKYYGKMANGCLCVTQAM 177 (414)
Q Consensus 99 ~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~-~~~~~i~~~~Ek~~~k~ad~ii~vS~~~ 177 (414)
..+||+||++..+ ...+.+.++++..++|++....+.. ++... .+... ...+++.+.+|.+++.|+..
T Consensus 112 ~~kPD~Vi~~gd~--~~~l~~~laA~~~~IPv~h~~aglr------s~~~~~~~p~~---~~r~~~~~~a~~~~~~se~~ 180 (403)
T 3ot5_A 112 AENPDIVLVHGDT--TTSFAAGLATFYQQKMLGHVEAGLR------TWNKYSPFPEE---MNRQLTGVMADIHFSPTKQA 180 (403)
T ss_dssp HHCCSEEEEETTC--HHHHHHHHHHHHTTCEEEEESCCCC------CSCTTSSTTHH---HHHHHHHHHCSEEEESSHHH
T ss_pred HcCCCEEEEECCc--hhHHHHHHHHHHhCCCEEEEECCcc------ccccccCCcHH---HHHHHHHHhcCEEECCCHHH
Confidence 3799999999762 2334455677788999754322220 11111 11111 22345667899999999999
Q ss_pred HHHHHHhhCCc---EEEecCC--CCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccc
Q 015058 178 QHELAQNWGIK---ATVLYDQ--PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVF 252 (414)
Q Consensus 178 ~~~l~~~~gi~---i~vI~n~--~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (414)
++.+.+. |++ +.++.|. |...+.+... .+.+.+++
T Consensus 181 ~~~l~~~-Gi~~~~i~vvGn~~~D~~~~~~~~~-~~~~~~~~-------------------------------------- 220 (403)
T 3ot5_A 181 KENLLAE-GKDPATIFVTGNTAIDALKTTVQKD-YHHPILEN-------------------------------------- 220 (403)
T ss_dssp HHHHHHT-TCCGGGEEECCCHHHHHHHHHSCTT-CCCHHHHS--------------------------------------
T ss_pred HHHHHHc-CCCcccEEEeCCchHHHHHhhhhhh-cchHHHHh--------------------------------------
Confidence 9999875 886 7777765 3222212110 01122211
Q ss_pred cCCCCCeEEEEeccCCC-CCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEE-cCCCChHH
Q 015058 253 LKPNRPALVVSSTSWTP-DEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIIT-GKGPDKES 330 (414)
Q Consensus 253 l~~~~~~~i~~vgrl~~-~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~-G~G~~~e~ 330 (414)
+ ++++.++++.+|... .|+++.+++|+..+.++ +|++++++. |.++ .
T Consensus 221 l-~~~~~vlv~~~r~~~~~~~l~~ll~a~~~l~~~---------------------------~~~~~~v~~~~~~~---~ 269 (403)
T 3ot5_A 221 L-GDNRLILMTAHRRENLGEPMQGMFEAVREIVES---------------------------REDTELVYPMHLNP---A 269 (403)
T ss_dssp C-TTCEEEEECCCCHHHHTTHHHHHHHHHHHHHHH---------------------------CTTEEEEEECCSCH---H
T ss_pred c-cCCCEEEEEeCcccccCcHHHHHHHHHHHHHHh---------------------------CCCceEEEecCCCH---H
Confidence 2 244557777877643 46789999999998763 688999886 5554 2
Q ss_pred HHHHHHH-cCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEe
Q 015058 331 YEEKIRR-LRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLL 394 (414)
Q Consensus 331 l~~~i~~-l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s 394 (414)
+++.+++ ++.. +|.+.+ ++..+|+..+|++||++|+. | | ....||+++|+|+|++
T Consensus 270 ~~~~l~~~~~~~~~v~l~~-~l~~~~~~~l~~~ad~vv~~---S-G----g~~~EA~a~g~PvV~~ 326 (403)
T 3ot5_A 270 VREKAMAILGGHERIHLIE-PLDAIDFHNFLRKSYLVFTD---S-G----GVQEEAPGMGVPVLVL 326 (403)
T ss_dssp HHHHHHHHHTTCTTEEEEC-CCCHHHHHHHHHHEEEEEEC---C-H----HHHHHGGGTTCCEEEC
T ss_pred HHHHHHHHhCCCCCEEEeC-CCCHHHHHHHHHhcCEEEEC---C-c----cHHHHHHHhCCCEEEe
Confidence 3344444 3443 899997 88888999999999998853 2 2 2337999999999998
No 33
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.63 E-value=2.8e-14 Score=142.52 Aligned_cols=263 Identities=15% Similarity=0.067 Sum_probs=151.5
Q ss_pred ChHHHH----HHHHHHhhCCCcEEEEecCCCCCCcccccCCCeEEEEeecCCCCCCCCCCchHHHHHHHHHHHHHHHHHH
Q 015058 18 SPRMQY----QALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLW 93 (414)
Q Consensus 18 ~~r~~~----~a~~La~~~g~eV~vv~~~~~~~~~~~~~~~~i~i~~v~~~~~~~~~~~~~~~~~~~l~k~l~~~~~l~~ 93 (414)
.+|.-+ .|+.|.++ ||+|.++|.... ...+.....+++++.++ ....++.. ....+..+++.+..+... +
T Consensus 12 TgGHi~palala~~L~~~-g~~V~~vg~~~g-~e~~~v~~~g~~~~~i~--~~~~~~~~-~~~~~~~~~~~~~~~~~~-~ 85 (365)
T 3s2u_A 12 TGGHVFPALACAREFQAR-GYAVHWLGTPRG-IENDLVPKAGLPLHLIQ--VSGLRGKG-LKSLVKAPLELLKSLFQA-L 85 (365)
T ss_dssp SHHHHHHHHHHHHHHHHT-TCEEEEEECSSS-THHHHTGGGTCCEEECC-----------------CHHHHHHHHHHH-H
T ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEECCch-HhhchhhhcCCcEEEEE--CCCcCCCC-HHHHHHHHHHHHHHHHHH-H
Confidence 355544 55666665 999999985532 12334445678888877 22211110 111122222222222111 2
Q ss_pred HHhhhcCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEe
Q 015058 94 FLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCV 173 (414)
Q Consensus 94 ~l~~k~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~v 173 (414)
+++ +..+||+|+.... ...+.+.+++++.|+|++++..|... | . ..+++.+.||.+.+.
T Consensus 86 ~~l-~~~~PDvVi~~g~---~~s~p~~laA~~~~iP~vihe~n~~~-------G---~-------~nr~l~~~a~~v~~~ 144 (365)
T 3s2u_A 86 RVI-RQLRPVCVLGLGG---YVTGPGGLAARLNGVPLVIHEQNAVA-------G---T-------ANRSLAPIARRVCEA 144 (365)
T ss_dssp HHH-HHHCCSEEEECSS---STHHHHHHHHHHTTCCEEEEECSSSC-------C---H-------HHHHHGGGCSEEEES
T ss_pred HHH-HhcCCCEEEEcCC---cchHHHHHHHHHcCCCEEEEecchhh-------h---h-------HHHhhccccceeeec
Confidence 222 3479999998865 22334556678889999975555321 1 1 124667889988776
Q ss_pred CHHHHHHHHHhhCCcEEEecCCC-CCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccc
Q 015058 174 TQAMQHELAQNWGIKATVLYDQP-PEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVF 252 (414)
Q Consensus 174 S~~~~~~l~~~~gi~i~vI~n~~-~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (414)
.+... ....+..++.|.. .+.+.+.. ...+
T Consensus 145 ~~~~~-----~~~~k~~~~g~pvr~~~~~~~~--------------------------------------------~~~~ 175 (365)
T 3s2u_A 145 FPDTF-----PASDKRLTTGNPVRGELFLDAH--------------------------------------------ARAP 175 (365)
T ss_dssp STTSS-----CC---CEECCCCCCGGGCCCTT--------------------------------------------SSCC
T ss_pred ccccc-----cCcCcEEEECCCCchhhccchh--------------------------------------------hhcc
Confidence 55321 0111234444442 12221110 0113
Q ss_pred cCCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEE-EEcCCCChHHH
Q 015058 253 LKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFI-ITGKGPDKESY 331 (414)
Q Consensus 253 l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~li-I~G~G~~~e~l 331 (414)
++++++.++++.|+....+..+.+++|++.+.. ..++.++ ++|++ +.+..
T Consensus 176 ~~~~~~~ilv~gGs~g~~~~~~~~~~al~~l~~----------------------------~~~~~vi~~~G~~-~~~~~ 226 (365)
T 3s2u_A 176 LTGRRVNLLVLGGSLGAEPLNKLLPEALAQVPL----------------------------EIRPAIRHQAGRQ-HAEIT 226 (365)
T ss_dssp CTTSCCEEEECCTTTTCSHHHHHHHHHHHTSCT----------------------------TTCCEEEEECCTT-THHHH
T ss_pred cCCCCcEEEEECCcCCccccchhhHHHHHhccc----------------------------ccceEEEEecCcc-ccccc
Confidence 455667788888999988888888888887653 1234444 45655 45667
Q ss_pred HHHHHHcCCCcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeee
Q 015058 332 EEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWT 396 (414)
Q Consensus 332 ~~~i~~l~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~ 396 (414)
.+..++++. ++.+.+ ..+|++.+|++||++|+- +| ++.+.|+|++|+|+|....
T Consensus 227 ~~~~~~~~~-~~~v~~---f~~dm~~~l~~aDlvI~r----aG---~~Tv~E~~a~G~P~Ilip~ 280 (365)
T 3s2u_A 227 AERYRTVAV-EADVAP---FISDMAAAYAWADLVICR----AG---ALTVSELTAAGLPAFLVPL 280 (365)
T ss_dssp HHHHHHTTC-CCEEES---CCSCHHHHHHHCSEEEEC----CC---HHHHHHHHHHTCCEEECC-
T ss_pred cceeccccc-cccccc---chhhhhhhhccceEEEec----CC---cchHHHHHHhCCCeEEecc
Confidence 777777766 466677 458999999999999952 23 6789999999999997544
No 34
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=99.55 E-value=2.8e-13 Score=135.72 Aligned_cols=97 Identities=15% Similarity=0.135 Sum_probs=67.2
Q ss_pred CCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEE-EEEcCCCChHHHHHH
Q 015058 256 NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLF-IITGKGPDKESYEEK 334 (414)
Q Consensus 256 ~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~l-iI~G~G~~~e~l~~~ 334 (414)
+++.++++.|++. .++.+.+.++++.+.+ .+++++ +++|+|++.+.++
T Consensus 231 ~~~~v~v~~Gs~~-~~~~~~~~~~~~~l~~----------------------------~~~~~~~~~~G~~~~~~~l~-- 279 (430)
T 2iyf_A 231 AEKVVLVSLGSAF-TKQPAFYRECVRAFGN----------------------------LPGWHLVLQIGRKVTPAELG-- 279 (430)
T ss_dssp CSEEEEEECTTTC-C-CHHHHHHHHHHHTT----------------------------CTTEEEEEECC---CGGGGC--
T ss_pred CCCeEEEEcCCCC-CCcHHHHHHHHHHHhc----------------------------CCCeEEEEEeCCCCChHHhc--
Confidence 4456888999998 5565665555554431 246777 5789998766542
Q ss_pred HHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCC
Q 015058 335 IRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCS 398 (414)
Q Consensus 335 i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~ 398 (414)
.+. +|.+.| |++.. .+|+.||++|+. +| .++++|||++|+|+|+....+
T Consensus 280 ----~~~~~v~~~~-~~~~~---~~l~~ad~~v~~----~G---~~t~~Ea~~~G~P~i~~p~~~ 329 (430)
T 2iyf_A 280 ----ELPDNVEVHD-WVPQL---AILRQADLFVTH----AG---AGGSQEGLATATPMIAVPQAV 329 (430)
T ss_dssp ----SCCTTEEEES-SCCHH---HHHTTCSEEEEC----CC---HHHHHHHHHTTCCEEECCCSH
T ss_pred ----cCCCCeEEEe-cCCHH---HHhhccCEEEEC----CC---ccHHHHHHHhCCCEEECCCcc
Confidence 244 899997 88765 689999999852 12 468999999999999987644
No 35
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=99.47 E-value=3.3e-12 Score=125.71 Aligned_cols=95 Identities=18% Similarity=0.182 Sum_probs=63.8
Q ss_pred CCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEE-EEcCCCChHHHHH
Q 015058 255 PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFI-ITGKGPDKESYEE 333 (414)
Q Consensus 255 ~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~li-I~G~G~~~e~l~~ 333 (414)
++++.++++.|+....+ -+.+.++++.+.+ .+ ++++ ++|+|++.+.+++
T Consensus 229 ~~~~~v~v~~G~~~~~~-~~~~~~~~~~~~~----------------------------~~-~~~~~~~g~~~~~~~~~~ 278 (402)
T 3ia7_A 229 PDAPVLLVSLGNQFNEH-PEFFRACAQAFAD----------------------------TP-WHVVMAIGGFLDPAVLGP 278 (402)
T ss_dssp TTCCEEEEECCSCSSCC-HHHHHHHHHHHTT----------------------------SS-CEEEEECCTTSCGGGGCS
T ss_pred CCCCEEEEECCCCCcch-HHHHHHHHHHHhc----------------------------CC-cEEEEEeCCcCChhhhCC
Confidence 45667888999997664 2333333333321 23 5554 5888877654432
Q ss_pred HHHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeee
Q 015058 334 KIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWT 396 (414)
Q Consensus 334 ~i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~ 396 (414)
+. +|.+.| |++.. .+|+.||++|+. +| .+.++|||++|+|+|+...
T Consensus 279 ------~~~~v~~~~-~~~~~---~ll~~ad~~v~~----~G---~~t~~Ea~~~G~P~v~~p~ 325 (402)
T 3ia7_A 279 ------LPPNVEAHQ-WIPFH---SVLAHARACLTH----GT---TGAVLEAFAAGVPLVLVPH 325 (402)
T ss_dssp ------CCTTEEEES-CCCHH---HHHTTEEEEEEC----CC---HHHHHHHHHTTCCEEECGG
T ss_pred ------CCCcEEEec-CCCHH---HHHhhCCEEEEC----CC---HHHHHHHHHhCCCEEEeCC
Confidence 34 899997 77665 899999999953 22 3578999999999997644
No 36
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=99.44 E-value=3.3e-13 Score=133.38 Aligned_cols=97 Identities=11% Similarity=0.041 Sum_probs=71.7
Q ss_pred CCCCeEEEEeccCCCCCCh-HHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHHHH
Q 015058 255 PNRPALVVSSTSWTPDEDF-GILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEE 333 (414)
Q Consensus 255 ~~~~~~i~~vgrl~~~Kg~-~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l~~ 333 (414)
++++.++++.|++...++. ..+++++... + ..|+++++++|+|+..+.++
T Consensus 216 ~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~---------------------------~~p~~~~v~~~~~~~~~~l~- 266 (391)
T 3tsa_A 216 TSARRVCICMGRMVLNATGPAPLLRAVAAA-T---------------------------ELPGVEAVIAVPPEHRALLT- 266 (391)
T ss_dssp CSSEEEEEECCHHHHHHHCSHHHHHHHHHH-H---------------------------TSTTEEEEEECCGGGGGGCT-
T ss_pred CCCCEEEEEcCCCCCcccchHHHHHHHHHh-c---------------------------cCCCeEEEEEECCcchhhcc-
Confidence 4556688889999775555 6777776655 4 36789999999887655443
Q ss_pred HHHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeee
Q 015058 334 KIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWT 396 (414)
Q Consensus 334 ~i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~ 396 (414)
++. +|.+.| |++.. .++++||++|+. +-++.++|||++|+|+|+...
T Consensus 267 -----~~~~~v~~~~-~~~~~---~ll~~ad~~v~~-------~G~~t~~Ea~~~G~P~v~~p~ 314 (391)
T 3tsa_A 267 -----DLPDNARIAE-SVPLN---LFLRTCELVICA-------GGSGTAFTATRLGIPQLVLPQ 314 (391)
T ss_dssp -----TCCTTEEECC-SCCGG---GTGGGCSEEEEC-------CCHHHHHHHHHTTCCEEECCC
T ss_pred -----cCCCCEEEec-cCCHH---HHHhhCCEEEeC-------CCHHHHHHHHHhCCCEEecCC
Confidence 344 899997 87654 466999999942 224578999999999999644
No 37
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=99.44 E-value=9.6e-13 Score=130.95 Aligned_cols=94 Identities=15% Similarity=0.077 Sum_probs=70.0
Q ss_pred CCCCeEEEEeccCCCC-CChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHHHH
Q 015058 255 PNRPALVVSSTSWTPD-EDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEE 333 (414)
Q Consensus 255 ~~~~~~i~~vgrl~~~-Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l~~ 333 (414)
++++.++++.|++... ++.+.+.++++.+.+ . +++++++|+|++.+.++
T Consensus 230 ~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~----------------------------~-~~~~v~~~g~~~~~~l~- 279 (398)
T 3oti_A 230 PARPEVAITMGTIELQAFGIGAVEPIIAAAGE----------------------------V-DADFVLALGDLDISPLG- 279 (398)
T ss_dssp CSSCEEEECCTTTHHHHHCGGGHHHHHHHHHT----------------------------S-SSEEEEECTTSCCGGGC-
T ss_pred CCCCEEEEEcCCCccccCcHHHHHHHHHHHHc----------------------------C-CCEEEEEECCcChhhhc-
Confidence 4566788999999765 466666666665542 2 57899998887755443
Q ss_pred HHHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEe
Q 015058 334 KIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLL 394 (414)
Q Consensus 334 ~i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s 394 (414)
++. +|.+.| |+ ++..+|+.||++|+. +-++.++|||++|+|+|+.
T Consensus 280 -----~~~~~v~~~~-~~---~~~~ll~~ad~~v~~-------~G~~t~~Eal~~G~P~v~~ 325 (398)
T 3oti_A 280 -----TLPRNVRAVG-WT---PLHTLLRTCTAVVHH-------GGGGTVMTAIDAGIPQLLA 325 (398)
T ss_dssp -----SCCTTEEEES-SC---CHHHHHTTCSEEEEC-------CCHHHHHHHHHHTCCEEEC
T ss_pred -----cCCCcEEEEc-cC---CHHHHHhhCCEEEEC-------CCHHHHHHHHHhCCCEEEc
Confidence 344 899997 76 577889999999952 2256899999999999994
No 38
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=99.44 E-value=6e-13 Score=132.20 Aligned_cols=93 Identities=10% Similarity=0.020 Sum_probs=56.5
Q ss_pred CCCeEEEEeccCCCCC----------ChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCC
Q 015058 256 NRPALVVSSTSWTPDE----------DFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKG 325 (414)
Q Consensus 256 ~~~~~i~~vgrl~~~K----------g~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G 325 (414)
+++.++++.|++...+ .+..+++|+..+ +++++++|+|
T Consensus 226 ~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~--------------------------------~~~~v~~~~~ 273 (398)
T 4fzr_A 226 KQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKL--------------------------------GFEVVVAVSD 273 (398)
T ss_dssp SSCEEECC----------------CCSHHHHHHHGGGG--------------------------------TCEEEECCCC
T ss_pred CCCEEEEEccCcccccccccccchHHHHHHHHHHHHhC--------------------------------CCEEEEEeCC
Confidence 5566888999997655 344444444321 4788998888
Q ss_pred CChHHHHHHHHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeC
Q 015058 326 PDKESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTC 397 (414)
Q Consensus 326 ~~~e~l~~~i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~ 397 (414)
+..+.+++ +. +|.+.| |+ ++..+|+.||++|+. +-++.++|||++|+|+|+....
T Consensus 274 ~~~~~l~~------~~~~v~~~~-~~---~~~~ll~~ad~~v~~-------gG~~t~~Ea~~~G~P~v~~p~~ 329 (398)
T 4fzr_A 274 KLAQTLQP------LPEGVLAAG-QF---PLSAIMPACDVVVHH-------GGHGTTLTCLSEGVPQVSVPVI 329 (398)
T ss_dssp --------------CCTTEEEES-CC---CHHHHGGGCSEEEEC-------CCHHHHHHHHHTTCCEEECCCS
T ss_pred cchhhhcc------CCCcEEEeC-cC---CHHHHHhhCCEEEec-------CCHHHHHHHHHhCCCEEecCCc
Confidence 76555442 34 899997 76 478899999999942 1266899999999999996443
No 39
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=99.39 E-value=3.2e-11 Score=120.03 Aligned_cols=125 Identities=14% Similarity=0.052 Sum_probs=69.2
Q ss_pred CCEEEEEEeCCCCCChHHHHHHHHHHhhCCCcEEEEecCCCCCCcccccCCCeEEEEeecCCCCCCC-----CCCchHHH
Q 015058 4 RGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRG-----LPKVLKPV 78 (414)
Q Consensus 4 ~~~~~v~~~~d~~~~~r~~~~a~~La~~~g~eV~vv~~~~~~~~~~~~~~~~i~i~~v~~~~~~~~~-----~~~~~~~~ 78 (414)
|.++.++..+..|.-.++...+..|.++ ||+|+++|... ..+..+..+++++.++........ .......+
T Consensus 20 m~rIl~~~~~~~GHv~p~l~La~~L~~~-Gh~V~v~~~~~---~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (415)
T 3rsc_A 20 MAHLLIVNVASHGLILPTLTVVTELVRR-GHRVSYVTAGG---FAEPVRAAGATVVPYQSEIIDADAAEVFGSDDLGVRP 95 (415)
T ss_dssp CCEEEEECCSCHHHHGGGHHHHHHHHHT-TCEEEEEECGG---GHHHHHHTTCEEEECCCSTTTCCHHHHHHSSSSCHHH
T ss_pred CCEEEEEeCCCccccccHHHHHHHHHHC-CCEEEEEeCHH---HHHHHHhcCCEEEeccccccccccchhhccccHHHHH
Confidence 4456666555444555677788999996 99999999443 233344568888888731110000 00001111
Q ss_pred HH-HHHHHHHHHHHHHHHhhhcCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCc
Q 015058 79 LL-LLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNF 137 (414)
Q Consensus 79 ~~-l~k~l~~~~~l~~~l~~k~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~ 137 (414)
.. ..+.....+..+...+ +..+||+|++.++ .. ..+.++++..|+|++...|++
T Consensus 96 ~~~~~~~~~~~~~~l~~~l-~~~~PDlVi~d~~---~~-~~~~~aA~~~giP~v~~~~~~ 150 (415)
T 3rsc_A 96 HLMYLRENVSVLRATAEAL-DGDVPDLVLYDDF---PF-IAGQLLAARWRRPAVRLSAAF 150 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHH-SSSCCSEEEEEST---TH-HHHHHHHHHTTCCEEEEESSC
T ss_pred HHHHHHHHHHHHHHHHHHH-hccCCCEEEECch---hh-hHHHHHHHHhCCCEEEEEecc
Confidence 11 1122222222222222 3479999998744 22 234556677899999887765
No 40
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=99.28 E-value=4e-11 Score=121.24 Aligned_cols=206 Identities=16% Similarity=0.140 Sum_probs=130.2
Q ss_pred cCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEeCHHHH
Q 015058 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178 (414)
Q Consensus 99 ~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~vS~~~~ 178 (414)
..+||+|+++..+ ...++ .++++..++|++....+. . ++ +...... ...+++.+.+|.+++.|+..+
T Consensus 92 ~~kPD~Vlv~gd~--~~~~a-alaA~~~~IPv~h~eagl-r-----s~-~~~~pee---~nR~~~~~~a~~~~~~te~~~ 158 (385)
T 4hwg_A 92 KEKPDAVLFYGDT--NSCLS-AIAAKRRKIPIFHMEAGN-R-----CF-DQRVPEE---INRKIIDHISDVNITLTEHAR 158 (385)
T ss_dssp HHCCSEEEEESCS--GGGGG-HHHHHHTTCCEEEESCCC-C-----CS-CTTSTHH---HHHHHHHHHCSEEEESSHHHH
T ss_pred hcCCcEEEEECCc--hHHHH-HHHHHHhCCCEEEEeCCC-c-----cc-cccCcHH---HHHHHHHhhhceeecCCHHHH
Confidence 3799999999763 12223 556677899965433332 1 11 1111111 122455678999999999999
Q ss_pred HHHHHhhCCc---EEEecCCCCCCcCCC-ChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccccC
Q 015058 179 HELAQNWGIK---ATVLYDQPPEFFHPT-SLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLK 254 (414)
Q Consensus 179 ~~l~~~~gi~---i~vI~n~~~~~f~p~-~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 254 (414)
+.+.+. |++ +.++.|.-.+.+... +..++.++++++ +++
T Consensus 159 ~~l~~~-G~~~~~I~vtGnp~~D~~~~~~~~~~~~~~~~~l------------------------------------gl~ 201 (385)
T 4hwg_A 159 RYLIAE-GLPAELTFKSGSHMPEVLDRFMPKILKSDILDKL------------------------------------SLT 201 (385)
T ss_dssp HHHHHT-TCCGGGEEECCCSHHHHHHHHHHHHHHCCHHHHT------------------------------------TCC
T ss_pred HHHHHc-CCCcCcEEEECCchHHHHHHhhhhcchhHHHHHc------------------------------------CCC
Confidence 999875 875 777766511111110 011222334333 444
Q ss_pred CCCCeEEEEeccC---CCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHH
Q 015058 255 PNRPALVVSSTSW---TPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESY 331 (414)
Q Consensus 255 ~~~~~~i~~vgrl---~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l 331 (414)
+ ++.++++.+|. ...|+++.+++|+..+.++ + ++.+++.. +| +.
T Consensus 202 ~-~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~---------------------------~-~~~vv~p~-~p---~~ 248 (385)
T 4hwg_A 202 P-KQYFLISSHREENVDVKNNLKELLNSLQMLIKE---------------------------Y-NFLIIFST-HP---RT 248 (385)
T ss_dssp T-TSEEEEEECCC-----CHHHHHHHHHHHHHHHH---------------------------H-CCEEEEEE-CH---HH
T ss_pred c-CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhc---------------------------C-CeEEEEEC-Ch---HH
Confidence 4 44677788774 3447789999999988653 3 56766643 33 36
Q ss_pred HHHHHHc-C-C---CcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeee
Q 015058 332 EEKIRRL-R-L---KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWT 396 (414)
Q Consensus 332 ~~~i~~l-~-l---~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~ 396 (414)
++.+++. + + .+|.+.+ .+...|+..+|+.||++|+. | | ....||+++|+|+|....
T Consensus 249 ~~~l~~~~~~~~~~~~v~l~~-~lg~~~~~~l~~~adlvvt~---S-G----gv~~EA~alG~Pvv~~~~ 309 (385)
T 4hwg_A 249 KKRLEDLEGFKELGDKIRFLP-AFSFTDYVKLQMNAFCILSD---S-G----TITEEASILNLPALNIRE 309 (385)
T ss_dssp HHHHHTSGGGGGTGGGEEECC-CCCHHHHHHHHHHCSEEEEC---C-T----THHHHHHHTTCCEEECSS
T ss_pred HHHHHHHHHHhcCCCCEEEEc-CCCHHHHHHHHHhCcEEEEC---C-c----cHHHHHHHcCCCEEEcCC
Confidence 6667665 4 3 3899986 77788999999999999842 2 3 146899999999999755
No 41
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=99.23 E-value=4.7e-11 Score=117.74 Aligned_cols=93 Identities=15% Similarity=0.144 Sum_probs=65.9
Q ss_pred CCCeEEEEeccCCCC-------CChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCCh
Q 015058 256 NRPALVVSSTSWTPD-------EDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK 328 (414)
Q Consensus 256 ~~~~~i~~vgrl~~~-------Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~ 328 (414)
+++.++++.|++.+. +.+..+++|+... ++++++++.|++.
T Consensus 209 ~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~--------------------------------~~~~~~~~g~~~~ 256 (384)
T 2p6p_A 209 TRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRW--------------------------------DVELIVAAPDTVA 256 (384)
T ss_dssp SSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTT--------------------------------TCEEEEECCHHHH
T ss_pred CCCEEEEECCCCCccccccccHHHHHHHHHHHhcC--------------------------------CcEEEEEeCCCCH
Confidence 445688999999876 5677777776532 4688876655443
Q ss_pred HHHHHHHHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCC
Q 015058 329 ESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCS 398 (414)
Q Consensus 329 e~l~~~i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~ 398 (414)
++++ + +. +|.+ | |++ ...+|+.||++|+. .| ++.+.|||++|+|+|+....+
T Consensus 257 ~~l~----~--~~~~v~~-~-~~~---~~~~l~~~d~~v~~----~G---~~t~~Ea~~~G~P~v~~p~~~ 309 (384)
T 2p6p_A 257 EALR----A--EVPQARV-G-WTP---LDVVAPTCDLLVHH----AG---GVSTLTGLSAGVPQLLIPKGS 309 (384)
T ss_dssp HHHH----H--HCTTSEE-E-CCC---HHHHGGGCSEEEEC----SC---TTHHHHHHHTTCCEEECCCSH
T ss_pred HhhC----C--CCCceEE-c-CCC---HHHHHhhCCEEEeC----Cc---HHHHHHHHHhCCCEEEccCcc
Confidence 4333 2 33 8899 7 876 45689999999953 12 457999999999999986643
No 42
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=99.00 E-value=2.9e-08 Score=99.33 Aligned_cols=95 Identities=13% Similarity=0.100 Sum_probs=65.4
Q ss_pred CCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEE-EEEcCCCChHHHHHH
Q 015058 256 NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLF-IITGKGPDKESYEEK 334 (414)
Q Consensus 256 ~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~l-iI~G~G~~~e~l~~~ 334 (414)
+++.++++.|+.. .+..+.+.++++.+. .+++++ +++|+|.+.+.++
T Consensus 254 ~~~~v~v~~Gs~~-~~~~~~~~~~~~al~-----------------------------~~~~~~~~~~g~~~~~~~~~-- 301 (424)
T 2iya_A 254 GRPVLLIALGSAF-TDHLDFYRTCLSAVD-----------------------------GLDWHVVLSVGRFVDPADLG-- 301 (424)
T ss_dssp SCCEEEEECCSSS-CCCHHHHHHHHHHHT-----------------------------TCSSEEEEECCTTSCGGGGC--
T ss_pred CCCEEEEEcCCCC-cchHHHHHHHHHHHh-----------------------------cCCcEEEEEECCcCChHHhc--
Confidence 4566888999997 444444444444332 134666 5579887655432
Q ss_pred HHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeC
Q 015058 335 IRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTC 397 (414)
Q Consensus 335 i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~ 397 (414)
.+. +|.+.+ |++.. .+|+.||++|+. .| .+.++||+++|+|+|+....
T Consensus 302 ----~~~~~v~~~~-~~~~~---~~l~~~d~~v~~----~G---~~t~~Ea~~~G~P~i~~p~~ 350 (424)
T 2iya_A 302 ----EVPPNVEVHQ-WVPQL---DILTKASAFITH----AG---MGSTMEALSNAVPMVAVPQI 350 (424)
T ss_dssp ----SCCTTEEEES-SCCHH---HHHTTCSEEEEC----CC---HHHHHHHHHTTCCEEECCCS
T ss_pred ----cCCCCeEEec-CCCHH---HHHhhCCEEEEC----Cc---hhHHHHHHHcCCCEEEecCc
Confidence 244 899997 88765 689999999852 12 46899999999999997654
No 43
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=98.88 E-value=3.4e-07 Score=91.75 Aligned_cols=120 Identities=9% Similarity=0.005 Sum_probs=67.0
Q ss_pred EEEEEEeCCCCCChHHHHHHHHHHhhCCCcEEEEecCCCCCCcccccCCCeEEEEeecCCCCC-----CCCCCchHHHHH
Q 015058 6 RACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIP-----RGLPKVLKPVLL 80 (414)
Q Consensus 6 ~~~v~~~~d~~~~~r~~~~a~~La~~~g~eV~vv~~~~~~~~~~~~~~~~i~i~~v~~~~~~~-----~~~~~~~~~~~~ 80 (414)
|+.++..+..|.-.++...+..|.++ ||+|.|+|... .....+..+++++.++...... ........ .
T Consensus 2 rIli~~~gt~Ghv~p~~~La~~L~~~-Gh~V~v~~~~~---~~~~v~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~---~ 74 (404)
T 3h4t_A 2 GVLITGCGSRGDTEPLVALAARLREL-GADARMCLPPD---YVERCAEVGVPMVPVGRAVRAGAREPGELPPGAAE---V 74 (404)
T ss_dssp CEEEEEESSHHHHHHHHHHHHHHHHT-TCCEEEEECGG---GHHHHHHTTCCEEECSSCSSGGGSCTTCCCTTCGG---G
T ss_pred eEEEEeCCCCccHHHHHHHHHHHHHC-CCeEEEEeCHH---HHHHHHHcCCceeecCCCHHHHhccccCCHHHHHH---H
Confidence 34555555554445666788899886 99999998653 3333445678887776321100 00101111 1
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCc
Q 015058 81 LLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNF 137 (414)
Q Consensus 81 l~k~l~~~~~l~~~l~~k~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~ 137 (414)
+...+...+..++..+ .+||+|+++.+. +....+.+++...|+|++...|..
T Consensus 75 ~~~~~~~~~~~l~~~~---~~pD~Vi~~~~~--~~~~~a~~~A~~lgiP~v~~~~~p 126 (404)
T 3h4t_A 75 VTEVVAEWFDKVPAAI---EGCDAVVTTGLL--PAAVAVRSMAEKLGIPYRYTVLSP 126 (404)
T ss_dssp HHHHHHHHHHHHHHHH---TTCSEEEEEECH--HHHHHHHHHHHHHTCCEEEEESSG
T ss_pred HHHHHHHHHHHHHHHh---cCCCEEEECCch--hhhhhhhhHHhhcCCCEEEEEcCC
Confidence 1222222222223222 479999988651 223334566777899999877764
No 44
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=98.83 E-value=1.2e-07 Score=95.82 Aligned_cols=95 Identities=15% Similarity=0.001 Sum_probs=65.7
Q ss_pred CCCCeEEEEeccCCCC-----CChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChH
Q 015058 255 PNRPALVVSSTSWTPD-----EDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKE 329 (414)
Q Consensus 255 ~~~~~~i~~vgrl~~~-----Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e 329 (414)
++++.++++.|++... +.+..+++|+..+ ++++++.+.|++.+
T Consensus 265 ~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~--------------------------------~~~~v~~~g~~~~~ 312 (441)
T 2yjn_A 265 PERRRVCLTLGISSRENSIGQVSIEELLGAVGDV--------------------------------DAEIIATFDAQQLE 312 (441)
T ss_dssp CSSCEEEEEC----------CCSTTTTHHHHHTS--------------------------------SSEEEECCCTTTTS
T ss_pred CCCCEEEEECCCCcccccChHHHHHHHHHHHHcC--------------------------------CCEEEEEECCcchh
Confidence 4556788999999864 7888888887542 46888877666544
Q ss_pred HHHHHHHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCC
Q 015058 330 SYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCS 398 (414)
Q Consensus 330 ~l~~~i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~ 398 (414)
.++ ++. +|.+.+ |++. ..+|.+||++|+. +-.+.+.|||++|+|+|+....+
T Consensus 313 ~l~------~~~~~v~~~~-~~~~---~~ll~~ad~~V~~-------~G~~t~~Ea~~~G~P~i~~p~~~ 365 (441)
T 2yjn_A 313 GVA------NIPDNVRTVG-FVPM---HALLPTCAATVHH-------GGPGSWHTAAIHGVPQVILPDGW 365 (441)
T ss_dssp SCS------SCCSSEEECC-SCCH---HHHGGGCSEEEEC-------CCHHHHHHHHHTTCCEEECCCSH
T ss_pred hhc------cCCCCEEEec-CCCH---HHHHhhCCEEEEC-------CCHHHHHHHHHhCCCEEEeCCcc
Confidence 332 344 899997 8875 4568999999952 12568999999999999986643
No 45
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=98.76 E-value=6.9e-07 Score=89.45 Aligned_cols=91 Identities=12% Similarity=-0.008 Sum_probs=62.5
Q ss_pred CCeEEEEeccCC-CCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEE-EcCCCChHHHHHH
Q 015058 257 RPALVVSSTSWT-PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFII-TGKGPDKESYEEK 334 (414)
Q Consensus 257 ~~~~i~~vgrl~-~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI-~G~G~~~e~l~~~ 334 (414)
++.++++.|++. +.+.++.+++|++.+ +.++++ +|.+....
T Consensus 238 ~~~v~v~~Gs~~~~~~~~~~~~~al~~~--------------------------------~~~~v~~~g~~~~~~----- 280 (415)
T 1iir_A 238 PPPVYLGFGSLGAPADAVRVAIDAIRAH--------------------------------GRRVILSRGWADLVL----- 280 (415)
T ss_dssp SCCEEEECC---CCHHHHHHHHHHHHHT--------------------------------TCCEEECTTCTTCCC-----
T ss_pred CCeEEEeCCCCCCcHHHHHHHHHHHHHC--------------------------------CCeEEEEeCCCcccc-----
Confidence 355888999994 777777778877643 134555 48765421
Q ss_pred HHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCC
Q 015058 335 IRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCS 398 (414)
Q Consensus 335 i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~ 398 (414)
..+. +|.+.+ |++..+ +|.+||++|+. .| .+.+.|||++|+|+|+....+
T Consensus 281 ---~~~~~~v~~~~-~~~~~~---~l~~~d~~v~~----~G---~~t~~Ea~~~G~P~i~~p~~~ 331 (415)
T 1iir_A 281 ---PDDGADCFAIG-EVNHQV---LFGRVAAVIHH----GG---AGTTHVAARAGAPQILLPQMA 331 (415)
T ss_dssp ---SSCGGGEEECS-SCCHHH---HGGGSSEEEEC----CC---HHHHHHHHHHTCCEEECCCST
T ss_pred ---cCCCCCEEEeC-cCChHH---HHhhCCEEEeC----CC---hhHHHHHHHcCCCEEECCCCC
Confidence 2344 899997 998754 57999999952 12 368999999999999976544
No 46
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=98.61 E-value=4.7e-06 Score=89.26 Aligned_cols=111 Identities=14% Similarity=0.017 Sum_probs=80.7
Q ss_pred ccCCC-CCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEE--EEEcC--CC
Q 015058 252 FLKPN-RPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLF--IITGK--GP 326 (414)
Q Consensus 252 ~l~~~-~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~l--iI~G~--G~ 326 (414)
+++.+ ..+++++.++ ..|..+.+++++..+.++ .|+..+ .+.|+ |+
T Consensus 434 ~lp~~~G~v~Fg~fn~--~~Ki~p~~l~~WarIL~~---------------------------vP~s~L~l~~~g~~~g~ 484 (631)
T 3q3e_A 434 LLRENPEVVNIGIAST--TMKLNPYFLEALKAIRDR---------------------------AKVKVHFHFALGQSNGI 484 (631)
T ss_dssp CCCSCCSEEEEEEEEC--STTCCHHHHHHHHHHHHH---------------------------CSSEEEEEEEESSCCGG
T ss_pred cCCcCCCeEEEEECCc--cccCCHHHHHHHHHHHHh---------------------------CCCcEEEEEecCCCchh
Confidence 44442 2335555555 578899999999998875 466444 24774 44
Q ss_pred ChHHHHHHHHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeC
Q 015058 327 DKESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTC 397 (414)
Q Consensus 327 ~~e~l~~~i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~ 397 (414)
... +.+.+.++|+. +|.|.| .++.+++...|+.||+++-++ .. +-++..+|||+||+|||+..-.
T Consensus 485 ~~~-~~~~~~~~GI~~Rv~F~g-~~p~~e~la~y~~aDIfLDpf--py--~GgtTtlEALwmGVPVVTl~G~ 550 (631)
T 3q3e_A 485 THP-YVERFIKSYLGDSATAHP-HSPYHQYLRILHNCDMMVNPF--PF--GNTNGIIDMVTLGLVGVCKTGA 550 (631)
T ss_dssp GHH-HHHHHHHHHHGGGEEEEC-CCCHHHHHHHHHTCSEEECCS--SS--CCSHHHHHHHHTTCCEEEECCS
T ss_pred hHH-HHHHHHHcCCCccEEEcC-CCCHHHHHHHHhcCcEEEeCC--cc--cCChHHHHHHHcCCCEEeccCC
Confidence 444 44556788997 999997 999999999999999999442 21 2378899999999999986543
No 47
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=98.55 E-value=7.5e-06 Score=81.76 Aligned_cols=90 Identities=8% Similarity=-0.107 Sum_probs=61.5
Q ss_pred CCeEEEEeccCC---CCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEE-EcCCCChHHHH
Q 015058 257 RPALVVSSTSWT---PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFII-TGKGPDKESYE 332 (414)
Q Consensus 257 ~~~~i~~vgrl~---~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI-~G~G~~~e~l~ 332 (414)
++.++++.|++. +.+.++.+++|++.+ +.++++ +|.+... .
T Consensus 237 ~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~--------------------------------~~~~v~~~g~~~~~--~- 281 (416)
T 1rrv_A 237 SPPVHIGFGSSSGRGIADAAKVAVEAIRAQ--------------------------------GRRVILSRGWTELV--L- 281 (416)
T ss_dssp SCCEEECCTTCCSHHHHHHHHHHHHHHHHT--------------------------------TCCEEEECTTTTCC--C-
T ss_pred CCeEEEecCCCCccChHHHHHHHHHHHHHC--------------------------------CCeEEEEeCCcccc--c-
Confidence 345888899985 345556666665532 245655 4776432 1
Q ss_pred HHHHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeC
Q 015058 333 EKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTC 397 (414)
Q Consensus 333 ~~i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~ 397 (414)
..+. +|.+.+ |++. ..+|.+||++|+- .| .+.+.||+++|+|+|+.-..
T Consensus 282 -----~~~~~~v~~~~-~~~~---~~ll~~~d~~v~~----~G---~~t~~Ea~~~G~P~i~~p~~ 331 (416)
T 1rrv_A 282 -----PDDRDDCFAID-EVNF---QALFRRVAAVIHH----GS---AGTEHVATRAGVPQLVIPRN 331 (416)
T ss_dssp -----SCCCTTEEEES-SCCH---HHHGGGSSEEEEC----CC---HHHHHHHHHHTCCEEECCCS
T ss_pred -----cCCCCCEEEec-cCCh---HHHhccCCEEEec----CC---hhHHHHHHHcCCCEEEccCC
Confidence 2344 899997 8874 5578999999952 12 45899999999999996553
No 48
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=98.52 E-value=5.9e-07 Score=88.30 Aligned_cols=99 Identities=16% Similarity=0.085 Sum_probs=62.3
Q ss_pred CCCCCeEEEEeccCCCCCC-hHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHHH
Q 015058 254 KPNRPALVVSSTSWTPDED-FGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYE 332 (414)
Q Consensus 254 ~~~~~~~i~~vgrl~~~Kg-~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l~ 332 (414)
.++++.++++.|++...++ .+.+.++++.+.+ .+..+++.+.|...+..
T Consensus 234 ~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~-----------------------------~~~~~v~~~~~~~~~~~- 283 (400)
T 4amg_A 234 AAGRRRIAVTLGSIDALSGGIAKLAPLFSEVAD-----------------------------VDAEFVLTLGGGDLALL- 283 (400)
T ss_dssp CTTCCEEEECCCSCC--CCSSSTTHHHHHHGGG-----------------------------SSSEEEEECCTTCCCCC-
T ss_pred cCCCcEEEEeCCcccccCccHHHHHHHHHHhhc-----------------------------cCceEEEEecCcccccc-
Confidence 3456667888898876554 3444444444432 24677776655443221
Q ss_pred HHHHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCC
Q 015058 333 EKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCS 398 (414)
Q Consensus 333 ~~i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~ 398 (414)
..+. +|.+.+ |+| ...+|..||+||+- .| .+.+.|||++|+|+|+.-..+
T Consensus 284 -----~~~~~~v~~~~-~~p---~~~lL~~~~~~v~h----~G---~~s~~Eal~~GvP~v~~P~~~ 334 (400)
T 4amg_A 284 -----GELPANVRVVE-WIP---LGALLETCDAIIHH----GG---SGTLLTALAAGVPQCVIPHGS 334 (400)
T ss_dssp -----CCCCTTEEEEC-CCC---HHHHHTTCSEEEEC----CC---HHHHHHHHHHTCCEEECCC--
T ss_pred -----ccCCCCEEEEe-ecC---HHHHhhhhhheecc----CC---ccHHHHHHHhCCCEEEecCcc
Confidence 2344 899986 887 45678999999842 12 457999999999999854443
No 49
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=98.40 E-value=5.2e-07 Score=79.21 Aligned_cols=92 Identities=11% Similarity=0.048 Sum_probs=67.1
Q ss_pred CCCeEEEEeccCC---CCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHHH
Q 015058 256 NRPALVVSSTSWT---PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYE 332 (414)
Q Consensus 256 ~~~~~i~~vgrl~---~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l~ 332 (414)
+++.++++.|++. +.|.+..+++|++.+ +.+++++++|+..+
T Consensus 20 ~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~--------------------------------~~~~~~~~g~~~~~--- 64 (170)
T 2o6l_A 20 ENGVVVFSLGSMVSNMTEERANVIASALAQI--------------------------------PQKVLWRFDGNKPD--- 64 (170)
T ss_dssp TTCEEEEECCSCCTTCCHHHHHHHHHHHTTS--------------------------------SSEEEEECCSSCCT---
T ss_pred CCCEEEEECCCCcccCCHHHHHHHHHHHHhC--------------------------------CCeEEEEECCcCcc---
Confidence 4456899999996 566677777776432 25778877666532
Q ss_pred HHHHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeC
Q 015058 333 EKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTC 397 (414)
Q Consensus 333 ~~i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~ 397 (414)
++. +|.+.| |++.+++..+ ++||++|+. +-++.+.|||++|+|+|+....
T Consensus 65 ------~~~~~v~~~~-~~~~~~~l~~-~~ad~~I~~-------~G~~t~~Ea~~~G~P~i~~p~~ 115 (170)
T 2o6l_A 65 ------TLGLNTRLYK-WIPQNDLLGH-PKTRAFITH-------GGANGIYEAIYHGIPMVGIPLF 115 (170)
T ss_dssp ------TCCTTEEEES-SCCHHHHHTS-TTEEEEEEC-------CCHHHHHHHHHHTCCEEECCCS
T ss_pred ------cCCCcEEEec-CCCHHHHhcC-CCcCEEEEc-------CCccHHHHHHHcCCCEEeccch
Confidence 344 899997 9988655433 999999952 1257899999999999998764
No 50
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=97.86 E-value=0.0019 Score=63.84 Aligned_cols=106 Identities=14% Similarity=0.121 Sum_probs=73.0
Q ss_pred ccCCCCCeEEEEeccCCCCCC--hHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChH
Q 015058 252 FLKPNRPALVVSSTSWTPDED--FGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKE 329 (414)
Q Consensus 252 ~l~~~~~~~i~~vgrl~~~Kg--~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e 329 (414)
+++++++.+++..|.=.+.|. .+...+.++.+.++ +.+++++|...+++
T Consensus 180 g~~~~~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~-----------------------------g~~vvl~g~~~e~~ 230 (349)
T 3tov_A 180 GLTDTDILIGFNIGSAVPEKRWPAERFAHVADYFGRL-----------------------------GYKTVFFGGPMDLE 230 (349)
T ss_dssp TCCTTCCEEEEECCCSSGGGCCCHHHHHHHHHHHHHH-----------------------------TCEEEECCCTTTHH
T ss_pred CCCCCCCEEEEeCCCCCccCCCCHHHHHHHHHHHHhC-----------------------------CCeEEEEeCcchHH
Confidence 344456667777665334444 46788888887652 46778888766766
Q ss_pred HHHHHHHHcCCCcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEee
Q 015058 330 SYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLW 395 (414)
Q Consensus 330 ~l~~~i~~l~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~ 395 (414)
..++..+..+-..+.+.| ..+-.++..+++.||++|+..+ | |+=+ |.|.|+|+|+..
T Consensus 231 ~~~~i~~~~~~~~~~l~g-~~sl~e~~ali~~a~~~i~~Ds---G---~~Hl--Aaa~g~P~v~lf 287 (349)
T 3tov_A 231 MVQPVVEQMETKPIVATG-KFQLGPLAAAMNRCNLLITNDS---G---PMHV--GISQGVPIVALY 287 (349)
T ss_dssp HHHHHHHTCSSCCEECTT-CCCHHHHHHHHHTCSEEEEESS---H---HHHH--HHTTTCCEEEEC
T ss_pred HHHHHHHhcccccEEeeC-CCCHHHHHHHHHhCCEEEECCC---C---HHHH--HHhcCCCEEEEE
Confidence 666666655533466665 7788999999999999996421 2 3333 889999999854
No 51
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*
Probab=97.68 E-value=0.0014 Score=71.87 Aligned_cols=116 Identities=15% Similarity=0.082 Sum_probs=77.3
Q ss_pred cCCCCCeEEEEeccCCCCCChHH-HHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCC-ChHH
Q 015058 253 LKPNRPALVVSSTSWTPDEDFGI-LLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP-DKES 330 (414)
Q Consensus 253 l~~~~~~~i~~vgrl~~~Kg~~~-LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~-~~e~ 330 (414)
++|+.+ +++.+.|++++|+++. ++..+..+.+ |.++.+.....++|++.|+|. ..+.
T Consensus 522 vdpd~l-~~~~vkRl~eYKRq~Lnil~ii~~~~~--------------------i~~~~~~~~~p~q~If~GKA~P~y~~ 580 (796)
T 1l5w_A 522 INPQAI-FDIQIKRLHEYKRQHLNLLHILALYKE--------------------IRENPQADRVPRVFLFGAKAAPGYYL 580 (796)
T ss_dssp CCTTSE-EEEEESCCCGGGTHHHHHHHHHHHHHH--------------------HHTCTTCCCCCEEEEEECCCCTTCHH
T ss_pred cCCCcc-eEeeeecchhhcccCEeHHHHHHHHHH--------------------HhcCCCCCCCCeEEEEEecCChhHHH
Confidence 456664 8999999999999999 8888887753 111111112349999999995 3222
Q ss_pred H---HHHHHHc--------CCC---cEEEecCCCChhhHHHHHhhccEEEeeccCC---CCCCCchhHHHHHHcCCeEEE
Q 015058 331 Y---EEKIRRL--------RLK---RVAFRTMWLSAEDYPLLLGSADLGVCLHTSS---SGLDLPMKVCYCWYSRYSLKL 393 (414)
Q Consensus 331 l---~~~i~~l--------~l~---~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~---~g~~lP~kl~Eama~G~Pvi~ 393 (414)
- .+++.+. ... +|.|+- --..+--..++++||++..+++.+ +|. .=+-+|.-|.+-|.
T Consensus 581 aK~iIk~i~~va~~in~Dp~~~~~lKVvfl~-nY~vslA~~I~~gaDv~l~~S~a~~EAsGT----s~MKam~NGaL~iG 655 (796)
T 1l5w_A 581 AKNIIFAINKVADVINNDPLVGDKLKVVFLP-DYCVSAAEKLIPAADISEQISTAGKEASGT----GNMKLALNGALTVG 655 (796)
T ss_dssp HHHHHHHHHHHHHHHHTCTTTGGGEEEEECS-SCCHHHHHHHGGGCSEEEECCCTTTCCCCS----HHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHhccccccCCceEEEEEC-CCCHHHHHHHhhhcceeecCCCCCCCCCch----HHHHHHHcCCeeec
Confidence 2 2223332 222 599985 347777888999999999776532 343 34667888988886
Q ss_pred e
Q 015058 394 L 394 (414)
Q Consensus 394 s 394 (414)
+
T Consensus 656 t 656 (796)
T 1l5w_A 656 T 656 (796)
T ss_dssp C
T ss_pred C
Confidence 5
No 52
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}
Probab=97.51 E-value=0.0057 Score=67.09 Aligned_cols=119 Identities=13% Similarity=0.021 Sum_probs=77.4
Q ss_pred cCCCCCeEEEEeccCCCCCChHH-HHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCC-ChHH
Q 015058 253 LKPNRPALVVSSTSWTPDEDFGI-LLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP-DKES 330 (414)
Q Consensus 253 l~~~~~~~i~~vgrl~~~Kg~~~-LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~-~~e~ 330 (414)
++|+.+ +++.+.|++++|+++. ++..+..+.+ |.++.+.....++|++.|+|. ..+.
T Consensus 512 vdpd~l-~~~~vkRlheYKRq~Lnil~ii~~~~~--------------------i~~~~~~~~~p~q~If~GKA~P~y~~ 570 (796)
T 2c4m_A 512 IDPESI-FDVQIKRLHEYKRQLMNALYVLDLYFR--------------------IKEDGLTDIPARTVIFGAKAAPGYVR 570 (796)
T ss_dssp CCTTSE-EEEEECCCCGGGTHHHHHHHHHHHHHH--------------------HHTSCCCSSCCEEEEEECCCCTTCHH
T ss_pred CCCCCc-EEEEeecchhhcccCEeHHHHHHHHHH--------------------HhhCCCCCCCCeEEEEEecCCHhHHH
Confidence 456664 8999999999999999 8888887753 111111111349999999995 3222
Q ss_pred H---HHHHHHc--------CC--C-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEe
Q 015058 331 Y---EEKIRRL--------RL--K-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLL 394 (414)
Q Consensus 331 l---~~~i~~l--------~l--~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s 394 (414)
- .+++.+. .. . +|.|+- --..+--..++++||++..+++.+. |.=+..=+-+|.-|.+-|.+
T Consensus 571 aK~iIk~i~~va~~in~dp~~~~~lKVvFl~-nY~vslA~~I~~gaDv~l~~S~a~~-EAsGTs~MKam~NGaL~iGt 646 (796)
T 2c4m_A 571 AKAIIKLINSIADLVNNDPEVSPLLKVVFVE-NYNVSPAEHILPASDVSEQISTAGK-EASGTSNMKFMMNGALTLGT 646 (796)
T ss_dssp HHHHHHHHHHHHHHHHTCTTTTTTEEEEEET-TCCHHHHHHHGGGCSEEEECCCTTS-CSCCHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHHhccccccCCceEEEEEC-CCCHHHHHHHhhhcceeecCCCCCC-CCCchHHHHHHHcCCeEEec
Confidence 2 2222222 22 2 699986 4477788889999999997755321 11123446678889888865
No 53
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=96.98 E-value=0.0062 Score=66.17 Aligned_cols=113 Identities=9% Similarity=-0.057 Sum_probs=83.8
Q ss_pred ccccccCCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCC-C
Q 015058 248 GIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKG-P 326 (414)
Q Consensus 248 ~~~~~l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G-~ 326 (414)
+...+|+.+. ++..+..++ .|=-+..+++...+.++ .|+-.|++...+ .
T Consensus 514 R~~~gLp~~~-v~f~~fN~~--~Ki~p~~~~~W~~IL~~---------------------------vP~S~L~Ll~~~~~ 563 (723)
T 4gyw_A 514 RSQYGLPEDA-IVYCNFNQL--YKIDPSTLQMWANILKR---------------------------VPNSVLWLLRFPAV 563 (723)
T ss_dssp GGGGTCCTTS-EEEECCSCG--GGCCHHHHHHHHHHHHH---------------------------CSSEEEEEEETTGG
T ss_pred hhhcCCCCCC-EEEEeCCcc--ccCCHHHHHHHHHHHHh---------------------------CCCCeEEEEeCcHH
Confidence 5566787665 344444444 45567778888887775 578777665543 4
Q ss_pred ChHHHHHHHHHcCCC--cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEee
Q 015058 327 DKESYEEKIRRLRLK--RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLW 395 (414)
Q Consensus 327 ~~e~l~~~i~~l~l~--~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~ 395 (414)
.++.+++.+++.|+. ||.|.+ ..+.+|.-..++.+||++=+ -. .+=.+..+||+++|+|||+..
T Consensus 564 ~~~~l~~~~~~~gi~~~r~~f~~-~~~~~~~l~~~~~~Di~LDt--~p--~~g~tT~~eal~~GvPvvt~~ 629 (723)
T 4gyw_A 564 GEPNIQQYAQNMGLPQNRIIFSP-VAPKEEHVRRGQLADVCLDT--PL--CNGHTTGMDVLWAGTPMVTMP 629 (723)
T ss_dssp GHHHHHHHHHHTTCCGGGEEEEE-CCCHHHHHHHGGGCSEEECC--SS--SCCSHHHHHHHHTTCCEEBCC
T ss_pred HHHHHHHHHHhcCCCcCeEEECC-CCCHHHHHHHhCCCeEEeCC--CC--cCCHHHHHHHHHcCCCEEEcc
Confidence 577899999999997 999997 89999999999999999821 11 112457899999999999854
No 54
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=96.82 E-value=0.14 Score=52.28 Aligned_cols=44 Identities=11% Similarity=0.114 Sum_probs=32.1
Q ss_pred cEEEecCCCChhhHHHHHhhccE--EEeeccCCCCCCCchhHHHHHHcCCeEEEeee
Q 015058 342 RVAFRTMWLSAEDYPLLLGSADL--GVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWT 396 (414)
Q Consensus 342 ~V~f~g~~v~~ed~~~~l~~aDl--~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~ 396 (414)
|+...+ |+|..+ +|+.+++ ||+ | .| -+.+.|++++|+|+|+--.
T Consensus 354 ~~~v~~-~~pq~~---~L~h~~~~~~vt-h---~G---~~s~~Eal~~GvP~i~~P~ 399 (482)
T 2pq6_A 354 RGLIAS-WCPQDK---VLNHPSIGGFLT-H---CG---WNSTTESICAGVPMLCWPF 399 (482)
T ss_dssp TEEEES-CCCHHH---HHTSTTEEEEEE-C---CC---HHHHHHHHHHTCCEEECCC
T ss_pred CEEEEe-ecCHHH---HhcCCCCCEEEe-c---CC---cchHHHHHHcCCCEEecCc
Confidence 888886 998764 7866555 663 2 12 3579999999999998543
No 55
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=96.80 E-value=0.0035 Score=60.49 Aligned_cols=103 Identities=17% Similarity=0.147 Sum_probs=70.4
Q ss_pred CCCCeEEEEecc-CCCCCChH--HHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHH
Q 015058 255 PNRPALVVSSTS-WTPDEDFG--ILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESY 331 (414)
Q Consensus 255 ~~~~~~i~~vgr-l~~~Kg~~--~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l 331 (414)
.+++.+++..|. ..+.|... .+.++++.+.+ . +++++++|...+++..
T Consensus 178 ~~~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~----------------------------~-~~~vvl~g~~~e~~~~ 228 (348)
T 1psw_A 178 SERPMIGFCPGAEFGPAKRWPHYHYAELAKQLID----------------------------E-GYQVVLFGSAKDHEAG 228 (348)
T ss_dssp SSSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHH----------------------------T-TCEEEECCCGGGHHHH
T ss_pred CCCcEEEEECCCCccccCCCCHHHHHHHHHHHHH----------------------------C-CCeEEEEeChhhHHHH
Confidence 345667778777 65655554 88888888764 1 5788898866665555
Q ss_pred HHHHHHcCC---CcE-EEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEee
Q 015058 332 EEKIRRLRL---KRV-AFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLW 395 (414)
Q Consensus 332 ~~~i~~l~l---~~V-~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~ 395 (414)
++..+..+- .++ .+.| ..+-.++..+++.||++|... +| |+ --|.|.|+|+|+..
T Consensus 229 ~~i~~~~~~~~~~~~~~l~g-~~sl~e~~ali~~a~l~I~~D---sg---~~--HlAaa~g~P~v~lf 287 (348)
T 1psw_A 229 NEILAALNTEQQAWCRNLAG-ETQLDQAVILIAACKAIVTND---SG---LM--HVAAALNRPLVALY 287 (348)
T ss_dssp HHHHTTSCHHHHTTEEECTT-TSCHHHHHHHHHTSSEEEEES---SH---HH--HHHHHTTCCEEEEE
T ss_pred HHHHHhhhhccccceEeccC-cCCHHHHHHHHHhCCEEEecC---CH---HH--HHHHHcCCCEEEEE
Confidence 554433321 134 5555 788999999999999999642 22 33 33999999999854
No 56
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=96.59 E-value=0.0069 Score=58.65 Aligned_cols=66 Identities=9% Similarity=0.067 Sum_probs=51.1
Q ss_pred EEEEEcCCC-ChHHHHHHHHHcCCCcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeee
Q 015058 318 LFIITGKGP-DKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWT 396 (414)
Q Consensus 318 ~liI~G~G~-~~e~l~~~i~~l~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~ 396 (414)
-.+|+|.|. ..+++++.+++. .++.+.+ ..++++.+|++||+.|+. + | +.+.|++++|+|.|.-..
T Consensus 186 i~vv~G~~~~~~~~l~~~~~~~--~~v~v~~---~~~~m~~~m~~aDlvI~~-----g-G--~T~~E~~~~g~P~i~ip~ 252 (282)
T 3hbm_A 186 ISIATSSSNPNLKKLQKFAKLH--NNIRLFI---DHENIAKLMNESNKLIIS-----A-S--SLVNEALLLKANFKAICY 252 (282)
T ss_dssp EEEEECTTCTTHHHHHHHHHTC--SSEEEEE---SCSCHHHHHHTEEEEEEE-----S-S--HHHHHHHHTTCCEEEECC
T ss_pred EEEEECCCchHHHHHHHHHhhC--CCEEEEe---CHHHHHHHHHHCCEEEEC-----C-c--HHHHHHHHcCCCEEEEeC
Confidence 346788874 567777776543 3899988 678999999999999963 1 2 479999999999998543
No 57
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=96.57 E-value=0.22 Score=50.68 Aligned_cols=44 Identities=14% Similarity=-0.031 Sum_probs=33.8
Q ss_pred cEEEecCCCChhhHHHHHh--hccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeee
Q 015058 342 RVAFRTMWLSAEDYPLLLG--SADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWT 396 (414)
Q Consensus 342 ~V~f~g~~v~~ed~~~~l~--~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~ 396 (414)
|+...+ |+|.. .+|+ ++|+||+ | .| -+.+.|++++|+|+|+--.
T Consensus 326 ~~~v~~-w~pq~---~vL~h~~~~~fvt-h---~G---~~S~~Eal~~GvP~i~~P~ 371 (456)
T 2c1x_A 326 YGMVVP-WAPQA---EVLAHEAVGAFVT-H---CG---WNSLWESVAGGVPLICRPF 371 (456)
T ss_dssp TEEEES-CCCHH---HHHTSTTEEEEEE-C---CC---HHHHHHHHHHTCCEEECCC
T ss_pred ceEEec-CCCHH---HHhcCCcCCEEEe-c---CC---cchHHHHHHhCceEEecCC
Confidence 788886 99874 5688 8899995 2 12 3578999999999998543
No 58
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=96.52 E-value=0.015 Score=62.83 Aligned_cols=190 Identities=11% Similarity=0.082 Sum_probs=104.7
Q ss_pred HhhcCCeEEEEEcCcchhhhhhccCCC----cHHHHHHHHHHHHHhccCCEEEEeCHHHHHHHHHhhCCc-EEEecCC-C
Q 015058 123 SSLRRSAFIVDWHNFGYTLLSLSLGRR----SHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQNWGIK-ATVLYDQ-P 196 (414)
Q Consensus 123 ~~~~~~~~Iv~~H~~~~~l~~~~~~~~----~~~~~i~~~~Ek~~~k~ad~ii~vS~~~~~~l~~~~gi~-i~vI~n~-~ 196 (414)
.+..+..+|-+||+.+..-.+...... .......+.+.+ ..+..|.+++.|+.+.+.+++.++.+ -.++.-| |
T Consensus 432 ~k~~~~~~iq~wHG~~lK~~g~d~~~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~s~~~~~~~~~~f~~~~~~i~~~G~P 510 (729)
T 3l7i_A 432 NKKENQTYIQTWHGTPLKRLANDMKVVRMPGTTTPKYKRNFNR-ETSRWDYLISPNRYSTEIFRSAFWMDEERILEIGYP 510 (729)
T ss_dssp CCCTTCEEEECCSSCCSBCCGGGCSCCCCTTCCHHHHHHHHHH-HHTTCSEEEESSHHHHHHHHHHTCCCGGGEEESCCG
T ss_pred ccCCCcEEEECCCCCchhhccccccccccccccCHHHHHHHHH-hhccCCEEEeCCHHHHHHHHHHhCCCcceEEEcCCC
Confidence 344567778899998542222111100 111111111111 23678999999999999999888886 3344444 3
Q ss_pred C-C-Cc-CCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCCccceeeeccccccccCCCCCeEEEEeccCCCCCC-
Q 015058 197 P-E-FF-HPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDED- 272 (414)
Q Consensus 197 ~-~-~f-~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~vgrl~~~Kg- 272 (414)
- + .| .+...+.+.++++++ +++++++ +|+|+-.|++..-
T Consensus 511 R~D~l~~~~~~~~~~~~~~~~~------------------------------------~~~~~kk-~ILyaPT~r~~~~~ 553 (729)
T 3l7i_A 511 RNDVLVNRANDQEYLDEIRTHL------------------------------------NLPSDKK-VIMYAPTWRDDEFV 553 (729)
T ss_dssp GGHHHHHSTTCHHHHHHHHHHT------------------------------------TCCSSCE-EEEECCCCCGGGCC
T ss_pred chHHHhcccchHHHHHHHHHHh------------------------------------CCCCCCe-EEEEeeeeeCCccc
Confidence 1 1 22 222323345566554 3455664 8999988887521
Q ss_pred --------hHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHHHHHHHHcCCC-cE
Q 015058 273 --------FGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLK-RV 343 (414)
Q Consensus 273 --------~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l~~~i~~l~l~-~V 343 (414)
...-++.+.. .+ .++..+++-. . ..+.+.....+.+ .+
T Consensus 554 ~~~~~~~~~~~~~~~l~~----------------------~l-------~~~~~li~r~--H--p~~~~~~~~~~~~~~~ 600 (729)
T 3l7i_A 554 SKGKYLFELKIDLDNLYK----------------------EL-------GDDYVILLRM--H--YLISNALDLSGYENFA 600 (729)
T ss_dssp GGGSSCCCCTTCHHHHHH----------------------HH-------TTTEEEEECC--C--HHHHTTCCCTTCTTTE
T ss_pred cccccccchhhHHHHHHH----------------------Hc-------CCCeEEEEec--C--cchhccccccccCCcE
Confidence 1111222211 11 1256666542 1 1111111112334 45
Q ss_pred EEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEe
Q 015058 344 AFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLL 394 (414)
Q Consensus 344 ~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s 394 (414)
.... ...|+..+|..||+.|+ . ..+.++|++..++|||..
T Consensus 601 ~~~~---~~~di~~ll~~aD~lIT-D-------ySSv~fD~~~l~kPiif~ 640 (729)
T 3l7i_A 601 IDVS---NYNDVSELFLISDCLIT-D-------YSSVMFDYGILKRPQFFF 640 (729)
T ss_dssp EECT---TCSCHHHHHHTCSEEEE-S-------SCTHHHHHGGGCCCEEEE
T ss_pred EeCC---CCcCHHHHHHHhCEEEe-e-------chHHHHhHHhhCCCEEEe
Confidence 5544 56799999999999994 2 233689999999999986
No 59
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=96.34 E-value=1.1 Score=45.58 Aligned_cols=99 Identities=12% Similarity=0.043 Sum_probs=58.9
Q ss_pred CCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEE-EcCC--CChHHHH
Q 015058 256 NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFII-TGKG--PDKESYE 332 (414)
Q Consensus 256 ~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI-~G~G--~~~e~l~ 332 (414)
+++.++++-|++...-+.+.+.+++..+.+. +.+|+. +|++ ...+.++
T Consensus 275 ~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~-----------------------------~~~~l~~~~~~~~~l~~~~~ 325 (463)
T 2acv_A 275 DKSVVFLCFGSMGVSFGPSQIREIALGLKHS-----------------------------GVRFLWSNSAEKKVFPEGFL 325 (463)
T ss_dssp TTCEEEEECCSSCCCCCHHHHHHHHHHHHHH-----------------------------TCEEEEECCCCGGGSCTTHH
T ss_pred CCceEEEEeccccccCCHHHHHHHHHHHHhC-----------------------------CCcEEEEECCCcccCChhHH
Confidence 4556788889887323434444444444331 356654 5543 1213333
Q ss_pred HHHHHcCCCcEEEecCCCChhhHHHHHh--hccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeee
Q 015058 333 EKIRRLRLKRVAFRTMWLSAEDYPLLLG--SADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWT 396 (414)
Q Consensus 333 ~~i~~l~l~~V~f~g~~v~~ed~~~~l~--~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~ 396 (414)
+.... -.++...+ |+|..+ +|+ ++|+||+ | .| -+.+.|++++|+|+|+--.
T Consensus 326 ~~~~~--~~~~~v~~-w~pq~~---vL~h~~~~~fvt-h---~G---~~s~~Eal~~GvP~i~~P~ 378 (463)
T 2acv_A 326 EWMEL--EGKGMICG-WAPQVE---VLAHKAIGGFVS-H---CG---WNSILESMWFGVPILTWPI 378 (463)
T ss_dssp HHHHH--HCSEEEES-SCCHHH---HHHSTTEEEEEE-C---CC---HHHHHHHHHTTCCEEECCC
T ss_pred Hhhcc--CCCEEEEc-cCCHHH---HhCCCccCeEEe-c---CC---chhHHHHHHcCCCeeeccc
Confidence 33310 12778886 998754 575 7899995 2 12 3579999999999998543
No 60
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ...
Probab=96.15 E-value=0.072 Score=58.71 Aligned_cols=128 Identities=16% Similarity=0.059 Sum_probs=82.6
Q ss_pred cCCCCCeEEEEeccCCCCCChHHH-HHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCC-ChHH
Q 015058 253 LKPNRPALVVSSTSWTPDEDFGIL-LEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP-DKES 330 (414)
Q Consensus 253 l~~~~~~~i~~vgrl~~~Kg~~~L-leA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~-~~e~ 330 (414)
++|+.+ +++.+.|++++|+++.+ +..+..+.+ |.++.+.....++|++.|+|. .-+.
T Consensus 546 vdpd~l-~~g~vkRl~eYKRq~L~~l~~i~~~~~--------------------i~~~~~~~~~p~q~If~GKA~P~y~~ 604 (824)
T 2gj4_A 546 INPNSL-FDVQVKRIHEYKRQLLNCLHVITLYNR--------------------IKKEPNKFVVPRTVMIGGKAAPGYHM 604 (824)
T ss_dssp CCTTSE-EEEEESCCCGGGTHHHHHHHHHHHHHH--------------------HHHCTTSCCCCEEEEEECCCCTTCHH
T ss_pred cCCCcc-eEeeeecchhhcchhhHHHHHHHHHHH--------------------HHhCCCCCCCCEEEEEEEeCCHhHHH
Confidence 456664 89999999999999997 787777642 111111111258999999995 3222
Q ss_pred -------HHHHHHHc------CCC-cEEEecCCCChhhHHHHHhhccEEEeeccCC---CCCCCchhHHHHHHcCCeEEE
Q 015058 331 -------YEEKIRRL------RLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSS---SGLDLPMKVCYCWYSRYSLKL 393 (414)
Q Consensus 331 -------l~~~i~~l------~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~---~g~~lP~kl~Eama~G~Pvi~ 393 (414)
+.+.++.. +=. +|.|+- --..+--..++++||++..+++.+ +|. .=+-+|.-|.+-|+
T Consensus 605 aK~iIkli~~va~~in~Dp~v~~~lKVvFl~-nYdvslA~~I~~gaDv~l~~S~ag~EAsGT----s~MKamlNGaLtig 679 (824)
T 2gj4_A 605 AKMIIKLITAIGDVVNHDPVVGDRLRVIFLE-NYRVSLAEKVIPAADLSEQISTAGTEASGT----GNMKFMLNGALTIG 679 (824)
T ss_dssp HHHHHHHHHHHHHHHTTCTTTGGGEEEEEET-TCCHHHHHHHGGGCSEEEECCCTTSCSCCS----HHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHhccCcccCCceEEEEEC-CCCHHHHHHHhhhcceeecCCCCCCCCCch----HHHHHHHcCceEEE
Confidence 22233222 111 699985 347777888999999999775532 343 34667888888887
Q ss_pred eee----------CCcccchhhh
Q 015058 394 LWT----------CSVVGCLFVL 406 (414)
Q Consensus 394 s~~----------~~~~~~~~~~ 406 (414)
+-. +..+|-+|-.
T Consensus 680 tlDGanvEi~e~vG~~Ngf~FG~ 702 (824)
T 2gj4_A 680 TMDGANVEMAEEAGEENFFIFGM 702 (824)
T ss_dssp CSCTTHHHHHHHHCGGGSEECSC
T ss_pred EecCccchhhhccCCCCEEEeCC
Confidence 654 4556766643
No 61
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=95.84 E-value=0.5 Score=48.44 Aligned_cols=46 Identities=20% Similarity=0.192 Sum_probs=32.8
Q ss_pred cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeee
Q 015058 342 RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWT 396 (414)
Q Consensus 342 ~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~ 396 (414)
|+...+ |+|. ..+|+.+|++++.+ -.| -+.+.|++++|+|+|+--.
T Consensus 328 ~~~vv~-w~Pq---~~vL~h~~v~~fvt--H~G---~~S~~Eal~~GvP~i~~P~ 373 (454)
T 3hbf_A 328 KGKIVA-WAPQ---VEILKHSSVGVFLT--HSG---WNSVLECIVGGVPMISRPF 373 (454)
T ss_dssp TEEEES-SCCH---HHHHHSTTEEEEEE--CCC---HHHHHHHHHHTCCEEECCC
T ss_pred ceEEEe-eCCH---HHHHhhcCcCeEEe--cCC---cchHHHHHHcCCCEecCcc
Confidence 788886 9986 36888899543221 112 3478999999999998543
No 62
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=95.44 E-value=2.7 Score=42.89 Aligned_cols=43 Identities=14% Similarity=0.027 Sum_probs=30.3
Q ss_pred EEEecCCCChhhHHHHHhhccE--EEeeccCCCCCCCchhHHHHHHcCCeEEEeee
Q 015058 343 VAFRTMWLSAEDYPLLLGSADL--GVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWT 396 (414)
Q Consensus 343 V~f~g~~v~~ed~~~~l~~aDl--~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~ 396 (414)
+...+ |+|.. .+|+.+|+ ||+ |. | -+.+.|++++|+|+|+--.
T Consensus 341 ~~v~~-w~Pq~---~vL~h~~v~~fvt-Hg---G---~~S~~Eal~~GvP~i~~P~ 385 (480)
T 2vch_A 341 FVIPF-WAPQA---QVLAHPSTGGFLT-HC---G---WNSTLESVVSGIPLIAWPL 385 (480)
T ss_dssp EEEES-CCCHH---HHHHSTTEEEEEE-CC---C---HHHHHHHHHHTCCEEECCC
T ss_pred EEEeC-ccCHH---HHhCCCCcCeEEe-cc---c---chhHHHHHHcCCCEEeccc
Confidence 45544 98865 68888885 442 31 2 3478999999999998443
No 63
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=95.42 E-value=0.027 Score=52.83 Aligned_cols=45 Identities=11% Similarity=0.010 Sum_probs=34.8
Q ss_pred cEEEecCCCChhhHHHHHh-hccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeee
Q 015058 342 RVAFRTMWLSAEDYPLLLG-SADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWT 396 (414)
Q Consensus 342 ~V~f~g~~v~~ed~~~~l~-~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~ 396 (414)
++...+ ..++++.+|+ .||++|+- .| .+.+.|++++|+|.|.--.
T Consensus 115 ~v~v~~---f~~~m~~~l~~~AdlvIsh----aG---agTv~Eal~~G~P~IvVP~ 160 (224)
T 2jzc_A 115 KVIGFD---FSTKMQSIIRDYSDLVISH----AG---TGSILDSLRLNKPLIVCVN 160 (224)
T ss_dssp EEEECC---SSSSHHHHHHHHCSCEEES----SC---HHHHHHHHHTTCCCCEECC
T ss_pred eEEEee---ccchHHHHHHhcCCEEEEC----Cc---HHHHHHHHHhCCCEEEEcC
Confidence 455554 4589999999 99999952 12 4579999999999988543
No 64
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=93.72 E-value=0.099 Score=50.04 Aligned_cols=100 Identities=13% Similarity=0.060 Sum_probs=63.1
Q ss_pred CCeEEEEeccCCCCCC--hHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEEEEEEcCCCChHHHHHH
Q 015058 257 RPALVVSSTSWTPDED--FGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEK 334 (414)
Q Consensus 257 ~~~~i~~vgrl~~~Kg--~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~liI~G~G~~~e~l~~~ 334 (414)
++.+++..|.=.+.|. .+...+.++.+.+ .+.++++.+.|+...++.+.
T Consensus 178 ~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~-----------------------------~~~~vvl~~g~~~e~~~~~~ 228 (326)
T 2gt1_A 178 GEYAVFLHATTRDDKHWPEEHWRELIGLLAD-----------------------------SGIRIKLPWGAPHEEERAKR 228 (326)
T ss_dssp TSEEEEECCCSSGGGSCCHHHHHHHHHHTTT-----------------------------TCCEEEECCSSHHHHHHHHH
T ss_pred CCEEEEEeCCCCccccCCHHHHHHHHHHHHH-----------------------------CCCcEEEecCCHHHHHHHHH
Confidence 4456665554334444 3467777766642 25778887445544333333
Q ss_pred HHHcCCCcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEee
Q 015058 335 IRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLW 395 (414)
Q Consensus 335 i~~l~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~ 395 (414)
+.+ ...++.+.| ..+-.++..+++.||++|+..+ | |+=+ |.|.|+|+|+..
T Consensus 229 i~~-~~~~~~l~g-~~sl~el~ali~~a~l~I~~DS---G---~~Hl--Aaa~g~P~v~lf 279 (326)
T 2gt1_A 229 LAE-GFAYVEVLP-KMSLEGVARVLAGAKFVVSVDT---G---LSHL--TAALDRPNITVY 279 (326)
T ss_dssp HHT-TCTTEEECC-CCCHHHHHHHHHTCSEEEEESS---H---HHHH--HHHTTCCEEEEE
T ss_pred HHh-hCCcccccC-CCCHHHHHHHHHhCCEEEecCC---c---HHHH--HHHcCCCEEEEE
Confidence 433 234567776 7889999999999999996522 2 3333 778999999853
No 65
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=62.16 E-value=50 Score=26.79 Aligned_cols=127 Identities=16% Similarity=0.066 Sum_probs=65.3
Q ss_pred EEEEeCCCCCChHHHHHHHHHHhhCCCcEEEEecCCCCCCcccccCCCeEEEEeecCCCCCCCCCCchHHHHHHHHHHHH
Q 015058 8 CVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQ 87 (414)
Q Consensus 8 ~v~~~~d~~~~~r~~~~a~~La~~~g~eV~vv~~~~~~~~~~~~~~~~i~i~~v~~~~~~~~~~~~~~~~~~~l~k~l~~ 87 (414)
++++.| .|.-+ +..+..|.++ |++|.++...+.. .+.....+++++... .. ... .+.+
T Consensus 8 ~v~I~G-~G~iG--~~la~~L~~~-g~~V~~id~~~~~--~~~~~~~~~~~~~gd--~~-------~~~-------~l~~ 65 (141)
T 3llv_A 8 EYIVIG-SEAAG--VGLVRELTAA-GKKVLAVDKSKEK--IELLEDEGFDAVIAD--PT-------DES-------FYRS 65 (141)
T ss_dssp SEEEEC-CSHHH--HHHHHHHHHT-TCCEEEEESCHHH--HHHHHHTTCEEEECC--TT-------CHH-------HHHH
T ss_pred EEEEEC-CCHHH--HHHHHHHHHC-CCeEEEEECCHHH--HHHHHHCCCcEEECC--CC-------CHH-------HHHh
Confidence 456666 33322 3457888886 9999998865421 111223455554433 11 111 1111
Q ss_pred HHHHHHHHhhhcCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccC
Q 015058 88 FFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMA 167 (414)
Q Consensus 88 ~~~l~~~l~~k~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~a 167 (414)
....+.|+|++..+..-....++..++.....++|+..++..+ .. . ...-.+
T Consensus 66 ---------~~~~~~d~vi~~~~~~~~n~~~~~~a~~~~~~~iia~~~~~~~-------------~~---~---l~~~G~ 117 (141)
T 3llv_A 66 ---------LDLEGVSAVLITGSDDEFNLKILKALRSVSDVYAIVRVSSPKK-------------KE---E---FEEAGA 117 (141)
T ss_dssp ---------SCCTTCSEEEECCSCHHHHHHHHHHHHHHCCCCEEEEESCGGG-------------HH---H---HHHTTC
T ss_pred ---------CCcccCCEEEEecCCHHHHHHHHHHHHHhCCceEEEEEcChhH-------------HH---H---HHHcCC
Confidence 0135899988877622222334445555443345555544321 00 1 111357
Q ss_pred CEEEEeCHHHHHHHHHh
Q 015058 168 NGCLCVTQAMQHELAQN 184 (414)
Q Consensus 168 d~ii~vS~~~~~~l~~~ 184 (414)
|.++...+.....+.+.
T Consensus 118 ~~vi~p~~~~~~~l~~~ 134 (141)
T 3llv_A 118 NLVVLVADAVKQAFMDK 134 (141)
T ss_dssp SEEEEHHHHHHHHHHHH
T ss_pred CEEECHHHHHHHHHHHH
Confidence 88888888777776654
No 66
>2k6g_A Replication factor C subunit 1; protein, BRCT, DNA binding, activator, alternative splicing, ATP-binding, DNA replication, DNA- binding; NMR {Homo sapiens} PDB: 2k7f_A
Probab=61.19 E-value=16 Score=30.08 Aligned_cols=72 Identities=21% Similarity=0.099 Sum_probs=50.3
Q ss_pred hhcCCccCCCCcEEEEEEcCC--CChHHHHHHHHHcCCCcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHH
Q 015058 305 EISDGKQYLYPRLLFIITGKG--PDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVC 382 (414)
Q Consensus 305 ~~~~~~~~~~p~i~liI~G~G--~~~e~l~~~i~~l~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~ 382 (414)
++..+......+..|+|+|.= -.+++++++++++|-+ +.+ .|+ ...|..|+-. .. -|+|+-
T Consensus 24 ~~p~~~~~~l~G~~~v~TG~l~~~~R~e~~~~i~~~Gg~---v~~-sVS--------kkTd~LV~G~--~~---g~sK~~ 86 (109)
T 2k6g_A 24 EIPKGAENCLEGLIFVITGVLESIERDEAKSLIERYGGK---VTG-NVS--------KKTNYLVMGR--DS---GQSKSD 86 (109)
T ss_dssp CCCCCCTTTTTTCEEEEESBCSSCCHHHHHHHHHHTTCE---EES-SCC--------TTCCEEEECB--CC---CHHHHH
T ss_pred cCCCCCCCCCCCCEEEEeeeCCCCCHHHHHHHHHHcCCE---eeC-ccc--------CCceEEEECC--CC---ChHHHH
Confidence 444444444567899999974 3689999999999864 334 344 3667777531 11 268999
Q ss_pred HHHHcCCeEEE
Q 015058 383 YCWYSRYSLKL 393 (414)
Q Consensus 383 Eama~G~Pvi~ 393 (414)
.|...|+|||.
T Consensus 87 kA~~lgI~Ii~ 97 (109)
T 2k6g_A 87 KAAALGTKIID 97 (109)
T ss_dssp HHHHHTCEEEC
T ss_pred HHHHcCCeEEe
Confidence 99999999984
No 67
>3geb_A EYES absent homolog 2; hydrolase, activator, alternative splicing, cytoplasm, developmental protein, magnesium, nucleus, polymorphism; 2.40A {Homo sapiens} PDB: 3hb0_A 3hb1_A
Probab=56.12 E-value=11 Score=36.07 Aligned_cols=45 Identities=13% Similarity=0.277 Sum_probs=34.4
Q ss_pred CCcEEEEEEcCCCChHHHHHHHHHcCCCcEEEecCCCChhhHHHHHhhccEE
Q 015058 314 YPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLG 365 (414)
Q Consensus 314 ~p~i~liI~G~G~~~e~l~~~i~~l~l~~V~f~g~~v~~ed~~~~l~~aDl~ 365 (414)
.|++.|+++|+|++++ +.++.+++.-++.. ++.|+..+..+-|+.
T Consensus 228 G~k~~yvvIGDG~eEe---~AAk~~n~PFwrI~----~h~Dl~~l~~al~l~ 272 (274)
T 3geb_A 228 GRKAVYVVIGDGVEEE---QGAKKHNMPFWRIS----CHADLEALRHALELE 272 (274)
T ss_dssp CTTSEEEEEESSHHHH---HHHHHTTCCEEECC----SHHHHHHHHHHHHHE
T ss_pred CCCceEEEECCCHHHH---HHHHHcCCCeEEee----cCccHHHHHHhhccc
Confidence 4789999999999866 46777888755553 688888887776654
No 68
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=56.10 E-value=80 Score=30.84 Aligned_cols=86 Identities=23% Similarity=0.201 Sum_probs=44.5
Q ss_pred EEEEeCCCCchHHHHHHHHHhhcCCeEEE-EEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEE--EeCHHHHHH
Q 015058 104 VFLVQNPPSVPTLVAVKWASSLRRSAFIV-DWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCL--CVTQAMQHE 180 (414)
Q Consensus 104 vvh~~~pp~~~~~~~~~la~~~~~~~~Iv-~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii--~vS~~~~~~ 180 (414)
+.....-|+.-+=..--.+.+.+|..++. +.-+. ++++.-.+.-.. +.+.+++|.|+ .-.+...+.
T Consensus 51 la~lF~e~STRTR~SFE~A~~~LGg~~i~l~~~~s-------s~~kgEsl~DTa----rvLs~~~D~iviR~~~~~~~~~ 119 (323)
T 3gd5_A 51 LGLVFLKASTRTRVSFTVAMYQLGGQVIDLSPSNT-------QVGRGEPVRDTA----RVLGRYVDGLAIRTFAQTELEE 119 (323)
T ss_dssp EEEEESSCCHHHHHHHHHHHHHTTCEEEEC-----------------CCHHHHH----HHHTTTCSEEEEECSSHHHHHH
T ss_pred EEEEecCCCcchHhhHHHHHHHcCCeEEEeCcccc-------cCCCCCCHHHHH----HHHHHhCCEEEEecCChhHHHH
Confidence 34444445666654434445556666554 32211 122222222222 35567899887 446677788
Q ss_pred HHHhhCCcEEEecCC-CCCCcCCCC
Q 015058 181 LAQNWGIKATVLYDQ-PPEFFHPTS 204 (414)
Q Consensus 181 l~~~~gi~i~vI~n~-~~~~f~p~~ 204 (414)
+++.-+++ || |+ + +.+||+.
T Consensus 120 lA~~~~vP--VI-Nag~-~~~HPtQ 140 (323)
T 3gd5_A 120 YAHYAGIP--VI-NALT-DHEHPCQ 140 (323)
T ss_dssp HHHHHCSC--EE-EEEC-SSCCHHH
T ss_pred HHHhCCCC--EE-eCCC-CCCCcHH
Confidence 88776666 34 55 6 7899973
No 69
>2ebu_A Replication factor C subunit 1; A/B/A 3 layers, parallel beta-sheet, DNA replication, clamp loader, RFC1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=55.61 E-value=20 Score=29.65 Aligned_cols=73 Identities=21% Similarity=0.105 Sum_probs=52.2
Q ss_pred hhhcCCccCCCCcEEEEEEcCC--CChHHHHHHHHHcCCCcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhH
Q 015058 304 KEISDGKQYLYPRLLFIITGKG--PDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKV 381 (414)
Q Consensus 304 ~~~~~~~~~~~p~i~liI~G~G--~~~e~l~~~i~~l~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl 381 (414)
|++..+.+....+..|+|.|.= -.+++++++++++|-+ +.+ .|+ ...|..|+-. . .-|+|+
T Consensus 13 k~~P~~~~~~l~G~~~v~TG~l~~~~R~e~~~~i~~~Ggk---v~~-sVS--------kkTd~LV~G~--~---~g~sKl 75 (112)
T 2ebu_A 13 KEIPKGAENCLEGLIFVITGVLESIERDEAKSLIERYGGK---VTG-NVS--------KKTNYLVMGR--D---SGQSKS 75 (112)
T ss_dssp SCCCCCCSSSSTTCEEEECSCCSSSCHHHHHHHHHHTTCE---ECS-SCC--------SSCCEEEECS--S---CCSHHH
T ss_pred ccCCCCCCCCcCCCEEEEeeeCCCCCHHHHHHHHHHcCCE---Eec-ccc--------CCeeEEEecC--C---CChHHH
Confidence 5666665555667899999974 4689999999999864 333 333 3567777531 1 126899
Q ss_pred HHHHHcCCeEEE
Q 015058 382 CYCWYSRYSLKL 393 (414)
Q Consensus 382 ~Eama~G~Pvi~ 393 (414)
-.|...|+|||.
T Consensus 76 ~KA~~lgI~Iis 87 (112)
T 2ebu_A 76 DKAAALGTKIID 87 (112)
T ss_dssp HHHHHHTCEEEE
T ss_pred HHHHHcCCeEEe
Confidence 999999999986
No 70
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=48.92 E-value=99 Score=25.20 Aligned_cols=127 Identities=11% Similarity=0.072 Sum_probs=68.5
Q ss_pred EEEEeCCCCCChHHHHHHHHHHhhCCCcEEEEecCCCCCCcccccCCCeEEEEeecCCCCCCCCCCchHHHHHHHHHHHH
Q 015058 8 CVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQ 87 (414)
Q Consensus 8 ~v~~~~d~~~~~r~~~~a~~La~~~g~eV~vv~~~~~~~~~~~~~~~~i~i~~v~~~~~~~~~~~~~~~~~~~l~k~l~~ 87 (414)
++++.| +|+.++ ..+..|.+. |++|.++...+.. .+.....++.+..-. .. ... .+.+
T Consensus 9 ~viIiG-~G~~G~--~la~~L~~~-g~~v~vid~~~~~--~~~~~~~g~~~i~gd--~~-------~~~-------~l~~ 66 (140)
T 3fwz_A 9 HALLVG-YGRVGS--LLGEKLLAS-DIPLVVIETSRTR--VDELRERGVRAVLGN--AA-------NEE-------IMQL 66 (140)
T ss_dssp CEEEEC-CSHHHH--HHHHHHHHT-TCCEEEEESCHHH--HHHHHHTTCEEEESC--TT-------SHH-------HHHH
T ss_pred CEEEEC-cCHHHH--HHHHHHHHC-CCCEEEEECCHHH--HHHHHHcCCCEEECC--CC-------CHH-------HHHh
Confidence 455556 333333 346788885 9999999866432 111223566664433 11 111 1111
Q ss_pred HHHHHHHHhhhcCCCcEEEEeCCCCchHHHHHHHHHhhc-CCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhcc
Q 015058 88 FFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLR-RSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKM 166 (414)
Q Consensus 88 ~~~l~~~l~~k~~~~Dvvh~~~pp~~~~~~~~~la~~~~-~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ 166 (414)
....+.|++++..+.......++..++.+. ..++|...++..+ . +.+..-.
T Consensus 67 ---------a~i~~ad~vi~~~~~~~~n~~~~~~a~~~~~~~~iiar~~~~~~-------------~------~~l~~~G 118 (140)
T 3fwz_A 67 ---------AHLECAKWLILTIPNGYEAGEIVASARAKNPDIEIIARAHYDDE-------------V------AYITERG 118 (140)
T ss_dssp ---------TTGGGCSEEEECCSCHHHHHHHHHHHHHHCSSSEEEEEESSHHH-------------H------HHHHHTT
T ss_pred ---------cCcccCCEEEEECCChHHHHHHHHHHHHHCCCCeEEEEECCHHH-------------H------HHHHHCC
Confidence 012589998888764333334555555553 4566665554321 0 1111146
Q ss_pred CCEEEEeCHHHHHHHHHh
Q 015058 167 ANGCLCVTQAMQHELAQN 184 (414)
Q Consensus 167 ad~ii~vS~~~~~~l~~~ 184 (414)
+|.++...+.+.+.+.+.
T Consensus 119 ~d~vi~p~~~~a~~i~~~ 136 (140)
T 3fwz_A 119 ANQVVMGEREIARTMLEL 136 (140)
T ss_dssp CSEEEEHHHHHHHHHHHH
T ss_pred CCEEECchHHHHHHHHHH
Confidence 899998888887777653
No 71
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=46.85 E-value=42 Score=30.68 Aligned_cols=73 Identities=8% Similarity=-0.134 Sum_probs=44.1
Q ss_pred EEEEEEcCCC-------ChHHHHHHHHHcCCCcEEEecCCCChhhHHHHHhhccEEEeeccCCC-------CCCCchhHH
Q 015058 317 LLFIITGKGP-------DKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS-------GLDLPMKVC 382 (414)
Q Consensus 317 i~liI~G~G~-------~~e~l~~~i~~l~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~-------g~~lP~kl~ 382 (414)
-++.|+..|. ...++++..+++|.+ +...- ..+|..+.+..||..+++-..+. ..++-..+-
T Consensus 32 ~~i~iI~~a~~~~~~~~~~~~~~~al~~lG~~-~~~v~---~~~d~~~~l~~ad~I~lpGG~~~~~~~~l~~~gl~~~l~ 107 (229)
T 1fy2_A 32 RSAVFIPFAGVTQTWDEYTDKTAEVLAPLGVN-VTGIH---RVADPLAAIEKAEIIIVGGGNTFQLLKESRERGLLAPMA 107 (229)
T ss_dssp CEEEEECTTCCSSCHHHHHHHHHHHHGGGTCE-EEETT---SSSCHHHHHHHCSEEEECCSCHHHHHHHHHHTTCHHHHH
T ss_pred CeEEEEECCCCCCCHHHHHHHHHHHHHHCCCE-EEEEe---ccccHHHHHhcCCEEEECCCcHHHHHHHHHHCChHHHHH
Confidence 3556655442 234456666777764 44432 22566678889998876532111 224556778
Q ss_pred HHHHcCCeEEE
Q 015058 383 YCWYSRYSLKL 393 (414)
Q Consensus 383 Eama~G~Pvi~ 393 (414)
|+...|+|++.
T Consensus 108 ~~~~~G~p~~G 118 (229)
T 1fy2_A 108 DRVKRGALYIG 118 (229)
T ss_dssp HHHHTTCEEEE
T ss_pred HHHHcCCEEEE
Confidence 88889999986
No 72
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=45.21 E-value=46 Score=33.41 Aligned_cols=75 Identities=15% Similarity=0.057 Sum_probs=53.5
Q ss_pred CCcEEEEEEcCCCChHHHHHHHHHcCCCcEEEecCC----CC----------------------hhhHHHHHhhccEEEe
Q 015058 314 YPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMW----LS----------------------AEDYPLLLGSADLGVC 367 (414)
Q Consensus 314 ~p~i~liI~G~G~~~e~l~~~i~~l~l~~V~f~g~~----v~----------------------~ed~~~~l~~aDl~V~ 367 (414)
.++.+++|.|-|.--...-+.+..+|.++|++..-. .. ..++.+.+..||+++.
T Consensus 190 l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~~~~~~L~eav~~ADVlIG 269 (388)
T 1vl6_A 190 IEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITNPERLSGDLETALEGADFFIG 269 (388)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTTCCCSCHHHHHTTCSEEEE
T ss_pred CCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhccCchhhHHHHHccCCEEEE
Confidence 457899999999988777788888898888887522 11 1248899999999996
Q ss_pred eccCCCCCCCchhHHHHHHcCCeEE
Q 015058 368 LHTSSSGLDLPMKVCYCWYSRYSLK 392 (414)
Q Consensus 368 ~~~s~~g~~lP~kl~Eama~G~Pvi 392 (414)
.+. . + -+...+++.|+ .-|||
T Consensus 270 ~Sa-p-~-l~t~emVk~Ma-~~pII 290 (388)
T 1vl6_A 270 VSR-G-N-ILKPEWIKKMS-RKPVI 290 (388)
T ss_dssp CSC-S-S-CSCHHHHTTSC-SSCEE
T ss_pred eCC-C-C-ccCHHHHHhcC-CCCEE
Confidence 532 1 2 25556677776 35655
No 73
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=38.84 E-value=52 Score=29.06 Aligned_cols=128 Identities=13% Similarity=0.101 Sum_probs=67.7
Q ss_pred EEEEeCCCCCChHHH-HHHHHHHhhCCCcEEEEecCCCCCCcccccCCCeEEEEeecCCCCCCCCCCchHHHHHHHHHHH
Q 015058 8 CVVVLGDLGRSPRMQ-YQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLI 86 (414)
Q Consensus 8 ~v~~~~d~~~~~r~~-~~a~~La~~~g~eV~vv~~~~~~~~~~~~~~~~i~i~~v~~~~~~~~~~~~~~~~~~~l~k~l~ 86 (414)
+|++.| . +++- ..+..|.++ |++|.++...+.. .....+..++.++.-. .. .. ..+.
T Consensus 2 ~iiIiG-~---G~~G~~la~~L~~~-g~~v~vid~~~~~-~~~l~~~~~~~~i~gd--~~-------~~-------~~l~ 59 (218)
T 3l4b_C 2 KVIIIG-G---ETTAYYLARSMLSR-KYGVVIINKDREL-CEEFAKKLKATIIHGD--GS-------HK-------EILR 59 (218)
T ss_dssp CEEEEC-C---HHHHHHHHHHHHHT-TCCEEEEESCHHH-HHHHHHHSSSEEEESC--TT-------SH-------HHHH
T ss_pred EEEEEC-C---CHHHHHHHHHHHhC-CCeEEEEECCHHH-HHHHHHHcCCeEEEcC--CC-------CH-------HHHH
Confidence 466666 3 3443 456788886 9999999865432 1112223455554433 11 11 1111
Q ss_pred HHHHHHHHHhhhcCCCcEEEEeCCCCchHHHHHHHHHhhcCCeEEE-EEcCcchhhhhhccCCCcHHHHHHHHHHHHHhc
Q 015058 87 QFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIV-DWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGK 165 (414)
Q Consensus 87 ~~~~l~~~l~~k~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~Iv-~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k 165 (414)
+. ...+.|++++..+.......++..++...+.+.|+ ..++..+ ...+ + .-
T Consensus 60 ~a---------~i~~ad~vi~~~~~d~~n~~~~~~a~~~~~~~~iia~~~~~~~-------------~~~l---~---~~ 111 (218)
T 3l4b_C 60 DA---------EVSKNDVVVILTPRDEVNLFIAQLVMKDFGVKRVVSLVNDPGN-------------MEIF---K---KM 111 (218)
T ss_dssp HH---------TCCTTCEEEECCSCHHHHHHHHHHHHHTSCCCEEEECCCSGGG-------------HHHH---H---HH
T ss_pred hc---------CcccCCEEEEecCCcHHHHHHHHHHHHHcCCCeEEEEEeCcch-------------HHHH---H---HC
Confidence 10 23689999888764333444555555555555444 3333211 0111 1 12
Q ss_pred cCCEEEEeCHHHHHHHHHhh
Q 015058 166 MANGCLCVTQAMQHELAQNW 185 (414)
Q Consensus 166 ~ad~ii~vS~~~~~~l~~~~ 185 (414)
.+|.+++..+...+.+.+..
T Consensus 112 G~d~vi~p~~~~~~~l~~~~ 131 (218)
T 3l4b_C 112 GITTVLNLTTLITNTVEALI 131 (218)
T ss_dssp TCEECCCHHHHHHHHHHHHH
T ss_pred CCCEEECHHHHHHHHHHHHh
Confidence 57888888887777777653
No 74
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=37.18 E-value=44 Score=30.89 Aligned_cols=73 Identities=14% Similarity=0.107 Sum_probs=48.6
Q ss_pred HHHHHHHHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHH--HHHcCCeEEEeeeCCcccchhh
Q 015058 329 ESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCY--CWYSRYSLKLLWTCSVVGCLFV 405 (414)
Q Consensus 329 e~l~~~i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~E--ama~G~Pvi~s~~~~~~~~~~~ 405 (414)
+.+.+.+++++-. +|......+..+++..++..+|+.|....+.. ....+. |...|+|.|...+.|..|-+++
T Consensus 85 ~~~~~~l~~~np~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~d~~~----~r~~l~~~~~~~~~p~i~~~~~g~~G~v~~ 160 (251)
T 1zud_1 85 QVSQQRLTQLNPDIQLTALQQRLTGEALKDAVARADVVLDCTDNMA----TRQEINAACVALNTPLITASAVGFGGQLMV 160 (251)
T ss_dssp HHHHHHHHHHCTTSEEEEECSCCCHHHHHHHHHHCSEEEECCSSHH----HHHHHHHHHHHTTCCEEEEEEEBTEEEEEE
T ss_pred HHHHHHHHHHCCCCEEEEEeccCCHHHHHHHHhcCCEEEECCCCHH----HHHHHHHHHHHhCCCEEEEeccccceEEEE
Confidence 5666677777655 67766556778889999999999984322111 111222 3457999999888877776543
No 75
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=37.12 E-value=61 Score=30.14 Aligned_cols=72 Identities=13% Similarity=0.025 Sum_probs=41.3
Q ss_pred EEEEEc-CCCChHHHHHHHHHc-CCCcEEEecCCCChhhHHHHHh-hccEEE-eeccCCCCCCCchhHHHHHHcCCeEEE
Q 015058 318 LFIITG-KGPDKESYEEKIRRL-RLKRVAFRTMWLSAEDYPLLLG-SADLGV-CLHTSSSGLDLPMKVCYCWYSRYSLKL 393 (414)
Q Consensus 318 ~liI~G-~G~~~e~l~~~i~~l-~l~~V~f~g~~v~~ed~~~~l~-~aDl~V-~~~~s~~g~~lP~kl~Eama~G~Pvi~ 393 (414)
++.|+| .|.--..+.+.+.+. +.+=|.... ..+++..++. .+|+.| +.+ + .....-+-.|...|+|+|.
T Consensus 2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d---~~~dl~~~~~~~~DvvIDfT~--p--~a~~~~~~~a~~~g~~~Vi 74 (245)
T 1p9l_A 2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELD---AGDPLSLLTDGNTEVVIDFTH--P--DVVMGNLEFLIDNGIHAVV 74 (245)
T ss_dssp EEEEETTTSHHHHHHHHHHHHCTTCEEEEEEC---TTCCTHHHHHTTCCEEEECSC--T--TTHHHHHHHHHHTTCEEEE
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEc---cCCCHHHHhccCCcEEEEccC--h--HHHHHHHHHHHHcCCCEEE
Confidence 577888 487766676666543 443233332 3456666665 788877 321 1 1222234455778888877
Q ss_pred eee
Q 015058 394 LWT 396 (414)
Q Consensus 394 s~~ 396 (414)
..|
T Consensus 75 gTT 77 (245)
T 1p9l_A 75 GTT 77 (245)
T ss_dssp CCC
T ss_pred cCC
Confidence 655
No 76
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=34.03 E-value=54 Score=29.97 Aligned_cols=40 Identities=18% Similarity=0.125 Sum_probs=29.4
Q ss_pred CCCCCEEEEEEeCCCCCChHHHHHHHHHHhhCCCcEEEEecC
Q 015058 1 MGRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYG 42 (414)
Q Consensus 1 ~~~~~~~~v~~~~d~~~~~r~~~~a~~La~~~g~eV~vv~~~ 42 (414)
|++++++.+-+.|..+ .--....++.|.+. |++|+|+...
T Consensus 1 m~~~k~IllgvTGaia-a~k~~~ll~~L~~~-g~eV~vv~T~ 40 (209)
T 3zqu_A 1 MSGPERITLAMTGASG-AQYGLRLLDCLVQE-EREVHFLISK 40 (209)
T ss_dssp CCSCSEEEEEECSSSC-HHHHHHHHHHHHHT-TCEEEEEECH
T ss_pred CCCCCEEEEEEECHHH-HHHHHHHHHHHHHC-CCEEEEEECc
Confidence 8999999888888642 22333456777775 9999999754
No 77
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=33.74 E-value=35 Score=32.35 Aligned_cols=77 Identities=12% Similarity=0.001 Sum_probs=47.8
Q ss_pred cEEEEEEc-CCCChHHHHHHHHHcCCCcEEEecC--CC--------------------ChhhHHHHHhhccEEEeeccCC
Q 015058 316 RLLFIITG-KGPDKESYEEKIRRLRLKRVAFRTM--WL--------------------SAEDYPLLLGSADLGVCLHTSS 372 (414)
Q Consensus 316 ~i~liI~G-~G~~~e~l~~~i~~l~l~~V~f~g~--~v--------------------~~ed~~~~l~~aDl~V~~~~s~ 372 (414)
.+++.|+| .|.--..+.+.+.+.. ++.+.+. .- ..+|+..++..+|+.|-.. ++
T Consensus 7 mikV~V~Ga~G~MG~~i~~~l~~~~--~~eLv~~~d~~~~~~~G~d~gel~g~~~gv~v~~dl~~ll~~~DVVIDfT-~p 83 (272)
T 4f3y_A 7 SMKIAIAGASGRMGRMLIEAVLAAP--DATLVGALDRTGSPQLGQDAGAFLGKQTGVALTDDIERVCAEADYLIDFT-LP 83 (272)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHHCT--TEEEEEEBCCTTCTTTTSBTTTTTTCCCSCBCBCCHHHHHHHCSEEEECS-CH
T ss_pred ccEEEEECCCCHHHHHHHHHHHhCC--CCEEEEEEEecCcccccccHHHHhCCCCCceecCCHHHHhcCCCEEEEcC-CH
Confidence 47899999 8887777777666532 3333321 10 1267888899999988321 11
Q ss_pred CCCCCchhHHHHHHcCCeEEEeeeC
Q 015058 373 SGLDLPMKVCYCWYSRYSLKLLWTC 397 (414)
Q Consensus 373 ~g~~lP~kl~Eama~G~Pvi~s~~~ 397 (414)
.....-+..|+..|+|+|...|+
T Consensus 84 --~a~~~~~~~al~~G~~vVigTTG 106 (272)
T 4f3y_A 84 --EGTLVHLDAALRHDVKLVIGTTG 106 (272)
T ss_dssp --HHHHHHHHHHHHHTCEEEECCCC
T ss_pred --HHHHHHHHHHHHcCCCEEEECCC
Confidence 11223455678999999986543
No 78
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=32.49 E-value=44 Score=31.77 Aligned_cols=38 Identities=29% Similarity=0.219 Sum_probs=31.1
Q ss_pred CCEEEEEEeCCCC-CChHHHHHHHHHHhhCCCcEEEEecCC
Q 015058 4 RGRACVVVLGDLG-RSPRMQYQALSLARQMSLEVDVVAYGG 43 (414)
Q Consensus 4 ~~~~~v~~~~d~~-~~~r~~~~a~~La~~~g~eV~vv~~~~ 43 (414)
.+.|.|++..|=| .++++...++.|.+ +++|.|+++..
T Consensus 9 ~~~m~ILlTNDDGi~apGi~aL~~~l~~--~~~V~VVAP~~ 47 (261)
T 3ty2_A 9 TPKLRLLLSNDDGVYAKGLAILAKTLAD--LGEVDVVAPDR 47 (261)
T ss_dssp --CCEEEEECSSCTTCHHHHHHHHHHTT--TSEEEEEEESS
T ss_pred CCCCeEEEEcCCCCCCHHHHHHHHHHHh--cCCEEEEecCC
Confidence 4558999999888 69999998888865 78999999874
No 79
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=31.00 E-value=1.9e+02 Score=23.71 Aligned_cols=33 Identities=24% Similarity=0.221 Sum_probs=21.8
Q ss_pred EEEEEeCCCCCChHHHHHHHHHHhhCCCcEEEEecCC
Q 015058 7 ACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGG 43 (414)
Q Consensus 7 ~~v~~~~d~~~~~r~~~~a~~La~~~g~eV~vv~~~~ 43 (414)
..|++.| .|.-++ ..+..|.+. |++|.++...+
T Consensus 20 ~~v~IiG-~G~iG~--~la~~L~~~-g~~V~vid~~~ 52 (155)
T 2g1u_A 20 KYIVIFG-CGRLGS--LIANLASSS-GHSVVVVDKNE 52 (155)
T ss_dssp CEEEEEC-CSHHHH--HHHHHHHHT-TCEEEEEESCG
T ss_pred CcEEEEC-CCHHHH--HHHHHHHhC-CCeEEEEECCH
Confidence 5667777 343333 346777775 99999988654
No 80
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=30.52 E-value=62 Score=29.74 Aligned_cols=74 Identities=15% Similarity=0.154 Sum_probs=45.3
Q ss_pred HHHHHHHHHcCCC-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHH-HHHcCCeEEEeeeCCcccchhh
Q 015058 329 ESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCY-CWYSRYSLKLLWTCSVVGCLFV 405 (414)
Q Consensus 329 e~l~~~i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~E-ama~G~Pvi~s~~~~~~~~~~~ 405 (414)
+.+.+.+++++-. +|......+..+++..+++.+|+.|....+. .. -..+.+ |...|+|+|...+.|..|-+++
T Consensus 88 ~~~~~~l~~~np~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~d~~--~~-~~~l~~~~~~~~~p~i~~~~~g~~g~v~~ 163 (249)
T 1jw9_B 88 ESARDALTRINPHIAITPVNALLDDAELAALIAEHDLVLDCTDNV--AV-RNQLNAGCFAAKVPLVSGAAIRMEGQITV 163 (249)
T ss_dssp HHHHHHHHHHCTTSEEEEECSCCCHHHHHHHHHTSSEEEECCSSH--HH-HHHHHHHHHHHTCCEEEEEEEBTEEEEEE
T ss_pred HHHHHHHHHHCCCcEEEEEeccCCHhHHHHHHhCCCEEEEeCCCH--HH-HHHHHHHHHHcCCCEEEeeeccceEEEEE
Confidence 4455556665544 6666544667778888999999998532111 00 011222 3457999999887776665543
No 81
>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=30.25 E-value=2.2e+02 Score=27.42 Aligned_cols=86 Identities=14% Similarity=0.166 Sum_probs=45.3
Q ss_pred EEEEeCCCCchHHHHHHHHHhhcCCeEEE-EEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEE--EeCHHHHHH
Q 015058 104 VFLVQNPPSVPTLVAVKWASSLRRSAFIV-DWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCL--CVTQAMQHE 180 (414)
Q Consensus 104 vvh~~~pp~~~~~~~~~la~~~~~~~~Iv-~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii--~vS~~~~~~ 180 (414)
+.....-||.-+=..--.+.+.+|..++. +..+. +.++.-.+.-..+ .+.+++|.|+ .-.+...+.
T Consensus 48 la~lF~e~STRTR~SFE~A~~~LGg~~i~l~~~~s-------s~~kgEsl~DTar----vls~~~D~iviR~~~~~~~~~ 116 (309)
T 4f2g_A 48 LAMIFEKSSTRTRLSFEAGIFQLGGHAVFMSTRDT-------QLGRGEPVEDSAQ----VISRMVDIIMIRTFEQDIIQR 116 (309)
T ss_dssp EEEEESSCCHHHHHHHHHHHHHTTCEEEEECCSSC-------EETBEECHHHHHH----HHHHHCSEEEEECSCHHHHHH
T ss_pred EEEEecCCChhhHhhHHHHHHHcCCeEEEcCcccc-------cCCCCCCHHHHHH----HHHHhCCEEEEecCCHHHHHH
Confidence 44455555666654434445556666554 32221 1233222222233 3345689877 456677788
Q ss_pred HHHhhCCcEEEecCCCCCCcCCC
Q 015058 181 LAQNWGIKATVLYDQPPEFFHPT 203 (414)
Q Consensus 181 l~~~~gi~i~vI~n~~~~~f~p~ 203 (414)
+++.-+++ || |+-.+.+||+
T Consensus 117 lA~~~~vP--VI-Nag~~~~HPt 136 (309)
T 4f2g_A 117 FAENSRVP--VI-NGLTNEYHPC 136 (309)
T ss_dssp HHHTCSSC--EE-EEECSSCCHH
T ss_pred HHHhCCCC--EE-ECCCCccCcH
Confidence 88765555 34 4424678887
No 82
>4h31_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PE5; 1.70A {Vibrio vulnificus} PDB: 3upd_A*
Probab=27.74 E-value=3e+02 Score=26.99 Aligned_cols=87 Identities=22% Similarity=0.264 Sum_probs=48.1
Q ss_pred EEEEeCCCCchHHHHHHHHHhhcCCeEEE-EEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEe--CHHHHHH
Q 015058 104 VFLVQNPPSVPTLVAVKWASSLRRSAFIV-DWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCV--TQAMQHE 180 (414)
Q Consensus 104 vvh~~~pp~~~~~~~~~la~~~~~~~~Iv-~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~v--S~~~~~~ 180 (414)
+.....-||.-+=..--.|.+.+|..++. +..+. ++++.-.+.-..+ .+..++|.|+.= ++...+.
T Consensus 73 la~lF~epSTRTR~SFE~A~~~LGg~vi~l~~~~s-------s~~kgEsl~DTar----vLs~~~D~IviR~~~~~~~~~ 141 (358)
T 4h31_A 73 IALIFEKASTRTRCAFEVAAFDQGAQVTYIGPSGS-------QIGDKESMKDTAR----VLGRMYDGIQYRGFGQAIVEE 141 (358)
T ss_dssp EEEEESSCCSHHHHHHHHHHHHTTCEEEEECSSSS-------CBTTTBCHHHHHH----HHHHHCSEEEEECSCHHHHHH
T ss_pred EEEEeCCCChhhHHHHHHHHHHcCCeEEECCcccc-------cccCccchhHHHH----HhhccCceeEecccchhHHHH
Confidence 44455545666655444455566766653 22221 1333222333333 334557877654 6677777
Q ss_pred HHHhhCCcEEEecCCCCCCcCCCC
Q 015058 181 LAQNWGIKATVLYDQPPEFFHPTS 204 (414)
Q Consensus 181 l~~~~gi~i~vI~n~~~~~f~p~~ 204 (414)
+++.-+++ |.||+.+..||+.
T Consensus 142 la~~s~vP---VING~g~~~HPtQ 162 (358)
T 4h31_A 142 LGAFAGVP---VWNGLTDEFHPTQ 162 (358)
T ss_dssp HHHHSSSC---EEESCCSSCCHHH
T ss_pred hhhhccCc---eECCCCcCCCchH
Confidence 87765555 3369888899973
No 83
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=27.60 E-value=43 Score=32.11 Aligned_cols=77 Identities=12% Similarity=0.063 Sum_probs=47.7
Q ss_pred cEEEEEEc-CCCChHHHHHHHHHcCCCcEEEecCCCC-----------------------hhhHHHHHhhccEEEeeccC
Q 015058 316 RLLFIITG-KGPDKESYEEKIRRLRLKRVAFRTMWLS-----------------------AEDYPLLLGSADLGVCLHTS 371 (414)
Q Consensus 316 ~i~liI~G-~G~~~e~l~~~i~~l~l~~V~f~g~~v~-----------------------~ed~~~~l~~aDl~V~~~~s 371 (414)
.+++.|+| .|.--..+.+.+.+. .++.+.|.... .+|+..++..+|+.|-.+ +
T Consensus 21 ~irV~V~Ga~GrMGr~i~~~v~~~--~~~eLvg~vd~~~~~~~G~d~gel~G~~~~gv~v~~dl~~ll~~aDVvIDFT-~ 97 (288)
T 3ijp_A 21 SMRLTVVGANGRMGRELITAIQRR--KDVELCAVLVRKGSSFVDKDASILIGSDFLGVRITDDPESAFSNTEGILDFS-Q 97 (288)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTC--SSEEEEEEBCCTTCTTTTSBGGGGTTCSCCSCBCBSCHHHHTTSCSEEEECS-C
T ss_pred CeEEEEECCCCHHHHHHHHHHHhC--CCCEEEEEEecCCccccccchHHhhccCcCCceeeCCHHHHhcCCCEEEEcC-C
Confidence 38999999 898777777766543 23444431111 137888899999988211 1
Q ss_pred CCCCCCchhHHHHHHcCCeEEEeeeC
Q 015058 372 SSGLDLPMKVCYCWYSRYSLKLLWTC 397 (414)
Q Consensus 372 ~~g~~lP~kl~Eama~G~Pvi~s~~~ 397 (414)
+ .....-+..|...|+|+|...|+
T Consensus 98 p--~a~~~~~~~~l~~Gv~vViGTTG 121 (288)
T 3ijp_A 98 P--QASVLYANYAAQKSLIHIIGTTG 121 (288)
T ss_dssp H--HHHHHHHHHHHHHTCEEEECCCC
T ss_pred H--HHHHHHHHHHHHcCCCEEEECCC
Confidence 1 11122345678899999986653
No 84
>1vi6_A 30S ribosomal protein S2P; structural genomics, ribosome; 1.95A {Archaeoglobus fulgidus} SCOP: c.23.15.1 PDB: 1vi5_A
Probab=26.89 E-value=66 Score=29.54 Aligned_cols=73 Identities=5% Similarity=-0.103 Sum_probs=45.4
Q ss_pred EEEEEEcCCCC-hHHHHHHHHHcCCCcE--EEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEE
Q 015058 317 LLFIITGKGPD-KESYEEKIRRLRLKRV--AFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKL 393 (414)
Q Consensus 317 i~liI~G~G~~-~e~l~~~i~~l~l~~V--~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~ 393 (414)
-+++++|.-+. ++.+++.+++-|-..| .|+||.+..-.+. -+..-|+.++... ..+ -..+-||-..|+|+|+
T Consensus 69 ~~iLfVgTk~~~~~~V~~~A~~~g~~~v~~rwlgG~LTN~~~~-~f~~PdlliV~Dp--~~e--~~ai~EA~~l~IPvIa 143 (208)
T 1vi6_A 69 SKILLVAARQYAHKPVQMFSKVVGSDYIVGRFIPGTLTNPMLS-EYREPEVVFVNDP--AID--KQAVSEATAVGIPVVA 143 (208)
T ss_dssp GGEEEEECSGGGHHHHHHHHHHHCCEEEESSCCTTTTTCTTST-TCCCCSEEEESCT--TTT--HHHHHHHHHTTCCEEE
T ss_pred CEEEEEeCCHHHHHHHHHHHHHhCCeeecCEECCCcccChhhH-hhCCCCEEEEECC--Ccc--hhHHHHHHHhCCCEEE
Confidence 35677876544 4566677777776555 3666544433322 2445777665432 222 4579999999999998
Q ss_pred e
Q 015058 394 L 394 (414)
Q Consensus 394 s 394 (414)
.
T Consensus 144 l 144 (208)
T 1vi6_A 144 L 144 (208)
T ss_dssp E
T ss_pred E
Confidence 4
No 85
>1i1q_B Anthranilate synthase component II; tryptophan biosynthesis, lyase; HET: TRP; 1.90A {Salmonella typhimurium} SCOP: c.23.16.1 PDB: 1i7q_B 1i7s_B*
Probab=26.86 E-value=2.1e+02 Score=24.66 Aligned_cols=69 Identities=9% Similarity=-0.057 Sum_probs=41.5
Q ss_pred CCCChHHHHHHHHHcCCCcEEEecCCCChhhHHHHHhhcc---EEEeeccCC-CCCCCchhHHHHHHcCCeEEE
Q 015058 324 KGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSAD---LGVCLHTSS-SGLDLPMKVCYCWYSRYSLKL 393 (414)
Q Consensus 324 ~G~~~e~l~~~i~~l~l~~V~f~g~~v~~ed~~~~l~~aD---l~V~~~~s~-~g~~lP~kl~Eama~G~Pvi~ 393 (414)
.|.....+.+.++++|.. +.......+.+++...+...| +.+++...+ ...++-..+++++..|+|++.
T Consensus 9 ~~s~~~~i~~~l~~~G~~-~~v~~~~~~~~~i~~~l~~~~~~~iil~gGpg~~~~~~~~~~l~~~~~~~~PilG 81 (192)
T 1i1q_B 9 IDSFTWNLADQLRTNGHN-VVIYRNHIPAQTLIDRLATMKNPVLMLSPGPGVPSEAGCMPELLTRLRGKLPIIG 81 (192)
T ss_dssp SCSSHHHHHHHHHHTTCE-EEEEETTSCSHHHHHHHTTCSSEEEEECCCSSCGGGSTTHHHHHHHHBTTBCEEE
T ss_pred CccHHHHHHHHHHHCCCe-EEEEECCCCHHHHHHHhhhccCCeEEECCCCcCchhCchHHHHHHHHhcCCCEEE
Confidence 345667788889998876 333321234467766665444 555442111 122344567888888999996
No 86
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=26.57 E-value=91 Score=29.38 Aligned_cols=59 Identities=15% Similarity=0.137 Sum_probs=34.2
Q ss_pred CCCCCEEEEEEeCCCCCChHHHHHHHHHHhhCCCcEEEEecCCCCCCcccccCCCeEEEEee
Q 015058 1 MGRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMT 62 (414)
Q Consensus 1 ~~~~~~~~v~~~~d~~~~~r~~~~a~~La~~~g~eV~vv~~~~~~~~~~~~~~~~i~i~~v~ 62 (414)
|+++.-+.|++.|.-|.-++ ..+..|.++.||+|.++...... .......++++++...
T Consensus 19 ~~~m~~~~vlVtGatG~iG~--~l~~~L~~~~g~~V~~~~r~~~~-~~~~~~~~~v~~~~~D 77 (372)
T 3slg_A 19 PGSMKAKKVLILGVNGFIGH--HLSKRILETTDWEVFGMDMQTDR-LGDLVKHERMHFFEGD 77 (372)
T ss_dssp ----CCCEEEEESCSSHHHH--HHHHHHHHHSSCEEEEEESCCTT-TGGGGGSTTEEEEECC
T ss_pred CcccCCCEEEEECCCChHHH--HHHHHHHhCCCCEEEEEeCChhh-hhhhccCCCeEEEeCc
Confidence 44444567788875443332 34667777338999999876543 2333345778877654
No 87
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=26.23 E-value=2.6e+02 Score=26.25 Aligned_cols=77 Identities=6% Similarity=0.018 Sum_probs=47.9
Q ss_pred EEEEEEcCCCCh--HHHHHHHHHcCCCcEEEecCCCChhhHHHHHhhccEEEee-c-cCCCCC--CCchhHHHHHH----
Q 015058 317 LLFIITGKGPDK--ESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCL-H-TSSSGL--DLPMKVCYCWY---- 386 (414)
Q Consensus 317 i~liI~G~G~~~--e~l~~~i~~l~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~-~-~s~~g~--~lP~kl~Eama---- 386 (414)
+.-+|+.|-|.+ +++.+.+++.|++.|.+..+--+.+.+..+.+.++=||.. + ....|. ++|..+.|.+.
T Consensus 124 vdgvii~Dlp~ee~~~~~~~~~~~gl~~i~liaP~t~~eri~~i~~~~~gfvY~vS~~GvTG~~~~~~~~~~~~v~~vr~ 203 (267)
T 3vnd_A 124 VDSVLIADVPVEESAPFSKAAKAHGIAPIFIAPPNADADTLKMVSEQGEGYTYLLSRAGVTGTESKAGEPIENILTQLAE 203 (267)
T ss_dssp CCEEEETTSCGGGCHHHHHHHHHTTCEEECEECTTCCHHHHHHHHHHCCSCEEESCCCCCC--------CHHHHHHHHHT
T ss_pred CCEEEeCCCCHhhHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHhCCCcEEEEecCCCCCCccCCcHHHHHHHHHHHH
Confidence 455677777643 4788899999998777776455678999999999866532 1 111121 24544444443
Q ss_pred -cCCeEEE
Q 015058 387 -SRYSLKL 393 (414)
Q Consensus 387 -~G~Pvi~ 393 (414)
..+||++
T Consensus 204 ~~~~pv~v 211 (267)
T 3vnd_A 204 FNAPPPLL 211 (267)
T ss_dssp TTCCCEEE
T ss_pred hcCCCEEE
Confidence 4788886
No 88
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=26.08 E-value=2.8e+02 Score=26.66 Aligned_cols=116 Identities=16% Similarity=0.133 Sum_probs=0.0
Q ss_pred HHHhccCCEEEE--eCHHHHHHHHHhhCCcEEEecCCCCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCC
Q 015058 161 KYYGKMANGCLC--VTQAMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKA 238 (414)
Q Consensus 161 k~~~k~ad~ii~--vS~~~~~~l~~~~gi~i~vI~n~~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 238 (414)
+.+.+++|.|+. -.+...+.+++.-+++ ||.-++ ..+||+
T Consensus 86 rvls~~~D~iviR~~~~~~~~~lA~~~~vP--VINag~-~~~HPt----------------------------------- 127 (307)
T 3tpf_A 86 RVIGAMVDFVMMRVNKHETLLEFARYSKAP--VINALS-ELYHPT----------------------------------- 127 (307)
T ss_dssp HHHHHHSSEEEEECSCHHHHHHHHHHCSSC--EEEEEC-SSCCHH-----------------------------------
T ss_pred HHHHHhCCEEEEecCChHHHHHHHHhCCCC--EEeCCC-CCcCcH-----------------------------------
Q ss_pred ccceeeeccccccccCCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCC-cE
Q 015058 239 DETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYP-RL 317 (414)
Q Consensus 239 ~~~~~~~~~~~~~~l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~i 317 (414)
..|++.+-+..+.. ... ++
T Consensus 128 -----------------------------------QaLaDl~Ti~e~~g-------------------------~l~~gl 147 (307)
T 3tpf_A 128 -----------------------------------QVLGDLFTIKEWNK-------------------------MQNGIA 147 (307)
T ss_dssp -----------------------------------HHHHHHHHHHHTTC-------------------------CGGGCC
T ss_pred -----------------------------------HHHHHHHHHHHHhC-------------------------CCCCCC
Q ss_pred EEEEEcCCCChH-HHHHHHHHcCCC-cEEEecCCCChhhH---------------------HHHHhhccEEEeeccCCCC
Q 015058 318 LFIITGKGPDKE-SYEEKIRRLRLK-RVAFRTMWLSAEDY---------------------PLLLGSADLGVCLHTSSSG 374 (414)
Q Consensus 318 ~liI~G~G~~~e-~l~~~i~~l~l~-~V~f~g~~v~~ed~---------------------~~~l~~aDl~V~~~~s~~g 374 (414)
++.++|||..-- ++......+|.+ ++.-..++.+.+++ .+.+..||+.....+.+.+
T Consensus 148 ~va~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~d~~eav~~aDvvyt~~w~smg 227 (307)
T 3tpf_A 148 KVAFIGDSNNMCNSWLITAAILGFEISIAMPKNYKISPEIWEFAMKQALISGAKISLGYDKFEALKDKDVVITDTWVSMG 227 (307)
T ss_dssp EEEEESCSSHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHHTTCSEEEECCSSCTT
T ss_pred EEEEEcCCCccHHHHHHHHHHcCCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEEecCcccCC
No 89
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=25.85 E-value=3.2e+02 Score=26.25 Aligned_cols=110 Identities=20% Similarity=0.233 Sum_probs=0.0
Q ss_pred HHHhcc-CCEEEEeCH--HHHHHHHHhhCCcEEEecCCCCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCC
Q 015058 161 KYYGKM-ANGCLCVTQ--AMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQK 237 (414)
Q Consensus 161 k~~~k~-ad~ii~vS~--~~~~~l~~~~gi~i~vI~n~~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 237 (414)
+.+.++ +|.|+.=.. ...+.+++.-+++ ||.-++.+.+||+
T Consensus 86 rvLs~~~~D~iviR~~~~~~~~~la~~~~vP--VINagdg~~~HPt---------------------------------- 129 (304)
T 3r7f_A 86 RTLESIGVDVCVIRHSEDEYYEELVSQVNIP--ILNAGDGCGQHPT---------------------------------- 129 (304)
T ss_dssp HHHHHHTCCEEEEECSSTTCHHHHHHHCSSC--EEESCCTTSCCHH----------------------------------
T ss_pred HHHHHhcCCEEEEecCChhHHHHHHHhCCCC--EEeCCCCCCcCcH----------------------------------
Q ss_pred CccceeeeccccccccCCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcE
Q 015058 238 ADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRL 317 (414)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i 317 (414)
..|++.+-+..+.. ...++
T Consensus 130 ------------------------------------QaLaDl~Ti~e~~g-------------------------~l~gl 148 (304)
T 3r7f_A 130 ------------------------------------QSLLDLMTIYEEFN-------------------------TFKGL 148 (304)
T ss_dssp ------------------------------------HHHHHHHHHHHHHS-------------------------CCTTC
T ss_pred ------------------------------------HHHHHHHHHHHHhC-------------------------CCCCC
Q ss_pred EEEEEcCCCC---hHHHHHHHHHcCCC-cEEEecCCCChh-------hHHHHHhhccEEEe
Q 015058 318 LFIITGKGPD---KESYEEKIRRLRLK-RVAFRTMWLSAE-------DYPLLLGSADLGVC 367 (414)
Q Consensus 318 ~liI~G~G~~---~e~l~~~i~~l~l~-~V~f~g~~v~~e-------d~~~~l~~aDl~V~ 367 (414)
++.++|||.. -.++......+|.+ ++.-..++.+.. |+.+.+..||+...
T Consensus 149 kva~vGD~~~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~g~~~d~~eav~~aDvvyt 209 (304)
T 3r7f_A 149 TVSIHGDIKHSRVARSNAEVLTRLGARVLFSGPSEWQDEENTFGTYVSMDEAVESSDVVML 209 (304)
T ss_dssp EEEEESCCTTCHHHHHHHHHHHHTTCEEEEESCGGGSCTTCSSCEECCHHHHHHHCSEEEE
T ss_pred EEEEEcCCCCcchHHHHHHHHHHcCCEEEEECCCccCcchhhcCccCCHHHHhCCCCEEEe
No 90
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=25.85 E-value=53 Score=28.80 Aligned_cols=42 Identities=12% Similarity=0.009 Sum_probs=29.2
Q ss_pred CCCCCEEEEEEeCCCCCChHHHHHHHHHHhhCCCcEEEEecCC
Q 015058 1 MGRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGG 43 (414)
Q Consensus 1 ~~~~~~~~v~~~~d~~~~~r~~~~a~~La~~~g~eV~vv~~~~ 43 (414)
|++.+++.++..+|-...-....-..-|.+. |++|++++...
T Consensus 4 m~~t~~~v~il~~~gFe~~E~~~p~~~l~~a-g~~V~~~s~~~ 45 (177)
T 4hcj_A 4 MGKTNNILYVMSGQNFQDEEYFESKKIFESA-GYKTKVSSTFI 45 (177)
T ss_dssp -CCCCEEEEECCSEEECHHHHHHHHHHHHHT-TCEEEEEESSS
T ss_pred cccCCCEEEEECCCCccHHHHHHHHHHHHHC-CCEEEEEECCC
Confidence 8888877777666533444555566777775 99999999664
No 91
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=25.62 E-value=4.3e+02 Score=25.56 Aligned_cols=116 Identities=16% Similarity=0.127 Sum_probs=0.0
Q ss_pred HHHhccCCEEEEe--CHHHHHHHHHhhCCcEEEecCCCCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCC
Q 015058 161 KYYGKMANGCLCV--TQAMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKA 238 (414)
Q Consensus 161 k~~~k~ad~ii~v--S~~~~~~l~~~~gi~i~vI~n~~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 238 (414)
+.+.+++|.|+.= ++...+.+++.-++++. |+....+||+
T Consensus 108 rvLs~~~D~iviR~~~~~~~~~lA~~~~vPVI---Na~~~~~HPt----------------------------------- 149 (325)
T 1vlv_A 108 RVLGRMVDAIMFRGYKQETVEKLAEYSGVPVY---NGLTDEFHPT----------------------------------- 149 (325)
T ss_dssp HHHHTTCSEEEEESSCHHHHHHHHHHHCSCEE---ESCCSSCCHH-----------------------------------
T ss_pred HHHHHhCCEEEEECCChHHHHHHHHhCCCCEE---eCCCCCCCcH-----------------------------------
Q ss_pred ccceeeeccccccccCCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEE
Q 015058 239 DETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLL 318 (414)
Q Consensus 239 ~~~~~~~~~~~~~~l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~ 318 (414)
..|++.+-+..+.. ...+++
T Consensus 150 -----------------------------------QaLaDl~Ti~e~~g-------------------------~l~gl~ 169 (325)
T 1vlv_A 150 -----------------------------------QALADLMTIEENFG-------------------------RLKGVK 169 (325)
T ss_dssp -----------------------------------HHHHHHHHHHHHHS-------------------------CSTTCE
T ss_pred -----------------------------------HHHHHHHHHHHHhC-------------------------CcCCcE
Q ss_pred EEEEcCC--CChHHHHHHHHHcCCC-cEEEecCCCChhhHH---------------------HHHhhccEEEeeccCCCC
Q 015058 319 FIITGKG--PDKESYEEKIRRLRLK-RVAFRTMWLSAEDYP---------------------LLLGSADLGVCLHTSSSG 374 (414)
Q Consensus 319 liI~G~G--~~~e~l~~~i~~l~l~-~V~f~g~~v~~ed~~---------------------~~l~~aDl~V~~~~s~~g 374 (414)
+.++||| .--.++......+|.+ ++.-..++.+.+++. +.+..||+.......+.|
T Consensus 170 va~vGD~~~rva~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvyt~~w~smg 249 (325)
T 1vlv_A 170 VVFMGDTRNNVATSLMIACAKMGMNFVACGPEELKPRSDVFKRCQEIVKETDGSVSFTSNLEEALAGADVVYTDVWASMG 249 (325)
T ss_dssp EEEESCTTSHHHHHHHHHHHHTTCEEEEESCGGGCCCHHHHHHHHHHHHHHCCEEEEESCHHHHHTTCSEEEECCCC---
T ss_pred EEEECCCCcCcHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEcCHHHHHccCCEEEeccccccc
No 92
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=25.21 E-value=88 Score=29.18 Aligned_cols=55 Identities=16% Similarity=0.097 Sum_probs=27.2
Q ss_pred EEEEEEeCCCCCChHHHHHHHHHHhh-CCCcEEEEecCCCCCCcccccCCCe-EEEEee
Q 015058 6 RACVVVLGDLGRSPRMQYQALSLARQ-MSLEVDVVAYGGSKPHAAILEHPSI-HIHTMT 62 (414)
Q Consensus 6 ~~~v~~~~d~~~~~r~~~~a~~La~~-~g~eV~vv~~~~~~~~~~~~~~~~i-~i~~v~ 62 (414)
++.|+..+.+|..--..-....|.++ -+.++++++..... .-....+.+ +++.++
T Consensus 2 kILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~--~l~~~~p~i~~v~~~~ 58 (348)
T 1psw_A 2 KILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCR--PLLSRMPEVNEAIPMP 58 (348)
T ss_dssp EEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGH--HHHTTCTTEEEEEEC-
T ss_pred eEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchh--HHHhcCCccCEEEEec
Confidence 44455444332222333444566553 47899999965321 122234566 465554
No 93
>1ygp_A Yeast glycogen phosphorylase; phosphorylated form, glycosyltransferase; HET: PLP; 2.80A {Saccharomyces cerevisiae} SCOP: c.87.1.4
Probab=25.09 E-value=7.4e+02 Score=27.47 Aligned_cols=121 Identities=9% Similarity=0.016 Sum_probs=72.6
Q ss_pred CCCCeEEEEeccCCCCCChHH-HHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCC------CCcEEEEEEcCCC-
Q 015058 255 PNRPALVVSSTSWTPDEDFGI-LLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYL------YPRLLFIITGKGP- 326 (414)
Q Consensus 255 ~~~~~~i~~vgrl~~~Kg~~~-LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~p~i~liI~G~G~- 326 (414)
|+. ++++++-|+++.|.+.. ++....++.+ |+ ...++|+.+. .| ..|++.|+..
T Consensus 598 p~s-Lfdvq~KR~heYKRq~LniL~ii~ry~~----Ik------------~~~~~~~~p~~~~~~~~P-~~~IFaGKAaP 659 (879)
T 1ygp_A 598 DDT-LFDMQVKRIHEYKRQQLNVFGIIYRYLA----MK------------NMLKNGASIEEVARKYPR-KVSIFGGKSAP 659 (879)
T ss_dssp GGC-EEEEEESCCCGGGTHHHHHHHHHHHHHH----HH------------HHHHTTCCHHHHHHHSCC-EEEEEECCCCT
T ss_pred CCe-eeeeeeehhhHhHHHHHHHHHHHHHHHH----HH------------hCccccCCCcccccCCCC-eEEEEeccCCC
Confidence 555 68999999999999988 6777666543 11 0111122221 34 8999999863
Q ss_pred Ch---HHHHHHHHHcC--------C--C-cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEE
Q 015058 327 DK---ESYEEKIRRLR--------L--K-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLK 392 (414)
Q Consensus 327 ~~---e~l~~~i~~l~--------l--~-~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi 392 (414)
.- +.+.++|.+.. + . +|.|+. --.-+--..++.+||+-...++.+ -|.=+..=+=+|.=|.+.+
T Consensus 660 ~y~~aK~iIklI~~va~~iN~Dp~v~~~LKVVFle-nY~VslAe~iipaaDvseqistag-~EASGTsnMKfalNGaLtl 737 (879)
T 1ygp_A 660 GYYMAKLIIKLINCVADIVNNDESIEHLLKVVFVA-DYNVSKAEIIIPASDLSEHISTAG-TEASGTSNMKFVMNGGLII 737 (879)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCGGGTTSEEEEEET-TCCHHHHHHHGGGCSEEEECCCTT-CCSCCHHHHHHHTTTCEEE
T ss_pred CcHHHHHHHHHHHHHHHHhccChhhCCceEEEEeC-CCCHHHHHHhhhhhhhhhhCCCCC-ccccCchhhHHHHcCCeee
Confidence 22 23333343331 2 2 699996 447777888999999987433221 1111222334677788877
Q ss_pred Eee
Q 015058 393 LLW 395 (414)
Q Consensus 393 ~s~ 395 (414)
++-
T Consensus 738 gtl 740 (879)
T 1ygp_A 738 GTV 740 (879)
T ss_dssp EES
T ss_pred ecc
Confidence 764
No 94
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=24.36 E-value=1.7e+02 Score=29.52 Aligned_cols=135 Identities=10% Similarity=0.139 Sum_probs=73.0
Q ss_pred CEEEEEEeCCCCCChHHH-HHHHHHHhhCCCcEEEEecCCCCCCcccccCCCeEEEEeecCCCCCCCCCCchHHHHHHHH
Q 015058 5 GRACVVVLGDLGRSPRMQ-YQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLK 83 (414)
Q Consensus 5 ~~~~v~~~~d~~~~~r~~-~~a~~La~~~g~eV~vv~~~~~~~~~~~~~~~~i~i~~v~~~~~~~~~~~~~~~~~~~l~k 83 (414)
..|+|++.|- +++- ..|+.|.++ ||+|+|+-..+.. .....+..++.+ +.+-. ..+ .
T Consensus 2 ~~M~iiI~G~----G~vG~~la~~L~~~-~~~v~vId~d~~~-~~~~~~~~~~~~--i~Gd~-------~~~-------~ 59 (461)
T 4g65_A 2 NAMKIIILGA----GQVGGTLAENLVGE-NNDITIVDKDGDR-LRELQDKYDLRV--VNGHA-------SHP-------D 59 (461)
T ss_dssp CCEEEEEECC----SHHHHHHHHHTCST-TEEEEEEESCHHH-HHHHHHHSSCEE--EESCT-------TCH-------H
T ss_pred CcCEEEEECC----CHHHHHHHHHHHHC-CCCEEEEECCHHH-HHHHHHhcCcEE--EEEcC-------CCH-------H
Confidence 3588999883 3443 346788775 9999999755422 122222334444 33111 112 1
Q ss_pred HHHHHHHHHHHHhhhcCCCcEEEEeCCCCchHHHHHHHHHhhcCCeE-EEEEcCcchhhhhhccCCCcHHHHHHHHHHHH
Q 015058 84 PLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAF-IVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKY 162 (414)
Q Consensus 84 ~l~~~~~l~~~l~~k~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~-Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~ 162 (414)
.+.++ ...+.|++++-+...-....++.+|+.+.+.+- |.-.++..+. .. .+..
T Consensus 60 ~L~~A---------gi~~ad~~ia~t~~De~Nl~~~~~Ak~~~~~~~~iar~~~~~~~--------~~--------~~~l 114 (461)
T 4g65_A 60 VLHEA---------GAQDADMLVAVTNTDETNMAACQVAFTLFNTPNRIARIRSPQYL--------AQ--------KEAL 114 (461)
T ss_dssp HHHHH---------TTTTCSEEEECCSCHHHHHHHHHHHHHHHCCSSEEEECCCHHHH--------TT--------HHHH
T ss_pred HHHhc---------CCCcCCEEEEEcCChHHHHHHHHHHHHhcCCccceeEeccchhh--------hh--------hhhh
Confidence 22221 247899988876522223455666666656554 4444553220 00 1112
Q ss_pred Hhc---cCCEEEEeCHHHHHHHHHhhC
Q 015058 163 YGK---MANGCLCVTQAMQHELAQNWG 186 (414)
Q Consensus 163 ~~k---~ad~ii~vS~~~~~~l~~~~g 186 (414)
+.+ ..|.+++..+.+.+.+.+.-.
T Consensus 115 ~~~~~~giD~iIsPe~~~a~~I~~~i~ 141 (461)
T 4g65_A 115 FKSGAIPVDHLIAPEELVTSYIERLIQ 141 (461)
T ss_dssp TTTSSSCCSEEECHHHHHHHHHHHHHT
T ss_pred hhcccCCcceeecHHHHHHHHHHHhcc
Confidence 222 368899888888887776543
No 95
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=24.36 E-value=1.1e+02 Score=27.42 Aligned_cols=79 Identities=13% Similarity=-0.093 Sum_probs=48.1
Q ss_pred CcEEEEEEcCCC-----ChHHHHHHHHHcCCCcEEEecC-CCChhhHHHHHhhccEEEeeccCCC-------CCCCchhH
Q 015058 315 PRLLFIITGKGP-----DKESYEEKIRRLRLKRVAFRTM-WLSAEDYPLLLGSADLGVCLHTSSS-------GLDLPMKV 381 (414)
Q Consensus 315 p~i~liI~G~G~-----~~e~l~~~i~~l~l~~V~f~g~-~v~~ed~~~~l~~aDl~V~~~~s~~-------g~~lP~kl 381 (414)
+++.|+=++.|+ .-+++++..+++|.+ +..+.- .-..+|....+..||..+++-..+. ..++-..+
T Consensus 28 ~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~-v~~~~i~~~~~~~~~~~l~~ad~I~l~GG~~~~l~~~L~~~gl~~~l 106 (206)
T 3l4e_A 28 KTVTFIPTASTVEEVTFYVEAGKKALESLGLL-VEELDIATESLGEITTKLRKNDFIYVTGGNTFFLLQELKRTGADKLI 106 (206)
T ss_dssp CEEEEECGGGGGCSCCHHHHHHHHHHHHTTCE-EEECCTTTSCHHHHHHHHHHSSEEEECCSCHHHHHHHHHHHTHHHHH
T ss_pred CEEEEECCCCCCCCHHHHHHHHHHHHHHcCCe-EEEEEecCCChHHHHHHHHhCCEEEECCCCHHHHHHHHHHCChHHHH
Confidence 445444445552 225667777888885 444410 0156777789999999886522110 12244567
Q ss_pred HHHHHcCCeEEEe
Q 015058 382 CYCWYSRYSLKLL 394 (414)
Q Consensus 382 ~Eama~G~Pvi~s 394 (414)
-|+...|+|++.+
T Consensus 107 ~~~~~~G~p~~G~ 119 (206)
T 3l4e_A 107 LEEIAAGKLYIGE 119 (206)
T ss_dssp HHHHHTTCEEEEE
T ss_pred HHHHHcCCeEEEE
Confidence 8888899999873
No 96
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=24.11 E-value=3.7e+02 Score=23.63 Aligned_cols=136 Identities=11% Similarity=0.062 Sum_probs=0.0
Q ss_pred EEeCCCCCChHHHHHHHHHHhhCCCcEEEEecCCCCCCcccccCCCeEEEEeecCCCCCCCCCCchHHHHHHHHHHHHHH
Q 015058 10 VVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFF 89 (414)
Q Consensus 10 ~~~~d~~~~~r~~~~a~~La~~~g~eV~vv~~~~~~~~~~~~~~~~i~i~~v~~~~~~~~~~~~~~~~~~~l~k~l~~~~ 89 (414)
+..+++ ......+..+ .+ |.+ .+++.+++ ...+.++.++++..++ ....-+.+.++..++
T Consensus 33 i~~~~l---~~~v~~a~~~-~~-~~d-VIISRGgt--a~~lr~~~~iPVV~I~----------~s~~Dil~al~~a~~-- 92 (196)
T 2q5c_A 33 TKTASL---TRASKIAFGL-QD-EVD-AIISRGAT--SDYIKKSVSIPSISIK----------VTRFDTMRAVYNAKR-- 92 (196)
T ss_dssp EEECCH---HHHHHHHHHH-TT-TCS-EEEEEHHH--HHHHHTTCSSCEEEEC----------CCHHHHHHHHHHHGG--
T ss_pred EEECCH---HHHHHHHHHh-cC-CCe-EEEECChH--HHHHHHhCCCCEEEEc----------CCHhHHHHHHHHHHh--
Q ss_pred HHHHHHhhhcCCCcEEEEeCCCCchHHHHHHHHHhhcCCeE-EEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCC
Q 015058 90 MLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAF-IVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMAN 168 (414)
Q Consensus 90 ~l~~~l~~k~~~~Dvvh~~~pp~~~~~~~~~la~~~~~~~~-Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad 168 (414)
.+..+-++..+ ....-+..++.+.+.++ ++.+++... +...+++...+.++
T Consensus 93 ----------~~~kIavvg~~---~~~~~~~~~~~ll~~~i~~~~~~~~~e---------------~~~~i~~l~~~G~~ 144 (196)
T 2q5c_A 93 ----------FGNELALIAYK---HSIVDKHEIEAMLGVKIKEFLFSSEDE---------------ITTLISKVKTENIK 144 (196)
T ss_dssp ----------GCSEEEEEEES---SCSSCHHHHHHHHTCEEEEEEECSGGG---------------HHHHHHHHHHTTCC
T ss_pred ----------hCCcEEEEeCc---chhhHHHHHHHHhCCceEEEEeCCHHH---------------HHHHHHHHHHCCCe
Q ss_pred EEEEeCHHHHHHHHHhhCCcEEEecCC
Q 015058 169 GCLCVTQAMQHELAQNWGIKATVLYDQ 195 (414)
Q Consensus 169 ~ii~vS~~~~~~l~~~~gi~i~vI~n~ 195 (414)
.|++ ....-.+++++|++...|+.+
T Consensus 145 vvVG--~~~~~~~A~~~Gl~~vli~sg 169 (196)
T 2q5c_A 145 IVVS--GKTVTDEAIKQGLYGETINSG 169 (196)
T ss_dssp EEEE--CHHHHHHHHHTTCEEEECCCC
T ss_pred EEEC--CHHHHHHHHHcCCcEEEEecC
No 97
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=23.85 E-value=97 Score=31.20 Aligned_cols=77 Identities=13% Similarity=0.120 Sum_probs=54.1
Q ss_pred CCCcEEEEEEcCCCChHHHHHHHHHcCCCcEEEecCC--C--C---------------------hhhHHHHHhhccEEEe
Q 015058 313 LYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMW--L--S---------------------AEDYPLLLGSADLGVC 367 (414)
Q Consensus 313 ~~p~i~liI~G~G~~~e~l~~~i~~l~l~~V~f~g~~--v--~---------------------~ed~~~~l~~aDl~V~ 367 (414)
..++.+++|.|-|.---..-+++..+|.++|+++.-. + . ...+.+.+..||++|-
T Consensus 185 ~l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~~~~~~~~L~eav~~ADV~IG 264 (398)
T 2a9f_A 185 SLDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFGIINEQEAAQLAPHHLDIAKVTNREFKSGTLEDALEGADIFIG 264 (398)
T ss_dssp CTTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTCCCSCCC---CHHHHHSCTTCCCSCSHHHHTTCSEEE
T ss_pred CCCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCCcccCCccccchHHHHHHhhccCcccchhhHHHHhccCCEEEe
Confidence 3567999999999988788888888899888887422 1 1 1236677888999985
Q ss_pred eccCCCCCCCchhHHHHHHcCCeEEE
Q 015058 368 LHTSSSGLDLPMKVCYCWYSRYSLKL 393 (414)
Q Consensus 368 ~~~s~~g~~lP~kl~Eama~G~Pvi~ 393 (414)
.+. .+ -+...++..|+ .-|||-
T Consensus 265 ~Sa--pg-l~T~EmVk~Ma-~~pIIf 286 (398)
T 2a9f_A 265 VSA--PG-VLKAEWISKMA-ARPVIF 286 (398)
T ss_dssp CCS--TT-CCCHHHHHTSC-SSCEEE
T ss_pred cCC--CC-CCCHHHHHhhC-CCCEEE
Confidence 432 12 25667788887 456664
No 98
>4fyk_A Deoxyribonucleoside 5'-monophosphate N-glycosidas; hydrolas; HET: SRA; 1.79A {Rattus norvegicus} PDB: 4fyh_A* 4fyi_A* 2klh_A*
Probab=23.81 E-value=2e+02 Score=24.88 Aligned_cols=37 Identities=19% Similarity=0.091 Sum_probs=24.3
Q ss_pred HHHhhccEEEee-ccCCCCCCCchhHHHHHHcCCeEEEee
Q 015058 357 LLLGSADLGVCL-HTSSSGLDLPMKVCYCWYSRYSLKLLW 395 (414)
Q Consensus 357 ~~l~~aDl~V~~-~~s~~g~~lP~kl~Eama~G~Pvi~s~ 395 (414)
..+.+||+.|.. ...++| -..-+-.|.+.|+||++..
T Consensus 64 ~~i~~aD~vvA~l~~~d~G--t~~EiG~A~algkPV~~l~ 101 (152)
T 4fyk_A 64 NWLQQADVVVAEVTQPSLG--VGYELGRAVALGKPILCLF 101 (152)
T ss_dssp HHHHHCSEEEEECSSCCHH--HHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHCCEEEEeCCCCCCC--HHHHHHHHHHcCCeEEEEE
Confidence 468899998843 222222 2335666799999999943
No 99
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=23.67 E-value=4.3e+02 Score=26.03 Aligned_cols=88 Identities=17% Similarity=0.167 Sum_probs=46.9
Q ss_pred EEEEeCCCCchHHHHHHHHHhhcCCeEEEEEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEEe--CHHHHHHH
Q 015058 104 VFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCV--TQAMQHEL 181 (414)
Q Consensus 104 vvh~~~pp~~~~~~~~~la~~~~~~~~Iv~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~v--S~~~~~~l 181 (414)
+.....-||.-+=..--.+...+|.-++.- +. + ..++++.-.+.--.+ .+.+++|.|+.= ++...+.+
T Consensus 74 va~lF~e~STRTR~SFE~A~~~LGg~vi~l--~~--~--~ss~~kgEsl~DTar----vLs~~~D~IviR~~~~~~~~~l 143 (365)
T 4amu_A 74 IAILFQKDSTRTRCAFEVAASDLGAGVTYI--GP--S--GSNMGKKESIEDTAK----VLGRFYDGIEFRGFAQSDVDAL 143 (365)
T ss_dssp EEEEESSCCHHHHHHHHHHHHHHTCEEEEE--CH--H--HHCCSSSSCHHHHHH----HHHHHCSEEEEECSCHHHHHHH
T ss_pred EEEEecCCCchHHHHHHHHHHhCCCEEEEc--CC--c--cccCCCCcCHHHHHH----HHHhhCcEEEEecCChhHHHHH
Confidence 444555556666544344455566666541 11 1 112343333333333 344567977664 56677788
Q ss_pred HHhhCCcEEEecCCCCCCcCCCC
Q 015058 182 AQNWGIKATVLYDQPPEFFHPTS 204 (414)
Q Consensus 182 ~~~~gi~i~vI~n~~~~~f~p~~ 204 (414)
++.-+++ || |+-.+.+||+.
T Consensus 144 A~~s~vP--VI-Na~~~~~HPtQ 163 (365)
T 4amu_A 144 VKYSGVP--VW-NGLTDDEHPTQ 163 (365)
T ss_dssp HHHHCSC--EE-EEECSSCCHHH
T ss_pred HHhCCCC--EE-eCCCCCCCcHH
Confidence 8876776 33 55346789973
No 100
>3lkv_A Uncharacterized conserved domain protein; ATPase binding cassette, PSI, MCSG, structural genomics, Pro structure initiative; HET: PHE; 2.20A {Vibrio cholerae}
Probab=23.21 E-value=4.3e+02 Score=24.15 Aligned_cols=69 Identities=13% Similarity=-0.028 Sum_probs=40.0
Q ss_pred hHHHHHHHHHcCCCcEEEecCCCChhhHHHHH----hhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCC
Q 015058 328 KESYEEKIRRLRLKRVAFRTMWLSAEDYPLLL----GSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCS 398 (414)
Q Consensus 328 ~e~l~~~i~~l~l~~V~f~g~~v~~ed~~~~l----~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~ 398 (414)
.+.+++.++++|++-+.. . ..+.+++...+ ...|++..+......-..+....-+..+++|+++.+...
T Consensus 158 ~~~~~~~~~~~g~~~v~~-~-~~~~~~~~~~~~~l~~~~d~i~~~~d~~~~~~~~~i~~~~~~~~iPv~~~~~~~ 230 (302)
T 3lkv_A 158 MELLKLSAAKHGIKLVEA-T-ALKSADVQSATQAIAEKSDVIYALIDNTVASAIEGMIVAANQAKTPVFGAATSY 230 (302)
T ss_dssp HHHHHHHHHHTTCEEEEE-E-CSSGGGHHHHHHHHHTTCSEEEECSCHHHHHTHHHHHHHHHHTTCCEEESSHHH
T ss_pred HHHHHHHHHHcCCEEEEE-e-cCChHHHHHHHHhccCCeeEEEEeCCcchhhHHHHHHHHHhhcCCceeeccccc
Confidence 356778888888874433 2 34566666555 456766543211111113334445678999999977643
No 101
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=23.05 E-value=5.1e+02 Score=24.93 Aligned_cols=87 Identities=17% Similarity=0.227 Sum_probs=47.5
Q ss_pred EEEEeCCCCchHHHHHHHHHhhcCCeEEE-EEcCcchhhhhhccCCCcHHHHHHHHHHHHHhccCCEEEE--eCHHHHHH
Q 015058 104 VFLVQNPPSVPTLVAVKWASSLRRSAFIV-DWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLC--VTQAMQHE 180 (414)
Q Consensus 104 vvh~~~pp~~~~~~~~~la~~~~~~~~Iv-~~H~~~~~l~~~~~~~~~~~~~i~~~~Ek~~~k~ad~ii~--vS~~~~~~ 180 (414)
+.....-||.-+=..--.+.+.+|..++. +..+. ++++.-.+.-..+ .+.+++|.|+. -++...+.
T Consensus 49 l~~lF~e~STRTR~SFe~A~~~LGg~~i~l~~~~s-------s~~kgEsl~DTar----vls~~~D~iviR~~~~~~~~~ 117 (321)
T 1oth_A 49 LGMIFEKRSTRTRLSTETGFALLGGHPCFLTTQDI-------HLGVNESLTDTAR----VLSSMADAVLARVYKQSDLDT 117 (321)
T ss_dssp EEEEESSCCSHHHHHHHHHHHHTTCEEEEEETTTS-------CBTTTBCHHHHHH----HHHHHCSEEEEECSCHHHHHH
T ss_pred EEEEecCCCcchHHHHHHHHHHcCCeEEEECCCcC-------cCCCCCCHHHHHH----HHHHhCCEEEEeCCChhHHHH
Confidence 44444445666654434445556655543 32222 1233323333333 34456798877 57788888
Q ss_pred HHHhhCCcEEEecCCCCCCcCCCC
Q 015058 181 LAQNWGIKATVLYDQPPEFFHPTS 204 (414)
Q Consensus 181 l~~~~gi~i~vI~n~~~~~f~p~~ 204 (414)
+++.-+++ || |+..+..||+.
T Consensus 118 lA~~~~vP--VI-Na~~~~~HPtQ 138 (321)
T 1oth_A 118 LAKEASIP--II-NGLSDLYHPIQ 138 (321)
T ss_dssp HHHHCSSC--EE-ESCCSSCCHHH
T ss_pred HHHhCCCC--EE-cCCCCCCCcHH
Confidence 88765555 44 56447899973
No 102
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=22.92 E-value=2e+02 Score=24.22 Aligned_cols=27 Identities=19% Similarity=0.245 Sum_probs=19.8
Q ss_pred CChHHHHHHHHHHhhCCCcEEEEecCCC
Q 015058 17 RSPRMQYQALSLARQMSLEVDVVAYGGS 44 (414)
Q Consensus 17 ~~~r~~~~a~~La~~~g~eV~vv~~~~~ 44 (414)
.+.-....|..|+++ |++|.++-..+.
T Consensus 15 KTt~a~~la~~la~~-g~~vlliD~D~~ 41 (206)
T 4dzz_A 15 KTTAVINIATALSRS-GYNIAVVDTDPQ 41 (206)
T ss_dssp HHHHHHHHHHHHHHT-TCCEEEEECCTT
T ss_pred HHHHHHHHHHHHHHC-CCeEEEEECCCC
Confidence 344455677888886 999999987653
No 103
>3j20_B 30S ribosomal protein S2P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=22.90 E-value=74 Score=29.05 Aligned_cols=72 Identities=3% Similarity=-0.172 Sum_probs=43.9
Q ss_pred EEEEEEcCCCC-hHHHHHHHHHcCCCc--EEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEE
Q 015058 317 LLFIITGKGPD-KESYEEKIRRLRLKR--VAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKL 393 (414)
Q Consensus 317 i~liI~G~G~~-~e~l~~~i~~l~l~~--V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~ 393 (414)
-.++++|..+. ++..++.+++-|-.. =.|+||-+...... -+..-|+.++... ..+ -..+-||-..|+|+|+
T Consensus 65 ~~ilfV~tk~~~~~~V~k~A~~~g~~~v~~rw~gG~lTN~~~~-~~~~Pdllvv~Dp--~~d--~~ai~EA~~l~IP~Ia 139 (202)
T 3j20_B 65 QSILAVSVRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPAVK-NFFEPDVLIVTDP--RAD--HQAMREAVEIGIPIVA 139 (202)
T ss_dssp SCEEEECCCTTTHHHHHHHHHHHSCCCCCSSCCSSSSSCSSSS-SCCCCSEEEESCT--TTS--HHHHHHHHHHTCCEEE
T ss_pred CeEEEEecChHHHHHHHHHHHHHCCceeCceecCCCcccHhHH-hccCCCeEEEeCC--ccc--hHHHHHHHHcCCCEEE
Confidence 35677887654 456666777777653 34666544333222 2346677665422 212 3478999999999998
No 104
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=22.82 E-value=62 Score=29.62 Aligned_cols=35 Identities=23% Similarity=0.117 Sum_probs=23.9
Q ss_pred EEEEEeCCCCCChHHHHHHHHHHhhCCCcEEEEecCCC
Q 015058 7 ACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGS 44 (414)
Q Consensus 7 ~~v~~~~d~~~~~r~~~~a~~La~~~g~eV~vv~~~~~ 44 (414)
|+|++.|.-|-=+ ...+..|.++ ||+|++++..+.
T Consensus 1 MkILVTGatGfIG--~~L~~~L~~~-G~~V~~l~R~~~ 35 (298)
T 4b4o_A 1 MRVLVGGGTGFIG--TALTQLLNAR-GHEVTLVSRKPG 35 (298)
T ss_dssp CEEEEETTTSHHH--HHHHHHHHHT-TCEEEEEESSCC
T ss_pred CEEEEECCCCHHH--HHHHHHHHHC-CCEEEEEECCCC
Confidence 5678887543222 2346788886 999999987643
No 105
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=22.64 E-value=1.3e+02 Score=27.46 Aligned_cols=59 Identities=15% Similarity=0.180 Sum_probs=31.3
Q ss_pred CCCCCEEEEEEeCCCCCChHHHHHHHHHHhh-CCCcEEEEecC-CCCCCcccccCCCeEEEEee
Q 015058 1 MGRRGRACVVVLGDLGRSPRMQYQALSLARQ-MSLEVDVVAYG-GSKPHAAILEHPSIHIHTMT 62 (414)
Q Consensus 1 ~~~~~~~~v~~~~d~~~~~r~~~~a~~La~~-~g~eV~vv~~~-~~~~~~~~~~~~~i~i~~v~ 62 (414)
|++++|+.|++-|. ..-++...+.+.+. .+++|..|... +.....+..+..||+++.++
T Consensus 5 ~~~~~ri~vl~SG~---gsnl~all~~~~~~~~~~~I~~Vis~~~~a~~l~~A~~~gIp~~~~~ 65 (215)
T 3kcq_A 5 MKKELRVGVLISGR---GSNLEALAKAFSTEESSVVISCVISNNAEARGLLIAQSYGIPTFVVK 65 (215)
T ss_dssp --CCEEEEEEESSC---CHHHHHHHHHTCCC-CSEEEEEEEESCTTCTHHHHHHHTTCCEEECC
T ss_pred CCCCCEEEEEEECC---cHHHHHHHHHHHcCCCCcEEEEEEeCCcchHHHHHHHHcCCCEEEeC
Confidence 66777877776653 33455555555442 12466554433 22222234456789998876
No 106
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=22.47 E-value=1.7e+02 Score=28.38 Aligned_cols=55 Identities=9% Similarity=-0.012 Sum_probs=30.8
Q ss_pred hHHHHHHHHHcCCCcEEEecCCCChhhHHHHHhhc--cEEEeeccCCCCCCCchhHHHHHHcCCeEEE
Q 015058 328 KESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSA--DLGVCLHTSSSGLDLPMKVCYCWYSRYSLKL 393 (414)
Q Consensus 328 ~e~l~~~i~~l~l~~V~f~g~~v~~ed~~~~l~~a--Dl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~ 393 (414)
.++.++.+++++..++ .+|+.++++.. |+.++...... =..-+.+|+..|++|++
T Consensus 69 ~~~a~~~a~~~~~~~~--------y~d~~~ll~~~~vD~V~I~tp~~~---H~~~~~~al~aGkhVl~ 125 (412)
T 4gqa_A 69 QAMAERHAAKLGAEKA--------YGDWRELVNDPQVDVVDITSPNHL---HYTMAMAAIAAGKHVYC 125 (412)
T ss_dssp HHHHHHHHHHHTCSEE--------ESSHHHHHHCTTCCEEEECSCGGG---HHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHcCCCeE--------ECCHHHHhcCCCCCEEEECCCcHH---HHHHHHHHHHcCCCeEe
Confidence 3445555555554321 24677778754 55443211111 12357899999999987
No 107
>1xiq_A Nucleoside diphosphate kinase B; protein structure initiative, structural genomics, SGPP; 3.05A {Plasmodium falciparum} SCOP: d.58.6.1
Probab=22.47 E-value=1.6e+02 Score=25.56 Aligned_cols=59 Identities=5% Similarity=-0.115 Sum_probs=42.4
Q ss_pred HHHHHHHHHcCCC--cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCCcc
Q 015058 329 ESYEEKIRRLRLK--RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCSVV 400 (414)
Q Consensus 329 e~l~~~i~~l~l~--~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~~~ 400 (414)
.++.+.+.+.|++ ..... .+++++....|+.-. +..+=..++++|.|| ||++....|..
T Consensus 27 GeIi~rie~~Gf~Iv~~K~~--~ls~e~a~~fY~~h~----------~kpff~~Lv~~mtSG-Pvvamvleg~n 87 (157)
T 1xiq_A 27 GTIIKRFEKKGYKLIAIKML--NPTEEILKEHYKELS----------DQPFFKNLVAYISKG-PVVAMVWEGVD 87 (157)
T ss_dssp HHHHHHHHHTTCEEEEEEEE--CCCHHHHHHHTGGGS----------SSSSCTTHHHHHTTS-CEEEEEEESTT
T ss_pred HHHHHHHHHCCCEEEEEEEe--cCCHHHHHHHHHHHc----------CCCchHHHHHHHcCC-CEEEEEEeccc
Confidence 5677888888987 44443 678999999886531 112222489999999 99998888864
No 108
>1l7b_A DNA ligase; BRCT, autostructure, structural genomics, NESG, PSI, protein structure initiative, northeast structural genomics consortium; HET: DNA; NMR {Thermus thermophilus} SCOP: c.15.1.2
Probab=22.07 E-value=81 Score=24.86 Aligned_cols=62 Identities=21% Similarity=0.110 Sum_probs=44.1
Q ss_pred CCcEEEEEEcCCC-ChHHHHHHHHHcCCCcEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEE
Q 015058 314 YPRLLFIITGKGP-DKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLK 392 (414)
Q Consensus 314 ~p~i~liI~G~G~-~~e~l~~~i~~l~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi 392 (414)
..+..|++.|.=+ .+++++++++++|-+ +.+ .|+ ...|..|+- ..-.+|+-.|...|+|||
T Consensus 8 l~G~~~v~TG~l~~~R~e~~~~i~~~Gg~---v~~-sVs--------kkt~~LV~g------~~~gsK~~kA~~lgI~Ii 69 (92)
T 1l7b_A 8 LKGLTFVITGELSRPREEVKALLRRLGAK---VTD-SVS--------RKTSYLVVG------ENPGSKLEKARALGVPTL 69 (92)
T ss_dssp STTCEEECSTTTTSCHHHHHHHHHHTTCE---EES-CCS--------SSCCCBEEC------SSSSTTHHHHHCSSSCCE
T ss_pred cCCcEEEEecCCCCCHHHHHHHHHHcCCE---EeC-ccc--------CCeeEEEeC------CCCChHHHHHHHcCCcEE
Confidence 4568999999622 789999999999864 333 333 356666642 122478999999999998
Q ss_pred E
Q 015058 393 L 393 (414)
Q Consensus 393 ~ 393 (414)
.
T Consensus 70 ~ 70 (92)
T 1l7b_A 70 T 70 (92)
T ss_dssp E
T ss_pred e
Confidence 5
No 109
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=22.03 E-value=1.1e+02 Score=24.68 Aligned_cols=45 Identities=9% Similarity=0.101 Sum_probs=32.0
Q ss_pred EEEEcCCCC-----hHHHHHHHHHcCCC-cEEEecCCCChhhHHHHHhhccEEEe
Q 015058 319 FIITGKGPD-----KESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVC 367 (414)
Q Consensus 319 liI~G~G~~-----~e~l~~~i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~ 367 (414)
++++|.|-- ..++++.++++|+. .|...+ ..+++..+..+|+.++
T Consensus 25 lvvC~sG~gTS~ll~~kl~~~~~~~gi~~~V~~~~----~~~~~~~~~~~DlIis 75 (113)
T 1tvm_A 25 IVACGGAVATSTMAAEEIKELCQSHNIPVELIQCR----VNEIETYMDGVHLICT 75 (113)
T ss_dssp EEESCSCSSHHHHHHHHHHHHHHHTTCCEEEEEEC----TTTTTTSTTSCSEEEE
T ss_pred EEECCCCHHHHHHHHHHHHHHHHHcCCeEEEEEec----HHHHhhccCCCCEEEE
Confidence 566888743 57888888889988 566653 4455555678999885
No 110
>1nhk_R Nucleoside diphosphate kinase; phosphotransferase; HET: CMP; 1.90A {Myxococcus xanthus} SCOP: d.58.6.1 PDB: 1nlk_R* 2nck_R 3pj9_A
Probab=21.47 E-value=1.6e+02 Score=25.13 Aligned_cols=60 Identities=10% Similarity=-0.007 Sum_probs=43.8
Q ss_pred hHHHHHHHHHcCCC--cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCCcc
Q 015058 328 KESYEEKIRRLRLK--RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCSVV 400 (414)
Q Consensus 328 ~e~l~~~i~~l~l~--~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~~~ 400 (414)
..++.+.+.+.|++ ..... .+++++...+|+.- .+..+=..++++|.|| ||++....|..
T Consensus 19 ~g~Ii~~ie~~Gf~I~~~k~~--~ls~~~a~~~Y~~h----------~~kpff~~Lv~~mtSG-Pvva~vl~g~~ 80 (144)
T 1nhk_R 19 IGKIISRFEEKGLKPVAIRLQ--HLSQAQAEGFYAVH----------KARPFFKDLVQFMISG-PVVLMVLEGEN 80 (144)
T ss_dssp HHHHHHHHHHTTCEEEEEEEE--CCCHHHHHHHTGGG----------TTSTTHHHHHHHHTSS-CEEEEEEEEET
T ss_pred HHHHHHHHHHCCCEEEEEEEe--cCCHHHHHHHHHHH----------cCCCchHHHHHHhccC-CEEEEEEeccC
Confidence 35677888888987 44443 67899999888642 1233444689999999 99998888764
No 111
>3en0_A Cyanophycinase; serine protease, beta peptide specific, hydrolase, protease; 1.50A {Synechocystis SP}
Probab=21.40 E-value=4.7e+02 Score=24.72 Aligned_cols=65 Identities=12% Similarity=0.053 Sum_probs=42.3
Q ss_pred HHHHHHHHHcCCCcEEEecCC----CChhhHHHHHhhccEEEeeccCC-------CCCCCchhHHHHHHcC-CeEEE
Q 015058 329 ESYEEKIRRLRLKRVAFRTMW----LSAEDYPLLLGSADLGVCLHTSS-------SGLDLPMKVCYCWYSR-YSLKL 393 (414)
Q Consensus 329 e~l~~~i~~l~l~~V~f~g~~----v~~ed~~~~l~~aDl~V~~~~s~-------~g~~lP~kl~Eama~G-~Pvi~ 393 (414)
+.+.+..+++|.+.|..+--+ .+.+++...+..||+..+.-..+ .+.++-..+-|++..| .|++.
T Consensus 74 ~~~~~~f~~lG~~~v~~L~i~~r~~a~~~~~~~~l~~ad~I~v~GGnt~~l~~~l~~t~l~~~L~~~~~~G~~~~~G 150 (291)
T 3en0_A 74 ERYQTIFSDMGVKELKVLDIRDRAQGDDSGYRLFVEQCTGIFMTGGDQLRLCGLLADTPLMDRIRQRVHNGEISLAG 150 (291)
T ss_dssp HHHHHHHHHHCCSEEEECCCCSGGGGGCHHHHHHHHHCSEEEECCSCHHHHHHHHTTCHHHHHHHHHHHTTSSEEEE
T ss_pred HHHHHHHHHcCCCeeEEEEecCccccCCHHHHHHHhcCCEEEECCCCHHHHHHHHHhCCHHHHHHHHHHCCCeEEEE
Confidence 567778888999777666311 23456788999999866431111 1233455677888899 88875
No 112
>1qv9_A F420-dependent methylenetetrahydromethanopterin dehydrogenase; monomer: alpha/beta domain, helix bundle, trimer of dimers, oxidoreductase; HET: MSE; 1.54A {Methanopyrus kandleri} SCOP: c.127.1.1 PDB: 1u6i_A 1u6j_A 1u6k_A* 3iqe_A* 3iqf_A* 3iqz_A*
Probab=21.38 E-value=4.4e+02 Score=24.90 Aligned_cols=36 Identities=14% Similarity=0.173 Sum_probs=26.0
Q ss_pred CCCcEEEEeCC-CCchHHHHHHHHHhhcCCeEEEEEc
Q 015058 100 ASPDVFLVQNP-PSVPTLVAVKWASSLRRSAFIVDWH 135 (414)
Q Consensus 100 ~~~Dvvh~~~p-p~~~~~~~~~la~~~~~~~~Iv~~H 135 (414)
.+||++++-+| |..|....++-+.+-.++|+|+.-.
T Consensus 63 ~~pDfvI~isPN~a~PGP~~ARE~l~~~~iP~IvI~D 99 (283)
T 1qv9_A 63 FEPDFIVYGGPNPAAPGPSKAREMLADSEYPAVIIGD 99 (283)
T ss_dssp HCCSEEEEECSCTTSHHHHHHHHHHHTSSSCEEEEEE
T ss_pred cCCCEEEEECCCCCCCCchHHHHHHHhCCCCEEEEcC
Confidence 59999888877 5666666666555668999987433
No 113
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=21.29 E-value=2.1e+02 Score=26.79 Aligned_cols=54 Identities=17% Similarity=0.164 Sum_probs=37.7
Q ss_pred EEEEEeCCCC-CChHHHHHHHHHHhhCCCcEEEEecCCCC--CCcccccCCCeEEEEee
Q 015058 7 ACVVVLGDLG-RSPRMQYQALSLARQMSLEVDVVAYGGSK--PHAAILEHPSIHIHTMT 62 (414)
Q Consensus 7 ~~v~~~~d~~-~~~r~~~~a~~La~~~g~eV~vv~~~~~~--~~~~~~~~~~i~i~~v~ 62 (414)
|.|++..|=| .++++...++.|.+. | +|.|+++.... ....+....-++++++.
T Consensus 2 M~ILlTNDDGi~apGi~aL~~~l~~~-g-~V~VVAP~~~~Sg~g~sit~~~pl~~~~~~ 58 (251)
T 2phj_A 2 PTFLLVNDDGYFSPGINALREALKSL-G-RVVVVAPDRNLSGVGHSLTFTEPLKMRKID 58 (251)
T ss_dssp CEEEEECSSCTTCHHHHHHHHHHTTT-S-EEEEEEESSCCTTSCCSCCCSSCEEEEEEE
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHhc-C-CEEEEecCCCccCCccceecCCCeEEEEec
Confidence 6788888878 799999999999885 7 99999987432 12222223445666654
No 114
>2vxb_A DNA repair protein RHP9; BRCT, nucleus, cell cycle, DNA damage, DNA replication inhibitor, phosphoprotein, checkpoint signalling; HET: DNA; 2.3A {Schizosaccharomyces pombe} PDB: 2vxc_A*
Probab=21.15 E-value=1e+02 Score=28.41 Aligned_cols=26 Identities=15% Similarity=0.244 Sum_probs=20.7
Q ss_pred CcEEEEEEcC----CCChHHHHHHHHHcCC
Q 015058 315 PRLLFIITGK----GPDKESYEEKIRRLRL 340 (414)
Q Consensus 315 p~i~liI~G~----G~~~e~l~~~i~~l~l 340 (414)
.++.|.|.|. +..+++++++|++.|=
T Consensus 4 ~g~~F~ls~~~~~~~~~k~~L~~~I~~~GG 33 (241)
T 2vxb_A 4 DDCVFAFSGPVHEDAYDRSALETVVQDHGG 33 (241)
T ss_dssp TTEEEEECCCSSTTSSCHHHHHHHHHHTTC
T ss_pred CCcEEEEecCCCCchhhHHHHHHHHHHCCC
Confidence 3578888876 3578999999999874
No 115
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=21.10 E-value=5.4e+02 Score=24.76 Aligned_cols=38 Identities=13% Similarity=0.247 Sum_probs=21.1
Q ss_pred CCCC-CEEEEEEeCCCCCChHHHHHHHHHHhhCCCcEEEEecCCC
Q 015058 1 MGRR-GRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGS 44 (414)
Q Consensus 1 ~~~~-~~~~v~~~~d~~~~~r~~~~a~~La~~~g~eV~vv~~~~~ 44 (414)
|..+ |++.|+-.+ .+..+..++..+ +|++|++++....
T Consensus 1 M~~~~k~l~Il~~~-----~~~~~i~~aa~~-lG~~vv~v~~~~~ 39 (425)
T 3vot_A 1 MTKRNKNLAIICQN-----KHLPFIFEEAER-LGLKVTFFYNSAE 39 (425)
T ss_dssp -CCCCCEEEEECCC-----TTCCHHHHHHHH-TTCEEEEEEETTS
T ss_pred CCCCCcEEEEECCC-----hhHHHHHHHHHH-CCCEEEEEECCCc
Confidence 5554 556555333 223334445545 6999999976653
No 116
>2hur_A NDK, nucleoside diphosphate kinase, NDP kinase; type II tetramer, signaling protein,transferase; 1.62A {Escherichia coli}
Probab=20.84 E-value=1.7e+02 Score=24.89 Aligned_cols=60 Identities=8% Similarity=-0.068 Sum_probs=43.9
Q ss_pred hHHHHHHHHHcCCC--cEEEecCCCChhhHHHHHhhccEEEeeccCCCCCCCchhHHHHHHcCCeEEEeeeCCcc
Q 015058 328 KESYEEKIRRLRLK--RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVCYCWYSRYSLKLLWTCSVV 400 (414)
Q Consensus 328 ~e~l~~~i~~l~l~--~V~f~g~~v~~ed~~~~l~~aDl~V~~~~s~~g~~lP~kl~Eama~G~Pvi~s~~~~~~ 400 (414)
..++.+.+++.|++ ..... .+++++...+|+.- .+..+=..++++|.|| ||++....|..
T Consensus 19 ~g~Ii~~ie~~Gf~I~~~k~~--~ls~~~a~~~Y~~h----------~~kpff~~Lv~~mtSG-Pvva~vl~g~~ 80 (142)
T 2hur_A 19 IGNIFARFEAAGFKIVGTKML--HLTVEQARGFYAEH----------DGKPFFDGLVEFMTSG-PIVVSVLEGEN 80 (142)
T ss_dssp HHHHHHHHHHTTCEEEEEEEE--CCCHHHHHHHTGGG----------TTSTTHHHHHHHHTSS-CEEEEEEEEET
T ss_pred HHHHHHHHHHCCCEEEEEEEe--cCCHHHHHHHHHHh----------cCCCchHHHHHHhcCC-CEEEEEEeccc
Confidence 35677888888998 44443 67899999888642 1233444689999999 99998887764
No 117
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=20.83 E-value=1.2e+02 Score=24.18 Aligned_cols=45 Identities=7% Similarity=0.026 Sum_probs=33.7
Q ss_pred EEEEcCCCC----hHHHHHHHHHcCCC-cEEEecCCCChhhHHHHHhhccEEEe
Q 015058 319 FIITGKGPD----KESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVC 367 (414)
Q Consensus 319 liI~G~G~~----~e~l~~~i~~l~l~-~V~f~g~~v~~ed~~~~l~~aDl~V~ 367 (414)
++++|.|-. -+.+++.++++|++ .|.-.+ ..++...+..+|++++
T Consensus 7 ll~Cg~G~sTS~l~~k~~~~~~~~gi~~~i~a~~----~~~~~~~~~~~Dvil~ 56 (106)
T 1e2b_A 7 YLFSSAGMSTSLLVSKMRAQAEKYEVPVIIEAFP----ETLAGEKGQNADVVLL 56 (106)
T ss_dssp EEECSSSTTTHHHHHHHHHHHHHSCCSEEEEEEC----SSSTTHHHHHCSEEEE
T ss_pred EEECCCchhHHHHHHHHHHHHHHCCCCeEEEEec----HHHHHhhccCCCEEEE
Confidence 567888853 35788889999998 666653 5566667889999884
No 118
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=20.82 E-value=4.1e+02 Score=25.43 Aligned_cols=105 Identities=10% Similarity=-0.014 Sum_probs=0.0
Q ss_pred HHHhccCCEEEE--eCHHHHHHHHHhhCCcEEEecCCCCCCcCCCChHHHHHHHHHhhhhccCCCCccccccCCCCCCCC
Q 015058 161 KYYGKMANGCLC--VTQAMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKA 238 (414)
Q Consensus 161 k~~~k~ad~ii~--vS~~~~~~l~~~~gi~i~vI~n~~~~~f~p~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 238 (414)
+.+.+++|.|+. -.+...+.+++.-+++ ||.-++.+.+||+
T Consensus 91 rvls~~~D~iviR~~~~~~~~~lA~~~~vP--VINag~g~~~HPt----------------------------------- 133 (306)
T 4ekn_B 91 RVISGYADIIVLRHPSEGAARLASEYSQVP--IINAGDGSNQHPT----------------------------------- 133 (306)
T ss_dssp HHHHHHCSEEEEECSSTTHHHHHHHHCSSC--EEESCSSSSCCHH-----------------------------------
T ss_pred HHHHHhCcEEEEEcCChHHHHHHHHhCCCC--EEeCCCCCCcCcH-----------------------------------
Q ss_pred ccceeeeccccccccCCCCCeEEEEeccCCCCCChHHHHHHHHHhHHHHhhhhccCCCchhhhhhhhhcCCccCCCCcEE
Q 015058 239 DETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLL 318 (414)
Q Consensus 239 ~~~~~~~~~~~~~~l~~~~~~~i~~vgrl~~~Kg~~~LleA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~ 318 (414)
..|++.+-+..+.. ...+++
T Consensus 134 -----------------------------------Q~LaDl~Ti~e~~g-------------------------~l~glk 153 (306)
T 4ekn_B 134 -----------------------------------QTLLDLYTIMREIG-------------------------RIDGIK 153 (306)
T ss_dssp -----------------------------------HHHHHHHHHHHHHS-------------------------CSTTCE
T ss_pred -----------------------------------HHHHHHHHHHHHhC-------------------------CcCCCE
Q ss_pred EEEEcCCCC---hHHHHHHHHHc-CCC-cEEEecCCCChhhHHHHHhhc
Q 015058 319 FIITGKGPD---KESYEEKIRRL-RLK-RVAFRTMWLSAEDYPLLLGSA 362 (414)
Q Consensus 319 liI~G~G~~---~e~l~~~i~~l-~l~-~V~f~g~~v~~ed~~~~l~~a 362 (414)
+.++|||.. -.++......+ |.+ ++.-..++.+.+++.......
T Consensus 154 va~vGD~~~~rva~Sl~~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~ 202 (306)
T 4ekn_B 154 IAFVGDLKYGRTVHSLVYALSLFENVEMYFVSPKELRLPKDIIEDLKAK 202 (306)
T ss_dssp EEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGGGCCCHHHHHHHHHT
T ss_pred EEEEcCCCCCcHHHHHHHHHHhcCCCEEEEECCcccccCHHHHHHHHHc
No 119
>4aaj_A N-(5'-phosphoribosyl)anthranilate isomerase; alpha/beta-barrel, hyperthermophilic, phosphoribo isomerase; 1.75A {Pyrococcus furiosus}
Probab=20.82 E-value=4.1e+02 Score=24.21 Aligned_cols=85 Identities=13% Similarity=-0.022 Sum_probs=41.6
Q ss_pred EEcCCCChHHHHHHHHHcCCCcEEEecCCCChhhHHHHHhhccEEEee--ccCCCCCCCch----h-HHHHHHcCCeEEE
Q 015058 321 ITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCL--HTSSSGLDLPM----K-VCYCWYSRYSLKL 393 (414)
Q Consensus 321 I~G~G~~~e~l~~~i~~l~l~~V~f~g~~v~~ed~~~~l~~aDl~V~~--~~s~~g~~lP~----k-l~Eama~G~Pvi~ 393 (414)
.+|-...-+++.+.+++.++..|++.| -.+.+.+..+-...++-|.- .-.. ....|. . +-++.....-.+.
T Consensus 74 ~v~v~v~~~ei~~~i~~~~ld~vQLHG-~E~~~~~~~l~~~~~~~viKa~~v~~-~~~~~~~~~~~~~~~~~~~~~d~~L 151 (228)
T 4aaj_A 74 LVSTMVGFSEWAMAIERTGAQYIQVHS-NALPQTIDTLKKEFGVFVMKAFRVPT-ISKNPEEDANRLLSEISRYNADMVL 151 (228)
T ss_dssp EEECCCCHHHHHHHHHHHTCSEEEECS-CCCHHHHHHHHHHHCCEEEEEEECCS-SCSCHHHHHHHHHHHHHHSCCSEEE
T ss_pred EEeccCchHHHHHHHHhccchheeccc-ccCHHHHHHHhhccCceEEEEEEecc-cccchhhhHHHHHHHHhccCCCEEc
Confidence 344444456677788888988899997 55666666555555554421 1111 111121 1 2223333445566
Q ss_pred eeeCCcccchhhhh
Q 015058 394 LWTCSVVGCLFVLF 407 (414)
Q Consensus 394 s~~~~~~~~~~~~~ 407 (414)
.|+.|=+|-.|+.-
T Consensus 152 lDs~GGtG~~fDW~ 165 (228)
T 4aaj_A 152 LDTGAGSGKLHDLR 165 (228)
T ss_dssp EEC-------CCCH
T ss_pred cCCCCCCcCcCChH
Confidence 67777777777654
No 120
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=20.13 E-value=2.2e+02 Score=26.46 Aligned_cols=53 Identities=17% Similarity=0.135 Sum_probs=31.7
Q ss_pred EEEEEeCCCCCChHHHHHHHHHHhhCCCcEEEEecCCCCCCcc-----cccCCCeEEEEee
Q 015058 7 ACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAA-----ILEHPSIHIHTMT 62 (414)
Q Consensus 7 ~~v~~~~d~~~~~r~~~~a~~La~~~g~eV~vv~~~~~~~~~~-----~~~~~~i~i~~v~ 62 (414)
+.|++.|.-|.-++ ..+..|.++ ||+|.+++...+..... .....+++++...
T Consensus 11 ~~IlVtGatG~iG~--~l~~~L~~~-g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~D 68 (346)
T 3i6i_A 11 GRVLIAGATGFIGQ--FVATASLDA-HRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGL 68 (346)
T ss_dssp CCEEEECTTSHHHH--HHHHHHHHT-TCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECC
T ss_pred CeEEEECCCcHHHH--HHHHHHHHC-CCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEee
Confidence 45777775443333 346788886 99999999765321111 1123677776655
No 121
>2qip_A Protein of unknown function VPA0982; APC85975, vibrio parahaemolyticus RIMD 2210633, STR genomics, PSI-2, protein structure initiative; 1.48A {Vibrio parahaemolyticus}
Probab=20.02 E-value=1.7e+02 Score=24.87 Aligned_cols=49 Identities=18% Similarity=0.234 Sum_probs=33.6
Q ss_pred CcEEEEEEcCCCChHHHHHHHHH-cCCCcEEEecCCCChh-hHHHHHhhccEEEee
Q 015058 315 PRLLFIITGKGPDKESYEEKIRR-LRLKRVAFRTMWLSAE-DYPLLLGSADLGVCL 368 (414)
Q Consensus 315 p~i~liI~G~G~~~e~l~~~i~~-l~l~~V~f~g~~v~~e-d~~~~l~~aDl~V~~ 368 (414)
.+.-+++.|||...+ +-+.+++ +|. +|...| +++ --..+.++||-|+.+
T Consensus 109 ~d~~vLvSgD~DF~p-lv~~lr~~~G~-~V~v~g---~~~~~s~~L~~~ad~fi~l 159 (165)
T 2qip_A 109 VDRVILVSGDGDFSL-LVERIQQRYNK-KVTVYG---VPRLTSQTLIDCADNFVAI 159 (165)
T ss_dssp CSEEEEECCCGGGHH-HHHHHHHHHCC-EEEEEE---CGGGSCHHHHHHSSEEEEC
T ss_pred CCEEEEEECChhHHH-HHHHHHHHcCc-EEEEEe---CCCcChHHHHHhCCEEEec
Confidence 467788899996655 4556677 585 577777 333 225678999999843
Done!