BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015059
(414 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8GT66|TIC40_PEA Protein TIC 40, chloroplastic OS=Pisum sativum GN=TIC40 PE=1 SV=1
Length = 436
Score = 436 bits (1122), Expect = e-121, Method: Compositional matrix adjust.
Identities = 251/435 (57%), Positives = 314/435 (72%), Gaps = 35/435 (8%)
Query: 1 MENLNMALVSSTSPKLVLNYTNFKHPTRGITGPRRSSSLALPFKLSTSRISASV-RAGP- 58
MENLN+ALVSS P L+L +++ K+ G R+S + F++S + S+ V RA
Sbjct: 1 MENLNLALVSSPKP-LLLGHSSSKNVFSG----RKSFTFGT-FRVSANSSSSHVTRAASK 54
Query: 59 -HQN-----GQVGAGGFASLTSSGGQQTSSVGVNPNLPMPPPSSNVGSPLFWVGVGVGLS 112
HQN G+V A FAS++SS GQ+T+SVGV+P L PPPS+ VGSPLFW+G+GVG S
Sbjct: 55 SHQNLKSVQGKVNAHDFASISSSNGQETTSVGVSPQLSPPPPST-VGSPLFWIGIGVGFS 113
Query: 113 ALFSFVASRLKQYAMQQALKGMMNQMNTQNKPFGNAAFPQGSPFPFPNPPASGPTTP--- 169
ALFS VASR+K+YAMQQA K MM QMNTQN PF + AF G PFPFP P ASGP TP
Sbjct: 114 ALFSVVASRVKKYAMQQAFKSMMGQMNTQNNPFDSGAFSSGPPFPFPMPSASGPATPAGF 173
Query: 170 ---------YPAASQPRFTMDIPATKVEAAT-ATDVEGKKEVKGETEVKEEPKKYAFVDV 219
+ASQ T+DIPATKVEAA A D+ VK E EVK EPKK AFVDV
Sbjct: 174 AGNQSQATSTRSASQSTVTVDIPATKVEAAAPAPDIN----VKEEVEVKNEPKKSAFVDV 229
Query: 220 SPEETLQKSSFDNFEDVKETSSSKDAQPPKD-SQNGAAFNYNAGSPFGGQSAKKEGRFLT 278
SPEET+QK++F+ F+DV E+SS K+A+ P + SQNG F G S +K L+
Sbjct: 230 SPEETVQKNAFERFKDVDESSSFKEARAPAEASQNGTPFKQGFGDSPSSPSERKSA--LS 287
Query: 279 VDTLEKLMEDPQVQKMVYPSLPEEMRNPASFKLMLQNPEYRKQLQEMLDGMCESGEFDGR 338
VD LEK+MEDP VQ+MVYP LPEEMRNP++FK M+QNPEYR+QL+ ML+ M E+D R
Sbjct: 288 VDALEKMMEDPTVQQMVYPYLPEEMRNPSTFKWMMQNPEYRQQLEAMLNNMGGGTEWDSR 347
Query: 339 VLDSLKNFDLNSAEVKQQFEQIGLTPEEVITKMMANPEIALGFQSPRVQAAIMECSQNPM 398
++D+LKNFDLNS +VKQQF+QIGL+P+EVI+K+MANP++A+ FQ+PRVQAAIM+CSQNPM
Sbjct: 348 MMDTLKNFDLNSPDVKQQFDQIGLSPQEVISKIMANPDVAMAFQNPRVQAAIMDCSQNPM 407
Query: 399 NIIKYQNDKEVFSDF 413
+I+KYQNDKEV F
Sbjct: 408 SIVKYQNDKEVMDVF 422
>sp|Q9FMD5|TIC40_ARATH Protein TIC 40, chloroplastic OS=Arabidopsis thaliana GN=TIC40 PE=1
SV=1
Length = 447
Score = 342 bits (877), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 228/436 (52%), Positives = 290/436 (66%), Gaps = 24/436 (5%)
Query: 1 MENLNMALVSSTSPKLVLNYTNFKHPTRGITG-PRRSSSLALPF-KLSTSRISASVRAGP 58
MENL + S++SPKL++ NF + TG RR+ ++ L K+S S S S + P
Sbjct: 1 MENLTLVSCSASSPKLLIG-CNFTSSLKNPTGFSRRTPNIVLRCSKISASAQSQSPSSRP 59
Query: 59 HQNGQV-----GAGGFASL-TSSGGQQTSSVGVNPNLPMPPPSSNVGSPLFWVGVGVGLS 112
G++ + FAS+ +SS QQT+SV PP SS +GSPLFW+GVGVGLS
Sbjct: 60 ENTGEIVVVKQRSKAFASIFSSSRDQQTTSVASPSVPVPPPSSSTIGSPLFWIGVGVGLS 119
Query: 113 ALFSFVASRLKQYAMQQALKGMMNQMNTQNKPFGNAAFPQGSPFPFPNPPASGPTTPYPA 172
ALFS+V S LK+YAMQ A+K MMNQMNTQN F N+ FP GSPFPFP PP + P +
Sbjct: 120 ALFSYVTSNLKKYAMQTAMKTMMNQMNTQNSQFNNSGFPSGSPFPFPFPPQTSPASSPFQ 179
Query: 173 ASQPRF--TMDIPATKVEAAT--------ATDVEGKK--EVKGETEVKEEPKKYAFVDVS 220
+ T+D+ ATKVE A D+E K V ++ K+E K YAF D+S
Sbjct: 180 SQSQSSGATVDVTATKVETPPSTKPKPTPAKDIEVDKPSVVLEASKEKKEEKNYAFEDIS 239
Query: 221 PEETLQKSSFDNFEDVKETSSSKDAQPPKDS-QNGA--AFNYNAGSPFGGQSAKKEGRFL 277
PEET ++S F N+ +V ET+S K+ + +D QNGA A A F K G L
Sbjct: 240 PEETTKESPFSNYAEVSETNSPKETRLFEDVLQNGAGPANGATASEVFQSLGGGKGGPGL 299
Query: 278 TVDTLEKLMEDPQVQKMVYPSLPEEMRNPASFKLMLQNPEYRKQLQEMLDGMCESGEFDG 337
+V+ LEK+MEDP VQKMVYP LPEEMRNP +FK ML+NP+YR+QLQ+ML+ M SGE+D
Sbjct: 300 SVEALEKMMEDPTVQKMVYPYLPEEMRNPETFKWMLKNPQYRQQLQDMLNNMSGSGEWDK 359
Query: 338 RVLDSLKNFDLNSAEVKQQFEQIGLTPEEVITKMMANPEIALGFQSPRVQAAIMECSQNP 397
R+ D+LKNFDLNS EVKQQF QIGLTPEEVI+K+M NP++A+ FQ+PRVQAA+MECS+NP
Sbjct: 360 RMTDTLKNFDLNSPEVKQQFNQIGLTPEEVISKIMENPDVAMAFQNPRVQAALMECSENP 419
Query: 398 MNIIKYQNDKEVFSDF 413
MNI+KYQNDKEV F
Sbjct: 420 MNIMKYQNDKEVMDVF 435
>sp|Q5ZLF0|F10A1_CHICK Hsc70-interacting protein OS=Gallus gallus GN=ST13 PE=2 SV=1
Length = 361
Score = 42.0 bits (97), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 29/44 (65%)
Query: 368 ITKMMANPEIALGFQSPRVQAAIMECSQNPMNIIKYQNDKEVFS 411
+ +++++PE+ Q P V AA + +QNP N+ KYQN+ +V S
Sbjct: 305 LNEILSDPEVLAAMQDPEVMAAFQDVAQNPANMSKYQNNPKVMS 348
>sp|P50503|F10A1_RAT Hsc70-interacting protein OS=Rattus norvegicus GN=St13 PE=1 SV=1
Length = 368
Score = 38.1 bits (87), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 28/44 (63%)
Query: 368 ITKMMANPEIALGFQSPRVQAAIMECSQNPMNIIKYQNDKEVFS 411
+ +++++PE+ Q P V A + +QNP N+ KYQN+ +V +
Sbjct: 312 LNEILSDPEVLAAMQDPEVMVAFQDVAQNPSNMSKYQNNPKVMN 355
>sp|P15705|STI1_YEAST Heat shock protein STI1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=STI1 PE=1 SV=1
Length = 589
Score = 38.1 bits (87), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 363 TPEEVITKMMANPEIALGFQSPRVQAAIMECSQNPMNIIKYQNDKEVF 410
TPEE + M +PE+A Q P +Q+ + + QNP + ++ + EVF
Sbjct: 526 TPEETYQRAMKDPEVAAIMQDPVMQSILQQAQQNPAALQEHMKNPEVF 573
>sp|O94489|EF3_SCHPO Elongation factor 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=tef3 PE=1 SV=1
Length = 1047
Score = 37.7 bits (86), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 7/102 (6%)
Query: 277 LTVDTLEKLMEDPQVQKMVYPSLPEEMRNPASFKLMLQNPEYRKQLQEMLDGMCESGE-F 335
+ +D + KL+EDPQV V P LP+ + K + +PE R +Q + + G
Sbjct: 273 VIIDNMSKLVEDPQV---VAPFLPKLLPGLYHIKDTIGDPECRSVVQRAITTLERVGNVV 329
Query: 336 DGRV--LDSLKNFDLNSAEVKQQFEQIGL-TPEEVITKMMAN 374
DG++ + + N ++ +K +I + T EEVI K +AN
Sbjct: 330 DGKIPEVSTAANPEVCLETLKAVLGEIKVPTNEEVIAKYVAN 371
>sp|Q5RF31|F10A1_PONAB Hsc70-interacting protein OS=Pongo abelii GN=ST13 PE=2 SV=1
Length = 369
Score = 36.2 bits (82), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 28/44 (63%)
Query: 368 ITKMMANPEIALGFQSPRVQAAIMECSQNPMNIIKYQNDKEVFS 411
+ +++++PE+ Q P V A + +QNP N+ KYQ++ +V +
Sbjct: 313 LNEILSDPEVLAAMQDPEVMVAFQDVAQNPANMSKYQSNPKVMN 356
>sp|P50502|F10A1_HUMAN Hsc70-interacting protein OS=Homo sapiens GN=ST13 PE=1 SV=2
Length = 369
Score = 36.2 bits (82), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 28/44 (63%)
Query: 368 ITKMMANPEIALGFQSPRVQAAIMECSQNPMNIIKYQNDKEVFS 411
+ +++++PE+ Q P V A + +QNP N+ KYQ++ +V +
Sbjct: 313 LNEILSDPEVLAAMQDPEVMVAFQDVAQNPANMSKYQSNPKVMN 356
>sp|Q99L47|F10A1_MOUSE Hsc70-interacting protein OS=Mus musculus GN=St13 PE=2 SV=1
Length = 371
Score = 35.8 bits (81), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 28/44 (63%)
Query: 368 ITKMMANPEIALGFQSPRVQAAIMECSQNPMNIIKYQNDKEVFS 411
+ +++++PE+ Q P V A + +QNP N+ KYQ++ +V +
Sbjct: 315 LNEILSDPEVLAAMQDPEVMVAFQDVAQNPSNMSKYQSNPKVMN 358
>sp|Q93YR3|F10AL_ARATH FAM10 family protein At4g22670 OS=Arabidopsis thaliana GN=At4g22670
PE=1 SV=1
Length = 441
Score = 35.4 bits (80), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 23/36 (63%)
Query: 369 TKMMANPEIALGFQSPRVQAAIMECSQNPMNIIKYQ 404
+K++ +PE+ F P V AA+ + +NP N+ K+Q
Sbjct: 386 SKILNDPELMTAFSDPEVMAALQDVMKNPANLAKHQ 421
>sp|Q8NFI4|F10A5_HUMAN Putative protein FAM10A5 OS=Homo sapiens GN=ST13P5 PE=5 SV=1
Length = 369
Score = 34.7 bits (78), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 27/44 (61%)
Query: 368 ITKMMANPEIALGFQSPRVQAAIMECSQNPMNIIKYQNDKEVFS 411
+ +++++PE Q P V A + +QNP N+ KYQ++ +V +
Sbjct: 313 LNEILSDPEALAAMQDPEVMVAFQDVAQNPANMSKYQSNPKVMN 356
>sp|Q9UPQ0|LIMC1_HUMAN LIM and calponin homology domains-containing protein 1 OS=Homo
sapiens GN=LIMCH1 PE=1 SV=4
Length = 1083
Score = 32.3 bits (72), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 47/112 (41%), Gaps = 14/112 (12%)
Query: 153 GSPFPFPNPPASGPTTPYPAASQPRFTMDIPATKVEAATATDVEGKKEVKGETEVKEEPK 212
GSP P A TP P SQP+ + D+ T V+GK V GET +EE K
Sbjct: 522 GSPSKTVTPKAVPMLTPKPY-SQPKNSQDVLKT-------FKVDGKVSVNGETVHREEEK 573
Query: 213 KYAFVDVSPEETLQKSSFDNFEDVKETSSSKDAQPPKDSQNGAAFNYNAGSP 264
+ V+P +L KS FE V S P + Q+ + N P
Sbjct: 574 ERECPTVAPAHSLTKSQM--FEGVARVHGS----PLELKQDNGSIEINIKKP 619
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.128 0.365
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 159,940,764
Number of Sequences: 539616
Number of extensions: 7141506
Number of successful extensions: 25386
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 148
Number of HSP's that attempted gapping in prelim test: 25089
Number of HSP's gapped (non-prelim): 405
length of query: 414
length of database: 191,569,459
effective HSP length: 120
effective length of query: 294
effective length of database: 126,815,539
effective search space: 37283768466
effective search space used: 37283768466
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 62 (28.5 bits)