Your job contains 1 sequence.
>015064
MYEFSSATRKTIASLNSSMAMTYYYATKPTWKIVTTDCTCSISSCCFNFFSNVTNQHSKT
LHFTNLTHIIKNKCTWVIKAKGNDEAIAHVKEKKNDNAQTTSESVQIITKRPFWKRVLFA
SKKIRSIFLLNVITIVYASDIPILKAAEEIMHPASFCAVRFVMSAIPFLPFVFWARDDVK
TRNAGIELGLWVSLGYFVEALGLLTSDAGRASFISLFTVIVVPLFDGMLGAIIPAHTWFG
VLISALGVGMLECSGSPPSVGDFLNFLSAIFFGIHMLRTERISRSTKKENFLPLLGYEIC
VVALLSTIWVLVGGWFDSSQDFDQSPWTWTMLWDWMVTFPWVPALYTGIFSTGICLWIEI
AAMRDVSATETAIIYGLEPLWGAGFAWFLLGERWSTAGWIGAALVLDVQIFLPR
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 015064
(414 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q48AQ1 - symbol:CPS_0094 "Membrane protein" spe... 237 1.2e-19 1
TIGR_CMR|CPS_0094 - symbol:CPS_0094 "membrane protein" sp... 237 1.2e-19 1
TIGR_CMR|BA_1622 - symbol:BA_1622 "transporter, EamA fami... 197 1.3e-13 1
UNIPROTKB|Q4KHB5 - symbol:PFL_1237 "Putative membrane pro... 143 1.6e-13 2
UNIPROTKB|Q3AES3 - symbol:CHY_0503 "Putative membrane pro... 155 3.0e-13 2
TIGR_CMR|CHY_0503 - symbol:CHY_0503 "putative membrane pr... 155 3.0e-13 2
UNIPROTKB|Q74FR1 - symbol:GSU0545 "Membrane protein, puta... 108 3.3e-10 2
TIGR_CMR|GSU_0545 - symbol:GSU_0545 "membrane protein, pu... 108 3.3e-10 2
UNIPROTKB|Q83C01 - symbol:CBU_1336 "Transporter, drug/met... 160 3.8e-09 1
TIGR_CMR|CBU_1336 - symbol:CBU_1336 "membrane protein, pu... 160 3.8e-09 1
UNIPROTKB|Q48GZ9 - symbol:PSPPH_3171 "Membrane protein, p... 97 8.7e-07 2
UNIPROTKB|Q746W1 - symbol:GSU3407 "Membrane protein, puta... 131 7.1e-06 1
TIGR_CMR|GSU_3407 - symbol:GSU_3407 "membrane protein, pu... 131 7.1e-06 1
UNIPROTKB|Q4KDG3 - symbol:PFL_2613 "Putative membrane pro... 127 2.2e-05 1
UNIPROTKB|Q4KGC4 - symbol:PFL_1583 "Transporter, drug/met... 114 3.4e-05 2
UNIPROTKB|Q74FN2 - symbol:GSU0574 "Membrane protein, puta... 124 5.0e-05 1
TIGR_CMR|GSU_0574 - symbol:GSU_0574 "membrane protein, pu... 124 5.0e-05 1
UNIPROTKB|Q9KRI5 - symbol:VC1656 "Putative uncharacterize... 122 7.2e-05 1
TIGR_CMR|VC_1656 - symbol:VC_1656 "membrane protein, puta... 122 7.2e-05 1
UNIPROTKB|Q5LTZ8 - symbol:SPO1262 "Membrane protein, puta... 121 0.00010 1
TIGR_CMR|SPO_1262 - symbol:SPO_1262 "membrane protein, pu... 121 0.00010 1
UNIPROTKB|Q87ZF9 - symbol:PSPTO_3470 "Membrane protein, p... 115 0.00053 1
UNIPROTKB|Q87VN4 - symbol:PSPTO_4901 "Membrane protein, p... 113 0.00078 1
>UNIPROTKB|Q48AQ1 [details] [associations]
symbol:CPS_0094 "Membrane protein" species:167879
"Colwellia psychrerythraea 34H" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG0697 HOGENOM:HOG000156003
RefSeq:YP_266862.1 STRING:Q48AQ1 GeneID:3521101 KEGG:cps:CPS_0094
PATRIC:21463607 OMA:YSTIAIF BioCyc:CPSY167879:GI48-197-MONOMER
Uniprot:Q48AQ1
Length = 322
Score = 237 (88.5 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 79/300 (26%), Positives = 139/300 (46%)
Query: 121 SKKIRSIFLLNVITIVYASDIPILKAAEEIMHPASFCAVRFVMSAIPFLPFVFWAR---- 176
S +I +I LL V I +PI A E+M +F A+RF ++ + LP +++ +
Sbjct: 5 SPRIATILLLIVCFIWGVEFVPI-DLAIEVMPTNTFNAIRFAVATLSMLPLLWFVQKKNK 63
Query: 177 ------DDVKTRNAGIELGLWVSLGYFVEALGLLTSDAGRASFISLFTVIVVPLFDGMLG 230
D V +G+ LG ++ +G++ + G+ + A FI+ V +VP+ ++
Sbjct: 64 GNSKPIDYVLLIRSGMLLGFFLFIGFYTQTEGMRFTTVTNAGFITGLCVPLVPVLGFLIF 123
Query: 231 A-IIPAHTWFGVLISALGVGMLECSGSPP-SVGDFLNFLSAIFFGIHMLRTERISRSTKK 288
++P W GV+ + G+ ML + GD L + A F H++ T+R +
Sbjct: 124 RNVVPKSVWIGVVTATAGLYMLTIGDKLVFNKGDILVLICAFGFAGHIIMTDRFVDNLP- 182
Query: 289 ENFLPLLGYEICVVALLSTIWVLVGGWFDSSQDF-DQSPWTW-TMLWDWMVTFPWVPALY 346
+PL +I V++ STI + +G D + D P +W L+ ++ F L
Sbjct: 183 --IIPLSIVQIFAVSIYSTIAIFIGP--DPVFYYQDAEPVSWYQQLFTPLMIFA---ILV 235
Query: 347 TGIFSTGICLWIEIAAMRDVSATETAIIYGLEPLWGAGFAWFLLGERWSTAGWIGAALVL 406
+GI T W + + + + A+I+ EP++ AW L E G IGA L+L
Sbjct: 236 SGILGTAYAFWAQSVSQTLLKPHKVALIFAAEPVFACIAAWVFLDEVLGEKGMIGAGLIL 295
>TIGR_CMR|CPS_0094 [details] [associations]
symbol:CPS_0094 "membrane protein" species:167879
"Colwellia psychrerythraea 34H" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0016020 "membrane" evidence=ISS] InterPro:IPR000620
Pfam:PF00892 GO:GO:0016020 EMBL:CP000083 GenomeReviews:CP000083_GR
eggNOG:COG0697 HOGENOM:HOG000156003 RefSeq:YP_266862.1
STRING:Q48AQ1 GeneID:3521101 KEGG:cps:CPS_0094 PATRIC:21463607
OMA:YSTIAIF BioCyc:CPSY167879:GI48-197-MONOMER Uniprot:Q48AQ1
Length = 322
Score = 237 (88.5 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 79/300 (26%), Positives = 139/300 (46%)
Query: 121 SKKIRSIFLLNVITIVYASDIPILKAAEEIMHPASFCAVRFVMSAIPFLPFVFWAR---- 176
S +I +I LL V I +PI A E+M +F A+RF ++ + LP +++ +
Sbjct: 5 SPRIATILLLIVCFIWGVEFVPI-DLAIEVMPTNTFNAIRFAVATLSMLPLLWFVQKKNK 63
Query: 177 ------DDVKTRNAGIELGLWVSLGYFVEALGLLTSDAGRASFISLFTVIVVPLFDGMLG 230
D V +G+ LG ++ +G++ + G+ + A FI+ V +VP+ ++
Sbjct: 64 GNSKPIDYVLLIRSGMLLGFFLFIGFYTQTEGMRFTTVTNAGFITGLCVPLVPVLGFLIF 123
Query: 231 A-IIPAHTWFGVLISALGVGMLECSGSPP-SVGDFLNFLSAIFFGIHMLRTERISRSTKK 288
++P W GV+ + G+ ML + GD L + A F H++ T+R +
Sbjct: 124 RNVVPKSVWIGVVTATAGLYMLTIGDKLVFNKGDILVLICAFGFAGHIIMTDRFVDNLP- 182
Query: 289 ENFLPLLGYEICVVALLSTIWVLVGGWFDSSQDF-DQSPWTW-TMLWDWMVTFPWVPALY 346
+PL +I V++ STI + +G D + D P +W L+ ++ F L
Sbjct: 183 --IIPLSIVQIFAVSIYSTIAIFIGP--DPVFYYQDAEPVSWYQQLFTPLMIFA---ILV 235
Query: 347 TGIFSTGICLWIEIAAMRDVSATETAIIYGLEPLWGAGFAWFLLGERWSTAGWIGAALVL 406
+GI T W + + + + A+I+ EP++ AW L E G IGA L+L
Sbjct: 236 SGILGTAYAFWAQSVSQTLLKPHKVALIFAAEPVFACIAAWVFLDEVLGEKGMIGAGLIL 295
>TIGR_CMR|BA_1622 [details] [associations]
symbol:BA_1622 "transporter, EamA family" species:198094
"Bacillus anthracis str. Ames" [GO:0005215 "transporter activity"
evidence=ISS] [GO:0006810 "transport" evidence=ISS]
InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
HOGENOM:HOG000156003 OMA:FIAYYLQ RefSeq:NP_844069.1
RefSeq:YP_018256.2 RefSeq:YP_027773.1 DNASU:1086271
EnsemblBacteria:EBBACT00000010146 EnsemblBacteria:EBBACT00000017799
EnsemblBacteria:EBBACT00000022879 GeneID:1086271 GeneID:2819538
GeneID:2851971 KEGG:ban:BA_1622 KEGG:bar:GBAA_1622 KEGG:bat:BAS1506
ProtClustDB:CLSK916303 BioCyc:BANT260799:GJAJ-1578-MONOMER
BioCyc:BANT261594:GJ7F-1643-MONOMER Uniprot:Q81SM6
Length = 303
Score = 197 (74.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 68/289 (23%), Positives = 142/289 (49%)
Query: 133 ITIVYASDIPILKAAEEIMHPASFCAVRFVMSAIP--FLPFVFW---ARDDVKTRN-AGI 186
++ ++ + +++ A + P +F +RF+ + I F+ +F ++ +K + AG+
Sbjct: 16 VSFIWGATFVVVQNAMSFVGPFTFNGIRFLFAGIILLFVQILFSKKASKQHIKQSSLAGL 75
Query: 187 ELGLWVSLGYFVEALGLLTSDAGRASFISLFTVIVVPLFDGM-LGAIIPAHTWFGVLISA 245
+G ++ +GY ++ GLL + + +A F++ ++++VP+ + L G+ ++
Sbjct: 76 IVGFFLCIGYVLQTFGLLYTTSSKAGFLTGLSIVMVPILSFIFLKQKATIFIVIGIAVAT 135
Query: 246 LGVGMLECSGS-PPSVGDFLNFLSAIFFGIHMLRTERISRSTKKENFLPLLGYEICVVAL 304
G+ +L S ++GD L A+ F H+L S KK + L L ++ V L
Sbjct: 136 AGLYLLTAGDSFQLNIGDILVLGCAVAFAAHILVNGFFS---KKISPLLLSTSQVLAVGL 192
Query: 305 LSTIWVLVGGWFDSSQDFDQSPWTWTMLWDWMVTFPWVPALY-TGIFSTGICLWIEIAAM 363
S+I + + D + F + WT + +F + AL+ T +F+T I +I+ +A
Sbjct: 193 FSSICAFL--FEDWEKLFSVALWTNS-------SFLF--ALFLTSLFATSIAFFIQTSAQ 241
Query: 364 RDVSATETAIIYGLEPLWGAGFAWFLLGERWSTAGWIGAALVLDVQIFL 412
+ S T AII+ +EP++ A + E+ S + IG + +F+
Sbjct: 242 KHTSPTRVAIIFAMEPVFAALTGVLVANEQLSISAIIGCLCIFLGMVFV 290
>UNIPROTKB|Q4KHB5 [details] [associations]
symbol:PFL_1237 "Putative membrane protein" species:220664
"Pseudomonas protegens Pf-5" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020 EMBL:CP000076
GenomeReviews:CP000076_GR eggNOG:COG0697 HOGENOM:HOG000156003
RefSeq:YP_258368.1 STRING:Q4KHB5 GeneID:3477414 KEGG:pfl:PFL_1237
PATRIC:19871683 OMA:STICAFL ProtClustDB:CLSK868107
BioCyc:PFLU220664:GIX8-1244-MONOMER Uniprot:Q4KHB5
Length = 301
Score = 143 (55.4 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 41/167 (24%), Positives = 82/167 (49%)
Query: 121 SKKIRSIFLLNVITIVYASDIPILKAAEEIMHPASFCAVRFVMSAIPFLPFVFWAR---- 176
S+ +R+ L+ + +++ S + + P + +RF + ++ LP V
Sbjct: 3 SQALRADVLMLITAVIWGSAFVAQTSGMNHIGPFLYSGLRFALGSLCLLPLVLRKTPTDR 62
Query: 177 --DDVKTRN---AGIELGLWVSLGYFVEALGLLTSDAGRASFISLFTVIVVPLFDGMLGA 231
+ + R G+ +GL ++LG ++ +GL+ + A FI+ VIVVPL ++G
Sbjct: 63 QPEPLLNRGLLLGGVLMGLALALGINLQQVGLMFTTVTNAGFITGLYVIVVPLLGLLIGH 122
Query: 232 IIPAHTWFGVLISALGVGMLECSGS-PPSVGDFLNFLSAIFFGIHML 277
TW G +++ +G+ +L S S + GD+L + A +G H++
Sbjct: 123 KTGLGTWLGAVLAVVGMFLLSVSDSFHVASGDWLQLIGAFVWGGHVI 169
Score = 99 (39.9 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 26/66 (39%), Positives = 37/66 (56%)
Query: 343 PA-LYTGIFSTGICLWIEIAAMRDVSATETAIIYGLEPLWGA-GFAWFLLGERWSTAGWI 400
PA LY G+ + GI +++ A +D A+ AII LE ++ A AW LL E G+
Sbjct: 215 PAILYGGVVAVGIGYTLQVIAQKDAIASHAAIILSLEAVFAAIAGAW-LLDESLQARGYF 273
Query: 401 GAALVL 406
G AL+L
Sbjct: 274 GCALML 279
>UNIPROTKB|Q3AES3 [details] [associations]
symbol:CHY_0503 "Putative membrane protein" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020
EMBL:CP000141 GenomeReviews:CP000141_GR eggNOG:COG0697
RefSeq:YP_359361.1 STRING:Q3AES3 GeneID:3727973 KEGG:chy:CHY_0503
PATRIC:21274157 HOGENOM:HOG000156003 OMA:LANIEPF
BioCyc:CHYD246194:GJCN-504-MONOMER Uniprot:Q3AES3
Length = 298
Score = 155 (59.6 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 50/198 (25%), Positives = 94/198 (47%)
Query: 121 SKKIRSIFLLNVITIVYASDIPILKAAEEIMHPASFCAVRFVMSAIPFLPFVFWARDDVK 180
+K++ + L V+T + + I+K + P SF + RF++S LP + ++
Sbjct: 5 TKQLLADISLIVVTAFWGTTFVIIKNILANIEPFSFLSFRFLLSTFFLLPLLL-QKEGFS 63
Query: 181 TRNA--GIELGLWVSLGYFVEALGLLTSDAGRASFISLFTVIVVPLFDGMLGA--IIPAH 236
+ G G ++ LGY ++ +GL + A + FI+ V++VP+ +L + P
Sbjct: 64 PKGVFFGSIAGFFLWLGYILQTIGLKYTSAANSGFITGLAVVMVPVLSSILNKKPVTPG- 122
Query: 237 TWFGVLISALGVGMLECSGSPP-SVGDFLNFLSAIFFGIHMLRTERISRSTKKENFLPLL 295
FG +S LG+ ++ + GD L A+FF + ++ ER S + + L
Sbjct: 123 VIFGTGLSFLGLFIMSFDFKAGFNTGDLLTLAGALFFSMQIVSVERFSPNFSATSLT--L 180
Query: 296 GYEICVVALLS---TIWV 310
G +I V +LS +W+
Sbjct: 181 G-QIATVGVLSLPAALWL 197
Score = 82 (33.9 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 345 LYTGIFSTGICLWIEIAAMRDVSATETAIIYGLEPLWGAGFAWFLLGERWSTAGWIGAAL 404
++T IF+T + ++ A + SA+ A+I+ LEP++ FA GE IGA
Sbjct: 213 VFTAIFATVLAFLVQSKAQQFTSASHVALIFTLEPVFALLFAVLFGGESLVAKQGIGAFF 272
Query: 405 VL 406
+L
Sbjct: 273 IL 274
>TIGR_CMR|CHY_0503 [details] [associations]
symbol:CHY_0503 "putative membrane protein" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0016020 "membrane" evidence=ISS]
InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020 EMBL:CP000141
GenomeReviews:CP000141_GR eggNOG:COG0697 RefSeq:YP_359361.1
STRING:Q3AES3 GeneID:3727973 KEGG:chy:CHY_0503 PATRIC:21274157
HOGENOM:HOG000156003 OMA:LANIEPF BioCyc:CHYD246194:GJCN-504-MONOMER
Uniprot:Q3AES3
Length = 298
Score = 155 (59.6 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 50/198 (25%), Positives = 94/198 (47%)
Query: 121 SKKIRSIFLLNVITIVYASDIPILKAAEEIMHPASFCAVRFVMSAIPFLPFVFWARDDVK 180
+K++ + L V+T + + I+K + P SF + RF++S LP + ++
Sbjct: 5 TKQLLADISLIVVTAFWGTTFVIIKNILANIEPFSFLSFRFLLSTFFLLPLLL-QKEGFS 63
Query: 181 TRNA--GIELGLWVSLGYFVEALGLLTSDAGRASFISLFTVIVVPLFDGMLGA--IIPAH 236
+ G G ++ LGY ++ +GL + A + FI+ V++VP+ +L + P
Sbjct: 64 PKGVFFGSIAGFFLWLGYILQTIGLKYTSAANSGFITGLAVVMVPVLSSILNKKPVTPG- 122
Query: 237 TWFGVLISALGVGMLECSGSPP-SVGDFLNFLSAIFFGIHMLRTERISRSTKKENFLPLL 295
FG +S LG+ ++ + GD L A+FF + ++ ER S + + L
Sbjct: 123 VIFGTGLSFLGLFIMSFDFKAGFNTGDLLTLAGALFFSMQIVSVERFSPNFSATSLT--L 180
Query: 296 GYEICVVALLS---TIWV 310
G +I V +LS +W+
Sbjct: 181 G-QIATVGVLSLPAALWL 197
Score = 82 (33.9 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 345 LYTGIFSTGICLWIEIAAMRDVSATETAIIYGLEPLWGAGFAWFLLGERWSTAGWIGAAL 404
++T IF+T + ++ A + SA+ A+I+ LEP++ FA GE IGA
Sbjct: 213 VFTAIFATVLAFLVQSKAQQFTSASHVALIFTLEPVFALLFAVLFGGESLVAKQGIGAFF 272
Query: 405 VL 406
+L
Sbjct: 273 IL 274
>UNIPROTKB|Q74FR1 [details] [associations]
symbol:GSU0545 "Membrane protein, putative" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020 EMBL:AE017180
GenomeReviews:AE017180_GR RefSeq:NP_951603.1 GeneID:2685783
KEGG:gsu:GSU0545 PATRIC:22023847 HOGENOM:HOG000131948 OMA:HIISVSK
ProtClustDB:CLSK827915 BioCyc:GSUL243231:GH27-529-MONOMER
Uniprot:Q74FR1
Length = 308
Score = 108 (43.1 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 24/66 (36%), Positives = 34/66 (51%)
Query: 341 WVPALYTGIFSTGICLWIEIAAMRDVSATETAIIYGLEPLWGAGFAWFLLGERWSTAGWI 400
W A Y +F T IC ++ A R + T +IY L+P+W F F+LGER +
Sbjct: 215 WSLA-YCALFPTVICFTLQNAYQRFTTPTRAGLIYTLDPVWSMLFGVFILGERLTPRELA 273
Query: 401 GAALVL 406
G L+L
Sbjct: 274 GCVLIL 279
Score = 107 (42.7 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 46/199 (23%), Positives = 85/199 (42%)
Query: 123 KIRSIFLLNVITIVYASDIPILKAAEEIMHPASFCAVRFVMSAIPF----LPFVFWARDD 178
K+ +I L T+++ K + P F RF ++A+ LP +
Sbjct: 13 KVTAILLFT--TLMWGGSFLFNKIGMREVPPVHFFFFRFALAALLMGGVCLPRLARLNRH 70
Query: 179 VKTRNAGIELGLWVSLGYFVEALGLLTSDAGRASFISLFTVIVVPLFDGMLGAI-IPAHT 237
+ R A + L L FV LG+ + RA +++ V+ +PL L + T
Sbjct: 71 IAVRGAVVGLALAAVNLTFV--LGVSGTTISRAGYLNNLFVLFIPLLTFALWRERVDRVT 128
Query: 238 WFGVLISALGVGMLECSGSPP-SVGDFLNFLSAIFFGIHMLRTERISRSTKKENFLPLLG 296
+ G+ ++ +G+ L G+ + GD L+ + A+F IH++ R+ R E+ +
Sbjct: 129 FGGIALAVVGLWALASGGAEGFNQGDLLSTVCALFIAIHIIAVSRVLRD---EDVYLVTF 185
Query: 297 YEICVVALLSTIWVLVGGW 315
+ VA + + LV W
Sbjct: 186 VQFVTVAAVGLVLCLVLPW 204
>TIGR_CMR|GSU_0545 [details] [associations]
symbol:GSU_0545 "membrane protein, putative"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020
EMBL:AE017180 GenomeReviews:AE017180_GR RefSeq:NP_951603.1
GeneID:2685783 KEGG:gsu:GSU0545 PATRIC:22023847
HOGENOM:HOG000131948 OMA:HIISVSK ProtClustDB:CLSK827915
BioCyc:GSUL243231:GH27-529-MONOMER Uniprot:Q74FR1
Length = 308
Score = 108 (43.1 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 24/66 (36%), Positives = 34/66 (51%)
Query: 341 WVPALYTGIFSTGICLWIEIAAMRDVSATETAIIYGLEPLWGAGFAWFLLGERWSTAGWI 400
W A Y +F T IC ++ A R + T +IY L+P+W F F+LGER +
Sbjct: 215 WSLA-YCALFPTVICFTLQNAYQRFTTPTRAGLIYTLDPVWSMLFGVFILGERLTPRELA 273
Query: 401 GAALVL 406
G L+L
Sbjct: 274 GCVLIL 279
Score = 107 (42.7 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 46/199 (23%), Positives = 85/199 (42%)
Query: 123 KIRSIFLLNVITIVYASDIPILKAAEEIMHPASFCAVRFVMSAIPF----LPFVFWARDD 178
K+ +I L T+++ K + P F RF ++A+ LP +
Sbjct: 13 KVTAILLFT--TLMWGGSFLFNKIGMREVPPVHFFFFRFALAALLMGGVCLPRLARLNRH 70
Query: 179 VKTRNAGIELGLWVSLGYFVEALGLLTSDAGRASFISLFTVIVVPLFDGMLGAI-IPAHT 237
+ R A + L L FV LG+ + RA +++ V+ +PL L + T
Sbjct: 71 IAVRGAVVGLALAAVNLTFV--LGVSGTTISRAGYLNNLFVLFIPLLTFALWRERVDRVT 128
Query: 238 WFGVLISALGVGMLECSGSPP-SVGDFLNFLSAIFFGIHMLRTERISRSTKKENFLPLLG 296
+ G+ ++ +G+ L G+ + GD L+ + A+F IH++ R+ R E+ +
Sbjct: 129 FGGIALAVVGLWALASGGAEGFNQGDLLSTVCALFIAIHIIAVSRVLRD---EDVYLVTF 185
Query: 297 YEICVVALLSTIWVLVGGW 315
+ VA + + LV W
Sbjct: 186 VQFVTVAAVGLVLCLVLPW 204
>UNIPROTKB|Q83C01 [details] [associations]
symbol:CBU_1336 "Transporter, drug/metabolite exporter
family" species:227377 "Coxiella burnetii RSA 493" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020
EMBL:AE016828 GenomeReviews:AE016828_GR RefSeq:NP_820325.1
GeneID:1209242 KEGG:cbu:CBU_1336 PATRIC:17931409
HOGENOM:HOG000066578 OMA:HIFFTSE ProtClustDB:CLSK914708
BioCyc:CBUR227377:GJ7S-1327-MONOMER Uniprot:Q83C01
Length = 305
Score = 160 (61.4 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 68/288 (23%), Positives = 129/288 (44%)
Query: 124 IRSIFLLNVITIVYASDIPILKAAEEIMHPASFCAVRFVMSAIPFLPFVFWARDDVKTRN 183
+R+ L IT+++ P++K A + P+ F +R ++++ LP +F R KT
Sbjct: 5 VRAHLALFFITLLWGLTFPLIKDALGSISPSLFVVLRTSVASLILLPVIFLQRK--KTTF 62
Query: 184 AGIE----LGLWVSLGYFVEALGLLTSDAGRASFISLFTVIVVPLFDGMLGAIIPAHTWF 239
I+ LG + S Y +++GL + + ++FI+ +V+VVP + P WF
Sbjct: 63 TMIKWTLVLGFFQSATYVFQSIGLESISSADSAFITALSVVVVPFLALIFLKSKPR--WF 120
Query: 240 GVLISALGVG-MLECSGSPPSVGDFLNFLSAIFFGIHMLRTERISRSTKKENFLPLLGYE 298
+ + L +G + +G+ + N F+ + + T + F L E
Sbjct: 121 DFVTALLCLGGIFILTGA-----NIFNMKGGDFWTLGCAVAYALYIVTLQA-FSKKLKPE 174
Query: 299 ICVVALLSTIWVLVGGWFDSSQDFDQSPWTWTMLWDWMVTFPWVPALYTGIFSTGICLWI 358
++AL + +L F F + T ++ W V + L+ IF+TG+ ++
Sbjct: 175 DTILAL--SYQILFSLIFPLLTAFYK---TTASIFSWPVI---IAVLFCAIFATGLVFYL 226
Query: 359 EIAAMRDVSATETAIIYGLEPLWGAGFAWFLLGERWSTAGWIGAALVL 406
++ R + + +IY EP++ A F + L GE IG L+L
Sbjct: 227 QLRYQRYIPVSRAVLIYAFEPIFAALFGYLLNGEAIYLNTVIGGFLIL 274
>TIGR_CMR|CBU_1336 [details] [associations]
symbol:CBU_1336 "membrane protein, putative"
species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0016020 "membrane" evidence=ISS]
InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020 EMBL:AE016828
GenomeReviews:AE016828_GR RefSeq:NP_820325.1 GeneID:1209242
KEGG:cbu:CBU_1336 PATRIC:17931409 HOGENOM:HOG000066578 OMA:HIFFTSE
ProtClustDB:CLSK914708 BioCyc:CBUR227377:GJ7S-1327-MONOMER
Uniprot:Q83C01
Length = 305
Score = 160 (61.4 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 68/288 (23%), Positives = 129/288 (44%)
Query: 124 IRSIFLLNVITIVYASDIPILKAAEEIMHPASFCAVRFVMSAIPFLPFVFWARDDVKTRN 183
+R+ L IT+++ P++K A + P+ F +R ++++ LP +F R KT
Sbjct: 5 VRAHLALFFITLLWGLTFPLIKDALGSISPSLFVVLRTSVASLILLPVIFLQRK--KTTF 62
Query: 184 AGIE----LGLWVSLGYFVEALGLLTSDAGRASFISLFTVIVVPLFDGMLGAIIPAHTWF 239
I+ LG + S Y +++GL + + ++FI+ +V+VVP + P WF
Sbjct: 63 TMIKWTLVLGFFQSATYVFQSIGLESISSADSAFITALSVVVVPFLALIFLKSKPR--WF 120
Query: 240 GVLISALGVG-MLECSGSPPSVGDFLNFLSAIFFGIHMLRTERISRSTKKENFLPLLGYE 298
+ + L +G + +G+ + N F+ + + T + F L E
Sbjct: 121 DFVTALLCLGGIFILTGA-----NIFNMKGGDFWTLGCAVAYALYIVTLQA-FSKKLKPE 174
Query: 299 ICVVALLSTIWVLVGGWFDSSQDFDQSPWTWTMLWDWMVTFPWVPALYTGIFSTGICLWI 358
++AL + +L F F + T ++ W V + L+ IF+TG+ ++
Sbjct: 175 DTILAL--SYQILFSLIFPLLTAFYK---TTASIFSWPVI---IAVLFCAIFATGLVFYL 226
Query: 359 EIAAMRDVSATETAIIYGLEPLWGAGFAWFLLGERWSTAGWIGAALVL 406
++ R + + +IY EP++ A F + L GE IG L+L
Sbjct: 227 QLRYQRYIPVSRAVLIYAFEPIFAALFGYLLNGEAIYLNTVIGGFLIL 274
>UNIPROTKB|Q48GZ9 [details] [associations]
symbol:PSPPH_3171 "Membrane protein, putative"
species:264730 "Pseudomonas syringae pv. phaseolicola 1448A"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000620 Pfam:PF00892
GO:GO:0016020 EMBL:CP000058 GenomeReviews:CP000058_GR
eggNOG:COG0697 HOGENOM:HOG000156003 RefSeq:YP_275334.1
STRING:Q48GZ9 GeneID:3557504 KEGG:psp:PSPPH_3171 PATRIC:19975722
OMA:FIAYYLQ ProtClustDB:CLSK908833 Uniprot:Q48GZ9
Length = 307
Score = 97 (39.2 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 34/148 (22%), Positives = 71/148 (47%)
Query: 129 LLNVITIVYASDIPILKAAEEIMHPASFCAVRFVMSAIPFLPFVFWARDDVK--TRNAGI 186
+L +IT+++ +++ A + P F +RF +A+ F + AG+
Sbjct: 16 VLILITMLWGGTFLLVQHALTVSGPMLFVGLRFAAAALIVALFSMKVLRGLTFLELKAGV 75
Query: 187 ELGLWVSLGYFVEALGLLTSDAGRASFISLFTVIVVPLFDGM-LGAIIPAHTWFGVLISA 245
+G + LGY ++ +GL T + +++FI+ V VPL + LG G+L++
Sbjct: 76 FIGTAIMLGYGLQTIGLQTIPSSQSAFITALYVPCVPLLQWLVLGRRPGLMPTLGILLAF 135
Query: 246 LGVGMLEC-SGSPPSV--GDFLNFLSAI 270
G+ ++ G+ + G+ + +SA+
Sbjct: 136 TGLMLISGPQGASLQLNSGEIVTLISAV 163
Score = 86 (35.3 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 24/70 (34%), Positives = 35/70 (50%)
Query: 339 FPWVPALYT-GIFSTGICLWIEIA-AMRDVSATETAIIYGLEPLWGAGFAWFLLGERWST 396
F W+ L G+ + + I + A + VS T +IY EP+W AG L GER
Sbjct: 210 FSWLLVLSAVGLGAMSAIIQIAMNWAQKSVSPTRATVIYAGEPVW-AGIVGRLAGERLPG 268
Query: 397 AGWIGAALVL 406
+GAAL++
Sbjct: 269 IALLGAALIV 278
>UNIPROTKB|Q746W1 [details] [associations]
symbol:GSU3407 "Membrane protein, putative" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020 EMBL:AE017180
GenomeReviews:AE017180_GR HOGENOM:HOG000156003 RefSeq:NP_954447.1
GeneID:2686636 KEGG:gsu:GSU3407 PATRIC:22029673 OMA:TQASIAF
ProtClustDB:CLSK2306827 BioCyc:GSUL243231:GH27-3381-MONOMER
Uniprot:Q746W1
Length = 292
Score = 131 (51.2 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 73/288 (25%), Positives = 121/288 (42%)
Query: 123 KIRSIFLLNVITIVYASDIPILKAAEEIMHPASFCAVRFVMSAIPFLPFVFWARDDVKTR 182
K ++I L + T + I+K A + F A RF+M+ + +PF R + +
Sbjct: 3 KAKAIVALLLTTFFWGITFTIVKDAVAQVDVFVFLAQRFLMAVVLLVPFCACRRVPLTMQ 62
Query: 183 NAGIELGLWVSLGYFVE-ALGLLTSDAGRASFISLFTVIVVPLFDGMLGAIIPAHTWF-G 240
+ GL++ L F A + AS T + V L MLGA++ G
Sbjct: 63 T--VRHGLFLGLFLFGSYAFQTMALRFTTASNTGFLTGLSVVLVP-MLGALLFRQAVSQG 119
Query: 241 VLIS-ALGV-GMLECSGSPPSVGDFLNFLSAIFFGIHMLRTERISRSTKKENFLPLLGYE 298
+ AL V G+ + V + + L+AI L + + + L +
Sbjct: 120 IKWGVALAVPGLFLLCTNGAFVLNIGDMLAAICAVCVSLHLILTGKFARDNDVWWLTAMQ 179
Query: 299 ICVVALLSTIWVLVGGWFDSSQDFDQSPWTWTMLWDWMVTFPWVPALYTGIFSTGICLWI 358
+ VALLS + VGG TM W + W L +F+T +
Sbjct: 180 LSTVALLSFLVAEVGGHR-------------TMAWHPEIL--WA-LLICAVFATVFAFLV 223
Query: 359 EIAAMRDVSATETAIIYGLEPLWGAGFAWFLLGERWSTAGWIGAALVL 406
+ + R +S TA+I+ LEP++ A +A++ ER T G++GA L+L
Sbjct: 224 QTSMQRFLSPAHTALIFCLEPVFAALYAFWAADERLGTLGYLGALLIL 271
>TIGR_CMR|GSU_3407 [details] [associations]
symbol:GSU_3407 "membrane protein, putative"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020
EMBL:AE017180 GenomeReviews:AE017180_GR HOGENOM:HOG000156003
RefSeq:NP_954447.1 GeneID:2686636 KEGG:gsu:GSU3407 PATRIC:22029673
OMA:TQASIAF ProtClustDB:CLSK2306827
BioCyc:GSUL243231:GH27-3381-MONOMER Uniprot:Q746W1
Length = 292
Score = 131 (51.2 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 73/288 (25%), Positives = 121/288 (42%)
Query: 123 KIRSIFLLNVITIVYASDIPILKAAEEIMHPASFCAVRFVMSAIPFLPFVFWARDDVKTR 182
K ++I L + T + I+K A + F A RF+M+ + +PF R + +
Sbjct: 3 KAKAIVALLLTTFFWGITFTIVKDAVAQVDVFVFLAQRFLMAVVLLVPFCACRRVPLTMQ 62
Query: 183 NAGIELGLWVSLGYFVE-ALGLLTSDAGRASFISLFTVIVVPLFDGMLGAIIPAHTWF-G 240
+ GL++ L F A + AS T + V L MLGA++ G
Sbjct: 63 T--VRHGLFLGLFLFGSYAFQTMALRFTTASNTGFLTGLSVVLVP-MLGALLFRQAVSQG 119
Query: 241 VLIS-ALGV-GMLECSGSPPSVGDFLNFLSAIFFGIHMLRTERISRSTKKENFLPLLGYE 298
+ AL V G+ + V + + L+AI L + + + L +
Sbjct: 120 IKWGVALAVPGLFLLCTNGAFVLNIGDMLAAICAVCVSLHLILTGKFARDNDVWWLTAMQ 179
Query: 299 ICVVALLSTIWVLVGGWFDSSQDFDQSPWTWTMLWDWMVTFPWVPALYTGIFSTGICLWI 358
+ VALLS + VGG TM W + W L +F+T +
Sbjct: 180 LSTVALLSFLVAEVGGHR-------------TMAWHPEIL--WA-LLICAVFATVFAFLV 223
Query: 359 EIAAMRDVSATETAIIYGLEPLWGAGFAWFLLGERWSTAGWIGAALVL 406
+ + R +S TA+I+ LEP++ A +A++ ER T G++GA L+L
Sbjct: 224 QTSMQRFLSPAHTALIFCLEPVFAALYAFWAADERLGTLGYLGALLIL 271
>UNIPROTKB|Q4KDG3 [details] [associations]
symbol:PFL_2613 "Putative membrane protein" species:220664
"Pseudomonas protegens Pf-5" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020 EMBL:CP000076
eggNOG:COG0697 HOGENOM:HOG000156003 ProtClustDB:CLSK908833
RefSeq:YP_259720.2 GeneID:3476523 KEGG:pfl:PFL_2613 PATRIC:19874511
BioCyc:PFLU220664:GIX8-2627-MONOMER Uniprot:Q4KDG3
Length = 305
Score = 127 (49.8 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 69/297 (23%), Positives = 126/297 (42%)
Query: 119 FASKKIRSIFLLNVITIVYASDIPILKAAEEIMHPASFCAVRFVMSAIPFLPFVF-WARD 177
F K ++ +L IT+++ +++ A + P F +RF +A F R
Sbjct: 11 FKLSKAEAVLVL--ITMIWGGTFLLVQNAMSVSGPMFFVGLRFAAAACMVGAFSLRHLRG 68
Query: 178 -DVKTRNAGIELGLWVSLGYFVEALGLLTSDAGRASFISLFTVIVVPL----FDGMLGAI 232
+ AG +G + LGY ++ +GL + + +++FI+ V VPL F G +
Sbjct: 69 LTLFELRAGAFIGTAIMLGYGLQTVGLQSIPSSQSAFITALYVPFVPLLQWLFMGKRPGL 128
Query: 233 IPAHTWFGVLISALGVGMLECSGSPP---SVGDFLNFLSAIFFGIHMLRTERISRSTKKE 289
+P+ G++++ G+ +L S G+ +S + ++ IS +
Sbjct: 129 LPS---IGIMLAFTGLMLLSGPNGASLDFSPGEIATLISTVAIAAEIIL---ISSFGGRV 182
Query: 290 NFLPLLGYEICVVALLSTIWVLVGGWFDSSQDFDQSPWTWTMLWDWMVTFPWVPALYTGI 349
+ + ++ V +LL+ V G ++ F +W +L AL G
Sbjct: 183 DVRRVTVVQLAVTSLLAFAMVWPTG--EALPGF-----SWLLL---------ASALGLGA 226
Query: 350 FSTGICLWIEIAAMRDVSATETAIIYGLEPLWGAGFAWFLLGERWSTAGWIGAALVL 406
S I L + A + VS T +IY EP+W AG + GER +G AL++
Sbjct: 227 ASAVIQLAMNWA-QKSVSPTRATLIYAGEPVW-AGIVGRIAGERLPGLALLGGALIV 281
>UNIPROTKB|Q4KGC4 [details] [associations]
symbol:PFL_1583 "Transporter, drug/metabolite exporter
family" species:220664 "Pseudomonas protegens Pf-5" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020
EMBL:CP000076 eggNOG:COG0697 HOGENOM:HOG000287161
RefSeq:YP_258709.2 GeneID:3476491 KEGG:pfl:PFL_1583 PATRIC:19872389
ProtClustDB:CLSK867829 BioCyc:PFLU220664:GIX8-1591-MONOMER
Uniprot:Q4KGC4
Length = 297
Score = 114 (45.2 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 24/73 (32%), Positives = 40/73 (54%)
Query: 334 DWMVTFPWVPALYTGIFSTGICLWIEIAAMRDVSATETAIIYGLEPLWGAGFAWFLLGER 393
DW+ W+ L GIF TG+ + +A++ + A A+++ LEP++G AW L GE
Sbjct: 206 DWL----WISLL--GIFCTGLAHSLFVASLAVIKARTAAVVFALEPVYGITVAWLLFGEN 259
Query: 394 WSTAGWIGAALVL 406
+ G AL++
Sbjct: 260 PTLRMLFGGALII 272
Score = 51 (23.0 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 184 AGIEL-GLWVSLGYFVEALGLLTSDAGRASFISLFTVIV 221
+G+ L G WVS V+ G+ + G ASF + FTVI+
Sbjct: 72 SGLLLAGHWVSFFVAVKVAGVAIATLGFASFPA-FTVIL 109
>UNIPROTKB|Q74FN2 [details] [associations]
symbol:GSU0574 "Membrane protein, putative" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020 EMBL:AE017180
GenomeReviews:AE017180_GR HOGENOM:HOG000253119 RefSeq:NP_951632.1
GeneID:2685710 KEGG:gsu:GSU0574 PATRIC:22023897 OMA:TTAFICF
ProtClustDB:CLSK924416 BioCyc:GSUL243231:GH27-612-MONOMER
Uniprot:Q74FN2
Length = 308
Score = 124 (48.7 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 31/80 (38%), Positives = 42/80 (52%)
Query: 330 TMLWDWMV-TFP---WVPALYTGIFSTGICLWIEIAAMRDVSATETAIIYGLEPLWGAGF 385
T L D +V T+P WV LY G+ T + + +A MR +AT +I LEPL
Sbjct: 210 TALADGLVLTYPAAGWVLLLYLGVVPTALAYALFLAGMRTTTATAASICTLLEPLVSTVL 269
Query: 386 AWFLLGERWSTAGWIGAALV 405
AW + GER G +GA L+
Sbjct: 270 AWLIFGERLGPLGAVGAVLL 289
>TIGR_CMR|GSU_0574 [details] [associations]
symbol:GSU_0574 "membrane protein, putative"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020
EMBL:AE017180 GenomeReviews:AE017180_GR HOGENOM:HOG000253119
RefSeq:NP_951632.1 GeneID:2685710 KEGG:gsu:GSU0574 PATRIC:22023897
OMA:TTAFICF ProtClustDB:CLSK924416
BioCyc:GSUL243231:GH27-612-MONOMER Uniprot:Q74FN2
Length = 308
Score = 124 (48.7 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 31/80 (38%), Positives = 42/80 (52%)
Query: 330 TMLWDWMV-TFP---WVPALYTGIFSTGICLWIEIAAMRDVSATETAIIYGLEPLWGAGF 385
T L D +V T+P WV LY G+ T + + +A MR +AT +I LEPL
Sbjct: 210 TALADGLVLTYPAAGWVLLLYLGVVPTALAYALFLAGMRTTTATAASICTLLEPLVSTVL 269
Query: 386 AWFLLGERWSTAGWIGAALV 405
AW + GER G +GA L+
Sbjct: 270 AWLIFGERLGPLGAVGAVLL 289
>UNIPROTKB|Q9KRI5 [details] [associations]
symbol:VC1656 "Putative uncharacterized protein VC1656"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000620 Pfam:PF00892
GO:GO:0016020 GenomeReviews:AE003852_GR EMBL:AE004244 PIR:B82172
RefSeq:NP_231293.1 DNASU:2613787 GeneID:2613787 KEGG:vch:VC1656
PATRIC:20082372 OMA:SEGAFIM ProtClustDB:CLSK874480 Uniprot:Q9KRI5
Length = 287
Score = 122 (48.0 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 58/259 (22%), Positives = 110/259 (42%)
Query: 129 LLNVITIVYASDIPILKAAEEIMHPASFCAVRFVMSAIPFLPFVFWARDDVKTR----NA 184
LL V T++ A K A + + P F +RF+ +++ LPF A + +
Sbjct: 10 LLVVTTLLAAGGWVFSKQAIQELPPFGFIGLRFIAASLCLLPFCLNALKQASRQACFQSM 69
Query: 185 GIELGLWVSLGYFVEALGLLTSDAGRASFISLFTVIVVPLFDGMLGAIIPAHT-WFGVLI 243
G+ + L SL ++ A+ + + G +FI +++ VPL + P W + +
Sbjct: 70 GVGVLLAASLFCWIHAISI-SDTLGEGAFIMSLSMLFVPLLAWPIFGQRPIRAFWLSLPV 128
Query: 244 SALGVGMLECSGSPPSVGDFLNFLSA-IFFGIHMLRTERISRSTKKENFLPLLGYEICVV 302
+ +G+ +L +G+ + L FL+A +H R S LP +
Sbjct: 129 AVVGLFLLAWNGTWQFAANQLWFLAASCCLALHFNFNSRFSSQ------LPPM------- 175
Query: 303 ALLSTIWVLVGGWFDSSQDFDQSPWTWTMLWDWMVTFPWVPALYTGIFSTGICLWIEIAA 362
LL+T+ + G + + W T+ VT+ W AL + +T + ++
Sbjct: 176 -LLTTLQLFTAGCLGITLSWLTESWPATIS---PVTWKWF-ALSV-LLATSLRYLMQTMG 229
Query: 363 MRDVSATETAIIYGLEPLW 381
+ + T A++ LEP+W
Sbjct: 230 QKSANPTNAALLMLLEPVW 248
>TIGR_CMR|VC_1656 [details] [associations]
symbol:VC_1656 "membrane protein, putative" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020
GenomeReviews:AE003852_GR EMBL:AE004244 PIR:B82172
RefSeq:NP_231293.1 DNASU:2613787 GeneID:2613787 KEGG:vch:VC1656
PATRIC:20082372 OMA:SEGAFIM ProtClustDB:CLSK874480 Uniprot:Q9KRI5
Length = 287
Score = 122 (48.0 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 58/259 (22%), Positives = 110/259 (42%)
Query: 129 LLNVITIVYASDIPILKAAEEIMHPASFCAVRFVMSAIPFLPFVFWARDDVKTR----NA 184
LL V T++ A K A + + P F +RF+ +++ LPF A + +
Sbjct: 10 LLVVTTLLAAGGWVFSKQAIQELPPFGFIGLRFIAASLCLLPFCLNALKQASRQACFQSM 69
Query: 185 GIELGLWVSLGYFVEALGLLTSDAGRASFISLFTVIVVPLFDGMLGAIIPAHT-WFGVLI 243
G+ + L SL ++ A+ + + G +FI +++ VPL + P W + +
Sbjct: 70 GVGVLLAASLFCWIHAISI-SDTLGEGAFIMSLSMLFVPLLAWPIFGQRPIRAFWLSLPV 128
Query: 244 SALGVGMLECSGSPPSVGDFLNFLSA-IFFGIHMLRTERISRSTKKENFLPLLGYEICVV 302
+ +G+ +L +G+ + L FL+A +H R S LP +
Sbjct: 129 AVVGLFLLAWNGTWQFAANQLWFLAASCCLALHFNFNSRFSSQ------LPPM------- 175
Query: 303 ALLSTIWVLVGGWFDSSQDFDQSPWTWTMLWDWMVTFPWVPALYTGIFSTGICLWIEIAA 362
LL+T+ + G + + W T+ VT+ W AL + +T + ++
Sbjct: 176 -LLTTLQLFTAGCLGITLSWLTESWPATIS---PVTWKWF-ALSV-LLATSLRYLMQTMG 229
Query: 363 MRDVSATETAIIYGLEPLW 381
+ + T A++ LEP+W
Sbjct: 230 QKSANPTNAALLMLLEPVW 248
>UNIPROTKB|Q5LTZ8 [details] [associations]
symbol:SPO1262 "Membrane protein, putative" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020 EMBL:CP000031
GenomeReviews:CP000031_GR RefSeq:YP_166507.1 GeneID:3192911
KEGG:sil:SPO1262 PATRIC:23375827 HOGENOM:HOG000121668 OMA:AFWLYLI
ProtClustDB:CLSK757166 Uniprot:Q5LTZ8
Length = 299
Score = 121 (47.7 bits), Expect = 0.00010, P = 0.00010
Identities = 61/264 (23%), Positives = 107/264 (40%)
Query: 154 ASFCAVRFVMSAIPFLPFVFWARDDVKTRNAGIELGLWVSLGYFVEALGLLTSDAGRASF 213
AS C + + A P P+ + +R+ K G+ L L Y V GL + AGRAS
Sbjct: 47 ASVCVL--LALAAPRFPWTYRSREMTKGALCGV---LEPGLAYVVGLAGLAQTTAGRASI 101
Query: 214 ISLFTVIVVPLFDGMLGAIIPAHTWFGVLISALGVGMLECSGSPPSV-------GDFLNF 266
IS +++ L +L P + A+G G++ S SP GD +
Sbjct: 102 ISASEPVLIVLVAWVLFNQRPGLRLMAAIAIAVG-GLVLVSWSPVVEDRGGAFRGDMMVV 160
Query: 267 LSAIFFGIHMLRTERISRSTKKENFLPLLGYEICVVALLSTIWVLVGGWFDSSQDFDQSP 326
L+ +F +++ + RI S + G ++ +A ++ D F P
Sbjct: 161 LATLFAAGYVVISSRIVGSFPAASLAS--GQQMVGLAFAMLVYAGAMAHGDDMGGFGAIP 218
Query: 327 WTWTMLWDWMVTFPWVPALYTGIFSTGICLWIEIAAMRDVSATETAIIYGLEPLWGAGFA 386
T+ + A +G+ + W+ + +R +SA + L P++G A
Sbjct: 219 GG-TLAY----------AALSGVVQYALAFWLYLIGLRYLSAGAAGLWLTLIPVFGLAGA 267
Query: 387 WFLLGERWSTAGWIGAALVLDVQI 410
W LGER +GA +++ +
Sbjct: 268 WLWLGERPGLLTVLGAIVIVSAVV 291
>TIGR_CMR|SPO_1262 [details] [associations]
symbol:SPO_1262 "membrane protein, putative"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0016020 "membrane" evidence=ISS]
InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020 EMBL:CP000031
GenomeReviews:CP000031_GR RefSeq:YP_166507.1 GeneID:3192911
KEGG:sil:SPO1262 PATRIC:23375827 HOGENOM:HOG000121668 OMA:AFWLYLI
ProtClustDB:CLSK757166 Uniprot:Q5LTZ8
Length = 299
Score = 121 (47.7 bits), Expect = 0.00010, P = 0.00010
Identities = 61/264 (23%), Positives = 107/264 (40%)
Query: 154 ASFCAVRFVMSAIPFLPFVFWARDDVKTRNAGIELGLWVSLGYFVEALGLLTSDAGRASF 213
AS C + + A P P+ + +R+ K G+ L L Y V GL + AGRAS
Sbjct: 47 ASVCVL--LALAAPRFPWTYRSREMTKGALCGV---LEPGLAYVVGLAGLAQTTAGRASI 101
Query: 214 ISLFTVIVVPLFDGMLGAIIPAHTWFGVLISALGVGMLECSGSPPSV-------GDFLNF 266
IS +++ L +L P + A+G G++ S SP GD +
Sbjct: 102 ISASEPVLIVLVAWVLFNQRPGLRLMAAIAIAVG-GLVLVSWSPVVEDRGGAFRGDMMVV 160
Query: 267 LSAIFFGIHMLRTERISRSTKKENFLPLLGYEICVVALLSTIWVLVGGWFDSSQDFDQSP 326
L+ +F +++ + RI S + G ++ +A ++ D F P
Sbjct: 161 LATLFAAGYVVISSRIVGSFPAASLAS--GQQMVGLAFAMLVYAGAMAHGDDMGGFGAIP 218
Query: 327 WTWTMLWDWMVTFPWVPALYTGIFSTGICLWIEIAAMRDVSATETAIIYGLEPLWGAGFA 386
T+ + A +G+ + W+ + +R +SA + L P++G A
Sbjct: 219 GG-TLAY----------AALSGVVQYALAFWLYLIGLRYLSAGAAGLWLTLIPVFGLAGA 267
Query: 387 WFLLGERWSTAGWIGAALVLDVQI 410
W LGER +GA +++ +
Sbjct: 268 WLWLGERPGLLTVLGAIVIVSAVV 291
>UNIPROTKB|Q87ZF9 [details] [associations]
symbol:PSPTO_3470 "Membrane protein, putative"
species:223283 "Pseudomonas syringae pv. tomato str. DC3000"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000620 Pfam:PF00892
GO:GO:0016020 EMBL:AE016853 GenomeReviews:AE016853_GR
eggNOG:COG0697 HOGENOM:HOG000156003 OMA:FIAYYLQ
ProtClustDB:CLSK908833 RefSeq:NP_793250.1 GeneID:1185135
KEGG:pst:PSPTO_3470 PATRIC:19998361
BioCyc:PSYR223283:GJIX-3527-MONOMER Uniprot:Q87ZF9
Length = 312
Score = 115 (45.5 bits), Expect = 0.00053, P = 0.00053
Identities = 54/259 (20%), Positives = 115/259 (44%)
Query: 129 LLNVITIVYASDIPILKAAEEIMHPASFCAVRFVMSAIPFLPFVFWARDDVK--TRNAGI 186
+L +IT+++ +++ A + P F +RF +A+ F + AG+
Sbjct: 16 VLILITMLWGGTFLLVQHALTVSGPMFFVGLRFAAAALIVALFSLKVLRGLTFLELKAGV 75
Query: 187 ELGLWVSLGYFVEALGLLTSDAGRASFISLFTVIVVPLFDGM-LGAIIPAHTWFGVLISA 245
+G + LGY ++ +GL T + +++FI+ V VPL + LG G++++
Sbjct: 76 FIGTAIMLGYGLQTVGLQTIPSSQSAFITALYVPCVPLLQWLVLGRRPGLMPTLGIILAF 135
Query: 246 LGVGMLEC-SGSPPSV--GDFLNFLSAIFFGIHMLRTERISRSTKKENFLPLLGYEICVV 302
G+ ++ G+ ++ G+ + +SA+ ++ IS K + + ++
Sbjct: 136 TGLMLVSGPQGATLNLSSGEIVTLISAVAIAAEIIM---ISAYAGKVDVRRVTVVQLATA 192
Query: 303 ALLSTIWVLVGGWFDSSQDFDQSPWTWTMLWDWMVTFPWVPALYTGIFSTGICLWIEIAA 362
++L+ + ++ + DF W++ V A+ G+ S I + + A
Sbjct: 193 SILAFLMIVPTQ--ERLPDFS-----------WLLV---VSAVGLGLMSAAIQIAMNWA- 235
Query: 363 MRDVSATETAIIYGLEPLW 381
+ VS T +IY EP+W
Sbjct: 236 QKSVSPTRATVIYAGEPVW 254
>UNIPROTKB|Q87VN4 [details] [associations]
symbol:PSPTO_4901 "Membrane protein, putative"
species:223283 "Pseudomonas syringae pv. tomato str. DC3000"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000620 Pfam:PF00892
GO:GO:0016020 EMBL:AE016853 GenomeReviews:AE016853_GR
eggNOG:COG0697 HOGENOM:HOG000184104 ProtClustDB:CLSK868551
RefSeq:NP_794635.1 GeneID:1186584 KEGG:pst:PSPTO_4901
PATRIC:20001312 OMA:MLSHGDM BioCyc:PSYR223283:GJIX-4967-MONOMER
Uniprot:Q87VN4
Length = 293
Score = 113 (44.8 bits), Expect = 0.00078, P = 0.00078
Identities = 70/293 (23%), Positives = 126/293 (43%)
Query: 132 VITIVYASDIPILKAAEEIMHPASFCAVRFVMSAIPFLPFVF---WA-RDDVKTRNAGI- 186
+ +++A + + KA+ ++ PA R+ ++ + F PF+ WA R +K I
Sbjct: 8 ITVLIWAVNTAVTKASAGVIFPAEIGFYRWALAGLLFTPFMIKPVWANRAAIKPLLGKIF 67
Query: 187 ---ELG--LWVSLGYFVEALGLLTSDAGRASFISLFTVIVVPLFDGMLGAIIPAHTWFGV 241
LG ++ SL YF A GL T+ SL ++ + L LG + + G
Sbjct: 68 VLAVLGTAMYQSLAYF--AAGLTTA-TNMGIIQSLVPMMALGLSIACLGNHLTSGALLGA 124
Query: 242 LISALGVGMLECSGSPPSV-------GDFLNFLSAIFFGIHMLRTERISRSTKKENF-LP 293
++S GV ++ +G+P + GD + ++A + ++ S KK LP
Sbjct: 125 ILSFAGVVVVVSAGNPAQLIEHGVNRGDAMVLVAAASYAVY-------STLLKKWQLRLP 177
Query: 294 LLGYEICVVALLSTIWVLVGGWFDSSQDFDQSPWTWTMLWDWMVTFPWVPALYTGIFSTG 353
L ++ V +L I VL+ + SS+ + P V LY I ++
Sbjct: 178 PL--QLLYVQILLAILVLLPPFILSSKTGLNAS-----------NIPMV--LYAAIPTSM 222
Query: 354 ICLWIEIAAMRDVSATETAIIYGLEPLWGAGFAWFLLGERWSTAGWIGAALVL 406
+ W+ + A+ + + T + + L P+ A A LGE+ + G AL L
Sbjct: 223 LAPWLWMTAIMRLGPSRTTLFFNLMPIATALIAAATLGEQLALYHLFGGALTL 275
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.326 0.138 0.448 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 414 393 0.00095 117 3 11 22 0.45 33
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 23
No. of states in DFA: 625 (66 KB)
Total size of DFA: 272 KB (2140 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 30.74u 0.09s 30.83t Elapsed: 00:00:03
Total cpu time: 30.75u 0.09s 30.84t Elapsed: 00:00:03
Start: Tue May 21 04:13:46 2013 End: Tue May 21 04:13:49 2013