Query 015064
Match_columns 414
No_of_seqs 208 out of 1537
Neff 8.1
Searched_HMMs 46136
Date Fri Mar 29 02:44:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015064.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015064hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK11689 aromatic amino acid e 100.0 9E-31 2E-35 253.9 30.4 265 124-412 3-285 (295)
2 PRK11453 O-acetylserine/cystei 100.0 4.5E-30 9.7E-35 249.5 34.3 273 127-412 6-285 (299)
3 PRK11272 putative DMT superfam 100.0 2.6E-30 5.6E-35 250.3 32.1 269 126-413 9-284 (292)
4 PRK15430 putative chlorampheni 100.0 6.9E-30 1.5E-34 247.8 32.1 270 120-411 3-282 (296)
5 PLN00411 nodulin MtN21 family 100.0 8.9E-30 1.9E-34 251.7 32.3 277 123-414 11-328 (358)
6 PRK10532 threonine and homoser 100.0 8.6E-29 1.9E-33 239.8 32.4 265 123-413 10-280 (293)
7 TIGR00950 2A78 Carboxylate/Ami 100.0 1.7E-28 3.7E-33 233.1 30.5 255 137-410 1-260 (260)
8 TIGR00688 rarD rarD protein. T 99.9 1.9E-25 4.2E-30 212.1 29.2 241 125-389 2-255 (256)
9 TIGR03340 phn_DUF6 phosphonate 99.9 3.7E-25 8.1E-30 213.1 27.2 267 127-411 3-280 (281)
10 PTZ00343 triose or hexose phos 99.9 2.3E-24 5E-29 213.6 31.2 281 124-414 48-348 (350)
11 TIGR00817 tpt Tpt phosphate/ph 99.9 6.6E-25 1.4E-29 213.5 26.6 271 138-414 15-293 (302)
12 KOG4510 Permease of the drug/m 99.9 7.6E-28 1.6E-32 218.7 5.4 269 122-412 35-323 (346)
13 COG0697 RhaT Permeases of the 99.9 2.9E-22 6.3E-27 192.2 32.2 269 123-413 5-286 (292)
14 COG5006 rhtA Threonine/homoser 99.9 3.3E-22 7.2E-27 181.1 27.3 260 126-410 13-278 (292)
15 COG2962 RarD Predicted permeas 99.9 1.1E-19 2.3E-24 169.1 30.2 266 123-411 5-280 (293)
16 TIGR00776 RhaT RhaT L-rhamnose 99.9 1.3E-19 2.9E-24 175.1 28.0 258 126-412 2-286 (290)
17 PF06027 DUF914: Eukaryotic pr 99.8 1.8E-18 4E-23 168.2 29.2 273 123-412 11-303 (334)
18 KOG2765 Predicted membrane pro 99.7 7.6E-17 1.7E-21 153.9 18.2 280 122-413 11-389 (416)
19 PF08449 UAA: UAA transporter 99.7 7.7E-14 1.7E-18 135.9 27.6 248 152-412 31-295 (303)
20 COG2510 Predicted membrane pro 99.5 1.6E-13 3.6E-18 112.3 11.4 129 125-253 3-139 (140)
21 COG2510 Predicted membrane pro 99.5 9.1E-13 2E-17 108.0 12.3 136 261-414 4-139 (140)
22 PF04142 Nuc_sug_transp: Nucle 99.3 2.4E-10 5.2E-15 107.5 21.6 211 180-405 15-244 (244)
23 PF00892 EamA: EamA-like trans 99.3 8.4E-12 1.8E-16 104.3 10.0 125 270-413 1-125 (126)
24 KOG1441 Glucose-6-phosphate/ph 99.3 1.2E-11 2.6E-16 119.3 10.9 263 140-414 32-307 (316)
25 PF00892 EamA: EamA-like trans 99.3 3E-11 6.6E-16 100.9 11.2 117 135-252 1-125 (126)
26 KOG1580 UDP-galactose transpor 99.2 2.3E-10 4.9E-15 103.3 12.6 244 154-410 54-309 (337)
27 KOG2234 Predicted UDP-galactos 99.2 6E-08 1.3E-12 93.5 29.2 273 125-412 15-320 (345)
28 KOG1444 Nucleotide-sugar trans 99.2 6.6E-09 1.4E-13 98.7 22.0 272 130-412 17-298 (314)
29 KOG3912 Predicted integral mem 99.1 1.3E-08 2.8E-13 94.4 19.5 272 137-412 15-332 (372)
30 PF13536 EmrE: Multidrug resis 99.1 1.4E-09 3E-14 90.2 12.0 98 158-256 2-109 (113)
31 KOG2766 Predicted membrane pro 99.1 8.3E-11 1.8E-15 107.4 3.7 239 152-412 47-297 (336)
32 TIGR00950 2A78 Carboxylate/Ami 99.0 8.7E-09 1.9E-13 97.7 16.6 127 123-249 126-260 (260)
33 KOG1581 UDP-galactose transpor 99.0 6.1E-08 1.3E-12 91.2 19.8 247 152-411 50-310 (327)
34 PF06800 Sugar_transport: Suga 98.9 3.3E-07 7.1E-12 86.5 23.1 234 153-411 12-268 (269)
35 TIGR03340 phn_DUF6 phosphonate 98.9 3.1E-08 6.6E-13 95.5 15.7 131 262-412 3-133 (281)
36 PF03151 TPT: Triose-phosphate 98.9 7.8E-08 1.7E-12 83.7 14.8 148 261-414 1-153 (153)
37 KOG1443 Predicted integral mem 98.9 2.6E-07 5.7E-12 86.9 18.7 251 153-412 45-313 (349)
38 TIGR00688 rarD rarD protein. T 98.8 7.1E-08 1.5E-12 91.6 14.9 137 260-412 2-140 (256)
39 PRK15430 putative chlorampheni 98.8 5.6E-08 1.2E-12 94.4 13.8 138 258-412 6-143 (296)
40 PRK13499 rhamnose-proton sympo 98.8 8.4E-06 1.8E-10 80.0 28.1 276 122-412 4-339 (345)
41 PRK10532 threonine and homoser 98.8 2.5E-07 5.4E-12 89.7 16.5 129 124-253 147-281 (293)
42 PRK11689 aromatic amino acid e 98.7 3.9E-07 8.5E-12 88.4 15.6 128 124-254 155-288 (295)
43 KOG4314 Predicted carbohydrate 98.7 1.7E-07 3.7E-12 82.8 11.5 205 189-411 60-273 (290)
44 PRK02971 4-amino-4-deoxy-L-ara 98.7 5.9E-07 1.3E-11 76.1 13.9 119 260-414 2-122 (129)
45 PLN00411 nodulin MtN21 family 98.7 4.6E-07 1E-11 90.1 15.2 134 261-411 14-153 (358)
46 PRK11272 putative DMT superfam 98.7 7.4E-07 1.6E-11 86.3 15.9 130 124-254 149-286 (292)
47 COG5070 VRG4 Nucleotide-sugar 98.6 2.9E-06 6.4E-11 76.5 15.6 253 141-406 22-288 (309)
48 PF05653 Mg_trans_NIPA: Magnes 98.5 2.6E-06 5.5E-11 82.7 15.4 258 122-413 4-291 (300)
49 PRK11453 O-acetylserine/cystei 98.5 3.9E-06 8.5E-11 81.6 15.4 124 262-412 6-130 (299)
50 PRK15051 4-amino-4-deoxy-L-ara 98.5 3.3E-06 7.2E-11 69.6 11.9 68 346-413 41-108 (111)
51 KOG1442 GDP-fucose transporter 98.4 1.5E-07 3.2E-12 87.2 4.1 248 152-411 60-324 (347)
52 TIGR00817 tpt Tpt phosphate/ph 98.4 2.7E-06 5.8E-11 82.8 13.0 130 124-253 144-293 (302)
53 PF13536 EmrE: Multidrug resis 98.4 2.8E-06 6.1E-11 70.3 10.0 71 341-412 34-104 (113)
54 TIGR00803 nst UDP-galactose tr 98.4 8.1E-06 1.8E-10 75.8 14.3 61 351-411 161-221 (222)
55 PRK15051 4-amino-4-deoxy-L-ara 98.4 1.3E-05 2.7E-10 66.2 13.2 62 192-253 47-109 (111)
56 TIGR00776 RhaT RhaT L-rhamnose 98.3 7.9E-06 1.7E-10 79.1 12.7 126 124-252 151-287 (290)
57 COG0697 RhaT Permeases of the 98.3 4.4E-05 9.5E-10 72.9 16.8 130 124-254 153-288 (292)
58 PF03151 TPT: Triose-phosphate 98.2 5.9E-05 1.3E-09 65.4 15.4 125 126-250 1-150 (153)
59 PTZ00343 triose or hexose phos 98.2 4.2E-05 9.1E-10 76.1 16.2 129 124-252 193-347 (350)
60 KOG1582 UDP-galactose transpor 98.2 9.3E-05 2E-09 68.9 16.7 244 155-411 77-329 (367)
61 PRK02971 4-amino-4-deoxy-L-ara 98.2 7.2E-05 1.6E-09 63.3 14.0 119 125-255 2-124 (129)
62 COG2962 RarD Predicted permeas 98.0 7.4E-05 1.6E-09 70.5 11.7 136 259-411 6-141 (293)
63 COG5006 rhtA Threonine/homoser 97.9 0.0003 6.4E-09 65.1 13.3 127 124-250 147-279 (292)
64 COG4975 GlcU Putative glucose 97.7 8.6E-06 1.9E-10 74.7 -0.5 259 126-411 3-282 (288)
65 PRK10452 multidrug efflux syst 97.6 0.00089 1.9E-08 55.8 11.3 67 347-413 35-102 (120)
66 PRK09541 emrE multidrug efflux 97.5 0.00064 1.4E-08 55.8 9.0 66 347-412 35-101 (110)
67 PRK10650 multidrug efflux syst 97.5 0.0024 5.3E-08 52.3 12.1 64 349-412 42-106 (109)
68 KOG2922 Uncharacterized conser 97.5 0.00041 8.8E-09 66.4 8.6 260 121-413 17-305 (335)
69 PF10639 UPF0546: Uncharacteri 97.5 0.00057 1.2E-08 56.1 7.6 109 131-251 2-112 (113)
70 PF06027 DUF914: Eukaryotic pr 97.4 0.0046 1E-07 60.8 15.1 71 341-412 79-149 (334)
71 PF04657 DUF606: Protein of un 97.4 0.0077 1.7E-07 51.6 14.6 124 127-250 3-138 (138)
72 PF04657 DUF606: Protein of un 97.4 0.0083 1.8E-07 51.4 14.5 131 262-411 3-138 (138)
73 PF06800 Sugar_transport: Suga 97.4 0.0037 8E-08 59.3 13.3 126 122-249 135-267 (269)
74 PRK10650 multidrug efflux syst 97.4 0.0067 1.4E-07 49.7 12.9 71 181-251 34-106 (109)
75 COG2076 EmrE Membrane transpor 97.3 0.003 6.4E-08 51.1 10.2 73 181-253 29-103 (106)
76 KOG1583 UDP-N-acetylglucosamin 97.3 0.0041 8.9E-08 58.3 12.4 245 154-411 34-311 (330)
77 PRK11431 multidrug efflux syst 97.3 0.0036 7.8E-08 50.9 10.7 72 181-252 28-101 (105)
78 PRK10452 multidrug efflux syst 97.3 0.0033 7.1E-08 52.4 10.6 69 186-254 34-104 (120)
79 PRK11431 multidrug efflux syst 97.3 0.0017 3.6E-08 52.9 8.5 64 349-412 36-100 (105)
80 COG2076 EmrE Membrane transpor 97.3 0.0016 3.6E-08 52.6 8.3 65 348-412 36-101 (106)
81 PRK09541 emrE multidrug efflux 97.3 0.0038 8.3E-08 51.3 10.7 68 186-253 34-103 (110)
82 PF08449 UAA: UAA transporter 97.3 0.01 2.2E-07 57.8 15.3 128 126-253 155-297 (303)
83 PF00893 Multi_Drug_Res: Small 97.1 0.0044 9.6E-08 49.3 9.4 58 348-405 35-93 (93)
84 KOG4510 Permease of the drug/m 97.0 0.00025 5.5E-09 65.9 0.9 135 257-414 35-169 (346)
85 PF05653 Mg_trans_NIPA: Magnes 96.8 0.0064 1.4E-07 59.1 9.6 116 257-411 4-119 (300)
86 COG3238 Uncharacterized protei 96.5 0.093 2E-06 45.3 13.3 137 260-414 5-146 (150)
87 PF00893 Multi_Drug_Res: Small 96.4 0.024 5.1E-07 45.1 8.2 54 190-243 37-92 (93)
88 PF06379 RhaT: L-rhamnose-prot 96.3 1.3 2.7E-05 43.5 25.3 277 123-412 5-338 (344)
89 PF04142 Nuc_sug_transp: Nucle 96.2 0.025 5.4E-07 53.3 8.8 73 340-413 16-88 (244)
90 COG3238 Uncharacterized protei 96.0 0.4 8.6E-06 41.4 14.2 129 124-252 4-145 (150)
91 PF10639 UPF0546: Uncharacteri 95.7 0.12 2.5E-06 42.6 9.6 62 350-411 49-111 (113)
92 KOG1441 Glucose-6-phosphate/ph 95.0 0.069 1.5E-06 52.1 7.0 130 123-252 161-306 (316)
93 KOG1581 UDP-galactose transpor 94.9 0.3 6.4E-06 46.8 10.7 130 122-251 169-311 (327)
94 TIGR00803 nst UDP-galactose tr 94.4 0.34 7.3E-06 44.7 9.9 66 185-250 155-221 (222)
95 PF07857 DUF1632: CEO family ( 94.4 0.78 1.7E-05 43.4 12.3 159 126-286 1-209 (254)
96 PRK13499 rhamnose-proton sympo 94.1 1.8 3.9E-05 42.8 14.8 133 122-254 171-342 (345)
97 KOG1580 UDP-galactose transpor 93.9 0.63 1.4E-05 43.0 10.2 129 125-253 172-313 (337)
98 COG4975 GlcU Putative glucose 93.8 0.031 6.8E-07 51.8 1.6 128 261-413 3-135 (288)
99 KOG2234 Predicted UDP-galactos 92.8 3.5 7.6E-05 40.5 14.0 62 352-413 102-163 (345)
100 KOG4831 Unnamed protein [Funct 92.7 0.34 7.5E-06 38.8 5.7 114 129-252 7-124 (125)
101 KOG2765 Predicted membrane pro 92.2 1.8 3.9E-05 42.8 11.1 135 121-255 243-392 (416)
102 KOG2922 Uncharacterized conser 89.8 0.19 4E-06 48.6 1.9 115 258-411 19-133 (335)
103 KOG1444 Nucleotide-sugar trans 83.8 8.4 0.00018 37.4 9.4 128 124-251 156-298 (314)
104 PF07857 DUF1632: CEO family ( 83.0 4.4 9.6E-05 38.3 7.2 124 261-411 1-131 (254)
105 KOG4314 Predicted carbohydrate 82.5 2.1 4.5E-05 38.6 4.4 58 355-412 66-123 (290)
106 KOG3912 Predicted integral mem 78.3 5.1 0.00011 38.2 5.8 60 353-412 97-156 (372)
107 PF04342 DUF486: Protein of un 78.3 18 0.00039 29.2 8.0 32 383-414 77-108 (108)
108 KOG1443 Predicted integral mem 77.7 41 0.00089 32.7 11.6 128 124-251 163-313 (349)
109 COG5070 VRG4 Nucleotide-sugar 75.8 14 0.00029 34.2 7.5 98 150-247 182-290 (309)
110 PRK02237 hypothetical protein; 72.8 24 0.00051 28.7 7.4 46 366-411 56-102 (109)
111 PRK02237 hypothetical protein; 72.8 25 0.00054 28.6 7.5 42 212-253 63-105 (109)
112 PF06379 RhaT: L-rhamnose-prot 72.0 34 0.00073 33.8 9.8 139 259-413 6-152 (344)
113 PF06570 DUF1129: Protein of u 71.8 33 0.00071 31.3 9.4 21 52-72 21-41 (206)
114 PRK09776 putative diguanylate 70.3 2E+02 0.0043 32.9 17.3 23 261-283 71-93 (1092)
115 KOG1442 GDP-fucose transporter 68.9 2.3 4.9E-05 40.4 1.0 115 290-414 60-174 (347)
116 PF02694 UPF0060: Uncharacteri 66.7 23 0.00049 28.8 6.1 43 212-254 61-104 (107)
117 PF02694 UPF0060: Uncharacteri 64.6 13 0.00028 30.1 4.4 49 363-411 51-100 (107)
118 COG1742 Uncharacterized conser 64.4 50 0.0011 26.7 7.6 33 222-254 72-105 (109)
119 KOG1582 UDP-galactose transpor 60.5 97 0.0021 29.7 10.0 105 151-255 218-334 (367)
120 COG3086 RseC Positive regulato 59.8 18 0.0004 30.9 4.7 42 207-248 73-114 (150)
121 PF06570 DUF1129: Protein of u 53.1 1.8E+02 0.0039 26.4 11.3 14 343-356 182-195 (206)
122 PF07168 Ureide_permease: Urei 52.0 2.6 5.7E-05 40.5 -1.7 108 130-237 1-128 (336)
123 KOG2322 N-methyl-D-aspartate r 50.8 1.4E+02 0.0031 27.8 9.3 54 229-282 159-217 (237)
124 TIGR02865 spore_II_E stage II 50.2 2.2E+02 0.0047 31.6 12.4 45 208-252 10-55 (764)
125 PF04246 RseC_MucC: Positive r 49.5 28 0.00061 29.3 4.4 42 207-248 66-107 (135)
126 COG3169 Uncharacterized protei 46.8 1.5E+02 0.0032 23.7 10.8 32 383-414 84-115 (116)
127 PF07168 Ureide_permease: Urei 46.6 9.4 0.0002 36.9 1.0 84 121-204 215-325 (336)
128 COG2814 AraJ Arabinose efflux 45.8 3.4E+02 0.0073 27.5 18.3 110 205-314 44-161 (394)
129 COG2917 Intracellular septatio 45.2 2.2E+02 0.0048 25.3 9.8 87 194-280 8-98 (180)
130 KOG2766 Predicted membrane pro 44.7 25 0.00053 33.3 3.4 133 121-254 162-300 (336)
131 TIGR00997 ispZ intracellular s 43.1 2.4E+02 0.0053 25.1 10.0 59 196-254 10-70 (178)
132 PRK11715 inner membrane protei 42.9 3.9E+02 0.0085 27.5 12.6 78 177-254 326-405 (436)
133 PRK10862 SoxR reducing system 42.5 34 0.00073 29.8 3.8 25 207-231 73-97 (154)
134 PF05297 Herpes_LMP1: Herpesvi 41.5 8.7 0.00019 36.6 0.0 74 193-266 33-113 (381)
135 PF09656 PGPGW: Putative trans 38.4 1.3E+02 0.0027 21.3 5.4 46 236-285 4-49 (53)
136 PF06123 CreD: Inner membrane 36.5 4.9E+02 0.011 26.7 14.2 56 359-414 369-424 (430)
137 PF09852 DUF2079: Predicted me 34.3 5.3E+02 0.011 26.4 12.5 41 152-192 58-98 (449)
138 COG3476 Tryptophan-rich sensor 32.2 2.9E+02 0.0062 24.3 7.8 55 355-410 64-120 (161)
139 PF04474 DUF554: Protein of un 31.8 4.3E+02 0.0092 24.6 13.0 45 212-256 4-54 (226)
140 CHL00045 ccsA cytochrome c bio 31.4 5.1E+02 0.011 25.4 19.6 21 260-280 146-166 (319)
141 COG1742 Uncharacterized conser 30.2 2.4E+02 0.0051 22.9 6.4 40 372-411 62-101 (109)
142 COG4657 RnfA Predicted NADH:ub 29.7 3.9E+02 0.0085 23.5 11.1 81 230-310 94-185 (193)
143 PF06123 CreD: Inner membrane 28.4 6.7E+02 0.014 25.8 12.7 74 180-253 323-398 (430)
144 TIGR03644 marine_trans_1 proba 28.0 6.6E+02 0.014 25.6 15.5 64 344-407 296-361 (404)
145 PRK11715 inner membrane protei 26.9 7.1E+02 0.015 25.6 13.5 14 401-414 417-430 (436)
146 PF12811 BaxI_1: Bax inhibitor 26.7 5.8E+02 0.013 24.5 22.9 50 259-312 209-262 (274)
147 KOG3817 Uncharacterized conser 26.5 3.2E+02 0.0069 27.3 7.8 80 137-216 201-285 (452)
148 TIGR03144 cytochr_II_ccsB cyto 24.0 5.9E+02 0.013 23.7 15.9 24 260-283 102-125 (243)
149 COG3086 RseC Positive regulato 23.9 1.5E+02 0.0033 25.5 4.6 29 362-390 68-96 (150)
150 KOG4831 Unnamed protein [Funct 23.7 64 0.0014 26.2 2.2 55 357-411 67-122 (125)
151 PF04246 RseC_MucC: Positive r 23.2 93 0.002 26.1 3.3 25 365-389 64-88 (135)
152 COG3201 PnuC Nicotinamide mono 22.2 6.4E+02 0.014 23.4 13.7 138 229-384 22-159 (222)
153 PF09295 ChAPs: ChAPs (Chs5p-A 20.8 45 0.00097 33.8 1.0 27 23-55 38-64 (395)
154 PF05297 Herpes_LMP1: Herpesvi 20.4 34 0.00073 32.8 0.0 15 124-138 26-40 (381)
155 COG2807 CynX Cyanate permease 20.3 9.1E+02 0.02 24.5 20.5 48 335-383 205-257 (395)
156 PF11139 DUF2910: Protein of u 20.2 6.5E+02 0.014 22.7 14.7 37 375-411 159-208 (214)
No 1
>PRK11689 aromatic amino acid exporter; Provisional
Probab=100.00 E-value=9e-31 Score=253.85 Aligned_cols=265 Identities=16% Similarity=0.130 Sum_probs=205.3
Q ss_pred hHHHHHHHHHHHHHhhhHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHhcCcchhhhHHHHHHHH-HHHHHHHHHHH
Q 015064 124 IRSIFLLNVITIVYASDIPILKAAEEIMHPASFCAVRFVMSAIPFLPFVFWARDDVKTRNAGIELGLW-VSLGYFVEALG 202 (414)
Q Consensus 124 ~~g~l~~lla~~~wg~~~~~~k~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~gl~-~~~~~~~~~~a 202 (414)
.++++++++++++||.+++..|...++++|..+.++|+.++.++++++..+++. ++..++.+..+.+ ......+++.+
T Consensus 3 ~~~~l~~l~a~~~Wg~~~~~~k~~~~~~~P~~~~~~R~~~a~l~l~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~a 81 (295)
T PRK11689 3 QKATLIGLIAILLWSTMVGLIRGVSESLGPVGGAAMIYSVSGLLLLLTVGFPRL-RQFPKRYLLAGGLLFVSYEICLALS 81 (295)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHcccccc-ccccHHHHHHHhHHHHHHHHHHHHH
Confidence 356788999999999999999999999999999999999999998876422221 2222333344433 44555667777
Q ss_pred Hhh----cchhHHHHHHhhHHHHHHHHHH-HhcccCchhHHHHHHHHHHhhhhhcccCC------------CCchhhHHH
Q 015064 203 LLT----SDAGRASFISLFTVIVVPLFDG-MLGAIIPAHTWFGVLISALGVGMLECSGS------------PPSVGDFLN 265 (414)
Q Consensus 203 l~~----~~~~~a~~l~~~~Pl~~~ll~~-~l~er~~~~~~~gi~l~~~Gv~li~~~~~------------~~~~G~lla 265 (414)
+++ +++++++++.++.|+++.++++ ++|||+++++++|++++++|++++..++. ....|++++
T Consensus 82 ~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~G~~~~ 161 (295)
T PRK11689 82 LGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNPLSYGLA 161 (295)
T ss_pred HHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccChHHHHHH
Confidence 754 6788899999999999999998 68999999999999999999999986532 123599999
Q ss_pred HHHHHHHHHHHHHHhHhhhccCCCCchhHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCcchhhhhccccchhhHHHHH
Q 015064 266 FLSAIFFGIHMLRTERISRSTKKENFLPLLGYEICVVALLSTIWVLVGGWFDSSQDFDQSPWTWTMLWDWMVTFPWVPAL 345 (414)
Q Consensus 266 l~aa~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ll 345 (414)
++++++||.|.+..||..++.+ +.... ...+++...+.....+. ... .++ ++.|..++
T Consensus 162 l~aa~~~A~~~v~~k~~~~~~~---~~~~~---~~~~~~~l~~~~~~~~~----~~~---~~~---------~~~~~~l~ 219 (295)
T PRK11689 162 FIGAFIWAAYCNVTRKYARGKN---GITLF---FILTALALWIKYFLSPQ----PAM---VFS---------LPAIIKLL 219 (295)
T ss_pred HHHHHHHHHHHHHHhhccCCCC---chhHH---HHHHHHHHHHHHHHhcC----ccc---cCC---------HHHHHHHH
Confidence 9999999999999999876643 33332 22223333322222111 101 111 23477777
Q ss_pred HHHHHHHHHHHHHHHHHhccCChhHHHHHhhhHHHHHHHHHHHHhcCCCchhhHHHHHHHHHhhhcc
Q 015064 346 YTGIFSTGICLWIEIAAMRDVSATETAIIYGLEPLWGAGFAWFLLGERWSTAGWIGAALVLDVQIFL 412 (414)
Q Consensus 346 ~lgv~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~~~lge~~s~~~~iG~~LIi~g~~l~ 412 (414)
+.+ ++++++|.+|++++|+.++++++.+.+++|+++++++++++||++++.+++|+++|+.|+++.
T Consensus 220 ~~~-~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~ 285 (295)
T PRK11689 220 LAA-AAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLC 285 (295)
T ss_pred HHH-HHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHH
Confidence 777 478999999999999999999999999999999999999999999999999999999998654
No 2
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=100.00 E-value=4.5e-30 Score=249.47 Aligned_cols=273 Identities=16% Similarity=0.176 Sum_probs=213.1
Q ss_pred HHHHHHHHHHHhhhHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHhcCcchhhhHHHHHHHHHH-HHHHHHHHHHhh
Q 015064 127 IFLLNVITIVYASDIPILKAAEEIMHPASFCAVRFVMSAIPFLPFVFWARDDVKTRNAGIELGLWVS-LGYFVEALGLLT 205 (414)
Q Consensus 127 ~l~~lla~~~wg~~~~~~k~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~gl~~~-~~~~~~~~al~~ 205 (414)
.++.++++++||.++++.|...++++|.++.++|+.++++.++++..++|+ .++..+..|+... ..+.+++.++++
T Consensus 6 ~l~~l~~~~~Wg~~~~~~k~~~~~~~p~~~~~~R~~~a~~~l~~~~~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~ 82 (299)
T PRK11453 6 GVLALLVVVVWGLNFVVIKVGLHNMPPLMLAGLRFMLVAFPAIFFVARPKV---PLNLLLGYGLTISFGQFAFLFCAINF 82 (299)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhcCCCC---chHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 456888999999999999999999999999999999988777665533222 2333444455443 444677889988
Q ss_pred -cchhHHHHHHhhHHHHHHHHHH-HhcccCchhHHHHHHHHHHhhhhhcccCC---C-CchhhHHHHHHHHHHHHHHHHH
Q 015064 206 -SDAGRASFISLFTVIVVPLFDG-MLGAIIPAHTWFGVLISALGVGMLECSGS---P-PSVGDFLNFLSAIFFGIHMLRT 279 (414)
Q Consensus 206 -~~~~~a~~l~~~~Pl~~~ll~~-~l~er~~~~~~~gi~l~~~Gv~li~~~~~---~-~~~G~llal~aa~~~al~~v~~ 279 (414)
.+++.++++..+.|+++.++++ ++|||+++++++|++++++|+.++..++. . ...|++++++++++|++|.+..
T Consensus 83 ~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~~~~~~~G~~l~l~aal~~a~~~v~~ 162 (299)
T PRK11453 83 GMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNGQHVAMLGFMLTLAAAFSWACGNIFN 162 (299)
T ss_pred cCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCCcchhHHHHHHHHHHHHHHHHHHHHH
Confidence 5889999999999999999998 69999999999999999999999886432 1 2369999999999999999999
Q ss_pred hHhhhccCCCCchhHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCcchhhhhccccchhhHHHHHHHHHHHHHHHHHHH
Q 015064 280 ERISRSTKKENFLPLLGYEICVVALLSTIWVLVGGWFDSSQDFDQSPWTWTMLWDWMVTFPWVPALYTGIFSTGICLWIE 359 (414)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ll~lgv~~~~~~~~l~ 359 (414)
|+..++.+..+......++...+.+.........+...... .+..+ .+++.|..++++|+++++++|.+|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---------~~~~~~~~l~~l~i~~t~~~~~l~ 232 (299)
T PRK11453 163 KKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMI-HSLVT---------IDMTTILSLMYLAFVATIVGYGIW 232 (299)
T ss_pred HHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhh-hhhcc---------CCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99876544333344445555554443333322222111100 00011 124458999999999999999999
Q ss_pred HHHhccCChhHHHHHhhhHHHHHHHHHHHHhcCCCchhhHHHHHHHHHhhhcc
Q 015064 360 IAAMRDVSATETAIIYGLEPLWGAGFAWFLLGERWSTAGWIGAALVLDVQIFL 412 (414)
Q Consensus 360 ~~al~~~~a~~~s~~~~l~pv~a~l~~~~~lge~~s~~~~iG~~LIi~g~~l~ 412 (414)
++++++.++.+++.+.+++|+++.+++++++||.++..+++|+++|+.|+++.
T Consensus 233 ~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~ 285 (299)
T PRK11453 233 GTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYIN 285 (299)
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999875
No 3
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=100.00 E-value=2.6e-30 Score=250.29 Aligned_cols=269 Identities=16% Similarity=0.225 Sum_probs=222.6
Q ss_pred HHHHHHHHHHHHhhhHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHhcCc---chhhhHHHHHHHHH-HHHHHHHHH
Q 015064 126 SIFLLNVITIVYASDIPILKAAEEIMHPASFCAVRFVMSAIPFLPFVFWARDD---VKTRNAGIELGLWV-SLGYFVEAL 201 (414)
Q Consensus 126 g~l~~lla~~~wg~~~~~~k~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~---~~~~~~~~~~gl~~-~~~~~~~~~ 201 (414)
-++.+++..++||.++++.|...++++|.+++++|+.++.++++++...++++ +++++.....|.++ ..++.++++
T Consensus 9 ~~~~~~~~~~iWg~~~~~~K~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 88 (292)
T PRK11272 9 LFGALFALYIIWGSTYLVIRIGVESWPPLMMAGVRFLIAGILLLAFLLLRGHPLPTLRQWLNAALIGLLLLAVGNGMVTV 88 (292)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35677888999999999999999999999999999999999998887665432 23344455567665 456788889
Q ss_pred HH-hhcchhHHHHHHhhHHHHHHHHHHHhcccCchhHHHHHHHHHHhhhhhcccCC--CCchhhHHHHHHHHHHHHHHHH
Q 015064 202 GL-LTSDAGRASFISLFTVIVVPLFDGMLGAIIPAHTWFGVLISALGVGMLECSGS--PPSVGDFLNFLSAIFFGIHMLR 278 (414)
Q Consensus 202 al-~~~~~~~a~~l~~~~Pl~~~ll~~~l~er~~~~~~~gi~l~~~Gv~li~~~~~--~~~~G~llal~aa~~~al~~v~ 278 (414)
+. ++++++.++++.++.|+++.+++.++|||+++++++|++++++|+.++..++. ....|++++++++++||.|.+.
T Consensus 89 ~~~~~~~a~~a~~l~~~~Pl~~~lla~~~~e~~~~~~~~~~~la~~Gv~ll~~~~~~~~~~~G~l~~l~a~~~~a~~~~~ 168 (292)
T PRK11272 89 AEHQNVPSGIAAVVVATVPLFTLCFSRLFGIRTRKLEWLGIAIGLAGIVLLNSGGNLSGNPWGAILILIASASWAFGSVW 168 (292)
T ss_pred HHHccCcHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHHHHHHHhHHHHhcCcccccchHHHHHHHHHHHHHHHHHHH
Confidence 98 99999999999999999999999878999999999999999999999875432 2357999999999999999999
Q ss_pred HhHhhhccCCCCchhHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCcchhhhhccccchhhHHHHHHHHHHHHHHHHHH
Q 015064 279 TERISRSTKKENFLPLLGYEICVVALLSTIWVLVGGWFDSSQDFDQSPWTWTMLWDWMVTFPWVPALYTGIFSTGICLWI 358 (414)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ll~lgv~~~~~~~~l 358 (414)
.|+..++ ++.....+++..++++..+.....+... . . . .+++.|..+++++++++++++.+
T Consensus 169 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~-~-----------~~~~~~~~i~~l~i~~s~~~~~l 229 (292)
T PRK11272 169 SSRLPLP----VGMMAGAAEMLAAGVVLLIASLLSGERL--T-A-L-----------PTLSGFLALGYLAVFGSIIAISA 229 (292)
T ss_pred HHhcCCC----cchHHHHHHHHHHHHHHHHHHHHcCCcc--c-c-c-----------CCHHHHHHHHHHHHHHHHHHHHH
Confidence 9997643 2344567778888777766654332111 0 0 0 01234888999999999999999
Q ss_pred HHHHhccCChhHHHHHhhhHHHHHHHHHHHHhcCCCchhhHHHHHHHHHhhhccc
Q 015064 359 EIAAMRDVSATETAIIYGLEPLWGAGFAWFLLGERWSTAGWIGAALVLDVQIFLP 413 (414)
Q Consensus 359 ~~~al~~~~a~~~s~~~~l~pv~a~l~~~~~lge~~s~~~~iG~~LIi~g~~l~~ 413 (414)
|++++|+.++++++.+.+++|+++.+++++++||.+++.+++|+.+|+.|+++.+
T Consensus 230 ~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~ 284 (292)
T PRK11272 230 YMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVT 284 (292)
T ss_pred HHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999998754
No 4
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.98 E-value=6.9e-30 Score=247.79 Aligned_cols=270 Identities=13% Similarity=0.103 Sum_probs=201.3
Q ss_pred hccchHHHHHHHHHHHHHhhhHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHhcCc------chhhhH--HHHH-HH
Q 015064 120 ASKKIRSIFLLNVITIVYASDIPILKAAEEIMHPASFCAVRFVMSAIPFLPFVFWARDD------VKTRNA--GIEL-GL 190 (414)
Q Consensus 120 ~~~~~~g~l~~lla~~~wg~~~~~~k~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~------~~~~~~--~~~~-gl 190 (414)
++++.+|.+++++++++||..+++.|.. ++++|.++.++|+.++.++++++...+++. .+.++. .... ++
T Consensus 3 ~~~~~~g~~~~l~a~~~wg~~~~~~k~~-~~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (296)
T PRK15430 3 AKQTRQGVLLALAAYFIWGIAPAYFKLI-YYVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSAV 81 (296)
T ss_pred chhhhhHHHHHHHHHHHHHHHHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHHHHH
Confidence 3456789999999999999999999986 569999999999999998887766543221 111222 1223 34
Q ss_pred HHHHHHHHHHHHHhhcchhHHHHHHhhHHHHHHHHHH-HhcccCchhHHHHHHHHHHhhhhhcccCCCCchhhHHHHHHH
Q 015064 191 WVSLGYFVEALGLLTSDAGRASFISLFTVIVVPLFDG-MLGAIIPAHTWFGVLISALGVGMLECSGSPPSVGDFLNFLSA 269 (414)
Q Consensus 191 ~~~~~~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~-~l~er~~~~~~~gi~l~~~Gv~li~~~~~~~~~G~llal~aa 269 (414)
..+.++.++++|++++|+++++++.++.|+++.++++ ++|||+++++++|++++++|++++..+++.. ..++++++
T Consensus 82 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~~~---~~~~l~aa 158 (296)
T PRK15430 82 LIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGSL---PIIALGLA 158 (296)
T ss_pred HHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcCCc---cHHHHHHH
Confidence 4667889999999999999999999999999999998 7899999999999999999999988543322 25789999
Q ss_pred HHHHHHHHHHhHhhhccCCCCchhHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCcchhhhhccccchhhHHHHHHHHH
Q 015064 270 IFFGIHMLRTERISRSTKKENFLPLLGYEICVVALLSTIWVLVGGWFDSSQDFDQSPWTWTMLWDWMVTFPWVPALYTGI 349 (414)
Q Consensus 270 ~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ll~lgv 349 (414)
++|+.|.+..|+..++.. .+......++...+.....+. ... ........+ ..+...++.+.
T Consensus 159 ~~~a~~~i~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~~------------~~~~~~~~~~g 220 (296)
T PRK15430 159 FSFAFYGLVRKKIAVEAQ-TGMLIETMWLLPVAAIYLFAI---ADS--STSHMGQNP------------MSLNLLLIAAG 220 (296)
T ss_pred HHHHHHHHHHHhcCCCCc-hhHHHHHHHHHHHHHHHHHHH---ccC--CcccccCCc------------HHHHHHHHHHH
Confidence 999999999988754211 122222333333333221111 110 000000111 11223344434
Q ss_pred HHHHHHHHHHHHHhccCChhHHHHHhhhHHHHHHHHHHHHhcCCCchhhHHHHHHHHHhhhc
Q 015064 350 FSTGICLWIEIAAMRDVSATETAIIYGLEPLWGAGFAWFLLGERWSTAGWIGAALVLDVQIF 411 (414)
Q Consensus 350 ~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~~~lge~~s~~~~iG~~LIi~g~~l 411 (414)
+.+.++|.+|++++++.++++++.+.+++|+++.+++++++||++++.+++|+++|++|+.+
T Consensus 221 ~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v 282 (296)
T PRK15430 221 IVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAI 282 (296)
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999877654
No 5
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=99.98 E-value=8.9e-30 Score=251.74 Aligned_cols=277 Identities=15% Similarity=0.123 Sum_probs=219.9
Q ss_pred chHHHHHHHHHHHHHhhhHHHHHHhhh-cCCHHHHHHHHHHHHHHHHHHHHHHhcC----c---chhhhHHHHHHHHHHH
Q 015064 123 KIRSIFLLNVITIVYASDIPILKAAEE-IMHPASFCAVRFVMSAIPFLPFVFWARD----D---VKTRNAGIELGLWVSL 194 (414)
Q Consensus 123 ~~~g~l~~lla~~~wg~~~~~~k~~~~-~~~p~~~~~~R~~~a~l~ll~~~~~~~~----~---~~~~~~~~~~gl~~~~ 194 (414)
+.+.++.++...+..+...++.|.+.+ +++|..+.++|+.+++++++++.+++++ + ++.+.+..+.|++++.
T Consensus 11 ~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g~~ 90 (358)
T PLN00411 11 EAVFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLGSM 90 (358)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHH
Confidence 457889999999999999999999997 4999999999999999999988765422 1 1222345556666655
Q ss_pred HHHHHHHHHhhcchhHHHHHHhhHHHHHHHHHH-H------hcccCchhHHHHHHHHHHhhhhhcccCC-----------
Q 015064 195 GYFVEALGLLTSDAGRASFISLFTVIVVPLFDG-M------LGAIIPAHTWFGVLISALGVGMLECSGS----------- 256 (414)
Q Consensus 195 ~~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~-~------l~er~~~~~~~gi~l~~~Gv~li~~~~~----------- 256 (414)
.+.++++|+++++++.++++.++.|+++.++++ + +|||+++.+++|++++++|+.++...++
T Consensus 91 ~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~ 170 (358)
T PLN00411 91 YVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPY 170 (358)
T ss_pred HHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCccccccccccc
Confidence 667899999999999999999999999999998 5 4999999999999999999998774211
Q ss_pred --------------C-CchhhHHHHHHHHHHHHHHHHHhHhhhccCCCCchhHHHHHHHHHHHHHHHHHHHhccCCCCCC
Q 015064 257 --------------P-PSVGDFLNFLSAIFFGIHMLRTERISRSTKKENFLPLLGYEICVVALLSTIWVLVGGWFDSSQD 321 (414)
Q Consensus 257 --------------~-~~~G~llal~aa~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 321 (414)
. ...|++++++++++|++|.+..|+..+++++ ....++++...+++...+........ +..
T Consensus 171 ~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~--~~~~t~~~~~~~~~~~~~~~l~~~~~-~~~- 246 (358)
T PLN00411 171 LNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPA--AFTVSFLYTVCVSIVTSMIGLVVEKN-NPS- 246 (358)
T ss_pred ccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCc--HhHHHHHHHHHHHHHHHHHHHHHccC-Ccc-
Confidence 0 1348899999999999999999998887643 34556677777766665554443211 000
Q ss_pred CCCCcchhhhhccccchhhHHHHHHHHHHHHHHHHHHHHHHhccCChhHHHHHhhhHHHHHHHHHHHHhcCCCchhhHHH
Q 015064 322 FDQSPWTWTMLWDWMVTFPWVPALYTGIFSTGICLWIEIAAMRDVSATETAIIYGLEPLWGAGFAWFLLGERWSTAGWIG 401 (414)
Q Consensus 322 ~~~~~~~~~~~~~w~~~~~~~~ll~lgv~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~~~lge~~s~~~~iG 401 (414)
.|. ..+ +.. +..+++.+++ +.++|.+|++++++.+|++++++.+++|+++++++++++||++++.+++|
T Consensus 247 ----~~~--~~~---~~~-~~~i~y~~i~-t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG 315 (358)
T PLN00411 247 ----VWI--IHF---DIT-LITIVTMAII-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIG 315 (358)
T ss_pred ----cce--ecc---chH-HHHHHHHHHH-HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHH
Confidence 110 000 111 3447777765 56899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhcccC
Q 015064 402 AALVLDVQIFLPR 414 (414)
Q Consensus 402 ~~LIi~g~~l~~r 414 (414)
+++|++|+++.+|
T Consensus 316 ~~LIl~Gv~l~~~ 328 (358)
T PLN00411 316 GILITLGFYAVMW 328 (358)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999988653
No 6
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.97 E-value=8.6e-29 Score=239.75 Aligned_cols=265 Identities=16% Similarity=0.163 Sum_probs=214.7
Q ss_pred chHHHHHHHHHHHHHhhhHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHhc--CcchhhhHHHHHHHHHHHHHHHHH
Q 015064 123 KIRSIFLLNVITIVYASDIPILKAAEEIMHPASFCAVRFVMSAIPFLPFVFWAR--DDVKTRNAGIELGLWVSLGYFVEA 200 (414)
Q Consensus 123 ~~~g~l~~lla~~~wg~~~~~~k~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~--~~~~~~~~~~~~gl~~~~~~~~~~ 200 (414)
+.+++.+++++.++|+.++.+.|.+.++++|.++.++|++++.++++++...++ .++++++..+..|+..+..+.+++
T Consensus 10 ~~~~~~~~~la~~~~~~~~~~~K~~~~~~~~~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 89 (293)
T PRK10532 10 VWLPILLLLIAMASIQSGASLAKSLFPLVGAPGVTALRLALGTLILIAIFKPWRLRFAKEQRLPLLFYGVSLGGMNYLFY 89 (293)
T ss_pred cchHHHHHHHHHHHHHhhHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhHHhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 367899999999999999999999999999999999999999999887765433 234455566677887778888999
Q ss_pred HHHhhcchhHHHHHHhhHHHHHHHHHHHhcccCchhHHHHHHHHHHhhhhhcccCC----CCchhhHHHHHHHHHHHHHH
Q 015064 201 LGLLTSDAGRASFISLFTVIVVPLFDGMLGAIIPAHTWFGVLISALGVGMLECSGS----PPSVGDFLNFLSAIFFGIHM 276 (414)
Q Consensus 201 ~al~~~~~~~a~~l~~~~Pl~~~ll~~~l~er~~~~~~~gi~l~~~Gv~li~~~~~----~~~~G~llal~aa~~~al~~ 276 (414)
++++++|++.++++.++.|+++.+++ +||+. +..++.++++|+.++..++. ....|++++++++++|+.|.
T Consensus 90 ~al~~~~~~~a~~l~~t~Pi~~~ll~---~~~~~--~~~~~~i~~~Gv~li~~~~~~~~~~~~~G~ll~l~aa~~~a~~~ 164 (293)
T PRK10532 90 LSIQTVPLGIAVALEFTGPLAVALFS---SRRPV--DFVWVVLAVLGLWFLLPLGQDVSHVDLTGAALALGAGACWAIYI 164 (293)
T ss_pred HHHhcccHHHHHHHHHHHHHHHHHHh---cCChH--HHHHHHHHHHHHheeeecCCCcccCChHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998876 35544 44567788999998874321 23469999999999999999
Q ss_pred HHHhHhhhccCCCCchhHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCcchhhhhccccchhhHHHHHHHHHHHHHHHH
Q 015064 277 LRTERISRSTKKENFLPLLGYEICVVALLSTIWVLVGGWFDSSQDFDQSPWTWTMLWDWMVTFPWVPALYTGIFSTGICL 356 (414)
Q Consensus 277 v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ll~lgv~~~~~~~ 356 (414)
+..|+..++. ++... .+....++++..+....... .. .++ +..|..++++|+++++++|
T Consensus 165 v~~r~~~~~~---~~~~~-~~~~~~~~~~l~~~~~~~~~---~~-----~~~---------~~~~~~~l~lgv~~t~~~~ 223 (293)
T PRK10532 165 LSGQRAGAEH---GPATV-AIGSLIAALIFVPIGALQAG---EA-----LWH---------WSILPLGLAVAILSTALPY 223 (293)
T ss_pred HHHHHHhccC---CchHH-HHHHHHHHHHHHHHHHHccC---cc-----cCC---------HHHHHHHHHHHHHHHHHHH
Confidence 9999987664 34444 34556666666555443321 00 111 1236667899999999999
Q ss_pred HHHHHHhccCChhHHHHHhhhHHHHHHHHHHHHhcCCCchhhHHHHHHHHHhhhccc
Q 015064 357 WIEIAAMRDVSATETAIIYGLEPLWGAGFAWFLLGERWSTAGWIGAALVLDVQIFLP 413 (414)
Q Consensus 357 ~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~~~lge~~s~~~~iG~~LIi~g~~l~~ 413 (414)
.+|++++++.++++++.+.+++|+++.+++++++||++++.+++|+++|++|+++..
T Consensus 224 ~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~ 280 (293)
T PRK10532 224 SLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGST 280 (293)
T ss_pred HHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999988753
No 7
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.97 E-value=1.7e-28 Score=233.15 Aligned_cols=255 Identities=19% Similarity=0.254 Sum_probs=212.6
Q ss_pred HhhhHHHHHHhhh-cCCHHHHHHHHHHHHHHHHHHHHHHhcCcchhhhHHHHHHHH-HHHHHHHHHHHHhhcchhHHHHH
Q 015064 137 YASDIPILKAAEE-IMHPASFCAVRFVMSAIPFLPFVFWARDDVKTRNAGIELGLW-VSLGYFVEALGLLTSDAGRASFI 214 (414)
Q Consensus 137 wg~~~~~~k~~~~-~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~gl~-~~~~~~~~~~al~~~~~~~a~~l 214 (414)
||.++++.|...+ ..++.+..+.|+..+.+++.++..++ ++++++++....|.+ ...++.++++|++++++++++++
T Consensus 1 Wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~ii 79 (260)
T TIGR00950 1 WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRRR-PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEAALL 79 (260)
T ss_pred CcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhc-cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHH
Confidence 8999999999876 58999999999999988888776555 444455555566655 56788999999999999999999
Q ss_pred HhhHHHHHHHHHH-HhcccCchhHHHHHHHHHHhhhhhcccC--CCCchhhHHHHHHHHHHHHHHHHHhHhhhccCCCCc
Q 015064 215 SLFTVIVVPLFDG-MLGAIIPAHTWFGVLISALGVGMLECSG--SPPSVGDFLNFLSAIFFGIHMLRTERISRSTKKENF 291 (414)
Q Consensus 215 ~~~~Pl~~~ll~~-~l~er~~~~~~~gi~l~~~Gv~li~~~~--~~~~~G~llal~aa~~~al~~v~~~~~~~~~~~~~~ 291 (414)
.++.|+++.+++. ++|||+++++++|++++++|+.++..++ +....|++++++++++|+.+.+..|+..++.+ .+.
T Consensus 80 ~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~-~~~ 158 (260)
T TIGR00950 80 LYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNLSINPAGLLLGLGSGISFALGTVLYKRLVKKEG-PEL 158 (260)
T ss_pred HhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcccccHHHHHHHHHHHHHHHHHHHHHhHHhhcCC-chH
Confidence 9999999999998 6899999999999999999999987654 23468999999999999999999999887644 233
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCcchhhhhccccchhhHHHHHHHHHHHHHHHHHHHHHHhccCChhHH
Q 015064 292 LPLLGYEICVVALLSTIWVLVGGWFDSSQDFDQSPWTWTMLWDWMVTFPWVPALYTGIFSTGICLWIEIAAMRDVSATET 371 (414)
Q Consensus 292 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ll~lgv~~~~~~~~l~~~al~~~~a~~~ 371 (414)
.....+++..+.++..+.....+... . . +.+.|..++++++++++++|.+|++++++.+++++
T Consensus 159 ~~~~~~~~~~~~~~l~~~~~~~~~~~--~-~--------------~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 221 (260)
T TIGR00950 159 LQFTGWVLLLGALLLLPFAWFLGPNP--Q-A--------------LSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAA 221 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCC--C-c--------------chHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHH
Confidence 44555677788777777655433111 0 0 02347778999999999999999999999999999
Q ss_pred HHHhhhHHHHHHHHHHHHhcCCCchhhHHHHHHHHHhhh
Q 015064 372 AIIYGLEPLWGAGFAWFLLGERWSTAGWIGAALVLDVQI 410 (414)
Q Consensus 372 s~~~~l~pv~a~l~~~~~lge~~s~~~~iG~~LIi~g~~ 410 (414)
+.+.+++|+++.+++++++||++++.+++|+.+++.|++
T Consensus 222 s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~~ 260 (260)
T TIGR00950 222 SILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAVL 260 (260)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999864
No 8
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.95 E-value=1.9e-25 Score=212.11 Aligned_cols=241 Identities=15% Similarity=0.148 Sum_probs=179.4
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHhcC------cch--hhh----HHHHHHHHH
Q 015064 125 RSIFLLNVITIVYASDIPILKAAEEIMHPASFCAVRFVMSAIPFLPFVFWARD------DVK--TRN----AGIELGLWV 192 (414)
Q Consensus 125 ~g~l~~lla~~~wg~~~~~~k~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~------~~~--~~~----~~~~~gl~~ 192 (414)
+|++++++++++||.++++.|.+ ++++|.+++++|+.++.++++++...+++ +.+ .++ .....|++.
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~~-~~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 80 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKLL-KPLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLLI 80 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHh-ccCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHHH
Confidence 47899999999999999999984 56999999999999999888776533221 111 111 234457777
Q ss_pred HHHHHHHHHHHhhcchhHHHHHHhhHHHHHHHHHH-HhcccCchhHHHHHHHHHHhhhhhcccCCCCchhhHHHHHHHHH
Q 015064 193 SLGYFVEALGLLTSDAGRASFISLFTVIVVPLFDG-MLGAIIPAHTWFGVLISALGVGMLECSGSPPSVGDFLNFLSAIF 271 (414)
Q Consensus 193 ~~~~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~-~l~er~~~~~~~gi~l~~~Gv~li~~~~~~~~~G~llal~aa~~ 271 (414)
+.++.++++|++++++++++++.++.|++++++++ ++|||++++++++++++++|++++..++++. ..++++++++
T Consensus 81 ~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~~~---~~~~l~aa~~ 157 (256)
T TIGR00688 81 GFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKGSL---PWEALVLAFS 157 (256)
T ss_pred HHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcCCc---hHHHHHHHHH
Confidence 88889999999999999999999999999999998 7999999999999999999999887543222 1468999999
Q ss_pred HHHHHHHHhHhhhccCCCCchhHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCcchhhhhccccchhhHHHHHHHHHHH
Q 015064 272 FGIHMLRTERISRSTKKENFLPLLGYEICVVALLSTIWVLVGGWFDSSQDFDQSPWTWTMLWDWMVTFPWVPALYTGIFS 351 (414)
Q Consensus 272 ~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ll~lgv~~ 351 (414)
|++|.+..|+..++. ........ ........+........ .....+ . .+.|..++++|++
T Consensus 158 ~a~~~i~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~--~-----------~~~~~~l~~~g~~- 217 (256)
T TIGR00688 158 FTAYGLIRKALKNTD----LAGFCLET-LSLMPVAIYYLLQTDFA-TVQQTN--P-----------FPIWLLLVLAGLI- 217 (256)
T ss_pred HHHHHHHHhhcCCCC----cchHHHHH-HHHHHHHHHHHHHhccC-cccccC--c-----------hhHHHHHHHHHHH-
Confidence 999999999976531 12221111 11111111111111111 000000 0 1237778888876
Q ss_pred HHHHHHHHHHHhccCChhHHHHHhhhHHHHHHHHHHHH
Q 015064 352 TGICLWIEIAAMRDVSATETAIIYGLEPLWGAGFAWFL 389 (414)
Q Consensus 352 ~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~~~ 389 (414)
+.++|.++++++|+.++++++++.|++|+++.+++.++
T Consensus 218 t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 218 TGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence 88999999999999999999999999999999999875
No 9
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.94 E-value=3.7e-25 Score=213.07 Aligned_cols=267 Identities=14% Similarity=0.134 Sum_probs=199.9
Q ss_pred HHHHHHHHHHHhhhHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHh--cCcc----hh-hhHHHHHHHHHHHHHHHH
Q 015064 127 IFLLNVITIVYASDIPILKAAEEIMHPASFCAVRFVMSAIPFLPFVFWA--RDDV----KT-RNAGIELGLWVSLGYFVE 199 (414)
Q Consensus 127 ~l~~lla~~~wg~~~~~~k~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~--~~~~----~~-~~~~~~~gl~~~~~~~~~ 199 (414)
+++.++++++|+...+..|...++-++. .+++.....++++++..++ ++.+ +. +...+..++....++.++
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADKEPDF--LWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFLGL 80 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCchhHH--HHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHHHH
Confidence 5678899999999999999766654443 4777777777777776653 2111 12 222333455677888999
Q ss_pred HHHHhhcchhHHHHHHhhHHHHHHHHHH-HhcccCchhHHHHHHHHHHhhhhhcccCC--CCchhhHHHHHHHHHHHHHH
Q 015064 200 ALGLLTSDAGRASFISLFTVIVVPLFDG-MLGAIIPAHTWFGVLISALGVGMLECSGS--PPSVGDFLNFLSAIFFGIHM 276 (414)
Q Consensus 200 ~~al~~~~~~~a~~l~~~~Pl~~~ll~~-~l~er~~~~~~~gi~l~~~Gv~li~~~~~--~~~~G~llal~aa~~~al~~ 276 (414)
++|+++++++.++.+.++.|+++.++++ ++|||+++++++|+++++.|++++..++. ....|+.++++++++|++|.
T Consensus 81 ~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~~~~~~g~~~~l~aal~~a~~~ 160 (281)
T TIGR03340 81 AQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFAQHRRKAYAWALAAALGTAIYS 160 (281)
T ss_pred HHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999998 69999999999999999999999876532 23468889999999999999
Q ss_pred HHHhHhhhccCCC-CchhHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCcchhhhhccccchhhHHHHHHHHHHHHHHH
Q 015064 277 LRTERISRSTKKE-NFLPLLGYEICVVALLSTIWVLVGGWFDSSQDFDQSPWTWTMLWDWMVTFPWVPALYTGIFSTGIC 355 (414)
Q Consensus 277 v~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ll~lgv~~~~~~ 355 (414)
+..|+..++.++. +......+.+...++...+.....+. .... .. +..++.+++.+++.+.++
T Consensus 161 i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~------------~~~~~~~~~~~~~~s~l~ 224 (281)
T TIGR03340 161 LSDKAAALGVPAFYSALGYLGIGFLAMGWPFLLLYLKRHG-RSMF---PY------------ARQILPSATLGGLMIGGA 224 (281)
T ss_pred hhccccccchhcccccHHHHHHHHHHHHHHHHHHHHHHhc-cchh---hh------------HHHHHHHHHHHHHHHHHH
Confidence 9988865443321 11222223322221221111111111 0000 00 112556788899999999
Q ss_pred HHHHHHHhccCChhHHHHHhhhHHHHHHHHHHHHhcCCCchhhHHHHHHHHHhhhc
Q 015064 356 LWIEIAAMRDVSATETAIIYGLEPLWGAGFAWFLLGERWSTAGWIGAALVLDVQIF 411 (414)
Q Consensus 356 ~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~~~lge~~s~~~~iG~~LIi~g~~l 411 (414)
|.+|++++++.++++++.+.+++|+++.+++++++||+++..+++|+++|++|+++
T Consensus 225 ~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 225 YALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred HHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 99999999999999999999999999999999999999999999999999999875
No 10
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=99.94 E-value=2.3e-24 Score=213.56 Aligned_cols=281 Identities=10% Similarity=0.065 Sum_probs=215.3
Q ss_pred hHHHHHHHHHHHHHhhhHHHHHHhhhcCC-HHHHHHHHHHHHHHHHHHHHHHh--c-Cc----chhhhHHHHHHHHHHHH
Q 015064 124 IRSIFLLNVITIVYASDIPILKAAEEIMH-PASFCAVRFVMSAIPFLPFVFWA--R-DD----VKTRNAGIELGLWVSLG 195 (414)
Q Consensus 124 ~~g~l~~lla~~~wg~~~~~~k~~~~~~~-p~~~~~~R~~~a~l~ll~~~~~~--~-~~----~~~~~~~~~~gl~~~~~ 195 (414)
.+..++.+.-..+=.......|.+.+.++ |..+.++|++++.+++.++...+ + ++ ++.++..+..|+++...
T Consensus 48 ~~~~~~~~~wy~~s~~~~~~nK~vl~~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~llp~gl~~~~~ 127 (350)
T PTZ00343 48 WKLALLFLTWYALNVLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNFLPQGLCHLFV 127 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 44455555555555666778899999999 99999999999987765544321 1 11 12345667788888777
Q ss_pred HHHHHHHHhhcchhHHHHHHhhHHHHHHHHHH-HhcccCchhHHHHHHHHHHhhhhhcccCCCC-chhhHHHHHHHHHHH
Q 015064 196 YFVEALGLLTSDAGRASFISLFTVIVVPLFDG-MLGAIIPAHTWFGVLISALGVGMLECSGSPP-SVGDFLNFLSAIFFG 273 (414)
Q Consensus 196 ~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~-~l~er~~~~~~~gi~l~~~Gv~li~~~~~~~-~~G~llal~aa~~~a 273 (414)
+...+.|+++++++.++++..+.|+++++++. ++|||++++++++++++++|+.+....+..+ ..|++++++++++++
T Consensus 128 ~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~~~~~~G~~~~l~s~~~~a 207 (350)
T PTZ00343 128 HFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKELHFTWLAFWCAMLSNLGSS 207 (350)
T ss_pred HHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccchhHHHHHHHHHHHHHHHH
Confidence 77788999999999999999999999999998 7999999999999999999999988655444 469999999999999
Q ss_pred HHHHHHhHhhhccC----CCCchhHHHHHHHHHHHHHHHHHHHhccCCCCCCC-C-CCcchhhhhccccchhhHHHHHHH
Q 015064 274 IHMLRTERISRSTK----KENFLPLLGYEICVVALLSTIWVLVGGWFDSSQDF-D-QSPWTWTMLWDWMVTFPWVPALYT 347 (414)
Q Consensus 274 l~~v~~~~~~~~~~----~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~w~~~~~~~~ll~l 347 (414)
++.+..|+..++.+ +.++.....++...++++.+|+....+........ . ...+ + ...+..+++
T Consensus 208 ~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~------~---~~~~~~~l~- 277 (350)
T PTZ00343 208 LRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANM------T---NYTKGIIIF- 277 (350)
T ss_pred HHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcc------c---ccchHHHHH-
Confidence 99999999876543 24455566666788888888876644321100000 0 0000 0 001233444
Q ss_pred HHHHHHHHHHHHHH----HhccCChhHHHHHhhhHHHHHHHHHHHHhcCCCchhhHHHHHHHHHhhhcccC
Q 015064 348 GIFSTGICLWIEIA----AMRDVSATETAIIYGLEPLWGAGFAWFLLGERWSTAGWIGAALVLDVQIFLPR 414 (414)
Q Consensus 348 gv~~~~~~~~l~~~----al~~~~a~~~s~~~~l~pv~a~l~~~~~lge~~s~~~~iG~~LIi~g~~l~~r 414 (414)
.++.+++.+.+|+. +++++++...++..+++|+++++++++++||++++.+++|++++++|+++.++
T Consensus 278 ~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~ 348 (350)
T PTZ00343 278 KIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSL 348 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhh
Confidence 35556888888885 99999999999999999999999999999999999999999999999988653
No 11
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=99.94 E-value=6.6e-25 Score=213.47 Aligned_cols=271 Identities=11% Similarity=0.031 Sum_probs=205.6
Q ss_pred hhhHHHHHHhhhc-CCHHHHHHHHHHHHHHHHHHHHHH--hcC---cchhhhHHHHHHHHHHHHHHHHHHHHhhcchhHH
Q 015064 138 ASDIPILKAAEEI-MHPASFCAVRFVMSAIPFLPFVFW--ARD---DVKTRNAGIELGLWVSLGYFVEALGLLTSDAGRA 211 (414)
Q Consensus 138 g~~~~~~k~~~~~-~~p~~~~~~R~~~a~l~ll~~~~~--~~~---~~~~~~~~~~~gl~~~~~~~~~~~al~~~~~~~a 211 (414)
....+..|.+.++ -.|..+++.|+.++.+.+.+.... +++ +++++++.+..|++....+.+.++|+++++++.+
T Consensus 15 ~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~s~s~~ 94 (302)
T TIGR00817 15 VYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVAIVHTIGHVTSNVSLSKVAVSFT 94 (302)
T ss_pred HHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH
Confidence 3344678999987 679999999999988877665211 111 3456667788899988888999999999999999
Q ss_pred HHHHhhHHHHHHHHHH-HhcccCchhHHHHHHHHHHhhhhhcccCCCC-chhhHHHHHHHHHHHHHHHHHhHhhhccCCC
Q 015064 212 SFISLFTVIVVPLFDG-MLGAIIPAHTWFGVLISALGVGMLECSGSPP-SVGDFLNFLSAIFFGIHMLRTERISRSTKKE 289 (414)
Q Consensus 212 ~~l~~~~Pl~~~ll~~-~l~er~~~~~~~gi~l~~~Gv~li~~~~~~~-~~G~llal~aa~~~al~~v~~~~~~~~~~~~ 289 (414)
+++.++.|++++++++ ++|||++++++++++++++|+.+....+... ..|++++++++++|++|.+..||..++. +.
T Consensus 95 ~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~-~~ 173 (302)
T TIGR00817 95 HTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTELSFNWAGFLSAMISNITFVSRNIFSKKAMTIK-SL 173 (302)
T ss_pred HHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCcccccHHHHHHHHHHHHHHHHHHHHHHHhhccC-CC
Confidence 9999999999999998 6899999999999999999998876444333 4599999999999999999999987632 25
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCcchhhhhccccchhhHHHHHHHHHHHHHHHHHHHHHHhccCChh
Q 015064 290 NFLPLLGYEICVVALLSTIWVLVGGWFDSSQDFDQSPWTWTMLWDWMVTFPWVPALYTGIFSTGICLWIEIAAMRDVSAT 369 (414)
Q Consensus 290 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ll~lgv~~~~~~~~l~~~al~~~~a~ 369 (414)
|+...+.++...+.+...|.....+...... .+...+.+ .+.....+...+..+..+....+.++++++++.+|+
T Consensus 174 ~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~ 248 (302)
T TIGR00817 174 DKTNLYAYISIMSLFLLSPPAFITEGPPFLP-HGFMQAIS----GVNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPL 248 (302)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHcchHHHH-HHHHHhhc----ccCchHHHHHHHHHHHHHHHHHHHHHHHHHccCCch
Confidence 6788899999999988888766543211100 00000000 000001122222333323333335666899999999
Q ss_pred HHHHHhhhHHHHHHHHHHHHhcCCCchhhHHHHHHHHHhhhcccC
Q 015064 370 ETAIIYGLEPLWGAGFAWFLLGERWSTAGWIGAALVLDVQIFLPR 414 (414)
Q Consensus 370 ~~s~~~~l~pv~a~l~~~~~lge~~s~~~~iG~~LIi~g~~l~~r 414 (414)
+.++..+++|+++++++++++||+++..+++|++++++|+++.+|
T Consensus 249 t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~ 293 (302)
T TIGR00817 249 THSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSR 293 (302)
T ss_pred HHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999988653
No 12
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=99.94 E-value=7.6e-28 Score=218.72 Aligned_cols=269 Identities=16% Similarity=0.156 Sum_probs=214.8
Q ss_pred cchHHHHHHHHHHHHHhhhHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHhc----CcchhhhHHHHHHHHHHHHHH
Q 015064 122 KKIRSIFLLNVITIVYASDIPILKAAEEIMHPASFCAVRFVMSAIPFLPFVFWAR----DDVKTRNAGIELGLWVSLGYF 197 (414)
Q Consensus 122 ~~~~g~l~~lla~~~wg~~~~~~k~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~----~~~~~~~~~~~~gl~~~~~~~ 197 (414)
++.+|.++.-++ .++.+..+..+...+ .+|.+..-.|+++-.++..+-...++ .+...|++++++|+.++.+..
T Consensus 35 ~p~~gl~l~~vs-~ff~~~~vv~t~~~e-~~p~e~a~~r~l~~mlit~pcliy~~~~v~gp~g~R~~LiLRg~mG~tgvm 112 (346)
T KOG4510|consen 35 KPNLGLLLLTVS-YFFNSCMVVSTKVLE-NDPMELASFRLLVRMLITYPCLIYYMQPVIGPEGKRKWLILRGFMGFTGVM 112 (346)
T ss_pred CCccCceehhhH-HHHhhHHHhhhhhhc-cChhHhhhhhhhhehhhhheEEEEEeeeeecCCCcEEEEEeehhhhhhHHH
Confidence 445677777777 444444454444444 69999999997776666665544443 345667888999999999999
Q ss_pred HHHHHHhhcchhHHHHHHhhHHHHHHHHHH-HhcccCchhHHHHHHHHHHhhhhhcccCCC---------------Cchh
Q 015064 198 VEALGLLTSDAGRASFISLFTVIVVPLFDG-MLGAIIPAHTWFGVLISALGVGMLECSGSP---------------PSVG 261 (414)
Q Consensus 198 ~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~-~l~er~~~~~~~gi~l~~~Gv~li~~~~~~---------------~~~G 261 (414)
+.|||++|.+.++|+++.++.|.|+.++++ ++|||.++.+.++..+.+.||+++++|... ...|
T Consensus 113 lmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~~~~~g 192 (346)
T KOG4510|consen 113 LMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVEYDIPG 192 (346)
T ss_pred HHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccccccccccccCCc
Confidence 999999999999999999999999999999 799999999999999999999999977421 2578
Q ss_pred hHHHHHHHHHHHHHHHHHhHhhhccCCCCchhHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCcchhhhhccccchhhH
Q 015064 262 DFLNFLSAIFFGIHMLRTERISRSTKKENFLPLLGYEICVVALLSTIWVLVGGWFDSSQDFDQSPWTWTMLWDWMVTFPW 341 (414)
Q Consensus 262 ~llal~aa~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~ 341 (414)
.+.++.++++.+.-+++.|+++++.+ ......|..+++.+..+......+. ...+ .. .++|
T Consensus 193 t~aai~s~lf~asvyIilR~iGk~~h---~~msvsyf~~i~lV~s~I~~~~ig~-~~lP-~c--------------gkdr 253 (346)
T KOG4510|consen 193 TVAAISSVLFGASVYIILRYIGKNAH---AIMSVSYFSLITLVVSLIGCASIGA-VQLP-HC--------------GKDR 253 (346)
T ss_pred hHHHHHhHhhhhhHHHHHHHhhcccc---EEEEehHHHHHHHHHHHHHHhhccc-eecC-cc--------------ccce
Confidence 89999999999999999999998854 4455556566666665544333321 1111 11 2347
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCChhHHHHHhhhHHHHHHHHHHHHhcCCCchhhHHHHHHHHHhhhcc
Q 015064 342 VPALYTGIFSTGICLWIEIAAMRDVSATETAIIYGLEPLWGAGFAWFLLGERWSTAGWIGAALVLDVQIFL 412 (414)
Q Consensus 342 ~~ll~lgv~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~~~lge~~s~~~~iG~~LIi~g~~l~ 412 (414)
+.++.+|+++ .+++.+.++++|+..+++++++.+++.+++++++.++|||.|++++|.|+++|+.+.+++
T Consensus 254 ~l~~~lGvfg-figQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~ 323 (346)
T KOG4510|consen 254 WLFVNLGVFG-FIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWV 323 (346)
T ss_pred EEEEEehhhh-hHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHH
Confidence 7788889875 668999999999999999999999999999999999999999999999999999988875
No 13
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.92 E-value=2.9e-22 Score=192.18 Aligned_cols=269 Identities=25% Similarity=0.314 Sum_probs=211.2
Q ss_pred chHHHHHHHHHHHHHhhhHHHHHHhhhc-CCHHHHHHHHHHHHHHHHHHHHHHhc--Ccchhh--hHHHHH-HHHHHHHH
Q 015064 123 KIRSIFLLNVITIVYASDIPILKAAEEI-MHPASFCAVRFVMSAIPFLPFVFWAR--DDVKTR--NAGIEL-GLWVSLGY 196 (414)
Q Consensus 123 ~~~g~l~~lla~~~wg~~~~~~k~~~~~-~~p~~~~~~R~~~a~l~ll~~~~~~~--~~~~~~--~~~~~~-gl~~~~~~ 196 (414)
...+....++..+.|+......|...++ .++....+.|...+.+...+...+++ ..+... ++.... ++......
T Consensus 5 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (292)
T COG0697 5 LLLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEPRGLRPALRPWLLLLLLALLGLALPF 84 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHH
Confidence 3467788888889999999999999887 77777778899998888554444332 122221 233333 44567788
Q ss_pred HHHHHHHhhcchhHHHHHHhhHHHHHHHHHH-H-hcccCchhHHHHHHHHHHhhhhhcccCCCC----chhhHHHHHHHH
Q 015064 197 FVEALGLLTSDAGRASFISLFTVIVVPLFDG-M-LGAIIPAHTWFGVLISALGVGMLECSGSPP----SVGDFLNFLSAI 270 (414)
Q Consensus 197 ~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~-~-l~er~~~~~~~gi~l~~~Gv~li~~~~~~~----~~G~llal~aa~ 270 (414)
.+++.++++++++.++.+.++.|+++.+++. + +|||+++++++++++++.|++++..++... ..|+++++++++
T Consensus 85 ~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~~~~g~~~~l~a~~ 164 (292)
T COG0697 85 LLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGILSLLGLLLALAAAL 164 (292)
T ss_pred HHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999996 5 599999999999999999999999876543 479999999999
Q ss_pred HHHHHHHHHhHhhhccCCCCchhHHH-HHHHHHHHHHHHHHHHhccCCCCCCCCCCcchhhhhccccchhhHHHHHHHHH
Q 015064 271 FFGIHMLRTERISRSTKKENFLPLLG-YEICVVALLSTIWVLVGGWFDSSQDFDQSPWTWTMLWDWMVTFPWVPALYTGI 349 (414)
Q Consensus 271 ~~al~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ll~lgv 349 (414)
+++++.+..|+.. + .++..... +++........+...... . .+. . ...|..+.+.|+
T Consensus 165 ~~a~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~---~-----------~~~~~~~~~~g~ 222 (292)
T COG0697 165 LWALYTALVKRLS-R---LGPVTLALLLQLLLALLLLLLFFLSGF--G--API---L-----------SRAWLLLLYLGV 222 (292)
T ss_pred HHHHHHHHHHHhc-C---CChHHHHHHHHHHHHHHHHHHHHhccc--c--ccC---C-----------HHHHHHHHHHHH
Confidence 9999999999887 3 33444444 333322222222111111 1 000 0 224788899999
Q ss_pred HHHHHHHHHHHHHhccCChhHHHHHhhhHHHHHHHHHHHHhcCCCchhhHHHHHHHHHhhhccc
Q 015064 350 FSTGICLWIEIAAMRDVSATETAIIYGLEPLWGAGFAWFLLGERWSTAGWIGAALVLDVQIFLP 413 (414)
Q Consensus 350 ~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~~~lge~~s~~~~iG~~LIi~g~~l~~ 413 (414)
+++++++.++++++++.++..++++.+++|+++.+++++++||.++..+++|+.+++.|+++..
T Consensus 223 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~ 286 (292)
T COG0697 223 FSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLAS 286 (292)
T ss_pred HHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999999998764
No 14
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=99.91 E-value=3.3e-22 Score=181.05 Aligned_cols=260 Identities=20% Similarity=0.174 Sum_probs=218.4
Q ss_pred HHHHHHHHHHHHhhhHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHhcC--cchhhhHHHHHHHHHHHHHHHHHHHH
Q 015064 126 SIFLLNVITIVYASDIPILKAAEEIMHPASFCAVRFVMSAIPFLPFVFWARD--DVKTRNAGIELGLWVSLGYFVEALGL 203 (414)
Q Consensus 126 g~l~~lla~~~wg~~~~~~k~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~--~~~~~~~~~~~gl~~~~~~~~~~~al 203 (414)
.++.++.+.+.--....+.|.+...++|...+++|..++.++++++++..|+ .+++++..+..|+.....+.+||.++
T Consensus 13 p~~~ll~amvsiq~Gas~Ak~LFP~vG~~g~t~lRl~~aaLIll~l~RPwr~r~~~~~~~~~~~yGvsLg~MNl~FY~si 92 (292)
T COG5006 13 PILALLVAMVSIQSGASFAKSLFPLVGAAGVTALRLAIAALILLALFRPWRRRLSKPQRLALLAYGVSLGGMNLLFYLSI 92 (292)
T ss_pred cHHHHHHHHHHHHhhHHHHHHHccccChhhHHHHHHHHHHHHHHHHhhHHHhccChhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 4677777877777778899999999999999999999999999998876554 35677888888999999999999999
Q ss_pred hhcchhHHHHHHhhHHHHHHHHHHHhcccCchhHHHHHHHHHHhhhhhcccC----CCCchhhHHHHHHHHHHHHHHHHH
Q 015064 204 LTSDAGRASFISLFTVIVVPLFDGMLGAIIPAHTWFGVLISALGVGMLECSG----SPPSVGDFLNFLSAIFFGIHMLRT 279 (414)
Q Consensus 204 ~~~~~~~a~~l~~~~Pl~~~ll~~~l~er~~~~~~~gi~l~~~Gv~li~~~~----~~~~~G~llal~aa~~~al~~v~~ 279 (414)
+++|.+.+..+.++-|+.+++++ ..+.++.+-+.+++.|+.++.-.+ ..+..|..+++.++.||++|.+..
T Consensus 93 ~riPlGiAVAiEF~GPL~vA~~~-----sRr~~d~vwvaLAvlGi~lL~p~~~~~~~lDp~Gv~~Al~AG~~Wa~YIv~G 167 (292)
T COG5006 93 ERIPLGIAVAIEFTGPLAVALLS-----SRRLRDFVWVALAVLGIWLLLPLGQSVWSLDPVGVALALGAGACWALYIVLG 167 (292)
T ss_pred HhccchhhhhhhhccHHHHHHHh-----ccchhhHHHHHHHHHHHHhheeccCCcCcCCHHHHHHHHHHhHHHHHHHHHc
Confidence 99999999999999999888873 334566777777888888877433 346899999999999999999999
Q ss_pred hHhhhccCCCCchhHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCcchhhhhccccchhhHHHHHHHHHHHHHHHHHHH
Q 015064 280 ERISRSTKKENFLPLLGYEICVVALLSTIWVLVGGWFDSSQDFDQSPWTWTMLWDWMVTFPWVPALYTGIFSTGICLWIE 359 (414)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ll~lgv~~~~~~~~l~ 359 (414)
+|..+.. +...-+...+.++.++.+|+......+.-. +|......+.++++++.+.|.+-
T Consensus 168 ~r~g~~~---~g~~g~a~gm~vAaviv~Pig~~~ag~~l~-----------------~p~ll~laLgvavlSSalPYsLE 227 (292)
T COG5006 168 QRAGRAE---HGTAGVAVGMLVAALIVLPIGAAQAGPALF-----------------SPSLLPLALGVAVLSSALPYSLE 227 (292)
T ss_pred chhcccC---CCchHHHHHHHHHHHHHhhhhhhhcchhhc-----------------ChHHHHHHHHHHHHhcccchHHH
Confidence 9998643 335556677888888888887654322111 12336667888999999999999
Q ss_pred HHHhccCChhHHHHHhhhHHHHHHHHHHHHhcCCCchhhHHHHHHHHHhhh
Q 015064 360 IAAMRDVSATETAIIYGLEPLWGAGFAWFLLGERWSTAGWIGAALVLDVQI 410 (414)
Q Consensus 360 ~~al~~~~a~~~s~~~~l~pv~a~l~~~~~lge~~s~~~~iG~~LIi~g~~ 410 (414)
..++++.+....+.+.++||.++.+.|++++||.+|+.||.|+++|+.+..
T Consensus 228 miAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsa 278 (292)
T COG5006 228 MIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASA 278 (292)
T ss_pred HHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999998765
No 15
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=99.88 E-value=1.1e-19 Score=169.13 Aligned_cols=266 Identities=17% Similarity=0.187 Sum_probs=210.5
Q ss_pred chHHHHHHHHHHHHHhhhHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHhcCcc---------hhhhHHHHHHHHHH
Q 015064 123 KIRSIFLLNVITIVYASDIPILKAAEEIMHPASFCAVRFVMSAIPFLPFVFWARDDV---------KTRNAGIELGLWVS 193 (414)
Q Consensus 123 ~~~g~l~~lla~~~wg~~~~~~k~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~---------~~~~~~~~~gl~~~ 193 (414)
..+|+++.+.+.++||..+...|.+.+ +++.++...|.+.+..+++.+....|+.+ +......+.++...
T Consensus 5 ~~~Gil~~l~Ay~lwG~lp~y~kll~~-~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li~ 83 (293)
T COG2962 5 SRKGILLALLAYLLWGLLPLYFKLLEP-LPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLIG 83 (293)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHcc-CCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 357999999999999999999999765 99999999999999988876665543321 12222344477788
Q ss_pred HHHHHHHHHHhhcchhHHHHHHhhHHHHHHHHHH-HhcccCchhHHHHHHHHHHhhhhhcccCCCCchhhHHHHHHHHHH
Q 015064 194 LGYFVEALGLLTSDAGRASFISLFTVIVVPLFDG-MLGAIIPAHTWFGVLISALGVGMLECSGSPPSVGDFLNFLSAIFF 272 (414)
Q Consensus 194 ~~~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~-~l~er~~~~~~~gi~l~~~Gv~li~~~~~~~~~G~llal~aa~~~ 272 (414)
.++..|.+|..+...-++++-.+..|++..+++. ++|||+++.|+++++++.+||.......++.+ ..++.=+++|
T Consensus 84 ~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~lp---wval~la~sf 160 (293)
T COG2962 84 LNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGSLP---WVALALALSF 160 (293)
T ss_pred HHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCCCc---HHHHHHHHHH
Confidence 8999999999999999999999999999999998 79999999999999999999999876533221 4677778999
Q ss_pred HHHHHHHhHhhhccCCCCchhHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCcchhhhhccccchhhHHHHHHHHHHHH
Q 015064 273 GIHMLRTERISRSTKKENFLPLLGYEICVVALLSTIWVLVGGWFDSSQDFDQSPWTWTMLWDWMVTFPWVPALYTGIFST 352 (414)
Q Consensus 273 al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ll~lgv~~~ 352 (414)
+.|...-|+.. .|..+-.+...+.-..+.+.+........+ ...... +..|.+++..|.+ +
T Consensus 161 ~~Ygl~RK~~~-----v~a~~g~~lE~l~l~p~al~yl~~l~~~~~--~~~~~~-----------~~~~~LLv~aG~v-T 221 (293)
T COG2962 161 GLYGLLRKKLK-----VDALTGLTLETLLLLPVALIYLLFLADSGQ--FLQQNA-----------NSLWLLLVLAGLV-T 221 (293)
T ss_pred HHHHHHHHhcC-----CchHHhHHHHHHHHhHHHHHHHHHHhcCch--hhhcCC-----------chHHHHHHHhhHH-H
Confidence 99999777653 455666666666666665555544432221 011011 1225566666664 7
Q ss_pred HHHHHHHHHHhccCChhHHHHHhhhHHHHHHHHHHHHhcCCCchhhHHHHHHHHHhhhc
Q 015064 353 GICLWIEIAAMRDVSATETAIIYGLEPLWGAGFAWFLLGERWSTAGWIGAALVLDVQIF 411 (414)
Q Consensus 353 ~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~~~lge~~s~~~~iG~~LIi~g~~l 411 (414)
.++..++..|-|+++-+..+.++|.+|..-.+++.+++||+++..+++..++|..|.++
T Consensus 222 avpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l 280 (293)
T COG2962 222 AVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALAL 280 (293)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999999998875
No 16
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.87 E-value=1.3e-19 Score=175.12 Aligned_cols=258 Identities=13% Similarity=0.114 Sum_probs=198.0
Q ss_pred HHHHHHHHHHHHhhhHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHhcCcchh----hhHHHHHHHHHHHHHHHHHH
Q 015064 126 SIFLLNVITIVYASDIPILKAAEEIMHPASFCAVRFVMSAIPFLPFVFWARDDVKT----RNAGIELGLWVSLGYFVEAL 201 (414)
Q Consensus 126 g~l~~lla~~~wg~~~~~~k~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~----~~~~~~~gl~~~~~~~~~~~ 201 (414)
++++.++++++||+..+..|... +.++.++. |..++.+++..+....+.+++. ....+..|+....++.+++.
T Consensus 2 ~~l~~lia~~~wGs~g~~~k~~~-g~~~~~~~--~~~~g~l~~~~~~~~~~~~~~~~~~~~~~g~l~G~~w~ig~~~~~~ 78 (290)
T TIGR00776 2 DILIALIPALFWGSFVLINVKIG-GGPYSQTL--GTTFGALILSIAIAIFVLPEFWALSIFLVGLLSGAFWALGQINQFK 78 (290)
T ss_pred chHHHHHHHHHHhhhHHHHhccC-CCHHHHHH--HHHHHHHHHHHHHHHHhCCcccccHHHHHHHHHHHHHHhhhhhHHH
Confidence 47889999999999999999876 67787775 7877777776554443332222 23344456667788899999
Q ss_pred HHhhcchhHHHHHHh-hHHHHHHHHHH-HhcccCchhH----HHHHHHHHHhhhhhcccCC---------CCchhhHHHH
Q 015064 202 GLLTSDAGRASFISL-FTVIVVPLFDG-MLGAIIPAHT----WFGVLISALGVGMLECSGS---------PPSVGDFLNF 266 (414)
Q Consensus 202 al~~~~~~~a~~l~~-~~Pl~~~ll~~-~l~er~~~~~----~~gi~l~~~Gv~li~~~~~---------~~~~G~llal 266 (414)
+.++++.+.+..+.. +.++++.+.+. ++|||.++++ .+|+++.++|++++...+. ....|.++++
T Consensus 79 ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~~~~~~~~Gi~~~l 158 (290)
T TIGR00776 79 SMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGIKSEFNFKKGILLLL 158 (290)
T ss_pred HHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEeccccccccccccchhhHHHHHH
Confidence 999999999988888 88888899998 6999999999 9999999999999875321 1258999999
Q ss_pred HHHHHHHHHHHHHhHhhhccCCCCchhH---HHHHHHHHHHHHHHHHHHhccCCCCCCCCCCcchhhhhccccchhhHHH
Q 015064 267 LSAIFFGIHMLRTERISRSTKKENFLPL---LGYEICVVALLSTIWVLVGGWFDSSQDFDQSPWTWTMLWDWMVTFPWVP 343 (414)
Q Consensus 267 ~aa~~~al~~v~~~~~~~~~~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ 343 (414)
+++++|+.|.+..|+.. + ++... ..+.++.++++..+.. . .. .++. ++.++.
T Consensus 159 ~sg~~y~~~~~~~~~~~--~---~~~~~~~~~~~g~~~~~~~~~~~~--~---~~------~~~~---------~~~~~~ 213 (290)
T TIGR00776 159 MSTIGYLVYVVVAKAFG--V---DGLSVLLPQAIGMVIGGIIFNLGH--I---LA------KPLK---------KYAILL 213 (290)
T ss_pred HHHHHHHHHHHHHHHcC--C---CcceehhHHHHHHHHHHHHHHHHH--h---cc------cchH---------HHHHHH
Confidence 99999999999999762 3 34445 3333333443333221 0 00 0110 122333
Q ss_pred HHHHHHHHHHHHHHHHHHHhc-cCChhHHHHHhhhHHHHHHHHHHHHhcCCCchhhH----HHHHHHHHhhhcc
Q 015064 344 ALYTGIFSTGICLWIEIAAMR-DVSATETAIIYGLEPLWGAGFAWFLLGERWSTAGW----IGAALVLDVQIFL 412 (414)
Q Consensus 344 ll~lgv~~~~~~~~l~~~al~-~~~a~~~s~~~~l~pv~a~l~~~~~lge~~s~~~~----iG~~LIi~g~~l~ 412 (414)
.+..|++ .++++.+|..+.+ +.+++.++.+.+++|+.+.+++++++||..++.++ +|.++|+.|+++.
T Consensus 214 ~~~~Gi~-~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~ 286 (290)
T TIGR00776 214 NILPGLM-WGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANIL 286 (290)
T ss_pred HHHHHHH-HHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHH
Confidence 4448887 6999999999999 99999999999999999999999999999999999 9999999998764
No 17
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.84 E-value=1.8e-18 Score=168.20 Aligned_cols=273 Identities=16% Similarity=0.158 Sum_probs=211.1
Q ss_pred chHHHHHHHHHHHHHhhhHHHHHHhhhc-CC-HHHHHHHHHHHHHHHHHHHHHHhcCc-------chhhhHHHHHHHHHH
Q 015064 123 KIRSIFLLNVITIVYASDIPILKAAEEI-MH-PASFCAVRFVMSAIPFLPFVFWARDD-------VKTRNAGIELGLWVS 193 (414)
Q Consensus 123 ~~~g~l~~lla~~~wg~~~~~~k~~~~~-~~-p~~~~~~R~~~a~l~ll~~~~~~~~~-------~~~~~~~~~~gl~~~ 193 (414)
.++.+++.=+.+++-..+...+..+.+. .+ |....++-+..-.++..++...|++. +++++++++++++..
T Consensus 11 ~~~~~~lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~Dv 90 (334)
T PF06027_consen 11 FWIVLLLGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLDV 90 (334)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHHH
Confidence 3566666666777777778887777653 22 55555666655555555555544332 345667788899999
Q ss_pred HHHHHHHHHHhhcchhHHHHHHhhHHHHHHHHHH-HhcccCchhHHHHHHHHHHhhhhhcccC----------CCCchhh
Q 015064 194 LGYFVEALGLLTSDAGRASFISLFTVIVVPLFDG-MLGAIIPAHTWFGVLISALGVGMLECSG----------SPPSVGD 262 (414)
Q Consensus 194 ~~~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~-~l~er~~~~~~~gi~l~~~Gv~li~~~~----------~~~~~G~ 262 (414)
.++++.+.|++|++.+.++++..+.-+++.++++ ++|||.++.|++|+++++.|++++...| .....|+
T Consensus 91 ~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GD 170 (334)
T PF06027_consen 91 EANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGD 170 (334)
T ss_pred HHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhH
Confidence 9999999999999999999999999999999999 7999999999999999999999987542 1246999
Q ss_pred HHHHHHHHHHHHHHHHHhHhhhccCCCCchhHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCcchhhhhccccchhhHH
Q 015064 263 FLNFLSAIFFGIHMLRTERISRSTKKENFLPLLGYEICVVALLSTIWVLVGGWFDSSQDFDQSPWTWTMLWDWMVTFPWV 342 (414)
Q Consensus 263 llal~aa~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~ 342 (414)
+++++++++||++.+..++..++. +......+..+.+.++..+.....+. .+... ..|++ +.+.
T Consensus 171 ll~l~~a~lya~~nV~~E~~v~~~---~~~~~lg~~Glfg~ii~~iq~~ile~-~~i~~---~~w~~---------~~~~ 234 (334)
T PF06027_consen 171 LLALLGAILYAVSNVLEEKLVKKA---PRVEFLGMLGLFGFIISGIQLAILER-SGIES---IHWTS---------QVIG 234 (334)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccC---CHHHHHHHHHHHHHHHHHHHHHheeh-hhhhc---cCCCh---------hhHH
Confidence 999999999999999999998873 45677777777777777665554432 12211 12221 2233
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCChhHHHHHhhhHHHHHHHHHHHHhcCCCchhhHHHHHHHHHhhhcc
Q 015064 343 PALYTGIFSTGICLWIEIAAMRDVSATETAIIYGLEPLWGAGFAWFLLGERWSTAGWIGAALVLDVQIFL 412 (414)
Q Consensus 343 ~ll~lgv~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~~~lge~~s~~~~iG~~LIi~g~~l~ 412 (414)
. +....++..+-|.+....++..+|+...+-..+..+++++++++++|+.+++..++|.++|++|.++.
T Consensus 235 ~-~v~~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy 303 (334)
T PF06027_consen 235 L-LVGYALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVY 303 (334)
T ss_pred H-HHHHHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheE
Confidence 3 23334456667888899999999999999999999999999999999999999999999999999874
No 18
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=99.74 E-value=7.6e-17 Score=153.91 Aligned_cols=280 Identities=14% Similarity=0.193 Sum_probs=217.9
Q ss_pred cchHHHHHHHHHHHHHhhhHHHHHHhhhcC---CHHHHHHHHHHHHHHHHHHHHH----Hh----c---C----------
Q 015064 122 KKIRSIFLLNVITIVYASDIPILKAAEEIM---HPASFCAVRFVMSAIPFLPFVF----WA----R---D---------- 177 (414)
Q Consensus 122 ~~~~g~l~~lla~~~wg~~~~~~k~~~~~~---~p~~~~~~R~~~a~l~ll~~~~----~~----~---~---------- 177 (414)
+...|+.++++..++|-.+.-+.+.+.++- .|+.+++.....-.+-+.++.. ++ | .
T Consensus 11 r~~lGl~lL~~V~viWV~SSeLT~~if~~~~f~kPFfiTY~~ts~fivYL~~~~~~d~~~~~~~~R~~~~~~~~~~e~d~ 90 (416)
T KOG2765|consen 11 RWTLGLVLLLLVVVIWVASSELTQSIFEDYNFRKPFFITYLKTSLFIVYLPPFILIDAPWRILETRSKRSNHAIMEEADA 90 (416)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHhhcccCCceeEeeecccceehhhhhhhhhcchhhhhhhhccccchhhhhhhhh
Confidence 356899999999999999999999888753 4887777665544444443221 00 0 0
Q ss_pred -------------------------------c------------------chhh---------------hHHHHHHHHHH
Q 015064 178 -------------------------------D------------------VKTR---------------NAGIELGLWVS 193 (414)
Q Consensus 178 -------------------------------~------------------~~~~---------------~~~~~~gl~~~ 193 (414)
+ .+.+ +..+....+.+
T Consensus 91 e~y~~~~~~~~~~~~~l~~~~~~~~~~~~l~s~~~~~~~s~~~e~~~~~~~~~rs~l~~~~~~t~~~~ak~sl~fc~lWF 170 (416)
T KOG2765|consen 91 EGYFSACTTDKTMESGLSGPESVPDKSPLLGSGEEEKPESTNLEVREKANTKKRSNLKERGKLTATQTAKLSLFFCPLWF 170 (416)
T ss_pred hccccccccccccccccCCceeeeccccccccccccCCCCccccccccCCcccccchhhhhhhHHHHHHHHHHHHHHHHH
Confidence 0 0001 11234456678
Q ss_pred HHHHHHHHHHhhcchhHHHHHHhhHHHHHHHHHH-HhcccCchhHHHHHHHHHHhhhhhcccCC---------CCchhhH
Q 015064 194 LGYFVEALGLLTSDAGRASFISLFTVIVVPLFDG-MLGAIIPAHTWFGVLISALGVGMLECSGS---------PPSVGDF 263 (414)
Q Consensus 194 ~~~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~-~l~er~~~~~~~gi~l~~~Gv~li~~~~~---------~~~~G~l 263 (414)
.+++.+..|+.+++++..+++..++-+|+..++. +-.||++..+.+++++++.||+++...+. ....|++
T Consensus 171 ~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~~~~a~~~llG~l 250 (416)
T KOG2765|consen 171 LANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSDLPASRPLLGNL 250 (416)
T ss_pred HHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccccccCCccchhHHHH
Confidence 9999999999999999999999999999999998 57899999999999999999999987632 2369999
Q ss_pred HHHHHHHHHHHHHHHHhHhhhcc-CCCCchhHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCcchhhhhccccchhhHH
Q 015064 264 LNFLSAIFFGIHMLRTERISRST-KKENFLPLLGYEICVVALLSTIWVLVGGWFDSSQDFDQSPWTWTMLWDWMVTFPWV 342 (414)
Q Consensus 264 lal~aa~~~al~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~ 342 (414)
+++++|+.||+|.++.||...+. +..|.-.+..+..+...++.+|..++........ .+.+ +.....
T Consensus 251 laL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~-F~lP-----------~~~q~~ 318 (416)
T KOG2765|consen 251 LALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEER-FELP-----------SSTQFS 318 (416)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCc-ccCC-----------CCceeE
Confidence 99999999999999999987766 3577666666666777777776665554332111 1111 111245
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCChhHHHHHhhhHHHHHHHHHHHHhcCCCchhhHHHHHHHHHhhhccc
Q 015064 343 PALYTGIFSTGICLWIEIAAMRDVSATETAIIYGLEPLWGAGFAWFLLGERWSTAGWIGAALVLDVQIFLP 413 (414)
Q Consensus 343 ~ll~lgv~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~~~lge~~s~~~~iG~~LIi~g~~l~~ 413 (414)
.++..+.++++++-.+|.+|+-.+++..+++-..++.+.+++.+.++-|..+++.+++|...|++|.+.++
T Consensus 319 ~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn 389 (416)
T KOG2765|consen 319 LVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVN 389 (416)
T ss_pred eeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhhee
Confidence 57788899999999999999999999999999999999999999999999999999999999999988764
No 19
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.66 E-value=7.7e-14 Score=135.87 Aligned_cols=248 Identities=17% Similarity=0.178 Sum_probs=200.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHhc---CcchhhhHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHhhHHHHHHHHHH-
Q 015064 152 HPASFCAVRFVMSAIPFLPFVFWAR---DDVKTRNAGIELGLWVSLGYFVEALGLLTSDAGRASFISLFTVIVVPLFDG- 227 (414)
Q Consensus 152 ~p~~~~~~R~~~a~l~ll~~~~~~~---~~~~~~~~~~~~gl~~~~~~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~- 227 (414)
.|..+++..+....+...+.....+ +++...+.++..+++..++..+.+.|++|+|...-.++....|+++++++.
T Consensus 31 ~~~~lt~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~~~l 110 (303)
T PF08449_consen 31 FPLFLTFVQFAFNALFSFILLSLFKFPKSRKIPLKKYAILSFLFFLASVLSNAALKYISYPTQIVFKSSKPIPVMILGVL 110 (303)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhccccCCCcChHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHhhhHHHHHHHHHHH
Confidence 3888999998888877776655443 234456677888999999999999999999999999999999999999998
Q ss_pred HhcccCchhHHHHHHHHHHhhhhhcccCCC-----------CchhhHHHHHHHHHHHHHHHHHhHhhhccCCCCchhHHH
Q 015064 228 MLGAIIPAHTWFGVLISALGVGMLECSGSP-----------PSVGDFLNFLSAIFFGIHMLRTERISRSTKKENFLPLLG 296 (414)
Q Consensus 228 ~l~er~~~~~~~gi~l~~~Gv~li~~~~~~-----------~~~G~llal~aa~~~al~~v~~~~~~~~~~~~~~~~~~~ 296 (414)
++|+|.++++++++++..+|+++....+.. ...|+++.+++.++.|...+..++..++++ .++...++
T Consensus 111 ~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~a~~~~~qe~~~~~~~-~~~~~~mf 189 (303)
T PF08449_consen 111 ILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLLDAFTGVYQEKLFKKYG-KSPWELMF 189 (303)
T ss_pred hcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhC-CcHHHHHH
Confidence 799999999999999999999998754321 123999999999999999999999988876 57788899
Q ss_pred HHHHHHHHHHHHHHHH--hccCCCCCCCCCCcchhhhhccccchhhHHHHHHHHHHHHHHHHHHHHHHhccCChhHHHHH
Q 015064 297 YEICVVALLSTIWVLV--GGWFDSSQDFDQSPWTWTMLWDWMVTFPWVPALYTGIFSTGICLWIEIAAMRDVSATETAII 374 (414)
Q Consensus 297 ~~~~~~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ll~lgv~~~~~~~~l~~~al~~~~a~~~s~~ 374 (414)
+....+.+...+.... .+...+.. .. -..+|..+..++...+ +..+++......+++.++...+++
T Consensus 190 y~n~~~~~~~~~~~~~l~~~~~~~~~-----~f------~~~~p~~~~~l~~~s~-~~~~g~~~i~~~~~~~~al~~t~v 257 (303)
T PF08449_consen 190 YTNLFSLPFLLILLFLLPTGEFRSAI-----RF------ISAHPSVLLYLLLFSL-TGALGQFFIFYLIKKFSALTTTIV 257 (303)
T ss_pred HHHHHHHHHHHHHHHHHHhhHhhHHH-----HH------HHHhHHHHHHHHHHHH-HHHHHHHHHHHHHHhcCchhhhhH
Confidence 9999888887776666 22211100 00 0112333455555454 456677777888999999999999
Q ss_pred hhhHHHHHHHHHHHHhcCCCchhhHHHHHHHHHhhhcc
Q 015064 375 YGLEPLWGAGFAWFLLGERWSTAGWIGAALVLDVQIFL 412 (414)
Q Consensus 375 ~~l~pv~a~l~~~~~lge~~s~~~~iG~~LIi~g~~l~ 412 (414)
..+.-+++++++++++|+++++.+|+|.++++.|+.+.
T Consensus 258 ~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~ 295 (303)
T PF08449_consen 258 TTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLY 295 (303)
T ss_pred HHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHH
Confidence 99999999999999999999999999999999998764
No 20
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.51 E-value=1.6e-13 Score=112.30 Aligned_cols=129 Identities=18% Similarity=0.203 Sum_probs=116.1
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHhcC-------cchhhhHHHHHHHHHHHHHH
Q 015064 125 RSIFLLNVITIVYASDIPILKAAEEIMHPASFCAVRFVMSAIPFLPFVFWARD-------DVKTRNAGIELGLWVSLGYF 197 (414)
Q Consensus 125 ~g~l~~lla~~~wg~~~~~~k~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~-------~~~~~~~~~~~gl~~~~~~~ 197 (414)
...++.++++++++...++.|...++++|...+++|..+..++++.++...++ ..|.+....+.|+....++.
T Consensus 3 ~~~~~ALLsA~fa~L~~iF~KIGl~~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl 82 (140)
T COG2510 3 AAIIYALLSALFAGLTPIFAKIGLEGVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWL 82 (140)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhccccCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHH
Confidence 35789999999999999999999999999999999999999998888776533 24455566677999999999
Q ss_pred HHHHHHhhcchhHHHHHHhhHHHHHHHHHH-HhcccCchhHHHHHHHHHHhhhhhcc
Q 015064 198 VEALGLLTSDAGRASFISLFTVIVVPLFDG-MLGAIIPAHTWFGVLISALGVGMLEC 253 (414)
Q Consensus 198 ~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~-~l~er~~~~~~~gi~l~~~Gv~li~~ 253 (414)
+||+|++...++..+.+..++|+++.++++ ++|||++..+++|+++..+|++++..
T Consensus 83 ~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~ 139 (140)
T COG2510 83 LYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL 139 (140)
T ss_pred HHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence 999999999999999999999999999999 79999999999999999999988753
No 21
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.46 E-value=9.1e-13 Score=107.97 Aligned_cols=136 Identities=18% Similarity=0.276 Sum_probs=112.9
Q ss_pred hhHHHHHHHHHHHHHHHHHhHhhhccCCCCchhHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCcchhhhhccccchhh
Q 015064 261 GDFLNFLSAIFFGIHMLRTERISRSTKKENFLPLLGYEICVVALLSTIWVLVGGWFDSSQDFDQSPWTWTMLWDWMVTFP 340 (414)
Q Consensus 261 G~llal~aa~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~ 340 (414)
-.++++++|+++++..++.|--.++ .||...++.+.++..+.+..+....+......+.+ ++.
T Consensus 4 ~~~~ALLsA~fa~L~~iF~KIGl~~---vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~--------------~k~ 66 (140)
T COG2510 4 AIIYALLSALFAGLTPIFAKIGLEG---VDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIG--------------PKS 66 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccc---cCccHHHHHHHHHHHHHHHHHHHhcCceecccccC--------------cce
Confidence 3578999999999999999987765 66777788888887777777766666443333222 344
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCChhHHHHHhhhHHHHHHHHHHHHhcCCCchhhHHHHHHHHHhhhcccC
Q 015064 341 WVPALYTGIFSTGICLWIEIAAMRDVSATETAIIYGLEPLWGAGFAWFLLGERWSTAGWIGAALVLDVQIFLPR 414 (414)
Q Consensus 341 ~~~ll~lgv~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~~~lge~~s~~~~iG~~LIi~g~~l~~r 414 (414)
|..++..| +.++++..+|++|++..+++++.++.-++|+++++++++++||+++..+++|+.+|+.|.++.+|
T Consensus 67 ~lflilSG-la~glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~ 139 (140)
T COG2510 67 WLFLILSG-LAGGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL 139 (140)
T ss_pred ehhhhHHH-HHHHHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence 66666656 67899999999999999999999999999999999999999999999999999999999998765
No 22
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.34 E-value=2.4e-10 Score=107.52 Aligned_cols=211 Identities=15% Similarity=0.144 Sum_probs=154.5
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHhhHHHHHHHHHH-HhcccCchhHHHHHHHHHHhhhhhcccCC--
Q 015064 180 KTRNAGIELGLWVSLGYFVEALGLLTSDAGRASFISLFTVIVVPLFDG-MLGAIIPAHTWFGVLISALGVGMLECSGS-- 256 (414)
Q Consensus 180 ~~~~~~~~~gl~~~~~~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~-~l~er~~~~~~~gi~l~~~Gv~li~~~~~-- 256 (414)
++..+..+-+++..+.+.+.++++++++++.-.++..+..+++++++. ++|+|++++||+++++.++|+.++..++.
T Consensus 15 ~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~ 94 (244)
T PF04142_consen 15 KDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS 94 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence 334445556788889999999999999999999999999999999998 79999999999999999999999874311
Q ss_pred ----------------CCchhhHHHHHHHHHHHHHHHHHhHhhhccCCCCchhHHHHHHHHHHHHHHHHHHHhccCCCCC
Q 015064 257 ----------------PPSVGDFLNFLSAIFFGIHMLRTERISRSTKKENFLPLLGYEICVVALLSTIWVLVGGWFDSSQ 320 (414)
Q Consensus 257 ----------------~~~~G~llal~aa~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 320 (414)
....|.++.+.++++-++..++.++..|+.+ .+...-.....+.+.+..++...... ..+..
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~-~s~~~~N~qL~~~gi~~~~~~~~~~~-~~~~~ 172 (244)
T PF04142_consen 95 SDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSN-VSLWIQNMQLYLFGILFNLLALLLSD-GSAIS 172 (244)
T ss_pred cccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccc-hhHHHHHHHHHHHHHHHHHHHHhccc-ccccc
Confidence 1248899999999999999999999988755 44444444444444444444433322 11111
Q ss_pred CCCCCcchhhhhccccchhhHHHHHHHHHHHHHHHHHHHHHHhccCChhHHHHHhhhHHHHHHHHHHHHhcCCCchhhHH
Q 015064 321 DFDQSPWTWTMLWDWMVTFPWVPALYTGIFSTGICLWIEIAAMRDVSATETAIIYGLEPLWGAGFAWFLLGERWSTAGWI 400 (414)
Q Consensus 321 ~~~~~~~~~~~~~~w~~~~~~~~ll~lgv~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~~~lge~~s~~~~i 400 (414)
+.. - ++..++..|..+. ...++=++....+|+.+.-.=+....+..+++.++++++||.+++....+
T Consensus 173 ~~g--~------f~G~~~~~~~~i~-----~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~l 239 (244)
T PF04142_consen 173 ESG--F------FHGYSWWVWIVIF-----LQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLL 239 (244)
T ss_pred cCC--c------hhhcchHHHHHHH-----HHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhh
Confidence 111 0 1111111233222 33333345566789999999999999999999999999999999999999
Q ss_pred HHHHH
Q 015064 401 GAALV 405 (414)
Q Consensus 401 G~~LI 405 (414)
|..++
T Consensus 240 g~~~V 244 (244)
T PF04142_consen 240 GAALV 244 (244)
T ss_pred heecC
Confidence 98764
No 23
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.33 E-value=8.4e-12 Score=104.28 Aligned_cols=125 Identities=20% Similarity=0.352 Sum_probs=103.9
Q ss_pred HHHHHHHHHHhHhhhccCCCCchhHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCcchhhhhccccchhhHHHHHHHHH
Q 015064 270 IFFGIHMLRTERISRSTKKENFLPLLGYEICVVALLSTIWVLVGGWFDSSQDFDQSPWTWTMLWDWMVTFPWVPALYTGI 349 (414)
Q Consensus 270 ~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ll~lgv 349 (414)
++||.+.+..|+..++ .|+....++++..+++ .++......... .... +++.+...++.++
T Consensus 1 ~~~a~~~~~~k~~~~~---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~--------------~~~~~~~~~~~~~ 61 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLKK---ISPLSITFWRFLIAGI-LLILLLILGRKP-FKNL--------------SPRQWLWLLFLGL 61 (126)
T ss_pred ceeeeHHHHHHHHhcc---CCHHHHHHHHHHHHHH-HHHHHHhhcccc-ccCC--------------ChhhhhhhhHhhc
Confidence 4689999999999887 5678999999999987 555555544322 1111 1233677888899
Q ss_pred HHHHHHHHHHHHHhccCChhHHHHHhhhHHHHHHHHHHHHhcCCCchhhHHHHHHHHHhhhccc
Q 015064 350 FSTGICLWIEIAAMRDVSATETAIIYGLEPLWGAGFAWFLLGERWSTAGWIGAALVLDVQIFLP 413 (414)
Q Consensus 350 ~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~~~lge~~s~~~~iG~~LIi~g~~l~~ 413 (414)
+++.+++.++++++++.+++.++++.+++|+++.++++++++|++++.+++|+.++++|+++.+
T Consensus 62 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 62 LGTALAYLLYFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred cceehHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 8889999999999999999999999999999999999999999999999999999999998753
No 24
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=99.30 E-value=1.2e-11 Score=119.31 Aligned_cols=263 Identities=14% Similarity=0.138 Sum_probs=203.5
Q ss_pred hHHHHHHhhh--cC-CHHHHHHHHHHHHHHHHHHHHHHhcCc------chhhhHHHHHHHHHHHHHHHHHHHHhhcchhH
Q 015064 140 DIPILKAAEE--IM-HPASFCAVRFVMSAIPFLPFVFWARDD------VKTRNAGIELGLWVSLGYFVEALGLLTSDAGR 210 (414)
Q Consensus 140 ~~~~~k~~~~--~~-~p~~~~~~R~~~a~l~ll~~~~~~~~~------~~~~~~~~~~gl~~~~~~~~~~~al~~~~~~~ 210 (414)
.....|.+.+ +. -|..++..+...+.+..+.....+-.+ +..++..+.+|+...++..+-+.|+++.+++.
T Consensus 32 ~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~~~~~v~~n~Sl~~v~VsF 111 (316)
T KOG1441|consen 32 VIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVFCISHVLGNVSLSYVPVSF 111 (316)
T ss_pred eEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHHHHHHHhcchhhhccchhH
Confidence 3345677777 43 377888887777777766555443222 13455677789999999999999999999999
Q ss_pred HHHHHhhHHHHHHHHHH-HhcccCchhHHHHHHHHHHhhhhhcccCCCC-chhhHHHHHHHHHHHHHHHHHhHhhh-ccC
Q 015064 211 ASFISLFTVIVVPLFDG-MLGAIIPAHTWFGVLISALGVGMLECSGSPP-SVGDFLNFLSAIFFGIHMLRTERISR-STK 287 (414)
Q Consensus 211 a~~l~~~~Pl~~~ll~~-~l~er~~~~~~~gi~l~~~Gv~li~~~~~~~-~~G~llal~aa~~~al~~v~~~~~~~-~~~ 287 (414)
...+-.+.|.++.++++ +.+|+.+...++.++....||.+....+..+ ..|...++++.+..+...++.++..+ +..
T Consensus 112 ~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~ 191 (316)
T KOG1441|consen 112 YQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTELSFNLFGFISAMISNLAFALRNILSKKLLTSKGE 191 (316)
T ss_pred HHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccccccHHHHHHHHHHHHHHHHHHHHHHHhhhcccc
Confidence 99999999999999999 6899999999999999999999988876644 69999999999999999999999874 223
Q ss_pred CCCchhHHHHHHHHHHHHHH-HHHHHhccCCCCCCCCCCcchhhhhccccchhhHHHHHHHHHHHHHHHHHHHHHHhccC
Q 015064 288 KENFLPLLGYEICVVALLST-IWVLVGGWFDSSQDFDQSPWTWTMLWDWMVTFPWVPALYTGIFSTGICLWIEIAAMRDV 366 (414)
Q Consensus 288 ~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ll~lgv~~~~~~~~l~~~al~~~ 366 (414)
..|+..+..++.-.+.+.++ |+....++... .......|.+. ...++... ++...-....+..+.++
T Consensus 192 ~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~-~~~~~~~~~~~----------~~~~~~~s-v~~f~~Nls~f~~ig~t 259 (316)
T KOG1441|consen 192 SLNSMNLLYYTAPISLIFLLIPFLDYVEGNKF-VGFLTAPWFVT----------FLILLLNS-VLAFLLNLSAFLVIGRT 259 (316)
T ss_pred ccCchHHHHHhhhHHHHHHhcchHhhhcccce-eeeeccccchh----------hHHHHHHH-HHHHHHHHHHHHHHccc
Confidence 48889999998888888888 66555543222 10011122211 22233333 33344455677889999
Q ss_pred ChhHHHHHhhhHHHHHHHHHHHHhcCCCchhhHHHHHHHHHhhhcccC
Q 015064 367 SATETAIIYGLEPLWGAGFAWFLLGERWSTAGWIGAALVLDVQIFLPR 414 (414)
Q Consensus 367 ~a~~~s~~~~l~pv~a~l~~~~~lge~~s~~~~iG~~LIi~g~~l~~r 414 (414)
+|...++...+.-++.++.++++|+++.++.+..|.++-+.|+++.+|
T Consensus 260 SalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~ 307 (316)
T KOG1441|consen 260 SALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSR 307 (316)
T ss_pred CchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999987654
No 25
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.29 E-value=3e-11 Score=100.86 Aligned_cols=117 Identities=18% Similarity=0.248 Sum_probs=97.7
Q ss_pred HHHhhhHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHhc-C-----cchhhhHHHHHHHH-HHHHHHHHHHHHhhcc
Q 015064 135 IVYASDIPILKAAEEIMHPASFCAVRFVMSAIPFLPFVFWAR-D-----DVKTRNAGIELGLW-VSLGYFVEALGLLTSD 207 (414)
Q Consensus 135 ~~wg~~~~~~k~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~-~-----~~~~~~~~~~~gl~-~~~~~~~~~~al~~~~ 207 (414)
++||...++.|...++.||.+..++|+..+.+ ++++....+ + +.+.+......|+. ...++.++++++++++
T Consensus 1 ~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 79 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLKKISPLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYIS 79 (126)
T ss_pred ceeeeHHHHHHHHhccCCHHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhcc
Confidence 46999999999999999999999999999997 444433322 1 12233445555666 5788999999999999
Q ss_pred hhHHHHHHhhHHHHHHHHHH-HhcccCchhHHHHHHHHHHhhhhhc
Q 015064 208 AGRASFISLFTVIVVPLFDG-MLGAIIPAHTWFGVLISALGVGMLE 252 (414)
Q Consensus 208 ~~~a~~l~~~~Pl~~~ll~~-~l~er~~~~~~~gi~l~~~Gv~li~ 252 (414)
++.++.+..+.|+++.++++ ++||++++.+++|+++++.|++++.
T Consensus 80 ~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 80 ASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998 7999999999999999999999875
No 26
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.20 E-value=2.3e-10 Score=103.32 Aligned_cols=244 Identities=12% Similarity=0.095 Sum_probs=185.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCc---chhhhHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHhhHHHHHHHHHH-Hh
Q 015064 154 ASFCAVRFVMSAIPFLPFVFWARDD---VKTRNAGIELGLWVSLGYFVEALGLLTSDAGRASFISLFTVIVVPLFDG-ML 229 (414)
Q Consensus 154 ~~~~~~R~~~a~l~ll~~~~~~~~~---~~~~~~~~~~gl~~~~~~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~-~l 229 (414)
..++|+....-.++.=+++..+++. ...-+.+...++...+++...+.|+++.|--...+--+.-|+=+++++. +.
T Consensus 54 laLVf~qC~~N~vfAkvl~~ir~~~~~D~t~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~ 133 (337)
T KOG1580|consen 54 LALVFFQCTANTVFAKVLFLIRKKTEIDNTPTKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFA 133 (337)
T ss_pred HHHHHHHHHHHHHHHHhheeecccccccCCcchHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhh
Confidence 3445555555544443333333222 2223344555666677888889999999999999999999999999998 78
Q ss_pred cccCchhHHHHHHHHHHhhhhhcccC--------CCCchhhHHHHHHHHHHHHHHHHHhHhhhccCCCCchhHHHHHHHH
Q 015064 230 GAIIPAHTWFGVLISALGVGMLECSG--------SPPSVGDFLNFLSAIFFGIHMLRTERISRSTKKENFLPLLGYEICV 301 (414)
Q Consensus 230 ~er~~~~~~~gi~l~~~Gv~li~~~~--------~~~~~G~llal~aa~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~~ 301 (414)
+++.++.+...++..++||.+....+ .....|.++.+++-..-++......|.++.+.+ ....++++..+.
T Consensus 134 ~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~-~g~~MM~~~Nlw 212 (337)
T KOG1580|consen 134 HKSYHWRKYCCVLMIVVGVALFMYKENKVGGAEDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQR-TGTSMMFYTNLW 212 (337)
T ss_pred cccccHHHHHHHHHHHHHHHHhhccccccCCCcccccchHHHHHHHHHHhcccchhHHHHHHHhhcc-CchhhHHHHHHH
Confidence 99999999999999999999988542 235799999999999999988888888877663 456777787877
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCCcchhhhhccccchhhHHHHHHHHHHHHHHHHHHHHHHhccCChhHHHHHhhhHHHH
Q 015064 302 VALLSTIWVLVGGWFDSSQDFDQSPWTWTMLWDWMVTFPWVPALYTGIFSTGICLWIEIAAMRDVSATETAIIYGLEPLW 381 (414)
Q Consensus 302 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ll~lgv~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~ 381 (414)
+.+.+..-.++.+...+.. .+.. -.|..|+-+..+++ ++.+++++.+.-+...+|..-+++..+.-.|
T Consensus 213 StL~Lg~g~lfTGElweF~-----yF~~------RhP~~~~~l~l~ai-~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfF 280 (337)
T KOG1580|consen 213 STLYLGAGLLFTGELWEFF-----YFVQ------RHPYVFWDLTLLAI-ASCLGQWFIFKTVEEFGPLTCSIVTTTRKFF 280 (337)
T ss_pred HHHHhhhhheehhhHHHHH-----HHHH------hccHHHHHHHHHHH-HHHhhhHHHHHHHHHhCCeeEEEEeehHHHH
Confidence 7777665554444221111 1111 12455777777777 5688999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCchhhHHHHHHHHHhhh
Q 015064 382 GAGFAWFLLGERWSTAGWIGAALVLDVQI 410 (414)
Q Consensus 382 a~l~~~~~lge~~s~~~~iG~~LIi~g~~ 410 (414)
+++.+.++++++++..||+|..+++.+..
T Consensus 281 Til~SVllf~npls~rQwlgtvlVF~aL~ 309 (337)
T KOG1580|consen 281 TILISVLLFNNPLSGRQWLGTVLVFSALT 309 (337)
T ss_pred HHHHHHHHhcCcCcHHHHHHHHHHHHHhh
Confidence 99999999999999999999999998764
No 27
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=99.18 E-value=6e-08 Score=93.47 Aligned_cols=273 Identities=12% Similarity=0.104 Sum_probs=190.7
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHhhh-c---CCHHHHHHHHHHHHHHHHHHHHHHhcCc-----ch-----------hhhH
Q 015064 125 RSIFLLNVITIVYASDIPILKAAEE-I---MHPASFCAVRFVMSAIPFLPFVFWARDD-----VK-----------TRNA 184 (414)
Q Consensus 125 ~g~l~~lla~~~wg~~~~~~k~~~~-~---~~p~~~~~~R~~~a~l~ll~~~~~~~~~-----~~-----------~~~~ 184 (414)
.-.+.+++..+.++...+..|+... + +.|...++.--.+-.++...+++++.+. .+ ...+
T Consensus 15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk 94 (345)
T KOG2234|consen 15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK 94 (345)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence 3456677778888888888888764 2 6688888877777777666666554211 00 1112
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcchhHHHHHHhhHHHHHHHHHH-HhcccCchhHHHHHHHHHHhhhhhccc---CC----
Q 015064 185 GIELGLWVSLGYFVEALGLLTSDAGRASFISLFTVIVVPLFDG-MLGAIIPAHTWFGVLISALGVGMLECS---GS---- 256 (414)
Q Consensus 185 ~~~~gl~~~~~~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~-~l~er~~~~~~~gi~l~~~Gv~li~~~---~~---- 256 (414)
..+-+++..+.+-++|.++.+.+++...+...+-.+.++++.. ++++|+++++|.++++.+.|+.++-.+ +.
T Consensus 95 ~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a~~ 174 (345)
T KOG2234|consen 95 VSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGAKS 174 (345)
T ss_pred HHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCccC
Confidence 2333556667777999999999999999999999999999998 799999999999999999999999832 11
Q ss_pred -----CCchhhHHHHHHHHHHHHHHHHHhHhhhccCCCCchhHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCcchhhh
Q 015064 257 -----PPSVGDFLNFLSAIFFGIHMLRTERISRSTKKENFLPLLGYEICVVALLSTIWVLVGGWFDSSQDFDQSPWTWTM 331 (414)
Q Consensus 257 -----~~~~G~llal~aa~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (414)
....|....+.++..-+...++.++..++.+ .+...-..-....+.+..+...... ..+... |.+
T Consensus 175 ~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~-~s~wi~NiqL~~~g~~f~~l~~~~~-d~~~i~--------~~g 244 (345)
T KOG2234|consen 175 ESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSN-VSLWIRNIQLYFFGILFNLLTILLQ-DGEAIN--------EYG 244 (345)
T ss_pred CCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCC-chHHHHHHHHHHHHHHHHHHHHhhc-cccccc--------cCC
Confidence 1358899999999999999999999987644 2322222222233333333222222 111111 223
Q ss_pred hccccchhhHHHHHHHHHHHHHHHHHHHHHHhccCChhHHHHHhhhHHHHHHHHHHHHhcCCCchhhHHHHHHHHHhhhc
Q 015064 332 LWDWMVTFPWVPALYTGIFSTGICLWIEIAAMRDVSATETAIIYGLEPLWGAGFAWFLLGERWSTAGWIGAALVLDVQIF 411 (414)
Q Consensus 332 ~~~w~~~~~~~~ll~lgv~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~~~lge~~s~~~~iG~~LIi~g~~l 411 (414)
.+...+...|...+..++.+-.+ ..-+|+.+--.=+....+..+++.+.++.++|-.||....+|..+++.++.+
T Consensus 245 ff~G~s~~vw~vVl~~a~gGLlv-----s~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~l 319 (345)
T KOG2234|consen 245 FFYGYSSIVWLVVLLNAVGGLLV-----SLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFL 319 (345)
T ss_pred ccccccHHHHHHHHHHhccchhH-----HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHH
Confidence 33333333466555555544333 3457777777777788888999999999999999999999999999999876
Q ss_pred c
Q 015064 412 L 412 (414)
Q Consensus 412 ~ 412 (414)
-
T Consensus 320 Y 320 (345)
T KOG2234|consen 320 Y 320 (345)
T ss_pred h
Confidence 4
No 28
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.18 E-value=6.6e-09 Score=98.65 Aligned_cols=272 Identities=14% Similarity=0.084 Sum_probs=207.0
Q ss_pred HHHHHHHHhhhHHHHHHhhhcCC-HHHHH--HHHHHHHHHHHHHHHHHh-----cCcchhhhHHHHHHHHHHHHHHHHHH
Q 015064 130 LNVITIVYASDIPILKAAEEIMH-PASFC--AVRFVMSAIPFLPFVFWA-----RDDVKTRNAGIELGLWVSLGYFVEAL 201 (414)
Q Consensus 130 ~lla~~~wg~~~~~~k~~~~~~~-p~~~~--~~R~~~a~l~ll~~~~~~-----~~~~~~~~~~~~~gl~~~~~~~~~~~ 201 (414)
.+.-++.=-.+.+..|.+....+ |..+. ..+.+...+.+...-+.+ .-+++..|+++...++..+....-..
T Consensus 17 a~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf~~~i~t~~~ 96 (314)
T KOG1444|consen 17 ALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLFVGMLFTGSK 96 (314)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHHHHHHHHccc
Confidence 33333333445567788876533 33333 366666655554433222 12355667788888888888888889
Q ss_pred HHhhcchhHHHHHHhhHHHHHHHHHH-HhcccCchhHHHHHHHHHHhhhhhcccCCCCc-hhhHHHHHHHHHHHHHHHHH
Q 015064 202 GLLTSDAGRASFISLFTVIVVPLFDG-MLGAIIPAHTWFGVLISALGVGMLECSGSPPS-VGDFLNFLSAIFFGIHMLRT 279 (414)
Q Consensus 202 al~~~~~~~a~~l~~~~Pl~~~ll~~-~l~er~~~~~~~gi~l~~~Gv~li~~~~~~~~-~G~llal~aa~~~al~~v~~ 279 (414)
+++|++....+++-...|+++++... ++|.|++...+.+++...+|......++..+. .|+.+++...+.-+.+.+..
T Consensus 97 slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf~~~gY~w~~~n~~~~a~~~v~~ 176 (314)
T KOG1444|consen 97 SLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSFNLRGYSWALANCLTTAAFVVYV 176 (314)
T ss_pred cccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccceecchhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998 79999999999999999999999888876654 58999999999999999999
Q ss_pred hHhhhccCCCCchhHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCcchhhhhccccchhhHHHHHHHHHHHHHHHHHHH
Q 015064 280 ERISRSTKKENFLPLLGYEICVVALLSTIWVLVGGWFDSSQDFDQSPWTWTMLWDWMVTFPWVPALYTGIFSTGICLWIE 359 (414)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ll~lgv~~~~~~~~l~ 359 (414)
|+..+..+ .+...+++|..+.....+.....+.+..+.... . .-+|..+..|..++..++++.++.| +-
T Consensus 177 kk~vd~~~-l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~-~--------~~~~~~~~~~~~~~lScv~gf~isy-~s 245 (314)
T KOG1444|consen 177 KKSVDSAN-LNKFGLVFYNNLLSLPPLLILSFITGELDALSL-N--------FDNWSDSSVLVVMLLSCVMGFGISY-TS 245 (314)
T ss_pred HHhhcccc-ccceeEEeehhHHHHHHHHHHHHHhcchHHHHh-h--------cccccchhHHHHHHHHHHHHHHHHH-HH
Confidence 99876544 566778888888888887777766654321110 0 0135566778889999999888888 66
Q ss_pred HHHhccCChhHHHHHhhhHHHHHHHHHHHHhcCCCchhhHHHHHHHHHhhhcc
Q 015064 360 IAAMRDVSATETAIIYGLEPLWGAGFAWFLLGERWSTAGWIGAALVLDVQIFL 412 (414)
Q Consensus 360 ~~al~~~~a~~~s~~~~l~pv~a~l~~~~~lge~~s~~~~iG~~LIi~g~~l~ 412 (414)
....+..+++..+++....-....+.+.+++|++.++..++|..+=+.|.++.
T Consensus 246 ~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y 298 (314)
T KOG1444|consen 246 FLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLY 298 (314)
T ss_pred HHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHH
Confidence 78889999999999997777778888888888899999999999888776653
No 29
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=99.10 E-value=1.3e-08 Score=94.35 Aligned_cols=272 Identities=17% Similarity=0.171 Sum_probs=187.9
Q ss_pred HhhhHHHHHHhhh----c----CCHHHHHHHHHHHHHHHHHHHHHHhcCc-----------------chhh-hHHHHHHH
Q 015064 137 YASDIPILKAAEE----I----MHPASFCAVRFVMSAIPFLPFVFWARDD-----------------VKTR-NAGIELGL 190 (414)
Q Consensus 137 wg~~~~~~k~~~~----~----~~p~~~~~~R~~~a~l~ll~~~~~~~~~-----------------~~~~-~~~~~~gl 190 (414)
=+.+.+..|++-+ + -+|+.....-++.-++.+..+...+++. .+.. ...+.-++
T Consensus 15 Gs~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p~lfl~Pal 94 (372)
T KOG3912|consen 15 GSFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNPVLFLPPAL 94 (372)
T ss_pred ccHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCcceecChHH
Confidence 3455667776643 2 3466666666666656666555544211 0111 11223477
Q ss_pred HHHHHHHHHHHHHhhcchhHHHHHHhhHHHHHHHHHH-HhcccCchhHHHHHHHHHHhhhhhcccC-----------CCC
Q 015064 191 WVSLGYFVEALGLLTSDAGRASFISLFTVIVVPLFDG-MLGAIIPAHTWFGVLISALGVGMLECSG-----------SPP 258 (414)
Q Consensus 191 ~~~~~~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~-~l~er~~~~~~~gi~l~~~Gv~li~~~~-----------~~~ 258 (414)
+-..+..+.|.++.+++++.-.++.....+|+.+++. +++++++.++|+|+....+|++++...+ +..
T Consensus 95 ~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p~~d~s~i 174 (372)
T KOG3912|consen 95 CDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDPYTDYSSI 174 (372)
T ss_pred HHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCCccccccc
Confidence 7888889999999999999999999999999999998 8999999999999999999999987432 123
Q ss_pred chhhHHHHHHHHHHHHHHHHHhHhhhccCCCCchhHHHHHHHHHHHHHHHHHHHhccCC---CCCCCCCC-cchhhhhcc
Q 015064 259 SVGDFLNFLSAIFFGIHMLRTERISRSTKKENFLPLLGYEICVVALLSTIWVLVGGWFD---SSQDFDQS-PWTWTMLWD 334 (414)
Q Consensus 259 ~~G~llal~aa~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~ 334 (414)
..|+++.+++-+.-|+.++.-+|..++.+ ++|.....|+.+.+.++....+....-.. .....+.. -.+|...|.
T Consensus 175 itGdllIiiaqiivaiQ~v~Eek~l~~~n-V~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD~~~~~~ 253 (372)
T KOG3912|consen 175 ITGDLLIIIAQIIVAIQMVCEEKQLKKSN-VAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLEDWGDAFA 253 (372)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHhhhhhcc-CCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhhHHHHHH
Confidence 68999999999999999999999998876 89999999999998666544433322111 11111111 112222111
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHH----HHhccCChhHHHHHhhhHHHHHHHHHHHHhcCCCchhhHHHHHHHHHhhh
Q 015064 335 WMVTFPWVPALYTGIFSTGICLWIEI----AAMRDVSATETAIIYGLEPLWGAGFAWFLLGERWSTAGWIGAALVLDVQI 410 (414)
Q Consensus 335 w~~~~~~~~ll~lgv~~~~~~~~l~~----~al~~~~a~~~s~~~~l~pv~a~l~~~~~lge~~s~~~~iG~~LIi~g~~ 410 (414)
-..... .+++.+.+..++..+++ .-.|..+++.-.++..+...+--+++.....|.+...|+.|.++.+.|++
T Consensus 254 ~~~e~p---~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFliLi~Gi~ 330 (372)
T KOG3912|consen 254 ALQESP---SLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLILIMGII 330 (372)
T ss_pred HhcCCc---hhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111111 22333333333332222 33567788888899999998888899999999999999999999999987
Q ss_pred cc
Q 015064 411 FL 412 (414)
Q Consensus 411 l~ 412 (414)
+.
T Consensus 331 lY 332 (372)
T KOG3912|consen 331 LY 332 (372)
T ss_pred HH
Confidence 64
No 30
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=99.09 E-value=1.4e-09 Score=90.21 Aligned_cols=98 Identities=18% Similarity=0.220 Sum_probs=80.6
Q ss_pred HHHHHHHHHHHHHHHHHhcCcc--------hhhhHHHHHHHHHH-HHHHHHHHHHhhcchhHHHHHHhhHHHHHHHHHH-
Q 015064 158 AVRFVMSAIPFLPFVFWARDDV--------KTRNAGIELGLWVS-LGYFVEALGLLTSDAGRASFISLFTVIVVPLFDG- 227 (414)
Q Consensus 158 ~~R~~~a~l~ll~~~~~~~~~~--------~~~~~~~~~gl~~~-~~~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~- 227 (414)
.+|+..+.+++..+...+++.+ +.+.+.+..|++.. .++.++++|+++.+ +.++.+.++.|+++.+++.
T Consensus 2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~ 80 (113)
T PF13536_consen 2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL 80 (113)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence 5799999998888777654321 12233445577665 88999999999999 5888999999999999998
Q ss_pred HhcccCchhHHHHHHHHHHhhhhhcccCC
Q 015064 228 MLGAIIPAHTWFGVLISALGVGMLECSGS 256 (414)
Q Consensus 228 ~l~er~~~~~~~gi~l~~~Gv~li~~~~~ 256 (414)
++|||++++++++++++++|++++..++.
T Consensus 81 ~~~er~~~~~~~a~~l~~~Gv~li~~~~~ 109 (113)
T PF13536_consen 81 FFKERLSPRRWLAILLILIGVILIAWSDL 109 (113)
T ss_pred HhcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence 79999999999999999999999987654
No 31
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=99.06 E-value=8.3e-11 Score=107.36 Aligned_cols=239 Identities=17% Similarity=0.201 Sum_probs=187.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcCcch-hhhHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHhhHHHHHHHHHH-Hh
Q 015064 152 HPASFCAVRFVMSAIPFLPFVFWARDDVK-TRNAGIELGLWVSLGYFVEALGLLTSDAGRASFISLFTVIVVPLFDG-ML 229 (414)
Q Consensus 152 ~p~~~~~~R~~~a~l~ll~~~~~~~~~~~-~~~~~~~~gl~~~~~~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~-~l 229 (414)
.|....|..+..-+++-.+++..|++..+ .++.++++++.-.-++++...|.||++...+.++..-....+.+++| ++
T Consensus 47 ~Pt~QtFl~Y~LLalVY~~~~~fR~~~~~~~~~hYilla~~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fL 126 (336)
T KOG2766|consen 47 APTSQTFLNYVLLALVYGPIMLFRRKYIKAKWRHYILLAFVDVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFL 126 (336)
T ss_pred CccHHHHHHHHHHHHHHhhHHHhhhHHHHHHHHHhhheeEEeecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHH
Confidence 58888999999888888888888876543 44557777888888888889999999999999999888888899998 79
Q ss_pred cccCchhHHHHHHHHHHhhhhhcccC---------CCCchhhHHHHHHHHHHHHHHHHHhHhhhccCCCCchhHHHHHHH
Q 015064 230 GAIIPAHTWFGVLISALGVGMLECSG---------SPPSVGDFLNFLSAIFFGIHMLRTERISRSTKKENFLPLLGYEIC 300 (414)
Q Consensus 230 ~er~~~~~~~gi~l~~~Gv~li~~~~---------~~~~~G~llal~aa~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~ 300 (414)
|.|....++.|++++..||++++..+ ..+..|+++.+++|-+||+..+.-..+.++ .|...++....+
T Consensus 127 ktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lvi~GATlYaVSNv~EEflvkn---~d~~elm~~lgL 203 (336)
T KOG2766|consen 127 KTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVIAGATLYAVSNVSEEFLVKN---ADRVELMGFLGL 203 (336)
T ss_pred HHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEEEecceeeeeccccHHHHHhc---CcHHHHHHHHHH
Confidence 99999999999999999999998542 345799999999999999999999999887 455677776677
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCCcchhhhhccccchhhHHHHHHH-HHHHHHHHHHHHHHHhccCChhHHHHHhhhHH
Q 015064 301 VVALLSTIWVLVGGWFDSSQDFDQSPWTWTMLWDWMVTFPWVPALYT-GIFSTGICLWIEIAAMRDVSATETAIIYGLEP 379 (414)
Q Consensus 301 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ll~l-gv~~~~~~~~l~~~al~~~~a~~~s~~~~l~p 379 (414)
.++++...-..... .+ .....|+|. ...++ ..++..+-|.+..-.+|..+++....-..+.-
T Consensus 204 fGaIIsaIQ~i~~~--~~---~~tl~w~~~------------i~~yl~f~L~MFllYsl~pil~k~~~aT~~nlslLTsD 266 (336)
T KOG2766|consen 204 FGAIISAIQFIFER--HH---VSTLHWDSA------------IFLYLRFALTMFLLYSLAPILIKTNSATMFNLSLLTSD 266 (336)
T ss_pred HHHHHHHHHHhhhc--cc---eeeEeehHH------------HHHHHHHHHHHHHHHHhhHHheecCCceEEEhhHhHHH
Confidence 77777665432221 11 112233322 22233 33455556667777788889998888888888
Q ss_pred HHHHHHHHHHhcCCCchhhHHHHHHHHHhhhcc
Q 015064 380 LWGAGFAWFLLGERWSTAGWIGAALVLDVQIFL 412 (414)
Q Consensus 380 v~a~l~~~~~lge~~s~~~~iG~~LIi~g~~l~ 412 (414)
.+++++ ..||-..+|...+..+.+..|.++.
T Consensus 267 mwsl~i--~~FgYhv~wLY~laF~~i~~GliiY 297 (336)
T KOG2766|consen 267 MWSLLI--RTFGYHVDWLYFLAFATIATGLIIY 297 (336)
T ss_pred HHHHHH--HHHhcchhhhhHHHHHHHHHhhEEe
Confidence 899888 6788889999999999999998764
No 32
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.04 E-value=8.7e-09 Score=97.67 Aligned_cols=127 Identities=23% Similarity=0.282 Sum_probs=104.2
Q ss_pred chHHHHHHHHHHHHHhhhHHHHHHhhhcCCHH--HHHHHHHHHHHHHHHHHHHHhcCcc----hhhhHHHHHHHH-HHHH
Q 015064 123 KIRSIFLLNVITIVYASDIPILKAAEEIMHPA--SFCAVRFVMSAIPFLPFVFWARDDV----KTRNAGIELGLW-VSLG 195 (414)
Q Consensus 123 ~~~g~l~~lla~~~wg~~~~~~k~~~~~~~p~--~~~~~R~~~a~l~ll~~~~~~~~~~----~~~~~~~~~gl~-~~~~ 195 (414)
..+|.+++++++++|+...+..|...++.++. ....+++.++.++++++....+++. +.+...+..++. ...+
T Consensus 126 ~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (260)
T TIGR00950 126 NPAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNPQALSLQWGALLYLGLIGTALA 205 (260)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHH
Confidence 35799999999999999999999998877754 4555789999988888776543322 122223445655 4688
Q ss_pred HHHHHHHHhhcchhHHHHHHhhHHHHHHHHHH-HhcccCchhHHHHHHHHHHhhh
Q 015064 196 YFVEALGLLTSDAGRASFISLFTVIVVPLFDG-MLGAIIPAHTWFGVLISALGVG 249 (414)
Q Consensus 196 ~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~-~l~er~~~~~~~gi~l~~~Gv~ 249 (414)
+.++++++++.+++.++.+.++.|+++.++++ ++||+++..+++|..+.+.|+.
T Consensus 206 ~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~~ 260 (260)
T TIGR00950 206 YFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAVL 260 (260)
T ss_pred HHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence 89999999999999999999999999999998 7999999999999999999873
No 33
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=98.99 E-value=6.1e-08 Score=91.17 Aligned_cols=247 Identities=12% Similarity=0.133 Sum_probs=192.5
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcCc---chhhhHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHhhHHHHHHHHHH-
Q 015064 152 HPASFCAVRFVMSAIPFLPFVFWARDD---VKTRNAGIELGLWVSLGYFVEALGLLTSDAGRASFISLFTVIVVPLFDG- 227 (414)
Q Consensus 152 ~p~~~~~~R~~~a~l~ll~~~~~~~~~---~~~~~~~~~~gl~~~~~~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~- 227 (414)
++..+.+..-+++.++-..++.+++.. .+.+..+...++.+..+..+-+-|++|++--.-.+--..--+-++++..
T Consensus 50 ~~~fL~~~q~l~~~~~s~~~l~~~k~~~~~~apl~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~L 129 (327)
T KOG1581|consen 50 HSLFLVFCQRLVALLVSYAMLKWWKKELSGVAPLYKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTL 129 (327)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhcccccCCCCCchhHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHH
Confidence 466777777777777765555444322 3455667778888999999999999999988777777777777888887
Q ss_pred HhcccCchhHHHHHHHHHHhhhhhcccCC----------CCchhhHHHHHHHHHHHHHHHHHhHhhhccCCCCchhHHHH
Q 015064 228 MLGAIIPAHTWFGVLISALGVGMLECSGS----------PPSVGDFLNFLSAIFFGIHMLRTERISRSTKKENFLPLLGY 297 (414)
Q Consensus 228 ~l~er~~~~~~~gi~l~~~Gv~li~~~~~----------~~~~G~llal~aa~~~al~~v~~~~~~~~~~~~~~~~~~~~ 297 (414)
+.|+|.+..+.+-.++.-+|+.+....+. ....|..+....-++=+.-.....++-++.. ++...++++
T Consensus 130 vy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k-~s~~~mM~~ 208 (327)
T KOG1581|consen 130 VYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENSPIGILLLFGYLLFDGFTNATQDSLFKKYK-VSSLHMMFG 208 (327)
T ss_pred HhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhccCC-ccHhHHHHH
Confidence 58999999999999999999998774321 1257888888888888888888888887655 788899999
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCCCCCCcchhhhhccccchhhHHHHHHHHHHHHHHHHHHHHHHhccCChhHHHHHhhh
Q 015064 298 EICVVALLSTIWVLVGGWFDSSQDFDQSPWTWTMLWDWMVTFPWVPALYTGIFSTGICLWIEIAAMRDVSATETAIIYGL 377 (414)
Q Consensus 298 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ll~lgv~~~~~~~~l~~~al~~~~a~~~s~~~~l 377 (414)
..+.+.+......+..+...+.. . +--.+|+.+.=++....+ +.+++.+.++-+++.|+-..+.+..+
T Consensus 209 vNLf~~i~~~~~li~qg~~~~av-----~------F~~~hp~~~~Di~l~s~~-gavGQ~FI~~TI~~FGslt~t~I~tt 276 (327)
T KOG1581|consen 209 VNLFSAILNGTYLILQGHLLPAV-----S------FIKEHPDVAFDILLYSTC-GAVGQLFIFYTIERFGSLTFTTIMTT 276 (327)
T ss_pred HHHHHHHHHHHhhhcCCCCchHH-----H------HHHcChhHHHHHHHHHHh-hhhhhheehhhHhhcccHHHHHHHHH
Confidence 88888888777644433222111 0 111235556667777775 46688899999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCchhhHHHHHHHHHhhhc
Q 015064 378 EPLWGAGFAWFLLGERWSTAGWIGAALVLDVQIF 411 (414)
Q Consensus 378 ~pv~a~l~~~~~lge~~s~~~~iG~~LIi~g~~l 411 (414)
.=.+++.++.+++|++++..||.|..++++|+.+
T Consensus 277 Rk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l 310 (327)
T KOG1581|consen 277 RKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFL 310 (327)
T ss_pred HHHHHHHHHHHHhCCccchhhccCeeeehHHHHH
Confidence 9999999999999999999999999999999865
No 34
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=98.95 E-value=3.3e-07 Score=86.51 Aligned_cols=234 Identities=13% Similarity=0.118 Sum_probs=160.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCcc----hhhhHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHH-hhHHHHHHHHHH
Q 015064 153 PASFCAVRFVMSAIPFLPFVFWARDDV----KTRNAGIELGLWVSLGYFVEALGLLTSDAGRASFIS-LFTVIVVPLFDG 227 (414)
Q Consensus 153 p~~~~~~R~~~a~l~ll~~~~~~~~~~----~~~~~~~~~gl~~~~~~~~~~~al~~~~~~~a~~l~-~~~Pl~~~ll~~ 227 (414)
|.+....-..-+.++-+......++.. +.....++.|++..++..+.+.|.++...+.+-.+. ..+-+.+.+++.
T Consensus 12 ~~~Q~lG~t~Gali~alv~~~~~~p~~~~~~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv 91 (269)
T PF06800_consen 12 PANQILGTTIGALIFALVVFLFRQPAFSMSGTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGV 91 (269)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHH
Confidence 444444444444444444444444443 334455667888999999999999999999987777 456666777887
Q ss_pred -HhcccCchhH----HHHHHHHHHhhhhhcccCCC---------CchhhHHHHHHHHHHHHHHHHHhHhhhccCCCCchh
Q 015064 228 -MLGAIIPAHT----WFGVLISALGVGMLECSGSP---------PSVGDFLNFLSAIFFGIHMLRTERISRSTKKENFLP 293 (414)
Q Consensus 228 -~l~er~~~~~----~~gi~l~~~Gv~li~~~~~~---------~~~G~llal~aa~~~al~~v~~~~~~~~~~~~~~~~ 293 (414)
+++|--+..+ .+|+++.++|+++....+.. ...|....+.+.+.|..|.+..|.. + .|+..
T Consensus 92 ~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~~--~---~~~~~ 166 (269)
T PF06800_consen 92 LFFGEWTTTTQKIIGFLALVLIIIGVILTSYQDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKAF--H---VSGWS 166 (269)
T ss_pred hhcCCCCCcchHHHHHHHHHHHHHHHHHhccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHhc--C---CChhH
Confidence 6999777644 45888899999988865321 2468999999999999999987663 2 44555
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCcchhhhhccccchhhHHHHHHHHHHHHHHHHHHHHHHhccCChhHHHH
Q 015064 294 LLGYEICVVALLSTIWVLVGGWFDSSQDFDQSPWTWTMLWDWMVTFPWVPALYTGIFSTGICLWIEIAAMRDVSATETAI 373 (414)
Q Consensus 294 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ll~lgv~~~~~~~~l~~~al~~~~a~~~s~ 373 (414)
..+-|.+.-.+....+.... ..... +... |.. +..|+ .-.++..++..+.++.+.+..-.
T Consensus 167 ~~lPqaiGm~i~a~i~~~~~--~~~~~--~k~~--------------~~n-il~G~-~w~ignl~~~is~~~~G~a~af~ 226 (269)
T PF06800_consen 167 AFLPQAIGMLIGAFIFNLFS--KKPFF--EKKS--------------WKN-ILTGL-IWGIGNLFYLISAQKNGVATAFT 226 (269)
T ss_pred hHHHHHHHHHHHHHHHhhcc--ccccc--ccch--------------HHh-hHHHH-HHHHHHHHHHHhHHhccchhhhh
Confidence 55544333333333332222 11111 1111 222 23344 34667888999999999999999
Q ss_pred HhhhHHHHHHHHHHHHhcCCCchh----hHHHHHHHHHhhhc
Q 015064 374 IYGLEPLWGAGFAWFLLGERWSTA----GWIGAALVLDVQIF 411 (414)
Q Consensus 374 ~~~l~pv~a~l~~~~~lge~~s~~----~~iG~~LIi~g~~l 411 (414)
+.-+.++.+.+.|.+++||.=+.. .++|..+|++|.++
T Consensus 227 lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il 268 (269)
T PF06800_consen 227 LSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL 268 (269)
T ss_pred HHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence 999999999999999999998766 44689999888775
No 35
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=98.93 E-value=3.1e-08 Score=95.45 Aligned_cols=131 Identities=16% Similarity=0.057 Sum_probs=97.6
Q ss_pred hHHHHHHHHHHHHHHHHHhHhhhccCCCCchhHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCcchhhhhccccchhhH
Q 015064 262 DFLNFLSAIFFGIHMLRTERISRSTKKENFLPLLGYEICVVALLSTIWVLVGGWFDSSQDFDQSPWTWTMLWDWMVTFPW 341 (414)
Q Consensus 262 ~llal~aa~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~ 341 (414)
.++.++++++++...+..|+..++. ++ ..++......+...|+............. ++.|
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~~---~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~---------------~~~~ 62 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADKE---PD--FLWWALLAHSVLLTPYGLWYLAQVGWSRL---------------PATF 62 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCch---hH--HHHHHHHHHHHHHHHHHHHhcccCCCCCc---------------chhh
Confidence 4678999999999999999877652 22 23555555555555554432111111100 0113
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCChhHHHHHhhhHHHHHHHHHHHHhcCCCchhhHHHHHHHHHhhhcc
Q 015064 342 VPALYTGIFSTGICLWIEIAAMRDVSATETAIIYGLEPLWGAGFAWFLLGERWSTAGWIGAALVLDVQIFL 412 (414)
Q Consensus 342 ~~ll~lgv~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~~~lge~~s~~~~iG~~LIi~g~~l~ 412 (414)
+..+..+.+.....+.++++++++.+++.++++.++.|+++.+++++++||+++..+++|.++++.|+++.
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll 133 (281)
T TIGR03340 63 WLLLAISAVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVL 133 (281)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence 44555566677788889999999999999999999999999999999999999999999999999998753
No 36
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=98.87 E-value=7.8e-08 Score=83.65 Aligned_cols=148 Identities=14% Similarity=0.096 Sum_probs=115.4
Q ss_pred hhHHHHHHHHHHHHHHHHHhHhhhcc----CCCCchhHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCcchhhhhcccc
Q 015064 261 GDFLNFLSAIFFGIHMLRTERISRST----KKENFLPLLGYEICVVALLSTIWVLVGGWFDSSQDFDQSPWTWTMLWDWM 336 (414)
Q Consensus 261 G~llal~aa~~~al~~v~~~~~~~~~----~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~ 336 (414)
|.++++.+.++.+++.+..|+..++. ...++..+..+....+.+...+.....+............. .+..
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~-----~~~~ 75 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFG-----EELS 75 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhh-----hhhc
Confidence 67899999999999999999988774 45889999999999999999888777765432211100000 0000
Q ss_pred -chhhHHHHHHHHHHHHHHHHHHHHHHhccCChhHHHHHhhhHHHHHHHHHHHHhcCCCchhhHHHHHHHHHhhhcccC
Q 015064 337 -VTFPWVPALYTGIFSTGICLWIEIAAMRDVSATETAIIYGLEPLWGAGFAWFLLGERWSTAGWIGAALVLDVQIFLPR 414 (414)
Q Consensus 337 -~~~~~~~ll~lgv~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~~~lge~~s~~~~iG~~LIi~g~~l~~r 414 (414)
.++.+..++..|+... +-....+..+++++|...++...+..+...+++++++||+++..+++|.++.++|.++.++
T Consensus 76 ~~~~~~~~~~~~~~~~~-~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy 153 (153)
T PF03151_consen 76 SDPNFIFLLILSGLLAF-LYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY 153 (153)
T ss_pred chHHHHHHHHHHHHHHH-HHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence 1234556666666554 4555888999999999999999999999999999999999999999999999999987654
No 37
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=98.86 E-value=2.6e-07 Score=86.93 Aligned_cols=251 Identities=13% Similarity=0.039 Sum_probs=175.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC--cc--------hhhhHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHhhHHHHH
Q 015064 153 PASFCAVRFVMSAIPFLPFVFWARD--DV--------KTRNAGIELGLWVSLGYFVEALGLLTSDAGRASFISLFTVIVV 222 (414)
Q Consensus 153 p~~~~~~R~~~a~l~ll~~~~~~~~--~~--------~~~~~~~~~gl~~~~~~~~~~~al~~~~~~~a~~l~~~~Pl~~ 222 (414)
|..++...+++-.++.....+..++ ++ ...++....|++......+.+++++|++.+..++.-+..++|+
T Consensus 45 PLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalata~DIGLSN~sl~yVtlSlYTM~KSSsi~FI 124 (349)
T KOG1443|consen 45 PLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALATALDIGLSNWSLEYVTLSLYTMTKSSSILFI 124 (349)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhhhcccccccceeeeeeeeeeeeccccHHHHH
Confidence 7777777766655554443332211 11 1223444667777788889999999999999999999999999
Q ss_pred HHHHHHhc-ccCchhHHHHHHHHHHhhhhhcccCCCC-chhhHHHHHHHHHHHHHHHHHhHhhhccC--CCCchhHHHHH
Q 015064 223 PLFDGMLG-AIIPAHTWFGVLISALGVGMLECSGSPP-SVGDFLNFLSAIFFGIHMLRTERISRSTK--KENFLPLLGYE 298 (414)
Q Consensus 223 ~ll~~~l~-er~~~~~~~gi~l~~~Gv~li~~~~~~~-~~G~llal~aa~~~al~~v~~~~~~~~~~--~~~~~~~~~~~ 298 (414)
.+++.++| ||+++.-..-+++..+|+++.+.....+ ..|.++.++++.+-++-....+.+.++.+ ..+|....+..
T Consensus 125 llFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTqf~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l 204 (349)
T KOG1443|consen 125 LLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQFNIEGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHL 204 (349)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccceeehhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHh
Confidence 99999665 9999999999999999999998876554 58888988888888887777777666554 14566666665
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCCCCCcchhhhhccccchh-hHHHHHHHHHHHHHHHHH---HHHHHhccCChhHHHHH
Q 015064 299 ICVVALLSTIWVLVGGWFDSSQDFDQSPWTWTMLWDWMVTF-PWVPALYTGIFSTGICLW---IEIAAMRDVSATETAII 374 (414)
Q Consensus 299 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~-~~~~ll~lgv~~~~~~~~---l~~~al~~~~a~~~s~~ 374 (414)
.-.-.+.++|..+..+++...... ..|.-. | +. .+..+..+++ +...++. .-+.-+.+++.-..++.
T Consensus 205 ~p~M~~~Ll~~~l~fEG~~~~~~s--~~f~~~---d---~~~~~rv~g~i~l-~g~laF~l~~sEflLl~~Ts~ltlSIa 275 (349)
T KOG1443|consen 205 QPWMSIGLLPLSLLFEGLHLITSS--SIFRFQ---D---TGLILRVIGLISL-GGLLAFLLEFSEFLLLSRTSSLTLSIA 275 (349)
T ss_pred hhHHHHHHHHHHHHHcccccchhh--hHHHhc---C---ccHHHHHHHHHHH-HHHHHHHHHHHHHheeeeccceeeeHH
Confidence 566666666766666655433211 111100 0 11 1233322222 2222332 23445788888888999
Q ss_pred hhhHHHHHHHHHHHHhcCCCchhhHHHHHHHHHhhhcc
Q 015064 375 YGLEPLWGAGFAWFLLGERWSTAGWIGAALVLDVQIFL 412 (414)
Q Consensus 375 ~~l~pv~a~l~~~~~lge~~s~~~~iG~~LIi~g~~l~ 412 (414)
....-+-..++|..+.++.++..-|.|..+...|+.+-
T Consensus 276 GI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~ 313 (349)
T KOG1443|consen 276 GIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLH 313 (349)
T ss_pred HHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999988753
No 38
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=98.85 E-value=7.1e-08 Score=91.55 Aligned_cols=137 Identities=18% Similarity=0.235 Sum_probs=103.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHhHhhhccCCCCchhHHHHHHHHHHHHHHHHHHHhccCCCC-CCCCCCcchhhhhccccch
Q 015064 260 VGDFLNFLSAIFFGIHMLRTERISRSTKKENFLPLLGYEICVVALLSTIWVLVGGWFDSS-QDFDQSPWTWTMLWDWMVT 338 (414)
Q Consensus 260 ~G~llal~aa~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~w~~~ 338 (414)
.|.++.++++++|+...+..|.. .+ .++..+.+++++.+.+...+........... ....... .
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~~-~~---~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~-----------~ 66 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKLL-KP---LPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQ-----------K 66 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHh-cc---CCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcc-----------c
Confidence 48899999999999999999974 33 6789999999999887766654443211100 0000000 0
Q ss_pred hh-HHHHHHHHHHHHHHHHHHHHHHhccCChhHHHHHhhhHHHHHHHHHHHHhcCCCchhhHHHHHHHHHhhhcc
Q 015064 339 FP-WVPALYTGIFSTGICLWIEIAAMRDVSATETAIIYGLEPLWGAGFAWFLLGERWSTAGWIGAALVLDVQIFL 412 (414)
Q Consensus 339 ~~-~~~ll~lgv~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~~~lge~~s~~~~iG~~LIi~g~~l~ 412 (414)
+. +..+...|++ ..+.+.+++.++++.+++.++.+.++.|+++.++++++++|+++..+++|..+.++|+++.
T Consensus 67 ~~~~~~~~~~g~~-~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li 140 (256)
T TIGR00688 67 RPLILSLLLCGLL-IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISN 140 (256)
T ss_pred chHHHHHHHHHHH-HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 11 2334444444 6678889999999999999999999999999999999999999999999999999998753
No 39
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=98.83 E-value=5.6e-08 Score=94.38 Aligned_cols=138 Identities=14% Similarity=0.132 Sum_probs=106.9
Q ss_pred CchhhHHHHHHHHHHHHHHHHHhHhhhccCCCCchhHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCcchhhhhccccc
Q 015064 258 PSVGDFLNFLSAIFFGIHMLRTERISRSTKKENFLPLLGYEICVVALLSTIWVLVGGWFDSSQDFDQSPWTWTMLWDWMV 337 (414)
Q Consensus 258 ~~~G~llal~aa~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~ 337 (414)
...|.+++++++++|+...+..|.. .+ .++..+.++++.++.++..+............. ....
T Consensus 6 ~~~g~~~~l~a~~~wg~~~~~~k~~-~~---~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~-~~~~----------- 69 (296)
T PRK15430 6 TRQGVLLALAAYFIWGIAPAYFKLI-YY---VPADEILTHRVIWSFFFMVVLMSICRQWSYLKT-LIQT----------- 69 (296)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHh-cC---CCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHH-HHcC-----------
Confidence 3579999999999999999999764 33 678999999999998877665543321100000 0000
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhccCChhHHHHHhhhHHHHHHHHHHHHhcCCCchhhHHHHHHHHHhhhcc
Q 015064 338 TFPWVPALYTGIFSTGICLWIEIAAMRDVSATETAIIYGLEPLWGAGFAWFLLGERWSTAGWIGAALVLDVQIFL 412 (414)
Q Consensus 338 ~~~~~~ll~lgv~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~~~lge~~s~~~~iG~~LIi~g~~l~ 412 (414)
++.+. ....+.+..++.+.++++++++.+++.++.+.++.|++..++++++++|+++..+++|.++.++|+++.
T Consensus 70 ~~~~~-~~~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li 143 (296)
T PRK15430 70 PQKIF-MLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQ 143 (296)
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHH
Confidence 11122 334666777888999999999999999999999999999999999999999999999999999998763
No 40
>PRK13499 rhamnose-proton symporter; Provisional
Probab=98.81 E-value=8.4e-06 Score=79.98 Aligned_cols=276 Identities=14% Similarity=0.048 Sum_probs=167.5
Q ss_pred cchHHHHHHHHHHHHHhhhHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHH-----------HhcCcchhhhHHHHHHH
Q 015064 122 KKIRSIFLLNVITIVYASDIPILKAAEEIMHPASFCAVRFVMSAIPFLPFVF-----------WARDDVKTRNAGIELGL 190 (414)
Q Consensus 122 ~~~~g~l~~lla~~~wg~~~~~~k~~~~~~~p~~~~~~R~~~a~l~ll~~~~-----------~~~~~~~~~~~~~~~gl 190 (414)
+...|++..+++.++||+.++..|. .++.+ +|..+.-..+-.-++.++.. .+..+.......++.|+
T Consensus 4 ~~~~G~~~~~i~~~~~GS~~~p~K~-~k~w~-wE~~W~v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l~G~ 81 (345)
T PRK13499 4 AIILGIIWHLIGGASSGSFYAPFKK-VKKWS-WETMWSVGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFLFGA 81 (345)
T ss_pred hhHHHHHHHHHHHHHhhcccccccc-cCCCc-hhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHHHHH
Confidence 3467999999999999999999998 44333 23223211111111112111 01233445556677788
Q ss_pred HHHHHHHHHHHHHhhcchhHHHHHH-hhHHHHHHHHHH-HhcccC-------chhHHHHHHHHHHhhhhhcc----cCC-
Q 015064 191 WVSLGYFVEALGLLTSDAGRASFIS-LFTVIVVPLFDG-MLGAII-------PAHTWFGVLISALGVGMLEC----SGS- 256 (414)
Q Consensus 191 ~~~~~~~~~~~al~~~~~~~a~~l~-~~~Pl~~~ll~~-~l~er~-------~~~~~~gi~l~~~Gv~li~~----~~~- 256 (414)
+...++.+++.++++...+.+..+. .++-++..++.. +++|=. ...-.+|+++.++|+++... .+.
T Consensus 82 ~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~~k~~~ 161 (345)
T PRK13499 82 LWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQLKERK 161 (345)
T ss_pred HHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhhhcccc
Confidence 8999999999999999999975554 677788888887 466422 13468899999999999886 221
Q ss_pred ---------CCchhhHHHHHHHHHHHHHHH-------HHhHhhhccCCCCchhHHHHHHH---HHHHHHHH-HHHHh-cc
Q 015064 257 ---------PPSVGDFLNFLSAIFFGIHML-------RTERISRSTKKENFLPLLGYEIC---VVALLSTI-WVLVG-GW 315 (414)
Q Consensus 257 ---------~~~~G~llal~aa~~~al~~v-------~~~~~~~~~~~~~~~~~~~~~~~---~~~v~~~~-~~~~~-~~ 315 (414)
....|..+++++.+.+++|.. ..+... .. +.++.....-+.. +++++.-. +.... ..
T Consensus 162 ~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~-~~-g~~~~~~~lp~~~~~~~G~~~~n~~~~~~~~~k 239 (345)
T PRK13499 162 MGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAA-AL-GVDPLYAALPSYVVIMGGGAITNLGFCFIRLAK 239 (345)
T ss_pred cccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhh-hc-CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 246899999999999999994 333211 11 2344443333333 33332221 11211 01
Q ss_pred CCCC---CCCCCC-cchhhhhccccchhhHHHHHHHHHHHHHHHHHHHHHHhccCChhHHHH---Hh-hhHHHHHHHHHH
Q 015064 316 FDSS---QDFDQS-PWTWTMLWDWMVTFPWVPALYTGIFSTGICLWIEIAAMRDVSATETAI---IY-GLEPLWGAGFAW 387 (414)
Q Consensus 316 ~~~~---~~~~~~-~~~~~~~~~w~~~~~~~~ll~lgv~~~~~~~~l~~~al~~~~a~~~s~---~~-~l~pv~a~l~~~ 387 (414)
.... .+.... ...+. .. .+-.++.+.=.+++.++..+-++.+...... +. .+..+++.+.|.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~---------n~-l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi 309 (345)
T PRK13499 240 NKDLSLKADFSLAKPLLIT---------NV-LLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL 309 (345)
T ss_pred CCCcccchhccccchhHHH---------HH-HHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh
Confidence 1111 010000 00000 01 1223333344667778888888776554444 44 777799999998
Q ss_pred HHhcCCCc------hhhHHHHHHHHHhhhcc
Q 015064 388 FLLGERWS------TAGWIGAALVLDVQIFL 412 (414)
Q Consensus 388 ~~lge~~s------~~~~iG~~LIi~g~~l~ 412 (414)
++||.=+ ..-++|.+++++|.++.
T Consensus 310 -~lkE~K~a~~k~~~~l~~G~vliI~g~~li 339 (345)
T PRK13499 310 -VLKEWKGASRRPVRVLSLGCVVIILAANIV 339 (345)
T ss_pred -hhhhccCCCccchhHHHHHHHHHHHHHHHH
Confidence 5999877 56688999999988763
No 41
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=98.78 E-value=2.5e-07 Score=89.72 Aligned_cols=129 Identities=13% Similarity=0.118 Sum_probs=102.6
Q ss_pred hHHHHHHHHHHHHHhhhHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHhcCc-c---hhhhHHHHHHHH-HHHHHHH
Q 015064 124 IRSIFLLNVITIVYASDIPILKAAEEIMHPASFCAVRFVMSAIPFLPFVFWARDD-V---KTRNAGIELGLW-VSLGYFV 198 (414)
Q Consensus 124 ~~g~l~~lla~~~wg~~~~~~k~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~-~---~~~~~~~~~gl~-~~~~~~~ 198 (414)
..|.++.++++++|+...+..|...++.++....... .++.++++++....... . ..+...+..|+. ..+++.+
T Consensus 147 ~~G~ll~l~aa~~~a~~~v~~r~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~lgv~~t~~~~~l 225 (293)
T PRK10532 147 LTGAALALGAGACWAIYILSGQRAGAEHGPATVAIGS-LIAALIFVPIGALQAGEALWHWSILPLGLAVAILSTALPYSL 225 (293)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHH-HHHHHHHHHHHHHccCcccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 4689999999999999999999988778887775544 55566666665544321 1 111223455665 4578889
Q ss_pred HHHHHhhcchhHHHHHHhhHHHHHHHHHH-HhcccCchhHHHHHHHHHHhhhhhcc
Q 015064 199 EALGLLTSDAGRASFISLFTVIVVPLFDG-MLGAIIPAHTWFGVLISALGVGMLEC 253 (414)
Q Consensus 199 ~~~al~~~~~~~a~~l~~~~Pl~~~ll~~-~l~er~~~~~~~gi~l~~~Gv~li~~ 253 (414)
+++++++.++++++++..++|++..++++ +++|+++..+++|.++.+.|++....
T Consensus 226 ~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~ 281 (293)
T PRK10532 226 EMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTL 281 (293)
T ss_pred HHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999998 79999999999999999999988753
No 42
>PRK11689 aromatic amino acid exporter; Provisional
Probab=98.71 E-value=3.9e-07 Score=88.42 Aligned_cols=128 Identities=13% Similarity=0.140 Sum_probs=97.2
Q ss_pred hHHHHHHHHHHHHHhhhHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHhcCc-----chhhhHHHHHHHHHHHHHHH
Q 015064 124 IRSIFLLNVITIVYASDIPILKAAEEIMHPASFCAVRFVMSAIPFLPFVFWARDD-----VKTRNAGIELGLWVSLGYFV 198 (414)
Q Consensus 124 ~~g~l~~lla~~~wg~~~~~~k~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~-----~~~~~~~~~~gl~~~~~~~~ 198 (414)
..|.+++++++++|+...+..|...++.++....+ ..+.+.+.+........ ...+...+..|+...+++.+
T Consensus 155 ~~G~~~~l~aa~~~A~~~v~~k~~~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~t~~~~~l 231 (295)
T PRK11689 155 PLSYGLAFIGAFIWAAYCNVTRKYARGKNGITLFF---ILTALALWIKYFLSPQPAMVFSLPAIIKLLLAAAAMGFGYAA 231 (295)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhccCCCCchhHHH---HHHHHHHHHHHHHhcCccccCCHHHHHHHHHHHHHHHHHHHH
Confidence 45899999999999999999999877777765433 22333333322222111 11222333345556678899
Q ss_pred HHHHHhhcchhHHHHHHhhHHHHHHHHHH-HhcccCchhHHHHHHHHHHhhhhhccc
Q 015064 199 EALGLLTSDAGRASFISLFTVIVVPLFDG-MLGAIIPAHTWFGVLISALGVGMLECS 254 (414)
Q Consensus 199 ~~~al~~~~~~~a~~l~~~~Pl~~~ll~~-~l~er~~~~~~~gi~l~~~Gv~li~~~ 254 (414)
+++++++.+++.++.+.++.|++..++++ +++|+++..+++|.++.+.|+++....
T Consensus 232 ~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~ 288 (295)
T PRK11689 232 WNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLA 288 (295)
T ss_pred HHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhh
Confidence 99999999999999999999999999998 799999999999999999999887643
No 43
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=98.71 E-value=1.7e-07 Score=82.83 Aligned_cols=205 Identities=12% Similarity=0.044 Sum_probs=151.1
Q ss_pred HHHHHHHHHHHHHHHhhcchhHHHHHHhhHHHHHHHHHH-HhcccCchhHHHHHHHHHHhhhhhcccCC---CCchhhHH
Q 015064 189 GLWVSLGYFVEALGLLTSDAGRASFISLFTVIVVPLFDG-MLGAIIPAHTWFGVLISALGVGMLECSGS---PPSVGDFL 264 (414)
Q Consensus 189 gl~~~~~~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~-~l~er~~~~~~~gi~l~~~Gv~li~~~~~---~~~~G~ll 264 (414)
.++....++.|..|++.+++++++-+.....-|+.++++ .+|+|+...++++.++++.|++++...++ ....|..+
T Consensus 60 ~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~a~e~iGi~~ 139 (290)
T KOG4314|consen 60 SIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEHADEIIGIAC 139 (290)
T ss_pred EEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchhhhhhhhHHH
Confidence 344556789999999999999999999999999999999 69999999999999999999999996554 35799999
Q ss_pred HHHHHHHHHHHHHHHhHhhhccCCCCchhHHHHHHHHHH---H-HHHHHHHH-hccCCCCCCCCCCcchhhhhccccchh
Q 015064 265 NFLSAIFFGIHMLRTERISRSTKKENFLPLLGYEICVVA---L-LSTIWVLV-GGWFDSSQDFDQSPWTWTMLWDWMVTF 339 (414)
Q Consensus 265 al~aa~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~---v-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~w~~~~ 339 (414)
+++++...|+|-+.-|+.....+ .. ....++...+. . ...|.... ...-+..+... ..
T Consensus 140 AV~SA~~aAlYKV~FK~~iGnAn-~G--daa~FmS~LGF~NL~~~~~~~lIL~~T~VE~~qsFA--------------~~ 202 (290)
T KOG4314|consen 140 AVGSAFMAALYKVLFKMFIGNAN-FG--DAAHFMSCLGFFNLCFISFPALILAFTGVEHLQSFA--------------AA 202 (290)
T ss_pred HHHHHHHHHHHHHHHHHHhccCc-ch--hHHHHHHHHHHHHHHHHhhhHHHHHHhchHHHHHHh--------------hC
Confidence 99999999999999999876543 11 11111111111 1 11111111 11111111111 11
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhccCChhHHHHHhhhHHHHHHHHHHHHhcCCCchhhHHHHHHHHHhhhc
Q 015064 340 PWVPALYTGIFSTGICLWIEIAAMRDVSATETAIIYGLEPLWGAGFAWFLLGERWSTAGWIGAALVLDVQIF 411 (414)
Q Consensus 340 ~~~~ll~lgv~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~~~lge~~s~~~~iG~~LIi~g~~l 411 (414)
.|..+...+......-+ +.+.++..+.|-..++-......-....+.++-+-..+...+.|..+|+.|.++
T Consensus 203 PWG~l~G~A~L~lAFN~-~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiL 273 (290)
T KOG4314|consen 203 PWGCLCGAAGLSLAFNF-LINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFIL 273 (290)
T ss_pred CchhhhhHHHHHHHHhh-heeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHh
Confidence 27777777776655444 778899999999999999999999999998766667788899999999988765
No 44
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.69 E-value=5.9e-07 Score=76.05 Aligned_cols=119 Identities=12% Similarity=0.061 Sum_probs=90.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHhHhhhccCCCCchhHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCcchhhhhccccchh
Q 015064 260 VGDFLNFLSAIFFGIHMLRTERISRSTKKENFLPLLGYEICVVALLSTIWVLVGGWFDSSQDFDQSPWTWTMLWDWMVTF 339 (414)
Q Consensus 260 ~G~llal~aa~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~ 339 (414)
.|.++.+.+.++-+...+..|+-.++.+..+ .... ... .... . . .
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~~~---~~~~-----~~~-~~~~-~-~----------~-------------- 46 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMSRLPLLS---HAWD-----FIA-ALLA-F-G----------L-------------- 46 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhCCCcc---chhH-----HHH-HHHH-H-h----------c--------------
Confidence 3678888899999999999998776654222 1100 000 0000 0 0 0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhccCChhHHHHHhhhHHHHHHHHHHH--HhcCCCchhhHHHHHHHHHhhhcccC
Q 015064 340 PWVPALYTGIFSTGICLWIEIAAMRDVSATETAIIYGLEPLWGAGFAWF--LLGERWSTAGWIGAALVLDVQIFLPR 414 (414)
Q Consensus 340 ~~~~ll~lgv~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~~--~lge~~s~~~~iG~~LIi~g~~l~~r 414 (414)
-...+++|++++++++.+|.+++++.+.+.+.++..+.++...+.++. ++||++++.+++|.++|++|+++.+|
T Consensus 47 -p~~~i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~ 122 (129)
T PRK02971 47 -ALRAVLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINL 122 (129)
T ss_pred -cHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhcc
Confidence 112568899999999999999999999999999999999888888874 89999999999999999999998764
No 45
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=98.68 E-value=4.6e-07 Score=90.10 Aligned_cols=134 Identities=15% Similarity=0.035 Sum_probs=106.7
Q ss_pred hhHHHHHHHHHHHHHHHHHhHhhhccCCCCchhHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCcchhhhhccccchhh
Q 015064 261 GDFLNFLSAIFFGIHMLRTERISRSTKKENFLPLLGYEICVVALLSTIWVLVGGWFDSSQDFDQSPWTWTMLWDWMVTFP 340 (414)
Q Consensus 261 G~llal~aa~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~ 340 (414)
-...+++.-++|+.+.++.|...+. +.++....++++.+++++++++..........+ ... | +.
T Consensus 14 ~~~~~~~~q~~~~~~~~~~k~a~~~--G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~---~~~--~---------~~ 77 (358)
T PLN00411 14 FLTAMLATETSVVGISTLFKVATSK--GLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLP---PLS--V---------SI 77 (358)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHC--CCCccHHHHHHHHHHHHHHHHHHHHHHHhcccC---cch--H---------HH
Confidence 3456677789999999999988754 478899999999999998888766543211111 011 1 12
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCChhHHHHHhhhHHHHHHHHHHHH------hcCCCchhhHHHHHHHHHhhhc
Q 015064 341 WVPALYTGIFSTGICLWIEIAAMRDVSATETAIIYGLEPLWGAGFAWFL------LGERWSTAGWIGAALVLDVQIF 411 (414)
Q Consensus 341 ~~~ll~lgv~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~~~------lge~~s~~~~iG~~LIi~g~~l 411 (414)
|..+..+|+++ .+.+.+++.++++++++.++++.++.|+++.++++++ ++|+++..+++|.++-++|+.+
T Consensus 78 ~~~l~l~g~~g-~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~l 153 (358)
T PLN00411 78 LSKIGLLGFLG-SMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALV 153 (358)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHH
Confidence 56677778877 4566789999999999999999999999999999998 6999999999999999988775
No 46
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=98.66 E-value=7.4e-07 Score=86.33 Aligned_cols=130 Identities=10% Similarity=0.040 Sum_probs=104.3
Q ss_pred hHHHHHHHHHHHHHhhhHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHhcCc------chhhhHHHHHHHH-HHHHH
Q 015064 124 IRSIFLLNVITIVYASDIPILKAAEEIMHPASFCAVRFVMSAIPFLPFVFWARDD------VKTRNAGIELGLW-VSLGY 196 (414)
Q Consensus 124 ~~g~l~~lla~~~wg~~~~~~k~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~------~~~~~~~~~~gl~-~~~~~ 196 (414)
..|.++.++++++|+...+..|...+. ++.....+.+.++.+++.++....... .+.+......|+. ...++
T Consensus 149 ~~G~l~~l~a~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~~ 227 (292)
T PRK11272 149 PWGAILILIASASWAFGSVWSSRLPLP-VGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIAI 227 (292)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCC-cchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHHH
Confidence 468999999999999999999986643 445667788888888877766543221 1223333444555 45788
Q ss_pred HHHHHHHhhcchhHHHHHHhhHHHHHHHHHH-HhcccCchhHHHHHHHHHHhhhhhccc
Q 015064 197 FVEALGLLTSDAGRASFISLFTVIVVPLFDG-MLGAIIPAHTWFGVLISALGVGMLECS 254 (414)
Q Consensus 197 ~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~-~l~er~~~~~~~gi~l~~~Gv~li~~~ 254 (414)
.++++++++.+++.++++.++.|++++++++ +++|+++..+++|.++.+.|++++...
T Consensus 228 ~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~ 286 (292)
T PRK11272 228 SAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLG 286 (292)
T ss_pred HHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999998 799999999999999999999887643
No 47
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=98.57 E-value=2.9e-06 Score=76.49 Aligned_cols=253 Identities=10% Similarity=0.056 Sum_probs=183.9
Q ss_pred HHHHHHhhhc--CC-HHHHHHHHHHHHHHHHHHHHHHh--cCcchhhhHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHH
Q 015064 141 IPILKAAEEI--MH-PASFCAVRFVMSAIPFLPFVFWA--RDDVKTRNAGIELGLWVSLGYFVEALGLLTSDAGRASFIS 215 (414)
Q Consensus 141 ~~~~k~~~~~--~~-p~~~~~~R~~~a~l~ll~~~~~~--~~~~~~~~~~~~~gl~~~~~~~~~~~al~~~~~~~a~~l~ 215 (414)
.+..|+..+. ++ -+.+++.+.++..+-++.+-+.+ +-+.+..+.+....++.....+.--.+++|++....++.-
T Consensus 22 TltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~fR~t~aK~WfpiSfLLv~MIyt~SKsLqyL~vpiYTiFK 101 (309)
T COG5070 22 TLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVEFRLTKAKKWFPISFLLVVMIYTSSKSLQYLAVPIYTIFK 101 (309)
T ss_pred HHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhheehhhhhhhcCHHHHHHHHHHhcccceeeeeeeHHHHhc
Confidence 3455666653 22 33445555555555444433322 1223445556666777777777778999999999999999
Q ss_pred hhHHHHHHHHHH-HhcccCchhHHHHHHHHHHhhhhhcccCC--------CCchhhHHHHHHHHHHHHHHHHHhHhhhcc
Q 015064 216 LFTVIVVPLFDG-MLGAIIPAHTWFGVLISALGVGMLECSGS--------PPSVGDFLNFLSAIFFGIHMLRTERISRST 286 (414)
Q Consensus 216 ~~~Pl~~~ll~~-~l~er~~~~~~~gi~l~~~Gv~li~~~~~--------~~~~G~llal~aa~~~al~~v~~~~~~~~~ 286 (414)
++..+.++..-. ++|.|++..+....++.++.-+.-.+.+. ..+.|+++...-++.-+.+....|+..+-.
T Consensus 102 NltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN~GY~Wm~~NclssaafVL~mrkri~lt 181 (309)
T COG5070 102 NLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILNPGYLWMFTNCLSSAAFVLIMRKRIKLT 181 (309)
T ss_pred cceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccCCceEEEehhhHhHHHHHHHHHHhhccc
Confidence 999999998887 79999999998888877777666665543 358999999999999999999998865432
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCcchhhhhccccchhhHHHHHHHHHHHHHHHHHHHHHHhccC
Q 015064 287 KKENFLPLLGYEICVVALLSTIWVLVGGWFDSSQDFDQSPWTWTMLWDWMVTFPWVPALYTGIFSTGICLWIEIAAMRDV 366 (414)
Q Consensus 287 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ll~lgv~~~~~~~~l~~~al~~~ 366 (414)
. ......++|..+++..+++.+.+..+...+.--.. . .++....++.+.|+.+.+++| +-.+.++.+
T Consensus 182 N-f~d~dtmfYnNllslPiL~~~s~~~edws~~n~an--n---------l~~d~l~am~ISgl~svgiSy-~saWcvrVt 248 (309)
T COG5070 182 N-FKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLAN--N---------LSVDSLMAMFISGLCSVGISY-CSAWCVRVT 248 (309)
T ss_pred c-cchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhc--C---------CChHHHHHHHHHHHHHhhhhh-ccceeEeeh
Confidence 2 34466788888888888887777765433221010 1 113345667788888778887 778899999
Q ss_pred ChhHHHHHhhhHHHHHHHHHHHHhcCCCchhhHHHHHHHH
Q 015064 367 SATETAIIYGLEPLWGAGFAWFLLGERWSTAGWIGAALVL 406 (414)
Q Consensus 367 ~a~~~s~~~~l~pv~a~l~~~~~lge~~s~~~~iG~~LIi 406 (414)
+.+.-+++..++-.-..+-|.++|+|+.+...+....+=.
T Consensus 249 SSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGf 288 (309)
T COG5070 249 SSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGF 288 (309)
T ss_pred hhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHH
Confidence 9999999999999999999999999999988887766544
No 48
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=98.53 E-value=2.6e-06 Score=82.71 Aligned_cols=258 Identities=13% Similarity=0.125 Sum_probs=148.7
Q ss_pred cchHHHHHHHHHHHHHhhhHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHhcCcch-hhhHHHHHHHH-HHHHHHHH
Q 015064 122 KKIRSIFLLNVITIVYASDIPILKAAEEIMHPASFCAVRFVMSAIPFLPFVFWARDDVK-TRNAGIELGLW-VSLGYFVE 199 (414)
Q Consensus 122 ~~~~g~l~~lla~~~wg~~~~~~k~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~-~~~~~~~~gl~-~~~~~~~~ 199 (414)
....|+++.++++++-+....+.|....+.+... .| .+++.++ .+++.+..|+. ..++..+.
T Consensus 4 ~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~---~~-------------~~~~~~~~l~~~~W~~G~~~~~~g~~~~ 67 (300)
T PF05653_consen 4 DFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGS---LR-------------AGSGGRSYLRRPLWWIGLLLMVLGEILN 67 (300)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc---cc-------------ccchhhHHHhhHHHHHHHHHHhcchHHH
Confidence 3467899999999999998888887654222100 00 0001111 12334555554 45777889
Q ss_pred HHHHhhcchhHHHHHHhhHHHHHHHHHH-HhcccCchhHHHHHHHHHHhhhhhcccC--CC--C----------chhh--
Q 015064 200 ALGLLTSDAGRASFISLFTVIVVPLFDG-MLGAIIPAHTWFGVLISALGVGMLECSG--SP--P----------SVGD-- 262 (414)
Q Consensus 200 ~~al~~~~~~~a~~l~~~~Pl~~~ll~~-~l~er~~~~~~~gi~l~~~Gv~li~~~~--~~--~----------~~G~-- 262 (414)
+.|+.+.|++..+.+..+.-++..+++. ++|||+++.++.|+.++++|..+++..+ .. . ..+.
T Consensus 68 ~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~~~~~~~t~~~l~~~~~~~~fl~ 147 (300)
T PF05653_consen 68 FVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAPKEEPIHTLDELIALLSQPGFLV 147 (300)
T ss_pred HHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCCCCCCcCCHHHHHHHhcCcceeh
Confidence 9999999999999999999999999998 7999999999999999999999876321 11 1 1111
Q ss_pred HHHHHHHHHHHHHHHHHhHhhhccCCCCchhHHHHHHHHHHHHHHH---H-HHHhccCCCCCCCCCCcchhhhhccccch
Q 015064 263 FLNFLSAIFFGIHMLRTERISRSTKKENFLPLLGYEICVVALLSTI---W-VLVGGWFDSSQDFDQSPWTWTMLWDWMVT 338 (414)
Q Consensus 263 llal~aa~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~w~~~ 338 (414)
...+...+...+.....+|..++ +.........+.++.-.+. . ..+...... ...+ .+|
T Consensus 148 y~~~~~~~~~~L~~~~~~r~g~~----~i~vyi~i~sl~Gs~tvl~~K~i~~~i~~~~~g-----~~~f--------~~~ 210 (300)
T PF05653_consen 148 YFILVLVLILILIFFIKPRYGRR----NILVYISICSLIGSFTVLSAKAISILIKLTFSG-----DNQF--------TYP 210 (300)
T ss_pred hHHHHHHHHHHHHHhhcchhccc----ceEEEEEEeccccchhhhHHHHHHHHHHHHhcC-----chhh--------hhh
Confidence 11122222223333333333222 1111111111111111110 0 011110000 0010 012
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhccCChhHHHHHhhhHHH-HHHHHHHHHhcCC--Cch----hhHHHHHHHHHhhhc
Q 015064 339 FPWVPALYTGIFSTGICLWIEIAAMRDVSATETAIIYGLEPL-WGAGFAWFLLGER--WST----AGWIGAALVLDVQIF 411 (414)
Q Consensus 339 ~~~~~ll~lgv~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv-~a~l~~~~~lge~--~s~----~~~iG~~LIi~g~~l 411 (414)
..|..++. -+++........++|+++.+++.+.++.+..=. .+++-+.++++|. .+. ....|..+++.|+++
T Consensus 211 ~~y~l~~~-~v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~~ii~GV~l 289 (300)
T PF05653_consen 211 LTYLLLLV-LVVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFLIIIIGVFL 289 (300)
T ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHhhhe
Confidence 23444433 344556677788899999999998877765544 4455677888875 444 345688888888887
Q ss_pred cc
Q 015064 412 LP 413 (414)
Q Consensus 412 ~~ 413 (414)
-+
T Consensus 290 L~ 291 (300)
T PF05653_consen 290 LS 291 (300)
T ss_pred ee
Confidence 54
No 49
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=98.48 E-value=3.9e-06 Score=81.56 Aligned_cols=124 Identities=18% Similarity=0.197 Sum_probs=95.2
Q ss_pred hHHHHHHHHHHHHHHHHHhHhhhccCCCCchhHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCcchhhhhccccchhhH
Q 015064 262 DFLNFLSAIFFGIHMLRTERISRSTKKENFLPLLGYEICVVALLSTIWVLVGGWFDSSQDFDQSPWTWTMLWDWMVTFPW 341 (414)
Q Consensus 262 ~llal~aa~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~ 341 (414)
.+++++++++|+...+..|...++ .++....++++.++++...+.. .. . ... +
T Consensus 6 ~l~~l~~~~~Wg~~~~~~k~~~~~---~~p~~~~~~R~~~a~~~l~~~~--~~-----~---~~~--------------~ 58 (299)
T PRK11453 6 GVLALLVVVVWGLNFVVIKVGLHN---MPPLMLAGLRFMLVAFPAIFFV--AR-----P---KVP--------------L 58 (299)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHhc---CCHHHHHHHHHHHHHHHHHHHh--cC-----C---CCc--------------h
Confidence 366889999999999999987654 7789999999988776554432 10 0 011 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcc-CChhHHHHHhhhHHHHHHHHHHHHhcCCCchhhHHHHHHHHHhhhcc
Q 015064 342 VPALYTGIFSTGICLWIEIAAMRD-VSATETAIIYGLEPLWGAGFAWFLLGERWSTAGWIGAALVLDVQIFL 412 (414)
Q Consensus 342 ~~ll~lgv~~~~~~~~l~~~al~~-~~a~~~s~~~~l~pv~a~l~~~~~lge~~s~~~~iG~~LIi~g~~l~ 412 (414)
..++..|+......+.+++.++++ .+++.++.+.++.|+++.++++++++|+++..+++|.++.++|+++.
T Consensus 59 ~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll 130 (299)
T PRK11453 59 NLLLGYGLTISFGQFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVL 130 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHh
Confidence 223344554445555677788887 58899999999999999999999999999999999999999998753
No 50
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.45 E-value=3.3e-06 Score=69.65 Aligned_cols=68 Identities=18% Similarity=0.238 Sum_probs=62.5
Q ss_pred HHHHHHHHHHHHHHHHHhccCChhHHHHHhhhHHHHHHHHHHHHhcCCCchhhHHHHHHHHHhhhccc
Q 015064 346 YTGIFSTGICLWIEIAAMRDVSATETAIIYGLEPLWGAGFAWFLLGERWSTAGWIGAALVLDVQIFLP 413 (414)
Q Consensus 346 ~lgv~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~~~lge~~s~~~~iG~~LIi~g~~l~~ 413 (414)
.+++++.++++.++.+++++.+.+.+.++.++.++++.+++++++||++++.+++|.++|++|+++..
T Consensus 41 ~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 41 GLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 34557778899999999999999999999999999999999999999999999999999999987653
No 51
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=98.45 E-value=1.5e-07 Score=87.21 Aligned_cols=248 Identities=15% Similarity=0.098 Sum_probs=182.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcC------------cchhhhHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHhhHH
Q 015064 152 HPASFCAVRFVMSAIPFLPFVFWARD------------DVKTRNAGIELGLWVSLGYFVEALGLLTSDAGRASFISLFTV 219 (414)
Q Consensus 152 ~p~~~~~~R~~~a~l~ll~~~~~~~~------------~~~~~~~~~~~gl~~~~~~~~~~~al~~~~~~~a~~l~~~~P 219 (414)
.|..+.+...++...+.+.+-...++ +.+.-+..+.+.+...++..+-.++++|.+++..-+-..+..
T Consensus 60 ~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVfi~mI~fnnlcL~yVgVaFYyvgRsLtt 139 (347)
T KOG1442|consen 60 APLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVVFILMISFNNLCLKYVGVAFYYVGRSLTT 139 (347)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhheeeeehhccceehhhcceEEEEeccchhh
Confidence 48888888888877666654432211 111222333444444555667788999999999888899999
Q ss_pred HHHHHHHH-HhcccCchhHHHHHHHHHHhhhhhcccC----CCCchhhHHHHHHHHHHHHHHHHHhHhhhccCCCCchhH
Q 015064 220 IVVPLFDG-MLGAIIPAHTWFGVLISALGVGMLECSG----SPPSVGDFLNFLSAIFFGIHMLRTERISRSTKKENFLPL 294 (414)
Q Consensus 220 l~~~ll~~-~l~er~~~~~~~gi~l~~~Gv~li~~~~----~~~~~G~llal~aa~~~al~~v~~~~~~~~~~~~~~~~~ 294 (414)
+|+.++.+ ++|+|-+.....+.++.+.|-.+=+..+ .....|.++++.+.++-|+..+..|+.....+ .....+
T Consensus 140 vFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~~~~~ls~~GvifGVlaSl~vAlnaiytkk~l~~v~-~~iw~l 218 (347)
T KOG1442|consen 140 VFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEGSTGTLSWIGVIFGVLASLAVALNAIYTKKVLPPVG-DCIWRL 218 (347)
T ss_pred hHHHHhHHhhcccccccccceeehhheehheeccccccccCccchhhhHHHHHHHHHHHHHHHhhheeccccc-Ceehhh
Confidence 99999998 7999999999998888888877755443 22479999999999999999999998765544 345677
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCCCCCCCcchhhhhccccchhhHHHHHHHHHHHHHHHHHHHHHHhccCChhHHHHH
Q 015064 295 LGYEICVVALLSTIWVLVGGWFDSSQDFDQSPWTWTMLWDWMVTFPWVPALYTGIFSTGICLWIEIAAMRDVSATETAII 374 (414)
Q Consensus 295 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ll~lgv~~~~~~~~l~~~al~~~~a~~~s~~ 374 (414)
++|+.+.+.++.+|...+.+........+.. + +.++|..+...|+++..++|. -..=+|.++|....+-
T Consensus 219 t~ynnv~a~lLflpll~lnge~~~v~~~~~l-------~---a~~Fw~~mtLsglfgF~mgyv-Tg~QIK~TSplThnIS 287 (347)
T KOG1442|consen 219 TAYNNVNALLLFLPLLILNGEFQAVVGFPHL-------P---AIKFWILMTLSGLFGFAMGYV-TGWQIKVTSPLTHNIS 287 (347)
T ss_pred HHHHHHHHHHHHHHHHHHcchHHHHcCcccc-------h---HHHHHHHHHHHHHHHHHhhhe-eeEEEEecccceeeec
Confidence 8889999999999988887655443322111 1 134588888888888777773 3445777888777666
Q ss_pred hhhHHHHHHHHHHHHhcCCCchhhHHHHHHHHHhhhc
Q 015064 375 YGLEPLWGAGFAWFLLGERWSTAGWIGAALVLDVQIF 411 (414)
Q Consensus 375 ~~l~pv~a~l~~~~~lge~~s~~~~iG~~LIi~g~~l 411 (414)
..-.-..-.+++..+.+|.-+...|-|-.+|++|...
T Consensus 288 gTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~ 324 (347)
T KOG1442|consen 288 GTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLA 324 (347)
T ss_pred HhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHH
Confidence 6666777788888999999999999988888877654
No 52
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=98.44 E-value=2.7e-06 Score=82.75 Aligned_cols=130 Identities=17% Similarity=0.093 Sum_probs=102.4
Q ss_pred hHHHHHHHHHHHHHhhhHHHHHHhhh--cCCHHHHHHHHHHHHHHHHHHHHHHhcCcc--h-hh-------h--HHH---
Q 015064 124 IRSIFLLNVITIVYASDIPILKAAEE--IMHPASFCAVRFVMSAIPFLPFVFWARDDV--K-TR-------N--AGI--- 186 (414)
Q Consensus 124 ~~g~l~~lla~~~wg~~~~~~k~~~~--~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~--~-~~-------~--~~~--- 186 (414)
..|.++.+++++.|+...+..|...+ +.+|..+.++-+..+.+.++|+........ . .. . ...
T Consensus 144 ~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (302)
T TIGR00817 144 WAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVS 223 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHH
Confidence 56999999999999999999998887 799999999999999988888866432111 0 00 0 011
Q ss_pred -HHHH-HHHHHHHHHHHHHhhcchhHHHHHHhhHHHHHHHHHH-HhcccCchhHHHHHHHHHHhhhhhcc
Q 015064 187 -ELGL-WVSLGYFVEALGLLTSDAGRASFISLFTVIVVPLFDG-MLGAIIPAHTWFGVLISALGVGMLEC 253 (414)
Q Consensus 187 -~~gl-~~~~~~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~-~l~er~~~~~~~gi~l~~~Gv~li~~ 253 (414)
..+. .....+.+++++++++++..++++..+.|+++.++++ +++|+++..+++|.++.+.|+.+...
T Consensus 224 ~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~ 293 (302)
T TIGR00817 224 LVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSR 293 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHH
Confidence 1111 1122235667899999999999999999999999998 79999999999999999999988764
No 53
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.38 E-value=2.8e-06 Score=70.30 Aligned_cols=71 Identities=25% Similarity=0.544 Sum_probs=64.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCChhHHHHHhhhHHHHHHHHHHHHhcCCCchhhHHHHHHHHHhhhcc
Q 015064 341 WVPALYTGIFSTGICLWIEIAAMRDVSATETAIIYGLEPLWGAGFAWFLLGERWSTAGWIGAALVLDVQIFL 412 (414)
Q Consensus 341 ~~~ll~lgv~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~~~lge~~s~~~~iG~~LIi~g~~l~ 412 (414)
|...+..|+++..+++.++.+++++.++ .++++..+.|+++.++++++++|+++..+++|.+++++|+++.
T Consensus 34 ~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li 104 (113)
T PF13536_consen 34 WLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILI 104 (113)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence 5566677887777899999999999995 8889999999999999999999999999999999999999864
No 54
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=98.38 E-value=8.1e-06 Score=75.78 Aligned_cols=61 Identities=15% Similarity=0.051 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHHhccCChhHHHHHhhhHHHHHHHHHHHHhcCCCchhhHHHHHHHHHhhhc
Q 015064 351 STGICLWIEIAAMRDVSATETAIIYGLEPLWGAGFAWFLLGERWSTAGWIGAALVLDVQIF 411 (414)
Q Consensus 351 ~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~~~lge~~s~~~~iG~~LIi~g~~l 411 (414)
...++..+....+|+.++...+....++++++.+++++++||+++..+++|+.+++.|+.+
T Consensus 161 ~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l 221 (222)
T TIGR00803 161 LNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL 221 (222)
T ss_pred HHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence 3455666788899999999999999999999999999999999999999999999998764
No 55
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.36 E-value=1.3e-05 Score=66.22 Aligned_cols=62 Identities=19% Similarity=0.214 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHhhcchhHHHHHHhhHHHHHHHHHH-HhcccCchhHHHHHHHHHHhhhhhcc
Q 015064 192 VSLGYFVEALGLLTSDAGRASFISLFTVIVVPLFDG-MLGAIIPAHTWFGVLISALGVGMLEC 253 (414)
Q Consensus 192 ~~~~~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~-~l~er~~~~~~~gi~l~~~Gv~li~~ 253 (414)
...++.++.+++++.|.+.+..+..+.++++.++++ ++|||++.++++|+.+.+.|++++..
T Consensus 47 ~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~~ 109 (111)
T PRK15051 47 LGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGS 109 (111)
T ss_pred HHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 467889999999999999999988999999999998 79999999999999999999988764
No 56
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=98.31 E-value=7.9e-06 Score=79.13 Aligned_cols=126 Identities=20% Similarity=0.181 Sum_probs=98.0
Q ss_pred hHHHHHHHHHHHHHhhhHHHHHHhhhcCCHHHHHHHHHH---HHHHHHHHHHHHhcCcch--hhhHHHHHHHHHHHHHHH
Q 015064 124 IRSIFLLNVITIVYASDIPILKAAEEIMHPASFCAVRFV---MSAIPFLPFVFWARDDVK--TRNAGIELGLWVSLGYFV 198 (414)
Q Consensus 124 ~~g~l~~lla~~~wg~~~~~~k~~~~~~~p~~~~~~R~~---~a~l~ll~~~~~~~~~~~--~~~~~~~~gl~~~~~~~~ 198 (414)
.+|+++.+++++.++......|.. +.+|....+.... ++++++.+... +.++.. .....+..|+....++.+
T Consensus 151 ~~Gi~~~l~sg~~y~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Gi~~~ia~~~ 227 (290)
T TIGR00776 151 KKGILLLLMSTIGYLVYVVVAKAF--GVDGLSVLLPQAIGMVIGGIIFNLGHI-LAKPLKKYAILLNILPGLMWGIGNFF 227 (290)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHc--CCCcceehhHHHHHHHHHHHHHHHHHh-cccchHHHHHHHHHHHHHHHHHHHHH
Confidence 469999999999999999999976 3788888555444 33333332221 112211 222344468877888999
Q ss_pred HHHHHh-hcchhHHHHHHhhHHHHHHHHHH-HhcccCchhHH----HHHHHHHHhhhhhc
Q 015064 199 EALGLL-TSDAGRASFISLFTVIVVPLFDG-MLGAIIPAHTW----FGVLISALGVGMLE 252 (414)
Q Consensus 199 ~~~al~-~~~~~~a~~l~~~~Pl~~~ll~~-~l~er~~~~~~----~gi~l~~~Gv~li~ 252 (414)
|+.+++ +.+++.+.++....|+...+.+. ++||+.+++++ +|.++.+.|+.++.
T Consensus 228 y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~ 287 (290)
T TIGR00776 228 YLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILG 287 (290)
T ss_pred HHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHh
Confidence 999999 99999999999999999999998 69999999999 99999999998865
No 57
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=98.27 E-value=4.4e-05 Score=72.86 Aligned_cols=130 Identities=16% Similarity=0.281 Sum_probs=99.7
Q ss_pred hHHHHHHHHHHHHHhhhHHHHHHhhhcCCHHHHHH-HHHHHHHHHHHHHHHHhcC---cchhhhHHHHHHHHHH-HHHHH
Q 015064 124 IRSIFLLNVITIVYASDIPILKAAEEIMHPASFCA-VRFVMSAIPFLPFVFWARD---DVKTRNAGIELGLWVS-LGYFV 198 (414)
Q Consensus 124 ~~g~l~~lla~~~wg~~~~~~k~~~~~~~p~~~~~-~R~~~a~l~ll~~~~~~~~---~~~~~~~~~~~gl~~~-~~~~~ 198 (414)
..|.++.+++++.|+...+..|... +.++..... +.+........+....... ....+......|+... .++.+
T Consensus 153 ~~g~~~~l~a~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~ 231 (292)
T COG0697 153 LLGLLLALAAALLWALYTALVKRLS-RLGPVTLALLLQLLLALLLLLLFFLSGFGAPILSRAWLLLLYLGVFSTGLAYLL 231 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHHhccccccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 5799999999999999999999777 567776666 4444222333233222221 2233444555576655 68999
Q ss_pred HHHHHhhcchhHHHHHHhhHHHHHHHHHH-HhcccCchhHHHHHHHHHHhhhhhccc
Q 015064 199 EALGLLTSDAGRASFISLFTVIVVPLFDG-MLGAIIPAHTWFGVLISALGVGMLECS 254 (414)
Q Consensus 199 ~~~al~~~~~~~a~~l~~~~Pl~~~ll~~-~l~er~~~~~~~gi~l~~~Gv~li~~~ 254 (414)
+++++++.+++.++.+..+.|++..++++ +++|+++..+++|..+.+.|+.+....
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~ 288 (292)
T COG0697 232 WYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR 288 (292)
T ss_pred HHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999898 699999999999999999999887644
No 58
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=98.23 E-value=5.9e-05 Score=65.41 Aligned_cols=125 Identities=18% Similarity=0.159 Sum_probs=102.7
Q ss_pred HHHHHHHHHHHHhhhHHHHHHhhh-------cCCHHHHHHHHHHHHHHHHHHHHHHhcCcc-----------------hh
Q 015064 126 SIFLLNVITIVYASDIPILKAAEE-------IMHPASFCAVRFVMSAIPFLPFVFWARDDV-----------------KT 181 (414)
Q Consensus 126 g~l~~lla~~~wg~~~~~~k~~~~-------~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~-----------------~~ 181 (414)
|.++++.+.++-+...+..|...+ +.++.+...+-...+.+++++......... +.
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 467888999999999999987654 378999999999999999988766532211 11
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHhhHHHHHHHHHH-HhcccCchhHHHHHHHHHHhhhh
Q 015064 182 RNAGIELGLWVSLGYFVEALGLLTSDAGRASFISLFTVIVVPLFDG-MLGAIIPAHTWFGVLISALGVGM 250 (414)
Q Consensus 182 ~~~~~~~gl~~~~~~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~-~l~er~~~~~~~gi~l~~~Gv~l 250 (414)
....+..|++.+..+...+..++++++...+++...-.+++.+++. +++|+++..+++|+++++.|+++
T Consensus 81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~ 150 (153)
T PF03151_consen 81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLL 150 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhe
Confidence 1122334666778889999999999999999999999999999998 79999999999999999999875
No 59
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=98.23 E-value=4.2e-05 Score=76.09 Aligned_cols=129 Identities=12% Similarity=0.132 Sum_probs=96.9
Q ss_pred hHHHHHHHHHHHHHhhhHHHHHHhhhc-------CCHHHHHHHHHHHHHHHHHHHHHHhcC-c-c----------hhh--
Q 015064 124 IRSIFLLNVITIVYASDIPILKAAEEI-------MHPASFCAVRFVMSAIPFLPFVFWARD-D-V----------KTR-- 182 (414)
Q Consensus 124 ~~g~l~~lla~~~wg~~~~~~k~~~~~-------~~p~~~~~~R~~~a~l~ll~~~~~~~~-~-~----------~~~-- 182 (414)
..|.++++++++.|+...+..|...++ .++.....+-..+++++++|+...... . . ...
T Consensus 193 ~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~ 272 (350)
T PTZ00343 193 WLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTK 272 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccch
Confidence 569999999999999999999988764 557667666678888888887653211 0 0 000
Q ss_pred hHHHHH----HHHHHHHHHHHHHHHhhcchhHHHHHHhhHHHHHHHHHH-HhcccCchhHHHHHHHHHHhhhhhc
Q 015064 183 NAGIEL----GLWVSLGYFVEALGLLTSDAGRASFISLFTVIVVPLFDG-MLGAIIPAHTWFGVLISALGVGMLE 252 (414)
Q Consensus 183 ~~~~~~----gl~~~~~~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~-~l~er~~~~~~~gi~l~~~Gv~li~ 252 (414)
...+.. +++.+..+.+.|++++++++..+++...+.|+++.++++ +++|+++..+++|.++++.|+.+..
T Consensus 273 ~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs 347 (350)
T PTZ00343 273 GIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYS 347 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHh
Confidence 111111 222233334445799999999999999999999999998 7999999999999999999998754
No 60
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=98.22 E-value=9.3e-05 Score=68.87 Aligned_cols=244 Identities=11% Similarity=0.001 Sum_probs=166.5
Q ss_pred HHHHHHHHHHHHHHHHHHHH--hcCcchhhhHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHhhHHHHHHHHHH-Hhcc
Q 015064 155 SFCAVRFVMSAIPFLPFVFW--ARDDVKTRNAGIELGLWVSLGYFVEALGLLTSDAGRASFISLFTVIVVPLFDG-MLGA 231 (414)
Q Consensus 155 ~~~~~R~~~a~l~ll~~~~~--~~~~~~~~~~~~~~gl~~~~~~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~-~l~e 231 (414)
.+++.++++-..+.+..+.. .+++...++-+..++.+......+..-++.|++--.-.+.-.+--+=+.+.+. +=|.
T Consensus 77 ylTlvQf~~Ysg~glie~~~~~~k~r~iP~rtY~~la~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGk 156 (367)
T KOG1582|consen 77 YLTLVQFLVYSGFGLIELQLIQTKRRVIPWRTYVILAFLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGK 156 (367)
T ss_pred HHHHHHHHHHHhhhheEEEeecccceecchhHhhhhHhhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccc
Confidence 44555554433333322211 23334456666666666666666667777777755555555555555556666 4688
Q ss_pred cCchhHHHHHHHHHHhhhhhcccCCC-----CchhhHHHHHHHHHHHHHHHHHhHhhhccCCCCchhHHHHHHHHHHHHH
Q 015064 232 IIPAHTWFGVLISALGVGMLECSGSP-----PSVGDFLNFLSAIFFGIHMLRTERISRSTKKENFLPLLGYEICVVALLS 306 (414)
Q Consensus 232 r~~~~~~~gi~l~~~Gv~li~~~~~~-----~~~G~llal~aa~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 306 (414)
|.+..+..+..+..+|+++....|+. ...|+.+.-+|-++=|.---+.++.-+..+ .+...+.++...++.+..
T Consensus 157 RY~v~d~~aA~lm~lGli~FTLADs~~sPNF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~-~ss~EmvfySy~iG~vfl 235 (367)
T KOG1582|consen 157 RYGVHDYIAAMLMSLGLIWFTLADSQTSPNFNLIGVMMISGALLADAVIGNVQEKAMKMNP-ASSSEMVFYSYGIGFVFL 235 (367)
T ss_pred cccHHHHHHHHHHHHHHHhhhhcccccCCCcceeeHHHHHHHHHHHHHhhHHHHHHHhhCC-CCcceEEEeeecccHHHH
Confidence 99999999999999999998875532 357888877777777777777777766655 455778888888888888
Q ss_pred HHHHHHhccCCC-CCCCCCCcchhhhhccccchhhHHHHHHHHHHHHHHHHHHHHHHhccCChhHHHHHhhhHHHHHHHH
Q 015064 307 TIWVLVGGWFDS-SQDFDQSPWTWTMLWDWMVTFPWVPALYTGIFSTGICLWIEIAAMRDVSATETAIIYGLEPLWGAGF 385 (414)
Q Consensus 307 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~w~~~~~~~~ll~lgv~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~ 385 (414)
+..+...+.... ...-...++ +.+......+. .+.++...-..-++..++..++.+....--+++++
T Consensus 236 f~~mvlTge~f~a~~fcaehp~-----------~tyGy~~~~s~-~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~l 303 (367)
T KOG1582|consen 236 FAPMVLTGELFSAWTFCAEHPV-----------RTYGYAFLFSL-AGYLGIVFVLALIKLFGALIAATVTTARKAVTILL 303 (367)
T ss_pred HHHHHhcccchhhhHHHHhCcH-----------hHHHHHHHHHH-HhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHH
Confidence 777666553321 111111121 11333443333 34556666667788999999999999999999999
Q ss_pred HHHHhcCCCchhhHHHHHHHHHhhhc
Q 015064 386 AWFLLGERWSTAGWIGAALVLDVQIF 411 (414)
Q Consensus 386 ~~~~lge~~s~~~~iG~~LIi~g~~l 411 (414)
++++|..+++....-|+.+|+.|+++
T Consensus 304 SfllFsKPfT~qy~~~gllv~lgI~L 329 (367)
T KOG1582|consen 304 SFLLFSKPFTEQYVWSGLLVVLGIYL 329 (367)
T ss_pred HHHHHcCchHHHHhhhhHHHHHHHHh
Confidence 99999999999999999999999986
No 61
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.17 E-value=7.2e-05 Score=63.32 Aligned_cols=119 Identities=15% Similarity=0.013 Sum_probs=88.6
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHhcCcchhhhHHHHHHHH-HHHHHHHHHHHH
Q 015064 125 RSIFLLNVITIVYASDIPILKAAEEIMHPASFCAVRFVMSAIPFLPFVFWARDDVKTRNAGIELGLW-VSLGYFVEALGL 203 (414)
Q Consensus 125 ~g~l~~lla~~~wg~~~~~~k~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~gl~-~~~~~~~~~~al 203 (414)
.++++++++.++-+..-++.|...++.+..+..... ...+.. .......+..|+. ...++.++.+++
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~~~~~~~~--~~~~~~----------~~~p~~~i~lgl~~~~la~~~w~~aL 69 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMSRLPLLSHAWDF--IAALLA----------FGLALRAVLLGLAGYALSMLCWLKAL 69 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhCCCccchhHH--HHHHHH----------HhccHHHHHHHHHHHHHHHHHHHHHH
Confidence 367888888888888899999988776544422211 000000 0111124555554 568889999999
Q ss_pred hhcchhHHHHHHhhHHHHHHHHHH---HhcccCchhHHHHHHHHHHhhhhhcccC
Q 015064 204 LTSDAGRASFISLFTVIVVPLFDG---MLGAIIPAHTWFGVLISALGVGMLECSG 255 (414)
Q Consensus 204 ~~~~~~~a~~l~~~~Pl~~~ll~~---~l~er~~~~~~~gi~l~~~Gv~li~~~~ 255 (414)
++.|++.+..+....+.++.+.++ ++||+++..+++|+++.++|++++..++
T Consensus 70 ~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~ 124 (129)
T PRK02971 70 RYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPT 124 (129)
T ss_pred HhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCC
Confidence 999999999999999888888886 5899999999999999999999987653
No 62
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=98.00 E-value=7.4e-05 Score=70.53 Aligned_cols=136 Identities=16% Similarity=0.219 Sum_probs=108.0
Q ss_pred chhhHHHHHHHHHHHHHHHHHhHhhhccCCCCchhHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCcchhhhhccccch
Q 015064 259 SVGDFLNFLSAIFFGIHMLRTERISRSTKKENFLPLLGYEICVVALLSTIWVLVGGWFDSSQDFDQSPWTWTMLWDWMVT 338 (414)
Q Consensus 259 ~~G~llal~aa~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~ 338 (414)
..|.++++.|-+.|+....+.|-+.. .++..+..++.+.+...............+..+. +-+|
T Consensus 6 ~~Gil~~l~Ay~lwG~lp~y~kll~~----~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~------------~~~p 69 (293)
T COG2962 6 RKGILLALLAYLLWGLLPLYFKLLEP----LPATEILAHRVIWSFPFMLALLFLLRQWRELKQL------------LKQP 69 (293)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHcc----CCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH------------HhCc
Confidence 57999999999999999998887654 5678889999888888776665555432222111 1224
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhccCChhHHHHHhhhHHHHHHHHHHHHhcCCCchhhHHHHHHHHHhhhc
Q 015064 339 FPWVPALYTGIFSTGICLWIEIAAMRDVSATETAIIYGLEPLWGAGFAWFLLGERWSTAGWIGAALVLDVQIF 411 (414)
Q Consensus 339 ~~~~~ll~lgv~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~~~lge~~s~~~~iG~~LIi~g~~l 411 (414)
+.+...+..++. .......+.+|.++.....+|.--+++|++.+++|.++++|+++..|++..++-.+|+..
T Consensus 70 ~~~~~~~l~a~l-i~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~ 141 (293)
T COG2962 70 KTLLMLALTALL-IGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLI 141 (293)
T ss_pred HHHHHHHHHHHH-HHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHH
Confidence 556666665555 355888999999999999999999999999999999999999999999999999988864
No 63
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=97.89 E-value=0.0003 Score=65.05 Aligned_cols=127 Identities=15% Similarity=0.108 Sum_probs=104.8
Q ss_pred hHHHHHHHHHHHHHhhhHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHhcCcc----hhhhHHHHHHHHH-HHHHHH
Q 015064 124 IRSIFLLNVITIVYASDIPILKAAEEIMHPASFCAVRFVMSAIPFLPFVFWARDDV----KTRNAGIELGLWV-SLGYFV 198 (414)
Q Consensus 124 ~~g~l~~lla~~~wg~~~~~~k~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~----~~~~~~~~~gl~~-~~~~~~ 198 (414)
..|..+.+.+..+|+..-+..|.+-+..+...-+..-+.+++++.+|+-.-...+- ......+..|++. .+.|.+
T Consensus 147 p~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~g~~g~a~gm~vAaviv~Pig~~~ag~~l~~p~ll~laLgvavlSSalPYsL 226 (292)
T COG5006 147 PVGVALALGAGACWALYIVLGQRAGRAEHGTAGVAVGMLVAALIVLPIGAAQAGPALFSPSLLPLALGVAVLSSALPYSL 226 (292)
T ss_pred HHHHHHHHHHhHHHHHHHHHcchhcccCCCchHHHHHHHHHHHHHhhhhhhhcchhhcChHHHHHHHHHHHHhcccchHH
Confidence 57899999999999999999998887778888889999999999999876554332 2222233334443 477789
Q ss_pred HHHHHhhcchhHHHHHHhhHHHHHHHHHH-HhcccCchhHHHHHHHHHHhhhh
Q 015064 199 EALGLLTSDAGRASFISLFTVIVVPLFDG-MLGAIIPAHTWFGVLISALGVGM 250 (414)
Q Consensus 199 ~~~al~~~~~~~a~~l~~~~Pl~~~ll~~-~l~er~~~~~~~gi~l~~~Gv~l 250 (414)
...++++.|...-+++.++.|.+.++.++ +++|+++..||+|+...+.+..=
T Consensus 227 EmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG 279 (292)
T COG5006 227 EMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAG 279 (292)
T ss_pred HHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999 79999999999999887776653
No 64
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=97.66 E-value=8.6e-06 Score=74.68 Aligned_cols=259 Identities=12% Similarity=0.080 Sum_probs=173.0
Q ss_pred HHHHHHHHHHHHhhhHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHhcCc--chhhhHHHHHHHHHHHHHHHHHHHH
Q 015064 126 SIFLLNVITIVYASDIPILKAAEEIMHPASFCAVRFVMSAIPFLPFVFWARDD--VKTRNAGIELGLWVSLGYFVEALGL 203 (414)
Q Consensus 126 g~l~~lla~~~wg~~~~~~k~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~--~~~~~~~~~~gl~~~~~~~~~~~al 203 (414)
.++.+++-++.||+........- =+|.+....-.+-+.++.+.+++..++. .+.....++.|.+..++....+.|.
T Consensus 3 ~~liaL~P~l~WGsip~v~~k~G--G~p~qQ~lGtT~GALifaiiv~~~~~p~~T~~~~iv~~isG~~Ws~GQ~~Qfka~ 80 (288)
T COG4975 3 DLLIALLPALGWGSIPLVANKFG--GKPYQQTLGTTLGALIFAIIVFLFVSPELTLTIFIVGFISGAFWSFGQANQFKAI 80 (288)
T ss_pred hHHHHHHHHHHhcccceeeeecC--CChhHhhhhccHHHHHHHHHHheeecCccchhhHHHHHHhhhHhhhhhhhhhhhe
Confidence 47888999999999887654322 3576666655555555555444443332 2334455666888889999999999
Q ss_pred hhcchhHHHHHHh-hHHHHHHHHHH-HhcccCchhH----HHHHHHHHHhhhhhcccCC---------CCchhhHHHHHH
Q 015064 204 LTSDAGRASFISL-FTVIVVPLFDG-MLGAIIPAHT----WFGVLISALGVGMLECSGS---------PPSVGDFLNFLS 268 (414)
Q Consensus 204 ~~~~~~~a~~l~~-~~Pl~~~ll~~-~l~er~~~~~----~~gi~l~~~Gv~li~~~~~---------~~~~G~llal~a 268 (414)
++.+++.+..+.. .+-+-+.+++. .++|-.+..+ .+++++.+.|+.+-...+. ....|....+.+
T Consensus 81 ~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~nk~~~~~~n~kkgi~~L~iS 160 (288)
T COG4975 81 QLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNNKEEENPSNLKKGIVILLIS 160 (288)
T ss_pred eeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeeccccccccChHhhhhheeeeeee
Confidence 9999999877764 55555666777 5898777643 5677788888888776532 135788888889
Q ss_pred HHHHHHHHHHHhHhhhccCCCCchhHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCcchhhhhccccchhhHHHHHHHH
Q 015064 269 AIFFGIHMLRTERISRSTKKENFLPLLGYEICVVALLSTIWVLVGGWFDSSQDFDQSPWTWTMLWDWMVTFPWVPALYTG 348 (414)
Q Consensus 269 a~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ll~lg 348 (414)
.+.|-+|.+..+... .++.+...-....+.+++++. -.... +.. .+ +.-+.-+..|
T Consensus 161 t~GYv~yvvl~~~f~--v~g~saiLPqAiGMv~~ali~----~~~~~--~~~-~~---------------K~t~~nii~G 216 (288)
T COG4975 161 TLGYVGYVVLFQLFD--VDGLSAILPQAIGMVIGALIL----GFFKM--EKR-FN---------------KYTWLNIIPG 216 (288)
T ss_pred ccceeeeEeeecccc--ccchhhhhHHHHHHHHHHHHH----hhccc--ccc-hH---------------HHHHHHHhhH
Confidence 999999999887654 223333333222222222221 11110 111 11 1122234455
Q ss_pred HHHHHHHHHHHHHHhccCChhHHHHHhhhHHHHHHHHHHHHhcCCCchhhH----HHHHHHHHhhhc
Q 015064 349 IFSTGICLWIEIAAMRDVSATETAIIYGLEPLWGAGFAWFLLGERWSTAGW----IGAALVLDVQIF 411 (414)
Q Consensus 349 v~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~~~lge~~s~~~~----iG~~LIi~g~~l 411 (414)
+.- +++...+..+-++.+....=.++-+..+.+.+-|.++++|+=|..++ +|..++++|.++
T Consensus 217 ~~W-a~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~ 282 (288)
T COG4975 217 LIW-AIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAIL 282 (288)
T ss_pred HHH-HhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhh
Confidence 543 55788888999999998888888899999999999999999988765 688888877654
No 65
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.63 E-value=0.00089 Score=55.79 Aligned_cols=67 Identities=12% Similarity=0.125 Sum_probs=59.4
Q ss_pred HHHHHHHHHHHHHHHHhccCChhHHHHH-hhhHHHHHHHHHHHHhcCCCchhhHHHHHHHHHhhhccc
Q 015064 347 TGIFSTGICLWIEIAAMRDVSATETAII-YGLEPLWGAGFAWFLLGERWSTAGWIGAALVLDVQIFLP 413 (414)
Q Consensus 347 lgv~~~~~~~~l~~~al~~~~a~~~s~~-~~l~pv~a~l~~~~~lge~~s~~~~iG~~LIi~g~~l~~ 413 (414)
+.++..++++.++.+++|+.+.+.+=.+ ..+..+.+.+.+++++||++++.+++|..+|++|++..+
T Consensus 35 ~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~ 102 (120)
T PRK10452 35 LMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIK 102 (120)
T ss_pred HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhh
Confidence 4556678899999999999999998776 468999999999999999999999999999999998653
No 66
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.53 E-value=0.00064 Score=55.83 Aligned_cols=66 Identities=15% Similarity=0.273 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHHHHHhccCChhHHHHH-hhhHHHHHHHHHHHHhcCCCchhhHHHHHHHHHhhhcc
Q 015064 347 TGIFSTGICLWIEIAAMRDVSATETAII-YGLEPLWGAGFAWFLLGERWSTAGWIGAALVLDVQIFL 412 (414)
Q Consensus 347 lgv~~~~~~~~l~~~al~~~~a~~~s~~-~~l~pv~a~l~~~~~lge~~s~~~~iG~~LIi~g~~l~ 412 (414)
..+++.++++.++..++|+.+.+.+=.+ .-+..+...+.++++|||++++.+++|.++|++|++..
T Consensus 35 ~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l 101 (110)
T PRK09541 35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVI 101 (110)
T ss_pred HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHH
Confidence 4566678899999999999999998666 66889999999999999999999999999999998864
No 67
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.51 E-value=0.0024 Score=52.26 Aligned_cols=64 Identities=20% Similarity=0.378 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHHHhccCChhHH-HHHhhhHHHHHHHHHHHHhcCCCchhhHHHHHHHHHhhhcc
Q 015064 349 IFSTGICLWIEIAAMRDVSATET-AIIYGLEPLWGAGFAWFLLGERWSTAGWIGAALVLDVQIFL 412 (414)
Q Consensus 349 v~~~~~~~~l~~~al~~~~a~~~-s~~~~l~pv~a~l~~~~~lge~~s~~~~iG~~LIi~g~~l~ 412 (414)
+++..+++.+...++|+.+.+.+ ++..-+..+.+.+.+++++||++++.+++|..+|++|++..
T Consensus 42 ~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l 106 (109)
T PRK10650 42 LAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence 45567789999999999999887 45556888888999999999999999999999999999864
No 68
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.51 E-value=0.00041 Score=66.37 Aligned_cols=260 Identities=12% Similarity=0.067 Sum_probs=154.1
Q ss_pred ccchHHHHHHHHHHHHHhhhHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHhcCcch-hhhHHHHHHHH-HHHHHHH
Q 015064 121 SKKIRSIFLLNVITIVYASDIPILKAAEEIMHPASFCAVRFVMSAIPFLPFVFWARDDVK-TRNAGIELGLW-VSLGYFV 198 (414)
Q Consensus 121 ~~~~~g~l~~lla~~~wg~~~~~~k~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~-~~~~~~~~gl~-~~~~~~~ 198 (414)
.+...|..+.+.+.++.|.++.+-|....+... ...| ......+ ...+.+..|++ +.++-.+
T Consensus 17 ~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~---~~~r-------------a~~gg~~yl~~~~Ww~G~ltm~vGei~ 80 (335)
T KOG2922|consen 17 SDNIIGLVLAISSSIFIGSSFILKKKGLKRAGA---SGLR-------------AGEGGYGYLKEPLWWAGMLTMIVGEIA 80 (335)
T ss_pred cCceeeeeehhhccEEEeeehhhhHHHHHHHhh---hccc-------------ccCCCcchhhhHHHHHHHHHHHHHhHh
Confidence 345678899999999999999999876653221 1111 0111111 12244555655 5688888
Q ss_pred HHHHHhhcchhHHHHHHhhHHHHHHHHHH-HhcccCchhHHHHHHHHHHhhhhhcccC--CCC------------chhhH
Q 015064 199 EALGLLTSDAGRASFISLFTVIVVPLFDG-MLGAIIPAHTWFGVLISALGVGMLECSG--SPP------------SVGDF 263 (414)
Q Consensus 199 ~~~al~~~~~~~a~~l~~~~Pl~~~ll~~-~l~er~~~~~~~gi~l~~~Gv~li~~~~--~~~------------~~G~l 263 (414)
-|.|+.+.|++..+.+..++-++.++++. +++||++....+|.+++++|-.+++... ... ..+.+
T Consensus 81 NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i~t~~el~~~~~~~~Fl 160 (335)
T KOG2922|consen 81 NFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQEIESVEEVWELATEPGFL 160 (335)
T ss_pred hHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcccccccHHHHHHHhcCccHH
Confidence 99999999999999999999999999998 8999999999999999999999988532 110 12211
Q ss_pred HHHHHHHHHHHHHHHHhHhhhccCCCCchhHHHHHHHHHHHHH-----HHHHHHhccCCCCCCCCCCcchhhhhccccch
Q 015064 264 LNFLSAIFFGIHMLRTERISRSTKKENFLPLLGYEICVVALLS-----TIWVLVGGWFDSSQDFDQSPWTWTMLWDWMVT 338 (414)
Q Consensus 264 lal~aa~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~ 338 (414)
. -.++.-.+..+..-....++...+++.....-.+.++.-. +-.++-.......+. .. |
T Consensus 161 i--y~~~iil~~~il~~~~~p~~g~tnilvyi~i~s~iGS~tV~svKalg~aiklt~~g~~ql---~~-----------~ 224 (335)
T KOG2922|consen 161 V--YVIIIILIVLILIFFYAPRYGQTNILVYIGICSLIGSLTVMSVKALGIAIKLTFSGNNQL---FY-----------P 224 (335)
T ss_pred H--HHHHHHHHHHHHheeecccccccceeehhhHhhhhcceeeeeHHHHHHHHHHHhcCCccc---cc-----------H
Confidence 1 1111111111111122222222344444332222221110 111111111111110 01 2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhccCChhHHHHHhhh-HHHHHHHHHHHHhcCCC--ch----hhHHHHHHHHHhhhc
Q 015064 339 FPWVPALYTGIFSTGICLWIEIAAMRDVSATETAIIYGL-EPLWGAGFAWFLLGERW--ST----AGWIGAALVLDVQIF 411 (414)
Q Consensus 339 ~~~~~ll~lgv~~~~~~~~l~~~al~~~~a~~~s~~~~l-~pv~a~l~~~~~lge~~--s~----~~~iG~~LIi~g~~l 411 (414)
..|..++.+.. +.+...--.++|++..+++.++++.|. -..++++-+.++|.|.- +. ..+.|...++.|+++
T Consensus 225 ~ty~~~l~~~~-~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~~~Gf~ti~~G~fl 303 (335)
T KOG2922|consen 225 LTWIFLLVVAT-CVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGELCGFVTIFLGIFL 303 (335)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhHHHhhheeeE
Confidence 23555554444 445566677899999999999888775 34555666788888753 33 345688888888876
Q ss_pred cc
Q 015064 412 LP 413 (414)
Q Consensus 412 ~~ 413 (414)
..
T Consensus 304 L~ 305 (335)
T KOG2922|consen 304 LH 305 (335)
T ss_pred ee
Confidence 54
No 69
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=97.45 E-value=0.00057 Score=56.09 Aligned_cols=109 Identities=17% Similarity=0.204 Sum_probs=76.2
Q ss_pred HHHHHHHhhhHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHhcCcchhhhHHHHHHHHHHHHHHHHHHHHhhcchhH
Q 015064 131 NVITIVYASDIPILKAAEEIMHPASFCAVRFVMSAIPFLPFVFWARDDVKTRNAGIELGLWVSLGYFVEALGLLTSDAGR 210 (414)
Q Consensus 131 lla~~~wg~~~~~~k~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~al~~~~~~~ 210 (414)
++.+++||...++.|...++.++..-.. +..-....+ ...++ +..--+++..+...|++.+...+.+.
T Consensus 2 l~Vg~~WG~Tnpfik~g~~~~~~~~~~~-~~~~~~~~L----------l~n~~-y~ipf~lNq~GSv~f~~~L~~~dlSl 69 (113)
T PF10639_consen 2 LLVGILWGCTNPFIKRGSSGLEKVKASL-QLLQEIKFL----------LLNPK-YIIPFLLNQSGSVLFFLLLGSADLSL 69 (113)
T ss_pred eeehHHhcCchHHHHHHHhhcCCccchH-HHHHHHHHH----------HHhHH-HHHHHHHHHHHHHHHHHHHhcCCcee
Confidence 3567899999999999887654433321 322111111 11222 22223456788899999999999999
Q ss_pred HHHHH-hhHHHHHHHHHHHhcccC-chhHHHHHHHHHHhhhhh
Q 015064 211 ASFIS-LFTVIVVPLFDGMLGAII-PAHTWFGVLISALGVGML 251 (414)
Q Consensus 211 a~~l~-~~~Pl~~~ll~~~l~er~-~~~~~~gi~l~~~Gv~li 251 (414)
+..+. ++.=+++.+.+++++|+. +++.++|.++.+.|+.+.
T Consensus 70 avPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 70 AVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC 112 (113)
T ss_pred eehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence 98885 778888888888766555 667899999999999875
No 70
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=97.42 E-value=0.0046 Score=60.78 Aligned_cols=71 Identities=11% Similarity=0.190 Sum_probs=63.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCChhHHHHHhhhHHHHHHHHHHHHhcCCCchhhHHHHHHHHHhhhcc
Q 015064 341 WVPALYTGIFSTGICLWIEIAAMRDVSATETAIIYGLEPLWGAGFAWFLLGERWSTAGWIGAALVLDVQIFL 412 (414)
Q Consensus 341 ~~~ll~lgv~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~~~lge~~s~~~~iG~~LIi~g~~l~ 412 (414)
|+..+.++++- +.+..+...|+++++.+.+.++.....++++++++++++++.++.+++|.++.++|+.+.
T Consensus 79 ~w~y~lla~~D-v~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv 149 (334)
T PF06027_consen 79 WWKYFLLALLD-VEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLV 149 (334)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhe
Confidence 55556677765 567889999999999999999999999999999999999999999999999999998754
No 71
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=97.42 E-value=0.0077 Score=51.64 Aligned_cols=124 Identities=12% Similarity=0.086 Sum_probs=96.2
Q ss_pred HHHHHHHHHHHhhhHHHHHHhhhcCC-HHHHHHHHHHHHHHHHHHHHHHhcCc-----chhhhHHHHHHHHHHHHHHHHH
Q 015064 127 IFLLNVITIVYASDIPILKAAEEIMH-PASFCAVRFVMSAIPFLPFVFWARDD-----VKTRNAGIELGLWVSLGYFVEA 200 (414)
Q Consensus 127 ~l~~lla~~~wg~~~~~~k~~~~~~~-p~~~~~~R~~~a~l~ll~~~~~~~~~-----~~~~~~~~~~gl~~~~~~~~~~ 200 (414)
.++.+++..+-+....+.-.+.+..+ |....++-+..+.+++..+....+++ ++.+++.+.-|+++.....+..
T Consensus 3 ~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w~~lGG~lG~~~V~~~~ 82 (138)
T PF04657_consen 3 ILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRPSLASLSSVPWWAYLGGLLGVFFVLSNI 82 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChHHhccHHHHHHHHHHHH
Confidence 46677788888888888877777776 99999999999999988777765542 1233445555778888888999
Q ss_pred HHHhhcchhHHHHHHhhHHHHHHHH-HHH--h---cccCchhHHHHHHHHHHhhhh
Q 015064 201 LGLLTSDAGRASFISLFTVIVVPLF-DGM--L---GAIIPAHTWFGVLISALGVGM 250 (414)
Q Consensus 201 ~al~~~~~~~a~~l~~~~Pl~~~ll-~~~--l---~er~~~~~~~gi~l~~~Gv~l 250 (414)
+...+++++.+..+..+.-++..++ ..+ + ++++++.+.+|+.+.+.|+++
T Consensus 83 ~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 83 ILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 9999999999887777666655554 443 2 688999999999999999874
No 72
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=97.40 E-value=0.0083 Score=51.41 Aligned_cols=131 Identities=18% Similarity=0.181 Sum_probs=95.3
Q ss_pred hHHHHHHHHHHHHHHHHHhHhhhccCCCCchhHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCcchhhhhccccchhhH
Q 015064 262 DFLNFLSAIFFGIHMLRTERISRSTKKENFLPLLGYEICVVALLSTIWVLVGGWFDSSQDFDQSPWTWTMLWDWMVTFPW 341 (414)
Q Consensus 262 ~llal~aa~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~ 341 (414)
.++++.+++.-++...++.++.++.+ ++....+..+..+.+....+....... ........+ |
T Consensus 3 ~lla~~aG~~i~~q~~~N~~L~~~~g--s~~~as~i~~~~G~i~~~i~~~~~~~~-~~~~~~~~p--------------~ 65 (138)
T PF04657_consen 3 ILLALLAGALIALQAAFNGQLGKALG--SPLVASFISFGVGFILLLIILLITGRP-SLASLSSVP--------------W 65 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC--ccHHHHHHHHHHHHHHHHHHHHHhccc-ccchhccCC--------------h
Confidence 57889999999999999999998854 478888888888888887776666543 222221112 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCChhHHHHHhhh-HHHHHHHHHHH----HhcCCCchhhHHHHHHHHHhhhc
Q 015064 342 VPALYTGIFSTGICLWIEIAAMRDVSATETAIIYGL-EPLWGAGFAWF----LLGERWSTAGWIGAALVLDVQIF 411 (414)
Q Consensus 342 ~~ll~lgv~~~~~~~~l~~~al~~~~a~~~s~~~~l-~pv~a~l~~~~----~lge~~s~~~~iG~~LIi~g~~l 411 (414)
+. ++|.+..++...+....+++.+++........ +.+.+.++|.+ .-.+++++.+++|.+++++|+++
T Consensus 66 w~--~lGG~lG~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 66 WA--YLGGLLGVFFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HH--hccHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 33 33544556666688899999999887666544 56666778875 23467899999999999999874
No 73
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=97.39 E-value=0.0037 Score=59.31 Aligned_cols=126 Identities=18% Similarity=0.086 Sum_probs=89.8
Q ss_pred cchHHHHHHHHHHHHHhhhHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHH--hcCcchhhhHHHHHHHHHHHHHHHH
Q 015064 122 KKIRSIFLLNVITIVYASDIPILKAAEEIMHPASFCAVRFVMSAIPFLPFVFW--ARDDVKTRNAGIELGLWVSLGYFVE 199 (414)
Q Consensus 122 ~~~~g~l~~lla~~~wg~~~~~~k~~~~~~~p~~~~~~R~~~a~l~ll~~~~~--~~~~~~~~~~~~~~gl~~~~~~~~~ 199 (414)
+..++++.++++.+.+....++.|. .+++|....+-......+...++... +....+...+-+..|++...++.++
T Consensus 135 ~~~kgi~~Ll~stigy~~Y~~~~~~--~~~~~~~~~lPqaiGm~i~a~i~~~~~~~~~~~k~~~~nil~G~~w~ignl~~ 212 (269)
T PF06800_consen 135 NMKKGILALLISTIGYWIYSVIPKA--FHVSGWSAFLPQAIGMLIGAFIFNLFSKKPFFEKKSWKNILTGLIWGIGNLFY 212 (269)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHh--cCCChhHhHHHHHHHHHHHHHHHhhcccccccccchHHhhHHHHHHHHHHHHH
Confidence 3467899999999999888888887 34677766664433332322233221 2222333445677799999999999
Q ss_pred HHHHhhcchhHHHHHHhhHHHHHHHHHH-HhcccCchhHHH----HHHHHHHhhh
Q 015064 200 ALGLLTSDAGRASFISLFTVIVVPLFDG-MLGAIIPAHTWF----GVLISALGVG 249 (414)
Q Consensus 200 ~~al~~~~~~~a~~l~~~~Pl~~~ll~~-~l~er~~~~~~~----gi~l~~~Gv~ 249 (414)
+.|.+....+.+-.+..+..++..+-+. ++||+-+++++. |+++.++|.+
T Consensus 213 ~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~i 267 (269)
T PF06800_consen 213 LISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAI 267 (269)
T ss_pred HHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhh
Confidence 9999999999999999999999999998 699999987654 4444444443
No 74
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.36 E-value=0.0067 Score=49.69 Aligned_cols=71 Identities=15% Similarity=0.173 Sum_probs=59.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhcchhHH-HHHHhhHHHHHHHHHH-HhcccCchhHHHHHHHHHHhhhhh
Q 015064 181 TRNAGIELGLWVSLGYFVEALGLLTSDAGRA-SFISLFTVIVVPLFDG-MLGAIIPAHTWFGVLISALGVGML 251 (414)
Q Consensus 181 ~~~~~~~~gl~~~~~~~~~~~al~~~~~~~a-~~l~~~~Pl~~~ll~~-~l~er~~~~~~~gi~l~~~Gv~li 251 (414)
++.+....-+....+++++..+++++|.+.+ ++....--+.+.+++. ++||+++..+++|+.+.+.|++.+
T Consensus 34 ~~~~~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l 106 (109)
T PRK10650 34 RKIYGILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI 106 (109)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence 3334444455567888999999999999996 6677788888899998 699999999999999999999876
No 75
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.32 E-value=0.003 Score=51.11 Aligned_cols=73 Identities=18% Similarity=0.175 Sum_probs=61.5
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhcchhHH-HHHHhhHHHHHHHHHH-HhcccCchhHHHHHHHHHHhhhhhcc
Q 015064 181 TRNAGIELGLWVSLGYFVEALGLLTSDAGRA-SFISLFTVIVVPLFDG-MLGAIIPAHTWFGVLISALGVGMLEC 253 (414)
Q Consensus 181 ~~~~~~~~gl~~~~~~~~~~~al~~~~~~~a-~~l~~~~Pl~~~ll~~-~l~er~~~~~~~gi~l~~~Gv~li~~ 253 (414)
+..+.+..-+....++.++..|++++|.+.| ++-...-.+.+.+.++ ++||+++..+++++.+.++|++.+-.
T Consensus 29 ~~~~~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~ 103 (106)
T COG2076 29 RLWPSILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL 103 (106)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence 3444455555677888999999999999996 7778888899999998 79999999999999999999987643
No 76
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=97.32 E-value=0.0041 Score=58.34 Aligned_cols=245 Identities=13% Similarity=0.098 Sum_probs=147.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh--cCcchhhhHHHHHHHHHHHHHHHHHHHHhh-cchhHHHHHHhhHHHHHHHHHH-Hh
Q 015064 154 ASFCAVRFVMSAIPFLPFVFWA--RDDVKTRNAGIELGLWVSLGYFVEALGLLT-SDAGRASFISLFTVIVVPLFDG-ML 229 (414)
Q Consensus 154 ~~~~~~R~~~a~l~ll~~~~~~--~~~~~~~~~~~~~gl~~~~~~~~~~~al~~-~~~~~a~~l~~~~Pl~~~ll~~-~l 229 (414)
..++|..+++-+.--+++.-.- .+++-.++.+...-.+.+..+.+-++++++ +|...=-++..-.++.++++++ ++
T Consensus 34 NLITFaqFlFia~eGlif~skf~~~k~kiplk~Y~i~V~mFF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~ 113 (330)
T KOG1583|consen 34 NLITFAQFLFIATEGLIFTSKFFTVKPKIPLKDYAITVAMFFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMILGWILL 113 (330)
T ss_pred eehHHHHHHHHHHhceeeeccccccCCCCchhhhheehheeeeeeeeccceeeecccceEEEEEecCcHHHHHHHHHHhc
Confidence 4566666666555544443211 123333444444444445555677777774 4444444555667888999999 68
Q ss_pred cccCchhHHHHHHHHHHhhhhhcccCC----C----------------CchhhHHHHHHHHHHHHHHHHHhHhhhccCCC
Q 015064 230 GAIIPAHTWFGVLISALGVGMLECSGS----P----------------PSVGDFLNFLSAIFFGIHMLRTERISRSTKKE 289 (414)
Q Consensus 230 ~er~~~~~~~gi~l~~~Gv~li~~~~~----~----------------~~~G~llal~aa~~~al~~v~~~~~~~~~~~~ 289 (414)
|+|.+.+|+..+++.-+|+++.....+ . ...|..+...+-+.-|.-.++.++.-++++ .
T Consensus 114 ~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyG-K 192 (330)
T KOG1583|consen 114 GKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFALLLSAYMGIYQETTYQKYG-K 192 (330)
T ss_pred cceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-C
Confidence 999999999999999999999764211 0 136766666666666666666666555555 3
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHhccCCCCCCC-----CCCcchhhhhccccchhhHHHHHHHHHHHHHHHHHHHHHHh-
Q 015064 290 NFLPLLGYEICVVALLSTIWVLVGGWFDSSQDF-----DQSPWTWTMLWDWMVTFPWVPALYTGIFSTGICLWIEIAAM- 363 (414)
Q Consensus 290 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~w~~~~~~~~ll~lgv~~~~~~~~l~~~al- 363 (414)
++-+.++|.=.+.. |..++.+.. ..+. ...+...+ ..+-.-|..|..++.- .+.|..-.+++
T Consensus 193 h~~EalFytH~LsL----P~Flf~~~d--iv~~~~~~~~se~~~~p-~~g~~vP~~~~yLl~n-----~L~Qy~CikgVy 260 (330)
T KOG1583|consen 193 HWKEALFYTHFLSL----PLFLFMGDD--IVSHWRLAFKSESYLIP-LLGFKVPSMWVYLLFN-----VLTQYFCIKGVY 260 (330)
T ss_pred ChHHHHHHHHHhcc----chHHHhcch--HHHHHHHHhcCcceecc-ccCccccHHHHHHHHH-----HHHHHHHHHhhh
Confidence 56666666544433 332222110 0000 00000000 0111123445554432 22333334443
Q ss_pred ---ccCChhHHHHHhhhHHHHHHHHHHHHhcCCCchhhHHHHHHHHHhhhc
Q 015064 364 ---RDVSATETAIIYGLEPLWGAGFAWFLLGERWSTAGWIGAALVLDVQIF 411 (414)
Q Consensus 364 ---~~~~a~~~s~~~~l~pv~a~l~~~~~lge~~s~~~~iG~~LIi~g~~l 411 (414)
.+.++-.++++..+.-.++.+++.+.|+.+++++.|+|..++..|.++
T Consensus 261 ~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~ 311 (330)
T KOG1583|consen 261 ILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLL 311 (330)
T ss_pred hhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHH
Confidence 445666778888999999999999999999999999999999999865
No 77
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.31 E-value=0.0036 Score=50.92 Aligned_cols=72 Identities=11% Similarity=0.058 Sum_probs=59.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhcchhHH-HHHHhhHHHHHHHHHH-HhcccCchhHHHHHHHHHHhhhhhc
Q 015064 181 TRNAGIELGLWVSLGYFVEALGLLTSDAGRA-SFISLFTVIVVPLFDG-MLGAIIPAHTWFGVLISALGVGMLE 252 (414)
Q Consensus 181 ~~~~~~~~gl~~~~~~~~~~~al~~~~~~~a-~~l~~~~Pl~~~ll~~-~l~er~~~~~~~gi~l~~~Gv~li~ 252 (414)
++.+....-+....+++++..++++.|.+.+ ++-..+--+.+.+++. ++||+++..+++|+.+.+.|++.+-
T Consensus 28 ~~~~~~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~ 101 (105)
T PRK11431 28 RLTPSIITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK 101 (105)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence 3334444455567888999999999999996 6777788889999998 7999999999999999999998874
No 78
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.30 E-value=0.0033 Score=52.42 Aligned_cols=69 Identities=14% Similarity=0.250 Sum_probs=58.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhcchhHHH-HHHhhHHHHHHHHHH-HhcccCchhHHHHHHHHHHhhhhhccc
Q 015064 186 IELGLWVSLGYFVEALGLLTSDAGRAS-FISLFTVIVVPLFDG-MLGAIIPAHTWFGVLISALGVGMLECS 254 (414)
Q Consensus 186 ~~~gl~~~~~~~~~~~al~~~~~~~a~-~l~~~~Pl~~~ll~~-~l~er~~~~~~~gi~l~~~Gv~li~~~ 254 (414)
+..-++...+++++..++++.|.+.|= +...+.-+.+.+++. +++|+++..+++|+.+.++|++++-..
T Consensus 34 ~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~ 104 (120)
T PRK10452 34 ILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSG 104 (120)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcC
Confidence 334455678889999999999999974 445788889999998 799999999999999999999887543
No 79
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.29 E-value=0.0017 Score=52.88 Aligned_cols=64 Identities=23% Similarity=0.200 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHHHHhccCChhHH-HHHhhhHHHHHHHHHHHHhcCCCchhhHHHHHHHHHhhhcc
Q 015064 349 IFSTGICLWIEIAAMRDVSATET-AIIYGLEPLWGAGFAWFLLGERWSTAGWIGAALVLDVQIFL 412 (414)
Q Consensus 349 v~~~~~~~~l~~~al~~~~a~~~-s~~~~l~pv~a~l~~~~~lge~~s~~~~iG~~LIi~g~~l~ 412 (414)
+++.++++.++..++|+.+.+.+ ++..-+..+.+.+.+++++||++++.+++|..+|++|++..
T Consensus 36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l 100 (105)
T PRK11431 36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGL 100 (105)
T ss_pred HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhh
Confidence 55667889999999999999887 55556888999999999999999999999999999999864
No 80
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.29 E-value=0.0016 Score=52.57 Aligned_cols=65 Identities=26% Similarity=0.300 Sum_probs=57.0
Q ss_pred HHHHHHHHHHHHHHHhccCChhHH-HHHhhhHHHHHHHHHHHHhcCCCchhhHHHHHHHHHhhhcc
Q 015064 348 GIFSTGICLWIEIAAMRDVSATET-AIIYGLEPLWGAGFAWFLLGERWSTAGWIGAALVLDVQIFL 412 (414)
Q Consensus 348 gv~~~~~~~~l~~~al~~~~a~~~-s~~~~l~pv~a~l~~~~~lge~~s~~~~iG~~LIi~g~~l~ 412 (414)
.+++..++|.+...++|+.+.+.+ ++..-...+.+.+.++++|||++++.+++|..++++|++.-
T Consensus 36 ~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~L 101 (106)
T COG2076 36 TIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGL 101 (106)
T ss_pred HHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHh
Confidence 444567789999999999998887 66777888888999999999999999999999999999764
No 81
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.29 E-value=0.0038 Score=51.26 Aligned_cols=68 Identities=15% Similarity=0.239 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhcchhHH-HHHHhhHHHHHHHHHH-HhcccCchhHHHHHHHHHHhhhhhcc
Q 015064 186 IELGLWVSLGYFVEALGLLTSDAGRA-SFISLFTVIVVPLFDG-MLGAIIPAHTWFGVLISALGVGMLEC 253 (414)
Q Consensus 186 ~~~gl~~~~~~~~~~~al~~~~~~~a-~~l~~~~Pl~~~ll~~-~l~er~~~~~~~gi~l~~~Gv~li~~ 253 (414)
+..-+....++.++..++++.|.+.| ++...+.-+.+.+++. ++||+++..+++|+.+.+.|++++-.
T Consensus 34 i~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l 103 (110)
T PRK09541 34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINL 103 (110)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 33344566788889999999999997 5556788888899998 79999999999999999999999854
No 82
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=97.25 E-value=0.01 Score=57.80 Aligned_cols=128 Identities=14% Similarity=0.109 Sum_probs=105.4
Q ss_pred HHHHHHHHHHHHhhhHHHHHHhhh--cCCHHHHHHHHHHHHHHHHHHHHHH--hcCc----------chhhhHHHHHHHH
Q 015064 126 SIFLLNVITIVYASDIPILKAAEE--IMHPASFCAVRFVMSAIPFLPFVFW--ARDD----------VKTRNAGIELGLW 191 (414)
Q Consensus 126 g~l~~lla~~~wg~~~~~~k~~~~--~~~p~~~~~~R~~~a~l~ll~~~~~--~~~~----------~~~~~~~~~~gl~ 191 (414)
|+++++++.++-|...+..+...+ +.++.+..++-..++.+++++.... .... +......+...+.
T Consensus 155 G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~ 234 (303)
T PF08449_consen 155 GIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLT 234 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHH
Confidence 999999999999999999988876 4889999999999988888776665 2211 1122334455666
Q ss_pred HHHHHHHHHHHHhhcchhHHHHHHhhHHHHHHHHHH-HhcccCchhHHHHHHHHHHhhhhhcc
Q 015064 192 VSLGYFVEALGLLTSDAGRASFISLFTVIVVPLFDG-MLGAIIPAHTWFGVLISALGVGMLEC 253 (414)
Q Consensus 192 ~~~~~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~-~l~er~~~~~~~gi~l~~~Gv~li~~ 253 (414)
+..+..+.++-.+..++...+++..+--+++.+++. +++++++..+|.|+++.+.|..+-..
T Consensus 235 ~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~ 297 (303)
T PF08449_consen 235 GALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSY 297 (303)
T ss_pred HHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHH
Confidence 778888888889999999999999999999999998 68999999999999999999987553
No 83
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=97.14 E-value=0.0044 Score=49.32 Aligned_cols=58 Identities=19% Similarity=0.366 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHHHhccCChhHHHH-HhhhHHHHHHHHHHHHhcCCCchhhHHHHHHH
Q 015064 348 GIFSTGICLWIEIAAMRDVSATETAI-IYGLEPLWGAGFAWFLLGERWSTAGWIGAALV 405 (414)
Q Consensus 348 gv~~~~~~~~l~~~al~~~~a~~~s~-~~~l~pv~a~l~~~~~lge~~s~~~~iG~~LI 405 (414)
.+.+.++++.++.+++|+.+.+.+=. ..-+..+...+.+.+++||++++.++.|.++|
T Consensus 35 ~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 35 AVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 44467788999999999999999955 55699999999999999999999999999886
No 84
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=96.97 E-value=0.00025 Score=65.94 Aligned_cols=135 Identities=18% Similarity=0.263 Sum_probs=97.4
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHhHhhhccCCCCchhHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCcchhhhhcccc
Q 015064 257 PPSVGDFLNFLSAIFFGIHMLRTERISRSTKKENFLPLLGYEICVVALLSTIWVLVGGWFDSSQDFDQSPWTWTMLWDWM 336 (414)
Q Consensus 257 ~~~~G~llal~aa~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~ 336 (414)
..+.|..+.-++ ..+-..+++.++.... ||....-..+++-.++..|..+....+- ..+....-
T Consensus 35 ~p~~gl~l~~vs-~ff~~~~vv~t~~~e~----~p~e~a~~r~l~~mlit~pcliy~~~~v-~gp~g~R~---------- 98 (346)
T KOG4510|consen 35 KPNLGLLLLTVS-YFFNSCMVVSTKVLEN----DPMELASFRLLVRMLITYPCLIYYMQPV-IGPEGKRK---------- 98 (346)
T ss_pred CCccCceehhhH-HHHhhHHHhhhhhhcc----ChhHhhhhhhhhehhhhheEEEEEeeee-ecCCCcEE----------
Confidence 356788888777 7777788888877653 4566666666666666666544433221 11111111
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHhccCChhHHHHHhhhHHHHHHHHHHHHhcCCCchhhHHHHHHHHHhhhcccC
Q 015064 337 VTFPWVPALYTGIFSTGICLWIEIAAMRDVSATETAIIYGLEPLWGAGFAWFLLGERWSTAGWIGAALVLDVQIFLPR 414 (414)
Q Consensus 337 ~~~~~~~ll~lgv~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~~~lge~~s~~~~iG~~LIi~g~~l~~r 414 (414)
| ++.=|+.+ ..+..+.++++++.+-+.+.++.+..|+++.+++|.+++|+.|....+|..+-+.|+++-.|
T Consensus 99 ----~--LiLRg~mG-~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvR 169 (346)
T KOG4510|consen 99 ----W--LILRGFMG-FTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVR 169 (346)
T ss_pred ----E--EEeehhhh-hhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEec
Confidence 1 22334443 33566889999999999999999999999999999999999999999999999999988665
No 85
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=96.85 E-value=0.0064 Score=59.10 Aligned_cols=116 Identities=18% Similarity=0.240 Sum_probs=84.4
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHhHhhhccCCCCchhHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCcchhhhhcccc
Q 015064 257 PPSVGDFLNFLSAIFFGIHMLRTERISRSTKKENFLPLLGYEICVVALLSTIWVLVGGWFDSSQDFDQSPWTWTMLWDWM 336 (414)
Q Consensus 257 ~~~~G~llal~aa~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~ 336 (414)
+...|..+++.++++.+....+.|+...+.+. +...-. .. ..... ....
T Consensus 4 ~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~-~~~~~~------~~----~~~~l------------~~~~-------- 52 (300)
T PF05653_consen 4 DFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPR-GSLRAG------SG----GRSYL------------RRPL-------- 52 (300)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cccccc------ch----hhHHH------------hhHH--------
Confidence 34579999999999999999999987665432 000000 00 00000 0000
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHhccCChhHHHHHhhhHHHHHHHHHHHHhcCCCchhhHHHHHHHHHhhhc
Q 015064 337 VTFPWVPALYTGIFSTGICLWIEIAAMRDVSATETAIIYGLEPLWGAGFAWFLLGERWSTAGWIGAALVLDVQIF 411 (414)
Q Consensus 337 ~~~~~~~ll~lgv~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~~~lge~~s~~~~iG~~LIi~g~~l 411 (414)
| +.|.+..+++..+...|+...+++.++++..+..++..+++.+++||+++...+.|.++++.|..+
T Consensus 53 ----W----~~G~~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~l 119 (300)
T PF05653_consen 53 ----W----WIGLLLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVL 119 (300)
T ss_pred ----H----HHHHHHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhhee
Confidence 2 223334455666778899999999999999999999999999999999999999999999999864
No 86
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.53 E-value=0.093 Score=45.29 Aligned_cols=137 Identities=16% Similarity=0.156 Sum_probs=91.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHhHhhhccCCCCchhHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCcchhhhhccccchh
Q 015064 260 VGDFLNFLSAIFFGIHMLRTERISRSTKKENFLPLLGYEICVVALLSTIWVLVGGWFDSSQDFDQSPWTWTMLWDWMVTF 339 (414)
Q Consensus 260 ~G~llal~aa~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~ 339 (414)
...++++.++++-.+..-++.++.+..+ +|+.-.+..+.++.+.+..+........+.......+
T Consensus 5 l~ll~~i~aG~~l~~Q~~iN~qL~~~~~--spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~p------------- 69 (150)
T COG3238 5 LYLLFAILAGALLPLQAAINGRLARYLG--SPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAP------------- 69 (150)
T ss_pred HHHHHHHHHhhhhhhHHHHHHHHHHHcC--ChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCc-------------
Confidence 3457788899999999999999988754 5788888888998888777666643322222111111
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhccCChhH-HHHHhhhHHHHHHHHHHHHhc----CCCchhhHHHHHHHHHhhhcccC
Q 015064 340 PWVPALYTGIFSTGICLWIEIAAMRDVSATE-TAIIYGLEPLWGAGFAWFLLG----ERWSTAGWIGAALVLDVQIFLPR 414 (414)
Q Consensus 340 ~~~~ll~lgv~~~~~~~~l~~~al~~~~a~~-~s~~~~l~pv~a~l~~~~~lg----e~~s~~~~iG~~LIi~g~~l~~r 414 (414)
|+..+ -|++ .++-.+.-.....+.+++. ......-+.+.+.++|-+=+. .+++...++|.+++++|+++.+|
T Consensus 70 -wW~~~-GG~l-Ga~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~ 146 (150)
T COG3238 70 -WWAWI-GGLL-GAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARR 146 (150)
T ss_pred -hHHHH-ccch-hhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhcc
Confidence 33322 2333 3333445556677776654 456666778888888876443 56899999999999999777654
No 87
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=96.36 E-value=0.024 Score=45.10 Aligned_cols=54 Identities=17% Similarity=0.327 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHHhhcchhHH-HHHHhhHHHHHHHHHH-HhcccCchhHHHHHHH
Q 015064 190 LWVSLGYFVEALGLLTSDAGRA-SFISLFTVIVVPLFDG-MLGAIIPAHTWFGVLI 243 (414)
Q Consensus 190 l~~~~~~~~~~~al~~~~~~~a-~~l~~~~Pl~~~ll~~-~l~er~~~~~~~gi~l 243 (414)
.....++.++..++++.|.+.+ .+...+..+.+.+++. ++||+++..++.|+.+
T Consensus 37 ~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~l 92 (93)
T PF00893_consen 37 VGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGL 92 (93)
T ss_dssp HHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHH
T ss_pred HHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheee
Confidence 3567888999999999999998 6666799999999998 7999999999999875
No 88
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=96.29 E-value=1.3 Score=43.49 Aligned_cols=277 Identities=12% Similarity=0.029 Sum_probs=161.2
Q ss_pred chHHHHHHHHHHHHHhhhHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHh-----------cCcchhhhHHHHHHHH
Q 015064 123 KIRSIFLLNVITIVYASDIPILKAAEEIMHPASFCAVRFVMSAIPFLPFVFWA-----------RDDVKTRNAGIELGLW 191 (414)
Q Consensus 123 ~~~g~l~~lla~~~wg~~~~~~k~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~-----------~~~~~~~~~~~~~gl~ 191 (414)
-..|+++..+++++-++.++..|...+ =..|..+.-..+-.-++.|+..-. .-+.....+..+.|++
T Consensus 5 ii~Gii~h~iGg~~~~sfy~P~kkvk~--WsWEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G~l 82 (344)
T PF06379_consen 5 IILGIIFHAIGGFASGSFYVPFKKVKG--WSWESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFGVL 82 (344)
T ss_pred HHHHHHHHHHHHHHhhhhccchhhcCC--ccHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHHHH
Confidence 467899999999999999998887654 344555544555455555554321 1223345556677888
Q ss_pred HHHHHHHHHHHHhhcchhHH-HHHHhhHHHHHHHHHHHh--------cccCchhHHHHHHHHHHhhhhhcccC-------
Q 015064 192 VSLGYFVEALGLLTSDAGRA-SFISLFTVIVVPLFDGML--------GAIIPAHTWFGVLISALGVGMLECSG------- 255 (414)
Q Consensus 192 ~~~~~~~~~~al~~~~~~~a-~~l~~~~Pl~~~ll~~~l--------~er~~~~~~~gi~l~~~Gv~li~~~~------- 255 (414)
..++...|=.+++|+..+-. ++...+..++..++-.++ .++-....++|++++++|+.++..-+
T Consensus 83 WGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~Ke~~~ 162 (344)
T PF06379_consen 83 WGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMKEKEL 162 (344)
T ss_pred HhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhhhhhh
Confidence 88888888999999887774 444556555555554432 23334467999999999999987432
Q ss_pred ------CCCchhhHHHHHHHHHHHHHHHHHhHhh------hccCCCCchhH----HHHHHHHHHHHHHHHHHHhccC-CC
Q 015064 256 ------SPPSVGDFLNFLSAIFFGIHMLRTERIS------RSTKKENFLPL----LGYEICVVALLSTIWVLVGGWF-DS 318 (414)
Q Consensus 256 ------~~~~~G~llal~aa~~~al~~v~~~~~~------~~~~~~~~~~~----~~~~~~~~~v~~~~~~~~~~~~-~~ 318 (414)
.....|.++++++++.-++..+-...-. .+.. .+++.. ....+..+.+.-+...+..... ..
T Consensus 163 ~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~ag~pi~~~a~a~G-~~~l~~~l~~~vvv~~GGf~tN~~yc~~~l~~~k~ 241 (344)
T PF06379_consen 163 GEEAKEFNFKKGLIIAVLSGVMSACFNFGLDAGKPIHEAAVAAG-VNPLYANLPVYVVVLWGGFITNLIYCLILLAKNKN 241 (344)
T ss_pred ccchhhhhhhhhHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHcC-CCcHHHhCchhhhhhhhHHHHHHHHHHHHHhhcCC
Confidence 1236899999999988888877654211 1111 222211 1111222333333333332111 11
Q ss_pred C---CCCCCCcchhhhhccccchhhHHHHHHHHHHHHHHHHHHHHHHhccCC----hhHHHHHhhhHHHHHHHHHHHHhc
Q 015064 319 S---QDFDQSPWTWTMLWDWMVTFPWVPALYTGIFSTGICLWIEIAAMRDVS----ATETAIIYGLEPLWGAGFAWFLLG 391 (414)
Q Consensus 319 ~---~~~~~~~~~~~~~~~w~~~~~~~~ll~lgv~~~~~~~~l~~~al~~~~----a~~~s~~~~l~pv~a~l~~~~~lg 391 (414)
. .+.+.....+ .+.+...+..|++- ..++.+|.++-.+.+ ..--.+...+..+++-++|.+ ++
T Consensus 242 ~s~~~d~~~~~~~~--------~~N~~~~aLaG~lW-y~qfffYg~G~s~lg~~~~~~sW~i~ma~~vl~snvwGl~-lk 311 (344)
T PF06379_consen 242 WSWKGDYSVAKPPL--------LKNYLFCALAGVLW-YSQFFFYGMGESKLGASGPFSSWAIHMALIVLFSNVWGLI-LK 311 (344)
T ss_pred Cccccccccccchh--------HHHHHHHHHHHHHH-HHHHHHHHHHHHHhcCccccHHHHHHHHHHHHHHHHHHHH-HH
Confidence 1 1111000000 01122222233332 446667777766666 445567788888899999975 67
Q ss_pred CCC------chhhHHHHHHHHHhhhcc
Q 015064 392 ERW------STAGWIGAALVLDVQIFL 412 (414)
Q Consensus 392 e~~------s~~~~iG~~LIi~g~~l~ 412 (414)
|.- -...++|.++++.++++.
T Consensus 312 EWKg~s~kt~~vl~~G~~vlI~s~~iv 338 (344)
T PF06379_consen 312 EWKGASKKTIRVLVLGIAVLILSVVIV 338 (344)
T ss_pred HhccCCcccHHHHHHHHHHHHHHHHHH
Confidence 752 234567888888877653
No 89
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=96.19 E-value=0.025 Score=53.32 Aligned_cols=73 Identities=15% Similarity=0.222 Sum_probs=63.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhccCChhHHHHHhhhHHHHHHHHHHHHhcCCCchhhHHHHHHHHHhhhccc
Q 015064 340 PWVPALYTGIFSTGICLWIEIAAMRDVSATETAIIYGLEPLWGAGFAWFLLGERWSTAGWIGAALVLDVQIFLP 413 (414)
Q Consensus 340 ~~~~ll~lgv~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~~~lge~~s~~~~iG~~LIi~g~~l~~ 413 (414)
..+.+.+-+++ ..+...+.+.++++.+|+...++..+..+++.++.+++++++++..||++..+++.|+.+.+
T Consensus 16 ~~~~~~vPA~l-Y~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~ 88 (244)
T PF04142_consen 16 DTLKLAVPALL-YAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQ 88 (244)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheee
Confidence 34444444554 67788899999999999999999999999999999999999999999999999999998754
No 90
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.97 E-value=0.4 Score=41.45 Aligned_cols=129 Identities=11% Similarity=0.065 Sum_probs=86.3
Q ss_pred hHHHHHHHHHHHHHhhhHHHHHHhhhcCC-HHHHHHHHHHHHHHHHHHHHHHhcCc------chhhhHHHHHHHHHHHHH
Q 015064 124 IRSIFLLNVITIVYASDIPILKAAEEIMH-PASFCAVRFVMSAIPFLPFVFWARDD------VKTRNAGIELGLWVSLGY 196 (414)
Q Consensus 124 ~~g~l~~lla~~~wg~~~~~~k~~~~~~~-p~~~~~~R~~~a~l~ll~~~~~~~~~------~~~~~~~~~~gl~~~~~~ 196 (414)
...++..+++..+-.....+.-.+.+..+ |....++-+.++.+++..+...+.+. .+.++|.+.-|+++....
T Consensus 4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~~GG~lGa~~v 83 (150)
T COG3238 4 YLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAWIGGLLGAIFV 83 (150)
T ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHHHccchhhhhh
Confidence 45567777788888777777777776665 99999999999888888766654332 122344455565555555
Q ss_pred HHHHHHHhhcchhHHHHHH-hhHHHHHHHHHHH--h---cccCchhHHHHHHHHHHhhhhhc
Q 015064 197 FVEALGLLTSDAGRASFIS-LFTVIVVPLFDGM--L---GAIIPAHTWFGVLISALGVGMLE 252 (414)
Q Consensus 197 ~~~~~al~~~~~~~a~~l~-~~~Pl~~~ll~~~--l---~er~~~~~~~gi~l~~~Gv~li~ 252 (414)
...........++....+. .-+-+...++..+ + +++++..+++|+++.++|+.++-
T Consensus 84 t~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~ 145 (150)
T COG3238 84 TSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLAR 145 (150)
T ss_pred hhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhc
Confidence 5555666666666654444 4444455555543 3 47788899999999999955544
No 91
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=95.73 E-value=0.12 Score=42.61 Aligned_cols=62 Identities=19% Similarity=0.203 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHHHhccCChhHHHHHh-hhHHHHHHHHHHHHhcCCCchhhHHHHHHHHHhhhc
Q 015064 350 FSTGICLWIEIAAMRDVSATETAIIY-GLEPLWGAGFAWFLLGERWSTAGWIGAALVLDVQIF 411 (414)
Q Consensus 350 ~~~~~~~~l~~~al~~~~a~~~s~~~-~l~pv~a~l~~~~~lge~~s~~~~iG~~LIi~g~~l 411 (414)
.....+-..|++.+.+.+-+.+.++. .+.-+++++.++++.+|..+...++|+++|+.|+.+
T Consensus 49 ~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L 111 (113)
T PF10639_consen 49 LLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL 111 (113)
T ss_pred HHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence 33444566788889999999999995 899999999999888888899999999999999865
No 92
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=94.98 E-value=0.069 Score=52.08 Aligned_cols=130 Identities=15% Similarity=0.086 Sum_probs=103.0
Q ss_pred chHHHHHHHHHHHHHhhhHHHHHHhhh----cCCHHHHHHHHHHHHHHHHH-HHHHHhcCcch------hhh----HHHH
Q 015064 123 KIRSIFLLNVITIVYASDIPILKAAEE----IMHPASFCAVRFVMSAIPFL-PFVFWARDDVK------TRN----AGIE 187 (414)
Q Consensus 123 ~~~g~l~~lla~~~wg~~~~~~k~~~~----~~~p~~~~~~R~~~a~l~ll-~~~~~~~~~~~------~~~----~~~~ 187 (414)
...|.+..+.+.+..+.-.++.|.++. ++++++....-.-++.+.++ |+.....+... .+. ....
T Consensus 161 n~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (316)
T KOG1441|consen 161 NLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLILLL 240 (316)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHHHHH
Confidence 468999999999999999999998883 49999999999889998888 87766433221 111 1222
Q ss_pred HHHHHHHHHHHHHHHHhhcchhHHHHHHhhHHHHHHHHHH-HhcccCchhHHHHHHHHHHhhhhhc
Q 015064 188 LGLWVSLGYFVEALGLLTSDAGRASFISLFTVIVVPLFDG-MLGAIIPAHTWFGVLISALGVGMLE 252 (414)
Q Consensus 188 ~gl~~~~~~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~-~l~er~~~~~~~gi~l~~~Gv~li~ 252 (414)
..++.+..+..-|..+.++++-.-++....--.++.+.++ +++++++..+.+|.+++++|+++-.
T Consensus 241 ~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~ 306 (316)
T KOG1441|consen 241 NSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYS 306 (316)
T ss_pred HHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHH
Confidence 2455566677888888999998888888777777788887 7899999999999999999998754
No 93
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=94.90 E-value=0.3 Score=46.82 Aligned_cols=130 Identities=12% Similarity=0.046 Sum_probs=106.1
Q ss_pred cchHHHHHHHHHHHHHhhhHHHHHHhhhc--CCHHHHHHHHHHHHHHHHHHHHHHhc----------CcchhhhHHHHHH
Q 015064 122 KKIRSIFLLNVITIVYASDIPILKAAEEI--MHPASFCAVRFVMSAIPFLPFVFWAR----------DDVKTRNAGIELG 189 (414)
Q Consensus 122 ~~~~g~l~~lla~~~wg~~~~~~k~~~~~--~~p~~~~~~R~~~a~l~ll~~~~~~~----------~~~~~~~~~~~~g 189 (414)
....|++++...-++=|+.+..-+.+.++ +++.++.+.-.++..+.-........ +.+...+..++..
T Consensus 169 ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s 248 (327)
T KOG1581|consen 169 NSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYS 248 (327)
T ss_pred CchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHH
Confidence 34678999988888889888888777764 88999999988888887776654432 2344556678889
Q ss_pred HHHHHHHHHHHHHHhhcchhHHHHHHhhHHHHHHHHHH-HhcccCchhHHHHHHHHHHhhhhh
Q 015064 190 LWVSLGYFVEALGLLTSDAGRASFISLFTVIVVPLFDG-MLGAIIPAHTWFGVLISALGVGML 251 (414)
Q Consensus 190 l~~~~~~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~-~l~er~~~~~~~gi~l~~~Gv~li 251 (414)
.++..+..+.|+-++.-.+-.-+.|+-+--++..+++. .++.+++..+|+|+.+.+.|+.+=
T Consensus 249 ~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~ 311 (327)
T KOG1581|consen 249 TCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLE 311 (327)
T ss_pred HhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHH
Confidence 99999999999999987777777888888999999998 699999999999999999988763
No 94
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=94.39 E-value=0.34 Score=44.74 Aligned_cols=66 Identities=18% Similarity=0.208 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcchhHHHHHHhhHHHHHHHHHH-HhcccCchhHHHHHHHHHHhhhh
Q 015064 185 GIELGLWVSLGYFVEALGLLTSDAGRASFISLFTVIVVPLFDG-MLGAIIPAHTWFGVLISALGVGM 250 (414)
Q Consensus 185 ~~~~gl~~~~~~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~-~l~er~~~~~~~gi~l~~~Gv~l 250 (414)
.+...+....+..+..+.+++.+...-++...+.++++.+++. +++|+++..+++|+.+.+.|+.+
T Consensus 155 ~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l 221 (222)
T TIGR00803 155 VWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL 221 (222)
T ss_pred HHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence 4444566677778899999999999999999999999999998 79999999999999999998754
No 95
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=94.36 E-value=0.78 Score=43.38 Aligned_cols=159 Identities=13% Similarity=0.018 Sum_probs=107.7
Q ss_pred HHHHHHHHHHHHhhhHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHhcCcchhhhHHHHHHHHHHHHHHHHHHHHhh
Q 015064 126 SIFLLNVITIVYASDIPILKAAEEIMHPASFCAVRFVMSAIPFLPFVFWARDDVKTRNAGIELGLWVSLGYFVEALGLLT 205 (414)
Q Consensus 126 g~l~~lla~~~wg~~~~~~k~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~al~~ 205 (414)
|++..+++++++|++++-.|.-.. -|++.+-++-.....+.-+..... +...+...+..+-|.+...++.+-.-.++.
T Consensus 1 G~~a~~va~~~fGs~~vPvK~~~~-gDg~~fQw~~~~~i~~~g~~v~~~-~~~p~f~p~amlgG~lW~~gN~~~vpii~~ 78 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKKFDT-GDGFFFQWVMCSGIFLVGLVVNLI-LGFPPFYPWAMLGGALWATGNILVVPIIKT 78 (254)
T ss_pred CchhHHHHHHHhcccceeeEeccC-CCcHHHHHHHHHHHHHHHHHHHHh-cCCCcceeHHHhhhhhhhcCceeehhHhhh
Confidence 456788999999999999996443 566665555544433333333322 333445556666678888999999999999
Q ss_pred cchhHHHHHHhhHHH-HHHHHHH--Hhcc---cC--chhHHHHHHHHHHhhhhhccc--CC-------C-----------
Q 015064 206 SDAGRASFISLFTVI-VVPLFDG--MLGA---II--PAHTWFGVLISALGVGMLECS--GS-------P----------- 257 (414)
Q Consensus 206 ~~~~~a~~l~~~~Pl-~~~ll~~--~l~e---r~--~~~~~~gi~l~~~Gv~li~~~--~~-------~----------- 257 (414)
+..+....+-.+.-+ .....+. ++++ .+ +....+|++++++|..+...- +. .
T Consensus 79 iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~~~~~~~~~~~~~~~~~~~~ 158 (254)
T PF07857_consen 79 IGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEEKEPKKSSEETPLSIEDVIE 158 (254)
T ss_pred hhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCCCCccccccccccccccccc
Confidence 999998888776444 4444443 3432 22 236789999999998887621 00 0
Q ss_pred ----------------------CchhhHHHHHHHHHHHHHHHHHhHhhhcc
Q 015064 258 ----------------------PSVGDFLNFLSAIFFGIHMLRTERISRST 286 (414)
Q Consensus 258 ----------------------~~~G~llal~aa~~~al~~v~~~~~~~~~ 286 (414)
-..|..+++++++.|+...+=.....++.
T Consensus 159 ~~~~~~~~~~~S~vd~l~~~~~RivG~~LAv~aGvlyGs~fvPv~Yi~~~~ 209 (254)
T PF07857_consen 159 IEDDSENSEDSSWVDELSPRKKRIVGIILAVFAGVLYGSNFVPVIYIQDHP 209 (254)
T ss_pred cccccccccccccccccccccchhHhHHHHHHHHHHHhcccchHHHHHhCc
Confidence 03688999999999999887776665543
No 96
>PRK13499 rhamnose-proton symporter; Provisional
Probab=94.14 E-value=1.8 Score=42.83 Aligned_cols=133 Identities=18% Similarity=0.159 Sum_probs=78.8
Q ss_pred cchHHHHHHHHHHHHHhhhH-------HHHHHhh-hcCCHHHHHHHHHH---HHHH-HHHHHHHH---hcCc------ch
Q 015064 122 KKIRSIFLLNVITIVYASDI-------PILKAAE-EIMHPASFCAVRFV---MSAI-PFLPFVFW---ARDD------VK 180 (414)
Q Consensus 122 ~~~~g~l~~lla~~~wg~~~-------~~~k~~~-~~~~p~~~~~~R~~---~a~l-~ll~~~~~---~~~~------~~ 180 (414)
...||++.++++.+..+..+ +..+... .+.++.....-.+. ++.+ .-+.++.+ ++++ ++
T Consensus 171 ~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~~~~k~~~~~~~~~~~ 250 (345)
T PRK13499 171 NLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAITNLGFCFIRLAKNKDLSLKADFS 250 (345)
T ss_pred chHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchhcc
Confidence 34689999999999988887 4444322 23454443333332 3333 23233332 2121 11
Q ss_pred h-----hhH---HHHHHHHHHHHHHHHHHHHhhcchhHHHH---HH-hhHHHHHHHHHHHhcccCc--h----hHHHHHH
Q 015064 181 T-----RNA---GIELGLWVSLGYFVEALGLLTSDAGRASF---IS-LFTVIVVPLFDGMLGAIIP--A----HTWFGVL 242 (414)
Q Consensus 181 ~-----~~~---~~~~gl~~~~~~~~~~~al~~~~~~~a~~---l~-~~~Pl~~~ll~~~l~er~~--~----~~~~gi~ 242 (414)
. .+. ..+.|+....++.+|..+-+..+.+.+.+ +. .+.-++..+-+.++||+-+ + .-++|++
T Consensus 251 ~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi~lkE~K~a~~k~~~~l~~G~v 330 (345)
T PRK13499 251 LAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGLVLKEWKGASRRPVRVLSLGCV 330 (345)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhhhhhhccCCCccchhHHHHHHH
Confidence 1 111 24447777888889999988886665544 44 4444566665667998877 3 4578888
Q ss_pred HHHHhhhhhccc
Q 015064 243 ISALGVGMLECS 254 (414)
Q Consensus 243 l~~~Gv~li~~~ 254 (414)
+.++|++++...
T Consensus 331 liI~g~~lig~~ 342 (345)
T PRK13499 331 VIILAANIVGLG 342 (345)
T ss_pred HHHHHHHHHhhc
Confidence 888888877643
No 97
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=93.93 E-value=0.63 Score=43.04 Aligned_cols=129 Identities=9% Similarity=-0.002 Sum_probs=92.2
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHhhhc--CCHHHHHHHHHHHHHHHHHHHHH----------HhcCcchhhhHHHHHHHHH
Q 015064 125 RSIFLLNVITIVYASDIPILKAAEEI--MHPASFCAVRFVMSAIPFLPFVF----------WARDDVKTRNAGIELGLWV 192 (414)
Q Consensus 125 ~g~l~~lla~~~wg~~~~~~k~~~~~--~~p~~~~~~R~~~a~l~ll~~~~----------~~~~~~~~~~~~~~~gl~~ 192 (414)
.|-++++++-..=|.....-...-.+ -+..+..+.-.+.+.+.+..-+. ...|.+..+.....+++..
T Consensus 172 ~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~ai~s 251 (337)
T KOG1580|consen 172 FGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYVFWDLTLLAIAS 251 (337)
T ss_pred hHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 56677777776667666655443322 23334444445555554443222 2334445556667778889
Q ss_pred HHHHHHHHHHHhhcchhHHHHHHhhHHHHHHHHHH-HhcccCchhHHHHHHHHHHhhhhhcc
Q 015064 193 SLGYFVEALGLLTSDAGRASFISLFTVIVVPLFDG-MLGAIIPAHTWFGVLISALGVGMLEC 253 (414)
Q Consensus 193 ~~~~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~-~l~er~~~~~~~gi~l~~~Gv~li~~ 253 (414)
.++..+.|.-+.+-++-..+++..+--.|+.+.+. +++.+++.++|+|..+.+.|...=..
T Consensus 252 ~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~ 313 (337)
T KOG1580|consen 252 CLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVV 313 (337)
T ss_pred HhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhh
Confidence 99999999999988888889999999999999998 68999999999999999999876443
No 98
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=93.79 E-value=0.031 Score=51.76 Aligned_cols=128 Identities=13% Similarity=0.075 Sum_probs=82.4
Q ss_pred hhHHHHHHHHHHHHHHHHHhHhhhccCCCCchhHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCcchhhhhccccchhh
Q 015064 261 GDFLNFLSAIFFGIHMLRTERISRSTKKENFLPLLGYEICVVALLSTIWVLVGGWFDSSQDFDQSPWTWTMLWDWMVTFP 340 (414)
Q Consensus 261 G~llal~aa~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~ 340 (414)
+.+.+++-++.|+..-....+...+ |..-+..+.+.+.++.+...++.. +.. + .+.
T Consensus 3 ~~liaL~P~l~WGsip~v~~k~GG~-----p~qQ~lGtT~GALifaiiv~~~~~---p~~-------T---------~~~ 58 (288)
T COG4975 3 DLLIALLPALGWGSIPLVANKFGGK-----PYQQTLGTTLGALIFAIIVFLFVS---PEL-------T---------LTI 58 (288)
T ss_pred hHHHHHHHHHHhcccceeeeecCCC-----hhHhhhhccHHHHHHHHHHheeec---Ccc-------c---------hhh
Confidence 5678899999999888777776543 222222222333333333222211 100 1 111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCChhHHHHHhh-hHHHHHHHHHHHHhcCCCchhhHH----HHHHHHHhhhccc
Q 015064 341 WVPALYTGIFSTGICLWIEIAAMRDVSATETAIIYG-LEPLWGAGFAWFLLGERWSTAGWI----GAALVLDVQIFLP 413 (414)
Q Consensus 341 ~~~ll~lgv~~~~~~~~l~~~al~~~~a~~~s~~~~-l~pv~a~l~~~~~lge~~s~~~~i----G~~LIi~g~~l~~ 413 (414)
+..-+..|.+- .+++..+.++++..+.+++.+++. ++.+-+.+++.++|||..+..+.+ ..+++++|+.+.+
T Consensus 59 ~iv~~isG~~W-s~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs 135 (288)
T COG4975 59 FIVGFISGAFW-SFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTS 135 (288)
T ss_pred HHHHHHhhhHh-hhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEee
Confidence 33333344433 458999999999999999998875 667777899999999999988764 5677888887754
No 99
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=92.79 E-value=3.5 Score=40.51 Aligned_cols=62 Identities=18% Similarity=0.286 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHhccCChhHHHHHhhhHHHHHHHHHHHHhcCCCchhhHHHHHHHHHhhhccc
Q 015064 352 TGICLWIEIAAMRDVSATETAIIYGLEPLWGAGFAWFLLGERWSTAGWIGAALVLDVQIFLP 413 (414)
Q Consensus 352 ~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~~~lge~~s~~~~iG~~LIi~g~~l~~ 413 (414)
..+..-+++.+..+.+|+...+...+..+.+.++..++++++++..||....+..+|+.+.+
T Consensus 102 YalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ 163 (345)
T KOG2234|consen 102 YALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQ 163 (345)
T ss_pred HHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHh
Confidence 45566688999999999999999999999999999999999999999999999999998765
No 100
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=92.67 E-value=0.34 Score=38.84 Aligned_cols=114 Identities=11% Similarity=0.100 Sum_probs=73.5
Q ss_pred HHHHHHHHHhhhHHHHHHhhhcCCHHHH--HHHHHHHHHHHHHHHHHHhcCcchhhhHHHHHHHHHHHHHHHHHHHHhhc
Q 015064 129 LLNVITIVYASDIPILKAAEEIMHPASF--CAVRFVMSAIPFLPFVFWARDDVKTRNAGIELGLWVSLGYFVEALGLLTS 206 (414)
Q Consensus 129 ~~lla~~~wg~~~~~~k~~~~~~~p~~~--~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~al~~~ 206 (414)
-++..+++||...++.|......+-..- ..+|..+. .-+..--...++.--+++-.+..+||.-+++.
T Consensus 7 ~lvaVgllWG~Tnplirrgs~g~~~v~~~~~k~~~~lq----------e~~tl~l~w~Y~iPFllNqcgSaly~~tLa~a 76 (125)
T KOG4831|consen 7 KLVAVGLLWGATNPLIRRGSLGWDKVKSSSRKIMIALQ----------EMKTLFLNWEYLIPFLLNQCGSALYYLTLASA 76 (125)
T ss_pred HHHHHHHHHccccHHHHHHHhhHhhccCchHHHHHHHH----------HHHHHHHhHHHHHHHHHHHhhHHHHHHHHhcC
Confidence 4566788999999999987754221100 11111110 00111111223333445666778899999999
Q ss_pred chhHHHHHHh-hHHHHHHHHHHHhcccCch-hHHHHHHHHHHhhhhhc
Q 015064 207 DAGRASFISL-FTVIVVPLFDGMLGAIIPA-HTWFGVLISALGVGMLE 252 (414)
Q Consensus 207 ~~~~a~~l~~-~~Pl~~~ll~~~l~er~~~-~~~~gi~l~~~Gv~li~ 252 (414)
|.+.++-+.+ +.-.|+++.+..++|+.+. +.++|..+.+.|+.+.+
T Consensus 77 ~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lci 124 (125)
T KOG4831|consen 77 PISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLCI 124 (125)
T ss_pred CceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhee
Confidence 9999877765 5566888888888888775 56899999999987754
No 101
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=92.22 E-value=1.8 Score=42.83 Aligned_cols=135 Identities=13% Similarity=0.089 Sum_probs=93.2
Q ss_pred ccchHHHHHHHHHHHHHhhhHHHHHHhhhc----CCHHHHHHHHHHHHHHHHHHHHHHh----cCcch--h---hhHHHH
Q 015064 121 SKKIRSIFLLNVITIVYASDIPILKAAEEI----MHPASFCAVRFVMSAIPFLPFVFWA----RDDVK--T---RNAGIE 187 (414)
Q Consensus 121 ~~~~~g~l~~lla~~~wg~~~~~~k~~~~~----~~p~~~~~~R~~~a~l~ll~~~~~~----~~~~~--~---~~~~~~ 187 (414)
.+...|-++.+++++++|..-++.|.-.++ ++--.+.-+--++..++++|.++.- ..+.. . ....+.
T Consensus 243 ~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~q~~~vv~ 322 (416)
T KOG2765|consen 243 SRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSSTQFSLVVF 322 (416)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCceeEeeeH
Confidence 345789999999999999999999876653 3322222222344445555443321 11111 1 112233
Q ss_pred HHHH-HHHHHHHHHHHHhhcchhHHHHHHhhHHHHHHHHHHH-hcccCchhHHHHHHHHHHhhhhhcccC
Q 015064 188 LGLW-VSLGYFVEALGLLTSDAGRASFISLFTVIVVPLFDGM-LGAIIPAHTWFGVLISALGVGMLECSG 255 (414)
Q Consensus 188 ~gl~-~~~~~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~~-l~er~~~~~~~gi~l~~~Gv~li~~~~ 255 (414)
.++. .+++-+++..|.-.+++-.+++-+.+.....++...+ -+.+++...++|....++|-+++...+
T Consensus 323 ~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~ 392 (416)
T KOG2765|consen 323 NNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISS 392 (416)
T ss_pred hhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheeccc
Confidence 4554 3577799999999999999988888777777777775 478899999999999999999887654
No 102
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=89.78 E-value=0.19 Score=48.56 Aligned_cols=115 Identities=18% Similarity=0.193 Sum_probs=84.7
Q ss_pred CchhhHHHHHHHHHHHHHHHHHhHhhhccCCCCchhHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCcchhhhhccccc
Q 015064 258 PSVGDFLNFLSAIFFGIHMLRTERISRSTKKENFLPLLGYEICVVALLSTIWVLVGGWFDSSQDFDQSPWTWTMLWDWMV 337 (414)
Q Consensus 258 ~~~G~llal~aa~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~ 337 (414)
...|.++++.+.+..+...++.|+-.++... ...-.+ +..... ..++
T Consensus 19 ~~~G~~LaissS~~Ig~sfilkKkgl~r~~~--------------------~~~ra~--~gg~~y-l~~~---------- 65 (335)
T KOG2922|consen 19 NIIGLVLAISSSIFIGSSFILKKKGLKRAGA--------------------SGLRAG--EGGYGY-LKEP---------- 65 (335)
T ss_pred ceeeeeehhhccEEEeeehhhhHHHHHHHhh--------------------hccccc--CCCcch-hhhH----------
Confidence 4578889999999999888888876655210 000000 000000 0111
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhccCChhHHHHHhhhHHHHHHHHHHHHhcCCCchhhHHHHHHHHHhhhc
Q 015064 338 TFPWVPALYTGIFSTGICLWIEIAAMRDVSATETAIIYGLEPLWGAGFAWFLLGERWSTAGWIGAALVLDVQIF 411 (414)
Q Consensus 338 ~~~~~~ll~lgv~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~~~lge~~s~~~~iG~~LIi~g~~l 411 (414)
.-+.|.+..++|-.+.+.+....+++.++++..++.+.+.+++..+++|.++....+|+++.++|..+
T Consensus 66 ------~Ww~G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~ 133 (335)
T KOG2922|consen 66 ------LWWAGMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTT 133 (335)
T ss_pred ------HHHHHHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEE
Confidence 12457777778888888899999999999999999999999999999999999999999999888643
No 103
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=83.84 E-value=8.4 Score=37.38 Aligned_cols=128 Identities=10% Similarity=0.006 Sum_probs=91.2
Q ss_pred hHHHHHHHHHHHHHhhhHHHHHHhhh--cCCHHHHHHHHHHHHHHHHHHHHHHhcC---------cchh---hhHHHHHH
Q 015064 124 IRSIFLLNVITIVYASDIPILKAAEE--IMHPASFCAVRFVMSAIPFLPFVFWARD---------DVKT---RNAGIELG 189 (414)
Q Consensus 124 ~~g~l~~lla~~~wg~~~~~~k~~~~--~~~p~~~~~~R~~~a~l~ll~~~~~~~~---------~~~~---~~~~~~~g 189 (414)
.+|+.+++...+.-+...+..|.-.+ +.+-++++++..+.+.+.+......... +... +....+.+
T Consensus 156 ~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lSc 235 (314)
T KOG1444|consen 156 LRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSC 235 (314)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHH
Confidence 45788888888888888888887765 4777888889888888777766543221 1111 22333446
Q ss_pred HHHHHHHHHHHHHHhhcchhHHHHHHhhHHHHHHHHHH-HhcccCchhHHHHHHHHHHhhhhh
Q 015064 190 LWVSLGYFVEALGLLTSDAGRASFISLFTVIVVPLFDG-MLGAIIPAHTWFGVLISALGVGML 251 (414)
Q Consensus 190 l~~~~~~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~-~l~er~~~~~~~gi~l~~~Gv~li 251 (414)
+++++-.++.++..+..++...++.....-..+.+... +.++++++...+|+.++++|-++-
T Consensus 236 v~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y 298 (314)
T KOG1444|consen 236 VMGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLY 298 (314)
T ss_pred HHHHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHH
Confidence 67777778999999999999988888444444444445 467899999999999988886553
No 104
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=82.96 E-value=4.4 Score=38.33 Aligned_cols=124 Identities=17% Similarity=0.182 Sum_probs=73.4
Q ss_pred hhHHHHHHHHHHHHHHHHHhHhhhccCCCCchhHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCcchhhhhccccchhh
Q 015064 261 GDFLNFLSAIFFGIHMLRTERISRSTKKENFLPLLGYEICVVALLSTIWVLVGGWFDSSQDFDQSPWTWTMLWDWMVTFP 340 (414)
Q Consensus 261 G~llal~aa~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~ 340 (414)
|.+.+++|+++++-..+=.|+.... |.+...+++.....+..+...+..+.+ . .
T Consensus 1 G~~a~~va~~~fGs~~vPvK~~~~g----Dg~~fQw~~~~~i~~~g~~v~~~~~~p---~---f---------------- 54 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKKFDTG----DGFFFQWVMCSGIFLVGLVVNLILGFP---P---F---------------- 54 (254)
T ss_pred CchhHHHHHHHhcccceeeEeccCC----CcHHHHHHHHHHHHHHHHHHHHhcCCC---c---c----------------
Confidence 5678899999999999988877543 556655555554444444444443211 1 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCChhHHHHHh-hhHHHHHHHHHHH-HhcCCC-----chhhHHHHHHHHHhhhc
Q 015064 341 WVPALYTGIFSTGICLWIEIAAMRDVSATETAIIY-GLEPLWGAGFAWF-LLGERW-----STAGWIGAALVLDVQIF 411 (414)
Q Consensus 341 ~~~ll~lgv~~~~~~~~l~~~al~~~~a~~~s~~~-~l~pv~a~l~~~~-~lge~~-----s~~~~iG~~LIi~g~~l 411 (414)
+. ...+|..--..+..+-.-.+|.++-+..-.+- ..+.+.+-..+.+ +||+.+ .+.-++|.+++++|..+
T Consensus 55 ~p-~amlgG~lW~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~ 131 (254)
T PF07857_consen 55 YP-WAMLGGALWATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGII 131 (254)
T ss_pred ee-HHHhhhhhhhcCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHh
Confidence 11 22233322344555556667777766654443 3366666666654 565543 55678899999888764
No 105
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=82.55 E-value=2.1 Score=38.64 Aligned_cols=58 Identities=17% Similarity=0.344 Sum_probs=52.7
Q ss_pred HHHHHHHHhccCChhHHHHHhhhHHHHHHHHHHHHhcCCCchhhHHHHHHHHHhhhcc
Q 015064 355 CLWIEIAAMRDVSATETAIIYGLEPLWGAGFAWFLLGERWSTAGWIGAALVLDVQIFL 412 (414)
Q Consensus 355 ~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~~~lge~~s~~~~iG~~LIi~g~~l~ 412 (414)
+..+|..++++++++.++.+..-+--+..+++++++|+++....+....+-+.|++..
T Consensus 66 aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmi 123 (290)
T KOG4314|consen 66 ANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMI 123 (290)
T ss_pred CCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEE
Confidence 3448899999999999999999999999999999999999999999999988887653
No 106
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=78.34 E-value=5.1 Score=38.21 Aligned_cols=60 Identities=13% Similarity=0.148 Sum_probs=54.1
Q ss_pred HHHHHHHHHHhccCChhHHHHHhhhHHHHHHHHHHHHhcCCCchhhHHHHHHHHHhhhcc
Q 015064 353 GICLWIEIAAMRDVSATETAIIYGLEPLWGAGFAWFLLGERWSTAGWIGAALVLDVQIFL 412 (414)
Q Consensus 353 ~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~~~lge~~s~~~~iG~~LIi~g~~l~ 412 (414)
..+-.+++.++..+.++...++.--..+|.-+++.-+++..++..||.|+..+..|++.+
T Consensus 97 i~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviV 156 (372)
T KOG3912|consen 97 IAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIV 156 (372)
T ss_pred HhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhhee
Confidence 445567888999999999999999999999999999999999999999999999998754
No 107
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=78.32 E-value=18 Score=29.25 Aligned_cols=32 Identities=28% Similarity=0.283 Sum_probs=27.9
Q ss_pred HHHHHHHhcCCCchhhHHHHHHHHHhhhcccC
Q 015064 383 AGFAWFLLGERWSTAGWIGAALVLDVQIFLPR 414 (414)
Q Consensus 383 ~l~~~~~lge~~s~~~~iG~~LIi~g~~l~~r 414 (414)
..++.++++|++++..+.|.+++++++.+.-|
T Consensus 77 ~~Fsv~~l~E~l~~n~l~af~~i~~av~fiFr 108 (108)
T PF04342_consen 77 APFSVFYLGEPLKWNYLWAFLCILGAVYFIFR 108 (108)
T ss_pred HHHHHHHhCCCccHHHHHHHHHHHHhhheeeC
Confidence 45678899999999999999999999887654
No 108
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=77.72 E-value=41 Score=32.68 Aligned_cols=128 Identities=16% Similarity=0.137 Sum_probs=80.6
Q ss_pred hHHHHHHHHHHHHHhhhHHHHHHhhhc-----CCHHHHHHHHHHHHHHHHHHHHHHhcCcc-----h---------hhhH
Q 015064 124 IRSIFLLNVITIVYASDIPILKAAEEI-----MHPASFCAVRFVMSAIPFLPFVFWARDDV-----K---------TRNA 184 (414)
Q Consensus 124 ~~g~l~~lla~~~wg~~~~~~k~~~~~-----~~p~~~~~~R~~~a~l~ll~~~~~~~~~~-----~---------~~~~ 184 (414)
..|..+...+.++=|.-+.+.+.+.++ =+|....+--.-...+.++|..+.-.+.. + ..+.
T Consensus 163 i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv 242 (349)
T KOG1443|consen 163 IEGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRV 242 (349)
T ss_pred ehhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHH
Confidence 468888888999989999999888764 23666555544444555555544332211 0 1111
Q ss_pred HHHHHHHHHHHH---HHHHHHHhhcchhHHHHHHhhHHHHHHHHHH-HhcccCchhHHHHHHHHHHhhhhh
Q 015064 185 GIELGLWVSLGY---FVEALGLLTSDAGRASFISLFTVIVVPLFDG-MLGAIIPAHTWFGVLISALGVGML 251 (414)
Q Consensus 185 ~~~~gl~~~~~~---~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~-~l~er~~~~~~~gi~l~~~Gv~li 251 (414)
.-..++.+..++ ..-+.=+..++.-..++..-.-=+.+.+++. +.+++++...|.|..++..|+.+=
T Consensus 243 ~g~i~l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~ 313 (349)
T KOG1443|consen 243 IGLISLGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLH 313 (349)
T ss_pred HHHHHHHHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHh
Confidence 111122222333 3344445566655555655566667778887 689999999999999999999876
No 109
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=75.76 E-value=14 Score=34.24 Aligned_cols=98 Identities=15% Similarity=0.110 Sum_probs=72.8
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHhcC-cc---------hhhhHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHhhHH
Q 015064 150 IMHPASFCAVRFVMSAIPFLPFVFWARD-DV---------KTRNAGIELGLWVSLGYFVEALGLLTSDAGRASFISLFTV 219 (414)
Q Consensus 150 ~~~p~~~~~~R~~~a~l~ll~~~~~~~~-~~---------~~~~~~~~~gl~~~~~~~~~~~al~~~~~~~a~~l~~~~P 219 (414)
+..-++..++..+++..+++.+-..... .. ....+..+.|++.++-.++.-+.++-++.+.-+++..+.-
T Consensus 182 Nf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~svgiSy~saWcvrVtSSTtySMvGALNK 261 (309)
T COG5070 182 NFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSVGISYCSAWCVRVTSSTTYSMVGALNK 261 (309)
T ss_pred ccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHhhhhhccceeEeehhhhHHHHHHHhhh
Confidence 4667888999999988888766554321 11 1122444557766666678888899999999999999998
Q ss_pred HHHHHHHH-HhcccCchhHHHHHHHHHHh
Q 015064 220 IVVPLFDG-MLGAIIPAHTWFGVLISALG 247 (414)
Q Consensus 220 l~~~ll~~-~l~er~~~~~~~gi~l~~~G 247 (414)
+-.++-+. +++|+.++..+..++++++.
T Consensus 262 lp~alaGlvffdap~nf~si~sillGfls 290 (309)
T COG5070 262 LPIALAGLVFFDAPVNFLSIFSILLGFLS 290 (309)
T ss_pred ChHHHhhhhhcCCchhHHHHHHHHHHHHH
Confidence 88888887 78999999998888776543
No 110
>PRK02237 hypothetical protein; Provisional
Probab=72.79 E-value=24 Score=28.72 Aligned_cols=46 Identities=24% Similarity=0.239 Sum_probs=38.4
Q ss_pred CChhHH-HHHhhhHHHHHHHHHHHHhcCCCchhhHHHHHHHHHhhhc
Q 015064 366 VSATET-AIIYGLEPLWGAGFAWFLLGERWSTAGWIGAALVLDVQIF 411 (414)
Q Consensus 366 ~~a~~~-s~~~~l~pv~a~l~~~~~lge~~s~~~~iG~~LIi~g~~l 411 (414)
....|+ +...-...+.++++++++-|++|+...++|..+.++|+.+
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~i 102 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAV 102 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHH
Confidence 334443 6777788899999999999999999999999999988753
No 111
>PRK02237 hypothetical protein; Provisional
Probab=72.78 E-value=25 Score=28.59 Aligned_cols=42 Identities=17% Similarity=0.169 Sum_probs=31.8
Q ss_pred HHHHhhHHHHHHHHHH-HhcccCchhHHHHHHHHHHhhhhhcc
Q 015064 212 SFISLFTVIVVPLFDG-MLGAIIPAHTWFGVLISALGVGMLEC 253 (414)
Q Consensus 212 ~~l~~~~Pl~~~ll~~-~l~er~~~~~~~gi~l~~~Gv~li~~ 253 (414)
+.......+...+-.+ +-|+|+++.+++|..++++|+.++..
T Consensus 63 AAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 63 AAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMY 105 (109)
T ss_pred HHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHhee
Confidence 3444455555555666 57999999999999999999988864
No 112
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=72.04 E-value=34 Score=33.76 Aligned_cols=139 Identities=13% Similarity=0.056 Sum_probs=78.7
Q ss_pred chhhHHHHHHHHHHHHHHHHHhHhhhccCCCCchhHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCcchhhhhccccch
Q 015064 259 SVGDFLNFLSAIFFGIHMLRTERISRSTKKENFLPLLGYEICVVALLSTIWVLVGGWFDSSQDFDQSPWTWTMLWDWMVT 338 (414)
Q Consensus 259 ~~G~llal~aa~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~ 338 (414)
..|.++-.+++++.+.+++=.||..+ .+....=..+.+++ .+..|........++..+. .+-.+.
T Consensus 6 i~Gii~h~iGg~~~~sfy~P~kkvk~----WsWEs~Wlv~gi~s-wli~P~~~a~l~ip~~~~i----------~~~~~~ 70 (344)
T PF06379_consen 6 ILGIIFHAIGGFASGSFYVPFKKVKG----WSWESYWLVQGIFS-WLIVPWLWALLAIPDFFSI----------YSATPA 70 (344)
T ss_pred HHHHHHHHHHHHHhhhhccchhhcCC----ccHHHHHHHHHHHH-HHHHHHHHHHHhCCcHHHH----------HHhCCh
Confidence 47889999999999999998888643 33333222222222 2333332222211111100 000111
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhccCChhHH-HHHhhhHHHHHHHHHHHHhc-------CCCchhhHHHHHHHHHhhh
Q 015064 339 FPWVPALYTGIFSTGICLWIEIAAMRDVSATET-AIIYGLEPLWGAGFAWFLLG-------ERWSTAGWIGAALVLDVQI 410 (414)
Q Consensus 339 ~~~~~ll~lgv~~~~~~~~l~~~al~~~~a~~~-s~~~~l~pv~a~l~~~~~lg-------e~~s~~~~iG~~LIi~g~~ 410 (414)
+.+......|+.= +++-..|-.++|+++.+.. ++..-+.-+++.++--++.| ++-....++|.++.++|+.
T Consensus 71 ~~l~~~~l~G~lW-GIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIa 149 (344)
T PF06379_consen 71 STLFWTFLFGVLW-GIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIA 149 (344)
T ss_pred hHHHHHHHHHHHH-hcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHH
Confidence 2244455566654 4566688889999988765 44445555666666555433 2234567889999999987
Q ss_pred ccc
Q 015064 411 FLP 413 (414)
Q Consensus 411 l~~ 413 (414)
+..
T Consensus 150 i~g 152 (344)
T PF06379_consen 150 ICG 152 (344)
T ss_pred HHh
Confidence 653
No 113
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=71.81 E-value=33 Score=31.27 Aligned_cols=21 Identities=19% Similarity=0.311 Sum_probs=12.5
Q ss_pred cccccccccccccchhhhhhh
Q 015064 52 NVTNQHSKTLHFTNLTHIIKN 72 (414)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~ 72 (414)
+.++++.+..-.|=.+|++.+
T Consensus 21 ~~~e~~~e~~L~eil~~Llea 41 (206)
T PF06570_consen 21 GVSEEEIEELLEEILPHLLEA 41 (206)
T ss_pred CCCHHHHHHHHHHHHHHHHHH
Confidence 344555556666666776655
No 114
>PRK09776 putative diguanylate cyclase; Provisional
Probab=70.26 E-value=2e+02 Score=32.93 Aligned_cols=23 Identities=0% Similarity=-0.128 Sum_probs=10.5
Q ss_pred hhHHHHHHHHHHHHHHHHHhHhh
Q 015064 261 GDFLNFLSAIFFGIHMLRTERIS 283 (414)
Q Consensus 261 G~llal~aa~~~al~~v~~~~~~ 283 (414)
..++++...+...+...+.++..
T Consensus 71 ~~~~~~~~~~~~~~~~~ll~~~~ 93 (1092)
T PRK09776 71 NLTWTTINLVEAVVGAVLLRKLL 93 (1092)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc
Confidence 33444444444444444455543
No 115
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=68.88 E-value=2.3 Score=40.40 Aligned_cols=115 Identities=10% Similarity=-0.031 Sum_probs=76.2
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCcchhhhhccccchhhHHHHHHHHHHHHHHHHHHHHHHhccCChh
Q 015064 290 NFLPLLGYEICVVALLSTIWVLVGGWFDSSQDFDQSPWTWTMLWDWMVTFPWVPALYTGIFSTGICLWIEIAAMRDVSAT 369 (414)
Q Consensus 290 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ll~lgv~~~~~~~~l~~~al~~~~a~ 369 (414)
.|..++++|.++...+...+.....--....+.+..+..... -.-++=+.++ ........+..+++++.+
T Consensus 60 ~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t---------~r~vlplsvV-fi~mI~fnnlcL~yVgVa 129 (347)
T KOG1442|consen 60 APLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLAT---------ARQVLPLSVV-FILMISFNNLCLKYVGVA 129 (347)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHH---------HHhhcchhhe-eeeehhccceehhhcceE
Confidence 367788889988888877665443221111111111111111 1112222222 223344567889999998
Q ss_pred HHHHHhhhHHHHHHHHHHHHhcCCCchhhHHHHHHHHHhhhcccC
Q 015064 370 ETAIIYGLEPLWGAGFAWFLLGERWSTAGWIGAALVLDVQIFLPR 414 (414)
Q Consensus 370 ~~s~~~~l~pv~a~l~~~~~lge~~s~~~~iG~~LIi~g~~l~~r 414 (414)
---+-..+..+|++++.+++++++-+..-..++++|+.|-.++.|
T Consensus 130 FYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvd 174 (347)
T KOG1442|consen 130 FYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVD 174 (347)
T ss_pred EEEeccchhhhHHHHhHHhhcccccccccceeehhheehheeccc
Confidence 888889999999999999999999999999999999999887754
No 116
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=66.72 E-value=23 Score=28.75 Aligned_cols=43 Identities=16% Similarity=0.270 Sum_probs=32.9
Q ss_pred HHHHhhHHHHHHHHHH-HhcccCchhHHHHHHHHHHhhhhhccc
Q 015064 212 SFISLFTVIVVPLFDG-MLGAIIPAHTWFGVLISALGVGMLECS 254 (414)
Q Consensus 212 ~~l~~~~Pl~~~ll~~-~l~er~~~~~~~gi~l~~~Gv~li~~~ 254 (414)
+.......+...+-.+ +-|+|+++.+++|..++++|+.++...
T Consensus 61 AAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 61 AAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred HHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 3444455555566666 579999999999999999999998753
No 117
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=64.61 E-value=13 Score=30.10 Aligned_cols=49 Identities=22% Similarity=0.286 Sum_probs=38.8
Q ss_pred hccCChhHH-HHHhhhHHHHHHHHHHHHhcCCCchhhHHHHHHHHHhhhc
Q 015064 363 MRDVSATET-AIIYGLEPLWGAGFAWFLLGERWSTAGWIGAALVLDVQIF 411 (414)
Q Consensus 363 l~~~~a~~~-s~~~~l~pv~a~l~~~~~lge~~s~~~~iG~~LIi~g~~l 411 (414)
++-....|+ +...-...+.++++++.+-|++|+...++|..+.++|+.+
T Consensus 51 l~p~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~i 100 (107)
T PF02694_consen 51 LQPAAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAI 100 (107)
T ss_pred cCcccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHh
Confidence 333444443 5566677888999999999999999999999999998764
No 118
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=64.40 E-value=50 Score=26.67 Aligned_cols=33 Identities=18% Similarity=0.214 Sum_probs=26.1
Q ss_pred HHHHHH-HhcccCchhHHHHHHHHHHhhhhhccc
Q 015064 222 VPLFDG-MLGAIIPAHTWFGVLISALGVGMLECS 254 (414)
Q Consensus 222 ~~ll~~-~l~er~~~~~~~gi~l~~~Gv~li~~~ 254 (414)
..+-.+ .-|.|+++.+++|..++++|+.++...
T Consensus 72 sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~ 105 (109)
T COG1742 72 SLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFG 105 (109)
T ss_pred HHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeC
Confidence 344444 358999999999999999999887754
No 119
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=60.46 E-value=97 Score=29.71 Aligned_cols=105 Identities=12% Similarity=0.050 Sum_probs=73.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHhcC-----------cchhhhHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHhhHH
Q 015064 151 MHPASFCAVRFVMSAIPFLPFVFWARD-----------DVKTRNAGIELGLWVSLGYFVEALGLLTSDAGRASFISLFTV 219 (414)
Q Consensus 151 ~~p~~~~~~R~~~a~l~ll~~~~~~~~-----------~~~~~~~~~~~gl~~~~~~~~~~~al~~~~~~~a~~l~~~~P 219 (414)
-+..+.++..+.++.+.++..+..... +.+.-...++.++.+.++...-..=++.-.+..++.+...--
T Consensus 218 ~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~~gylG~~~VLalI~~fGA~~aatvTTaRK 297 (367)
T KOG1582|consen 218 ASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSLAGYLGIVFVLALIKLFGALIAATVTTARK 297 (367)
T ss_pred CCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHHHhHhhHHHHHHHHHHhchhHHHHHHHhHh
Confidence 445678888888888888776655432 222333444445555555544444445556777777777777
Q ss_pred HHHHHHHH-HhcccCchhHHHHHHHHHHhhhhhcccC
Q 015064 220 IVVPLFDG-MLGAIIPAHTWFGVLISALGVGMLECSG 255 (414)
Q Consensus 220 l~~~ll~~-~l~er~~~~~~~gi~l~~~Gv~li~~~~ 255 (414)
-.+.++++ ++.++++.+..-+.++.+.|+++=..+.
T Consensus 298 avTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk 334 (367)
T KOG1582|consen 298 AVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSK 334 (367)
T ss_pred HHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccC
Confidence 88899998 6899999999999999999999966554
No 120
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=59.77 E-value=18 Score=30.94 Aligned_cols=42 Identities=10% Similarity=0.138 Sum_probs=31.3
Q ss_pred chhHHHHHHhhHHHHHHHHHHHhcccCchhHHHHHHHHHHhh
Q 015064 207 DAGRASFISLFTVIVVPLFDGMLGAIIPAHTWFGVLISALGV 248 (414)
Q Consensus 207 ~~~~a~~l~~~~Pl~~~ll~~~l~er~~~~~~~gi~l~~~Gv 248 (414)
+.-.++++.++.|+++.+++.++-+++...+.+.++.+++|.
T Consensus 73 slL~sA~LvYi~PL~~l~v~~~La~~L~~~e~~~~~~~~lg~ 114 (150)
T COG3086 73 SLLKSALLVYIFPLVGLFLGAILAQYLFFSELIVIFGAFLGL 114 (150)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 344577888899999999998877777777766666555554
No 121
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=53.09 E-value=1.8e+02 Score=26.41 Aligned_cols=14 Identities=7% Similarity=0.244 Sum_probs=7.3
Q ss_pred HHHHHHHHHHHHHH
Q 015064 343 PALYTGIFSTGICL 356 (414)
Q Consensus 343 ~ll~lgv~~~~~~~ 356 (414)
..+.+|++..++.+
T Consensus 182 ~~iiig~i~~~~~~ 195 (206)
T PF06570_consen 182 VYIIIGVIAFALRF 195 (206)
T ss_pred HHHHHHHHHHHHHH
Confidence 34456665555444
No 122
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=52.03 E-value=2.6 Score=40.53 Aligned_cols=108 Identities=9% Similarity=0.028 Sum_probs=65.9
Q ss_pred HHHHHHHHhhhHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHh----c------Cc---------chhhhHHHHHHH
Q 015064 130 LNVITIVYASDIPILKAAEEIMHPASFCAVRFVMSAIPFLPFVFWA----R------DD---------VKTRNAGIELGL 190 (414)
Q Consensus 130 ~lla~~~wg~~~~~~k~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~----~------~~---------~~~~~~~~~~gl 190 (414)
|+++.++||+.....|++.++--..+..++-+.++.++..+++... . +. ++.....++-|+
T Consensus 1 M~itmlcwGSW~nt~kL~~r~gR~~qh~Y~DYsig~lL~All~A~TlGs~G~~~~~g~~Fl~qL~Q~n~~sv~~A~aGGv 80 (336)
T PF07168_consen 1 MVITMLCWGSWPNTQKLAERRGRLPQHFYWDYSIGNLLAALLIAFTLGSIGESTPEGPNFLTQLSQANWPSVLFAMAGGV 80 (336)
T ss_pred CeeehhhhcChHHHHHHHHhcCCccceehhHHHHHHHHHHHHHHHhccccCCCCCCCccHHHHHhcCChHHHHHHHHhhH
Confidence 3567899999999999998754444556666766666555544332 1 10 111122334467
Q ss_pred HHHHHHHHHHHHHhhcchhHHHHHHhhHH-HHHHHHHHHhcccCchhH
Q 015064 191 WVSLGYFVEALGLLTSDAGRASFISLFTV-IVVPLFDGMLGAIIPAHT 237 (414)
Q Consensus 191 ~~~~~~~~~~~al~~~~~~~a~~l~~~~P-l~~~ll~~~l~er~~~~~ 237 (414)
...+++.+..+|+.+...+.+-.+..... ++..++-+++..|.++..
T Consensus 81 vfnlgNillq~aia~aGmSVafpvg~glalVlGv~~NYfld~~~n~a~ 128 (336)
T PF07168_consen 81 VFNLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNYFLDPKINRAE 128 (336)
T ss_pred hhhhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeeeeccCCCCCce
Confidence 77788999999999988887655553222 222223345566766543
No 123
>KOG2322 consensus N-methyl-D-aspartate receptor glutamate-binding subunit [Signal transduction mechanisms]
Probab=50.81 E-value=1.4e+02 Score=27.82 Aligned_cols=54 Identities=19% Similarity=0.076 Sum_probs=30.1
Q ss_pred hcccCchhHHHHHHHHHHhhhhhcc-----cCCCCchhhHHHHHHHHHHHHHHHHHhHh
Q 015064 229 LGAIIPAHTWFGVLISALGVGMLEC-----SGSPPSVGDFLNFLSAIFFGIHMLRTERI 282 (414)
Q Consensus 229 l~er~~~~~~~gi~l~~~Gv~li~~-----~~~~~~~G~llal~aa~~~al~~v~~~~~ 282 (414)
+.+|.......|.+.+...+.++.+ -......-.+.+.++|+.+..|.++.-..
T Consensus 159 ~qtK~DFt~~~~~l~~~l~vl~~~g~I~~~f~~~~~~~~vya~lgAllf~~yl~~Dtql 217 (237)
T KOG2322|consen 159 LQTKYDFTSLGGFLFALLIVLLLFGLIFLFFPYGPILVMVYAALGALLFCGYLVYDTQL 217 (237)
T ss_pred EeeccchhhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHhhhHH
Confidence 4666554444444444444444432 11223345567777888888888776654
No 124
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=50.23 E-value=2.2e+02 Score=31.65 Aligned_cols=45 Identities=20% Similarity=0.278 Sum_probs=29.5
Q ss_pred hhHHHHHHhhHHHHHHHHHHH-hcccCchhHHHHHHHHHHhhhhhc
Q 015064 208 AGRASFISLFTVIVVPLFDGM-LGAIIPAHTWFGVLISALGVGMLE 252 (414)
Q Consensus 208 ~~~a~~l~~~~Pl~~~ll~~~-l~er~~~~~~~gi~l~~~Gv~li~ 252 (414)
++.+.++..+.|.-.+.++.+ +.+|.+...+.+.+-.++|.+.+.
T Consensus 10 lgRa~il~~l~PFg~af~~a~~~~~~~~~~~~~~~~~~~~G~~t~~ 55 (764)
T TIGR02865 10 LGRAVIVSPMAPFGIAFLAAVLLAKKGGDKAFFSALGVLLGAISIQ 55 (764)
T ss_pred HhHHHHhcCCCchHHHHHHHHHHhhcccchHHHHHHHHHHHHHHhC
Confidence 356677888999988888874 455544444555555666665543
No 125
>PF04246 RseC_MucC: Positive regulator of sigma(E), RseC/MucC; InterPro: IPR007359 This bacterial family of integral membrane proteins represents a positive regulator of the sigma(E) transcription factor, namely RseC/MucC. The sigma(E) transcription factor is up-regulated by cell envelope protein misfolding, and regulates the expression of genes that are collectively termed ECF (devoted to Extra-Cellular Functions) []. In Pseudomonas aeruginosa, derepression of sigma(E) is associated with the alginate-overproducing phenotype characteristic of chronic respiratory tract colonization in cystic fibrosis patients. The mechanism by which RseC/MucC positively regulates the sigma(E) transcription factor is unknown. RseC is also thought to have a role in thiamine biosynthesis in Salmonella typhimurium []. In addition, this family also includes an N-terminal part of RnfF, a Rhodobacter capsulatus protein, of unknown function, that is essential for nitrogen fixation. This protein also contains a domain found in ApbE protein IPR003374 from INTERPRO, which is itself involved in thiamine biosynthesis.
Probab=49.52 E-value=28 Score=29.32 Aligned_cols=42 Identities=17% Similarity=0.350 Sum_probs=29.5
Q ss_pred chhHHHHHHhhHHHHHHHHHHHhcccCchhHHHHHHHHHHhh
Q 015064 207 DAGRASFISLFTVIVVPLFDGMLGAIIPAHTWFGVLISALGV 248 (414)
Q Consensus 207 ~~~~a~~l~~~~Pl~~~ll~~~l~er~~~~~~~gi~l~~~Gv 248 (414)
....++++.+..|++..+++.+++..+...+..+++.+++|.
T Consensus 66 ~~~~aa~l~Y~lPll~li~g~~l~~~~~~~e~~~~l~~l~~l 107 (135)
T PF04246_consen 66 SLLKAAFLVYLLPLLALIAGAVLGSYLGGSELWAILGGLLGL 107 (135)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344577888899999999888776666665666655555554
No 126
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=46.83 E-value=1.5e+02 Score=23.73 Aligned_cols=32 Identities=25% Similarity=0.233 Sum_probs=27.8
Q ss_pred HHHHHHHhcCCCchhhHHHHHHHHHhhhcccC
Q 015064 383 AGFAWFLLGERWSTAGWIGAALVLDVQIFLPR 414 (414)
Q Consensus 383 ~l~~~~~lge~~s~~~~iG~~LIi~g~~l~~r 414 (414)
+.++.+.++|++.+..+.|.+++.+|+.+.-|
T Consensus 84 v~Fsvfyl~epl~~~~l~a~~~i~gav~fiFr 115 (116)
T COG3169 84 VPFSVFYLKEPLRWNYLWAFLLILGAVYFIFR 115 (116)
T ss_pred HHHHHHHHcCcchHHHHHHHHHHHHHHHHhcc
Confidence 34688899999999999999999999887654
No 127
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=46.59 E-value=9.4 Score=36.88 Aligned_cols=84 Identities=15% Similarity=0.168 Sum_probs=49.7
Q ss_pred ccchHHHHHHHHHHHHHhhhHHHHHHhhhc--------CCHHHH--HHHHH-----HHHHHHHHHHHHHh-----c----
Q 015064 121 SKKIRSIFLLNVITIVYASDIPILKAAEEI--------MHPASF--CAVRF-----VMSAIPFLPFVFWA-----R---- 176 (414)
Q Consensus 121 ~~~~~g~l~~lla~~~wg~~~~~~k~~~~~--------~~p~~~--~~~R~-----~~a~l~ll~~~~~~-----~---- 176 (414)
+++..|+...+++.++++.-.+...++.++ +|++.+ .++-+ .++.++-..++++. |
T Consensus 215 ~~~~~Gl~i~~faG~c~slFSPafNlAtNDqwhtL~~gvP~L~VYtafFyFs~s~fv~~~~lni~~Ly~P~~g~p~Ssl~ 294 (336)
T PF07168_consen 215 SSTLIGLGIAFFAGLCFSLFSPAFNLATNDQWHTLKPGVPHLVVYTAFFYFSLSCFVVAIILNIWFLYRPVLGVPKSSLK 294 (336)
T ss_pred ccceeeehHHHHHhHHHHhcCchhhccccccccccCCCCCceEEEeehHHHHHHHHHHHHHHHhhheeccccCCChhhHH
Confidence 455679999999999999999988877642 343322 12222 22222222222221 1
Q ss_pred ---CcchhhhHHHHHHHHHHHHHHHHHHHHh
Q 015064 177 ---DDVKTRNAGIELGLWVSLGYFVEALGLL 204 (414)
Q Consensus 177 ---~~~~~~~~~~~~gl~~~~~~~~~~~al~ 204 (414)
++++.|.+.++.|++..+++.+.|.+=|
T Consensus 295 ay~~D~~gR~wa~lAG~lCg~GNglQFmgGQ 325 (336)
T PF07168_consen 295 AYLKDWNGRGWAFLAGLLCGFGNGLQFMGGQ 325 (336)
T ss_pred HHhhccCCccHHHHHHHHHhCCceeeecccc
Confidence 1234456777888888888877776544
No 128
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=45.83 E-value=3.4e+02 Score=27.54 Aligned_cols=110 Identities=14% Similarity=0.090 Sum_probs=66.7
Q ss_pred hcchhHHHHHHhhHHHHHHHHHH---HhcccCchhHHHHHH--HHHHhhhhhcccCC-C-Cchh-hHHHHHHHHHHHHHH
Q 015064 205 TSDAGRASFISLFTVIVVPLFDG---MLGAIIPAHTWFGVL--ISALGVGMLECSGS-P-PSVG-DFLNFLSAIFFGIHM 276 (414)
Q Consensus 205 ~~~~~~a~~l~~~~Pl~~~ll~~---~l~er~~~~~~~gi~--l~~~Gv~li~~~~~-~-~~~G-~llal~aa~~~al~~ 276 (414)
.++.+.+..+...+-+.+.+-+. .+-.|++|++.+-.. +-.+|-++.....+ . ...| .+.++..+..|++..
T Consensus 44 ~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~ 123 (394)
T COG2814 44 GVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAA 123 (394)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46667777777777777777665 256788877643322 23333333333222 1 1122 356677888888888
Q ss_pred HHHhHhhhccCCCCchhHHHHHHHHHHHHHHHHHHHhc
Q 015064 277 LRTERISRSTKKENFLPLLGYEICVVALLSTIWVLVGG 314 (414)
Q Consensus 277 v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 314 (414)
....++..+.+.-..+.+.+....++.++..|+....+
T Consensus 124 ~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig 161 (394)
T COG2814 124 ALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLG 161 (394)
T ss_pred HHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHH
Confidence 88877765544345566666666777777777766654
No 129
>COG2917 Intracellular septation protein A [Cell division and chromosome partitioning]
Probab=45.17 E-value=2.2e+02 Score=25.26 Aligned_cols=87 Identities=8% Similarity=-0.016 Sum_probs=50.6
Q ss_pred HHHHHHHHHHhhcchhHHHHHHhhHHHHHHHHHHHhcccCchhHH-HHHHHHHHhhhhhcccCCCC---chhhHHHHHHH
Q 015064 194 LGYFVEALGLLTSDAGRASFISLFTVIVVPLFDGMLGAIIPAHTW-FGVLISALGVGMLECSGSPP---SVGDFLNFLSA 269 (414)
Q Consensus 194 ~~~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~~l~er~~~~~~-~gi~l~~~Gv~li~~~~~~~---~~G~llal~aa 269 (414)
+....++.+....+.-.|+...-...+...++.++..+|+.+.++ -++.+.+.|..-+...++.+ ..-++..+.|.
T Consensus 8 ~Pli~FF~~yk~~~I~~AT~~livAt~i~l~~~w~~~rkv~km~l~s~~~v~vFG~lTl~f~~d~FIKwK~TIi~~lFa~ 87 (180)
T COG2917 8 GPLILFFAAYKVYGIYAATAVLIVATVIQLAILWIKYRKVEKMQLISGVVVVVFGGLTLIFHNDTFIKWKPTIIYWLFAL 87 (180)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhchhHhhccCcceEEeeHHHHHHHHHH
Confidence 344555566666565556555555556666666777777887664 44455556666555555543 34556666666
Q ss_pred HHHHHHHHHHh
Q 015064 270 IFFGIHMLRTE 280 (414)
Q Consensus 270 ~~~al~~v~~~ 280 (414)
+..+-..+..|
T Consensus 88 ~Llgs~~~~~k 98 (180)
T COG2917 88 VLLGSQFLFKK 98 (180)
T ss_pred HHHHHHHHhcC
Confidence 66554444443
No 130
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=44.69 E-value=25 Score=33.33 Aligned_cols=133 Identities=14% Similarity=0.033 Sum_probs=84.9
Q ss_pred ccchHHHHHHHHHHHHHhhhHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHhcCcchhhhHHHHHHHH-HHHHHHHH
Q 015064 121 SKKIRSIFLLNVITIVYASDIPILKAAEEIMHPASFCAVRFVMSAIPFLPFVFWARDDVKTRNAGIELGLW-VSLGYFVE 199 (414)
Q Consensus 121 ~~~~~g~l~~lla~~~wg~~~~~~k~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~gl~-~~~~~~~~ 199 (414)
+++.+|-.+++.++.+++.+++.-....+..+-.++...--++++++-.+=+...+.......|-...+.. .+.-..+.
T Consensus 162 snp~~GD~lvi~GATlYaVSNv~EEflvkn~d~~elm~~lgLfGaIIsaIQ~i~~~~~~~tl~w~~~i~~yl~f~L~MFl 241 (336)
T KOG2766|consen 162 SNPVKGDFLVIAGATLYAVSNVSEEFLVKNADRVELMGFLGLFGAIISAIQFIFERHHVSTLHWDSAIFLYLRFALTMFL 241 (336)
T ss_pred CCCccCcEEEEecceeeeeccccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhhhccceeeEeehHHHHHHHHHHHHHHH
Confidence 45678888999999999999999999999999999988888888888776555555554444332222211 12112223
Q ss_pred HHHHh-----hcchhHHHHHHhhHHHHHHHHHHHhcccCchhHHHHHHHHHHhhhhhccc
Q 015064 200 ALGLL-----TSDAGRASFISLFTVIVVPLFDGMLGAIIPAHTWFGVLISALGVGMLECS 254 (414)
Q Consensus 200 ~~al~-----~~~~~~a~~l~~~~Pl~~~ll~~~l~er~~~~~~~gi~l~~~Gv~li~~~ 254 (414)
+|++. ..+++...+-.-++-++..++ ..++-++.+.-.++......|.++-...
T Consensus 242 lYsl~pil~k~~~aT~~nlslLTsDmwsl~i-~~FgYhv~wLY~laF~~i~~GliiYs~r 300 (336)
T KOG2766|consen 242 LYSLAPILIKTNSATMFNLSLLTSDMWSLLI-RTFGYHVDWLYFLAFATIATGLIIYSTR 300 (336)
T ss_pred HHHhhHHheecCCceEEEhhHhHHHHHHHHH-HHHhcchhhhhHHHHHHHHHhhEEeecc
Confidence 33333 233332222222333333333 5577779999999999999998876543
No 131
>TIGR00997 ispZ intracellular septation protein A. This partially characterized protein, whose absence can cause a cell division defect in an intracellularly replicating bacterium, is found only so far only in the Proteobacteria.
Probab=43.11 E-value=2.4e+02 Score=25.13 Aligned_cols=59 Identities=10% Similarity=0.066 Sum_probs=31.0
Q ss_pred HHHHHHHHhhcchhHHHHHHhhHHHHHHHHHHHhcccCchhHHHH--HHHHHHhhhhhccc
Q 015064 196 YFVEALGLLTSDAGRASFISLFTVIVVPLFDGMLGAIIPAHTWFG--VLISALGVGMLECS 254 (414)
Q Consensus 196 ~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~~l~er~~~~~~~g--i~l~~~Gv~li~~~ 254 (414)
...++.+.++.+.-.|+.......+......++.++|+++.+++. +++.+.|..+...+
T Consensus 10 li~Ff~~y~~~~I~~AT~~~~vat~~~~~~~~~~~~~v~~m~~is~~lv~vFGglTl~~~d 70 (178)
T TIGR00997 10 LIVFFATYKMTGIFAATIALLVATIIAIGLSYVKYKKVEKMQWISFVLIVVFGGLTLIFHD 70 (178)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHHHHHHhCC
Confidence 344455555444444444444444445555556778999987543 33344455444433
No 132
>PRK11715 inner membrane protein; Provisional
Probab=42.91 E-value=3.9e+02 Score=27.47 Aligned_cols=78 Identities=13% Similarity=-0.025 Sum_probs=40.4
Q ss_pred CcchhhhHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHhhHHHHHHH--HHHHhcccCchhHHHHHHHHHHhhhhhccc
Q 015064 177 DDVKTRNAGIELGLWVSLGYFVEALGLLTSDAGRASFISLFTVIVVPL--FDGMLGAIIPAHTWFGVLISALGVGMLECS 254 (414)
Q Consensus 177 ~~~~~~~~~~~~gl~~~~~~~~~~~al~~~~~~~a~~l~~~~Pl~~~l--l~~~l~er~~~~~~~gi~l~~~Gv~li~~~ 254 (414)
+.+-++-.+++.|+...+.+.+...==+|++-..|=++....++...- ++.++|.+-...-..+.+.++-|+...+..
T Consensus 326 ~~~iHpiQYlLVGlAl~lFYLLLLSlSEHigF~~AYliAa~a~v~li~~Y~~~vl~~~k~g~~~~~~L~~LYg~Ly~lLq 405 (436)
T PRK11715 326 KLRIHPVQYLLVGLALVLFYLLLLSLSEHIGFTLAYLIAALACVLLIGFYLSAVLRSWKRGLLFAAALAALYGVLYGLLQ 405 (436)
T ss_pred CceecHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHH
Confidence 334455566777776665554433333455555555555444432222 222566655555566666666666655543
No 133
>PRK10862 SoxR reducing system protein RseC; Provisional
Probab=42.53 E-value=34 Score=29.78 Aligned_cols=25 Identities=16% Similarity=0.149 Sum_probs=17.6
Q ss_pred chhHHHHHHhhHHHHHHHHHHHhcc
Q 015064 207 DAGRASFISLFTVIVVPLFDGMLGA 231 (414)
Q Consensus 207 ~~~~a~~l~~~~Pl~~~ll~~~l~e 231 (414)
+.-.++++.++.|++..+++..+++
T Consensus 73 ~llkaa~lvYllPLl~li~ga~l~~ 97 (154)
T PRK10862 73 SLLRSALLVYMTPLVGLFLGAALFQ 97 (154)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445677888899998888765444
No 134
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=41.54 E-value=8.7 Score=36.58 Aligned_cols=74 Identities=11% Similarity=0.113 Sum_probs=0.0
Q ss_pred HHHHHHHHHHH-hhcchhHHHHHHhhHHHHHHHHHH--HhcccCc-hhHHHHHHHHHHhhhhhc---ccCCCCchhhHHH
Q 015064 193 SLGYFVEALGL-LTSDAGRASFISLFTVIVVPLFDG--MLGAIIP-AHTWFGVLISALGVGMLE---CSGSPPSVGDFLN 265 (414)
Q Consensus 193 ~~~~~~~~~al-~~~~~~~a~~l~~~~Pl~~~ll~~--~l~er~~-~~~~~gi~l~~~Gv~li~---~~~~~~~~G~lla 265 (414)
.++..++++=+ +-.+-+..+++.+...++++++-. ++|+|+- +.-.+.+++.++-+.+.. ..+.....|.++.
T Consensus 33 l~ail~w~~iimsd~t~~a~~vl~sfAvvliiIIiIImlF~RrLLCPLGlLCiilimi~lLv~~L~tLtGQ~LF~Gi~~l 112 (381)
T PF05297_consen 33 LVAILVWFFIIMSDLTQGALTVLYSFAVVLIIIIIIIMLFKRRLLCPLGLLCIILIMIVLLVSMLWTLTGQTLFVGIVIL 112 (381)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHHHHHhhccHHHHHHHHH
Confidence 34444443332 233333344455444444444433 4666543 455555555544443332 2344444565443
Q ss_pred H
Q 015064 266 F 266 (414)
Q Consensus 266 l 266 (414)
+
T Consensus 113 ~ 113 (381)
T PF05297_consen 113 F 113 (381)
T ss_dssp -
T ss_pred H
Confidence 3
No 135
>PF09656 PGPGW: Putative transmembrane protein (PGPGW); InterPro: IPR019099 This entry represents proteins that contain three predicted transmembrane helices and an unusual motif with consensus sequence PGPGW.
Probab=38.37 E-value=1.3e+02 Score=21.27 Aligned_cols=46 Identities=22% Similarity=0.339 Sum_probs=35.9
Q ss_pred hHHHHHHHHHHhhhhhcccCCCCchhhHHHHHHHHHHHHHHHHHhHhhhc
Q 015064 236 HTWFGVLISALGVGMLECSGSPPSVGDFLNFLSAIFFGIHMLRTERISRS 285 (414)
Q Consensus 236 ~~~~gi~l~~~Gv~li~~~~~~~~~G~llal~aa~~~al~~v~~~~~~~~ 285 (414)
...+|..+.++|++++..|+. |.+..+++-...+-.+...|+..+.
T Consensus 4 v~v~G~~lv~~Gii~~~lPGp----G~l~i~~GL~iLa~ef~wArr~l~~ 49 (53)
T PF09656_consen 4 VGVLGWVLVVAGIIMLPLPGP----GLLVIFLGLAILATEFPWARRLLRR 49 (53)
T ss_pred hhhHHHHHHHHHHHhhcCCCC----cHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 357888999999999988863 6677777778888888887776554
No 136
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=36.49 E-value=4.9e+02 Score=26.73 Aligned_cols=56 Identities=13% Similarity=0.110 Sum_probs=25.5
Q ss_pred HHHHhccCChhHHHHHhhhHHHHHHHHHHHHhcCCCchhhHHHHHHHHHhhhcccC
Q 015064 359 EIAAMRDVSATETAIIYGLEPLWGAGFAWFLLGERWSTAGWIGAALVLDVQIFLPR 414 (414)
Q Consensus 359 ~~~al~~~~a~~~s~~~~l~pv~a~l~~~~~lge~~s~~~~iG~~LIi~g~~l~~r 414 (414)
|..++-+-.-.-......+.-+.++++..+-..+-==..--+|..++++.+++.+|
T Consensus 369 Y~~~vl~~~k~~~~~~~~L~~LY~~Ly~lLq~EdyALL~GSl~LF~iLa~vM~~TR 424 (430)
T PF06123_consen 369 YLSSVLKSWKRGLIFAGLLAALYGFLYVLLQSEDYALLMGSLLLFIILALVMYLTR 424 (430)
T ss_pred HHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHheee
Confidence 33343333333334444445555555555433333222333445555555555554
No 137
>PF09852 DUF2079: Predicted membrane protein (DUF2079); InterPro: IPR018650 This entry is represented by Sulfolobus virus STSV1, Orf64. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This entry contains a family of various integral membrane proteins with no known function.
Probab=34.30 E-value=5.3e+02 Score=26.43 Aligned_cols=41 Identities=20% Similarity=0.292 Sum_probs=21.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcCcchhhhHHHHHHHHH
Q 015064 152 HPASFCAVRFVMSAIPFLPFVFWARDDVKTRNAGIELGLWV 192 (414)
Q Consensus 152 ~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~gl~~ 192 (414)
+|..+.....+.-++...++.+.-|+.....+..+..++..
T Consensus 58 s~~tLli~Qal~la~~~~pl~~lar~~~~~~~~a~~~~~~y 98 (449)
T PF09852_consen 58 SPLTLLIVQALLLALGAIPLYRLARRRLLSRRLALLIALAY 98 (449)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHH
Confidence 46677777766666666655544333332334344444433
No 138
>COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog) [Signal transduction mechanisms]
Probab=32.21 E-value=2.9e+02 Score=24.29 Aligned_cols=55 Identities=11% Similarity=0.007 Sum_probs=38.9
Q ss_pred HHHHHHHHhccCChhHHHHHhh-hHHHHHHHHHHHHhcC-CCchhhHHHHHHHHHhhh
Q 015064 355 CLWIEIAAMRDVSATETAIIYG-LEPLWGAGFAWFLLGE-RWSTAGWIGAALVLDVQI 410 (414)
Q Consensus 355 ~~~l~~~al~~~~a~~~s~~~~-l~pv~a~l~~~~~lge-~~s~~~~iG~~LIi~g~~ 410 (414)
++..|.+.-.... ++.....| ++-+....+..+++++ ++....++++.+-+...+
T Consensus 64 a~lvW~~~~~~~~-~~~~~~ly~~ql~ln~awspiff~l~~l~~a~i~~lll~~~vl~ 120 (161)
T COG3476 64 AYLVWEKGPGQGT-SWLLMFLYLLQLILNFAWSPIFFGLRSLGAALIIILLLWIAVLV 120 (161)
T ss_pred HHHHHHHcCCCch-hHHHHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHH
Confidence 5656666555444 55555555 8999999999999998 688888877776555444
No 139
>PF04474 DUF554: Protein of unknown function (DUF554); InterPro: IPR007563 This is a family of uncharacterised prokaryotic proteins. Multiple predicted transmembrane regions suggest that the protein is membrane associated.
Probab=31.82 E-value=4.3e+02 Score=24.61 Aligned_cols=45 Identities=22% Similarity=0.389 Sum_probs=31.8
Q ss_pred HHHHhhHHHHHHHHHHHhcccCch------hHHHHHHHHHHhhhhhcccCC
Q 015064 212 SFISLFTVIVVPLFDGMLGAIIPA------HTWFGVLISALGVGMLECSGS 256 (414)
Q Consensus 212 ~~l~~~~Pl~~~ll~~~l~er~~~------~~~~gi~l~~~Gv~li~~~~~ 256 (414)
++++...-+...+++.++|+|++. .+.+|+.....|+-.....++
T Consensus 4 tiiN~~aIl~G~~iG~~~~~~i~~~~~~~l~~~~Gl~~l~iGi~~~~~~~~ 54 (226)
T PF04474_consen 4 TIINALAILLGGLIGLLLGRRIPERIKDTLMQALGLCVLAIGISMALKGQN 54 (226)
T ss_pred hHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhhHHHHHHHHHHHHccCc
Confidence 455566666777778888877775 357788888888887776543
No 140
>CHL00045 ccsA cytochrome c biogenesis protein
Probab=31.44 E-value=5.1e+02 Score=25.37 Aligned_cols=21 Identities=5% Similarity=-0.148 Sum_probs=10.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHh
Q 015064 260 VGDFLNFLSAIFFGIHMLRTE 280 (414)
Q Consensus 260 ~G~llal~aa~~~al~~v~~~ 280 (414)
.++....+|++...+|.+..|
T Consensus 146 lsYa~f~la~~~a~lyL~~~~ 166 (319)
T CHL00045 146 LSYAALLCGSLLSIALLVITF 166 (319)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 344445555555555555544
No 141
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=30.17 E-value=2.4e+02 Score=22.90 Aligned_cols=40 Identities=28% Similarity=0.356 Sum_probs=34.0
Q ss_pred HHHhhhHHHHHHHHHHHHhcCCCchhhHHHHHHHHHhhhc
Q 015064 372 AIIYGLEPLWGAGFAWFLLGERWSTAGWIGAALVLDVQIF 411 (414)
Q Consensus 372 s~~~~l~pv~a~l~~~~~lge~~s~~~~iG~~LIi~g~~l 411 (414)
+...-...+.++++++++=|.+|+...++|..+-++|..+
T Consensus 62 AAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~v 101 (109)
T COG1742 62 AAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAV 101 (109)
T ss_pred HHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceee
Confidence 5566777888999999999999999999998888877543
No 142
>COG4657 RnfA Predicted NADH:ubiquinone oxidoreductase, subunit RnfA [Energy production and conversion]
Probab=29.68 E-value=3.9e+02 Score=23.53 Aligned_cols=81 Identities=16% Similarity=0.189 Sum_probs=54.5
Q ss_pred cccCchhHHHHHHH-------HHHhhhhhccc-CCCCchhhHHHHHHHHHHHHHHHHHhHhhhccCCC---CchhHHHHH
Q 015064 230 GAIIPAHTWFGVLI-------SALGVGMLECS-GSPPSVGDFLNFLSAIFFGIHMLRTERISRSTKKE---NFLPLLGYE 298 (414)
Q Consensus 230 ~er~~~~~~~gi~l-------~~~Gv~li~~~-~~~~~~G~llal~aa~~~al~~v~~~~~~~~~~~~---~~~~~~~~~ 298 (414)
|..++..+.+|+.+ +++|+.++... +..+......++.++++|++..++..-.+++.+-. .+.--..+.
T Consensus 94 KtsP~LYr~LGIfLPLITTNCaVLgvaLln~~~~~~f~qsv~~gf~a~lGfslvmvlfA~iRER~~~advP~~frG~~ia 173 (193)
T COG4657 94 KTSPTLYRLLGIFLPLITTNCAVLGVALLNINEGHNFLQSVVYGFGAALGFSLVMVLFAAIRERLALADVPAPFRGAAIA 173 (193)
T ss_pred ccCHHHHHHHHHhhhhHhhchHHHHHHHHHhhhhhhHHHHHHHHhhhHhhHHHHHHHHHHHHHHHHHhcCCCCCCCcchH
Confidence 55666788888886 67899888765 34567788999999999999998887666553211 122233444
Q ss_pred HHHHHHHHHHHH
Q 015064 299 ICVVALLSTIWV 310 (414)
Q Consensus 299 ~~~~~v~~~~~~ 310 (414)
+..+++..+.++
T Consensus 174 litagLmSlaFm 185 (193)
T COG4657 174 LITAGLMSLAFM 185 (193)
T ss_pred HHHHHHHHHHHc
Confidence 556666655543
No 143
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=28.37 E-value=6.7e+02 Score=25.78 Aligned_cols=74 Identities=15% Similarity=0.041 Sum_probs=32.4
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHhhHHHH--HHHHHHHhcccCchhHHHHHHHHHHhhhhhcc
Q 015064 180 KTRNAGIELGLWVSLGYFVEALGLLTSDAGRASFISLFTVIV--VPLFDGMLGAIIPAHTWFGVLISALGVGMLEC 253 (414)
Q Consensus 180 ~~~~~~~~~gl~~~~~~~~~~~al~~~~~~~a~~l~~~~Pl~--~~ll~~~l~er~~~~~~~gi~l~~~Gv~li~~ 253 (414)
-++-.+++.|+...+.+.+...==+|++-..|=++.....+. +.-.+.++|.+-...-+.+++.++-|++.++.
T Consensus 323 iHpiQY~LVGlAl~lFYlLLLSlSEhi~F~~AYliAa~a~i~Li~~Y~~~vl~~~k~~~~~~~~L~~LY~~Ly~lL 398 (430)
T PF06123_consen 323 IHPIQYLLVGLALVLFYLLLLSLSEHIGFNLAYLIAALACIGLISLYLSSVLKSWKRGLIFAGLLAALYGFLYVLL 398 (430)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHH
Confidence 344455555665554443322222344444433333332221 11122256655555555555555555555443
No 144
>TIGR03644 marine_trans_1 probable ammonium transporter, marine subtype. Members of this protein family are well conserved subclass of putative ammonimum transporters, belonging to the much broader set of ammonium/methylammonium transporter described by TIGR00836. Species with this transporter tend to be marine bacteria. Partial phylogenetic profiling (PPP) picks a member of this protein family as the single best-scoring protein vs. a reference profile for the marine environment Genome Property for a large number of different query genomes. This finding by PPP suggests that this transporter family represents an important adaptation to the marine environment.
Probab=28.00 E-value=6.6e+02 Score=25.57 Aligned_cols=64 Identities=19% Similarity=0.245 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHHHH--HHHhccCChhHHHHHhhhHHHHHHHHHHHHhcCCCchhhHHHHHHHHH
Q 015064 344 ALYTGIFSTGICLWIE--IAAMRDVSATETAIIYGLEPLWGAGFAWFLLGERWSTAGWIGAALVLD 407 (414)
Q Consensus 344 ll~lgv~~~~~~~~l~--~~al~~~~a~~~s~~~~l~pv~a~l~~~~~lge~~s~~~~iG~~LIi~ 407 (414)
.+.+|+++..+.+... .+-+|.-++..+-.+=..-=+++.+..-++-++..=..|++|.+.+++
T Consensus 296 A~iiG~iag~v~~~~~~~~~~~~iDD~~~~~~vHg~~Gi~G~i~~glf~~~~~l~~Ql~g~~~~~~ 361 (404)
T TIGR03644 296 ATLIGAVGGVIVVFSIVLLDKLKIDDPVGAISVHGVAGIWGTLVVPITNGDASFGAQLIGAATIFA 361 (404)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCCcCchHhhhHHHHHHHHHHHHhccchHHHHHHHHHHHHHH
Confidence 3445666655554333 222444566555555444445555544444333334457888776653
No 145
>PRK11715 inner membrane protein; Provisional
Probab=26.89 E-value=7.1e+02 Score=25.63 Aligned_cols=14 Identities=36% Similarity=0.396 Sum_probs=6.2
Q ss_pred HHHHHHHhhhcccC
Q 015064 401 GAALVLDVQIFLPR 414 (414)
Q Consensus 401 G~~LIi~g~~l~~r 414 (414)
+..++++.+++.+|
T Consensus 417 lLF~~La~vM~~TR 430 (436)
T PRK11715 417 LLFAVLALVMFLTR 430 (436)
T ss_pred HHHHHHHHHHheee
Confidence 34444444444443
No 146
>PF12811 BaxI_1: Bax inhibitor 1 like ; InterPro: IPR010539 Bax inhibitor-1 (BI1) family contains six known genes in human. Some members of BI1 family have been proved to play important roles in cell death [, ].
Probab=26.69 E-value=5.8e+02 Score=24.50 Aligned_cols=50 Identities=12% Similarity=0.210 Sum_probs=22.8
Q ss_pred chhhHHHHHHHHHHHHHHH----HHhHhhhccCCCCchhHHHHHHHHHHHHHHHHHHH
Q 015064 259 SVGDFLNFLSAIFFGIHML----RTERISRSTKKENFLPLLGYEICVVALLSTIWVLV 312 (414)
Q Consensus 259 ~~G~llal~aa~~~al~~v----~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 312 (414)
..|..+.+.+....++..+ ..++..+..-| .-.-|....+..+.+.+..+
T Consensus 209 plgI~~slv~v~iAa~sLllDFd~Ie~~v~~gaP----k~~eW~~AfGL~vTLVWLYl 262 (274)
T PF12811_consen 209 PLGIGFSLVVVGIAALSLLLDFDFIEQGVRQGAP----KKMEWYAAFGLLVTLVWLYL 262 (274)
T ss_pred hHHHHHHHHHHHHHHHHHHhhHHHHHHHHHcCCC----hhhHHHHHHHHHHHHHHHHH
Confidence 3555555554444444443 33343332111 12445566666666555443
No 147
>KOG3817 consensus Uncharacterized conserved protein [Function unknown]
Probab=26.48 E-value=3.2e+02 Score=27.29 Aligned_cols=80 Identities=10% Similarity=0.142 Sum_probs=43.2
Q ss_pred HhhhHHHHHHhhhcCCHHHHHHHHHHHHHHHH-----HHHHHHhcCcchhhhHHHHHHHHHHHHHHHHHHHHhhcchhHH
Q 015064 137 YASDIPILKAAEEIMHPASFCAVRFVMSAIPF-----LPFVFWARDDVKTRNAGIELGLWVSLGYFVEALGLLTSDAGRA 211 (414)
Q Consensus 137 wg~~~~~~k~~~~~~~p~~~~~~R~~~a~l~l-----l~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~al~~~~~~~a 211 (414)
|+.+.-..|.+.+++.-..+-..-++++-++. ..++.+..++...+-.-++.=.+..++..+.|.+.++..++.|
T Consensus 201 Ws~slY~i~ql~~nLq~Iwieyr~yvLgYvlivgliSfaVCYK~GPp~d~RS~~ilmWtLqli~lvl~Yfsvq~p~~a~A 280 (452)
T KOG3817|consen 201 WSISLYVIKQLADNLQLIWIEYRDYVLGYVLIVGLISFAVCYKIGPPKDPRSQTILMWTLQLIGLVLAYFSVQHPSAAIA 280 (452)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCcchhhHHHHHHHHHHHHHHHHhcccHHHHHH
Confidence 45555566666665555555554444443332 2233333333333333344334455666777888888888776
Q ss_pred HHHHh
Q 015064 212 SFISL 216 (414)
Q Consensus 212 ~~l~~ 216 (414)
.+|..
T Consensus 281 ~iI~~ 285 (452)
T KOG3817|consen 281 AIIMV 285 (452)
T ss_pred HHHHH
Confidence 66553
No 148
>TIGR03144 cytochr_II_ccsB cytochrome c-type biogenesis protein CcsB. Members of this protein family represent one of two essential proteins of system II for c-type cytochrome biogenesis. Additional proteins tend to be part of the system but can be replaced by chemical reductants such as dithiothreitol. This protein is designated CcsB in Bordetella pertussis and some other bacteria, resC in Bacillus (where there is additional N-terminal sequence), and CcsA in chloroplast. We use the CcsB designation here. Member sequences show regions of strong sequence conservation and variable-length, poorly conserved regions in between; sparsely filled columns were removed from the seed alignment prior to model construction.
Probab=24.04 E-value=5.9e+02 Score=23.66 Aligned_cols=24 Identities=8% Similarity=0.097 Sum_probs=12.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHhHhh
Q 015064 260 VGDFLNFLSAIFFGIHMLRTERIS 283 (414)
Q Consensus 260 ~G~llal~aa~~~al~~v~~~~~~ 283 (414)
.|+....++++...+|.+..|++.
T Consensus 102 l~ya~~~la~~~a~lyL~~~~~lk 125 (243)
T TIGR03144 102 LSYAALLVGSLLSIAYLLKTRKQN 125 (243)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhh
Confidence 445555555555555655555543
No 149
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=23.94 E-value=1.5e+02 Score=25.47 Aligned_cols=29 Identities=21% Similarity=0.237 Sum_probs=21.8
Q ss_pred HhccCChhHHHHHhhhHHHHHHHHHHHHh
Q 015064 362 AMRDVSATETAIIYGLEPLWGAGFAWFLL 390 (414)
Q Consensus 362 al~~~~a~~~s~~~~l~pv~a~l~~~~~l 390 (414)
++..-+.-+.+.+.|+.|++.++++.+++
T Consensus 68 Gi~EkslL~sA~LvYi~PL~~l~v~~~La 96 (150)
T COG3086 68 GIEEKSLLKSALLVYIFPLVGLFLGAILA 96 (150)
T ss_pred ccCcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556677888889999998888777653
No 150
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=23.70 E-value=64 Score=26.17 Aligned_cols=55 Identities=13% Similarity=0.032 Sum_probs=40.3
Q ss_pred HHHHHHhccCChhHHHHHh-hhHHHHHHHHHHHHhcCCCchhhHHHHHHHHHhhhc
Q 015064 357 WIEIAAMRDVSATETAIIY-GLEPLWGAGFAWFLLGERWSTAGWIGAALVLDVQIF 411 (414)
Q Consensus 357 ~l~~~al~~~~a~~~s~~~-~l~pv~a~l~~~~~lge~~s~~~~iG~~LIi~g~~l 411 (414)
.+|+.-+++.+-+.+.++. .+.-.++.++|..+-.|......+.|..+++.|+.+
T Consensus 67 aly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~L 122 (125)
T KOG4831|consen 67 ALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWL 122 (125)
T ss_pred HHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhh
Confidence 3556667777777776654 456677788898754555677788999999999876
No 151
>PF04246 RseC_MucC: Positive regulator of sigma(E), RseC/MucC; InterPro: IPR007359 This bacterial family of integral membrane proteins represents a positive regulator of the sigma(E) transcription factor, namely RseC/MucC. The sigma(E) transcription factor is up-regulated by cell envelope protein misfolding, and regulates the expression of genes that are collectively termed ECF (devoted to Extra-Cellular Functions) []. In Pseudomonas aeruginosa, derepression of sigma(E) is associated with the alginate-overproducing phenotype characteristic of chronic respiratory tract colonization in cystic fibrosis patients. The mechanism by which RseC/MucC positively regulates the sigma(E) transcription factor is unknown. RseC is also thought to have a role in thiamine biosynthesis in Salmonella typhimurium []. In addition, this family also includes an N-terminal part of RnfF, a Rhodobacter capsulatus protein, of unknown function, that is essential for nitrogen fixation. This protein also contains a domain found in ApbE protein IPR003374 from INTERPRO, which is itself involved in thiamine biosynthesis.
Probab=23.16 E-value=93 Score=26.10 Aligned_cols=25 Identities=24% Similarity=0.134 Sum_probs=17.1
Q ss_pred cCChhHHHHHhhhHHHHHHHHHHHH
Q 015064 365 DVSATETAIIYGLEPLWGAGFAWFL 389 (414)
Q Consensus 365 ~~~a~~~s~~~~l~pv~a~l~~~~~ 389 (414)
.-...+++.+.|+-|++.++.+.++
T Consensus 64 ~~~~~~aa~l~Y~lPll~li~g~~l 88 (135)
T PF04246_consen 64 ESSLLKAAFLVYLLPLLALIAGAVL 88 (135)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344567777888888887777653
No 152
>COG3201 PnuC Nicotinamide mononucleotide transporter [Coenzyme metabolism]
Probab=22.16 E-value=6.4e+02 Score=23.38 Aligned_cols=138 Identities=11% Similarity=0.074 Sum_probs=68.7
Q ss_pred hcccCchhHHHHHHHHHHhhhhhcccCCCCchhhHHHHHHHHHHHHHHHHHhHhhhccCCCCchhHHHHHHHHHHHHHHH
Q 015064 229 LGAIIPAHTWFGVLISALGVGMLECSGSPPSVGDFLNFLSAIFFGIHMLRTERISRSTKKENFLPLLGYEICVVALLSTI 308 (414)
Q Consensus 229 l~er~~~~~~~gi~l~~~Gv~li~~~~~~~~~G~llal~aa~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 308 (414)
.+.+.++.+.+|.+.+++-++.... ......+++++.+..|+.-..-.+.+.+- +...+.... ..+. ..
T Consensus 22 ~~~~~swi~lIa~l~G~lcv~f~s~---~k~~n~~fGLI~~~lY~yi~~q~~~ya~~------ll~L~~~~p-~~iy-G~ 90 (222)
T COG3201 22 GGVKLSWIELIATLSGLLCVVFASK---GKPINYFFGLINVALYAYIFFQIKLYAEV------LLQLFFYAP-AQIY-GW 90 (222)
T ss_pred cCCCccHHHHHHHHHHHHHHHHHHh---cCchhhhHHHHHHHHHHHHHHHHHHhHHH------HHHHHheec-hhHH-HH
Confidence 4677777777777666666665553 33456778888888888665555554432 111111111 1111 11
Q ss_pred HHHHhccCCCCCCCCCCcchhhhhccccchhhHHHHHHHHHHHHHHHHHHHHHHhccCChhHHHHHhhhHHHHHHH
Q 015064 309 WVLVGGWFDSSQDFDQSPWTWTMLWDWMVTFPWVPALYTGIFSTGICLWIEIAAMRDVSATETAIIYGLEPLWGAG 384 (414)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ll~lgv~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l 384 (414)
+.......+...+ +. ...++++++.|...+..+++.+..-...++..-.+..|-.-+....+..+-.++
T Consensus 91 f~W~~~~q~~~~~-~~------v~~~~l~~k~w~~~lv~~ivg~l~f~~i~~a~g~~~~p~~Ds~~~visivAqil 159 (222)
T COG3201 91 FAWSRQGQRNKAE-EG------VIASRLKAKGWLAVLVAGIVGTLAFVSILFALGDSVAPWWDSCTFVISIVAQIL 159 (222)
T ss_pred HHHHhccccccCc-cc------hhhcccCccchhhhhhHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHH
Confidence 1111121111111 10 112466788899999988877654333333333333244444444444443333
No 153
>PF09295 ChAPs: ChAPs (Chs5p-Arf1p-binding proteins); InterPro: IPR015374 ChAPs (Chs5p-Arf1p-binding proteins) are required for the export of specialised cargo from the Golgi. They physically interact with Chs3, Chs5 and the small GTPase Arf1, and they also form interactions with each other [].
Probab=20.77 E-value=45 Score=33.80 Aligned_cols=27 Identities=37% Similarity=0.930 Sum_probs=19.7
Q ss_pred eeeccCcceeEEecccccccccccccccccccc
Q 015064 23 YYYATKPTWKIVTTDCTCSISSCCFNFFSNVTN 55 (414)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 55 (414)
|++..+.+||+.. +.-||+|.||+..=
T Consensus 38 ~wfgk~~~~kv~~------~tyC~yN~Fsk~Di 64 (395)
T PF09295_consen 38 YWFGKKKSWKVER------GTYCCYNAFSKVDI 64 (395)
T ss_pred cccCCCCcceeee------EEEEEEeccccceE
Confidence 4555566899873 55799999998643
No 154
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=20.42 E-value=34 Score=32.75 Aligned_cols=15 Identities=27% Similarity=0.441 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHHHHh
Q 015064 124 IRSIFLLNVITIVYA 138 (414)
Q Consensus 124 ~~g~l~~lla~~~wg 138 (414)
..+.++++++.++|-
T Consensus 26 ~~~~llll~ail~w~ 40 (381)
T PF05297_consen 26 LFGLLLLLVAILVWF 40 (381)
T ss_dssp ---------------
T ss_pred HHHHHHHHHHHHHHH
Confidence 456778888888885
No 155
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=20.28 E-value=9.1e+02 Score=24.45 Aligned_cols=48 Identities=23% Similarity=0.333 Sum_probs=28.5
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHH-----HHhccCChhHHHHHhhhHHHHHH
Q 015064 335 WMVTFPWVPALYTGIFSTGICLWIEI-----AAMRDVSATETAIIYGLEPLWGA 383 (414)
Q Consensus 335 w~~~~~~~~ll~lgv~~~~~~~~l~~-----~al~~~~a~~~s~~~~l~pv~a~ 383 (414)
|-+|..|...+++|+-+ .+.|.... +.-+-.++..++.+..+.-+..+
T Consensus 205 w~~~~aW~vtLfmGlqS-~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~ 257 (395)
T COG2807 205 WRSPLAWQVTLFMGLQS-LLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQL 257 (395)
T ss_pred ccCchhHHHHHHHHhhH-HHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHH
Confidence 55677899999999854 33443333 33455577777744444443333
No 156
>PF11139 DUF2910: Protein of unknown function (DUF2910); InterPro: IPR021315 Some members in this bacterial family annotate the proteins as cytochrome C biogenesis proteins however this cannot be confirmed. Currently no function for this family is known.
Probab=20.23 E-value=6.5e+02 Score=22.72 Aligned_cols=37 Identities=14% Similarity=0.126 Sum_probs=22.9
Q ss_pred hhhHHHHHHHHHHHHhcCCC-------------chhhHHHHHHHHHhhhc
Q 015064 375 YGLEPLWGAGFAWFLLGERW-------------STAGWIGAALVLDVQIF 411 (414)
Q Consensus 375 ~~l~pv~a~l~~~~~lge~~-------------s~~~~iG~~LIi~g~~l 411 (414)
....|+...++.+.+.+|+. ...+..+..+.++|+++
T Consensus 159 i~~~~~~~pll~~~~~~~r~~~~l~r~~~wl~~~~~~i~~~i~~i~G~~l 208 (214)
T PF11139_consen 159 IASLPALLPLLAYLVAPERAEPWLERLRSWLRRHSRQILAVILLIVGALL 208 (214)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHH
Confidence 34566666777787777664 22345566666666654
Done!