Query 015070
Match_columns 413
No_of_seqs 231 out of 877
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 06:08:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015070.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015070hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2gak_A Beta-1,6-N-acetylglucos 100.0 1.4E-63 4.6E-68 508.3 23.2 278 66-361 80-386 (391)
2 3bcv_A Putative glycosyltransf 80.1 16 0.00053 32.2 11.1 93 69-179 4-98 (240)
3 1qg8_A Protein (spore coat pol 78.1 16 0.00055 32.6 10.7 116 70-199 1-122 (255)
4 4fix_A UDP-galactofuranosyl tr 75.0 6.6 0.00023 41.9 8.2 112 66-190 176-294 (657)
5 4hg6_A Cellulose synthase subu 72.2 83 0.0028 34.1 16.2 116 67-200 137-273 (802)
6 2d7i_A Polypeptide N-acetylgal 71.1 16 0.00055 37.9 9.8 108 68-191 110-223 (570)
7 2z86_A Chondroitin synthase; G 70.0 47 0.0016 34.3 13.2 105 69-190 92-200 (625)
8 2z86_A Chondroitin synthase; G 58.5 58 0.002 33.6 11.2 99 68-187 373-474 (625)
9 1xhb_A Polypeptide N-acetylgal 57.7 41 0.0014 33.4 9.5 109 67-191 26-141 (472)
10 2ffu_A Ppgalnact-2, polypeptid 56.0 54 0.0019 32.9 10.2 92 68-179 64-160 (501)
11 1ezi_A CMP-N-acetylneuraminic 46.8 96 0.0033 27.2 9.3 90 84-191 30-121 (228)
12 3ckj_A Putative uncharacterize 35.3 2.1E+02 0.0071 26.8 10.2 116 68-199 46-166 (329)
13 1qwj_A Cytidine monophospho-N- 29.7 2.1E+02 0.0071 25.1 8.7 89 84-191 29-119 (229)
14 3f1y_A Mannosyl-3-phosphoglyce 27.3 1.5E+02 0.0052 29.0 7.8 116 69-200 93-215 (387)
15 2fy7_A Beta-1,4-galactosyltran 27.1 2.4E+02 0.0084 26.2 9.0 26 68-94 63-88 (287)
16 1jsd_A Haemagglutinin (HA1 cha 22.4 40 0.0014 32.7 2.3 44 163-207 73-122 (319)
17 1iio_A Conserved hypothetical 22.2 27 0.00092 27.3 0.9 16 174-189 22-37 (84)
18 3bed_A PTS system, IIA compone 21.8 3.4E+02 0.012 22.3 8.2 94 70-180 4-100 (142)
19 3ku3_A Hemagglutinin HA1 chain 20.4 47 0.0016 32.3 2.4 44 163-207 75-124 (327)
20 2vsh_A TARI, 2-C-methyl-D-eryt 20.2 1.3E+02 0.0045 26.1 5.3 95 84-191 32-130 (236)
No 1
>2gak_A Beta-1,6-N-acetylglucosaminyltransferase; glycoprotein, CIS-peptide, dimer; HET: NAG; 2.00A {Mus musculus} PDB: 2gam_A* 3otk_A*
Probab=100.00 E-value=1.4e-63 Score=508.33 Aligned_cols=278 Identities=24% Similarity=0.325 Sum_probs=238.0
Q ss_pred CCCCCcEEEEEEeeCCCHHHHHHHHHHHcCCCCeEEEEEcCCCChHHHHHHHhhhccCCCcccccceEeeCccceeeecC
Q 015070 66 GPKIPRFAYLVSGSKGDLEKLWRTLQALYHPRNRYVLHLDLEAPTEERLELASRVEKDPMFSKVGNVYMSTKANMVTYRG 145 (413)
Q Consensus 66 ~~~~~kiAYLI~~hk~d~~~l~RLL~aLy~p~n~y~IHlD~ks~~~~~~~L~~~v~~~~~~~~~~NV~vv~~~~~V~wgg 145 (413)
++.+|||||+|++|+ |+++++||++++|||+|.||||+|+|++..++..++.. .++++||+|++++..|.|||
T Consensus 80 ~e~~~kiAflil~h~-d~~~l~rll~~ly~p~n~y~IHvD~ks~~~~~~~~~~~------~~~f~NV~v~~~~~~v~WGg 152 (391)
T 2gak_A 80 EEVGFPIAYSIVVHH-KIEMLDRLLRAIYMPQNFYCIHVDRKAEESFLAAVQGI------ASCFDNVFVASQLESVVYAS 152 (391)
T ss_dssp HHHTSCEEEEEEECS-CHHHHHHHHHHHCCTTSEEEEEECTTSCHHHHHHHHHH------HHTCTTEEECSSCCCCCTTS
T ss_pred cccCCCEEEEEEecC-CHHHHHHHHHHHhCCCCeEEEEEeCCCCHHHHHHHHHH------HhcCCCEEEeccCcccccCC
Confidence 456799999999998 99999999999999999999999999998877776532 34789999999999999999
Q ss_pred ccHHHHHHHHHHHHHhCCCCCceEEeccCCcccccchhHHHHHHhccCCCcceEEeecCCCCcceeccc--ccccCCCcc
Q 015070 146 PTMVANTLHACAILLKNSKDWDWFINLSASDYPLVTQDDLLYTFSGLSRKLNFIEHTSHLGWKEEKRAM--PLMVDPGLY 223 (413)
Q Consensus 146 ~S~V~AtL~~~~~lL~~~~~wdyfi~LSgsDyPLkt~~~i~~~f~~~~~~~nFIe~~~~~~wk~~~R~~--~~i~dpgl~ 223 (413)
+|||+|+++||+.||+.+.+|||||||||+||||+|+++|.++|+. ++|+|||++.++.+|++. |.+ +.+.+++++
T Consensus 153 ~S~v~A~l~ll~~aL~~~~~w~yfilLSgsD~PLkt~~~i~~~l~~-~~~~nFIe~~~~~~~~~~-R~~~~~~~~~~~l~ 230 (391)
T 2gak_A 153 WTRVKADLNCMKDLYRMNANWKYLINLCGMDFPIKTNLEIVRKLKC-STGENNLETEKMPPNKEE-RWKKRYAVVDGKLT 230 (391)
T ss_dssp HHHHHHHHHHHHHHHHHCSCCCEEEEEETTCEESSCHHHHHHHHHH-TTTCCBCCBEECCGGGSH-HHHEEEEEETTEEE
T ss_pred chHHHHHHHHHHHHHhcCCCCCEEEEecCCCccccCHHHHHHHHHh-cCCCceeeccCCCccccc-ceEeeeecccccee
Confidence 9999999999999998878999999999999999999999999986 479999999988788653 332 223333322
Q ss_pred ccccccceeeccCCCCCCCeeeeccceeeeecHHHHHHhhhccCCchHHHHHhhcCCCCCCchhHHHHHhcCC-------
Q 015070 224 MLTKSDIFWVTPRRTLPTAFKLFTGSAWMVLSRSFVEYCIWGWDNLPRTLLMYYTNFVSSPESYFQTVICNVP------- 296 (413)
Q Consensus 224 ~~~k~~~~~~~~kR~~p~~~~l~~GS~W~~LsR~fvey~l~~~d~lpr~ll~yf~~~~~pDE~yFqTvl~Ns~------- 296 (413)
.+..++|.+|.++++++|||||+|||+||+||++ |+.++.+++||+++++|||+||||++.|..
T Consensus 231 -------~~~~~k~~~P~~~~~~~GSqW~~LtR~~v~~vl~--d~~~~~~~~~~k~t~~pDE~ffqTll~~~~~pg~~~~ 301 (391)
T 2gak_A 231 -------NTGIVKAPPPLKTPLFSGSAYFVVTREYVGYVLE--NENIQKLMEWAQDTYSPDEFLWATIQRIPEVPGSFPS 301 (391)
T ss_dssp -------EEEEECCCCSCSSCCEECCSCCEEEHHHHHHHHH--CHHHHHHHHHHTTSSSGGGTHHHHHTTSTTSTTCCCS
T ss_pred -------eecccccCCccccceecccceeEecHHHHHHHHh--CCcHHHHHHHHcCCcCCchhHHHHHhhccCCCCcccc
Confidence 2345678889899999999999999999999998 566888999999999999999999987642
Q ss_pred --CCCCccccCceeEEecCCCCC------CCCC----------ccChhhHHHHhcCCceEEeccCC--CHHHHHHHHHHH
Q 015070 297 --EFVPTVVNHDLHYISWDNPPG------QHPH----------ILSLNDTSEMISSSAAFARKFRQ--NALVLDKIDKEL 356 (413)
Q Consensus 297 --~f~~t~vn~~LRyi~W~~~~~------~~P~----------~l~~~D~~~l~~S~alFARKF~~--d~~vLd~Id~~l 356 (413)
+|+++++|+++|||+|+++.+ .||. +|+.+|++.|.+|+++|||||++ |++|++|||+.|
T Consensus 302 ~~~~~~~~~~~~lr~i~W~~~~g~~~~G~p~p~c~~~~~~~~C~~~~~Dl~~l~~s~~lFARKF~~~~d~~~l~~l~~~l 381 (391)
T 2gak_A 302 SNKYDLSDMNAIARFVKWQYFEGDVSNGAPYPPCSGVHVRSVCVFGAGDLSWMLRQHHLFANKFDMDVDPFAIQCLDEHL 381 (391)
T ss_dssp SGGGCBCTTTSSSEEECBTTTCSCGGGTCSSCCCSSEEETTEEECCGGGHHHHTTSCCSEEECCCTTTCHHHHHHHHHHH
T ss_pred ccccccccccCceEEEEecccCCccccCCCCCCCccceecceeeecHHHHHHHHhCCCceEEccCCccCHHHHHHHHHHH
Confidence 344566799999999985322 2443 89999999999999999999997 789999999999
Q ss_pred hCCCC
Q 015070 357 LGRKN 361 (413)
Q Consensus 357 l~r~~ 361 (413)
.+|+-
T Consensus 382 ~~r~~ 386 (391)
T 2gak_A 382 RRKAL 386 (391)
T ss_dssp HHHHH
T ss_pred hhhhh
Confidence 88754
No 2
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=80.05 E-value=16 Score=32.23 Aligned_cols=93 Identities=16% Similarity=0.133 Sum_probs=59.5
Q ss_pred CCcEEEEEEeeCCCHHHHHHHHHHHcCC--CCeEEEEEcCCCChHHHHHHHhhhccCCCcccccceEeeCccceeeecCc
Q 015070 69 IPRFAYLVSGSKGDLEKLWRTLQALYHP--RNRYVLHLDLEAPTEERLELASRVEKDPMFSKVGNVYMSTKANMVTYRGP 146 (413)
Q Consensus 69 ~~kiAYLI~~hk~d~~~l~RLL~aLy~p--~n~y~IHlD~ks~~~~~~~L~~~v~~~~~~~~~~NV~vv~~~~~V~wgg~ 146 (413)
.|++..+|.+|+ ..+.|.++|+.|... .+.=+|=+|..+++...+.++.+.+ ..++|.++.+. -.|
T Consensus 4 ~p~vsViIp~yn-~~~~l~~~l~Sl~~q~~~~~eiIvvDd~S~d~t~~~~~~~~~------~~~~i~~i~~~----n~G- 71 (240)
T 3bcv_A 4 IPKVSVIVPIYN-VEKYLDQCVQALLAQTLSDIEIILIDDESPDNCPKICDDYAA------QYPNIKVIHKK----NAG- 71 (240)
T ss_dssp CCSEEEEEEESS-CTTTHHHHHHHHHTCSSSSEEEEEEECCCSSSHHHHHHHHHH------HCSSEEEEECC----CCC-
T ss_pred CCcEEEEEecCC-CHHHHHHHHHHHHhCcCCCeEEEEEECCCCcCHHHHHHHHHh------hCCCEEEEECC----CCC-
Confidence 468999999998 468999999998531 1333555777666655555554432 35688888532 233
Q ss_pred cHHHHHHHHHHHHHhCCCCCceEEeccCCcccc
Q 015070 147 TMVANTLHACAILLKNSKDWDWFINLSASDYPL 179 (413)
Q Consensus 147 S~V~AtL~~~~~lL~~~~~wdyfi~LSgsDyPL 179 (413)
...|--.+++.+ .=||++.|.+.|++-
T Consensus 72 -~~~a~N~g~~~a-----~g~~i~~lD~Dd~~~ 98 (240)
T 3bcv_A 72 -LGMACNSGLDVA-----TGEYVAFCDSDDYVD 98 (240)
T ss_dssp -HHHHHHHHHHHC-----CSSEEEECCTTCCCC
T ss_pred -hHHHHHHHHHHc-----CCCEEEEECCCCcCC
Confidence 333333444432 238999999999863
No 3
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=78.12 E-value=16 Score=32.55 Aligned_cols=116 Identities=6% Similarity=0.056 Sum_probs=68.0
Q ss_pred CcEEEEEEeeCCCHHHHHHHHHHHcCC--CCeEEEEEcCCCChHHHHHHHhhhccCCCcccccceEeeCccce---eeec
Q 015070 70 PRFAYLVSGSKGDLEKLWRTLQALYHP--RNRYVLHLDLEAPTEERLELASRVEKDPMFSKVGNVYMSTKANM---VTYR 144 (413)
Q Consensus 70 ~kiAYLI~~hk~d~~~l~RLL~aLy~p--~n~y~IHlD~ks~~~~~~~L~~~v~~~~~~~~~~NV~vv~~~~~---V~wg 144 (413)
|++..+|.+++ ..+.|.++|+.|... .+.=+|-+|..+++...+.++.+. ..++|.++..... ..+.
T Consensus 1 p~vSViIp~yn-~~~~l~~~l~Sl~~q~~~~~eiivvDd~S~d~t~~~~~~~~-------~~~~i~~i~~~~~~~~~~~~ 72 (255)
T 1qg8_A 1 PKVSVIMTSYN-KSDYVAKSISSILSQTFSDFELFIMDDNSNEETLNVIRPFL-------NDNRVRFYQSDISGVKERTE 72 (255)
T ss_dssp CCEEEEEEESS-CTTTHHHHHHHHHTCSCCCEEEEEEECSCCHHHHHHHGGGG-------GSTTEEEEECCCCSHHHHHS
T ss_pred CeEEEEEEcCC-CHHHHHHHHHHHHhccCCceEEEEEECCCCchHHHHHHHHh-------hcCCEEEEeccccccccccc
Confidence 67889999998 468999999998431 133466677777766555554432 2468887754310 0002
Q ss_pred CccHHHHHHHHHHHHHhCCCCCceEEeccCCcccccc-hhHHHHHHhccCCCcceE
Q 015070 145 GPTMVANTLHACAILLKNSKDWDWFINLSASDYPLVT-QDDLLYTFSGLSRKLNFI 199 (413)
Q Consensus 145 g~S~V~AtL~~~~~lL~~~~~wdyfi~LSgsDyPLkt-~~~i~~~f~~~~~~~nFI 199 (413)
..+...|--.+++.+ .-+|++.|.+.|++-.. .+.+...+.+ +.+...+
T Consensus 73 n~G~~~a~N~gi~~a-----~g~~i~~lD~Dd~~~~~~l~~~~~~~~~-~~~~~~v 122 (255)
T 1qg8_A 73 KTRYAALINQAIEMA-----EGEYITYATDDNIYMPDRLLKMVRELDT-HPEKAVI 122 (255)
T ss_dssp SCHHHHHHHHHHHHC-----CCSEEEEEETTEEECTTHHHHHHHHHHH-CTTCCEE
T ss_pred ccCHHHHHHHHHHHc-----CCCEEEEeCCCCccChHHHHHHHHHHHh-CCCceEE
Confidence 334444444444443 34899999999997432 3344455543 2244444
No 4
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=75.05 E-value=6.6 Score=41.87 Aligned_cols=112 Identities=11% Similarity=-0.011 Sum_probs=70.1
Q ss_pred CCCCCcEEEEEEeeCCCHHHHHHHHHHHcCC-----CCeEEEEEcCCCChH-HHHHHHhhhccCCCcccccceEeeCccc
Q 015070 66 GPKIPRFAYLVSGSKGDLEKLWRTLQALYHP-----RNRYVLHLDLEAPTE-ERLELASRVEKDPMFSKVGNVYMSTKAN 139 (413)
Q Consensus 66 ~~~~~kiAYLI~~hk~d~~~l~RLL~aLy~p-----~n~y~IHlD~ks~~~-~~~~L~~~v~~~~~~~~~~NV~vv~~~~ 139 (413)
.+.+|+++.+|.+++ ..+.+.++|++|... .+.=+|-||..|++. ....+.+.++ ...++|.++...+
T Consensus 176 ~~~~pkVSVVIptYN-~~~~L~~~L~SL~~qt~~~~~~~EIIVVDNgStD~s~~~~~~e~~~-----~~~~~I~vI~~~N 249 (657)
T 4fix_A 176 APGTANIAVGIPTFN-RPADCVNALRELTADPLVDQVIGAVIVPDQGERKVRDHPDFPAAAA-----RLGSRLSIHDQPN 249 (657)
T ss_dssp CCSCCCEEEECCBSS-CHHHHHHHHHHHTTSHHHHTTEEEEEEEECSSSCGGGSTTHHHHHH-----HHGGGEEEEECCC
T ss_pred CCCCCeEEEEEEecC-CHHHHHHHHHHHHcCccccCCCCEEEEEECcCCCccchHHHHHHHH-----hcCCCEEEEECCC
Confidence 355789999999999 589999999999642 233478888877542 1111111111 1346899886542
Q ss_pred eeeecCccHHHHHHHHHHHHHhCCCCCceEEeccCCcccccc-hhHHHHHHh
Q 015070 140 MVTYRGPTMVANTLHACAILLKNSKDWDWFINLSASDYPLVT-QDDLLYTFS 190 (413)
Q Consensus 140 ~V~wgg~S~V~AtL~~~~~lL~~~~~wdyfi~LSgsDyPLkt-~~~i~~~f~ 190 (413)
- +.-.|--.+++.+... .+.||+++|.+.+.+-.. .+.+.+++.
T Consensus 250 ---~---G~a~a~N~Gl~~A~g~-~~~dyIlfLD~D~~~~pd~L~~ll~~l~ 294 (657)
T 4fix_A 250 ---L---GGSGGYSRVMYEALKN-TDCQQILFMDDDIRLEPDSILRVLAMHR 294 (657)
T ss_dssp ---C---HHHHHHHHHHHHHHHH-CCCSEEEEECSSEEECTHHHHHHHHHHH
T ss_pred ---C---CHHHHHHHHHHHHHhc-CCCCEEEEECCCCccChhHHHHHHHHHH
Confidence 2 2233555667777654 268999999988876522 334455554
No 5
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=72.21 E-value=83 Score=34.05 Aligned_cols=116 Identities=22% Similarity=0.217 Sum_probs=61.9
Q ss_pred CCCCcEEEEEEeeCCCHHHHHHHHHHHc---CCCC-eEEEEEcCCCChHH---------------HHHHHhhhccCCCcc
Q 015070 67 PKIPRFAYLVSGSKGDLEKLWRTLQALY---HPRN-RYVLHLDLEAPTEE---------------RLELASRVEKDPMFS 127 (413)
Q Consensus 67 ~~~~kiAYLI~~hk~d~~~l~RLL~aLy---~p~n-~y~IHlD~ks~~~~---------------~~~L~~~v~~~~~~~ 127 (413)
+..|++..+|-+++.+.+.+.++|+++. .|+. .-+|=+|..+++.. +..++.+.
T Consensus 137 ~~~P~VSViIPtyNe~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~~d~~i~~~~~~~~~~l~~~~------- 209 (802)
T 4hg6_A 137 EELPTVDILVPSYNEPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMSPDPELAQKAQERRRELQQLC------- 209 (802)
T ss_dssp TTCCCEEEEEECTTCCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTCSSHHHHHHHHHHHHHHHHHH-------
T ss_pred cCCCcEEEEEEECCCCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCccccccCCHHHHHHHHhhhHHHHHHH-------
Confidence 3457999999999965555688888882 3443 33555666554432 22333222
Q ss_pred cccceEeeCccceeeecCccHHHHHHHHHHHHHhCCCCCceEEeccCCcccccchhHHHHHHhcc--CCCcceEE
Q 015070 128 KVGNVYMSTKANMVTYRGPTMVANTLHACAILLKNSKDWDWFINLSASDYPLVTQDDLLYTFSGL--SRKLNFIE 200 (413)
Q Consensus 128 ~~~NV~vv~~~~~V~wgg~S~V~AtL~~~~~lL~~~~~wdyfi~LSgsDyPLkt~~~i~~~f~~~--~~~~nFIe 200 (413)
...++.++.... .++| ...| +...++. .+-||++.+.+.|.+ +.+.+.+....+ +.+...+.
T Consensus 210 ~~~~v~~i~~~~--~~~G--Ka~a----lN~gl~~-a~gd~Il~lDaD~~~--~pd~L~~lv~~~~~dp~v~~V~ 273 (802)
T 4hg6_A 210 RELGVVYSTRER--NEHA--KAGN----MSAALER-LKGELVVVFDADHVP--SRDFLARTVGYFVEDPDLFLVQ 273 (802)
T ss_dssp HHHTCEEEECSS--CCSH--HHHH----HHHHHHH-CCCSEEEECCTTEEE--CTTHHHHHHHHHHHSSSCCEEE
T ss_pred HhcCcEEEEecC--CCCc--chHH----HHHHHHh-cCCCEEEEECCCCCc--ChHHHHHHHHHHhcCCCeEEEe
Confidence 123555553221 1222 2222 2233332 246999999999988 444444433222 33444543
No 6
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=71.11 E-value=16 Score=37.89 Aligned_cols=108 Identities=13% Similarity=0.135 Sum_probs=69.0
Q ss_pred CCCcEEEEEEeeCCCHHHHHHHHHHHc--CCCC--eEEEEEcCCCChHH-HHHHHhhhccCCCcccccceEeeCccceee
Q 015070 68 KIPRFAYLVSGSKGDLEKLWRTLQALY--HPRN--RYVLHLDLEAPTEE-RLELASRVEKDPMFSKVGNVYMSTKANMVT 142 (413)
Q Consensus 68 ~~~kiAYLI~~hk~d~~~l~RLL~aLy--~p~n--~y~IHlD~ks~~~~-~~~L~~~v~~~~~~~~~~NV~vv~~~~~V~ 142 (413)
..|++..+|.+|+...+.|.+.|+.+. .+.+ .=+|-||-.|++.. .+.++.+++ .+++|+++....
T Consensus 110 ~~P~vSVIIp~yNe~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l~~~~~------~~~~v~vi~~~~--- 180 (570)
T 2d7i_A 110 TLPNTSIIIPFHNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYMA------LFPSVRILRTKK--- 180 (570)
T ss_dssp SCCCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHHHHHHT------TSTTEEEEECSS---
T ss_pred CCCCeEEEEEECCCCHHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHHHHHHHHHH------hCCeEEEEECCC---
Confidence 457899999999943488999888883 2223 13566777666555 555665543 357888875322
Q ss_pred ecCccHHHHHHHHHHHHHhCCCCCceEEeccCCccccc-chhHHHHHHhc
Q 015070 143 YRGPTMVANTLHACAILLKNSKDWDWFINLSASDYPLV-TQDDLLYTFSG 191 (413)
Q Consensus 143 wgg~S~V~AtL~~~~~lL~~~~~wdyfi~LSgsDyPLk-t~~~i~~~f~~ 191 (413)
..+...|-..+++.+ .-||++.|.+.+.+-. -.+.+++.+.+
T Consensus 181 --n~G~~~A~N~G~~~A-----~gd~i~fLD~D~~~~p~~L~~ll~~l~~ 223 (570)
T 2d7i_A 181 --REGLIRTRMLGASVA-----TGDVITFLDSHCEANVNWLPPLLDRIAR 223 (570)
T ss_dssp --CCCHHHHHHHHHHHC-----CSSEEEECCSSEEECTTCSHHHHHHHHH
T ss_pred --CCCHHHHHHHHHHhc-----CCCEEEEEcCCccccccHHHHHHHHHHh
Confidence 234666666666654 2489999999998832 23445555543
No 7
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=69.97 E-value=47 Score=34.26 Aligned_cols=105 Identities=11% Similarity=0.039 Sum_probs=63.6
Q ss_pred CCcEEEEEEeeCCCHHHHHHHHHHHcCC---CCeEEEEEcCCCChHHHHHHHhhhccCCCcccccceEeeCccceeeecC
Q 015070 69 IPRFAYLVSGSKGDLEKLWRTLQALYHP---RNRYVLHLDLEAPTEERLELASRVEKDPMFSKVGNVYMSTKANMVTYRG 145 (413)
Q Consensus 69 ~~kiAYLI~~hk~d~~~l~RLL~aLy~p---~n~y~IHlD~ks~~~~~~~L~~~v~~~~~~~~~~NV~vv~~~~~V~wgg 145 (413)
.|++..+|.+++ ..+.+.++|++|... .+.=+|-+|..+++...+.++.+ ....+|.++... -.|
T Consensus 92 ~p~vsviIp~~n-~~~~l~~~l~sl~~q~~~~~~eiivvDd~s~d~t~~~~~~~-------~~~~~i~~i~~~----~~~ 159 (625)
T 2z86_A 92 IDGLSIVIPTYN-RAKILAITLACLCNQKTIYDYEVIVADDGSKENIEEIVREF-------ESLLNIKYVRQK----DYG 159 (625)
T ss_dssp CCCEEEEEEESS-CHHHHHHHHHHHHTCCCSSCEEEEEEEESCSSCHHHHHHTT-------TTTSCEEEEEEC----CCS
T ss_pred CCcEEEEEecCC-cHHHHHHHHHHHHhhccCCCeEEEEEeCCCchhHHHHHHHh-------hhcCCeEEEEeC----CCC
Confidence 478999999998 689999999999532 23335555655555544444432 123567776532 223
Q ss_pred ccHHHHHHHHHHHHHhCCCCCceEEeccCCcccccc-hhHHHHHHh
Q 015070 146 PTMVANTLHACAILLKNSKDWDWFINLSASDYPLVT-QDDLLYTFS 190 (413)
Q Consensus 146 ~S~V~AtL~~~~~lL~~~~~wdyfi~LSgsDyPLkt-~~~i~~~f~ 190 (413)
.+...|--.+++.+ .-||++.|.+.+.+-.. .+.+...|.
T Consensus 160 ~g~~~a~N~g~~~a-----~g~~v~~lD~D~~~~~~~l~~~~~~~~ 200 (625)
T 2z86_A 160 YQLCAVRNLGLRAA-----KYNYVAILDCDMAPNPLWVQSYMELLA 200 (625)
T ss_dssp CCHHHHHHHHHHHC-----CSSEEEEECTTEEECTTHHHHHHHHHH
T ss_pred cchhHHHHHHHHhC-----CcCEEEEECCCCCCCHHHHHHHHHHHh
Confidence 44555555455443 35899999999998322 233444443
No 8
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=58.54 E-value=58 Score=33.57 Aligned_cols=99 Identities=11% Similarity=0.113 Sum_probs=60.6
Q ss_pred CCCcEEEEEEeeCCCHHHHHHHHHHHcC---CCCeEEEEEcCCCChHHHHHHHhhhccCCCcccccceEeeCccceeeec
Q 015070 68 KIPRFAYLVSGSKGDLEKLWRTLQALYH---PRNRYVLHLDLEAPTEERLELASRVEKDPMFSKVGNVYMSTKANMVTYR 144 (413)
Q Consensus 68 ~~~kiAYLI~~hk~d~~~l~RLL~aLy~---p~n~y~IHlD~ks~~~~~~~L~~~v~~~~~~~~~~NV~vv~~~~~V~wg 144 (413)
..|+++.+|.+++ ..+.+.+.|+.+.. ++.. +|-+|..|++...+.++.+.+ ..++|.++... -+
T Consensus 373 ~~~~vsiii~~yn-~~~~l~~~l~s~~~q~~~~~e-iivvdd~S~d~t~~~~~~~~~------~~~~i~~~~~~----n~ 440 (625)
T 2z86_A 373 RVPLVSIYIPAYN-CSKYIVRCVESALNQTITDLE-VCICDDGSTDDTLRILQEHYA------NHPRVRFISQK----NK 440 (625)
T ss_dssp SSCSEEEEEEESS-CTTTHHHHHHHHHSSSCCSEE-EEEEEESCSSSHHHHHHHHHT------TCTTEEEEEEC----CC
T ss_pred cCCeEEEEEeCCC-CHHHHHHHHHHHHhCcCCCeE-EEEEECcCChhHHHHHHHHHh------hCCcEEEEeCC----CC
Confidence 3578999999998 57899999998842 3334 444555555544444544332 35688887422 23
Q ss_pred CccHHHHHHHHHHHHHhCCCCCceEEeccCCcccccchhHHHH
Q 015070 145 GPTMVANTLHACAILLKNSKDWDWFINLSASDYPLVTQDDLLY 187 (413)
Q Consensus 145 g~S~V~AtL~~~~~lL~~~~~wdyfi~LSgsDyPLkt~~~i~~ 187 (413)
| ...|.-.+++.+ .-||+..|.+.|++ ..+.|..
T Consensus 441 G--~~~a~n~g~~~a-----~g~~i~~ld~D~~~--~~~~l~~ 474 (625)
T 2z86_A 441 G--IGSASNTAVRLC-----RGFYIGQLDSDDFL--EPDAVEL 474 (625)
T ss_dssp C--HHHHHHHHHHHC-----CSSEEEECCTTCEE--CTTHHHH
T ss_pred C--HHHHHHHHHHhc-----CCCEEEEECCCccc--ChhHHHH
Confidence 3 334444444432 34899999999986 4444433
No 9
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=57.66 E-value=41 Score=33.42 Aligned_cols=109 Identities=17% Similarity=0.152 Sum_probs=67.1
Q ss_pred CCCCcEEEEEEeeCCCHHHHHHHHHHHcC--CCC--eEEEEEcCCCCh-HHHHHHHhhhccCCCccccc-ceEeeCccce
Q 015070 67 PKIPRFAYLVSGSKGDLEKLWRTLQALYH--PRN--RYVLHLDLEAPT-EERLELASRVEKDPMFSKVG-NVYMSTKANM 140 (413)
Q Consensus 67 ~~~~kiAYLI~~hk~d~~~l~RLL~aLy~--p~n--~y~IHlD~ks~~-~~~~~L~~~v~~~~~~~~~~-NV~vv~~~~~ 140 (413)
+..|++..+|.+|+...+.|.++|+.|.. +.+ .=+|-||-.+++ ...+.++.+++ .++ +|.++.....
T Consensus 26 ~~~p~vSVIIp~yN~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l~~~~~------~~~~~v~vi~~~~n 99 (472)
T 1xhb_A 26 DNLPTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVK------KLKVPVHVIRMEQR 99 (472)
T ss_dssp SCCCCEEEEEEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHHHHH------SSSSCEEEEECSSC
T ss_pred cCCCCeEEEEEeCCCCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHHHHHHHHH------HCCCcEEEEECCCC
Confidence 34688999999998433899999998842 223 236667776665 34445555443 345 7888754321
Q ss_pred eeecCccHHHHHHHHHHHHHhCCCCCceEEeccCCcccccc-hhHHHHHHhc
Q 015070 141 VTYRGPTMVANTLHACAILLKNSKDWDWFINLSASDYPLVT-QDDLLYTFSG 191 (413)
Q Consensus 141 V~wgg~S~V~AtL~~~~~lL~~~~~wdyfi~LSgsDyPLkt-~~~i~~~f~~ 191 (413)
.+...|-..+++.+ .-||++.|.+.|.+-.. .+.+++.+.+
T Consensus 100 -----~G~~~a~N~g~~~A-----~gd~i~flD~D~~~~p~~L~~ll~~~~~ 141 (472)
T 1xhb_A 100 -----SGLIRARLKGAAVS-----RGQVITFLDAHCECTAGWLEPLLARIKH 141 (472)
T ss_dssp -----CCHHHHHHHHHHHC-----CSSEEEEEESSEEECTTCHHHHHHHHHH
T ss_pred -----CChHHHHHHHHHhc-----cCCeEEEECCCeEeCccHHHHHHHHHHh
Confidence 23555555555553 25899999998885432 3445555543
No 10
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=55.98 E-value=54 Score=32.89 Aligned_cols=92 Identities=12% Similarity=0.132 Sum_probs=58.2
Q ss_pred CCCcEEEEEEeeCCCHH-HHHHHHHHHc--CCCC--eEEEEEcCCCChHHHHHHHhhhccCCCcccccceEeeCccceee
Q 015070 68 KIPRFAYLVSGSKGDLE-KLWRTLQALY--HPRN--RYVLHLDLEAPTEERLELASRVEKDPMFSKVGNVYMSTKANMVT 142 (413)
Q Consensus 68 ~~~kiAYLI~~hk~d~~-~l~RLL~aLy--~p~n--~y~IHlD~ks~~~~~~~L~~~v~~~~~~~~~~NV~vv~~~~~V~ 142 (413)
..|++..+|.+|+. .+ .|.++|+.+. .+.+ .=+|-||-.|++....++ + ...++|+++....
T Consensus 64 ~~p~vSVIIp~yN~-~~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~~~~---~------~~~~~v~vi~~~~--- 130 (501)
T 2ffu_A 64 DLPATSVVITFHNE-ARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDGAL---L------GKIEKVRVLRNDR--- 130 (501)
T ss_dssp SCCCEEEEEEESSC-CHHHHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHHHHG---G------GGBTTEEEEECSS---
T ss_pred CCCCEEEEEEeCcC-cHHHHHHHHHHHHhhCchhhceeEEEEECCCCchHHHHH---H------hcCCCEEEEECCC---
Confidence 46789999999994 55 8888888873 2223 235666766655432221 1 2467888875321
Q ss_pred ecCccHHHHHHHHHHHHHhCCCCCceEEeccCCcccc
Q 015070 143 YRGPTMVANTLHACAILLKNSKDWDWFINLSASDYPL 179 (413)
Q Consensus 143 wgg~S~V~AtL~~~~~lL~~~~~wdyfi~LSgsDyPL 179 (413)
..+...|-..+++.+ .-||++.|.+.+.+-
T Consensus 131 --n~G~~~A~N~G~~~A-----~gd~i~flD~D~~~~ 160 (501)
T 2ffu_A 131 --REGLMRSRVRGADAA-----QAKVLTFLDSHCECN 160 (501)
T ss_dssp --CCHHHHHHHHHHHHC-----CSSEEEECCSSEEEC
T ss_pred --CcCHHHHHHHHHHhc-----CCCEEEEECCCcccC
Confidence 234566666666554 248999999988763
No 11
>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A
Probab=46.84 E-value=96 Score=27.21 Aligned_cols=90 Identities=17% Similarity=0.152 Sum_probs=50.8
Q ss_pred HHHHHHHHHHc-CC-CCeEEEEEcCCCChHHHHHHHhhhccCCCcccccceEeeCccceeeecCccHHHHHHHHHHHHHh
Q 015070 84 EKLWRTLQALY-HP-RNRYVLHLDLEAPTEERLELASRVEKDPMFSKVGNVYMSTKANMVTYRGPTMVANTLHACAILLK 161 (413)
Q Consensus 84 ~~l~RLL~aLy-~p-~n~y~IHlD~ks~~~~~~~L~~~v~~~~~~~~~~NV~vv~~~~~V~wgg~S~V~AtL~~~~~lL~ 161 (413)
..+.+.++++. ++ -..++|-.+. .+ ++.+++ .+ ++.++........++.++..+..++++.+ .
T Consensus 30 pll~~~l~~~~~~~~~~~ivvv~~~----~~---i~~~~~------~~-~~~~~~~~~~~~~~~~g~~~sv~~~l~~~-~ 94 (228)
T 1ezi_A 30 SLLGHTINAAISSKCFDRIIVSTDG----GL---IAEEAK------NF-GVEVVLRPAELASDTASSISGVIHALETI-G 94 (228)
T ss_dssp EHHHHHHHHHHHHCCCSEEEEEESC----HH---HHHHHH------HT-TCEEEECCC------CHHHHHHHHHHHHH-T
T ss_pred CHHHHHHHHHHhCCCCCEEEEECCC----HH---HHHHHH------Hc-CCEEEeCchHHcCCCCChHHHHHHHHHHh-C
Confidence 47777887774 23 2577777753 11 122221 11 23333333334456777777777777776 2
Q ss_pred CCCCCceEEeccCCcccccchhHHHHHHhc
Q 015070 162 NSKDWDWFINLSASDYPLVTQDDLLYTFSG 191 (413)
Q Consensus 162 ~~~~wdyfi~LSgsDyPLkt~~~i~~~f~~ 191 (413)
.+.|+++.+ ..|.|+.+.+.|.+.+..
T Consensus 95 --~~~d~vlv~-~~D~P~~~~~~i~~l~~~ 121 (228)
T 1ezi_A 95 --SNSGTVTLL-QPTSPLRTGAHIREAFSL 121 (228)
T ss_dssp --CCSEEEEEC-CTTCTTCCHHHHHHHHTT
T ss_pred --CCCCEEEEE-cCCCCcCCHHHHHHHHHH
Confidence 345776655 469999999999887754
No 12
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=35.35 E-value=2.1e+02 Score=26.79 Aligned_cols=116 Identities=6% Similarity=-0.025 Sum_probs=64.6
Q ss_pred CCCcEEEEEEeeCCCHHHHHHHHHHHcC---CCCeEEEEEcCCCChHHHHHHHhhhccCCCcccccceEeeCccceeeec
Q 015070 68 KIPRFAYLVSGSKGDLEKLWRTLQALYH---PRNRYVLHLDLEAPTEERLELASRVEKDPMFSKVGNVYMSTKANMVTYR 144 (413)
Q Consensus 68 ~~~kiAYLI~~hk~d~~~l~RLL~aLy~---p~n~y~IHlD~ks~~~~~~~L~~~v~~~~~~~~~~NV~vv~~~~~V~wg 144 (413)
..|++..+|-+|+ ..+.|.++|+.+.. |...=+|-||..|++...+.++.+.. ....++.++.. . -.-.
T Consensus 46 ~~~~vSViIp~yN-~~~~l~~~l~sl~~q~~~~~~eiivVDdgS~D~t~~~~~~~~~-----~~~~~~~~~~~-~-~~n~ 117 (329)
T 3ckj_A 46 AGRTISVVLPALD-EEDTIGSVIDSISPLVDGLVDELIVLDSGSTDDTEIRAVAAGA-----RVVSREQALPE-V-PIRP 117 (329)
T ss_dssp TTCCEEEEEEESS-CTTTHHHHHHHHGGGBTTTBSEEEEEECSCCSSHHHHHHHTTC-----EEEEHHHHCTT-S-CCCC
T ss_pred cCCcEEEEEeeCC-CHHHHHHHHHHHHHhhCCCCcEEEEEeCCCCchHHHHHHHhhh-----hhccceeeecc-C-CCCC
Confidence 4589999999999 57889999988853 43233444777676655444443210 11123333210 0 1122
Q ss_pred CccHHHHHHHHHHHHHhCCCCCceEEeccCCcccc--cchhHHHHHHhccCCCcceE
Q 015070 145 GPTMVANTLHACAILLKNSKDWDWFINLSASDYPL--VTQDDLLYTFSGLSRKLNFI 199 (413)
Q Consensus 145 g~S~V~AtL~~~~~lL~~~~~wdyfi~LSgsDyPL--kt~~~i~~~f~~~~~~~nFI 199 (413)
| ...|.-.+++.+ .-||++.|.+.|..+ -....+.+.+.+ +.+...+
T Consensus 118 G--~~~a~n~g~~~a-----~gd~i~~lD~D~~~~~p~~l~~l~~~l~~-~~~~~~v 166 (329)
T 3ckj_A 118 G--KGEALWRSLAAS-----RGDIVVFVDSDLINPHPMFVPWLVGPLLT-GDGVHLV 166 (329)
T ss_dssp S--HHHHHHHHHHHC-----CCSEEEECCTTEESCCTTHHHHHHHHHHS-CSSCCEE
T ss_pred C--HHHHHHHHHHhC-----CCCEEEEECCCCCCcChHHHHHHHHHHHh-CCCccEE
Confidence 3 444444444443 248999999999833 334566666533 3344444
No 13
>1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13
Probab=29.72 E-value=2.1e+02 Score=25.13 Aligned_cols=89 Identities=11% Similarity=0.066 Sum_probs=45.1
Q ss_pred HHHHHHHHHHc-CCC-CeEEEEEcCCCChHHHHHHHhhhccCCCcccccceEeeCccceeeecCccHHHHHHHHHHHHHh
Q 015070 84 EKLWRTLQALY-HPR-NRYVLHLDLEAPTEERLELASRVEKDPMFSKVGNVYMSTKANMVTYRGPTMVANTLHACAILLK 161 (413)
Q Consensus 84 ~~l~RLL~aLy-~p~-n~y~IHlD~ks~~~~~~~L~~~v~~~~~~~~~~NV~vv~~~~~V~wgg~S~V~AtL~~~~~lL~ 161 (413)
..+.+.++++. .+. ..++|-.|. .. +++.++ .+ ++.++.......-++.+...+..+++..+
T Consensus 29 pli~~~i~~~~~~~~~~~ivv~~~~---~~----i~~~~~------~~-g~~~~~~~~~~~~~~~~~~~~v~~al~~~-- 92 (229)
T 1qwj_A 29 PLIGWVLRAALDAGVFQSVWVSTDH---DE----IENVAK------QF-GAQVHRRSSETSKDSSTSLDAIVEFLNYH-- 92 (229)
T ss_dssp EHHHHHHHHHHHHTCCSEEEEEESC---HH----HHHHHH------HT-TCEEEECCGGGSSTTCCHHHHHHHHHTTC--
T ss_pred EHHHHHHHHHHhCCCcCEEEEECCh---HH----HHHHHH------Hc-CCEEEeChhhhcCCCCcHHHHHHHHHHhc--
Confidence 46777777764 232 566666642 11 222221 11 33333222111123334444444433332
Q ss_pred CCCCCceEEeccCCcccccchhHHHHHHhc
Q 015070 162 NSKDWDWFINLSASDYPLVTQDDLLYTFSG 191 (413)
Q Consensus 162 ~~~~wdyfi~LSgsDyPLkt~~~i~~~f~~ 191 (413)
.+.|+++.+. .|.|+.+.+.|.+.+..
T Consensus 93 --~~~d~vlv~~-~D~Pli~~~~i~~l~~~ 119 (229)
T 1qwj_A 93 --NEVDIVGNIQ-ATSPCLHPTDLQKVAEM 119 (229)
T ss_dssp --TTCSEEEEEC-TTCTTCCHHHHHHHHHH
T ss_pred --CCCCEEEEec-CCCCcCCHHHHHHHHHH
Confidence 2468877775 59999998888776643
No 14
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=27.32 E-value=1.5e+02 Score=29.01 Aligned_cols=116 Identities=12% Similarity=0.042 Sum_probs=62.4
Q ss_pred CCcEEEEEEeeCCCHHHHHHHHHHHcC-----CCCeEEEEEcCCCChHHHHHHHhhhccCCCcccccceEeeCccceeee
Q 015070 69 IPRFAYLVSGSKGDLEKLWRTLQALYH-----PRNRYVLHLDLEAPTEERLELASRVEKDPMFSKVGNVYMSTKANMVTY 143 (413)
Q Consensus 69 ~~kiAYLI~~hk~d~~~l~RLL~aLy~-----p~n~y~IHlD~ks~~~~~~~L~~~v~~~~~~~~~~NV~vv~~~~~V~w 143 (413)
.|++..+|-+|+ ..+.|.++|+.|.. |.+.=+|-||..|++...+.++.+... + ....+.++.. -..
T Consensus 93 ~p~vSVVIP~yN-e~~~l~~~l~sl~~~l~~~~~~~EIIVVDDgStD~T~~i~~~~~~~--v--~~~~~~~i~~---~~n 164 (387)
T 3f1y_A 93 GLTVSAVLPSRN-VADTVGGIIDEIHALNERAPLIDQILVVDADSEDGTAGVAASHGAE--V--YSENELMSGY---GDA 164 (387)
T ss_dssp TCCEEEEEEESS-CTTTHHHHHHHHHHHHHHSCCCSEEEEEECSCSSSHHHHHHHTTCE--E--EEGGGTTGGG---CSC
T ss_pred CCeEEEEEEcCC-CHHHHHHHHHHHHHHHhcCCCCeEEEEEcCcCCccHHHHHHHhCch--h--cccceeEecC---Ccc
Confidence 589999999998 56778888877732 334445667766666554444432100 0 0011111111 112
Q ss_pred cCccHHHHHHHHHHHHHhCCCCCceEEeccCCcc--cccchhHHHHHHhccCCCcceEE
Q 015070 144 RGPTMVANTLHACAILLKNSKDWDWFINLSASDY--PLVTQDDLLYTFSGLSRKLNFIE 200 (413)
Q Consensus 144 gg~S~V~AtL~~~~~lL~~~~~wdyfi~LSgsDy--PLkt~~~i~~~f~~~~~~~nFIe 200 (413)
.| .-.|...+++. ..-||++.|.+.+. +-.....+.+.+.+ +.+..++-
T Consensus 165 ~G--~g~A~n~G~~~-----A~gd~i~~lDaD~~~~~p~~L~~l~~~l~~-~p~~d~v~ 215 (387)
T 3f1y_A 165 HG--KGDAMWRALSV-----TRGDLVLYIDADTRDFRPQLAYGVLGPVLE-VPGVRFVK 215 (387)
T ss_dssp CS--HHHHHHHHTTT-----CCSSEEEECCTTCSSCCTHHHHTTHHHHHH-STTCCEEE
T ss_pred CC--HHHHHHHHHHh-----cCCCEEEEEcCCCCcCCHHHHHHHHHHHHH-CCCceEEE
Confidence 23 33444433333 24699999999887 33344556666643 23455553
No 15
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...
Probab=27.10 E-value=2.4e+02 Score=26.22 Aligned_cols=26 Identities=19% Similarity=0.028 Sum_probs=22.4
Q ss_pred CCCcEEEEEEeeCCCHHHHHHHHHHHc
Q 015070 68 KIPRFAYLVSGSKGDLEKLWRTLQALY 94 (413)
Q Consensus 68 ~~~kiAYLI~~hk~d~~~l~RLL~aLy 94 (413)
+.++++.+|.+++ ..+.|.++|+.|.
T Consensus 63 ~~~~VSIIIP~yN-~~~~L~~~L~sl~ 88 (287)
T 2fy7_A 63 SPHKVAIIIPFRN-RQEHLKYWLYYLH 88 (287)
T ss_dssp CSCEEEEEEEESS-CHHHHHHHHHHHH
T ss_pred cCCcEEEEEeeCC-CHHHHHHHHHHHH
Confidence 3579999999998 6899999999886
No 16
>1jsd_A Haemagglutinin (HA1 chain); viral protein; HET: NAG; 1.80A {Influenza a virus} SCOP: b.19.1.2 PDB: 1jsh_A* 1jsi_A*
Probab=22.41 E-value=40 Score=32.69 Aligned_cols=44 Identities=18% Similarity=0.446 Sum_probs=34.7
Q ss_pred CCCCceEEec----cCCccc--ccchhHHHHHHhccCCCcceEEeecCCCC
Q 015070 163 SKDWDWFINL----SASDYP--LVTQDDLLYTFSGLSRKLNFIEHTSHLGW 207 (413)
Q Consensus 163 ~~~wdyfi~L----SgsDyP--Lkt~~~i~~~f~~~~~~~nFIe~~~~~~w 207 (413)
...|||+|=- .|.||| +...++|.+.|++. ++.++|+..+...|
T Consensus 73 ~~~WsyiVEr~~~~ng~CYPG~~~d~eeLR~l~ss~-~s~er~~~~p~~~W 122 (319)
T 1jsd_A 73 GREWSYIVERPSAVNGMCYPGNVENLEELRSLFSSA-SSYQRIQIFPDTIW 122 (319)
T ss_dssp CEECSSEEECTTCCBSCCSSCCBTTHHHHHHHHHHS-SEEEEEESSCGGGC
T ss_pred CCceEEEEeCCCCCCCcccCcccCCHHHHHHHHhcc-CccceEEecCCcee
Confidence 3679999984 578999 67889999999764 67888887765556
No 17
>1iio_A Conserved hypothetical protein MTH865; 4-helical bundle, monomer, structural genomics, unknown function; NMR {Methanothermobacterthermautotrophicus str} SCOP: a.39.4.1
Probab=22.24 E-value=27 Score=27.34 Aligned_cols=16 Identities=19% Similarity=0.698 Sum_probs=14.5
Q ss_pred CCcccccchhHHHHHH
Q 015070 174 ASDYPLVTQDDLLYTF 189 (413)
Q Consensus 174 gsDyPLkt~~~i~~~f 189 (413)
|.+||++|+.||...|
T Consensus 22 ~a~FPI~s~~EL~~Al 37 (84)
T 1iio_A 22 GADFPINSPEELMAAL 37 (84)
T ss_dssp TSSSTTBHHHHHHHHC
T ss_pred CCCCCCCCHHHHHHhC
Confidence 6899999999998876
No 18
>3bed_A PTS system, IIA component; mannose/sorbose, phosphotransferase system, structural genom APC28805, PSI-2, protein structure initiative; HET: MSE MLY; 1.45A {Enterococcus faecalis} SCOP: c.54.1.1
Probab=21.79 E-value=3.4e+02 Score=22.34 Aligned_cols=94 Identities=9% Similarity=0.066 Sum_probs=57.9
Q ss_pred CcEEEEEEeeCCCHHHHHHHHHHHcCC-CCeEEEEEcCCCCh-HHHHHHHhhhccCCCcccccceEeeCccceeeecCc-
Q 015070 70 PRFAYLVSGSKGDLEKLWRTLQALYHP-RNRYVLHLDLEAPT-EERLELASRVEKDPMFSKVGNVYMSTKANMVTYRGP- 146 (413)
Q Consensus 70 ~kiAYLI~~hk~d~~~l~RLL~aLy~p-~n~y~IHlD~ks~~-~~~~~L~~~v~~~~~~~~~~NV~vv~~~~~V~wgg~- 146 (413)
|++..+|.+|.+=.+-+...++.+.-+ .+...|-+....+. ...+++.+.++.. .. ..|-|+.+ . |||.
T Consensus 4 M~i~iiivsHG~~A~gl~~~~~~i~G~~~~i~ai~~~~~~~~~~~~~~i~~~i~~~---~~-~gvliLtD---l-~GGSp 75 (142)
T 3bed_A 4 MXPKLILMSHGRMAEETLASTQMIVGELADAAIVSMTAEDGLSGTQAKLAAILKEA---GN-VPTLVLAD---L-XGGTP 75 (142)
T ss_dssp CCSEEEEEEETTHHHHHHHHHHHHHCTTCCCEEEEECTTTHHHHHHHHHHHHHHHH---CS-CCEEEEES---S-TTSHH
T ss_pred CcccEEEEcChHHHHHHHHHHHHHcCCCCCEEEEEecCCCCHHHHHHHHHHHHHhc---CC-CCEEEEEE---C-CCCHH
Confidence 667899999995567888899988765 55556666554433 3456666666532 13 56776643 2 3443
Q ss_pred cHHHHHHHHHHHHHhCCCCCceEEeccCCccccc
Q 015070 147 TMVANTLHACAILLKNSKDWDWFINLSASDYPLV 180 (413)
Q Consensus 147 S~V~AtL~~~~~lL~~~~~wdyfi~LSgsDyPLk 180 (413)
..+.. .++... .-+..++|-..|+.
T Consensus 76 ~n~a~------~~~~~~---~~v~vi~GvNlpml 100 (142)
T 3bed_A 76 CNVAM------MAMGTY---PQLRVVAGLNLAMA 100 (142)
T ss_dssp HHHHH------HHTTTC---TTEEEEESCCHHHH
T ss_pred HHHHH------HHhccC---CCEEEEeCCCHHHH
Confidence 33321 223221 35788999999975
No 19
>3ku3_A Hemagglutinin HA1 chain; viral envelope protein, viral fusion protein, protein, viral protein; HET: NAG; 1.60A {Influenza a virus} SCOP: b.19.1.2 PDB: 3qqb_A* 3qqe_A* 3qqo_A* 3ku6_A* 3ku5_A* 1jsm_A* 1jsn_A* 1jso_A* 3qqi_A*
Probab=20.36 E-value=47 Score=32.29 Aligned_cols=44 Identities=14% Similarity=0.421 Sum_probs=32.2
Q ss_pred CCCCceEEe----ccCCccc--ccchhHHHHHHhccCCCcceEEeecCCCC
Q 015070 163 SKDWDWFIN----LSASDYP--LVTQDDLLYTFSGLSRKLNFIEHTSHLGW 207 (413)
Q Consensus 163 ~~~wdyfi~----LSgsDyP--Lkt~~~i~~~f~~~~~~~nFIe~~~~~~w 207 (413)
...|||+|- -.|.||| +...++|.+.|++. ++.++|+..+...|
T Consensus 75 ~~~WsyIVEr~~a~ng~CYPG~~~d~eeLR~l~ss~-~~~erieifp~~~W 124 (327)
T 3ku3_A 75 VPEWSYIMEKENPRDGLCYPGSFNDYEELKHLLSSV-KHFEKVKILPKDRW 124 (327)
T ss_dssp CCCCSCEEECSSCSBSCSSCEEETTHHHHHHHHTTE-EEEEEECCSCGGGC
T ss_pred CceeEEEEEcCCCCCCcccCCccCCHHHHHHHHhcc-CCceeEEecCCCcc
Confidence 468999998 4567999 57778898888753 56777876544345
No 20
>2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A*
Probab=20.16 E-value=1.3e+02 Score=26.13 Aligned_cols=95 Identities=13% Similarity=0.056 Sum_probs=52.3
Q ss_pred HHHHHHHHHHcC-C-CCeEEEEEcCCCChHHHHHHHhhhccCCCcccccceEeeCccceeeecCccHHHHHHHHHHHHHh
Q 015070 84 EKLWRTLQALYH-P-RNRYVLHLDLEAPTEERLELASRVEKDPMFSKVGNVYMSTKANMVTYRGPTMVANTLHACAILLK 161 (413)
Q Consensus 84 ~~l~RLL~aLy~-p-~n~y~IHlD~ks~~~~~~~L~~~v~~~~~~~~~~NV~vv~~~~~V~wgg~S~V~AtL~~~~~lL~ 161 (413)
..+.+.++++.. + -..++|-.+.+.. ..++.+++. + ++.+. ......-+|-++..+..++++.+-+
T Consensus 32 pli~~~l~~l~~~~~~~~i~vv~~~~~~----~~~~~~~~~------~-~~~~~-~~~~~~~~~~~~~~~i~~~l~~~~~ 99 (236)
T 2vsh_A 32 PILIHTIEKFVLEPSIEKIVVGVHGDWV----SHAEDLVDK------Y-LPLYK-ERIIITKGGADRNTSIKNIIEAIDA 99 (236)
T ss_dssp EHHHHHHHHHHTCTTCCCEEEEECGGGH----HHHHHHHHH------H-CGGGG-GGEEEEECCSSHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHcCCCCCeEEEEeCHHHH----HHHHHHHHh------c-ccccc-CceEEECCCCchHHHHHHHHHHHHh
Confidence 588888888863 3 3566666665431 122222211 1 11110 0112334566777787777776643
Q ss_pred CCC--CCceEEeccCCcccccchhHHHHHHhc
Q 015070 162 NSK--DWDWFINLSASDYPLVTQDDLLYTFSG 191 (413)
Q Consensus 162 ~~~--~wdyfi~LSgsDyPLkt~~~i~~~f~~ 191 (413)
... +.++++. ...|.|+.+.+.+.+.+..
T Consensus 100 ~~~~~~~~~vlv-~~~D~P~~~~~~i~~l~~~ 130 (236)
T 2vsh_A 100 YRPLTPEDIVVT-HDSVRPFITLRMIQDNIQL 130 (236)
T ss_dssp HSCCCTTCEEEE-EETTCTTCCHHHHHHHHHH
T ss_pred hccCCCCCEEEE-ecCCcccCCHHHHHHHHHH
Confidence 212 3465554 4679999999888776643
Done!