Query 015072
Match_columns 413
No_of_seqs 248 out of 2765
Neff 10.6
Searched_HMMs 29240
Date Mon Mar 25 06:10:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015072.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015072hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2gf3_A MSOX, monomeric sarcosi 100.0 6.8E-46 2.3E-50 347.5 37.2 372 7-394 3-381 (389)
2 3nyc_A D-arginine dehydrogenas 100.0 9.9E-46 3.4E-50 345.5 33.5 363 6-392 8-380 (381)
3 1y56_B Sarcosine oxidase; dehy 100.0 5.2E-45 1.8E-49 340.6 36.8 372 4-400 2-378 (382)
4 2oln_A NIKD protein; flavoprot 100.0 3.6E-44 1.2E-48 336.5 40.1 368 6-394 3-391 (397)
5 2uzz_A N-methyl-L-tryptophan o 100.0 9.1E-45 3.1E-49 337.8 34.7 362 7-392 2-372 (372)
6 2gag_B Heterotetrameric sarcos 100.0 1E-41 3.4E-46 320.9 37.9 371 6-402 20-400 (405)
7 3axb_A Putative oxidoreductase 100.0 1.7E-41 5.9E-46 323.2 31.5 369 6-395 22-445 (448)
8 3dje_A Fructosyl amine: oxygen 100.0 1.3E-40 4.6E-45 316.2 36.2 368 4-391 3-398 (438)
9 3ps9_A TRNA 5-methylaminomethy 100.0 1E-40 3.5E-45 332.3 32.7 365 7-402 272-673 (676)
10 3pvc_A TRNA 5-methylaminomethy 100.0 1.2E-40 4E-45 332.1 32.4 365 7-403 264-678 (689)
11 1ryi_A Glycine oxidase; flavop 100.0 9.7E-41 3.3E-45 311.7 28.6 355 6-394 16-380 (382)
12 3dme_A Conserved exported prot 100.0 4.2E-38 1.4E-42 292.5 33.0 345 6-374 3-368 (369)
13 1pj5_A N,N-dimethylglycine oxi 100.0 2.3E-38 7.8E-43 322.1 33.7 372 6-394 3-396 (830)
14 3g3e_A D-amino-acid oxidase; F 100.0 4.6E-36 1.6E-40 276.6 17.1 312 8-375 1-332 (351)
15 3c4n_A Uncharacterized protein 100.0 2.7E-35 9.2E-40 276.2 18.4 326 6-378 35-399 (405)
16 1c0p_A D-amino acid oxidase; a 100.0 9.9E-34 3.4E-38 262.2 20.6 319 4-374 3-355 (363)
17 2qcu_A Aerobic glycerol-3-phos 100.0 8.6E-30 2.9E-34 244.9 32.3 344 7-376 3-372 (501)
18 2rgh_A Alpha-glycerophosphate 100.0 3.5E-29 1.2E-33 243.4 34.8 342 6-375 31-410 (571)
19 3da1_A Glycerol-3-phosphate de 100.0 1.1E-27 3.8E-32 232.4 28.3 343 5-375 16-390 (561)
20 3ihg_A RDME; flavoenzyme, anth 99.8 7.8E-17 2.7E-21 156.3 26.8 222 148-390 115-355 (535)
21 3nix_A Flavoprotein/dehydrogen 99.8 1.4E-17 4.9E-22 156.8 20.3 209 148-375 101-324 (421)
22 3cgv_A Geranylgeranyl reductas 99.8 1.7E-17 5.7E-22 155.2 17.7 287 7-374 4-312 (397)
23 3fmw_A Oxygenase; mithramycin, 99.7 5.2E-17 1.8E-21 157.6 18.3 312 6-390 48-376 (570)
24 2qa2_A CABE, polyketide oxygen 99.7 2.7E-15 9.2E-20 143.6 25.7 306 5-391 10-333 (499)
25 3i3l_A Alkylhalidase CMLS; fla 99.7 4.6E-17 1.6E-21 158.2 13.6 209 146-375 121-344 (591)
26 3ka7_A Oxidoreductase; structu 99.7 2.9E-16 9.9E-21 148.1 17.9 206 153-374 196-424 (425)
27 3i6d_A Protoporphyrinogen oxid 99.7 3.2E-16 1.1E-20 149.8 18.2 204 154-374 236-465 (470)
28 2qa1_A PGAE, polyketide oxygen 99.7 3.1E-15 1E-19 143.3 24.9 307 4-391 8-332 (500)
29 3rp8_A Flavoprotein monooxygen 99.7 2.9E-16 9.8E-21 147.2 15.9 61 148-214 122-182 (407)
30 3oz2_A Digeranylgeranylglycero 99.7 1.6E-16 5.5E-21 148.4 14.0 200 148-374 97-312 (397)
31 3atr_A Conserved archaeal prot 99.7 8.7E-15 3E-19 138.9 24.3 200 147-374 94-317 (453)
32 2weu_A Tryptophan 5-halogenase 99.7 9.4E-17 3.2E-21 155.0 9.7 203 147-376 167-375 (511)
33 3lov_A Protoporphyrinogen oxid 99.6 4.3E-15 1.5E-19 142.2 17.4 205 154-376 237-464 (475)
34 3e1t_A Halogenase; flavoprotei 99.6 3.7E-15 1.2E-19 143.6 16.9 175 1-220 1-178 (512)
35 3nks_A Protoporphyrinogen oxid 99.6 6E-15 2E-19 141.2 18.1 213 153-376 234-473 (477)
36 3v76_A Flavoprotein; structura 99.6 5.4E-15 1.8E-19 137.9 16.0 158 4-213 24-187 (417)
37 2gmh_A Electron transfer flavo 99.6 2.7E-14 9.2E-19 139.2 19.6 65 148-214 139-218 (584)
38 3alj_A 2-methyl-3-hydroxypyrid 99.6 5.3E-14 1.8E-18 130.4 18.7 65 148-220 102-166 (379)
39 2x3n_A Probable FAD-dependent 99.6 6.1E-15 2.1E-19 137.8 12.4 71 148-224 102-175 (399)
40 2aqj_A Tryptophan halogenase, 99.6 5.2E-15 1.8E-19 143.5 12.2 214 144-386 156-377 (538)
41 2e4g_A Tryptophan halogenase; 99.6 1.6E-14 5.5E-19 140.2 14.3 66 147-215 188-254 (550)
42 2dkh_A 3-hydroxybenzoate hydro 99.6 9.1E-14 3.1E-18 137.1 19.6 74 148-225 136-221 (639)
43 2r0c_A REBC; flavin adenine di 99.5 3.6E-13 1.2E-17 130.6 20.6 70 148-226 133-207 (549)
44 2i0z_A NAD(FAD)-utilizing dehy 99.5 8.4E-14 2.9E-18 131.7 15.4 167 6-213 25-191 (447)
45 3nrn_A Uncharacterized protein 99.5 6.5E-14 2.2E-18 131.8 14.2 57 152-214 188-244 (421)
46 1qo8_A Flavocytochrome C3 fuma 99.5 3.1E-13 1E-17 131.7 19.1 189 6-214 120-313 (566)
47 2gqf_A Hypothetical protein HI 99.5 1.2E-13 4.2E-18 128.3 15.1 158 6-213 3-168 (401)
48 1pn0_A Phenol 2-monooxygenase; 99.5 2.2E-12 7.5E-17 127.5 24.5 37 6-42 7-48 (665)
49 1y0p_A Fumarate reductase flav 99.5 7.8E-13 2.7E-17 129.0 20.3 182 6-214 125-318 (571)
50 1yvv_A Amine oxidase, flavin-c 99.5 5.7E-12 2E-16 114.7 24.8 41 7-47 2-42 (336)
51 4dgk_A Phytoene dehydrogenase; 99.5 5.3E-13 1.8E-17 128.5 18.5 58 153-213 221-278 (501)
52 3c96_A Flavin-containing monoo 99.5 5.5E-13 1.9E-17 124.9 15.6 62 148-214 102-170 (410)
53 3nlc_A Uncharacterized protein 99.5 9.4E-13 3.2E-17 126.1 15.9 165 6-215 106-279 (549)
54 2wdq_A Succinate dehydrogenase 99.5 1.8E-12 6.2E-17 126.2 18.1 199 1-216 1-209 (588)
55 2pyx_A Tryptophan halogenase; 99.5 8.4E-13 2.9E-17 127.5 15.4 65 147-214 169-234 (526)
56 4hb9_A Similarities with proba 99.4 3.8E-12 1.3E-16 119.2 19.0 63 151-220 110-172 (412)
57 4at0_A 3-ketosteroid-delta4-5a 99.4 3.6E-13 1.2E-17 129.5 11.9 59 154-214 203-265 (510)
58 4gde_A UDP-galactopyranose mut 99.4 5.8E-13 2E-17 128.6 13.5 49 1-49 4-53 (513)
59 1k0i_A P-hydroxybenzoate hydro 99.4 2.9E-13 1E-17 126.1 10.7 67 150-220 100-169 (394)
60 2bs2_A Quinol-fumarate reducta 99.4 6.5E-13 2.2E-17 130.4 11.5 193 5-215 3-222 (660)
61 2vou_A 2,6-dihydroxypyridine h 99.4 6.8E-12 2.3E-16 116.9 17.4 58 151-214 97-154 (397)
62 1d4d_A Flavocytochrome C fumar 99.4 2.4E-12 8.2E-17 125.3 14.8 189 6-214 125-318 (572)
63 4a9w_A Monooxygenase; baeyer-v 99.4 1.3E-12 4.4E-17 119.9 12.2 65 151-220 74-139 (357)
64 1chu_A Protein (L-aspartate ox 99.4 2.1E-12 7.2E-17 124.6 13.5 186 5-214 6-209 (540)
65 2h88_A Succinate dehydrogenase 99.4 4.2E-12 1.4E-16 123.8 15.6 193 6-215 17-219 (621)
66 3qj4_A Renalase; FAD/NAD(P)-bi 99.4 4.8E-12 1.6E-16 115.5 14.7 160 8-212 2-164 (342)
67 2bcg_G Secretory pathway GDP d 99.4 4.9E-12 1.7E-16 119.8 14.6 61 153-216 242-303 (453)
68 1rp0_A ARA6, thiazole biosynth 99.4 1.1E-11 3.6E-16 109.9 14.9 38 6-43 38-76 (284)
69 3p1w_A Rabgdi protein; GDI RAB 99.3 4E-11 1.4E-15 112.4 17.8 58 153-212 256-313 (475)
70 1kf6_A Fumarate reductase flav 99.3 1.2E-11 4.1E-16 120.7 14.5 188 6-215 4-199 (602)
71 3gyx_A Adenylylsulfate reducta 99.3 1.2E-11 4.1E-16 121.4 13.8 187 6-214 21-234 (662)
72 3k7m_X 6-hydroxy-L-nicotine ox 99.3 1.1E-11 3.8E-16 116.9 13.0 41 8-48 2-42 (431)
73 3gwf_A Cyclohexanone monooxyge 99.3 9.3E-12 3.2E-16 120.0 12.6 147 6-222 7-156 (540)
74 3o0h_A Glutathione reductase; 99.3 1.4E-11 4.6E-16 117.9 13.4 58 153-214 232-289 (484)
75 2zbw_A Thioredoxin reductase; 99.3 2.1E-11 7.2E-16 110.9 13.8 120 4-213 2-121 (335)
76 2e5v_A L-aspartate oxidase; ar 99.3 4.2E-11 1.4E-15 113.8 15.9 175 9-214 1-177 (472)
77 4ap3_A Steroid monooxygenase; 99.3 1.8E-11 6.2E-16 118.2 13.3 68 151-220 97-166 (549)
78 3ab1_A Ferredoxin--NADP reduct 99.3 3.8E-11 1.3E-15 110.4 14.8 120 5-213 12-131 (360)
79 2xdo_A TETX2 protein; tetracyc 99.3 3E-11 1E-15 112.6 14.3 59 150-214 125-183 (398)
80 3uox_A Otemo; baeyer-villiger 99.3 7.9E-12 2.7E-16 120.6 10.7 70 151-222 85-156 (545)
81 1s3e_A Amine oxidase [flavin-c 99.3 4.3E-11 1.5E-15 115.6 15.8 45 6-50 3-47 (520)
82 4fk1_A Putative thioredoxin re 99.3 2.8E-11 9.6E-16 108.5 12.5 39 4-42 3-41 (304)
83 1mo9_A ORF3; nucleotide bindin 99.3 4.3E-11 1.5E-15 115.4 14.6 66 152-220 254-325 (523)
84 2cul_A Glucose-inhibited divis 99.3 5.9E-11 2E-15 101.8 13.8 61 151-215 66-127 (232)
85 1w4x_A Phenylacetone monooxyge 99.3 1E-11 3.5E-16 120.2 10.0 66 153-220 94-161 (542)
86 2gv8_A Monooxygenase; FMO, FAD 99.3 5.8E-11 2E-15 112.4 14.8 66 151-220 113-184 (447)
87 2ivd_A PPO, PPOX, protoporphyr 99.3 4E-11 1.4E-15 114.6 13.9 48 6-53 15-62 (478)
88 2vvm_A Monoamine oxidase N; FA 99.3 6.5E-11 2.2E-15 113.7 15.3 57 153-213 255-312 (495)
89 2ywl_A Thioredoxin reductase r 99.3 1.1E-10 3.8E-15 95.9 14.6 62 152-220 55-116 (180)
90 2zxi_A TRNA uridine 5-carboxym 99.3 1E-11 3.5E-16 119.4 9.1 61 149-213 119-180 (637)
91 3d1c_A Flavin-containing putat 99.3 2E-11 6.9E-16 112.6 10.9 59 151-214 86-144 (369)
92 3f8d_A Thioredoxin reductase ( 99.3 2.9E-11 9.9E-16 109.3 11.7 57 152-213 69-125 (323)
93 3lzw_A Ferredoxin--NADP reduct 99.3 3.2E-11 1.1E-15 109.4 12.0 117 6-212 6-122 (332)
94 1d5t_A Guanine nucleotide diss 99.2 6.9E-10 2.4E-14 104.3 19.8 59 153-216 234-293 (433)
95 1jnr_A Adenylylsulfate reducta 99.2 1.2E-10 4.1E-15 114.7 15.1 186 6-216 21-221 (643)
96 4a5l_A Thioredoxin reductase; 99.2 1.5E-10 5.1E-15 104.2 14.2 119 5-212 2-120 (314)
97 3ces_A MNMG, tRNA uridine 5-ca 99.2 2.1E-11 7.1E-16 117.8 8.9 62 148-213 119-181 (651)
98 2bry_A NEDD9 interacting prote 99.2 1.2E-10 4.1E-15 111.4 14.2 135 6-214 91-231 (497)
99 3cp8_A TRNA uridine 5-carboxym 99.2 2.9E-10 1E-14 109.7 16.4 62 148-214 112-175 (641)
100 2xve_A Flavin-containing monoo 99.2 9.9E-11 3.4E-15 111.1 12.4 71 150-222 98-175 (464)
101 4dna_A Probable glutathione re 99.2 1.5E-10 5.2E-15 109.9 13.6 59 152-214 210-269 (463)
102 4gut_A Lysine-specific histone 99.2 3.5E-10 1.2E-14 112.9 16.2 43 6-48 335-377 (776)
103 3lxd_A FAD-dependent pyridine 99.2 1.4E-09 4.8E-14 101.8 19.3 69 152-224 193-262 (415)
104 2q0l_A TRXR, thioredoxin reduc 99.2 1.1E-10 3.9E-15 104.8 11.4 58 151-213 57-114 (311)
105 3itj_A Thioredoxin reductase 1 99.2 1.2E-10 4E-15 106.0 11.6 57 152-213 83-142 (338)
106 1vdc_A NTR, NADPH dependent th 99.2 7E-11 2.4E-15 107.3 9.6 58 151-214 68-125 (333)
107 3fbs_A Oxidoreductase; structu 99.2 2E-10 6.8E-15 102.4 12.3 56 153-213 56-112 (297)
108 2yg5_A Putrescine oxidase; oxi 99.2 7.5E-10 2.6E-14 105.0 16.4 45 6-50 4-48 (453)
109 2b9w_A Putative aminooxidase; 99.2 4.9E-10 1.7E-14 105.3 14.9 49 5-53 4-53 (424)
110 3cty_A Thioredoxin reductase; 99.2 2.4E-10 8.2E-15 103.1 12.3 55 153-213 72-126 (319)
111 2jae_A L-amino acid oxidase; o 99.2 2E-10 6.8E-15 110.1 12.2 45 4-48 8-52 (489)
112 4dsg_A UDP-galactopyranose mut 99.1 5.4E-10 1.8E-14 106.5 14.8 44 5-48 7-51 (484)
113 2v3a_A Rubredoxin reductase; a 99.1 1.3E-09 4.3E-14 101.0 16.3 67 152-223 186-253 (384)
114 1rsg_A FMS1 protein; FAD bindi 99.1 9.2E-10 3.1E-14 106.1 15.8 45 6-50 7-52 (516)
115 1xdi_A RV3303C-LPDA; reductase 99.1 1.2E-09 4E-14 104.8 16.4 59 152-214 222-280 (499)
116 3jsk_A Cypbp37 protein; octame 99.1 1.3E-09 4.3E-14 97.5 15.3 37 7-43 79-117 (344)
117 2q7v_A Thioredoxin reductase; 99.1 2.6E-10 9E-15 103.1 11.1 58 153-213 65-123 (325)
118 3iwa_A FAD-dependent pyridine 99.1 6.7E-10 2.3E-14 105.8 14.3 65 152-220 201-266 (472)
119 4gcm_A TRXR, thioredoxin reduc 99.1 4.2E-10 1.5E-14 101.1 12.2 38 5-42 4-41 (312)
120 3urh_A Dihydrolipoyl dehydroge 99.1 5.5E-10 1.9E-14 107.0 13.6 59 152-214 238-301 (491)
121 1ges_A Glutathione reductase; 99.1 5E-10 1.7E-14 105.9 13.1 59 153-214 208-266 (450)
122 1zk7_A HGII, reductase, mercur 99.1 5.4E-10 1.8E-14 106.3 12.1 58 152-214 215-272 (467)
123 2hqm_A GR, grase, glutathione 99.1 5.2E-10 1.8E-14 106.7 11.7 60 153-214 226-286 (479)
124 2gjc_A Thiazole biosynthetic e 99.1 3.6E-09 1.2E-13 94.0 15.9 38 6-43 64-103 (326)
125 3fg2_P Putative rubredoxin red 99.1 7.2E-09 2.5E-13 96.6 18.9 70 152-225 183-253 (404)
126 3qvp_A Glucose oxidase; oxidor 99.1 9.4E-10 3.2E-14 106.3 13.0 36 5-40 17-53 (583)
127 4b1b_A TRXR, thioredoxin reduc 99.1 1.1E-09 3.7E-14 105.1 13.0 57 153-213 263-319 (542)
128 3ihm_A Styrene monooxygenase A 99.1 1E-10 3.5E-15 109.9 5.7 36 6-41 21-56 (430)
129 2a87_A TRXR, TR, thioredoxin r 99.1 8.6E-10 2.9E-14 100.2 11.5 55 153-213 71-126 (335)
130 1fl2_A Alkyl hydroperoxide red 99.1 9.8E-10 3.3E-14 98.6 11.6 59 153-213 56-115 (310)
131 1trb_A Thioredoxin reductase; 99.1 9.7E-10 3.3E-14 99.1 11.6 55 153-213 62-116 (320)
132 2yqu_A 2-oxoglutarate dehydrog 99.1 4.1E-09 1.4E-13 99.9 16.4 58 153-214 208-265 (455)
133 3lad_A Dihydrolipoamide dehydr 99.1 3.7E-09 1.3E-13 100.8 16.1 58 152-213 220-280 (476)
134 2r9z_A Glutathione amide reduc 99.0 2E-09 6.7E-14 102.2 13.7 58 153-214 207-265 (463)
135 3c4a_A Probable tryptophan hyd 99.0 1.6E-10 5.6E-15 106.9 5.8 51 149-214 94-144 (381)
136 1fec_A Trypanothione reductase 99.0 8.4E-10 2.9E-14 105.5 10.6 59 153-214 231-289 (490)
137 3dk9_A Grase, GR, glutathione 99.0 9.6E-09 3.3E-13 98.0 17.4 60 153-214 228-294 (478)
138 3ef6_A Toluene 1,2-dioxygenase 99.0 9.7E-09 3.3E-13 95.8 16.4 69 152-225 184-253 (410)
139 1hyu_A AHPF, alkyl hydroperoxi 99.0 2.8E-09 9.7E-14 102.5 13.1 59 153-213 267-326 (521)
140 3s5w_A L-ornithine 5-monooxyge 99.0 4.7E-10 1.6E-14 106.7 7.6 57 153-211 127-190 (463)
141 2qae_A Lipoamide, dihydrolipoy 99.0 2.6E-09 9E-14 101.6 12.4 58 153-214 215-277 (468)
142 3ics_A Coenzyme A-disulfide re 99.0 6.3E-09 2.2E-13 101.9 15.5 62 153-220 228-290 (588)
143 3dgh_A TRXR-1, thioredoxin red 99.0 9.7E-09 3.3E-13 98.1 16.2 60 152-214 226-290 (483)
144 3l8k_A Dihydrolipoyl dehydroge 99.0 2E-09 6.9E-14 102.3 10.9 38 6-43 3-40 (466)
145 1ojt_A Surface protein; redox- 99.0 2.1E-09 7E-14 102.7 10.9 40 4-43 3-42 (482)
146 2wpf_A Trypanothione reductase 99.0 5.8E-09 2E-13 99.7 13.9 59 153-214 235-293 (495)
147 3r9u_A Thioredoxin reductase; 99.0 2.5E-09 8.6E-14 96.1 10.7 57 151-212 60-117 (315)
148 1b37_A Protein (polyamine oxid 99.0 1.1E-08 3.9E-13 97.3 15.2 44 6-49 3-47 (472)
149 1v59_A Dihydrolipoamide dehydr 98.9 4E-09 1.4E-13 100.6 11.9 39 5-43 3-41 (478)
150 2iid_A L-amino-acid oxidase; f 98.9 9.2E-09 3.2E-13 98.7 13.5 45 5-49 31-75 (498)
151 3k30_A Histamine dehydrogenase 98.9 7.1E-09 2.4E-13 103.2 13.1 39 6-44 390-428 (690)
152 1onf_A GR, grase, glutathione 98.9 2.1E-08 7.3E-13 96.0 15.8 59 153-214 217-276 (500)
153 2jbv_A Choline oxidase; alcoho 98.9 7.3E-09 2.5E-13 100.1 12.5 37 6-42 12-49 (546)
154 3ic9_A Dihydrolipoamide dehydr 98.9 1.5E-08 5E-13 96.9 14.3 57 153-214 215-275 (492)
155 1zmd_A Dihydrolipoyl dehydroge 98.9 8.7E-09 3E-13 98.2 12.4 60 152-214 219-283 (474)
156 3qfa_A Thioredoxin reductase 1 98.9 1.7E-08 5.9E-13 97.1 14.2 35 6-40 31-65 (519)
157 1dxl_A Dihydrolipoamide dehydr 98.9 9.4E-09 3.2E-13 97.9 11.7 39 5-43 4-42 (470)
158 3ntd_A FAD-dependent pyridine 98.9 3.5E-08 1.2E-12 96.2 15.8 66 153-220 192-275 (565)
159 3h8l_A NADH oxidase; membrane 98.9 1.2E-08 4.1E-13 95.3 12.0 59 153-219 218-276 (409)
160 3kkj_A Amine oxidase, flavin-c 98.9 1.4E-09 4.9E-14 96.2 5.4 42 7-48 2-43 (336)
161 2a8x_A Dihydrolipoyl dehydroge 98.9 8.2E-09 2.8E-13 98.1 10.6 34 7-40 3-36 (464)
162 3dgz_A Thioredoxin reductase 2 98.9 2.2E-08 7.7E-13 95.6 13.7 36 5-40 4-39 (488)
163 2bc0_A NADH oxidase; flavoprot 98.8 5.1E-09 1.8E-13 100.1 8.7 36 6-41 34-72 (490)
164 3oc4_A Oxidoreductase, pyridin 98.8 6E-09 2E-13 98.6 8.9 35 8-42 3-39 (452)
165 1y56_A Hypothetical protein PH 98.8 1.3E-09 4.6E-14 104.1 4.4 61 161-226 265-326 (493)
166 3klj_A NAD(FAD)-dependent dehy 98.8 1E-08 3.4E-13 94.7 9.8 39 4-42 6-44 (385)
167 1ebd_A E3BD, dihydrolipoamide 98.8 1.4E-08 4.9E-13 96.1 11.1 34 7-40 3-36 (455)
168 3q9t_A Choline dehydrogenase a 98.8 4.7E-09 1.6E-13 101.5 7.0 37 5-41 4-41 (577)
169 3kd9_A Coenzyme A disulfide re 98.8 1.5E-08 5.1E-13 95.9 10.3 36 7-42 3-40 (449)
170 1q1r_A Putidaredoxin reductase 98.8 8.4E-09 2.9E-13 96.9 8.2 46 162-213 69-114 (431)
171 3cgb_A Pyridine nucleotide-dis 98.8 7.9E-08 2.7E-12 91.6 15.1 63 152-219 226-289 (480)
172 2eq6_A Pyruvate dehydrogenase 98.8 3.8E-08 1.3E-12 93.4 11.7 35 7-41 6-40 (464)
173 1kdg_A CDH, cellobiose dehydro 98.8 9.4E-08 3.2E-12 92.6 14.6 37 5-41 5-41 (546)
174 3sx6_A Sulfide-quinone reducta 98.8 1.2E-08 4.2E-13 96.0 7.8 34 7-40 4-40 (437)
175 3fim_B ARYL-alcohol oxidase; A 98.8 1.9E-08 6.6E-13 97.0 9.2 36 7-42 2-38 (566)
176 1v0j_A UDP-galactopyranose mut 98.7 9.6E-09 3.3E-13 95.4 6.4 51 1-51 1-52 (399)
177 3t37_A Probable dehydrogenase; 98.7 2.9E-08 1E-12 95.9 9.8 36 6-41 16-52 (526)
178 2gqw_A Ferredoxin reductase; f 98.7 1.6E-08 5.3E-13 94.4 7.0 41 1-41 1-43 (408)
179 1nhp_A NADH peroxidase; oxidor 98.7 3.9E-08 1.3E-12 92.9 9.4 35 8-42 1-37 (447)
180 1ju2_A HydroxynitrIle lyase; f 98.7 6.4E-08 2.2E-12 93.3 10.9 36 6-42 25-60 (536)
181 3hyw_A Sulfide-quinone reducta 98.7 1.6E-07 5.4E-12 88.2 13.1 61 154-220 201-263 (430)
182 2cdu_A NADPH oxidase; flavoenz 98.7 4.7E-08 1.6E-12 92.5 9.5 34 8-41 1-36 (452)
183 1lvl_A Dihydrolipoamide dehydr 98.7 4.2E-07 1.4E-11 86.1 15.5 35 6-40 4-38 (458)
184 1xhc_A NADH oxidase /nitrite r 98.7 6.9E-09 2.4E-13 95.2 2.9 34 7-41 8-41 (367)
185 1gpe_A Protein (glucose oxidas 98.6 2.1E-07 7.2E-12 90.6 11.6 37 6-42 23-60 (587)
186 3h28_A Sulfide-quinone reducta 98.6 2.7E-08 9.2E-13 93.5 4.9 34 8-41 3-38 (430)
187 3vrd_B FCCB subunit, flavocyto 98.6 2.1E-08 7.1E-13 93.4 4.2 56 161-220 210-265 (401)
188 1ps9_A 2,4-dienoyl-COA reducta 98.6 2.3E-06 7.9E-11 84.9 18.6 39 6-44 372-410 (671)
189 4eqs_A Coenzyme A disulfide re 98.6 2E-07 6.7E-12 87.6 10.4 54 153-214 188-241 (437)
190 1n4w_A CHOD, cholesterol oxida 98.6 1.2E-07 4.1E-12 90.8 8.9 36 6-41 4-39 (504)
191 4g6h_A Rotenone-insensitive NA 98.5 3.9E-07 1.3E-11 87.0 11.5 65 152-220 271-339 (502)
192 2eq6_A Pyruvate dehydrogenase 98.5 9.1E-07 3.1E-11 83.8 13.8 54 157-214 214-272 (464)
193 3hdq_A UDP-galactopyranose mut 98.5 1.1E-07 3.7E-12 87.4 7.0 44 6-49 28-71 (397)
194 1coy_A Cholesterol oxidase; ox 98.5 2.5E-07 8.5E-12 88.6 9.8 37 5-41 9-45 (507)
195 2x8g_A Thioredoxin glutathione 98.5 7.6E-07 2.6E-11 87.3 12.6 34 6-39 106-139 (598)
196 1q1r_A Putidaredoxin reductase 98.5 1.8E-06 6.1E-11 81.0 14.5 65 157-224 195-261 (431)
197 2e1m_A L-glutamate oxidase; L- 98.5 1.3E-07 4.3E-12 86.2 6.2 46 5-50 42-88 (376)
198 1o94_A Tmadh, trimethylamine d 98.5 1.7E-06 5.6E-11 86.6 14.5 39 6-44 388-426 (729)
199 3fpz_A Thiazole biosynthetic e 98.5 1.2E-07 4.1E-12 85.5 5.8 41 6-46 64-106 (326)
200 2gag_A Heterotetrameric sarcos 98.5 5.4E-07 1.8E-11 92.8 10.8 37 7-43 128-164 (965)
201 1v59_A Dihydrolipoamide dehydr 98.4 1.9E-06 6.4E-11 82.1 13.0 35 7-41 183-217 (478)
202 1ebd_A E3BD, dihydrolipoamide 98.4 2.1E-06 7.1E-11 81.2 13.0 54 157-214 215-271 (455)
203 1i8t_A UDP-galactopyranose mut 98.4 1.7E-07 5.9E-12 85.9 5.4 46 8-53 2-47 (367)
204 1nhp_A NADH peroxidase; oxidor 98.4 2.3E-06 7.8E-11 80.8 13.0 54 156-214 194-247 (447)
205 2gqw_A Ferredoxin reductase; f 98.4 3.1E-06 1.1E-10 78.7 13.7 59 157-224 191-250 (408)
206 1ojt_A Surface protein; redox- 98.4 1.9E-06 6.5E-11 82.1 11.5 53 158-214 231-287 (482)
207 1sez_A Protoporphyrinogen oxid 98.4 3.1E-07 1E-11 88.2 5.8 48 6-53 12-59 (504)
208 2bi7_A UDP-galactopyranose mut 98.4 3.9E-07 1.3E-11 84.0 6.2 43 7-49 3-45 (384)
209 2a8x_A Dihydrolipoyl dehydroge 98.4 5.1E-06 1.7E-10 78.8 13.9 53 158-214 217-272 (464)
210 1m6i_A Programmed cell death p 98.4 4.7E-06 1.6E-10 79.5 13.7 60 157-220 230-290 (493)
211 3oc4_A Oxidoreductase, pyridin 98.3 5.1E-06 1.8E-10 78.4 13.6 55 155-214 191-245 (452)
212 2cdu_A NADPH oxidase; flavoenz 98.3 6.8E-06 2.3E-10 77.6 13.9 54 156-214 194-248 (452)
213 2bc0_A NADH oxidase; flavoprot 98.3 6.4E-06 2.2E-10 78.6 13.2 53 157-214 240-292 (490)
214 1lvl_A Dihydrolipoamide dehydr 98.3 5.1E-06 1.7E-10 78.6 12.1 35 7-41 171-205 (458)
215 1dxl_A Dihydrolipoamide dehydr 98.3 5.3E-06 1.8E-10 78.8 12.0 54 157-214 222-280 (470)
216 1xhc_A NADH oxidase /nitrite r 98.3 4.8E-06 1.6E-10 76.3 11.1 54 158-220 188-242 (367)
217 4b63_A L-ornithine N5 monooxyg 98.3 6.7E-07 2.3E-11 85.5 5.2 57 153-211 145-212 (501)
218 3pl8_A Pyranose 2-oxidase; sub 98.2 1.3E-06 4.4E-11 85.5 5.3 40 5-44 44-83 (623)
219 3g5s_A Methylenetetrahydrofola 98.1 6.2E-06 2.1E-10 74.3 7.0 36 8-43 2-37 (443)
220 3s5w_A L-ornithine 5-monooxyge 98.1 2.2E-05 7.4E-10 74.4 11.2 35 7-41 227-263 (463)
221 2vdc_G Glutamate synthase [NAD 98.1 3.8E-06 1.3E-10 79.1 5.9 39 6-44 121-159 (456)
222 1trb_A Thioredoxin reductase; 98.0 4.5E-05 1.5E-09 68.3 12.6 33 8-40 146-178 (320)
223 3dgz_A Thioredoxin reductase 2 98.0 5.5E-05 1.9E-09 72.1 13.6 33 7-39 185-217 (488)
224 3kd9_A Coenzyme A disulfide re 98.0 2.9E-05 1E-09 73.2 11.6 34 8-41 149-182 (449)
225 2zbw_A Thioredoxin reductase; 98.0 4.5E-05 1.5E-09 68.8 12.0 33 8-40 153-185 (335)
226 3d1c_A Flavin-containing putat 98.0 5.4E-05 1.8E-09 69.3 11.7 56 156-215 217-274 (369)
227 2xag_A Lysine-specific histone 98.0 6.6E-06 2.2E-10 82.9 5.9 43 6-48 277-319 (852)
228 2z3y_A Lysine-specific histone 98.0 6.5E-06 2.2E-10 81.4 5.7 43 6-48 106-148 (662)
229 3ab1_A Ferredoxin--NADP reduct 97.9 5.3E-05 1.8E-09 69.1 10.9 33 8-40 164-196 (360)
230 3qfa_A Thioredoxin reductase 1 97.9 0.00014 4.7E-09 69.8 13.6 32 8-39 211-242 (519)
231 3l8k_A Dihydrolipoyl dehydroge 97.8 0.00016 5.3E-09 68.5 12.3 35 7-41 172-206 (466)
232 2x8g_A Thioredoxin glutathione 97.8 0.0003 1E-08 68.8 14.5 32 8-39 287-318 (598)
233 1vg0_A RAB proteins geranylger 97.8 2E-05 6.9E-10 76.3 6.0 66 141-211 369-435 (650)
234 3f8d_A Thioredoxin reductase ( 97.8 9.7E-05 3.3E-09 66.0 9.4 35 7-41 154-188 (323)
235 3itj_A Thioredoxin reductase 1 97.8 0.00015 5.1E-09 65.3 10.7 35 7-41 173-207 (338)
236 1lqt_A FPRA; NADP+ derivative, 97.7 2.3E-05 7.9E-10 73.8 4.7 38 7-44 3-47 (456)
237 1m6i_A Programmed cell death p 97.7 2.7E-05 9.4E-10 74.2 5.0 39 4-42 8-48 (493)
238 3ayj_A Pro-enzyme of L-phenyla 97.7 2.7E-05 9.3E-10 76.4 4.8 36 7-42 56-100 (721)
239 3uox_A Otemo; baeyer-villiger 97.7 0.00022 7.6E-09 68.7 10.9 35 7-41 185-219 (545)
240 3cty_A Thioredoxin reductase; 97.7 0.00016 5.4E-09 64.7 9.3 33 8-40 156-188 (319)
241 2q0l_A TRXR, thioredoxin reduc 97.6 0.00045 1.5E-08 61.4 11.9 34 7-40 143-176 (311)
242 2q7v_A Thioredoxin reductase; 97.6 0.0002 6.7E-09 64.2 9.6 33 8-40 153-185 (325)
243 3r9u_A Thioredoxin reductase; 97.6 0.00017 5.8E-09 64.2 9.0 33 8-40 148-180 (315)
244 1gte_A Dihydropyrimidine dehyd 97.6 4.8E-05 1.7E-09 78.9 5.7 38 7-44 187-225 (1025)
245 1cjc_A Protein (adrenodoxin re 97.6 5.1E-05 1.7E-09 71.5 5.4 38 6-43 5-44 (460)
246 3gwf_A Cyclohexanone monooxyge 97.6 0.0011 3.7E-08 63.8 14.2 35 7-41 178-212 (540)
247 1fl2_A Alkyl hydroperoxide red 97.6 0.00028 9.6E-09 62.7 9.3 33 8-40 145-177 (310)
248 4ap3_A Steroid monooxygenase; 97.5 0.00023 8E-09 68.6 8.6 35 7-41 191-225 (549)
249 3lzw_A Ferredoxin--NADP reduct 97.5 0.00057 1.9E-08 61.3 10.8 33 8-40 155-187 (332)
250 3fbs_A Oxidoreductase; structu 97.5 0.00029 9.8E-09 62.1 8.5 52 161-220 182-234 (297)
251 1vdc_A NTR, NADPH dependent th 97.5 0.00041 1.4E-08 62.3 9.1 34 7-40 159-192 (333)
252 2a87_A TRXR, TR, thioredoxin r 97.4 0.00035 1.2E-08 62.9 7.7 34 7-40 155-188 (335)
253 1cjc_A Protein (adrenodoxin re 97.3 0.0019 6.4E-08 60.8 12.1 35 7-41 145-200 (460)
254 1lqt_A FPRA; NADP+ derivative, 97.1 0.0016 5.5E-08 61.2 9.6 58 156-215 249-328 (456)
255 1hyu_A AHPF, alkyl hydroperoxi 97.1 0.0015 5E-08 62.7 8.8 33 8-40 356-388 (521)
256 2gag_A Heterotetrameric sarcos 97.0 0.0023 7.7E-08 66.1 9.6 33 8-40 285-317 (965)
257 2g1u_A Hypothetical protein TM 97.0 0.00092 3.2E-08 52.6 5.1 36 6-41 18-53 (155)
258 1w4x_A Phenylacetone monooxyge 96.9 0.014 4.7E-07 56.2 14.2 34 7-40 186-219 (542)
259 3llv_A Exopolyphosphatase-rela 96.8 0.0012 4.1E-08 51.0 4.8 33 8-40 7-39 (141)
260 2vdc_G Glutamate synthase [NAD 96.7 0.0034 1.2E-07 58.9 8.0 34 7-40 264-298 (456)
261 3h28_A Sulfide-quinone reducta 96.7 0.0052 1.8E-07 57.3 9.1 57 158-220 205-263 (430)
262 1gte_A Dihydropyrimidine dehyd 96.7 0.015 5.2E-07 60.4 13.1 33 8-40 333-366 (1025)
263 1lss_A TRK system potassium up 96.6 0.0017 5.8E-08 49.9 4.4 33 8-40 5-37 (140)
264 3sx6_A Sulfide-quinone reducta 96.6 0.0091 3.1E-07 55.8 10.1 52 158-215 213-271 (437)
265 3fwz_A Inner membrane protein 96.6 0.0028 9.7E-08 48.8 5.1 34 7-40 7-40 (140)
266 4a9w_A Monooxygenase; baeyer-v 96.5 0.0058 2E-07 55.1 7.8 33 7-40 163-195 (357)
267 3ic5_A Putative saccharopine d 96.4 0.003 1E-07 46.8 4.5 34 7-40 5-39 (118)
268 1id1_A Putative potassium chan 96.4 0.0044 1.5E-07 48.6 5.6 33 7-39 3-35 (153)
269 1vg0_A RAB proteins geranylger 96.4 0.38 1.3E-05 46.8 19.9 46 2-47 3-48 (650)
270 1y6j_A L-lactate dehydrogenase 96.3 0.004 1.4E-07 55.3 5.2 40 1-40 1-42 (318)
271 4b63_A L-ornithine N5 monooxyg 96.3 0.035 1.2E-06 52.8 11.8 33 8-40 247-281 (501)
272 3ado_A Lambda-crystallin; L-gu 96.2 0.0037 1.3E-07 55.2 4.5 34 7-40 6-39 (319)
273 4e12_A Diketoreductase; oxidor 96.2 0.0047 1.6E-07 54.0 5.0 33 8-40 5-37 (283)
274 4fk1_A Putative thioredoxin re 96.2 0.034 1.2E-06 48.9 10.5 54 163-220 190-244 (304)
275 3klj_A NAD(FAD)-dependent dehy 96.1 0.0054 1.8E-07 56.2 5.2 35 8-42 147-181 (385)
276 3g0o_A 3-hydroxyisobutyrate de 96.1 0.0051 1.8E-07 54.3 4.6 40 1-40 1-40 (303)
277 2dpo_A L-gulonate 3-dehydrogen 96.0 0.0052 1.8E-07 54.5 4.5 34 7-40 6-39 (319)
278 1pzg_A LDH, lactate dehydrogen 96.0 0.0078 2.7E-07 53.8 5.6 34 7-40 9-43 (331)
279 2hmt_A YUAA protein; RCK, KTN, 96.0 0.0067 2.3E-07 46.7 4.6 33 8-40 7-39 (144)
280 4gcm_A TRXR, thioredoxin reduc 96.0 0.005 1.7E-07 54.6 4.3 34 8-41 146-179 (312)
281 3i83_A 2-dehydropantoate 2-red 96.0 0.0066 2.2E-07 54.1 5.0 33 8-40 3-35 (320)
282 2ewd_A Lactate dehydrogenase,; 96.0 0.0076 2.6E-07 53.6 5.3 34 7-40 4-38 (317)
283 3l6d_A Putative oxidoreductase 95.9 0.0097 3.3E-07 52.6 5.8 36 5-40 7-42 (306)
284 1f0y_A HCDH, L-3-hydroxyacyl-C 95.9 0.0086 2.9E-07 52.9 5.4 33 8-40 16-48 (302)
285 3l4b_C TRKA K+ channel protien 95.9 0.0062 2.1E-07 50.9 4.0 32 9-40 2-33 (218)
286 3hn2_A 2-dehydropantoate 2-red 95.8 0.0071 2.4E-07 53.7 4.5 33 8-40 3-35 (312)
287 3c85_A Putative glutathione-re 95.8 0.0088 3E-07 48.4 4.6 34 7-40 39-73 (183)
288 1ges_A Glutathione reductase; 95.7 0.03 1E-06 52.5 8.5 36 7-42 167-202 (450)
289 3qha_A Putative oxidoreductase 95.7 0.0072 2.5E-07 53.2 3.9 35 7-41 15-49 (296)
290 3k96_A Glycerol-3-phosphate de 95.7 0.01 3.4E-07 53.6 4.9 34 7-40 29-62 (356)
291 2yqu_A 2-oxoglutarate dehydrog 95.7 0.01 3.6E-07 55.7 5.2 36 7-42 167-202 (455)
292 3ghy_A Ketopantoate reductase 95.6 0.013 4.3E-07 52.7 5.4 32 8-39 4-35 (335)
293 1bg6_A N-(1-D-carboxylethyl)-L 95.6 0.011 3.6E-07 53.7 4.9 33 7-39 4-36 (359)
294 3g17_A Similar to 2-dehydropan 95.6 0.0089 3E-07 52.5 4.3 33 8-40 3-35 (294)
295 1t2d_A LDH-P, L-lactate dehydr 95.6 0.014 4.8E-07 51.8 5.4 34 7-40 4-38 (322)
296 4a5l_A Thioredoxin reductase; 95.6 0.0097 3.3E-07 52.7 4.4 34 7-40 152-185 (314)
297 3gg2_A Sugar dehydrogenase, UD 95.6 0.01 3.5E-07 55.4 4.6 33 8-40 3-35 (450)
298 1lld_A L-lactate dehydrogenase 95.6 0.012 4.2E-07 52.3 5.0 34 7-40 7-42 (319)
299 2y0c_A BCEC, UDP-glucose dehyd 95.5 0.012 4E-07 55.5 4.9 34 7-40 8-41 (478)
300 3pid_A UDP-glucose 6-dehydroge 95.5 0.01 3.4E-07 54.8 4.3 34 6-40 35-68 (432)
301 2v3a_A Rubredoxin reductase; a 95.5 0.013 4.4E-07 53.7 5.1 36 7-42 145-180 (384)
302 3tl2_A Malate dehydrogenase; c 95.5 0.016 5.5E-07 51.2 5.4 34 6-39 7-41 (315)
303 3ktd_A Prephenate dehydrogenas 95.5 0.015 5.1E-07 52.0 5.2 40 1-40 2-41 (341)
304 3lk7_A UDP-N-acetylmuramoylala 95.5 0.013 4.3E-07 55.0 4.9 34 7-40 9-42 (451)
305 2raf_A Putative dinucleotide-b 95.4 0.016 5.5E-07 48.0 4.9 35 7-41 19-53 (209)
306 2ew2_A 2-dehydropantoate 2-red 95.4 0.014 4.7E-07 51.8 4.8 32 8-39 4-35 (316)
307 1ks9_A KPA reductase;, 2-dehyd 95.4 0.016 5.4E-07 50.7 5.0 32 9-40 2-33 (291)
308 4g65_A TRK system potassium up 95.3 0.0059 2E-07 57.3 2.2 35 6-40 2-36 (461)
309 1zej_A HBD-9, 3-hydroxyacyl-CO 95.3 0.014 4.8E-07 51.0 4.4 34 6-40 11-44 (293)
310 1zmd_A Dihydrolipoyl dehydroge 95.3 0.056 1.9E-06 51.0 8.8 36 7-42 178-213 (474)
311 3g79_A NDP-N-acetyl-D-galactos 95.3 0.013 4.4E-07 54.9 4.2 35 7-41 18-54 (478)
312 3k6j_A Protein F01G10.3, confi 95.2 0.019 6.4E-07 53.4 5.2 34 8-41 55-88 (460)
313 3dfz_A SIRC, precorrin-2 dehyd 95.2 0.02 6.9E-07 47.6 4.8 34 6-39 30-63 (223)
314 2hqm_A GR, grase, glutathione 95.2 0.056 1.9E-06 51.0 8.5 36 7-42 185-220 (479)
315 2r9z_A Glutathione amide reduc 95.2 0.019 6.5E-07 54.0 5.2 35 8-42 167-201 (463)
316 3mog_A Probable 3-hydroxybutyr 95.2 0.019 6.4E-07 54.1 5.0 34 7-40 5-38 (483)
317 2hjr_A Malate dehydrogenase; m 95.2 0.022 7.5E-07 50.8 5.2 34 7-40 14-48 (328)
318 3ego_A Probable 2-dehydropanto 95.1 0.019 6.5E-07 50.7 4.7 32 8-40 3-34 (307)
319 3doj_A AT3G25530, dehydrogenas 95.1 0.025 8.5E-07 50.1 5.4 34 7-40 21-54 (310)
320 4a7p_A UDP-glucose dehydrogena 95.1 0.021 7.2E-07 53.1 5.1 35 7-41 8-42 (446)
321 1onf_A GR, grase, glutathione 95.1 0.058 2E-06 51.3 8.3 36 7-42 176-211 (500)
322 4b1b_A TRXR, thioredoxin reduc 95.1 0.028 9.5E-07 53.8 6.0 35 7-41 223-257 (542)
323 4e21_A 6-phosphogluconate dehy 95.0 0.02 6.7E-07 51.7 4.6 35 6-40 21-55 (358)
324 1kyq_A Met8P, siroheme biosynt 95.0 0.014 4.6E-07 50.3 3.2 35 6-40 12-46 (274)
325 3pqe_A L-LDH, L-lactate dehydr 94.9 0.027 9.2E-07 50.0 5.1 34 6-39 4-39 (326)
326 3vtf_A UDP-glucose 6-dehydroge 94.9 0.023 8E-07 52.4 4.8 35 6-40 20-54 (444)
327 1z82_A Glycerol-3-phosphate de 94.9 0.025 8.6E-07 50.6 5.0 34 6-39 13-46 (335)
328 2v6b_A L-LDH, L-lactate dehydr 94.9 0.026 8.9E-07 49.7 4.8 32 9-40 2-35 (304)
329 2qyt_A 2-dehydropantoate 2-red 94.9 0.018 6.3E-07 51.0 4.0 31 8-38 9-45 (317)
330 3ic9_A Dihydrolipoamide dehydr 94.9 0.025 8.6E-07 53.7 5.1 36 7-42 174-209 (492)
331 3cgb_A Pyridine nucleotide-dis 94.8 0.02 7E-07 54.1 4.3 36 7-42 186-221 (480)
332 1zcj_A Peroxisomal bifunctiona 94.8 0.025 8.5E-07 53.1 4.9 33 8-40 38-70 (463)
333 3dtt_A NADP oxidoreductase; st 94.8 0.026 8.8E-07 48.0 4.5 34 7-40 19-52 (245)
334 4eqs_A Coenzyme A disulfide re 94.8 0.025 8.5E-07 52.8 4.7 35 8-42 148-182 (437)
335 3urh_A Dihydrolipoyl dehydroge 94.8 0.088 3E-06 49.9 8.6 36 7-42 198-233 (491)
336 3pef_A 6-phosphogluconate dehy 94.7 0.031 1E-06 48.9 5.0 34 8-41 2-35 (287)
337 1ldn_A L-lactate dehydrogenase 94.7 0.036 1.2E-06 49.1 5.4 35 6-40 5-41 (316)
338 3ef6_A Toluene 1,2-dioxygenase 94.7 0.032 1.1E-06 51.6 5.2 36 7-42 143-178 (410)
339 2uyy_A N-PAC protein; long-cha 94.7 0.044 1.5E-06 48.6 5.8 34 7-40 30-63 (316)
340 3d0o_A L-LDH 1, L-lactate dehy 94.6 0.033 1.1E-06 49.3 4.9 38 1-39 1-40 (317)
341 3d1l_A Putative NADP oxidoredu 94.6 0.031 1.1E-06 48.2 4.6 33 7-39 10-43 (266)
342 1ur5_A Malate dehydrogenase; o 94.6 0.036 1.2E-06 49.0 5.1 33 8-40 3-36 (309)
343 2q3e_A UDP-glucose 6-dehydroge 94.6 0.027 9.3E-07 52.9 4.5 33 8-40 6-40 (467)
344 3hwr_A 2-dehydropantoate 2-red 94.6 0.032 1.1E-06 49.5 4.8 32 7-39 19-50 (318)
345 2x5o_A UDP-N-acetylmuramoylala 94.6 0.022 7.5E-07 53.2 3.8 36 7-42 5-40 (439)
346 1mv8_A GMD, GDP-mannose 6-dehy 94.6 0.026 8.9E-07 52.6 4.3 32 9-40 2-33 (436)
347 3cky_A 2-hydroxymethyl glutara 94.5 0.027 9.4E-07 49.5 4.1 34 7-40 4-37 (301)
348 4huj_A Uncharacterized protein 94.5 0.023 8E-07 47.4 3.5 33 8-40 24-57 (220)
349 3dk9_A Grase, GR, glutathione 94.5 0.091 3.1E-06 49.6 8.0 36 7-42 187-222 (478)
350 3gvi_A Malate dehydrogenase; N 94.5 0.042 1.4E-06 48.7 5.2 34 7-40 7-41 (324)
351 3dfu_A Uncharacterized protein 94.5 0.013 4.4E-07 49.0 1.8 33 7-39 6-38 (232)
352 2wpf_A Trypanothione reductase 94.5 0.11 3.8E-06 49.2 8.5 35 8-42 192-229 (495)
353 2izz_A Pyrroline-5-carboxylate 94.5 0.04 1.4E-06 49.0 5.0 34 7-40 22-59 (322)
354 1guz_A Malate dehydrogenase; o 94.4 0.04 1.4E-06 48.7 5.0 32 9-40 2-35 (310)
355 3ntd_A FAD-dependent pyridine 94.4 0.097 3.3E-06 50.6 8.1 35 8-42 152-186 (565)
356 2vns_A Metalloreductase steap3 94.4 0.046 1.6E-06 45.4 5.0 34 7-40 28-61 (215)
357 1txg_A Glycerol-3-phosphate de 94.4 0.035 1.2E-06 49.7 4.6 30 9-38 2-31 (335)
358 4ezb_A Uncharacterized conserv 94.4 0.039 1.3E-06 48.9 4.7 34 7-40 24-58 (317)
359 3l9w_A Glutathione-regulated p 94.4 0.038 1.3E-06 50.9 4.8 34 7-40 4-37 (413)
360 3ggo_A Prephenate dehydrogenas 94.3 0.047 1.6E-06 48.3 5.1 33 8-40 34-68 (314)
361 4dll_A 2-hydroxy-3-oxopropiona 94.3 0.036 1.2E-06 49.3 4.4 34 7-40 31-64 (320)
362 2qae_A Lipoamide, dihydrolipoy 94.3 0.043 1.5E-06 51.7 5.2 36 7-42 174-209 (468)
363 1zk7_A HGII, reductase, mercur 94.3 0.042 1.4E-06 51.7 5.1 36 7-42 176-211 (467)
364 3pdu_A 3-hydroxyisobutyrate de 94.3 0.038 1.3E-06 48.3 4.4 32 9-40 3-34 (287)
365 3eag_A UDP-N-acetylmuramate:L- 94.3 0.043 1.5E-06 48.9 4.8 33 8-40 5-38 (326)
366 3p7m_A Malate dehydrogenase; p 94.2 0.055 1.9E-06 47.9 5.4 34 7-40 5-39 (321)
367 4dio_A NAD(P) transhydrogenase 94.2 0.051 1.7E-06 49.4 5.2 34 7-40 190-223 (405)
368 1jw9_B Molybdopterin biosynthe 94.2 0.045 1.6E-06 46.6 4.6 35 7-41 31-66 (249)
369 1a5z_A L-lactate dehydrogenase 94.2 0.043 1.5E-06 48.7 4.6 32 9-40 2-35 (319)
370 2a9f_A Putative malic enzyme ( 94.2 0.046 1.6E-06 49.2 4.7 35 6-40 187-222 (398)
371 2o3j_A UDP-glucose 6-dehydroge 94.1 0.04 1.4E-06 52.0 4.5 34 7-40 9-44 (481)
372 1fec_A Trypanothione reductase 94.1 0.1 3.4E-06 49.5 7.4 36 7-42 187-225 (490)
373 3qsg_A NAD-binding phosphogluc 94.1 0.041 1.4E-06 48.7 4.4 33 7-39 24-57 (312)
374 3p2y_A Alanine dehydrogenase/p 94.1 0.049 1.7E-06 49.1 4.9 34 7-40 184-217 (381)
375 2xve_A Flavin-containing monoo 94.1 0.042 1.4E-06 51.7 4.5 35 7-41 197-231 (464)
376 2rcy_A Pyrroline carboxylate r 94.0 0.058 2E-06 46.3 5.0 34 8-41 5-42 (262)
377 2h78_A Hibadh, 3-hydroxyisobut 94.0 0.046 1.6E-06 48.1 4.4 33 8-40 4-36 (302)
378 1dlj_A UDP-glucose dehydrogena 94.0 0.037 1.3E-06 50.9 3.9 31 9-40 2-32 (402)
379 3lad_A Dihydrolipoamide dehydr 94.0 0.16 5.5E-06 47.8 8.4 36 7-42 180-215 (476)
380 4gwg_A 6-phosphogluconate dehy 94.0 0.064 2.2E-06 50.3 5.5 34 7-40 4-37 (484)
381 1oju_A MDH, malate dehydrogena 94.0 0.045 1.5E-06 47.8 4.2 32 9-40 2-35 (294)
382 2i6t_A Ubiquitin-conjugating e 93.9 0.054 1.8E-06 47.6 4.7 34 7-40 14-49 (303)
383 3c24_A Putative oxidoreductase 93.9 0.069 2.4E-06 46.5 5.4 32 8-39 12-44 (286)
384 2p4q_A 6-phosphogluconate dehy 93.9 0.065 2.2E-06 50.6 5.5 35 6-40 9-43 (497)
385 1evy_A Glycerol-3-phosphate de 93.9 0.031 1.1E-06 50.7 3.3 31 9-39 17-47 (366)
386 1mo9_A ORF3; nucleotide bindin 93.9 0.17 5.9E-06 48.3 8.6 35 8-42 215-249 (523)
387 1vl6_A Malate oxidoreductase; 93.9 0.055 1.9E-06 48.7 4.7 34 6-39 191-225 (388)
388 2zyd_A 6-phosphogluconate dehy 93.9 0.054 1.8E-06 51.0 4.9 35 6-40 14-48 (480)
389 3lxd_A FAD-dependent pyridine 93.9 0.057 1.9E-06 49.9 5.0 36 7-42 152-187 (415)
390 3fg2_P Putative rubredoxin red 93.9 0.059 2E-06 49.6 5.1 35 8-42 143-177 (404)
391 3vps_A TUNA, NAD-dependent epi 93.9 0.062 2.1E-06 47.5 5.1 35 7-41 7-42 (321)
392 3tri_A Pyrroline-5-carboxylate 93.9 0.079 2.7E-06 46.0 5.6 33 8-40 4-39 (280)
393 1xdi_A RV3303C-LPDA; reductase 93.9 0.17 5.7E-06 48.1 8.3 36 7-42 182-217 (499)
394 1jay_A Coenzyme F420H2:NADP+ o 93.8 0.055 1.9E-06 44.7 4.4 31 9-39 2-33 (212)
395 3gpi_A NAD-dependent epimerase 93.8 0.073 2.5E-06 46.3 5.4 34 8-41 4-37 (286)
396 1ez4_A Lactate dehydrogenase; 93.8 0.061 2.1E-06 47.6 4.7 35 5-39 3-39 (318)
397 3gt0_A Pyrroline-5-carboxylate 93.7 0.072 2.5E-06 45.3 5.0 32 8-39 3-38 (247)
398 2gv8_A Monooxygenase; FMO, FAD 93.7 0.052 1.8E-06 50.8 4.4 34 7-40 212-246 (447)
399 1vpd_A Tartronate semialdehyde 93.7 0.054 1.8E-06 47.5 4.3 33 8-40 6-38 (299)
400 1hyh_A L-hicdh, L-2-hydroxyiso 93.7 0.059 2E-06 47.6 4.5 32 9-40 3-36 (309)
401 2aef_A Calcium-gated potassium 93.7 0.028 9.5E-07 47.4 2.3 35 6-41 8-42 (234)
402 2r6j_A Eugenol synthase 1; phe 93.7 0.067 2.3E-06 47.3 5.0 34 7-40 11-45 (318)
403 2f1k_A Prephenate dehydrogenas 93.6 0.07 2.4E-06 46.3 4.8 31 9-39 2-32 (279)
404 1yj8_A Glycerol-3-phosphate de 93.6 0.057 1.9E-06 49.2 4.4 34 8-41 22-62 (375)
405 3ius_A Uncharacterized conserv 93.6 0.058 2E-06 46.9 4.3 33 8-40 6-38 (286)
406 1yqg_A Pyrroline-5-carboxylate 93.6 0.066 2.3E-06 46.0 4.6 31 9-39 2-33 (263)
407 1x0v_A GPD-C, GPDH-C, glycerol 93.6 0.042 1.5E-06 49.6 3.5 34 8-41 9-49 (354)
408 2pv7_A T-protein [includes: ch 93.6 0.079 2.7E-06 46.5 5.1 33 8-40 22-55 (298)
409 3dhn_A NAD-dependent epimerase 93.5 0.059 2E-06 45.0 4.1 34 8-41 5-39 (227)
410 2wtb_A MFP2, fatty acid multif 93.5 0.07 2.4E-06 53.0 5.1 33 8-40 313-345 (725)
411 3oj0_A Glutr, glutamyl-tRNA re 93.5 0.026 8.8E-07 43.5 1.6 33 7-39 21-53 (144)
412 3nep_X Malate dehydrogenase; h 93.5 0.072 2.5E-06 46.9 4.7 32 9-40 2-35 (314)
413 3dgh_A TRXR-1, thioredoxin red 93.4 0.24 8.3E-06 46.7 8.6 32 8-39 188-219 (483)
414 2pgd_A 6-phosphogluconate dehy 93.4 0.085 2.9E-06 49.8 5.3 33 8-40 3-35 (482)
415 2gf2_A Hibadh, 3-hydroxyisobut 93.3 0.077 2.6E-06 46.4 4.7 32 9-40 2-33 (296)
416 3ojo_A CAP5O; rossmann fold, c 93.2 0.059 2E-06 49.7 3.8 33 8-40 12-44 (431)
417 4gbj_A 6-phosphogluconate dehy 93.2 0.065 2.2E-06 47.0 4.0 34 8-41 6-39 (297)
418 3h8v_A Ubiquitin-like modifier 93.2 0.078 2.7E-06 46.1 4.4 35 7-41 36-71 (292)
419 1pgj_A 6PGDH, 6-PGDH, 6-phosph 93.2 0.091 3.1E-06 49.5 5.1 33 8-40 2-34 (478)
420 3ew7_A LMO0794 protein; Q8Y8U8 93.1 0.098 3.4E-06 43.3 4.9 32 9-40 2-34 (221)
421 3c7a_A Octopine dehydrogenase; 93.1 0.05 1.7E-06 50.1 3.3 30 8-37 3-33 (404)
422 3vku_A L-LDH, L-lactate dehydr 93.1 0.099 3.4E-06 46.3 5.0 34 6-39 8-43 (326)
423 3ldh_A Lactate dehydrogenase; 93.1 0.1 3.5E-06 46.1 5.0 34 7-40 21-56 (330)
424 3rui_A Ubiquitin-like modifier 93.1 0.11 3.7E-06 46.1 5.1 36 7-42 34-70 (340)
425 4dna_A Probable glutathione re 93.0 0.24 8.3E-06 46.4 7.9 35 7-41 170-204 (463)
426 3ics_A Coenzyme A-disulfide re 93.0 0.095 3.3E-06 50.9 5.2 35 8-42 188-222 (588)
427 1wdk_A Fatty oxidation complex 92.9 0.069 2.4E-06 53.0 4.1 33 8-40 315-347 (715)
428 3phh_A Shikimate dehydrogenase 92.9 0.12 4.1E-06 44.3 5.1 34 7-40 118-151 (269)
429 1nyt_A Shikimate 5-dehydrogena 92.9 0.12 3.9E-06 44.7 5.1 33 7-39 119-151 (271)
430 3d3w_A L-xylulose reductase; u 92.9 0.14 4.9E-06 43.1 5.7 39 1-39 1-40 (244)
431 3h2s_A Putative NADH-flavin re 92.9 0.11 3.6E-06 43.3 4.7 32 9-40 2-34 (224)
432 2iz1_A 6-phosphogluconate dehy 92.9 0.12 4.1E-06 48.6 5.5 34 7-40 5-38 (474)
433 4ffl_A PYLC; amino acid, biosy 92.9 0.1 3.6E-06 47.2 5.0 33 9-41 3-35 (363)
434 4b4o_A Epimerase family protei 92.9 0.1 3.6E-06 45.6 4.8 32 9-40 2-34 (298)
435 3e8x_A Putative NAD-dependent 92.8 0.11 3.9E-06 43.6 4.8 34 7-40 21-55 (236)
436 3fi9_A Malate dehydrogenase; s 92.8 0.13 4.3E-06 46.0 5.3 33 7-39 8-43 (343)
437 1hdo_A Biliverdin IX beta redu 92.8 0.13 4.6E-06 41.9 5.1 34 8-41 4-38 (206)
438 4aj2_A L-lactate dehydrogenase 92.8 0.13 4.5E-06 45.6 5.3 34 6-39 18-53 (331)
439 1y7t_A Malate dehydrogenase; N 92.7 0.08 2.7E-06 47.1 3.9 33 7-39 4-44 (327)
440 2g5c_A Prephenate dehydrogenas 92.7 0.12 4E-06 44.9 4.9 32 9-40 3-36 (281)
441 1i36_A Conserved hypothetical 92.7 0.1 3.5E-06 44.8 4.4 30 9-38 2-31 (264)
442 1cyd_A Carbonyl reductase; sho 92.6 0.15 5.1E-06 43.0 5.4 39 1-39 1-40 (244)
443 1x13_A NAD(P) transhydrogenase 92.6 0.11 3.8E-06 47.6 4.7 34 7-40 172-205 (401)
444 3iwa_A FAD-dependent pyridine 92.5 0.11 3.9E-06 48.8 4.9 36 7-42 159-195 (472)
445 2ahr_A Putative pyrroline carb 92.5 0.1 3.4E-06 44.7 4.1 32 8-39 4-35 (259)
446 1zud_1 Adenylyltransferase THI 92.4 0.12 4E-06 44.1 4.4 35 7-41 28-63 (251)
447 1y1p_A ARII, aldehyde reductas 92.4 0.16 5.6E-06 45.2 5.6 34 6-39 10-44 (342)
448 2cvz_A Dehydrogenase, 3-hydrox 92.4 0.11 3.7E-06 45.3 4.2 31 9-40 3-33 (289)
449 3zwc_A Peroxisomal bifunctiona 92.3 0.092 3.2E-06 52.0 4.1 33 8-40 317-349 (742)
450 1np3_A Ketol-acid reductoisome 92.3 0.16 5.4E-06 45.4 5.3 32 8-39 17-48 (338)
451 2x0j_A Malate dehydrogenase; o 92.3 0.12 4.1E-06 45.0 4.4 32 9-40 2-35 (294)
452 1yb4_A Tartronic semialdehyde 92.3 0.083 2.8E-06 46.2 3.4 32 8-40 4-35 (295)
453 1pjq_A CYSG, siroheme synthase 92.2 0.12 4.1E-06 48.3 4.5 33 7-39 12-44 (457)
454 3k5i_A Phosphoribosyl-aminoimi 92.2 0.14 4.7E-06 47.1 4.8 34 4-37 21-54 (403)
455 3oig_A Enoyl-[acyl-carrier-pro 92.1 0.19 6.5E-06 43.1 5.5 40 1-40 1-43 (266)
456 1b8p_A Protein (malate dehydro 92.1 0.11 3.6E-06 46.4 3.9 33 7-39 5-45 (329)
457 2zqz_A L-LDH, L-lactate dehydr 92.1 0.16 5.5E-06 45.1 5.0 35 5-39 7-43 (326)
458 1pjc_A Protein (L-alanine dehy 92.1 0.14 4.7E-06 46.3 4.6 33 8-40 168-200 (361)
459 3o0h_A Glutathione reductase; 92.1 0.15 5.2E-06 48.1 5.2 36 7-42 191-226 (484)
460 1l7d_A Nicotinamide nucleotide 92.1 0.17 5.8E-06 46.2 5.2 34 7-40 172-205 (384)
461 1p77_A Shikimate 5-dehydrogena 91.9 0.12 4.2E-06 44.6 3.9 34 7-40 119-152 (272)
462 2d4a_B Malate dehydrogenase; a 91.9 0.17 5.7E-06 44.6 4.8 32 9-40 1-33 (308)
463 2egg_A AROE, shikimate 5-dehyd 91.9 0.16 5.5E-06 44.4 4.8 34 7-40 141-175 (297)
464 3enk_A UDP-glucose 4-epimerase 91.9 0.2 6.8E-06 44.7 5.5 35 6-40 4-39 (341)
465 2gdz_A NAD+-dependent 15-hydro 91.9 0.21 7.3E-06 42.8 5.5 40 1-40 1-41 (267)
466 2eez_A Alanine dehydrogenase; 91.9 0.17 5.8E-06 45.9 5.0 34 7-40 166-199 (369)
467 2hk9_A Shikimate dehydrogenase 91.8 0.16 5.4E-06 43.9 4.6 33 8-40 130-162 (275)
468 1mld_A Malate dehydrogenase; o 91.8 0.13 4.3E-06 45.5 4.0 32 9-40 2-36 (314)
469 3b1f_A Putative prephenate deh 91.8 0.16 5.4E-06 44.3 4.6 32 8-39 7-40 (290)
470 4g6h_A Rotenone-insensitive NA 91.7 0.44 1.5E-05 45.2 7.9 34 9-42 219-266 (502)
471 3orq_A N5-carboxyaminoimidazol 91.6 0.24 8.2E-06 45.0 5.8 36 6-41 11-46 (377)
472 3sxp_A ADP-L-glycero-D-mannohe 91.4 0.25 8.5E-06 44.5 5.7 34 7-40 10-46 (362)
473 4e4t_A Phosphoribosylaminoimid 91.3 0.27 9.3E-06 45.4 5.8 35 6-40 34-68 (419)
474 3u62_A Shikimate dehydrogenase 91.3 0.23 7.8E-06 42.3 4.9 32 9-40 110-142 (253)
475 3h5n_A MCCB protein; ubiquitin 91.3 0.19 6.3E-06 45.2 4.6 35 7-41 118-153 (353)
476 3don_A Shikimate dehydrogenase 91.3 0.18 6.1E-06 43.5 4.2 35 7-41 117-152 (277)
477 1smk_A Malate dehydrogenase, g 91.2 0.14 4.8E-06 45.5 3.7 35 6-40 7-44 (326)
478 2yjz_A Metalloreductase steap4 90.6 0.038 1.3E-06 45.3 0.0 34 7-40 19-52 (201)
479 2vhw_A Alanine dehydrogenase; 91.2 0.22 7.6E-06 45.2 5.0 33 7-39 168-200 (377)
480 4gsl_A Ubiquitin-like modifier 91.1 0.23 7.8E-06 47.5 5.1 36 7-42 326-362 (615)
481 4id9_A Short-chain dehydrogena 91.1 0.23 7.8E-06 44.4 5.0 36 6-41 18-54 (347)
482 3r6d_A NAD-dependent epimerase 91.1 0.3 1E-05 40.4 5.4 32 9-40 7-40 (221)
483 1dhr_A Dihydropteridine reduct 91.1 0.23 7.9E-06 41.9 4.8 41 1-41 1-42 (241)
484 1edz_A 5,10-methylenetetrahydr 91.0 0.2 6.7E-06 44.0 4.2 33 7-39 177-210 (320)
485 1qyc_A Phenylcoumaran benzylic 90.9 0.25 8.5E-06 43.3 5.0 33 8-40 5-38 (308)
486 3q2o_A Phosphoribosylaminoimid 90.9 0.31 1.1E-05 44.5 5.8 34 7-40 14-47 (389)
487 1o94_A Tmadh, trimethylamine d 90.9 0.16 5.4E-06 50.7 4.0 33 8-40 529-563 (729)
488 3ai3_A NADPH-sorbose reductase 90.9 0.34 1.2E-05 41.4 5.7 39 1-39 1-40 (263)
489 4gx0_A TRKA domain protein; me 90.8 0.23 7.8E-06 47.9 5.0 35 8-42 349-383 (565)
490 2d5c_A AROE, shikimate 5-dehyd 90.8 0.27 9.3E-06 42.1 5.0 31 9-39 118-148 (263)
491 2rir_A Dipicolinate synthase, 90.8 0.26 8.9E-06 43.2 5.0 34 7-40 157-190 (300)
492 3vh1_A Ubiquitin-like modifier 90.8 0.23 7.9E-06 47.4 4.8 35 7-41 327-362 (598)
493 1qyd_A Pinoresinol-lariciresin 90.7 0.26 8.9E-06 43.3 5.0 33 8-40 5-38 (313)
494 3d4o_A Dipicolinate synthase s 90.6 0.28 9.6E-06 42.8 5.0 34 7-40 155-188 (293)
495 3jyo_A Quinate/shikimate dehyd 90.5 0.31 1.1E-05 42.2 5.1 33 7-39 127-160 (283)
496 3hyw_A Sulfide-quinone reducta 90.4 0.045 1.5E-06 50.9 -0.4 43 163-212 66-108 (430)
497 3tnl_A Shikimate dehydrogenase 90.4 0.31 1E-05 42.9 5.0 33 7-39 154-187 (315)
498 3pwz_A Shikimate dehydrogenase 90.4 0.33 1.1E-05 41.7 5.1 34 7-40 120-154 (272)
499 2b69_A UDP-glucuronate decarbo 90.4 0.29 9.8E-06 43.7 5.0 34 7-40 27-61 (343)
500 1leh_A Leucine dehydrogenase; 90.4 0.31 1.1E-05 43.8 5.1 33 7-39 173-205 (364)
No 1
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=100.00 E-value=6.8e-46 Score=347.49 Aligned_cols=372 Identities=33% Similarity=0.554 Sum_probs=288.6
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCCCCcceecccCC-ccccchHHHHHHHHHHHHHhcCCe
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESRTIRATYPE-DYYHPMVLESSLLWEQAQSEIGYK 85 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~~~~~~s~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 85 (413)
++||+|||||++|+++|++|+++|++|+|||+...++..+++..+.+.++..+.. ..+.++...+.+.|+++.+..+.+
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~ 82 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDPPHTNGSHHGDTRIIRHAYGEGREYVPLALRSQELWYELEKETHHK 82 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSSCSSSSSCSSEEEECSSCTTCGGGHHHHHHHHHHHHHHHHHCSSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCcchhhhhhhcCCchHHHHHHHHHHHHHHHHHHhCCc
Confidence 5899999999999999999999999999999988775446666666666655433 256677888899999998887776
Q ss_pred eEeeeeeeeeCCC-ChHHHHHHHHHHHhCCCCccccCHHHHHHhcCCcccCCCCeEEEEecCCeeecHHHHHHHHHHHHH
Q 015072 86 VYFKAHQFDMGPS-ENKSLRSVIASCRKNSVPHQVLDCRQVLQKYSGRIEIPENWVGVTTELGGVIKPTKAVSMFQTLAI 164 (413)
Q Consensus 86 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 164 (413)
.+...+.+.+... +...+....+.+...+++.+.++.+++.+.+|. +.......+++.+.+++++|.++++.|.+.++
T Consensus 83 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 161 (389)
T 2gf3_A 83 IFTKTGVLVFGPKGESAFVAETMEAAKEHSLTVDLLEGDEINKRWPG-ITVPENYNAIFEPNSGVLFSENCIRAYRELAE 161 (389)
T ss_dssp CEECCCEEEEEETTCCHHHHHHHHHHHHTTCCCEEEETHHHHHHSTT-CCCCTTEEEEEETTCEEEEHHHHHHHHHHHHH
T ss_pred ceeecceEEEcCCCchHHHHHHHHHHHHcCCCcEEcCHHHHHHhCCC-cccCCCceEEEeCCCcEEeHHHHHHHHHHHHH
Confidence 6666666655433 444456666677778888889999999888887 65566778899999999999999999999999
Q ss_pred HcCCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcChhhhhhhhcCCCcceeEEEEEEEEEEecCCCc
Q 015072 165 KNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWVGKLVKKISGLELPIQAVETSVCYWRIKEGDE 244 (413)
Q Consensus 165 ~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~~~l~~~~~g~~~p~~~~~~~~~~~~~~~~~~ 244 (413)
+.|++++++++|++|.. + ++.+.+++++| +++||.||+|+|.|+..+++.+ +..+|+.|.+++++.++....
T Consensus 162 ~~Gv~i~~~~~v~~i~~--~--~~~~~v~~~~g-~~~a~~vV~A~G~~~~~l~~~~-g~~~pl~~~rg~~~~~~~~~~-- 233 (389)
T 2gf3_A 162 ARGAKVLTHTRVEDFDI--S--PDSVKIETANG-SYTADKLIVSMGAWNSKLLSKL-NLDIPLQPYRQVVGFFESDES-- 233 (389)
T ss_dssp HTTCEEECSCCEEEEEE--C--SSCEEEEETTE-EEEEEEEEECCGGGHHHHGGGG-TEECCCEEEEEEEEEECCCHH--
T ss_pred HCCCEEEcCcEEEEEEe--c--CCeEEEEeCCC-EEEeCEEEEecCccHHHHhhhh-ccCCceEEEEEEEEEEecCcc--
Confidence 99999999999999998 6 34577888777 4999999999999999888876 767899999999998864320
Q ss_pred cccccCCCCceEEec-CCCeeEecCCCCCCCeEEEEe-CCCCcCCCCCCCCCC---CcchHHHHHHHHhhcCCCCCCCCC
Q 015072 245 ADYAVGGDFPSFASY-GDPHVYGTPSLEYPGLIKIAL-HRGYLCDPDRRPWGP---GPLLDSLKELIQGRFAGRVDSSGP 319 (413)
Q Consensus 245 ~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~g~~~~~~-~~~~~~~~~~~~~~~---~~~~~~l~~~~~~~~p~~~~~~~~ 319 (413)
.+.....+|.+... .+..+|++|..+.. .+.++. ..+...+++..+... .+..+.+.+.+.+++|.+.+ .+
T Consensus 234 -~~~~~~~~p~~~~~~~~~~~y~~p~~~g~-~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~P~l~~--~~ 309 (389)
T 2gf3_A 234 -KYSNDIDFPGFMVEVPNGIYYGFPSFGGC-GLKLGYHTFGQKIDPDTINREFGVYPEDESNLRAFLEEYMPGANG--EL 309 (389)
T ss_dssp -HHBGGGTCCEEEEEETTEEEEEECBSTTC-CEEEEESSCCEECCTTTCCCCTTSSHHHHHHHHHHHHHHCGGGCS--CE
T ss_pred -cccccccCCEEEEeCCCCcEEEcCCCCCC-cEEEEEcCCCCccCcccccCccCCCHHHHHHHHHHHHHhCCCCCC--Cc
Confidence 11000124554432 22368888876522 344443 222222333222222 22678999999999999874 46
Q ss_pred ceeeeeeeeccCCCCeEEecCCCCCCCCEEEEeCCCccccccchHHHHHHHHHHHcCCCCccccccccccccCCC
Q 015072 320 AATQLCMYSMTPDKDFVIDFLGGELGEDVVVAGGFSGHGFKMAPVVGRILADLVLSGEAQGVELRHFRIARFKEN 394 (413)
Q Consensus 320 ~~~~~g~~~~t~d~~p~ig~~~~~~~~~~~~~~G~~~~G~~~a~~~a~~~a~~i~~~~~~~~~~~~~~~~R~~~~ 394 (413)
...|+|+|++|+|+.|+||++|.. +|+|+++||+|+|+++||++|+++|++|+++.+ +.+++.|+|+||...
T Consensus 310 ~~~w~g~r~~t~D~~p~ig~~~~~--~~l~~a~G~~g~G~~~ap~~g~~la~~i~~~~~-~~~~~~~~~~Rf~~~ 381 (389)
T 2gf3_A 310 KRGAVCMYTKTLDEHFIIDLHPEH--SNVVIAAGFSGHGFKFSSGVGEVLSQLALTGKT-EHDISIFSINRPALK 381 (389)
T ss_dssp EEEEEEEEEECTTSCCEEEEETTE--EEEEEEECCTTCCGGGHHHHHHHHHHHHHHSCC-SSCCGGGCTTCGGGT
T ss_pred eEEEEEEeccCCCCCeEEccCCCC--CCEEEEECCccccccccHHHHHHHHHHHcCCCC-CCCcccccccccccc
Confidence 788999999999999999999877 899999999999999999999999999995544 667899999999754
No 2
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=100.00 E-value=9.9e-46 Score=345.45 Aligned_cols=363 Identities=17% Similarity=0.193 Sum_probs=279.2
Q ss_pred CCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCCCCcceecccCCccccchHHHHHHHHHHHHHhcCC-
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESRTIRATYPEDYYHPMVLESSLLWEQAQSEIGY- 84 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 84 (413)
+++||+|||||++|+++|++|+ +|++|+|+|+.+..+ .+++..+.|.++..+....+.++...+.+.|.++.+.++.
T Consensus 8 ~~~dv~IIGaGi~Gls~A~~La-~G~~V~vlE~~~~~g-~~as~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 85 (381)
T 3nyc_A 8 IEADYLVIGAGIAGASTGYWLS-AHGRVVVLEREAQPG-YHSTGRSAAHYTVAYGTPQVRALTAASRAFFDNPPAGFCEH 85 (381)
T ss_dssp EECSEEEECCSHHHHHHHHHHT-TTSCEEEECSSSSTT-SSGGGSCCCEECSSSSCHHHHHHHHHHHHHHHSCCTTSCSS
T ss_pred CcCCEEEECCcHHHHHHHHHHh-CCCCEEEEECCCCcc-ccccccccceeecccCCHHHHHHHHHHHHHHHHhhhhhCCc
Confidence 4689999999999999999999 699999999986553 3566667778877777666677777888888877655432
Q ss_pred eeEeeeeeeeeCCC-ChHHHHHHHHHHHhCCCCccccCHHHHHHhcCCcccCCCCeEEEEecCCeeecHHHHHHHHHHHH
Q 015072 85 KVYFKAHQFDMGPS-ENKSLRSVIASCRKNSVPHQVLDCRQVLQKYSGRIEIPENWVGVTTELGGVIKPTKAVSMFQTLA 163 (413)
Q Consensus 85 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 163 (413)
..+...+.+..... ....+....+.++..+++.+.++.+++.+.+|. +.......+++.+.++.++|..+++.|.+.+
T Consensus 86 ~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~-l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a 164 (381)
T 3nyc_A 86 PLLSPRPEMVVDFSDDPEELRRQYESGKALVPQMRLLDAEQACSIVPV-LRRDKVFGATYDPTGADIDTDALHQGYLRGI 164 (381)
T ss_dssp CSEEECCEEEECSSCCHHHHHHHHHHHHHHCTTCEEECHHHHHHHSTT-BCGGGCCCEEEETTCEEECHHHHHHHHHHHH
T ss_pred ccccccceEEEechHHHHHHHHHHHHHHHcCCCcEEeCHHHHHHhCCC-cccccceEEEEcCCCceECHHHHHHHHHHHH
Confidence 23556666665443 344556666777778888999999999999987 5544456789999999999999999999999
Q ss_pred HHcCCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcChhhhhhhhcCCC-cceeEEEEEEEEEEecCC
Q 015072 164 IKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWVGKLVKKISGLE-LPIQAVETSVCYWRIKEG 242 (413)
Q Consensus 164 ~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~~~l~~~~~g~~-~p~~~~~~~~~~~~~~~~ 242 (413)
++.|++++++++|++|.. + ++.+.|++.+| +++||+||+|+|+|+..+.+.+ +.. +|+.|.+++++.++.++.
T Consensus 165 ~~~Gv~i~~~~~V~~i~~--~--~~~~~V~t~~g-~i~a~~VV~A~G~~s~~l~~~~-g~~~~~~~p~rg~~~~~~~~~~ 238 (381)
T 3nyc_A 165 RRNQGQVLCNHEALEIRR--V--DGAWEVRCDAG-SYRAAVLVNAAGAWCDAIAGLA-GVRPLGLQPKRRSAFIFAPPPG 238 (381)
T ss_dssp HHTTCEEESSCCCCEEEE--E--TTEEEEECSSE-EEEESEEEECCGGGHHHHHHHH-TCCCCCCEEEEEEEEEECCCTT
T ss_pred HHCCCEEEcCCEEEEEEE--e--CCeEEEEeCCC-EEEcCEEEECCChhHHHHHHHh-CCCCCceeeeEEEEEEECCCcC
Confidence 999999999999999998 7 34588988888 5999999999999999998887 765 799999999988764432
Q ss_pred CccccccCCCCceEEecCCCeeEecCCCCCCCeEEEEeCCCCcCCCCCCCCCCC-cchHHHHHHHHhhcCCCCCCCCCce
Q 015072 243 DEADYAVGGDFPSFASYGDPHVYGTPSLEYPGLIKIALHRGYLCDPDRRPWGPG-PLLDSLKELIQGRFAGRVDSSGPAA 321 (413)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~p~~~~~~~~~~ 321 (413)
.. . ..+|.+...+ ..+|++|.. |.+.++.......++. +..++ ..++.+.+.+.+ +|.+.+. .+..
T Consensus 239 ~~----~-~~~p~~~~~~-~~~y~~p~~---g~~~ig~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~l~~~-~~~~ 305 (381)
T 3nyc_A 239 ID----C-HDWPMLVSLD-ESFYLKPDA---GMLLGSPANADPVEAH--DVQPEQLDIATGMYLIEE-ATTLTIR-RPEH 305 (381)
T ss_dssp CC----C-TTCCEEEETT-SSCEEEEET---TEEEEECCCCEECCSS--CCCCCHHHHHHHHHHHHH-HBSCCCC-CCSE
T ss_pred CC----c-CccceEEeCC-CCEEEEeCC---CcEEEeCCcCCCCCcc--cCCCChHHHHHHHHHHHh-cCCCccc-ceee
Confidence 11 1 2256555443 457888874 4444444322211111 11111 145677777765 5666653 5778
Q ss_pred eeeeeeeccCCCCeEEecCCCCCCCCEEEEeCCCccccccchHHHHHHHHHHHcCCCCc------cccccccccccC
Q 015072 322 TQLCMYSMTPDKDFVIDFLGGELGEDVVVAGGFSGHGFKMAPVVGRILADLVLSGEAQG------VELRHFRIARFK 392 (413)
Q Consensus 322 ~~~g~~~~t~d~~p~ig~~~~~~~~~~~~~~G~~~~G~~~a~~~a~~~a~~i~~~~~~~------~~~~~~~~~R~~ 392 (413)
.|+|+||+|+|+.|+||++|.. +|+|+++||+|+|+++||++|+++|++|+++.++. .+++.|+|+||.
T Consensus 306 ~w~G~r~~t~D~~p~ig~~~~~--~~l~~a~G~~g~G~~~ap~~g~~la~~i~g~~~~~~~~~~~~d~~~~~~~Rf~ 380 (381)
T 3nyc_A 306 TWAGLRSFVADGDLVAGYAANA--EGFFWVAAQGGYGIQTSAAMGEASAALIRHQPLPAHLREHGLDEAMLSPRRLS 380 (381)
T ss_dssp EEEEEEEECTTSCCEEEECTTS--TTEEEEECCTTCTTTTHHHHHHHHHHHHTTCCCCHHHHTTTCCHHHHCGGGGC
T ss_pred eeEEccccCCCCCceecCCCCC--CCeEEEEcCCChhHhhCHHHHHHHHHHHhCCCCCcccccccCcccccCccccC
Confidence 9999999999999999999987 99999999999999999999999999999555532 578999999995
No 3
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=100.00 E-value=5.2e-45 Score=340.56 Aligned_cols=372 Identities=23% Similarity=0.300 Sum_probs=284.2
Q ss_pred CCCCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCCCCcceecccCCccccchHHHHHHHHHHHHHhcC
Q 015072 4 SGENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESRTIRATYPEDYYHPMVLESSLLWEQAQSEIG 83 (413)
Q Consensus 4 ~~~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (413)
|..++||+|||||++|+++|++|+++|++|+|||+...+ .++|..+.+.++..+......++...+.+.|+++.+..+
T Consensus 2 m~~~~dVvIIGgGi~Gl~~A~~La~~G~~V~lle~~~~~--~gas~~~~g~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~ 79 (382)
T 1y56_B 2 LPEKSEIVVIGGGIVGVTIAHELAKRGEEVTVIEKRFIG--SGSTFRCGTGIRQQFNDEANVRVMKRSVELWKKYSEEYG 79 (382)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTT--CSHHHHCCCCCCCCCSSHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCC--CCccccccCeeeecCCChHHHHHHHHHHHHHHHHHHHhC
Confidence 445799999999999999999999999999999998654 355666667777666655556777888889999888776
Q ss_pred CeeEeeeeeeeeCCC--ChHHHHHHHHHHHhCCCCccccCHHHHHHhcCCcccCCCCeEEEEecCCeeecHHHHHHHHHH
Q 015072 84 YKVYFKAHQFDMGPS--ENKSLRSVIASCRKNSVPHQVLDCRQVLQKYSGRIEIPENWVGVTTELGGVIKPTKAVSMFQT 161 (413)
Q Consensus 84 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 161 (413)
. .+...+.+..... ..+.+....+.+...+.+.+.++.+++.+.+|. +.......+++.+.++.++|..+++.|.+
T Consensus 80 ~-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 157 (382)
T 1y56_B 80 F-SFKQTGYLFLLYDDEEVKTFKRNIEIQNKFGVPTKLITPEEAKEIVPL-LDISEVIAASWNPTDGKADPFEATTAFAV 157 (382)
T ss_dssp C-CEECCCEEEEECSHHHHHHHHHHHHHHHHTTCCCEEECHHHHHHSSTT-CCCTTCCEEEEETTCCEECHHHHHHHHHH
T ss_pred C-CeeccceEEEEeCHHHHHHHHHHHHHHHhcCCCcEEeCHHHHHHhCCC-CCcccceEEEEcCCCeeECHHHHHHHHHH
Confidence 6 3445555554332 223445556667778888899999999888887 54455667889999999999999999999
Q ss_pred HHHHcCCeEecCceEEEEEeeeccCCCcEE-EEeCCccEEEeCeEEEcCCcChhhhhhhhcCCC--cceeEEEEEEEEEE
Q 015072 162 LAIKNGAVLRDNTEVKTVLKVKDDVRGGVT-VVTSSGEEFWGKKCVVTAGAWVGKLVKKISGLE--LPIQAVETSVCYWR 238 (413)
Q Consensus 162 ~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~-v~~~~g~~i~ad~vV~A~G~~~~~l~~~~~g~~--~p~~~~~~~~~~~~ 238 (413)
.+++.|++++++++|++|.. + ++.+. |++.+| +++||.||+|+|.|+..+.+.+ +.. +|+.+.+++++.++
T Consensus 158 ~~~~~Gv~i~~~~~v~~i~~--~--~~~v~gv~~~~g-~i~a~~VV~A~G~~s~~l~~~~-g~~~~~~~~~~~g~~~~~~ 231 (382)
T 1y56_B 158 KAKEYGAKLLEYTEVKGFLI--E--NNEIKGVKTNKG-IIKTGIVVNATNAWANLINAMA-GIKTKIPIEPYKHQAVITQ 231 (382)
T ss_dssp HHHHTTCEEECSCCEEEEEE--S--SSBEEEEEETTE-EEECSEEEECCGGGHHHHHHHH-TCCSCCCCEEEEEEEEEEC
T ss_pred HHHHCCCEEECCceEEEEEE--E--CCEEEEEEECCc-EEECCEEEECcchhHHHHHHHc-CCCcCcCCCeeEeEEEEEc
Confidence 99999999999999999998 6 34555 888888 5999999999999998887776 777 89999999988775
Q ss_pred ecCCCccccccCCCCceEEecCCCeeEecCCCCCCCeEEEEeCCCCcCCCCCCCCCCCcchHHHHHHHHhhcCCCCCCCC
Q 015072 239 IKEGDEADYAVGGDFPSFASYGDPHVYGTPSLEYPGLIKIALHRGYLCDPDRRPWGPGPLLDSLKELIQGRFAGRVDSSG 318 (413)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~ 318 (413)
.... .. ..+.+.......+|++|..+ |++.++...... .........+..+.+.+.+.+++|.+.+. .
T Consensus 232 ~~~~----~~---~~~~~~~~~~~~~y~~p~~~--g~~iG~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~p~l~~~-~ 299 (382)
T 1y56_B 232 PIKR----GT---INPMVISFKYGHAYLTQTFH--GGIIGGIGYEIG--PTYDLTPTYEFLREVSYYFTKIIPALKNL-L 299 (382)
T ss_dssp CCST----TS---SCSEEEESTTTTEEEECCSS--SCCEEECSCCBS--SCCCCCCCHHHHHHHHHHHHHHCGGGGGS-E
T ss_pred cCCc----cc---CCCeEEecCCCeEEEEEeCC--eEEEecCCCCCC--CCCCCCCCHHHHHHHHHHHHHhCCCcCCC-C
Confidence 2221 10 12444433324689999765 544442211110 01011111226788899999999998763 5
Q ss_pred CceeeeeeeeccCCCCeEEecCCCCCCCCEEEEeCCCccccccchHHHHHHHHHHHcCCCCccccccccccccCCCCCCC
Q 015072 319 PAATQLCMYSMTPDKDFVIDFLGGELGEDVVVAGGFSGHGFKMAPVVGRILADLVLSGEAQGVELRHFRIARFKENPKGN 398 (413)
Q Consensus 319 ~~~~~~g~~~~t~d~~p~ig~~~~~~~~~~~~~~G~~~~G~~~a~~~a~~~a~~i~~~~~~~~~~~~~~~~R~~~~~~~~ 398 (413)
+...|+|+||+|+|+.|+||++|.. +|+|+++||+|+|+++||++|+++|++|+++.+ ..+++.|+|+||...++.+
T Consensus 300 ~~~~~~g~r~~t~d~~p~ig~~~~~--~~~~~~~G~~g~G~~~a~~~g~~la~~i~~~~~-~~~~~~~~~~Rf~~~~~~~ 376 (382)
T 1y56_B 300 ILRTWAGYYAKTPDSNPAIGRIEEL--NDYYIAAGFSGHGFMMAPAVGEMVAELITKGKT-KLPVEWYDPYRFERGELRT 376 (382)
T ss_dssp EEEEEEEEEEECTTSCCEEEEESSS--BTEEEEECCTTCHHHHHHHHHHHHHHHHHHSSC-SSCGGGGCGGGTTTTCCC-
T ss_pred ceEEEEeccccCCCCCcEeccCCCC--CCEEEEEecCcchHhhhHHHHHHHHHHHhCCCC-cCcccccCHhhhccCCCCC
Confidence 6778999999999999999999977 999999999999999999999999999995544 5688999999998877655
Q ss_pred cc
Q 015072 399 VK 400 (413)
Q Consensus 399 ~~ 400 (413)
++
T Consensus 377 ~~ 378 (382)
T 1y56_B 377 AA 378 (382)
T ss_dssp --
T ss_pred cc
Confidence 44
No 4
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=100.00 E-value=3.6e-44 Score=336.49 Aligned_cols=368 Identities=23% Similarity=0.411 Sum_probs=280.9
Q ss_pred CCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCCCCcceecccCCccccchHHHHHHHHHHHHHhcCCe
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESRTIRATYPEDYYHPMVLESSLLWEQAQSEIGYK 85 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (413)
.++||+|||||++|+++|++|+++|++|+|||+....+..+++..+.+.++..+....+.++...+...|.++.+..+.+
T Consensus 3 ~~~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~~~~~~gas~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 82 (397)
T 2oln_A 3 ESYDVVVVGGGPVGLATAWQVAERGHRVLVLERHTFFNENGGTSGAERHWRLQYTQEDLFRLTLETLPLWRALESRCERR 82 (397)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTCSSSSCCSSEEEECSCCSSHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCCCCCCCCcCeEEEeccCcchhhhHHHHHHHHHHHHHHHhCcc
Confidence 35899999999999999999999999999999988765345666566666555554445566777888899888877766
Q ss_pred eEeeeeeeeeCCCCh----HHHHHHHHHHHhCCCCccccCHHHHHHhcCCcccCCCCeEEEEecCCeeecHHHHHHHHHH
Q 015072 86 VYFKAHQFDMGPSEN----KSLRSVIASCRKNSVPHQVLDCRQVLQKYSGRIEIPENWVGVTTELGGVIKPTKAVSMFQT 161 (413)
Q Consensus 86 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 161 (413)
++...+.+.....+. +.+....+.+...+++.+.++..++.+.+|. +.......+++.+.++.++|..+++.|.+
T Consensus 83 ~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~-~~~~~~~~~~~~~~~g~~~~~~~~~~l~~ 161 (397)
T 2oln_A 83 LIHEIGSLWFGDTDVVTNEGQISGTAAMMDKLSVRYEWLKATDIERRFGF-RGLPRDYEGFLQPDGGTIDVRGTLAALFT 161 (397)
T ss_dssp CEECCCEEEEECSSCCBTTBCHHHHHHHHHHTTCCCEEEEHHHHHHHHCC-CSCCTTCEEEEETTCEEEEHHHHHHHHHH
T ss_pred HHHHCCcEEEcCCCccchhHHHHHHHHHHHHcCCCceecCHHHHHhhCcC-ccCCCceeEEEcCCCCEEcHHHHHHHHHH
Confidence 666666665543322 4456666777778888888898888888887 55556678899999999999999999999
Q ss_pred HHHHcCCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcChhhhhhhhcCCCcceeEEEEEEEEEEecC
Q 015072 162 LAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWVGKLVKKISGLELPIQAVETSVCYWRIKE 241 (413)
Q Consensus 162 ~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~~~l~~~~~g~~~p~~~~~~~~~~~~~~~ 241 (413)
.+++.|++++++++|++|.. + ++.+.|++++++ ++||.||+|+|+|+..+++.+ +..+|+.+.++++++++...
T Consensus 162 ~a~~~Gv~i~~~~~V~~i~~--~--~~~v~v~t~~g~-i~a~~VV~A~G~~s~~l~~~~-g~~~p~~~~~~~~~~~~~~~ 235 (397)
T 2oln_A 162 LAQAAGATLRAGETVTELVP--D--ADGVSVTTDRGT-YRAGKVVLACGPYTNDLLEPL-GARLAYSVYEMAIAAYRQAT 235 (397)
T ss_dssp HHHHTTCEEEESCCEEEEEE--E--TTEEEEEESSCE-EEEEEEEECCGGGHHHHHGGG-TCCCCEEEEEEEEEEEEBCS
T ss_pred HHHHcCCEEECCCEEEEEEE--c--CCeEEEEECCCE-EEcCEEEEcCCcChHHHhhhc-CCCCCeeEEEEEEEEEeecC
Confidence 99999999999999999998 6 346778877764 999999999999998888877 77899999999999887443
Q ss_pred CCccccccCCCCceEEecC-CC-----eeEecCCCCCC--CeEEEEeCC--CCcCCCCCCCCCCC-cchHHHHHHHHhhc
Q 015072 242 GDEADYAVGGDFPSFASYG-DP-----HVYGTPSLEYP--GLIKIALHR--GYLCDPDRRPWGPG-PLLDSLKELIQGRF 310 (413)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~-~~-----~~~~~p~~~~~--g~~~~~~~~--~~~~~~~~~~~~~~-~~~~~l~~~~~~~~ 310 (413)
. .+ .+|.+.... +. .+|++|..+.. +.+.++.+. +...+++..+.... +..+.+.+.+.++|
T Consensus 236 ~---~~----~~p~~~~~~~~~~~~~~~~y~~p~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 308 (397)
T 2oln_A 236 P---VT----EAPFWFAFQQPTPQDTNLFYGFGHNPWAPGEFVRCGPDFEVDPLDHPSAATGVADRRQMDRLSGWLRDHL 308 (397)
T ss_dssp C---CS----CCCEEEEECCCCSSSCCCEEECCCCSSSSSSEEEEEECCCCSCCSSGGGCCSSCCHHHHHHHHHHHHHHC
T ss_pred c---cc----CCCEEEEecCCCCcccceEEECCCCCCCCCceEEEEecCCCCCcCCCccccCCCCHHHHHHHHHHHHHhC
Confidence 1 11 245444322 21 58998876532 145555432 22223322222222 26788999999999
Q ss_pred CCCCCCCCCceeeeeeee--ccCCCCeEEecCCC----CCCCCEEEEeCCCccccccchHHHHHHHHHHHcCCCCccccc
Q 015072 311 AGRVDSSGPAATQLCMYS--MTPDKDFVIDFLGG----ELGEDVVVAGGFSGHGFKMAPVVGRILADLVLSGEAQGVELR 384 (413)
Q Consensus 311 p~~~~~~~~~~~~~g~~~--~t~d~~p~ig~~~~----~~~~~~~~~~G~~~~G~~~a~~~a~~~a~~i~~~~~~~~~~~ 384 (413)
|.+.+ .+...|+|+++ +|+|+.|+||++|. . +|+|+++| |+|+++||++|+++|++|+++.+ ..+++
T Consensus 309 p~l~~--~~~~~~~g~~~~p~t~D~~p~ig~~~~~~~~~--~~l~~a~G--g~G~~~ap~~g~~la~~i~~~~~-~~~~~ 381 (397)
T 2oln_A 309 PTVDP--DPVRTSTCLAVLPTDPERQFFLGTARDLMTHG--EKLVVYGA--GWAFKFVPLFGRICADLAVEDST-AYDIS 381 (397)
T ss_dssp TTBCS--SCSEEEEEEEEEESSTTCCCEEEESTTTSTTG--GGEEEEEE--SSCGGGHHHHHHHHHHHHHHSCC-SSCCG
T ss_pred CCCCC--CceeEEEEEecCCcCCCCCeEeecCCccccCC--CCEEEEeC--cchhhccHHHHHHHHHHHhCCCC-CCCcc
Confidence 99874 46788999988 99999999999986 6 89999999 78999999999999999995554 67899
Q ss_pred cccccccCCC
Q 015072 385 HFRIARFKEN 394 (413)
Q Consensus 385 ~~~~~R~~~~ 394 (413)
.|+++||...
T Consensus 382 ~f~~~Rf~~~ 391 (397)
T 2oln_A 382 RLAPQSALLE 391 (397)
T ss_dssp GGSCCC----
T ss_pred ccccChhhhh
Confidence 9999999653
No 5
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=100.00 E-value=9.1e-45 Score=337.76 Aligned_cols=362 Identities=29% Similarity=0.581 Sum_probs=278.5
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCCCCcceecccCC-ccccchHHHHHHHHHHHHHhcCC-
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESRTIRATYPE-DYYHPMVLESSLLWEQAQSEIGY- 84 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~~~~~~s~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~- 84 (413)
++||+|||||++|+++|++|+++|++|+|||+....++.+++++..+.++..+.. ..+..+...+.+.|+++. ..++
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~-~~~~~ 80 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMPPHQHGSHHGDTRLIRHAYGEGEKYVPLVLRAQMLWDELS-RHNED 80 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHTTCCEEEECSSCSSSSSSSCCSSEEEECSSCTTCGGGHHHHHHHHHHHHHHH-TTCSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCccceeeeccCCCchHHHHHHHHHHHHHHHH-HhCCC
Confidence 4899999999999999999999999999999998776555555555555543432 345677788889999888 6665
Q ss_pred -eeEeeeeeeeeCCCChHHHHHHHHHHHhCCCCccccCHHHHHHhcCCcccCCCCeEEEEecCCeeecHHHHHHHHHHHH
Q 015072 85 -KVYFKAHQFDMGPSENKSLRSVIASCRKNSVPHQVLDCRQVLQKYSGRIEIPENWVGVTTELGGVIKPTKAVSMFQTLA 163 (413)
Q Consensus 85 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 163 (413)
..+...+.+.+...+.+.+....+.++..+.+.+.++.+++.+.+|. +..+....+++.+.+++++|..+++.|.+.+
T Consensus 81 ~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~-~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~ 159 (372)
T 2uzz_A 81 DPIFVRSGVINLGPADSTFLANVAHSAEQWQLNVEKLDAQGIMARWPE-IRVPDNYIGLFETDSGFLRSELAIKTWIQLA 159 (372)
T ss_dssp SCSEECCCEEEEEETTCHHHHHHHHHHHHTTCCEEEEEHHHHHHHCTT-CCCCTTEEEEEESSCEEEEHHHHHHHHHHHH
T ss_pred ccceeeeceEEEeCCCcHHHHHHHHHHHHcCCCcEecCHHHHHhhCCC-ccCCCCceEEEeCCCcEEcHHHHHHHHHHHH
Confidence 34556666655544445566667777888999999999999999987 6556677899999999999999999999999
Q ss_pred HHcCCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcChhhhhhhhcCCCcceeEEEEEEEEEEecCCC
Q 015072 164 IKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWVGKLVKKISGLELPIQAVETSVCYWRIKEGD 243 (413)
Q Consensus 164 ~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~~~l~~~~~g~~~p~~~~~~~~~~~~~~~~~ 243 (413)
++.|++++++++|++|.. + ++.+.+++.+|+ ++||.||+|+|+|+..+++. +|+.|.++++++++.+..
T Consensus 160 ~~~G~~i~~~~~V~~i~~--~--~~~~~v~~~~g~-~~a~~vV~a~G~~s~~l~~~-----l~~~p~rg~~~~~~~~~~- 228 (372)
T 2uzz_A 160 KEAGCAQLFNCPVTAIRH--D--DDGVTIETADGE-YQAKKAIVCAGTWVKDLLPE-----LPVQPVRKVFAWYQADGR- 228 (372)
T ss_dssp HHTTCEEECSCCEEEEEE--C--SSSEEEEESSCE-EEEEEEEECCGGGGGGTSTT-----CCCEEEECCEEEECCCGG-
T ss_pred HHCCCEEEcCCEEEEEEE--c--CCEEEEEECCCe-EEcCEEEEcCCccHHhhccc-----cCceEEEEEEEEEEeccc-
Confidence 999999999999999998 6 345788888886 99999999999999877663 589999999888764321
Q ss_pred ccccccCCCCceEEec--CCCeeEecCCCCCCCeEEEEeCC-CCcCCC--CCCCCCC-CcchHHHHHHHHhhcCCCCCCC
Q 015072 244 EADYAVGGDFPSFASY--GDPHVYGTPSLEYPGLIKIALHR-GYLCDP--DRRPWGP-GPLLDSLKELIQGRFAGRVDSS 317 (413)
Q Consensus 244 ~~~~~~~~~~~~~~~~--~~~~~~~~p~~~~~g~~~~~~~~-~~~~~~--~~~~~~~-~~~~~~l~~~~~~~~p~~~~~~ 317 (413)
+.....+|.+... ....+|++|..+ +.++++.+. +...++ +..+... .+..+.+.+.+.+++|.+.+
T Consensus 229 ---~~~~~~~p~~~~~~~~~~~~y~~p~~~--~~~~iG~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~P~l~~-- 301 (372)
T 2uzz_A 229 ---YSVKNKFPAFTGELPNGDQYYGFPAEN--DALKIGKHNGGQVIHSADERVPFAEVVSDGSEAFPFLRNVLPGIGC-- 301 (372)
T ss_dssp ---GSTTTTCCEEEEECTTCCEEEEECCSS--SCEEEEESSCCEECCSGGGCCCTTTSTTGGGSSHHHHHHHSCSCCC--
T ss_pred ---cCccccCCEEEEecCCCCeEEecCCCC--CeEEEEecCCCCccCChhhccCCCCCHHHHHHHHHHHHHHCCCCCc--
Confidence 1111124544322 224578888754 445554422 111111 1111111 12677788999999999873
Q ss_pred CCceeeeeeeeccCCCCeEEecCCCCCCCCEEEEeCCCccccccchHHHHHHHHHHHcCCCCccccccccccccC
Q 015072 318 GPAATQLCMYSMTPDKDFVIDFLGGELGEDVVVAGGFSGHGFKMAPVVGRILADLVLSGEAQGVELRHFRIARFK 392 (413)
Q Consensus 318 ~~~~~~~g~~~~t~d~~p~ig~~~~~~~~~~~~~~G~~~~G~~~a~~~a~~~a~~i~~~~~~~~~~~~~~~~R~~ 392 (413)
....|+|+||+|+|+.|+||++|.. +|+|+++||+|+|+++||++|+++|++|+++ ..+.+++.|+|+||.
T Consensus 302 -~~~~~~g~r~~t~d~~p~ig~~~~~--~~l~~~~G~~g~G~~~ap~~g~~la~~i~~~-~~~~~~~~~~~~Rf~ 372 (372)
T 2uzz_A 302 -CLYGAACTYDNSPDEDFIIDTLPGH--DNTLLITGLSGHGFKFASVLGEIAADFAQDK-KSDFDLTPFRLSRFQ 372 (372)
T ss_dssp -EEEECCCEEEECTTSCCCEEEETTE--EEEEEECCCCSCCGGGHHHHHHHHHHHHTTC-CCSSCCGGGCSTTCC
T ss_pred -cceeeEEeeccCCCCCeEEecCCCC--CCEEEEeCCCccchhccHHHHHHHHHHHhCC-CCCCCccccCcCCCC
Confidence 5678999999999999999999977 8999999999999999999999999999954 446788999999984
No 6
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=100.00 E-value=1e-41 Score=320.91 Aligned_cols=371 Identities=21% Similarity=0.207 Sum_probs=283.8
Q ss_pred CCccEEEECCCHHHHHHHHHHHH-cC-CcEEEEcccCCCCCCCCCCCCCcceecccCCccccchHHHHHHHHHHHHHhcC
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAK-RG-QKTLLLEQFDFLHHRGSSHGESRTIRATYPEDYYHPMVLESSLLWEQAQSEIG 83 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~-~g-~~V~lvE~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (413)
.++||+|||||++|+++|++|++ +| ++|+|||+...+ .++|..+.+.++..+.......+...+.+.|.++.+..+
T Consensus 20 ~~~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~~~~--~gas~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 97 (405)
T 2gag_B 20 KSYDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGWLA--GGNMARNTTIIRSNYLWDESAGIYEKSLKLWEQLPEDLE 97 (405)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSSSTT--CSGGGTSCCCBCCCCSSHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CcCCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCCCCC--CCcccccCceeeecCCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 46899999999999999999999 99 999999998854 356666777777766665566777788889999988877
Q ss_pred Cee-EeeeeeeeeCCCC--hHHHHHHHHHHHhCCCCccccCHHHHHHhcCCcccC-----CCCeEEEEecCCeeecHHHH
Q 015072 84 YKV-YFKAHQFDMGPSE--NKSLRSVIASCRKNSVPHQVLDCRQVLQKYSGRIEI-----PENWVGVTTELGGVIKPTKA 155 (413)
Q Consensus 84 ~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~ 155 (413)
.++ +...+.+...... .+.+....+.+...+.++++++.+++.+.+|. +.. .....+++.+.+++++|..+
T Consensus 98 ~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (405)
T 2gag_B 98 YDFLFSQRGVLNLAHTLGDVRESVRRVEANKLNGVDAEWLDPSQVKEACPI-INTSDDIRYPVMGATWQPRAGIAKHDHV 176 (405)
T ss_dssp CCCCCBCCCEEEEECSHHHHHHHHHHHHHHHTBTCCCEEECHHHHHHHCTT-SCCSTTSSSCCCEEEEETTCBBCCHHHH
T ss_pred CCcCEecccEEEEEcCHHHHHHHHHHHHHHHhcCCCceEeCHHHHHhhCCC-CcccccccccceeEEEeCCCccCCHHHH
Confidence 765 3444555543322 23445566667778888899999999888887 543 35567899999999999999
Q ss_pred HHHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcChhhhhhhhcCCCcceeEEEEEEE
Q 015072 156 VSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWVGKLVKKISGLELPIQAVETSVC 235 (413)
Q Consensus 156 ~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~~~l~~~~~g~~~p~~~~~~~~~ 235 (413)
++.|.+.+++.|++++++++|++|.. ++ +..+.|++.+|+ +.||.||+|+|+|+..+.+.+ +..+|+.+.+++++
T Consensus 177 ~~~l~~~~~~~g~~i~~~~~v~~i~~--~~-~~~~~v~~~~g~-~~a~~vV~a~G~~s~~l~~~~-g~~~~~~~~~~~~~ 251 (405)
T 2gag_B 177 AWAFARKANEMGVDIIQNCEVTGFIK--DG-EKVTGVKTTRGT-IHAGKVALAGAGHSSVLAEMA-GFELPIQSHPLQAL 251 (405)
T ss_dssp HHHHHHHHHHTTCEEECSCCEEEEEE--SS-SBEEEEEETTCC-EEEEEEEECCGGGHHHHHHHH-TCCCCEEEEEEEEE
T ss_pred HHHHHHHHHHCCCEEEcCCeEEEEEE--eC-CEEEEEEeCCce-EECCEEEECCchhHHHHHHHc-CCCCCccccceeEE
Confidence 99999999999999999999999998 63 244678888884 999999999999998887766 88899999999988
Q ss_pred EEEecCCCccccccCCCCceEEecCCCeeEecCCCCCCCeEEEEeCCCCcCCCCCCCCCCCcchHHHHHHHHhhcCCCCC
Q 015072 236 YWRIKEGDEADYAVGGDFPSFASYGDPHVYGTPSLEYPGLIKIALHRGYLCDPDRRPWGPGPLLDSLKELIQGRFAGRVD 315 (413)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~ 315 (413)
..+..... + .+.+.. .+..+|++|..+ |.+.++.........+ .....+..+.+.+.+.+++|.+.+
T Consensus 252 ~~~~~~~~---~-----~~~~~~-~~~~~y~~p~~~--g~~~ig~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~p~l~~ 318 (405)
T 2gag_B 252 VSELFEPV---H-----PTVVMS-NHIHVYVSQAHK--GELVMGAGIDSYNGYG--QRGAFHVIQEQMAAAVELFPIFAR 318 (405)
T ss_dssp EEEEBCSC---C-----CSEEEE-TTTTEEEEECTT--SEEEEEEEECSSCCCS--SCCCTHHHHHHHHHHHHHCGGGGG
T ss_pred EecCCccc---c-----CceEEe-CCCcEEEEEcCC--CcEEEEeccCCCCccc--cCCCHHHHHHHHHHHHHhCCcccc
Confidence 76522110 0 122222 234578888643 5444443221111111 111223788899999999999875
Q ss_pred CCCCceeeeeeeeccCCCCeEEecCCCCCCCCEEEEeCCCccccccchHHHHHHHHHHHcCCCCccccccccccccCCCC
Q 015072 316 SSGPAATQLCMYSMTPDKDFVIDFLGGELGEDVVVAGGFSGHGFKMAPVVGRILADLVLSGEAQGVELRHFRIARFKENP 395 (413)
Q Consensus 316 ~~~~~~~~~g~~~~t~d~~p~ig~~~~~~~~~~~~~~G~~~~G~~~a~~~a~~~a~~i~~~~~~~~~~~~~~~~R~~~~~ 395 (413)
. .+...|+|+|++++|+.|+||++| . +|+|+++|++|+|+++||.+|+++|++|.++.+ ..+++.|+++||...+
T Consensus 319 ~-~~~~~w~g~~~~t~d~~p~ig~~~-~--~~l~~~~G~~g~G~~~a~~~g~~la~~i~g~~~-~~~~~~~~~~R~~~~~ 393 (405)
T 2gag_B 319 A-HVLRTWGGIVDTTMDASPIISKTP-I--QNLYVNCGWGTGGFKGTPGAGFTLAHTIANDEP-HELNKPFSLERFETGH 393 (405)
T ss_dssp C-EECEEEEEEEEEETTSCCEEEECS-S--BTEEEEECCGGGCSTTHHHHHHHHHHHHHHTSC-CTTTTTSCSTHHHHTC
T ss_pred C-CcceEEeeccccCCCCCCEecccC-C--CCEEEEecCCCchhhHHHHHHHHHHHHHhCCCC-CccccccCcchhcCCc
Confidence 3 466789999999999999999988 4 899999999999999999999999999995554 5589999999998877
Q ss_pred CCCcccc
Q 015072 396 KGNVKDY 402 (413)
Q Consensus 396 ~~~~~~~ 402 (413)
..++...
T Consensus 394 ~~~~~~~ 400 (405)
T 2gag_B 394 LIDEHGA 400 (405)
T ss_dssp CCCCTTT
T ss_pred cccCccc
Confidence 6665543
No 7
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=100.00 E-value=1.7e-41 Score=323.16 Aligned_cols=369 Identities=20% Similarity=0.223 Sum_probs=267.3
Q ss_pred CCccEEEECCCHHHHHHHHHHHHcC-CcEEEEcc-cCCCCCCCCCCCCCcceecccCCccccchHHHHHHHHHHHHHhcC
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAKRG-QKTLLLEQ-FDFLHHRGSSHGESRTIRATYPEDYYHPMVLESSLLWEQAQSEIG 83 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~~g-~~V~lvE~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (413)
.++||+|||||++|+++|++|+++| ++|+|||+ .... .++|..+.+.++..+.......+...+.+.|.++.+. +
T Consensus 22 ~~~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~~~~~~--~g~S~~~~g~i~~~~~~~~~~~l~~~~~~~~~~l~~~-g 98 (448)
T 3axb_A 22 PRFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDAGHAPG--SGDSGRSMAAFRTFFSSTMNRLVAGSTVRLFEDAQRG-G 98 (448)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHHCSCEEEEESSSSTT--CSGGGSSCCEEECCCSSHHHHHHHHHHHHHHHHHHHT-T
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCcEEEEccCCCCC--CCcccCCCcEecccCCCHHHHHHHHHHHHHHHHHHhc-C
Confidence 4689999999999999999999999 99999999 5443 3566777788887776655667778888889988776 6
Q ss_pred Cee-EeeeeeeeeCCCC-hHHHHHHHHHHHhCCCCc-----ccc-----------CHHHHHHhcCCcccCCCCeEEEEec
Q 015072 84 YKV-YFKAHQFDMGPSE-NKSLRSVIASCRKNSVPH-----QVL-----------DCRQVLQKYSGRIEIPENWVGVTTE 145 (413)
Q Consensus 84 ~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~-----~~l-----------~~~~~~~~~p~~~~~~~~~~~~~~~ 145 (413)
.++ +...+.+...... ...+....+.+...+.+. +++ +.+++.. .. ......+++.+
T Consensus 99 ~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~g~~~~p~~~~~l~~~g~~~~~~~~~~~~~~-~~----~~~~~~~~~~~ 173 (448)
T 3axb_A 99 EDLGLVKSGYLFVYDRERWREVEEPLREAGEEGRDYLIIPPEELERRLGMNTRVSDGEEAEV-LG----VGDVEGAVLIR 173 (448)
T ss_dssp CCCCCBCCCEEEEECHHHHHHHHHHHTTSCCBTTTEEEECHHHHHHHHCCCCCCTTSSHHHH-HT----CCCCCEEEEES
T ss_pred cccccccCCEEEEcCHHHHHHHHHHHHHHHhhCCCccccchhhhhhcccccccCCCHHHHHh-cc----CCCceEEEEeC
Confidence 554 3344444421111 122222333334456555 556 6666655 22 24456678888
Q ss_pred CCeeecHHHHHHHHHHHHHHcCCeEecCceEEEEEeeec--------------cCCCcEEEEeCCccEE--EeCeEEEcC
Q 015072 146 LGGVIKPTKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKD--------------DVRGGVTVVTSSGEEF--WGKKCVVTA 209 (413)
Q Consensus 146 ~~~~~~~~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~--------------~~~~~~~v~~~~g~~i--~ad~vV~A~ 209 (413)
.++.+++.++++.|.+.+++.|++++++++|++|.. + +++..+.|.+.+|+ + .||.||+|+
T Consensus 174 ~~~~~~~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~--~~~~~~~~~~~~~~~~~~~v~~V~t~~g~-i~~~Ad~VV~At 250 (448)
T 3axb_A 174 SAGFLDAEKVVDYYYRRASGAGVEFIFGRRVVGVEL--KPRVELGIEGEPLPWQEARASAAVLSDGT-RVEVGEKLVVAA 250 (448)
T ss_dssp SEEECCHHHHHHHHHHHHHHTTCEEEESCCEEEEEE--EESSCCCCTTSSCTTSCEEEEEEEETTSC-EEEEEEEEEECC
T ss_pred CCeEEcHHHHHHHHHHHHHhCCCEEEcCCeEEEEEe--cccccccccccccccCCCceEEEEeCCCE-EeecCCEEEECC
Confidence 899999999999999999999999999999999976 3 22233467788885 8 999999999
Q ss_pred CcChhhhhhhhcCCCcceeEEEEEEEEEEecCC-Ccc-----ccccCCCCceEEecCCCeeEecCCCCCCCeEEEEeCCC
Q 015072 210 GAWVGKLVKKISGLELPIQAVETSVCYWRIKEG-DEA-----DYAVGGDFPSFASYGDPHVYGTPSLEYPGLIKIALHRG 283 (413)
Q Consensus 210 G~~~~~l~~~~~g~~~p~~~~~~~~~~~~~~~~-~~~-----~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~~ 283 (413)
|+|+..+++.+ +..+|+.|.+++++.++.... ... .+.....+|.+... ..+|++|..+. |.++++.+..
T Consensus 251 G~~s~~l~~~~-g~~~~~~p~rg~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~~~y~~p~~~~-g~~~iG~~~~ 326 (448)
T 3axb_A 251 GVWSNRLLNPL-GIDTFSRPKKRMVFRVSASTEGLRRIMREGDLAGAGAPPLIILP--KRVLVRPAPRE-GSFWVQLSDN 326 (448)
T ss_dssp GGGHHHHHGGG-TCCCSEEEEEEEEEEEECCSHHHHHHHHHCCTTSSSSCCEEEET--TTEEEEEETTT-TEEEEEECCC
T ss_pred CcCHHHHHHHc-CCCCcccccceEEEEeCCcccccccccccccccccCCCceEEcC--CceEEeecCCC-CeEEEecCCc
Confidence 99999898877 788999999999998874331 110 01111224555443 45888887531 4444444322
Q ss_pred CcCCCCCCCC--CC-Ccc-hHHHHHHHHhhcCCCCCCCCCceeeeeeeec-cCCCCeEEecCCCCCCCCEEEEeCCCccc
Q 015072 284 YLCDPDRRPW--GP-GPL-LDSLKELIQGRFAGRVDSSGPAATQLCMYSM-TPDKDFVIDFLGGELGEDVVVAGGFSGHG 358 (413)
Q Consensus 284 ~~~~~~~~~~--~~-~~~-~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~-t~d~~p~ig~~~~~~~~~~~~~~G~~~~G 358 (413)
.. ++...+. .. .+. .+.+.+.+.+++|.+.+. .+...|+|+||+ |+|+.|+||+++ +|+|+++|++|+|
T Consensus 327 ~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~P~l~~~-~~~~~w~G~r~~~t~d~~p~ig~~~----~~l~~a~G~~g~G 400 (448)
T 3axb_A 327 LG-RPFALEEDPQPEEHYYSLAILPILSLYLPQFQDA-YPSGGWAGHYDISFDANPVVFEPWE----SGIVVAAGTSGSG 400 (448)
T ss_dssp TT-SCBCCCSSCCCCHHHHHHHTHHHHHHHCGGGTTC-CCSEEEEEEEEEETTSSCEEECGGG----CSEEEEECCTTCC
T ss_pred cc-CCcccccccCCChHHHHHHHHHHHHHhCcCcccC-CcccceEEEeccccCCCCcEeeecC----CCEEEEECCCchh
Confidence 11 1111111 11 225 788999999999998863 567899999999 999999999987 7999999999999
Q ss_pred cccchHHHHHHHHHHHcCCCC------cccccccc-ccc-cCCCC
Q 015072 359 FKMAPVVGRILADLVLSGEAQ------GVELRHFR-IAR-FKENP 395 (413)
Q Consensus 359 ~~~a~~~a~~~a~~i~~~~~~------~~~~~~~~-~~R-~~~~~ 395 (413)
+++||++|+++|++|+++... ..+++.|+ |+| |...+
T Consensus 401 ~~~ap~~g~~la~~i~~~~~~~~~~~~~~~~~~~~~~~R~f~~~~ 445 (448)
T 3axb_A 401 IMKSDSIGRVAAAVALGMESVELYGGVEMPVKWMGLEGRRYEQER 445 (448)
T ss_dssp GGGHHHHHHHHHHHHTTCSEEECTTSCEEEGGGGSSTTCCCCCCS
T ss_pred HhHhHHHHHHHHHHHcCCCcccccccceecHhHcCccccccccCC
Confidence 999999999999999955542 16789999 999 87643
No 8
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=100.00 E-value=1.3e-40 Score=316.18 Aligned_cols=368 Identities=19% Similarity=0.245 Sum_probs=261.1
Q ss_pred CCCCccEEEECCCHHHHHHHHHHHHcCC-cEEEEcccCCCCCCCCCCCCCcceecccCCcccc------chHHHHHHHHH
Q 015072 4 SGENFDVIVVGAGIMGSSAAYQLAKRGQ-KTLLLEQFDFLHHRGSSHGESRTIRATYPEDYYH------PMVLESSLLWE 76 (413)
Q Consensus 4 ~~~~~dvvIIGgG~aG~~~A~~L~~~g~-~V~lvE~~~~~~~~~~s~~~~~~~~~~~~~~~~~------~~~~~~~~~~~ 76 (413)
|..++||+|||||++|+++|++|+++|+ +|+|||+....++.+++......+...+....+. .+...+...|.
T Consensus 3 ~~~~~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 82 (438)
T 3dje_A 3 VTKSSSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYPVPSAISAGNDVNKVISSGQYSNNKDEIEVNEILAEEAFNGWK 82 (438)
T ss_dssp CCTTSCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSCSSCTTCTTCSSCEEECCCCSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCCCCCCCccCCCCccEEEeccCCchhhhcchhHHHHHHHHHHHh
Confidence 4457999999999999999999999999 9999999988765555444444555555554455 66667777776
Q ss_pred HHHHhcCCeeEeeeeeeeeCCCChHHHHHHHHHHH-hCCCCc-cccCHHHHHHhcCCcccCCCCeE--EEEecCC-eeec
Q 015072 77 QAQSEIGYKVYFKAHQFDMGPSENKSLRSVIASCR-KNSVPH-QVLDCRQVLQKYSGRIEIPENWV--GVTTELG-GVIK 151 (413)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~-~~l~~~~~~~~~p~~~~~~~~~~--~~~~~~~-~~~~ 151 (413)
.+. .....+...+.+..... ...+..+..... ..+... ++++.+++.+.+|..+....... +++.+.+ +.++
T Consensus 83 ~~~--~~~~~~~~~g~l~~~~~-~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~p~~l~~~~~~g~~g~~~~~~~g~~~ 159 (438)
T 3dje_A 83 NDP--LFKPYYHDTGLLMSACS-QEGLDRLGVRVRPGEDPNLVELTRPEQFRKLAPEGVLQGDFPGWKGYFARSGAGWAH 159 (438)
T ss_dssp HCT--TTGGGEECCCEEEEECS-HHHHHHHHHHHCGGGCTTCEEECSHHHHHTTSCTTTSCSCCTTCEEEEESSSCEEEC
T ss_pred hCc--cccCcEeccceEEEecC-cchHHHHHHHHhhcccCCceecCCHHHHHHhCCcccccCCCCCceEEEeCCCCEEec
Confidence 542 11122444555544332 222222222222 345555 77888888887773011122233 8889999 9999
Q ss_pred HHHHHHHHHHHHHHcCCeEecCc---eEEEEEeeeccCCCcEE-EEeCCccEEEeCeEEEcCCcChhhhhhhhcCCCcce
Q 015072 152 PTKAVSMFQTLAIKNGAVLRDNT---EVKTVLKVKDDVRGGVT-VVTSSGEEFWGKKCVVTAGAWVGKLVKKISGLELPI 227 (413)
Q Consensus 152 ~~~~~~~l~~~~~~~gv~i~~~~---~V~~i~~~~~~~~~~~~-v~~~~g~~i~ad~vV~A~G~~~~~l~~~~~g~~~p~ 227 (413)
+..+++.|.+.+++.|++|++++ +|++|.. + ++.+. |++.+|++++||.||+|+|+|+..+++ + ..++
T Consensus 160 ~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~--~--~~~v~gV~t~~G~~i~Ad~VV~AtG~~s~~l~~-l---~~~~ 231 (438)
T 3dje_A 160 ARNALVAAAREAQRMGVKFVTGTPQGRVVTLIF--E--NNDVKGAVTADGKIWRAERTFLCAGASAGQFLD-F---KNQL 231 (438)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEE--E--TTEEEEEEETTTEEEECSEEEECCGGGGGGTSC-C---TTCC
T ss_pred HHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEe--c--CCeEEEEEECCCCEEECCEEEECCCCChhhhcC-c---ccce
Confidence 99999999999999999999999 9999998 6 34555 889999779999999999999988866 3 3467
Q ss_pred eEEEEEEEEEEecCCCccccccCCCCceEEecCCCeeEecCCCCCCCeEEEEeC-CCCcC-----------CCCCCCCCC
Q 015072 228 QAVETSVCYWRIKEGDEADYAVGGDFPSFASYGDPHVYGTPSLEYPGLIKIALH-RGYLC-----------DPDRRPWGP 295 (413)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~-~~~~~-----------~~~~~~~~~ 295 (413)
.|.++++.++.+++.....+ ..+|++.... ..+|+.|..+ ++.++++.+ .+... .|...+..+
T Consensus 232 ~p~~~~~~~~~l~~~~~~~~---~~~p~~~~~~-~~~~~~p~~~-~~~l~i~~~~~g~~~~~~~~~~~~~~~p~~~~~~~ 306 (438)
T 3dje_A 232 RPTAWTLVHIALKPEERALY---KNIPVIFNIE-RGFFFEPDEE-RGEIKICDEHPGYTNMVQSADGTMMSIPFEKTQIP 306 (438)
T ss_dssp EEEEEEEEEEECCGGGHHHH---TTCCEEEETT-TEEECSCCTT-TCEEEEEECCSCEECEEECTTCCEEECCCCCSSCB
T ss_pred eeEEEEEEEEEcChHHhhhh---cCCCEEEECC-CceecCCCCC-CCeEEEEeCCCCccCCccCCCcccccCCcccccCC
Confidence 77777777776554321112 2366665443 4577666533 355655432 22221 011011112
Q ss_pred CcchHHHHHHHHhhcCCCCCCCCCceeeeeeeeccCCCCeEEecCCCCCCCCEEEEeCCCccccccchHHHHHHHHHHHc
Q 015072 296 GPLLDSLKELIQGRFAGRVDSSGPAATQLCMYSMTPDKDFVIDFLGGELGEDVVVAGGFSGHGFKMAPVVGRILADLVLS 375 (413)
Q Consensus 296 ~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~t~d~~p~ig~~~~~~~~~~~~~~G~~~~G~~~a~~~a~~~a~~i~~ 375 (413)
.+..+.+.+.+.++||.+.+. .+...|+|+|++|||+.|+||++|.. +|+|+++||+|+|++++|++|+++|++|+
T Consensus 307 ~~~~~~l~~~~~~~~P~l~~~-~~~~~~~g~~~~t~D~~piig~~p~~--~~l~~a~G~~g~G~~~ap~~g~~la~~i~- 382 (438)
T 3dje_A 307 KEAETRVRALLKETMPQLADR-PFSFARICWCADTANREFLIDRHPQY--HSLVLGCGASGRGFKYLPSIGNLIVDAME- 382 (438)
T ss_dssp HHHHHHHHHHHHHHCGGGTTC-CCSEEEEEEEEECTTSCCEEEECSSC--TTEEEEECCTTCCGGGTTTHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHhCcccccC-CcceeeEEEeCcCCCCCeEEeecCCC--CCEEEEECCCCcchhhhHHHHHHHHHHHh-
Confidence 226788999999999999874 56789999999999999999999987 99999999999999999999999999998
Q ss_pred CCCCcccccccccccc
Q 015072 376 GEAQGVELRHFRIARF 391 (413)
Q Consensus 376 ~~~~~~~~~~~~~~R~ 391 (413)
|...+.+.+.|+++|.
T Consensus 383 g~~~~~~~~~~~~~~~ 398 (438)
T 3dje_A 383 GKVPQKIHELIKWNPD 398 (438)
T ss_dssp TCCCHHHHHHHSCCHH
T ss_pred CCCChhhccccCCCCc
Confidence 6654667788888774
No 9
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=100.00 E-value=1e-40 Score=332.31 Aligned_cols=365 Identities=15% Similarity=0.127 Sum_probs=262.4
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCCCCcceecccCCcc--ccchHHHHHHHHHHHHHhcCC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESRTIRATYPEDY--YHPMVLESSLLWEQAQSEIGY 84 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~~~~~~s~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 84 (413)
.+||+|||||++|+++|+.|+++|++|+|||+....+ .+++....|.+.+...... ..++...+.....++.+..+.
T Consensus 272 ~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~g-~gaS~~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 350 (676)
T 3ps9_A 272 KREAAIIGGGIASALLSLALLRRGWQVTLYCADEAPA-LGASGNRQGALYPLLSKHDEALNRFFSNAFTFARRFYDQLPV 350 (676)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSS-CSTTCCSCEEECCCCCSSCHHHHHHHHHHHHHHHHHHHHCCS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCccc-ccCccCCCceecCcCCCCccHHHHHHHHHHHHHHHHHHHCCC
Confidence 4899999999999999999999999999999976554 3556666666665443321 223332233333344444454
Q ss_pred ee-EeeeeeeeeCCCChHHHHHHHHHHHhCCCCcc---ccCHHHHHHhcCCcccCCCCeEEEEecCCeeecHHHHHHHHH
Q 015072 85 KV-YFKAHQFDMGPSENKSLRSVIASCRKNSVPHQ---VLDCRQVLQKYSGRIEIPENWVGVTTELGGVIKPTKAVSMFQ 160 (413)
Q Consensus 85 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 160 (413)
.+ +...+.+.... +..... ....+...+++.+ +++.+++....+. .....+++.+.++.++|..+++.|.
T Consensus 351 ~~~~~~~g~l~~~~-~~~~~~-~~~~~~~~g~~~~~~~~l~~~~~~~~~~l----~~~~gg~~~p~~g~v~p~~l~~aL~ 424 (676)
T 3ps9_A 351 KFDHDWCGVTQLGW-DEKSQH-KIAQMLSMDLPAELAVAVEANAVEQITGV----ATNCSGITYPQGGWLCPAELTRNVL 424 (676)
T ss_dssp CCCEECCCEEEECC-SHHHHH-HHHHHHTSCCCTTTCEEECHHHHHHHHSS----CCSSCEEEETTCEEECHHHHHHHHH
T ss_pred CcCcCcCCeeeecC-CHHHHH-HHHHHHhcCCcHHHhhhCCHHHHHHhhCC----CccCCcEEecCCeeeCHHHHHHHHH
Confidence 44 22334444433 223332 2233445566655 8888888877663 4566788999999999999999999
Q ss_pred HHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcChhhhhhhhcCCCcceeEEEEEEEEEEec
Q 015072 161 TLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWVGKLVKKISGLELPIQAVETSVCYWRIK 240 (413)
Q Consensus 161 ~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~~~l~~~~~g~~~p~~~~~~~~~~~~~~ 240 (413)
+.+++.|++|+++++|++|.. + ++.+.|++.+|.++.||.||+|+|+|+..+.... .+|+.|.+|+++.++..
T Consensus 425 ~~a~~~Gv~i~~~t~V~~l~~--~--~~~v~V~t~~G~~i~Ad~VVlAtG~~s~~l~~~~---~lpl~p~rGq~~~~~~~ 497 (676)
T 3ps9_A 425 ELAQQQGLQIYYQYQLQNFSR--K--DDCWLLNFAGDQQATHSVVVLANGHQISRFSQTS---TLPVYSVAGQVSHIPTT 497 (676)
T ss_dssp HHHHHTTCEEEESCCEEEEEE--E--TTEEEEEETTSCEEEESEEEECCGGGGGCSTTTT---TCSCEEEEEEEEEEECC
T ss_pred HHHHhCCCEEEeCCeeeEEEE--e--CCeEEEEECCCCEEECCEEEECCCcchhcccccc---CCcceeecCEEEEECCC
Confidence 999999999999999999998 7 4568888888777999999999999998776654 47999999999988744
Q ss_pred CCCccccccCCCCceEEecCCCeeEecCCCCCCCeEEEEeCCCC-cCCCCCCCCCCCcchHHHHHHHHhhcCCCC---CC
Q 015072 241 EGDEADYAVGGDFPSFASYGDPHVYGTPSLEYPGLIKIALHRGY-LCDPDRRPWGPGPLLDSLKELIQGRFAGRV---DS 316 (413)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~---~~ 316 (413)
+... .++.....+ .|++|....+|.++++..... ..++. . ..+..+.+.+.+.+++|.+. +.
T Consensus 498 ~~~~-------~l~~~l~~~---~Yl~P~~~~~g~~~iG~t~~~~~~d~~---~-~~~~~~~~l~~l~~~~P~l~~~~~~ 563 (676)
T 3ps9_A 498 PELA-------ELKQVLCYD---GYLTPQNPANQHHCIGASYHRGSEDTA---Y-SEDDQQQNRQRLIDCFPQAQWAKEV 563 (676)
T ss_dssp TTGG-------GCCSEEESS---SEECCCBTTTTEEEEECCCEETCCCCC---C-CHHHHHHHHHHHHHHSTTCHHHHTC
T ss_pred cccc-------cCCceeECC---eeeccccCCCCeEEEeeccCCCCCCCC---C-CHHHHHHHHHHHHHhCCCccccccC
Confidence 3211 123233322 688887622365555542211 11111 1 11256788888999999875 11
Q ss_pred -CCCceeeeeeeeccCCCCeEEecCCC-----------------------CCCCCEEEEeCCCccccccchHHHHHHHHH
Q 015072 317 -SGPAATQLCMYSMTPDKDFVIDFLGG-----------------------ELGEDVVVAGGFSGHGFKMAPVVGRILADL 372 (413)
Q Consensus 317 -~~~~~~~~g~~~~t~d~~p~ig~~~~-----------------------~~~~~~~~~~G~~~~G~~~a~~~a~~~a~~ 372 (413)
......|+|+||+|+|++|+||++|. . +|+|+++||||+|+++||++|+++|++
T Consensus 564 d~~~~~~~~G~R~~t~D~lPiiG~~p~~~~~~~~y~~l~~~~~~~~~~~~~--~~l~~a~G~g~~Gl~~Ap~~ae~lA~~ 641 (676)
T 3ps9_A 564 DVSDKEARCGVRCATRDHLPMVGNVPDYEATLVEYASLAEQKDEAVSAPVF--DDLFMFAALGSRGLCSAPLCAEILAAQ 641 (676)
T ss_dssp CCTTCCEEEEEEEECTTCCCEEEEEECHHHHHHHTTTTTSCCTTCCSCCEE--EEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cccccceEEEEeCccCCcCCccCcCCChHHHHHHHHhhhccccccccCCCC--CCEeeeecccccHHHHHHHHHHHHHHH
Confidence 13578999999999999999999875 4 899999999999999999999999999
Q ss_pred HHcCCCCccc---cccccccccCCCCCCCcccc
Q 015072 373 VLSGEAQGVE---LRHFRIARFKENPKGNVKDY 402 (413)
Q Consensus 373 i~~~~~~~~~---~~~~~~~R~~~~~~~~~~~~ 402 (413)
|+ |++.+++ ++.|+|+||..+++.+.++.
T Consensus 642 i~-g~~~pl~~~~l~~~~p~Rf~~r~l~~~~~~ 673 (676)
T 3ps9_A 642 MS-DEPIPMDASTLAALNPNRLWVRKLLKGKAV 673 (676)
T ss_dssp HT-TCCCSSBHHHHHTTCTTHHHHHHHHTTC--
T ss_pred Hc-CCCCCCCHHHHhhhChHHhHHHHHhccCCC
Confidence 98 6665666 79999999988776665544
No 10
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=100.00 E-value=1.2e-40 Score=332.05 Aligned_cols=365 Identities=15% Similarity=0.128 Sum_probs=263.4
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCCCCcceecccCCcc--ccch----HHHHHHHHHHHHH
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESRTIRATYPEDY--YHPM----VLESSLLWEQAQS 80 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~~~~~~s~~~~~~~~~~~~~~~--~~~~----~~~~~~~~~~~~~ 80 (413)
++||+|||||++|+++|+.|+++|++|+|||++...+ .+++....|.+...+.... ..++ ...+.+.|.++..
T Consensus 264 ~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~g-~gaS~~~~G~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~l~~ 342 (689)
T 3pvc_A 264 CDDIAIIGGGIVSALTALALQRRGAVVTLYCADAQPA-QGASGNRQGALYPLLNGKNDALETFFTSAFTFARRQYDQLLE 342 (689)
T ss_dssp CSSEEEECCSHHHHHHHHHHHTTTCCEEEEESSSSTT-CSGGGCSCEEECCCCCSSCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCcEEEEeCCCccc-cccccccCCEEecCCCCCChHHHHHHHHHHHHHHHHHHHhhh
Confidence 5899999999999999999999999999999976554 3456666666665443221 2222 2335566666622
Q ss_pred hcCCee-EeeeeeeeeCCCChHHHHHHHHHHHhCCCCcc---ccCHHHHHHhcCCcccCCCCeEEEEecCCeeecHHHHH
Q 015072 81 EIGYKV-YFKAHQFDMGPSENKSLRSVIASCRKNSVPHQ---VLDCRQVLQKYSGRIEIPENWVGVTTELGGVIKPTKAV 156 (413)
Q Consensus 81 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (413)
.+.++ +...+.+.+.. ....... ...+...+++.+ .++.+++...++. .....+++.+.++.++|..++
T Consensus 343 -~~~~~~~~~~g~l~~~~-~~~~~~~-~~~~~~~g~~~~~~~~l~~~~~~~~~~l----~~~~gg~~~p~~g~v~p~~l~ 415 (689)
T 3pvc_A 343 -QGIAFDHQWCGVSQLAF-DDKSRGK-IEKMLHTQWPVEFAEAMSREQLSELAGL----DCAHDGIHYPAGGWLCPSDLT 415 (689)
T ss_dssp -TTCCCCEECCCEEEECC-SHHHHHH-HHHHTTSCCCTTTCEEECHHHHHHHHSS----CCSSCEEEETTCEEECHHHHH
T ss_pred -hccccccccCceEEecc-CHHHHHH-HHHHHhcCCChHHhhccCHHHHHHhcCC----CcccceEEecCCeEECHHHHH
Confidence 23443 33345554433 2233322 223345566655 8888888887763 456778999999999999999
Q ss_pred HHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeCCcc-EEEeCeEEEcCCcChhhhhhhhcCCCcceeEEEEEEE
Q 015072 157 SMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGE-EFWGKKCVVTAGAWVGKLVKKISGLELPIQAVETSVC 235 (413)
Q Consensus 157 ~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~-~i~ad~vV~A~G~~~~~l~~~~~g~~~p~~~~~~~~~ 235 (413)
+.|.+.+++.|++|+++++|++|.. + ++++.|++.+|+ ++.||.||+|+|+|+..+.... .+|+.|.+|+++
T Consensus 416 ~aL~~~a~~~Gv~i~~~t~V~~l~~--~--~~~v~V~t~~G~~~i~Ad~VVlAtG~~s~~l~~~~---~lpl~p~rGq~~ 488 (689)
T 3pvc_A 416 HALMMLAQQNGMTCHYQHELQRLKR--I--DSQWQLTFGQSQAAKHHATVILATGHRLPEWEQTH---HLPLSAVRGQVS 488 (689)
T ss_dssp HHHHHHHHHTTCEEEESCCEEEEEE--C--SSSEEEEEC-CCCCEEESEEEECCGGGTTCSTTTT---TSCCEEEEEEEE
T ss_pred HHHHHHHHhCCCEEEeCCeEeEEEE--e--CCeEEEEeCCCcEEEECCEEEECCCcchhcccccc---CCccccccCcEE
Confidence 9999999999999999999999998 7 345888888876 6999999999999998776654 479999999999
Q ss_pred EEEecCCCccccccCCCCceEEecCCCeeEecCCCCCCCeEEEEeCCCC-cCCCCCCCCCCCcchHHHHHHHHhhcCCCC
Q 015072 236 YWRIKEGDEADYAVGGDFPSFASYGDPHVYGTPSLEYPGLIKIALHRGY-LCDPDRRPWGPGPLLDSLKELIQGRFAGRV 314 (413)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~ 314 (413)
.++...... .++.....+ .|++|....+|.++++..... ..++. . ..+..+.+.+.+.+++|.+.
T Consensus 489 ~~~~~~~~~-------~l~~v~~~~---~Yl~P~~~~~g~~~iGat~~~~~~d~~---~-~~~~~~~ll~~l~~~~P~l~ 554 (689)
T 3pvc_A 489 HIPTTPVLS-------QLQQVLCYD---GYLTPVNPANQHHCIGASYQRGDIATD---F-RLTEQQENRERLLRCLPQVS 554 (689)
T ss_dssp EEECCTTGG-------GCCSEEESS---SEECCCBTTTTEEEEECCCEETBCCCC---C-CHHHHHHHHHHHHHHCTTCS
T ss_pred EECCCCccc-------cCCeeEeCC---ceEccccCCCCeEEEEEeccCCCCCCC---C-CHHHHHHHHHHHHHhCCCcc
Confidence 887443211 123333332 688887522365555542211 11111 1 11256788889999999876
Q ss_pred C---C-CCCceeeeeeeeccCCCCeEEecCCC-------------------------------CCCCCEEEEeCCCcccc
Q 015072 315 D---S-SGPAATQLCMYSMTPDKDFVIDFLGG-------------------------------ELGEDVVVAGGFSGHGF 359 (413)
Q Consensus 315 ~---~-~~~~~~~~g~~~~t~d~~p~ig~~~~-------------------------------~~~~~~~~~~G~~~~G~ 359 (413)
. . ..+...|+|+||+|+|++|+||++|. . +|+|+++||||+|+
T Consensus 555 ~~~~~~~~~~~~w~G~R~~t~D~lPiiG~~p~~~~~~~~y~~l~~~~~~~~~~~~~~~~~~~~~--~~l~~a~G~g~~Gl 632 (689)
T 3pvc_A 555 WPQQVDVSDNQARCGVRCAIRDHLPMVGAVPDYAATLAQYQDLSRRIQHGGESEVNDIAVAPVW--PELFMVGGLGSRGL 632 (689)
T ss_dssp GGGGCCCTTCCEEEEEEEECTTSCCEEEEEECHHHHHHHSTTHHHHC--------CCCCCCCEE--EEEEEEECCTTCHH
T ss_pred ccccccccccceeEEEeeecCCCCcccCcCCCHHHHHHHHHhhhccccccccccccccccCCCC--CChHHhhcccccHH
Confidence 1 1 13578999999999999999999885 4 89999999999999
Q ss_pred ccchHHHHHHHHHHHcCCCCccc---cccccccccCCCCCCCccccc
Q 015072 360 KMAPVVGRILADLVLSGEAQGVE---LRHFRIARFKENPKGNVKDYE 403 (413)
Q Consensus 360 ~~a~~~a~~~a~~i~~~~~~~~~---~~~~~~~R~~~~~~~~~~~~~ 403 (413)
++||++|++||++|+ |++.+.+ ++.|+|+||..+++.+.++..
T Consensus 633 ~~ap~~ae~lA~~i~-g~~~p~~~~~l~~~~p~Rf~~r~l~~~~~~~ 678 (689)
T 3pvc_A 633 CSAPLVAEILAAQMF-GEPLPLDAKTLAALNPNRFWIRKLLKGRPVQ 678 (689)
T ss_dssp HHHHHHHHHHHHHHT-TCCCSSCHHHHHTTCTTHHHHHHHTTC----
T ss_pred HHHHHHHHHHHHHHc-CCCCCCCHHHHhhcChhHHHHHHHhcCCccc
Confidence 999999999999998 6665666 899999999998887777774
No 11
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=100.00 E-value=9.7e-41 Score=311.71 Aligned_cols=355 Identities=19% Similarity=0.237 Sum_probs=260.1
Q ss_pred CCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCCCCcceecccC---CccccchHHHHHHHHHHHHHhc
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESRTIRATYP---EDYYHPMVLESSLLWEQAQSEI 82 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~~~~~~s~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 82 (413)
.++||+|||||++|+++|++|+++|++|+|||+...++ +++..+.|.+..... ......+...+.+.|.++.+.+
T Consensus 16 ~~~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~~~~--g~s~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 93 (382)
T 1ryi_A 16 RHYEAVVIGGGIIGSAIAYYLAKENKNTALFESGTMGG--RTTSAAAGMLGAHAECEERDAFFDFAMHSQRLYKGLGEEL 93 (382)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTT--THHHHCCCBCCGGGSCSSCSHHHHHHHHHHHHTTTHHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCc--ccchhcCceeccCccCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 46899999999999999999999999999999987653 455556666655443 2234556666777776554433
Q ss_pred ----CCee-EeeeeeeeeCCCChHHHHHHHHHHHhCCCCccccCHHHHHHhcCCcccCCCCeEEEEecCCeeecHHHHHH
Q 015072 83 ----GYKV-YFKAHQFDMGPSENKSLRSVIASCRKNSVPHQVLDCRQVLQKYSGRIEIPENWVGVTTELGGVIKPTKAVS 157 (413)
Q Consensus 83 ----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
+.++ +...+.+.+... ......+....+ . ...++++.+++...+|. +. .....+++.+.++.+++..+++
T Consensus 94 ~~~~~~~~~~~~~g~l~~~~~-~~~~~~~~~~~~-~-~~~~~l~~~~~~~~~p~-~~-~~~~~~~~~~~~~~~~~~~~~~ 168 (382)
T 1ryi_A 94 YALSGVDIRQHNGGMFKLAFS-EEDVLQLRQMDD-L-DSVSWYSKEEVLEKEPY-AS-GDIFGASFIQDDVHVEPYFVCK 168 (382)
T ss_dssp HHHHCCCCCCBCCCEEEEESS-HHHHHHHHTTTT-S-TTEEEEEHHHHHHHCTT-SC-TTCCEEEEETTCCBCCHHHHHH
T ss_pred HHhhCCCcCeeecceEEEEeC-HHHHHHHHHHhh-c-CCeEEECHHHHHHhCCC-CC-cccceEEEeCCCeEEcHHHHHH
Confidence 5554 334444444332 222222222222 1 45678888888888886 44 4456788888999999999999
Q ss_pred HHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcChhhhhhhhcCCCcceeEEEEEEEEE
Q 015072 158 MFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWVGKLVKKISGLELPIQAVETSVCYW 237 (413)
Q Consensus 158 ~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~~~l~~~~~g~~~p~~~~~~~~~~~ 237 (413)
.|.+.+++.|++++++++|++|.. + ++.+.|++.+| +++||.||+|+|.|+..+.+.+ +..+|+.+.+++++.+
T Consensus 169 ~l~~~~~~~g~~i~~~~~v~~i~~--~--~~~~~v~~~~g-~~~a~~vV~A~G~~s~~l~~~~-~~~~~~~~~~g~~~~~ 242 (382)
T 1ryi_A 169 AYVKAAKMLGAEIFEHTPVLHVER--D--GEALFIKTPSG-DVWANHVVVASGVWSGMFFKQL-GLNNAFLPVKGECLSV 242 (382)
T ss_dssp HHHHHHHHTTCEEETTCCCCEEEC--S--SSSEEEEETTE-EEEEEEEEECCGGGTHHHHHHT-TCCCCCEEEEEEEEEE
T ss_pred HHHHHHHHCCCEEEcCCcEEEEEE--E--CCEEEEEcCCc-eEEcCEEEECCChhHHHHHHhc-CCCCceeccceEEEEE
Confidence 999999999999999999999988 6 34567888777 5999999999999998888876 7788999999999887
Q ss_pred EecCCCccccccCCCCceEEecCCCeeEecCCCCCCCeEEEEeCCCC-cCCCCCCCCCCCcchHHHHHHHHhhcCCCCCC
Q 015072 238 RIKEGDEADYAVGGDFPSFASYGDPHVYGTPSLEYPGLIKIALHRGY-LCDPDRRPWGPGPLLDSLKELIQGRFAGRVDS 316 (413)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~ 316 (413)
+.+... + .... .. ...|++|..+ +.+.++..... ..+. ....+..+.+.+.+.+++|.+.+.
T Consensus 243 ~~~~~~---~----~~~~-~~---~~~~~~p~~~--g~~~vG~~~~~~~~~~----~~~~~~~~~l~~~~~~~~p~l~~~ 305 (382)
T 1ryi_A 243 WNDDIP---L----TKTL-YH---DHCYIVPRKS--GRLVVGATMKPGDWSE----TPDLGGLESVMKKAKTMLPAIQNM 305 (382)
T ss_dssp ECCSSC---C----CSEE-EE---TTEEEEECTT--SEEEEECCCEETCCCC----SCCHHHHHHHHHHHHHHCGGGGGS
T ss_pred CCCCCC---c----cceE-Ec---CCEEEEEcCC--CeEEEeecccccCCCC----CCCHHHHHHHHHHHHHhCCCcCCC
Confidence 643211 1 1122 22 2478888754 55555542211 1111 111226788999999999998753
Q ss_pred CCCceeeeeeeeccCCCCeEEecCCCCCCCCEEEEeCCCccccccchHHHHHHHHHHHcCCCCcccc-ccccccccCCC
Q 015072 317 SGPAATQLCMYSMTPDKDFVIDFLGGELGEDVVVAGGFSGHGFKMAPVVGRILADLVLSGEAQGVEL-RHFRIARFKEN 394 (413)
Q Consensus 317 ~~~~~~~~g~~~~t~d~~p~ig~~~~~~~~~~~~~~G~~~~G~~~a~~~a~~~a~~i~~~~~~~~~~-~~~~~~R~~~~ 394 (413)
.....|+|+|++++|+.|+||++|.. +|+|+++|++|+|+++||++|+++|++|+++.. +.++ +.|+|+||...
T Consensus 306 -~~~~~w~g~~~~t~d~~p~ig~~~~~--~~l~~~~G~~g~G~~~a~~~g~~la~~i~~~~~-~~~~~~~~~~~Rf~~~ 380 (382)
T 1ryi_A 306 -KVDRFWAGLRPGTKDGKPYIGRHPED--SRILFAAGHFRNGILLAPATGALISDLIMNKEV-NQDWLHAFRIDRKEAV 380 (382)
T ss_dssp -EEEEEEEEEEEECSSSCCEEEEETTE--EEEEEEECCSSCTTTTHHHHHHHHHHHHTTCCC-CHHHHHHTCSCCC---
T ss_pred -ceeeEEEEecccCCCCCcEeccCCCc--CCEEEEEcCCcchHHHhHHHHHHHHHHHhCCCC-CchhhcCCChhhcccC
Confidence 45678999999999999999999876 899999999999999999999999999995544 5567 99999999754
No 12
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=100.00 E-value=4.2e-38 Score=292.46 Aligned_cols=345 Identities=17% Similarity=0.149 Sum_probs=250.7
Q ss_pred CCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCCCCcceecccCCc---cccchHHHHHHHHHHHHHhc
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESRTIRATYPED---YYHPMVLESSLLWEQAQSEI 82 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~~~~~~s~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 82 (413)
+++||+|||||++|+++|++|+++|++|+|||+.+..+ .+++..+.+.++..+... ...++...+.+.|.++.+..
T Consensus 3 ~~~dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~~~~~-~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (369)
T 3dme_A 3 TDIDCIVIGAGVVGLAIARALAAGGHEVLVAEAAEGIG-TGTSSRNSEVIHAGIYYPADSLKARLCVRGKHLLYEYCAAR 81 (369)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSS-CSTTSSSCCEECCCCSSCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCC-CccCcCCccccccCccCCCCCHhHHHHHHHHHHHHHHHHHc
Confidence 46899999999999999999999999999999986443 355666666665543221 22456667778888888777
Q ss_pred CCeeEeeeeeeeeCCCC--hHHHHHHHHHHHhCCCC-ccccCHHHHHHhcCCcccCCCCeEEEEecCCeeecHHHHHHHH
Q 015072 83 GYKVYFKAHQFDMGPSE--NKSLRSVIASCRKNSVP-HQVLDCRQVLQKYSGRIEIPENWVGVTTELGGVIKPTKAVSMF 159 (413)
Q Consensus 83 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~-~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 159 (413)
+.. +...+.+...... ...+..........+++ .+.++..++...+|. + ....+.+.+..+.+++..+++.|
T Consensus 82 ~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~-~---~~~~~~~~~~~~~~~~~~~~~~l 156 (369)
T 3dme_A 82 GVP-HQRLGKLIVATSDAEASQLDSIARRAGANGVDDLQHIDGAAARRLEPA-L---HCTAALVSPSTGIVDSHALMLAY 156 (369)
T ss_dssp TCC-EECCCEEEEECSHHHHTTHHHHHHHHHHTTCCCCEEEEHHHHHHHCTT-C---CCSEEEEETTCEEECHHHHHHHH
T ss_pred CCC-cccCCEEEEecCHHHHHHHHHHHHHHHHcCCCceeecCHHHHHHhCCC-c---eeeeeeECCCCEEECHHHHHHHH
Confidence 766 3445555543322 23345566667778887 899999999998887 3 35678889999999999999999
Q ss_pred HHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeCCc--cEEEeCeEEEcCCcChhhhhhhhcCCC----cceeEEEEE
Q 015072 160 QTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSG--EEFWGKKCVVTAGAWVGKLVKKISGLE----LPIQAVETS 233 (413)
Q Consensus 160 ~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g--~~i~ad~vV~A~G~~~~~l~~~~~g~~----~p~~~~~~~ 233 (413)
.+.+++.|++++++++|++|.. +++ +.+.|.+.+| .+++||.||+|+|+|+..+++.+.|+. .++.|.+|+
T Consensus 157 ~~~~~~~Gv~i~~~~~v~~i~~--~~~-~~~~v~~~~g~~~~~~a~~VV~A~G~~s~~l~~~~~g~~~~~~~~i~p~rG~ 233 (369)
T 3dme_A 157 QGDAESDGAQLVFHTPLIAGRV--RPE-GGFELDFGGAEPMTLSCRVLINAAGLHAPGLARRIEGIPRDSIPPEYLCKGS 233 (369)
T ss_dssp HHHHHHTTCEEECSCCEEEEEE--CTT-SSEEEEECTTSCEEEEEEEEEECCGGGHHHHHHTEETSCGGGSCCCEEEEEE
T ss_pred HHHHHHCCCEEECCCEEEEEEE--cCC-ceEEEEECCCceeEEEeCEEEECCCcchHHHHHHhcCCCccccceeeecceE
Confidence 9999999999999999999998 632 3477888887 369999999999999998887663553 579999999
Q ss_pred EEEEEecCCCccccccCCCCceEEec--CCCeeEecCCCCCCCeEEEEeCCCCcCCCCCCCCCCCcchHHHHHHHHhhcC
Q 015072 234 VCYWRIKEGDEADYAVGGDFPSFASY--GDPHVYGTPSLEYPGLIKIALHRGYLCDPDRRPWGPGPLLDSLKELIQGRFA 311 (413)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p 311 (413)
++.++.+.... ...+... ....+++++..+ |.+.++.+.+...+ .... ...+.++.+.+.+.+++|
T Consensus 234 ~~~~~~~~~~~--------~~~~~~p~~~~~~~~~~~~~~--g~~~iG~t~e~~~~-~~~~-~~~~~~~~l~~~~~~~~P 301 (369)
T 3dme_A 234 YFTLAGRAPFS--------RLIYPVPQHAGLGVHLTLDLG--GQAKFGPDTEWIAT-EDYT-LDPRRADVFYAAVRSYWP 301 (369)
T ss_dssp EEECSSSCSCS--------SEEEECTTCSSCCCCEEECTT--SCEEECCCCEEESS-CCCC-CCGGGGGGHHHHHHTTCT
T ss_pred EEEECCCCccC--------ceeecCCCCCCceEEEeCccC--CcEEECCCcccccc-cccc-cCHHHHHHHHHHHHHHCC
Confidence 87665221110 1111111 111233333332 44544442221011 1111 112278889999999999
Q ss_pred CCCCCCCCceeeeeeeecc-----CCCCeEE-ec-CCCCCCCCEEEEeCCCccccccchHHHHHHHHHHH
Q 015072 312 GRVDSSGPAATQLCMYSMT-----PDKDFVI-DF-LGGELGEDVVVAGGFSGHGFKMAPVVGRILADLVL 374 (413)
Q Consensus 312 ~~~~~~~~~~~~~g~~~~t-----~d~~p~i-g~-~~~~~~~~~~~~~G~~~~G~~~a~~~a~~~a~~i~ 374 (413)
.+.+. .+...|+|+||.+ +|+.|+| |+ ++.. +|+|+++||+++|+++||++|+.++++|.
T Consensus 302 ~l~~~-~v~~~w~G~Rp~~~~~~~~d~~p~i~g~~~~~~--~~l~~~~G~~~~G~t~ap~~a~~~a~~i~ 368 (369)
T 3dme_A 302 ALPDG-ALAPGYTGIRPKISGPHEPAADFAIAGPASHGV--AGLVNLYGIESPGLTASLAIAEETLARLA 368 (369)
T ss_dssp TCCTT-CCEEEEEEEEEESSCTTSCCCCCEEECHHHHCC--TTEEEEECCCTTHHHHHHHHHHHHHHHHC
T ss_pred CCChh-hceecceeccccccCCCCCcCCeEEecccccCC--CCEEEEeCCCCchHhccHHHHHHHHHHhh
Confidence 99864 5678899999997 5789998 87 4666 99999999999999999999999999984
No 13
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=100.00 E-value=2.3e-38 Score=322.12 Aligned_cols=372 Identities=17% Similarity=0.178 Sum_probs=269.8
Q ss_pred CCccEEEECCCHHHHHHHHHHHHcCC-cEEEEcccCCCCCCCCCCCCCcceecccCCccccchHHHHHHHHHHHHHhcCC
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAKRGQ-KTLLLEQFDFLHHRGSSHGESRTIRATYPEDYYHPMVLESSLLWEQAQSEIGY 84 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~~g~-~V~lvE~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (413)
+++||+|||||++|+++|++|+++|+ +|+|||++...+..+++..+.|.+...........+...+.+.|.++.+ .+.
T Consensus 3 ~~~dVvIIGgGi~Gls~A~~La~~G~~~V~vlE~~~~~~~~gss~~~~G~~~~~~~~~~~~~l~~~s~~~~~~l~~-~~~ 81 (830)
T 1pj5_A 3 STPRIVIIGAGIVGTNLADELVTRGWNNITVLDQGPLNMPGGSTSHAPGLVFQTNPSKTMASFAKYTVEKLLSLTE-DGV 81 (830)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSCTTCCCSGGGTCCCEECCCCSCHHHHHHHHHHHHHHHHCEE-TTE
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEeCCCCCCCcccceeCCceeecCCCCHHHHHHHHHHHHHHHHHHh-hCC
Confidence 46899999999999999999999998 9999999886533344555556655444444445566677777777642 233
Q ss_pred eeEeeeeeeeeCCCC--hHHHHHHHHHHHhCCCCccccCHHHHHHhcCCcccCCCCeEEEEecCCeeecHHHHHHHHHHH
Q 015072 85 KVYFKAHQFDMGPSE--NKSLRSVIASCRKNSVPHQVLDCRQVLQKYSGRIEIPENWVGVTTELGGVIKPTKAVSMFQTL 162 (413)
Q Consensus 85 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 162 (413)
..+...+.+.+.... .+.+......+...|++.+.++.+++.+.+|. +.......+++.+.++.++|..+++.|.+.
T Consensus 82 ~~~~~~G~l~~~~~~~~~~~l~~~~~~~~~~G~~~~~l~~~e~~~~~p~-l~~~~~~gg~~~~~~g~v~p~~l~~~L~~~ 160 (830)
T 1pj5_A 82 SCFNQVGGLEVATTETRLADLKRKLGYAAAWGIEGRLLSPAECQELYPL-LDGENILGGLHVPSDGLASAARAVQLLIKR 160 (830)
T ss_dssp ESEECCCEEEEESSHHHHHHHHHHHHHHHHHTCCCEEECHHHHHHHCTT-SCGGGCCEEEEETTCEEECHHHHHHHHHHH
T ss_pred CCeeecCcEEEEeCHHHHHHHHHHHHHHHHcCCCeEEECHHHHHHhCcc-CCccceEEEEEECCCceEcHHHHHHHHHHH
Confidence 345556666554332 23344445566677888899999999999887 554456778999999999999999999999
Q ss_pred HHHcCCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcChhhhhhhhcCCCcceeEEEEEEEEEEecCC
Q 015072 163 AIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWVGKLVKKISGLELPIQAVETSVCYWRIKEG 242 (413)
Q Consensus 163 ~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~~~l~~~~~g~~~p~~~~~~~~~~~~~~~~ 242 (413)
+++.|++++++++|++|.. +++ ..+.|.+.+|+ ++||.||+|+|+|+..+.+.+ |..+|+.|.+++++.....+.
T Consensus 161 a~~~Gv~i~~~t~V~~i~~--~~~-~v~~V~t~~G~-i~Ad~VV~AaG~~s~~l~~~~-g~~~pl~p~~g~~~~~~~~~~ 235 (830)
T 1pj5_A 161 TESAGVTYRGSTTVTGIEQ--SGG-RVTGVQTADGV-IPADIVVSCAGFWGAKIGAMI-GMAVPLLPLAHQYVKTTPVPA 235 (830)
T ss_dssp HHHTTCEEECSCCEEEEEE--ETT-EEEEEEETTEE-EECSEEEECCGGGHHHHHHTT-TCCCCCEEEEEEEEEESCCGG
T ss_pred HHHcCCEEECCceEEEEEE--eCC-EEEEEEECCcE-EECCEEEECCccchHHHHHHh-CCCccceeceeEEEEEecCcc
Confidence 9999999999999999998 622 33467788884 999999999999998887766 888999999999887653221
Q ss_pred Ccc-cc-ccCCCCceEEecCCCeeEecCCCCCCCeEEEEeCCCC-cCCCCC---------------CCC-CCCcchHHHH
Q 015072 243 DEA-DY-AVGGDFPSFASYGDPHVYGTPSLEYPGLIKIALHRGY-LCDPDR---------------RPW-GPGPLLDSLK 303 (413)
Q Consensus 243 ~~~-~~-~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~~~-~~~~~~---------------~~~-~~~~~~~~l~ 303 (413)
... .. .....+|++... +..+|++|..+ +++.++..... ...+.. .+. ...+.++.+.
T Consensus 236 ~~~~~~~~~~~~~pv~~~~-~~~~y~r~~~~--~l~iG~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~l~ 312 (830)
T 1pj5_A 236 QQGRNDQPNGARLPILRHQ-DQDLYYREHGD--RYGIGSYAHRPMPVDVDTLGAYAPETVSEHHMPSRLDFTLEDFLPAW 312 (830)
T ss_dssp GTTTSCTTTCCCSCEEEEG-GGTEEEEEETT--EEEEEECCSCCCBCCGGGSCCCCGGGCBTTBSTTEECCCHHHHHHHH
T ss_pred cccccccccCCCCCeEEcC-CCCEEEEEeCC--eEEEeccCCCCcccCcccccccccccccccccccccCCCHHHHHHHH
Confidence 110 00 001235555432 23478887643 44444332110 001000 000 1112567888
Q ss_pred HHHHhhcCCCCCCCCCceeeeeeeeccCCCCeEEecCCCCCCCCEEEEeCCCccccccchHHHHHHHHHHHcCCCCcccc
Q 015072 304 ELIQGRFAGRVDSSGPAATQLCMYSMTPDKDFVIDFLGGELGEDVVVAGGFSGHGFKMAPVVGRILADLVLSGEAQGVEL 383 (413)
Q Consensus 304 ~~~~~~~p~~~~~~~~~~~~~g~~~~t~d~~p~ig~~~~~~~~~~~~~~G~~~~G~~~a~~~a~~~a~~i~~~~~~~~~~ 383 (413)
+.+.+++|.+.+. .+...|+|+|++|+|+.|+||++|.. +|+|+++|+ |+++||++|+++|++|+++.+ +.++
T Consensus 313 ~~~~~~~P~l~~~-~i~~~w~G~r~~t~D~~PiIG~~p~~--~gl~va~G~---G~~~ap~~g~~la~li~~~~~-~~dl 385 (830)
T 1pj5_A 313 EATKQLLPALADS-EIEDGFNGIFSFTPDGGPLLGESKEL--DGFYVAEAV---WVTHSAGVAKAMAELLTTGRS-ETDL 385 (830)
T ss_dssp HHHHHHCGGGGGS-CEEEEEEEEEEECTTSCCEEEECSSS--BTEEEEESC---CGGGHHHHHHHHHHHHHHSSC-SSCC
T ss_pred HHHHHhCcccccc-CcceEEEeecccCCCCCeeeccCCCC--CCEEEEECc---hHHhhHHHHHHHHHHHhCCCC-Cccc
Confidence 8999999998863 56789999999999999999999987 999999987 799999999999999996655 5678
Q ss_pred ccccccccCCC
Q 015072 384 RHFRIARFKEN 394 (413)
Q Consensus 384 ~~~~~~R~~~~ 394 (413)
+.|+|.||...
T Consensus 386 ~~~~~~Rf~~~ 396 (830)
T 1pj5_A 386 GECDITRFEDV 396 (830)
T ss_dssp TTTBGGGCCGG
T ss_pred cccChhhhccc
Confidence 99999999764
No 14
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=100.00 E-value=4.6e-36 Score=276.59 Aligned_cols=312 Identities=10% Similarity=-0.002 Sum_probs=218.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHcC------CcEEEEcccCCCCCCCCCCCCCcceecccCCcccc---chHHHHHHHHHHH
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKRG------QKTLLLEQFDFLHHRGSSHGESRTIRATYPEDYYH---PMVLESSLLWEQA 78 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~g------~~V~lvE~~~~~~~~~~s~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 78 (413)
+||+|||||++|+++|++|+++| ++|+|||+....+ ++|..++|.+.......... .+...+.+.|.++
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~~~--~aS~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFTPL--TTTDVAAGLWQPYLSDPNNPQEADWSQQTFDYLLSH 78 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCGGG--SGGGTCCCBCCCCSSCCSCTHHHHHHHHHHHHHHTT
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCCCC--CccccCcceeecccCCCchHHHHHHHHHHHHHHHHH
Confidence 48999999999999999999998 9999999987653 56666677766533322222 3333444444443
Q ss_pred HHhc---CCeeEeeeeeeeeCCCChHHHHHHHHHHHhCCCCccccCHHHHHHhcCCcccCCCCeEEEEecCCeeecHHHH
Q 015072 79 QSEI---GYKVYFKAHQFDMGPSENKSLRSVIASCRKNSVPHQVLDCRQVLQKYSGRIEIPENWVGVTTELGGVIKPTKA 155 (413)
Q Consensus 79 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (413)
.... ...+....+.+....... ...+.+.+.+++.++.+++ ..+|. ...+++.+ ++.++|..+
T Consensus 79 ~~~~~~~~~~~~~~~g~~~~~~~~~------~~~~~~~~~~~~~l~~~e~-~~~p~------~~~~~~~~-~~~v~p~~~ 144 (351)
T 3g3e_A 79 VHSPNAENLGLFLISGYNLFHEAIP------DPSWKDTVLGFRKLTPREL-DMFPD------YGYGWFHT-SLILEGKNY 144 (351)
T ss_dssp TTSTTHHHHTEEEEEEEEEESSCCC------CCGGGGTSEEEEECCHHHH-TTCTT------CCEEEEEE-EEEECHHHH
T ss_pred hhccCCCCccEEEEEEEEEecCCcc------ccCHHHhCCCceECCHHHh-ccCCC------CceEEEec-ceEEcHHHH
Confidence 3322 112223444444332221 1233456677788998887 44453 34566666 599999999
Q ss_pred HHHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcChhhhhhhhcCCCcceeEEEEEEE
Q 015072 156 VSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWVGKLVKKISGLELPIQAVETSVC 235 (413)
Q Consensus 156 ~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~~~l~~~~~g~~~p~~~~~~~~~ 235 (413)
++.|.+.+++.|++++. ++|+++.. . . . ++||.||+|+|+|+..+++. .|+.|.+++++
T Consensus 145 ~~~l~~~~~~~Gv~i~~-~~V~~i~~--~---~---------~-~~a~~VV~A~G~~s~~l~~~-----~~l~p~rg~~~ 203 (351)
T 3g3e_A 145 LQWLTERLTERGVKFFQ-RKVESFEE--V---A---------R-EGADVIVNCTGVWAGALQRD-----PLLQPGRGQIM 203 (351)
T ss_dssp HHHHHHHHHHTTCEEEE-CCCCCHHH--H---H---------H-TTCSEEEECCGGGGGGTSCC-----TTCEEEEEEEE
T ss_pred HHHHHHHHHHCCCEEEE-EEeCCHHH--h---h---------c-CCCCEEEECCCcChHhhcCC-----CceeecCCcEE
Confidence 99999999999999987 88887765 4 1 1 56999999999999887653 69999999999
Q ss_pred EEEecCCCccccccCCCCceEEe----cCCCeeEecCCCCCCCeEEEEeCCCCcCCCCCCCCCCCcchHHHHHHHHhhcC
Q 015072 236 YWRIKEGDEADYAVGGDFPSFAS----YGDPHVYGTPSLEYPGLIKIALHRGYLCDPDRRPWGPGPLLDSLKELIQGRFA 311 (413)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p 311 (413)
.++.+. . ..+.+.. ..+..+|++|..+ +++.+++......++. ...+..+.+.+.+.+++|
T Consensus 204 ~~~~~~-~--------~~~~~~~~~~~~~~~~~y~~p~~~--~~~iGg~~~~~~~~~~----~~~~~~~~l~~~~~~~~P 268 (351)
T 3g3e_A 204 KVDAPW-M--------KHFILTHDPERGIYNSPYIIPGTQ--TVTLGGIFQLGNWSEL----NNIQDHNTIWEGCCRLEP 268 (351)
T ss_dssp EEECTT-C--------CSEEEECCTTTCTTCSCEEEECSS--CEEEECCCEETCCCCS----CCHHHHHHHHHHHHHHCG
T ss_pred EEeCCC-c--------ceEEEeccccCCCCceeEEEeCCC--cEEEeeeeecCCCCCC----CCHHHHHHHHHHHHHhCC
Confidence 887421 1 1222221 1234589998864 5555544221111111 112278899999999999
Q ss_pred CCCCCCCCceeeeeeeeccCCCCeE----EecCCCCCCCCEEEEeCCCccccccchHHHHHHHHHHHc
Q 015072 312 GRVDSSGPAATQLCMYSMTPDKDFV----IDFLGGELGEDVVVAGGFSGHGFKMAPVVGRILADLVLS 375 (413)
Q Consensus 312 ~~~~~~~~~~~~~g~~~~t~d~~p~----ig~~~~~~~~~~~~~~G~~~~G~~~a~~~a~~~a~~i~~ 375 (413)
.+.+. .+...|+|+||+|+| .|+ ||++|.. +|+|+++||+|+|+++||++|+++|++|.+
T Consensus 269 ~l~~~-~i~~~w~G~r~~t~D-~p~~~~~ig~~~~~--~~~~~~~G~~g~G~~~ap~~g~~la~li~~ 332 (351)
T 3g3e_A 269 TLKNA-RIIGERTGFRPVRPQ-IRLEREQLRTGPSN--TEVIHNYGHGGYGLTIHWGCALEAAKLFGR 332 (351)
T ss_dssp GGGGC-EEEEEEEEEEEECSS-CEEEEEEECCSSSC--EEEEEEECCTTCHHHHHHHHHHHHHHHHHH
T ss_pred CccCC-cEeeeeEeeCCCCCC-ccceeeeccCCCCC--CeEEEEeCCCcchHhhhHHHHHHHHHHHHH
Confidence 98763 567899999999999 885 7777766 899999999999999999999999999983
No 15
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=100.00 E-value=2.7e-35 Score=276.21 Aligned_cols=326 Identities=17% Similarity=0.123 Sum_probs=218.2
Q ss_pred CCccEEEECCCHHHHHHHHHHHHc--CCcEEEEcccCCCCCCCCCCCCCc-ce--ecccCCccccchHHHHHHHHHHHHH
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAKR--GQKTLLLEQFDFLHHRGSSHGESR-TI--RATYPEDYYHPMVLESSLLWEQAQS 80 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~~--g~~V~lvE~~~~~~~~~~s~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (413)
.++||+|||||++|+++|++|+++ |++|+|||+....+ +++..+.+ .+ ...+... ...+...+.+.|.+
T Consensus 35 ~~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~~--~~s~~~~g~~i~~~~~~~~~-~~~l~~~~~~~~~~--- 108 (405)
T 3c4n_A 35 EAFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLPN--EEGATILAPGVWTAQDIPAG-QEAQAEWTREQLLG--- 108 (405)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSSC--TTSHHHHCCCEECGGGCCTT-CHHHHHHHHHHHHT---
T ss_pred CcCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCCC--cchhccCCcceeecccCCch-HHHHHHHHHHHHHH---
Confidence 358999999999999999999999 99999999986653 33333333 22 2222222 45566666666665
Q ss_pred hcCC--ee-EeeeeeeeeCCCChHHHHHHHHHHHhCCCCccccCHHHHHHhcCCcccC----CCCeEEEEecCCeeecHH
Q 015072 81 EIGY--KV-YFKAHQFDMGPSENKSLRSVIASCRKNSVPHQVLDCRQVLQKYSGRIEI----PENWVGVTTELGGVIKPT 153 (413)
Q Consensus 81 ~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~----~~~~~~~~~~~~~~~~~~ 153 (413)
..+. +. +...+.+..... ....+ .++..++...+|. +.. .....+++.+..+++++.
T Consensus 109 ~~~~~~~~~~~~~g~l~~~~~-----------~~~~g----~l~~~~~~~~~p~-~~~~~~~~~~~~~~~~~~~g~v~~~ 172 (405)
T 3c4n_A 109 ALGSGKTLEVEDRPLLHLLPA-----------GEGSG----LTPTLDALADFPE-ALALLDPARLPVARVDPRALTYRPG 172 (405)
T ss_dssp GGGSSCCCCEEECCEEEEESS-----------CCSSS----CEEHHHHTTTCHH-HHTTSCTTTSCEEEEETTCEEECHH
T ss_pred HhCCCCCCcEEeeCeEEehhh-----------HhHCC----CCCHHHHHHhCCC-ccccccCCcceEEEEcCCCEEEcHH
Confidence 3333 22 334444332110 01111 3445554444443 221 456778899999999999
Q ss_pred HHHHHHHHHHHHcCCeEecCceEE---------EEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcChhhhhh-hhcCC
Q 015072 154 KAVSMFQTLAIKNGAVLRDNTEVK---------TVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWVGKLVK-KISGL 223 (413)
Q Consensus 154 ~~~~~l~~~~~~~gv~i~~~~~V~---------~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~~~l~~-~~~g~ 223 (413)
.+++.|.+.+++.|++++++++|+ +|.. + ++.+.|++.+| +++||.||+|+|+|+..+++ .+ +.
T Consensus 173 ~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~--~--~~~v~v~~~~g-~i~a~~VV~A~G~~s~~l~~~~~-g~ 246 (405)
T 3c4n_A 173 SLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTV--T--NTHQIVVHETR-QIRAGVIIVAAGAAGPALVEQGL-GL 246 (405)
T ss_dssp HHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC-----------CBCCE-EEEEEEEEECCGGGHHHHHHHHH-CC
T ss_pred HHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEe--e--CCeEEEEECCc-EEECCEEEECCCccHHHHHHHhc-CC
Confidence 999999999999999999999999 8877 5 34457777777 59999999999999988888 66 88
Q ss_pred CcceeEEEEEEEEEEecCCCccccccCCCCceEEecCCCeeEecCCCCCCCeEEEEeCCC---CcCCCC-----CC-CCC
Q 015072 224 ELPIQAVETSVCYWRIKEGDEADYAVGGDFPSFASYGDPHVYGTPSLEYPGLIKIALHRG---YLCDPD-----RR-PWG 294 (413)
Q Consensus 224 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~~---~~~~~~-----~~-~~~ 294 (413)
.+|+.+.+++++.++.+.. .. .+.+. ...+|++|..+ |.++++.... ...++. .. ...
T Consensus 247 ~~~~~~~~g~~~~~~~~~~----~~----~~~~~---~~~~y~~p~~~--g~~~~G~t~~~~~~~~~~~~~~~~~~~~~~ 313 (405)
T 3c4n_A 247 HTRHGRAYRQFPRLDLLSG----AQ----TPVLR---ASGLTLRPQNG--GYTLVPAIHHRDPHGYHPAGGSLTGVPTGL 313 (405)
T ss_dssp CCCCEEEEEECCEECSCCC----TT----CCEEE---ETTEEEEEETT--EEEEECCCCSCBCSSCCCCCCCBTTBCCSS
T ss_pred CCCcccceeEEEEECCCCc----cC----CCeEE---CCcEEEEEcCC--CeEEEeccccccccCcCcccccccccccCC
Confidence 8899999999876652211 10 12222 23488888754 5555544211 111111 00 011
Q ss_pred CCcchHHHHHHHHhhcCCCCCCC--------CCceeeeeeeeccCCCCeEEecCCCCCCCCEEEEeCCCccccccchHHH
Q 015072 295 PGPLLDSLKELIQGRFAGRVDSS--------GPAATQLCMYSMTPDKDFVIDFLGGELGEDVVVAGGFSGHGFKMAPVVG 366 (413)
Q Consensus 295 ~~~~~~~l~~~~~~~~p~~~~~~--------~~~~~~~g~~~~t~d~~p~ig~~~~~~~~~~~~~~G~~~~G~~~a~~~a 366 (413)
..+.++.+.+.+ ++||.+.+.. .+...|+|+||+|+|+.|+||+++ +|+|+++||+|+ +++||++|
T Consensus 314 ~~~~~~~l~~~~-~~~P~l~~~~~~~~r~~~~i~~~w~G~r~~t~D~~P~ig~~~----~gl~~a~G~~g~-~~~ap~~a 387 (405)
T 3c4n_A 314 RRELLEDLVGLM-DAVPALAGEGLELGRSSADVPGAWLALPGGRPDAPPQAEELA----PGLHLLLGGPLA-DTLGLAAA 387 (405)
T ss_dssp CHHHHHHHHHHT-TTCGGGGSSCBCCCSSGGGSCEEEEEEGGGCTTCCCEEEEEE----TTEEEEECCTTH-HHHHHHHH
T ss_pred CHHHHHHHHHHH-HhCCCccccCccccccccceeeEEEeecCcCCCCCCEecccC----CCeEEEEccCcH-HHHHHHHH
Confidence 112455555443 8999887631 166799999999999999999987 799999999886 49999999
Q ss_pred HHHHHHHHcCCC
Q 015072 367 RILADLVLSGEA 378 (413)
Q Consensus 367 ~~~a~~i~~~~~ 378 (413)
+++|++|+++..
T Consensus 388 ~~la~~i~~~~~ 399 (405)
T 3c4n_A 388 HELAQRVSASLE 399 (405)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHhCchh
Confidence 999999985443
No 16
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=100.00 E-value=9.9e-34 Score=262.20 Aligned_cols=319 Identities=13% Similarity=0.008 Sum_probs=212.4
Q ss_pred CCCCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCC---CCCCCCcceeccc---CCccccchHHHHHHHHHH
Q 015072 4 SGENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRG---SSHGESRTIRATY---PEDYYHPMVLESSLLWEQ 77 (413)
Q Consensus 4 ~~~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~~~~~---~s~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 77 (413)
|.+++||+|||||++|+++|++|+++|++|+|||+...+.+.. ++....+.+.... ......++...+.+.|.+
T Consensus 3 m~~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~~~g~s~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (363)
T 1c0p_A 3 MHSQKRVVVLGSGVIGLSSALILARKGYSVHILARDLPEDVSSQTFASPWAGANWTPFMTLTDGPRQAKWEESTFKKWVE 82 (363)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCTTCTTCTTSSGGGCCCBCCCCSCTTTCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCCCCcCCcCcccCcccccccCcccCCCchHHHHHHHHHHHHHHH
Confidence 4567999999999999999999999999999999987654211 1222233333221 122334555566666776
Q ss_pred HHHh-cCCeeEeeeeeeeeCCCChHHHHHHHHHHHhCCCCccccCHHHHHHhcCCcccCCCCeEEEEecCCeeecHHHHH
Q 015072 78 AQSE-IGYKVYFKAHQFDMGPSENKSLRSVIASCRKNSVPHQVLDCRQVLQKYSGRIEIPENWVGVTTELGGVIKPTKAV 156 (413)
Q Consensus 78 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (413)
+... .++.. .+.+.+...+.. .....++..+.+++.++.+++ |. ...+++. .+++++|..++
T Consensus 83 ~~~~~~g~~~---~~~~~~~~~~~~---~~~~~~~~~g~~~~~l~~~~~----p~------~~~g~~~-~~~~v~p~~~~ 145 (363)
T 1c0p_A 83 LVPTGHAMWL---KGTRRFAQNEDG---LLGHWYKDITPNYRPLPSSEC----PP------GAIGVTY-DTLSVHAPKYC 145 (363)
T ss_dssp HTTTTSSEEE---EEEEEEESSGGG---GGGGTTTTTSTTCEECCGGGS----ST------TCEEEEE-EEEECCHHHHH
T ss_pred hCcccCCeEE---ECCEEEEecCcc---chhHHHHHhCCCcEECCHHHC----CC------ceEEEEE-ecceecHHHHH
Confidence 6444 44332 222322222211 112233445666677776543 22 2245555 77899999999
Q ss_pred HHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcChhhhhhhhcCCCcceeEEEEEEEE
Q 015072 157 SMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWVGKLVKKISGLELPIQAVETSVCY 236 (413)
Q Consensus 157 ~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~~~l~~~~~g~~~p~~~~~~~~~~ 236 (413)
+.|.+.+++.|++++. ++|++|.. + . + +||.||+|+|+|+..+... ...|+.|.+++++.
T Consensus 146 ~~l~~~~~~~G~~i~~-~~v~~l~~--~--------~-----~-~a~~VV~A~G~~s~~l~~~---~~~~~~p~rg~~~~ 205 (363)
T 1c0p_A 146 QYLARELQKLGATFER-RTVTSLEQ--A--------F-----D-GADLVVNATGLGAKSIAGI---DDQAAEPIRGQTVL 205 (363)
T ss_dssp HHHHHHHHHTTCEEEE-CCCSBGGG--T--------C-----S-SCSEEEECCGGGGGTSBTT---CCTTEEEEEEEEEE
T ss_pred HHHHHHHHHCCCEEEE-EEcccHhh--c--------C-----c-CCCEEEECCCcchhhccCc---ccCCccccCCeEEE
Confidence 9999999999999997 88887755 2 0 1 6999999999999877653 35799999999988
Q ss_pred EEecCCCccccccCCCCceEEec-CCCeeEecCCCCCCCeEEEEeCCCCcCCCCCCCCCCCcchHHHHHHHHhhcCCCCC
Q 015072 237 WRIKEGDEADYAVGGDFPSFASY-GDPHVYGTPSLEYPGLIKIALHRGYLCDPDRRPWGPGPLLDSLKELIQGRFAGRVD 315 (413)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~ 315 (413)
++.+.. ++.+... .....|++|..+ |.+.++.+..... .......+..+.+.+.+.+++|.+..
T Consensus 206 ~~~~~~----------~~~~~~~~~~~~~y~~p~~~--g~~~iG~t~~~~~---~~~~~~~~~~~~l~~~~~~~~P~l~~ 270 (363)
T 1c0p_A 206 VKSPCK----------RCTMDSSDPASPAYIIPRPG--GEVICGGTYGVGD---WDLSVNPETVQRILKHCLRLDPTISS 270 (363)
T ss_dssp EECCCC----------CCEEECSCTTCCEEEEEETT--TEEEEECCCEETC---CCCSCCHHHHHHHHHHHHHHCGGGSS
T ss_pred EeCCcc----------cceEeeccCCCcEEEEEcCC--CEEEEEeeeccCC---CCCCCCHHHHHHHHHHHHHhCccccC
Confidence 874331 1111111 112378888753 5555554321111 01111122678899999999998832
Q ss_pred -----CCCCceeeeeeeeccCCCCeEEecC-C-------C----------CC-C--CCEEEEeCCCccccccchHHHHHH
Q 015072 316 -----SSGPAATQLCMYSMTPDKDFVIDFL-G-------G----------EL-G--EDVVVAGGFSGHGFKMAPVVGRIL 369 (413)
Q Consensus 316 -----~~~~~~~~~g~~~~t~d~~p~ig~~-~-------~----------~~-~--~~~~~~~G~~~~G~~~a~~~a~~~ 369 (413)
...+...|+|+||+|+|+.|++|++ + . .+ . +|+|+++||+|+|+++||++|+++
T Consensus 271 ~~~~~~~~i~~~w~G~rp~t~d~~piig~~~~~~~~~~~~~~d~~~~~g~~p~~~~~~~~~a~G~~g~G~~~a~~~g~~~ 350 (363)
T 1c0p_A 271 DGTIEGIEVLRHNVGLRPARRGGPRVEAERIVLPLDRTKSPLSLGRGSARAAKEKEVTLVHAYGFSSAGYQQSWGAAEDV 350 (363)
T ss_dssp SSSGGGCEEEEEEEEEEEEETTSCEEEEEEEEESCCTTTCTTCSSCTTCCCSCCEEEEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CcccccceEeeceEEECCCCCCCceeEEEecccccccccCccccccccccccccccceEEEecCCCCcchheeccHHHHH
Confidence 0246789999999999999999873 1 0 00 1 589999999999999999999999
Q ss_pred HHHHH
Q 015072 370 ADLVL 374 (413)
Q Consensus 370 a~~i~ 374 (413)
|++|.
T Consensus 351 a~li~ 355 (363)
T 1c0p_A 351 AQLVD 355 (363)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99997
No 17
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.98 E-value=8.6e-30 Score=244.89 Aligned_cols=344 Identities=15% Similarity=0.111 Sum_probs=224.7
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCCCCcceecccC--CccccchHHHHHHHHHHHHHhcCC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESRTIRATYP--EDYYHPMVLESSLLWEQAQSEIGY 84 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~~~~~~s~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 84 (413)
++||+|||||++|+++|+.|+++|++|+|||+.+.. .++|..+.+.++.... ......+..++...+..+.+...
T Consensus 3 ~~DVvIIGgGi~G~~~A~~La~~G~~V~llE~~~~~--~gtS~~s~gli~~g~~~~~~~~~~l~~~~~~~~~~l~~~~~- 79 (501)
T 2qcu_A 3 TKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQDLA--CATSSASSKLIHGGLRYLEHYEFRLVSEALAEREVLLKMAP- 79 (501)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTT--CSGGGSSCCEECCCGGGGGGTCHHHHHHHHHHHHHHHHHCT-
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCEEEEECCCCC--CCccccccccccccchhhhhchHHHHHHHHHHHHHHHHhCC-
Confidence 589999999999999999999999999999998765 3566666677664321 12234555666666666554322
Q ss_pred eeEeeeeeeeeCCCC---hHHHHHHHHHHHhCCCCccccCHHHHHHhc--CCcccCCCCeEEEEecCCeeecHHHHHHHH
Q 015072 85 KVYFKAHQFDMGPSE---NKSLRSVIASCRKNSVPHQVLDCRQVLQKY--SGRIEIPENWVGVTTELGGVIKPTKAVSMF 159 (413)
Q Consensus 85 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~--p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 159 (413)
.+....+.+...... ..............+ ..++++.+++.+.+ |. +.. ....+++. .+++++|.+++..+
T Consensus 80 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~P~-l~~-~~~~~~~~-~~g~v~~~~l~~~l 155 (501)
T 2qcu_A 80 HIAFPMRFRLPHRPHLRPAWMIRIGLFMYDHLG-KRTSLPGSTGLRFGANSV-LKP-EIKRGFEY-SDCWVDDARLVLAN 155 (501)
T ss_dssp TTEEEEEEEEECCTTTSCHHHHHHHHHHHHSSS-CCSSSCCCEEEECCTTSS-BCT-TCCEEEEE-EEEEECHHHHHHHH
T ss_pred ccccccCeEeccCcccchHHHHHHHHHHHHhcC-CcEEECHHHHHHhhcCCC-cch-hceEEEEe-eCCEEcHHHHHHHH
Confidence 222222222221111 111122222222222 45677766655556 65 332 23344444 57889999999999
Q ss_pred HHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEe---CCcc--EEEeCeEEEcCCcChhhhhhh-hcCC-CcceeEEEE
Q 015072 160 QTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVT---SSGE--EFWGKKCVVTAGAWVGKLVKK-ISGL-ELPIQAVET 232 (413)
Q Consensus 160 ~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~---~~g~--~i~ad~vV~A~G~~~~~l~~~-~~g~-~~p~~~~~~ 232 (413)
.+.+.+.|++++++++|+++.. + ++.+.|++ .+|+ +++||.||+|+|+|+..+.+. +.+. ..|+.|.+|
T Consensus 156 ~~~a~~~Gv~i~~~~~V~~l~~--~--~~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~~l~~~~l~~~~~~~i~p~rG 231 (501)
T 2qcu_A 156 AQMVVRKGGEVLTRTRATSARR--E--NGLWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFDDGMHLPSPYGIRLIKG 231 (501)
T ss_dssp HHHHHHTTCEEECSEEEEEEEE--E--TTEEEEEEEETTTCCEEEEEESCEEECCGGGHHHHHHHHTCCCCSSCBCCEEE
T ss_pred HHHHHHcCCEEEcCcEEEEEEE--e--CCEEEEEEEECCCCCEEEEECCEEEECCChhHHHHHHHhccCCccccccccee
Confidence 9999999999999999999998 7 34566665 3564 699999999999999988775 4222 368999999
Q ss_pred EEEEEEecCCCccccccCCCCceEEe-cCCCeeEecCCCCCCCeEEEEeCCC-CcCCCCCCCCCCCcchHHHHHHHHhhc
Q 015072 233 SVCYWRIKEGDEADYAVGGDFPSFAS-YGDPHVYGTPSLEYPGLIKIALHRG-YLCDPDRRPWGPGPLLDSLKELIQGRF 310 (413)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~ 310 (413)
+++.++ .... ...+.+.. ...+.+|++|..+ |.+.+|.+.. ...++.... ...+..+.+.+.+.++|
T Consensus 232 ~~~~~~--~~~~------~~~~~~~~~~dg~~~~~~P~~~--g~~~iG~t~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~ 300 (501)
T 2qcu_A 232 SHIVVP--RVHT------QKQAYILQNEDKRIVFVIPWMD--EFSIIGTTDVEYKGDPKAVK-IEESEINYLLNVYNTHF 300 (501)
T ss_dssp EEEEEE--CSSS------CSCEEEEECTTSCEEEEEEETT--TEEEEECCCEECCSCGGGCC-CCHHHHHHHHHHHHHHB
T ss_pred EEEEEC--CCCC------CceEEEeecCCCCEEEEEEcCC--CcEEEcCCCCCCCCCcCCCC-CCHHHHHHHHHHHHHhc
Confidence 988776 2111 11222332 2345689999754 5555554321 111111111 11227889999999999
Q ss_pred C-CCCCCCCCceeeeeeeeccCCCCeEEecCCCC---------CCCCEEEEeCCCccccccchHHHHHHHHHHHcC
Q 015072 311 A-GRVDSSGPAATQLCMYSMTPDKDFVIDFLGGE---------LGEDVVVAGGFSGHGFKMAPVVGRILADLVLSG 376 (413)
Q Consensus 311 p-~~~~~~~~~~~~~g~~~~t~d~~p~ig~~~~~---------~~~~~~~~~G~~~~G~~~a~~~a~~~a~~i~~~ 376 (413)
| .+.+. .++..|+|+||.++|+.|+++.++.. ..++++.++ |.|++.++.+|+.+++++++.
T Consensus 301 p~~l~~~-~v~~~~aG~Rp~~~d~~p~~~~~~~~~~i~~~~~~~~~gl~~i~---Gg~~t~~~~~Ae~~~~~~~~~ 372 (501)
T 2qcu_A 301 KKQLSRD-DIVWTYSGVRPLCDDESDSPQAITRDYTLDIHDENGKAPLLSVF---GGKLTTYRKLAEHALEKLTPY 372 (501)
T ss_dssp SSCCCGG-GCCEEEEEEECCBCCCCSSGGGSCCCCEEEEEEETTEEEEEEEE---CCCGGGHHHHHHHHHHHHGGG
T ss_pred CCCCCcc-cEEEEEEEEeeecCCCCCccccCcCceEEEecccCCCCCeEEEe---CccccchHHHHHHHHHHHHHh
Confidence 9 67653 56789999999999999988877531 002233333 337999999999999999843
No 18
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.97 E-value=3.5e-29 Score=243.35 Aligned_cols=342 Identities=15% Similarity=0.101 Sum_probs=221.5
Q ss_pred CCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCCCCcceecccC--CccccchHHHHHHHHHHHHHhcC
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESRTIRATYP--EDYYHPMVLESSLLWEQAQSEIG 83 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~~~~~~s~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 83 (413)
.++||+|||||++|+++|+.|+++|++|+|||+++..+ ++|..+.+.++.... ......+..++...+..+... .
T Consensus 31 ~~~DVvVIGgGi~G~~~A~~La~rG~~V~LlE~~~~~~--GtS~~s~gli~~g~ryl~~~~~~l~~~~~~e~~~l~~~-~ 107 (571)
T 2rgh_A 31 EELDLLIIGGGITGAGVAVQAAASGIKTGLIEMQDFAE--GTSSRSTKLVHGGIRYLKTFDVEVVADTVGERAVVQGI-A 107 (571)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTC--SGGGSSCSEECCCGGGGGGTCHHHHHHHHHHHHHHHHH-C
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCC--CcccccccccccccchhhccChHHHHHHHHHHHHHHHh-C
Confidence 46899999999999999999999999999999987654 556666666654321 111223444444444333322 1
Q ss_pred CeeEeeeeeee--eCCC-----ChHHH---HHHHHHHH---hCCCCccccCHHHHHHhcCCcccCCCCeEEEEecCCeee
Q 015072 84 YKVYFKAHQFD--MGPS-----ENKSL---RSVIASCR---KNSVPHQVLDCRQVLQKYSGRIEIPENWVGVTTELGGVI 150 (413)
Q Consensus 84 ~~~~~~~~~~~--~~~~-----~~~~~---~~~~~~~~---~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 150 (413)
..+....+.+. +... ....+ ....+.+. ..+...+.++.+++.+.+|. +.......+++.+ ++.+
T Consensus 108 ~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~e~~~~~P~-l~~~~~~gg~~~~-dg~v 185 (571)
T 2rgh_A 108 PHIPKPDPMLLPIYEDEGATTFNMFSVKVAMDLYDKLANVTGTKYENYTLTPEEVLEREPF-LKKEGLKGAGVYL-DFRN 185 (571)
T ss_dssp TTSSEECCEEEEEESSSSSCSCCHHHHHHHHHHHHHHHTCSSSTTCCEEECHHHHHHHCTT-SCCTTEEEEEEEC-CEEC
T ss_pred cccccccCceEEeecccccccccHHHHHHHHHHHHHHhhhhccCCCcEEECHHHHHHhCcC-CchhhceEEEEec-CCeE
Confidence 11112222221 1110 11111 12223332 34566789999999999998 5533344556665 4788
Q ss_pred cHHHHHHHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeC---Cc--cEEEeCeEEEcCCcChhhhhhhhcCCC-
Q 015072 151 KPTKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTS---SG--EEFWGKKCVVTAGAWVGKLVKKISGLE- 224 (413)
Q Consensus 151 ~~~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~---~g--~~i~ad~vV~A~G~~~~~l~~~~~g~~- 224 (413)
+|.+++..+.+.+.+.|++|+++++|+++.. +++ ..+.|+.. ++ .+++||.||+|+|+|+..+.+.. +..
T Consensus 186 ~~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~--~~~-~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws~~l~~~~-g~~~ 261 (571)
T 2rgh_A 186 NDARLVIDNIKKAAEDGAYLVSKMKAVGFLY--EGD-QIVGVKARDLLTDEVIEIKAKLVINTSGPWVDKVRNLN-FTRP 261 (571)
T ss_dssp CHHHHHHHHHHHHHHTTCEEESSEEEEEEEE--ETT-EEEEEEEEETTTCCEEEEEBSCEEECCGGGHHHHHTTC-CSSC
T ss_pred chHHHHHHHHHHHHHcCCeEEeccEEEEEEE--eCC-EEEEEEEEEcCCCCEEEEEcCEEEECCChhHHHHHHhh-ccCc
Confidence 9999999999999999999999999999998 632 33344421 23 26999999999999999887754 543
Q ss_pred --cceeEEEEEEEEEEecCCCccccccCCCCceEEec---CCCeeEecCCCCCCCeEEEEeCCC-CcCCCCCCCCCCCcc
Q 015072 225 --LPIQAVETSVCYWRIKEGDEADYAVGGDFPSFASY---GDPHVYGTPSLEYPGLIKIALHRG-YLCDPDRRPWGPGPL 298 (413)
Q Consensus 225 --~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~p~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~ 298 (413)
.++.|.+|+++.++..... ...+.+... +.+.+|++|.. +.+.+|++.. ...++.... ...+.
T Consensus 262 ~~~~i~p~rG~~l~~~~~~~~-------~~~~~~~~~~~~dgr~~~~~P~~---~~~~iG~t~~~~~~~~~~~~-~~~~~ 330 (571)
T 2rgh_A 262 VSPKMRPTKGIHLVVDAKKLP-------VPQPTYFDTGKQDGRMVFAIPRE---NKTYFGTTDTDYQGDFTDPK-VTQED 330 (571)
T ss_dssp CCCCBCCEEEEEEEEEGGGSC-------CSSCEEEECSSSSSCEEEEEEET---TEEEECCCCEECCSCSSSCC-CCHHH
T ss_pred cCceeeccceEEEEeccccCC-------CCcEEEEeccCCCCcEEEEEEcC---CeEEEcCCCcCCCCCcCCCC-CCHHH
Confidence 5699999999988632211 112444332 33468888873 4444544221 111111111 11227
Q ss_pred hHHHHHHHHhhcCCC--CCCCCCceeeeeeeeccCCCC---------eEEecCCCCCCCCEEEEeCCCccccccchHHHH
Q 015072 299 LDSLKELIQGRFAGR--VDSSGPAATQLCMYSMTPDKD---------FVIDFLGGELGEDVVVAGGFSGHGFKMAPVVGR 367 (413)
Q Consensus 299 ~~~l~~~~~~~~p~~--~~~~~~~~~~~g~~~~t~d~~---------p~ig~~~~~~~~~~~~~~G~~~~G~~~a~~~a~ 367 (413)
++.+.+.+.++||.+ .+ ..+...|+|+||.++|+. |+|+... +|++.++| |. +|.++.+|+
T Consensus 331 ~~~ll~~~~~~~P~~~l~~-~~v~~~waG~Rp~~~d~~~~~~~~~r~~~i~~~~----~gl~~v~G--Gk-~Tt~r~~Ae 402 (571)
T 2rgh_A 331 VDYLLDVINHRYPEANITL-ADIEASWAGLRPLLIGNSGSPSTISRGSSLEREP----DGLLTLSG--GK-ITDYRKMAE 402 (571)
T ss_dssp HHHHHHHHHHHSTTTCCCG-GGCCEEEEEEECCBCC-----------EEEEECT----TSCEEEEE--CC-GGGHHHHHH
T ss_pred HHHHHHHHHHhcCccCCch-hceeEEeEEeeeccCCCCCCcccCCCCcEEecCC----CCeEEEeC--cc-hhhHHHHHH
Confidence 889999999999974 43 256789999999998753 7787533 78886554 22 999999999
Q ss_pred HHHHHHHc
Q 015072 368 ILADLVLS 375 (413)
Q Consensus 368 ~~a~~i~~ 375 (413)
.+++++++
T Consensus 403 ~~~~~i~~ 410 (571)
T 2rgh_A 403 GALRLIRQ 410 (571)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998863
No 19
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.96 E-value=1.1e-27 Score=232.36 Aligned_cols=343 Identities=17% Similarity=0.124 Sum_probs=208.1
Q ss_pred CCCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCCCCcceecccC--CccccchHHHHHHHHHHHHHhc
Q 015072 5 GENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESRTIRATYP--EDYYHPMVLESSLLWEQAQSEI 82 (413)
Q Consensus 5 ~~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~~~~~~s~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 82 (413)
+.++||+|||||++|+++|+.|+++|++|+|+|+++..+ ++|..+.+.++.... ......+..+.......+.+..
T Consensus 16 ~~~~DVvVIGgGi~Gl~~A~~La~~G~~V~LlEk~d~~~--GtS~~ss~lihgG~ryl~~~~~~l~~e~~~e~~~l~~~a 93 (561)
T 3da1_A 16 EKQLDLLVIGGGITGAGIALDAQVRGIQTGLVEMNDFAS--GTSSRSTKLVHGGLRYLKQFEIKLVAEVGKERAIVYENA 93 (561)
T ss_dssp TSCEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSSTTC--SGGGSSCCEECC---------------CHHHHHHHHHHC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCcEEEEECCCCCC--CcccCCcCccccchHHHHhcCHHHHHHHHHHHHHHHHhC
Confidence 346999999999999999999999999999999997664 444445555443221 1111122222222222222221
Q ss_pred CCeeEeeeeeee-eCCC-Ch-----HHHHHHHHHHH--hCCCCccccCHHHHHHhcCCcccCCCCeEEEEecCCeeecHH
Q 015072 83 GYKVYFKAHQFD-MGPS-EN-----KSLRSVIASCR--KNSVPHQVLDCRQVLQKYSGRIEIPENWVGVTTELGGVIKPT 153 (413)
Q Consensus 83 ~~~~~~~~~~~~-~~~~-~~-----~~~~~~~~~~~--~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 153 (413)
. .+......+. .... .. .......+.+. ......+.++..++...+|. +.......+++.+ ++.+++.
T Consensus 94 p-~l~~~~~~~~p~~~~~~~~~~~~~~g~~~~d~l~~~~~~~~~~~l~~~~~~~~~P~-l~~~~~~gg~~~~-dg~vd~~ 170 (561)
T 3da1_A 94 P-HVTTPEWMLLPIFKDGTFGKFSTSLGLKVYDYLADVRKDERRYMLNEKQTLEKEPL-LRKENLKGGGIYV-EYRTDDA 170 (561)
T ss_dssp T-TTCEEEEEEEEECC---------------------------CEEECHHHHHHHCTT-SCCTTCCEEEEEE-EEECCHH
T ss_pred c-hhccccceeEeecCCccHHHHHHHhHHHHHHHhhcccCCCCcEEECHHHHHHhCcc-CChhhceeEEEec-CceEcHH
Confidence 1 0001111000 0000 00 00001111111 11334678999999999997 5533345555555 4699999
Q ss_pred HHHHHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeC---Cc--cEEEeCeEEEcCCcChhhhhhhhcCCC--cc
Q 015072 154 KAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTS---SG--EEFWGKKCVVTAGAWVGKLVKKISGLE--LP 226 (413)
Q Consensus 154 ~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~---~g--~~i~ad~vV~A~G~~~~~l~~~~~g~~--~p 226 (413)
+++..+.+.+.+.|++++++++|++|.. +++ ..+.|++. +| .+++|+.||+|+|+|+..+.+.+ |.. .+
T Consensus 171 ~l~~~L~~~a~~~G~~i~~~~~V~~l~~--~~g-~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s~~l~~~~-g~~~~~~ 246 (561)
T 3da1_A 171 RLTLEIMKEAVARGAVALNYMKVESFIY--DQG-KVVGVVAKDRLTDTTHTIYAKKVVNAAGPWVDTLREKD-RSKHGKY 246 (561)
T ss_dssp HHHHHHHHHHHHTTCEEEESEEEEEEEE--ETT-EEEEEEEEETTTCCEEEEEEEEEEECCGGGHHHHHHTT-TCCCSSE
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEE--cCC-eEEEEEEEEcCCCceEEEECCEEEECCCcchHHHHHhc-CCCCCce
Confidence 9999999999999999999999999998 632 33345443 23 36999999999999999888776 654 68
Q ss_pred eeEEEEEEEEEEecCCCccccccCCCCceEEe--cCCCeeEecCCCCCCCeEEEEeCCC-CcCCCCCCCCCCCcchHHHH
Q 015072 227 IQAVETSVCYWRIKEGDEADYAVGGDFPSFAS--YGDPHVYGTPSLEYPGLIKIALHRG-YLCDPDRRPWGPGPLLDSLK 303 (413)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~p~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~ 303 (413)
+.|.+|+++.+...... ...+.+.. .+.+.+|++|. + |.+.+|++.. ...++.... ...+.++.++
T Consensus 247 v~p~kG~~lvl~~~~~~-------~~~~~~~~~~~dgr~v~~iP~-~--g~~~iGtT~~~~~~~~~~~~-~t~~~i~~ll 315 (561)
T 3da1_A 247 LKLSKGVHLVVDQSRFP-------LRQAVYFDTESDGRMIFAIPR-E--GKTYIGTTDTFYDKDIASPR-MTVEDRDYIL 315 (561)
T ss_dssp EEEEEEEEEEEEGGGSC-------CSSEEEECCSSSCCCEEEEEE-T--TEEEECCCCEEECSCTTCCC-CCHHHHHHHH
T ss_pred EEeccEEEEEECCccCC-------CceEEEeccCCCCcEEEEEec-C--CCEEEcCCCCccCCCcCCCC-CCHHHHHHHH
Confidence 99999999887633211 11233322 23445788887 3 5555554321 111111111 1222788999
Q ss_pred HHHHhhcCCCC--CCCCCceeeeeeeeccCC---------CCeEEecCCCCCCCCEEEEeCCCccccccchHHHHHHHHH
Q 015072 304 ELIQGRFAGRV--DSSGPAATQLCMYSMTPD---------KDFVIDFLGGELGEDVVVAGGFSGHGFKMAPVVGRILADL 372 (413)
Q Consensus 304 ~~~~~~~p~~~--~~~~~~~~~~g~~~~t~d---------~~p~ig~~~~~~~~~~~~~~G~~~~G~~~a~~~a~~~a~~ 372 (413)
+.++++||.+. . ..++..|+|+||.+.| +..+|...+ ++++.++| |. +|.++.+|+.++++
T Consensus 316 ~~~~~~~P~l~~~~-~~v~~~~aGlRPl~~~~~~~~~~~sR~~~i~~~~----~gli~i~G--gk-~Tt~r~mAe~~~d~ 387 (561)
T 3da1_A 316 AAANYMFPSLRLTA-DDVESSWAGLRPLIHEEGKKASEISRKDEIFFSD----SGLISIAG--GK-LTGYRKMAERTVDA 387 (561)
T ss_dssp HHHHHHCTTCCCCT-TTEEEEEEEEEEEEEC-----------CCEEECS----SCCEEECC--CC-STTHHHHHHHHHHH
T ss_pred HHHHHhCCCCCCCh-hhEEEEeEEeccccCCCCCCccccccceEEEecC----CCeEEEeC--Ch-hhhHHHHHHHHHHH
Confidence 99999999876 3 3577899999999765 234443332 66666664 44 99999999999998
Q ss_pred HHc
Q 015072 373 VLS 375 (413)
Q Consensus 373 i~~ 375 (413)
+.+
T Consensus 388 ~~~ 390 (561)
T 3da1_A 388 VAQ 390 (561)
T ss_dssp HHH
T ss_pred HHH
Confidence 863
No 20
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.78 E-value=7.8e-17 Score=156.31 Aligned_cols=222 Identities=15% Similarity=0.060 Sum_probs=118.8
Q ss_pred eeecHHHHHHHHHHHHHHcCCeEecCceEEEEEeeeccCCC----cEEEEeCCc---cEEEeCeEEEcCCcChhhhhhhh
Q 015072 148 GVIKPTKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRG----GVTVVTSSG---EEFWGKKCVVTAGAWVGKLVKKI 220 (413)
Q Consensus 148 ~~~~~~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~----~~~v~~~~g---~~i~ad~vV~A~G~~~~~l~~~~ 220 (413)
..++...+.+.|.+.+.+.|++++++++|++++. + ++ ++.+++.++ .+++||+||.|+|.++ .+.+.+
T Consensus 115 ~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~--~--~~~~~~~v~v~~~~~~~~~~i~a~~vV~AdG~~S-~vR~~l 189 (535)
T 3ihg_A 115 AMLSQDKLEPILLAQARKHGGAIRFGTRLLSFRQ--H--DDDAGAGVTARLAGPDGEYDLRAGYLVGADGNRS-LVRESL 189 (535)
T ss_dssp BCCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEE--E--CGGGCSEEEEEEEETTEEEEEEEEEEEECCCTTC-HHHHHT
T ss_pred cccCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEE--C--CCCccccEEEEEEcCCCeEEEEeCEEEECCCCcc-hHHHHc
Confidence 4556688889999999999999999999999998 6 33 677766554 5799999999999998 555555
Q ss_pred cCCCcceeEEEEEEEEEEecCCCccccccCCCC-ceEEecCCCeeEecCCCCCCCeEEEEeCCCCcCCCCCCCCCCCcch
Q 015072 221 SGLELPIQAVETSVCYWRIKEGDEADYAVGGDF-PSFASYGDPHVYGTPSLEYPGLIKIALHRGYLCDPDRRPWGPGPLL 299 (413)
Q Consensus 221 ~g~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (413)
|+..+..+.....+.+........ +...... ..+....+...++.|.... +.+..... .+++..+....-..
T Consensus 190 -gi~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~~~~~p~~~~-~~~~~~~~----~~~~~~~~~~~~~~ 262 (535)
T 3ihg_A 190 -GIGRYGHGTLTHMVGVIFDADLSG-IMEPGTTGWYYLHHPEFKGTFGPTDRP-DRHTLFVE----YDPDEGERPEDFTP 262 (535)
T ss_dssp -TCCEEEEEEEEEEEEEEEECCGGG-TSCTTCCEEEEEECSSCEEEEEECSST-TEEEEEEE----ECTTTTCCGGGCCH
T ss_pred -CCCcCCCCccceEEEEEEeccChh-hccCCceEEEEEECCCceEEEEEecCC-CEEEEEEe----eCccccCccccCCH
Confidence 666555554444433333222211 1111101 1122222233344444322 22222111 11111000000034
Q ss_pred HHHHHHHHhhcCCCCCCCCCceeeeeee--------eccCCCCeEEecCCCCCCCCEEEEeCCCccccccchHHHHHHHH
Q 015072 300 DSLKELIQGRFAGRVDSSGPAATQLCMY--------SMTPDKDFVIDFLGGELGEDVVVAGGFSGHGFKMAPVVGRILAD 371 (413)
Q Consensus 300 ~~l~~~~~~~~p~~~~~~~~~~~~~g~~--------~~t~d~~p~ig~~~~~~~~~~~~~~G~~~~G~~~a~~~a~~~a~ 371 (413)
+.+.+.+++.++.... ...-.+...+ .+..++..++| +-.....-++|+|+.+|..-|..|+.
T Consensus 263 e~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~a~~~~~grv~LvG-------DAAH~~~P~~GqG~n~ai~DA~~La~ 333 (535)
T 3ihg_A 263 QRCVELIGLALDAPEV--KPELVDIQGWEMAARIAERWREGRVFLAG-------DAAKVTPPTGGMSGNAAVADGFDLAW 333 (535)
T ss_dssp HHHHHHHHHHHTCSSC--CCEEEEEEEEEEEEEEESCSEETTEEECT-------TTTEECCSTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCC--ceeEEEeeEeeeeEEEECccccCCEEEEe-------cccccCCCccCCccccccccHHHHHH
Confidence 5566667776653221 1111122111 12334555555 44555666788888887776666665
Q ss_pred HHH---cCCCCccccccccccc
Q 015072 372 LVL---SGEAQGVELRHFRIAR 390 (413)
Q Consensus 372 ~i~---~~~~~~~~~~~~~~~R 390 (413)
.|. .+...+..++.|.-.|
T Consensus 334 ~La~~l~g~~~~~lL~~Ye~eR 355 (535)
T 3ihg_A 334 KLAAVLQGQAGAGLLDTYEDER 355 (535)
T ss_dssp HHHHHHTTSSCTTHHHHHHHHH
T ss_pred HHHHHhcCCCcHHHHHhhHHHH
Confidence 553 2433334466665555
No 21
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.78 E-value=1.4e-17 Score=156.85 Aligned_cols=209 Identities=11% Similarity=-0.009 Sum_probs=118.3
Q ss_pred eeecHHHHHHHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeCCcc--EEEeCeEEEcCCcChhhhhhhhcCCCc
Q 015072 148 GVIKPTKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGE--EFWGKKCVVTAGAWVGKLVKKISGLEL 225 (413)
Q Consensus 148 ~~~~~~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~--~i~ad~vV~A~G~~~~~l~~~~~g~~~ 225 (413)
..+++..+.+.|.+.+.+.|++++++++|+++.. +++...+.+.+.+|+ +++||.||.|+|.++ .+.+.+ +...
T Consensus 101 ~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~--~~~~~~v~v~~~~g~~~~~~a~~vV~A~G~~s-~l~~~~-g~~~ 176 (421)
T 3nix_A 101 WQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKF--FGTDSVTTIEDINGNKREIEARFIIDASGYGR-VIPRMF-GLDK 176 (421)
T ss_dssp EECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEE--ETTEEEEEEEETTSCEEEEEEEEEEECCGGGC-HHHHHT-TCEE
T ss_pred eEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEE--eCCEEEEEEEcCCCCEEEEEcCEEEECCCCch-hhHHhc-CCCC
Confidence 5678899999999999999999999999999998 633234567778887 699999999999988 444444 6655
Q ss_pred ceeEEEEEEEEEEecCCCcc-ccccCCCCceEE--ecCCCeeEecCCCCCCCeEEEEeCCCCcCCCCCCCCCCCcchHHH
Q 015072 226 PIQAVETSVCYWRIKEGDEA-DYAVGGDFPSFA--SYGDPHVYGTPSLEYPGLIKIALHRGYLCDPDRRPWGPGPLLDSL 302 (413)
Q Consensus 226 p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l 302 (413)
|........+...+...... .+.. ....... .....++|.+|..+ +...++............ . ..+.+
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~P~~~--~~~~vg~~~~~~~~~~~~----~-~~~~~ 248 (421)
T 3nix_A 177 PSGFESRRTLFTHIKDVKRPVAAEM-EGNRITAVVHKPKVWIWVIPFSN--GNTSVGFVGEPSYFDEYT----G-TPEER 248 (421)
T ss_dssp CCSSCCCEEEEEEEECTTCCC-----CCSEEEEEEEETTEEEEEEECTT--SEEEEEEEECHHHHTTSC----S-CHHHH
T ss_pred CCcCCCcEEEEEEECCCcCCCccCC-CCeEEEEEeCCCCEEEEEEEECC--CCEEEEEEecHHHhhhcC----C-CHHHH
Confidence 54433344443333332111 1111 1122222 22344677778654 433333211111000000 0 23333
Q ss_pred HHHHHhhcCCCCCC------CCCceeeee----eeeccCCCCeEEecCCCCCCCCEEEEeCCCccccccchHHHHHHHHH
Q 015072 303 KELIQGRFAGRVDS------SGPAATQLC----MYSMTPDKDFVIDFLGGELGEDVVVAGGFSGHGFKMAPVVGRILADL 372 (413)
Q Consensus 303 ~~~~~~~~p~~~~~------~~~~~~~~g----~~~~t~d~~p~ig~~~~~~~~~~~~~~G~~~~G~~~a~~~a~~~a~~ 372 (413)
.+.+.+.+|.+.+. ......+.+ ...+..++.+++|.-. .....+.|+|+.+|...|..+|+.
T Consensus 249 l~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAa-------~~~~P~~G~G~~~A~~~a~~la~~ 321 (421)
T 3nix_A 249 MRAMIANEGHIAERFKSEEFLFEPRTIEGYAISASKLYGDGFVLTGNAT-------EFLDPIFSSGATFAMESGSKGGKL 321 (421)
T ss_dssp HHHHHHTCTTTHHHHTTCCBSSCCEEEECCCBEESCSEETTEEECGGGT-------CBCCSTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCcHHHHHHhcCccccCceeecccceeeeeeccCCEEEecccc-------cccCCcccccHHHHHHHHHHHHHH
Confidence 33444445543211 011122211 2234456777777433 334567899999999999999988
Q ss_pred HHc
Q 015072 373 VLS 375 (413)
Q Consensus 373 i~~ 375 (413)
|.+
T Consensus 322 l~~ 324 (421)
T 3nix_A 322 AVQ 324 (421)
T ss_dssp HHH
T ss_pred HHH
Confidence 863
No 22
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.76 E-value=1.7e-17 Score=155.16 Aligned_cols=287 Identities=18% Similarity=0.150 Sum_probs=148.7
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCCCCcceecccCCccccchHHHHHHHHHHHHHhcCCe-
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESRTIRATYPEDYYHPMVLESSLLWEQAQSEIGYK- 85 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 85 (413)
++||+|||||++|+++|+.|+++|++|+|+|+....+.... ..+.+. .++.+.+++.
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~---~~~~~~-------------------~~~~~~lg~~~ 61 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVR---CGEGLS-------------------KGILNEADIKA 61 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCC---SCCEEE-------------------THHHHHTTCCC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcc---cccccC-------------------HHHHHHcCCCC
Confidence 58999999999999999999999999999999875532111 111110 0111122221
Q ss_pred ---e-EeeeeeeeeCCCChHHHHHHHHHHHhCCCCccccCHHHHHHhcCCcccCCCCeEEEEecCCeeecHHHHHHHHHH
Q 015072 86 ---V-YFKAHQFDMGPSENKSLRSVIASCRKNSVPHQVLDCRQVLQKYSGRIEIPENWVGVTTELGGVIKPTKAVSMFQT 161 (413)
Q Consensus 86 ---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 161 (413)
. ......+.+.... +.....+.... ...+....++...+.+.|.+
T Consensus 62 ~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~-----------------~~~~~~~~~~~~~l~~~L~~ 110 (397)
T 3cgv_A 62 DRSFIANEVKGARIYGPS--------------EKRPIILQSEK-----------------AGNEVGYVLERDKFDKHLAA 110 (397)
T ss_dssp CTTTEEEEESEEEEECTT--------------CSSCEEEC----------------------CCCEEEECHHHHHHHHHH
T ss_pred ChHHhhhhcceEEEEcCC--------------CCEEEEEeccc-----------------cCCceeEEEeHHHHHHHHHH
Confidence 0 0111111110000 00000000000 00122456788899999999
Q ss_pred HHHHcCCeEecCceEEEEEeeeccCCCcEE-EEe---CCccEEEeCeEEEcCCcChhhhhhhhcCCCc-ce---eEEEEE
Q 015072 162 LAIKNGAVLRDNTEVKTVLKVKDDVRGGVT-VVT---SSGEEFWGKKCVVTAGAWVGKLVKKISGLEL-PI---QAVETS 233 (413)
Q Consensus 162 ~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~-v~~---~~g~~i~ad~vV~A~G~~~~~l~~~~~g~~~-p~---~~~~~~ 233 (413)
.+.+.|++++.+++|+++.. + ++.+. |++ .++.+++||.||.|+|.++ .+.+.+ +... +. ....+.
T Consensus 111 ~~~~~gv~i~~~~~v~~i~~--~--~~~v~gv~~~~~~~~~~~~a~~vV~A~G~~s-~~~~~~-g~~~~~~~~~~~~~~~ 184 (397)
T 3cgv_A 111 LAAKAGADVWVKSPALGVIK--E--NGKVAGAKIRHNNEIVDVRAKMVIAADGFES-EFGRWA-GLKSVILARNDIISAL 184 (397)
T ss_dssp HHHHHTCEEESSCCEEEEEE--E--TTEEEEEEEEETTEEEEEEEEEEEECCCTTC-HHHHHH-TCCTTCCCGGGEEEEE
T ss_pred HHHhCCCEEEECCEEEEEEE--e--CCEEEEEEEEECCeEEEEEcCEEEECCCcch-HhHHhc-CCCccCCChhheeEEE
Confidence 99999999999999999998 6 33443 544 3455799999999999998 555555 6554 22 222222
Q ss_pred EEEEEecCCCccccccCCCCceEEe--cCCCeeEecCCCCCCCeEEEEeCCCCcCCCCCCCCCCCcchHHHHHHHHhhcC
Q 015072 234 VCYWRIKEGDEADYAVGGDFPSFAS--YGDPHVYGTPSLEYPGLIKIALHRGYLCDPDRRPWGPGPLLDSLKELIQGRFA 311 (413)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p 311 (413)
.+.+..... .+ .....+.. ....++|.+|..+ +.+.++...... .. ..........+.+.+..|
T Consensus 185 --~~~~~~~~~---~~-~~~~~~~~~~~~~g~~~~~P~~~--~~~~vg~~~~~~-~~-----~~~~~~~~~l~~~~~~~~ 250 (397)
T 3cgv_A 185 --QYRMINVDV---DP-DYTDFYLGSIAPAGYIWVFPKGE--GMANVGIGSSIN-WI-----HNRFELKNYLDRFIENHP 250 (397)
T ss_dssp --EEEEESCCC---CT-TEEEEECSTTSTTEEEEEEEEET--TEEEEEEEEETT-TC-----SCHHHHHHHHHHHHHTCH
T ss_pred --EEEeccCCC---CC-CcEEEEeCCcCCCceEEEEECCC--CeEEEEEEeccc-cc-----cCCCCHHHHHHHHHHhCc
Confidence 112211110 00 00111111 2334567777643 333222211000 00 000122222233333334
Q ss_pred CCCCCCCCceeeeeeeeccC-------CCCeEEecCCCCCCCCEEEEeCCCccccccchHHHHHHHHHHH
Q 015072 312 GRVDSSGPAATQLCMYSMTP-------DKDFVIDFLGGELGEDVVVAGGFSGHGFKMAPVVGRILADLVL 374 (413)
Q Consensus 312 ~~~~~~~~~~~~~g~~~~t~-------d~~p~ig~~~~~~~~~~~~~~G~~~~G~~~a~~~a~~~a~~i~ 374 (413)
.+.. ..+...+.+..|++. ++..++| +.......++|.|+.+|...|..+|+.|.
T Consensus 251 ~~~~-~~~~~~~~~~~p~~~~~~~~~~~~v~liG-------DAa~~~~P~~G~G~~~a~~~a~~la~~l~ 312 (397)
T 3cgv_A 251 GLKK-GQDIQLVTGGVSVSKVKMPITMPGLMLVG-------DAARLIDPITGGGIANAIVSGMYAAQVTK 312 (397)
T ss_dssp HHHT-SEEEEEEEEEEECCCCCSCCEETTEEECG-------GGGTCSCTTTCCCHHHHHHHHHHHHHHHH
T ss_pred CCCC-CeEEeeeeeeeecCCCccceeeCCEEEEE-------ccccCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 3332 134566777777632 2223333 11122345788999999998888887765
No 23
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.74 E-value=5.2e-17 Score=157.59 Aligned_cols=312 Identities=15% Similarity=0.100 Sum_probs=159.3
Q ss_pred CCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCCCCcceecccCCccccchHHHHHHHHHHHHHhcCCe
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESRTIRATYPEDYYHPMVLESSLLWEQAQSEIGYK 85 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (413)
+++||+|||||++|+++|+.|+++|++|+|||+.+.....+.. ..+...+.+.++++ ++.
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~----------------~~l~~~s~~~l~~l----Gl~ 107 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRA----------------GALHIRTVETLDLR----GLL 107 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSC----------------CCBCHHHHHHHHTT----TCH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceE----------------EEECHHHHHHHHHc----CCh
Confidence 4589999999999999999999999999999998665311111 11222233332221 110
Q ss_pred e-EeeeeeeeeCCCChHHHHHHHHHHHhCCCCccccCHHHHHHhcCCcccCCCCeEEEEecCCeeecHHHHHHHHHHHHH
Q 015072 86 V-YFKAHQFDMGPSENKSLRSVIASCRKNSVPHQVLDCRQVLQKYSGRIEIPENWVGVTTELGGVIKPTKAVSMFQTLAI 164 (413)
Q Consensus 86 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 164 (413)
- +...+ ....... + .+.....++..+. .. ..+....++...+.+.|.+.+.
T Consensus 108 ~~l~~~~-~~~~~~~----------~--~~~~~~~~~~~~~----------~~-----~~~~~~~i~~~~l~~~L~~~a~ 159 (570)
T 3fmw_A 108 DRFLEGT-QVAKGLP----------F--AGIFTQGLDFGLV----------DT-----RHPYTGLVPQSRTEALLAEHAR 159 (570)
T ss_dssp HHHTTSC-CBCSBCC----------B--TTBCTTCCBGGGS----------CC-----SCCSBBCCCHHHHHHHHHHHHH
T ss_pred HHHHhcC-cccCCce----------e--CCccccccccccc----------CC-----CCCeeEEeCHHHHHHHHHHHHH
Confidence 0 00000 0000000 0 0000001110000 00 0122345677889999999998
Q ss_pred HcCCeEecCceEEEEEeeeccCCCcEEEEe--CCc-cEEEeCeEEEcCCcChhhhhhhhcCCCcceeEEEEEEEEEEecC
Q 015072 165 KNGAVLRDNTEVKTVLKVKDDVRGGVTVVT--SSG-EEFWGKKCVVTAGAWVGKLVKKISGLELPIQAVETSVCYWRIKE 241 (413)
Q Consensus 165 ~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~--~~g-~~i~ad~vV~A~G~~~~~l~~~~~g~~~p~~~~~~~~~~~~~~~ 241 (413)
+.|++|+++++|++++. + ++.+.|++ .+| ++++||+||.|+|.++ .+.+.+ |+..+..+.....+...+..
T Consensus 160 ~~gv~i~~~~~v~~l~~--~--~~~v~v~~~~~~G~~~~~a~~vV~ADG~~S-~vR~~l-Gi~~~~~~~~~~~~~~~v~~ 233 (570)
T 3fmw_A 160 EAGAEIPRGHEVTRLRQ--D--AEAVEVTVAGPSGPYPVRARYGVGCDGGRS-TVRRLA-ADRFPGTEATVRALIGYVTT 233 (570)
T ss_dssp HHTEECCBSCEEEECCB--C--SSCEEEEEEETTEEEEEEESEEEECSCSSC-HHHHHT-TCCCCCCCCCEEEEEEECCC
T ss_pred hCCCEEEeCCEEEEEEE--c--CCeEEEEEEeCCCcEEEEeCEEEEcCCCCc-hHHHHc-CCCCccceeeeEEEEEEEEe
Confidence 88999999999999988 6 45566665 778 5799999999999998 454544 77666555555554444332
Q ss_pred CCccccccCCCCceEEecCCCeeEe-cCCCCCCC-eEEEEeCCCCcCCCCCCCCCCCcchHHHHHHHHhhcCCCCCCCCC
Q 015072 242 GDEADYAVGGDFPSFASYGDPHVYG-TPSLEYPG-LIKIALHRGYLCDPDRRPWGPGPLLDSLKELIQGRFAGRVDSSGP 319 (413)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~ 319 (413)
.... +. +. +.......+++ .|..+..- .+........ .. +.......+++.+.+.+.++.......
T Consensus 234 ~~~~-~~----~~-~~~~~~G~~~~~~P~~~g~~~~i~~~~~~~~---~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~- 301 (570)
T 3fmw_A 234 PERE-VP----RR-WERTPDGILVLAFPPEGGLGPGWSSSSTGHS---PA--ADEGPVTLEDLGAAVARVRGTPLTLTE- 301 (570)
T ss_dssp CSCS-SC----CC-CCCCCSSCEEECCCC------CEEEEEESCC----------CCCCHHHHHHHTTSSSSCCCCCCS-
T ss_pred cCCC-cc----eE-EEecCCEEEEEEeecCCCeEEEEEEEeCCCC---cc--ccccCCCHHHHHHHHHHHhhcccccce-
Confidence 2211 00 00 01111222333 46543211 1222221110 00 011111467777777777775432211
Q ss_pred ceeeeeeeec--------cCCCCeEEecCCCCCCCCEEEEeCCCccccccchHHHHHHHHHHHc---CCCCccccccccc
Q 015072 320 AATQLCMYSM--------TPDKDFVIDFLGGELGEDVVVAGGFSGHGFKMAPVVGRILADLVLS---GEAQGVELRHFRI 388 (413)
Q Consensus 320 ~~~~~g~~~~--------t~d~~p~ig~~~~~~~~~~~~~~G~~~~G~~~a~~~a~~~a~~i~~---~~~~~~~~~~~~~ 388 (413)
...|...++. ..++..++| +-.....-++|+|+.+|..-|..|+..|.. +......++.|.-
T Consensus 302 ~~~~~~~~~~~~~~a~~~~~grv~LvG-------DAAH~~~P~~GqG~n~gl~DA~~La~~La~~~~g~~~~~lL~~Ye~ 374 (570)
T 3fmw_A 302 PVSWLSRFGDASRQAKRYRSGRVLLAG-------DAAHVHFPIGGQGLNTGLQDAVNLGWKLAARVRGWGSEELLDTYHD 374 (570)
T ss_dssp CCEEEEEECCCCEECSCSEETTEEECG-------GGTEECCCCSSCHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHH
T ss_pred eeeeeEEeecccccccccccCCEEEEE-------ecceecCCCcCcCHhHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHH
Confidence 1114333322 123333444 334455567888888877766666555432 4333334566655
Q ss_pred cc
Q 015072 389 AR 390 (413)
Q Consensus 389 ~R 390 (413)
.|
T Consensus 375 eR 376 (570)
T 3fmw_A 375 ER 376 (570)
T ss_dssp HH
T ss_pred HH
Confidence 55
No 24
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.71 E-value=2.7e-15 Score=143.62 Aligned_cols=306 Identities=16% Similarity=0.132 Sum_probs=159.7
Q ss_pred CCCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCCCCcceecccCCccccchHHHHHHHHHHHHHhcCC
Q 015072 5 GENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESRTIRATYPEDYYHPMVLESSLLWEQAQSEIGY 84 (413)
Q Consensus 5 ~~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (413)
++++||+|||||++|+++|+.|+++|++|+|||+.+.....+. + ..+...+.+.++++ |+
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r----~------------~~l~~~~~~~l~~l----Gl 69 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESR----G------------LGFTARTMEVFDQR----GI 69 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCC----S------------EEECHHHHHHHHHT----TC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCc----e------------eEECHHHHHHHHHC----CC
Confidence 4679999999999999999999999999999999865422111 1 11222333333322 21
Q ss_pred ee-Eeee---eeeeeCCCChHHHHHHHHHHHhCCCCccccCHHHHHHhcCCcccCCCCeEEEEecCCeeecHHHHHHHHH
Q 015072 85 KV-YFKA---HQFDMGPSENKSLRSVIASCRKNSVPHQVLDCRQVLQKYSGRIEIPENWVGVTTELGGVIKPTKAVSMFQ 160 (413)
Q Consensus 85 ~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 160 (413)
.- +... ....+ .+. .++... .+ .. .+....++...+.+.|.
T Consensus 70 ~~~~~~~~~~~~~~~-----------------~~~---~~~~~~----~~------~~-----~~~~~~i~~~~l~~~L~ 114 (499)
T 2qa2_A 70 LPAFGPVETSTQGHF-----------------GGR---PVDFGV----LE------GA-----HYGVKAVPQSTTESVLE 114 (499)
T ss_dssp GGGGCSCCEESEEEE-----------------TTE---EEEGGG----ST------TC-----CCEEEEEEHHHHHHHHH
T ss_pred HHHHHhcccccccee-----------------cce---eccccc----CC------CC-----CCceEecCHHHHHHHHH
Confidence 10 0000 00000 000 000000 00 00 01123456678888999
Q ss_pred HHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeCCcc---EEEeCeEEEcCCcChhhhhhhhcCCCcceeEEEEEEEEE
Q 015072 161 TLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGE---EFWGKKCVVTAGAWVGKLVKKISGLELPIQAVETSVCYW 237 (413)
Q Consensus 161 ~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~---~i~ad~vV~A~G~~~~~l~~~~~g~~~p~~~~~~~~~~~ 237 (413)
+.+.+.|++++++++|++++. + ++.+.+++.+++ +++||+||.|+|.+|. +.+.+ |+..+-.......+..
T Consensus 115 ~~~~~~gv~v~~~~~v~~i~~--~--~~~v~v~~~~~~g~~~~~a~~vVgADG~~S~-VR~~l-g~~~~~~~~~~~~~~~ 188 (499)
T 2qa2_A 115 EWALGRGAELLRGHTVRALTD--E--GDHVVVEVEGPDGPRSLTTRYVVGCDGGRST-VRKAA-GFDFPGTSASREMFLA 188 (499)
T ss_dssp HHHHHTTCEEEESCEEEEEEE--C--SSCEEEEEECSSCEEEEEEEEEEECCCTTCH-HHHHT-TCCCCEECCCCCEEEE
T ss_pred HHHHhCCCEEEcCCEEEEEEE--e--CCEEEEEEEcCCCcEEEEeCEEEEccCcccH-HHHHc-CCCCCCCCCccEEEEE
Confidence 999889999999999999998 7 456777766653 6999999999999985 44444 6555433322222222
Q ss_pred EecCCCccccccCCCCceEEecCCCeeEecCCCCCCCeEEEEeCCCCcCCCCCCCCCCCcchHHHHHHHHhhcCCCCCCC
Q 015072 238 RIKEGDEADYAVGGDFPSFASYGDPHVYGTPSLEYPGLIKIALHRGYLCDPDRRPWGPGPLLDSLKELIQGRFAGRVDSS 317 (413)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~ 317 (413)
.+..... + ..+ .+....+..+++.|..+ +.+.+..... +....++......+++.+.+.+.++.....
T Consensus 189 ~v~~~~~----~-~~~-~~~~~~~g~~~~~P~~~--g~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~- 256 (499)
T 2qa2_A 189 DIRGCEI----T-PRP-IGETVPLGMVMSAPLGD--GVDRIIVCER---GAPARRRTGPPPYQEVAAAWQRLTGQDISH- 256 (499)
T ss_dssp EEESCCC----C-CEE-EEEEETTEEEEEEECSS--SCEEEEEEET---TCCCCCCSSSCCHHHHHHHHHHHHSCCCTT-
T ss_pred EEEECCC----C-cce-EEEECCCeEEEEEEcCC--CEEEEEEEec---CCCCccccCCCCHHHHHHHHHHHhCCCCCc-
Confidence 2221111 0 001 11222334456666643 4332222100 000001111114567777777777642211
Q ss_pred CCceeeeeeee--------ccCCCCeEEecCCCCCCCCEEEEeCCCccccccchHHHHHHHHHHH---cCCCCccccccc
Q 015072 318 GPAATQLCMYS--------MTPDKDFVIDFLGGELGEDVVVAGGFSGHGFKMAPVVGRILADLVL---SGEAQGVELRHF 386 (413)
Q Consensus 318 ~~~~~~~g~~~--------~t~d~~p~ig~~~~~~~~~~~~~~G~~~~G~~~a~~~a~~~a~~i~---~~~~~~~~~~~~ 386 (413)
....|...++ +..++..++| +-.....-++|+|+.+|..-|..|+..|. .|...+..++.|
T Consensus 257 -~~~~~~~~~~~~~~~a~~~~~grv~L~G-------DAAH~~~P~~GqG~n~gi~DA~~La~~La~~l~g~~~~~~L~~Y 328 (499)
T 2qa2_A 257 -GEPVWVSAFGDPARQVSAYRRGRVLLAG-------DSAHVHLPAGGQGMNVSVQDSVNLGWKLAAVVSGRAPAGLLDTY 328 (499)
T ss_dssp -CEEEEEEEECCCEEECSCSEETTEEECG-------GGTEEECCCSSCHHHHHHHHHHHHHHHHHHHHTTSSCTHHHHHH
T ss_pred -cceeEEEEEeCCcEEcccccCCCEEEEe-------cccccCCCccccchhhhHHHHHHHHHHHHHHHcCCCChHHHHHH
Confidence 1112322221 1223344444 34455666789998888776665554432 244333456667
Q ss_pred ccccc
Q 015072 387 RIARF 391 (413)
Q Consensus 387 ~~~R~ 391 (413)
.-.|.
T Consensus 329 e~eR~ 333 (499)
T 2qa2_A 329 HEERH 333 (499)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66653
No 25
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.71 E-value=4.6e-17 Score=158.22 Aligned_cols=209 Identities=13% Similarity=0.059 Sum_probs=113.7
Q ss_pred CCeeecHHHHHHHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeC-Cc--cEEEeCeEEEcCCcChhhhhhhhcC
Q 015072 146 LGGVIKPTKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTS-SG--EEFWGKKCVVTAGAWVGKLVKKISG 222 (413)
Q Consensus 146 ~~~~~~~~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~-~g--~~i~ad~vV~A~G~~~~~l~~~~~g 222 (413)
....++...+.+.|.+.+.+.|++++++++|+++.. ++ +..+.|.+. +| .+++||.||.|+|.++. +.+.+ +
T Consensus 121 ~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~--~~-g~~~~V~~~~~G~~~~i~AdlVV~AdG~~S~-lr~~l-g 195 (591)
T 3i3l_A 121 HAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDL--SD-PDRVVLTVRRGGESVTVESDFVIDAGGSGGP-ISRKL-G 195 (591)
T ss_dssp CEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEC--CS-TTCEEEEEEETTEEEEEEESEEEECCGGGCH-HHHHH-T
T ss_pred eeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEE--cC-CCEEEEEEecCCceEEEEcCEEEECCCCcch-hHHHc-C
Confidence 345678899999999999999999999999999998 62 355667665 66 47999999999999774 54554 5
Q ss_pred CCcceeEEEEEEEEEEecC--CCccccccCCCCceEEecCCCeeEecCCCCCCCeEEEEeCCCCcCCCCCCCCCCCcchH
Q 015072 223 LELPIQAVETSVCYWRIKE--GDEADYAVGGDFPSFASYGDPHVYGTPSLEYPGLIKIALHRGYLCDPDRRPWGPGPLLD 300 (413)
Q Consensus 223 ~~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (413)
...+........+...... ...... .............+|.+|..+ +.+.++.............. ..+
T Consensus 196 ~~~~~~~~~~~av~~~~~~~~~~~~~~---~~~~~~~~~~~G~~w~iPl~~--~~~sv~~~~~~~~~~~l~~~----~~~ 266 (591)
T 3i3l_A 196 VRQYDEFYRNFAVWSYFKLKDPFEGDL---KGTTYSITFEDGWVWMIPIKD--DLYSVGLVVDRSKSAEVREQ----GAD 266 (591)
T ss_dssp CEEEEEEEEEEEEEEEEECCCSCCSTT---TTCEEEEEETTEEEEEEECSS--SEEEEEEEEEGGGHHHHHHH----CHH
T ss_pred CCCCCccccceEEEEEEecCccccCCC---CCceEEEEcCCcEEEEEECCC--CeEEEEEEcCHHHHhhhccC----CHH
Confidence 4333322333333222111 111111 001112223445677777653 43333221100000000000 112
Q ss_pred HHHHHHHhhcCCC----CC---C--CCCceeeee-eeeccCCCCeEEecCCCCCCCCEEEEeCCCccccccchHHHHHHH
Q 015072 301 SLKELIQGRFAGR----VD---S--SGPAATQLC-MYSMTPDKDFVIDFLGGELGEDVVVAGGFSGHGFKMAPVVGRILA 370 (413)
Q Consensus 301 ~l~~~~~~~~p~~----~~---~--~~~~~~~~g-~~~~t~d~~p~ig~~~~~~~~~~~~~~G~~~~G~~~a~~~a~~~a 370 (413)
.+.+.+.+.+|.+ .. . ...+..|.+ ...+..++..+||-- ...+..+.|.|+.+|...|..+|
T Consensus 267 ~~~~~l~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~rvvLIGDA-------Ah~~~Pl~GqGinlAl~dA~~LA 339 (591)
T 3i3l_A 267 AFYSSTLAKCAKAMDILGGAEQVDEVRIVQDWSYDTEVFSADRFFLCGDA-------ACFTDPLFSQGVHLASQSAVSAA 339 (591)
T ss_dssp HHHHHHHTTCHHHHHHHTTCEECSCCEEEEEEEEEESCSEETTEEECGGG-------TCBCCGGGCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCHHHHHHHhcCccccCceEecccccchhhcccCCEEEEccc-------cccCCCcccccHHHHHHHHHHHH
Confidence 2223332333221 10 0 112233444 234456677777732 33445678999999999998888
Q ss_pred HHHHc
Q 015072 371 DLVLS 375 (413)
Q Consensus 371 ~~i~~ 375 (413)
+.|..
T Consensus 340 ~~L~~ 344 (591)
T 3i3l_A 340 AAIDR 344 (591)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88763
No 26
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.71 E-value=2.9e-16 Score=148.11 Aligned_cols=206 Identities=11% Similarity=0.016 Sum_probs=105.7
Q ss_pred HHHHHHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEE-EEeCCccEEEeCeEEEcCCcChh-hhhhhhcCC--Cc---
Q 015072 153 TKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVT-VVTSSGEEFWGKKCVVTAGAWVG-KLVKKISGL--EL--- 225 (413)
Q Consensus 153 ~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~-v~~~~g~~i~ad~vV~A~G~~~~-~l~~~~~g~--~~--- 225 (413)
..+.+.|.+.+++.|++|+++++|++|.. + ++.+. |+++ |+++.||.||+|++++.. .++...... ..
T Consensus 196 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~--~--~~~~~gv~~~-g~~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~ 270 (425)
T 3ka7_A 196 KGIIDALETVISANGGKIHTGQEVSKILI--E--NGKAAGIIAD-DRIHDADLVISNLGHAATAVLCSEALSKEADAAYF 270 (425)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEE--E--TTEEEEEEET-TEEEECSEEEECSCHHHHHHHTTTTCCTTTTHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEECCceeEEEE--E--CCEEEEEEEC-CEEEECCEEEECCCHHHHHHhcCCcccccCCHHHH
Confidence 67888999999999999999999999998 6 34444 6665 667999999999999864 444321011 00
Q ss_pred ----ceeEEEEEEEEEEecCCCccccccCCCCceEEecC-CCe-eEecCC-----CCCCCeEEEEeCCCCcCCCCCCCCC
Q 015072 226 ----PIQAVETSVCYWRIKEGDEADYAVGGDFPSFASYG-DPH-VYGTPS-----LEYPGLIKIALHRGYLCDPDRRPWG 294 (413)
Q Consensus 226 ----p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~p~-----~~~~g~~~~~~~~~~~~~~~~~~~~ 294 (413)
.+.+.....+.+........ ....+.... ... .+..++ ....|.-.+..+.....+ ..+ .
T Consensus 271 ~~~~~~~~~~~~~v~l~~~~~~~~------~~~~~~~~~~~~~~~~~~~s~~~p~~ap~G~~~l~~~~~~~~~--~~~-~ 341 (425)
T 3ka7_A 271 KMVGTLQPSAGIKICLAADEPLVG------HTGVLLTPYTRRINGVNEVTQADPELAPPGKHLTMCHQYVAPE--NVK-N 341 (425)
T ss_dssp HHHHHCCCBEEEEEEEEESSCSSC------SSSEEECCSSSSEEEEECGGGTCGGGSCTTCEEEEEEEEECGG--GGG-G
T ss_pred HHhhCcCCCceEEEEeecCCCccC------cCEEEECCChhhcceEEeccCCCCCcCCCCCeEEEEEeccccc--ccc-c
Confidence 11222233334433332110 011111111 111 112221 111232111111100000 000 0
Q ss_pred CCcchHHHHHHHHhhcCCCCCCCCCceeeeeeeec-cCCCCeEEecCCCCCCCCEEEEeCCC----ccccccchHHHHHH
Q 015072 295 PGPLLDSLKELIQGRFAGRVDSSGPAATQLCMYSM-TPDKDFVIDFLGGELGEDVVVAGGFS----GHGFKMAPVVGRIL 369 (413)
Q Consensus 295 ~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~-t~d~~p~ig~~~~~~~~~~~~~~G~~----~~G~~~a~~~a~~~ 369 (413)
.++..+.+.+.+.+++|........+..|....|. ++............ +|+|+++.+. |.|+.-+.+.|+.+
T Consensus 342 ~~~~~~~~~~~l~~~~p~~~~~~~~v~~~~~~~P~~~~~~~~~~~~~~p~--~gL~laG~~~~~~gg~gv~~~~~s~~~~ 419 (425)
T 3ka7_A 342 LESEIEMGLEDLKEIFPGKRYEVLLIQSYHDEWPVNRAASGTDPGNETPF--SGLYVVGDGAKGKGGIEVEGVALGVMSV 419 (425)
T ss_dssp HHHHHHHHHHHHHHHSTTCCEEEEEEEEEBTTBCSBSSCTTCCCCSBCSS--BTEEECSTTSCCTTCCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCCCCceEEEEEEEECCCccccccccCCCCCCCCCc--CCeEEeCCccCCCCCCccHHHHHHHHHH
Confidence 01256788888999999743111112234332332 33322222222222 6899977653 57777788899999
Q ss_pred HHHHH
Q 015072 370 ADLVL 374 (413)
Q Consensus 370 a~~i~ 374 (413)
++.|+
T Consensus 420 ~~~i~ 424 (425)
T 3ka7_A 420 MEKVL 424 (425)
T ss_dssp HHC--
T ss_pred HHHhh
Confidence 98876
No 27
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.71 E-value=3.2e-16 Score=149.84 Aligned_cols=204 Identities=12% Similarity=0.075 Sum_probs=105.3
Q ss_pred HHHHHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcChh-hhhhhhcCC-----Ccce
Q 015072 154 KAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWVG-KLVKKISGL-----ELPI 227 (413)
Q Consensus 154 ~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~~-~l~~~~~g~-----~~p~ 227 (413)
.+.+.|.+.+.+ ++|+++++|++|.. + ++++.|++.+|+++.||+||+|+.++.. .++... .. .++.
T Consensus 236 ~l~~~l~~~l~~--~~i~~~~~V~~i~~--~--~~~~~v~~~~g~~~~ad~vi~a~p~~~~~~l~~~~-~~~~~~~~~~~ 308 (470)
T 3i6d_A 236 TLVEEIEKQLKL--TKVYKGTKVTKLSH--S--GSCYSLELDNGVTLDADSVIVTAPHKAAAGMLSEL-PAISHLKNMHS 308 (470)
T ss_dssp HHHHHHHHTCCS--EEEECSCCEEEEEE--C--SSSEEEEESSSCEEEESEEEECSCHHHHHHHTTTS-TTHHHHHTCEE
T ss_pred HHHHHHHHhcCC--CEEEeCCceEEEEE--c--CCeEEEEECCCCEEECCEEEECCCHHHHHHHcCCc-hhhHHHhcCCC
Confidence 455544443322 68999999999998 7 4568899999977999999999998753 333221 10 2234
Q ss_pred eEEEEEEEEEEecCCC-ccccccCCCCceEEec-CCC-e----eEe---cCCCCCCCe-EEEEeCCCCcCCCCCCCCCCC
Q 015072 228 QAVETSVCYWRIKEGD-EADYAVGGDFPSFASY-GDP-H----VYG---TPSLEYPGL-IKIALHRGYLCDPDRRPWGPG 296 (413)
Q Consensus 228 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~-~----~~~---~p~~~~~g~-~~~~~~~~~~~~~~~~~~~~~ 296 (413)
.+.....+.++ ... .... ....+... ... . .|. .|.....+. +...... ........+...+
T Consensus 309 ~~~~~v~l~~~--~~~~~~~~----~~~g~l~~~~~~~~~~~~~~~s~~~~~~~p~~~~~l~~~~~-~~~~~~~~~~~~~ 381 (470)
T 3i6d_A 309 TSVANVALGFP--EGSVQMEH----EGTGFVISRNSDFAITACTWTNKKWPHAAPEGKTLLRAYVG-KAGDESIVDLSDN 381 (470)
T ss_dssp EEEEEEEEEES--STTCCCSS----CSSEEEECSTTCCSEEEEEEHHHHCGGGSCTTCEEEEEEEC-CSSCCGGGTSCHH
T ss_pred CceEEEEEEEC--chhcCCCC----CCeEEEccCCCCCCceEEEEEcCcCCCcCCCCCEEEEEEEC-CCCCccccCCCHH
Confidence 44333333332 211 1000 01111111 110 0 110 011111121 2111111 1111111111222
Q ss_pred cchHHHHHHHHhhcCCCCCCCC--Cceeeeeeee-ccCCCCeEEecC-----CCCCCCCEEEEeC-CCccccccchHHHH
Q 015072 297 PLLDSLKELIQGRFAGRVDSSG--PAATQLCMYS-MTPDKDFVIDFL-----GGELGEDVVVAGG-FSGHGFKMAPVVGR 367 (413)
Q Consensus 297 ~~~~~l~~~~~~~~p~~~~~~~--~~~~~~g~~~-~t~d~~p~ig~~-----~~~~~~~~~~~~G-~~~~G~~~a~~~a~ 367 (413)
+..+.+.+.+.+++|...+. . .+..|....| ++++..+.+..+ ... ++||+++. +.|.|+.-|...|+
T Consensus 382 ~~~~~~~~~l~~~~g~~~~p-~~~~~~~w~~a~p~~~~g~~~~~~~~~~~l~~~~--~~l~~aG~~~~g~gv~~a~~sG~ 458 (470)
T 3i6d_A 382 DIINIVLEDLKKVMNINGEP-EMTCVTRWHESMPQYHVGHKQRIKELREALASAY--PGVYMTGASFEGVGIPDCIDQGK 458 (470)
T ss_dssp HHHHHHHHHHGGGSCCCSCC-SEEEEEEEEEEEEECBTTHHHHHHHHHHHHHHHS--TTEEECSTTTSCCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCc-eEEEEEEcCCccCCCCCCHHHHHHHHHHHHHhhC--CCEEEEeecCCCCCHHHHHHHHH
Confidence 37788888899998864431 1 2345655443 444432211110 012 68999887 67788888999999
Q ss_pred HHHHHHH
Q 015072 368 ILADLVL 374 (413)
Q Consensus 368 ~~a~~i~ 374 (413)
.+|+.|+
T Consensus 459 ~aA~~i~ 465 (470)
T 3i6d_A 459 AAVSDAL 465 (470)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999887
No 28
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.71 E-value=3.1e-15 Score=143.28 Aligned_cols=307 Identities=16% Similarity=0.154 Sum_probs=157.8
Q ss_pred CCCCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCCCCcceecccCCccccchHHHHHHHHHHHHHhcC
Q 015072 4 SGENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESRTIRATYPEDYYHPMVLESSLLWEQAQSEIG 83 (413)
Q Consensus 4 ~~~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (413)
+.+++||+|||||++|+++|+.|+++|++|+|||+.+.....+. + ..+...+.+.+++ .|
T Consensus 8 ~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r----~------------~~l~~~~~~~l~~----lG 67 (500)
T 2qa1_A 8 HRSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESR----G------------LGFTARTMEVFDQ----RG 67 (500)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCC----S------------EEECHHHHHHHHT----TT
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCC----c------------ceECHHHHHHHHH----CC
Confidence 45679999999999999999999999999999999865432111 1 1112223333322 12
Q ss_pred Cee-Eeee---eeeeeCCCChHHHHHHHHHHHhCCCCccccCHHHHHHhcCCcccCCCCeEEEEecCCeeecHHHHHHHH
Q 015072 84 YKV-YFKA---HQFDMGPSENKSLRSVIASCRKNSVPHQVLDCRQVLQKYSGRIEIPENWVGVTTELGGVIKPTKAVSMF 159 (413)
Q Consensus 84 ~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 159 (413)
+.- +... ....+ .+. .++... .+. . .+....++...+.+.|
T Consensus 68 l~~~~~~~~~~~~~~~-----------------~~~---~~~~~~----~~~------~-----~~~~~~i~~~~l~~~L 112 (500)
T 2qa1_A 68 ILPRFGEVETSTQGHF-----------------GGL---PIDFGV----LEG------A-----WQAAKTVPQSVTETHL 112 (500)
T ss_dssp CGGGGCSCCBCCEEEE-----------------TTE---EEEGGG----STT------G-----GGCEEEEEHHHHHHHH
T ss_pred CHHHHHhccccccccc-----------------cce---eccccc----CCC------C-----CCceeecCHHHHHHHH
Confidence 110 0000 00000 000 000000 000 0 0112345567888899
Q ss_pred HHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeCCcc---EEEeCeEEEcCCcChhhhhhhhcCCCcceeEEEEEEEE
Q 015072 160 QTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGE---EFWGKKCVVTAGAWVGKLVKKISGLELPIQAVETSVCY 236 (413)
Q Consensus 160 ~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~---~i~ad~vV~A~G~~~~~l~~~~~g~~~p~~~~~~~~~~ 236 (413)
.+.+.+.|++++++++|++++. + ++.+.+++.+++ +++||+||.|+|.+|. +.+.+ |+..+-.......+.
T Consensus 113 ~~~~~~~gv~v~~~~~v~~i~~--~--~~~v~v~~~~~~g~~~~~a~~vVgADG~~S~-VR~~l-g~~~~~~~~~~~~~~ 186 (500)
T 2qa1_A 113 EQWATGLGADIRRGHEVLSLTD--D--GAGVTVEVRGPEGKHTLRAAYLVGCDGGRSS-VRKAA-GFDFPGTAATMEMYL 186 (500)
T ss_dssp HHHHHHTTCEEEETCEEEEEEE--E--TTEEEEEEEETTEEEEEEESEEEECCCTTCH-HHHHT-TCCCCEECCCCEEEE
T ss_pred HHHHHHCCCEEECCcEEEEEEE--c--CCeEEEEEEcCCCCEEEEeCEEEECCCcchH-HHHHc-CCCcCCCccceEEEE
Confidence 9999889999999999999998 6 456677665553 6999999999999985 44444 665554333222222
Q ss_pred EEecCCCccccccCCCCceEEecCCCeeEecCCCCCCCeEEEEeCCCCcCCCCCCCCCCCcchHHHHHHHHhhcCCCCCC
Q 015072 237 WRIKEGDEADYAVGGDFPSFASYGDPHVYGTPSLEYPGLIKIALHRGYLCDPDRRPWGPGPLLDSLKELIQGRFAGRVDS 316 (413)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~ 316 (413)
..+..... + ..+ .+....+..+++.|..+ +.+.+..... +....++......+++.+.+.+.++.....
T Consensus 187 ~~~~~~~~----~-~~~-~~~~~~~g~~~~~p~~~--g~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 255 (500)
T 2qa1_A 187 ADIKGVEL----Q-PRM-IGETLPGGMVMVGPLPG--GITRIIVCER---GTPPQRRETPPSWHEVADAWKRLTGDDIAH 255 (500)
T ss_dssp EEEESCCC----C-CEE-EEEEETTEEEEEEEETT--TEEEEEEEET---TCCC-----CCCHHHHHHHHHHHHSCCCTT
T ss_pred EEEEeCCC----C-Cce-EEEECCCcEEEEEEcCC--CEEEEEEEcC---CCCCccccCCCCHHHHHHHHHHhcCCCCCc
Confidence 22221111 0 001 11222234455666533 4332222110 000001111114566777777777642211
Q ss_pred CCCceeeeeeee--------ccCCCCeEEecCCCCCCCCEEEEeCCCccccccchHHHHHHHHHHH---cCCCCcccccc
Q 015072 317 SGPAATQLCMYS--------MTPDKDFVIDFLGGELGEDVVVAGGFSGHGFKMAPVVGRILADLVL---SGEAQGVELRH 385 (413)
Q Consensus 317 ~~~~~~~~g~~~--------~t~d~~p~ig~~~~~~~~~~~~~~G~~~~G~~~a~~~a~~~a~~i~---~~~~~~~~~~~ 385 (413)
....|...++ +..++..++| +-.....-++|+|+.+|..-|..|+..|. .|...+..++.
T Consensus 256 --~~~~~~~~~~~~~~~a~~~~~grv~L~G-------DAAH~~~P~~GqG~n~gi~DA~~La~~La~~~~g~~~~~~L~~ 326 (500)
T 2qa1_A 256 --AEPVWVSAFGNATRQVTEYRRGRVILAG-------DSAHIHLPAGGQGMNTSIQDAVNLGWKLGAVVNGTATEELLDS 326 (500)
T ss_dssp --SEEEEEEEEECCEEECSCSEETTEEECG-------GGTEECCCCSSCHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHH
T ss_pred --cceeEEEEeccCcEEccccccCCEEEEE-------ccccCCCCccccchhhhHHHHHHHHHHHHHHHcCCCChHHHHH
Confidence 1112322221 1223344444 34455566788888887776655544432 24443345666
Q ss_pred cccccc
Q 015072 386 FRIARF 391 (413)
Q Consensus 386 ~~~~R~ 391 (413)
|.-+|.
T Consensus 327 Y~~eR~ 332 (500)
T 2qa1_A 327 YHSERH 332 (500)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 766653
No 29
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.69 E-value=2.9e-16 Score=147.20 Aligned_cols=61 Identities=15% Similarity=0.124 Sum_probs=52.6
Q ss_pred eeecHHHHHHHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcChh
Q 015072 148 GVIKPTKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWVG 214 (413)
Q Consensus 148 ~~~~~~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~~ 214 (413)
..++...+.+.|.+.+.+ ++|+++++|++++. + ++.+.+++.+|+++.||.||.|+|.++.
T Consensus 122 ~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~--~--~~~v~v~~~~g~~~~a~~vV~AdG~~S~ 182 (407)
T 3rp8_A 122 CPVSRAELQREMLDYWGR--DSVQFGKRVTRCEE--D--ADGVTVWFTDGSSASGDLLIAADGSHSA 182 (407)
T ss_dssp EEEEHHHHHHHHHHHHCG--GGEEESCCEEEEEE--E--TTEEEEEETTSCEEEESEEEECCCTTCS
T ss_pred EEEEHHHHHHHHHHhCCc--CEEEECCEEEEEEe--c--CCcEEEEEcCCCEEeeCEEEECCCcChH
Confidence 456778888888888766 88999999999998 7 4678899999989999999999999875
No 30
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.69 E-value=1.6e-16 Score=148.35 Aligned_cols=200 Identities=16% Similarity=0.113 Sum_probs=103.1
Q ss_pred eeecHHHHHHHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEE-eCCc--cEEEeCeEEEcCCcChhhhhhhhcCCC
Q 015072 148 GVIKPTKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVV-TSSG--EEFWGKKCVVTAGAWVGKLVKKISGLE 224 (413)
Q Consensus 148 ~~~~~~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~-~~~g--~~i~ad~vV~A~G~~~~~l~~~~~g~~ 224 (413)
..++...+.+.|.+.+.+.|++++++++|+++.. +++ ....+. ..++ .+++||.||.|+|.++. +.+.+ +..
T Consensus 97 ~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~--~~~-~~~~v~~~~~~~~~~~~a~~vIgAdG~~S~-vr~~~-g~~ 171 (397)
T 3oz2_A 97 YVLERDKFDKHLAALAAKAGADVWVKSPALGVIK--ENG-KVAGAKIRHNNEIVDVRAKMVIAADGFESE-FGRWA-GLK 171 (397)
T ss_dssp EEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEE--ETT-EEEEEEEEETTEEEEEEEEEEEECCCTTCH-HHHHH-TCG
T ss_pred EEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeee--ccc-eeeeeeecccccceEEEEeEEEeCCccccH-HHHHc-CCC
Confidence 3567788889999999999999999999999988 632 222222 1223 26899999999999874 43444 543
Q ss_pred cceeEEEEEE--EEEEecC-CCccccccCCCCceE-Ee--cCCCeeEecCCCCCCCeEEEEeCCCCcCCCCCCCCCCCcc
Q 015072 225 LPIQAVETSV--CYWRIKE-GDEADYAVGGDFPSF-AS--YGDPHVYGTPSLEYPGLIKIALHRGYLCDPDRRPWGPGPL 298 (413)
Q Consensus 225 ~p~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~-~~--~~~~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 298 (413)
.+..+..... ..+.... ..... ...+ .. ....+.+..|..+ +...++... ..+... ....
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~g~~~~~~~~~--~~~~vg~~~--~~~~~~----~~~~ 237 (397)
T 3oz2_A 172 SVILARNDIISALQYRMINVDVDPD------YTDFYLGSIAPAGYIWVFPKGE--GMANVGIGS--SINWIH----NRFE 237 (397)
T ss_dssp GGCCCGGGEEEEEEEEEESCCCCTT------EEEEECSTTSTTEEEEEEEEET--TEEEEEEEE--ETTTSC----SHHH
T ss_pred cccccceeeeeeEEEEeeccccCcc------cceeeeeccCCCceEEEeeccc--ceeEEEEee--ccchhh----hhhh
Confidence 3322221111 1122111 11100 1111 00 1122344444432 322222100 000000 0012
Q ss_pred hHHHHHHHHhhcCCCCCCCCCceeeeeeeeccCCCCeEEecCCCCCCCCEEEE-------eCCCccccccchHHHHHHHH
Q 015072 299 LDSLKELIQGRFAGRVDSSGPAATQLCMYSMTPDKDFVIDFLGGELGEDVVVA-------GGFSGHGFKMAPVVGRILAD 371 (413)
Q Consensus 299 ~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~t~d~~p~ig~~~~~~~~~~~~~-------~G~~~~G~~~a~~~a~~~a~ 371 (413)
.....+.+.+..|.+.+. ..+..+.+..+......|..+ ++++++ ..++|.|+.+|...|+.+|+
T Consensus 238 ~~~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~-------~~v~lvGDAA~~~~P~~G~Gi~~A~~~g~~~A~ 309 (397)
T 3oz2_A 238 LKNYLDRFIENHPGLKKG-QDIQLVTGGVSVSKVKMPITM-------PGLMLVGDAARLIDPITGGGIANAIVSGMYAAQ 309 (397)
T ss_dssp HHHHHHHHHHTCHHHHTS-EEEEEEEEEEECCCCCSCCEE-------TTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCcccccc-ceeeeeeccccccCcccceee-------eeEEEcccccccCCCCcchhHHHHHHHHHHHHH
Confidence 333334444445555542 345566676666554444433 455553 23578899998888777776
Q ss_pred HHH
Q 015072 372 LVL 374 (413)
Q Consensus 372 ~i~ 374 (413)
.|.
T Consensus 310 ~i~ 312 (397)
T 3oz2_A 310 VTK 312 (397)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 31
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.68 E-value=8.7e-15 Score=138.90 Aligned_cols=200 Identities=17% Similarity=0.054 Sum_probs=108.1
Q ss_pred CeeecHHHHHHHHHHHHHHcCCeEecCceEEEEEeeeccCCCc--EEEEeC-Ccc--EEEeCeEEEcCCcChhhhhhhhc
Q 015072 147 GGVIKPTKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGG--VTVVTS-SGE--EFWGKKCVVTAGAWVGKLVKKIS 221 (413)
Q Consensus 147 ~~~~~~~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~--~~v~~~-~g~--~i~ad~vV~A~G~~~~~l~~~~~ 221 (413)
...++...+.+.|.+.+.+.|++++++++|+++.. +++ .. +.+.+. +|+ +++||.||.|+|.++. +.+.+
T Consensus 94 ~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~--~~~-~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~-vr~~l- 168 (453)
T 3atr_A 94 GFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIF--EDG-YVKGAVLFNRRTNEELTVYSKVVVEATGYSRS-FRSKL- 168 (453)
T ss_dssp EEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEE--ETT-EEEEEEEEETTTTEEEEEECSEEEECCGGGCT-TGGGS-
T ss_pred cEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEE--ECC-EEEEEEEEEcCCCceEEEEcCEEEECcCCchh-hHHhc-
Confidence 35677889999999999999999999999999988 622 22 334333 665 7999999999999875 43444
Q ss_pred CCCcce----eE---EEEEEEEEEecCCCccccccCCCCc-eEEe---cCCCeeEecCCCCCCCeEEEEeCCCCcCCCCC
Q 015072 222 GLELPI----QA---VETSVCYWRIKEGDEADYAVGGDFP-SFAS---YGDPHVYGTPSLEYPGLIKIALHRGYLCDPDR 290 (413)
Q Consensus 222 g~~~p~----~~---~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~p~~~~~g~~~~~~~~~~~~~~~~ 290 (413)
+...|. .+ .......+....... ...+. .+.. ..+.++++.|..+ +.+.++........+
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~g~~~~~P~~~--~~~~vg~~~~~~~~~-- 239 (453)
T 3atr_A 169 PPELPITEDLDDKDADVAYREVLLTKEDIE-----DHDYLRIFIDQETSPGGYWWYFPKGK--NKVNVGLGIQGGMGY-- 239 (453)
T ss_dssp CTTSGGGCCCCGGGEEEEEEEEEEESSCCT-----TTTEEEEECCTTTSTTSCEEEEEEET--TEEEEEEEEESSSCC--
T ss_pred CCCCCcccCCCcccceeeeEEEEecCCCcc-----CCCeEEEEECCCCCCCcEEEEEECCC--CeEEEEEEecCCCCC--
Confidence 543321 11 111111222222110 00111 1111 1234566666533 333332211001111
Q ss_pred CCCCCCcchHHHHHHHHhhcCCCCCCCCCceeeeeeeeccCCCCeEEecCCCCCCCCEEEEeC--------CCccccccc
Q 015072 291 RPWGPGPLLDSLKELIQGRFAGRVDSSGPAATQLCMYSMTPDKDFVIDFLGGELGEDVVVAGG--------FSGHGFKMA 362 (413)
Q Consensus 291 ~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~t~d~~p~ig~~~~~~~~~~~~~~G--------~~~~G~~~a 362 (413)
. ...+.+.+.+.++.|.+.+. ..+..+.+..|.. .| .+....+++++ .| +.|.|+.+|
T Consensus 240 --~---~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~p~~---~~----~~~~~~~~v~l-vGDAAh~~~P~~G~G~~~A 305 (453)
T 3atr_A 240 --P---SIHEYYKKYLDKYAPDVDKS-KLLVKGGALVPTR---RP----LYTMAWNGIIV-IGDSGFTVNPVHGGGKGSA 305 (453)
T ss_dssp --C---CHHHHHHHHHHHHCTTEEEE-EEEEEEEEEEECS---SC----CSCSEETTEEE-CGGGGTCSCTTTCCCHHHH
T ss_pred --C---CHHHHHHHHHHhhhhhcCCC-eEEeccceeccCC---CC----CCceecCCEEE-EeCcccCCCCCccccHHHH
Confidence 0 13445555565555655532 2344455555431 11 11111245544 44 789999999
Q ss_pred hHHHHHHHHHHH
Q 015072 363 PVVGRILADLVL 374 (413)
Q Consensus 363 ~~~a~~~a~~i~ 374 (413)
...|..+|+.|.
T Consensus 306 i~da~~la~~l~ 317 (453)
T 3atr_A 306 MISGYCAAKAIL 317 (453)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999998888875
No 32
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.67 E-value=9.4e-17 Score=154.97 Aligned_cols=203 Identities=10% Similarity=0.044 Sum_probs=115.7
Q ss_pred CeeecHHHHHHHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcChhhhhhhhcCCCc-
Q 015072 147 GGVIKPTKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWVGKLVKKISGLEL- 225 (413)
Q Consensus 147 ~~~~~~~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~~~l~~~~~g~~~- 225 (413)
...+++..+.+.|.+.+.+.|++++++ +|+++.. ++++..+.|++.+|++++||.||.|+|.++.-+...+ +...
T Consensus 167 ~~~~~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~--~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~~~~~~~-g~~~~ 242 (511)
T 2weu_A 167 AYHFDADEVARYLSEYAIARGVRHVVD-DVQHVGQ--DERGWISGVHTKQHGEISGDLFVDCTGFRGLLINQTL-GGRFQ 242 (511)
T ss_dssp EEEECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEE--CTTSCEEEEEESSSCEEECSEEEECCGGGCCCCCCCT-CCCEE
T ss_pred eEEEcHHHHHHHHHHHHHHCCCEEEEC-eEeEEEE--cCCCCEEEEEECCCCEEEcCEEEECCCcchHHHHHHh-CCCCc
Confidence 456889999999999999999999999 9999988 6332346788888877999999999999885332322 4332
Q ss_pred ---ceeEEEEEE-EEEEecCCCccccccCCCCceEEecCCCeeEecCCCCCCCeEEEEeCCCCcCCCCCCCCCCCcchHH
Q 015072 226 ---PIQAVETSV-CYWRIKEGDEADYAVGGDFPSFASYGDPHVYGTPSLEYPGLIKIALHRGYLCDPDRRPWGPGPLLDS 301 (413)
Q Consensus 226 ---p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (413)
+..+....+ ..+.... .....+ ...........+|.+|..+ +...+.... .. .....+..+.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~--~~~~~~---~~~~~~~~~g~~~~~P~~~--~~~~g~~~~-----~~--~~~~~~~~~~ 308 (511)
T 2weu_A 243 SFSDVLPNNRAVALRVPREN--DEDMRP---YTTATAMSAGWMWTIPLFK--RDGNGYVYS-----DE--FISPEEAERE 308 (511)
T ss_dssp ECTTTCCCCEEEEEEEECSS--GGGCCS---SEEEEEETTEEEEEEECSS--EEEEEEEEC-----TT--TSCHHHHHHH
T ss_pred cccccCcccceEEEEeccCC--CCCCCc---ceeceecCCCcEEEEECCC--ceEEEEEEC-----CC--CCCHHHHHHH
Confidence 112222222 2222111 100111 1111222334577777643 222211111 00 0111113333
Q ss_pred HHHHHHhhcCCCCCCCCCceeeeeeeecc-CCCCeEEecCCCCCCCCEEEEeCCCccccccchHHHHHHHHHHHcC
Q 015072 302 LKELIQGRFAGRVDSSGPAATQLCMYSMT-PDKDFVIDFLGGELGEDVVVAGGFSGHGFKMAPVVGRILADLVLSG 376 (413)
Q Consensus 302 l~~~~~~~~p~~~~~~~~~~~~~g~~~~t-~d~~p~ig~~~~~~~~~~~~~~G~~~~G~~~a~~~a~~~a~~i~~~ 376 (413)
+.+.+ ...|.+.+ ...+..|.+.++.. .++.+++|- -......+.|+|+.+|...|..+|+.|.++
T Consensus 309 l~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~rv~liGD-------AAh~~~P~~g~G~~~a~~da~~La~~l~~~ 375 (511)
T 2weu_A 309 LRSTV-APGRDDLE-ANHIQMRIGRNERTWINNCVAVGL-------SAAFVEPLESTGIFFIQHAIEQLVKHFPGE 375 (511)
T ss_dssp HHHHH-CTTCTTSC-CEEEECCCEEESCSEETTEEECGG-------GTEECCGGGCCHHHHHHHHHHHHHHTCCCT
T ss_pred HHHHh-Cccccccc-ceeEEeeccccccccCCCEEEEec-------hhhccCccccccHHHHHHHHHHHHHHhccC
Confidence 33332 12232322 12344556665533 467777773 334556778999999999999999998744
No 33
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.64 E-value=4.3e-15 Score=142.16 Aligned_cols=205 Identities=9% Similarity=0.064 Sum_probs=108.4
Q ss_pred HHHHHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcCh-hhhhhhhcCC----Cccee
Q 015072 154 KAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWV-GKLVKKISGL----ELPIQ 228 (413)
Q Consensus 154 ~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~-~~l~~~~~g~----~~p~~ 228 (413)
.+.+.|.+.+.+ ++|+++++|++|.. + ++++.|++.+| ++.||+||+|++++. ..++... .. .++..
T Consensus 237 ~l~~~l~~~l~~--~~i~~~~~V~~i~~--~--~~~~~v~~~~g-~~~ad~vV~a~p~~~~~~ll~~~-~~~~~~~~~~~ 308 (475)
T 3lov_A 237 SLIERLEEVLER--SEIRLETPLLAISR--E--DGRYRLKTDHG-PEYADYVLLTIPHPQVVQLLPDA-HLPELEQLTTH 308 (475)
T ss_dssp HHHHHHHHHCSS--CEEESSCCCCEEEE--E--TTEEEEECTTC-CEEESEEEECSCHHHHHHHCTTS-CCHHHHTCCEE
T ss_pred HHHHHHHhhccC--CEEEcCCeeeEEEE--e--CCEEEEEECCC-eEECCEEEECCCHHHHHHHcCcc-CHHHHhcCCCC
Confidence 444444443322 79999999999998 7 45688999888 599999999999876 3444332 11 24555
Q ss_pred EEEEEEEEEEecCCCccccccCCCCceEEe-cCCC-ee----Ee---cCCCCC-CCeEEEEeCCCCcCCCCCCCCCCCcc
Q 015072 229 AVETSVCYWRIKEGDEADYAVGGDFPSFAS-YGDP-HV----YG---TPSLEY-PGLIKIALHRGYLCDPDRRPWGPGPL 298 (413)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~----~~---~p~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~ 298 (413)
++...++.++.+. .... ....+.. ..+. .+ |. .|.... ..++.... . ........+...++.
T Consensus 309 ~~~~v~l~~~~~~--~~~~----~g~g~l~~~~~~~~~~~~~~~s~~~~~~~p~~~~l~~~~-~-~~~~~~~~~~~~e~~ 380 (475)
T 3lov_A 309 STATVTMIFDQQQ--SLPI----EGTGFVVNRRAPYSITACTAIDQKWNHSAPDHTVLRAFV-G-RPGNDHLVHESDEVL 380 (475)
T ss_dssp EEEEEEEEEECCS--SCSS----SSSEEEECTTSSCSEEEEEEHHHHCTTTCTTEEEEEEEE-C-BTTBCGGGGSCHHHH
T ss_pred eEEEEEEEECCcC--CCCC----CCEEEEecCCCCCceEEEEEEcccCCCCCCCcEEEEEEe-C-CCCCCcccCCCHHHH
Confidence 6655555555222 1100 0111111 1111 01 10 011111 11121111 1 111111111122237
Q ss_pred hHHHHHHHHhhcCCCCCC-CCCceeeeeeee-ccCCCCeE---Eec-C-CCCCCCCEEEEe-CCCccccccchHHHHHHH
Q 015072 299 LDSLKELIQGRFAGRVDS-SGPAATQLCMYS-MTPDKDFV---IDF-L-GGELGEDVVVAG-GFSGHGFKMAPVVGRILA 370 (413)
Q Consensus 299 ~~~l~~~~~~~~p~~~~~-~~~~~~~~g~~~-~t~d~~p~---ig~-~-~~~~~~~~~~~~-G~~~~G~~~a~~~a~~~a 370 (413)
.+.+.+.+.++++...+. ...+..|....| ++++.... +.+ + ... +++|+++ .+.+.|+.-|...|+.+|
T Consensus 381 ~~~~~~~L~~~~g~~~~p~~~~v~~w~~a~p~~~~g~~~~~~~~~~~l~~~~--~~l~~aG~~~~g~g~~~a~~sG~~aA 458 (475)
T 3lov_A 381 QQAVLQDLEKICGRTLEPKQVIISRLMDGLPAYTVGHADRIQRVREEVLAQY--PGIYLAGLAYDGVGLPDCVASAKTMI 458 (475)
T ss_dssp HHHHHHHHHHHHSSCCCCSEEEEEEEEEEEECCCTTHHHHHHHHHHHHHHHS--TTEEECSTTTSCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCeEEEEEEcccCCCCCCCChHHHHHHHHHHHHhhC--CCEEEEccCCCCCCHHHHHHHHHHHH
Confidence 788888899998753321 001334554444 45543211 111 1 012 6899887 567789999999999999
Q ss_pred HHHHcC
Q 015072 371 DLVLSG 376 (413)
Q Consensus 371 ~~i~~~ 376 (413)
+.|+..
T Consensus 459 ~~i~~~ 464 (475)
T 3lov_A 459 ESIELE 464 (475)
T ss_dssp HHHHHT
T ss_pred HHHHHH
Confidence 999843
No 34
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.64 E-value=3.7e-15 Score=143.59 Aligned_cols=175 Identities=21% Similarity=0.266 Sum_probs=97.7
Q ss_pred CCCCCCCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCCCCcceecccCCccccchHHHHHHHHHHHHH
Q 015072 1 MEFSGENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESRTIRATYPEDYYHPMVLESSLLWEQAQS 80 (413)
Q Consensus 1 M~~~~~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (413)
|.+++.++||+|||||++|+++|+.|+++|++|+|||+.+..... . +..+.+ ............++.+..
T Consensus 1 M~~~~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~-~----g~~~~~-----~~~~~~l~~lgl~~~~~~ 70 (512)
T 3e1t_A 1 MSTRPEVFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQ-I----GESLLP-----ATVHGICAMLGLTDEMKR 70 (512)
T ss_dssp ----CEEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCC-S----CCBCCH-----HHHTTHHHHTTCHHHHHT
T ss_pred CCCCCccCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCCCC-C----CcccCc-----chHHHHHHHhCcHHHHHH
Confidence 554555699999999999999999999999999999998754211 0 000000 000000111111222211
Q ss_pred hcCCeeEeeeeeeeeCCCChHHHHHHHHHHHhCCCCccccCHHHHHHhcCCcccCCCCeEEEEecCCeeecHHHHHHHHH
Q 015072 81 EIGYKVYFKAHQFDMGPSENKSLRSVIASCRKNSVPHQVLDCRQVLQKYSGRIEIPENWVGVTTELGGVIKPTKAVSMFQ 160 (413)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 160 (413)
.+... .....+.+..... ..... +.. .. .........++...+.+.|.
T Consensus 71 -~~~~~-~~~~~~~~~~~~~-------------~~~~~----------~~~----~~---~~~~~~~~~v~r~~l~~~L~ 118 (512)
T 3e1t_A 71 -AGFPI-KRGGTFRWGKEPE-------------PWTFG----------FTR----HP---DDPYGFAYQVERARFDDMLL 118 (512)
T ss_dssp -TTCCE-ECEEEEECSSCSS-------------CEEEE----------SSS----SS---SSTTCCEEBCCHHHHHHHHH
T ss_pred -cCCcc-ccCceEEecCCcc-------------ccccc----------ccc----CC---CCCcceeeEecHHHHHHHHH
Confidence 11111 1111111110000 00000 000 00 00011234577889999999
Q ss_pred HHHHHcCCeEecCceEEEEEeeeccCC-CcEEEEeCCcc--EEEeCeEEEcCCcChhhhhhhh
Q 015072 161 TLAIKNGAVLRDNTEVKTVLKVKDDVR-GGVTVVTSSGE--EFWGKKCVVTAGAWVGKLVKKI 220 (413)
Q Consensus 161 ~~~~~~gv~i~~~~~V~~i~~~~~~~~-~~~~v~~~~g~--~i~ad~vV~A~G~~~~~l~~~~ 220 (413)
+.+.+.|++++++++|++|.. +++. .++.+.+.+|+ +++||.||.|+|.++. +.+.+
T Consensus 119 ~~a~~~Gv~i~~~~~V~~v~~--~~~~v~gv~~~~~dG~~~~i~ad~VI~AdG~~S~-vr~~l 178 (512)
T 3e1t_A 119 RNSERKGVDVRERHEVIDVLF--EGERAVGVRYRNTEGVELMAHARFIVDASGNRTR-VSQAV 178 (512)
T ss_dssp HHHHHTTCEEESSCEEEEEEE--ETTEEEEEEEECSSSCEEEEEEEEEEECCCTTCS-SGGGT
T ss_pred HHHHhCCCEEEcCCEEEEEEE--ECCEEEEEEEEeCCCCEEEEEcCEEEECCCcchH-HHHHc
Confidence 999999999999999999998 6321 13556666774 7999999999999874 44444
No 35
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.64 E-value=6e-15 Score=141.24 Aligned_cols=213 Identities=14% Similarity=0.075 Sum_probs=108.1
Q ss_pred HHHHHHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcChh-hhhhhhcC------CCc
Q 015072 153 TKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWVG-KLVKKISG------LEL 225 (413)
Q Consensus 153 ~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~~-~l~~~~~g------~~~ 225 (413)
..+.+.|.+.+.+.|++|+++++|++|.. +++ +.+.|++.++ ++.||+||+|++++.. .+++.... ..+
T Consensus 234 ~~l~~~l~~~l~~~g~~i~~~~~V~~i~~--~~~-~~~~v~~~~~-~~~ad~vv~a~p~~~~~~ll~~~~~~~~~~l~~~ 309 (477)
T 3nks_A 234 EMLPQALETHLTSRGVSVLRGQPVCGLSL--QAE-GRWKVSLRDS-SLEADHVISAIPASVLSELLPAEAAPLARALSAI 309 (477)
T ss_dssp THHHHHHHHHHHHTTCEEECSCCCCEEEE--CGG-GCEEEECSSC-EEEESEEEECSCHHHHHHHSCGGGHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEE--cCC-ceEEEEECCe-EEEcCEEEECCCHHHHHHhccccCHHHHHHHhcC
Confidence 47888899999889999999999999998 622 3378876544 5999999999998753 33322100 012
Q ss_pred ceeEEEEEEEEEEecCCCccccccCCCCceEEec-C-CCee----Ee---cCCCC---CCCeEEEEeCCCCc--CCCCCC
Q 015072 226 PIQAVETSVCYWRIKEGDEADYAVGGDFPSFASY-G-DPHV----YG---TPSLE---YPGLIKIALHRGYL--CDPDRR 291 (413)
Q Consensus 226 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~----~~---~p~~~---~~g~~~~~~~~~~~--~~~~~~ 291 (413)
+..+.... .+..+... + +...+ .+... . +..+ |. .|... ...++.....+.+. ......
T Consensus 310 ~~~~~~~v--~l~~~~~~---~-~~~~~-g~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~l~~~~gg~~~~~~~~~~~ 382 (477)
T 3nks_A 310 TAVSVAVV--NLQYQGAH---L-PVQGF-GHLVPSSEDPGVLGIVYDSVAFPEQDGSPPGLRVTVMLGGSWLQTLEASGC 382 (477)
T ss_dssp CEEEEEEE--EEEETTCC---C-SSCSS-EEECCTTTCSSEEEEECHHHHCGGGSTTTTCEEEEEEECHHHHHHHHHSSC
T ss_pred CCCcEEEE--EEEECCCC---C-CCCCc-eEEccCCCCCCceEEEEeccccCCCCCCCCceEEEEEECCccccccccccC
Confidence 33333222 22222211 1 00001 11100 0 0000 00 01000 01111111100000 000000
Q ss_pred CCCCCcchHHHHHHHHhhcCCCCCCC-CCceeee-eeeeccCCCCeEEecCCCC---CCCCEEEEeC-CCccccccchHH
Q 015072 292 PWGPGPLLDSLKELIQGRFAGRVDSS-GPAATQL-CMYSMTPDKDFVIDFLGGE---LGEDVVVAGG-FSGHGFKMAPVV 365 (413)
Q Consensus 292 ~~~~~~~~~~l~~~~~~~~p~~~~~~-~~~~~~~-g~~~~t~d~~p~ig~~~~~---~~~~~~~~~G-~~~~G~~~a~~~ 365 (413)
+...++..+.+.+.+.++++...+.. ..+..|- ++-.++++..+.++.+... ..+++++++. +.|.|+.-+...
T Consensus 383 ~~~~~~~~~~~~~~L~~~~g~~~~~~~~~v~rw~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~l~G~~~~G~gv~~a~~s 462 (477)
T 3nks_A 383 VLSQELFQQRAQEAAATQLGLKEMPSHCLVHLHKNCIPQYTLGHWQKLESARQFLTAHRLPLTLAGASYEGVAVNDCIES 462 (477)
T ss_dssp CCCHHHHHHHHHHHHHHHHCCCSCCSEEEEEEEEEEEECCBTTHHHHHHHHHHHHHHTTCSEEECSTTTSCCSHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhCCCCCCcEEEEEEcCCccCCCCCCHHHHHHHHHHHHHhcCCCEEEEccCCCCCcHHHHHHH
Confidence 01122266777778888886433210 0112333 4444566665543322110 0157888765 678899999999
Q ss_pred HHHHHHHHHcC
Q 015072 366 GRILADLVLSG 376 (413)
Q Consensus 366 a~~~a~~i~~~ 376 (413)
|+.+|+.|+..
T Consensus 463 g~~aA~~il~~ 473 (477)
T 3nks_A 463 GRQAAVSVLGT 473 (477)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhc
Confidence 99999999843
No 36
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.63 E-value=5.4e-15 Score=137.85 Aligned_cols=158 Identities=18% Similarity=0.238 Sum_probs=96.6
Q ss_pred CCCCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCCCCcc-eecccCCc-cc----cchHHHHHHHHHH
Q 015072 4 SGENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESRT-IRATYPED-YY----HPMVLESSLLWEQ 77 (413)
Q Consensus 4 ~~~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~~~~~~s~~~~~~-~~~~~~~~-~~----~~~~~~~~~~~~~ 77 (413)
+++++||+|||||++|+++|+.|+++|++|+|+|+.+..++.....+...+ +....... .+ ..+.....
T Consensus 24 ~~~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l----- 98 (417)
T 3v76_A 24 VAEKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSAL----- 98 (417)
T ss_dssp ----CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHH-----
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHH-----
Confidence 345689999999999999999999999999999998876432111111111 11100000 00 00000000
Q ss_pred HHHhcCCeeEeeeeeeeeCCCChHHHHHHHHHHHhCCCCccccCHHHHHHhcCCcccCCCCeEEEEecCCeeecHHHHHH
Q 015072 78 AQSEIGYKVYFKAHQFDMGPSENKSLRSVIASCRKNSVPHQVLDCRQVLQKYSGRIEIPENWVGVTTELGGVIKPTKAVS 157 (413)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
... ...+....+...+++..... ....+. ...+..+.+
T Consensus 99 --~~~-------------------~~~~~~~~~~~~Gi~~~~~~-----------------~g~~~~----~~~~~~l~~ 136 (417)
T 3v76_A 99 --ARY-------------------RPQDFVALVERHGIGWHEKT-----------------LGQLFC----DHSAKDIIR 136 (417)
T ss_dssp --HHS-------------------CHHHHHHHHHHTTCCEEECS-----------------TTEEEE----SSCHHHHHH
T ss_pred --Hhc-------------------CHHHHHHHHHHcCCCcEEee-----------------CCEEee----CCCHHHHHH
Confidence 000 01223333444444321111 011121 234578889
Q ss_pred HHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcCh
Q 015072 158 MFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWV 213 (413)
Q Consensus 158 ~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~ 213 (413)
.|.+.+++.|++++++++|++|.. + ++.+.|.+.+| +++||.||+|+|.++
T Consensus 137 ~L~~~l~~~Gv~i~~~~~V~~i~~--~--~~~~~V~~~~g-~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 137 MLMAEMKEAGVQLRLETSIGEVER--T--ASGFRVTTSAG-TVDAASLVVASGGKS 187 (417)
T ss_dssp HHHHHHHHHTCEEECSCCEEEEEE--E--TTEEEEEETTE-EEEESEEEECCCCSS
T ss_pred HHHHHHHHCCCEEEECCEEEEEEE--e--CCEEEEEECCc-EEEeeEEEECCCCcc
Confidence 999999999999999999999988 6 45688888888 599999999999997
No 37
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.61 E-value=2.7e-14 Score=139.18 Aligned_cols=65 Identities=17% Similarity=0.121 Sum_probs=51.7
Q ss_pred eeecHHHHHHHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeC------Cc---------cEEEeCeEEEcCCcC
Q 015072 148 GVIKPTKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTS------SG---------EEFWGKKCVVTAGAW 212 (413)
Q Consensus 148 ~~~~~~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~------~g---------~~i~ad~vV~A~G~~ 212 (413)
..++...+.+.|.+.+++.|++|+++++|+++.. ++++..+.|.+. +| .+++||.||.|+|.+
T Consensus 139 ~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~--~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~ 216 (584)
T 2gmh_A 139 YVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILF--HEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCH 216 (584)
T ss_dssp EECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEE--CTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTT
T ss_pred EEEeHHHHHHHHHHHHHHcCCEEEcCCEEEEEEE--cCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCC
Confidence 4566788999999999999999999999999998 632223346654 33 579999999999999
Q ss_pred hh
Q 015072 213 VG 214 (413)
Q Consensus 213 ~~ 214 (413)
+.
T Consensus 217 S~ 218 (584)
T 2gmh_A 217 GH 218 (584)
T ss_dssp CH
T ss_pred ch
Confidence 75
No 38
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.59 E-value=5.3e-14 Score=130.42 Aligned_cols=65 Identities=15% Similarity=0.103 Sum_probs=54.2
Q ss_pred eeecHHHHHHHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcChhhhhhhh
Q 015072 148 GVIKPTKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWVGKLVKKI 220 (413)
Q Consensus 148 ~~~~~~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~~~l~~~~ 220 (413)
..++...+.+.|.+.+.+.|++++++++|+++.. + + .|++.+|+++++|.||.|+|.++. +.+.+
T Consensus 102 ~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~---~--~v~~~~g~~~~ad~vV~AdG~~s~-vr~~l 166 (379)
T 3alj_A 102 RIMTRSHLHDALVNRARALGVDISVNSEAVAADP--V---G--RLTLQTGEVLEADLIVGADGVGSK-VRDSI 166 (379)
T ss_dssp EEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET--T---T--EEEETTSCEEECSEEEECCCTTCH-HHHHH
T ss_pred EEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe--C---C--EEEECCCCEEEcCEEEECCCccHH-HHHHh
Confidence 4567788999999999999999999999999977 4 2 677788888999999999999885 44444
No 39
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.59 E-value=6.1e-15 Score=137.81 Aligned_cols=71 Identities=10% Similarity=-0.011 Sum_probs=58.4
Q ss_pred eeecHHHHHHHHHHHHHHc-CCeEecCceEEEEEeeeccCCCcE--EEEeCCccEEEeCeEEEcCCcChhhhhhhhcCCC
Q 015072 148 GVIKPTKAVSMFQTLAIKN-GAVLRDNTEVKTVLKVKDDVRGGV--TVVTSSGEEFWGKKCVVTAGAWVGKLVKKISGLE 224 (413)
Q Consensus 148 ~~~~~~~~~~~l~~~~~~~-gv~i~~~~~V~~i~~~~~~~~~~~--~v~~~~g~~i~ad~vV~A~G~~~~~l~~~~~g~~ 224 (413)
..++...+.+.|.+.+.+. |++++++++|+++.. + ++.+ .|++.+|+++++|.||.|+|.++. +.+.+ +..
T Consensus 102 ~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~--~--~~~v~g~v~~~~g~~~~ad~vV~AdG~~s~-vr~~l-g~~ 175 (399)
T 2x3n_A 102 ILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQR--D--ERHAIDQVRLNDGRVLRPRVVVGADGIASY-VRRRL-LDI 175 (399)
T ss_dssp EECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEE--C--TTSCEEEEEETTSCEEEEEEEEECCCTTCH-HHHHT-SCC
T ss_pred ccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEE--c--CCceEEEEEECCCCEEECCEEEECCCCChH-HHHHh-CCC
Confidence 4567889999999999887 899999999999998 6 3456 788888888999999999999986 44444 543
No 40
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.59 E-value=5.2e-15 Score=143.45 Aligned_cols=214 Identities=8% Similarity=-0.031 Sum_probs=114.6
Q ss_pred ecCCeeecHHHHHHHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcChhhhhhhhcCC
Q 015072 144 TELGGVIKPTKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWVGKLVKKISGL 223 (413)
Q Consensus 144 ~~~~~~~~~~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~~~l~~~~~g~ 223 (413)
.+..+.+++..+.+.|.+.+.+.|++++.+ +|+++.. ++++..+.|.+.+|++++||.||.|+|.++.-+...+ +.
T Consensus 156 ~~~~~~i~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~--~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~~~~~~l-g~ 231 (538)
T 2aqj_A 156 MSHAWHFDAHLVADFLKRWAVERGVNRVVD-EVVDVRL--NNRGYISNLLTKEGRTLEADLFIDCSGMRGLLINQAL-KE 231 (538)
T ss_dssp SCCEEEECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEE--CTTSCEEEEEETTSCEECCSEEEECCGGGCCCCCCCT-CC
T ss_pred CCccEEEeHHHHHHHHHHHHHHCCCEEEEe-eEeEEEE--cCCCcEEEEEECCCcEEEeCEEEECCCCchhhHHHHh-CC
Confidence 344577899999999999999999999988 8999988 6332346788888877999999999999885332222 43
Q ss_pred Ccc----eeEEEEEEEEEEecCCCc-cccccCCCCceEEecCCCeeEecCCCCCCCeEEEEeCCCCcCCCCCCCCCCCcc
Q 015072 224 ELP----IQAVETSVCYWRIKEGDE-ADYAVGGDFPSFASYGDPHVYGTPSLEYPGLIKIALHRGYLCDPDRRPWGPGPL 298 (413)
Q Consensus 224 ~~p----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 298 (413)
..+ ..+... .+.+....... ..+.+ ...........++.+|..+ +...+.... . ++. .
T Consensus 232 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~g~~~~~p~~~--~~~~g~v~~-----~---~~~---~ 294 (538)
T 2aqj_A 232 PFIDMSDYLLCDS-AVASAVPNDDARDGVEP---YTSSIAMNSGWTWKIPMLG--RFGSGYVFS-----S---HFT---S 294 (538)
T ss_dssp CEEECTTTCCCCE-EEEEEEECCHHHHCCCS---SEEEEECSSEEEEEEEETT--EEEEEEEEC-----T---TTS---C
T ss_pred Cccccccccccce-EEEEecccCCcccCCCC---ceeeeecCCceEEEecCCC--ceEEEEEEc-----C---CCC---C
Confidence 211 011111 12222221100 00110 1111122234566666543 222211111 0 011 1
Q ss_pred hHHHHHHHHhhcCC--CCCCCCCceeeeeeee-ccCCCCeEEecCCCCCCCCEEEEeCCCccccccchHHHHHHHHHHHc
Q 015072 299 LDSLKELIQGRFAG--RVDSSGPAATQLCMYS-MTPDKDFVIDFLGGELGEDVVVAGGFSGHGFKMAPVVGRILADLVLS 375 (413)
Q Consensus 299 ~~~l~~~~~~~~p~--~~~~~~~~~~~~g~~~-~t~d~~p~ig~~~~~~~~~~~~~~G~~~~G~~~a~~~a~~~a~~i~~ 375 (413)
-+...+.+.+.++. +.+ ...+..+.+.++ +..++..++| +-......++|.|+.+|...|..|++.|.+
T Consensus 295 ~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~grvvliG-------DAAh~~~P~~gqG~~~a~~da~~La~~L~~ 366 (538)
T 2aqj_A 295 RDQATADFLKLWGLSDNQP-LNQIKFRVGRNKRAWVNNCVSIG-------LSSCFLEPLESTGIYFIYAALYQLVKHFPD 366 (538)
T ss_dssp HHHHHHHHHHHHTCCTTCC-CEEEECCCEEESCSEETTEEECG-------GGTEECCGGGSCHHHHHHHHHHHHHHTCCB
T ss_pred hHHHHHHHHHHhcCCCCCC-ceEEeeccccccccccCCEEEEc-------ccccccCcchhccHHHHHHHHHHHHHHhhc
Confidence 12333444455532 221 112223334332 2233444444 333445667899999999999999998874
Q ss_pred CCCCccccccc
Q 015072 376 GEAQGVELRHF 386 (413)
Q Consensus 376 ~~~~~~~~~~~ 386 (413)
+...+..++.|
T Consensus 367 ~~~~~~~l~~Y 377 (538)
T 2aqj_A 367 TSFDPRLSDAF 377 (538)
T ss_dssp TTCCHHHHHHH
T ss_pred cCCCHHHHHHH
Confidence 43322234455
No 41
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.58 E-value=1.6e-14 Score=140.21 Aligned_cols=66 Identities=17% Similarity=0.115 Sum_probs=55.5
Q ss_pred CeeecHHHHHHHHHHHHHHc-CCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcChhh
Q 015072 147 GGVIKPTKAVSMFQTLAIKN-GAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWVGK 215 (413)
Q Consensus 147 ~~~~~~~~~~~~l~~~~~~~-gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~~~ 215 (413)
...+++..+.+.|.+.+++. |++++++ +|+++.. ++++..+.|++.+|+++.||.||.|+|.++.-
T Consensus 188 ~~~~~~~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~--~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S~~ 254 (550)
T 2e4g_A 188 AWHFDAHLVADFLRRFATEKLGVRHVED-RVEHVQR--DANGNIESVRTATGRVFDADLFVDCSGFRGLL 254 (550)
T ss_dssp EEEECHHHHHHHHHHHHHHHSCCEEEEC-CEEEEEE--CTTSCEEEEEETTSCEEECSEEEECCGGGCCC
T ss_pred ceEEcHHHHHHHHHHHHHhcCCcEEEEC-eEeEEEE--cCCCCEEEEEECCCCEEECCEEEECCCCchhh
Confidence 45688899999999999988 9999999 9999987 63323467888888889999999999998854
No 42
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=99.57 E-value=9.1e-14 Score=137.11 Aligned_cols=74 Identities=19% Similarity=0.153 Sum_probs=55.0
Q ss_pred eeecHHHHHHHHHHHHHHcCC--eEecCceEEEEEeeeccC--CCcEEEEeC------Cc--cEEEeCeEEEcCCcChhh
Q 015072 148 GVIKPTKAVSMFQTLAIKNGA--VLRDNTEVKTVLKVKDDV--RGGVTVVTS------SG--EEFWGKKCVVTAGAWVGK 215 (413)
Q Consensus 148 ~~~~~~~~~~~l~~~~~~~gv--~i~~~~~V~~i~~~~~~~--~~~~~v~~~------~g--~~i~ad~vV~A~G~~~~~ 215 (413)
..++...+.+.|.+.+.+.|+ +++++++|++++. +++ ...+.++.. +| ++++||+||.|+|.++.
T Consensus 136 ~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~--~~~~~~~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S~- 212 (639)
T 2dkh_A 136 VILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKV--DHGAADYPVTVTLERCDAAHAGQIETVQARYVVGCDGARSN- 212 (639)
T ss_dssp EECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEE--CTTCSSCCEEEEEEECSGGGTTCEEEEEEEEEEECCCTTCH-
T ss_pred EeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEE--CCCCCcCCEEEEEEeccccCCCCeEEEEeCEEEECCCcchH-
Confidence 345667888999999999887 9999999999998 632 124666543 45 47999999999999985
Q ss_pred hhhhhcCCCc
Q 015072 216 LVKKISGLEL 225 (413)
Q Consensus 216 l~~~~~g~~~ 225 (413)
+.+.+ |+..
T Consensus 213 vR~~l-g~~~ 221 (639)
T 2dkh_A 213 VRRAI-GRQL 221 (639)
T ss_dssp HHHHT-TCCC
T ss_pred HHHHh-CCCC
Confidence 44444 5543
No 43
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=99.54 E-value=3.6e-13 Score=130.60 Aligned_cols=70 Identities=14% Similarity=0.223 Sum_probs=50.5
Q ss_pred eeecHHHHHHHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeCC---c--cEEEeCeEEEcCCcChhhhhhhhcC
Q 015072 148 GVIKPTKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSS---G--EEFWGKKCVVTAGAWVGKLVKKISG 222 (413)
Q Consensus 148 ~~~~~~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~---g--~~i~ad~vV~A~G~~~~~l~~~~~g 222 (413)
..++...+.+.|.+.+.+. ++++++|++++. + ++.+.+++.+ | ++++||+||.|+|.++. +.+.+ |
T Consensus 133 ~~i~~~~l~~~L~~~a~~~---v~~~~~v~~~~~--~--~~~v~v~~~~~~~G~~~~i~a~~vVgADG~~S~-vR~~l-g 203 (549)
T 2r0c_A 133 AICPQHWLAPLLAEAVGER---LRTRSRLDSFEQ--R--DDHVRATITDLRTGATRAVHARYLVACDGASSP-TRKAL-G 203 (549)
T ss_dssp EECCHHHHHHHHHHHHGGG---EECSEEEEEEEE--C--SSCEEEEEEETTTCCEEEEEEEEEEECCCTTCH-HHHHH-T
T ss_pred cccCHHHHHHHHHHHHHHh---cccCcEEEEEEE--e--CCEEEEEEEECCCCCEEEEEeCEEEECCCCCcH-HHHHc-C
Confidence 3445566777888877765 888999999998 7 3456665433 5 36999999999999985 44444 6
Q ss_pred CCcc
Q 015072 223 LELP 226 (413)
Q Consensus 223 ~~~p 226 (413)
+..+
T Consensus 204 ~~~~ 207 (549)
T 2r0c_A 204 IDAP 207 (549)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 5444
No 44
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.54 E-value=8.4e-14 Score=131.73 Aligned_cols=167 Identities=23% Similarity=0.238 Sum_probs=97.1
Q ss_pred CCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCCCCcceecccCCccccchHHHHHHHHHHHHHhcCCe
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESRTIRATYPEDYYHPMVLESSLLWEQAQSEIGYK 85 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (413)
+++||+|||||++|+++|+.|+++|.+|+|||+.+..++.....+...+. +... .. +..+...+...
T Consensus 25 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~---~~~~--~~--------~~~~~~~~~~~ 91 (447)
T 2i0z_A 25 MHYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCN---VTNR--LP--------LDEIVKHIPGN 91 (447)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCC---CEEC--SC--------HHHHHHTCTBT
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCcee---ccCc--cc--------HHHHHHHhccC
Confidence 45899999999999999999999999999999987653211111110000 0000 00 01111111100
Q ss_pred eEeeeeeeeeCCCChHHHHHHHHHHHhCCCCccccCHHHHHHhcCCcccCCCCeEEEEecCCeeecHHHHHHHHHHHHHH
Q 015072 86 VYFKAHQFDMGPSENKSLRSVIASCRKNSVPHQVLDCRQVLQKYSGRIEIPENWVGVTTELGGVIKPTKAVSMFQTLAIK 165 (413)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 165 (413)
.......+.. .. ..+..+++...|+++.... ....+... ..+..+++.|.+.+++
T Consensus 92 ~~~~~~~~~~--~~---~~~~~~~~~~~G~~~~~~~-----------------~g~~~p~~---~~~~~l~~~L~~~~~~ 146 (447)
T 2i0z_A 92 GRFLYSAFSI--FN---NEDIITFFENLGVKLKEED-----------------HGRMFPVS---NKAQSVVDALLTRLKD 146 (447)
T ss_dssp GGGGHHHHHH--SC---HHHHHHHHHHTTCCEEECG-----------------GGEEEETT---CCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHh--cC---HHHHHHHHHhcCCceEEee-----------------CCEEECCC---CCHHHHHHHHHHHHHH
Confidence 0000000000 00 1223334444444322111 00111111 1357888999999999
Q ss_pred cCCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcCh
Q 015072 166 NGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWV 213 (413)
Q Consensus 166 ~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~ 213 (413)
.|++++++++|++|.. ++ +..+.|++.+|++++||.||+|+|.++
T Consensus 147 ~GV~i~~~~~V~~i~~--~~-~~v~~V~~~~G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 147 LGVKIRTNTPVETIEY--EN-GQTKAVILQTGEVLETNHVVIAVGGKS 191 (447)
T ss_dssp TTCEEECSCCEEEEEE--ET-TEEEEEEETTCCEEECSCEEECCCCSS
T ss_pred CCCEEEeCcEEEEEEe--cC-CcEEEEEECCCCEEECCEEEECCCCCc
Confidence 9999999999999997 62 233778888887799999999999998
No 45
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.54 E-value=6.5e-14 Score=131.77 Aligned_cols=57 Identities=12% Similarity=0.148 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcChh
Q 015072 152 PTKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWVG 214 (413)
Q Consensus 152 ~~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~~ 214 (413)
+..+.+.|.+.+++.|++|+++++|++|.. + ++.+ |. .+|+++.||.||+|+|++..
T Consensus 188 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~--~--~~~v-V~-~~g~~~~ad~Vv~a~~~~~~ 244 (421)
T 3nrn_A 188 CKAVIDELERIIMENKGKILTRKEVVEINI--E--EKKV-YT-RDNEEYSFDVAISNVGVRET 244 (421)
T ss_dssp HHHHHHHHHHHHHTTTCEEESSCCEEEEET--T--TTEE-EE-TTCCEEECSEEEECSCHHHH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCeEEEEEE--E--CCEE-EE-eCCcEEEeCEEEECCCHHHH
Confidence 378889999999999999999999999998 7 4556 64 56667999999999998753
No 46
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.53 E-value=3.1e-13 Score=131.66 Aligned_cols=189 Identities=17% Similarity=0.155 Sum_probs=107.6
Q ss_pred CCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCCCCcceecccCCcc-ccchHHHHHHHHHHHHHhcCC
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESRTIRATYPEDY-YHPMVLESSLLWEQAQSEIGY 84 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~~~~~~s~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 84 (413)
.++||+|||||++|+++|+.|+++|++|+|||+.+..++ .+....+.+........ ...+......++..+.+....
T Consensus 120 ~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg--~s~~s~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~ 197 (566)
T 1qo8_A 120 ETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGG--NSMISAGGMNAVGTKQQTAHGVEDKVEWFIEDAMKGGRQ 197 (566)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCT--TGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTT
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCC--cccccCceeEccCCHHHHHhCCCCCHHHHHHHHHHhcCC
Confidence 468999999999999999999999999999999987753 33333333322111000 000000011122222221100
Q ss_pred eeEeeeeeeeeCCCChHHHHHHHHHHHhCCCCccccCHHHHHHhcCCcccCCCCeEEEEecCCeeecHHHHHHHHHHHHH
Q 015072 85 KVYFKAHQFDMGPSENKSLRSVIASCRKNSVPHQVLDCRQVLQKYSGRIEIPENWVGVTTELGGVIKPTKAVSMFQTLAI 164 (413)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 164 (413)
.. ....+.. -.+...+.++++...|+++..+. .++. ......+.+.++.+.+..+++.|.+.++
T Consensus 198 ~~--~~~~~~~---~~~~~~~~i~~l~~~Gv~~~~~~------~~~g-----~~~~r~~~~~~~~~~~~~l~~~L~~~~~ 261 (566)
T 1qo8_A 198 QN--DIKLVTI---LAEQSADGVQWLESLGANLDDLK------RSGG-----ARVDRTHRPHGGKSSGPEIIDTLRKAAK 261 (566)
T ss_dssp CS--CHHHHHH---HHHHHHHHHHHHHHTTCCCCEEE------CCTT-----CSSCCEEECSSSSCHHHHHHHHHHHHHH
T ss_pred CC--CHHHHHH---HHhccHHHHHHHHhcCCcccccc------ccCC-----CCCCceeecCCCCCCHHHHHHHHHHHHH
Confidence 00 0000000 00011233445555666543211 0111 1111223444555667889999999999
Q ss_pred HcCCeEecCceEEEEEeeeccCCC--cEEEEeCCcc--EEEeCeEEEcCCcChh
Q 015072 165 KNGAVLRDNTEVKTVLKVKDDVRG--GVTVVTSSGE--EFWGKKCVVTAGAWVG 214 (413)
Q Consensus 165 ~~gv~i~~~~~V~~i~~~~~~~~~--~~~v~~~~g~--~i~ad~vV~A~G~~~~ 214 (413)
+.|++|+++++|++|.. ++++. ++.+.+.+|+ ++.||.||+|+|.++.
T Consensus 262 ~~gv~i~~~~~v~~l~~--~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s~ 313 (566)
T 1qo8_A 262 EQGIDTRLNSRVVKLVV--NDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYGM 313 (566)
T ss_dssp HTTCCEECSEEEEEEEE--CTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCTT
T ss_pred hcCCEEEeCCEEEEEEE--CCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCccc
Confidence 99999999999999998 73122 2444444675 6899999999999985
No 47
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.53 E-value=1.2e-13 Score=128.27 Aligned_cols=158 Identities=16% Similarity=0.123 Sum_probs=95.9
Q ss_pred CCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCCCCcc-eecccCCc-c-c---cchHHHHHHHHHHHH
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESRT-IRATYPED-Y-Y---HPMVLESSLLWEQAQ 79 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~~~~~~s~~~~~~-~~~~~~~~-~-~---~~~~~~~~~~~~~~~ 79 (413)
+++||+|||||++|+++|+.|+++|.+|+|+|+.+..++.....+...+ +......+ . + ..+.....
T Consensus 3 ~~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l------- 75 (401)
T 2gqf_A 3 QYSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSAL------- 75 (401)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHH-------
T ss_pred CCCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHH-------
Confidence 3699999999999999999999999999999998765321110000000 01100000 0 0 00000000
Q ss_pred HhcCCeeEeeeeeeeeCCCChHHHHHHHHHHHhCCCCccccCHHHHHHhcCCcccCCCCeEEEEecCCeeecHHHHHHHH
Q 015072 80 SEIGYKVYFKAHQFDMGPSENKSLRSVIASCRKNSVPHQVLDCRQVLQKYSGRIEIPENWVGVTTELGGVIKPTKAVSMF 159 (413)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 159 (413)
.. . ...+..+++...|+++...+ ...++ +.. ++..+.+.+
T Consensus 76 ~~----------------~---~~~~~~~~~~~~Gi~~~~~~-----------------~g~~~-p~~---~~~~l~~~L 115 (401)
T 2gqf_A 76 AR----------------Y---TNWDFISLVAEQGITYHEKE-----------------LGQLF-CDE---GAEQIVEML 115 (401)
T ss_dssp HH----------------S---CHHHHHHHHHHTTCCEEECS-----------------TTEEE-ETT---CTHHHHHHH
T ss_pred Hh----------------C---CHHHHHHHHHhCCCceEECc-----------------CCEEc-cCC---CHHHHHHHH
Confidence 00 0 01223334444554422111 01112 211 567888999
Q ss_pred HHHHHHcCCeEecCceEEEEEeeeccC--CCcEEEEeCCccEEEeCeEEEcCCcCh
Q 015072 160 QTLAIKNGAVLRDNTEVKTVLKVKDDV--RGGVTVVTSSGEEFWGKKCVVTAGAWV 213 (413)
Q Consensus 160 ~~~~~~~gv~i~~~~~V~~i~~~~~~~--~~~~~v~~~~g~~i~ad~vV~A~G~~~ 213 (413)
.+.+++.|++++++++|+++.. +++ ++.+.|+++++ +++||.||+|+|.++
T Consensus 116 ~~~~~~~Gv~i~~~~~v~~i~~--~~~g~~~~~~v~~~~g-~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 116 KSECDKYGAKILLRSEVSQVER--IQNDEKVRFVLQVNST-QWQCKNLIVATGGLS 168 (401)
T ss_dssp HHHHHHHTCEEECSCCEEEEEE--CCSCSSCCEEEEETTE-EEEESEEEECCCCSS
T ss_pred HHHHHHCCCEEEeCCEEEEEEc--ccCcCCCeEEEEECCC-EEECCEEEECCCCcc
Confidence 9999999999999999999987 511 13478888777 599999999999998
No 48
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=99.52 E-value=2.2e-12 Score=127.47 Aligned_cols=37 Identities=30% Similarity=0.362 Sum_probs=33.8
Q ss_pred CCccEEEECCCHHHHHHHHHHHH-----cCCcEEEEcccCCC
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAK-----RGQKTLLLEQFDFL 42 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~-----~g~~V~lvE~~~~~ 42 (413)
.++||+|||||++|+++|..|++ .|++|+|||+.+..
T Consensus 7 ~~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~ 48 (665)
T 1pn0_A 7 SYCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTK 48 (665)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSC
T ss_pred CCCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCC
Confidence 36899999999999999999999 99999999997543
No 49
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.51 E-value=7.8e-13 Score=129.01 Aligned_cols=182 Identities=19% Similarity=0.189 Sum_probs=104.7
Q ss_pred CCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCCCCcceecccCCcc-ccchHHHHHHHHHHHHHhcCC
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESRTIRATYPEDY-YHPMVLESSLLWEQAQSEIGY 84 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~~~~~~s~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 84 (413)
.++||+|||||++|+++|+.|+++|++|+|||+.+..++. +....+.+........ ...+......++.++.+....
T Consensus 125 ~~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~--s~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~ 202 (571)
T 1y0p_A 125 DTVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGN--AKLAAGGMNAAWTDQQKAKKITDSPELMFEDTMKGGQN 202 (571)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTT--GGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTT
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCc--hhhcCceEEeCCCHHHHHhCCCCCHHHHHHHHHHhcCC
Confidence 3689999999999999999999999999999999876532 2222222221111000 000000001112222111000
Q ss_pred eeEeeeeeeeeCCCChHH-------HHHHHHHHHhCCCCccccCHHHHHHhcCCcccCCCCeEEEEecCCeeecHHHHHH
Q 015072 85 KVYFKAHQFDMGPSENKS-------LRSVIASCRKNSVPHQVLDCRQVLQKYSGRIEIPENWVGVTTELGGVIKPTKAVS 157 (413)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
..+.+. ..+.++++...|+++..+. ..+. ......+.+..+...+..+.+
T Consensus 203 ------------~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~------~~~g-----~~~~r~~~~~~g~~~g~~l~~ 259 (571)
T 1y0p_A 203 ------------INDPALVKVLSSHSKDSVDWMTAMGADLTDVG------MMGG-----ASVNRAHRPTGGAGVGAHVVQ 259 (571)
T ss_dssp ------------CSCHHHHHHHHHHHHHHHHHHHHTTCCCCEEE------CCTT-----CSSCCEEESTTTCCHHHHHHH
T ss_pred ------------CCCHHHHHHHHHccHHHHHHHHhcCCCCccCc------ccCC-----cCCCeeEecCCCCCCHHHHHH
Confidence 001111 1233444555565442110 0111 111123334444456788999
Q ss_pred HHHHHHHHcCCeEecCceEEEEEeeeccCCCc--EEEEeCCcc--EEEeCeEEEcCCcChh
Q 015072 158 MFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGG--VTVVTSSGE--EFWGKKCVVTAGAWVG 214 (413)
Q Consensus 158 ~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~--~~v~~~~g~--~i~ad~vV~A~G~~~~ 214 (413)
.|.+.+++.|++|+++++|++|.. ++++.. +.+...+|+ ++.||.||+|+|.++.
T Consensus 260 ~L~~~~~~~gv~i~~~~~v~~l~~--~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~~ 318 (571)
T 1y0p_A 260 VLYDNAVKRNIDLRMNTRGIEVLK--DDKGTVKGILVKGMYKGYYWVKADAVILATGGFAK 318 (571)
T ss_dssp HHHHHHHHTTCEEESSEEEEEEEE--CTTSCEEEEEEEETTTEEEEEECSEEEECCCCCTT
T ss_pred HHHHHHHhcCCEEEeCCEeeEeEE--cCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCccc
Confidence 999999999999999999999998 631222 444444665 6899999999999875
No 50
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.51 E-value=5.7e-12 Score=114.70 Aligned_cols=41 Identities=29% Similarity=0.379 Sum_probs=36.2
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGS 47 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~~~~~~ 47 (413)
++||+|||||++|+++|+.|+++|++|+|+|+.+..++...
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~ 42 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMS 42 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGC
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccce
Confidence 37999999999999999999999999999999877654433
No 51
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.51 E-value=5.3e-13 Score=128.51 Aligned_cols=58 Identities=16% Similarity=0.048 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcCh
Q 015072 153 TKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWV 213 (413)
Q Consensus 153 ~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~ 213 (413)
..+.+.|.+.+++.|++|+++++|++|.. ++ +....|++++|+++.||.||.+++.+.
T Consensus 221 ~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~--~~-~~~~gV~~~~g~~~~ad~VV~~a~~~~ 278 (501)
T 4dgk_A 221 GALVQGMIKLFQDLGGEVVLNARVSHMET--TG-NKIEAVHLEDGRRFLTQAVASNADVVH 278 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEE--ET-TEEEEEEETTSCEEECSCEEECCC---
T ss_pred cchHHHHHHHHHHhCCceeeecceeEEEe--eC-CeEEEEEecCCcEEEcCEEEECCCHHH
Confidence 67889999999999999999999999999 73 244568899999999999999999875
No 52
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.48 E-value=5.5e-13 Score=124.89 Aligned_cols=62 Identities=13% Similarity=0.154 Sum_probs=47.7
Q ss_pred eeecHHHHHHHHHHHHHH-cC-CeEecCceEEEEEeeeccCCCcEEEEeCC---c--cEEEeCeEEEcCCcChh
Q 015072 148 GVIKPTKAVSMFQTLAIK-NG-AVLRDNTEVKTVLKVKDDVRGGVTVVTSS---G--EEFWGKKCVVTAGAWVG 214 (413)
Q Consensus 148 ~~~~~~~~~~~l~~~~~~-~g-v~i~~~~~V~~i~~~~~~~~~~~~v~~~~---g--~~i~ad~vV~A~G~~~~ 214 (413)
..++...+.+.|.+.+.+ .| ++++++++|+++.. + +++.+.+.+ | ++++||.||.|+|.++.
T Consensus 102 ~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~--~---~~v~v~~~~~~~g~~~~~~ad~vV~AdG~~S~ 170 (410)
T 3c96_A 102 YSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE--R---DGRVLIGARDGHGKPQALGADVLVGADGIHSA 170 (410)
T ss_dssp EEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE--E---TTEEEEEEEETTSCEEEEEESEEEECCCTTCH
T ss_pred eeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec--C---CccEEEEecCCCCCceEEecCEEEECCCccch
Confidence 345667888888888876 36 58999999999987 4 345565543 6 47999999999999885
No 53
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.46 E-value=9.4e-13 Score=126.10 Aligned_cols=165 Identities=21% Similarity=0.233 Sum_probs=99.8
Q ss_pred CCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCCCCcceecccCCccccchHHHHHHHHHHHHHh--cC
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESRTIRATYPEDYYHPMVLESSLLWEQAQSE--IG 83 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 83 (413)
.++||+|||||++|+++|+.|+++|++|+|||+++..+++. ......|....-. ..
T Consensus 106 ~~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~----------------------~~~~g~w~~~~~~~~~~ 163 (549)
T 3nlc_A 106 LTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERT----------------------KDTFGFWRKRTLNPESN 163 (549)
T ss_dssp CCCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHH----------------------HHHHHHHHHCCCCTTSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccc----------------------cchhccccccccccccc
Confidence 34899999999999999999999999999999986432100 0000011100000 00
Q ss_pred Cee------EeeeeeeeeCCCC-hHHHHHHHHHHHhCCCCccccCHHHHHHhcCCcccCCCCeEEEEecCCeeecHHHHH
Q 015072 84 YKV------YFKAHQFDMGPSE-NKSLRSVIASCRKNSVPHQVLDCRQVLQKYSGRIEIPENWVGVTTELGGVIKPTKAV 156 (413)
Q Consensus 84 ~~~------~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (413)
..+ .+..+.+...... ........+.+...+.+...... . .+..+......+.
T Consensus 164 i~~g~gGag~~sdgkl~~~i~~~~~~~~~v~~~~~~~G~~~~i~~~--------~------------~p~~G~~~~~~l~ 223 (549)
T 3nlc_A 164 VQFGEGGAGTFSDGKLYSQVKDPNFYGRKVITEFVEAGAPEEILYV--------S------------KPHIGTFKLVTMI 223 (549)
T ss_dssp SSSSTTGGGTTSCCCCCCCSCCTTCHHHHHHHHHHHTTCCGGGGTB--------S------------SCCCCHHHHHHHH
T ss_pred ceeccCCcccccCCceEEEeccccccHHHHHHHHHHcCCCceEeec--------c------------ccccccchHHHHH
Confidence 000 0000111110001 11113344444555554322210 0 1222344557788
Q ss_pred HHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcChhh
Q 015072 157 SMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWVGK 215 (413)
Q Consensus 157 ~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~~~ 215 (413)
+.|.+.+++.|++++++++|++|.. +++ ..+.|++.+|+++.||.||+|+|.++..
T Consensus 224 ~~L~~~l~~~Gv~I~~~t~V~~I~~--~~~-~v~gV~l~~G~~i~Ad~VVlA~G~~s~~ 279 (549)
T 3nlc_A 224 EKMRATIIELGGEIRFSTRVDDLHM--EDG-QITGVTLSNGEEIKSRHVVLAVGHSARD 279 (549)
T ss_dssp HHHHHHHHHTTCEEESSCCEEEEEE--SSS-BEEEEEETTSCEEECSCEEECCCTTCHH
T ss_pred HHHHHHHHhcCCEEEeCCEEEEEEE--eCC-EEEEEEECCCCEEECCEEEECCCCChhh
Confidence 8999999999999999999999988 622 3456888888889999999999999863
No 54
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.46 E-value=1.8e-12 Score=126.22 Aligned_cols=199 Identities=16% Similarity=0.155 Sum_probs=105.9
Q ss_pred CCCCCCCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCCCCcceecccCCccccchHHHHHHHHHHHHH
Q 015072 1 MEFSGENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESRTIRATYPEDYYHPMVLESSLLWEQAQS 80 (413)
Q Consensus 1 M~~~~~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (413)
|.....++||+|||||++|+++|+.|+++|.+|+||||....++ .+....|.+............. ..+.+..+
T Consensus 1 m~~~~~~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~~~g--~s~~a~GGi~~~~~~~~~ds~~----~~~~d~~~ 74 (588)
T 2wdq_A 1 MKLPVREFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRS--HTVSAQGGITVALGNTHEDNWE----WHMYDTVK 74 (588)
T ss_dssp CCSCEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGS--GGGGCCSCEECCCCSSSCCCHH----HHHHHHHH
T ss_pred CCCccccCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCCCC--cchhhCCccEEcCCCCCCCCHH----HHHHHHHH
Confidence 55455679999999999999999999999999999999876532 2222222222211110000000 01111111
Q ss_pred hcCCeeEeeeeeeeeCCCChHHHHHHHHHHHhCCCCccccCHHHHH-HhcCCcccCC----CCeEEEEecCCeeecHHHH
Q 015072 81 EIGYKVYFKAHQFDMGPSENKSLRSVIASCRKNSVPHQVLDCRQVL-QKYSGRIEIP----ENWVGVTTELGGVIKPTKA 155 (413)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~-~~~p~~~~~~----~~~~~~~~~~~~~~~~~~~ 155 (413)
...... ....+.. -.+...+.++++...|+++.......+. ..++. .... ......+ ..+ ..+..+
T Consensus 75 ~g~~~~--d~~~v~~---~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~~g-~~~~~~~~~~~r~~~-~~d--~~g~~l 145 (588)
T 2wdq_A 75 GSDYIG--DQDAIEY---MCKTGPEAILELEHMGLPFSRLDDGRIYQRPFGG-QSKNFGGEQAARTAA-AAD--RTGHAL 145 (588)
T ss_dssp HTTTCS--CHHHHHH---HHHHHHHHHHHHHHTTCCCCBCTTSSBCEECCTT-CBSTTTCSBCCCEEC-STT--CHHHHH
T ss_pred hcCCCC--CHHHHHH---HHHhHHHHHHHHHHcCCCcccCCCCcEeeeecCC-ccccccccCcceEEE-cCC--CCHHHH
Confidence 100000 0000000 0001123445556667765443221110 00111 0000 0011111 111 134678
Q ss_pred HHHHHHHHHHcCCeEecCceEEEEEeeeccCCCc--EEEEe-CCcc--EEEeCeEEEcCCcChhhh
Q 015072 156 VSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGG--VTVVT-SSGE--EFWGKKCVVTAGAWVGKL 216 (413)
Q Consensus 156 ~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~--~~v~~-~~g~--~i~ad~vV~A~G~~~~~l 216 (413)
++.|.+.+.+.|++|+++++|++|.. ++++.. +.+.. .+|+ ++.|+.||+|||.++..+
T Consensus 146 ~~~L~~~~~~~gv~i~~~~~v~~L~~--~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~~~y 209 (588)
T 2wdq_A 146 LHTLYQQNLKNHTTIFSEWYALDLVK--NQDGAVVGCTALCIETGEVVYFKARATVLATGGAGRIY 209 (588)
T ss_dssp HHHHHHHHHHTTCEEEETEEEEEEEE--CTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCCGGGS
T ss_pred HHHHHHHHHhCCCEEEeCcEEEEEEE--CCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCCcccc
Confidence 88999999999999999999999988 622233 33332 5565 689999999999988643
No 55
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=99.46 E-value=8.4e-13 Score=127.53 Aligned_cols=65 Identities=14% Similarity=0.153 Sum_probs=53.6
Q ss_pred CeeecHHHHHHHHHHHHHH-cCCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcChh
Q 015072 147 GGVIKPTKAVSMFQTLAIK-NGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWVG 214 (413)
Q Consensus 147 ~~~~~~~~~~~~l~~~~~~-~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~~ 214 (413)
...+++..+.+.|.+.+.+ .|++++++ +|+++.. ++++..+.|++.+|++++||.||.|+|.++.
T Consensus 169 ~~~~~r~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~--~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~ 234 (526)
T 2pyx_A 169 GYHLNAAKFSQLLTEHCTQKLGVTHIRD-HVSQIIN--NQHGDIEKLITKQNGEISGQLFIDCTGAKSL 234 (526)
T ss_dssp EEEECHHHHHHHHHHHHHHTSCCEEEEC-CEEEEEE--CTTSCEEEEEESSSCEEECSEEEECSGGGCC
T ss_pred eEEEcHHHHHHHHHHHHHhcCCCEEEEe-EEEEEEe--cCCCcEEEEEECCCCEEEcCEEEECCCcchH
Confidence 4567889999999999998 89999998 6999988 6322345677777767999999999999875
No 56
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=99.45 E-value=3.8e-12 Score=119.21 Aligned_cols=63 Identities=13% Similarity=0.078 Sum_probs=46.3
Q ss_pred cHHHHHHHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcChhhhhhhh
Q 015072 151 KPTKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWVGKLVKKI 220 (413)
Q Consensus 151 ~~~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~~~l~~~~ 220 (413)
+-..+.+.|.+. .+..++++++|++++. .+ ++.+.++++||++++||.||-|.|.+|. +.+.+
T Consensus 110 ~R~~L~~~L~~~---~~~~v~~~~~v~~~~~--~~-~~~v~v~~~dG~~~~adlvVgADG~~S~-vR~~l 172 (412)
T 4hb9_A 110 SRTELKEILNKG---LANTIQWNKTFVRYEH--IE-NGGIKIFFADGSHENVDVLVGADGSNSK-VRKQY 172 (412)
T ss_dssp EHHHHHHHHHTT---CTTTEECSCCEEEEEE--CT-TSCEEEEETTSCEEEESEEEECCCTTCH-HHHHH
T ss_pred eHHHHHHHHHhh---ccceEEEEEEEEeeeE--cC-CCeEEEEECCCCEEEeeEEEECCCCCcc-hHHHh
Confidence 334455544433 3457889999999987 53 3568899999999999999999999884 43444
No 57
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.45 E-value=3.6e-13 Score=129.54 Aligned_cols=59 Identities=19% Similarity=0.189 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEE--EeCCcc-EEEeC-eEEEcCCcChh
Q 015072 154 KAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTV--VTSSGE-EFWGK-KCVVTAGAWVG 214 (413)
Q Consensus 154 ~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v--~~~~g~-~i~ad-~vV~A~G~~~~ 214 (413)
.+++.|.+.+++.|++|+++++|++|.. ++++..+.| ...++. +++|+ .||+|||.|+.
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~--~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~~ 265 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVT--DDTGRVVGIVAKQYGKEVAVRARRGVVLATGSFAY 265 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEE--CTTCCEEEEEEEETTEEEEEEEEEEEEECCCCCTT
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEE--CCCCcEEEEEEEECCcEEEEEeCCeEEEeCCChhh
Confidence 7889999999999999999999999998 632233333 333222 68995 99999999973
No 58
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.45 E-value=5.8e-13 Score=128.63 Aligned_cols=49 Identities=27% Similarity=0.359 Sum_probs=41.6
Q ss_pred CCCCCCCccEEEECCCHHHHHHHHHHHHc-CCcEEEEcccCCCCCCCCCC
Q 015072 1 MEFSGENFDVIVVGAGIMGSSAAYQLAKR-GQKTLLLEQFDFLHHRGSSH 49 (413)
Q Consensus 1 M~~~~~~~dvvIIGgG~aG~~~A~~L~~~-g~~V~lvE~~~~~~~~~~s~ 49 (413)
|+...+++||+|||||++||++|++|+++ |++|+|+|+.+..||...|.
T Consensus 4 Ms~p~~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~~~T~ 53 (513)
T 4gde_A 4 MTHPDISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLASTD 53 (513)
T ss_dssp --CCSEEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGGGCEE
T ss_pred CCCCCCCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCCeeeE
Confidence 44445579999999999999999999985 99999999999998877663
No 59
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.44 E-value=2.9e-13 Score=126.15 Aligned_cols=67 Identities=12% Similarity=-0.101 Sum_probs=51.6
Q ss_pred ecHHHHHHHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEe-CCcc--EEEeCeEEEcCCcChhhhhhhh
Q 015072 150 IKPTKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVT-SSGE--EFWGKKCVVTAGAWVGKLVKKI 220 (413)
Q Consensus 150 ~~~~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~-~~g~--~i~ad~vV~A~G~~~~~l~~~~ 220 (413)
++...+.+.|.+.+.+.|++++++++|+++.. +++ +.+.|++ .+|+ +++||.||.|+|.++. +.+.+
T Consensus 100 ~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~--~~~-~~~~v~~~~~g~~~~~~a~~vV~AdG~~S~-vr~~l 169 (394)
T 1k0i_A 100 YGQTEVTRDLMEAREACGATTVYQAAEVRLHD--LQG-ERPYVTFERDGERLRLDCDYIAGCDGFHGI-SRQSI 169 (394)
T ss_dssp CCHHHHHHHHHHHHHHTTCEEESSCEEEEEEC--TTS-SSCEEEEEETTEEEEEECSEEEECCCTTCS-TGGGS
T ss_pred echHHHHHHHHHHHHhcCCeEEeceeEEEEEE--ecC-CceEEEEecCCcEEEEEeCEEEECCCCCcH-HHHhc
Confidence 34467778888888888999999999999988 632 3456665 5776 6999999999999885 43433
No 60
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=99.42 E-value=6.5e-13 Score=130.44 Aligned_cols=193 Identities=15% Similarity=0.172 Sum_probs=100.7
Q ss_pred CCCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCCCCcceecccCCcc---ccchHHHHHHHHHHHHHh
Q 015072 5 GENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESRTIRATYPEDY---YHPMVLESSLLWEQAQSE 81 (413)
Q Consensus 5 ~~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~~~~~~s~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 81 (413)
..++||+|||||++|+++|+.|+++|.+|+||||....+ +.+....|.+........ .... ...+.+..+.
T Consensus 3 ~~~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~~~~--g~s~~a~GGi~a~~~~~~~g~~ds~----~~~~~dt~~~ 76 (660)
T 2bs2_A 3 VQYCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVKR--SHSAAAQGGMQASLGNSKMSDGDNE----DLHFMDTVKG 76 (660)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHTTTCCEEEECSSCGGG--SGGGGCCSCEECCCCCSGGGTTCCH----HHHHHHHHHH
T ss_pred cccccEEEECchHHHHHHHHHHHHCCCcEEEEeccCCCC--CcccccCCCeEeccCCcccCCCCCH----HHHHHHHHHh
Confidence 346899999999999999999999999999999987653 222222222222111100 0000 0011111111
Q ss_pred cCCeeEeeeeeeeeCCCChHHHHHHHHHHHhCCCCccc-----------------cCHHHHHHhcCCcccCCCCeEEEEe
Q 015072 82 IGYKVYFKAHQFDMGPSENKSLRSVIASCRKNSVPHQV-----------------LDCRQVLQKYSGRIEIPENWVGVTT 144 (413)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-----------------l~~~~~~~~~p~~~~~~~~~~~~~~ 144 (413)
.+..+....... + .....+.+.++...|+++.. ++.+++...+.. ....+...
T Consensus 77 g~~~~d~~~v~~-~----~~~s~~~i~~L~~~Gv~f~~~~~G~~~~~~~g~~~~~l~~~e~~~~~~~-----~~~gg~~~ 146 (660)
T 2bs2_A 77 SDWGCDQKVARM-F----VNTAPKAIRELAAWGVPWTRIHKGDRMAIINAQKTTITEEDFRHGLIHS-----RDFGGTKK 146 (660)
T ss_dssp TTTCSCHHHHHH-H----HHHHHHHHHHHHHTTCCCCBCCSEEEECCCSSCCCEEEECGGGTTSBCC-----BCCTTCSS
T ss_pred cCCCCCHHHHHH-H----HHHHHHHHHHHHHcCCCceecCCCcccccccccccccccchhhhhhhcc-----cccccccc
Confidence 110000000000 0 00012233444555554322 222222111110 00001000
Q ss_pred cCCee---ecHHHHHHHHHHHHHHcCCeEecCceEEEEEeeeccCC-CcEEEE-eCCcc--EEEeCeEEEcCCcChhh
Q 015072 145 ELGGV---IKPTKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVR-GGVTVV-TSSGE--EFWGKKCVVTAGAWVGK 215 (413)
Q Consensus 145 ~~~~~---~~~~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~-~~~~v~-~~~g~--~i~ad~vV~A~G~~~~~ 215 (413)
+.... ..+..++..|.+.+.+.|++|++++.|++|.. +++. .++.+. +.+|+ .+.|+.||+|||+++..
T Consensus 147 ~R~~~~~d~tG~~l~~~L~~~a~~~gv~i~~~~~v~~L~~--~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~ 222 (660)
T 2bs2_A 147 WRTCYTADATGHTMLFAVANECLKLGVSIQDRKEAIALIH--QDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYGRI 222 (660)
T ss_dssp CCEECSTTCHHHHHHHHHHHHHHHHTCEEECSEEEEEEEE--ETTEEEEEEEEETTTCCEEEEECSEEEECCCCCGGG
T ss_pred ceeEeeCCCCHHHHHHHHHHHHHhCCCEEEECcEEEEEEe--cCCEEEEEEEEECCCCcEEEEEcCEEEEccCcchhh
Confidence 10000 12467889999999889999999999999987 6321 133333 25665 58999999999999853
No 61
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.41 E-value=6.8e-12 Score=116.95 Aligned_cols=58 Identities=10% Similarity=-0.032 Sum_probs=47.1
Q ss_pred cHHHHHHHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcChh
Q 015072 151 KPTKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWVG 214 (413)
Q Consensus 151 ~~~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~~ 214 (413)
+...+.+.|.+.+ .|++++++++|+++.. + ++.+.+++.+|+++++|.||.|+|.++.
T Consensus 97 ~~~~l~~~L~~~~--~~~~i~~~~~v~~i~~--~--~~~v~v~~~~g~~~~ad~vV~AdG~~S~ 154 (397)
T 2vou_A 97 SYDSIYGGLYELF--GPERYHTSKCLVGLSQ--D--SETVQMRFSDGTKAEANWVIGADGGASV 154 (397)
T ss_dssp EHHHHHHHHHHHH--CSTTEETTCCEEEEEE--C--SSCEEEEETTSCEEEESEEEECCCTTCH
T ss_pred CHHHHHHHHHHhC--CCcEEEcCCEEEEEEe--c--CCEEEEEECCCCEEECCEEEECCCcchh
Confidence 3345666666554 5899999999999998 7 4568888888888999999999999885
No 62
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.41 E-value=2.4e-12 Score=125.31 Aligned_cols=189 Identities=17% Similarity=0.191 Sum_probs=102.4
Q ss_pred CCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCCCCcceecccCCcc-ccchHHHHHHHHHHHHHhcCC
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESRTIRATYPEDY-YHPMVLESSLLWEQAQSEIGY 84 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~~~~~~s~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 84 (413)
..+||+|||+|++|+++|+.|+++|++|+|+|+.+..++. +....+.+........ ...+......++.++.+. +.
T Consensus 125 ~~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~--~~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~-g~ 201 (572)
T 1d4d_A 125 ETTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGN--TKLAAGGMNAAETKPQAKLGIEDKKQIMIDDTMKG-GR 201 (572)
T ss_dssp EECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTT--GGGCCSCEECCSSSTTGGGTCCCCTHHHHHHHHHH-TT
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcc--hhhhCCeeEccCCHHHHHhCCCCCHHHHHHHHHHh-cC
Confidence 3579999999999999999999999999999999877532 2222222221111000 000000001122222211 10
Q ss_pred eeEeeeeeeeeCCCChHHHHHHHHHHHhCCCCccccCHHHHHHhcCCcccCCCCeEEEEecCCeeecHHHHHHHHHHHHH
Q 015072 85 KVYFKAHQFDMGPSENKSLRSVIASCRKNSVPHQVLDCRQVLQKYSGRIEIPENWVGVTTELGGVIKPTKAVSMFQTLAI 164 (413)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 164 (413)
.. .....+... .+.....++++...|+++..+. .+.. ......+.+..+......+.+.|.+.++
T Consensus 202 ~~-~~~~~v~~~---~~~~~~~i~~l~~~Gv~~~~~~------~~gg-----~~~~r~~~~~~~~~~g~~l~~~L~~~~~ 266 (572)
T 1d4d_A 202 NI-NDPELVKVL---ANNSSDSIDWLTSMGADMTDVG------RMGG-----ASVNRSHRPTGGAGVGAHVAQVLWDNAV 266 (572)
T ss_dssp TC-SCHHHHHHH---HHTHHHHHHHHHHHTCCCCEEE------CCTT-----CSSCCEEESTTTCCHHHHHHHHHHHHHH
T ss_pred CC-CCHHHHHHH---HHccHHHHHHHHhcCCcccccc------ccCC-----CcCCeeEecCCCCCCHHHHHHHHHHHHH
Confidence 00 000000000 0001223344444455432211 0111 0111122333344456788999999999
Q ss_pred HcCCeEecCceEEEEEeeeccCCC--cEEEEeCCcc--EEEeCeEEEcCCcChh
Q 015072 165 KNGAVLRDNTEVKTVLKVKDDVRG--GVTVVTSSGE--EFWGKKCVVTAGAWVG 214 (413)
Q Consensus 165 ~~gv~i~~~~~V~~i~~~~~~~~~--~~~v~~~~g~--~i~ad~vV~A~G~~~~ 214 (413)
+.|++|+++++|++|.. ++++. ++.+.+.+|+ ++.||.||+|+|.++.
T Consensus 267 ~~gv~i~~~t~v~~l~~--~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~~ 318 (572)
T 1d4d_A 267 KRGTDIRLNSRVVRILE--DASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFAK 318 (572)
T ss_dssp HTTCEEESSEEEEEEEE--C--CCEEEEEEEETTTEEEEEECSEEEECCCCCTT
T ss_pred HcCCeEEecCEEEEEEE--CCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCcc
Confidence 99999999999999988 63122 3444444664 6899999999999874
No 63
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.41 E-value=1.3e-12 Score=119.95 Aligned_cols=65 Identities=9% Similarity=0.168 Sum_probs=53.2
Q ss_pred cHHHHHHHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEE-EEeCCccEEEeCeEEEcCCcChhhhhhhh
Q 015072 151 KPTKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVT-VVTSSGEEFWGKKCVVTAGAWVGKLVKKI 220 (413)
Q Consensus 151 ~~~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~-v~~~~g~~i~ad~vV~A~G~~~~~l~~~~ 220 (413)
....+.+.+.+.+++.|++++++++|+++.. + ++.+. |+++++ ++.+|+||+|+|.++.+..+.+
T Consensus 74 ~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~--~--~~~~~~v~~~~g-~~~~d~vV~AtG~~~~~~~~~~ 139 (357)
T 4a9w_A 74 ARAEVLAYLAQYEQKYALPVLRPIRVQRVSH--F--GERLRVVARDGR-QWLARAVISATGTWGEAYTPEY 139 (357)
T ss_dssp BHHHHHHHHHHHHHHTTCCEECSCCEEEEEE--E--TTEEEEEETTSC-EEEEEEEEECCCSGGGBCCCCC
T ss_pred CHHHHHHHHHHHHHHcCCEEEcCCEEEEEEE--C--CCcEEEEEeCCC-EEEeCEEEECCCCCCCCCCCCC
Confidence 3467778888888889999999999999998 6 45677 888888 5999999999999876544443
No 64
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.40 E-value=2.1e-12 Score=124.55 Aligned_cols=186 Identities=16% Similarity=0.136 Sum_probs=88.6
Q ss_pred CCCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCCCCcceecccCCccccchHHHHHH-HHHHHHHhcC
Q 015072 5 GENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESRTIRATYPEDYYHPMVLESSL-LWEQAQSEIG 83 (413)
Q Consensus 5 ~~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 83 (413)
..++||+|||||++|+++|+.|++ |.+|+||||....+ +++....|.+...... ..+.+ .+.+..+...
T Consensus 6 ~~~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~--g~s~~a~Ggi~~~~~~-------~ds~~~~~~d~l~~g~ 75 (540)
T 1chu_A 6 EHSCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTE--GSTFYAQGGIAAVFDE-------TDSIDSHVEDTLIAGA 75 (540)
T ss_dssp SEECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC---------------CCS-------HHHHHHHHHHHHHHTT
T ss_pred CCCCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCC--CChhhcCCCEEEecCC-------CCCHHHHHHHHHHhhc
Confidence 346899999999999999999999 99999999987654 3333333333322211 01111 1222221111
Q ss_pred CeeEeeeeeeeeCCCChHHHHHHHHHHHhCCCCccccC----HHHH-HHhcCCcccCCCCeEEEEecCCeeecHHHHHHH
Q 015072 84 YKVYFKAHQFDMGPSENKSLRSVIASCRKNSVPHQVLD----CRQV-LQKYSGRIEIPENWVGVTTELGGVIKPTKAVSM 158 (413)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~----~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (413)
..+ ....+.. -.....+.++++...|+++.... ..++ ...++. .... ..+.. .-.....+++.
T Consensus 76 g~~--d~~~v~~---~~~~~~~~i~~l~~~Gv~f~~~~~~~~~g~~~~~~~gg-~~~~----r~~~~--~d~~g~~l~~~ 143 (540)
T 1chu_A 76 GIC--DRHAVEF---VASNARSCVQWLIDQGVLFDTHIQPNGEESYHLTREGG-HSHR----RILHA--ADATGREVETT 143 (540)
T ss_dssp TCC--CHHHHHH---HHHHHHHHHHHHHHTTCC---------------------------------------------CC
T ss_pred ccC--CHHHHHH---HHHhHHHHHHHHHHcCCCcccCcccCcCCccccccccc-cccC----eEEEe--CCCCHHHHHHH
Confidence 000 0000000 00011234555666777654332 1111 011111 0000 00110 01123567777
Q ss_pred HHHHHHH-cCCeEecCceEEEEEeeeccCC------Cc--EEEEe-CCcc--EEEeCeEEEcCCcChh
Q 015072 159 FQTLAIK-NGAVLRDNTEVKTVLKVKDDVR------GG--VTVVT-SSGE--EFWGKKCVVTAGAWVG 214 (413)
Q Consensus 159 l~~~~~~-~gv~i~~~~~V~~i~~~~~~~~------~~--~~v~~-~~g~--~i~ad~vV~A~G~~~~ 214 (413)
|.+.+++ .|++|++++.|++|.. ++++ .. +.+.. .+|+ ++.|+.||+|+|.++.
T Consensus 144 L~~~~~~~~gv~i~~~~~v~~L~~--~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~ 209 (540)
T 1chu_A 144 LVSKALNHPNIRVLERTNAVDLIV--SDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGASK 209 (540)
T ss_dssp CHHHHHHCTTEEEECSEEEEEEEE--GGGTTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCCGG
T ss_pred HHHHHHcCCCCEEEeCcEEEEEEE--cCCCCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCccc
Confidence 8888888 6999999999999987 5322 22 33332 3564 6899999999999885
No 65
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=99.40 E-value=4.2e-12 Score=123.82 Aligned_cols=193 Identities=13% Similarity=0.166 Sum_probs=102.9
Q ss_pred CCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCCCCcceecccCCccccchHHHHHHHHHHHHHhcCCe
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESRTIRATYPEDYYHPMVLESSLLWEQAQSEIGYK 85 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (413)
.++||||||||++|+++|+.|+++|.+|+||||....+ +.+....|.+...........+. ..+.+..+....
T Consensus 17 ~~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~~~~--g~s~~a~GGi~a~~~~~~~ds~~----~~~~dtl~~g~~- 89 (621)
T 2h88_A 17 HEFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTR--SHTVAAQGGINAALGNMEDDNWR----WHFYDTVKGSDW- 89 (621)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGG--SGGGGCCSCEECCCCSSSCCCHH----HHHHHHHHHTTT-
T ss_pred ccCCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCC--CCchhhCCCcEecCCCCCCCCHH----HHHHHHHHhcCC-
Confidence 35899999999999999999999999999999987653 23222233332221110000000 011111111000
Q ss_pred eEeeeeeeeeCCCChHHHHHHHHHHHhCCCCccccCHHHHH-HhcCCcccCC-----CCeEEEEecCCeeecHHHHHHHH
Q 015072 86 VYFKAHQFDMGPSENKSLRSVIASCRKNSVPHQVLDCRQVL-QKYSGRIEIP-----ENWVGVTTELGGVIKPTKAVSMF 159 (413)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~-~~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~l 159 (413)
......+.. -.....+.+.++...|+++......++. ..++. ...+ ......+.. + .....+++.|
T Consensus 90 -l~d~~~v~~---l~~~s~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg-~s~~~g~~~~~~R~~~~~-d--~tG~~l~~~L 161 (621)
T 2h88_A 90 -LGDQDAIHY---MTEQAPAAVIELENYGMPFSRTEEGKIYQRAFGG-QSLQFGKGGQAHRCCCVA-D--RTGHSLLHTL 161 (621)
T ss_dssp -CSCHHHHHH---HHHHHHHHHHHHHHTTCCCCBCTTSSBCEECCTT-CBSTTTTSCBCCCEECST-T--CHHHHHHHHH
T ss_pred -CCCHHHHHH---HHHHHHHHHHHHHHcCCCcccCCCCceeccccCc-ccccccCCCcceeEEEec-C--CCHHHHHHHH
Confidence 000000000 0001123445566677765443221111 01111 1100 000111111 0 1346788999
Q ss_pred HHHHHHcCCeEecCceEEEEEeeeccCC-CcEEEEe-CCcc--EEEeCeEEEcCCcChhh
Q 015072 160 QTLAIKNGAVLRDNTEVKTVLKVKDDVR-GGVTVVT-SSGE--EFWGKKCVVTAGAWVGK 215 (413)
Q Consensus 160 ~~~~~~~gv~i~~~~~V~~i~~~~~~~~-~~~~v~~-~~g~--~i~ad~vV~A~G~~~~~ 215 (413)
.+.+.+.|++|++++.|++|.. +++. .++.+.. .+|+ .+.|+.||+|||+++..
T Consensus 162 ~~~~~~~gv~i~~~~~v~~Li~--~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~ 219 (621)
T 2h88_A 162 YGRSLRYDTSYFVEYFALDLLM--ENGECRGVIALCIEDGTIHRFRAKNTVIATGGYGRT 219 (621)
T ss_dssp HHHHTTSCCEEEETEEEEEEEE--ETTEEEEEEEEETTTCCEEEEEEEEEEECCCCCGGG
T ss_pred HHHHHhCCCEEEEceEEEEEEE--ECCEEEEEEEEEcCCCcEEEEEcCeEEECCCccccc
Confidence 9998889999999999999988 6321 1233333 4665 68999999999999863
No 66
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.39 E-value=4.8e-12 Score=115.52 Aligned_cols=160 Identities=16% Similarity=0.105 Sum_probs=87.5
Q ss_pred ccEEEECCCHHHHHHHHHHHH---cCCcEEEEcccCCCCCCCCCCCCCcceecccCCccccchHHHHHHHHHHHHHhcCC
Q 015072 8 FDVIVVGAGIMGSSAAYQLAK---RGQKTLLLEQFDFLHHRGSSHGESRTIRATYPEDYYHPMVLESSLLWEQAQSEIGY 84 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~---~g~~V~lvE~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (413)
+||+|||||++|+++|+.|++ +|++|+|+||.+..+++.++...... . +.
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~~~~~~~~~-----~----------------------~~ 54 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRMTTACSPHN-----P----------------------QC 54 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGGCEEECSSC-----T----------------------TC
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCccceeeeecCCC-----C----------------------Cc
Confidence 589999999999999999999 89999999998776554333211000 0 00
Q ss_pred eeEeeeeeeeeCCCChHHHHHHHHHHHhCCCCccccCHHHHHHhcCCcccCCCCeEEEEecCCeeecHHHHHHHHHHHHH
Q 015072 85 KVYFKAHQFDMGPSENKSLRSVIASCRKNSVPHQVLDCRQVLQKYSGRIEIPENWVGVTTELGGVIKPTKAVSMFQTLAI 164 (413)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 164 (413)
.+......+.........+....+.+...+....+... ... ...... ...+....+. ..+.+.+.+.
T Consensus 55 ~~d~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~------~~~-~~~~~~-~~~~~~~~g~---~~l~~~l~~~-- 121 (342)
T 3qj4_A 55 TADLGAQYITCTPHYAKKHQRFYDELLAYGVLRPLSSP------IEG-MVMKEG-DCNFVAPQGI---SSIIKHYLKE-- 121 (342)
T ss_dssp EEESSCCCEEECSSHHHHTHHHHHHHHHTTSCEECCSC------EET-CCC--C-CEEEECTTCT---THHHHHHHHH--
T ss_pred eEecCCceEEcCchHHHHHHHHHHHHHhCCCeecCchh------hcc-eeccCC-ccceecCCCH---HHHHHHHHHh--
Confidence 00000000111111111222223333222221111000 000 000000 1122222222 3455544443
Q ss_pred HcCCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcC
Q 015072 165 KNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAW 212 (413)
Q Consensus 165 ~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~ 212 (413)
.|++|+++++|++|.. + ++++.|++.+|+++.+|.||+|+.+.
T Consensus 122 -~g~~i~~~~~V~~i~~--~--~~~~~v~~~~g~~~~ad~vV~A~p~~ 164 (342)
T 3qj4_A 122 -SGAEVYFRHRVTQINL--R--DDKWEVSKQTGSPEQFDLIVLTMPVP 164 (342)
T ss_dssp -HTCEEESSCCEEEEEE--C--SSSEEEEESSSCCEEESEEEECSCHH
T ss_pred -cCCEEEeCCEEEEEEE--c--CCEEEEEECCCCEEEcCEEEECCCHH
Confidence 3899999999999998 7 46788988888778999999999853
No 67
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=99.38 E-value=4.9e-12 Score=119.79 Aligned_cols=61 Identities=16% Similarity=0.054 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHHHcCCeEecCceEEEEEeeecc-CCCcEEEEeCCccEEEeCeEEEcCCcChhhh
Q 015072 153 TKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDD-VRGGVTVVTSSGEEFWGKKCVVTAGAWVGKL 216 (413)
Q Consensus 153 ~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~-~~~~~~v~~~~g~~i~ad~vV~A~G~~~~~l 216 (413)
..+.+.|.+.+++.|++|+++++|++|.. +. ++..+.|++ +|+++.||.||+|+|.|+..+
T Consensus 242 ~~l~~al~~~~~~~G~~i~~~~~V~~i~~--~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~~~~l 303 (453)
T 2bcg_G 242 GELPQGFARLSAIYGGTYMLDTPIDEVLY--KKDTGKFEGVKT-KLGTFKAPLVIADPTYFPEKC 303 (453)
T ss_dssp THHHHHHHHHHHHTTCEEECSCCCCEEEE--ETTTTEEEEEEE-TTEEEECSCEEECGGGCGGGE
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEE--ECCCCeEEEEEE-CCeEEECCEEEECCCccchhh
Confidence 57889999999999999999999999988 61 223345666 466799999999999997644
No 68
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.36 E-value=1.1e-11 Score=109.88 Aligned_cols=38 Identities=39% Similarity=0.502 Sum_probs=34.7
Q ss_pred CCccEEEECCCHHHHHHHHHHHHc-CCcEEEEcccCCCC
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAKR-GQKTLLLEQFDFLH 43 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~~-g~~V~lvE~~~~~~ 43 (413)
.++||+|||||++|+++|+.|+++ |.+|+|||+.+..+
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~g 76 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPG 76 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCC
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCC
Confidence 358999999999999999999997 99999999987664
No 69
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=99.34 E-value=4e-11 Score=112.44 Aligned_cols=58 Identities=19% Similarity=0.166 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcC
Q 015072 153 TKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAW 212 (413)
Q Consensus 153 ~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~ 212 (413)
..+.+.|.+.+++.|++|+++++|++|.. ++++..+.|++.+|++++||+||+|++.+
T Consensus 256 ~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~--d~~g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 256 GGIPEGFSRMCAINGGTFMLNKNVVDFVF--DDDNKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp THHHHHHHHHHHHC--CEESSCCEEEEEE--CTTSCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCeEEEEEE--ecCCeEEEEEECCCcEEECCEEEECCCcc
Confidence 68899999999999999999999999987 53345677888888889999999999987
No 70
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.33 E-value=1.2e-11 Score=120.70 Aligned_cols=188 Identities=13% Similarity=0.079 Sum_probs=99.5
Q ss_pred CCccEEEECCCHHHHHHHHHHHHcC--CcEEEEcccCCCCCCCCCCCCCcceecccCCccccchHHHHHHHHHHHHHhcC
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAKRG--QKTLLLEQFDFLHHRGSSHGESRTIRATYPEDYYHPMVLESSLLWEQAQSEIG 83 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~~g--~~V~lvE~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (413)
.++||+|||||++|+++|+.|+++| .+|+||||....++ .+....+.+........... ..+.+......
T Consensus 4 ~~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~~~--~s~~a~GGi~~~~~~~ds~~------~~~~d~~~~g~ 75 (602)
T 1kf6_A 4 FQADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRS--HTVAAEGGSAAVAQDHDSFE------YHFHDTVAGGD 75 (602)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGGGS--GGGGCCSCEECCCSTTCCHH------HHHHHHHHHTT
T ss_pred ccCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCCCC--hHHHhcCccEEeCCCCCCHH------HHHHHHHHhcC
Confidence 3589999999999999999999999 99999999865532 22222222222111111110 01111111100
Q ss_pred CeeEeeeeeeeeCCCChHHHHHHHHHHHhCCCCccccCHHHHH-HhcCCcccCCCCeEEEEecCCeeecHHHHHHHHHHH
Q 015072 84 YKVYFKAHQFDMGPSENKSLRSVIASCRKNSVPHQVLDCRQVL-QKYSGRIEIPENWVGVTTELGGVIKPTKAVSMFQTL 162 (413)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 162 (413)
.. .....+.. -.......++++...|+++.......+. ..++. .. .....+. .+ .....+++.|.+.
T Consensus 76 ~~--~d~~~v~~---~~~~~~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg-~~---~~r~~~~-~d--~tg~~l~~~L~~~ 143 (602)
T 1kf6_A 76 WL--CEQDVVDY---FVHHCPTEMTQLELWGCPWSRRPDGSVNVRRFGG-MK---IERTWFA-AD--KTGFHMLHTLFQT 143 (602)
T ss_dssp TC--SCHHHHHH---HHHHHHHHHHHHHHTTCCCCBCTTSSBCCBCCTT-CS---SCCEECS-TT--CHHHHHHHHHHHH
T ss_pred CC--CCHHHHHH---HHHHHHHHHHHHHHcCCCcccCCCCcccccccCC-cc---CCeEEEc-CC--CCHHHHHHHHHHH
Confidence 00 00000000 0001123344555667654332211100 00111 00 0011111 11 1246788888888
Q ss_pred HHHcC-CeEecCceEEEEEeeeccCC-CcEEEE-eCCcc--EEEeCeEEEcCCcChhh
Q 015072 163 AIKNG-AVLRDNTEVKTVLKVKDDVR-GGVTVV-TSSGE--EFWGKKCVVTAGAWVGK 215 (413)
Q Consensus 163 ~~~~g-v~i~~~~~V~~i~~~~~~~~-~~~~v~-~~~g~--~i~ad~vV~A~G~~~~~ 215 (413)
+.+.| +++++++.|++|.. +++. .++.+. +.+|+ .+.|+.||+|+|.++..
T Consensus 144 ~~~~gnv~i~~~~~v~~l~~--~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s~~ 199 (602)
T 1kf6_A 144 SLQFPQIQRFDEHFVLDILV--DDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRV 199 (602)
T ss_dssp HTTCTTEEEEETEEEEEEEE--ETTEEEEEEEEETTTTEEEEEECSCEEECCCCCGGG
T ss_pred HHhCCCcEEEeCCEEEEEEE--eCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCCccc
Confidence 88888 99999999999998 6321 123333 35676 69999999999999864
No 71
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=99.32 E-value=1.2e-11 Score=121.37 Aligned_cols=187 Identities=12% Similarity=0.120 Sum_probs=100.2
Q ss_pred CCccEEEECCCHHHHHHHHHHHHc------CCcEEEEcccCCCCCCCCCCCCCc--ceecccCCccccchHHHHHHHHHH
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAKR------GQKTLLLEQFDFLHHRGSSHGESR--TIRATYPEDYYHPMVLESSLLWEQ 77 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~~------g~~V~lvE~~~~~~~~~~s~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 77 (413)
.++||||||||++|+++|+.|+++ |.+|+||||....+ +++.. .| .+........ ....+..
T Consensus 21 ~~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~~~--s~s~A-qG~~gi~a~l~~ds-------~e~~~~~ 90 (662)
T 3gyx_A 21 HSVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASLER--SGAVA-QGLSAINTYLGDNN-------ADDYVRM 90 (662)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCTTT--CSTTT-TCEEEECCCCTTSC-------HHHHHHH
T ss_pred EEcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCCCC--Ccccc-cCcchheeecCCCC-------HHHHHHH
Confidence 358999999999999999999998 99999999987653 22322 33 2222211100 0112222
Q ss_pred HHHhc-CCeeEeeeeeeeeCCCChHHHHHHHHHHHhCCCCcccc-CH-----HHHHHhcCCcccCCCCeEEEEecC---C
Q 015072 78 AQSEI-GYKVYFKAHQFDMGPSENKSLRSVIASCRKNSVPHQVL-DC-----RQVLQKYSGRIEIPENWVGVTTEL---G 147 (413)
Q Consensus 78 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l-~~-----~~~~~~~p~~~~~~~~~~~~~~~~---~ 147 (413)
..... +.. ....+.. -.....+.+.++...|+++... .. ......++. +.... +..... .
T Consensus 91 ~~~~~~gl~---d~~~v~~---l~~~a~~~i~~L~~~Gv~f~~~~~~G~~~~g~~~~~fg~-~~~~g---g~~~~r~~~~ 160 (662)
T 3gyx_A 91 VRTDLMGLV---REDLIYD---LGRHVDDSVHLFEEWGLPVWIKDEHGHNLDGAQAKAAGK-SLRNG---DKPVRSGRWQ 160 (662)
T ss_dssp HHHHTTTCC---CHHHHHH---HHHHHHHHHHHHHHHTCCBCEECSSSCEECHHHHHHHTC-CTTTT---CCBCCSSTTC
T ss_pred HHHhcCCCc---cHHHHHH---HHHHHHHHHHHHHHcCCCceecCCCCccccchhhhcccc-ccccC---ccccccceec
Confidence 21111 100 0000000 0001123344555667665433 10 111122222 11000 000000 1
Q ss_pred eeecHHHHHHHHHHHHHHc--CCeEecCceEEEEEeeeccC--CCcEEE--E-eCCcc--EEEeCeEEEcCCcChh
Q 015072 148 GVIKPTKAVSMFQTLAIKN--GAVLRDNTEVKTVLKVKDDV--RGGVTV--V-TSSGE--EFWGKKCVVTAGAWVG 214 (413)
Q Consensus 148 ~~~~~~~~~~~l~~~~~~~--gv~i~~~~~V~~i~~~~~~~--~~~~~v--~-~~~g~--~i~ad~vV~A~G~~~~ 214 (413)
..+....+.+.|.+.+++. |++++.++.|++|.. +++ +..+.| . ..+|+ .+.|+.||+|||+++.
T Consensus 161 ~~~~G~~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~--~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG~g~ 234 (662)
T 3gyx_A 161 IMINGESYKVIVAEAAKNALGQDRIIERIFIVKLLL--DKNTPNRIAGAVGFNLRANEVHIFKANAMVVACGGAVN 234 (662)
T ss_dssp EEEEETSHHHHHHHHHHHHHCTTTEECSEEECCCEE--CSSSTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCS
T ss_pred ccCCHHHHHHHHHHHHHhcCCCcEEEEceEEEEEEE--eCCccceEEEEEEEEcCCCcEEEEEeCEEEECCCcccc
Confidence 2234467788888888887 999999999999988 643 122333 2 24554 6899999999999875
No 72
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.32 E-value=1.1e-11 Score=116.89 Aligned_cols=41 Identities=46% Similarity=0.604 Sum_probs=37.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCC
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSS 48 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~~~~~~s 48 (413)
+||+|||||++|+++|+.|+++|++|+|||+.+..||++.+
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~t 42 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGGRAYS 42 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCE
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccCeecc
Confidence 79999999999999999999999999999998877766554
No 73
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.32 E-value=9.3e-12 Score=119.96 Aligned_cols=147 Identities=22% Similarity=0.214 Sum_probs=95.3
Q ss_pred CCccEEEECCCHHHHHHHHHHH-HcCCcEEEEcccCCCCCCCCCCCCCcceecccCCccccchHHHHHHHHHHHHHhcCC
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLA-KRGQKTLLLEQFDFLHHRGSSHGESRTIRATYPEDYYHPMVLESSLLWEQAQSEIGY 84 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~-~~g~~V~lvE~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (413)
.++||+|||||++|+++|..|+ +.|++|+|||+.+..|+..... .+ .+.
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~--------~y----------------------pg~ 56 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWN--------RY----------------------PGA 56 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHC--------CC----------------------TTC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCccccc--------CC----------------------CCc
Confidence 4589999999999999999999 8899999999987654311000 00 011
Q ss_pred eeEeeeeeeeeCCCChHHHHHHHHHHHhCCCCccccCHHHHHHhcCCcccCCCCeEEEEecCCeeecHHHHHHHHHHHHH
Q 015072 85 KVYFKAHQFDMGPSENKSLRSVIASCRKNSVPHQVLDCRQVLQKYSGRIEIPENWVGVTTELGGVIKPTKAVSMFQTLAI 164 (413)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 164 (413)
.+..+...+.... . .+....++. . ....+...+.+.+.+.+.
T Consensus 57 ~~d~~s~~~~~~~-----------------------~-~~~~~~~~~----~----------~~~~~~~ei~~~l~~~~~ 98 (540)
T 3gwf_A 57 LSDTESHLYRFSF-----------------------D-RDLLQESTW----K----------TTYITQPEILEYLEDVVD 98 (540)
T ss_dssp EEEEEGGGSSCCS-----------------------C-HHHHHHCCC----S----------BSEEEHHHHHHHHHHHHH
T ss_pred eecCCcceeeecc-----------------------c-cccccCCCC----c----------ccCCCHHHHHHHHHHHHH
Confidence 1111110000000 0 001011110 0 122344677788888888
Q ss_pred HcCC--eEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcChhhhhhhhcC
Q 015072 165 KNGA--VLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWVGKLVKKISG 222 (413)
Q Consensus 165 ~~gv--~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~~~l~~~~~g 222 (413)
+.|+ .++++++|+++.. +++...+.|++++|+++.+|+||+|+|.++.+..+.+.|
T Consensus 99 ~~g~~~~i~~~~~V~~i~~--~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s~p~~p~ipG 156 (540)
T 3gwf_A 99 RFDLRRHFKFGTEVTSALY--LDDENLWEVTTDHGEVYRAKYVVNAVGLLSAINFPNLPG 156 (540)
T ss_dssp HTTCGGGEEESCCEEEEEE--ETTTTEEEEEETTSCEEEEEEEEECCCSCCSBCCCCCTT
T ss_pred HcCCcceeEeccEEEEEEE--eCCCCEEEEEEcCCCEEEeCEEEECCcccccCCCCCCCC
Confidence 8888 8999999999998 643457899999998899999999999887655444433
No 74
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=99.31 E-value=1.4e-11 Score=117.86 Aligned_cols=58 Identities=12% Similarity=0.212 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcChh
Q 015072 153 TKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWVG 214 (413)
Q Consensus 153 ~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~~ 214 (413)
..+.+.+.+.+++.|++++++++|+++.. + ++.+.+.+.+|+++.+|.||+|+|...+
T Consensus 232 ~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~--~--~~~v~v~~~~g~~i~aD~Vi~A~G~~p~ 289 (484)
T 3o0h_A 232 YDLRQLLNDAMVAKGISIIYEATVSQVQS--T--ENCYNVVLTNGQTICADRVMLATGRVPN 289 (484)
T ss_dssp HHHHHHHHHHHHHHTCEEESSCCEEEEEE--C--SSSEEEEETTSCEEEESEEEECCCEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEe--e--CCEEEEEECCCcEEEcCEEEEeeCCCcC
Confidence 56777888888889999999999999988 6 4557888888888999999999998654
No 75
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.31 E-value=2.1e-11 Score=110.90 Aligned_cols=120 Identities=22% Similarity=0.280 Sum_probs=84.7
Q ss_pred CCCCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCCCCcceecccCCccccchHHHHHHHHHHHHHhcC
Q 015072 4 SGENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESRTIRATYPEDYYHPMVLESSLLWEQAQSEIG 83 (413)
Q Consensus 4 ~~~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (413)
|++++||+|||||++|+++|+.|+++|++|+|||+.+..++.. ...++.
T Consensus 2 ~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~---------~~~~~~---------------------- 50 (335)
T 2zbw_A 2 AADHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQL---------TALYPE---------------------- 50 (335)
T ss_dssp -CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHH---------HHTCTT----------------------
T ss_pred CCCcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCee---------eccCCC----------------------
Confidence 3456899999999999999999999999999999976543100 000000
Q ss_pred CeeEeeeeeeeeCCCChHHHHHHHHHHHhCCCCccccCHHHHHHhcCCcccCCCCeEEEEecCCeeecHHHHHHHHHHHH
Q 015072 84 YKVYFKAHQFDMGPSENKSLRSVIASCRKNSVPHQVLDCRQVLQKYSGRIEIPENWVGVTTELGGVIKPTKAVSMFQTLA 163 (413)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 163 (413)
.. + . . .+. + ..+.+..+...+.+.+
T Consensus 51 ~~-------~-~-------------------------~-------~~~-~--------------~~~~~~~~~~~l~~~~ 75 (335)
T 2zbw_A 51 KY-------I-Y-------------------------D-------VAG-F--------------PKVYAKDLVKGLVEQV 75 (335)
T ss_dssp SE-------E-C-------------------------C-------STT-C--------------SSEEHHHHHHHHHHHH
T ss_pred ce-------e-e-------------------------c-------cCC-C--------------CCCCHHHHHHHHHHHH
Confidence 00 0 0 0 000 0 0123456777777777
Q ss_pred HHcCCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcCh
Q 015072 164 IKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWV 213 (413)
Q Consensus 164 ~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~ 213 (413)
.+.+++++++++|+++.. + ++.+.+.+.+|+++.+|+||+|+|..+
T Consensus 76 ~~~~~~~~~~~~v~~i~~--~--~~~~~v~~~~g~~~~~~~lv~AtG~~~ 121 (335)
T 2zbw_A 76 APFNPVYSLGERAETLER--E--GDLFKVTTSQGNAYTAKAVIIAAGVGA 121 (335)
T ss_dssp GGGCCEEEESCCEEEEEE--E--TTEEEEEETTSCEEEEEEEEECCTTSE
T ss_pred HHcCCEEEeCCEEEEEEE--C--CCEEEEEECCCCEEEeCEEEECCCCCC
Confidence 778999999999999988 6 346788888887799999999999854
No 76
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.30 E-value=4.2e-11 Score=113.76 Aligned_cols=175 Identities=15% Similarity=0.086 Sum_probs=94.6
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCCCCcceecccCCccccchHHHHHHHHHHHHHhcCCeeEe
Q 015072 9 DVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESRTIRATYPEDYYHPMVLESSLLWEQAQSEIGYKVYF 88 (413)
Q Consensus 9 dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (413)
||+|||||++|+++|+.|+++|++|+||||. ..+ +++....|.+.......... . ..+.+..+....- .
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~-~~~--g~s~~a~Ggi~~~~~~~d~~--~----~~~~d~l~~g~~~--~ 69 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR-IDG--GSTPIAKGGVAASVGSDDSP--E----LHAQDTIRVGDGL--C 69 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS-TTC--SSGGGCCSCEECCCSTTCCH--H----HHHHHHHHHHTTC--S
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCC--chHHHHhCCeEEeCCCCCCH--H----HHHHHHHHhcCCc--C
Confidence 7999999999999999999999999999998 332 33333333333222211110 0 0111111110000 0
Q ss_pred eeeeeeeCCCChHHHHHHHHHHHhCCCCccccCHHHHHHhcCCcccCCCCeEEEEecCCeeecHHHHHHHHHHHHHHcCC
Q 015072 89 KAHQFDMGPSENKSLRSVIASCRKNSVPHQVLDCRQVLQKYSGRIEIPENWVGVTTELGGVIKPTKAVSMFQTLAIKNGA 168 (413)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv 168 (413)
....+.. -.+...+..+++...|+++... ...++. ...+ ...+. +...+..+.+.|.+.+++.|+
T Consensus 70 d~~~v~~---~~~~~~~~i~~l~~~Gv~~~~~-----~~~~~g-~~~~---r~~~~---~d~~g~~l~~~L~~~~~~~gv 134 (472)
T 2e5v_A 70 DVKTVNY---VTSEAKNVIETFESWGFEFEED-----LRLEGG-HTKR---RVLHR---TDETGREIFNFLLKLAREEGI 134 (472)
T ss_dssp CHHHHHH---HHHHHHHHHHHHHHTTCCCCSS-----CBCCTT-CSSC---CEECS---SSCHHHHHHHHHHHHHHHTTC
T ss_pred CHHHHHH---HHHHHHHHHHHHHHcCCCCCcc-----cccccC-cCcC---cEEEe---CCCCHHHHHHHHHHHHHhCCC
Confidence 0000000 0001123345555666654321 011111 1111 11111 123456788888888888899
Q ss_pred eEecCceEEEEEeeeccCCCc--EEEEeCCccEEEeCeEEEcCCcChh
Q 015072 169 VLRDNTEVKTVLKVKDDVRGG--VTVVTSSGEEFWGKKCVVTAGAWVG 214 (413)
Q Consensus 169 ~i~~~~~V~~i~~~~~~~~~~--~~v~~~~g~~i~ad~vV~A~G~~~~ 214 (413)
+++++++| ++.. +++ .. +.+.+.+|+ +.+|.||+|||.++.
T Consensus 135 ~i~~~~~v-~l~~--~~~-~v~Gv~v~~~~g~-~~a~~VVlAtGg~~~ 177 (472)
T 2e5v_A 135 PIIEDRLV-EIRV--KDG-KVTGFVTEKRGLV-EDVDKLVLATGGYSY 177 (472)
T ss_dssp CEECCCEE-EEEE--ETT-EEEEEEETTTEEE-CCCSEEEECCCCCGG
T ss_pred EEEECcEE-EEEE--eCC-EEEEEEEEeCCCe-EEeeeEEECCCCCcc
Confidence 99999999 9987 521 22 233334454 789999999999885
No 77
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.30 E-value=1.8e-11 Score=118.18 Aligned_cols=68 Identities=21% Similarity=0.192 Sum_probs=54.4
Q ss_pred cHHHHHHHHHHHHHHcCC--eEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcChhhhhhhh
Q 015072 151 KPTKAVSMFQTLAIKNGA--VLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWVGKLVKKI 220 (413)
Q Consensus 151 ~~~~~~~~l~~~~~~~gv--~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~~~l~~~~ 220 (413)
+...+...+.+.+.+.++ .++++++|+++.. ++....+.|++.+|+++.||+||+|+|.++.+..+.+
T Consensus 97 ~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~--~~~~~~w~V~~~~G~~i~ad~lV~AtG~~s~p~~p~i 166 (549)
T 4ap3_A 97 TQPEILAYLEHVADRFDLRRDIRFDTRVTSAVL--DEEGLRWTVRTDRGDEVSARFLVVAAGPLSNANTPAF 166 (549)
T ss_dssp BHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEE--ETTTTEEEEEETTCCEEEEEEEEECCCSEEECCCCCC
T ss_pred CHHHHHHHHHHHHHHcCCCccEEECCEEEEEEE--cCCCCEEEEEECCCCEEEeCEEEECcCCCCCCCCCCC
Confidence 346677778888888887 8899999999998 6434578999999988999999999998765444443
No 78
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.30 E-value=3.8e-11 Score=110.39 Aligned_cols=120 Identities=21% Similarity=0.259 Sum_probs=85.0
Q ss_pred CCCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCCCCcceecccCCccccchHHHHHHHHHHHHHhcCC
Q 015072 5 GENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESRTIRATYPEDYYHPMVLESSLLWEQAQSEIGY 84 (413)
Q Consensus 5 ~~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (413)
++++||+|||||++|+++|+.|+++|++|+|||+.+..++... ..++. .
T Consensus 12 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~---------~~~~~----------------------~ 60 (360)
T 3ab1_A 12 HDMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLA---------ALYPE----------------------K 60 (360)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHH---------HTCTT----------------------S
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccc---------ccCCC----------------------c
Confidence 4468999999999999999999999999999999765431000 00000 0
Q ss_pred eeEeeeeeeeeCCCChHHHHHHHHHHHhCCCCccccCHHHHHHhcCCcccCCCCeEEEEecCCeeecHHHHHHHHHHHHH
Q 015072 85 KVYFKAHQFDMGPSENKSLRSVIASCRKNSVPHQVLDCRQVLQKYSGRIEIPENWVGVTTELGGVIKPTKAVSMFQTLAI 164 (413)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 164 (413)
. + + . .+. + ..+++..+.+.+.+.+.
T Consensus 61 ~-------~-~------------------~--------------~~~-~--------------~~~~~~~~~~~l~~~~~ 85 (360)
T 3ab1_A 61 H-------I-Y------------------D--------------VAG-F--------------PEVPAIDLVESLWAQAE 85 (360)
T ss_dssp E-------E-C------------------C--------------STT-C--------------SSEEHHHHHHHHHHHHH
T ss_pred c-------c-c------------------c--------------CCC-C--------------CCCCHHHHHHHHHHHHH
Confidence 0 0 0 0 000 0 01234667777878888
Q ss_pred HcCCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcCh
Q 015072 165 KNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWV 213 (413)
Q Consensus 165 ~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~ 213 (413)
+.+++++++++|+++.. .+ +..+.|.+.+|+++.+|+||+|+|..+
T Consensus 86 ~~~~~~~~~~~v~~i~~--~~-~~~~~v~~~~g~~~~~~~li~AtG~~~ 131 (360)
T 3ab1_A 86 RYNPDVVLNETVTKYTK--LD-DGTFETRTNTGNVYRSRAVLIAAGLGA 131 (360)
T ss_dssp TTCCEEECSCCEEEEEE--CT-TSCEEEEETTSCEEEEEEEEECCTTCS
T ss_pred HhCCEEEcCCEEEEEEE--CC-CceEEEEECCCcEEEeeEEEEccCCCc
Confidence 88999999999999998 62 236788888887899999999999854
No 79
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.30 E-value=3e-11 Score=112.63 Aligned_cols=59 Identities=5% Similarity=-0.019 Sum_probs=47.5
Q ss_pred ecHHHHHHHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcChh
Q 015072 150 IKPTKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWVG 214 (413)
Q Consensus 150 ~~~~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~~ 214 (413)
++...+.+.|.+.+. +++++++++|+++.. + ++.+.|++.+|+++++|.||.|+|.++.
T Consensus 125 i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~--~--~~~v~v~~~~g~~~~ad~vV~AdG~~S~ 183 (398)
T 2xdo_A 125 INRNDLRAILLNSLE--NDTVIWDRKLVMLEP--G--KKKWTLTFENKPSETADLVILANGGMSK 183 (398)
T ss_dssp ECHHHHHHHHHHTSC--TTSEEESCCEEEEEE--C--SSSEEEEETTSCCEEESEEEECSCTTCS
T ss_pred ECHHHHHHHHHhhcC--CCEEEECCEEEEEEE--C--CCEEEEEECCCcEEecCEEEECCCcchh
Confidence 455677777766553 368889999999998 6 4568888888888999999999999874
No 80
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.29 E-value=7.9e-12 Score=120.59 Aligned_cols=70 Identities=14% Similarity=0.038 Sum_probs=53.2
Q ss_pred cHHHHHHHHHHHHHHcCC--eEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcChhhhhhhhcC
Q 015072 151 KPTKAVSMFQTLAIKNGA--VLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWVGKLVKKISG 222 (413)
Q Consensus 151 ~~~~~~~~l~~~~~~~gv--~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~~~l~~~~~g 222 (413)
....+...+.+.+.+.++ .++++++|+++.. ++....|.|++++|+++.||+||+|+|.++.+..+.+.|
T Consensus 85 ~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~--~~~~~~w~V~~~~G~~~~ad~lV~AtG~~s~p~~p~ipG 156 (545)
T 3uox_A 85 SQPEMLRYVNRAADAMDVRKHYRFNTRVTAARY--VENDRLWEVTLDNEEVVTCRFLISATGPLSASRMPDIKG 156 (545)
T ss_dssp BHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEE--EGGGTEEEEEETTTEEEEEEEEEECCCSCBC---CCCTT
T ss_pred CHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEE--eCCCCEEEEEECCCCEEEeCEEEECcCCCCCCcCCCCCC
Confidence 346677777777777777 7889999999988 643467899999998899999999999877655444433
No 81
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=99.29 E-value=4.3e-11 Score=115.57 Aligned_cols=45 Identities=36% Similarity=0.449 Sum_probs=40.5
Q ss_pred CCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCC
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHG 50 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~~~~~~s~~ 50 (413)
+++||+|||||++|+++|+.|+++|++|+|+|+.+..||+..+..
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~t~~ 47 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLR 47 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEEC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCceeecc
Confidence 468999999999999999999999999999999998888766543
No 82
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.28 E-value=2.8e-11 Score=108.46 Aligned_cols=39 Identities=23% Similarity=0.312 Sum_probs=33.5
Q ss_pred CCCCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCC
Q 015072 4 SGENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFL 42 (413)
Q Consensus 4 ~~~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~ 42 (413)
++++|||+|||||++|+++|++|+++|++|+|||++..+
T Consensus 3 ~M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~g 41 (304)
T 4fk1_A 3 AMKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNTNR 41 (304)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCG
T ss_pred CCCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 345799999999999999999999999999999997543
No 83
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=99.28 E-value=4.3e-11 Score=115.37 Aligned_cols=66 Identities=17% Similarity=0.190 Sum_probs=53.3
Q ss_pred HHHHHHHHHHHHHHcCCeEecCceEEEEEeeeccCCCc---EEEEeCCcc-EEEeCeEEEcCCcChhh--hhhhh
Q 015072 152 PTKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGG---VTVVTSSGE-EFWGKKCVVTAGAWVGK--LVKKI 220 (413)
Q Consensus 152 ~~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~---~~v~~~~g~-~i~ad~vV~A~G~~~~~--l~~~~ 220 (413)
+..+.+.+.+.+++.|++++++++|+++.. +++ +. +.|++++|+ ++.+|.||+|+|.+.+. ++..+
T Consensus 254 ~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~--~~~-~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~~~~~l~~~ 325 (523)
T 1mo9_A 254 DNETRAYVLDRMKEQGMEIISGSNVTRIEE--DAN-GRVQAVVAMTPNGEMRIETDFVFLGLGEQPRSAELAKIL 325 (523)
T ss_dssp SHHHHHHHHHHHHHTTCEEESSCEEEEEEE--CTT-SBEEEEEEEETTEEEEEECSCEEECCCCEECCHHHHHHH
T ss_pred cHHHHHHHHHHHHhCCcEEEECCEEEEEEE--cCC-CceEEEEEEECCCcEEEEcCEEEECcCCccCCccCHHHc
Confidence 457788888899999999999999999987 632 22 678888887 79999999999988764 45554
No 84
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.27 E-value=5.9e-11 Score=101.77 Aligned_cols=61 Identities=20% Similarity=0.140 Sum_probs=48.2
Q ss_pred cHHHHHHHHHHHHHHc-CCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcChhh
Q 015072 151 KPTKAVSMFQTLAIKN-GAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWVGK 215 (413)
Q Consensus 151 ~~~~~~~~l~~~~~~~-gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~~~ 215 (413)
++..+.+.+.+.+++. |++++ +++|+++.. ++ +..+.+.+.+|++++||.||+|+|.++..
T Consensus 66 ~~~~~~~~l~~~~~~~~gv~i~-~~~v~~i~~--~~-~~v~~v~~~~g~~i~a~~VV~A~G~~s~~ 127 (232)
T 2cul_A 66 RVWAFHARAKYLLEGLRPLHLF-QATATGLLL--EG-NRVVGVRTWEGPPARGEKVVLAVGSFLGA 127 (232)
T ss_dssp CHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEE--ET-TEEEEEEETTSCCEECSEEEECCTTCSSC
T ss_pred CHHHHHHHHHHHHHcCCCcEEE-EeEEEEEEE--eC-CEEEEEEECCCCEEECCEEEECCCCChhh
Confidence 4467778888888886 99998 579999988 62 23346778888779999999999998763
No 85
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.27 E-value=1e-11 Score=120.25 Aligned_cols=66 Identities=15% Similarity=0.147 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHHHcC--CeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcChhhhhhhh
Q 015072 153 TKAVSMFQTLAIKNG--AVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWVGKLVKKI 220 (413)
Q Consensus 153 ~~~~~~l~~~~~~~g--v~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~~~l~~~~ 220 (413)
..+.+.+...+.+.+ ..++++++|+++.. +++.+.+.|++++|++++||+||+|+|.++.+..+.+
T Consensus 94 ~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~--~~~~~~w~V~~~~G~~~~ad~vV~AtG~~s~p~~p~i 161 (542)
T 1w4x_A 94 PEILRYINFVADKFDLRSGITFHTTVTAAAF--DEATNTWTVDTNHGDRIRARYLIMASGQLSVPQLPNF 161 (542)
T ss_dssp HHHHHHHHHHHHHTTGGGGEECSCCEEEEEE--ETTTTEEEEEETTCCEEEEEEEEECCCSCCCCCCCCC
T ss_pred HHHHHHHHHHHHHcCCCceEEcCcEEEEEEE--cCCCCeEEEEECCCCEEEeCEEEECcCCCCCCCCCCC
Confidence 455666666666655 67889999999998 6433578898888888999999999999876554444
No 86
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.27 E-value=5.8e-11 Score=112.36 Aligned_cols=66 Identities=14% Similarity=0.081 Sum_probs=49.6
Q ss_pred cHHHHHHHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeCC---cc---EEEeCeEEEcCCcChhhhhhhh
Q 015072 151 KPTKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSS---GE---EFWGKKCVVTAGAWVGKLVKKI 220 (413)
Q Consensus 151 ~~~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~---g~---~i~ad~vV~A~G~~~~~l~~~~ 220 (413)
....+.+.+.+.+.+.+..++++++|++|.. . ++.+.|++.+ |+ ++.+|+||+|+|.++.+..+.+
T Consensus 113 ~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~--~--~~~~~V~~~~~~~G~~~~~~~~d~VVvAtG~~s~p~~p~i 184 (447)
T 2gv8_A 113 HRHTIQEYQRIYAQPLLPFIKLATDVLDIEK--K--DGSWVVTYKGTKAGSPISKDIFDAVSICNGHYEVPYIPNI 184 (447)
T ss_dssp BHHHHHHHHHHHHGGGGGGEECSEEEEEEEE--E--TTEEEEEEEESSTTCCEEEEEESEEEECCCSSSSBCBCCC
T ss_pred CHHHHHHHHHHHHHHhhCeEEeCCEEEEEEe--C--CCeEEEEEeecCCCCeeEEEEeCEEEECCCCCCCCCCCCC
Confidence 3456777777777776788989999999988 6 4557776654 65 6999999999999876544433
No 87
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=99.27 E-value=4e-11 Score=114.62 Aligned_cols=48 Identities=33% Similarity=0.439 Sum_probs=41.2
Q ss_pred CCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCCCCc
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESR 53 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~~~~~~s~~~~~ 53 (413)
.++||+|||||++|+++|+.|+++|++|+|+|+.+..||+..+....+
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~~t~~~~g 62 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVGTHALAG 62 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTCCEEEETT
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeeeeccCC
Confidence 468999999999999999999999999999999999888877654433
No 88
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=99.27 E-value=6.5e-11 Score=113.69 Aligned_cols=57 Identities=25% Similarity=0.257 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHHcC-CeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcCh
Q 015072 153 TKAVSMFQTLAIKNG-AVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWV 213 (413)
Q Consensus 153 ~~~~~~l~~~~~~~g-v~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~ 213 (413)
..+.+.|.+.+.+.| ++|+++++|++|.. . ++.+.|++.+|++++||+||+|+|...
T Consensus 255 ~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~--~--~~~v~v~~~~g~~~~ad~vI~a~~~~~ 312 (495)
T 2vvm_A 255 SAFARRFWEEAAGTGRLGYVFGCPVRSVVN--E--RDAARVTARDGREFVAKRVVCTIPLNV 312 (495)
T ss_dssp HHHHHHHHHHHHTTTCEEEESSCCEEEEEE--C--SSSEEEEETTCCEEEEEEEEECCCGGG
T ss_pred HHHHHHHHHHhhhcCceEEEeCCEEEEEEE--c--CCEEEEEECCCCEEEcCEEEECCCHHH
Confidence 567888888888888 99999999999998 6 456888888887799999999999754
No 89
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.26 E-value=1.1e-10 Score=95.91 Aligned_cols=62 Identities=19% Similarity=0.116 Sum_probs=50.7
Q ss_pred HHHHHHHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcChhhhhhhh
Q 015072 152 PTKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWVGKLVKKI 220 (413)
Q Consensus 152 ~~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~~~l~~~~ 220 (413)
+..+.+.+.+.+++.|++++.+ +|+++.. + ++.+.+++++| ++++|.||+|+|.++. +.+.+
T Consensus 55 ~~~~~~~l~~~~~~~gv~v~~~-~v~~i~~--~--~~~~~v~~~~g-~i~ad~vI~A~G~~~~-~~~~~ 116 (180)
T 2ywl_A 55 GEELLRRLEAHARRYGAEVRPG-VVKGVRD--M--GGVFEVETEEG-VEKAERLLLCTHKDPT-LPSLL 116 (180)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEC-CCCEEEE--C--SSSEEEECSSC-EEEEEEEEECCTTCCH-HHHHH
T ss_pred HHHHHHHHHHHHHHcCCEEEeC-EEEEEEE--c--CCEEEEEECCC-EEEECEEEECCCCCCC-ccccC
Confidence 4567778888888999999999 9999988 6 34578888888 6999999999999874 54544
No 90
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.26 E-value=1e-11 Score=119.43 Aligned_cols=61 Identities=20% Similarity=0.287 Sum_probs=49.4
Q ss_pred eecHHHHHHHHHHHHHH-cCCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcCh
Q 015072 149 VIKPTKAVSMFQTLAIK-NGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWV 213 (413)
Q Consensus 149 ~~~~~~~~~~l~~~~~~-~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~ 213 (413)
.++...+.+.+.+.+++ .|++++ +++|++|.. ++ +..+.|.+.+|+++.|+.||+|||.++
T Consensus 119 ~~Dr~~~~~~L~~~Le~~~GVeI~-~~~Vt~L~~--e~-g~V~GV~t~dG~~i~AdaVVLATG~~s 180 (637)
T 2zxi_A 119 QADKKRYREYMKKVCENQENLYIK-QEEVVDIIV--KN-NQVVGVRTNLGVEYKTKAVVVTTGTFL 180 (637)
T ss_dssp EECHHHHHHHHHHHHHTCTTEEEE-ESCEEEEEE--SS-SBEEEEEETTSCEEECSEEEECCTTCB
T ss_pred hCCHHHHHHHHHHHHHhCCCCEEE-EeEEEEEEe--cC-CEEEEEEECCCcEEEeCEEEEccCCCc
Confidence 45677888899888887 589995 789999988 62 234568888888899999999999874
No 91
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.26 E-value=2e-11 Score=112.56 Aligned_cols=59 Identities=17% Similarity=0.164 Sum_probs=49.1
Q ss_pred cHHHHHHHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcChh
Q 015072 151 KPTKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWVG 214 (413)
Q Consensus 151 ~~~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~~ 214 (413)
.+..+...+.+.+.+.|++++++++|+++.. + ++.+.|.+.+++ +.+|+||+|+|.+..
T Consensus 86 ~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~--~--~~~~~v~~~~g~-~~~d~vVlAtG~~~~ 144 (369)
T 3d1c_A 86 SGETYAEYLQVVANHYELNIFENTVVTNISA--D--DAYYTIATTTET-YHADYIFVATGDYNF 144 (369)
T ss_dssp BHHHHHHHHHHHHHHTTCEEECSCCEEEEEE--C--SSSEEEEESSCC-EEEEEEEECCCSTTS
T ss_pred CHHHHHHHHHHHHHHcCCeEEeCCEEEEEEE--C--CCeEEEEeCCCE-EEeCEEEECCCCCCc
Confidence 4466777788888889999999999999998 6 346788887775 999999999999864
No 92
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.26 E-value=2.9e-11 Score=109.27 Aligned_cols=57 Identities=14% Similarity=0.116 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcCh
Q 015072 152 PTKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWV 213 (413)
Q Consensus 152 ~~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~ 213 (413)
+..+...+.+.+.+.|++++. ++|+++.. + ++.+.+.+.+++++.+|+||+|+|.+.
T Consensus 69 ~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~--~--~~~~~v~~~~g~~~~~d~lvlAtG~~~ 125 (323)
T 3f8d_A 69 ASDMIKVFNKHIEKYEVPVLL-DIVEKIEN--R--GDEFVVKTKRKGEFKADSVILGIGVKR 125 (323)
T ss_dssp HHHHHHHHHHHHHTTTCCEEE-SCEEEEEE--C----CEEEEESSSCEEEEEEEEECCCCEE
T ss_pred HHHHHHHHHHHHHHcCCEEEE-EEEEEEEe--c--CCEEEEEECCCCEEEcCEEEECcCCCC
Confidence 456777778888888999998 89999988 6 456888888877899999999999863
No 93
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.26 E-value=3.2e-11 Score=109.41 Aligned_cols=117 Identities=22% Similarity=0.338 Sum_probs=84.9
Q ss_pred CCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCCCCcceecccCCccccchHHHHHHHHHHHHHhcCCe
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESRTIRATYPEDYYHPMVLESSLLWEQAQSEIGYK 85 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (413)
+.+||+|||||++|+++|+.|+++|++|+|||+.+..++.. ...++. ..
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~---------~~~~~~----------------------~~ 54 (332)
T 3lzw_A 6 KVYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQL---------SALYPE----------------------KY 54 (332)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHH---------HHHCTT----------------------SE
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCcee---------hhcCCC----------------------ce
Confidence 45899999999999999999999999999999987643110 000000 00
Q ss_pred eEeeeeeeeeCCCChHHHHHHHHHHHhCCCCccccCHHHHHHhcCCcccCCCCeEEEEecCCeeecHHHHHHHHHHHHHH
Q 015072 86 VYFKAHQFDMGPSENKSLRSVIASCRKNSVPHQVLDCRQVLQKYSGRIEIPENWVGVTTELGGVIKPTKAVSMFQTLAIK 165 (413)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 165 (413)
+. .++. + + .+.+..+...+.+.+.+
T Consensus 55 -------~~---------------------------------~~~~-~--~------------~~~~~~~~~~~~~~~~~ 79 (332)
T 3lzw_A 55 -------IY---------------------------------DVAG-F--P------------KIRAQELINNLKEQMAK 79 (332)
T ss_dssp -------EC---------------------------------CSTT-C--S------------SEEHHHHHHHHHHHHTT
T ss_pred -------Ee---------------------------------ccCC-C--C------------CCCHHHHHHHHHHHHHH
Confidence 00 0000 0 0 12346777788888888
Q ss_pred cCCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcC
Q 015072 166 NGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAW 212 (413)
Q Consensus 166 ~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~ 212 (413)
.|++++++++|+++.. .+ ++.+.+.+.+|+ +.+|+||+|+|..
T Consensus 80 ~~~~~~~~~~v~~i~~--~~-~~~~~v~~~~g~-~~~d~vVlAtG~~ 122 (332)
T 3lzw_A 80 FDQTICLEQAVESVEK--QA-DGVFKLVTNEET-HYSKTVIITAGNG 122 (332)
T ss_dssp SCCEEECSCCEEEEEE--CT-TSCEEEEESSEE-EEEEEEEECCTTS
T ss_pred hCCcEEccCEEEEEEE--CC-CCcEEEEECCCE-EEeCEEEECCCCC
Confidence 8999999999999998 62 137888888887 9999999999984
No 94
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=99.23 E-value=6.9e-10 Score=104.31 Aligned_cols=59 Identities=19% Similarity=0.211 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEE-EEeCCccEEEeCeEEEcCCcChhhh
Q 015072 153 TKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVT-VVTSSGEEFWGKKCVVTAGAWVGKL 216 (413)
Q Consensus 153 ~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~-v~~~~g~~i~ad~vV~A~G~~~~~l 216 (413)
..+.+.|.+.+++.|++|+++++|++|.. + ++.+. |.+ +|+++.||+||+|+|.+...+
T Consensus 234 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~--~--~~~v~~v~~-~g~~~~ad~VV~a~~~~~~~~ 293 (433)
T 1d5t_A 234 GELPQGFARLSAIYGGTYMLNKPVDDIIM--E--NGKVVGVKS-EGEVARCKQLICDPSYVPDRV 293 (433)
T ss_dssp THHHHHHHHHHHHHTCCCBCSCCCCEEEE--E--TTEEEEEEE-TTEEEECSEEEECGGGCGGGE
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEE--e--CCEEEEEEE-CCeEEECCEEEECCCCCcccc
Confidence 68889999999889999999999999998 6 33443 444 677799999999999997533
No 95
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=99.23 E-value=1.2e-10 Score=114.73 Aligned_cols=186 Identities=14% Similarity=0.104 Sum_probs=97.2
Q ss_pred CCccEEEECCCHHHHHHHHHHH---H-cCCcEEEEcccCCCCCCCCCCCCCcceecc--cCCccccchHHHHHHHHHHHH
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLA---K-RGQKTLLLEQFDFLHHRGSSHGESRTIRAT--YPEDYYHPMVLESSLLWEQAQ 79 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~---~-~g~~V~lvE~~~~~~~~~~s~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 79 (413)
.++||+|||||++|+++|+.|+ + +|.+|+||||....++ ++. ..|..... +...............+....
T Consensus 21 ~~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~~~s--~~~-a~G~~~~~~~~~~~~~~g~~ds~~~~~~~~~ 97 (643)
T 1jnr_A 21 VETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAVERS--GAV-AQGLSAINTYIDLTGRSERQNTLEDYVRYVT 97 (643)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCTTTC--STT-TTCEEEESCCCCSSSSBSCCCCHHHHHHHHH
T ss_pred ccCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCCCCC--cce-ecccccccchhhHHHhcCCCCCHHHHHHHHH
Confidence 3589999999999999999999 6 8999999999876432 111 22222111 100000000000011122221
Q ss_pred HhcCCeeEeeeeeeeeCCCChHHHHHHHHHHHhCCCCccccCHHHHHHhcCCcccCCCCeEEEEecCCeeecHHHHHHHH
Q 015072 80 SEIGYKVYFKAHQFDMGPSENKSLRSVIASCRKNSVPHQVLDCRQVLQKYSGRIEIPENWVGVTTELGGVIKPTKAVSMF 159 (413)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 159 (413)
.. +... .....+.. -.....+...++...|+++..... .. +.....+ ...+++..+.+.+
T Consensus 98 ~~-g~~l-~d~~~v~~---~~~~~~~~i~~l~~~Gv~f~~~~~-------g~-~~~~~~~-------~~~~~g~~~~~~l 157 (643)
T 1jnr_A 98 LD-MMGL-AREDLVAD---YARHVDGTVHLFEKWGLPIWKTPD-------GK-YVREGQW-------QIMIHGESYKPII 157 (643)
T ss_dssp HH-TTTC-CCHHHHHH---HHHHHHHHHHHHHHTTCCBCBCTT-------SC-BCBSSSS-------CEEEEETTHHHHH
T ss_pred HH-hcCc-CcHHHHHH---HHHHHHHHHHHHHHcCCcceeCCC-------CC-ccCCCcc-------ccCCCcHHHHHHH
Confidence 11 1000 00000000 001112344556666765432210 00 0000000 0122345667777
Q ss_pred HHHHHHc-CC-eEecCceEEEEEeeeccC--CCcEEEE---eCCcc--EEEeCeEEEcCCcChhhh
Q 015072 160 QTLAIKN-GA-VLRDNTEVKTVLKVKDDV--RGGVTVV---TSSGE--EFWGKKCVVTAGAWVGKL 216 (413)
Q Consensus 160 ~~~~~~~-gv-~i~~~~~V~~i~~~~~~~--~~~~~v~---~~~g~--~i~ad~vV~A~G~~~~~l 216 (413)
.+.+++. |+ ++++++.|++|.. +++ +....|. ..+|+ .+.|+.||+|||.++..+
T Consensus 158 ~~~~~~~~gv~~i~~~~~v~~L~~--~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~~~y 221 (643)
T 1jnr_A 158 AEAAKMAVGEENIYERVFIFELLK--DNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGATLLF 221 (643)
T ss_dssp HHHHHHHHCGGGEECSEEEEEEEE--CTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCSSS
T ss_pred HHHHHhcCCCcEEEecCEEEEEEE--cCCccceeEEEEEEEecCCcEEEEEcCEEEECCCcccccc
Confidence 7888777 99 9999999999998 632 1222232 24555 689999999999988643
No 96
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.22 E-value=1.5e-10 Score=104.18 Aligned_cols=119 Identities=20% Similarity=0.275 Sum_probs=79.4
Q ss_pred CCCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCCCCcceecccCCccccchHHHHHHHHHHHHHhcCC
Q 015072 5 GENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESRTIRATYPEDYYHPMVLESSLLWEQAQSEIGY 84 (413)
Q Consensus 5 ~~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (413)
++.|||+|||||++|+++|.+|+++|++|+|||+...++.+. .|.+....
T Consensus 2 ~~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~~-----~G~~~~~~------------------------- 51 (314)
T 4a5l_A 2 SNIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAA-----GGQLTTTT------------------------- 51 (314)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCCT-----TCGGGGSS-------------------------
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCccc-----CCCcCChH-------------------------
Confidence 345999999999999999999999999999999976543211 01111000
Q ss_pred eeEeeeeeeeeCCCChHHHHHHHHHHHhCCCCccccCHHHHHHhcCCcccCCCCeEEEEecCCeeecHHHHHHHHHHHHH
Q 015072 85 KVYFKAHQFDMGPSENKSLRSVIASCRKNSVPHQVLDCRQVLQKYSGRIEIPENWVGVTTELGGVIKPTKAVSMFQTLAI 164 (413)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 164 (413)
. .. .+|. + +. .+++.++...+.+.+.
T Consensus 52 ~-i~---------------------------------------~~~g-~--~~-----------~i~~~~l~~~~~~~~~ 77 (314)
T 4a5l_A 52 I-IE---------------------------------------NFPG-F--PN-----------GIDGNELMMNMRTQSE 77 (314)
T ss_dssp E-EC---------------------------------------CSTT-C--TT-----------CEEHHHHHHHHHHHHH
T ss_pred H-hh---------------------------------------hccC-C--cc-----------cCCHHHHHHHHHHHHh
Confidence 0 00 0010 0 00 1234566677777788
Q ss_pred HcCCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcC
Q 015072 165 KNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAW 212 (413)
Q Consensus 165 ~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~ 212 (413)
+.+.++.. ..|..+.. . .....+.+.++.++.+|+||+|||+.
T Consensus 78 ~~~~~~~~-~~v~~~~~--~--~~~~~~~~~~~~~~~~~~liiATG~~ 120 (314)
T 4a5l_A 78 KYGTTIIT-ETIDHVDF--S--TQPFKLFTEEGKEVLTKSVIIATGAT 120 (314)
T ss_dssp HTTCEEEC-CCEEEEEC--S--SSSEEEEETTCCEEEEEEEEECCCEE
T ss_pred hcCcEEEE-eEEEEeec--C--CCceEEEECCCeEEEEeEEEEccccc
Confidence 88888874 45666666 4 35566667788889999999999974
No 97
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.22 E-value=2.1e-11 Score=117.78 Aligned_cols=62 Identities=18% Similarity=0.217 Sum_probs=50.0
Q ss_pred eeecHHHHHHHHHHHHHH-cCCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcCh
Q 015072 148 GVIKPTKAVSMFQTLAIK-NGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWV 213 (413)
Q Consensus 148 ~~~~~~~~~~~l~~~~~~-~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~ 213 (413)
..++...+.+.+.+.+++ .|++++ +++|++|.. ++ +..+.|.+.+|.++.||.||+|+|.++
T Consensus 119 ~~~Dr~~~~~~L~e~Le~~~GV~I~-~~~V~~L~~--e~-g~V~GV~t~dG~~I~Ad~VVLATGt~s 181 (651)
T 3ces_A 119 AQADRVLYRQAVRTALENQPNLMIF-QQAVEDLIV--EN-DRVVGAVTQMGLKFRAKAVVLTVGTFL 181 (651)
T ss_dssp EEECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEE--SS-SBEEEEEETTSEEEEEEEEEECCSTTT
T ss_pred hhCCHHHHHHHHHHHHHhCCCCEEE-EEEEEEEEe--cC-CEEEEEEECCCCEEECCEEEEcCCCCc
Confidence 346777888889888887 699995 689999987 62 244578888888899999999999975
No 98
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.22 E-value=1.2e-10 Score=111.36 Aligned_cols=135 Identities=16% Similarity=0.121 Sum_probs=87.3
Q ss_pred CCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCCCCcceecccCCccccchHHHHHHHHHHHHHhcCCe
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESRTIRATYPEDYYHPMVLESSLLWEQAQSEIGYK 85 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (413)
..+||+|||||++|+++|..|+++|++|+|||+.+..+.. . .. .+...+...+. .++..
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~-~------~~----------~~~~~~~~~l~----~~g~~ 149 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRH-N------VL----------HLWPFTIHDLR----ALGAK 149 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCC-C------EE----------ECCHHHHHHHH----TTTHH
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCC-C------cc----------cCChhHHHHHH----HcCCc
Confidence 4689999999999999999999999999999998765311 0 00 00011111111 11100
Q ss_pred eEeeeeeeeeCCCChHHHHHHHHHHHhCCCCccccCHHHHHHhcCCcccCCCCeEEEEecCCeeecHHHHHHHHHHHHHH
Q 015072 86 VYFKAHQFDMGPSENKSLRSVIASCRKNSVPHQVLDCRQVLQKYSGRIEIPENWVGVTTELGGVIKPTKAVSMFQTLAIK 165 (413)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 165 (413)
.. .+ . +.. .. -..++...+.+.|.+.+.+
T Consensus 150 ----------------------~~---~~---~----------~~~----~~---------~~~~~~~~l~~~L~~~~~~ 178 (497)
T 2bry_A 150 ----------------------KF---YG---R----------FCT----GT---------LDHISIRQLQLLLLKVALL 178 (497)
T ss_dssp ----------------------HH---CT---T----------TTC----TT---------CCEEEHHHHHHHHHHHHHH
T ss_pred ----------------------cc---cc---c----------ccc----cc---------cccCCHHHHHHHHHHHHHh
Confidence 00 00 0 000 00 0123446788888888888
Q ss_pred cCCeEecCceEEEEEeeecc-CCCcEEEEe--C-Cc--cEEEeCeEEEcCCcChh
Q 015072 166 NGAVLRDNTEVKTVLKVKDD-VRGGVTVVT--S-SG--EEFWGKKCVVTAGAWVG 214 (413)
Q Consensus 166 ~gv~i~~~~~V~~i~~~~~~-~~~~~~v~~--~-~g--~~i~ad~vV~A~G~~~~ 214 (413)
.|++++++++|+++.. ++ ++..+.|++ . +| +++++|.||+|+|.++.
T Consensus 179 ~gv~v~~~~~v~~i~~--~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~ 231 (497)
T 2bry_A 179 LGVEIHWGVKFTGLQP--PPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFV 231 (497)
T ss_dssp TTCEEEESCEEEEEEC--CCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCC
T ss_pred CCCEEEeCCEEEEEEE--ecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCcc
Confidence 9999999999999987 52 124556655 4 66 36999999999999874
No 99
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.21 E-value=2.9e-10 Score=109.74 Aligned_cols=62 Identities=16% Similarity=0.238 Sum_probs=49.2
Q ss_pred eeecHHHHHHHHHHHHHHc-CCeEecCceEEEEEeeeccCCCcE-EEEeCCccEEEeCeEEEcCCcChh
Q 015072 148 GVIKPTKAVSMFQTLAIKN-GAVLRDNTEVKTVLKVKDDVRGGV-TVVTSSGEEFWGKKCVVTAGAWVG 214 (413)
Q Consensus 148 ~~~~~~~~~~~l~~~~~~~-gv~i~~~~~V~~i~~~~~~~~~~~-~v~~~~g~~i~ad~vV~A~G~~~~ 214 (413)
..++...+.+.+.+.+++. |++++ +..|+++.. + ++.+ .|.+.+|+++.||.||+|+|.|+.
T Consensus 112 ~~~Dr~~l~~~L~~~l~~~~GV~I~-~~~V~~L~~--d--~g~V~GV~t~~G~~i~Ad~VVLATG~~s~ 175 (641)
T 3cp8_A 112 AQADKTQYSLYMRRIVEHEPNIDLL-QDTVIGVSA--N--SGKFSSVTVRSGRAIQAKAAILACGTFLN 175 (641)
T ss_dssp EEECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEE--E--TTEEEEEEETTSCEEEEEEEEECCTTCBT
T ss_pred hhcCHHHHHHHHHHHHHhCCCCEEE-eeEEEEEEe--c--CCEEEEEEECCCcEEEeCEEEECcCCCCC
Confidence 3567778888888888874 89986 568999987 6 3334 477888888999999999998854
No 100
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.20 E-value=9.9e-11 Score=111.06 Aligned_cols=71 Identities=18% Similarity=0.088 Sum_probs=52.6
Q ss_pred ecHHHHHHHHHHHHHHcCCe--EecCceEEEEEeeeccCCCcEEEEeCC---c--cEEEeCeEEEcCCcChhhhhhhhcC
Q 015072 150 IKPTKAVSMFQTLAIKNGAV--LRDNTEVKTVLKVKDDVRGGVTVVTSS---G--EEFWGKKCVVTAGAWVGKLVKKISG 222 (413)
Q Consensus 150 ~~~~~~~~~l~~~~~~~gv~--i~~~~~V~~i~~~~~~~~~~~~v~~~~---g--~~i~ad~vV~A~G~~~~~l~~~~~g 222 (413)
.....+.+.+.+.+.+.|++ ++++++|++|.. .++...+.|++.+ | .++.+|+||+|+|.++.+..+.+.|
T Consensus 98 ~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~--~~~~~~~~V~~~~~~~g~~~~~~~d~VVvAtG~~s~p~~p~ipG 175 (464)
T 2xve_A 98 PPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEF--NEDSQTFTVTVQDHTTDTIYSEEFDYVVCCTGHFSTPYVPEFEG 175 (464)
T ss_dssp CBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEE--ETTTTEEEEEEEETTTTEEEEEEESEEEECCCSSSSBCCCCCBT
T ss_pred CCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEE--cCCCCcEEEEEEEcCCCceEEEEcCEEEECCCCCCCCccCCCCC
Confidence 34567788888888888988 889999999998 6332367776543 4 4689999999999877655444434
No 101
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=99.19 E-value=1.5e-10 Score=109.94 Aligned_cols=59 Identities=12% Similarity=0.132 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEE-eCCccEEEeCeEEEcCCcChh
Q 015072 152 PTKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVV-TSSGEEFWGKKCVVTAGAWVG 214 (413)
Q Consensus 152 ~~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~-~~~g~~i~ad~vV~A~G~~~~ 214 (413)
+..+.+.+.+.+++.|++++.+++|+++.. +++ +.+.|+ +++|+ +.+|.||+|+|.+.+
T Consensus 210 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~--~~~-~~~~v~~~~~g~-i~aD~Vv~a~G~~p~ 269 (463)
T 4dna_A 210 DQDMRRGLHAAMEEKGIRILCEDIIQSVSA--DAD-GRRVATTMKHGE-IVADQVMLALGRMPN 269 (463)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEE--CTT-SCEEEEESSSCE-EEESEEEECSCEEES
T ss_pred CHHHHHHHHHHHHHCCCEEECCCEEEEEEE--cCC-CEEEEEEcCCCe-EEeCEEEEeeCcccC
Confidence 356778888889999999999999999988 622 336788 88888 999999999998765
No 102
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=99.18 E-value=3.5e-10 Score=112.92 Aligned_cols=43 Identities=40% Similarity=0.404 Sum_probs=38.0
Q ss_pred CCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCC
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSS 48 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~~~~~~s 48 (413)
..+||+|||||++|+++|+.|++.|++|+|+|+.+..|++..+
T Consensus 335 ~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ggri~T 377 (776)
T 4gut_A 335 HNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGGRVWD 377 (776)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTTCCE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceeceeee
Confidence 3579999999999999999999999999999998887765433
No 103
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=99.18 E-value=1.4e-09 Score=101.80 Aligned_cols=69 Identities=14% Similarity=0.108 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcChh-hhhhhhcCCC
Q 015072 152 PTKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWVG-KLVKKISGLE 224 (413)
Q Consensus 152 ~~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~~-~l~~~~~g~~ 224 (413)
+..+.+.+.+.+++.|++++++++|+++.. +++ ....|++++|+++.||.||+|+|...+ .++... |+.
T Consensus 193 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~--~~~-~v~~v~l~dG~~i~aD~Vv~a~G~~p~~~l~~~~-gl~ 262 (415)
T 3lxd_A 193 GEALSEFYQAEHRAHGVDLRTGAAMDCIEG--DGT-KVTGVRMQDGSVIPADIVIVGIGIVPCVGALISA-GAS 262 (415)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETCCEEEEEE--SSS-BEEEEEESSSCEEECSEEEECSCCEESCHHHHHT-TCC
T ss_pred CHHHHHHHHHHHHhCCCEEEECCEEEEEEe--cCC-cEEEEEeCCCCEEEcCEEEECCCCccChHHHHhC-CCC
Confidence 467788888889999999999999999988 621 334688889988999999999998765 465554 543
No 104
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.18 E-value=1.1e-10 Score=104.83 Aligned_cols=58 Identities=17% Similarity=0.235 Sum_probs=46.6
Q ss_pred cHHHHHHHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcCh
Q 015072 151 KPTKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWV 213 (413)
Q Consensus 151 ~~~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~ 213 (413)
++..+.+.+.+.+.+.|++++. ++|+++.. + ++.+.+.+.+|+++.+|+||+|+|.+.
T Consensus 57 ~~~~~~~~l~~~~~~~~v~~~~-~~v~~i~~--~--~~~~~v~~~~g~~~~~~~vv~AtG~~~ 114 (311)
T 2q0l_A 57 SGLDFMQPWQEQCFRFGLKHEM-TAVQRVSK--K--DSHFVILAEDGKTFEAKSVIIATGGSP 114 (311)
T ss_dssp CHHHHHHHHHHHHHTTSCEEEC-SCEEEEEE--E--TTEEEEEETTSCEEEEEEEEECCCEEE
T ss_pred CHHHHHHHHHHHHHHcCCEEEE-EEEEEEEE--c--CCEEEEEEcCCCEEECCEEEECCCCCC
Confidence 3456677777778888999987 78999988 6 456778777887899999999999754
No 105
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.18 E-value=1.2e-10 Score=106.02 Aligned_cols=57 Identities=16% Similarity=0.134 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEe---CCccEEEeCeEEEcCCcCh
Q 015072 152 PTKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVT---SSGEEFWGKKCVVTAGAWV 213 (413)
Q Consensus 152 ~~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~---~~g~~i~ad~vV~A~G~~~ 213 (413)
+..+...+.+.+.+.|++++.++ |+++.. + ...+.+.+ .++.++.+|+||+|+|...
T Consensus 83 ~~~~~~~~~~~~~~~gv~i~~~~-v~~i~~--~--~~~~~v~~~~~~~~~~~~~d~vvlAtG~~~ 142 (338)
T 3itj_A 83 GSELMDRMREQSTKFGTEIITET-VSKVDL--S--SKPFKLWTEFNEDAEPVTTDAIILATGASA 142 (338)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSC-EEEEEC--S--SSSEEEEETTCSSSCCEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHHHHHcCCEEEEeE-EEEEEE--c--CCEEEEEEEecCCCcEEEeCEEEECcCCCc
Confidence 46777788888888999999888 999988 6 46677776 3566799999999999853
No 106
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.17 E-value=7e-11 Score=107.32 Aligned_cols=58 Identities=14% Similarity=0.149 Sum_probs=46.4
Q ss_pred cHHHHHHHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcChh
Q 015072 151 KPTKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWVG 214 (413)
Q Consensus 151 ~~~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~~ 214 (413)
++..+...+.+.+.+.|++++.++ |+++.. . .+.+.|.+ +++++++|+||+|+|.+..
T Consensus 68 ~~~~~~~~l~~~~~~~gv~~~~~~-v~~i~~--~--~~~~~v~~-~~~~~~~~~vv~A~G~~~~ 125 (333)
T 1vdc_A 68 LGVELTDKFRKQSERFGTTIFTET-VTKVDF--S--SKPFKLFT-DSKAILADAVILAIGAVAK 125 (333)
T ss_dssp EHHHHHHHHHHHHHHTTCEEECCC-CCEEEC--S--SSSEEEEC-SSEEEEEEEEEECCCEEEC
T ss_pred CHHHHHHHHHHHHHHCCCEEEEeE-EEEEEE--c--CCEEEEEE-CCcEEEcCEEEECCCCCcC
Confidence 345677777788888899999876 999987 6 45677877 6777999999999998753
No 107
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.17 E-value=2e-10 Score=102.45 Aligned_cols=56 Identities=9% Similarity=0.007 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHHc-CCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcCh
Q 015072 153 TKAVSMFQTLAIKN-GAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWV 213 (413)
Q Consensus 153 ~~~~~~l~~~~~~~-gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~ 213 (413)
..+...+.+.+.+. +++++ +++|+++.. + ++.+.+.+.+++++.+|+||+|+|...
T Consensus 56 ~~~~~~~~~~~~~~~~v~~~-~~~v~~i~~--~--~~~~~v~~~~g~~~~~d~vviAtG~~~ 112 (297)
T 3fbs_A 56 GEIIAEARRQIERYPTIHWV-EGRVTDAKG--S--FGEFIVEIDGGRRETAGRLILAMGVTD 112 (297)
T ss_dssp HHHHHHHHHHHTTCTTEEEE-ESCEEEEEE--E--TTEEEEEETTSCEEEEEEEEECCCCEE
T ss_pred HHHHHHHHHHHHhcCCeEEE-EeEEEEEEE--c--CCeEEEEECCCCEEEcCEEEECCCCCC
Confidence 55666676777666 67776 468999988 6 456888888888899999999999854
No 108
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=99.16 E-value=7.5e-10 Score=105.02 Aligned_cols=45 Identities=33% Similarity=0.333 Sum_probs=40.0
Q ss_pred CCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCC
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHG 50 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~~~~~~s~~ 50 (413)
.++||+|||||++|+++|+.|+++|++|+|+|+.+..||+..+..
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~ 48 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTWTDT 48 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCCEEE
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCceeccc
Confidence 468999999999999999999999999999999988877765543
No 109
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=99.15 E-value=4.9e-10 Score=105.31 Aligned_cols=49 Identities=22% Similarity=0.338 Sum_probs=42.7
Q ss_pred CCCccEEEECCCHHHHHHHHHHHHcC-CcEEEEcccCCCCCCCCCCCCCc
Q 015072 5 GENFDVIVVGAGIMGSSAAYQLAKRG-QKTLLLEQFDFLHHRGSSHGESR 53 (413)
Q Consensus 5 ~~~~dvvIIGgG~aG~~~A~~L~~~g-~~V~lvE~~~~~~~~~~s~~~~~ 53 (413)
.+++||+|||||++|+++|+.|+++| ++|+|+|+.+..||+..+....|
T Consensus 4 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~~t~~~~G 53 (424)
T 2b9w_A 4 SKDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCHSPNYHG 53 (424)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCCCCEETT
T ss_pred CCCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcccccCCCC
Confidence 45689999999999999999999999 89999999999888777654433
No 110
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.15 E-value=2.4e-10 Score=103.11 Aligned_cols=55 Identities=20% Similarity=0.403 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcCh
Q 015072 153 TKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWV 213 (413)
Q Consensus 153 ~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~ 213 (413)
..+...+.+.+.+.|++++. .+|+++.. + ++.+.|.+ +++++.+|+||+|+|.+.
T Consensus 72 ~~~~~~~~~~~~~~~v~~~~-~~v~~i~~--~--~~~~~v~~-~~~~~~~~~li~AtG~~~ 126 (319)
T 3cty_A 72 SELAKLFADHAANYAKIREG-VEVRSIKK--T--QGGFDIET-NDDTYHAKYVIITTGTTH 126 (319)
T ss_dssp HHHHHHHHHHHHTTSEEEET-CCEEEEEE--E--TTEEEEEE-SSSEEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHHHHcCCEEEE-eeEEEEEE--e--CCEEEEEE-CCCEEEeCEEEECCCCCc
Confidence 45566667777788999987 78999987 6 35566766 455699999999999754
No 111
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=99.15 E-value=2e-10 Score=110.09 Aligned_cols=45 Identities=29% Similarity=0.341 Sum_probs=40.0
Q ss_pred CCCCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCC
Q 015072 4 SGENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSS 48 (413)
Q Consensus 4 ~~~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~~~~~~s 48 (413)
+.+.+||+|||||++|+++|+.|+++|++|+|+|+.+..||+..+
T Consensus 8 ~~~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~~~~ 52 (489)
T 2jae_A 8 VKGSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGRVWT 52 (489)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCCE
T ss_pred ccCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCceee
Confidence 345689999999999999999999999999999999988876544
No 112
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=99.15 E-value=5.4e-10 Score=106.52 Aligned_cols=44 Identities=27% Similarity=0.242 Sum_probs=39.5
Q ss_pred CCCccEEEECCCHHHHHHHHHHHHcC-CcEEEEcccCCCCCCCCC
Q 015072 5 GENFDVIVVGAGIMGSSAAYQLAKRG-QKTLLLEQFDFLHHRGSS 48 (413)
Q Consensus 5 ~~~~dvvIIGgG~aG~~~A~~L~~~g-~~V~lvE~~~~~~~~~~s 48 (413)
.+.+||+|||||++|+++|++|+++| .+|+|+|+.+..||...+
T Consensus 7 ~~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~~ 51 (484)
T 4dsg_A 7 LLTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSRS 51 (484)
T ss_dssp CCSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGCE
T ss_pred ccCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeeee
Confidence 34689999999999999999999998 799999999888777665
No 113
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=99.13 E-value=1.3e-09 Score=101.00 Aligned_cols=67 Identities=19% Similarity=0.107 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcChh-hhhhhhcCC
Q 015072 152 PTKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWVG-KLVKKISGL 223 (413)
Q Consensus 152 ~~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~~-~l~~~~~g~ 223 (413)
+..+.+.+.+.+++.|++++++++|+++.. + ++.+.+.+++|+++.+|.||+|+|.+.+ .+++.+ |+
T Consensus 186 ~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~--~--~~~~~v~~~~g~~i~~d~vv~a~G~~p~~~l~~~~-g~ 253 (384)
T 2v3a_A 186 HPAAAKAVQAGLEGLGVRFHLGPVLASLKK--A--GEGLEAHLSDGEVIPCDLVVSAVGLRPRTELAFAA-GL 253 (384)
T ss_dssp CHHHHHHHHHHHHTTTCEEEESCCEEEEEE--E--TTEEEEEETTSCEEEESEEEECSCEEECCHHHHHT-TC
T ss_pred CHHHHHHHHHHHHHcCCEEEeCCEEEEEEe--c--CCEEEEEECCCCEEECCEEEECcCCCcCHHHHHHC-CC
Confidence 567788888888899999999999999988 6 3567788888888999999999998866 365554 54
No 114
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=99.13 E-value=9.2e-10 Score=106.11 Aligned_cols=45 Identities=38% Similarity=0.458 Sum_probs=40.8
Q ss_pred CCccEEEECCCHHHHHHHHHHHHcC-CcEEEEcccCCCCCCCCCCC
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAKRG-QKTLLLEQFDFLHHRGSSHG 50 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~~g-~~V~lvE~~~~~~~~~~s~~ 50 (413)
+++||+|||||++|+++|+.|+++| ++|+|+|+.+..||+..+..
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~~t~~ 52 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRLQTVT 52 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTCCEEE
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCceeeee
Confidence 4689999999999999999999999 99999999999988876643
No 115
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=99.13 E-value=1.2e-09 Score=104.85 Aligned_cols=59 Identities=20% Similarity=0.292 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcChh
Q 015072 152 PTKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWVG 214 (413)
Q Consensus 152 ~~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~~ 214 (413)
+..+.+.+.+.+++.|++++++++|+++.. + ++.+.+.+.+|+++.+|.||+|+|.+.+
T Consensus 222 d~~~~~~l~~~l~~~GV~i~~~~~V~~i~~--~--~~~v~v~~~~g~~i~aD~Vv~a~G~~p~ 280 (499)
T 1xdi_A 222 DADAALVLEESFAERGVRLFKNARAASVTR--T--GAGVLVTMTDGRTVEGSHALMTIGSVPN 280 (499)
T ss_dssp SHHHHHHHHHHHHHTTCEEETTCCEEEEEE--C--SSSEEEEETTSCEEEESEEEECCCEEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCEEEEEEE--e--CCEEEEEECCCcEEEcCEEEECCCCCcC
Confidence 346778888889999999999999999988 6 3457787888888999999999998765
No 116
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.13 E-value=1.3e-09 Score=97.46 Aligned_cols=37 Identities=32% Similarity=0.389 Sum_probs=34.3
Q ss_pred CccEEEECCCHHHHHHHHHHHHc--CCcEEEEcccCCCC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKR--GQKTLLLEQFDFLH 43 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~--g~~V~lvE~~~~~~ 43 (413)
++||+|||||++|+++|+.|+++ |++|+|||+....+
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~G 117 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPG 117 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccC
Confidence 58999999999999999999997 99999999987664
No 117
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.12 E-value=2.6e-10 Score=103.12 Aligned_cols=58 Identities=22% Similarity=0.172 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHHcCCeEecCceEEEEEeeecc-CCCcEEEEeCCccEEEeCeEEEcCCcCh
Q 015072 153 TKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDD-VRGGVTVVTSSGEEFWGKKCVVTAGAWV 213 (413)
Q Consensus 153 ~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~-~~~~~~v~~~~g~~i~ad~vV~A~G~~~ 213 (413)
..+.+.+.+.+.+.|++++. .+|+++.. +. ++..+.+.+.+|+++.+|+||+|+|.+.
T Consensus 65 ~~~~~~l~~~~~~~gv~~~~-~~v~~i~~--~~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~ 123 (325)
T 2q7v_A 65 MELAQRMHQQAEKFGAKVEM-DEVQGVQH--DATSHPYPFTVRGYNGEYRAKAVILATGADP 123 (325)
T ss_dssp HHHHHHHHHHHHHTTCEEEE-CCEEEEEE--CTTSSSCCEEEEESSCEEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHHHHcCCEEEe-eeEEEEEe--ccCCCceEEEEECCCCEEEeCEEEECcCCCc
Confidence 55666777778888999986 68999987 51 1122667667777899999999999854
No 118
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=99.12 E-value=6.7e-10 Score=105.81 Aligned_cols=65 Identities=17% Similarity=0.208 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcChh-hhhhhh
Q 015072 152 PTKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWVG-KLVKKI 220 (413)
Q Consensus 152 ~~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~~-~l~~~~ 220 (413)
+..+.+.+.+.+++.|++++++++|+++.. + ++.+.+.+.+|+++.+|.||+|+|...+ .++..+
T Consensus 201 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~--~--~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~~l~~~~ 266 (472)
T 3iwa_A 201 SKSLSQMLRHDLEKNDVVVHTGEKVVRLEG--E--NGKVARVITDKRTLDADLVILAAGVSPNTQLARDA 266 (472)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEE--S--SSBEEEEEESSCEEECSEEEECSCEEECCHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCEEEeCCEEEEEEc--c--CCeEEEEEeCCCEEEcCEEEECCCCCcCHHHHHhC
Confidence 356778888889999999999999999988 6 4556677778888999999999998755 455554
No 119
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.12 E-value=4.2e-10 Score=101.14 Aligned_cols=38 Identities=29% Similarity=0.367 Sum_probs=34.5
Q ss_pred CCCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCC
Q 015072 5 GENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFL 42 (413)
Q Consensus 5 ~~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~ 42 (413)
+.+|||+|||||++|+++|.+|+++|++|+|||++..+
T Consensus 4 e~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~~g 41 (312)
T 4gcm_A 4 EIDFDIAIIGAGPAGMTAAVYASRANLKTVMIERGIPG 41 (312)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCC
Confidence 34799999999999999999999999999999987544
No 120
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=99.12 E-value=5.5e-10 Score=106.96 Aligned_cols=59 Identities=15% Similarity=0.228 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeC---Cc--cEEEeCeEEEcCCcChh
Q 015072 152 PTKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTS---SG--EEFWGKKCVVTAGAWVG 214 (413)
Q Consensus 152 ~~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~---~g--~~i~ad~vV~A~G~~~~ 214 (413)
+..+.+.+.+.+++.|++++.+++|+++.. + ++.+.+... +| +++.+|.||+|+|...+
T Consensus 238 d~~~~~~l~~~l~~~gV~v~~~~~v~~i~~--~--~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~~p~ 301 (491)
T 3urh_A 238 DGEVAKQLQRMLTKQGIDFKLGAKVTGAVK--S--GDGAKVTFEPVKGGEATTLDAEVVLIATGRKPS 301 (491)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSEEEEEEEE--E--TTEEEEEEEETTSCCCEEEEESEEEECCCCEEC
T ss_pred CHHHHHHHHHHHHhCCCEEEECCeEEEEEE--e--CCEEEEEEEecCCCceEEEEcCEEEEeeCCccC
Confidence 356777888888899999999999999988 6 344444433 14 47999999999997543
No 121
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=99.12 E-value=5e-10 Score=105.89 Aligned_cols=59 Identities=17% Similarity=0.121 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcChh
Q 015072 153 TKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWVG 214 (413)
Q Consensus 153 ~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~~ 214 (413)
..+.+.+.+.+++.|++++++++|+++.. +++ +.+.+.+.+|+++.+|.||+|+|...+
T Consensus 208 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~--~~~-~~~~v~~~~g~~i~~D~vv~a~G~~p~ 266 (450)
T 1ges_A 208 PMISETLVEVMNAEGPQLHTNAIPKAVVK--NTD-GSLTLELEDGRSETVDCLIWAIGREPA 266 (450)
T ss_dssp HHHHHHHHHHHHHHSCEEECSCCEEEEEE--CTT-SCEEEEETTSCEEEESEEEECSCEEES
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEE--eCC-cEEEEEECCCcEEEcCEEEECCCCCcC
Confidence 46777888888889999999999999988 622 346788888888999999999998654
No 122
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=99.09 E-value=5.4e-10 Score=106.33 Aligned_cols=58 Identities=17% Similarity=0.193 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcChh
Q 015072 152 PTKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWVG 214 (413)
Q Consensus 152 ~~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~~ 214 (413)
+..+.+.+.+.+++.|++++++++|+++.. + +..+.+.++++ ++.+|.||+|+|.+.+
T Consensus 215 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~--~--~~~~~v~~~~~-~i~aD~Vv~a~G~~p~ 272 (467)
T 1zk7_A 215 DPAIGEAVTAAFRAEGIEVLEHTQASQVAH--M--DGEFVLTTTHG-ELRADKLLVATGRTPN 272 (467)
T ss_dssp CHHHHHHHHHHHHHTTCEEETTCCEEEEEE--E--TTEEEEEETTE-EEEESEEEECSCEEES
T ss_pred CHHHHHHHHHHHHhCCCEEEcCCEEEEEEE--e--CCEEEEEECCc-EEEcCEEEECCCCCcC
Confidence 456788888889999999999999999988 6 34566766644 5999999999998765
No 123
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=99.08 E-value=5.2e-10 Score=106.67 Aligned_cols=60 Identities=10% Similarity=-0.008 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeCCc-cEEEeCeEEEcCCcChh
Q 015072 153 TKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSG-EEFWGKKCVVTAGAWVG 214 (413)
Q Consensus 153 ~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g-~~i~ad~vV~A~G~~~~ 214 (413)
..+.+.+.+.+++.|++++++++|+++.. ++++..+.+.+++| +++.+|.||+|+|...+
T Consensus 226 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~--~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~ 286 (479)
T 2hqm_A 226 ECIQNTITDHYVKEGINVHKLSKIVKVEK--NVETDKLKIHMNDSKSIDDVDELIWTIGRKSH 286 (479)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEE--CC-CCCEEEEETTSCEEEEESEEEECSCEEEC
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEE--cCCCcEEEEEECCCcEEEEcCEEEECCCCCCc
Confidence 46777788888889999999999999987 52222367888888 67999999999997554
No 124
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=99.08 E-value=3.6e-09 Score=94.04 Aligned_cols=38 Identities=42% Similarity=0.443 Sum_probs=34.7
Q ss_pred CCccEEEECCCHHHHHHHHHHHHc--CCcEEEEcccCCCC
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAKR--GQKTLLLEQFDFLH 43 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~~--g~~V~lvE~~~~~~ 43 (413)
.++||+|||||++|+++|+.|+++ |++|+|+|+.+..+
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~g 103 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPG 103 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCC
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCcccc
Confidence 347999999999999999999998 99999999987765
No 125
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=99.08 E-value=7.2e-09 Score=96.59 Aligned_cols=70 Identities=17% Similarity=0.179 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcChh-hhhhhhcCCCc
Q 015072 152 PTKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWVG-KLVKKISGLEL 225 (413)
Q Consensus 152 ~~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~~-~l~~~~~g~~~ 225 (413)
+..+.+.+.+.+++.|++++++++|+++.. ++ +....|++++|+++.||.||+|+|...+ .+++.. |+..
T Consensus 183 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~--~~-~~v~~V~~~dG~~i~aD~Vv~a~G~~p~~~l~~~~-gl~~ 253 (404)
T 3fg2_P 183 TPEISSYFHDRHSGAGIRMHYGVRATEIAA--EG-DRVTGVVLSDGNTLPCDLVVVGVGVIPNVEIAAAA-GLPT 253 (404)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEE--ET-TEEEEEEETTSCEEECSEEEECCCEEECCHHHHHT-TCCB
T ss_pred CHHHHHHHHHHHHhCCcEEEECCEEEEEEe--cC-CcEEEEEeCCCCEEEcCEEEECcCCccCHHHHHhC-CCCC
Confidence 467788888889999999999999999988 62 2344678889988999999999998765 466655 5433
No 126
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=99.07 E-value=9.4e-10 Score=106.30 Aligned_cols=36 Identities=28% Similarity=0.510 Sum_probs=33.0
Q ss_pred CCCccEEEECCCHHHHHHHHHHHHc-CCcEEEEcccC
Q 015072 5 GENFDVIVVGAGIMGSSAAYQLAKR-GQKTLLLEQFD 40 (413)
Q Consensus 5 ~~~~dvvIIGgG~aG~~~A~~L~~~-g~~V~lvE~~~ 40 (413)
..+||+||||||.+|+.+|.+|++. +.+|+|||++.
T Consensus 17 ~~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 17 GRTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 3579999999999999999999985 78999999987
No 127
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=99.06 E-value=1.1e-09 Score=105.09 Aligned_cols=57 Identities=11% Similarity=0.038 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcCh
Q 015072 153 TKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWV 213 (413)
Q Consensus 153 ~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~ 213 (413)
.++.+.+.+.+++.|+++++++.|+++.. . ++.+.+...+++++.+|.|++|+|-..
T Consensus 263 ~ei~~~l~~~l~~~gi~~~~~~~v~~~~~--~--~~~~~v~~~~~~~~~~D~vLvAvGR~P 319 (542)
T 4b1b_A 263 QQCAVKVKLYMEEQGVMFKNGILPKKLTK--M--DDKILVEFSDKTSELYDTVLYAIGRKG 319 (542)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEE--E--TTEEEEEETTSCEEEESEEEECSCEEE
T ss_pred hhHHHHHHHHHHhhcceeecceEEEEEEe--c--CCeEEEEEcCCCeEEEEEEEEcccccC
Confidence 56778888999999999999999999998 6 467778888888899999999999653
No 128
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=99.06 E-value=1e-10 Score=109.93 Aligned_cols=36 Identities=17% Similarity=0.141 Sum_probs=32.3
Q ss_pred CCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCC
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDF 41 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~ 41 (413)
+++||+|||||++|+++|+.|+++|++|+|||+...
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~~ 56 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRKP 56 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCCG
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCCh
Confidence 457999999999999999999999999999999763
No 129
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=99.06 E-value=8.6e-10 Score=100.20 Aligned_cols=55 Identities=24% Similarity=0.352 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEE-EeCCccEEEeCeEEEcCCcCh
Q 015072 153 TKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTV-VTSSGEEFWGKKCVVTAGAWV 213 (413)
Q Consensus 153 ~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v-~~~~g~~i~ad~vV~A~G~~~ 213 (413)
..+...+.+.+.+.|++++.++ |+++.. . +.+.+ .+.+++++.+|+||+|+|...
T Consensus 71 ~~~~~~l~~~~~~~~v~~~~~~-v~~i~~--~---~~~~v~~~~~g~~~~~d~lviAtG~~~ 126 (335)
T 2a87_A 71 PELMDEMREQALRFGADLRMED-VESVSL--H---GPLKSVVTADGQTHRARAVILAMGAAA 126 (335)
T ss_dssp HHHHHHHHHHHHHTTCEEECCC-EEEEEC--S---SSSEEEEETTSCEEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHHHHcCCEEEEee-EEEEEe--C---CcEEEEEeCCCCEEEeCEEEECCCCCc
Confidence 4566667777788899999876 888876 4 34566 677787899999999999854
No 130
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=99.05 E-value=9.8e-10 Score=98.63 Aligned_cols=59 Identities=17% Similarity=0.179 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHHHcCCeEecCceEEEEEeeeccC-CCcEEEEeCCccEEEeCeEEEcCCcCh
Q 015072 153 TKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDV-RGGVTVVTSSGEEFWGKKCVVTAGAWV 213 (413)
Q Consensus 153 ~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~-~~~~~v~~~~g~~i~ad~vV~A~G~~~ 213 (413)
..+...+.+.+.+.|++++.+++|+.+.. +.. ...+.+.+++|+++.+|+||+|+|.+.
T Consensus 56 ~~~~~~~~~~~~~~~v~~~~~~~v~~i~~--~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~ 115 (310)
T 1fl2_A 56 QKLAGALKVHVDEYDVDVIDSQSASKLIP--AAVEGGLHQIETASGAVLKARSIIVATGAKW 115 (310)
T ss_dssp HHHHHHHHHHHHTSCEEEECSCCEEEEEC--CSSTTCCEEEEETTSCEEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHHHHcCCeEEccCEEEEEEe--cccCCceEEEEECCCCEEEeCEEEECcCCCc
Confidence 45666677777788999999999999987 521 236788888887799999999999864
No 131
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=99.05 E-value=9.7e-10 Score=99.13 Aligned_cols=55 Identities=11% Similarity=0.080 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcCh
Q 015072 153 TKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWV 213 (413)
Q Consensus 153 ~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~ 213 (413)
..+...+.+.+.+.|++++.++ |+++.. + .+.+.+ +.+++++.+|+||+|+|...
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~-v~~i~~--~--~~~~~v-~~~~~~~~~~~lv~AtG~~~ 116 (320)
T 1trb_A 62 PLLMERMHEHATKFETEIIFDH-INKVDL--Q--NRPFRL-NGDNGEYTCDALIIATGASA 116 (320)
T ss_dssp HHHHHHHHHHHHHTTCEEECCC-EEEEEC--S--SSSEEE-EESSCEEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEee-eeEEEe--c--CCEEEE-EeCCCEEEcCEEEECCCCCc
Confidence 4566666777788899999876 888887 6 456666 55666799999999999753
No 132
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=99.05 E-value=4.1e-09 Score=99.89 Aligned_cols=58 Identities=19% Similarity=0.252 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcChh
Q 015072 153 TKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWVG 214 (413)
Q Consensus 153 ~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~~ 214 (413)
..+.+.+.+.+++.|++++++++|+++.. + ++.+.+++++|+++.+|.||+|+|...+
T Consensus 208 ~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~--~--~~~v~v~~~~g~~i~~D~vv~A~G~~p~ 265 (455)
T 2yqu_A 208 LEVSRAAERVFKKQGLTIRTGVRVTAVVP--E--AKGARVELEGGEVLEADRVLVAVGRRPY 265 (455)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEE--E--TTEEEEEETTSCEEEESEEEECSCEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEECCEEEEEEE--e--CCEEEEEECCCeEEEcCEEEECcCCCcC
Confidence 56777888888889999999999999988 6 3457777777878999999999998765
No 133
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=99.05 E-value=3.7e-09 Score=100.81 Aligned_cols=58 Identities=19% Similarity=0.094 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeC--Cc-cEEEeCeEEEcCCcCh
Q 015072 152 PTKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTS--SG-EEFWGKKCVVTAGAWV 213 (413)
Q Consensus 152 ~~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~--~g-~~i~ad~vV~A~G~~~ 213 (413)
+..+.+.+.+.+++.|++++++++|+++.. + ++.+.+... +| +++.+|.||+|+|...
T Consensus 220 ~~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~--~--~~~~~v~~~~~~g~~~~~~D~vi~a~G~~p 280 (476)
T 3lad_A 220 DEQVAKEAQKILTKQGLKILLGARVTGTEV--K--NKQVTVKFVDAEGEKSQAFDKLIVAVGRRP 280 (476)
T ss_dssp CHHHHHHHHHHHHHTTEEEEETCEEEEEEE--C--SSCEEEEEESSSEEEEEEESEEEECSCEEE
T ss_pred CHHHHHHHHHHHHhCCCEEEECCEEEEEEE--c--CCEEEEEEEeCCCcEEEECCEEEEeeCCcc
Confidence 356777888888999999999999999988 6 344555544 33 5799999999999754
No 134
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=99.04 E-value=2e-09 Score=102.19 Aligned_cols=58 Identities=14% Similarity=0.047 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeCCcc-EEEeCeEEEcCCcChh
Q 015072 153 TKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGE-EFWGKKCVVTAGAWVG 214 (413)
Q Consensus 153 ~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~-~i~ad~vV~A~G~~~~ 214 (413)
..+.+.+.+.+++.|++++++++|+++.. + ++.+.+++.+|+ ++.+|.||+|+|...+
T Consensus 207 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~--~--~~~~~v~~~~G~~~i~~D~vv~a~G~~p~ 265 (463)
T 2r9z_A 207 PLLSATLAENMHAQGIETHLEFAVAALER--D--AQGTTLVAQDGTRLEGFDSVIWAVGRAPN 265 (463)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEEE--E--TTEEEEEETTCCEEEEESEEEECSCEEES
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEE--e--CCeEEEEEeCCcEEEEcCEEEECCCCCcC
Confidence 46677788888899999999999999987 6 334778888888 8999999999998654
No 135
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=99.03 E-value=1.6e-10 Score=106.94 Aligned_cols=51 Identities=10% Similarity=-0.065 Sum_probs=41.7
Q ss_pred eecHHHHHHHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcChh
Q 015072 149 VIKPTKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWVG 214 (413)
Q Consensus 149 ~~~~~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~~ 214 (413)
.++...+.+.|.+.+.+.|++++++++|+++.. . . ++++|.||.|+|.++.
T Consensus 94 ~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~---~----------~~~ad~vV~AdG~~S~ 144 (381)
T 3c4a_A 94 GVERRGLVHALRDKCRSQGIAIRFESPLLEHGE--L---P----------LADYDLVVLANGVNHK 144 (381)
T ss_dssp EEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGG--C---C----------GGGCSEEEECCGGGGG
T ss_pred eecHHHHHHHHHHHHHHCCCEEEeCCEeccchh--c---c----------cccCCEEEECCCCCch
Confidence 456678899999999888999999999987754 2 1 1579999999999885
No 136
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=99.03 E-value=8.4e-10 Score=105.46 Aligned_cols=59 Identities=20% Similarity=0.141 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcChh
Q 015072 153 TKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWVG 214 (413)
Q Consensus 153 ~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~~ 214 (413)
..+.+.+.+.+++.|++++++++|+++.. +++ +.+.+++.+|+++.+|.||+|+|...+
T Consensus 231 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~--~~~-~~~~v~~~~G~~i~~D~vv~a~G~~p~ 289 (490)
T 1fec_A 231 SELRKQLTEQLRANGINVRTHENPAKVTK--NAD-GTRHVVFESGAEADYDVVMLAIGRVPR 289 (490)
T ss_dssp HHHHHHHHHHHHHTTEEEEETCCEEEEEE--CTT-SCEEEEETTSCEEEESEEEECSCEEES
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEE--cCC-CEEEEEECCCcEEEcCEEEEccCCCcC
Confidence 56778888889999999999999999988 622 347788888878999999999998765
No 137
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=99.02 E-value=9.6e-09 Score=97.96 Aligned_cols=60 Identities=15% Similarity=-0.070 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeCC-------ccEEEeCeEEEcCCcChh
Q 015072 153 TKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSS-------GEEFWGKKCVVTAGAWVG 214 (413)
Q Consensus 153 ~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~-------g~~i~ad~vV~A~G~~~~ 214 (413)
..+.+.+.+.+++.|++++.++.|+++.. .+++..+.+.+.+ |+++.+|.||+|+|...+
T Consensus 228 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~--~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p~ 294 (478)
T 3dk9_A 228 SMISTNCTEELENAGVEVLKFSQVKEVKK--TLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPN 294 (478)
T ss_dssp HHHHHHHHHHHHHTTCEEETTEEEEEEEE--CSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEES
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEE--cCCCcEEEEEEccCCCCcccceEEEcCEEEEeeccccC
Confidence 56777888888999999999999999987 6322135666654 256999999999997544
No 138
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=99.00 E-value=9.7e-09 Score=95.85 Aligned_cols=69 Identities=19% Similarity=0.217 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcChh-hhhhhhcCCCc
Q 015072 152 PTKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWVG-KLVKKISGLEL 225 (413)
Q Consensus 152 ~~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~~-~l~~~~~g~~~ 225 (413)
+..+.+.+.+.+++.|+++++++.|+++.. + +....|++++|+++.+|.||+|+|...+ .++..+ |+.+
T Consensus 184 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~--~--~~~~~v~~~dg~~i~aD~Vv~a~G~~p~~~l~~~~-gl~~ 253 (410)
T 3ef6_A 184 GRRIGAWLRGLLTELGVQVELGTGVVGFSG--E--GQLEQVMASDGRSFVADSALICVGAEPADQLARQA-GLAC 253 (410)
T ss_dssp CHHHHHHHHHHHHHHTCEEECSCCEEEEEC--S--SSCCEEEETTSCEEECSEEEECSCEEECCHHHHHT-TCCB
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCEEEEEec--c--CcEEEEEECCCCEEEcCEEEEeeCCeecHHHHHhC-CCcc
Confidence 356777888888899999999999999988 6 3455788888988999999999998765 466655 5433
No 139
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.00 E-value=2.8e-09 Score=102.50 Aligned_cols=59 Identities=14% Similarity=0.163 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHHcCCeEecCceEEEEEeeeccC-CCcEEEEeCCccEEEeCeEEEcCCcCh
Q 015072 153 TKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDV-RGGVTVVTSSGEEFWGKKCVVTAGAWV 213 (413)
Q Consensus 153 ~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~-~~~~~v~~~~g~~i~ad~vV~A~G~~~ 213 (413)
..+...+.+.+.+.|++++.+++|+++.. +.. ++.+.|.+.+|+++.+|+||+|+|.+.
T Consensus 267 ~~l~~~l~~~~~~~gv~v~~~~~v~~i~~--~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~ 326 (521)
T 1hyu_A 267 QKLAGALKAHVSDYDVDVIDSQSASKLVP--AATEGGLHQIETASGAVLKARSIIIATGAKW 326 (521)
T ss_dssp HHHHHHHHHHHHTSCEEEECSCCEEEEEC--CSSTTSCEEEEETTSCEEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEe--ccCCCceEEEEECCCCEEEcCEEEECCCCCc
Confidence 45666777778888999999999999986 421 236788888887899999999999854
No 140
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.00 E-value=4.7e-10 Score=106.69 Aligned_cols=57 Identities=14% Similarity=0.033 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHHHcCCeEecCceEEEEEeeeccC-CCc--EEEEeCCcc----EEEeCeEEEcCCc
Q 015072 153 TKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDV-RGG--VTVVTSSGE----EFWGKKCVVTAGA 211 (413)
Q Consensus 153 ~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~-~~~--~~v~~~~g~----~i~ad~vV~A~G~ 211 (413)
..+...+...+.+.+++++++++|++|.. +++ ++. +.|++.+++ ++.+|+||+|+|.
T Consensus 127 ~~~~~~l~~~~~~~~~~i~~~~~V~~i~~--~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlAtG~ 190 (463)
T 3s5w_A 127 MEFNDYLRWVASHFQEQSRYGEEVLRIEP--MLSAGQVEALRVISRNADGEELVRTTRALVVSPGG 190 (463)
T ss_dssp HHHHHHHHHHHTTCTTTEEESEEEEEEEE--EEETTEEEEEEEEEEETTSCEEEEEESEEEECCCC
T ss_pred HHHHHHHHHHHHHcCCeEEeCCEEEEEEE--ecCCCceEEEEEEEecCCCceEEEEeCEEEECCCC
Confidence 45666676777777899999999999988 521 122 466666654 7999999999997
No 141
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.99 E-value=2.6e-09 Score=101.59 Aligned_cols=58 Identities=12% Similarity=0.067 Sum_probs=45.1
Q ss_pred HHHHHHHHHHH-HHcCCeEecCceEEEEEeeeccCCCcEEEEeC--Cc--cEEEeCeEEEcCCcChh
Q 015072 153 TKAVSMFQTLA-IKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTS--SG--EEFWGKKCVVTAGAWVG 214 (413)
Q Consensus 153 ~~~~~~l~~~~-~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~--~g--~~i~ad~vV~A~G~~~~ 214 (413)
..+.+.+.+.+ ++.|++++++++|+++.. + ++.+.+.+. +| +++.+|.||+|+|...+
T Consensus 215 ~~~~~~l~~~l~~~~gv~i~~~~~v~~i~~--~--~~~~~v~~~~~~g~~~~i~~D~vv~a~G~~p~ 277 (468)
T 2qae_A 215 EDVTNALVGALAKNEKMKFMTSTKVVGGTN--N--GDSVSLEVEGKNGKRETVTCEALLVSVGRRPF 277 (468)
T ss_dssp HHHHHHHHHHHHHHTCCEEECSCEEEEEEE--C--SSSEEEEEECC---EEEEEESEEEECSCEEEC
T ss_pred HHHHHHHHHHHhhcCCcEEEeCCEEEEEEE--c--CCeEEEEEEcCCCceEEEECCEEEECCCcccC
Confidence 46677888888 899999999999999988 6 334555543 56 57999999999998754
No 142
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.99 E-value=6.3e-09 Score=101.88 Aligned_cols=62 Identities=13% Similarity=0.078 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcChh-hhhhhh
Q 015072 153 TKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWVG-KLVKKI 220 (413)
Q Consensus 153 ~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~~-~l~~~~ 220 (413)
..+.+.+.+.+++.|++++++++|+++.. + .+ .|.+.+|+++.+|.||+|+|...+ .++..+
T Consensus 228 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~--~--~~--~v~~~~g~~i~~D~Vi~a~G~~p~~~~l~~~ 290 (588)
T 3ics_A 228 YEMAAYVHEHMKNHDVELVFEDGVDALEE--N--GA--VVRLKSGSVIQTDMLILAIGVQPESSLAKGA 290 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEG--G--GT--EEEETTSCEEECSEEEECSCEEECCHHHHHT
T ss_pred HHHHHHHHHHHHHcCCEEEECCeEEEEec--C--CC--EEEECCCCEEEcCEEEEccCCCCChHHHHhc
Confidence 56778888889999999999999999987 5 23 355678888999999999998755 355544
No 143
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.99 E-value=9.7e-09 Score=98.06 Aligned_cols=60 Identities=17% Similarity=0.018 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeCCcc-----EEEeCeEEEcCCcChh
Q 015072 152 PTKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGE-----EFWGKKCVVTAGAWVG 214 (413)
Q Consensus 152 ~~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~-----~i~ad~vV~A~G~~~~ 214 (413)
+..+.+.+.+.+++.|++++++++|+++.. .++ +.+.+++.+++ ++.+|.||+|+|...+
T Consensus 226 d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~--~~~-~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~p~ 290 (483)
T 3dgh_A 226 DQQMAELVAASMEERGIPFLRKTVPLSVEK--QDD-GKLLVKYKNVETGEESEDVYDTVLWAIGRKGL 290 (483)
T ss_dssp CHHHHHHHHHHHHHTTCCEEETEEEEEEEE--CTT-SCEEEEEEETTTCCEEEEEESEEEECSCEEEC
T ss_pred CHHHHHHHHHHHHhCCCEEEeCCEEEEEEE--cCC-CcEEEEEecCCCCceeEEEcCEEEECcccccC
Confidence 356777888888999999999999999987 532 33455543332 6999999999997543
No 144
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.98 E-value=2e-09 Score=102.27 Aligned_cols=38 Identities=34% Similarity=0.490 Sum_probs=34.4
Q ss_pred CCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCC
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLH 43 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~~ 43 (413)
+++||+|||||++|+++|..|++.|++|+|||+.+..|
T Consensus 3 ~~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~G 40 (466)
T 3l8k_A 3 LKYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELG 40 (466)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSS
T ss_pred ccceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCC
Confidence 36999999999999999999999999999999766554
No 145
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.97 E-value=2.1e-09 Score=102.67 Aligned_cols=40 Identities=35% Similarity=0.605 Sum_probs=35.2
Q ss_pred CCCCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCC
Q 015072 4 SGENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLH 43 (413)
Q Consensus 4 ~~~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~~ 43 (413)
|+.++||+|||||++|+++|..|++.|++|+|||+.+..+
T Consensus 3 m~~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~G 42 (482)
T 1ojt_A 3 ADAEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLG 42 (482)
T ss_dssp SEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSS
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCC
Confidence 3446899999999999999999999999999999965543
No 146
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.97 E-value=5.8e-09 Score=99.75 Aligned_cols=59 Identities=15% Similarity=0.085 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcChh
Q 015072 153 TKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWVG 214 (413)
Q Consensus 153 ~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~~ 214 (413)
..+.+.+.+.+++.|++++++++|+++.. +++ +.+.+++.+|+++.+|.||+|+|...+
T Consensus 235 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~--~~~-~~~~v~~~~G~~i~~D~vv~a~G~~p~ 293 (495)
T 2wpf_A 235 ETIREEVTKQLTANGIEIMTNENPAKVSL--NTD-GSKHVTFESGKTLDVDVVMMAIGRIPR 293 (495)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEE--CTT-SCEEEEETTSCEEEESEEEECSCEEEC
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEE--cCC-ceEEEEECCCcEEEcCEEEECCCCccc
Confidence 46777888888999999999999999988 622 346788888888999999999998654
No 147
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.97 E-value=2.5e-09 Score=96.09 Aligned_cols=57 Identities=12% Similarity=0.164 Sum_probs=41.5
Q ss_pred cHHHHHHHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEE-EeCCccEEEeCeEEEcCCcC
Q 015072 151 KPTKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTV-VTSSGEEFWGKKCVVTAGAW 212 (413)
Q Consensus 151 ~~~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v-~~~~g~~i~ad~vV~A~G~~ 212 (413)
.+..+...+.+.+.+.|++++.+ +|+++ . ++..+.+.+ ...++ ++.+|+||+|+|..
T Consensus 60 ~~~~~~~~~~~~~~~~~v~~~~~-~v~~i-~--~~~~~~~~v~~~~~~-~~~~d~lvlAtG~~ 117 (315)
T 3r9u_A 60 DGISFMAPWSEQCMRFGLKHEMV-GVEQI-L--KNSDGSFTIKLEGGK-TELAKAVIVCTGSA 117 (315)
T ss_dssp CHHHHHHHHHHHHTTTCCEEECC-CEEEE-E--ECTTSCEEEEETTSC-EEEEEEEEECCCEE
T ss_pred CHHHHHHHHHHHHHHcCcEEEEE-EEEEE-e--cCCCCcEEEEEecCC-EEEeCEEEEeeCCC
Confidence 34567777778888889999977 89999 7 621156663 22333 69999999999973
No 148
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=98.95 E-value=1.1e-08 Score=97.31 Aligned_cols=44 Identities=41% Similarity=0.482 Sum_probs=38.3
Q ss_pred CCccEEEECCCHHHHHHHHHHHHcCC-cEEEEcccCCCCCCCCCC
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAKRGQ-KTLLLEQFDFLHHRGSSH 49 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~~g~-~V~lvE~~~~~~~~~~s~ 49 (413)
..+||+|||||++|+++|+.|+++|+ +|+|+|+.+..||+..+.
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~~~~ 47 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRMHKT 47 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTSCEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCceeec
Confidence 46899999999999999999999998 899999998887776554
No 149
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.95 E-value=4e-09 Score=100.64 Aligned_cols=39 Identities=31% Similarity=0.409 Sum_probs=34.7
Q ss_pred CCCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCC
Q 015072 5 GENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLH 43 (413)
Q Consensus 5 ~~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~~ 43 (413)
+.++||+|||||++|+++|..|+++|++|+|||+.+..+
T Consensus 3 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~G 41 (478)
T 1v59_A 3 NKSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLG 41 (478)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcC
Confidence 346899999999999999999999999999999965543
No 150
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=98.92 E-value=9.2e-09 Score=98.71 Aligned_cols=45 Identities=36% Similarity=0.443 Sum_probs=39.8
Q ss_pred CCCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCC
Q 015072 5 GENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSH 49 (413)
Q Consensus 5 ~~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~~~~~~s~ 49 (413)
...+||+|||||++|+++|+.|+++|++|+|+|+.+..||+..+.
T Consensus 31 ~~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~~~~ 75 (498)
T 2iid_A 31 SNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVRTY 75 (498)
T ss_dssp SSCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTCCEE
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCceeee
Confidence 346899999999999999999999999999999998887765543
No 151
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.92 E-value=7.1e-09 Score=103.22 Aligned_cols=39 Identities=38% Similarity=0.377 Sum_probs=35.5
Q ss_pred CCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCC
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHH 44 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~~~ 44 (413)
.++||+|||||++|+++|+.|+++|++|+|||+.+..++
T Consensus 390 ~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG 428 (690)
T 3k30_A 390 SDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGG 428 (690)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCT
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCC
Confidence 468999999999999999999999999999999876654
No 152
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.92 E-value=2.1e-08 Score=96.00 Aligned_cols=59 Identities=12% Similarity=0.071 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeCCccE-EEeCeEEEcCCcChh
Q 015072 153 TKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEE-FWGKKCVVTAGAWVG 214 (413)
Q Consensus 153 ~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~-i~ad~vV~A~G~~~~ 214 (413)
..+...+.+.+++.|++++++++|+++.. +++ +.+.+.+++|++ +.+|.||+|+|...+
T Consensus 217 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~--~~~-~~~~v~~~~g~~~~~~D~vi~a~G~~p~ 276 (500)
T 1onf_A 217 ESVINVLENDMKKNNINIVTFADVVEIKK--VSD-KNLSIHLSDGRIYEHFDHVIYCVGRSPD 276 (500)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEE--SST-TCEEEEETTSCEEEEESEEEECCCBCCT
T ss_pred hhhHHHHHHHHHhCCCEEEECCEEEEEEE--cCC-ceEEEEECCCcEEEECCEEEECCCCCcC
Confidence 46777888888999999999999999987 522 346777888887 999999999998765
No 153
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=98.92 E-value=7.3e-09 Score=100.06 Aligned_cols=37 Identities=32% Similarity=0.390 Sum_probs=34.0
Q ss_pred CCccEEEECCCHHHHHHHHHHHHc-CCcEEEEcccCCC
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAKR-GQKTLLLEQFDFL 42 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~~-g~~V~lvE~~~~~ 42 (413)
.++|++|||+|.+|+++|++|++. |.+|+|+|++...
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~ 49 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDD 49 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcC
Confidence 469999999999999999999998 8999999998654
No 154
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.91 E-value=1.5e-08 Score=96.91 Aligned_cols=57 Identities=11% Similarity=0.051 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeC--Cc--cEEEeCeEEEcCCcChh
Q 015072 153 TKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTS--SG--EEFWGKKCVVTAGAWVG 214 (413)
Q Consensus 153 ~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~--~g--~~i~ad~vV~A~G~~~~ 214 (413)
..+.+.+.+.+++. ++++++++|+++.. + ++.+.+... +| +++.+|.||+|+|...+
T Consensus 215 ~~~~~~l~~~l~~~-V~i~~~~~v~~i~~--~--~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~~p~ 275 (492)
T 3ic9_A 215 EEMKRYAEKTFNEE-FYFDAKARVISTIE--K--EDAVEVIYFDKSGQKTTESFQYVLAATGRKAN 275 (492)
T ss_dssp HHHHHHHHHHHHTT-SEEETTCEEEEEEE--C--SSSEEEEEECTTCCEEEEEESEEEECSCCEES
T ss_pred HHHHHHHHHHHhhC-cEEEECCEEEEEEE--c--CCEEEEEEEeCCCceEEEECCEEEEeeCCccC
Confidence 56777777777777 99999999999988 6 345556553 66 57999999999997544
No 155
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.90 E-value=8.7e-09 Score=98.16 Aligned_cols=60 Identities=22% Similarity=0.164 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEE-----eCCccEEEeCeEEEcCCcChh
Q 015072 152 PTKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVV-----TSSGEEFWGKKCVVTAGAWVG 214 (413)
Q Consensus 152 ~~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~-----~~~g~~i~ad~vV~A~G~~~~ 214 (413)
+..+.+.+.+.+++.|++++++++|+++.. +++ ..+.+. +.+++++.+|.||+|+|...+
T Consensus 219 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~--~~~-~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~p~ 283 (474)
T 1zmd_A 219 DMEISKNFQRILQKQGFKFKLNTKVTGATK--KSD-GKIDVSIEAASGGKAEVITCDVLLVCIGRRPF 283 (474)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSEEEEEEEE--CTT-SCEEEEEEETTSCCCEEEEESEEEECSCEEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEeCceEEEEEE--cCC-ceEEEEEEecCCCCceEEEcCEEEECcCCCcC
Confidence 456777888888999999999999999988 622 225555 345667999999999998654
No 156
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.90 E-value=1.7e-08 Score=97.05 Aligned_cols=35 Identities=31% Similarity=0.579 Sum_probs=32.9
Q ss_pred CCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
.++||+|||||++|+++|..|++.|++|+|||+.+
T Consensus 31 ~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~ 65 (519)
T 3qfa_A 31 YDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVT 65 (519)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccC
Confidence 46899999999999999999999999999999865
No 157
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.88 E-value=9.4e-09 Score=97.87 Aligned_cols=39 Identities=33% Similarity=0.409 Sum_probs=35.2
Q ss_pred CCCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCC
Q 015072 5 GENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLH 43 (413)
Q Consensus 5 ~~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~~ 43 (413)
+.++||+|||||++|+++|..|++.|++|+|||+.+..|
T Consensus 4 ~~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~G 42 (470)
T 1dxl_A 4 SDENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALG 42 (470)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSC
T ss_pred CccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcc
Confidence 346999999999999999999999999999999986554
No 158
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.88 E-value=3.5e-08 Score=96.24 Aligned_cols=66 Identities=17% Similarity=0.216 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHHHcCCeEecCceEEEEEeeecc-----------------CCCcEEEEeCCccEEEeCeEEEcCCcChh-
Q 015072 153 TKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDD-----------------VRGGVTVVTSSGEEFWGKKCVVTAGAWVG- 214 (413)
Q Consensus 153 ~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~-----------------~~~~~~v~~~~g~~i~ad~vV~A~G~~~~- 214 (413)
..+...+.+.+++.|+++++++.|+++.. +. .++.+.+...+|+++.+|.||+|+|...+
T Consensus 192 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~ 269 (565)
T 3ntd_A 192 REMAGFAHQAIRDQGVDLRLGTALSEVSY--QVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIMAIGVRPET 269 (565)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEE--ECCCCCCCGGGTCCCTTCCTTCEEEEEETTSCEEEESEEEECSCEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEeCCeEEEEec--cccccccccccccccccccCCCcEEEEEcCCCEEEcCEEEECcCCccch
Confidence 56777888888999999999999999976 31 12456677788888999999999998765
Q ss_pred hhhhhh
Q 015072 215 KLVKKI 220 (413)
Q Consensus 215 ~l~~~~ 220 (413)
.++..+
T Consensus 270 ~l~~~~ 275 (565)
T 3ntd_A 270 QLARDA 275 (565)
T ss_dssp HHHHHH
T ss_pred HHHHhC
Confidence 455544
No 159
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.87 E-value=1.2e-08 Score=95.28 Aligned_cols=59 Identities=12% Similarity=0.119 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcChhhhhhh
Q 015072 153 TKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWVGKLVKK 219 (413)
Q Consensus 153 ~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~~~l~~~ 219 (413)
..+.+.+.+.+++.|++++++++|++++. + + +.+++|+++.+|.||+|+|.....++..
T Consensus 218 ~~~~~~~~~~l~~~gV~~~~~~~v~~i~~--~---~---v~~~~g~~~~~D~vi~a~G~~~~~~l~~ 276 (409)
T 3h8l_A 218 PNSRKAVASIYNQLGIKLVHNFKIKEIRE--H---E---IVDEKGNTIPADITILLPPYTGNPALKN 276 (409)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEECS--S---E---EEETTSCEEECSEEEEECCEECCHHHHT
T ss_pred HHHHHHHHHHHHHCCCEEEcCCceEEECC--C---e---EEECCCCEEeeeEEEECCCCCccHHHHh
Confidence 56778888888999999999999999876 4 2 5667888899999999999877666554
No 160
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.87 E-value=1.4e-09 Score=96.18 Aligned_cols=42 Identities=31% Similarity=0.388 Sum_probs=37.8
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSS 48 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~~~~~~s 48 (413)
++||+|||||++|+++|+.|+++|++|+|+||.+..|++..+
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~~~~ 43 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSS 43 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccc
Confidence 389999999999999999999999999999999887765544
No 161
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.86 E-value=8.2e-09 Score=98.05 Aligned_cols=34 Identities=38% Similarity=0.494 Sum_probs=32.2
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
++||+|||||++|+++|..|+++|++|+|||+..
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~~ 36 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPKY 36 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 5899999999999999999999999999999973
No 162
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.86 E-value=2.2e-08 Score=95.63 Aligned_cols=36 Identities=28% Similarity=0.518 Sum_probs=33.0
Q ss_pred CCCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 5 GENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 5 ~~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
..++||+|||||++|+++|..|++.|++|+|||+.+
T Consensus 4 ~~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~ 39 (488)
T 3dgz_A 4 QQSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVE 39 (488)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecc
Confidence 346999999999999999999999999999999843
No 163
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.85 E-value=5.1e-09 Score=100.09 Aligned_cols=36 Identities=17% Similarity=0.231 Sum_probs=32.9
Q ss_pred CCccEEEECCCHHHHHHHHHHHHcC---CcEEEEcccCC
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAKRG---QKTLLLEQFDF 41 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~~g---~~V~lvE~~~~ 41 (413)
+++||+|||||++|+++|..|++.| .+|+|||+.+.
T Consensus 34 m~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~ 72 (490)
T 2bc0_A 34 WGSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSN 72 (490)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSC
T ss_pred cCCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCC
Confidence 3589999999999999999999988 99999999764
No 164
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.85 E-value=6e-09 Score=98.63 Aligned_cols=35 Identities=23% Similarity=0.417 Sum_probs=32.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHc--CCcEEEEcccCCC
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKR--GQKTLLLEQFDFL 42 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~--g~~V~lvE~~~~~ 42 (413)
+||+|||||++|+++|+.|+++ |.+|+|||+++..
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~ 39 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATV 39 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCC
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCC
Confidence 6899999999999999999998 8999999998754
No 165
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.84 E-value=1.3e-09 Score=104.11 Aligned_cols=61 Identities=15% Similarity=0.091 Sum_probs=47.8
Q ss_pred HHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcChh-hhhhhhcCCCcc
Q 015072 161 TLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWVG-KLVKKISGLELP 226 (413)
Q Consensus 161 ~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~~-~l~~~~~g~~~p 226 (413)
+.+++.|+++++++.|+++.. + +....+.+.+|+++.+|.||+|+|.+.+ .+++.+ |..+.
T Consensus 265 ~~l~~~GV~v~~~~~v~~i~~--~--~~v~~v~~~~g~~i~aD~Vv~a~G~~p~~~l~~~~-g~~~~ 326 (493)
T 1y56_A 265 QELERWGIDYVHIPNVKRVEG--N--EKVERVIDMNNHEYKVDALIFADGRRPDINPITQA-GGKLR 326 (493)
T ss_dssp HHHHHHTCEEEECSSEEEEEC--S--SSCCEEEETTCCEEECSEEEECCCEEECCHHHHHT-TCCEE
T ss_pred HHHHhCCcEEEeCCeeEEEec--C--CceEEEEeCCCeEEEeCEEEECCCcCcCchHHHhc-CCCcc
Confidence 566778999999999999987 6 3444566788888999999999999866 476665 65443
No 166
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.84 E-value=1e-08 Score=94.70 Aligned_cols=39 Identities=21% Similarity=0.339 Sum_probs=33.4
Q ss_pred CCCCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCC
Q 015072 4 SGENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFL 42 (413)
Q Consensus 4 ~~~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~ 42 (413)
..++.+|+|||||++|+++|..|...+.+|+|||+.+..
T Consensus 6 ~~~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~ 44 (385)
T 3klj_A 6 HHKSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYL 44 (385)
T ss_dssp --CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSC
T ss_pred ccCCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCC
Confidence 345789999999999999999997778999999997653
No 167
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.83 E-value=1.4e-08 Score=96.14 Aligned_cols=34 Identities=38% Similarity=0.473 Sum_probs=32.2
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
++||+|||||++|+++|..|++.|++|+|||+..
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~ 36 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKGN 36 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCC
Confidence 5899999999999999999999999999999973
No 168
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=98.81 E-value=4.7e-09 Score=101.48 Aligned_cols=37 Identities=32% Similarity=0.483 Sum_probs=33.8
Q ss_pred CCCccEEEECCCHHHHHHHHHHHHcC-CcEEEEcccCC
Q 015072 5 GENFDVIVVGAGIMGSSAAYQLAKRG-QKTLLLEQFDF 41 (413)
Q Consensus 5 ~~~~dvvIIGgG~aG~~~A~~L~~~g-~~V~lvE~~~~ 41 (413)
..+||+||||||.+|+.+|.+|++.| .+|+|||++..
T Consensus 4 ~~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 4 GSHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp TCEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CCcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 35699999999999999999999987 69999999865
No 169
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.81 E-value=1.5e-08 Score=95.86 Aligned_cols=36 Identities=22% Similarity=0.379 Sum_probs=32.6
Q ss_pred CccEEEECCCHHHHHHHHHHHHc--CCcEEEEcccCCC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKR--GQKTLLLEQFDFL 42 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~--g~~V~lvE~~~~~ 42 (413)
++||+|||||++|+++|+.|++. |++|+|||+.+..
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~ 40 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWV 40 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCC
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCcc
Confidence 47999999999999999999998 7899999997643
No 170
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.80 E-value=8.4e-09 Score=96.89 Aligned_cols=46 Identities=22% Similarity=0.259 Sum_probs=36.8
Q ss_pred HHHHcCCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcCh
Q 015072 162 LAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWV 213 (413)
Q Consensus 162 ~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~ 213 (413)
.+.+.|++++.+++|+.+.. + +. .|.+.+|+++.+|++|+|+|...
T Consensus 69 ~~~~~gv~~~~~~~v~~i~~--~--~~--~v~~~~g~~~~~d~lviAtG~~p 114 (431)
T 1q1r_A 69 AYAAQNIQLLGGTQVTAINR--D--RQ--QVILSDGRALDYDRLVLATGGRP 114 (431)
T ss_dssp HHHHTTEEEECSCCEEEEET--T--TT--EEEETTSCEEECSEEEECCCEEE
T ss_pred HHHhCCCEEEeCCEEEEEEC--C--CC--EEEECCCCEEECCEEEEcCCCCc
Confidence 34567999999999999988 5 23 46667787899999999999854
No 171
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.80 E-value=7.9e-08 Score=91.59 Aligned_cols=63 Identities=16% Similarity=0.132 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcChh-hhhhh
Q 015072 152 PTKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWVG-KLVKK 219 (413)
Q Consensus 152 ~~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~~-~l~~~ 219 (413)
+..+.+.+.+.+++.|++++++++|+++.. + +....+.++++ ++.+|.||+|+|...+ .+++.
T Consensus 226 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~--~--~~v~~v~~~~~-~i~~D~vi~a~G~~p~~~~l~~ 289 (480)
T 3cgb_A 226 DGDMAEYIYKEADKHHIEILTNENVKAFKG--N--ERVEAVETDKG-TYKADLVLVSVGVKPNTDFLEG 289 (480)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEE--S--SBEEEEEETTE-EEECSEEEECSCEEESCGGGTT
T ss_pred CHHHHHHHHHHHHHcCcEEEcCCEEEEEEc--C--CcEEEEEECCC-EEEcCEEEECcCCCcChHHHHh
Confidence 356778888889999999999999999987 5 23334556544 5999999999998754 34443
No 172
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.77 E-value=3.8e-08 Score=93.39 Aligned_cols=35 Identities=37% Similarity=0.522 Sum_probs=33.1
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDF 41 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~ 41 (413)
++||+|||||++|+++|..|++.|++|+|||+.+.
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~~ 40 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGEV 40 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCT
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 69999999999999999999999999999999863
No 173
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=98.77 E-value=9.4e-08 Score=92.63 Aligned_cols=37 Identities=43% Similarity=0.540 Sum_probs=33.8
Q ss_pred CCCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCC
Q 015072 5 GENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDF 41 (413)
Q Consensus 5 ~~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~ 41 (413)
..++|++|||+|.+|+++|++|++.|++|+|+|++..
T Consensus 5 ~~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~ 41 (546)
T 1kdg_A 5 ATPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGP 41 (546)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CCceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 3469999999999999999999999999999999864
No 174
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.76 E-value=1.2e-08 Score=96.01 Aligned_cols=34 Identities=32% Similarity=0.602 Sum_probs=31.6
Q ss_pred CccEEEECCCHHHHHHHHHHHH---cCCcEEEEcccC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAK---RGQKTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~---~g~~V~lvE~~~ 40 (413)
..||+|||||++|+++|+.|++ .|++|+|||+.+
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~ 40 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISAND 40 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSS
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCC
Confidence 3689999999999999999999 799999999875
No 175
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=98.75 E-value=1.9e-08 Score=96.99 Aligned_cols=36 Identities=36% Similarity=0.418 Sum_probs=33.0
Q ss_pred CccEEEECCCHHHHHHHHHHHH-cCCcEEEEcccCCC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAK-RGQKTLLLEQFDFL 42 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~-~g~~V~lvE~~~~~ 42 (413)
+||+||||||.+|+.+|.+|++ .+.+|+|||++...
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 5899999999999999999999 68999999998644
No 176
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.74 E-value=9.6e-09 Score=95.42 Aligned_cols=51 Identities=29% Similarity=0.466 Sum_probs=42.6
Q ss_pred CCCCCCCccEEEECCCHHHHHHHHHHHHc-CCcEEEEcccCCCCCCCCCCCC
Q 015072 1 MEFSGENFDVIVVGAGIMGSSAAYQLAKR-GQKTLLLEQFDFLHHRGSSHGE 51 (413)
Q Consensus 1 M~~~~~~~dvvIIGgG~aG~~~A~~L~~~-g~~V~lvE~~~~~~~~~~s~~~ 51 (413)
|..|+.++||+|||||++|+++|++|+++ |++|+|+|+++..||...+...
T Consensus 1 m~~m~~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~~~~~ 52 (399)
T 1v0j_A 1 MQPMTARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYSEAE 52 (399)
T ss_dssp ---CCCSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGCEEEC
T ss_pred CCcccccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeeccc
Confidence 55566679999999999999999999999 9999999999988877766543
No 177
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=98.73 E-value=2.9e-08 Score=95.90 Aligned_cols=36 Identities=33% Similarity=0.505 Sum_probs=32.5
Q ss_pred CCccEEEECCCHHHHHHHHHHHH-cCCcEEEEcccCC
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAK-RGQKTLLLEQFDF 41 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~-~g~~V~lvE~~~~ 41 (413)
.+||+||||+|.+|+.+|.+|++ .|++|+|||++..
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEE 52 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBC
T ss_pred CCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCC
Confidence 47999999999999999999998 5789999999864
No 178
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.72 E-value=1.6e-08 Score=94.37 Aligned_cols=41 Identities=22% Similarity=0.219 Sum_probs=32.9
Q ss_pred CCCCCCCccEEEECCCHHHHHHHHHHHHcCC--cEEEEcccCC
Q 015072 1 MEFSGENFDVIVVGAGIMGSSAAYQLAKRGQ--KTLLLEQFDF 41 (413)
Q Consensus 1 M~~~~~~~dvvIIGgG~aG~~~A~~L~~~g~--~V~lvE~~~~ 41 (413)
|..+.+++||+|||||++|+++|..|++.|. +|+|||+.+.
T Consensus 1 M~~~~~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~ 43 (408)
T 2gqw_A 1 MSQEALKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAE 43 (408)
T ss_dssp -----CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCS
T ss_pred CCCCCCCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCC
Confidence 5544567899999999999999999999998 5999999754
No 179
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.70 E-value=3.9e-08 Score=92.92 Aligned_cols=35 Identities=29% Similarity=0.359 Sum_probs=31.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHc--CCcEEEEcccCCC
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKR--GQKTLLLEQFDFL 42 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~--g~~V~lvE~~~~~ 42 (413)
+||+|||||++|+++|..|++. |++|+|||+.+..
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~ 37 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFI 37 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCcc
Confidence 4799999999999999999998 9999999997653
No 180
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=98.70 E-value=6.4e-08 Score=93.26 Aligned_cols=36 Identities=31% Similarity=0.490 Sum_probs=33.1
Q ss_pred CCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCC
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFL 42 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~ 42 (413)
.+||+||||+|.+|+.+|.+|++ |.+|+|+|++...
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~~ 60 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSLP 60 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBCG
T ss_pred CcccEEEECccHHHHHHHHHHhc-CCcEEEEecCCCc
Confidence 45899999999999999999999 9999999998653
No 181
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.69 E-value=1.6e-07 Score=88.20 Aligned_cols=61 Identities=16% Similarity=0.083 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeCCc--cEEEeCeEEEcCCcChhhhhhhh
Q 015072 154 KAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSG--EEFWGKKCVVTAGAWVGKLVKKI 220 (413)
Q Consensus 154 ~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g--~~i~ad~vV~A~G~~~~~l~~~~ 220 (413)
...+.+.+.++++|+++++++.|++++. + .+.+...+| +++.+|.||+|+|...+.++...
T Consensus 201 ~~~~~l~~~l~~~GV~~~~~~~v~~v~~--~----~~~~~~~~g~~~~i~~d~vi~~~G~~~~~~~~~~ 263 (430)
T 3hyw_A 201 ASKRLVEDLFAERNIDWIANVAVKAIEP--D----KVIYEDLNGNTHEVPAKFTMFMPSFQGPEVVASA 263 (430)
T ss_dssp THHHHHHHHHHHTTCEEECSCEEEEECS--S----EEEEECTTSCEEEEECSEEEEECEEECCHHHHTT
T ss_pred HHHHHHHHHHHhCCeEEEeCceEEEEeC--C----ceEEEeeCCCceEeecceEEEeccCCCchHHHhc
Confidence 3445666778889999999999999866 3 445555444 47999999999998766665544
No 182
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.69 E-value=4.7e-08 Score=92.51 Aligned_cols=34 Identities=29% Similarity=0.237 Sum_probs=31.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHc--CCcEEEEcccCC
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKR--GQKTLLLEQFDF 41 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~--g~~V~lvE~~~~ 41 (413)
+||+|||||++|+++|..|++. |++|+|||+.+.
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~ 36 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDN 36 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCC
Confidence 5899999999999999999998 999999999764
No 183
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.67 E-value=4.2e-07 Score=86.05 Aligned_cols=35 Identities=26% Similarity=0.344 Sum_probs=32.5
Q ss_pred CCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
.++||+|||||++|+++|..|++.|++|+|||++.
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~ 38 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQA 38 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEccCC
Confidence 46899999999999999999999999999999954
No 184
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.66 E-value=6.9e-09 Score=95.23 Aligned_cols=34 Identities=24% Similarity=0.299 Sum_probs=31.1
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDF 41 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~ 41 (413)
-.|++|||||++|+++|..|++.| +|+|||+++.
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~ 41 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPV 41 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSS
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCC
Confidence 469999999999999999999999 9999999764
No 185
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=98.61 E-value=2.1e-07 Score=90.58 Aligned_cols=37 Identities=27% Similarity=0.476 Sum_probs=33.8
Q ss_pred CCccEEEECCCHHHHHHHHHHHH-cCCcEEEEcccCCC
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAK-RGQKTLLLEQFDFL 42 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~-~g~~V~lvE~~~~~ 42 (413)
.++|++|||+|.+|+++|.+|++ .|.+|+|||++...
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 46999999999999999999999 79999999998643
No 186
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.60 E-value=2.7e-08 Score=93.52 Aligned_cols=34 Identities=29% Similarity=0.520 Sum_probs=31.7
Q ss_pred ccEEEECCCHHHHHHHHHHHH--cCCcEEEEcccCC
Q 015072 8 FDVIVVGAGIMGSSAAYQLAK--RGQKTLLLEQFDF 41 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~--~g~~V~lvE~~~~ 41 (413)
+||+|||||++|+++|+.|++ .|++|+|||+++.
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~ 38 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPY 38 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSE
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCC
Confidence 689999999999999999999 7899999999754
No 187
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.60 E-value=2.1e-08 Score=93.41 Aligned_cols=56 Identities=20% Similarity=0.123 Sum_probs=44.9
Q ss_pred HHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcChhhhhhhh
Q 015072 161 TLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWVGKLVKKI 220 (413)
Q Consensus 161 ~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~~~l~~~~ 220 (413)
+.+++.|++++.++++..++. + .....+.+++|+++.+|.||+|+|...+.++...
T Consensus 210 ~~l~~~gi~v~~~~~v~~v~~--~--~~~~~v~~~~g~~i~~D~vi~~~g~~~~~~~~~~ 265 (401)
T 3vrd_B 210 FGTENALIEWHPGPDAAVVKT--D--TEAMTVETSFGETFKAAVINLIPPQRAGKIAQSA 265 (401)
T ss_dssp TTSTTCSEEEECTTTTCEEEE--E--TTTTEEEETTSCEEECSEEEECCCEEECHHHHHT
T ss_pred HHHHhcCcEEEeCceEEEEEe--c--ccceEEEcCCCcEEEeeEEEEecCcCCchhHhhc
Confidence 334567899999999999887 6 4456788899999999999999998766666654
No 188
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=98.58 E-value=2.3e-06 Score=84.94 Aligned_cols=39 Identities=28% Similarity=0.392 Sum_probs=35.2
Q ss_pred CCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCC
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHH 44 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~~~ 44 (413)
..+||+|||||++|+++|..|+++|++|+|||+.+..++
T Consensus 372 ~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg 410 (671)
T 1ps9_A 372 QKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGG 410 (671)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCT
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCC
Confidence 358999999999999999999999999999999876643
No 189
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.58 E-value=2e-07 Score=87.62 Aligned_cols=54 Identities=13% Similarity=0.033 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcChh
Q 015072 153 TKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWVG 214 (413)
Q Consensus 153 ~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~~ 214 (413)
..+.+.+.+.+++.|++++++++|++++. . .+.+++|+++.+|.||+|+|...+
T Consensus 188 ~~~~~~~~~~l~~~gV~i~~~~~v~~~~~--~------~v~~~~g~~~~~D~vl~a~G~~Pn 241 (437)
T 4eqs_A 188 ADMNQPILDELDKREIPYRLNEEINAING--N------EITFKSGKVEHYDMIIEGVGTHPN 241 (437)
T ss_dssp GGGGHHHHHHHHHTTCCEEESCCEEEEET--T------EEEETTSCEEECSEEEECCCEEES
T ss_pred chhHHHHHHHhhccceEEEeccEEEEecC--C------eeeecCCeEEeeeeEEEEeceecC
Confidence 45566777888899999999999988766 3 356688888999999999997543
No 190
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=98.58 E-value=1.2e-07 Score=90.79 Aligned_cols=36 Identities=28% Similarity=0.440 Sum_probs=33.7
Q ss_pred CCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCC
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDF 41 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~ 41 (413)
.++|++|||+|.+|+++|++|++.|++|+|||++..
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~ 39 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQL 39 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCC
Confidence 469999999999999999999999999999999864
No 191
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.55 E-value=3.9e-07 Score=87.00 Aligned_cols=65 Identities=12% Similarity=0.026 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeCCcc----EEEeCeEEEcCCcChhhhhhhh
Q 015072 152 PTKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGE----EFWGKKCVVTAGAWVGKLVKKI 220 (413)
Q Consensus 152 ~~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~----~i~ad~vV~A~G~~~~~l~~~~ 220 (413)
+..+.+.+.+.+++.||+++++++|++++. + .........+|+ ++.+|.||+|+|...+++..++
T Consensus 271 ~~~~~~~~~~~L~~~GV~v~~~~~v~~v~~--~--~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~~~~~~~~l 339 (502)
T 4g6h_A 271 EKKLSSYAQSHLENTSIKVHLRTAVAKVEE--K--QLLAKTKHEDGKITEETIPYGTLIWATGNKARPVITDL 339 (502)
T ss_dssp CHHHHHHHHHHHHHTTCEEETTEEEEEECS--S--EEEEEEECTTSCEEEEEEECSEEEECCCEECCHHHHHH
T ss_pred CHHHHHHHHHHHHhcceeeecCceEEEEeC--C--ceEEEEEecCcccceeeeccCEEEEccCCcCCHHHHhH
Confidence 367788888999999999999999999977 4 233344455653 6999999999997665554443
No 192
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.54 E-value=9.1e-07 Score=83.85 Aligned_cols=54 Identities=24% Similarity=0.296 Sum_probs=41.5
Q ss_pred HHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeC-C--cc--EEEeCeEEEcCCcChh
Q 015072 157 SMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTS-S--GE--EFWGKKCVVTAGAWVG 214 (413)
Q Consensus 157 ~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~-~--g~--~i~ad~vV~A~G~~~~ 214 (413)
+.+.+.+++.|++++++++|+++.. + ++.+.+.+. + |+ ++.+|.||+|+|...+
T Consensus 214 ~~l~~~l~~~gV~i~~~~~v~~i~~--~--~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~~p~ 272 (464)
T 2eq6_A 214 ALLRRALEKEGIRVRTKTKAVGYEK--K--KDGLHVRLEPAEGGEGEEVVVDKVLVAVGRKPR 272 (464)
T ss_dssp HHHHHHHHHTTCEEECSEEEEEEEE--E--TTEEEEEEEETTCCSCEEEEESEEEECSCEEES
T ss_pred HHHHHHHHhcCCEEEcCCEEEEEEE--e--CCEEEEEEeecCCCceeEEEcCEEEECCCcccC
Confidence 3445666778999999999999988 6 344556554 5 65 7999999999997654
No 193
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.54 E-value=1.1e-07 Score=87.45 Aligned_cols=44 Identities=32% Similarity=0.534 Sum_probs=39.4
Q ss_pred CCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCC
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSH 49 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~~~~~~s~ 49 (413)
..+||+|||||++|+++|++|+++|++|+|+|+.+..||...+.
T Consensus 28 ~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~ 71 (397)
T 3hdq_A 28 KGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAYDC 71 (397)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGCCE
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCcccee
Confidence 46899999999999999999999999999999998887766554
No 194
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=98.53 E-value=2.5e-07 Score=88.61 Aligned_cols=37 Identities=30% Similarity=0.460 Sum_probs=34.0
Q ss_pred CCCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCC
Q 015072 5 GENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDF 41 (413)
Q Consensus 5 ~~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~ 41 (413)
..++|++|||+|.+|+.+|++|++.|.+|+|||++..
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~ 45 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRS 45 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 4569999999999999999999999999999998853
No 195
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.50 E-value=7.6e-07 Score=87.27 Aligned_cols=34 Identities=38% Similarity=0.574 Sum_probs=32.0
Q ss_pred CCccEEEECCCHHHHHHHHHHHHcCCcEEEEccc
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~ 39 (413)
..+||+|||||++|+++|..|+++|++|+|||+.
T Consensus 106 ~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 106 YDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred ccccEEEECCCccHHHHHHHHHhCCCeEEEEecc
Confidence 4689999999999999999999999999999974
No 196
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.50 E-value=1.8e-06 Score=80.99 Aligned_cols=65 Identities=18% Similarity=0.267 Sum_probs=47.5
Q ss_pred HHHHHHHHHcCCeEecCceEEEEEeeec-cCCCcEEEEeCCccEEEeCeEEEcCCcChh-hhhhhhcCCC
Q 015072 157 SMFQTLAIKNGAVLRDNTEVKTVLKVKD-DVRGGVTVVTSSGEEFWGKKCVVTAGAWVG-KLVKKISGLE 224 (413)
Q Consensus 157 ~~l~~~~~~~gv~i~~~~~V~~i~~~~~-~~~~~~~v~~~~g~~i~ad~vV~A~G~~~~-~l~~~~~g~~ 224 (413)
+.+.+.+++.|++++++++|+++.. . +++....+.+.+|+++.+|.||+|+|...+ .+++.+ |+.
T Consensus 195 ~~l~~~l~~~GV~i~~~~~v~~i~~--~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~~p~~~l~~~~-gl~ 261 (431)
T 1q1r_A 195 AFYEHLHREAGVDIRTGTQVCGFEM--STDQQKVTAVLCEDGTRLPADLVIAGIGLIPNCELASAA-GLQ 261 (431)
T ss_dssp HHHHHHHHHHTCEEECSCCEEEEEE--CTTTCCEEEEEETTSCEEECSEEEECCCEEECCHHHHHT-TCC
T ss_pred HHHHHHHHhCCeEEEeCCEEEEEEe--ccCCCcEEEEEeCCCCEEEcCEEEECCCCCcCcchhhcc-CCC
Confidence 3445666778999999999999975 3 212334677888888999999999998754 566654 543
No 197
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.49 E-value=1.3e-07 Score=86.25 Aligned_cols=46 Identities=28% Similarity=0.393 Sum_probs=40.1
Q ss_pred CCCccEEEECCCHHHHHHHHHHHHcCCcEEEEccc-CCCCCCCCCCC
Q 015072 5 GENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQF-DFLHHRGSSHG 50 (413)
Q Consensus 5 ~~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~-~~~~~~~~s~~ 50 (413)
...+||+|||||++|+++|+.|+++|++|+|+|+. +..||+..+..
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~~t~~ 88 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIKTFH 88 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCCEEC
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCceeeec
Confidence 45689999999999999999999999999999999 87777665543
No 198
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=98.48 E-value=1.7e-06 Score=86.64 Aligned_cols=39 Identities=31% Similarity=0.364 Sum_probs=35.5
Q ss_pred CCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCC
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHH 44 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~~~ 44 (413)
..+||+|||||++|+++|+.|+++|++|+|||+.+..++
T Consensus 388 ~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG 426 (729)
T 1o94_A 388 NKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGG 426 (729)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTT
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCC
Confidence 457999999999999999999999999999999877654
No 199
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.48 E-value=1.2e-07 Score=85.55 Aligned_cols=41 Identities=39% Similarity=0.385 Sum_probs=35.7
Q ss_pred CCccEEEECCCHHHHHHHHHHHH--cCCcEEEEcccCCCCCCC
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAK--RGQKTLLLEQFDFLHHRG 46 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~--~g~~V~lvE~~~~~~~~~ 46 (413)
.++||+|||||++|+++|++|++ .|++|+|||+.+..|+..
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~ 106 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGS 106 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTT
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceE
Confidence 35899999999999999999986 499999999988776543
No 200
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=98.46 E-value=5.4e-07 Score=92.79 Aligned_cols=37 Identities=35% Similarity=0.505 Sum_probs=34.3
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLH 43 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~~ 43 (413)
.+||+|||||++|+++|..|+++|++|+|||+++..+
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~G 164 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAG 164 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 5799999999999999999999999999999987654
No 201
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.43 E-value=1.9e-06 Score=82.10 Aligned_cols=35 Identities=20% Similarity=0.318 Sum_probs=32.1
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDF 41 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~ 41 (413)
..+++|||||..|+-+|..|++.|.+|+|+|+.+.
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 217 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQ 217 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCc
Confidence 35799999999999999999999999999998754
No 202
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.43 E-value=2.1e-06 Score=81.24 Aligned_cols=54 Identities=20% Similarity=0.198 Sum_probs=40.5
Q ss_pred HHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeC---CccEEEeCeEEEcCCcChh
Q 015072 157 SMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTS---SGEEFWGKKCVVTAGAWVG 214 (413)
Q Consensus 157 ~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~---~g~~i~ad~vV~A~G~~~~ 214 (413)
+.+.+.+++.|++++++++|+++.. + ++.+.+.+. +++++.+|.||+|+|...+
T Consensus 215 ~~l~~~l~~~gv~i~~~~~v~~i~~--~--~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~ 271 (455)
T 1ebd_A 215 AIIKKRLKKKGVEVVTNALAKGAEE--R--EDGVTVTYEANGETKTIDADYVLVTVGRRPN 271 (455)
T ss_dssp HHHHHHHHHTTCEEEESEEEEEEEE--E--TTEEEEEEEETTEEEEEEESEEEECSCEEES
T ss_pred HHHHHHHHHCCCEEEeCCEEEEEEE--e--CCeEEEEEEeCCceeEEEcCEEEECcCCCcc
Confidence 3445566778999999999999987 6 334555543 4557999999999997654
No 203
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=98.43 E-value=1.7e-07 Score=85.89 Aligned_cols=46 Identities=26% Similarity=0.488 Sum_probs=39.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCCCCc
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESR 53 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~~~~~~s~~~~~ 53 (413)
+||+|||||++|+++|++|+++|++|+|+|+++..||...+....+
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g 47 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNAYTEDCEG 47 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGGCEEEETT
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcceEeeccCC
Confidence 7999999999999999999999999999999988877666544333
No 204
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.42 E-value=2.3e-06 Score=80.75 Aligned_cols=54 Identities=17% Similarity=0.127 Sum_probs=40.5
Q ss_pred HHHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcChh
Q 015072 156 VSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWVG 214 (413)
Q Consensus 156 ~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~~ 214 (413)
.+.+.+.+++.|++++++++|+++.. + +....+.+ +++++.+|.||+|+|...+
T Consensus 194 ~~~l~~~l~~~gv~i~~~~~v~~i~~--~--~~v~~v~~-~~~~i~~d~vi~a~G~~p~ 247 (447)
T 1nhp_A 194 TDVLTEEMEANNITIATGETVERYEG--D--GRVQKVVT-DKNAYDADLVVVAVGVRPN 247 (447)
T ss_dssp HHHHHHHHHTTTEEEEESCCEEEEEC--S--SBCCEEEE-SSCEEECSEEEECSCEEES
T ss_pred HHHHHHHHHhCCCEEEcCCEEEEEEc--c--CcEEEEEE-CCCEEECCEEEECcCCCCC
Confidence 34455667778999999999999987 6 23334555 4456999999999997654
No 205
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.41 E-value=3.1e-06 Score=78.74 Aligned_cols=59 Identities=20% Similarity=0.273 Sum_probs=45.0
Q ss_pred HHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcChh-hhhhhhcCCC
Q 015072 157 SMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWVG-KLVKKISGLE 224 (413)
Q Consensus 157 ~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~~-~l~~~~~g~~ 224 (413)
+.+.+.+++.|++++++++|+++.. + .|++.+|+++.+|.||+|+|...+ .+++.. |+.
T Consensus 191 ~~l~~~l~~~GV~i~~~~~v~~i~~-----~---~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~-gl~ 250 (408)
T 2gqw_A 191 DFVARYHAAQGVDLRFERSVTGSVD-----G---VVLLDDGTRIAADMVVVGIGVLANDALARAA-GLA 250 (408)
T ss_dssp HHHHHHHHHTTCEEEESCCEEEEET-----T---EEEETTSCEEECSEEEECSCEEECCHHHHHH-TCC
T ss_pred HHHHHHHHHcCcEEEeCCEEEEEEC-----C---EEEECCCCEEEcCEEEECcCCCccHHHHHhC-CCC
Confidence 3455667788999999999998863 2 466678888999999999998754 566655 543
No 206
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.37 E-value=1.9e-06 Score=82.08 Aligned_cols=53 Identities=21% Similarity=0.081 Sum_probs=40.8
Q ss_pred HHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeCC----ccEEEeCeEEEcCCcChh
Q 015072 158 MFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSS----GEEFWGKKCVVTAGAWVG 214 (413)
Q Consensus 158 ~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~----g~~i~ad~vV~A~G~~~~ 214 (413)
.+.+.+++.|++++++++|+++.. + ++.+.+++.+ |+++.+|.||+|+|...+
T Consensus 231 ~l~~~l~~~gV~i~~~~~v~~i~~--~--~~~~~v~~~~~~~~g~~~~~D~vv~a~G~~p~ 287 (482)
T 1ojt_A 231 VWQKQNEYRFDNIMVNTKTVAVEP--K--EDGVYVTFEGANAPKEPQRYDAVLVAAGRAPN 287 (482)
T ss_dssp HHHHHHGGGEEEEECSCEEEEEEE--E--TTEEEEEEESSSCCSSCEEESCEEECCCEEEC
T ss_pred HHHHHHHhcCCEEEECCEEEEEEE--c--CCeEEEEEeccCCCceEEEcCEEEECcCCCcC
Confidence 345566778999999999999988 6 3445565554 667999999999998654
No 207
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=98.37 E-value=3.1e-07 Score=88.23 Aligned_cols=48 Identities=27% Similarity=0.314 Sum_probs=41.1
Q ss_pred CCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCCCCCc
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESR 53 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~~~~~~s~~~~~ 53 (413)
+.+||+|||||++|+++|+.|+++|++|+|+|+.+..||+..+....+
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g 59 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVSQDG 59 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCEEEETT
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceeeeccCC
Confidence 458999999999999999999999999999999999887766544333
No 208
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=98.36 E-value=3.9e-07 Score=84.05 Aligned_cols=43 Identities=26% Similarity=0.478 Sum_probs=38.6
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSH 49 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~~~~~~s~ 49 (413)
++||+|||||++|+++|+.|+++|++|+|+|+++..||...+.
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~ 45 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNSYDA 45 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGGCEE
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCccccc
Confidence 4799999999999999999999999999999998887766553
No 209
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.36 E-value=5.1e-06 Score=78.77 Aligned_cols=53 Identities=21% Similarity=0.245 Sum_probs=40.2
Q ss_pred HHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeC-Cc--cEEEeCeEEEcCCcChh
Q 015072 158 MFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTS-SG--EEFWGKKCVVTAGAWVG 214 (413)
Q Consensus 158 ~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~-~g--~~i~ad~vV~A~G~~~~ 214 (413)
.+.+.+++.|++++++++|+++.. + ++.+.+... +| +++.+|.||+|+|...+
T Consensus 217 ~l~~~l~~~gv~i~~~~~v~~i~~--~--~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~ 272 (464)
T 2a8x_A 217 EIEKQFKKLGVTILTATKVESIAD--G--GSQVTVTVTKDGVAQELKAEKVLQAIGFAPN 272 (464)
T ss_dssp HHHHHHHHHTCEEECSCEEEEEEE--C--SSCEEEEEESSSCEEEEEESEEEECSCEEEC
T ss_pred HHHHHHHHcCCEEEeCcEEEEEEE--c--CCeEEEEEEcCCceEEEEcCEEEECCCCCcc
Confidence 344566778999999999999988 6 334555543 55 57999999999997654
No 210
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.36 E-value=4.7e-06 Score=79.51 Aligned_cols=60 Identities=17% Similarity=0.133 Sum_probs=47.1
Q ss_pred HHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcChh-hhhhhh
Q 015072 157 SMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWVG-KLVKKI 220 (413)
Q Consensus 157 ~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~~-~l~~~~ 220 (413)
+.+.+.+++.|+++++++.|+++.. + ++.+.+++.+|+++.+|.||+|+|...+ .++...
T Consensus 230 ~~~~~~l~~~GV~v~~~~~V~~i~~--~--~~~~~v~l~dG~~i~aD~Vv~a~G~~pn~~l~~~~ 290 (493)
T 1m6i_A 230 NWTMEKVRREGVKVMPNAIVQSVGV--S--SGKLLIKLKDGRKVETDHIVAAVGLEPNVELAKTG 290 (493)
T ss_dssp HHHHHHHHTTTCEEECSCCEEEEEE--E--TTEEEEEETTSCEEEESEEEECCCEEECCTTHHHH
T ss_pred HHHHHHHHhcCCEEEeCCEEEEEEe--c--CCeEEEEECCCCEEECCEEEECCCCCccHHHHHHc
Confidence 3445566778999999999999987 5 3456788888988999999999998765 455544
No 211
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.35 E-value=5.1e-06 Score=78.43 Aligned_cols=55 Identities=15% Similarity=0.100 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcChh
Q 015072 155 AVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWVG 214 (413)
Q Consensus 155 ~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~~ 214 (413)
+.+.+.+.+++.|++++++++|+++.. . ++.+.+.++++ ++.+|.||+|+|...+
T Consensus 191 ~~~~l~~~l~~~GV~i~~~~~v~~i~~--~--~~~v~v~~~~g-~i~aD~Vv~A~G~~p~ 245 (452)
T 3oc4_A 191 MVAEVQKSLEKQAVIFHFEETVLGIEE--T--ANGIVLETSEQ-EISCDSGIFALNLHPQ 245 (452)
T ss_dssp HHHHHHHHHHTTTEEEEETCCEEEEEE--C--SSCEEEEESSC-EEEESEEEECSCCBCC
T ss_pred HHHHHHHHHHHcCCEEEeCCEEEEEEc--c--CCeEEEEECCC-EEEeCEEEECcCCCCC
Confidence 344555667778999999999999997 5 34557777777 6999999999997543
No 212
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.32 E-value=6.8e-06 Score=77.58 Aligned_cols=54 Identities=11% Similarity=0.087 Sum_probs=41.2
Q ss_pred HHHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEE-EEeCCccEEEeCeEEEcCCcChh
Q 015072 156 VSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVT-VVTSSGEEFWGKKCVVTAGAWVG 214 (413)
Q Consensus 156 ~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~-v~~~~g~~i~ad~vV~A~G~~~~ 214 (413)
.+.+.+.+++.|++++++++|+++.. + ++.+. +.+ +|+++.+|.||+|+|...+
T Consensus 194 ~~~l~~~l~~~Gv~i~~~~~v~~i~~--~--~~~v~~v~~-~g~~i~~D~vv~a~G~~p~ 248 (452)
T 2cdu_A 194 TDILAKDYEAHGVNLVLGSKVAAFEE--V--DDEIITKTL-DGKEIKSDIAILCIGFRPN 248 (452)
T ss_dssp HHHHHHHHHHTTCEEEESSCEEEEEE--E--TTEEEEEET-TSCEEEESEEEECCCEEEC
T ss_pred HHHHHHHHHHCCCEEEcCCeeEEEEc--C--CCeEEEEEe-CCCEEECCEEEECcCCCCC
Confidence 34455667788999999999999987 5 33343 444 6777999999999997654
No 213
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.30 E-value=6.4e-06 Score=78.62 Aligned_cols=53 Identities=15% Similarity=0.141 Sum_probs=39.9
Q ss_pred HHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcChh
Q 015072 157 SMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWVG 214 (413)
Q Consensus 157 ~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~~ 214 (413)
+.+.+.+++.|++++++++|+++.. + +....+.+ +|+++.+|.||+|+|...+
T Consensus 240 ~~l~~~l~~~GV~i~~~~~v~~i~~--~--~~v~~v~~-~g~~i~~D~Vi~a~G~~p~ 292 (490)
T 2bc0_A 240 DLMAKNMEEHGIQLAFGETVKEVAG--N--GKVEKIIT-DKNEYDVDMVILAVGFRPN 292 (490)
T ss_dssp HHHHHHHHTTTCEEEETCCEEEEEC--S--SSCCEEEE-SSCEEECSEEEECCCEEEC
T ss_pred HHHHHHHHhCCeEEEeCCEEEEEEc--C--CcEEEEEE-CCcEEECCEEEECCCCCcC
Confidence 3455667778999999999999987 5 23333545 5667999999999997644
No 214
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.29 E-value=5.1e-06 Score=78.56 Aligned_cols=35 Identities=23% Similarity=0.351 Sum_probs=32.0
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDF 41 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~ 41 (413)
..+++|||||.+|+.+|..|++.|.+|+|+|+.+.
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 205 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARER 205 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCc
Confidence 35799999999999999999999999999998754
No 215
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.28 E-value=5.3e-06 Score=78.80 Aligned_cols=54 Identities=24% Similarity=0.203 Sum_probs=40.5
Q ss_pred HHHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeC---Cc--cEEEeCeEEEcCCcChh
Q 015072 157 SMFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTS---SG--EEFWGKKCVVTAGAWVG 214 (413)
Q Consensus 157 ~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~---~g--~~i~ad~vV~A~G~~~~ 214 (413)
+.+.+.+++.|++++++++|+++.. + ++.+.+... +| +++.+|.||+|+|...+
T Consensus 222 ~~l~~~l~~~gv~i~~~~~v~~i~~--~--~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~ 280 (470)
T 1dxl_A 222 KQFQRSLEKQGMKFKLKTKVVGVDT--S--GDGVKLTVEPSAGGEQTIIEADVVLVSAGRTPF 280 (470)
T ss_dssp HHHHHHHHHSSCCEECSEEEEEEEC--S--SSSEEEEEEESSSCCCEEEEESEEECCCCEEEC
T ss_pred HHHHHHHHHcCCEEEeCCEEEEEEE--c--CCeEEEEEEecCCCcceEEECCEEEECCCCCcC
Confidence 3445667788999999999999988 6 334555432 34 57999999999998654
No 216
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.27 E-value=4.8e-06 Score=76.27 Aligned_cols=54 Identities=22% Similarity=0.273 Sum_probs=41.3
Q ss_pred HHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcChh-hhhhhh
Q 015072 158 MFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWVG-KLVKKI 220 (413)
Q Consensus 158 ~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~~-~l~~~~ 220 (413)
.+.+.+++.|++++++++|+++.. + .+.+++|+ +.+|.||+|+|...+ .+++.+
T Consensus 188 ~l~~~l~~~gV~i~~~~~v~~i~~--~------~v~~~~g~-i~~D~vi~a~G~~p~~~ll~~~ 242 (367)
T 1xhc_A 188 MIKDMLEETGVKFFLNSELLEANE--E------GVLTNSGF-IEGKVKICAIGIVPNVDLARRS 242 (367)
T ss_dssp HHHHHHHHTTEEEECSCCEEEECS--S------EEEETTEE-EECSCEEEECCEEECCHHHHHT
T ss_pred HHHHHHHHCCCEEEcCCEEEEEEe--e------EEEECCCE-EEcCEEEECcCCCcCHHHHHhC
Confidence 344566778999999999998865 3 25567888 999999999998755 365554
No 217
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.25 E-value=6.7e-07 Score=85.49 Aligned_cols=57 Identities=18% Similarity=0.100 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHHcCCeEecCceEEEEEeeeccCC------CcEEEEeCCc-----cEEEeCeEEEcCCc
Q 015072 153 TKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDVR------GGVTVVTSSG-----EEFWGKKCVVTAGA 211 (413)
Q Consensus 153 ~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~------~~~~v~~~~g-----~~i~ad~vV~A~G~ 211 (413)
.++..+|...+.+.+..++++++|+++.. .+.+ ..+.|++.++ +++.|+.||+|+|.
T Consensus 145 ~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~--~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~ 212 (501)
T 4b63_A 145 LEFEDYMRWCAQQFSDVVAYGEEVVEVIP--GKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGG 212 (501)
T ss_dssp HHHHHHHHHHHHTTGGGEEESEEEEEEEE--ECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHHHcCCceEcceEEEeecc--ccccccccccceEEEEEecCCCceEEEEEeCEEEECcCC
Confidence 56667777777776777889999999987 5321 2477776433 26899999999994
No 218
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.17 E-value=1.3e-06 Score=85.54 Aligned_cols=40 Identities=25% Similarity=0.429 Sum_probs=35.5
Q ss_pred CCCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCC
Q 015072 5 GENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHH 44 (413)
Q Consensus 5 ~~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~~~ 44 (413)
...+||+|||||++|+++|+.|+++|++|+|||+.+..++
T Consensus 44 ~~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg 83 (623)
T 3pl8_A 44 DIKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSG 83 (623)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSS
T ss_pred cccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCC
Confidence 3468999999999999999999999999999999887654
No 219
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=98.07 E-value=6.2e-06 Score=74.29 Aligned_cols=36 Identities=39% Similarity=0.393 Sum_probs=33.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCC
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLH 43 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~~ 43 (413)
+||+|||||.+|+.+|+.|+++|++|+|+|+.+...
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~~ 37 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKRM 37 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTSC
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCcC
Confidence 689999999999999999999999999999987543
No 220
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.06 E-value=2.2e-05 Score=74.40 Aligned_cols=35 Identities=11% Similarity=0.225 Sum_probs=32.0
Q ss_pred CccEEEECCCHHHHHHHHHHHHc--CCcEEEEcccCC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKR--GQKTLLLEQFDF 41 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~--g~~V~lvE~~~~ 41 (413)
..+|+|||||.+|+-+|..|++. +.+|+++++.+.
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~ 263 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASA 263 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSS
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCC
Confidence 46899999999999999999999 899999998754
No 221
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.06 E-value=3.8e-06 Score=79.11 Aligned_cols=39 Identities=28% Similarity=0.426 Sum_probs=35.4
Q ss_pred CCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCC
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHH 44 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~~~ 44 (413)
..+||+|||||++|+++|+.|+++|++|+|||+.+..|+
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG 159 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGG 159 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCST
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCC
Confidence 458999999999999999999999999999999876643
No 222
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.05 E-value=4.5e-05 Score=68.26 Aligned_cols=33 Identities=24% Similarity=0.319 Sum_probs=30.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
.+|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 146 ~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 178 (320)
T 1trb_A 146 QKVAVIGGGNTAVEEALYLSNIASEVHLIHRRD 178 (320)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCC
Confidence 579999999999999999999999999998754
No 223
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.04 E-value=5.5e-05 Score=72.09 Aligned_cols=33 Identities=24% Similarity=0.187 Sum_probs=30.4
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEccc
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~ 39 (413)
..+++|||||..|+-+|..|++.|.+|+++++.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~ 217 (488)
T 3dgz_A 185 PGKTLVVGASYVALECAGFLTGIGLDTTVMMRS 217 (488)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEcC
Confidence 357999999999999999999999999999874
No 224
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.04 E-value=2.9e-05 Score=73.16 Aligned_cols=34 Identities=21% Similarity=0.422 Sum_probs=31.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCC
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDF 41 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~ 41 (413)
.+++|||+|..|+-+|..|++.|.+|+|+++.+.
T Consensus 149 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 182 (449)
T 3kd9_A 149 ENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGER 182 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCc
Confidence 4899999999999999999999999999998653
No 225
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.02 E-value=4.5e-05 Score=68.79 Aligned_cols=33 Identities=21% Similarity=0.282 Sum_probs=30.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
.+|+|||+|..|+-+|..|++.|.+|+++++.+
T Consensus 153 ~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~ 185 (335)
T 2zbw_A 153 KRVLIVGGGDSAVDWALNLLDTARRITLIHRRP 185 (335)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCC
Confidence 579999999999999999999999999998864
No 226
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.97 E-value=5.4e-05 Score=69.25 Aligned_cols=56 Identities=13% Similarity=0.121 Sum_probs=41.8
Q ss_pred HHHHHHHHHHcC-CeEecCceEEEEEeeeccCCCcEEEEeCCccEEE-eCeEEEcCCcChhh
Q 015072 156 VSMFQTLAIKNG-AVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFW-GKKCVVTAGAWVGK 215 (413)
Q Consensus 156 ~~~l~~~~~~~g-v~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~-ad~vV~A~G~~~~~ 215 (413)
.+.+.+.+++.| ++++.+++|+++.. + .+.+.+.+.+|+++. +|.||+|+|...+.
T Consensus 217 ~~~l~~~l~~~g~v~~~~~~~v~~i~~--~--~~~~~v~~~~g~~~~~~d~vi~a~G~~~~~ 274 (369)
T 3d1c_A 217 RQRLGNVIKQGARIEMNVHYTVKDIDF--N--NGQYHISFDSGQSVHTPHEPILATGFDATK 274 (369)
T ss_dssp HHHHHHHHHTTCCEEEECSCCEEEEEE--E--TTEEEEEESSSCCEEESSCCEECCCBCGGG
T ss_pred HHHHHHHHhhCCcEEEecCcEEEEEEe--c--CCceEEEecCCeEeccCCceEEeeccCCcc
Confidence 344555566776 99999999999976 5 345667778887665 59999999987653
No 227
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.96 E-value=6.6e-06 Score=82.93 Aligned_cols=43 Identities=35% Similarity=0.436 Sum_probs=38.5
Q ss_pred CCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCC
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSS 48 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~~~~~~s 48 (413)
..++|+|||||++|+++|+.|+++|++|+|+|+.+..||+..+
T Consensus 277 ~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG~~~~ 319 (852)
T 2xag_A 277 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVAT 319 (852)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCCE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCCceee
Confidence 3579999999999999999999999999999999888776544
No 228
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.96 E-value=6.5e-06 Score=81.44 Aligned_cols=43 Identities=35% Similarity=0.436 Sum_probs=38.6
Q ss_pred CCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCCC
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSS 48 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~~~~~~s 48 (413)
..+||+|||||++|+++|+.|+++|++|+|+|+.+..||...+
T Consensus 106 ~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~~ 148 (662)
T 2z3y_A 106 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVAT 148 (662)
T ss_dssp CCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTCCE
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCCcccc
Confidence 4589999999999999999999999999999999888776544
No 229
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.93 E-value=5.3e-05 Score=69.10 Aligned_cols=33 Identities=21% Similarity=0.208 Sum_probs=30.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
.+|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 164 ~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~ 196 (360)
T 3ab1_A 164 KRVVIVGGGDSALDWTVGLIKNAASVTLVHRGH 196 (360)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCC
Confidence 479999999999999999999999999998864
No 230
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.90 E-value=0.00014 Score=69.83 Aligned_cols=32 Identities=25% Similarity=0.196 Sum_probs=29.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEccc
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~ 39 (413)
.+++|||||..|+-+|..|++.|.+|+|+++.
T Consensus 211 ~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~ 242 (519)
T 3qfa_A 211 GKTLVVGASYVALECAGFLAGIGLDVTVMVRS 242 (519)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEecc
Confidence 46999999999999999999999999999874
No 231
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.82 E-value=0.00016 Score=68.51 Aligned_cols=35 Identities=29% Similarity=0.463 Sum_probs=31.8
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDF 41 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~ 41 (413)
..+++|||||..|+-+|..|++.|.+|+++++.+.
T Consensus 172 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 206 (466)
T 3l8k_A 172 PQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDR 206 (466)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCc
Confidence 35799999999999999999999999999998653
No 232
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.81 E-value=0.0003 Score=68.77 Aligned_cols=32 Identities=22% Similarity=0.213 Sum_probs=30.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEccc
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~ 39 (413)
.+++|||||.+|+-+|..|++.|.+|+|+++.
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 47999999999999999999999999999875
No 233
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.81 E-value=2e-05 Score=76.31 Aligned_cols=66 Identities=15% Similarity=0.162 Sum_probs=49.9
Q ss_pred EEEecCCeeecHHHHHHHHHHHHHHcCCeEecCceEEEEEeeeccC-CCcEEEEeCCccEEEeCeEEEcCCc
Q 015072 141 GVTTELGGVIKPTKAVSMFQTLAIKNGAVLRDNTEVKTVLKVKDDV-RGGVTVVTSSGEEFWGKKCVVTAGA 211 (413)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~l~~~~~~~gv~i~~~~~V~~i~~~~~~~-~~~~~v~~~~g~~i~ad~vV~A~G~ 211 (413)
+++++.+|. ..+.++|.+.+...|++++++++|.+|.. +++ +....|.+.+|++++||+||.....
T Consensus 369 g~~yp~GG~---g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~--~~~~g~v~gV~~~~Ge~i~A~~VVs~~~~ 435 (650)
T 1vg0_A 369 PFLFPLYGQ---GELPQCFCRMCAVFGGIYCLRHSVQCLVV--DKESRKCKAVIDQFGQRIISKHFIIEDSY 435 (650)
T ss_dssp SEEEETTCT---THHHHHHHHHHHHTTCEEESSCCEEEEEE--ETTTCCEEEEEETTSCEEECSEEEEEGGG
T ss_pred ceEEeCCch---hHHHHHHHHHHHHcCCEEEeCCEeeEEEE--eCCCCeEEEEEeCCCCEEEcCEEEEChhh
Confidence 344444443 67889999999999999999999999998 742 2344566678989999999985543
No 234
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=97.76 E-value=9.7e-05 Score=66.05 Aligned_cols=35 Identities=29% Similarity=0.261 Sum_probs=31.4
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDF 41 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~ 41 (413)
..+++|||+|..|+-+|..|++.|.+|+++++.+.
T Consensus 154 ~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~ 188 (323)
T 3f8d_A 154 NRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDT 188 (323)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCC
Confidence 35799999999999999999999999999998643
No 235
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=97.76 E-value=0.00015 Score=65.30 Aligned_cols=35 Identities=31% Similarity=0.386 Sum_probs=31.4
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDF 41 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~ 41 (413)
..+++|||+|.+|+-+|..|++.|.+|+++++.+.
T Consensus 173 ~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~ 207 (338)
T 3itj_A 173 NKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDH 207 (338)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCc
Confidence 35799999999999999999999999999998643
No 236
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.71 E-value=2.3e-05 Score=73.82 Aligned_cols=38 Identities=24% Similarity=0.197 Sum_probs=34.3
Q ss_pred CccEEEECCCHHHHHHHHHHHH-c------CCcEEEEcccCCCCC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAK-R------GQKTLLLEQFDFLHH 44 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~-~------g~~V~lvE~~~~~~~ 44 (413)
.+||+|||||++|+++|..|++ + |.+|+|||+.+..++
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg 47 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWG 47 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCST
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCC
Confidence 5799999999999999999999 7 999999999876543
No 237
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.70 E-value=2.7e-05 Score=74.20 Aligned_cols=39 Identities=21% Similarity=0.373 Sum_probs=34.2
Q ss_pred CCCCccEEEECCCHHHHHHHHHHHHc--CCcEEEEcccCCC
Q 015072 4 SGENFDVIVVGAGIMGSSAAYQLAKR--GQKTLLLEQFDFL 42 (413)
Q Consensus 4 ~~~~~dvvIIGgG~aG~~~A~~L~~~--g~~V~lvE~~~~~ 42 (413)
++.++||+|||||++|+++|..|+++ |.+|+|||+.+..
T Consensus 8 ~~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~ 48 (493)
T 1m6i_A 8 APSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPEL 48 (493)
T ss_dssp CCSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSC
T ss_pred CCCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCC
Confidence 44568999999999999999999887 8899999998643
No 238
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=97.68 E-value=2.7e-05 Score=76.44 Aligned_cols=36 Identities=25% Similarity=0.428 Sum_probs=33.5
Q ss_pred CccEEEECCCHHHHHHHHHHHHcC--------CcEEEEcccC-CC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRG--------QKTLLLEQFD-FL 42 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g--------~~V~lvE~~~-~~ 42 (413)
.++|+|||||++|+++|+.|+++| ++|+|+|+.+ ..
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 478999999999999999999998 9999999987 66
No 239
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.67 E-value=0.00022 Score=68.66 Aligned_cols=35 Identities=17% Similarity=0.182 Sum_probs=32.1
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDF 41 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~ 41 (413)
..+|+|||+|.+|+-+|..|++.+.+|+|+++.+.
T Consensus 185 ~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~ 219 (545)
T 3uox_A 185 GKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPN 219 (545)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCC
T ss_pred CCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCC
Confidence 35799999999999999999999999999999764
No 240
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.66 E-value=0.00016 Score=64.66 Aligned_cols=33 Identities=21% Similarity=0.356 Sum_probs=30.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
.+++|||+|..|+-+|..|++.|.+|+++++.+
T Consensus 156 ~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~ 188 (319)
T 3cty_A 156 KRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMP 188 (319)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTBSEEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCC
Confidence 579999999999999999999999999998753
No 241
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.64 E-value=0.00045 Score=61.38 Aligned_cols=34 Identities=32% Similarity=0.371 Sum_probs=31.0
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
..+|+|||+|..|+-+|..|++.|.+|+++++.+
T Consensus 143 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 176 (311)
T 2q0l_A 143 NKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRD 176 (311)
T ss_dssp TSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCC
Confidence 3579999999999999999999999999998754
No 242
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.64 E-value=0.0002 Score=64.24 Aligned_cols=33 Identities=21% Similarity=0.312 Sum_probs=30.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
.+++|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 153 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 185 (325)
T 2q7v_A 153 KKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRD 185 (325)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCC
Confidence 579999999999999999999999999999754
No 243
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.63 E-value=0.00017 Score=64.22 Aligned_cols=33 Identities=30% Similarity=0.321 Sum_probs=30.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
.+++|||+|..|+-+|..|++.|.+|+++++.+
T Consensus 148 ~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~ 180 (315)
T 3r9u_A 148 KEVAVLGGGDTALEEALYLANICSKIYLIHRRD 180 (315)
T ss_dssp SEEEEECCBHHHHHHHHHHHTTSSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCC
Confidence 579999999999999999999999999998764
No 244
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.61 E-value=4.8e-05 Score=78.94 Aligned_cols=38 Identities=24% Similarity=0.361 Sum_probs=34.5
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCC-cEEEEcccCCCCC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQ-KTLLLEQFDFLHH 44 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~-~V~lvE~~~~~~~ 44 (413)
.+||+|||||++|+++|+.|+++|+ +|+|||+.+..||
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG 225 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGG 225 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCST
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCc
Confidence 5799999999999999999999999 7999999876654
No 245
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.61 E-value=5.1e-05 Score=71.54 Aligned_cols=38 Identities=24% Similarity=0.213 Sum_probs=34.2
Q ss_pred CCccEEEECCCHHHHHHHHHHHHcC--CcEEEEcccCCCC
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAKRG--QKTLLLEQFDFLH 43 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~~g--~~V~lvE~~~~~~ 43 (413)
..+||+|||||++|+.+|..|+++| ++|+|||+.+..+
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~g 44 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPF 44 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSC
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCC
Confidence 4589999999999999999999998 9999999987664
No 246
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.57 E-value=0.0011 Score=63.80 Aligned_cols=35 Identities=20% Similarity=0.181 Sum_probs=32.2
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDF 41 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~ 41 (413)
..+|+|||+|.+|+-+|..|++.+.+|+|+++.+.
T Consensus 178 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 178 GRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred cceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 45799999999999999999999999999998764
No 247
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.56 E-value=0.00028 Score=62.69 Aligned_cols=33 Identities=36% Similarity=0.329 Sum_probs=30.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
.+|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 145 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 177 (310)
T 1fl2_A 145 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAP 177 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTBSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCc
Confidence 579999999999999999999999999998764
No 248
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=97.51 E-value=0.00023 Score=68.57 Aligned_cols=35 Identities=17% Similarity=0.251 Sum_probs=32.1
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDF 41 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~ 41 (413)
..+|+|||+|.+|+-+|..|++.+.+|+++++.+.
T Consensus 191 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 191 GKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSAN 225 (549)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 35799999999999999999999999999999764
No 249
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.51 E-value=0.00057 Score=61.26 Aligned_cols=33 Identities=18% Similarity=0.218 Sum_probs=30.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
.+++|||+|..|+-+|..|++.|.+|+++++.+
T Consensus 155 ~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~ 187 (332)
T 3lzw_A 155 RRVAILGGGDSAVDWALMLEPIAKEVSIIHRRD 187 (332)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTBSEEEEECSSS
T ss_pred CEEEEECCCHhHHHHHHHHHhhCCeEEEEEecC
Confidence 579999999999999999999999999998754
No 250
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=97.50 E-value=0.00029 Score=62.11 Aligned_cols=52 Identities=13% Similarity=0.211 Sum_probs=39.4
Q ss_pred HHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcChh-hhhhhh
Q 015072 161 TLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWVG-KLVKKI 220 (413)
Q Consensus 161 ~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~~-~l~~~~ 220 (413)
+.+.+.|++++. ++|+++.. + + .+.+.+|+++.+|.||+|+|...+ .++..+
T Consensus 182 ~~l~~~gv~i~~-~~v~~i~~--~---~--~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~~ 234 (297)
T 3fbs_A 182 ALLAARGVRVET-TRIREIAG--H---A--DVVLADGRSIALAGLFTQPKLRITVDWIEKL 234 (297)
T ss_dssp HHHHHTTCEEEC-SCEEEEET--T---E--EEEETTSCEEEESEEEECCEEECCCSCHHHH
T ss_pred HHHHHCCcEEEc-ceeeeeec--C---C--eEEeCCCCEEEEEEEEEccCcccCchhHHhc
Confidence 345567999985 89999877 5 2 677788888999999999997633 555554
No 251
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.46 E-value=0.00041 Score=62.31 Aligned_cols=34 Identities=29% Similarity=0.379 Sum_probs=31.0
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
..+|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 159 ~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~ 192 (333)
T 1vdc_A 159 NKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRD 192 (333)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred CCeEEEECCChHHHHHHHHHHhcCCeEEEEecCC
Confidence 3579999999999999999999999999999864
No 252
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.39 E-value=0.00035 Score=62.94 Aligned_cols=34 Identities=24% Similarity=0.324 Sum_probs=30.8
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
..+|+|||+|..|+-+|..|++.|.+|+++++.+
T Consensus 155 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~ 188 (335)
T 2a87_A 155 DQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRD 188 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCC
Confidence 3579999999999999999999999999998754
No 253
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.32 E-value=0.0019 Score=60.82 Aligned_cols=35 Identities=11% Similarity=0.104 Sum_probs=29.7
Q ss_pred CccEEEECCCHHHHHHHHHHH--------------------HcCC-cEEEEcccCC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLA--------------------KRGQ-KTLLLEQFDF 41 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~--------------------~~g~-~V~lvE~~~~ 41 (413)
..+|+|||+|..|+-+|..|+ +.|. +|+||++...
T Consensus 145 ~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~ 200 (460)
T 1cjc_A 145 CDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGP 200 (460)
T ss_dssp SSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCG
T ss_pred CCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCCh
Confidence 357999999999999999999 5576 6999988654
No 254
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.15 E-value=0.0016 Score=61.22 Aligned_cols=58 Identities=16% Similarity=0.093 Sum_probs=38.8
Q ss_pred HHHHHHHHHH------cCCeEecCceEEEEEeeeccCCCcEEEEe--------------CCc--cEEEeCeEEEcCCcCh
Q 015072 156 VSMFQTLAIK------NGAVLRDNTEVKTVLKVKDDVRGGVTVVT--------------SSG--EEFWGKKCVVTAGAWV 213 (413)
Q Consensus 156 ~~~l~~~~~~------~gv~i~~~~~V~~i~~~~~~~~~~~~v~~--------------~~g--~~i~ad~vV~A~G~~~ 213 (413)
.+.+.+.+.+ .|+++++++.+++|.. ++.-..+.+.. .+| +++.+|.||+|+|...
T Consensus 249 ~~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~--~~~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~~p 326 (456)
T 1lqt_A 249 IKVLRGYADREPRPGHRRMVFRFLTSPIEIKG--KRKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGYRG 326 (456)
T ss_dssp HHHHHHHHTCC-CTTSEEEEEECSEEEEEEEC--SSSCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECSEEEECSCEEC
T ss_pred HHHHHHHhhcCCCCCCceEEEEeCCCCeEEec--CCcEeEEEEEEEEecCCCcccccccCCCceEEEEcCEEEEcccccc
Confidence 4445555555 6899999999999987 52112244331 134 3699999999999866
Q ss_pred hh
Q 015072 214 GK 215 (413)
Q Consensus 214 ~~ 215 (413)
..
T Consensus 327 ~~ 328 (456)
T 1lqt_A 327 VP 328 (456)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 255
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.08 E-value=0.0015 Score=62.66 Aligned_cols=33 Identities=36% Similarity=0.329 Sum_probs=30.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
.+|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 356 k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~ 388 (521)
T 1hyu_A 356 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAP 388 (521)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHBSEEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCc
Confidence 579999999999999999999999999998754
No 256
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=96.98 E-value=0.0023 Score=66.05 Aligned_cols=33 Identities=12% Similarity=0.087 Sum_probs=30.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
..|+|||+|..|+-+|..|++.|.+|+|||+.+
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~ 317 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARS 317 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCS
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCC
Confidence 579999999999999999999999999999854
No 257
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.96 E-value=0.00092 Score=52.65 Aligned_cols=36 Identities=17% Similarity=0.434 Sum_probs=32.4
Q ss_pred CCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCC
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDF 41 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~ 41 (413)
....|+|||+|..|..+|..|.+.|.+|+++|+.+.
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~ 53 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEY 53 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 456899999999999999999999999999998653
No 258
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=96.94 E-value=0.014 Score=56.21 Aligned_cols=34 Identities=24% Similarity=0.349 Sum_probs=31.1
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
...|+|||+|.+|+-+|..|++.+.+|+++++.+
T Consensus 186 gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~ 219 (542)
T 1w4x_A 186 GQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTP 219 (542)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSC
T ss_pred CCEEEEECCCccHHHHHHHHhhcCceEEEEEcCC
Confidence 3579999999999999999999999999999864
No 259
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=96.83 E-value=0.0012 Score=51.02 Aligned_cols=33 Identities=24% Similarity=0.494 Sum_probs=30.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
..++|+|+|..|..+|..|.++|++|+++|+++
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 579999999999999999999999999999864
No 260
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=96.74 E-value=0.0034 Score=58.90 Aligned_cols=34 Identities=21% Similarity=0.260 Sum_probs=30.2
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCC-cEEEEcccC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQ-KTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~-~V~lvE~~~ 40 (413)
..+|+|||||.+|+-+|..+.+.|. +|+++++.+
T Consensus 264 gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~ 298 (456)
T 2vdc_G 264 GKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRD 298 (456)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCC
Confidence 3579999999999999999999997 599998764
No 261
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=96.73 E-value=0.0052 Score=57.33 Aligned_cols=57 Identities=16% Similarity=0.051 Sum_probs=41.1
Q ss_pred HHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEeC--CccEEEeCeEEEcCCcChhhhhhhh
Q 015072 158 MFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTS--SGEEFWGKKCVVTAGAWVGKLVKKI 220 (413)
Q Consensus 158 ~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~--~g~~i~ad~vV~A~G~~~~~l~~~~ 220 (413)
.+.+.+++.|++++++++|++|+. + .+.+... +++++.+|.||+|+|......+..+
T Consensus 205 ~l~~~l~~~GV~i~~~~~v~~v~~--~----~v~~~~~~~~g~~i~~D~vv~a~G~~~~~~l~~~ 263 (430)
T 3h28_A 205 LVEDLFAERNIDWIANVAVKAIEP--D----KVIYEDLNGNTHEVPAKFTMFMPSFQGPEVVASA 263 (430)
T ss_dssp HHHHHHHHTTCEEECSCEEEEECS--S----EEEEECTTSCEEEEECSEEEEECEEECCHHHHTT
T ss_pred HHHHHHHHCCCEEEeCCEEEEEeC--C----eEEEEecCCCceEEeeeEEEECCCCccchhHhhc
Confidence 445667788999999999999866 4 2444432 2567999999999997655444443
No 262
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=96.68 E-value=0.015 Score=60.37 Aligned_cols=33 Identities=27% Similarity=0.275 Sum_probs=30.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCC-cEEEEcccC
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKRGQ-KTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~g~-~V~lvE~~~ 40 (413)
.+|+|||||.+|+-+|..|++.|. +|+|+++.+
T Consensus 333 ~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 333 GAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CcEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 389999999999999999999996 899999854
No 263
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=96.64 E-value=0.0017 Score=49.90 Aligned_cols=33 Identities=24% Similarity=0.489 Sum_probs=30.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
++|+|||+|..|..+|..|.+.|++|+++|+.+
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 579999999999999999999999999999753
No 264
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=96.63 E-value=0.0091 Score=55.78 Aligned_cols=52 Identities=12% Similarity=-0.056 Sum_probs=37.0
Q ss_pred HHHHHHHHcCCeEecCceEEEEEeeeccCCCcEEEEe--CC-----ccEEEeCeEEEcCCcChhh
Q 015072 158 MFQTLAIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVT--SS-----GEEFWGKKCVVTAGAWVGK 215 (413)
Q Consensus 158 ~l~~~~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~--~~-----g~~i~ad~vV~A~G~~~~~ 215 (413)
.+.+.+++.|++++++++|++|+. + .+.+.. .+ ++++.+|.||+|+|.....
T Consensus 213 ~~~~~l~~~gI~~~~~~~v~~v~~--~----~v~~~~~~~~g~~~~~~~i~~D~vv~~~g~~~~~ 271 (437)
T 3sx6_A 213 ILTKGLKEEGIEAYTNCKVTKVED--N----KMYVTQVDEKGETIKEMVLPVKFGMMIPAFKGVP 271 (437)
T ss_dssp HHHHHHHHTTCEEECSEEEEEEET--T----EEEEEEECTTSCEEEEEEEECSEEEEECCEECCH
T ss_pred HHHHHHHHCCCEEEcCCEEEEEEC--C----eEEEEecccCCccccceEEEEeEEEEcCCCcCch
Confidence 344566778999999999999976 4 233332 33 4579999999999854433
No 265
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.55 E-value=0.0028 Score=48.82 Aligned_cols=34 Identities=21% Similarity=0.237 Sum_probs=31.6
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
+-.|+|||.|..|..+|..|.+.|++|+++|+++
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 4579999999999999999999999999999875
No 266
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=96.52 E-value=0.0058 Score=55.14 Aligned_cols=33 Identities=18% Similarity=0.371 Sum_probs=29.4
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
..+|+|||+|.+|+-+|..|++.| +|+++.+..
T Consensus 163 ~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~ 195 (357)
T 4a9w_A 163 GMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHE 195 (357)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSC
T ss_pred CCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCC
Confidence 357999999999999999999998 699998763
No 267
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=96.45 E-value=0.003 Score=46.81 Aligned_cols=34 Identities=24% Similarity=0.306 Sum_probs=30.7
Q ss_pred CccEEEECCCHHHHHHHHHHHHcC-CcEEEEcccC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRG-QKTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g-~~V~lvE~~~ 40 (413)
...|+|+|+|..|..++..|.+.| ++|+++++..
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 357999999999999999999999 8999999853
No 268
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=96.43 E-value=0.0044 Score=48.56 Aligned_cols=33 Identities=27% Similarity=0.461 Sum_probs=30.8
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEccc
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~ 39 (413)
+..++|+|+|..|..+|..|.+.|++|+++|++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 356999999999999999999999999999986
No 269
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=96.42 E-value=0.38 Score=46.76 Aligned_cols=46 Identities=26% Similarity=0.398 Sum_probs=40.5
Q ss_pred CCCCCCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCC
Q 015072 2 EFSGENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGS 47 (413)
Q Consensus 2 ~~~~~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~~~~~~ 47 (413)
..+.++|||+|||+|+.|+.+|..|++.|++|++||+++..||..+
T Consensus 3 ~~~~~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~~~ 48 (650)
T 1vg0_A 3 DNLPSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWA 48 (650)
T ss_dssp CCCCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGC
T ss_pred ccCCCcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCccc
Confidence 4455689999999999999999999999999999999998776543
No 270
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=96.30 E-value=0.004 Score=55.29 Aligned_cols=40 Identities=35% Similarity=0.637 Sum_probs=30.8
Q ss_pred CCCCCCCccEEEECCCHHHHHHHHHHHHcCC--cEEEEcccC
Q 015072 1 MEFSGENFDVIVVGAGIMGSSAAYQLAKRGQ--KTLLLEQFD 40 (413)
Q Consensus 1 M~~~~~~~dvvIIGgG~aG~~~A~~L~~~g~--~V~lvE~~~ 40 (413)
|+|+++..+|+|||+|..|.++|+.|+..+. +|+++|...
T Consensus 1 ~~m~~~~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 1 MEMVKSRSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp ------CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCCCCCCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 5543445789999999999999999999987 899999764
No 271
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=96.27 E-value=0.035 Score=52.81 Aligned_cols=33 Identities=24% Similarity=0.422 Sum_probs=29.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHc--CCcEEEEcccC
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKR--GQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~--g~~V~lvE~~~ 40 (413)
.+|+|||+|.+|+-++..|+++ +.+|+++-+.+
T Consensus 247 KrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~ 281 (501)
T 4b63_A 247 YNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDS 281 (501)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSS
T ss_pred cEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCC
Confidence 5799999999999999999986 67999997754
No 272
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=96.24 E-value=0.0037 Score=55.20 Aligned_cols=34 Identities=32% Similarity=0.437 Sum_probs=30.7
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
...|.|||+|..|...|..++..|++|+|+|..+
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3579999999999999999999999999999753
No 273
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=96.20 E-value=0.0047 Score=53.97 Aligned_cols=33 Identities=30% Similarity=0.438 Sum_probs=30.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
..|.|||+|..|..+|..|++.|++|+++|+.+
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 579999999999999999999999999999753
No 274
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=96.16 E-value=0.034 Score=48.93 Aligned_cols=54 Identities=7% Similarity=0.040 Sum_probs=35.7
Q ss_pred HHHcCCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcChh-hhhhhh
Q 015072 163 AIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAWVG-KLVKKI 220 (413)
Q Consensus 163 ~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~~~-~l~~~~ 220 (413)
+.+.|+.++.+ .++.+.. ++ .....+++.+|+++.+|.+|+++|...+ .++..+
T Consensus 190 l~~~g~~~~~~-~v~~~~~--~~-~~~~~v~~~~g~~i~~~~~vi~~g~~~~~~~~~~~ 244 (304)
T 4fk1_A 190 LSNKNIPVITE-SIRTLQG--EG-GYLKKVEFHSGLRIERAGGFIVPTFFRPNQFIEQL 244 (304)
T ss_dssp HHTTTCCEECS-CEEEEES--GG-GCCCEEEETTSCEECCCEEEECCEEECSSCHHHHT
T ss_pred hhccceeEeee-eEEEeec--CC-CeeeeeeccccceeeecceeeeeccccCChhhhhc
Confidence 34467777754 4777766 52 2344577889988999999998886543 444444
No 275
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=96.12 E-value=0.0054 Score=56.25 Aligned_cols=35 Identities=17% Similarity=0.339 Sum_probs=32.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCC
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFL 42 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~ 42 (413)
.+|+|||||..|+-+|..|++.|.+|+|+|+.+..
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~ 181 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIIDSGTPASIGIILEYP 181 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCcc
Confidence 57999999999999999999999999999987654
No 276
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=96.06 E-value=0.0051 Score=54.34 Aligned_cols=40 Identities=33% Similarity=0.425 Sum_probs=31.5
Q ss_pred CCCCCCCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 1 MEFSGENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 1 M~~~~~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
|....+.++|.|||.|..|...|..|++.|++|+++++.+
T Consensus 1 M~~~~~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 1 MSLTGTDFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp ------CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCCCCCCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 4433345689999999999999999999999999999764
No 277
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=96.05 E-value=0.0052 Score=54.54 Aligned_cols=34 Identities=32% Similarity=0.437 Sum_probs=30.8
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
...|.|||+|..|...|..|+++|++|+++|+.+
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999999864
No 278
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=96.02 E-value=0.0078 Score=53.78 Aligned_cols=34 Identities=24% Similarity=0.470 Sum_probs=31.1
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCC-cEEEEcccC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQ-KTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~-~V~lvE~~~ 40 (413)
.++|+|||+|..|..+|..|++.|+ +|+|+|.+.
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 4689999999999999999999998 999999864
No 279
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=96.01 E-value=0.0067 Score=46.68 Aligned_cols=33 Identities=24% Similarity=0.414 Sum_probs=30.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
..|+|+|+|..|..+|..|.+.|++|+++|+..
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 469999999999999999999999999999764
No 280
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=96.00 E-value=0.005 Score=54.59 Aligned_cols=34 Identities=21% Similarity=0.217 Sum_probs=31.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCC
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDF 41 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~ 41 (413)
.+++|||||..|+-+|..|++.|.+|+|+|+.+.
T Consensus 146 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 179 (312)
T 4gcm_A 146 KRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDE 179 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEecccc
Confidence 4799999999999999999999999999998754
No 281
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=95.99 E-value=0.0066 Score=54.11 Aligned_cols=33 Identities=30% Similarity=0.527 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
++|+|||+|..|...|..|++.|++|+++++..
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 579999999999999999999999999999853
No 282
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=95.97 E-value=0.0076 Score=53.61 Aligned_cols=34 Identities=24% Similarity=0.493 Sum_probs=31.0
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCC-cEEEEcccC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQ-KTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~-~V~lvE~~~ 40 (413)
..+|+|||+|..|..+|..|++.|+ +|+++|...
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 4579999999999999999999998 999999864
No 283
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=95.92 E-value=0.0097 Score=52.62 Aligned_cols=36 Identities=33% Similarity=0.516 Sum_probs=32.3
Q ss_pred CCCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 5 GENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 5 ~~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
....+|.|||.|..|...|..|++.|++|+++++.+
T Consensus 7 ~~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 7 SFEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp CCSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred cCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 345689999999999999999999999999998764
No 284
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=95.92 E-value=0.0086 Score=52.86 Aligned_cols=33 Identities=33% Similarity=0.563 Sum_probs=30.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
..|.|||+|..|..+|..|++.|++|+++|+.+
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 469999999999999999999999999999853
No 285
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=95.85 E-value=0.0062 Score=50.89 Aligned_cols=32 Identities=16% Similarity=0.241 Sum_probs=30.1
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 9 DVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 9 dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
+|+|||+|..|..+|..|.++|++|+++|+++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 49999999999999999999999999999864
No 286
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=95.84 E-value=0.0071 Score=53.66 Aligned_cols=33 Identities=27% Similarity=0.451 Sum_probs=30.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
++|+|||+|..|.+.|..|++.|++|++++++.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 569999999999999999999999999999853
No 287
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.80 E-value=0.0088 Score=48.37 Aligned_cols=34 Identities=29% Similarity=0.490 Sum_probs=31.2
Q ss_pred CccEEEECCCHHHHHHHHHHHHc-CCcEEEEcccC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKR-GQKTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~-g~~V~lvE~~~ 40 (413)
...|+|||+|..|..+|..|.+. |++|+++|+++
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 35799999999999999999999 99999999864
No 288
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=95.73 E-value=0.03 Score=52.50 Aligned_cols=36 Identities=39% Similarity=0.431 Sum_probs=32.5
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFL 42 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~ 42 (413)
..+++|||||.+|+.+|..|++.|.+|+|+|+.+..
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 202 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAP 202 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCch
Confidence 357999999999999999999999999999987543
No 289
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=95.70 E-value=0.0072 Score=53.19 Aligned_cols=35 Identities=14% Similarity=0.146 Sum_probs=32.0
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDF 41 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~ 41 (413)
..+|.|||.|..|...|..|++.|++|+++|+.+.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 46899999999999999999999999999998653
No 290
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=95.68 E-value=0.01 Score=53.65 Aligned_cols=34 Identities=32% Similarity=0.485 Sum_probs=31.3
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
.++|.|||+|..|.++|..|++.|++|+++++++
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 4689999999999999999999999999999853
No 291
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=95.66 E-value=0.01 Score=55.70 Aligned_cols=36 Identities=28% Similarity=0.481 Sum_probs=32.5
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFL 42 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~ 42 (413)
..+++|||||.+|+.+|..|++.|.+|+|+|+.+..
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~ 202 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRI 202 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCcc
Confidence 357999999999999999999999999999987653
No 292
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=95.64 E-value=0.013 Score=52.65 Aligned_cols=32 Identities=28% Similarity=0.378 Sum_probs=30.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEccc
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~ 39 (413)
++|+|||+|..|...|..|++.|++|+++++.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 57999999999999999999999999999874
No 293
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=95.64 E-value=0.011 Score=53.67 Aligned_cols=33 Identities=30% Similarity=0.255 Sum_probs=30.5
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEccc
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~ 39 (413)
.++|+|||+|..|...|..|++.|++|+++++.
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~ 36 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKGQSVLAWDID 36 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 357999999999999999999999999999875
No 294
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=95.63 E-value=0.0089 Score=52.52 Aligned_cols=33 Identities=27% Similarity=0.563 Sum_probs=30.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
++|+|||+|..|...|..|++.|.+|+++++..
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 569999999999999999999999999999863
No 295
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=95.58 E-value=0.014 Score=51.84 Aligned_cols=34 Identities=18% Similarity=0.486 Sum_probs=30.7
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCC-cEEEEcccC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQ-KTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~-~V~lvE~~~ 40 (413)
..+|+|||+|..|..+|..|+..|+ +|+|+|.+.
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 3579999999999999999999998 999999753
No 296
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=95.58 E-value=0.0097 Score=52.67 Aligned_cols=34 Identities=35% Similarity=0.489 Sum_probs=31.1
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
..+++|||||..|+-+|..|++.|.+|+|+++..
T Consensus 152 ~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~ 185 (314)
T 4a5l_A 152 NKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRD 185 (314)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred CCeEEEECCChHHHHHHHHHHHhCCeeeeecccc
Confidence 3579999999999999999999999999999754
No 297
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=95.56 E-value=0.01 Score=55.42 Aligned_cols=33 Identities=27% Similarity=0.399 Sum_probs=30.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
++|.|||.|..|+.+|..|+++|++|+++|+++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 579999999999999999999999999999864
No 298
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=95.56 E-value=0.012 Score=52.33 Aligned_cols=34 Identities=32% Similarity=0.515 Sum_probs=30.9
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCC--cEEEEcccC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQ--KTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~--~V~lvE~~~ 40 (413)
.++|+|||+|..|..+|..|++.|+ +|+++|+..
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4679999999999999999999998 999999853
No 299
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=95.54 E-value=0.012 Score=55.49 Aligned_cols=34 Identities=21% Similarity=0.404 Sum_probs=31.5
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
.++|.|||.|..|+.+|..|++.|++|+++|++.
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4789999999999999999999999999999753
No 300
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=95.52 E-value=0.01 Score=54.78 Aligned_cols=34 Identities=21% Similarity=0.413 Sum_probs=30.6
Q ss_pred CCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
..++|.|||.|..|+.+|..|++ |++|+++|.++
T Consensus 35 ~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~ 68 (432)
T 3pid_A 35 EFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQ 68 (432)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCH
T ss_pred CCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCH
Confidence 34689999999999999999998 99999999864
No 301
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=95.52 E-value=0.013 Score=53.71 Aligned_cols=36 Identities=22% Similarity=0.411 Sum_probs=32.6
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFL 42 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~ 42 (413)
..+++|||+|..|+.+|..|++.|.+|+|+|+.+..
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 180 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQV 180 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcch
Confidence 467999999999999999999999999999987653
No 302
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=95.51 E-value=0.016 Score=51.17 Aligned_cols=34 Identities=29% Similarity=0.509 Sum_probs=31.2
Q ss_pred CCccEEEECCCHHHHHHHHHHHHcCC-cEEEEccc
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAKRGQ-KTLLLEQF 39 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~~g~-~V~lvE~~ 39 (413)
+..+|.|||+|..|.++|+.|++.|+ +|+|+|..
T Consensus 7 ~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 7 KRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 34679999999999999999999999 99999986
No 303
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=95.49 E-value=0.015 Score=52.02 Aligned_cols=40 Identities=18% Similarity=0.233 Sum_probs=32.3
Q ss_pred CCCCCCCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 1 MEFSGENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 1 M~~~~~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
|+.......|.|||.|..|.+.|..|.+.|++|+++|+.+
T Consensus 2 m~~~~~~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 2 MTTKDISRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp ----CCSSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCccCCCCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4433445679999999999999999999999999999864
No 304
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.47 E-value=0.013 Score=55.02 Aligned_cols=34 Identities=32% Similarity=0.302 Sum_probs=31.5
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
...|+|||.|.+|+++|..|.++|++|++.|...
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 4679999999999999999999999999999854
No 305
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=95.44 E-value=0.016 Score=48.00 Aligned_cols=35 Identities=17% Similarity=0.344 Sum_probs=31.3
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDF 41 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~ 41 (413)
.++|.|||+|..|.+.|..|++.|++|+++++.+.
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 46799999999999999999999999999998643
No 306
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=95.42 E-value=0.014 Score=51.76 Aligned_cols=32 Identities=31% Similarity=0.614 Sum_probs=29.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEccc
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~ 39 (413)
++|.|||+|..|...|..|++.|++|+++++.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECC
Confidence 46999999999999999999999999999875
No 307
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=95.36 E-value=0.016 Score=50.70 Aligned_cols=32 Identities=22% Similarity=0.328 Sum_probs=29.9
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 9 DVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 9 dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
+|.|||+|..|...|..|++.|++|+++++..
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 33 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVP 33 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCc
Confidence 49999999999999999999999999999864
No 308
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=95.34 E-value=0.0059 Score=57.28 Aligned_cols=35 Identities=20% Similarity=0.432 Sum_probs=32.0
Q ss_pred CCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
+.++|+|+|+|-.|..+|..|.+.|++|+|||+++
T Consensus 2 ~~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 2 NAMKIIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp CCEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred CcCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 34679999999999999999999999999999875
No 309
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=95.34 E-value=0.014 Score=50.97 Aligned_cols=34 Identities=29% Similarity=0.554 Sum_probs=30.6
Q ss_pred CCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
....|.|||+|..|...|..|+ +|++|+++|+.+
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 3578999999999999999999 999999999864
No 310
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=95.29 E-value=0.056 Score=50.97 Aligned_cols=36 Identities=19% Similarity=0.375 Sum_probs=32.6
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFL 42 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~ 42 (413)
..+++|||||..|+-+|..|++.|.+|+|+|+.+..
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 213 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHV 213 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCcc
Confidence 357999999999999999999999999999987653
No 311
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=95.26 E-value=0.013 Score=54.91 Aligned_cols=35 Identities=26% Similarity=0.199 Sum_probs=32.3
Q ss_pred CccEEEECCCHHHHHHHHHHHHc-CC-cEEEEcccCC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKR-GQ-KTLLLEQFDF 41 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~-g~-~V~lvE~~~~ 41 (413)
.++|.|||+|..|+.+|..|+++ |+ +|+++|.+..
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 46799999999999999999999 99 9999998765
No 312
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=95.24 E-value=0.019 Score=53.40 Aligned_cols=34 Identities=26% Similarity=0.419 Sum_probs=31.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCC
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDF 41 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~ 41 (413)
..|.|||+|..|..+|..|++.|++|+++|..+.
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 5799999999999999999999999999998643
No 313
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=95.22 E-value=0.02 Score=47.59 Aligned_cols=34 Identities=18% Similarity=0.323 Sum_probs=31.0
Q ss_pred CCccEEEECCCHHHHHHHHHHHHcCCcEEEEccc
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~ 39 (413)
....|+|||||-+|...|..|.+.|.+|+|++..
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 3468999999999999999999999999999864
No 314
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=95.19 E-value=0.056 Score=51.04 Aligned_cols=36 Identities=31% Similarity=0.334 Sum_probs=32.5
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFL 42 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~ 42 (413)
..+++|||||..|+-+|..|++.|.+|+|+|+.+..
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 220 (479)
T 2hqm_A 185 PKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETV 220 (479)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCcc
Confidence 357999999999999999999999999999987653
No 315
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=95.18 E-value=0.019 Score=54.04 Aligned_cols=35 Identities=29% Similarity=0.323 Sum_probs=32.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCC
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFL 42 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~ 42 (413)
.+++|||||.+|+-+|..|++.|.+|+|+|+.+..
T Consensus 167 ~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~ 201 (463)
T 2r9z_A 167 KRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRL 201 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcc
Confidence 57999999999999999999999999999987543
No 316
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=95.18 E-value=0.019 Score=54.09 Aligned_cols=34 Identities=32% Similarity=0.439 Sum_probs=31.1
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
...|.|||+|..|..+|..|+++|++|+++|++.
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 3579999999999999999999999999999764
No 317
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=95.16 E-value=0.022 Score=50.78 Aligned_cols=34 Identities=21% Similarity=0.476 Sum_probs=31.0
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCC-cEEEEcccC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQ-KTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~-~V~lvE~~~ 40 (413)
..+|+|||+|..|..+|..|++.|+ +|+|+|.+.
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 3579999999999999999999999 999999864
No 318
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=95.14 E-value=0.019 Score=50.74 Aligned_cols=32 Identities=19% Similarity=0.358 Sum_probs=29.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
++|+|||+|..|...|..|+ .|.+|+++++..
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 57999999999999999999 999999998753
No 319
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=95.11 E-value=0.025 Score=50.07 Aligned_cols=34 Identities=29% Similarity=0.407 Sum_probs=31.5
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
.++|.|||.|..|...|..|++.|++|+++|+.+
T Consensus 21 m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 54 (310)
T 3doj_A 21 MMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTL 54 (310)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 4679999999999999999999999999999864
No 320
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=95.11 E-value=0.021 Score=53.09 Aligned_cols=35 Identities=11% Similarity=0.293 Sum_probs=32.4
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDF 41 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~ 41 (413)
+.++.|||.|..|+.+|..|+++|++|+++|+++.
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 47899999999999999999999999999998754
No 321
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.10 E-value=0.058 Score=51.26 Aligned_cols=36 Identities=11% Similarity=0.248 Sum_probs=32.5
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFL 42 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~ 42 (413)
..+++|||||..|+-+|..|++.|.+|+|+|+.+..
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 211 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRI 211 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSS
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCcc
Confidence 357999999999999999999999999999987653
No 322
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=95.08 E-value=0.028 Score=53.85 Aligned_cols=35 Identities=17% Similarity=0.072 Sum_probs=31.6
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDF 41 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~ 41 (413)
..+++|||||+.|+-.|..+++.|.+|+|+++...
T Consensus 223 P~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~ 257 (542)
T 4b1b_A 223 PGKTLVVGASYVALECSGFLNSLGYDVTVAVRSIV 257 (542)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCS
T ss_pred CceEEEECCCHHHHHHHHHHHhcCCeEEEeccccc
Confidence 46799999999999999999999999999987543
No 323
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=95.04 E-value=0.02 Score=51.70 Aligned_cols=35 Identities=20% Similarity=0.405 Sum_probs=31.6
Q ss_pred CCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
..++|.|||.|..|...|..|++.|++|+++++.+
T Consensus 21 ~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 21 QSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 34689999999999999999999999999999864
No 324
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=94.99 E-value=0.014 Score=50.30 Aligned_cols=35 Identities=23% Similarity=0.395 Sum_probs=31.7
Q ss_pred CCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
....|+|||||-.|...|..|.+.|.+|+||+...
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 34679999999999999999999999999998753
No 325
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=94.94 E-value=0.027 Score=49.99 Aligned_cols=34 Identities=29% Similarity=0.511 Sum_probs=30.5
Q ss_pred CCccEEEECCCHHHHHHHHHHHHcCC--cEEEEccc
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAKRGQ--KTLLLEQF 39 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~~g~--~V~lvE~~ 39 (413)
...+|+|||+|..|.++|+.|+..|+ +|+++|..
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~ 39 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQGITDELVVIDVN 39 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecc
Confidence 34679999999999999999999987 89999975
No 326
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=94.93 E-value=0.023 Score=52.42 Aligned_cols=35 Identities=20% Similarity=0.230 Sum_probs=31.6
Q ss_pred CCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
+...|+|||.|+.|+.+|..|+++|++|+.+|-+.
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 34689999999999999999999999999999764
No 327
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=94.91 E-value=0.025 Score=50.65 Aligned_cols=34 Identities=26% Similarity=0.417 Sum_probs=31.0
Q ss_pred CCccEEEECCCHHHHHHHHHHHHcCCcEEEEccc
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~ 39 (413)
++++|.|||+|..|...|..|++.|++|+++++.
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred cCCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 3578999999999999999999999999999875
No 328
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=94.88 E-value=0.026 Score=49.74 Aligned_cols=32 Identities=41% Similarity=0.688 Sum_probs=29.6
Q ss_pred cEEEECCCHHHHHHHHHHHHcCC--cEEEEcccC
Q 015072 9 DVIVVGAGIMGSSAAYQLAKRGQ--KTLLLEQFD 40 (413)
Q Consensus 9 dvvIIGgG~aG~~~A~~L~~~g~--~V~lvE~~~ 40 (413)
+|+|||+|..|.++|+.|+..|+ +|+++|.+.
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 59999999999999999999998 999999764
No 329
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=94.88 E-value=0.018 Score=51.03 Aligned_cols=31 Identities=26% Similarity=0.359 Sum_probs=29.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHc-----C-CcEEEEcc
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKR-----G-QKTLLLEQ 38 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~-----g-~~V~lvE~ 38 (413)
++|.|||+|..|...|..|++. | ++|+++++
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 5799999999999999999999 9 99999987
No 330
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=94.87 E-value=0.025 Score=53.65 Aligned_cols=36 Identities=19% Similarity=0.288 Sum_probs=32.8
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFL 42 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~ 42 (413)
..+++|||||..|+-+|..|++.|.+|+|+++.+..
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 209 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSV 209 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcc
Confidence 357999999999999999999999999999987654
No 331
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=94.84 E-value=0.02 Score=54.11 Aligned_cols=36 Identities=28% Similarity=0.481 Sum_probs=32.8
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFL 42 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~ 42 (413)
..+++|||||.+|+.+|..|++.|.+|+|+|+.+..
T Consensus 186 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 221 (480)
T 3cgb_A 186 VEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHI 221 (480)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGT
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCch
Confidence 468999999999999999999999999999987654
No 332
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=94.83 E-value=0.025 Score=53.08 Aligned_cols=33 Identities=30% Similarity=0.368 Sum_probs=30.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
..|.|||+|..|..+|..|+++|++|+++|+.+
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 469999999999999999999999999999764
No 333
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=94.81 E-value=0.026 Score=48.04 Aligned_cols=34 Identities=24% Similarity=0.366 Sum_probs=31.4
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
..+|.|||+|..|..+|..|++.|++|+++++.+
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 4689999999999999999999999999998764
No 334
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=94.80 E-value=0.025 Score=52.78 Aligned_cols=35 Identities=31% Similarity=0.412 Sum_probs=32.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCC
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFL 42 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~ 42 (413)
.+++|||||..|+-+|..|++.|.+|+|+|+.+..
T Consensus 148 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~l 182 (437)
T 4eqs_A 148 DKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKI 182 (437)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCC
T ss_pred cEEEEECCccchhhhHHHHHhcCCcceeeeeeccc
Confidence 47999999999999999999999999999987654
No 335
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=94.76 E-value=0.088 Score=49.86 Aligned_cols=36 Identities=31% Similarity=0.482 Sum_probs=32.5
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFL 42 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~ 42 (413)
..+++|||||..|+-+|..|++.|.+|+|+++.+..
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 233 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTI 233 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEeccccc
Confidence 357999999999999999999999999999987654
No 336
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=94.75 E-value=0.031 Score=48.86 Aligned_cols=34 Identities=29% Similarity=0.335 Sum_probs=30.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCC
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDF 41 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~ 41 (413)
++|.|||.|..|...|..|++.|++|+++++.+.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPE 35 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 4599999999999999999999999999998643
No 337
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=94.72 E-value=0.036 Score=49.11 Aligned_cols=35 Identities=29% Similarity=0.596 Sum_probs=30.3
Q ss_pred CCccEEEECCCHHHHHHHHHHHHcCC--cEEEEcccC
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAKRGQ--KTLLLEQFD 40 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~~g~--~V~lvE~~~ 40 (413)
+..+|+|||+|..|.++|+.|+..|. +|.++|...
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~ 41 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANE 41 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCc
Confidence 34689999999999999999998875 899999753
No 338
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=94.69 E-value=0.032 Score=51.56 Aligned_cols=36 Identities=31% Similarity=0.442 Sum_probs=32.5
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFL 42 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~ 42 (413)
..+++|||+|..|+-+|..|++.|.+|+++++.+..
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~ 178 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDEL 178 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCcc
Confidence 457999999999999999999999999999987543
No 339
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=94.65 E-value=0.044 Score=48.58 Aligned_cols=34 Identities=24% Similarity=0.376 Sum_probs=31.1
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
..+|.|||+|..|...|..|++.|++|+++++..
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~ 63 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 63 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3679999999999999999999999999998764
No 340
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=94.65 E-value=0.033 Score=49.34 Aligned_cols=38 Identities=24% Similarity=0.427 Sum_probs=30.3
Q ss_pred CCCCCCCccEEEECCCHHHHHHHHHHHHcCC--cEEEEccc
Q 015072 1 MEFSGENFDVIVVGAGIMGSSAAYQLAKRGQ--KTLLLEQF 39 (413)
Q Consensus 1 M~~~~~~~dvvIIGgG~aG~~~A~~L~~~g~--~V~lvE~~ 39 (413)
|++| +..+|+|||+|..|.++|+.|+.+|. +|.|+|..
T Consensus 1 m~~m-~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~ 40 (317)
T 3d0o_A 1 MNKF-KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLD 40 (317)
T ss_dssp ---C-CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSC
T ss_pred CCCC-CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 5433 34689999999999999999999885 89999864
No 341
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=94.63 E-value=0.031 Score=48.20 Aligned_cols=33 Identities=18% Similarity=0.419 Sum_probs=29.9
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCc-EEEEccc
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQK-TLLLEQF 39 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~-V~lvE~~ 39 (413)
.+.|.|||+|..|...|..|++.|++ |.++++.
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~ 43 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRT 43 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCC
Confidence 46799999999999999999999998 8899874
No 342
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=94.63 E-value=0.036 Score=48.95 Aligned_cols=33 Identities=30% Similarity=0.515 Sum_probs=29.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCC-cEEEEcccC
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKRGQ-KTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~g~-~V~lvE~~~ 40 (413)
.+|+|||+|..|..+|+.|+..|+ +|+|+|...
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 469999999999999999999997 999999753
No 343
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=94.61 E-value=0.027 Score=52.94 Aligned_cols=33 Identities=15% Similarity=0.316 Sum_probs=30.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHc--CCcEEEEcccC
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKR--GQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~--g~~V~lvE~~~ 40 (413)
++|.|||.|..|+.+|..|++. |++|+++|+..
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNE 40 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 5799999999999999999999 89999999764
No 344
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=94.61 E-value=0.032 Score=49.53 Aligned_cols=32 Identities=28% Similarity=0.501 Sum_probs=29.0
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEccc
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~ 39 (413)
..+|+|||+|..|...|..|++.|++|+++ +.
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~ 50 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAGHEVILI-AR 50 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CC
T ss_pred CCcEEEECcCHHHHHHHHHHHHCCCeEEEE-Ec
Confidence 467999999999999999999999999999 54
No 345
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=94.59 E-value=0.022 Score=53.16 Aligned_cols=36 Identities=19% Similarity=0.306 Sum_probs=32.1
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFL 42 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~ 42 (413)
...|+|||.|.+|+++|..|+++|++|++.|.....
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~ 40 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTP 40 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSC
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCc
Confidence 356999999999999999999999999999986543
No 346
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=94.59 E-value=0.026 Score=52.60 Aligned_cols=32 Identities=22% Similarity=0.395 Sum_probs=29.8
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 9 DVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 9 dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
+|.|||+|..|+.+|..|++.|++|+++|++.
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 49999999999999999999999999999753
No 347
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=94.52 E-value=0.027 Score=49.51 Aligned_cols=34 Identities=24% Similarity=0.455 Sum_probs=30.8
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
.++|.|||+|..|...|..|++.|++|+++++.+
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 37 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLME 37 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 3579999999999999999999999999998753
No 348
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=94.52 E-value=0.023 Score=47.43 Aligned_cols=33 Identities=18% Similarity=0.268 Sum_probs=29.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEE-EcccC
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLL-LEQFD 40 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~g~~V~l-vE~~~ 40 (413)
++|.|||+|..|...|..|++.|++|++ ++++.
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~ 57 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAAQIPAIIANSRGP 57 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence 5799999999999999999999999999 77653
No 349
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=94.51 E-value=0.091 Score=49.56 Aligned_cols=36 Identities=31% Similarity=0.341 Sum_probs=32.4
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFL 42 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~ 42 (413)
..+++|||||..|+-+|..|++.|.+|+|+++.+..
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 222 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKV 222 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCcc
Confidence 357999999999999999999999999999987543
No 350
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=94.50 E-value=0.042 Score=48.67 Aligned_cols=34 Identities=15% Similarity=0.365 Sum_probs=30.9
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCC-cEEEEcccC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQ-KTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~-~V~lvE~~~ 40 (413)
..+|.|||+|..|.++|+.|+..|+ +|+|+|...
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 4579999999999999999999998 999999764
No 351
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=94.50 E-value=0.013 Score=49.04 Aligned_cols=33 Identities=18% Similarity=0.154 Sum_probs=30.5
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEccc
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~ 39 (413)
.++|.|||.|..|.+.|..|+++|++|+++++.
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHTTCEEEECSSG
T ss_pred CcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH
Confidence 467999999999999999999999999999874
No 352
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=94.48 E-value=0.11 Score=49.23 Aligned_cols=35 Identities=23% Similarity=0.281 Sum_probs=32.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHc---CCcEEEEcccCCC
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKR---GQKTLLLEQFDFL 42 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~---g~~V~lvE~~~~~ 42 (413)
.+++|||||..|+-+|..|++. |.+|+|+++.+..
T Consensus 192 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~ 229 (495)
T 2wpf_A 192 RRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLI 229 (495)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCcc
Confidence 5799999999999999999999 9999999987653
No 353
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=94.46 E-value=0.04 Score=49.01 Aligned_cols=34 Identities=21% Similarity=0.222 Sum_probs=30.7
Q ss_pred CccEEEECCCHHHHHHHHHHHHcC----CcEEEEcccC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRG----QKTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g----~~V~lvE~~~ 40 (413)
.++|.|||+|..|...|..|.+.| ++|+++++..
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc
Confidence 457999999999999999999999 7999998754
No 354
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=94.43 E-value=0.04 Score=48.68 Aligned_cols=32 Identities=31% Similarity=0.716 Sum_probs=29.1
Q ss_pred cEEEECCCHHHHHHHHHHHHc--CCcEEEEcccC
Q 015072 9 DVIVVGAGIMGSSAAYQLAKR--GQKTLLLEQFD 40 (413)
Q Consensus 9 dvvIIGgG~aG~~~A~~L~~~--g~~V~lvE~~~ 40 (413)
+|+|||+|..|..+|..|++. |.+|+++|.+.
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 499999999999999999985 78999999864
No 355
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=94.41 E-value=0.097 Score=50.55 Aligned_cols=35 Identities=37% Similarity=0.412 Sum_probs=32.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCC
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFL 42 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~ 42 (413)
.+++|||||..|+-+|..|++.|.+|+++++.+..
T Consensus 152 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 186 (565)
T 3ntd_A 152 EHATVVGGGFIGLEMMESLHHLGIKTTLLELADQV 186 (565)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCcc
Confidence 47999999999999999999999999999987643
No 356
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=94.40 E-value=0.046 Score=45.38 Aligned_cols=34 Identities=24% Similarity=0.224 Sum_probs=30.5
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
.+.|.|||+|..|...|..|++.|++|+++++..
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999998753
No 357
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=94.39 E-value=0.035 Score=49.66 Aligned_cols=30 Identities=30% Similarity=0.477 Sum_probs=28.7
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCcEEEEcc
Q 015072 9 DVIVVGAGIMGSSAAYQLAKRGQKTLLLEQ 38 (413)
Q Consensus 9 dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~ 38 (413)
+|.|||+|..|...|..|++.|++|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 499999999999999999999999999998
No 358
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=94.36 E-value=0.039 Score=48.95 Aligned_cols=34 Identities=18% Similarity=0.088 Sum_probs=31.3
Q ss_pred CccEEEECCCHHHHHHHHHHHHcC-CcEEEEcccC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRG-QKTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g-~~V~lvE~~~ 40 (413)
.++|.|||.|..|..+|..|++.| ++|+++++..
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 357999999999999999999999 9999999864
No 359
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=94.36 E-value=0.038 Score=50.89 Aligned_cols=34 Identities=26% Similarity=0.411 Sum_probs=31.4
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
+..|+|||.|-.|..+|..|.+.|++|++||+++
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~ 37 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDP 37 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 3569999999999999999999999999999875
No 360
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=94.33 E-value=0.047 Score=48.33 Aligned_cols=33 Identities=33% Similarity=0.439 Sum_probs=30.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCC--cEEEEcccC
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKRGQ--KTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~g~--~V~lvE~~~ 40 (413)
..|.|||.|..|.+.|..|++.|+ +|+++|+.+
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 579999999999999999999999 999999864
No 361
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=94.31 E-value=0.036 Score=49.28 Aligned_cols=34 Identities=21% Similarity=0.308 Sum_probs=31.2
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
.++|.|||.|..|...|..|++.|++|+++++.+
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 3579999999999999999999999999999864
No 362
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=94.29 E-value=0.043 Score=51.67 Aligned_cols=36 Identities=19% Similarity=0.301 Sum_probs=32.5
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFL 42 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~ 42 (413)
..+++|||||..|+-+|..|++.|.+|+|+|+.+..
T Consensus 174 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 209 (468)
T 2qae_A 174 PKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRC 209 (468)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCcc
Confidence 357999999999999999999999999999987653
No 363
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=94.28 E-value=0.042 Score=51.70 Aligned_cols=36 Identities=19% Similarity=0.325 Sum_probs=32.4
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFL 42 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~ 42 (413)
..+++|||||..|+-+|..|++.|.+|+++++.+..
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 211 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARLGSKVTVLARNTLF 211 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCcc
Confidence 357999999999999999999999999999987543
No 364
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=94.27 E-value=0.038 Score=48.26 Aligned_cols=32 Identities=25% Similarity=0.348 Sum_probs=30.1
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 9 DVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 9 dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
+|.|||.|..|...|..|++.|++|+++++.+
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRAGFDVTVWNRNP 34 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHHTCCEEEECSSG
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 59999999999999999999999999999864
No 365
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=94.27 E-value=0.043 Score=48.90 Aligned_cols=33 Identities=12% Similarity=-0.050 Sum_probs=30.1
Q ss_pred ccEEEECCCHHHHH-HHHHHHHcCCcEEEEcccC
Q 015072 8 FDVIVVGAGIMGSS-AAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGgG~aG~~-~A~~L~~~g~~V~lvE~~~ 40 (413)
..|.|||.|-+|++ +|..|.++|++|++.|+..
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred cEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 56999999999997 8999999999999999864
No 366
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=94.23 E-value=0.055 Score=47.90 Aligned_cols=34 Identities=21% Similarity=0.293 Sum_probs=30.7
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCC-cEEEEcccC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQ-KTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~-~V~lvE~~~ 40 (413)
..+|.|||+|..|.++|+.|+..|+ +|.|+|...
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 3579999999999999999999988 999999764
No 367
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=94.23 E-value=0.051 Score=49.45 Aligned_cols=34 Identities=21% Similarity=0.249 Sum_probs=31.2
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
...|+|||+|.+|+.+|..|...|.+|+++|+.+
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4679999999999999999999999999999864
No 368
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=94.16 E-value=0.045 Score=46.59 Aligned_cols=35 Identities=31% Similarity=0.410 Sum_probs=31.5
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCC-cEEEEcccCC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQ-KTLLLEQFDF 41 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~-~V~lvE~~~~ 41 (413)
..+|+|||+|-.|..+|..|++.|. +++|+|.+..
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v 66 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTV 66 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCc
Confidence 3579999999999999999999997 8999998754
No 369
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=94.16 E-value=0.043 Score=48.71 Aligned_cols=32 Identities=31% Similarity=0.524 Sum_probs=29.4
Q ss_pred cEEEECCCHHHHHHHHHHHHcCC--cEEEEcccC
Q 015072 9 DVIVVGAGIMGSSAAYQLAKRGQ--KTLLLEQFD 40 (413)
Q Consensus 9 dvvIIGgG~aG~~~A~~L~~~g~--~V~lvE~~~ 40 (413)
+|+|||+|..|.++|..|++.|+ +|+++|...
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK 35 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 49999999999999999999999 999999753
No 370
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=94.16 E-value=0.046 Score=49.19 Aligned_cols=35 Identities=26% Similarity=0.515 Sum_probs=32.0
Q ss_pred CCccEEEECCCHHHHHHHHHHHHcCC-cEEEEcccC
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAKRGQ-KTLLLEQFD 40 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~~g~-~V~lvE~~~ 40 (413)
.+.+|+|+|||.+|+.+|..|...|. +|+++|+..
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 45789999999999999999999998 999999864
No 371
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=94.15 E-value=0.04 Score=51.98 Aligned_cols=34 Identities=21% Similarity=0.329 Sum_probs=30.5
Q ss_pred CccEEEECCCHHHHHHHHHHHHc--CCcEEEEcccC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKR--GQKTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~--g~~V~lvE~~~ 40 (413)
.++|.|||.|..|+.+|..|+++ |++|+++|++.
T Consensus 9 ~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 9 VSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 35799999999999999999998 78999999753
No 372
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=94.14 E-value=0.1 Score=49.46 Aligned_cols=36 Identities=19% Similarity=0.172 Sum_probs=32.5
Q ss_pred CccEEEECCCHHHHHHHHHHHHc---CCcEEEEcccCCC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKR---GQKTLLLEQFDFL 42 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~---g~~V~lvE~~~~~ 42 (413)
..+++|||||..|+-+|..|++. |.+|+|+|+.+..
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~ 225 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMI 225 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCc
Confidence 35799999999999999999999 9999999987643
No 373
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=94.14 E-value=0.041 Score=48.66 Aligned_cols=33 Identities=18% Similarity=0.211 Sum_probs=30.3
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCC-cEEEEccc
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQ-KTLLLEQF 39 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~-~V~lvE~~ 39 (413)
.++|.|||.|..|...|..|++.|+ +|+++++.
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 4679999999999999999999999 99999985
No 374
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=94.12 E-value=0.049 Score=49.09 Aligned_cols=34 Identities=24% Similarity=0.270 Sum_probs=31.2
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
...|+|||+|.+|+.+|..|...|.+|+++|+.+
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4689999999999999999999999999999864
No 375
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=94.05 E-value=0.042 Score=51.67 Aligned_cols=35 Identities=23% Similarity=0.191 Sum_probs=31.6
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDF 41 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~ 41 (413)
..+|+|||+|.+|+-+|..|++.|.+|+|+++.+.
T Consensus 197 ~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~ 231 (464)
T 2xve_A 197 DKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTA 231 (464)
T ss_dssp TSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCC
Confidence 35799999999999999999999999999997643
No 376
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=94.02 E-value=0.058 Score=46.29 Aligned_cols=34 Identities=21% Similarity=0.249 Sum_probs=30.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHcC----CcEEEEcccCC
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKRG----QKTLLLEQFDF 41 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~g----~~V~lvE~~~~ 41 (413)
++|.|||+|..|...|..|++.| ++|+++++...
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKK 42 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCcc
Confidence 46999999999999999999999 79999998643
No 377
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=93.99 E-value=0.046 Score=48.10 Aligned_cols=33 Identities=24% Similarity=0.361 Sum_probs=30.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
++|.|||.|..|...|..|++.|++|+++++.+
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 469999999999999999999999999998763
No 378
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=93.97 E-value=0.037 Score=50.90 Aligned_cols=31 Identities=19% Similarity=0.368 Sum_probs=28.7
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 9 DVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 9 dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
+|.|||.|..|+.+|..|++ |++|+++|++.
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 49999999999999999999 99999999764
No 379
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=93.96 E-value=0.16 Score=47.82 Aligned_cols=36 Identities=28% Similarity=0.397 Sum_probs=32.5
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFL 42 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~ 42 (413)
..+++|||+|..|+-+|..|++.|.+|+++++.+..
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 215 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKF 215 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCc
Confidence 357999999999999999999999999999987643
No 380
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=93.95 E-value=0.064 Score=50.30 Aligned_cols=34 Identities=15% Similarity=0.320 Sum_probs=31.5
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
.++|.|||.|..|..+|..|+++|++|+++++.+
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~ 37 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 37 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3679999999999999999999999999999875
No 381
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=93.95 E-value=0.045 Score=47.77 Aligned_cols=32 Identities=25% Similarity=0.349 Sum_probs=29.3
Q ss_pred cEEEECCCHHHHHHHHHHHHcCC--cEEEEcccC
Q 015072 9 DVIVVGAGIMGSSAAYQLAKRGQ--KTLLLEQFD 40 (413)
Q Consensus 9 dvvIIGgG~aG~~~A~~L~~~g~--~V~lvE~~~ 40 (413)
+|+|||+|..|.++|+.|++.|+ +|+|+|..+
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 49999999999999999999988 899999754
No 382
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=93.94 E-value=0.054 Score=47.57 Aligned_cols=34 Identities=24% Similarity=0.474 Sum_probs=30.4
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCC--cEEEEcccC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQ--KTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~--~V~lvE~~~ 40 (413)
..+|.|||+|..|..+|+.|+.+|+ +|+|+|...
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 3679999999999999999999998 999999864
No 383
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=93.92 E-value=0.069 Score=46.55 Aligned_cols=32 Identities=22% Similarity=0.336 Sum_probs=30.0
Q ss_pred ccEEEECC-CHHHHHHHHHHHHcCCcEEEEccc
Q 015072 8 FDVIVVGA-GIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 8 ~dvvIIGg-G~aG~~~A~~L~~~g~~V~lvE~~ 39 (413)
+.|.|||+ |..|...|..|++.|++|+++++.
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~ 44 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIA 44 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCS
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 47999999 999999999999999999999875
No 384
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=93.92 E-value=0.065 Score=50.62 Aligned_cols=35 Identities=17% Similarity=0.252 Sum_probs=32.0
Q ss_pred CCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
+...|.|||.|..|..+|..|+++|++|+++++.+
T Consensus 9 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~ 43 (497)
T 2p4q_A 9 MSADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQ 43 (497)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 35789999999999999999999999999999864
No 385
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=93.91 E-value=0.031 Score=50.71 Aligned_cols=31 Identities=23% Similarity=0.416 Sum_probs=29.5
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCcEEEEccc
Q 015072 9 DVIVVGAGIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 9 dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~ 39 (413)
+|.|||+|..|...|..|++.|++|+++++.
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~ 47 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMN 47 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 7999999999999999999999999999875
No 386
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=93.91 E-value=0.17 Score=48.26 Aligned_cols=35 Identities=23% Similarity=0.321 Sum_probs=32.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCC
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFL 42 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~ 42 (413)
.+++|||||..|+-+|..|++.|.+|+++|+.+..
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~ 249 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPL 249 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCcc
Confidence 67999999999999999999999999999987643
No 387
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=93.91 E-value=0.055 Score=48.65 Aligned_cols=34 Identities=24% Similarity=0.337 Sum_probs=31.4
Q ss_pred CCccEEEECCCHHHHHHHHHHHHcCC-cEEEEccc
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAKRGQ-KTLLLEQF 39 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~~g~-~V~lvE~~ 39 (413)
.+.+|+|+|+|.+|..+|..|...|. +|+++|+.
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 45789999999999999999999998 89999986
No 388
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=93.90 E-value=0.054 Score=51.01 Aligned_cols=35 Identities=23% Similarity=0.404 Sum_probs=31.6
Q ss_pred CCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
.+.+|.|||.|..|...|..|+++|++|+++++.+
T Consensus 14 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~ 48 (480)
T 2zyd_A 14 SKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSR 48 (480)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred CCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 45789999999999999999999999999999763
No 389
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=93.90 E-value=0.057 Score=49.94 Aligned_cols=36 Identities=33% Similarity=0.465 Sum_probs=32.7
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFL 42 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~ 42 (413)
..+++|||+|..|+-+|..|++.|.+|+++++.+..
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~ 187 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRV 187 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCch
Confidence 457999999999999999999999999999987654
No 390
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=93.89 E-value=0.059 Score=49.61 Aligned_cols=35 Identities=26% Similarity=0.341 Sum_probs=32.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCC
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFL 42 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~ 42 (413)
.+++|||+|..|+-+|..|++.|.+|+++++.+..
T Consensus 143 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~ 177 (404)
T 3fg2_P 143 KHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRV 177 (404)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcc
Confidence 57999999999999999999999999999987654
No 391
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=93.88 E-value=0.062 Score=47.51 Aligned_cols=35 Identities=20% Similarity=0.529 Sum_probs=31.8
Q ss_pred CccEEEECC-CHHHHHHHHHHHHcCCcEEEEcccCC
Q 015072 7 NFDVIVVGA-GIMGSSAAYQLAKRGQKTLLLEQFDF 41 (413)
Q Consensus 7 ~~dvvIIGg-G~aG~~~A~~L~~~g~~V~lvE~~~~ 41 (413)
...|+|.|| |..|..++..|.++|++|+++++...
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 467999999 99999999999999999999988654
No 392
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=93.85 E-value=0.079 Score=46.00 Aligned_cols=33 Identities=15% Similarity=0.238 Sum_probs=30.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCC---cEEEEcccC
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKRGQ---KTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~g~---~V~lvE~~~ 40 (413)
+.|.|||+|..|.+.|..|.+.|+ +|+++|+++
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL 39 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH
Confidence 569999999999999999999998 999999864
No 393
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=93.85 E-value=0.17 Score=48.06 Aligned_cols=36 Identities=22% Similarity=0.349 Sum_probs=32.5
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFL 42 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~ 42 (413)
..+++|||+|..|+-+|..|++.|.+|+++|+.+..
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 217 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHV 217 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcc
Confidence 357999999999999999999999999999987653
No 394
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=93.83 E-value=0.055 Score=44.72 Aligned_cols=31 Identities=26% Similarity=0.430 Sum_probs=28.8
Q ss_pred cEEEEC-CCHHHHHHHHHHHHcCCcEEEEccc
Q 015072 9 DVIVVG-AGIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 9 dvvIIG-gG~aG~~~A~~L~~~g~~V~lvE~~ 39 (413)
+|+||| +|..|..+|..|++.|++|+++++.
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~ 33 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRR 33 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 489999 9999999999999999999999874
No 395
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=93.82 E-value=0.073 Score=46.28 Aligned_cols=34 Identities=21% Similarity=0.338 Sum_probs=31.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCC
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDF 41 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~ 41 (413)
+.|+|+|+|..|..++..|.++|++|+++.+...
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQ 37 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 4699999999999999999999999999988643
No 396
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=93.75 E-value=0.061 Score=47.62 Aligned_cols=35 Identities=29% Similarity=0.567 Sum_probs=30.9
Q ss_pred CCCccEEEECCCHHHHHHHHHHHHcCC--cEEEEccc
Q 015072 5 GENFDVIVVGAGIMGSSAAYQLAKRGQ--KTLLLEQF 39 (413)
Q Consensus 5 ~~~~dvvIIGgG~aG~~~A~~L~~~g~--~V~lvE~~ 39 (413)
.++.+|+|||+|..|.++|+.|+..+. ++.|+|..
T Consensus 3 ~~~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~ 39 (318)
T 1ez4_A 3 PNHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVV 39 (318)
T ss_dssp TTBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 345789999999999999999999876 89999974
No 397
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=93.71 E-value=0.072 Score=45.28 Aligned_cols=32 Identities=13% Similarity=0.174 Sum_probs=29.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCC----cEEEEccc
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKRGQ----KTLLLEQF 39 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~g~----~V~lvE~~ 39 (413)
++|.|||+|..|...|..|.+.|+ +|++++++
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~ 38 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLN 38 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSC
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCC
Confidence 469999999999999999999998 99999875
No 398
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=93.71 E-value=0.052 Score=50.78 Aligned_cols=34 Identities=15% Similarity=0.055 Sum_probs=31.0
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCc-EEEEcccC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQK-TLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~-V~lvE~~~ 40 (413)
..+|+|||+|.+|+-+|..|++.|.+ |+|+++.+
T Consensus 212 ~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~ 246 (447)
T 2gv8_A 212 GESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGG 246 (447)
T ss_dssp TCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred CCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCC
Confidence 35799999999999999999999998 99999864
No 399
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=93.69 E-value=0.054 Score=47.54 Aligned_cols=33 Identities=27% Similarity=0.421 Sum_probs=30.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
++|.|||+|..|...|..|++.|++|+++++..
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 38 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNP 38 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 579999999999999999999999999998753
No 400
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=93.69 E-value=0.059 Score=47.61 Aligned_cols=32 Identities=19% Similarity=0.452 Sum_probs=29.3
Q ss_pred cEEEECCCHHHHHHHHHHHHcC--CcEEEEcccC
Q 015072 9 DVIVVGAGIMGSSAAYQLAKRG--QKTLLLEQFD 40 (413)
Q Consensus 9 dvvIIGgG~aG~~~A~~L~~~g--~~V~lvE~~~ 40 (413)
+|+|||+|..|..+|..|+++| .+|+++|+..
T Consensus 3 kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 5999999999999999999999 6999999753
No 401
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=93.68 E-value=0.028 Score=47.45 Aligned_cols=35 Identities=14% Similarity=0.093 Sum_probs=30.1
Q ss_pred CCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCC
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDF 41 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~ 41 (413)
.+..++|+|+|-.|..+|..|.+.|+ |+++|+++.
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~ 42 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRGSEV-FVLAEDENV 42 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGG
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHH
Confidence 34679999999999999999999999 999998753
No 402
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=93.68 E-value=0.067 Score=47.33 Aligned_cols=34 Identities=18% Similarity=0.371 Sum_probs=30.4
Q ss_pred CccEEEECC-CHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 7 NFDVIVVGA-GIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGg-G~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
+..|+|+|| |..|..++..|.++|++|.++.+..
T Consensus 11 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 45 (318)
T 2r6j_A 11 KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPN 45 (318)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTT
T ss_pred CCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCC
Confidence 347999997 9999999999999999999998864
No 403
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=93.62 E-value=0.07 Score=46.29 Aligned_cols=31 Identities=32% Similarity=0.492 Sum_probs=28.9
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCcEEEEccc
Q 015072 9 DVIVVGAGIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 9 dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~ 39 (413)
.|.|||+|..|...|..|.+.|++|+++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 32 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQ 32 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 4999999999999999999999999999875
No 404
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=93.60 E-value=0.057 Score=49.20 Aligned_cols=34 Identities=12% Similarity=0.283 Sum_probs=30.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHcC-------CcEEEEcccCC
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKRG-------QKTLLLEQFDF 41 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~g-------~~V~lvE~~~~ 41 (413)
++|.|||+|..|...|..|++.| ++|+++++...
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 46999999999999999999999 99999998643
No 405
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=93.60 E-value=0.058 Score=46.87 Aligned_cols=33 Identities=15% Similarity=0.155 Sum_probs=30.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
+.|+|+|+|..|..++..|.++|++|+++.+..
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred CcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 579999999999999999999999999998754
No 406
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=93.58 E-value=0.066 Score=45.96 Aligned_cols=31 Identities=26% Similarity=0.397 Sum_probs=28.9
Q ss_pred cEEEECCCHHHHHHHHHHHHcC-CcEEEEccc
Q 015072 9 DVIVVGAGIMGSSAAYQLAKRG-QKTLLLEQF 39 (413)
Q Consensus 9 dvvIIGgG~aG~~~A~~L~~~g-~~V~lvE~~ 39 (413)
.|.|||+|..|...|..|++.| ++|+++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~ 33 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRG 33 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSS
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCC
Confidence 4999999999999999999999 999999875
No 407
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=93.57 E-value=0.042 Score=49.56 Aligned_cols=34 Identities=21% Similarity=0.189 Sum_probs=30.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHcC-------CcEEEEcccCC
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKRG-------QKTLLLEQFDF 41 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~g-------~~V~lvE~~~~ 41 (413)
++|.|||+|..|...|..|++.| ++|+++++...
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 57999999999999999999999 89999998643
No 408
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=93.56 E-value=0.079 Score=46.50 Aligned_cols=33 Identities=27% Similarity=0.430 Sum_probs=30.2
Q ss_pred ccEEEEC-CCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 8 FDVIVVG-AGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIG-gG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
..|.||| .|..|.+.|..|++.|++|+++++..
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 4799999 99999999999999999999998753
No 409
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=93.53 E-value=0.059 Score=44.99 Aligned_cols=34 Identities=21% Similarity=0.362 Sum_probs=30.6
Q ss_pred ccEEEECC-CHHHHHHHHHHHHcCCcEEEEcccCC
Q 015072 8 FDVIVVGA-GIMGSSAAYQLAKRGQKTLLLEQFDF 41 (413)
Q Consensus 8 ~dvvIIGg-G~aG~~~A~~L~~~g~~V~lvE~~~~ 41 (413)
+.|+|+|| |..|..++..|.++|++|+++.+...
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPE 39 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGG
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcc
Confidence 46999996 99999999999999999999998643
No 410
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=93.49 E-value=0.07 Score=52.97 Aligned_cols=33 Identities=30% Similarity=0.414 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
..|.|||+|..|..+|..|+++|++|+++|+.+
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 345 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVILKEVNE 345 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCH
Confidence 469999999999999999999999999999864
No 411
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=93.49 E-value=0.026 Score=43.54 Aligned_cols=33 Identities=18% Similarity=0.247 Sum_probs=29.8
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEccc
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~ 39 (413)
...|+|||+|..|..+|..|.+.|.+|+++++.
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~ 53 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRN 53 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCC
Confidence 357999999999999999999999999999875
No 412
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=93.48 E-value=0.072 Score=46.94 Aligned_cols=32 Identities=28% Similarity=0.497 Sum_probs=29.2
Q ss_pred cEEEECCCHHHHHHHHHHHHcCC--cEEEEcccC
Q 015072 9 DVIVVGAGIMGSSAAYQLAKRGQ--KTLLLEQFD 40 (413)
Q Consensus 9 dvvIIGgG~aG~~~A~~L~~~g~--~V~lvE~~~ 40 (413)
+|.|||+|..|.++|+.|++.|. +|+|+|...
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 35 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQDVAKEVVMVDIKD 35 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCSSEEEEECSST
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCch
Confidence 49999999999999999999987 899999754
No 413
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=93.41 E-value=0.24 Score=46.68 Aligned_cols=32 Identities=28% Similarity=0.313 Sum_probs=30.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEccc
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~ 39 (413)
.+++|||+|..|+-+|..|++.|.+|+++++.
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 219 (483)
T 3dgh_A 188 GKTLVVGAGYIGLECAGFLKGLGYEPTVMVRS 219 (483)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CcEEEECCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence 57999999999999999999999999999874
No 414
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=93.40 E-value=0.085 Score=49.77 Aligned_cols=33 Identities=15% Similarity=0.323 Sum_probs=30.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
++|.|||.|..|...|..|+++|++|+++++..
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~ 35 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 35 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 469999999999999999999999999999763
No 415
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=93.33 E-value=0.077 Score=46.44 Aligned_cols=32 Identities=31% Similarity=0.483 Sum_probs=29.6
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 9 DVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 9 dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
+|.|||.|..|...|..|++.|++|+++++..
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 49999999999999999999999999998753
No 416
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=93.24 E-value=0.059 Score=49.75 Aligned_cols=33 Identities=27% Similarity=0.387 Sum_probs=30.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
.+..|||.|..|+.+|..|+++|++|+++|.++
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~ 44 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQ 44 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CccEEEeeCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 578999999999999999999999999999875
No 417
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=93.22 E-value=0.065 Score=46.96 Aligned_cols=34 Identities=18% Similarity=0.261 Sum_probs=27.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCC
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDF 41 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~ 41 (413)
.+|.+||-|..|...|..|.++|++|+++|+.+.
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~ 39 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTAS 39 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEC-----
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 4699999999999999999999999999998654
No 418
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=93.20 E-value=0.078 Score=46.06 Aligned_cols=35 Identities=37% Similarity=0.502 Sum_probs=31.8
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCC-cEEEEcccCC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQ-KTLLLEQFDF 41 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~-~V~lvE~~~~ 41 (413)
...|+|||+|-.|..+|..|++.|. +++|+|.+..
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~V 71 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKV 71 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC
T ss_pred CCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCcc
Confidence 4789999999999999999999997 8999998754
No 419
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=93.16 E-value=0.091 Score=49.46 Aligned_cols=33 Identities=36% Similarity=0.588 Sum_probs=30.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
++|.|||+|..|...|..|+++|++|+++++..
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~ 34 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKVAVFNRTY 34 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 369999999999999999999999999999753
No 420
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=93.14 E-value=0.098 Score=43.30 Aligned_cols=32 Identities=22% Similarity=0.343 Sum_probs=29.1
Q ss_pred cEEEECC-CHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 9 DVIVVGA-GIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 9 dvvIIGg-G~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
.|+|+|| |..|..++..|.++|++|+++.+..
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 3999996 9999999999999999999998853
No 421
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=93.12 E-value=0.05 Score=50.11 Aligned_cols=30 Identities=23% Similarity=0.231 Sum_probs=27.9
Q ss_pred ccEEEECCCHHHHHHHHHHHH-cCCcEEEEc
Q 015072 8 FDVIVVGAGIMGSSAAYQLAK-RGQKTLLLE 37 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~-~g~~V~lvE 37 (413)
++|+|||+|..|...|..|++ .|++|++++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 469999999999999999998 499999998
No 422
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=93.11 E-value=0.099 Score=46.28 Aligned_cols=34 Identities=35% Similarity=0.613 Sum_probs=30.5
Q ss_pred CCccEEEECCCHHHHHHHHHHHHcCC--cEEEEccc
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAKRGQ--KTLLLEQF 39 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~~g~--~V~lvE~~ 39 (413)
...+|+|||+|..|.++|+.|+..|. ++.|+|..
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~ 43 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 34689999999999999999999987 89999974
No 423
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=93.08 E-value=0.1 Score=46.14 Aligned_cols=34 Identities=18% Similarity=0.324 Sum_probs=30.5
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCC--cEEEEcccC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQ--KTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~--~V~lvE~~~ 40 (413)
..+|.|||+|..|.++|+.|+.+|+ +|+|+|...
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~ 56 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMKDLADEVALVDVME 56 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCH
Confidence 4689999999999999999999997 899999643
No 424
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=93.05 E-value=0.11 Score=46.07 Aligned_cols=36 Identities=25% Similarity=0.384 Sum_probs=32.2
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCC-cEEEEcccCCC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQ-KTLLLEQFDFL 42 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~-~V~lvE~~~~~ 42 (413)
...|+|||+|-.|..+|..|++.|. +++|+|.+...
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~Ve 70 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVS 70 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCEec
Confidence 4689999999999999999999997 89999987543
No 425
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=93.00 E-value=0.24 Score=46.40 Aligned_cols=35 Identities=20% Similarity=0.204 Sum_probs=32.1
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDF 41 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~ 41 (413)
..+++|||+|..|+-+|..|++.|.+|+++++.+.
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~ 204 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKE 204 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCc
Confidence 45799999999999999999999999999998764
No 426
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=92.98 E-value=0.095 Score=50.91 Aligned_cols=35 Identities=26% Similarity=0.430 Sum_probs=32.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCC
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFL 42 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~ 42 (413)
.+++|||+|..|+-+|..|++.|.+|+++++.+..
T Consensus 188 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 222 (588)
T 3ics_A 188 RHATVIGGGFIGVEMVENLRERGIEVTLVEMANQV 222 (588)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCcc
Confidence 57999999999999999999999999999987643
No 427
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=92.94 E-value=0.069 Score=52.97 Aligned_cols=33 Identities=39% Similarity=0.598 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
..|.|||+|..|..+|..|+++|++|+++|+.+
T Consensus 315 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 347 (715)
T 1wdk_A 315 KQAAVLGAGIMGGGIAYQSASKGTPILMKDINE 347 (715)
T ss_dssp SSEEEECCHHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CEEEEECCChhhHHHHHHHHhCCCEEEEEECCH
Confidence 469999999999999999999999999999864
No 428
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=92.93 E-value=0.12 Score=44.33 Aligned_cols=34 Identities=24% Similarity=0.378 Sum_probs=31.0
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
...++|||+|-+|.++|+.|++.|.+|+|+.|..
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999998864
No 429
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=92.92 E-value=0.12 Score=44.71 Aligned_cols=33 Identities=12% Similarity=0.214 Sum_probs=30.2
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEccc
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~ 39 (413)
...++|+|+|-+|..+|..|++.|.+|+++++.
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~ 151 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSLDCAVTITNRT 151 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCEEEEEECC
Confidence 357999999999999999999999999999875
No 430
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=92.92 E-value=0.14 Score=43.14 Aligned_cols=39 Identities=23% Similarity=0.295 Sum_probs=31.8
Q ss_pred CCCCCCCccEEEECC-CHHHHHHHHHHHHcCCcEEEEccc
Q 015072 1 MEFSGENFDVIVVGA-GIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 1 M~~~~~~~dvvIIGg-G~aG~~~A~~L~~~g~~V~lvE~~ 39 (413)
|.+......++|.|| |-.|..+|..|+++|++|+++++.
T Consensus 1 M~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~ 40 (244)
T 3d3w_A 1 MELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRT 40 (244)
T ss_dssp CCCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CccccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 443334456899988 799999999999999999999875
No 431
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=92.90 E-value=0.11 Score=43.26 Aligned_cols=32 Identities=28% Similarity=0.447 Sum_probs=29.3
Q ss_pred cEEEECC-CHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 9 DVIVVGA-GIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 9 dvvIIGg-G~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
.|+|+|| |..|..++..|.++|++|+++.+..
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecc
Confidence 3999998 9999999999999999999998753
No 432
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=92.88 E-value=0.12 Score=48.62 Aligned_cols=34 Identities=24% Similarity=0.390 Sum_probs=31.1
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
+.+|.|||.|..|...|..|+++|++|+++++..
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~ 38 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGYTVAIYNRTT 38 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 3679999999999999999999999999999753
No 433
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=92.87 E-value=0.1 Score=47.16 Aligned_cols=33 Identities=30% Similarity=0.449 Sum_probs=30.4
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCcEEEEcccCC
Q 015072 9 DVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDF 41 (413)
Q Consensus 9 dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~ 41 (413)
.|+|||||..|..+|+.+.+.|++|+++|.++.
T Consensus 3 ~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 3 TICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 599999999999999999999999999997654
No 434
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=92.87 E-value=0.1 Score=45.60 Aligned_cols=32 Identities=28% Similarity=0.498 Sum_probs=29.3
Q ss_pred cEEEECC-CHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 9 DVIVVGA-GIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 9 dvvIIGg-G~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
+|+|.|| |..|..++.+|.++|++|+++.|.+
T Consensus 2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~ 34 (298)
T 4b4o_A 2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKP 34 (298)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 4999998 9999999999999999999997753
No 435
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=92.83 E-value=0.11 Score=43.58 Aligned_cols=34 Identities=24% Similarity=0.436 Sum_probs=30.9
Q ss_pred CccEEEECC-CHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 7 NFDVIVVGA-GIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGg-G~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
.+.|+|.|| |..|..++..|.++|++|+++.+..
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 467999998 9999999999999999999998864
No 436
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=92.81 E-value=0.13 Score=45.95 Aligned_cols=33 Identities=30% Similarity=0.430 Sum_probs=29.5
Q ss_pred CccEEEECC-CHHHHHHHHHHHHcCC--cEEEEccc
Q 015072 7 NFDVIVVGA-GIMGSSAAYQLAKRGQ--KTLLLEQF 39 (413)
Q Consensus 7 ~~dvvIIGg-G~aG~~~A~~L~~~g~--~V~lvE~~ 39 (413)
..+|+|||+ |..|.++|+.|+.+|. +|+|+|..
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~ 43 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPF 43 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSC
T ss_pred CCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 467999998 9999999999999985 89999975
No 437
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=92.79 E-value=0.13 Score=41.87 Aligned_cols=34 Identities=21% Similarity=0.246 Sum_probs=30.7
Q ss_pred ccEEEECC-CHHHHHHHHHHHHcCCcEEEEcccCC
Q 015072 8 FDVIVVGA-GIMGSSAAYQLAKRGQKTLLLEQFDF 41 (413)
Q Consensus 8 ~dvvIIGg-G~aG~~~A~~L~~~g~~V~lvE~~~~ 41 (413)
+.|+|+|| |..|..++..|.++|++|+++.+...
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~ 38 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSS 38 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChh
Confidence 46999998 99999999999999999999988643
No 438
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=92.79 E-value=0.13 Score=45.62 Aligned_cols=34 Identities=21% Similarity=0.372 Sum_probs=30.5
Q ss_pred CCccEEEECCCHHHHHHHHHHHHcCC--cEEEEccc
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAKRGQ--KTLLLEQF 39 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~~g~--~V~lvE~~ 39 (413)
...+|.|||+|..|.++|+.|+.+|. +++|+|..
T Consensus 18 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~ 53 (331)
T 4aj2_A 18 PQNKITVVGVGAVGMACAISILMKDLADELALVDVI 53 (331)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCC
Confidence 34689999999999999999999987 89999965
No 439
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=92.72 E-value=0.08 Score=47.15 Aligned_cols=33 Identities=33% Similarity=0.356 Sum_probs=29.3
Q ss_pred CccEEEECC-CHHHHHHHHHHHHcCC-------cEEEEccc
Q 015072 7 NFDVIVVGA-GIMGSSAAYQLAKRGQ-------KTLLLEQF 39 (413)
Q Consensus 7 ~~dvvIIGg-G~aG~~~A~~L~~~g~-------~V~lvE~~ 39 (413)
.++|+|+|| |..|..++..|.++|+ +|.++|..
T Consensus 4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~ 44 (327)
T 1y7t_A 4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIP 44 (327)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCG
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCC
Confidence 357999998 9999999999999886 89999874
No 440
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=92.71 E-value=0.12 Score=44.91 Aligned_cols=32 Identities=34% Similarity=0.480 Sum_probs=29.2
Q ss_pred cEEEECCCHHHHHHHHHHHHcCC--cEEEEcccC
Q 015072 9 DVIVVGAGIMGSSAAYQLAKRGQ--KTLLLEQFD 40 (413)
Q Consensus 9 dvvIIGgG~aG~~~A~~L~~~g~--~V~lvE~~~ 40 (413)
.|.|||+|..|.+.|..|++.|+ +|+++|+..
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 36 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 59999999999999999999998 899998753
No 441
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=92.68 E-value=0.1 Score=44.80 Aligned_cols=30 Identities=23% Similarity=0.295 Sum_probs=27.8
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCcEEEEcc
Q 015072 9 DVIVVGAGIMGSSAAYQLAKRGQKTLLLEQ 38 (413)
Q Consensus 9 dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~ 38 (413)
.|.|||+|..|...|..|++.|++|+++++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 499999999999999999999999999765
No 442
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=92.64 E-value=0.15 Score=43.01 Aligned_cols=39 Identities=21% Similarity=0.316 Sum_probs=30.9
Q ss_pred CCCCCCCccEEEECC-CHHHHHHHHHHHHcCCcEEEEccc
Q 015072 1 MEFSGENFDVIVVGA-GIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 1 M~~~~~~~dvvIIGg-G~aG~~~A~~L~~~g~~V~lvE~~ 39 (413)
|....+...++|.|| |-.|..+|..|+++|++|+++++.
T Consensus 1 m~~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~ 40 (244)
T 1cyd_A 1 MKLNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRT 40 (244)
T ss_dssp --CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 433334456899988 899999999999999999999875
No 443
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=92.59 E-value=0.11 Score=47.58 Aligned_cols=34 Identities=24% Similarity=0.284 Sum_probs=30.8
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
...|+|||+|.+|+.+|..|...|.+|+++|+..
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 3579999999999999999999999999999764
No 444
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=92.53 E-value=0.11 Score=48.78 Aligned_cols=36 Identities=31% Similarity=0.443 Sum_probs=32.4
Q ss_pred CccEEEECCCHHHHHHHHHHHHc-CCcEEEEcccCCC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKR-GQKTLLLEQFDFL 42 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~-g~~V~lvE~~~~~ 42 (413)
..+++|||+|..|+-+|..|++. |.+|+++++.+..
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~ 195 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQI 195 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcc
Confidence 35799999999999999999999 9999999987543
No 445
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=92.49 E-value=0.1 Score=44.72 Aligned_cols=32 Identities=16% Similarity=0.272 Sum_probs=29.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEccc
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~ 39 (413)
++|.|||.|..|...|..|.+.|++|.++++.
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~ 35 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSS 35 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSS
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEECCC
Confidence 46999999999999999999999999999875
No 446
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=92.44 E-value=0.12 Score=44.06 Aligned_cols=35 Identities=31% Similarity=0.493 Sum_probs=31.5
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCC-cEEEEcccCC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQ-KTLLLEQFDF 41 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~-~V~lvE~~~~ 41 (413)
...|+|||+|-.|..+|..|++.|. +++|+|.+..
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~v 63 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDV 63 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCBC
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCCc
Confidence 4679999999999999999999997 8999998754
No 447
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=92.39 E-value=0.16 Score=45.16 Aligned_cols=34 Identities=32% Similarity=0.307 Sum_probs=30.5
Q ss_pred CCccEEEECC-CHHHHHHHHHHHHcCCcEEEEccc
Q 015072 6 ENFDVIVVGA-GIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 6 ~~~dvvIIGg-G~aG~~~A~~L~~~g~~V~lvE~~ 39 (413)
+...|+|.|| |..|..++..|.++|++|+++.+.
T Consensus 10 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~ 44 (342)
T 1y1p_A 10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARS 44 (342)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3467999998 999999999999999999999875
No 448
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=92.37 E-value=0.11 Score=45.27 Aligned_cols=31 Identities=32% Similarity=0.367 Sum_probs=28.5
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 9 DVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 9 dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
.|.|||+|..|...|..|++ |++|+++++..
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~ 33 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTF 33 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSCEEEECSST
T ss_pred eEEEEcccHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 59999999999999999999 99999998753
No 449
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=92.35 E-value=0.092 Score=52.03 Aligned_cols=33 Identities=30% Similarity=0.368 Sum_probs=30.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
..|.|||+|.+|..+|..++..|++|+|+|..+
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~ 349 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARVGISVVAVESDP 349 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred cEEEEEcccHHHHHHHHHHHhCCCchhcccchH
Confidence 579999999999999999999999999999764
No 450
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=92.34 E-value=0.16 Score=45.45 Aligned_cols=32 Identities=22% Similarity=0.262 Sum_probs=29.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEccc
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~ 39 (413)
..|.|||.|..|.+.|..|++.|++|+++++.
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~ 48 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSGVDVTVGLRS 48 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECCT
T ss_pred CEEEEECchHHHHHHHHHHHHCcCEEEEEECC
Confidence 46999999999999999999999999999875
No 451
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=92.34 E-value=0.12 Score=44.98 Aligned_cols=32 Identities=25% Similarity=0.349 Sum_probs=28.3
Q ss_pred cEEEECCCHHHHHHHHHHHHcCC--cEEEEcccC
Q 015072 9 DVIVVGAGIMGSSAAYQLAKRGQ--KTLLLEQFD 40 (413)
Q Consensus 9 dvvIIGgG~aG~~~A~~L~~~g~--~V~lvE~~~ 40 (413)
+|.|||+|-.|.++|+.|..++. ++.|+|...
T Consensus 2 KV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~ 35 (294)
T 2x0j_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence 49999999999999999998875 799999653
No 452
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=92.33 E-value=0.083 Score=46.19 Aligned_cols=32 Identities=31% Similarity=0.521 Sum_probs=29.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
+.|.|||+|..|...|..|++.|++|++++ ..
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~ 35 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGHQLHVTT-IG 35 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CH
Confidence 469999999999999999999999999998 53
No 453
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=92.20 E-value=0.12 Score=48.35 Aligned_cols=33 Identities=21% Similarity=0.289 Sum_probs=30.8
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEccc
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~ 39 (413)
...|+|||+|-+|...+..|.+.|.+|+|++..
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 467999999999999999999999999999975
No 454
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=92.16 E-value=0.14 Score=47.12 Aligned_cols=34 Identities=18% Similarity=0.181 Sum_probs=31.0
Q ss_pred CCCCccEEEECCCHHHHHHHHHHHHcCCcEEEEc
Q 015072 4 SGENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLE 37 (413)
Q Consensus 4 ~~~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE 37 (413)
|++...|+|+|+|..|..++..+.+.|++|.++|
T Consensus 21 mm~~~~I~ilGgG~lg~~l~~aa~~lG~~v~~~d 54 (403)
T 3k5i_A 21 MWNSRKVGVLGGGQLGRMLVESANRLNIQVNVLD 54 (403)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEE
Confidence 4445789999999999999999999999999999
No 455
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=92.13 E-value=0.19 Score=43.07 Aligned_cols=40 Identities=23% Similarity=0.326 Sum_probs=31.4
Q ss_pred CCCCCCCccEEEECC-CH--HHHHHHHHHHHcCCcEEEEcccC
Q 015072 1 MEFSGENFDVIVVGA-GI--MGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 1 M~~~~~~~dvvIIGg-G~--aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
|.+......++|.|| |. .|..+|..|+++|.+|+++++..
T Consensus 1 M~~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~ 43 (266)
T 3oig_A 1 MNFSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGE 43 (266)
T ss_dssp CCSCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CccccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCch
Confidence 543334456889997 45 89999999999999999997753
No 456
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=92.10 E-value=0.11 Score=46.36 Aligned_cols=33 Identities=30% Similarity=0.306 Sum_probs=29.5
Q ss_pred CccEEEECC-CHHHHHHHHHHHHcCC-------cEEEEccc
Q 015072 7 NFDVIVVGA-GIMGSSAAYQLAKRGQ-------KTLLLEQF 39 (413)
Q Consensus 7 ~~dvvIIGg-G~aG~~~A~~L~~~g~-------~V~lvE~~ 39 (413)
.++|+|||| |..|.++++.|...|. +|.++|..
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~ 45 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIP 45 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCS
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCC
Confidence 468999998 9999999999999885 79999875
No 457
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=92.07 E-value=0.16 Score=45.06 Aligned_cols=35 Identities=34% Similarity=0.585 Sum_probs=30.6
Q ss_pred CCCccEEEECCCHHHHHHHHHHHHcCC--cEEEEccc
Q 015072 5 GENFDVIVVGAGIMGSSAAYQLAKRGQ--KTLLLEQF 39 (413)
Q Consensus 5 ~~~~dvvIIGgG~aG~~~A~~L~~~g~--~V~lvE~~ 39 (413)
.++.+|+|||+|..|.++|+.|+..++ ++.|+|..
T Consensus 7 ~~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~ 43 (326)
T 2zqz_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 345789999999999999999998876 89999974
No 458
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=92.07 E-value=0.14 Score=46.29 Aligned_cols=33 Identities=21% Similarity=0.371 Sum_probs=30.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
..|+|+|+|.+|..++..|+..|.+|+++++.+
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 579999999999999999999999999998753
No 459
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=92.06 E-value=0.15 Score=48.09 Aligned_cols=36 Identities=31% Similarity=0.452 Sum_probs=32.4
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFL 42 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~ 42 (413)
..+++|||+|..|+-+|..|++.|.+|+++++.+..
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~ 226 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLI 226 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCcc
Confidence 357999999999999999999999999999987643
No 460
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=92.06 E-value=0.17 Score=46.16 Aligned_cols=34 Identities=21% Similarity=0.272 Sum_probs=30.8
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
...|+|||+|.+|+.+|..|...|.+|+++|+.+
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4579999999999999999999999999999764
No 461
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=91.92 E-value=0.12 Score=44.58 Aligned_cols=34 Identities=24% Similarity=0.267 Sum_probs=30.7
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
...++|+|+|-+|..+|+.|++.|.+|+|+++..
T Consensus 119 ~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~ 152 (272)
T 1p77_A 119 NQHVLILGAGGATKGVLLPLLQAQQNIVLANRTF 152 (272)
T ss_dssp TCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 3579999999999999999999999999998763
No 462
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=91.92 E-value=0.17 Score=44.58 Aligned_cols=32 Identities=31% Similarity=0.488 Sum_probs=28.7
Q ss_pred cEEEECCCHHHHHHHHHHHHcCC-cEEEEcccC
Q 015072 9 DVIVVGAGIMGSSAAYQLAKRGQ-KTLLLEQFD 40 (413)
Q Consensus 9 dvvIIGgG~aG~~~A~~L~~~g~-~V~lvE~~~ 40 (413)
+|.|||+|..|.++|+.|+..++ +|.|+|...
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~ 33 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTP 33 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSST
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCCh
Confidence 48999999999999999999888 699999753
No 463
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=91.92 E-value=0.16 Score=44.42 Aligned_cols=34 Identities=15% Similarity=0.196 Sum_probs=30.5
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCC-cEEEEcccC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQ-KTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~-~V~lvE~~~ 40 (413)
...++|||+|-+|..+|..|++.|. +|+|+++..
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~ 175 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLSTAAERIDMANRTV 175 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSH
T ss_pred CCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 3579999999999999999999997 999998763
No 464
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=91.89 E-value=0.2 Score=44.69 Aligned_cols=35 Identities=23% Similarity=0.447 Sum_probs=30.8
Q ss_pred CCccEEEECC-CHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 6 ENFDVIVVGA-GIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 6 ~~~dvvIIGg-G~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
+.+.|+|.|| |..|..++..|+++|++|+++++..
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~ 39 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLV 39 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCS
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCC
Confidence 3467999985 9999999999999999999998754
No 465
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=91.87 E-value=0.21 Score=42.79 Aligned_cols=40 Identities=25% Similarity=0.186 Sum_probs=31.3
Q ss_pred CCCCCCCccEEEECC-CHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 1 MEFSGENFDVIVVGA-GIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 1 M~~~~~~~dvvIIGg-G~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
|..|.....++|.|| |-.|..+|..|+++|++|+++++..
T Consensus 1 M~~m~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 41 (267)
T 2gdz_A 1 MAHMVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNL 41 (267)
T ss_dssp -CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCcccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCH
Confidence 554444456888886 6789999999999999999998753
No 466
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=91.87 E-value=0.17 Score=45.86 Aligned_cols=34 Identities=24% Similarity=0.392 Sum_probs=30.7
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
...|+|+|+|..|..+|..|+..|.+|+++|+..
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 3579999999999999999999999999998753
No 467
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=91.84 E-value=0.16 Score=43.94 Aligned_cols=33 Identities=30% Similarity=0.508 Sum_probs=30.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
..++|||+|-+|..+|..|.+.|.+|+++++..
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~ 162 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKEGAKVFLWNRTK 162 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSH
T ss_pred CEEEEECchHHHHHHHHHHHHcCCEEEEEECCH
Confidence 579999999999999999999999999998763
No 468
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=91.81 E-value=0.13 Score=45.51 Aligned_cols=32 Identities=25% Similarity=0.347 Sum_probs=28.9
Q ss_pred cEEEECC-CHHHHHHHHHHHHcC--CcEEEEcccC
Q 015072 9 DVIVVGA-GIMGSSAAYQLAKRG--QKTLLLEQFD 40 (413)
Q Consensus 9 dvvIIGg-G~aG~~~A~~L~~~g--~~V~lvE~~~ 40 (413)
+|+|||+ |..|.++|+.|++.| .+|.++|...
T Consensus 2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~ 36 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH 36 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc
Confidence 5999998 999999999999988 6899999764
No 469
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=91.80 E-value=0.16 Score=44.30 Aligned_cols=32 Identities=19% Similarity=0.324 Sum_probs=28.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHc--CCcEEEEccc
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKR--GQKTLLLEQF 39 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~--g~~V~lvE~~ 39 (413)
+.|.|||+|..|...|..|++. |.+|+++|+.
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~ 40 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRS 40 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSS
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCC
Confidence 5699999999999999999998 5799999875
No 470
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=91.73 E-value=0.44 Score=45.16 Aligned_cols=34 Identities=29% Similarity=0.440 Sum_probs=28.8
Q ss_pred cEEEECCCHHHHHHHHHHHHc--------------CCcEEEEcccCCC
Q 015072 9 DVIVVGAGIMGSSAAYQLAKR--------------GQKTLLLEQFDFL 42 (413)
Q Consensus 9 dvvIIGgG~aG~~~A~~L~~~--------------g~~V~lvE~~~~~ 42 (413)
.++|||||++|+-+|..|++. ..+|+|||+.+..
T Consensus 219 ~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~i 266 (502)
T 4g6h_A 219 SIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIV 266 (502)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSS
T ss_pred ceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEecccccc
Confidence 599999999999999988753 3689999998654
No 471
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=91.63 E-value=0.24 Score=45.03 Aligned_cols=36 Identities=22% Similarity=0.305 Sum_probs=32.0
Q ss_pred CCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCC
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDF 41 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~ 41 (413)
....|+|||+|-.|..++..+.+.|++|+++|..+.
T Consensus 11 ~~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~ 46 (377)
T 3orq_A 11 FGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSED 46 (377)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 456799999999999999999999999999987543
No 472
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=91.43 E-value=0.25 Score=44.53 Aligned_cols=34 Identities=26% Similarity=0.649 Sum_probs=30.0
Q ss_pred CccEEEECC-CHHHHHHHHHHHH--cCCcEEEEcccC
Q 015072 7 NFDVIVVGA-GIMGSSAAYQLAK--RGQKTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGg-G~aG~~~A~~L~~--~g~~V~lvE~~~ 40 (413)
...|+|.|| |..|..++..|.+ .|++|+++++..
T Consensus 10 ~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~ 46 (362)
T 3sxp_A 10 NQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFR 46 (362)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCC
Confidence 467999976 9999999999999 899999998754
No 473
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=91.34 E-value=0.27 Score=45.37 Aligned_cols=35 Identities=17% Similarity=0.229 Sum_probs=31.1
Q ss_pred CCccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 6 ENFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 6 ~~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
....|+|||+|..|..++..+.+.|++|.++|..+
T Consensus 34 ~~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~ 68 (419)
T 4e4t_A 34 PGAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDP 68 (419)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 34679999999999999999999999999998653
No 474
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=91.33 E-value=0.23 Score=42.25 Aligned_cols=32 Identities=28% Similarity=0.399 Sum_probs=29.8
Q ss_pred cEEEECCCHHHHHHHHHHHHcCC-cEEEEcccC
Q 015072 9 DVIVVGAGIMGSSAAYQLAKRGQ-KTLLLEQFD 40 (413)
Q Consensus 9 dvvIIGgG~aG~~~A~~L~~~g~-~V~lvE~~~ 40 (413)
.++|||+|-+|.++++.|.+.|. +|+|+++..
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~ 142 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTI 142 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCH
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 79999999999999999999998 999998864
No 475
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=91.32 E-value=0.19 Score=45.21 Aligned_cols=35 Identities=26% Similarity=0.502 Sum_probs=31.5
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCC-cEEEEcccCC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQ-KTLLLEQFDF 41 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~-~V~lvE~~~~ 41 (413)
...|+|||+|-.|..+|..|++.|. +++|+|.+..
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~V 153 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQI 153 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCBC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCcC
Confidence 4679999999999999999999997 8999998654
No 476
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=91.27 E-value=0.18 Score=43.53 Aligned_cols=35 Identities=17% Similarity=0.139 Sum_probs=31.2
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCC-cEEEEcccCC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQ-KTLLLEQFDF 41 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~-~V~lvE~~~~ 41 (413)
...++|||+|-+|..+|+.|++.|. +|+|+.|...
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~ 152 (277)
T 3don_A 117 DAYILILGAGGASKGIANELYKIVRPTLTVANRTMS 152 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGG
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHH
Confidence 3579999999999999999999998 8999988753
No 477
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=91.25 E-value=0.14 Score=45.46 Aligned_cols=35 Identities=23% Similarity=0.359 Sum_probs=29.8
Q ss_pred CCccEEEEC-CCHHHHHHHHHHHHcC--CcEEEEcccC
Q 015072 6 ENFDVIVVG-AGIMGSSAAYQLAKRG--QKTLLLEQFD 40 (413)
Q Consensus 6 ~~~dvvIIG-gG~aG~~~A~~L~~~g--~~V~lvE~~~ 40 (413)
+.++|+||| +|..|.++++.|+++| .+|.++|...
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~ 44 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVN 44 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSS
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence 346899999 7999999999999988 6899998643
No 478
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=90.58 E-value=0.038 Score=45.32 Aligned_cols=34 Identities=18% Similarity=0.223 Sum_probs=30.5
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
.+.|.|||+|..|...|..|.+.|++|+++++..
T Consensus 19 ~~~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 52 (201)
T 2yjz_A 19 QGVVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNP 52 (201)
Confidence 3569999999999999999999999999998754
No 479
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=91.18 E-value=0.22 Score=45.22 Aligned_cols=33 Identities=33% Similarity=0.404 Sum_probs=30.3
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEccc
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~ 39 (413)
...|+|||+|.+|..+|..|+..|.+|+++|+.
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~ 200 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGMGATVTVLDIN 200 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 457999999999999999999999999999875
No 480
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=91.13 E-value=0.23 Score=47.52 Aligned_cols=36 Identities=25% Similarity=0.384 Sum_probs=32.2
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCC-cEEEEcccCCC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQ-KTLLLEQFDFL 42 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~-~V~lvE~~~~~ 42 (413)
...|+|||+|-.|+.+|..|++.|. +++|+|.+...
T Consensus 326 ~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~Ve 362 (615)
T 4gsl_A 326 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVS 362 (615)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCCc
Confidence 4689999999999999999999997 89999987543
No 481
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=91.11 E-value=0.23 Score=44.44 Aligned_cols=36 Identities=17% Similarity=0.262 Sum_probs=30.5
Q ss_pred CCccEEEECC-CHHHHHHHHHHHHcCCcEEEEcccCC
Q 015072 6 ENFDVIVVGA-GIMGSSAAYQLAKRGQKTLLLEQFDF 41 (413)
Q Consensus 6 ~~~dvvIIGg-G~aG~~~A~~L~~~g~~V~lvE~~~~ 41 (413)
+...|+|.|| |..|..++..|.++|++|+++++...
T Consensus 18 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 54 (347)
T 4id9_A 18 GSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPS 54 (347)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCC
Confidence 3467999998 99999999999999999999988643
No 482
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=91.11 E-value=0.3 Score=40.45 Aligned_cols=32 Identities=16% Similarity=0.166 Sum_probs=28.7
Q ss_pred cEEEECC-CHHHHHHHHHHH-HcCCcEEEEcccC
Q 015072 9 DVIVVGA-GIMGSSAAYQLA-KRGQKTLLLEQFD 40 (413)
Q Consensus 9 dvvIIGg-G~aG~~~A~~L~-~~g~~V~lvE~~~ 40 (413)
.|+|+|| |..|..+|..|+ +.|++|+++.+..
T Consensus 7 ~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~ 40 (221)
T 3r6d_A 7 YITILGAAGQIAQXLTATLLTYTDMHITLYGRQL 40 (221)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSH
T ss_pred EEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCc
Confidence 3999995 999999999999 8999999998763
No 483
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=91.10 E-value=0.23 Score=41.86 Aligned_cols=41 Identities=27% Similarity=0.346 Sum_probs=30.0
Q ss_pred CCCCCCCccEEEECC-CHHHHHHHHHHHHcCCcEEEEcccCC
Q 015072 1 MEFSGENFDVIVVGA-GIMGSSAAYQLAKRGQKTLLLEQFDF 41 (413)
Q Consensus 1 M~~~~~~~dvvIIGg-G~aG~~~A~~L~~~g~~V~lvE~~~~ 41 (413)
|..+.+...++|.|| |-.|..+|..|+++|++|+++++...
T Consensus 1 M~~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~ 42 (241)
T 1dhr_A 1 MAASGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVEN 42 (241)
T ss_dssp -----CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCC
T ss_pred CCccCCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChh
Confidence 443444456888886 57799999999999999999988653
No 484
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=90.97 E-value=0.2 Score=44.01 Aligned_cols=33 Identities=24% Similarity=0.298 Sum_probs=29.8
Q ss_pred CccEEEECCC-HHHHHHHHHHHHcCCcEEEEccc
Q 015072 7 NFDVIVVGAG-IMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 7 ~~dvvIIGgG-~aG~~~A~~L~~~g~~V~lvE~~ 39 (413)
...++|||+| +.|..+|..|...|..|+++++.
T Consensus 177 gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~ 210 (320)
T 1edz_A 177 GKKCIVINRSEIVGRPLAALLANDGATVYSVDVN 210 (320)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred CCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCc
Confidence 4689999999 67999999999999999999875
No 485
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=90.89 E-value=0.25 Score=43.28 Aligned_cols=33 Identities=27% Similarity=0.429 Sum_probs=29.9
Q ss_pred ccEEEECC-CHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 8 FDVIVVGA-GIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGg-G~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
..|+|+|| |..|..++..|.++|++|.++.+..
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 38 (308)
T 1qyc_A 5 SRILLIGATGYIGRHVAKASLDLGHPTFLLVRES 38 (308)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCC
T ss_pred CEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCc
Confidence 45999998 9999999999999999999998864
No 486
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=90.88 E-value=0.31 Score=44.47 Aligned_cols=34 Identities=21% Similarity=0.333 Sum_probs=31.1
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
...|+|||+|..|..+|..+.+.|++|+++|..+
T Consensus 14 ~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~ 47 (389)
T 3q2o_A 14 GKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTK 47 (389)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCEEEEEESST
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCC
Confidence 4579999999999999999999999999998754
No 487
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=90.87 E-value=0.16 Score=50.73 Aligned_cols=33 Identities=21% Similarity=0.316 Sum_probs=30.8
Q ss_pred ccEEEEC--CCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 8 FDVIVVG--AGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIG--gG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
.+|+||| ||.+|+-+|..|++.|.+|+|+++.+
T Consensus 529 k~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 529 KRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 5799999 99999999999999999999999875
No 488
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=90.85 E-value=0.34 Score=41.41 Aligned_cols=39 Identities=21% Similarity=0.307 Sum_probs=30.5
Q ss_pred CCCCCCCccEEEECC-CHHHHHHHHHHHHcCCcEEEEccc
Q 015072 1 MEFSGENFDVIVVGA-GIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 1 M~~~~~~~dvvIIGg-G~aG~~~A~~L~~~g~~V~lvE~~ 39 (413)
|.+..+...++|.|| |-.|..+|..|+++|++|+++++.
T Consensus 1 m~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 40 (263)
T 3ai3_A 1 MDMGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQ 40 (263)
T ss_dssp CCCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCC
Confidence 443333455888876 678999999999999999999875
No 489
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=90.84 E-value=0.23 Score=47.94 Aligned_cols=35 Identities=20% Similarity=0.332 Sum_probs=32.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCC
Q 015072 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFL 42 (413)
Q Consensus 8 ~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~~~ 42 (413)
..++|||+|-.|..+|..|.+.|++|+++|+++..
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~ 383 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESP 383 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHH
Confidence 67999999999999999999999999999988654
No 490
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=90.82 E-value=0.27 Score=42.10 Aligned_cols=31 Identities=26% Similarity=0.469 Sum_probs=29.3
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCcEEEEccc
Q 015072 9 DVIVVGAGIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 9 dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~ 39 (413)
.++|||+|-+|..+|..|.+.|.+|+++++.
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~ 148 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRT 148 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 7999999999999999999999999999875
No 491
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=90.81 E-value=0.26 Score=43.17 Aligned_cols=34 Identities=24% Similarity=0.250 Sum_probs=30.9
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
...+.|||+|-+|..+|..|...|.+|+++++..
T Consensus 157 g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 157 GSQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 4679999999999999999999999999999753
No 492
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=90.78 E-value=0.23 Score=47.42 Aligned_cols=35 Identities=26% Similarity=0.414 Sum_probs=31.7
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCC-cEEEEcccCC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQ-KTLLLEQFDF 41 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~-~V~lvE~~~~ 41 (413)
..+|+|||+|-.|..+|..|++.|. +++|+|.+..
T Consensus 327 ~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D~V 362 (598)
T 3vh1_A 327 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTV 362 (598)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCCEEEEECCSBC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEECCCcc
Confidence 4689999999999999999999997 8999998754
No 493
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=90.74 E-value=0.26 Score=43.26 Aligned_cols=33 Identities=24% Similarity=0.368 Sum_probs=29.9
Q ss_pred ccEEEECC-CHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 8 FDVIVVGA-GIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGg-G~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
..|+|+|| |..|..++..|.++|++|.++.+..
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 38 (313)
T 1qyd_A 5 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPE 38 (313)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSC
T ss_pred CEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCC
Confidence 46999997 9999999999999999999998863
No 494
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=90.63 E-value=0.28 Score=42.81 Aligned_cols=34 Identities=29% Similarity=0.332 Sum_probs=30.9
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
...|.|||.|-+|..+|..|...|.+|+++++..
T Consensus 155 g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 155 GANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4579999999999999999999999999999753
No 495
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=90.54 E-value=0.31 Score=42.20 Aligned_cols=33 Identities=33% Similarity=0.407 Sum_probs=29.8
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCC-cEEEEccc
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQ-KTLLLEQF 39 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~-~V~lvE~~ 39 (413)
...++|+|+|-+|.++|+.|++.|. +|+|+.+.
T Consensus 127 ~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~ 160 (283)
T 3jyo_A 127 LDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLD 160 (283)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECC
Confidence 4579999999999999999999998 69999875
No 496
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=90.41 E-value=0.045 Score=50.92 Aligned_cols=43 Identities=21% Similarity=0.182 Sum_probs=34.1
Q ss_pred HHHcCCeEecCceEEEEEeeeccCCCcEEEEeCCccEEEeCeEEEcCCcC
Q 015072 163 AIKNGAVLRDNTEVKTVLKVKDDVRGGVTVVTSSGEEFWGKKCVVTAGAW 212 (413)
Q Consensus 163 ~~~~gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~vV~A~G~~ 212 (413)
+.+.|++++. .+|++|.. + ++ .|++++|+++.+|++|+|+|+.
T Consensus 66 ~~~~gv~~i~-~~v~~Id~--~--~~--~V~~~~g~~i~YD~LViAtG~~ 108 (430)
T 3hyw_A 66 LPKFNIEFIN-EKAESIDP--D--AN--TVTTQSGKKIEYDYLVIATGPK 108 (430)
T ss_dssp GGGGTEEEEC-SCEEEEET--T--TT--EEEETTCCEEECSEEEECCCCE
T ss_pred HHHCCcEEEE-eEEEEEEC--C--CC--EEEECCCCEEECCEEEEeCCCC
Confidence 3456899884 58999988 5 23 4677889889999999999974
No 497
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=90.40 E-value=0.31 Score=42.90 Aligned_cols=33 Identities=18% Similarity=0.236 Sum_probs=29.9
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCC-cEEEEccc
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQ-KTLLLEQF 39 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~-~V~lvE~~ 39 (413)
...++|+|+|-+|.++|+.|++.|. +|+|+.|.
T Consensus 154 gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 154 GKKMTICGAGGAATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CCEEEEECCChHHHHHHHHHHHCCCCEEEEEECC
Confidence 4579999999999999999999998 89999875
No 498
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=90.38 E-value=0.33 Score=41.74 Aligned_cols=34 Identities=21% Similarity=0.244 Sum_probs=30.1
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCC-cEEEEcccC
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQ-KTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~-~V~lvE~~~ 40 (413)
...++|+|+|-+|.++|+.|++.|. +|+|+.+..
T Consensus 120 ~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~ 154 (272)
T 3pwz_A 120 NRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDM 154 (272)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 4679999999999999999999996 999998753
No 499
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=90.37 E-value=0.29 Score=43.73 Aligned_cols=34 Identities=21% Similarity=0.467 Sum_probs=30.6
Q ss_pred CccEEEECC-CHHHHHHHHHHHHcCCcEEEEcccC
Q 015072 7 NFDVIVVGA-GIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGg-G~aG~~~A~~L~~~g~~V~lvE~~~ 40 (413)
...|+|.|| |..|..++..|.++|++|+++++..
T Consensus 27 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~ 61 (343)
T 2b69_A 27 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFF 61 (343)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 467999998 9999999999999999999998753
No 500
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=90.36 E-value=0.31 Score=43.83 Aligned_cols=33 Identities=21% Similarity=0.302 Sum_probs=30.1
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCcEEEEccc
Q 015072 7 NFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 7 ~~dvvIIGgG~aG~~~A~~L~~~g~~V~lvE~~ 39 (413)
...|+|+|.|-.|..+|..|.+.|.+|++.|..
T Consensus 173 GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~ 205 (364)
T 1leh_A 173 GLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVN 205 (364)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred cCEEEEECchHHHHHHHHHHHHCCCEEEEEcCC
Confidence 467999999999999999999999999998854
Done!