Query 015075
Match_columns 413
No_of_seqs 161 out of 1304
Neff 10.3
Searched_HMMs 46136
Date Fri Mar 29 02:51:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015075.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015075hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0253 Synaptic vesicle trans 100.0 2.7E-52 5.7E-57 364.5 30.0 393 1-404 126-527 (528)
2 TIGR01299 synapt_SV2 synaptic 100.0 5.9E-44 1.3E-48 355.3 33.7 401 2-404 216-741 (742)
3 TIGR00887 2A0109 phosphate:H+ 100.0 1.8E-42 3.9E-47 339.1 33.7 375 2-410 70-502 (502)
4 KOG0569 Permease of the major 100.0 5.6E-42 1.2E-46 321.3 33.1 373 2-412 74-470 (485)
5 TIGR00898 2A0119 cation transp 100.0 5.5E-40 1.2E-44 322.7 34.4 361 2-407 141-505 (505)
6 KOG0255 Synaptic vesicle trans 100.0 7E-38 1.5E-42 308.4 33.4 372 2-412 132-508 (521)
7 KOG0254 Predicted transporter 100.0 2.2E-37 4.7E-42 303.4 31.6 378 2-410 103-497 (513)
8 PF00083 Sugar_tr: Sugar (and 100.0 4.9E-44 1.1E-48 346.5 -19.9 372 2-410 60-450 (451)
9 PRK10642 proline/glycine betai 100.0 2.1E-36 4.6E-41 295.3 32.6 347 2-405 71-438 (490)
10 PRK10077 xylE D-xylose transpo 100.0 5.6E-36 1.2E-40 292.4 34.1 373 2-412 69-473 (479)
11 KOG0252 Inorganic phosphate tr 100.0 2E-37 4.4E-42 279.5 12.8 376 2-412 98-513 (538)
12 PRK09952 shikimate transporter 100.0 4.1E-33 9E-38 268.3 32.5 332 3-400 79-436 (438)
13 TIGR00879 SP MFS transporter, 100.0 5.9E-33 1.3E-37 270.6 29.8 378 2-406 85-480 (481)
14 PRK10406 alpha-ketoglutarate t 100.0 3.5E-32 7.5E-37 261.7 33.1 330 2-404 77-430 (432)
15 TIGR00903 2A0129 major facilit 100.0 4.2E-31 9.1E-36 247.5 29.4 320 2-395 40-364 (368)
16 PRK15075 citrate-proton sympor 100.0 1.3E-29 2.8E-34 244.1 32.4 340 3-409 71-432 (434)
17 PRK12307 putative sialic acid 100.0 7.7E-30 1.7E-34 245.4 30.7 343 2-401 67-414 (426)
18 PRK11551 putative 3-hydroxyphe 100.0 4.6E-29 1E-33 238.5 31.3 329 2-395 64-395 (406)
19 TIGR02332 HpaX 4-hydroxyphenyl 100.0 1.3E-29 2.7E-34 242.2 27.0 336 2-380 57-405 (412)
20 TIGR00891 2A0112 putative sial 100.0 8.7E-29 1.9E-33 236.3 29.6 327 2-373 61-392 (405)
21 COG2271 UhpC Sugar phosphate p 100.0 4.3E-30 9.3E-35 231.2 18.6 342 3-395 79-433 (448)
22 PRK11663 regulatory protein Uh 100.0 3.9E-28 8.5E-33 233.7 28.3 351 2-404 72-432 (434)
23 PRK03545 putative arabinose tr 100.0 2.2E-27 4.8E-32 225.6 31.5 319 3-396 59-380 (390)
24 PRK09556 uhpT sugar phosphate 100.0 3E-28 6.5E-33 236.7 25.6 348 3-400 79-454 (467)
25 TIGR00895 2A0115 benzoate tran 100.0 1.8E-27 3.9E-32 226.5 29.2 330 2-368 66-397 (398)
26 PRK10489 enterobactin exporter 100.0 1.6E-27 3.5E-32 228.6 27.7 344 2-412 66-415 (417)
27 TIGR00893 2A0114 d-galactonate 100.0 1.7E-27 3.7E-32 226.3 27.0 342 2-393 43-396 (399)
28 PRK09705 cynX putative cyanate 100.0 3.5E-26 7.5E-31 217.3 31.7 328 2-406 58-391 (393)
29 PRK05122 major facilitator sup 100.0 2.9E-26 6.3E-31 218.6 31.0 324 2-406 65-398 (399)
30 PRK03893 putative sialic acid 100.0 1.9E-26 4.2E-31 226.2 29.7 370 2-398 69-456 (496)
31 TIGR00883 2A0106 metabolite-pr 100.0 1.3E-26 2.9E-31 220.1 27.4 306 2-373 49-377 (394)
32 TIGR00890 2A0111 Oxalate/Forma 100.0 2.4E-26 5.1E-31 217.1 27.4 317 2-388 52-374 (377)
33 PRK11273 glpT sn-glycerol-3-ph 100.0 5.7E-26 1.2E-30 219.8 28.9 350 2-402 77-442 (452)
34 PLN00028 nitrate transmembrane 100.0 7.2E-26 1.6E-30 220.1 29.1 330 2-396 85-433 (476)
35 COG2814 AraJ Arabinose efflux 99.9 3.6E-25 7.8E-30 202.2 29.7 320 3-395 63-385 (394)
36 TIGR00894 2A0114euk Na(+)-depe 99.9 2.3E-25 5.1E-30 216.6 28.7 339 2-394 90-448 (465)
37 PRK03699 putative transporter; 99.9 1.7E-25 3.7E-30 212.9 26.7 332 2-406 56-389 (394)
38 PRK12382 putative transporter; 99.9 7.2E-25 1.6E-29 208.5 30.6 315 2-395 65-388 (392)
39 TIGR00712 glpT glycerol-3-phos 99.9 3.9E-25 8.4E-30 213.2 26.9 350 2-401 75-438 (438)
40 TIGR00900 2A0121 H+ Antiporter 99.9 6.9E-25 1.5E-29 206.3 27.8 305 3-371 49-363 (365)
41 TIGR00899 2A0120 sugar efflux 99.9 2.3E-24 4.9E-29 203.8 31.4 319 3-394 48-372 (375)
42 PRK09874 drug efflux system pr 99.9 1.6E-24 3.4E-29 207.3 28.1 329 2-396 68-398 (408)
43 cd06174 MFS The Major Facilita 99.9 2.9E-24 6.2E-29 200.8 29.1 300 2-394 48-350 (352)
44 PRK10213 nepI ribonucleoside t 99.9 1.1E-23 2.4E-28 200.1 32.1 128 3-130 70-199 (394)
45 TIGR00881 2A0104 phosphoglycer 99.9 5.6E-25 1.2E-29 207.9 22.6 323 2-374 44-375 (379)
46 PRK10504 putative transporter; 99.9 1.2E-23 2.5E-28 205.1 32.1 348 2-373 59-417 (471)
47 TIGR00711 efflux_EmrB drug res 99.9 2.1E-24 4.6E-29 211.2 25.6 348 2-371 51-410 (485)
48 PRK11010 ampG muropeptide tran 99.9 1.7E-23 3.8E-28 203.8 31.4 329 3-396 60-403 (491)
49 TIGR00892 2A0113 monocarboxyla 99.9 1.5E-24 3.3E-29 209.7 23.7 338 3-390 69-415 (455)
50 PF07690 MFS_1: Major Facilita 99.9 2.4E-24 5.3E-29 201.6 22.7 301 2-362 46-352 (352)
51 KOG2532 Permease of the major 99.9 1.1E-24 2.4E-29 207.3 20.2 341 2-395 87-446 (466)
52 PRK10091 MFS transport protein 99.9 2.4E-23 5.2E-28 197.2 28.8 129 2-130 52-182 (382)
53 PRK14995 methyl viologen resis 99.9 2.9E-23 6.3E-28 203.0 30.0 344 3-370 56-412 (495)
54 PRK10473 multidrug efflux syst 99.9 5.4E-23 1.2E-27 195.6 30.3 128 3-130 53-182 (392)
55 PRK15402 multidrug efflux syst 99.9 1.7E-22 3.8E-27 193.1 32.0 128 3-130 63-192 (406)
56 TIGR00897 2A0118 polyol permea 99.9 1.8E-22 3.8E-27 192.6 31.8 326 2-395 62-400 (402)
57 TIGR00710 efflux_Bcr_CflA drug 99.9 2.6E-22 5.6E-27 190.4 32.7 129 2-130 54-184 (385)
58 PRK15034 nitrate/nitrite trans 99.9 1.1E-22 2.5E-27 192.3 28.6 317 3-395 85-453 (462)
59 PRK11195 lysophospholipid tran 99.9 1.3E-22 2.9E-27 192.6 28.9 325 3-396 53-380 (393)
60 PRK11102 bicyclomycin/multidru 99.9 2E-22 4.2E-27 190.8 29.9 129 2-130 40-170 (377)
61 PRK11043 putative transporter; 99.9 4E-22 8.8E-27 190.2 31.4 129 2-130 55-184 (401)
62 PRK15011 sugar efflux transpor 99.9 5.3E-22 1.2E-26 188.7 31.8 321 4-399 68-393 (393)
63 PRK15403 multidrug efflux syst 99.9 2.4E-21 5.1E-26 185.2 31.9 130 2-131 65-196 (413)
64 PRK03633 putative MFS family t 99.9 2.2E-21 4.7E-26 183.8 30.9 307 2-388 55-364 (381)
65 TIGR00886 2A0108 nitrite extru 99.9 3.3E-22 7.1E-27 188.4 23.4 130 2-131 51-193 (366)
66 PRK11646 multidrug resistance 99.9 2.1E-21 4.6E-26 184.8 28.2 124 4-128 62-187 (400)
67 PRK08633 2-acyl-glycerophospho 99.9 1.5E-21 3.2E-26 210.3 29.9 336 2-399 61-413 (1146)
68 COG2223 NarK Nitrate/nitrite t 99.9 6.5E-22 1.4E-26 178.9 22.7 318 6-394 67-399 (417)
69 KOG2533 Permease of the major 99.9 3.4E-22 7.4E-27 190.7 20.3 130 2-131 95-232 (495)
70 PRK11902 ampG muropeptide tran 99.9 2.5E-20 5.4E-25 177.8 31.5 322 3-396 47-390 (402)
71 PRK10054 putative transporter; 99.9 7.1E-21 1.5E-25 180.9 25.9 313 3-387 58-375 (395)
72 PRK10133 L-fucose transporter; 99.9 4.1E-20 8.8E-25 177.7 30.7 309 2-380 75-417 (438)
73 PRK11652 emrD multidrug resist 99.9 4.6E-20 9.9E-25 175.7 30.8 130 2-131 57-188 (394)
74 TIGR00901 2A0125 AmpG-related 99.9 9.3E-21 2E-25 177.9 25.3 287 5-355 38-355 (356)
75 PRK06814 acylglycerophosphoeth 99.9 7.2E-21 1.6E-25 204.4 26.0 304 2-370 66-395 (1140)
76 TIGR00885 fucP L-fucose:H+ sym 99.9 7.5E-20 1.6E-24 174.3 29.6 297 2-371 52-381 (410)
77 PRK09528 lacY galactoside perm 99.9 3.2E-20 6.9E-25 178.2 26.4 345 2-410 60-418 (420)
78 TIGR00889 2A0110 nucleoside tr 99.9 1.2E-19 2.6E-24 173.5 30.1 330 2-402 52-408 (418)
79 KOG1330 Sugar transporter/spin 99.9 6.5E-23 1.4E-27 186.8 5.9 129 2-130 82-213 (493)
80 TIGR00902 2A0127 phenyl propri 99.9 2.5E-19 5.5E-24 169.7 30.5 312 3-389 54-372 (382)
81 TIGR00896 CynX cyanate transpo 99.9 1.4E-19 3.1E-24 169.8 27.2 298 2-374 49-351 (355)
82 TIGR00792 gph sugar (Glycoside 99.9 1.8E-19 3.9E-24 174.0 27.4 305 2-373 49-382 (437)
83 TIGR00882 2A0105 oligosacchari 99.9 5.3E-19 1.2E-23 168.4 27.6 328 2-393 52-392 (396)
84 KOG2615 Permease of the major 99.9 3.6E-20 7.7E-25 164.5 17.5 129 3-131 83-218 (451)
85 PRK11128 putative 3-phenylprop 99.8 2.4E-18 5.2E-23 163.1 30.5 310 2-386 53-369 (382)
86 PTZ00207 hypothetical protein; 99.8 4.1E-18 8.9E-23 165.9 26.3 141 4-146 77-227 (591)
87 TIGR00806 rfc RFC reduced fola 99.8 6.4E-19 1.4E-23 164.0 18.6 128 3-131 77-207 (511)
88 PRK10207 dipeptide/tripeptide 99.8 7.6E-18 1.7E-22 163.6 26.7 111 5-115 67-182 (489)
89 PF06609 TRI12: Fungal trichot 99.8 1.2E-17 2.7E-22 161.5 26.5 343 3-367 93-463 (599)
90 TIGR00924 yjdL_sub1_fam amino 99.8 2.6E-17 5.5E-22 159.8 28.9 117 3-119 63-184 (475)
91 KOG3764 Vesicular amine transp 99.8 2.3E-19 5E-24 160.4 12.4 125 3-127 121-247 (464)
92 PF05977 MFS_3: Transmembrane 99.8 2.4E-17 5.2E-22 159.9 27.1 326 3-393 60-391 (524)
93 KOG2504 Monocarboxylate transp 99.8 4.6E-18 1E-22 164.1 18.3 367 3-395 96-475 (509)
94 PRK09584 tppB putative tripept 99.8 8.7E-17 1.9E-21 157.0 26.0 113 6-118 75-192 (500)
95 TIGR00805 oat sodium-independe 99.8 1.8E-17 3.9E-22 165.4 19.4 127 3-129 83-283 (633)
96 TIGR02718 sider_RhtX_FptX side 99.8 1.2E-15 2.7E-20 145.0 29.4 311 9-389 60-384 (390)
97 TIGR01301 GPH_sucrose GPH fami 99.8 5.2E-16 1.1E-20 148.2 26.1 347 2-401 53-476 (477)
98 TIGR00788 fbt folate/biopterin 99.7 8.1E-16 1.8E-20 149.0 22.6 318 5-373 77-415 (468)
99 PRK09669 putative symporter Ya 99.7 1E-14 2.3E-19 141.0 27.3 300 3-373 60-390 (444)
100 PF11700 ATG22: Vacuole efflux 99.7 8.8E-14 1.9E-18 133.8 33.3 336 5-403 87-474 (477)
101 PRK10429 melibiose:sodium symp 99.6 1.3E-13 2.8E-18 134.4 26.1 305 3-372 57-394 (473)
102 COG0738 FucP Fucose permease [ 99.6 7.2E-13 1.6E-17 119.9 26.9 314 3-388 63-401 (422)
103 TIGR01272 gluP glucose/galacto 99.6 8.9E-13 1.9E-17 120.8 27.2 272 37-379 6-298 (310)
104 PF03825 Nuc_H_symport: Nucleo 99.6 1.9E-12 4.1E-17 122.2 29.9 330 2-400 51-399 (400)
105 PF13347 MFS_2: MFS/sugar tran 99.6 7.2E-14 1.6E-18 134.5 20.7 299 4-371 53-384 (428)
106 PRK10642 proline/glycine betai 99.6 9.6E-15 2.1E-19 142.9 13.9 147 3-150 301-458 (490)
107 TIGR00880 2_A_01_02 Multidrug 99.6 2.7E-14 5.8E-19 114.7 12.8 128 2-129 12-141 (141)
108 PRK15462 dipeptide/tripeptide 99.6 1.9E-12 4.1E-17 124.4 27.1 116 3-118 60-180 (493)
109 COG2270 Permeases of the major 99.6 2.3E-12 5E-17 117.4 23.4 337 5-405 75-437 (438)
110 PRK11462 putative transporter; 99.6 1E-11 2.2E-16 120.4 29.7 117 4-120 61-197 (460)
111 COG2807 CynX Cyanate permease 99.5 8E-12 1.7E-16 111.5 25.6 298 4-378 63-366 (395)
112 KOG4686 Predicted sugar transp 99.5 1.1E-12 2.4E-17 112.6 15.3 92 4-95 95-191 (459)
113 PRK09848 glucuronide transport 99.5 2.8E-11 6E-16 117.3 27.2 105 267-371 275-388 (448)
114 PF01306 LacY_symp: LacY proto 99.5 2.6E-11 5.6E-16 112.8 25.5 141 262-402 265-406 (412)
115 COG2211 MelB Na+/melibiose sym 99.4 1.2E-10 2.5E-15 109.6 25.8 302 4-371 64-396 (467)
116 TIGR01299 synapt_SV2 synaptic 99.4 8.8E-13 1.9E-17 132.7 11.8 128 2-130 609-737 (742)
117 TIGR00889 2A0110 nucleoside tr 99.3 1.8E-11 3.8E-16 117.4 11.4 128 3-130 266-406 (418)
118 TIGR00880 2_A_01_02 Multidrug 99.3 7.6E-11 1.7E-15 94.4 13.1 133 267-399 9-141 (141)
119 PRK09528 lacY galactoside perm 99.3 2.1E-11 4.6E-16 117.2 10.7 128 3-130 277-407 (420)
120 KOG2563 Permease of the major 99.3 6.7E-10 1.4E-14 102.1 19.1 336 6-407 97-461 (480)
121 PRK05122 major facilitator sup 99.3 4.8E-11 1E-15 113.9 12.0 126 3-128 264-390 (399)
122 PRK15011 sugar efflux transpor 99.2 9.3E-11 2E-15 111.6 12.9 125 3-128 267-392 (393)
123 COG3104 PTR2 Dipeptide/tripept 99.2 7.3E-10 1.6E-14 103.5 18.2 122 5-126 78-205 (498)
124 TIGR02332 HpaX 4-hydroxyphenyl 99.2 6.3E-10 1.4E-14 106.5 18.4 138 264-401 51-194 (412)
125 TIGR00710 efflux_Bcr_CflA drug 99.2 5.6E-10 1.2E-14 105.8 16.6 142 262-403 46-187 (385)
126 PF07690 MFS_1: Major Facilita 99.2 9.2E-10 2E-14 102.8 17.9 138 262-399 38-175 (352)
127 PLN00028 nitrate transmembrane 99.2 1.1E-09 2.4E-14 106.9 18.7 134 264-398 79-221 (476)
128 KOG2816 Predicted transporter 99.2 1.5E-09 3.2E-14 103.7 18.7 307 3-369 77-390 (463)
129 TIGR00895 2A0115 benzoate tran 99.2 4.2E-10 9.1E-15 107.0 15.0 138 263-400 59-196 (398)
130 PRK11551 putative 3-hydroxyphe 99.2 1E-09 2.2E-14 105.0 17.1 139 262-400 56-194 (406)
131 PRK10054 putative transporter; 99.2 9.2E-10 2E-14 104.8 16.6 136 264-400 51-186 (395)
132 PRK10213 nepI ribonucleoside t 99.2 1.7E-09 3.7E-14 102.9 18.1 137 264-400 63-199 (394)
133 TIGR00893 2A0114 d-galactonate 99.2 5.2E-10 1.1E-14 106.1 13.9 140 262-401 35-174 (399)
134 cd06174 MFS The Major Facilita 99.2 2.5E-10 5.4E-15 106.4 11.2 124 2-125 225-350 (352)
135 TIGR00891 2A0112 putative sial 99.1 2.4E-09 5.3E-14 102.1 18.2 138 263-401 54-193 (405)
136 PRK15403 multidrug efflux syst 99.1 1.9E-09 4.2E-14 103.2 17.3 138 264-401 59-196 (413)
137 PRK12382 putative transporter; 99.1 2.3E-10 5E-15 108.9 10.8 120 3-122 264-384 (392)
138 PRK09874 drug efflux system pr 99.1 2.1E-10 4.6E-15 109.7 10.6 120 3-122 273-393 (408)
139 PRK10473 multidrug efflux syst 99.1 1.8E-09 3.9E-14 102.8 16.8 140 263-402 45-184 (392)
140 TIGR00711 efflux_EmrB drug res 99.1 1.3E-09 2.9E-14 106.7 15.5 139 263-401 44-182 (485)
141 PRK15402 multidrug efflux syst 99.1 3.1E-09 6.8E-14 101.6 17.2 139 263-401 55-193 (406)
142 PF03092 BT1: BT1 family; Int 99.1 2.1E-08 4.6E-13 96.2 21.9 124 5-128 41-177 (433)
143 TIGR00899 2A0120 sugar efflux 99.1 8.6E-10 1.9E-14 104.2 12.2 125 3-128 250-375 (375)
144 TIGR00900 2A0121 H+ Antiporter 99.1 5.4E-09 1.2E-13 98.1 17.5 134 262-395 40-178 (365)
145 PRK11102 bicyclomycin/multidru 99.1 1.8E-09 3.9E-14 102.1 14.3 139 263-401 33-171 (377)
146 PRK03893 putative sialic acid 99.1 4.5E-09 9.9E-14 103.3 17.5 118 263-380 62-179 (496)
147 PRK03545 putative arabinose tr 99.1 6E-09 1.3E-13 99.1 17.8 136 264-399 52-187 (390)
148 PRK11663 regulatory protein Uh 99.1 4E-09 8.6E-14 101.8 16.7 137 263-399 65-201 (434)
149 PRK10504 putative transporter; 99.1 4.9E-09 1.1E-13 102.4 17.4 136 265-400 54-189 (471)
150 TIGR00890 2A0111 Oxalate/Forma 99.1 4.5E-10 9.8E-15 105.9 9.9 117 2-118 254-373 (377)
151 PRK12307 putative sialic acid 99.1 5.2E-09 1.1E-13 100.7 17.0 119 262-380 59-177 (426)
152 PRK03699 putative transporter; 99.1 1.2E-08 2.7E-13 97.1 18.6 129 264-392 50-179 (394)
153 TIGR00881 2A0104 phosphoglycer 99.1 1.1E-09 2.3E-14 103.4 10.9 139 262-400 36-175 (379)
154 PRK11273 glpT sn-glycerol-3-ph 99.0 8.2E-09 1.8E-13 100.2 17.0 139 262-400 69-212 (452)
155 PRK14995 methyl viologen resis 99.0 1.4E-08 3E-13 99.7 18.3 136 266-401 51-187 (495)
156 PRK15462 dipeptide/tripeptide 99.0 9.8E-09 2.1E-13 99.0 16.6 125 266-390 55-183 (493)
157 PRK10091 MFS transport protein 99.0 1.1E-08 2.5E-13 96.9 16.3 139 262-400 44-182 (382)
158 PRK11652 emrD multidrug resist 99.0 1.6E-08 3.5E-13 96.3 17.4 140 262-401 49-188 (394)
159 TIGR00887 2A0109 phosphate:H+ 99.0 1.9E-08 4E-13 99.1 18.1 107 262-368 62-174 (502)
160 PRK11646 multidrug resistance 99.0 1.9E-08 4.2E-13 95.9 17.7 133 266-399 56-188 (400)
161 PRK11043 putative transporter; 99.0 1.6E-08 3.6E-13 96.5 17.0 138 262-399 47-184 (401)
162 TIGR00894 2A0114euk Na(+)-depe 99.0 8.8E-09 1.9E-13 100.4 15.2 136 264-399 84-222 (465)
163 TIGR00886 2A0108 nitrite extru 99.0 1.6E-08 3.6E-13 95.1 16.4 107 263-370 44-151 (366)
164 TIGR00903 2A0129 major facilit 99.0 1E-08 2.3E-13 96.4 14.8 136 264-400 34-169 (368)
165 TIGR00892 2A0113 monocarboxyla 99.0 8.6E-10 1.9E-14 107.0 7.2 118 3-120 291-414 (455)
166 TIGR00712 glpT glycerol-3-phos 99.0 1.3E-08 2.8E-13 98.4 14.9 139 262-400 67-210 (438)
167 TIGR00924 yjdL_sub1_fam amino 99.0 2.3E-08 5E-13 97.4 16.7 130 263-392 55-188 (475)
168 PF01770 Folate_carrier: Reduc 99.0 2.9E-07 6.3E-12 85.6 22.5 126 6-131 59-186 (412)
169 PRK09556 uhpT sugar phosphate 98.9 8E-09 1.7E-13 100.7 12.6 119 2-120 308-442 (467)
170 PRK03633 putative MFS family t 98.9 6.7E-09 1.5E-13 98.5 11.7 121 2-125 249-370 (381)
171 TIGR00898 2A0119 cation transp 98.9 1.5E-08 3.2E-13 99.9 14.5 134 262-399 133-266 (505)
172 PRK09952 shikimate transporter 98.9 1.2E-08 2.6E-13 98.5 13.0 128 3-130 301-436 (438)
173 PRK10077 xylE D-xylose transpo 98.9 2.3E-08 5.1E-13 97.8 15.1 138 262-400 61-218 (479)
174 KOG0255 Synaptic vesicle trans 98.9 1.5E-08 3.2E-13 100.3 13.6 136 262-401 124-259 (521)
175 TIGR00879 SP MFS transporter, 98.9 2.3E-08 4.9E-13 97.5 14.7 138 262-400 77-220 (481)
176 COG2814 AraJ Arabinose efflux 98.9 7.2E-08 1.6E-12 89.1 16.9 137 261-397 53-189 (394)
177 PRK15075 citrate-proton sympor 98.9 6.3E-08 1.4E-12 93.5 17.5 99 270-368 70-176 (434)
178 KOG2615 Permease of the major 98.9 4.8E-09 1E-13 94.4 8.6 105 265-370 77-181 (451)
179 KOG2325 Predicted transporter/ 98.9 2.1E-08 4.5E-13 94.8 13.3 98 2-99 85-188 (488)
180 PRK11195 lysophospholipid tran 98.9 7.8E-08 1.7E-12 91.5 17.3 132 264-400 46-177 (393)
181 TIGR00902 2A0127 phenyl propri 98.9 1.3E-08 2.9E-13 96.4 11.6 118 3-122 255-374 (382)
182 PRK15034 nitrate/nitrite trans 98.9 2.1E-07 4.7E-12 88.9 19.7 137 262-399 76-235 (462)
183 PRK10406 alpha-ketoglutarate t 98.9 7.5E-08 1.6E-12 92.9 16.8 137 264-401 71-223 (432)
184 COG2271 UhpC Sugar phosphate p 98.9 2.5E-08 5.3E-13 91.4 12.2 140 260-399 68-209 (448)
185 PRK10489 enterobactin exporter 98.9 8.6E-09 1.9E-13 99.0 9.3 129 2-130 273-403 (417)
186 PF03209 PUCC: PUCC protein; 98.8 6.7E-06 1.4E-10 75.9 26.7 101 6-106 32-155 (403)
187 PRK10207 dipeptide/tripeptide 98.8 1.2E-07 2.5E-12 92.6 16.4 112 270-381 64-179 (489)
188 TIGR00897 2A0118 polyol permea 98.8 1.4E-07 3E-12 90.1 15.9 113 262-374 54-171 (402)
189 PF05977 MFS_3: Transmembrane 98.8 2.3E-07 5.1E-12 90.6 17.2 136 268-403 57-197 (524)
190 TIGR00883 2A0106 metabolite-pr 98.8 3E-08 6.6E-13 94.0 9.3 113 3-115 270-389 (394)
191 TIGR00882 2A0105 oligosacchari 98.7 6.9E-08 1.5E-12 92.1 11.0 119 3-121 269-389 (396)
192 KOG3764 Vesicular amine transp 98.7 3.7E-08 8.1E-13 89.3 8.5 142 262-403 112-254 (464)
193 PRK09584 tppB putative tripept 98.7 6.3E-07 1.4E-11 87.9 17.8 115 273-387 74-192 (500)
194 PF11700 ATG22: Vacuole efflux 98.7 1.7E-07 3.8E-12 90.5 13.2 127 2-128 331-469 (477)
195 TIGR00792 gph sugar (Glycoside 98.7 1.2E-07 2.5E-12 91.7 11.9 104 2-105 271-383 (437)
196 PRK09705 cynX putative cyanate 98.7 3.5E-07 7.6E-12 87.1 14.9 124 264-388 52-176 (393)
197 KOG1330 Sugar transporter/spin 98.7 1E-08 2.3E-13 94.7 3.9 147 262-408 74-221 (493)
198 COG2223 NarK Nitrate/nitrite t 98.7 1.3E-06 2.8E-11 80.3 17.2 139 259-399 52-196 (417)
199 PRK11010 ampG muropeptide tran 98.7 1.7E-07 3.8E-12 91.7 11.9 128 2-129 273-405 (491)
200 PRK06814 acylglycerophosphoeth 98.7 9E-07 1.9E-11 96.0 18.1 134 265-399 61-197 (1140)
201 PRK11128 putative 3-phenylprop 98.6 2.5E-07 5.3E-12 87.8 11.8 115 3-119 255-371 (382)
202 PF06609 TRI12: Fungal trichot 98.6 1E-06 2.2E-11 86.3 16.0 126 264-390 86-211 (599)
203 TIGR00901 2A0125 AmpG-related 98.6 8.1E-07 1.8E-11 83.3 14.6 129 273-401 38-183 (356)
204 TIGR00885 fucP L-fucose:H+ sym 98.6 2E-06 4.4E-11 82.2 17.3 108 262-369 44-154 (410)
205 KOG3098 Uncharacterized conser 98.6 1.5E-05 3.2E-10 75.6 22.4 95 3-98 65-160 (461)
206 PRK08633 2-acyl-glycerophospho 98.6 1.6E-06 3.5E-11 94.2 18.0 109 263-371 54-165 (1146)
207 PF03137 OATP: Organic Anion T 98.6 9.7E-09 2.1E-13 100.6 -0.1 127 3-129 53-252 (539)
208 COG0477 ProP Permeases of the 98.6 6.6E-07 1.4E-11 81.3 11.8 115 3-117 54-175 (338)
209 KOG0254 Predicted transporter 98.6 7.8E-07 1.7E-11 87.8 13.0 138 262-401 95-234 (513)
210 TIGR02718 sider_RhtX_FptX side 98.6 6.5E-07 1.4E-11 85.2 11.8 118 3-120 259-384 (390)
211 PTZ00207 hypothetical protein; 98.5 3.3E-06 7.1E-11 83.2 16.5 121 272-395 77-204 (591)
212 PRK10133 L-fucose transporter; 98.5 6.8E-06 1.5E-10 79.4 18.2 108 261-368 66-176 (438)
213 TIGR00806 rfc RFC reduced fola 98.5 6E-06 1.3E-10 78.2 16.6 129 266-396 72-203 (511)
214 KOG0569 Permease of the major 98.5 3.3E-06 7.2E-11 80.7 14.4 136 265-401 69-209 (485)
215 PRK09848 glucuronide transport 98.5 2E-06 4.3E-11 83.5 12.6 103 3-105 279-391 (448)
216 TIGR00896 CynX cyanate transpo 98.5 6E-06 1.3E-10 77.4 15.3 109 262-372 41-149 (355)
217 COG2270 Permeases of the major 98.4 1.3E-06 2.8E-11 80.4 9.6 128 2-129 302-431 (438)
218 TIGR00805 oat sodium-independe 98.4 3.1E-06 6.8E-11 85.2 13.2 105 266-370 78-233 (633)
219 TIGR01301 GPH_sucrose GPH fami 98.4 1.3E-05 2.9E-10 77.2 16.8 139 262-400 45-222 (477)
220 KOG2532 Permease of the major 98.4 5.1E-06 1.1E-10 80.0 13.7 145 248-395 68-215 (466)
221 PRK11902 ampG muropeptide tran 98.4 2.4E-05 5.3E-10 74.7 17.0 131 270-401 46-186 (402)
222 PF05631 DUF791: Protein of un 98.3 0.00016 3.5E-09 65.8 20.8 124 5-129 86-219 (354)
223 KOG0253 Synaptic vesicle trans 98.3 6.7E-07 1.4E-11 80.5 5.3 122 4-129 397-522 (528)
224 PF03825 Nuc_H_symport: Nucleo 98.2 1.6E-05 3.4E-10 75.5 12.7 122 7-128 262-397 (400)
225 KOG2816 Predicted transporter 98.2 1E-05 2.2E-10 77.6 11.3 139 265-406 71-209 (463)
226 PF00083 Sugar_tr: Sugar (and 98.2 4.3E-08 9.4E-13 95.1 -4.9 138 262-399 52-194 (451)
227 KOG3626 Organic anion transpor 98.2 0.00032 6.9E-09 69.9 21.2 126 5-130 149-346 (735)
228 PF06813 Nodulin-like: Nodulin 98.2 3.2E-05 6.9E-10 67.7 12.7 121 6-127 54-182 (250)
229 PRK09669 putative symporter Ya 98.2 2.9E-05 6.3E-10 75.2 13.8 103 3-105 279-391 (444)
230 COG3104 PTR2 Dipeptide/tripept 98.2 1.9E-05 4.2E-10 74.4 11.4 127 272-398 77-208 (498)
231 PRK10429 melibiose:sodium symp 98.2 6.2E-05 1.3E-09 73.6 15.5 103 2-104 280-395 (473)
232 PF01306 LacY_symp: LacY proto 98.1 1.4E-05 2.9E-10 75.0 9.8 121 7-127 278-401 (412)
233 KOG2504 Monocarboxylate transp 98.1 2.7E-05 5.9E-10 75.9 12.2 127 269-397 94-222 (509)
234 TIGR00788 fbt folate/biopterin 98.1 8.6E-06 1.9E-10 79.3 8.8 127 2-128 302-447 (468)
235 TIGR01272 gluP glucose/galacto 98.1 1.8E-05 3.9E-10 72.6 9.9 108 1-111 191-299 (310)
236 KOG0252 Inorganic phosphate tr 98.1 1.3E-06 2.9E-11 80.9 2.1 128 4-131 364-502 (538)
237 PF02487 CLN3: CLN3 protein; 98.0 0.0036 7.8E-08 58.6 23.4 115 7-126 78-194 (402)
238 COG0738 FucP Fucose permease [ 98.0 0.00029 6.2E-09 64.9 14.8 106 265-370 57-165 (422)
239 PF13347 MFS_2: MFS/sugar tran 98.0 2.6E-05 5.7E-10 75.1 8.8 101 2-102 274-384 (428)
240 PF06813 Nodulin-like: Nodulin 97.9 0.00022 4.8E-09 62.5 12.8 107 262-370 43-156 (250)
241 KOG2533 Permease of the major 97.9 0.0002 4.3E-09 69.4 12.2 140 262-401 87-232 (495)
242 PF05978 UNC-93: Ion channel r 97.8 0.00018 3.8E-09 58.2 9.1 96 3-99 52-148 (156)
243 KOG3762 Predicted transporter 97.8 5.6E-05 1.2E-09 71.7 6.5 120 6-125 424-545 (618)
244 COG2211 MelB Na+/melibiose sym 97.7 0.00051 1.1E-08 65.4 12.8 99 3-101 287-395 (467)
245 PF06963 FPN1: Ferroportin1 (F 97.7 0.05 1.1E-06 51.9 27.2 102 262-363 299-410 (432)
246 TIGR00926 2A1704 Peptide:H+ sy 97.7 0.00048 1E-08 69.3 12.2 118 5-122 40-177 (654)
247 KOG3810 Micronutrient transpor 97.6 0.00025 5.4E-09 63.7 8.0 121 11-131 65-187 (433)
248 KOG3762 Predicted transporter 97.6 0.0031 6.8E-08 60.2 15.4 127 267-393 417-544 (618)
249 PRK11462 putative transporter; 97.5 0.0028 6E-08 61.7 15.2 138 262-399 51-207 (460)
250 KOG4332 Predicted sugar transp 97.1 0.075 1.6E-06 46.5 17.0 68 7-77 91-160 (454)
251 TIGR00769 AAA ADP/ATP carrier 97.0 0.34 7.4E-06 46.9 26.1 95 5-100 61-189 (472)
252 KOG4686 Predicted sugar transp 97.0 0.0044 9.5E-08 54.5 8.9 108 4-113 316-428 (459)
253 PF00854 PTR2: POT family; In 97.0 0.0033 7.1E-08 59.4 9.0 106 19-124 2-120 (372)
254 TIGR00926 2A1704 Peptide:H+ sy 97.0 0.022 4.9E-07 57.5 14.9 122 271-392 38-178 (654)
255 PF05631 DUF791: Protein of un 96.9 0.033 7.2E-07 51.0 13.8 133 269-402 82-222 (354)
256 KOG0637 Sucrose transporter an 96.9 0.0041 8.9E-08 58.3 7.8 102 4-109 83-208 (498)
257 PF03092 BT1: BT1 family; Int 96.8 0.007 1.5E-07 58.3 9.7 129 273-402 41-181 (433)
258 PF13000 Acatn: Acetyl-coenzym 96.8 0.55 1.2E-05 45.2 21.1 42 328-369 424-465 (544)
259 TIGR00769 AAA ADP/ATP carrier 96.6 0.3 6.4E-06 47.4 18.7 49 321-369 140-189 (472)
260 PF03209 PUCC: PUCC protein; 96.5 0.029 6.4E-07 52.3 10.5 104 272-375 30-155 (403)
261 TIGR00939 2a57 Equilibrative N 96.4 0.47 1E-05 45.7 18.8 39 326-364 389-427 (437)
262 KOG1237 H+/oligopeptide sympor 96.1 1.7 3.6E-05 43.5 21.2 118 4-121 89-239 (571)
263 KOG2563 Permease of the major 95.6 0.21 4.6E-06 47.2 11.7 107 265-371 88-202 (480)
264 COG2807 CynX Cyanate permease 95.6 0.33 7.2E-06 44.6 12.6 128 264-393 55-183 (395)
265 KOG3574 Acetyl-CoA transporter 95.2 1.7 3.6E-05 40.5 15.7 43 328-370 388-430 (510)
266 KOG2325 Predicted transporter/ 95.1 0.34 7.4E-06 46.7 11.9 139 262-401 77-234 (488)
267 PF05978 UNC-93: Ion channel r 95.1 0.57 1.2E-05 37.9 11.5 101 267-368 48-148 (156)
268 COG0477 ProP Permeases of the 95.0 0.52 1.1E-05 42.1 12.6 104 267-370 50-157 (338)
269 PF03219 TLC: TLC ATP/ADP tran 94.7 4.7 0.0001 39.4 19.9 95 6-101 77-205 (491)
270 PF07672 MFS_Mycoplasma: Mycop 94.5 1.4 3E-05 38.7 12.9 54 72-125 2-60 (267)
271 PF03219 TLC: TLC ATP/ADP tran 92.6 8.9 0.00019 37.6 16.4 42 329-370 164-205 (491)
272 PF12832 MFS_1_like: MFS_1 lik 92.4 0.086 1.9E-06 37.0 1.8 27 2-28 49-75 (77)
273 PF01770 Folate_carrier: Reduc 92.2 6.6 0.00014 37.3 14.4 124 273-399 58-185 (412)
274 PF02487 CLN3: CLN3 protein; 91.8 0.99 2.1E-05 42.6 8.6 65 35-99 329-394 (402)
275 PF13000 Acatn: Acetyl-coenzym 89.7 3.5 7.5E-05 39.9 10.1 23 377-399 202-224 (544)
276 PF06963 FPN1: Ferroportin1 (F 88.5 11 0.00023 36.3 12.8 57 339-395 143-199 (432)
277 PF01733 Nucleoside_tran: Nucl 87.4 0.18 4E-06 46.2 0.1 38 326-363 265-302 (309)
278 PF12832 MFS_1_like: MFS_1 lik 86.5 8.9 0.00019 26.8 8.9 31 262-292 41-71 (77)
279 PF00854 PTR2: POT family; In 86.3 5 0.00011 37.8 9.2 75 321-395 45-122 (372)
280 KOG3574 Acetyl-CoA transporter 83.9 4 8.8E-05 38.1 6.8 25 376-400 216-240 (510)
281 KOG3098 Uncharacterized conser 83.9 31 0.00068 33.4 13.2 99 266-365 60-158 (461)
282 PF06779 DUF1228: Protein of u 83.1 1.5 3.2E-05 31.3 3.0 43 2-44 41-83 (85)
283 PRK03612 spermidine synthase; 78.6 24 0.00052 35.0 10.9 67 47-114 116-185 (521)
284 KOG3880 Predicted small molecu 77.4 12 0.00025 34.1 7.3 76 23-98 324-400 (409)
285 PRK03612 spermidine synthase; 74.8 46 0.001 33.1 11.7 39 344-382 144-183 (521)
286 KOG1479 Nucleoside transporter 70.5 1E+02 0.0022 29.4 19.3 32 326-357 360-391 (406)
287 KOG4332 Predicted sugar transp 69.3 25 0.00055 31.4 7.3 22 273-294 89-110 (454)
288 PF06779 DUF1228: Protein of u 61.1 58 0.0013 23.3 6.8 45 264-308 35-79 (85)
289 PF06912 DUF1275: Protein of u 61.1 1E+02 0.0022 26.1 10.1 28 80-107 166-193 (209)
290 TIGR00939 2a57 Equilibrative N 59.0 38 0.00082 32.8 7.3 61 39-99 370-431 (437)
291 PF11947 DUF3464: Protein of u 58.1 44 0.00095 26.9 6.2 81 278-358 56-143 (153)
292 COG3202 ATP/ADP translocase [E 51.8 2.5E+02 0.0053 27.6 24.4 96 5-101 79-209 (509)
293 COG5336 Uncharacterized protei 48.4 76 0.0017 23.7 5.6 54 340-393 37-92 (116)
294 PF07672 MFS_Mycoplasma: Mycop 42.7 1.6E+02 0.0034 26.3 7.8 89 3-92 156-255 (267)
295 PF11947 DUF3464: Protein of u 41.3 1.2E+02 0.0027 24.3 6.4 80 10-91 56-145 (153)
296 KOG3880 Predicted small molecu 39.5 44 0.00096 30.5 4.0 109 15-131 91-203 (409)
297 PF01733 Nucleoside_tran: Nucl 37.7 14 0.00029 33.9 0.6 60 39-98 246-306 (309)
298 COG3202 ATP/ADP translocase [E 36.2 4.3E+02 0.0094 26.0 16.8 42 329-370 168-209 (509)
299 KOG2601 Iron transporter [Inor 35.6 4E+02 0.0087 25.4 9.6 57 335-391 165-221 (503)
300 KOG2765 Predicted membrane pro 35.5 2.2E+02 0.0047 26.8 7.7 14 99-112 36-49 (416)
301 KOG1479 Nucleoside transporter 35.0 1E+02 0.0022 29.3 5.9 61 38-98 340-401 (406)
302 PF10183 ESSS: ESSS subunit of 35.0 77 0.0017 23.7 4.2 30 101-130 55-85 (105)
303 KOG3097 Predicted membrane pro 34.8 69 0.0015 29.6 4.5 54 3-57 73-126 (390)
304 KOG0637 Sucrose transporter an 34.5 43 0.00092 32.4 3.3 43 321-363 154-197 (498)
305 PF11151 DUF2929: Protein of u 33.7 1.4E+02 0.003 19.5 5.9 30 101-130 27-56 (57)
306 PF10225 DUF2215: Uncharacteri 33.4 3.2E+02 0.0069 24.2 8.4 22 381-402 104-125 (249)
307 COG4291 Predicted membrane pro 32.5 97 0.0021 26.0 4.6 17 125-141 65-82 (228)
308 COG5336 Uncharacterized protei 29.7 1.7E+02 0.0037 21.9 5.0 19 273-291 59-78 (116)
309 PF06341 DUF1056: Protein of u 29.6 1.2E+02 0.0025 20.2 3.7 38 38-75 25-62 (63)
310 KOG1237 H+/oligopeptide sympor 29.3 1.1E+02 0.0025 30.7 5.5 60 40-99 457-517 (571)
311 smart00793 AgrB Accessory gene 28.2 1.4E+02 0.0031 24.8 5.2 24 386-409 109-133 (184)
312 PF04281 Tom22: Mitochondrial 23.2 2.4E+02 0.0051 22.3 5.1 22 335-356 61-82 (137)
313 PF14362 DUF4407: Domain of un 22.7 1.7E+02 0.0037 26.6 5.1 11 70-80 8-18 (301)
314 TIGR00751 menA 1,4-dihydroxy-2 22.5 5.8E+02 0.013 23.0 8.9 18 59-76 120-137 (284)
315 PF11460 DUF3007: Protein of u 22.3 1.5E+02 0.0032 22.1 3.6 29 384-412 44-72 (104)
316 PF04647 AgrB: Accessory gene 21.9 1.8E+02 0.004 24.0 4.8 24 385-408 108-132 (185)
317 PF13829 DUF4191: Domain of un 21.6 2.5E+02 0.0054 24.3 5.3 70 79-151 28-99 (224)
318 PF07857 DUF1632: CEO family ( 21.2 3E+02 0.0066 24.4 6.0 35 331-365 65-99 (254)
319 PRK10697 DNA-binding transcrip 21.0 1.4E+02 0.0029 22.9 3.3 13 120-132 57-69 (118)
No 1
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=2.7e-52 Score=364.51 Aligned_cols=393 Identities=40% Similarity=0.670 Sum_probs=327.8
Q ss_pred CccccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccchhHHHHHHHhhccCCCcchHHHH
Q 015075 1 MLLGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGVPVFLAYFLEFVPVSHRGRWMVA 80 (413)
Q Consensus 1 ~~~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~~~~~~~~~E~~p~~~Rg~~~~~ 80 (413)
|++|+..||.++|++|||+.+.++.+..++...+.+++||+.+++++|.+.|+|.|+.|...++-.|.-|..+|+..+-.
T Consensus 126 mllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is~~spnf~~L~~f~~l~~~g~gg~pv~~~~yle~lp~~~r~~~~V~ 205 (528)
T KOG0253|consen 126 MLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVISGASPNFASLCVFRALWGFGVGGLPVDSAIYLEFLPSSHRWLLTVM 205 (528)
T ss_pred hhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhhcCCCCeehhhHHHHHHhccCCCccHhHHHHHHhccCcCCCcchhH
Confidence 67899999999999999999999999999999999999999999999999999999988888888999999999988877
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHHHHHhhcCCCCchHHhhccChHHHHHHHHHHHHHcCCCCCCC
Q 015075 81 LSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFALLLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPG 160 (413)
Q Consensus 81 ~~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~~~~~~~~pEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~ 160 (413)
. ..|.+|.++...+++..+..+||||.....++|..+.....+++||||||...+|+.++|.+.+++++..|++..|.+
T Consensus 206 ~-~~waig~v~ea~law~vm~~~gwr~~l~~~~~pl~~~a~f~~w~~ESpRf~~~~G~~~kAletL~kiArmNg~qlplg 284 (528)
T KOG0253|consen 206 S-FFWAIGQVFEALLAWGVMSNFGWRYLLFTSSTPLMFAARFLVWVYESPRFYLAKGDDYKALETLHKIARMNGKQLPLG 284 (528)
T ss_pred H-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHHHHHHHhhcccCcchhhhcCChHHHHHHHHHHHHhcCCCCCcc
Confidence 7 999999999999999999999999998888899888888999999999999999999999999999999999988876
Q ss_pred ccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhccchhhhHHHHHHHHHHHHHHHhhhHHhhhhhccCCC
Q 015075 161 ILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGD 240 (413)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 240 (413)
........+.+++....++.+. .. -++.-.....+++++.+++++.+|..++.|.+.||+..+++..+.+..
T Consensus 285 vl~~s~~~~~e~e~~~~~~~~~-------~a-~ke~rg~~~nLlsp~lrkttlllw~iwfgnafsyyg~VLlttelfqsg 356 (528)
T KOG0253|consen 285 VLESSAIDRQEQEESDLDDSKS-------SA-AKEVRGGTTNLLSPKLRKTTLLLWRIWFGNAFSYYGSVLLTTELFQSG 356 (528)
T ss_pred eeeeehhhhhhhhhhchhhhhh-------cc-ccccccchHhhcChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcc
Confidence 5543322222221111111100 00 112223456688999999999999999999999999999888776544
Q ss_pred CccCccccc------c---CCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHH
Q 015075 241 NKCGSKVLH------A---DKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVV 311 (413)
Q Consensus 241 ~~~~~~~~~------~---~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (413)
+.|...... - -......-|.+.++.+++..||.++.++++||+|||+.+..+++..+++.+++....+...
T Consensus 357 d~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~ 436 (528)
T KOG0253|consen 357 DACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNA 436 (528)
T ss_pred CccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcch
Confidence 433222110 0 0111223477888999999999999999999999999999999999998888776554444
Q ss_pred HHHHHHHHHHHhhhhhhhhheecccccccchhhhHHHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHH
Q 015075 312 TTVLLFGVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIAS 391 (413)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 391 (413)
...+++....|..+.+.+.|+|.+|++|+..|+++.|.|.+++++|++++|.++ +....+.+.+..+|+.+++++.+.
T Consensus 437 ~tvllf~arafisg~fqvaYvYtPEVyPTavRatgvGtcSsmaRIggI~~p~iA--~~~e~s~sl~i~vy~~~~ilagIa 514 (528)
T KOG0253|consen 437 YTVLLFTARAFISGAFQVAYVYTPEVYPTAVRATGVGTCSSMARIGGIFSPVIA--MRAELSTSLPIFVYGALFILAGIA 514 (528)
T ss_pred hHHHHHHHHHHHhchheEEEEecCcccchhhhhcchhhhhhHHhhhhhhhhHHH--HHhccceeehHHHHHHHHHHHHHH
Confidence 567788888999999999999999999999999999999999999999999987 444456678899999999999999
Q ss_pred hhcccccccCcch
Q 015075 392 SLLFPFETMGREL 404 (413)
Q Consensus 392 ~~~~~~et~~~~l 404 (413)
+.++|-|||||.+
T Consensus 515 vcffPiEtkGR~l 527 (528)
T KOG0253|consen 515 VCFFPIETKGRSL 527 (528)
T ss_pred heeeeeccCCCCC
Confidence 9999999999986
No 2
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=5.9e-44 Score=355.32 Aligned_cols=401 Identities=24% Similarity=0.419 Sum_probs=289.3
Q ss_pred ccccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHHHH
Q 015075 2 LLGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVA 80 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~ 80 (413)
++|++++|+++||+|||++++++++++++++++++++++++.++++|+++|++.|+. +...++++|++|+++||+..++
T Consensus 216 iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~ 295 (742)
T TIGR01299 216 MVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSW 295 (742)
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999875 7788999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcC-------------CChHHHHHHhhHHHHHHHHHhhcCCCCchHHhhccChHHHHHHHH
Q 015075 81 LSAFWTAGTIFEASLAWVVMTR-------------LNWRWLLAFSSVPSFALLLFYGLAPESPRYLCAKARTVDAHRILE 147 (413)
Q Consensus 81 ~~~~~~~G~~~~~~l~~~l~~~-------------~~Wr~~f~~~~i~~~~~~~~~~~~pEsp~~l~~~~~~~~a~~~~~ 147 (413)
.+.++.+|.++++.+++.+... .+||+++++.++|.++.++..+++||||+|+.+++|.+++.++++
T Consensus 296 ~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESPrwL~~~gr~~eA~~iL~ 375 (742)
T TIGR01299 296 LCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESPRFFLENGKHDEAWMILK 375 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHCCCHHHHHHHHH
Confidence 9999999999999887766532 369999999999988888888899999999999999999999999
Q ss_pred HHHHHcCCCC--CCCccccchhhhhhhhccccccc-cccch----hhhcchhhccccchhhhhccchhhhHHHHHHHHHH
Q 015075 148 KMAFVNQTKL--PPGILVSDKAIKENEESNLLRDT-HMLSM----TRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFF 220 (413)
Q Consensus 148 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (413)
+++..|.+.. +......++.....+..+..+.+ ..... ...........+..++.+++++++++++.+|..++
T Consensus 376 ~i~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~tl~l~~~wf 455 (742)
T TIGR01299 376 LIHDTNMRAKGHPEKVFSVNHIKTIHQEDELIEIESDTGTWYQRCFVRALSEGGGIWGNFLRCFNPEVREITIKLMGVWF 455 (742)
T ss_pred HHhcCCCCCcCchhHHHHHHHHHHhhhhhhhhcccccccchhhcchhhhhhhhhhHHHHHHHHcCccHHHHHHHHHHHHH
Confidence 9887664321 11000000000000000000000 00000 00000011122334667889999999999999999
Q ss_pred HHHHHhhhHHhhhhhccCCC------------C--------------------------------------------ccC
Q 015075 221 ANVFSYYGAVLLTSKLSSGD------------N--------------------------------------------KCG 244 (413)
Q Consensus 221 ~~~~~~~~~~~~~~~l~~~~------------~--------------------------------------------~~~ 244 (413)
+..+.||+...+.+.+.... + .|.
T Consensus 456 ~~~~~yygl~~w~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 535 (742)
T TIGR01299 456 TLSFGYYGLSVWFPDMIKHLQADDYAALTKNFPGDKVAHFSFNFTLENQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECT 535 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccchhccccccchhhhhccccccccchhhcccccccccccccccccc
Confidence 99999999887766431100 0 000
Q ss_pred cccc--------------------------------------------cc----CCCCChhHHHHHHHHHhhhhhHHHHH
Q 015075 245 SKVL--------------------------------------------HA----DKSKDNSLYVDVFIASLAELPGLILS 276 (413)
Q Consensus 245 ~~~~--------------------------------------------~~----~~~~~~~~~~~~~~~~~~~~~g~~~~ 276 (413)
-+.+ +. ........+...++.+++.++|.++.
T Consensus 536 ~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~il~ 615 (742)
T TIGR01299 536 FDDVTSSNTFFKNCTFIDTLFENTDFEEYKFIDSEFQNCSFLHNKEGCPIDFDGDDEGAYMIYFVNFLGTLAVLPGNIVS 615 (742)
T ss_pred eeeccccchhhhccchhhhhccccchhhhhhhhhhhhhccccccCCccCccCCccchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000 00 00000123455667778889999999
Q ss_pred HHHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhhhhhhhhheecccccccchhhhHHHHHHhhhhh
Q 015075 277 AIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKV 356 (413)
Q Consensus 277 g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~ 356 (413)
|+++||+|||++++.+.++.+++++.+.+..+....+++.++..++..+.++..+++++|++|++.|+++.|++++++++
T Consensus 616 g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rl 695 (742)
T TIGR01299 616 ALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELYPSDKRATAFGFLNALCKA 695 (742)
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH
Confidence 99999999999988888777776665554433332333333334444556677889999999999999999999999999
Q ss_pred hHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHhhcccccccCcch
Q 015075 357 GGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETMGREL 404 (413)
Q Consensus 357 ~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~et~~~~l 404 (413)
|++++|++.+.+.+. +...++++++++.+++.++.+++ |||++++|
T Consensus 696 Gaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~ll~~~L-PET~~~~l 741 (742)
T TIGR01299 696 AAVLGILIFGSFVGI-TKAAPILFASAALACGGLLALKL-PDTRGQVL 741 (742)
T ss_pred HHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHhC-CCCccccc
Confidence 999999998877664 34567777777777776766655 89999875
No 3
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=1.8e-42 Score=339.15 Aligned_cols=375 Identities=24% Similarity=0.375 Sum_probs=254.6
Q ss_pred ccccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhccc------HHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCc
Q 015075 2 LLGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPN------YVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHR 74 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~------~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~R 74 (413)
++|++++|+++||+|||+++..+.+++.+++++++++++ ++.++++|+++|++.|+. +....|+.|++|+++|
T Consensus 70 ~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~R 149 (502)
T TIGR00887 70 LAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWR 149 (502)
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhH
Confidence 478899999999999999999999999999999999876 789999999999999975 7778999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhc-----------------------CCChHHHHHHhhHHHHHHHHHhhcCCCCch
Q 015075 75 GRWMVALSAFWTAGTIFEASLAWVVMT-----------------------RLNWRWLLAFSSVPSFALLLFYGLAPESPR 131 (413)
Q Consensus 75 g~~~~~~~~~~~~G~~~~~~l~~~l~~-----------------------~~~Wr~~f~~~~i~~~~~~~~~~~~pEsp~ 131 (413)
|+.+++.+....+|.++++.++..+.. .++||++|.+.++|+++..+.++++||||+
T Consensus 150 g~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpESpr 229 (502)
T TIGR00887 150 GAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLTIPETPR 229 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHHHhCCCCHH
Confidence 999999999999999999888765431 247999999999999888888889999999
Q ss_pred HHhhccChHH-HHHHHHHHHHHcCCCCCCCccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhcc----c
Q 015075 132 YLCAKARTVD-AHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFS----R 206 (413)
Q Consensus 132 ~l~~~~~~~~-a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 206 (413)
|+.+|+|.+| +.+.+++....+ .++ +..+.++.++ +. + ..+ .+++++++ +
T Consensus 230 ~l~~~~~~~~~a~~~~~~~~~~~---~~~------~~~~~~~~~~---~~---~-------~~~---~~~~~l~~~~~~~ 284 (502)
T TIGR00887 230 YTADVAKDVEQAASDMSAVLQVK---IEA------EPDEVEKAST---AV---E-------VPK---ASWSDFFTHFFKW 284 (502)
T ss_pred HHHHhCcchHHHHHHHHHHhccc---ccc------Ccccccchhc---cc---c-------chh---hhHHHHHHHHhhh
Confidence 9999888753 555555443211 000 0000000000 00 0 000 12333332 2
Q ss_pred hhhhHHHHHHHHHHHHHHHhhhHHhhhhhccCCCCccCccccccCCCCCh---------hHHHHHHHHHhhhhhHHHHHH
Q 015075 207 KLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDNKCGSKVLHADKSKDN---------SLYVDVFIASLAELPGLILSA 277 (413)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~g~~~~g 277 (413)
+..+..+..+..++.+.+.+|+...+.+.+... .+....+.+ .......+..+..+++.++.+
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~--------~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 356 (502)
T TIGR00887 285 RHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSA--------IGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTV 356 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHccccccHHHHHH--------HcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444444455555566666654433222111 111111111 011123344456677889999
Q ss_pred HHHHHhChhHHHHHHHHHHHHHHHHHHhc--c--hhHHHHHHHHHHHHHhhhhhhhhheecccccccchhhhHHHHHHhh
Q 015075 278 IIVDKIGRKLSMVLMFVSACIFLLPLVFH--Q--SAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSL 353 (413)
Q Consensus 278 ~l~dr~grr~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~ 353 (413)
+++||+|||+.++.+..+..+.+..+... . +........+...++..+..++.+.+.+|++|++.|+++.|+++.+
T Consensus 357 ~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~ 436 (502)
T TIGR00887 357 FLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAAS 436 (502)
T ss_pred HHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHH
Confidence 99999999998877666555443333221 1 1111111111122233455667888999999999999999999999
Q ss_pred hhhhHhHHHHHHHHHhhcc----------chhHHHHHHHHHHHHHHHHhhcccccccCcchhhhhhh
Q 015075 354 GKVGGMVCPLVAVGLVTSC----------HLRLAVILFEVVFVLAIASSLLFPFETMGRELKDTVDA 410 (413)
Q Consensus 354 ~~~~~~~~p~~~~~l~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~et~~~~l~~~~~~ 410 (413)
++++++++|.+.+++.+.. +...++++++++++++.+.. ++.|||++|++||.++|
T Consensus 437 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~-~~lpEt~~~~leei~~~ 502 (502)
T TIGR00887 437 GKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILFT-LLIPETKGKSLEELSGE 502 (502)
T ss_pred hhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHHh-eEeccCCCCCHHhhhCC
Confidence 9999999999999887732 22356777888777776654 56689999999887654
No 4
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.6e-42 Score=321.35 Aligned_cols=373 Identities=21% Similarity=0.338 Sum_probs=273.7
Q ss_pred ccccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhh---cccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchH
Q 015075 2 LLGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSF---SPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRW 77 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~---a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~ 77 (413)
++|+++.|+++||+|||..+.++.++..++.++..+ ++++++++++|++.|+..|.. ....-|+.|.+|++.||..
T Consensus 74 ~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~ 153 (485)
T KOG0569|consen 74 MIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLTEISPKNLRGAL 153 (485)
T ss_pred HHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHH
Confidence 478999999999999999999999998888877665 568999999999999998865 4556789999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH--HhcCCChHHHHHHhhHHHHHHHHHhhcCCCCchHHhh-ccChHHHHHHHHHHHHHcC
Q 015075 78 MVALSAFWTAGTIFEASLAWV--VMTRLNWRWLLAFSSVPSFALLLFYGLAPESPRYLCA-KARTVDAHRILEKMAFVNQ 154 (413)
Q Consensus 78 ~~~~~~~~~~G~~~~~~l~~~--l~~~~~Wr~~f~~~~i~~~~~~~~~~~~pEsp~~l~~-~~~~~~a~~~~~~~~~~~~ 154 (413)
..+.+.+..+|.+++..++.. +.+...|++.+....+|.++..+...++|||||||.. |+|.+||+|.++++++.++
T Consensus 154 g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~ 233 (485)
T KOG0569|consen 154 GTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLPFLPESPKYLLIKKGDEEEARKALKFYRGKED 233 (485)
T ss_pred HHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCc
Confidence 999999999999998776654 3356679999999999999999999999999999988 8999999999988875432
Q ss_pred CCCCCCccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhcc-chhhhHHHHHHHHHHHHHH------Hhh
Q 015075 155 TKLPPGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFS-RKLIRTTLLLWVLFFANVF------SYY 227 (413)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~------~~~ 227 (413)
.+. +.+.+.++.++ + +..++...+++++++ ++.++...+...+.+.+++ .+|
T Consensus 234 ~~~-------~~e~~~~e~~~----~----------~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Y 292 (485)
T KOG0569|consen 234 VEA-------EIEEMLREIEE----E----------ELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFY 292 (485)
T ss_pred chh-------HHHHHHHHHHH----h----------ccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHH
Confidence 110 00000011000 0 000112234455444 4555554444444444333 344
Q ss_pred hHHhhhhhccCCCCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHh--
Q 015075 228 GAVLLTSKLSSGDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVF-- 305 (413)
Q Consensus 228 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~-- 305 (413)
...++.+.- . ..+...+ .....+....+.++++.+++||.|||+.++.++..+.+..+.+..
T Consensus 293 st~i~~~aG-------------~--~~~~a~~-an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~ 356 (485)
T KOG0569|consen 293 STSIFKTAG-------------F--TPEEAQY-ANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIAL 356 (485)
T ss_pred HHHHHHHcC-------------C--CHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 444333211 1 1111222 234556677889999999999999999999887777655544432
Q ss_pred --cchh--HH----HHHHHHHHHHHhhhhhhhhheecccccccchhhhHHHHHHhhhhhhHhHHHHHHHHHhhccchhHH
Q 015075 306 --HQSA--VV----TTVLLFGVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLA 377 (413)
Q Consensus 306 --~~~~--~~----~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~ 377 (413)
.+.. +. ....+.....+..|..+++|.+.+|++|++.|+.+.+++..+.++++++..+..+.+.+..+. ..
T Consensus 357 ~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~ 435 (485)
T KOG0569|consen 357 FLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YV 435 (485)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hh
Confidence 1111 11 122222233455678899999999999999999999999999999999998888888777766 67
Q ss_pred HHHHHHHHHHHHHHhhcccccccCcchhhhhhhhc
Q 015075 378 VILFEVVFVLAIASSLLFPFETMGRELKDTVDAIE 412 (413)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~et~~~~l~~~~~~~~ 412 (413)
+++|.+.+++..+..++++||||||+.+|+.++.|
T Consensus 436 filF~i~~~~~~i~~~~~lPETkgr~~~eI~~~~~ 470 (485)
T KOG0569|consen 436 FILFVIPLAIFLIYLYRYLPETKGRTPYEIIEELE 470 (485)
T ss_pred hHHHHHHHHHHHHHHHHhCcccCCCCHHHHHHHHH
Confidence 88999999999999999999999999999998866
No 5
>TIGR00898 2A0119 cation transport protein.
Probab=100.00 E-value=5.5e-40 Score=322.67 Aligned_cols=361 Identities=34% Similarity=0.634 Sum_probs=271.2
Q ss_pred ccccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHHHH
Q 015075 2 LLGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVA 80 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~ 80 (413)
++|++++|+++||+|||++++.+.++.+++.+++++++|++.++++|++.|++.|+. +....++.|++|+++|++..++
T Consensus 141 ~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~ 220 (505)
T TIGR00898 141 LLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTL 220 (505)
T ss_pred HHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhhccchHHHHHHHhheecChhhhHHHHHH
Confidence 578899999999999999999999999999999999999999999999999999884 7778899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHHHHHhhcCCCCchHHhhccChHHHHHHHHHHHHHcCCCCCCC
Q 015075 81 LSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFALLLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPG 160 (413)
Q Consensus 81 ~~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~~~~~~~~pEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~ 160 (413)
.+.++.+|.++++.+++.+. +||+.|++.+++.++..+..+++||||+|+..+++.+++++.+++.++.|+.+.+++
T Consensus 221 ~~~~~~~g~~~~~~~~~~~~---~wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~ 297 (505)
T TIGR00898 221 IQVFFSLGLVLLPLVAYFIP---DWRWLQLAVSLPTFLFFLLSWFVPESPRWLISQGRIEEALKILQRIAKINGKKLPAE 297 (505)
T ss_pred HHHHHHHHHHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHH
Confidence 99999999999998887764 499999999999887777778899999999999999999999988887765432211
Q ss_pred ccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhc-cchhhhHHHHHHHHHHHHHHHhhhHHhhhhhccCC
Q 015075 161 ILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLF-SRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSG 239 (413)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 239 (413)
. .+.+.+++ .+ ..+ ....++.++ +++.++..+..+..++...+.||+..++.+.+.
T Consensus 298 ~------~~~~~~~~----~~----------~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 354 (505)
T TIGR00898 298 V------LSLSLEKD----LS----------SSK-KQYSFLDLFRTPNLRKTTLCLMMLWFTTAFSYYGLVLDLGNLG-- 354 (505)
T ss_pred H------Hhhhhhhh----hh----------hcc-CCCcHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHhccccccC--
Confidence 0 00000000 00 000 012334444 345555555666666666667766554432211
Q ss_pred CCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchh--HHHHHHHH
Q 015075 240 DNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSA--VVTTVLLF 317 (413)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 317 (413)
.+.+....+.++..+++.++.+++.||+|||+.+..+.++.++.++.+....+. .......+
T Consensus 355 ----------------~~~~~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 418 (505)
T TIGR00898 355 ----------------GNIYLDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAV 418 (505)
T ss_pred ----------------CChHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHH
Confidence 123455566777888999999999999999999888777766655544432222 22223333
Q ss_pred HHHHHhhhhhhhhheecccccccchhhhHHHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHhhcccc
Q 015075 318 GVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPF 397 (413)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (413)
...++..+.++..+.+.+|++|++.|+++.|+.+.++++|++++|.+.+ + +..+...++++++++.+++.+..++ .|
T Consensus 419 ~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~-lp 495 (505)
T TIGR00898 419 LGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-L-GEKWLFLPLVLFGGLALLAGILTLF-LP 495 (505)
T ss_pred HHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-H-HHHHHhhHHHHHHHHHHHHHHHHHc-Cc
Confidence 3344445556778889999999999999999999999999999999877 3 4445566788888888777666655 57
Q ss_pred cccCcchhhh
Q 015075 398 ETMGRELKDT 407 (413)
Q Consensus 398 et~~~~l~~~ 407 (413)
||++++++|+
T Consensus 496 et~~~~l~~t 505 (505)
T TIGR00898 496 ETKGVPLPET 505 (505)
T ss_pred CCCCCCCCCC
Confidence 9999999874
No 6
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=7e-38 Score=308.44 Aligned_cols=372 Identities=29% Similarity=0.439 Sum_probs=276.2
Q ss_pred ccccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHHHH
Q 015075 2 LLGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVA 80 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~ 80 (413)
++|++++|+++||+|||++++.++++..++.+++++++|++.++++|+++|++.++. .+...++.|+.++++|+.+..+
T Consensus 132 ~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~ 211 (521)
T KOG0255|consen 132 LVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQRGLALTL 211 (521)
T ss_pred HHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhHHhHhhheeecCcchhhHHHHH
Confidence 589999999999999999999999999999999999999999999999999988775 6778889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHHHHHhhcCCCCchHHhhccChHHHHHHHHHHHHHcCCCCCCC
Q 015075 81 LSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFALLLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPG 160 (413)
Q Consensus 81 ~~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~~~~~~~~pEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~ 160 (413)
......|..++++.++.+.. +||+.+++..+|.++.++.+++.||||||+..++|.+++++.+++.++.|+++....
T Consensus 212 -~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~~~l~~Es~rwl~~~g~~~~a~~~l~~~a~~n~~~~~~~ 288 (521)
T KOG0255|consen 212 -GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLLWFLPPESPRWLLSKGRIDEAIKILKKIAKLNGRKLSVK 288 (521)
T ss_pred -HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHccCcChHHHHHcCchHHHHHHHHHHHhhcCCCCCcH
Confidence 44444555555555555554 999999999999988777777778999999999999999999999998874332211
Q ss_pred ccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhcc-chhhhHHHHHHHHHHHHHHHhhhHHhhhhhccCC
Q 015075 161 ILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFS-RKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSG 239 (413)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 239 (413)
. ..+... ...++ ......+...+.+++. ++.++..+..++.++.....||+..+....+
T Consensus 289 ~-----~~~~~~--~~~~~----------~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~y~gl~~~~~~l--- 348 (521)
T KOG0255|consen 289 E-----LLRLEL--LLRPL----------KLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFVFSLVYYGLSLNVSGL--- 348 (521)
T ss_pred H-----HHHHHH--HhhHh----------hhhccCCCCchhhhhcCHHHHHHHHHHHHHHHHHhHHHHhhhhhhhhc---
Confidence 0 000000 00000 0000111123444443 4477777777888887888888877655432
Q ss_pred CCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhc--chh-HHHHHHH
Q 015075 240 DNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFH--QSA-VVTTVLL 316 (413)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~ 316 (413)
..+.+.+..+.+....++....+...|+.|||.....+.+...+.++..... ... .......
T Consensus 349 ---------------g~~~~~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (521)
T KOG0255|consen 349 ---------------GGNIYLNFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILP 413 (521)
T ss_pred ---------------CchHHHHHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHH
Confidence 2345666777777888898999999999999999888887776665554432 121 1222333
Q ss_pred HHHHHHhhhhhhhhheecccccccchhhhHHHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHhhccc
Q 015075 317 FGVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFP 396 (413)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (413)
....++....+...+.+.+|++|+..|+++.+.++.+++++++++|.+...... ......+.+++....+.++...++.
T Consensus 414 ~~~~~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~l 492 (521)
T KOG0255|consen 414 LLGKFFIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQ-MFPLLGLILFGWLALLLGLLSLLLL 492 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hcccchHHHHHHHHHHHHHHHHhcC
Confidence 333444445556669999999999999999999999999999999987643322 3333444446777777777787778
Q ss_pred ccccCcchhhhhhhhc
Q 015075 397 FETMGRELKDTVDAIE 412 (413)
Q Consensus 397 ~et~~~~l~~~~~~~~ 412 (413)
|||++++++|+.+|.|
T Consensus 493 pet~~~~l~~t~~~~~ 508 (521)
T KOG0255|consen 493 PETKGKPLPGTLLDAE 508 (521)
T ss_pred cccCCCCCchhHHHHH
Confidence 9999999999998877
No 7
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=2.2e-37 Score=303.41 Aligned_cols=378 Identities=19% Similarity=0.300 Sum_probs=265.7
Q ss_pred ccccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHHHH
Q 015075 2 LLGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVA 80 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~ 80 (413)
.+|+++.|+++|++|||+++..+.+++.++++++++++|+.+++++|+++|+|.|+. .....|++|..|++.||...+.
T Consensus 103 ~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~ 182 (513)
T KOG0254|consen 103 LVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSL 182 (513)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHH
Confidence 468899999999999999999999999999999999999999999999999999986 4567899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcC-CChHHHHHHhhHHHHHHHHHhhcCCCCchHHhhccChHHHHHHHHHHHHHcCCCCCC
Q 015075 81 LSAFWTAGTIFEASLAWVVMTR-LNWRWLLAFSSVPSFALLLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPP 159 (413)
Q Consensus 81 ~~~~~~~G~~~~~~l~~~l~~~-~~Wr~~f~~~~i~~~~~~~~~~~~pEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~ 159 (413)
.+....+|..++..++....+. ++||..+.+..+|+++..+..+++||||+|+.++++.+++++.+++++..++.+
T Consensus 183 ~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g~~~~a~~~l~~l~g~~~~~--- 259 (513)
T KOG0254|consen 183 YQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIPAVILALGMLFLPESPRWLIEKGRLEEAKRSLKRLRGLSPED--- 259 (513)
T ss_pred HHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHcCChHHHHHHHHHHhCCCCcc---
Confidence 9999999999986666554332 589999999999998887778999999999999999999999999987643111
Q ss_pred CccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhccchhhhHHHHHHHHHHHHHHH-hhhHHhhhhhccC
Q 015075 160 GILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFS-YYGAVLLTSKLSS 238 (413)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~ 238 (413)
.+.+.++.+.. ... + . ........+.+++.++..++......+...++++ +....++.+.+..
T Consensus 260 ------~~~~~~~~~~~--~~~--~-----~-~~~~~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~ 323 (513)
T KOG0254|consen 260 ------VEVELELLKIK--LLV--E-----A-EVAEGKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFK 323 (513)
T ss_pred ------hHHHHHHHHHH--HHH--h-----h-hcccccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHH
Confidence 11111111100 000 0 0 0000001244455555555555444433333332 2222222222211
Q ss_pred CCCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHh----cch------
Q 015075 239 GDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVF----HQS------ 308 (413)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~----~~~------ 308 (413)
. ...++.. .....+.++...++++++.++.||+|||+.++.+.....+..+.+.. ...
T Consensus 324 ~-----------~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~ 391 (513)
T KOG0254|consen 324 S-----------AGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSK 391 (513)
T ss_pred h-----------cCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCccc
Confidence 1 1111111 34456667777888899999999999999998877665554443321 110
Q ss_pred --hHHH-HHHHHHHHHHhhhhhhhhheecccccccchhhhHHHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHHHHHHH
Q 015075 309 --AVVT-TVLLFGVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVF 385 (413)
Q Consensus 309 --~~~~-~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~ 385 (413)
.+.. ....+....+..+..+++|.+.+|++|.+.|+.+.+++..++++.++........+....+....+.+|...+
T Consensus 392 ~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~~~~~f~~f~~~~ 471 (513)
T KOG0254|consen 392 GAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEALGIGGTFGYFGGIC 471 (513)
T ss_pred chhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHH
Confidence 1112 2222333345566778899999999999999999999999999988877666555544432245677777777
Q ss_pred HHHHH-HhhcccccccCcchhhhhhh
Q 015075 386 VLAIA-SSLLFPFETMGRELKDTVDA 410 (413)
Q Consensus 386 ~~~~~-~~~~~~~et~~~~l~~~~~~ 410 (413)
.+..+ .++++.||||++++||.++.
T Consensus 472 ~~~~~~fv~~~~pETkg~sleei~~~ 497 (513)
T KOG0254|consen 472 LLSLIIFVFFFVPETKGLTLEEINEL 497 (513)
T ss_pred HHHHHHHheEEcccCCCCcHHHHHHH
Confidence 77767 78888999999999998864
No 8
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=100.00 E-value=4.9e-44 Score=346.53 Aligned_cols=372 Identities=26% Similarity=0.468 Sum_probs=259.3
Q ss_pred ccccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcc---cHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchH
Q 015075 2 LLGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSP---NYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRW 77 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~---~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~ 77 (413)
++|++++|+++||+|||+++..+.++..+++++.++++ |++.++++|+++|++.|+. +....|+.|..|+++||+.
T Consensus 60 ~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~ 139 (451)
T PF00083_consen 60 IVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFL 139 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 58999999999999999999999999999999999999 9999999999999999985 6778899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC---CChHHHHHHhhHHHHHHHHHhhcCCCCchHHhhccChHHHHHHHHHHHHHcC
Q 015075 78 MVALSAFWTAGTIFEASLAWVVMTR---LNWRWLLAFSSVPSFALLLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQ 154 (413)
Q Consensus 78 ~~~~~~~~~~G~~~~~~l~~~l~~~---~~Wr~~f~~~~i~~~~~~~~~~~~pEsp~~l~~~~~~~~a~~~~~~~~~~~~ 154 (413)
..+.+.++.+|.+++..++....+. .+||+.+++..+|.++..+...++||||+|+.+|+|.+||++.+++.++.+.
T Consensus 140 ~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~ 219 (451)
T PF00083_consen 140 SSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLRFFLPESPRWLLSKGRDEEAEKVLRKLRGKEI 219 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccceeccccccccccccccccccccc
Confidence 9999999999999888777665443 4599999999999988877888999999999999999999998877543311
Q ss_pred CCCCCCccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhccc-hhhhHHHHHHHHHHHHHHHh-hhHHhh
Q 015075 155 TKLPPGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFSR-KLIRTTLLLWVLFFANVFSY-YGAVLL 232 (413)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~ 232 (413)
++. |.+++.+..++.+ +.+ .++++++++ +++++......+.....+.. +....+
T Consensus 220 ~~~-----------~~~~~~~~~~~~~----------~~~---~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~ 275 (451)
T PF00083_consen 220 EDE-----------EIEEIKAEKKESQ----------ESK---ASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYY 275 (451)
T ss_pred ccc-----------ccccccccccccc----------ccc---eeeeecccccccccccccccccccccccccccccccc
Confidence 110 0000000000000 000 122333332 22222222222222222221 112222
Q ss_pred hhhccCCCCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHH-----hcc
Q 015075 233 TSKLSSGDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLV-----FHQ 307 (413)
Q Consensus 233 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~-----~~~ 307 (413)
.+.+.... +... . .....+..+...++.+++.+++||+|||+..+.+...+.++...+. ...
T Consensus 276 ~~~i~~~~--------~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~ 342 (451)
T PF00083_consen 276 SPSIFENA--------GISN---S--FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVS 342 (451)
T ss_pred cccccccc--------cccc---c--cccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 22111110 0000 1 1223344555667778888999999999888777766555444332 111
Q ss_pred h----hHHHHHHHHHH-HHHhhhhhhhhheecccccccchhhhHHHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHHHH
Q 015075 308 S----AVVTTVLLFGV-RMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFE 382 (413)
Q Consensus 308 ~----~~~~~~~~~~~-~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~ 382 (413)
+ ......+.... ..+..+..+..+.+.+|++|++.|+++.|+++.+++++++++|.+.+.+.+..+....+.++.
T Consensus 343 ~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~ 422 (451)
T PF00083_consen 343 SSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFA 422 (451)
T ss_pred cccccccccceeeeeccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhH
Confidence 1 11111112111 223335667788999999999999999999999999999999988877776655456778888
Q ss_pred HHHHHHHHHhhcccccccCcchhhhhhh
Q 015075 383 VVFVLAIASSLLFPFETMGRELKDTVDA 410 (413)
Q Consensus 383 ~~~~~~~~~~~~~~~et~~~~l~~~~~~ 410 (413)
++++++.++.++++||||+|++||++++
T Consensus 423 ~~~~i~~i~~~~~lpET~g~~l~ei~~~ 450 (451)
T PF00083_consen 423 GVCLIAIIFVYFFLPETKGKTLEEIQEM 450 (451)
T ss_pred HHHHHHHhheeEEEeeCCCCCHHHHHhh
Confidence 8888888889999999999999999875
No 9
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=2.1e-36 Score=295.28 Aligned_cols=347 Identities=20% Similarity=0.260 Sum_probs=222.8
Q ss_pred ccccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHH--------HHHHHHHhhhcccch-hHHHHHHHhhccCC
Q 015075 2 LLGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVS--------LVIFRCFVGVGLGGV-PVFLAYFLEFVPVS 72 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~--------l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~ 72 (413)
.+|++++|+++||+|||+++..++++++++++++++++|+++ ++++|+++|++.|+. +...+++.|++|++
T Consensus 71 ~ig~~~~G~l~Dr~Grr~~l~~~~~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~ 150 (490)
T PRK10642 71 PLGGLFFGMLGDKYGRQKILAITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDR 150 (490)
T ss_pred HHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCC
Confidence 378999999999999999999999999999999999999975 899999999999986 67789999999999
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHh--------cCCChHHHHHHhhHHHHHHHHHhhcCCCCchHHhhccChHHHHH
Q 015075 73 HRGRWMVALSAFWTAGTIFEASLAWVVM--------TRLNWRWLLAFSSVPSFALLLFYGLAPESPRYLCAKARTVDAHR 144 (413)
Q Consensus 73 ~Rg~~~~~~~~~~~~G~~~~~~l~~~l~--------~~~~Wr~~f~~~~i~~~~~~~~~~~~pEsp~~l~~~~~~~~a~~ 144 (413)
+||+..++.+.+..+|..+++.+...+. ..+|||+.|++.+++.++.++++..+||||+|..++++.++..
T Consensus 151 ~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~~~~~~~~~esp~~~~~~~~~~~~~- 229 (490)
T PRK10642 151 KRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGIIGLYLRHALEETPAFQQHVDKLEQGD- 229 (490)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHHHHHHHHcCCCChhHHHHHHhhhhhc-
Confidence 9999999999888889888876654432 3689999999987766666666778999999864332111000
Q ss_pred HHHHHHHHcCCCCCCCccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhccchhhhHHHHHHHHHHHHHH
Q 015075 145 ILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVF 224 (413)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (413)
++ ... +. .+ ..++.++++ ..+.....+...+....
T Consensus 230 ---------~~----------------~~~----~~------------~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~ 264 (490)
T PRK10642 230 ---------RE----------------GLQ----DG------------PK---VSFKEIATK-HWRSLLTCIGLVIATNV 264 (490)
T ss_pred ---------cc----------------ccc----cc------------cc---CCHHHHHHH-hHHHHHHHHHHHHHHHH
Confidence 00 000 00 00 011222222 12222222223333344
Q ss_pred HhhhHHhhhhhccCCCCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHH-H
Q 015075 225 SYYGAVLLTSKLSSGDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLP-L 303 (413)
Q Consensus 225 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~-~ 303 (413)
.+|+...+.+.+.. ..++.+.. ..........++.+++.++.|+++||+|||+.+..+.+...+..+. +
T Consensus 265 ~~~~~~~~~p~~l~-------~~~g~s~~---~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~ 334 (490)
T PRK10642 265 TYYMLLTYMPSYLS-------HNLHYSED---HGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAF 334 (490)
T ss_pred HHHHHHHHHHHHHH-------HhcCCCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 45544333322211 01111111 1112233345556778888999999999999877665433222111 1
Q ss_pred H-h-cchhHHHHHHHHHHHHHhhhhhhhhheecccccccchhhhHHHHHHhhhhhhHhHHHHHHHHHhhccc-hhHHHHH
Q 015075 304 V-F-HQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCH-LRLAVIL 380 (413)
Q Consensus 304 ~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~-~~~~~~~ 380 (413)
. . ..+........+...++.....+....+.+|++|++.|+++.|+.+.++++++.++|.+.+++.+..+ ...++++
T Consensus 335 ~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~ 414 (490)
T PRK10642 335 ILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYY 414 (490)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHH
Confidence 1 1 22222222222222222233345556677899999999999999999999989999999988876543 2344455
Q ss_pred HHHHHHHHHHHhhcccccccCcchh
Q 015075 381 FEVVFVLAIASSLLFPFETMGRELK 405 (413)
Q Consensus 381 ~~~~~~~~~~~~~~~~~et~~~~l~ 405 (413)
..++++++.+..++ .|||+++.++
T Consensus 415 ~~~~~~i~~~~~~~-~pes~~~~~~ 438 (490)
T PRK10642 415 LMVVAVIGLITGVT-MKETANRPLK 438 (490)
T ss_pred HHHHHHHHHHHHHH-hccccCCCCC
Confidence 55555555555554 5899887664
No 10
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=100.00 E-value=5.6e-36 Score=292.44 Aligned_cols=373 Identities=19% Similarity=0.242 Sum_probs=241.0
Q ss_pred ccccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhc------------ccHHHHHHHHHHhhhcccch-hHHHHHHHhh
Q 015075 2 LLGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFS------------PNYVSLVIFRCFVGVGLGGV-PVFLAYFLEF 68 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a------------~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~ 68 (413)
++|++++|+++||+|||+++..+.+++.++.++++++ +++..++++|+++|++.|+. +...++++|+
T Consensus 69 ~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~ 148 (479)
T PRK10077 69 IIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEI 148 (479)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhh
Confidence 4788999999999999999999999999998888763 22567899999999999985 7778899999
Q ss_pred ccCCCcchHHHHHHHHHHHHHHHHHHHHHHHh--------cCCChHHHHHHhhHHHHHHHHHhhcCCCCchHHhhccChH
Q 015075 69 VPVSHRGRWMVALSAFWTAGTIFEASLAWVVM--------TRLNWRWLLAFSSVPSFALLLFYGLAPESPRYLCAKARTV 140 (413)
Q Consensus 69 ~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~l~--------~~~~Wr~~f~~~~i~~~~~~~~~~~~pEsp~~l~~~~~~~ 140 (413)
+|+++||+.+++.+.+..+|.++++.+++.+. +.+|||+.|++.+++.++..+..+++||+|+|+.++++.+
T Consensus 149 ~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~ 228 (479)
T PRK10077 149 APAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLMLLYFVPETPRYLMSRGKQE 228 (479)
T ss_pred CChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHcCCHH
Confidence 99999999999999999999999887766543 3579999999998888777667788999999998888887
Q ss_pred HHHHHHHHHHHHcCCCCCCCccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhccchhhhHHHHHHHHHH
Q 015075 141 DAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFF 220 (413)
Q Consensus 141 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (413)
++++..++....+ +.+.+.++.++..+ . ++.+ .+..+...............+
T Consensus 229 ~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~---------~--~~~~-----~~~~~~~~~~~~~~~~~~~~~ 281 (479)
T PRK10077 229 QAEGILRKIMGNT-----------LATQALQEIKHSLD---------H--GRKT-----GGKLLMFGVGVIVIGVMLSVF 281 (479)
T ss_pred HHHHHHHHHcCCh-----------hHHHHHHHHHHHHH---------H--hhhh-----hhhhcchhHHHHHHHHHHHHH
Confidence 7766655542110 00000000000000 0 0000 000010000000000011111
Q ss_pred HHHHHhhhHHhhhhhccCCCCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHH
Q 015075 221 ANVFSYYGAVLLTSKLSSGDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFL 300 (413)
Q Consensus 221 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~ 300 (413)
.+...++....+.+.+... .+.... .........++..+++.++.++++||+|||+.++.+.+...+..
T Consensus 282 ~~~~~~~~~~~~~p~i~~~--------~g~~~~---~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~ 350 (479)
T PRK10077 282 QQFVGINVVLYYAPEIFKT--------LGASTD---IALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGM 350 (479)
T ss_pred HHHhChhHHHHHHHHHHHH--------cCCCCc---hHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHH
Confidence 1111111211121111100 111111 11223344566677889999999999999998887776655443
Q ss_pred HHHHh--cch--hHHHHHHHHHHHH-HhhhhhhhhheecccccccchhhhHHHHHHhhhhhhHhHHHHHHHHHh------
Q 015075 301 LPLVF--HQS--AVVTTVLLFGVRM-CVTGTITVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLV------ 369 (413)
Q Consensus 301 ~~~~~--~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~------ 369 (413)
+.+.. ..+ ............. +..+..+..+.+.+|++|++.|+++.|+++.++++++++++.+.+.+.
T Consensus 351 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~ 430 (479)
T PRK10077 351 FSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLV 430 (479)
T ss_pred HHHHHHHhcCcccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchh
Confidence 33321 111 1111111111111 112233567889999999999999999999999999999987766443
Q ss_pred hccchhHHHHHHHHHHHHHHHHhhcccccccCcchhhhhhhhc
Q 015075 370 TSCHLRLAVILFEVVFVLAIASSLLFPFETMGRELKDTVDAIE 412 (413)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~et~~~~l~~~~~~~~ 412 (413)
+..+....+++++++++++.+..+++.||||+|++||.+++.+
T Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 473 (479)
T PRK10077 431 AHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEEMEALWE 473 (479)
T ss_pred hhccCccHHHHHHHHHHHHHHHHHhccccCCCCCHHHHHHHHh
Confidence 3444556777888887888888888889999999998776643
No 11
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2e-37 Score=279.52 Aligned_cols=376 Identities=23% Similarity=0.347 Sum_probs=260.2
Q ss_pred ccccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhccc-------HHHHHHHHHHhhhcccch-hHHHHHHHhhccCCC
Q 015075 2 LLGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPN-------YVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSH 73 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~-------~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~ 73 (413)
++||+++|+++||+|||+++...+++..++++++++... ..++.+.|++.|+|.|+. |...+..+|.+-.+.
T Consensus 98 i~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~ 177 (538)
T KOG0252|consen 98 IFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKT 177 (538)
T ss_pred HHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhcc
Confidence 579999999999999999999999999999998877542 578999999999999994 888888999999999
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhc-------C--------CChHHHHHHhhHHHHHHHHHhhcCCCCchHHhhcc-
Q 015075 74 RGRWMVALSAFWTAGTIFEASLAWVVMT-------R--------LNWRWLLAFSSVPSFALLLFYGLAPESPRYLCAKA- 137 (413)
Q Consensus 74 Rg~~~~~~~~~~~~G~~~~~~l~~~l~~-------~--------~~Wr~~f~~~~i~~~~~~~~~~~~pEsp~~l~~~~- 137 (413)
||...+.......+|.+.|.+++..+.. . .=||..|-++.+|++..+..++.+|||++|-....
T Consensus 178 RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl~M~Et~~Y~al~~~ 257 (538)
T KOG0252|consen 178 RGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRLKMPETARYTALVSK 257 (538)
T ss_pred ccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhHHHHhhc
Confidence 9999988888888888877776665432 1 12999999999999999999999999999863332
Q ss_pred ChHHHHHHHHHHHHHcCCCCCCCccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhccchhhhHHHHHHH
Q 015075 138 RTVDAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWV 217 (413)
Q Consensus 138 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (413)
+.+.|. ...+++.+. +.+.++..+ ++.+ ..+.....+-..+..++-+..+....
T Consensus 258 ~~~~a~-------~d~~k~~~~-------~~~~~~~~~--~~~~----------~~~~~~~~F~~~f~~~hg~~Llgt~~ 311 (538)
T KOG0252|consen 258 KLKQAA-------GDMKKVLSV-------DIEAESTAE--SDVP----------PPSNSFGLFSRLFLRWHGKHLLGTAG 311 (538)
T ss_pred CHhhhh-------hcccccccc-------ccchhhccc--cCCC----------CcccccchHHHHHHHHHHHHHHHHHH
Confidence 222221 111111111 011111100 0000 00111111222222223333344445
Q ss_pred HHHHHHHHhhhHHhhhhhccCCCCccCccccccCCCCCh------hHHHHHHHHHhhhhhHHHHHHHHHHHhChhHHHHH
Q 015075 218 LFFANVFSYYGAVLLTSKLSSGDNKCGSKVLHADKSKDN------SLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVL 291 (413)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~ 291 (413)
.||..-+.+|+..++.+.+.+..+ ..+.++. ....+..+.....+||..+..+++|++|||...+.
T Consensus 312 ~WFllDiafy~~nL~~s~I~~~ig--------~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~ 383 (538)
T KOG0252|consen 312 TWFLLDIAFYGQNLFQSVIFSAIG--------VIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLM 383 (538)
T ss_pred HHHhhhhhhhccccHHHHHHHhhc--------cCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHh
Confidence 566666667776666554432111 1111111 11234556666778899999999999999999999
Q ss_pred HHHHHHHHHHHHHhcch-h----HHHHHHHHHHHHHhhhhhhhhheecccccccchhhhHHHHHHhhhhhhHhHHHHHHH
Q 015075 292 MFVSACIFLLPLVFHQS-A----VVTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAV 366 (413)
Q Consensus 292 ~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~ 366 (413)
++++..++.+.+....+ . ...+...+...++..|..+....+++|.+|++.|+++.|+..++|.+|++++.....
T Consensus 384 GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~ 463 (538)
T KOG0252|consen 384 GFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFL 463 (538)
T ss_pred hHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhh
Confidence 98888887776665332 1 111222333345566788889999999999999999999999999999999998888
Q ss_pred HHhh-----ccchhHHHHHHHHHHHHHHHHhhcccccccCcchhhhhhhhc
Q 015075 367 GLVT-----SCHLRLAVILFEVVFVLAIASSLLFPFETMGRELKDTVDAIE 412 (413)
Q Consensus 367 ~l~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~et~~~~l~~~~~~~~ 412 (413)
++.+ ..+....+++++.+..+..+..+++ ||||+|++||+++|.|
T Consensus 464 ~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~-pEtk~~~leei~~e~~ 513 (538)
T KOG0252|consen 464 YLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLI-PETKGKSLEEISNEEE 513 (538)
T ss_pred HhhhccCCccccchHHHHHHHHHHHHhHheeEEe-ecccccCHHHhcChhh
Confidence 8877 5566678888888888776666655 6999999999987654
No 12
>PRK09952 shikimate transporter; Provisional
Probab=100.00 E-value=4.1e-33 Score=268.29 Aligned_cols=332 Identities=17% Similarity=0.232 Sum_probs=213.2
Q ss_pred cccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHH--------HHHHHHHHhhhcccch-hHHHHHHHhhccCCC
Q 015075 3 LGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYV--------SLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSH 73 (413)
Q Consensus 3 ~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~--------~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~ 73 (413)
+|++++|+++||+|||+++..+.++++++++++++++|+. .++++|+++|++.|+. +....++.|++|+++
T Consensus 79 ~g~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~ 158 (438)
T PRK09952 79 LGGVVFGHFGDRLGRKRMLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNK 158 (438)
T ss_pred hHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCC
Confidence 6788899999999999999999999999999999999987 5889999999999985 677789999999999
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHh--------cCCChHHHHHHhhHHHHHHHHHhhcCCCCchHHhhccChHHHHHH
Q 015075 74 RGRWMVALSAFWTAGTIFEASLAWVVM--------TRLNWRWLLAFSSVPSFALLLFYGLAPESPRYLCAKARTVDAHRI 145 (413)
Q Consensus 74 Rg~~~~~~~~~~~~G~~~~~~l~~~l~--------~~~~Wr~~f~~~~i~~~~~~~~~~~~pEsp~~l~~~~~~~~a~~~ 145 (413)
||+..+..+.++.+|.++++.+...+. +.+|||+.|++.+++.++....+...||||+|..++++.++.
T Consensus 159 rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~~~l~~~~~es~~~~~~~~~~~~~--- 235 (438)
T PRK09952 159 KAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIALWVRNGMEESAEFEQQQHEQAAA--- 235 (438)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHhhcccc---
Confidence 999999999999999998877666554 357999999999888766666667789999864322111000
Q ss_pred HHHHHHHcCCCCCCCccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhc-cchhhhHHHHHHHHHHHHHH
Q 015075 146 LEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLF-SRKLIRTTLLLWVLFFANVF 224 (413)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 224 (413)
+++. ...+.+. +++.. .......+...+
T Consensus 236 -------------------------~~~~-----------------------~~~~~l~~~~~~~---~~~~~~~~~~~~ 264 (438)
T PRK09952 236 -------------------------KKRI-----------------------PVIEALLRHPGAF---LKIIALRLCELL 264 (438)
T ss_pred -------------------------cccC-----------------------CHHHHHHHchHHH---HHHHHHHHHHHH
Confidence 0000 0000011 11111 111112222333
Q ss_pred HhhhHHhhh-hhccCCCCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHH
Q 015075 225 SYYGAVLLT-SKLSSGDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPL 303 (413)
Q Consensus 225 ~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~ 303 (413)
.+|....+. .++.. .++.+. ........+.+...+++.++.|+++||+|||+.+..+.+...+..+.+
T Consensus 265 ~~~~~~~~~~~y~~~--------~~g~s~---~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~ 333 (438)
T PRK09952 265 TMYIVTAFALNYSTQ--------NLGLPR---ELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPF 333 (438)
T ss_pred HHHHHHHHHHHHHHH--------hcCCCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHH
Confidence 333322222 11111 111111 111111223445556777889999999999988776655443332222
Q ss_pred Hh---cchhHHH-HHHHHHHHHHhhhhhhhhheecccccccchhhhHHHHHHhhhh-hhHhHHHHHHHHHhhccc--hhH
Q 015075 304 VF---HQSAVVT-TVLLFGVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGK-VGGMVCPLVAVGLVTSCH--LRL 376 (413)
Q Consensus 304 ~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~-~~~~~~p~~~~~l~~~~~--~~~ 376 (413)
.. ..+.... ....+...++.....+..+.+.+|.+|++.|+++.|+.+.+++ +++.++|.+.+.+.+..+ +..
T Consensus 334 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~ 413 (438)
T PRK09952 334 FMALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHS 413 (438)
T ss_pred HHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchH
Confidence 11 1122211 1122222223333345678889999999999999999988876 789999999998877542 334
Q ss_pred HHHHHHHHHHHHHHHhhccccccc
Q 015075 377 AVILFEVVFVLAIASSLLFPFETM 400 (413)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~et~ 400 (413)
++.+..++++++.+..+. .+||+
T Consensus 414 ~~~~~~~~~~i~~v~~~~-~~~~~ 436 (438)
T PRK09952 414 VAIYLLAGCLISAMTALL-MKDNQ 436 (438)
T ss_pred HHHHHHHHHHHHHHHHHH-ccccc
Confidence 445555555665555544 46654
No 13
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=100.00 E-value=5.9e-33 Score=270.63 Aligned_cols=378 Identities=21% Similarity=0.297 Sum_probs=240.9
Q ss_pred ccccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcc---cHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchH
Q 015075 2 LLGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSP---NYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRW 77 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~---~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~ 77 (413)
.++++++|+++||+|||+++..+.+++.++.+++.+++ +++.+++.|+++|++.|.. +....++.|++|+++|+++
T Consensus 85 ~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 164 (481)
T TIGR00879 85 FIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGAL 164 (481)
T ss_pred HHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhh
Confidence 36789999999999999999999999999999885543 4568999999999998875 6677899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH---HHHhcCCChHHHHHHhhHHHHHHHHHhhcCCCCchHHhhccChHHHHHHHHHHHHHcC
Q 015075 78 MVALSAFWTAGTIFEASLA---WVVMTRLNWRWLLAFSSVPSFALLLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQ 154 (413)
Q Consensus 78 ~~~~~~~~~~G~~~~~~l~---~~l~~~~~Wr~~f~~~~i~~~~~~~~~~~~pEsp~~l~~~~~~~~a~~~~~~~~~~~~ 154 (413)
+++++.+..+|..+++.++ ....+..+||+.|++.+++.++..+..+++||+|+++..+++.+++++..++....++
T Consensus 165 ~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (481)
T TIGR00879 165 TSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLLFLGLFFLPESPRWLVGKGRVEEARKSLARLRGTSG 244 (481)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHcCChHHHHHHHHHHhCCCC
Confidence 9999999999999999988 5555678999999997777776677778899999998777777665554443321111
Q ss_pred CCCCCCccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhccchhhhHHHHHHHHHHHHHHHhhhHHhhhh
Q 015075 155 TKLPPGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTS 234 (413)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (413)
++. +...+.+... ... . ...+..+..+.......++...+........++.....+.....+.+
T Consensus 245 ---~~~----~~~~~~~~~~----~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (481)
T TIGR00879 245 ---EDK----ELLDELELID----IKR--S---IEKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSP 308 (481)
T ss_pred ---CcH----HHHHHHHHHH----HHH--H---HHHhhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHH
Confidence 000 0000000000 000 0 00000001111111111110111111112222222111111111111
Q ss_pred hccCCCCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHH---h-cch--
Q 015075 235 KLSSGDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLV---F-HQS-- 308 (413)
Q Consensus 235 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~---~-~~~-- 308 (413)
.+.. ..+.+... .........+..+++.++.++++||+|||+....+++...+..+.+. . ..+
T Consensus 309 ~~~~--------~~g~~~~~---~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (481)
T TIGR00879 309 TIFE--------NAGVSTDH---AFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGS 377 (481)
T ss_pred HHHH--------HcCCCchH---HHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCc
Confidence 1110 11121211 12233445566778899999999999999987776555444333322 1 111
Q ss_pred ----hHHH-HHHHHHHHHHhhhhhhhhheecccccccchhhhHHHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHHHHH
Q 015075 309 ----AVVT-TVLLFGVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEV 383 (413)
Q Consensus 309 ----~~~~-~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~ 383 (413)
.... ....+....+..+..+..+.+..|.+|++.|+++.|+.+.+.+++++++|.+.+.+.+..+....++++++
T Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~ 457 (481)
T TIGR00879 378 SKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGG 457 (481)
T ss_pred ccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHH
Confidence 1111 11122222223334456778889999999999999999999999999999999988887666667778888
Q ss_pred HHHHHHHHhhcccccccCcchhh
Q 015075 384 VFVLAIASSLLFPFETMGRELKD 406 (413)
Q Consensus 384 ~~~~~~~~~~~~~~et~~~~l~~ 406 (413)
+++++.+..+++.||+++++++|
T Consensus 458 ~~~~~~i~~~~~~~~~~~~~~~~ 480 (481)
T TIGR00879 458 LNVLGLIFVYFFLPETKGRTLEE 480 (481)
T ss_pred HHHHHHHHHheecccCCCCChhh
Confidence 88888888888889999988764
No 14
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=100.00 E-value=3.5e-32 Score=261.75 Aligned_cols=330 Identities=20% Similarity=0.276 Sum_probs=204.8
Q ss_pred ccccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHH--------HHHHHHHHhhhcccch-hHHHHHHHhhccCC
Q 015075 2 LLGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYV--------SLVIFRCFVGVGLGGV-PVFLAYFLEFVPVS 72 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~--------~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~ 72 (413)
.+|++++|+++||+|||+++..+.++++++++++++++|+. .++++|+++|+++|+. +...++++|++|++
T Consensus 77 ~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~ 156 (432)
T PRK10406 77 PIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEG 156 (432)
T ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCC
Confidence 47899999999999999999999999999999999999875 5899999999999985 77789999999999
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHh--------cCCChHHHHHHhhHHHHHHHHHhhcCCCCchHHhhccChHHHHH
Q 015075 73 HRGRWMVALSAFWTAGTIFEASLAWVVM--------TRLNWRWLLAFSSVPSFALLLFYGLAPESPRYLCAKARTVDAHR 144 (413)
Q Consensus 73 ~Rg~~~~~~~~~~~~G~~~~~~l~~~l~--------~~~~Wr~~f~~~~i~~~~~~~~~~~~pEsp~~l~~~~~~~~a~~ 144 (413)
+||+..++.+.+...|.++++.+...+. +.+|||+.|++.+++.++..+.+..+||+|++..++.
T Consensus 157 ~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~~~~~~~e~~~~~~~~~------- 229 (432)
T PRK10406 157 RKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVALWLRRQLDETSQQETRAL------- 229 (432)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHhcCCCCchHHHhhh-------
Confidence 9999999998888888888876655442 2689999999999888777767777888876310000
Q ss_pred HHHHHHHHcCCCCCCCccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhccchhhhHHHHHHHHHHHHHH
Q 015075 145 ILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVF 224 (413)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (413)
+ +. ..++.+++.+ +.........+....
T Consensus 230 ----------~----------------~~------------------------~~~~~l~~~~--~~~~~~~~~~~~~~~ 257 (432)
T PRK10406 230 ----------K----------------EA------------------------GSLKGLWRNR--RAFIMVLGFTAAGSL 257 (432)
T ss_pred ----------c----------------cc------------------------ccHHHHHhhH--HHHHHHHHHHHHHHH
Confidence 0 00 0011111111 111111112222233
Q ss_pred HhhhHHhhh-hhccCCCCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHH
Q 015075 225 SYYGAVLLT-SKLSSGDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPL 303 (413)
Q Consensus 225 ~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~ 303 (413)
.+|....+. +.+.. .++.+..+ ......+..+...++..+.|+++||+|||+.+....++..+...++
T Consensus 258 ~~~~~~~~lp~~l~~--------~~g~s~~~---~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~ 326 (432)
T PRK10406 258 CFYTFTTYMQKYLVN--------TAGMHANV---ASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPI 326 (432)
T ss_pred HHHHHHHHHHHHHHH--------hcCCCHHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHH
Confidence 344333322 22211 11111111 1111223334445667788999999999987766544332222221
Q ss_pred H--h--cchhHHHHHHHHHHHHHhhhhhhhhheecccccccchhhhHHHHHHhhhhh-hHhHHHHHHHHHhhccchhH-H
Q 015075 304 V--F--HQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKV-GGMVCPLVAVGLVTSCHLRL-A 377 (413)
Q Consensus 304 ~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~-~~~~~p~~~~~l~~~~~~~~-~ 377 (413)
. . ..+......+.....++.....+..+.+.+|.+|++.|+++.|++++++++ .+...|.+.+ +++..+.+. .
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~-~l~~~g~~~~~ 405 (432)
T PRK10406 327 LSALQNVSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVAL-SLKSIGMETAF 405 (432)
T ss_pred HHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHH-HHHHhCCCcHH
Confidence 1 1 112221111121111122122345677889999999999999999999886 3445787766 445555333 3
Q ss_pred HHHHHHHHHHHHHHhhcccccccCcch
Q 015075 378 VILFEVVFVLAIASSLLFPFETMGREL 404 (413)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~et~~~~l 404 (413)
+++..+.++++.+..+++ |+++|+.
T Consensus 406 ~~~~~~~~~i~~~~~~~l--~~~~~~~ 430 (432)
T PRK10406 406 FWYVTLMAVVAFLVSLML--HRKGKGM 430 (432)
T ss_pred HHHHHHHHHHHHHHHHHh--hhccccc
Confidence 344445555555555543 5556654
No 15
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=100.00 E-value=4.2e-31 Score=247.52 Aligned_cols=320 Identities=16% Similarity=0.102 Sum_probs=205.5
Q ss_pred ccccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccchhHHHHHHHhhccCCCcchHHHHH
Q 015075 2 LLGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGVPVFLAYFLEFVPVSHRGRWMVAL 81 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~~~~~~~~~E~~p~~~Rg~~~~~~ 81 (413)
.+++++.|+++||+|||+++..+......+.+....++|++.+++.|+++|+++|..+.....++|++|+++|++++++.
T Consensus 40 ~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~~~~~~~~~~~~~~~~~~~r~~a~~~~ 119 (368)
T TIGR00903 40 LALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLLACQLLAALGQPFLLNAFAPAASQIREERRDLVISLL 119 (368)
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhHhHHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence 46788999999999999987766555545443334447999999999999999986555666679999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHH-HHHhhcCCCCchHHhhccChHHHHHHHHHHHHHcCCCCCCC
Q 015075 82 SAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFAL-LLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPG 160 (413)
Q Consensus 82 ~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~-~~~~~~~pEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~ 160 (413)
+.+..+|.+++++++..+.+.+|||+.|++.++++++. .+.++++||+|++.. +..
T Consensus 120 ~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~lp~~p~~~~---~~~-------------------- 176 (368)
T TIGR00903 120 SFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVLAALPALPFQAA---EGF-------------------- 176 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHcCCCCCCCC---CCc--------------------
Confidence 99999999999999999988999999999977776554 556677899986410 000
Q ss_pred ccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhccchhhhHHHHHHHHHHHHHHHhhhHHhhhhhccCCC
Q 015075 161 ILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGD 240 (413)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 240 (413)
+ . + +. .+.++++++++. ....+..+++....+|+...+.+.+...
T Consensus 177 ----~-~-~--~~-----------------------~~~~~~ll~~~~---~~~~~~~~~~~~~~~~~~~~wlp~~L~~- 221 (368)
T TIGR00903 177 ----G-F-K--DA-----------------------VKEFGALAGRKD---LWIIGAILGFGVALFDNLAIWLEAALRP- 221 (368)
T ss_pred ----c-h-H--HH-----------------------HHHHHHHHcChh---HHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 0 0 0 00 001122222222 2233344455555555554444333211
Q ss_pred CccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhChh---HHHHH-HHHHHHHHHHHHHhcchhHHHHHHH
Q 015075 241 NKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRK---LSMVL-MFVSACIFLLPLVFHQSAVVTTVLL 316 (413)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (413)
.+.+. . . .....+..+.|.+..++++||..|| ..... ..+...+.+..+....+......+.
T Consensus 222 -------~g~s~-~-~-----~~~~~l~~~~g~~g~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~ 287 (368)
T TIGR00903 222 -------AGLED-I-A-----GDAVALAILAGLIGVAVIPDRVARAGLRSIYIRAAALLIAAFFLALAFELNRLALFAFI 287 (368)
T ss_pred -------CCCCh-H-H-----HHHHHHHHHHHHHHHHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHccccHHHHHHH
Confidence 11111 1 1 1122233334555568889987653 32222 2222222222222222222223333
Q ss_pred HHHHHHhhhhhhhhheecccccccchhhhHHHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHhhcc
Q 015075 317 FGVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLF 395 (413)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (413)
....++.....+..+.+.+|.+|++.|+++.|+.++.++++++++|.+.+.+.. +....+.+++++.+++.+...++
T Consensus 288 ~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~--~~~~~f~~~~~~~~i~~~~~~~~ 364 (368)
T TIGR00903 288 GIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS--SAEAYFTFLAILITIAFAIALLL 364 (368)
T ss_pred HHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHhC
Confidence 333344445556678899999999999999999999999999999998887663 45566777777777777666533
No 16
>PRK15075 citrate-proton symporter; Provisional
Probab=99.98 E-value=1.3e-29 Score=244.11 Aligned_cols=340 Identities=19% Similarity=0.248 Sum_probs=204.6
Q ss_pred cccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHH--------HHHHHHHHhhhcccch-hHHHHHHHhhccCCC
Q 015075 3 LGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYV--------SLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSH 73 (413)
Q Consensus 3 ~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~--------~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~ 73 (413)
+|+++.|+++||+|||++++.+.+++++++++++++++++ .++++|+++|++.|.. +....++.|++|+++
T Consensus 71 ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~ 150 (434)
T PRK15075 71 LGAIVLGAYIDRVGRRKGLIVTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGR 150 (434)
T ss_pred hHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCccc
Confidence 5788999999999999999999999999999999999987 4689999999999875 666789999999999
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHh--------cCCChHHHHHHhhHHHHHHHHHhhcCCCCchHHhhccChHHHHHH
Q 015075 74 RGRWMVALSAFWTAGTIFEASLAWVVM--------TRLNWRWLLAFSSVPSFALLLFYGLAPESPRYLCAKARTVDAHRI 145 (413)
Q Consensus 74 Rg~~~~~~~~~~~~G~~~~~~l~~~l~--------~~~~Wr~~f~~~~i~~~~~~~~~~~~pEsp~~l~~~~~~~~a~~~ 145 (413)
||+.+++.....++|..+++.++..+. +.+|||+.|++..+...+..+.....||++++..++++
T Consensus 151 rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~------- 223 (434)
T PRK15075 151 KGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCLIVPFIFLIRRSLEETEEFLARKHR------- 223 (434)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhhhc-------
Confidence 999999999888888888877777652 46899999998655443333334445554332100000
Q ss_pred HHHHHHHcCCCCCCCccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhccchhhhHHHHHHHHHHHHHHH
Q 015075 146 LEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFS 225 (413)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (413)
+ +. + ..++... +..+.........+.....
T Consensus 224 ----------~---------------~~--------------------~---~~~~~~~--~~~~~~~~~~~~~~~~~~~ 253 (434)
T PRK15075 224 ----------P---------------SM--------------------R---EIFRSLA--ANWRIVLAGMLMVAMTTVS 253 (434)
T ss_pred ----------c---------------cc--------------------c---cHHHHHH--HhHHHHHHHHHHHHHHHHH
Confidence 0 00 0 0000000 0001111111112222223
Q ss_pred hhhHHhhhhhccCCCCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHH-HH-
Q 015075 226 YYGAVLLTSKLSSGDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLL-PL- 303 (413)
Q Consensus 226 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~-~~- 303 (413)
++....+.+.+.. +.++.+..+ .........+..+++.++.|+++||+|||+....+......... .+
T Consensus 254 ~~~~~~~~p~~l~-------~~~g~~~~~---~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~ 323 (434)
T PRK15075 254 FYLITVYTPTFGK-------TVLHLSAAD---SLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALS 323 (434)
T ss_pred HHHHHHHHHHHHH-------HhcCCCHHH---HHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence 3333322222110 011221111 11223345566678889999999999999887665433322111 11
Q ss_pred Hh-cchhH-HHHHHHHHHHHHhhhhhhhhheecccccccchhhhHHHHHHhhhhh-hHhHHHHHHHHHhhccchhHHHHH
Q 015075 304 VF-HQSAV-VTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKV-GGMVCPLVAVGLVTSCHLRLAVIL 380 (413)
Q Consensus 304 ~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~-~~~~~p~~~~~l~~~~~~~~~~~~ 380 (413)
.. ..+.. ..........++.....+..+.+.+|.+|++.|+++.|+.+++++. ++.++|.+.+.+.+..+......+
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~~~~~~~ 403 (434)
T PRK15075 324 WLVAAPSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGDKAAPGY 403 (434)
T ss_pred HHHcCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCCchHHHH
Confidence 11 11111 1111111122222233344567789999999999999999888876 488899999988887664222122
Q ss_pred HHHHHHHHHHHhhcccccccCcchhhhhh
Q 015075 381 FEVVFVLAIASSLLFPFETMGRELKDTVD 409 (413)
Q Consensus 381 ~~~~~~~~~~~~~~~~~et~~~~l~~~~~ 409 (413)
+.+.+.++.++..+...+..+.+++..++
T Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (434)
T PRK15075 404 WLSFAAVCGLIATLVLYRRRGARLQAAEA 432 (434)
T ss_pred HHHHHHHHHHHHHHHhccccchhhhhhhc
Confidence 22222233333444556777777776554
No 17
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.98 E-value=7.7e-30 Score=245.42 Aligned_cols=343 Identities=20% Similarity=0.258 Sum_probs=216.5
Q ss_pred ccccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHHHH
Q 015075 2 LLGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVA 80 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~ 80 (413)
.+|+++.|+++||+|||+++..+.++++++.++++++++++.++++|+++|++.|.. +....++.|++|+++|++..++
T Consensus 67 ~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~ 146 (426)
T PRK12307 67 PFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAF 146 (426)
T ss_pred HHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhH
Confidence 467889999999999999999999999999999999999999999999999998875 6677889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHHHHHhhcCCCCchHHhhccChHHHHHHHHHHHHHcCCCCCCC
Q 015075 81 LSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFALLLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPG 160 (413)
Q Consensus 81 ~~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~~~~~~~~pEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~ 160 (413)
...+..+|.++++.+...+.+..+||+.|++..++.++..+.....||++++..++.+. ++
T Consensus 147 ~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~---------------~~---- 207 (426)
T PRK12307 147 LVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLLPVLLVIYIRARAPESKEWEEAKLSG---------------KG---- 207 (426)
T ss_pred HHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHHHHHHHHHHHHHCCCChHHHHhhhhc---------------cc----
Confidence 99999999999998888888889999999987665555444445567776542211000 00
Q ss_pred ccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhccchhhhHHHHHHHHHHHHHHHhhhHH-hhhhhccCC
Q 015075 161 ILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAV-LLTSKLSSG 239 (413)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~ 239 (413)
+ + + +.. . +.....++..++++..+.........+.....++... +.+..+..
T Consensus 208 ----~-~-~--~~~--~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 260 (426)
T PRK12307 208 ----K-H-S--QSA--W----------------SVFSLSMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAG- 260 (426)
T ss_pred ----c-c-c--ccc--h----------------hhhhHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 0 0 0 000 0 0000112223332222222222222111111111111 11111110
Q ss_pred CCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHh-cchhHH-HHHHHH
Q 015075 240 DNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVF-HQSAVV-TTVLLF 317 (413)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~ 317 (413)
.+.+. ........+..++.+++.++.+++.||+|||+....+.+.+.+....+.. ..+... .....+
T Consensus 261 --------~g~~~---~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (426)
T PRK12307 261 --------EGFDT---GVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLF 329 (426)
T ss_pred --------cCCCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHH
Confidence 11111 11112233455667888999999999999999887776665544333322 222211 112222
Q ss_pred HHHHHhhhhhhhhheecccccccchhhhHHHHHHhhhhhhHhHHHHHHHHHhhccchhHH-HHHHHHHHHHHHHHhhccc
Q 015075 318 GVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLA-VILFEVVFVLAIASSLLFP 396 (413)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 396 (413)
+......+..+..+.+..|.+|++.|+++.|+.+.++++++.++|.+.+.+.+..+.... ++.....+.++.+...+..
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 409 (426)
T PRK12307 330 GLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMGLGAALTFIVAFWTATILLIIGLSI 409 (426)
T ss_pred HHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHhhccccC
Confidence 222222333445667789999999999999999999999999999999988887764432 2333333334444444445
Q ss_pred ccccC
Q 015075 397 FETMG 401 (413)
Q Consensus 397 ~et~~ 401 (413)
||+.+
T Consensus 410 ~~~~~ 414 (426)
T PRK12307 410 PDRLK 414 (426)
T ss_pred Chhhh
Confidence 66644
No 18
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.97 E-value=4.6e-29 Score=238.49 Aligned_cols=329 Identities=23% Similarity=0.325 Sum_probs=215.0
Q ss_pred ccccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHHHH
Q 015075 2 LLGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVA 80 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~ 80 (413)
.+|+++.|+++||+|||+++..+.++..++.+++++++|++.+++.|+++|++.+.. +...+++.|++|+++|++.+++
T Consensus 64 ~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 143 (406)
T PRK11551 64 LPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSL 143 (406)
T ss_pred HHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHH
Confidence 467889999999999999999999999999999999999999999999999998865 6677899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHH-HHHhhcCCCCchHHhhccChHHHHHHHHHHHHHcCCCCCC
Q 015075 81 LSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFAL-LLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPP 159 (413)
Q Consensus 81 ~~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~-~~~~~~~pEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~ 159 (413)
.+.+..+|..+++.++..+.+..+||+.|++.++..++. .....++||+|++..++++.++.+
T Consensus 144 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~---------------- 207 (406)
T PRK11551 144 MYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAGKQRA---------------- 207 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCcchhhh----------------
Confidence 999999999999999888888889999999877665544 445566899886532211100000
Q ss_pred CccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhccchhhhHHHHHHHHHHHHHHHhhhHHhhhhhccCC
Q 015075 160 GILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSG 239 (413)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 239 (413)
+. . +..++++..+.....+..++.....++....+.+.+...
T Consensus 208 ---------~~--~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 249 (406)
T PRK11551 208 ---------PV--L---------------------------RALFGEGRATATLLLWISYFFTLIVLYFLLNWLPSLLVG 249 (406)
T ss_pred ---------hh--H---------------------------HHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 00 0 000000000111112222222222222222222211110
Q ss_pred CCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHH
Q 015075 240 DNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGV 319 (413)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (413)
.+.+....+ .......++.+++.++.|++.||+|||+.+..+.+.....+..+....+........+..
T Consensus 250 --------~g~s~~~~~---~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (406)
T PRK11551 250 --------QGLSRSQAG---LVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFAA 318 (406)
T ss_pred --------CCCChhhhh---HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHH
Confidence 122222222 223345567788999999999999999887765554444333333333332222223333
Q ss_pred HHHhhhhhhhhheecccccccchhhhHHHHHHhhhhhhHhHHHHHHHHHhhccchhHH-HHHHHHHHHHHHHHhhcc
Q 015075 320 RMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLA-VILFEVVFVLAIASSLLF 395 (413)
Q Consensus 320 ~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 395 (413)
.++..+..+..+.+.+|.+|++.|+++.|+.+.++++++.++|.+.+.+.+..+.... ++....+.+++.+..++.
T Consensus 319 g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (406)
T PRK11551 319 GLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALLL 395 (406)
T ss_pred HHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 3444455567788899999999999999999999999999999999988876443333 333333444444444433
No 19
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.97 E-value=1.3e-29 Score=242.16 Aligned_cols=336 Identities=16% Similarity=0.219 Sum_probs=205.5
Q ss_pred ccccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHHHH
Q 015075 2 LLGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVA 80 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~ 80 (413)
.+++++.|+++||+|||+++..+.++++++.+++++++|++.+++.|+++|++.|.. +....++.|++|+++||+.+++
T Consensus 57 ~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~ 136 (412)
T TIGR02332 57 VICGIPSNIMLAIIGARRWIAGIMVLWGIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANAL 136 (412)
T ss_pred HHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHH
Confidence 367889999999999999999999999999999999999999999999999999875 6667889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhc------CCChHHHHHHhhHHHHHH-HHHhhcCCCCch---HHhhccChHHHHHHHHHHH
Q 015075 81 LSAFWTAGTIFEASLAWVVMT------RLNWRWLLAFSSVPSFAL-LLFYGLAPESPR---YLCAKARTVDAHRILEKMA 150 (413)
Q Consensus 81 ~~~~~~~G~~~~~~l~~~l~~------~~~Wr~~f~~~~i~~~~~-~~~~~~~pEsp~---~l~~~~~~~~a~~~~~~~~ 150 (413)
++.+..+|.++++++++.+.+ ..|||+.|++.+++.++. .+.++++||+|+ |+.++ +.+...++.+
T Consensus 137 ~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~~----~~~~~~~~~~ 212 (412)
T TIGR02332 137 FMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKAKWLDEE----DKKALKEMID 212 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcccCCCCCHH----HHHHHHHHHH
Confidence 999999999999999887753 369999999988887654 455677899985 22211 1111111111
Q ss_pred HHcCCCCCCCccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhccchhhhHHHHHHHHHHHHHHHhhhHH
Q 015075 151 FVNQTKLPPGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAV 230 (413)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (413)
. ++.+.+ + . +.+. +++ . ......++.+++++.+ .....+++....++...
T Consensus 213 ~-~~~~~~------~-~-~~~~-----~~~-----------~-~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 262 (412)
T TIGR02332 213 N-DQLTLE------Q-P-EGAF-----AHA-----------A-MPQRSMLREIFTPAIM----LYTLAYFCLTNTLSAIN 262 (412)
T ss_pred h-cccccc------c-c-cccc-----ccc-----------c-ccHHHHHHHhcChHHH----HHHHHHHHHHHHHHHHH
Confidence 0 000000 0 0 0000 000 0 0000112223332221 22222333333333333
Q ss_pred hhhhhccCCCCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhChhHH-HHHHHHHHHHHHHHHHhcchh
Q 015075 231 LLTSKLSSGDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLS-MVLMFVSACIFLLPLVFHQSA 309 (413)
Q Consensus 231 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~-~~~~~~~~~~~~~~~~~~~~~ 309 (413)
.+.+.+.... ..+.+... .........++..+|.++.|+++||++||+. .....+...+.+.......+.
T Consensus 263 ~~~p~~l~~~------~~~~s~~~---~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 333 (412)
T TIGR02332 263 IWTPQILQSF------NQGSSNIM---IGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWLLASATDHN 333 (412)
T ss_pred HHHHHHHHhc------CCCCcHHH---hHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHHHHHhcCCH
Confidence 2222221110 00111111 1122345566678899999999999997764 333332222222211122222
Q ss_pred HHHHHHHHHHHHHhhhhhhhhheecccccccchhhhHHHHHHhhhhhhHhHHHHHHHHHhhccc-hhHHHHH
Q 015075 310 VVTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCH-LRLAVIL 380 (413)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~-~~~~~~~ 380 (413)
...........++.....+..+....|.+|++.|+++.|+.+..+++|++++|.+.+.+.+..+ +...+.+
T Consensus 334 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~ 405 (412)
T TIGR02332 334 LIQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATGSFNSGLWF 405 (412)
T ss_pred HHHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCCCCchhHHH
Confidence 2111111111112222234456677889999999999999999999999999999988888765 3344443
No 20
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.97 E-value=8.7e-29 Score=236.31 Aligned_cols=327 Identities=22% Similarity=0.317 Sum_probs=208.9
Q ss_pred ccccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHHHH
Q 015075 2 LLGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVA 80 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~ 80 (413)
.+++++.|+++||+|||+++..+.++++++.++++++++++.+++.|+++|++.+.. +...+++.|++|+++|++..++
T Consensus 61 ~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 140 (405)
T TIGR00891 61 WFGALMFGLWGDRYGRRLPMVTSIVLFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGL 140 (405)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHH
Confidence 367889999999999999999999999999999999999999999999999998875 6677899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCC--hHHHHHHhhHHHHHHHHHhhcCCCCchHHhhccChHHHHHHHHHHHHHcCCCCC
Q 015075 81 LSAFWTAGTIFEASLAWVVMTRLN--WRWLLAFSSVPSFALLLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLP 158 (413)
Q Consensus 81 ~~~~~~~G~~~~~~l~~~l~~~~~--Wr~~f~~~~i~~~~~~~~~~~~pEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~ 158 (413)
.+.+..+|.++++.++..+.+..+ ||+.|++.+++.++..+.....||+|++..++++.++..+..++.. +.+
T Consensus 141 ~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-- 215 (405)
T TIGR00891 141 LISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFALWLRKNIPEAEDWKEKHAGKALVRTMVDILY---GGE-- 215 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHhhhhhhhhhHHHHHh---ccc--
Confidence 999999999999999888877665 9999998877776666667778998876433222111111111100 000
Q ss_pred CCccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhccchhhhHHHHHHHHHHHHHHHhhhH-Hhhhhhcc
Q 015075 159 PGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGA-VLLTSKLS 237 (413)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~ 237 (413)
+...++. ++.....+... ++...................... .+++..+.
T Consensus 216 --------~~~~~~~--------------------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (405)
T TIGR00891 216 --------HRIANIV--------------------MTLAAAMVQSA-GKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLK 266 (405)
T ss_pred --------hhhhhhh--------------------hhhhHHhhhhh-hhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHH
Confidence 0000000 00000000000 011111111111111111111111 11111111
Q ss_pred CCCCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHH-HhcchhHHHHHHH
Q 015075 238 SGDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPL-VFHQSAVVTTVLL 316 (413)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 316 (413)
+.++.+... .........++.+++.++.+++.||+|||+.+..+.+.+....... ....+........
T Consensus 267 --------~~~g~s~~~---~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (405)
T TIGR00891 267 --------ADLGLSPHT---VANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAVLGLGL 335 (405)
T ss_pred --------HHhCCCHHH---HHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHHHHHHH
Confidence 011111111 1122334556778899999999999999998777665543322222 2222322222222
Q ss_pred HHHHHHhhhhhhhhheecccccccchhhhHHHHHHhhhhhhHhHHHHHHHHHhhccc
Q 015075 317 FGVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCH 373 (413)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~ 373 (413)
+...++..+..+..+.+.+|.+|++.|+++.|+.+.++++++.++|.+.+.+.+..+
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g 392 (405)
T TIGR00891 336 FFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLD 392 (405)
T ss_pred HHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 333344444556677788999999999999999999999999999999999988766
No 21
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.97 E-value=4.3e-30 Score=231.24 Aligned_cols=342 Identities=20% Similarity=0.281 Sum_probs=244.0
Q ss_pred cccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccc-hhHHHHHHHhhccCCCcchHHHHH
Q 015075 3 LGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGG-VPVFLAYFLEFVPVSHRGRWMVAL 81 (413)
Q Consensus 3 ~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~-~~~~~~~~~E~~p~~~Rg~~~~~~ 81 (413)
++.+++|.++||.++|..+..++++.++..++.+++++...+.++.+++|...|. .|.....+..|+|++|||+..+++
T Consensus 79 ~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siW 158 (448)
T COG2271 79 VSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIW 158 (448)
T ss_pred HHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEe
Confidence 5788999999999999999999999999999999999999999999999998875 588889999999999999999999
Q ss_pred HHHHHHHHHHHHHHH--HHHhcCCChHHHHHHhhHHHHHH-HHHhhcCCCCchHHhhccChHHHHHHHHHHHHHcCCCCC
Q 015075 82 SAFWTAGTIFEASLA--WVVMTRLNWRWLLAFSSVPSFAL-LLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLP 158 (413)
Q Consensus 82 ~~~~~~G~~~~~~l~--~~l~~~~~Wr~~f~~~~i~~~~~-~~~~~~~pEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~ 158 (413)
+.+.++|..+.+++. +.+..+.+||..|++.++.++++ ++.++.++|+|+- .|-.
T Consensus 159 n~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs---~GLP------------------- 216 (448)
T COG2271 159 NTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQS---EGLP------------------- 216 (448)
T ss_pred hhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCccc---cCCC-------------------
Confidence 999999999999888 77777889999999999988765 6667778999972 1110
Q ss_pred CCccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhccchhhhHHHHHHHHHHHHHHHhh---hHHhhhhh
Q 015075 159 PGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYY---GAVLLTSK 235 (413)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 235 (413)
+.++..++..+.. +++ +.+++...++.+ .++..+.-.+|.+.+.+.+.|. ++.-|.+
T Consensus 217 ----~ie~~~~d~~e~~--~~~-----------~~~~~ls~~~i~--~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p- 276 (448)
T COG2271 217 ----PIEEYRGDPLEIY--EEE-----------KENEGLTAWQIF--VKYVLKNKLIWLLALANVFVYVVRYGINDWGP- 276 (448)
T ss_pred ----CHHHhhcCchhhh--hhh-----------ccCCCccHHHHH--HHHHHcChHHHHHHHHHHHHHHHHHHHhhhHH-
Confidence 0000000000000 000 000001111111 1222333346777777777763 3333332
Q ss_pred ccCCCCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHh--ChhHHHHH-HHHHHHHHHHHHHhcch--hH
Q 015075 236 LSSGDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKI--GRKLSMVL-MFVSACIFLLPLVFHQS--AV 310 (413)
Q Consensus 236 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~--grr~~~~~-~~~~~~~~~~~~~~~~~--~~ 310 (413)
.+..+..|++..+.+. .....=.++++|++++|+++||+ |||..+.+ ++++..+++..+....+ ..
T Consensus 277 ------~YL~e~k~~s~~~a~~---a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w~~~~~~~~ 347 (448)
T COG2271 277 ------LYLSEVKGFSLVKANW---AISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVLYWLAPNGSYL 347 (448)
T ss_pred ------HHHHHhcCCCHHHHHH---HHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHcCCCccHH
Confidence 2223444554444332 23445567899999999999996 77766554 34444444444444333 35
Q ss_pred HHHHHHHHHHHHhhhhhhhhheecccccccchhhhHHHHHHhhhhh-hHhHHHHHHHHHhhccchhHHHHHHHHHHHHHH
Q 015075 311 VTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKV-GGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAI 389 (413)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~-~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~ 389 (413)
+...+++.+++++.|...+......|..|.+..|++.|+...++++ |+..+....+++.|..+....++.+.+.++++.
T Consensus 348 l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~ 427 (448)
T COG2271 348 LDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAI 427 (448)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHH
Confidence 5566777888888998888888899999999999999999999999 888888877877787777777887777777665
Q ss_pred HHhhcc
Q 015075 390 ASSLLF 395 (413)
Q Consensus 390 ~~~~~~ 395 (413)
+.....
T Consensus 428 lll~~~ 433 (448)
T COG2271 428 LLLLPV 433 (448)
T ss_pred HHHHHH
Confidence 555443
No 22
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.97 E-value=3.9e-28 Score=233.67 Aligned_cols=351 Identities=14% Similarity=0.145 Sum_probs=216.3
Q ss_pred ccccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHHHH
Q 015075 2 LLGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVA 80 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~ 80 (413)
.+++++.|+++||+|||+++.++.++++++.++.++++|++.+++.|++.|++.|.. +...+++.|++|+++||+.+++
T Consensus 72 ~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~ 151 (434)
T PRK11663 72 GVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAI 151 (434)
T ss_pred HHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHH
Confidence 367889999999999999999999999999999999999999999999999988764 6677889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHH-HHHhhcCCCCchHHhhccChHHHHHHHHHHHHHcCCCCCC
Q 015075 81 LSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFAL-LLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPP 159 (413)
Q Consensus 81 ~~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~-~~~~~~~pEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~ 159 (413)
.+.+..+|..+++.+++.+.+.+|||+.|++.+++.++. ....+++||+|++.......++.
T Consensus 152 ~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~----------------- 214 (434)
T PRK11663 152 WNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWR----------------- 214 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCccccc-----------------
Confidence 999999999999999999888899999999888776544 44556678888642111000000
Q ss_pred Cccccchhhhhhhhccccccccccchhhhcchhhccccch-hh-hhccchhhhHHHHHHHHHHHHHHHhhhHHhh-hhhc
Q 015075 160 GILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSS-FF-MLFSRKLIRTTLLLWVLFFANVFSYYGAVLL-TSKL 236 (413)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l 236 (413)
++..+.+++. +.+ +.+... ++ ..++.+. ........+.....++....+ +.++
T Consensus 215 -----~~~~~~~~~~----~~~------------~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~p~~l 270 (434)
T PRK11663 215 -----HDALELAQQQ----EGA------------GLSRKEILTKYVLLNPY---IWLLSFSYVLVYVVRAAINDWGNLYM 270 (434)
T ss_pred -----ccccccchhc----ccc------------CCChhhhHHHHHhcChH---HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000000000 000 000000 00 0111111 111111112222222222222 2222
Q ss_pred cCCCCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHh--Chh-HHHHHHHHHHH--HHHHHHHhcchhHH
Q 015075 237 SSGDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKI--GRK-LSMVLMFVSAC--IFLLPLVFHQSAVV 311 (413)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~--grr-~~~~~~~~~~~--~~~~~~~~~~~~~~ 311 (413)
. +.++.+....+ .......++..+|.++.|+++||+ ++| .......+... ...+......+...
T Consensus 271 ~--------~~~g~s~~~a~---~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (434)
T PRK11663 271 S--------ETLGVDLVTAN---SAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMPFASYVM 339 (434)
T ss_pred H--------hccCCCHHHHH---HHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHcccccHHH
Confidence 1 11122222111 123344566788999999999998 333 32222111111 11111111112222
Q ss_pred HHHHHHHHHHHhhhhhhhhheecccccccchhhhHHHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHH
Q 015075 312 TTVLLFGVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIAS 391 (413)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 391 (413)
.....+...++..+.......+..|.+|++.|+++.|+.++.+++|+.++|.+.+.+.+..+....+...+++++++.+.
T Consensus 340 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~ 419 (434)
T PRK11663 340 QAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISALL 419 (434)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 22222222232223333334567899999999999999999999999999999999999888777777777777777666
Q ss_pred hhcccccccCcch
Q 015075 392 SLLFPFETMGREL 404 (413)
Q Consensus 392 ~~~~~~et~~~~l 404 (413)
.++..+++++++-
T Consensus 420 ~~~~~~~~~~~~~ 432 (434)
T PRK11663 420 LLPFLNAQAPREA 432 (434)
T ss_pred HHHHHhhhchhcc
Confidence 6666666655543
No 23
>PRK03545 putative arabinose transporter; Provisional
Probab=99.96 E-value=2.2e-27 Score=225.58 Aligned_cols=319 Identities=16% Similarity=0.153 Sum_probs=207.6
Q ss_pred cccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHHHHH
Q 015075 3 LGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVAL 81 (413)
Q Consensus 3 ~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~ 81 (413)
++++++|+++||+|||+++..+.+++.++++++++++|++.+++.|+++|++.+.. +...+++.|++|+++|++++++.
T Consensus 59 ~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~ 138 (390)
T PRK03545 59 LMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLL 138 (390)
T ss_pred HHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHH
Confidence 56788999999999999999999999999999999999999999999999988765 66778899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHHH-HHhhcCCCCchHHhhccChHHHHHHHHHHHHHcCCCCCCC
Q 015075 82 SAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFALL-LFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPG 160 (413)
Q Consensus 82 ~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~~-~~~~~~pEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~ 160 (413)
+.+..+|..+++++++.+.+..|||+.|++.++..++.. .....+||.|+ +++ ++
T Consensus 139 ~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~----~~~-~~------------------- 194 (390)
T PRK03545 139 ATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLLPS----EHS-GS------------------- 194 (390)
T ss_pred HHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCCCC----CCc-ch-------------------
Confidence 999999999999999998888999999999888776553 33445666442 000 00
Q ss_pred ccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhccchhhhHHHHHHHHHHHHHHHhhhH-HhhhhhccCC
Q 015075 161 ILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGA-VLLTSKLSSG 239 (413)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~ 239 (413)
.+ ..+..++++..+..... .+.....++.. .+..+.+..
T Consensus 195 ---------~~---------------------------~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~- 234 (390)
T PRK03545 195 ---------LK---------------------------SLPLLFRRPALVSLYLL---TVVVVTAHFTAYSYIEPFVQQ- 234 (390)
T ss_pred ---------HH---------------------------HHHHHHhCcHHHHHHHH---HHHHHHHHHHHHHHHHHHHHH-
Confidence 00 00001111111111111 11111111111 111111110
Q ss_pred CCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHH
Q 015075 240 DNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGV 319 (413)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (413)
..+.+....+ .......+.++++.++.+++.||.+||.......+.............+...........
T Consensus 235 -------~~g~s~~~~~---~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~ 304 (390)
T PRK03545 235 -------VAGLSENFAT---LLLLLFGGAGIIGSVLFSRLGNRHPSGFLLIAIALLLVCLLLLLPAANSEWHLSVLSIFW 304 (390)
T ss_pred -------hcCCCccHHH---HHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHH
Confidence 1112222111 223345567788999999999999988754433333222222222222322222222222
Q ss_pred HHHhhhhhhhhheecccccccchhhhHHHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHhhccc
Q 015075 320 RMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFP 396 (413)
Q Consensus 320 ~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (413)
.+...+..+.......|..| +.|+.+.|+.+...++|..++|.+.+.+.+..+....+.....+.+++.+...+..
T Consensus 305 g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
T PRK03545 305 GIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIF 380 (390)
T ss_pred HHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHc
Confidence 23332223334455667766 57899999999999999999999999999888877777777777777666665554
No 24
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.96 E-value=3e-28 Score=236.70 Aligned_cols=348 Identities=14% Similarity=0.128 Sum_probs=207.7
Q ss_pred cccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhh-----cccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcch
Q 015075 3 LGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSF-----SPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGR 76 (413)
Q Consensus 3 ~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~-----a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~ 76 (413)
+++++.|+++||+|||+++..+.++++++.++.++ ++|++.+++.|+++|++.|.. +...+++.||+|+++||+
T Consensus 79 ~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~ 158 (467)
T PRK09556 79 VGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGR 158 (467)
T ss_pred HHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceee
Confidence 67889999999999999999888888877776655 689999999999999988764 777789999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCC---ChHHHHHHhhHHHHHH-HHHhhcCCCCchHHhhccChHHHHHHHHHHHHH
Q 015075 77 WMVALSAFWTAGTIFEASLAWVVMTRL---NWRWLLAFSSVPSFAL-LLFYGLAPESPRYLCAKARTVDAHRILEKMAFV 152 (413)
Q Consensus 77 ~~~~~~~~~~~G~~~~~~l~~~l~~~~---~Wr~~f~~~~i~~~~~-~~~~~~~pEsp~~l~~~~~~~~a~~~~~~~~~~ 152 (413)
++++++.+..+|.++++++...+.+.. +||..|.+.+++.++. ++.+++.+|+|+.. +..++ ++. .
T Consensus 159 a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~---~~~~~-~~~------~ 228 (467)
T PRK09556 159 FLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPEEL---GWGKA-EEI------F 228 (467)
T ss_pred eEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHHHHhCCCChhhc---CCCCh-hhc------c
Confidence 999999999999999988876655432 6999998888777655 33445567766521 00000 000 0
Q ss_pred cCCCCCCCccccchhhhhhhhccccccccccchhhhcchhhccccchh-hhhccchhhhHHHHHHHHHHHHHHHhhhHHh
Q 015075 153 NQTKLPPGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSF-FMLFSRKLIRTTLLLWVLFFANVFSYYGAVL 231 (413)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (413)
++ +. . ++++.. ++++ . ...+.+ +..++.+. ........++....+++...
T Consensus 229 ~~-~~---------~-~~~~~~---~~~~-----------~-~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~ 279 (467)
T PRK09556 229 GE-PI---------S-EEDKET---ESTD-----------M-TKWQIFVEYVLKNPV---IWLLCFANIFLYIVRIGIDN 279 (467)
T ss_pred cC-cc---------c-hhhhcc---cccc-----------C-cHHHHHHHHHHcChH---HHHHHHHHHHHHHHHHHHHH
Confidence 00 00 0 000000 0000 0 000000 10111111 11122222222223333322
Q ss_pred hhh-hccCCCCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHH--HHHHhcch
Q 015075 232 LTS-KLSSGDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFL--LPLVFHQS 308 (413)
Q Consensus 232 ~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~--~~~~~~~~ 308 (413)
+.+ ++. +.++.+..+.+ .......++.+++.++.|+++||+|||+............. ..+....+
T Consensus 280 ~~p~yl~--------~~~g~s~~~a~---~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~~ 348 (467)
T PRK09556 280 WSPVYAF--------QELGFSKEDAI---NTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQHATS 348 (467)
T ss_pred HHHHHHH--------HccCCCHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhcCc
Confidence 222 221 11222221111 22334555678899999999999998876554333222211 11222223
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhheecccccccchhhhHHHHHHhhhhh-hHhHHHHHHHHHhh------------ccchh
Q 015075 309 AVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKV-GGMVCPLVAVGLVT------------SCHLR 375 (413)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~-~~~~~p~~~~~l~~------------~~~~~ 375 (413)
........+..+++..+..........|.+|++.|+++.|+.+.++++ +++++|.+.+.+.+ ..++.
T Consensus 349 ~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~ 428 (467)
T PRK09556 349 EYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWA 428 (467)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChH
Confidence 222223333333333333333345667999999999999999999997 66999999999988 44555
Q ss_pred HHHHHHHHHHHHHHHHhhccc-cccc
Q 015075 376 LAVILFEVVFVLAIASSLLFP-FETM 400 (413)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~-~et~ 400 (413)
..+.++.++.+++.+..+++. .|++
T Consensus 429 ~~f~~~~~~~~~~~~~~~~~~~~~~~ 454 (467)
T PRK09556 429 GTFAALDIAAIGCICLMAIVAVMEER 454 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666666666666655555442 4554
No 25
>TIGR00895 2A0115 benzoate transport.
Probab=99.96 E-value=1.8e-27 Score=226.53 Aligned_cols=330 Identities=26% Similarity=0.378 Sum_probs=214.6
Q ss_pred ccccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHHHH
Q 015075 2 LLGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVA 80 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~ 80 (413)
++++++.|+++||+|||+++..+.++..++.++.+++++++.+++.|++.|++.|.. +...+++.|++|+++|++..++
T Consensus 66 ~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 145 (398)
T TIGR00895 66 AFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGL 145 (398)
T ss_pred HHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhh
Confidence 467889999999999999999999999999999999999999999999999998875 6778899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHH-HHHHHhhcCCCCchHHhhccChHHHHHHHHHHHHHcCCCCCC
Q 015075 81 LSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSF-ALLLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPP 159 (413)
Q Consensus 81 ~~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~-~~~~~~~~~pEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~ 159 (413)
...+..+|..+++.+++.+.+..+||+.|++.++..+ ...+...++||+|++..++ +.+++.+..++.....+++..
T Consensus 146 ~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~- 223 (398)
T TIGR00895 146 MFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLPESIDFLVSK-RPETVRRIVNAIAPQMQAEAQ- 223 (398)
T ss_pred HhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHHHHHhCCCCChHHHhc-CHHHHHHHHHHHHHhcccccc-
Confidence 9999999999999999998888999999988865444 4455667789998876554 333333333333221111000
Q ss_pred CccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhccchhhhHHHHHHHHHHHHHHHhhhHHhhhhhccCC
Q 015075 160 GILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSG 239 (413)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 239 (413)
.+.++++ .+ . +......+.++.++..+.....+...+.....++....+.+.+..
T Consensus 224 --------~~~~~~~-----~~--------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 278 (398)
T TIGR00895 224 --------SALPEQK-----AT--------Q---GTKRSVFKALFQGKTARITVLLWLLYFMLLVGVYFLTNWLPKLMV- 278 (398)
T ss_pred --------ccccccc-----cc--------c---chhhHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 0000000 00 0 000011222333333333344444443333333333222222211
Q ss_pred CCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHH
Q 015075 240 DNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGV 319 (413)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (413)
..+.+... .........++.+++.++.++++||+|||.......+.............+........+..
T Consensus 279 -------~~g~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (398)
T TIGR00895 279 -------ELGFSLSL---AATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVLVGSTLFSPTLLLLLGAIA 348 (398)
T ss_pred -------HcCCCHHH---HHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHH
Confidence 11111111 12223455667788999999999999999544433333322222222122322223333344
Q ss_pred HHHhhhhhhhhheecccccccchhhhHHHHHHhhhhhhHhHHHHHHHHH
Q 015075 320 RMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGL 368 (413)
Q Consensus 320 ~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l 368 (413)
.++.....+..+.+..|.+|++.|+++.|+.+.++++++.++|.+.+.+
T Consensus 349 g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 349 GFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 4445555677888999999999999999999999999999999988754
No 26
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.96 E-value=1.6e-27 Score=228.56 Aligned_cols=344 Identities=13% Similarity=0.064 Sum_probs=223.8
Q ss_pred ccccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhh-----cccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcc
Q 015075 2 LLGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSF-----SPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRG 75 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~-----a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg 75 (413)
.+++++.|+++||+|||+++..+.++.+++.+..+. .++++.+++.|+++|++.|.. +...+++.|+.|+++|+
T Consensus 66 ~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 145 (417)
T PRK10489 66 FIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLM 145 (417)
T ss_pred HHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHH
Confidence 367889999999999999998888777776655432 578899999999999987654 56677889999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHHHHHhhcCCCCchHHhhccChHHHHHHHHHHHHHcCC
Q 015075 76 RWMVALSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFALLLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQT 155 (413)
Q Consensus 76 ~~~~~~~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~~~~~~~~pEsp~~l~~~~~~~~a~~~~~~~~~~~~~ 155 (413)
+..++.+...++|..+++.+++.+.+..+||+.|++.++..++..+..+.+||+++.. +++
T Consensus 146 ~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~----------------- 206 (417)
T PRK10489 146 QAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPLLRLPALPPPP--QPR----------------- 206 (417)
T ss_pred HHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhCCCCCCCC--ccc-----------------
Confidence 9999999999999999999999988888999999888777666666666777764310 000
Q ss_pred CCCCCccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhccchhhhHHHHHHHHHHHHHHHhhhHHhhhhh
Q 015075 156 KLPPGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSK 235 (413)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (413)
+++ .++. .+.++..++++..+........ ... ......+.+.
T Consensus 207 ---------~~~--~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~p~ 248 (417)
T PRK10489 207 ---------EHP--LRSL-----------------------LAGFRFLLASPVVGGIALLGGL---LTM-ASAVRVLYPA 248 (417)
T ss_pred ---------ccc--hHHH-----------------------HHHHHHHHcChHHHHHHHHHHH---HHH-HHhHHHhhHH
Confidence 000 0000 0011112222222211111111 110 1111111111
Q ss_pred ccCCCCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHHHHHH
Q 015075 236 LSSGDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVL 315 (413)
Q Consensus 236 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (413)
+. .+.++.+....+ .......++.+++.++.+++.||.++++.+..+.+...+..+.+...++.......
T Consensus 249 ~~-------~~~~g~~~~~~g---~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (417)
T PRK10489 249 LA-------DEVWQMGAAQIG---LLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLC 318 (417)
T ss_pred HH-------HhccCCChhHhH---HHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHH
Confidence 11 011222222222 12234456677888999999999777666655554444333333333333222222
Q ss_pred HHHHHHHhhhhhhhhheecccccccchhhhHHHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHhhcc
Q 015075 316 LFGVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLF 395 (413)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (413)
.+...++.....+...++..|..|++.|+++.|+.+...+++..++|.+.+.+.+..+....+..++++..+..++....
T Consensus 319 ~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 398 (417)
T PRK10489 319 LALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLV 398 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHh
Confidence 22222222222344567889999999999999999999999999999999999888777777777777766666666677
Q ss_pred cccccCcchhhhhhhhc
Q 015075 396 PFETMGRELKDTVDAIE 412 (413)
Q Consensus 396 ~~et~~~~l~~~~~~~~ 412 (413)
.||++++++||+++|..
T Consensus 399 ~~~~~~~~~~~~~~~~~ 415 (417)
T PRK10489 399 LGELRRFRQTPPEVDAS 415 (417)
T ss_pred cccccccccccccCCCC
Confidence 79999999999998864
No 27
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.96 E-value=1.7e-27 Score=226.28 Aligned_cols=342 Identities=17% Similarity=0.231 Sum_probs=209.9
Q ss_pred ccccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHHHH
Q 015075 2 LLGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVA 80 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~ 80 (413)
.+++++.|+++||+|||+++..+.++++++.++.++++|++.+++.|+++|++.|.. +....++.|++|+++|++.+++
T Consensus 43 ~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 122 (399)
T TIGR00893 43 VVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSI 122 (399)
T ss_pred HHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHH
Confidence 367889999999999999999999999999999999999999999999999998875 6777899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHHH-HHhhcCCCCchHHhhccChHHHHHHHHHHHHHcCCCCCC
Q 015075 81 LSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFALL-LFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPP 159 (413)
Q Consensus 81 ~~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~~-~~~~~~pEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~ 159 (413)
.+....+|.++++.+++.+.+..+||+.|++.+++.++.. ...+..||+|+. +++.++.++.... ++..
T Consensus 123 ~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~------~~~~- 192 (399)
T TIGR00893 123 FNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVLWLKFIPDPPQK---AKWLTEEEKYIVV------GGLL- 192 (399)
T ss_pred HHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhheecCCCCc---cccCCHHHHhhcc------hhhc-
Confidence 9999999999999999988888999999998887776543 344556776541 1110110000000 0000
Q ss_pred Cccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhcc-chhhhHHHHHHHHHHHHHHHhhhHHhhhh-hcc
Q 015075 160 GILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFS-RKLIRTTLLLWVLFFANVFSYYGAVLLTS-KLS 237 (413)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~ 237 (413)
.+.+ ++ + + .+......+..++ ++... .....+.....+.....+.+ .+.
T Consensus 193 ----~~~~-~~-~------~-------------~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 243 (399)
T TIGR00893 193 ----AEQQ-GK-G------P-------------STPKKYQIKELLKDRRVWG----LALGQFLVNIGLGFFLTWFPTYLV 243 (399)
T ss_pred ----cccc-cc-c------c-------------cCCCccchHHHhcCHHHHH----HHHHHHHHHhHHHHHHHHHHHHHH
Confidence 0000 00 0 0 0000111222222 22211 11111222222222111111 111
Q ss_pred CCCCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhChhH--HHHHHH-H-HHHH-H-HHHHHhc-chhH
Q 015075 238 SGDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKL--SMVLMF-V-SACI-F-LLPLVFH-QSAV 310 (413)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~--~~~~~~-~-~~~~-~-~~~~~~~-~~~~ 310 (413)
. ..+.+.... ........+..+++.++.+++.||++||+ ...... . .... . ....... .+..
T Consensus 244 ~--------~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (399)
T TIGR00893 244 Q--------ERGLSILEA---GFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVNIP 312 (399)
T ss_pred H--------HhcccHHHh---hHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccchhH
Confidence 0 011111111 12233455667788999999999999985 111111 1 1101 1 1111111 1111
Q ss_pred HHHHHHHHHHHHhhhhhhhhheecccccccchhhhHHHHHHhhhhhhHhHHHHHHHHHhhccc-hhHHHHHHHHHHHHHH
Q 015075 311 VTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCH-LRLAVILFEVVFVLAI 389 (413)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~-~~~~~~~~~~~~~~~~ 389 (413)
...........+..+..+..+.+.+|.+|++.|+++.|+.+.+.++++.++|.+.+.+.+..+ ....+++.+++.+++.
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~ 392 (399)
T TIGR00893 313 YAALALVALGFFGLGAGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGA 392 (399)
T ss_pred HHHHHHHHHHHhchhhhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHH
Confidence 112222222233333567788899999999999999999999999999999999998888776 5555666666666555
Q ss_pred HHhh
Q 015075 390 ASSL 393 (413)
Q Consensus 390 ~~~~ 393 (413)
+..+
T Consensus 393 ~~~~ 396 (399)
T TIGR00893 393 LSYL 396 (399)
T ss_pred HHHH
Confidence 5443
No 28
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.96 E-value=3.5e-26 Score=217.30 Aligned_cols=328 Identities=13% Similarity=0.104 Sum_probs=209.7
Q ss_pred ccccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHHHH
Q 015075 2 LLGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVA 80 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~ 80 (413)
.+++++.|+++||+|||+++..+..+++++.+++++++|++.+++.|+++|++.|.. +....++.|++| ++|+++++.
T Consensus 58 ~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~ 136 (393)
T PRK09705 58 GGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGL 136 (393)
T ss_pred HHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHH
Confidence 367889999999999999999999999999999999999999999999999998875 555677889987 889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCC-ChHHHHHHhhHHHHHHHHHhhcCC-CCchHHhhccChHHHHHHHHHHHHHcCCCCC
Q 015075 81 LSAFWTAGTIFEASLAWVVMTRL-NWRWLLAFSSVPSFALLLFYGLAP-ESPRYLCAKARTVDAHRILEKMAFVNQTKLP 158 (413)
Q Consensus 81 ~~~~~~~G~~~~~~l~~~l~~~~-~Wr~~f~~~~i~~~~~~~~~~~~p-Esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~ 158 (413)
+..+...|..+++.++..+.++. +||+.+.+.+++.++....++... +.|+
T Consensus 137 ~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------- 189 (393)
T PRK09705 137 WSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVALFAWWWQSAREVA--------------------------- 189 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhcCCCc---------------------------
Confidence 99999999999999888887765 899988765555444333222211 1110
Q ss_pred CCccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhccchhhhHHHHHHHHHHHHHHHhhhHHhhhhhccC
Q 015075 159 PGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSS 238 (413)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 238 (413)
+++ . ++. . . .+.+.+++.+ ......+.....++....+.+.+..
T Consensus 190 ------~~~--~-~~~------~--------------~---~~~l~~~~~~----~l~~~~~~~~~~~~~~~~~lp~~l~ 233 (393)
T PRK09705 190 ------SSH--K-TTT------T--------------P---VRVVFTPRAW----TLGVYFGLINGGYASLIAWLPAFYI 233 (393)
T ss_pred ------ccc--C-CCc------C--------------C---cccccCHhHH----HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 0 000 0 0 0001111111 1111112222233332222221111
Q ss_pred CCCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHH-hcchhHHHHHHHH
Q 015075 239 GDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLV-FHQSAVVTTVLLF 317 (413)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 317 (413)
. ++.+....+. ...+..++.++|.++.+++.||.+||+....+.....+....+. ...+..... .+
T Consensus 234 ~--------~g~s~~~ag~---~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~ 300 (393)
T PRK09705 234 E--------IGASAQYSGS---LLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPVLW--AM 300 (393)
T ss_pred H--------cCCChhhhhH---HHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHHHH--HH
Confidence 0 1222222222 23455667788999999999999999877766555444333222 222221111 11
Q ss_pred HHHHHhhhhhhhhheeccccc-ccchhhhHHHHHHhhhhhhHhHHHHHHHHHhhccch-hHHHHHHHHHHHHHHHHhhcc
Q 015075 318 GVRMCVTGTITVATIYAPEIY-PTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHL-RLAVILFEVVFVLAIASSLLF 395 (413)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~e~~-p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 395 (413)
...+...+..+.......+.. |++.|++..|+.+.++++++.++|.+.+.+.|..+. ...+.+..+++++..+..+.+
T Consensus 301 l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (393)
T PRK09705 301 VCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRF 380 (393)
T ss_pred HHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHh
Confidence 222222233344444455666 467899999999999999999999999999998764 344555556666667777788
Q ss_pred cccccCcchhh
Q 015075 396 PFETMGRELKD 406 (413)
Q Consensus 396 ~~et~~~~l~~ 406 (413)
+|||.+|.+.+
T Consensus 381 ~~~~~~~~~~~ 391 (393)
T PRK09705 381 APARFPQLWVK 391 (393)
T ss_pred ccccccchhcc
Confidence 99998887654
No 29
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.96 E-value=2.9e-26 Score=218.63 Aligned_cols=324 Identities=13% Similarity=0.080 Sum_probs=205.8
Q ss_pred ccccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhc--------ccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCC
Q 015075 2 LLGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFS--------PNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVS 72 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a--------~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~ 72 (413)
.+++++.|+++||+|||+++..+.++++++.++++++ .+++.+++.|+++|++.+.. +...+++.|+.|++
T Consensus 65 ~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~ 144 (399)
T PRK05122 65 LLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGAL 144 (399)
T ss_pred HHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChh
Confidence 3678899999999999999999999888877766543 25778999999999998875 66678889999999
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHHHHHhhcCCCCchHHhhccChHHHHHHHHHHHHH
Q 015075 73 HRGRWMVALSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFALLLFYGLAPESPRYLCAKARTVDAHRILEKMAFV 152 (413)
Q Consensus 73 ~Rg~~~~~~~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~~~~~~~~pEsp~~l~~~~~~~~a~~~~~~~~~~ 152 (413)
+|++++++.+.....|.++++.+++.+.+..|||+.+++..+..++........||+++ ++++
T Consensus 145 ~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-------------- 207 (399)
T PRK05122 145 HTGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLALLGLLLARPRPAVPP---VKGE-------------- 207 (399)
T ss_pred hhccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCCCC---CCcc--------------
Confidence 99999999999999999999999999988999999988766655443333332333221 0000
Q ss_pred cCCCCCCCccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhccchhhhHHHHHHHHHHHHHHHhhhHH-h
Q 015075 153 NQTKLPPGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAV-L 231 (413)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 231 (413)
+.+ . + +.++ +...... ... ...+.+.... +
T Consensus 208 ------------~~~--~-----------------------~---~~~~-----~~~~~~~-~~~---~~~~~~~~~~~~ 238 (399)
T PRK05122 208 ------------RLP--F-----------------------R---RVLG-----RVWPYGM-GLA---LASIGFGTIATF 238 (399)
T ss_pred ------------chh--H-----------------------H---HHHH-----HHHHHHH-HHH---HHHHHHHHHHHH
Confidence 000 0 0 0000 0000000 000 0011111110 1
Q ss_pred hhhhccCCCCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHH
Q 015075 232 LTSKLSSGDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVV 311 (413)
Q Consensus 232 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (413)
...++. . .+. ...+ .......++.+++.++.+++.||+|||+.+..+.....+....+...++...
T Consensus 239 ~~~~~~-~--------~~~--~~~~---~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (399)
T PRK05122 239 ITLYYA-A--------RGW--DGAA---LALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWM 304 (399)
T ss_pred HHHHHH-H--------ccc--ccch---HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 111110 0 011 1111 1122345556778899999999999998877665555444433333333332
Q ss_pred HHHHHHHHHHHhhhhhhhhheecccccccchhhhHHHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHH
Q 015075 312 TTVLLFGVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIAS 391 (413)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 391 (413)
.....+...++.....+.......|..|++.|+++.|+.+...++++.++|.+.+.+.+..+....+++.+++.+++.+.
T Consensus 305 ~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~ 384 (399)
T PRK05122 305 ALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLAL 384 (399)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHH
Confidence 22222222233333344444566789999999999999999999999888888888888777777777777777776666
Q ss_pred hhcccccccCcchhh
Q 015075 392 SLLFPFETMGRELKD 406 (413)
Q Consensus 392 ~~~~~~et~~~~l~~ 406 (413)
..++ +++++|+.+|
T Consensus 385 ~~~~-~~~~~~~~~~ 398 (399)
T PRK05122 385 TWLL-YRRAPRAVPE 398 (399)
T ss_pred HHHh-cccccccCCC
Confidence 5554 5666666655
No 30
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.96 E-value=1.9e-26 Score=226.21 Aligned_cols=370 Identities=20% Similarity=0.267 Sum_probs=215.5
Q ss_pred ccccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHHHH
Q 015075 2 LLGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVA 80 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~ 80 (413)
++++++.|+++||+|||+++..+.++++++.++.++++|++.+++.|+++|++.++. +....++.|++|+++|++..++
T Consensus 69 ~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 148 (496)
T PRK03893 69 WFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGF 148 (496)
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHH
Confidence 357788999999999999999999999999999999999999999999999988765 6677889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHHHHHhhcCCCCchHHhhccChHHHHHHHHHHHHHcCCCCCCC
Q 015075 81 LSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFALLLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPG 160 (413)
Q Consensus 81 ~~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~~~~~~~~pEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~ 160 (413)
...+..+|..+++.+++.+.+.++||+.|++..++.++..+.....||++++..++++.++..+..+.....+
T Consensus 149 ~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~------- 221 (496)
T PRK03893 149 LISGFSIGAVVAAQVYSLVVPVWGWRALFFIGILPIIFALWLRKNLPEAEDWKEKHAGKAPVRTMVDILYRGE------- 221 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhCCCchhhhhhccccccchhHHHHHhcch-------
Confidence 9999999999999999999899999999998766665555566678888765432222111111100000000
Q ss_pred ccccchhhhhhhhccccccccccchhhhcchhhccccc-------------hhhhhccchhhhHHHHHHHHHHHHHHHhh
Q 015075 161 ILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFS-------------SFFMLFSRKLIRTTLLLWVLFFANVFSYY 227 (413)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (413)
............ ...............+. .......++............+......+
T Consensus 222 ------~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (496)
T PRK03893 222 ------HRIINILLTLAA---AAALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSW 292 (496)
T ss_pred ------hHHHHHHHHHHH---HHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccc
Confidence 000000000000 00000000000000000 00000000000000011111111110001
Q ss_pred hH-HhhhhhccCCCCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhc
Q 015075 228 GA-VLLTSKLSSGDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFH 306 (413)
Q Consensus 228 ~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~ 306 (413)
.. .+++.++.. ..+.+. ...........++.+++.++.|+++||+|||+.+..+.++..+..+.+...
T Consensus 293 ~~~~~lp~~l~~--------~~g~~~---~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~ 361 (496)
T PRK03893 293 PIQALLPTYLKT--------DLGYDP---HTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAI 361 (496)
T ss_pred hHHHHHHHHHHh--------hcCCCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhc
Confidence 11 112222211 111111 112223344556677899999999999999988776655544333322221
Q ss_pred -c-hhHHHHHHHHHHHHHhhhhhhhhheecccccccchhhhHHHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHHHHHH
Q 015075 307 -Q-SAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVV 384 (413)
Q Consensus 307 -~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~ 384 (413)
. +........+....+..+..+....+..|.+|++.|+++.|+.+..+.+++.++|.+.+.+.+..+....+...+.+
T Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~ 441 (496)
T PRK03893 362 GGANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFS 441 (496)
T ss_pred cccHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHH
Confidence 1 21212222222222333344556667889999999999999999999999999999999888877765555444433
Q ss_pred H-HHHHHHhhccccc
Q 015075 385 F-VLAIASSLLFPFE 398 (413)
Q Consensus 385 ~-~~~~~~~~~~~~e 398 (413)
. +++.+...+..|+
T Consensus 442 ~~~~~~~~~~~~~~~ 456 (496)
T PRK03893 442 LTFVVILLIGLDMPS 456 (496)
T ss_pred HHHHHHHHHHhcCcH
Confidence 3 3333333343443
No 31
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.96 E-value=1.3e-26 Score=220.13 Aligned_cols=306 Identities=23% Similarity=0.331 Sum_probs=194.7
Q ss_pred ccccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHH--------HHHHHHHHhhhcccch-hHHHHHHHhhccCC
Q 015075 2 LLGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYV--------SLVIFRCFVGVGLGGV-PVFLAYFLEFVPVS 72 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~--------~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~ 72 (413)
.+|+++.|+++||+|||+++..+.++..++.+++++++++. .+++.|+++|++.|.. +....++.|++|++
T Consensus 49 ~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~ 128 (394)
T TIGR00883 49 PLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPG 128 (394)
T ss_pred hhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcc
Confidence 36889999999999999999999999999999999999976 4889999999998875 66778999999999
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHh--------cCCChHHHHHHhhHHHHHHHHHhhcCCCCchHHhhccChHHHHH
Q 015075 73 HRGRWMVALSAFWTAGTIFEASLAWVVM--------TRLNWRWLLAFSSVPSFALLLFYGLAPESPRYLCAKARTVDAHR 144 (413)
Q Consensus 73 ~Rg~~~~~~~~~~~~G~~~~~~l~~~l~--------~~~~Wr~~f~~~~i~~~~~~~~~~~~pEsp~~l~~~~~~~~a~~ 144 (413)
+|++..+..+.+..+|.++++.++..+. +.++||+.|++.++..++........||+|++..++++.
T Consensus 129 ~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 203 (394)
T TIGR00883 129 KRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGLYLRRNLEETPVFEKAQEKH----- 203 (394)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHhcc-----
Confidence 9999999999999999999988776543 357999999988777666666666678876532110000
Q ss_pred HHHHHHHHcCCCCCCCccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhccchhhhHHHHHHHHHHHHHH
Q 015075 145 ILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVF 224 (413)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (413)
+ +.+ ...+..++++. +.........+....
T Consensus 204 -----------~---------------~~~-----------------------~~~~~~~~~~~-~~~~~~~~~~~~~~~ 233 (394)
T TIGR00883 204 -----------K---------------KKR-----------------------GPIRETLTKHR-KPFLLGLGLVIATTT 233 (394)
T ss_pred -----------c---------------ccc-----------------------CCHHHHHHhch-HHHHHHHHHHHHHHH
Confidence 0 000 00001111110 111111122222222
Q ss_pred HhhhHHh-hhhhccCCCCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHH--H
Q 015075 225 SYYGAVL-LTSKLSSGDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFL--L 301 (413)
Q Consensus 225 ~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~--~ 301 (413)
.++.... .+..+.. .++.+. ...........+...++.++.|+++||+|||+..........+.. .
T Consensus 234 ~~~~~~~~~~~~~~~--------~~g~~~---~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~ 302 (394)
T TIGR00883 234 TFYLITTYLPTYLTQ--------TLGLSA---NSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPL 302 (394)
T ss_pred HHHHHHHHHHHHHHH--------hcCCCh---hHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHH
Confidence 2222211 1111110 111111 111222344556677788899999999999987664433322211 1
Q ss_pred HHHh--cchhHHHHHHHHHHHHHhhhhhhhhheecccccccchhhhHHHHHHhhh-hhhHhHHHHHHHHHhhccc
Q 015075 302 PLVF--HQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLG-KVGGMVCPLVAVGLVTSCH 373 (413)
Q Consensus 302 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~-~~~~~~~p~~~~~l~~~~~ 373 (413)
.... ..+............++.....+..+.+.+|.+|++.|+++.++.+.++ .+++.++|.+.+.+.+..+
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g 377 (394)
T TIGR00883 303 LMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTG 377 (394)
T ss_pred HHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcC
Confidence 1111 1222222222233333333455667888999999999999999876665 5678899999998888766
No 32
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.95 E-value=2.4e-26 Score=217.12 Aligned_cols=317 Identities=16% Similarity=0.192 Sum_probs=202.9
Q ss_pred ccccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHHHH
Q 015075 2 LLGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVA 80 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~ 80 (413)
.++++++|+++||+|||+++..+.++.+++.+++++++|++.+++.|+++|++.|.. +....++.|++| ++|+++.++
T Consensus 52 ~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 130 (377)
T TIGR00890 52 AMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGI 130 (377)
T ss_pred HHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHH
Confidence 468899999999999999999999999999999999999999999999999998864 556677888887 679999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHHHHH-hhcCCCCchHHhhccChHHHHHHHHHHHHHcCCCCCC
Q 015075 81 LSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFALLLF-YGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPP 159 (413)
Q Consensus 81 ~~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~~~~-~~~~pEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~ 159 (413)
...+..+|..+++++...+.+..+||+.|++.+++.++.... .++++|.|+. .++ ++
T Consensus 131 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~-~~~------------------~~--- 188 (377)
T TIGR00890 131 IIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLGAFLIGYPPGQ-LIK------------------TN--- 188 (377)
T ss_pred HHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHheecCchh-ccc------------------cC---
Confidence 999999999887777766677789999999988887665443 3444443320 000 00
Q ss_pred Cccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhc-cchhhhHHHHHHHHHHHHHHHhhh-HHhhhhhcc
Q 015075 160 GILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLF-SRKLIRTTLLLWVLFFANVFSYYG-AVLLTSKLS 237 (413)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~ 237 (413)
+ +.++++ ...+..+ +++... .....+...+.+.. .........
T Consensus 189 -----~---~~~~~~-----------------------~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 233 (377)
T TIGR00890 189 -----I---EVSVKD-----------------------YTVWEMLRTPQFWV----LYLSFFLNAVSGLLLIGLYKPYGQ 233 (377)
T ss_pred -----c---ccchhh-----------------------hhHHHHHcCccHHH----HHHHHHHHhHHHHHHHHHHHHHHH
Confidence 0 000000 0001111 111111 11111111111111 111111110
Q ss_pred CCCCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcch--hHHHHHH
Q 015075 238 SGDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQS--AVVTTVL 315 (413)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 315 (413)
..+. ++........+..+..+++.++.|++.||+|||+.+..+.+...+....+...++ .......
T Consensus 234 ---------~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (377)
T TIGR00890 234 ---------SLGL---SDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLAT 301 (377)
T ss_pred ---------HcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHH
Confidence 0111 1111122234555667788999999999999998877766655544443333221 1111111
Q ss_pred HHHHHHHhhhhhhhhheecccccccchhhhHHHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHHHHHHHHHH
Q 015075 316 LFGVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLA 388 (413)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~ 388 (413)
.....++.....+....+.+|.+|++.|+++.|+.+...++++.++|.+.+.+.+..+....+.+.+++.+++
T Consensus 302 ~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 302 VALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTS 374 (377)
T ss_pred HHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHh
Confidence 2222233333344556788999999999999999999999999999999998888777666666655555443
No 33
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.95 E-value=5.7e-26 Score=219.82 Aligned_cols=350 Identities=16% Similarity=0.186 Sum_probs=201.7
Q ss_pred ccccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcc----cHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcch
Q 015075 2 LLGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSP----NYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGR 76 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~----~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~ 76 (413)
.++++++|+++||+|||+++..+.++++++.++.++++ +++.+++.|+++|++.|.. +.....+.|++|+++|++
T Consensus 77 ~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~ 156 (452)
T PRK11273 77 GFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGG 156 (452)
T ss_pred HHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHH
Confidence 46889999999999999999999999999999888764 7888999999999988764 656677899999999999
Q ss_pred HHHHHHHHHHHHHH-HHHHHHHHHhcCCChHHHHHHhhHHHHHH-HHHhhcCCCCchHHhhccChHHHHHHHHHHHHHcC
Q 015075 77 WMVALSAFWTAGTI-FEASLAWVVMTRLNWRWLLAFSSVPSFAL-LLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQ 154 (413)
Q Consensus 77 ~~~~~~~~~~~G~~-~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~-~~~~~~~pEsp~~l~~~~~~~~a~~~~~~~~~~~~ 154 (413)
.+++++.+..+|.. .+++++..+....+||+.|++.+++.++. .+..+++||+|+....+.+ +|.+
T Consensus 157 ~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~----------- 224 (452)
T PRK11273 157 IVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAFAMMRDTPQSCGLPPI-EEYK----------- 224 (452)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCCCCh-hhhh-----------
Confidence 99999999998864 44444333333459999999888776654 5566778998864211100 0000
Q ss_pred CCCCCCccccchhhhhhhhccccccccccchhhhcchhhccccchh-hhhccchhhhHHHHHHHHHHHHHHHhhhHHh-h
Q 015075 155 TKLPPGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSF-FMLFSRKLIRTTLLLWVLFFANVFSYYGAVL-L 232 (413)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 232 (413)
++.+ + +.+.+++ ++ ++..+.+ +..++.+... ......+.....+++... .
T Consensus 225 ~~~~------~-~~~~~~~-----~~-------------~~~~~~~~~~~~~~~~~~---~~~l~~~~~~~~~~~~~~~~ 276 (452)
T PRK11273 225 NDYP------D-DYNEKHE-----QE-------------LTAKQIFMQYVLPNKLLW---YIAIANVFVYLLRYGILDWS 276 (452)
T ss_pred hccc------c-ccccccC-----CC-------------ccHHHHHHHHHHcChHHH---HHHHHHHHHHHHHHHHHHHH
Confidence 0000 0 0000000 00 0000000 1111111111 111111111122222222 2
Q ss_pred hhhccCCCCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHh--ChhHHHH-HHHHHHHHHHHHHHh--cc
Q 015075 233 TSKLSSGDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKI--GRKLSMV-LMFVSACIFLLPLVF--HQ 307 (413)
Q Consensus 233 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~--grr~~~~-~~~~~~~~~~~~~~~--~~ 307 (413)
+..+.. ..+.+....+ ....+..++.+++.++.|+++||+ +||.... ..+....+....+.. ..
T Consensus 277 P~~l~~--------~~g~s~~~~~---~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~ 345 (452)
T PRK11273 277 PTYLKE--------VKHFALDKSS---WAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAG 345 (452)
T ss_pred HHHHHH--------hcCCCHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhccc
Confidence 222211 1122212111 223345566778899999999999 5554322 211111111111111 11
Q ss_pred hhHHHHHHHHHHHHHhhhhhhhhheecccccccchhhhHHHHHHhhhhhhHhH-HHHHHHHHhhccchhHHHHHHHHHHH
Q 015075 308 SAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKVGGMV-CPLVAVGLVTSCHLRLAVILFEVVFV 386 (413)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~~-~p~~~~~l~~~~~~~~~~~~~~~~~~ 386 (413)
+........+.......+.......+..|.+|++.|+++.|+.+..+++++.+ +|.+.+.+.|..+....+++..++++
T Consensus 346 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~ 425 (452)
T PRK11273 346 NPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSI 425 (452)
T ss_pred ChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHH
Confidence 22222222222222222222233445679999999999999999999998765 79999999888877777777766666
Q ss_pred HHHHHhh-cccccccCc
Q 015075 387 LAIASSL-LFPFETMGR 402 (413)
Q Consensus 387 ~~~~~~~-~~~~et~~~ 402 (413)
++.+... +..+|+|++
T Consensus 426 ~~~~~~~~~~~~~~~~~ 442 (452)
T PRK11273 426 LAVILLIVVMIGEKRHH 442 (452)
T ss_pred HHHHHHHHHhccccchH
Confidence 6655554 444555543
No 34
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.95 E-value=7.2e-26 Score=220.05 Aligned_cols=330 Identities=12% Similarity=0.069 Sum_probs=192.5
Q ss_pred ccccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccchhHHHHHHHhhccCCCcchHHHHH
Q 015075 2 LLGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGVPVFLAYFLEFVPVSHRGRWMVAL 81 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~~~~~~~~~E~~p~~~Rg~~~~~~ 81 (413)
.+|+++.|+++||+|||+++..+.++++++.+++++++++..+++.|+++|++.+.......++.|++|+++||+++++.
T Consensus 85 ~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s~~~l~~~r~l~G~~~~~~~~~~~~i~~~~~~~~rg~a~g~~ 164 (476)
T PLN00028 85 IFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVSSATGFIAVRFFIGFSLATFVSCQYWMSTMFNGKIVGTANGIA 164 (476)
T ss_pred HHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhHHHHHHHHHhcChhheeHHHHHH
Confidence 35788999999999999999999999999999999999999999999999998876544456789999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHh----c-----CCChHHHHHHhhHHHHHHHHHhhcCCC-CchHHhhccChHHHHHHHHHHHH
Q 015075 82 SAFWTAGTIFEASLAWVVM----T-----RLNWRWLLAFSSVPSFALLLFYGLAPE-SPRYLCAKARTVDAHRILEKMAF 151 (413)
Q Consensus 82 ~~~~~~G~~~~~~l~~~l~----~-----~~~Wr~~f~~~~i~~~~~~~~~~~~pE-sp~~l~~~~~~~~a~~~~~~~~~ 151 (413)
.....+|..+++.+...+. . ..|||+.|++.+++.++..+..++++| .|+ ++.++ ..+
T Consensus 165 ~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~p~-----~~~~~-------~~~ 232 (476)
T PLN00028 165 AGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTLGQDLPD-----GNYRE-------LKK 232 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHcCcCCC-----Cchhh-------HHh
Confidence 8777777776655544332 1 258999999988887765544444443 332 00000 000
Q ss_pred HcCCCCCCCccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhc-cchhhhHHHHHHHHHHHHHHHhhhHH
Q 015075 152 VNQTKLPPGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLF-SRKLIRTTLLLWVLFFANVFSYYGAV 230 (413)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (413)
+.+. ++. +....++..+ .++. ...+..++......+...
T Consensus 233 -------------------~~~~----~~~-------------~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 272 (476)
T PLN00028 233 -------------------SGTM----PKD-------------SFSKVLRYGVTNYRT----WILALTYGYSFGVELTMD 272 (476)
T ss_pred -------------------cCcc----ccc-------------cHHHHHHHHHcCchh----HHHHHHHHHHHHHHHHHH
Confidence 0000 000 0000111111 1121 112222222222212211
Q ss_pred h-hhhhccCCCCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhChhH-------HHHHHHHHHHHHHHH
Q 015075 231 L-LTSKLSSGDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKL-------SMVLMFVSACIFLLP 302 (413)
Q Consensus 231 ~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~-------~~~~~~~~~~~~~~~ 302 (413)
. .+.++. +.++.+.. .......+..++..++.+++|+++||++||. .......+..+.++.
T Consensus 273 ~~~p~~l~--------~~~g~s~~---~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~ 341 (476)
T PLN00028 273 NIIAEYFY--------DRFGLSLE---TAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIW 341 (476)
T ss_pred hHHHHHHH--------HhcCCCHH---HHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHH
Confidence 1 112111 01111111 1122334556677889999999999998752 222222222222222
Q ss_pred HHhcchhHHHHHHHHHHHHHhhhhhhhhheecccccccchhhhHHHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHHHH
Q 015075 303 LVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFE 382 (413)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~ 382 (413)
+....+.......++...++.....+..+.+.+|+.| +.|++..|+.+..+++|++++|.+.+ ..+..++...+++++
T Consensus 342 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~ 419 (476)
T PLN00028 342 LGRANSLGAAIVVMILFSIFVQAACGATFGIVPFVSR-RSLGVISGLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMG 419 (476)
T ss_pred hcccchHHHHHHHHHHHHHHHHHhhhhhcccCcccCh-hhchhhhhhhhccccHHHHHHHHHHH-hcCCccHhhHHHHHH
Confidence 2222222222222222223333344556677778765 68999999999999999988887654 212223456677777
Q ss_pred HHHHHHHHHhhccc
Q 015075 383 VVFVLAIASSLLFP 396 (413)
Q Consensus 383 ~~~~~~~~~~~~~~ 396 (413)
++.+++.++.++..
T Consensus 420 ~~~~i~~~~~~~~~ 433 (476)
T PLN00028 420 VMIIACTLPVAFIH 433 (476)
T ss_pred HHHHHHHHHHHhee
Confidence 77777766666553
No 35
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.95 E-value=3.6e-25 Score=202.23 Aligned_cols=320 Identities=19% Similarity=0.258 Sum_probs=213.1
Q ss_pred cccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHHHHH
Q 015075 3 LGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVAL 81 (413)
Q Consensus 3 ~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~ 81 (413)
+|+++...+.||+.||++++..+.++.++++++++++||+.++++|++.|++.|.+ +...++..+..||++|+++.++.
T Consensus 63 i~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv 142 (394)
T COG2814 63 LGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALV 142 (394)
T ss_pred HHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHH
Confidence 67888899999999999999999999999999999999999999999999999986 67788999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHH-HHHhhcCCCCchHHhhccChHHHHHHHHHHHHHcCCCCCCC
Q 015075 82 SAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFAL-LLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPG 160 (413)
Q Consensus 82 ~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~-~~~~~~~pEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~ 160 (413)
..+..++.++|.+++.++.+.+|||+.|+..+..+++. ...+..+| |+-. .+.+
T Consensus 143 ~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP--~~~~---------------------~~~~-- 197 (394)
T COG2814 143 FTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP--PSEI---------------------SGSL-- 197 (394)
T ss_pred HHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC--CccC---------------------CCCC--
Confidence 99999999999999999999999999999988888765 55667777 3200 0000
Q ss_pred ccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhccchhhhHHHHHHHHHHHHHHHhhhHHhhhhhccCCC
Q 015075 161 ILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGD 240 (413)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 240 (413)
+.+. .+.++.+.+++... .......++...+..| .+..+.+.
T Consensus 198 ------~~~~--------------------------~~~~~~l~~p~v~~-~l~~t~l~~~g~F~~f--tYi~P~L~--- 239 (394)
T COG2814 198 ------PGPL--------------------------RTLLRLLRRPGVLL-GLLATFLFMTGHFALY--TYIRPFLE--- 239 (394)
T ss_pred ------Ccch--------------------------hHHHHHhcCchHHH-HHHHHHHHHcchhhhH--HhHHHHHH---
Confidence 0000 00111122222222 2222222222211111 12222221
Q ss_pred CccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHh-cchhHHHHHHHHHH
Q 015075 241 NKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVF-HQSAVVTTVLLFGV 319 (413)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 319 (413)
+..+++. ..........+++..+|.+++|++.|| +.|+.+..........+..+.+ ..+........+..
T Consensus 240 -----~v~g~s~---~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~w 310 (394)
T COG2814 240 -----SVAGFSV---SAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTGASPALALALLFLW 310 (394)
T ss_pred -----HccCCCH---hHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHH
Confidence 1112211 223345567788889999999999999 6666655554443333333333 23333333333332
Q ss_pred HHHhhhhhhhhheecccccccchhhhHHHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHhhcc
Q 015075 320 RMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLF 395 (413)
Q Consensus 320 ~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (413)
.+.............++ .-++.+..+.++.....|+|..++..+.+..+++.+.....+.-+++.+++.++....
T Consensus 311 g~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~ 385 (394)
T COG2814 311 GFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALLS 385 (394)
T ss_pred HHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHH
Confidence 22222222223344445 3357799999999999999999999999999998776666666666666665555443
No 36
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.95 E-value=2.3e-25 Score=216.60 Aligned_cols=339 Identities=13% Similarity=0.185 Sum_probs=202.2
Q ss_pred ccccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhc--ccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHH
Q 015075 2 LLGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFS--PNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWM 78 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a--~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~ 78 (413)
.+++++.|+++||+|||+++..+.++++++.+++.++ .++..+++.|+++|++.|.. +....++.||+|+++|++.+
T Consensus 90 ~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~ 169 (465)
T TIGR00894 90 IIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLL 169 (465)
T ss_pred HHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHH
Confidence 3678899999999999999999999999999887544 56888999999999999875 67788999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcC-CChHHHHHHhhHHHHHHHHH-hhcCCCCchHHhhccChHHHHHHHHHHHHHcCCC
Q 015075 79 VALSAFWTAGTIFEASLAWVVMTR-LNWRWLLAFSSVPSFALLLF-YGLAPESPRYLCAKARTVDAHRILEKMAFVNQTK 156 (413)
Q Consensus 79 ~~~~~~~~~G~~~~~~l~~~l~~~-~~Wr~~f~~~~i~~~~~~~~-~~~~pEsp~~l~~~~~~~~a~~~~~~~~~~~~~~ 156 (413)
++...+..+|.++++++++.+.+. .+||+.|++.+++.+++.+. +.+.+|+|+... +.+.+|. +.+....
T Consensus 170 ~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~----~~i~~~~--- 241 (465)
T TIGR00894 170 GMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIHP-CISKFEK----KYINSSL--- 241 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccCC-CCCHHHH----HHHHhhc---
Confidence 999999999999999999988887 49999999998888766544 444667775211 0110000 0000000
Q ss_pred CCCCccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhccchhhhHHHHHHHHHHHHHHHhhhHHhh-hhh
Q 015075 157 LPPGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLL-TSK 235 (413)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 235 (413)
++++ ++ +.....++..++.+.. ...+...++....++....+ +.+
T Consensus 242 --------------~~~~----~~-------------~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~lp~~ 287 (465)
T TIGR00894 242 --------------QGQK----GS-------------TRQSLPIKAIPKSLPV---WAIWFAIFGHFWLYTILPTYLPTF 287 (465)
T ss_pred --------------cccc----CC-------------CCCCCCHHHHhcCHHH---HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000 00 0000122333322221 11222223333333322222 222
Q ss_pred ccCCCCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhChhHH--------HHHHH--HHHHHHHHHHHh
Q 015075 236 LSSGDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLS--------MVLMF--VSACIFLLPLVF 305 (413)
Q Consensus 236 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~--------~~~~~--~~~~~~~~~~~~ 305 (413)
+. +.++.+....+. ...+..++..++.++.|+++||.++|+. +..+. .......+....
T Consensus 288 l~--------~~~g~s~~~~g~---~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (465)
T TIGR00894 288 IS--------WVLRVSGKENGL---LSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPY 356 (465)
T ss_pred HH--------HHhCcChHHhHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 21 112222222222 2334456677889999999999764421 11111 111111111111
Q ss_pred -cchhHHHHHHHHHHHHHhhhhhhhhheecccccccchhhhHHHHHHhhhhhhHhHHHHHHHHHhhcc--c-hhHHHHHH
Q 015075 306 -HQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSC--H-LRLAVILF 381 (413)
Q Consensus 306 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~--~-~~~~~~~~ 381 (413)
..+......++.....+..+..+..+....|..|+ .++++.|+.+..+.++++++|.+.+.+.+.. + ....+.+.
T Consensus 357 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~ 435 (465)
T TIGR00894 357 LSAAFYLTIIILTLANAVSSGPLAGVLINSLDLAPR-FLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIM 435 (465)
T ss_pred cCCchHHHHHHHHHHHHHhhhhhhhhhhchhhcChh-HHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHH
Confidence 12222222222222222222334455566677775 8999999999999999999999988776643 2 33455556
Q ss_pred HHHHHHHHHHhhc
Q 015075 382 EVVFVLAIASSLL 394 (413)
Q Consensus 382 ~~~~~~~~~~~~~ 394 (413)
+++.+++.++..+
T Consensus 436 ~~~~~i~~i~~~~ 448 (465)
T TIGR00894 436 AFVNILCVIFYLI 448 (465)
T ss_pred HHHHHHHHHHeee
Confidence 6666666555444
No 37
>PRK03699 putative transporter; Provisional
Probab=99.95 E-value=1.7e-25 Score=212.86 Aligned_cols=332 Identities=13% Similarity=0.138 Sum_probs=210.3
Q ss_pred ccccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHHHH
Q 015075 2 LLGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVA 80 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~ 80 (413)
.+|+++.|++.||+|||+++..+.+++.++.+++++++|++.+++.|+++|++.|.. +...+++.|++|+++|++..+.
T Consensus 56 ~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~ 135 (394)
T PRK03699 56 LISIFLNAWLMEIIPLKRQLIFGFALMILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLF 135 (394)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHH
Confidence 467889999999999999999999999999999999999999999999999988864 5667888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHh-cCCChHHHHHHhhHHHHHHHHHhhcCCCCchHHhhccChHHHHHHHHHHHHHcCCCCCC
Q 015075 81 LSAFWTAGTIFEASLAWVVM-TRLNWRWLLAFSSVPSFALLLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPP 159 (413)
Q Consensus 81 ~~~~~~~G~~~~~~l~~~l~-~~~~Wr~~f~~~~i~~~~~~~~~~~~pEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~ 159 (413)
......+|..++|.+.+.+. +..+||+.|.+.+++.++..+..++ .+.|+. ++++
T Consensus 136 ~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~~~~-~~~p~~--~~~~--------------------- 191 (394)
T PRK03699 136 TDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFILTLF-SEFPAL--GKHA--------------------- 191 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHh-cCCccc--cccC---------------------
Confidence 88888899888888877654 4679999999877776554433322 222220 0000
Q ss_pred CccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhccchhhhHHHHHHHHHHHHHHHhhhHHhhhhhccCC
Q 015075 160 GILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSG 239 (413)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 239 (413)
+ + ++++ + .+..+ . +.........+.....++....+.+.+.
T Consensus 192 -----~---~--~~~~---~-------------~~~~~-------~----~~~~~~~~~~~~~~~~~~~~~~~~p~~l-- 232 (394)
T PRK03699 192 -----P---K--ADKP---V-------------AKEKW-------G----IGVLFLAIAALLYILAQLTFISWVPEYA-- 232 (394)
T ss_pred -----c---c--ccCc---c-------------ccccC-------C----hHHHHHHHHHHHHHHHHHHHHHHHHHHH--
Confidence 0 0 0000 0 00000 0 1111122222222223333222222111
Q ss_pred CCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHH
Q 015075 240 DNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGV 319 (413)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (413)
.+.++.+..+.+.. .....++..+|.++.++++||++||+.+.....+..+.+..+...++........+..
T Consensus 233 -----~~~~g~s~~~~~~~---~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (394)
T PRK03699 233 -----QKKFGMSLEDAGNL---VSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTDDPSHLLYAILGL 304 (394)
T ss_pred -----HHHcCCChHHhhHH---HHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHH
Confidence 01122222222221 2233445677899999999999999887766555544333333333332222233333
Q ss_pred HHHhhhhhhhhheecccccccchhhhHHHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHhhcccccc
Q 015075 320 RMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFET 399 (413)
Q Consensus 320 ~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~et 399 (413)
.++..+..+....+..|..|.+ ++...|..+.++++|+.++|.+.+++.+..+....++..+++.+++.+.+.+ .+.+
T Consensus 305 G~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~ 382 (394)
T PRK03699 305 GFFSSAIYTTIITLGSQQTKVA-SPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVMCIL-LGFV 382 (394)
T ss_pred HHHHHHHHHHHHHHHHHHccCC-CHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHHHHH-HHHH
Confidence 3444445555556667777644 6778899999999999999999999988877777777766666666554444 3566
Q ss_pred cCcchhh
Q 015075 400 MGRELKD 406 (413)
Q Consensus 400 ~~~~l~~ 406 (413)
.+|.++.
T Consensus 383 ~~~~~~~ 389 (394)
T PRK03699 383 SKHRQHG 389 (394)
T ss_pred HHHHhcc
Confidence 5555443
No 38
>PRK12382 putative transporter; Provisional
Probab=99.95 E-value=7.2e-25 Score=208.54 Aligned_cols=315 Identities=18% Similarity=0.139 Sum_probs=196.8
Q ss_pred ccccchhhHhhhhcCChHHHHHHHHHHHHHHHHH---hh-----cccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCC
Q 015075 2 LLGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLS---SF-----SPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVS 72 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~---~~-----a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~ 72 (413)
.++++++|+++||+|||+++..+.+.+.++.+.. +. .+|++.+++.|+++|++.+.. +...+++.|+.|++
T Consensus 65 ~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~ 144 (392)
T PRK12382 65 VLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPK 144 (392)
T ss_pred HHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcc
Confidence 3578899999999999999999888777665432 22 357899999999999998865 56667889999999
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHHHHHhhcCCCCchHHhhccChHHHHHHHHHHHHH
Q 015075 73 HRGRWMVALSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFALLLFYGLAPESPRYLCAKARTVDAHRILEKMAFV 152 (413)
Q Consensus 73 ~Rg~~~~~~~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~~~~~~~~pEsp~~l~~~~~~~~a~~~~~~~~~~ 152 (413)
+|+++++..+.+...|..+++++++.+.+..|||+.+.+..+..++........||.++. ++
T Consensus 145 ~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--------------- 206 (392)
T PRK12382 145 HSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVLPLLAWAFNGTVRKVPAH---AG--------------- 206 (392)
T ss_pred ccchhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHhccCCCCC---cc---------------
Confidence 999999999999999999999999988888999998776555443333332233332210 00
Q ss_pred cCCCCCCCccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhccchhhhHHHHHHHHHHHHHHHhhhHHhh
Q 015075 153 NQTKLPPGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLL 232 (413)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (413)
+ +++. + +..+..+.+.. ...+...... ....+...++
T Consensus 207 ------------~----~~~~--------------------~---~~~~~~~~~~~---~~~l~~~~~~-~~~~~~~~~~ 243 (392)
T PRK12382 207 ------------E----RPSL--------------------W---SVVGLIWKPGL---GLALQGVGFA-VIGTFVSLYF 243 (392)
T ss_pred ------------c----CchH--------------------H---HHHHHHHHhHH---HHHHHHHHHh-HHHHHHHHHH
Confidence 0 0000 0 00000000000 0000000000 0111111111
Q ss_pred hhhccCCCCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHHH
Q 015075 233 TSKLSSGDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVT 312 (413)
Q Consensus 233 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (413)
.. .+. +..+ .......++.+++.++.|++.||+|||+.+..+.....+....+...++....
T Consensus 244 ~~-------------~~~--~~~~---~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (392)
T PRK12382 244 AS-------------KGW--AMAG---FTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVA 305 (392)
T ss_pred Hh-------------cCC--chhH---HHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHH
Confidence 10 011 1111 12233445567788899999999999887776655544444333333333222
Q ss_pred HHHHHHHHHHhhhhhhhhheecccccccchhhhHHHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHh
Q 015075 313 TVLLFGVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASS 392 (413)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 392 (413)
.........+.....+.......|.+|++.|+++.|+.+....+++.++|.+.+.+.+..+....+.+.+++.+++.+..
T Consensus 306 ~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 385 (392)
T PRK12382 306 LAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVT 385 (392)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHH
Confidence 22222222222223344556677899999999999999999999999999999998888777777777777777666655
Q ss_pred hcc
Q 015075 393 LLF 395 (413)
Q Consensus 393 ~~~ 395 (413)
++.
T Consensus 386 ~~~ 388 (392)
T PRK12382 386 ILS 388 (392)
T ss_pred Hhh
Confidence 544
No 39
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.94 E-value=3.9e-25 Score=213.22 Aligned_cols=350 Identities=16% Similarity=0.174 Sum_probs=205.7
Q ss_pred ccccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhc----ccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcch
Q 015075 2 LLGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFS----PNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGR 76 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a----~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~ 76 (413)
.+++++.|+++||+|||+++..+.++.+++.++.++. +++..+.+.|++.|++.|.. +....++.|++|+++||+
T Consensus 75 ~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~ 154 (438)
T TIGR00712 75 GFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGT 154 (438)
T ss_pred HHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchh
Confidence 3678999999999999999999999999998887764 46778889999999988864 666778899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-cCCChHHHHHHhhHHHHHH-HHHhhcCCCCchHHhhccChHHHHHHHHHHHHHcC
Q 015075 77 WMVALSAFWTAGTIFEASLAWVVM-TRLNWRWLLAFSSVPSFAL-LLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQ 154 (413)
Q Consensus 77 ~~~~~~~~~~~G~~~~~~l~~~l~-~~~~Wr~~f~~~~i~~~~~-~~~~~~~pEsp~~l~~~~~~~~a~~~~~~~~~~~~ 154 (413)
.+++.+....+|..+++.+..... ...+||+.|++.+++.++. ....+++||+|+....++. +.. +
T Consensus 155 ~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~--~~~---------~- 222 (438)
T TIGR00712 155 IVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMRDTPQSCGLPPI--EEY---------R- 222 (438)
T ss_pred HHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCCCc--hhc---------c-
Confidence 999999999999998887765543 3579999999988877664 4556667888763210000 000 0
Q ss_pred CCCCCCccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhccchhhhHHHHHHHHHHHHHHHhhhHHhhh-
Q 015075 155 TKLPPGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLT- 233 (413)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 233 (413)
++.+. +..++++. + . +.++. ..+..++.+.... .....+.....+++...+.
T Consensus 223 ~~~~~-------~~~~~~~~---------~-----~-~~~~~--~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~p 275 (438)
T TIGR00712 223 NDYPD-------DYNEKAEQ---------E-----L-TAKEI--FMQYVLPNKLLWY---IAIANVFVYLLRYGVLDWSP 275 (438)
T ss_pred ccccc-------cccccccc---------c-----c-chHHH--HHHHHccCchHHH---HHHHHHHHHHHHHHHHHhHH
Confidence 00000 00000000 0 0 00000 0011111111111 1111111111222222222
Q ss_pred hhccCCCCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHH---HHHHHHHHhc--ch
Q 015075 234 SKLSSGDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSA---CIFLLPLVFH--QS 308 (413)
Q Consensus 234 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~---~~~~~~~~~~--~~ 308 (413)
.++.. ..+.+.... .....+..+..+++.++.|+++||+++++....+.... ......+... .+
T Consensus 276 ~~l~~--------~~g~s~~~~---~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (438)
T TIGR00712 276 TYLKE--------VKHFALDKS---SWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGN 344 (438)
T ss_pred HHHHH--------ccCCChhhH---HHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 22110 111111111 12234455667889999999999996432212222111 1111111111 12
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhheecccccccchhhhHHHHHHhhhhhhH-hHHHHHHHHHhhccchhHHHHHHHHHHHH
Q 015075 309 AVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKVGG-MVCPLVAVGLVTSCHLRLAVILFEVVFVL 387 (413)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~-~~~p~~~~~l~~~~~~~~~~~~~~~~~~~ 387 (413)
........+...+...+..........|.+|++.|+++.|+.+.++++++ .++|.+.+.+.+..+....+.+..++.++
T Consensus 345 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~ 424 (438)
T TIGR00712 345 PLVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSIL 424 (438)
T ss_pred hHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHH
Confidence 22211222222222222222223456799999999999999999999876 57899999888887776777777777777
Q ss_pred HHHHhhcccccccC
Q 015075 388 AIASSLLFPFETMG 401 (413)
Q Consensus 388 ~~~~~~~~~~et~~ 401 (413)
+.+..++..||.|+
T Consensus 425 ~~~~~~~~~~~~~~ 438 (438)
T TIGR00712 425 AVILLIVVMIGEKR 438 (438)
T ss_pred HHHHHHHHHhhccC
Confidence 87888888888763
No 40
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.94 E-value=6.9e-25 Score=206.26 Aligned_cols=305 Identities=17% Similarity=0.154 Sum_probs=197.4
Q ss_pred cccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcc-----cHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcch
Q 015075 3 LGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSP-----NYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGR 76 (413)
Q Consensus 3 ~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~-----~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~ 76 (413)
++++++|+++||+|||+++..+.++..++.++.++++ |++.+++.|+++|++.+.. +...+++.|++|+++|++
T Consensus 49 i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (365)
T TIGR00900 49 VLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQ 128 (365)
T ss_pred HHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHH
Confidence 5678899999999999999999999999998888887 9999999999999998865 667789999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHHHHHhhc--CCCCchHHhhccChHHHHHHHHHHHHHcC
Q 015075 77 WMVALSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFALLLFYGL--APESPRYLCAKARTVDAHRILEKMAFVNQ 154 (413)
Q Consensus 77 ~~~~~~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~~~~~~~--~pEsp~~l~~~~~~~~a~~~~~~~~~~~~ 154 (413)
..++.+....+|.++++.+++.+.+..|||+.|++.++..++..+..+. .||+++ +++.
T Consensus 129 ~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~--------------- 189 (365)
T TIGR00900 129 ANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVSVRIPELAA----SEIQ--------------- 189 (365)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcccccCCC----cccc---------------
Confidence 9999999999999999999999988899999998887766554433332 233221 0000
Q ss_pred CCCCCCccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhccchhhhHHHHHHHHHHHHHHHhhhHH-hhh
Q 015075 155 TKLPPGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAV-LLT 233 (413)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 233 (413)
+.+++..++ ..+.++..++++..+........ ....+.... .+.
T Consensus 190 ------------~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 234 (365)
T TIGR00900 190 ------------ALSNAVLRD--------------------TREGIKFVLKNPLLRTLLLLALL---FNLVFAPAIVALF 234 (365)
T ss_pred ------------ccchhHHHH--------------------HHhHHHHHHcCcHHHHHHHHHHH---HHHHHHHHHHHHh
Confidence 000000000 00011222222222221111111 111111110 111
Q ss_pred hhccCCCCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcch-hHHH
Q 015075 234 SKLSSGDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQS-AVVT 312 (413)
Q Consensus 234 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~-~~~~ 312 (413)
+.+.. +.++.+. ...........++.+++.++.+++.||.+||+....+.+...+....+....+ .+..
T Consensus 235 ~~~~~-------~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (365)
T TIGR00900 235 PYVQS-------KYLGRGS---THYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLF 304 (365)
T ss_pred HHHHH-------HHhCCch---HHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHH
Confidence 11100 0011111 11122233455667788899999999999998877665555444443333322 2222
Q ss_pred HHHHHHHHHHhhhhhhhhheecccccccchhhhHHHHHHhhhhhhHhHHHHHHHHHhhc
Q 015075 313 TVLLFGVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTS 371 (413)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~ 371 (413)
....+...++.....+....+..|..|++.|+++.|+.+.+.++++.++|.+.+.+.|.
T Consensus 305 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~ 363 (365)
T TIGR00900 305 LVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADH 363 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23333333444444556778899999999999999999999999999999999888764
No 41
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.94 E-value=2.3e-24 Score=203.80 Aligned_cols=319 Identities=16% Similarity=0.172 Sum_probs=195.9
Q ss_pred cccchhhHhhhhcCChHHHHH-HHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchH--H
Q 015075 3 LGAYSWGIISDNYGRRKSFLG-IAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRW--M 78 (413)
Q Consensus 3 ~G~~~~g~l~Dr~Grr~~~~~-~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~--~ 78 (413)
+.+++.|+++||+|||+.++. +.++..++.++.++++|++.+++.|+++|.+.+.. |...++..|+.|+++|++. .
T Consensus 48 ~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 127 (375)
T TIGR00899 48 AVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAWNRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFS 127 (375)
T ss_pred HHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHH
Confidence 456788999999999887654 55556677788899999999999999998776654 6666788899888887754 5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHHH-HHhhcCCCCchHHhhccChHHHHHHHHHHHHHcCCCC
Q 015075 79 VALSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFALL-LFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKL 157 (413)
Q Consensus 79 ~~~~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~~-~~~~~~pEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~ 157 (413)
+....+.++|.++++++++.+.+..+||+.|++.+++.++.. ..++++||+|+...++
T Consensus 128 ~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------- 186 (375)
T TIGR00899 128 SVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWLFLPSYPRGAPGA--------------------- 186 (375)
T ss_pred HHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhCCCcccCcccc---------------------
Confidence 777788899999999999998888999999999888766553 4445588876421000
Q ss_pred CCCccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhccchhhhHHHHHHHHHHHHHH-HhhhHHhhhhhc
Q 015075 158 PPGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVF-SYYGAVLLTSKL 236 (413)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l 236 (413)
+ +..+.+ . ...+++.+.........+..... ..+...+...
T Consensus 187 -------~---~~~~~~------------------------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 228 (375)
T TIGR00899 187 -------L---TRLEVR------------------------G--LLASRDTRLLFVACTLMWGCNILYIINMPLLIIH-- 228 (375)
T ss_pred -------c---Ccchhh------------------------h--hhcCcchHHHHHHHHHHHHHHHHHHhhhHHHHHH--
Confidence 0 000000 0 00011111111111111111111 1111111111
Q ss_pred cCCCCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHHHHHHH
Q 015075 237 SSGDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLL 316 (413)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (413)
.++.+....+ ..........+++.++.|++.||+|||+.+..+.+........+...++.+......
T Consensus 229 ----------~~g~~~~~~g---~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (375)
T TIGR00899 229 ----------ELGLPDKLAG---LMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQ 295 (375)
T ss_pred ----------HcCCCHHHHH---HHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111111111 112223334566778899999999999987766555444333333333333222222
Q ss_pred HHHHHHhhhhhhhhheecccccccchhhhHHHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHhhc
Q 015075 317 FGVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLL 394 (413)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (413)
....++.....+....+..|..|++ |+++.++.+...++|+.++|.+.+.+.+..+....+.+.+++.+++.+...+
T Consensus 296 ~~~g~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 372 (375)
T TIGR00899 296 LLNAIFIGILAGIGMLYFQDLMPGR-AGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLLL 372 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCcch-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhe
Confidence 2222333333455667788988875 5699999999999999999999998888777666666666666666555443
No 42
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.94 E-value=1.6e-24 Score=207.29 Aligned_cols=329 Identities=16% Similarity=0.170 Sum_probs=208.5
Q ss_pred ccccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccchhHHHHHHHhhccCCCcchHHHHH
Q 015075 2 LLGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGVPVFLAYFLEFVPVSHRGRWMVAL 81 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~~~~~~~~~E~~p~~~Rg~~~~~~ 81 (413)
.++++++|+++||+|||+++..+.++..++.++.+++++++.+++.|++.|++.+..+....++.|+.|+++|++..+..
T Consensus 68 ~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (408)
T PRK09874 68 AIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMGLAQNIWQFLILRALLGLLGGFVPNANALIATQVPRNKSGWALGTL 147 (408)
T ss_pred HHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhHHhHHHHHHHhcCHhhhhHHHHHH
Confidence 35678899999999999999999999999999999999999999999999997655566667888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHHH-HHhhcCCCCchHHhhccChHHHHHHHHHHHHHcCCCCCCC
Q 015075 82 SAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFALL-LFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPG 160 (413)
Q Consensus 82 ~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~~-~~~~~~pEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~ 160 (413)
.....+|..+++.+++.+.+..+||+.|++.++..++.. ...++.||+++.. ++.+
T Consensus 148 ~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-------------------- 204 (408)
T PRK09874 148 STGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLFCIRENFQPV---SKKE-------------------- 204 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhccCcccc---cchh--------------------
Confidence 999999999999999998888999999998877765543 3445566643210 0000
Q ss_pred ccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhccchhhhHHHHHHHHHHHHHHHhhhHHhhhhhccCCC
Q 015075 161 ILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGD 240 (413)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 240 (413)
+.+.++ ..+.+.+++.............. ..... ..+...+...
T Consensus 205 ------~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~-- 248 (408)
T PRK09874 205 ------MLHMRE--------------------------VVTSLKNPKLVLSLFVTTLIIQV-ATGSI-APILTLYVRE-- 248 (408)
T ss_pred ------hhHHHH--------------------------HHHhCcCCchHHHHHHHHHHHHH-HHHHH-HHHHHHHHHH--
Confidence 000000 00001111111111111111000 00000 0111111100
Q ss_pred CccCccccccCCCCChh-HHHHHHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHH
Q 015075 241 NKCGSKVLHADKSKDNS-LYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGV 319 (413)
Q Consensus 241 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (413)
.......... ......+..++.+++....|+++||+|||+.+..+.....+..+.....++.+......+..
T Consensus 249 -------~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (408)
T PRK09874 249 -------LAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGILRFLL 321 (408)
T ss_pred -------HhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 0000000000 01112233445566777889999999999888776665544444333333333222222223
Q ss_pred HHHhhhhhhhhheecccccccchhhhHHHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHhhccc
Q 015075 320 RMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFP 396 (413)
Q Consensus 320 ~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (413)
.++.....+....+..+..|++.|+...++.+.+..+|..++|.+.+.+.+..+....+...+++.+++.+..++..
T Consensus 322 g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~~ 398 (408)
T PRK09874 322 GAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWNSL 398 (408)
T ss_pred HhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHH
Confidence 33333334445556678889999999999999999999999999999888877777777777777777766665543
No 43
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.94 E-value=2.9e-24 Score=200.77 Aligned_cols=300 Identities=24% Similarity=0.360 Sum_probs=217.1
Q ss_pred ccccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHHHH
Q 015075 2 LLGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVA 80 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~ 80 (413)
.++++++|+++||+|||+.+..+.++..++.++..++++++.+++.|++.|++.+.. +...+++.|++|+++|++..++
T Consensus 48 ~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (352)
T cd06174 48 ALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGL 127 (352)
T ss_pred HHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhH
Confidence 367889999999999999999999999999999999999999999999999998875 6777899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHHHHHhhcCCCCchHHhhccChHHHHHHHHHHHHHcCCCCCCC
Q 015075 81 LSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFALLLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPG 160 (413)
Q Consensus 81 ~~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~~~~~~~~pEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~ 160 (413)
......+|..+++.+++.+.+..+||+.+++.+++.++......+.+ |+.
T Consensus 128 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---------------------------- 177 (352)
T cd06174 128 FSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLLLFLL--RLL---------------------------- 177 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH--HHH----------------------------
Confidence 99999999999999999998888999999988887766554443332 100
Q ss_pred ccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhccchhhhHHHHHHHHHH-HHHHHhhhHHhhhhhccCC
Q 015075 161 ILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFF-ANVFSYYGAVLLTSKLSSG 239 (413)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~ 239 (413)
............ .+....+...+....
T Consensus 178 ------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 205 (352)
T cd06174 178 ------------------------------------------------LLLALAFFLLSFGYYGLLTYLPLYLQEV---- 205 (352)
T ss_pred ------------------------------------------------HHHHHHHHHHHhHHHHHHHHHHHHHHHh----
Confidence 000000000000 011111111111110
Q ss_pred CCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhChhH-HHHHHHHHHHHHHHHHHhcchhHHHHHHHHH
Q 015075 240 DNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKL-SMVLMFVSACIFLLPLVFHQSAVVTTVLLFG 318 (413)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (413)
.+. +............+...++.++.+++.||+|||+ .+..+.....+....+...++..........
T Consensus 206 --------~~~---~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 274 (352)
T cd06174 206 --------LGL---SAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLALLLVALLL 274 (352)
T ss_pred --------cCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 011 1111223344556677888999999999999998 7777766665555544443333333333444
Q ss_pred HHHHhhhhhhhhheecccccccchhhhHHHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHhhc
Q 015075 319 VRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLL 394 (413)
Q Consensus 319 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (413)
..++.....+....+..|..|++.|++..|+.+...++++.++|.+.+.+.+..+....+++.+++.+++.+..++
T Consensus 275 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~~~ 350 (352)
T cd06174 275 LGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLLLL 350 (352)
T ss_pred HHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhee
Confidence 4455555667788899999999999999999999999999999999998887777777777777777776665544
No 44
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.94 E-value=1.1e-23 Score=200.07 Aligned_cols=128 Identities=18% Similarity=0.272 Sum_probs=113.3
Q ss_pred cccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHHHHH
Q 015075 3 LGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVAL 81 (413)
Q Consensus 3 ~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~ 81 (413)
+++++.|+++||+|||+++..+.++.+++.+++++++|++.+++.|+++|++.|.. +...+++.|++|+++|+++.++.
T Consensus 70 ~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~ 149 (394)
T PRK10213 70 FASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVI 149 (394)
T ss_pred HHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHH
Confidence 57888999999999999999999999999999999999999999999999998875 67778899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHHHH-HhhcCCCCc
Q 015075 82 SAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFALLL-FYGLAPESP 130 (413)
Q Consensus 82 ~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~~~-~~~~~pEsp 130 (413)
....++|.++++++++.+.+.+|||+.|++.++..++..+ .....||+|
T Consensus 150 ~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~~~p~~~ 199 (394)
T PRK10213 150 FGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSLP 199 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHCCCCC
Confidence 9999999999999999999989999999988776655433 333466654
No 45
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.94 E-value=5.6e-25 Score=207.88 Aligned_cols=323 Identities=16% Similarity=0.220 Sum_probs=194.2
Q ss_pred ccccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHHHH
Q 015075 2 LLGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVA 80 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~ 80 (413)
.+++++.|+++||+|||+++..+.++++++.++.+++++++.+++.|+++|++.|.. +...+++.|++|+++|++..++
T Consensus 44 ~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 123 (379)
T TIGR00881 44 GISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSF 123 (379)
T ss_pred HhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEee
Confidence 467899999999999999999999999999999999999999999999999998864 6777899999999999999999
Q ss_pred HHHHHHHHHHHHH-HHHHHHhcCCChHHHHHHhhHHHHHH-HHHhhcCCCCchHHhhccChHHHHHHHHHHHHHcCCCCC
Q 015075 81 LSAFWTAGTIFEA-SLAWVVMTRLNWRWLLAFSSVPSFAL-LLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLP 158 (413)
Q Consensus 81 ~~~~~~~G~~~~~-~l~~~l~~~~~Wr~~f~~~~i~~~~~-~~~~~~~pEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~ 158 (413)
.+.+..+|..+++ .++..+.+..+||+.|++.++..++. .+..++.||+|+.. +..++ ++.+
T Consensus 124 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-------------~~~~ 187 (379)
T TIGR00881 124 WNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVSLICFLLLRDSPQSC---GLPPA-------------EEMP 187 (379)
T ss_pred hhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHheeeCCCcccc---ccCcc-------------ccCc
Confidence 9999999999999 46666677789999998887766554 45556677776521 00000 0000
Q ss_pred CCccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhccchhhhHHHHHHHHHHHHHHHhhhHHh-hhhhcc
Q 015075 159 PGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVL-LTSKLS 237 (413)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~ 237 (413)
+++.+.++++ +++. .+......+.+++.+.... .....+........... .+..+.
T Consensus 188 ------~~~~~~~~~~----~~~~----------~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 244 (379)
T TIGR00881 188 ------NEEPDGDAEK----KEEE----------LTKKQIFLQYVLLNKVLWY---ISLGYVFVYVVRTGILDWSPLYLT 244 (379)
T ss_pred ------cccccccccc----cccc----------ccchHHHHHHHHhcchHHH---HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000000000 0000 0000011122222221111 11111111111111111 111111
Q ss_pred CCCCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhC-hhHH-HHHHHHHH-HHHHHHHHh--cchhHHH
Q 015075 238 SGDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIG-RKLS-MVLMFVSA-CIFLLPLVF--HQSAVVT 312 (413)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g-rr~~-~~~~~~~~-~~~~~~~~~--~~~~~~~ 312 (413)
+..+.+.. ..........+..+++.++.+++.||.. ||+. ........ ...+..... ..+....
T Consensus 245 --------~~~g~~~~---~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (379)
T TIGR00881 245 --------QEKGFSKE---KASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLNPAANPLMD 313 (379)
T ss_pred --------HHhCCCHH---HHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcCcchhHHHH
Confidence 01111111 1112233455667889999999999863 3332 22211111 111111111 1122222
Q ss_pred HHHHHHHHHHhhhhhhhhheecccccccchhhhHHHHHHhhhhhhHhHHHHHHHHHhhccch
Q 015075 313 TVLLFGVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHL 374 (413)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~ 374 (413)
....+....+..+.....+.+..|.+|++.|+++.|+.+.++++++.++|.+.+.+.+..+.
T Consensus 314 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~ 375 (379)
T TIGR00881 314 LICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFGW 375 (379)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhcc
Confidence 22222333333344455567789999999999999999999999999999999988886654
No 46
>PRK10504 putative transporter; Provisional
Probab=99.94 E-value=1.2e-23 Score=205.14 Aligned_cols=348 Identities=12% Similarity=0.087 Sum_probs=198.3
Q ss_pred ccccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHHHH
Q 015075 2 LLGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVA 80 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~ 80 (413)
.++++++|+++||+|||+++..+.++++++.++++++++++.+++.|+++|++.|.. +...+++.|++|+++|++..++
T Consensus 59 ~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (471)
T PRK10504 59 AVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTF 138 (471)
T ss_pred HHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHH
Confidence 357889999999999999999999999999999999999999999999999998875 6777889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHHH-HHhhcCCCCchHHhhccChHHHHHHHHHHH------HHc
Q 015075 81 LSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFALL-LFYGLAPESPRYLCAKARTVDAHRILEKMA------FVN 153 (413)
Q Consensus 81 ~~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~~-~~~~~~pEsp~~l~~~~~~~~a~~~~~~~~------~~~ 153 (413)
......+|..+++.+++.+.++.|||+.|.+......+.. ......||++. ++.|.|.+........ ..+
T Consensus 139 ~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~---~~~r~~~~~~~~~~~~~~~~~~~~~ 215 (471)
T PRK10504 139 VTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMPNYTM---QTRRFDLSGFLLLAVGMATLTLALD 215 (471)
T ss_pred HHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCccc---cCCCCChHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999998999999998766554443 33344455432 1222222221111000 001
Q ss_pred CCCCCCCccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhccchhhhHHHHHHHHHHHHHHHhhhHHhhh
Q 015075 154 QTKLPPGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLT 233 (413)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (413)
+.+. .+.. ............-...... .++.. .++.....+.+.++++...........+.....++...++.
T Consensus 216 ~~~~-~~~~---~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 288 (471)
T PRK10504 216 GSKG-LGLS---PLAIAGLVAVGVVALLLYL--LHARN-NNRALFSLKLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFL 288 (471)
T ss_pred cCCc-CCcc---hHHHHHHHHHHHHHHHHHH--HHHhc-CCCCccCHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1000 0000 0000000000000000000 00000 00011122222223332221111111111111111111111
Q ss_pred hhccCCCCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHh-c-chh-H
Q 015075 234 SKLSSGDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVF-H-QSA-V 310 (413)
Q Consensus 234 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~-~-~~~-~ 310 (413)
... .+.+. ...........+..+++..+.+++.||+|||+.+..+.+...+....+.. . .+. .
T Consensus 289 ~~~-----------~g~~~---~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (471)
T PRK10504 289 QIG-----------LGFSP---FHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVALLGWYY 354 (471)
T ss_pred HHH-----------cCCCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccccccHH
Confidence 100 01111 11112223334445566678999999999999887766655444333322 1 121 1
Q ss_pred HHHHHHHHHHHHhhhhhhhhheecccccccchhhhHHHHHHhhhhhhHhHHHHHHHHHhhccc
Q 015075 311 VTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCH 373 (413)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~ 373 (413)
......+...++.....+....+..+..|++.|+.+.|+.+...++|..++|.+.+.+++..+
T Consensus 355 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~~g 417 (471)
T PRK10504 355 LLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGLFG 417 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 111122222232333344556777789999999999999999999999999998887766543
No 47
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.93 E-value=2.1e-24 Score=211.20 Aligned_cols=348 Identities=15% Similarity=0.188 Sum_probs=203.0
Q ss_pred ccccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHHHH
Q 015075 2 LLGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVA 80 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~ 80 (413)
.+++++.|+++||+|||+++..+.+++.++.+++++++|++.+++.|+++|++.|.. +...+++.|++|+++|++..++
T Consensus 51 ~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~ 130 (485)
T TIGR00711 51 AISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAI 130 (485)
T ss_pred HHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHH
Confidence 357788999999999999999999999999999999999999999999999998875 6778899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHH-HHHhhcCCCCchHHhhccChHHHHHHHHHH------HHHc
Q 015075 81 LSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFAL-LLFYGLAPESPRYLCAKARTVDAHRILEKM------AFVN 153 (413)
Q Consensus 81 ~~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~-~~~~~~~pEsp~~l~~~~~~~~a~~~~~~~------~~~~ 153 (413)
+.....+|..+++.+++.+.++.+||+.|++.+++.++. .+..+..||+++- ++++.|.....+... ....
T Consensus 131 ~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~~g~~l~~~~~~~~~~~~~ 208 (485)
T TIGR00711 131 WGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPRDKPA--ASENFDFLGLLLLSVGLGSLLYGLS 208 (485)
T ss_pred HHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHHHcCCcccc--ccCCCcHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999888776654 3444556775441 122222211111000 0000
Q ss_pred CCCCCCCccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhccchhhhHHHHHHHHHHHHHHHhhhHHhhh
Q 015075 154 QTKLPPGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLT 233 (413)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (413)
+.+. .+.. .+............ ........+.+.+.+....+.+..++........ +...+.++....+.
T Consensus 209 ~~~~-~~~~-~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 278 (485)
T TIGR00711 209 EGPE-RGWF-DSNEILILSITGLV----AIIAFVVWELTDDNPLVDLRLFKYRNFTIGCVYM----SLLGLGLYGSFYLL 278 (485)
T ss_pred hCCC-CCCC-CchHHHHHHHHHHH----HHHHHHHHHHcCCCCccCHHHHcCCChHHHHHHH----HHHHHHHHHHHHHH
Confidence 0000 0000 00000000000000 0000000000001111122222233332222211 11222222222211
Q ss_pred hhccCCCCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHH--hc-c-hh
Q 015075 234 SKLSSGDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLV--FH-Q-SA 309 (413)
Q Consensus 234 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~--~~-~-~~ 309 (413)
+.+.. +.++.+..+ .........+..+++.++.|++.||+|||+.+..+.....+....+. .. + +.
T Consensus 279 p~~~~-------~~~g~s~~~---~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 348 (485)
T TIGR00711 279 PLYLQ-------QVLGYTALQ---AGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTPDTPF 348 (485)
T ss_pred HHHHH-------HhcCCCHHH---HHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCCCCCH
Confidence 11110 011111111 11223345566778899999999999999987776655544443333 11 1 11
Q ss_pred HHHHHHHHHHHHHhhhhhhhhheecccccccchhhhHHHHHHhhhhhhHhHHHHHHHHHhhc
Q 015075 310 VVTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTS 371 (413)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~ 371 (413)
...........++.....+.......+..|++.|+++.|+.+....+|+.+++.+.+.+.+.
T Consensus 349 ~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 349 LAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILTN 410 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 21222222222222222333444556788999999999999999999999999888877653
No 48
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.93 E-value=1.7e-23 Score=203.78 Aligned_cols=329 Identities=17% Similarity=0.184 Sum_probs=204.1
Q ss_pred cccchhhHhhhhc-----CChHH-HHHHHHHHHHHHHHHhhc---ccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCC
Q 015075 3 LGAYSWGIISDNY-----GRRKS-FLGIAMVTSVAGLLSSFS---PNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVS 72 (413)
Q Consensus 3 ~G~~~~g~l~Dr~-----Grr~~-~~~~~~l~~~~~~~~~~a---~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~ 72 (413)
+++++||+++||+ |||+. +..+.+..+++..+.++. .+++.+.+.|++.|++.+.. +...++..|++|++
T Consensus 60 ~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~ 139 (491)
T PRK11010 60 VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAE 139 (491)
T ss_pred HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChh
Confidence 4678999999999 99986 667777777777777775 46888999999999977664 56678999999999
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHhc-CCChHHHHHHhhHHHHHHHHHhhcCCCCchHHhhccChHHHHHHHHHHHH
Q 015075 73 HRGRWMVALSAFWTAGTIFEASLAWVVMT-RLNWRWLLAFSSVPSFALLLFYGLAPESPRYLCAKARTVDAHRILEKMAF 151 (413)
Q Consensus 73 ~Rg~~~~~~~~~~~~G~~~~~~l~~~l~~-~~~Wr~~f~~~~i~~~~~~~~~~~~pEsp~~l~~~~~~~~a~~~~~~~~~ 151 (413)
+||+..++.+.++.+|.++++.++..+.+ ..|||..|++.++..++..+..++.||+++.. ++ ++
T Consensus 140 ~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~~~~e~~~~~---~~-~~---------- 205 (491)
T PRK11010 140 ERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIATLLAPEPTDTI---PV-PK---------- 205 (491)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHhcCCCcccc---cc-cc----------
Confidence 99999999999999999999999888887 57999999998887766655555678865310 00 00
Q ss_pred HcCCCCCCCccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhccchhhhHHHHHHHHHHHHHHHhhhHHh
Q 015075 152 VNQTKLPPGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVL 231 (413)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (413)
+. ++ . ....++++++++...........+... .+.....
T Consensus 206 --------------~~-~~-~-----------------------~~~~l~~~~~~~~~~~~ll~~~l~~~~--~~~~~~~ 244 (491)
T PRK11010 206 --------------TL-EQ-A-----------------------VVAPLRDFFGRNNAWLILLLIVLYKLG--DAFAMSL 244 (491)
T ss_pred --------------ch-hh-h-----------------------HHHHHHHHHcCcCHHHHHHHHHHHHHH--HHHHHHH
Confidence 00 00 0 000111122222111111111111111 0001111
Q ss_pred hhhhccCCCCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHH---HHhc-c
Q 015075 232 LTSKLSSGDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLP---LVFH-Q 307 (413)
Q Consensus 232 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~---~~~~-~ 307 (413)
..+.+. +..+.+....+ ........++.++|.+++|+++||+|||+.+..+.+...+.... +... +
T Consensus 245 ~~~~l~--------~~~G~s~~~~g--~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~ 314 (491)
T PRK11010 245 TTTFLI--------RGVGFDAGEVG--LVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDK 314 (491)
T ss_pred HHHHHH--------HhcCCCHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 111111 01112111111 11112334567789999999999999887665544432222211 1122 2
Q ss_pred hhHHHHHHHHHHHHHhhhhhhhhheecccccccchhhhHHHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHHHHHHHHH
Q 015075 308 SAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVL 387 (413)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~ 387 (413)
+........+...++.....+..+++..++.|++.+++..|+.++...+++.+++.+.+.+.+..+....+.+..+++++
T Consensus 315 ~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~ 394 (491)
T PRK11010 315 NLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVP 394 (491)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHH
Confidence 22221112222222222233445777889999999999999999999999888888889998887766667777777777
Q ss_pred HHHHhhccc
Q 015075 388 AIASSLLFP 396 (413)
Q Consensus 388 ~~~~~~~~~ 396 (413)
+.+...++.
T Consensus 395 ~l~~~~~~~ 403 (491)
T PRK11010 395 GLLLLLVCR 403 (491)
T ss_pred HHHHHHHHH
Confidence 766666553
No 49
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.93 E-value=1.5e-24 Score=209.65 Aligned_cols=338 Identities=13% Similarity=0.113 Sum_probs=195.2
Q ss_pred cccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHH-HHHHhhhcccch-hHHHHHHHhhccCCCcchHHHH
Q 015075 3 LGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVI-FRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVA 80 (413)
Q Consensus 3 ~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~-~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~ 80 (413)
+++++.|+++||+|||++++.+.++++++.++++++++++.+++ .|+++|++.|.. +....++.|++| ++|++..++
T Consensus 69 ~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~ 147 (455)
T TIGR00892 69 AGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSSNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGL 147 (455)
T ss_pred HhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHH
Confidence 56788999999999999999999999999999999999998875 579999998864 555677889986 789999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHHHHHhhc-CCCCchHHhhccChHHHHHHHHHHHHHcCCCCCC
Q 015075 81 LSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFALLLFYGL-APESPRYLCAKARTVDAHRILEKMAFVNQTKLPP 159 (413)
Q Consensus 81 ~~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~~~~~~~-~pEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~ 159 (413)
.+.+..+|..+++++++.+.+.+|||+.|++.++..++..+..++ .++.+.. ++.+ ++. +++.+.
T Consensus 148 ~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~~~~~~~~~~~~--~~~~-~~~-----------~~~~~~ 213 (455)
T TIGR00892 148 AMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCVCGALMRPVGPSQ--RVSK-SKS-----------KEGLPP 213 (455)
T ss_pred HHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCCCCccc--cccc-ccc-----------cccCCC
Confidence 999999999999999998888899999999988877654333333 3322210 0000 000 000000
Q ss_pred CccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhccchhhhHHHHHHHHHHHHHHHhhhHHh-hhhhccC
Q 015075 160 GILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVL-LTSKLSS 238 (413)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~ 238 (413)
+...++ .+. . . ..++ ......++.+.++++.... ...+...+.++.... +..+..
T Consensus 214 -----~~~~~~-~~~-----~--~-----~~~~-~~~~~~~~~~~~~~~~~~~----~~~~l~~~~~~~~~~~l~~~~~- 269 (455)
T TIGR00892 214 -----DGSTKK-LSK-----K--S-----TAEK-INRFLDFSLFTHRGFLVYL----SGNVIMFLGFFAPIIFLVPYAK- 269 (455)
T ss_pred -----CCcccc-ccc-----c--c-----hhhh-hhhhcchHHhcCchHHHHH----HHHHHHHHHccchHHHHHHHHH-
Confidence 000000 000 0 0 0000 0001111222223222111 111112222222211 111111
Q ss_pred CCCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHh--ChhHHHHH--HHHHHHHHHHHHHhcchhHHHHH
Q 015075 239 GDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKI--GRKLSMVL--MFVSACIFLLPLVFHQSAVVTTV 314 (413)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~--grr~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 314 (413)
. .+.+. ........+.+++.+++.++.+++.||. ++|+.... +.+..++..+......+.+....
T Consensus 270 ~--------~g~s~---~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i 338 (455)
T TIGR00892 270 D--------KGVDE---YEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYTGLVI 338 (455)
T ss_pred H--------cCCCH---HHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHH
Confidence 0 11111 1111223345566677788889999973 33332222 22222222222222233332222
Q ss_pred HHHHHHHHhhhhhhhhheecccccccchhhhHHHHHHhhhhhhHhHHHHHHHHHhhccc-hhHHHHHHHHHHHHHHH
Q 015075 315 LLFGVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCH-LRLAVILFEVVFVLAIA 390 (413)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~-~~~~~~~~~~~~~~~~~ 390 (413)
..+...++.....+..+.+..|.+|++.++++.|+.+....++++++|.+.+.+.+..+ ....+.+.+++.+++.+
T Consensus 339 ~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 339 YCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGL 415 (455)
T ss_pred HHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHH
Confidence 23333333334445567788899999999999999999999999999999988877654 44455555544444433
No 50
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.93 E-value=2.4e-24 Score=201.58 Aligned_cols=301 Identities=24% Similarity=0.395 Sum_probs=190.3
Q ss_pred ccccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHHHH
Q 015075 2 LLGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVA 80 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~ 80 (413)
.+++++.|+++||+|||+++..+.++.+++.++..+++|++.+++.|+++|++.+.. +...+++.|++|+++|++..++
T Consensus 46 ~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 125 (352)
T PF07690_consen 46 ALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGI 125 (352)
T ss_dssp HHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhhhhHHHHhhhccccccccccccccccccccccchhhhhhhcccc
Confidence 357889999999999999999999999999777777788889999999999998765 6778899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHHHH-HhhcCCCCchHHhhccChHHHHHHHHHHHHHcCCCCCC
Q 015075 81 LSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFALLL-FYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPP 159 (413)
Q Consensus 81 ~~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~~~-~~~~~pEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~ 159 (413)
......+|.++++.+++.+.+..+||+.|++.++..++..+ ...+.+|+|+...++.+
T Consensus 126 ~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~--------------------- 184 (352)
T PF07690_consen 126 LSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAILFILFLPEPPPPRERESP--------------------- 184 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHCCC---STTTT--SS---------------------
T ss_pred ccchhhhhhhcccchhhhhhhccccccccccccchhhhhhhhHhhhhhhcccccccccc---------------------
Confidence 99999999999999999988888999999999888877644 33555555431100000
Q ss_pred Cccccchhhhhhhhccccccccccchhhhcchhhccccch-hhhhccchhhhHHHHHHHHHHHHHHHhhhHHhhhhhccC
Q 015075 160 GILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSS-FFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSS 238 (413)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 238 (413)
++.+ ++. ++.+.. ++.+++++... ......+...+.++....+.+.+.
T Consensus 185 ------~~~~-~~~--------------------~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l- 233 (352)
T PF07690_consen 185 ------KESE-SKK--------------------PKPLKPGFKSLFKNPVLW---ILLIAFFLFFFVFSGFSFFLPLYL- 233 (352)
T ss_dssp ------TTTT---H--------------------HHCCCH-CTHHHHHHCCH---HHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred ------cccc-ccc--------------------ccccccccccccccchhh---hhhhhhhHHHHHHHHhhcccchhh-
Confidence 0000 000 000111 22222222221 111111112112222211111110
Q ss_pred CCCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHh---cchhHHHHHH
Q 015075 239 GDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVF---HQSAVVTTVL 315 (413)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 315 (413)
.+.++.+ ..........+..+...++.++.+++.||+++|+..........+....+.. .++.......
T Consensus 234 ------~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (352)
T PF07690_consen 234 ------QEVLGFS--GPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFSSSPVWLIIA 305 (352)
T ss_dssp ------CHHHHCC--THHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHHCHHHHHHHH
T ss_pred ------hhccCCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 1112222 0011122234455566677889999999999876665544444333333222 2222222333
Q ss_pred HHHHHHHhhhhhhhhheecccccccchhhhHHHHHHhhhhhhHhHHH
Q 015075 316 LFGVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCP 362 (413)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~~~p 362 (413)
.+...++.....+....+..|..|++.|+++.|+.+.+.++++.++|
T Consensus 306 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 306 LFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 33334444445667888999999999999999999999999999887
No 51
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.93 E-value=1.1e-24 Score=207.29 Aligned_cols=341 Identities=17% Similarity=0.318 Sum_probs=216.2
Q ss_pred ccccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhccc--HHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHH
Q 015075 2 LLGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPN--YVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWM 78 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~--~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~ 78 (413)
+++++..|+++||+|-|+++..+.++++++++++..+.+ ++.+++.|++||++.|.. |....+.+.|.|++||++..
T Consensus 87 i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~~pa~~~i~~~W~P~~Ers~~~ 166 (466)
T KOG2532|consen 87 ILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVLFPAIGSILAKWAPPNERSTFI 166 (466)
T ss_pred HHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHHHhhhhceeeeECCHHHHHHHH
Confidence 467888899999999999999999999999999987765 457899999999999975 78888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcC-CChHHHHHHhhHHHHHHHHHh-hcCCCCchHHhhccChHHHHHHHHHHHHHcCCC
Q 015075 79 VALSAFWTAGTIFEASLAWVVMTR-LNWRWLLAFSSVPSFALLLFY-GLAPESPRYLCAKARTVDAHRILEKMAFVNQTK 156 (413)
Q Consensus 79 ~~~~~~~~~G~~~~~~l~~~l~~~-~~Wr~~f~~~~i~~~~~~~~~-~~~pEsp~~l~~~~~~~~a~~~~~~~~~~~~~~ 156 (413)
++...+.++|.+++-++++.+.+. +||+++|++.++.++++.+++ ++.-|+|+- +.+..+. +++++.+
T Consensus 167 ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~---h~~is~~--El~~I~~----- 236 (466)
T KOG2532|consen 167 AILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSK---HPNISEK--ELKYIEK----- 236 (466)
T ss_pred HHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCccc---CCCCCHH--HHHHHHh-----
Confidence 999999999999999999999887 999999999999998875554 555677752 1110000 0011100
Q ss_pred CCCCccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhccchhhhHHHHHHHHHHHHHHHhhhHHhhhhhc
Q 015075 157 LPPGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKL 236 (413)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 236 (413)
.+ .++ +..+.....++.+++.+. .|..++......++..++..++
T Consensus 237 ----------------~k--~~~-----------~~~~~~~vP~~~i~ts~~------vwai~~~~f~~~~~~~~l~~y~ 281 (466)
T KOG2532|consen 237 ----------------GK--SEA-----------HVKKKPPVPYKAILTSPP------VWAIWISAFGGNWGFYLLLTYL 281 (466)
T ss_pred ----------------cc--ccc-----------ccCCCCCCCHHHHHcCHH------HHHHHHHHHHHHHHHHHHHHHh
Confidence 00 000 000001123444444332 3333333333333333333333
Q ss_pred cCCCCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhCh---------hHHHHHHHHHHHHHHHHHHhcc
Q 015075 237 SSGDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGR---------KLSMVLMFVSACIFLLPLVFHQ 307 (413)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~gr---------r~~~~~~~~~~~~~~~~~~~~~ 307 (413)
++ +..++++++..+.+.. ..+..+...+..+++|.++||+-+ |..-.+++.+..++++.+.+..
T Consensus 282 Pt----Y~~~VL~f~v~~~G~~---salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~ 354 (466)
T KOG2532|consen 282 PT----YLKEVLGFDVRETGFL---SALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTS 354 (466)
T ss_pred hH----HHHHHhCCChhhhhHH---HHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecC
Confidence 32 2234556666555532 335555667788999999999854 2233345555555555544422
Q ss_pred --hhHHHHHHHHHHHHHhhhhhhhhheecccccccchhhhHHHHHHhhhhhhHhHHHHHHHHHhhcc---chhHHHHHHH
Q 015075 308 --SAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSC---HLRLAVILFE 382 (413)
Q Consensus 308 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~---~~~~~~~~~~ 382 (413)
+....+. ++....+..|........+.-...++..+...|+.+.++.+.++++|.+.+.+.... .+...|++.+
T Consensus 355 ~~~~~~a~~-~l~~~~~~~g~~~~Gf~~~~~~~apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a 433 (466)
T KOG2532|consen 355 DEHRLLAVI-LLTIAIGLSGFNISGFYKNHQDIAPQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAA 433 (466)
T ss_pred CCcchHHHH-HHHHHHHHcccchhhhHhhhhhccchHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHH
Confidence 2222222 222223333332222222222326788999999999999999999999998777321 2234455555
Q ss_pred HHHHHHHHHhhcc
Q 015075 383 VVFVLAIASSLLF 395 (413)
Q Consensus 383 ~~~~~~~~~~~~~ 395 (413)
++.+++.+...++
T Consensus 434 ~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 434 GILIVGNIIFLFF 446 (466)
T ss_pred HHHHHhchheeEe
Confidence 5555554444333
No 52
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.93 E-value=2.4e-23 Score=197.24 Aligned_cols=129 Identities=16% Similarity=0.245 Sum_probs=113.6
Q ss_pred ccccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHHHH
Q 015075 2 LLGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVA 80 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~ 80 (413)
.++++++|+++||+|||+++..+.++++++.+++++++|++.+++.|+++|++.|.. +....++.|++|+++|++.++.
T Consensus 52 ~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (382)
T PRK10091 52 VVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAG 131 (382)
T ss_pred HHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHH
Confidence 468899999999999999999999999999999999999999999999999998875 5556778999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHH-HHHhhcCCCCc
Q 015075 81 LSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFAL-LLFYGLAPESP 130 (413)
Q Consensus 81 ~~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~-~~~~~~~pEsp 130 (413)
+..+..+|..+++++++.+.+..+||+.|++.++..++. ...+..+||.+
T Consensus 132 ~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~lp~~~ 182 (382)
T PRK10091 132 MVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIYFWVPDIR 182 (382)
T ss_pred HHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 999999999999999998888899999999988776554 33455677754
No 53
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.93 E-value=2.9e-23 Score=203.02 Aligned_cols=344 Identities=13% Similarity=0.113 Sum_probs=196.6
Q ss_pred cccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccch-hHHHHHHHhhc-cCCCcchHHHH
Q 015075 3 LGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFV-PVSHRGRWMVA 80 (413)
Q Consensus 3 ~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~-p~~~Rg~~~~~ 80 (413)
.+++++|+++||+|||+++..+.+++.++++++++++|++.++++|+++|+|.|.. +.....+.+++ |+++|++..++
T Consensus 56 ~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~ 135 (495)
T PRK14995 56 GMVLPMGALGDRIGFKRLLMLGGTLFGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGV 135 (495)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 45678999999999999999999999999999999999999999999999998765 55556666665 77899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHH-HHHhhcCCCCchHHhhccChHHHHHHHHH------HHHHc
Q 015075 81 LSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFAL-LLFYGLAPESPRYLCAKARTVDAHRILEK------MAFVN 153 (413)
Q Consensus 81 ~~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~-~~~~~~~pEsp~~l~~~~~~~~a~~~~~~------~~~~~ 153 (413)
+.....+|..++|.+++.+.++.+|||.|++.....++. .+..+.+||+|+.. +++.|.....+.. .....
T Consensus 136 ~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~--~~~~d~~g~~~~~~~~~~l~~~~~ 213 (495)
T PRK14995 136 WAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQAGRR--DQPLNLGHALMLIVAILLLVYSAK 213 (495)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCC--CCCCChHhHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999877665544 44556678876421 1111111111000 00000
Q ss_pred CCCCCCCccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhccchhhhHHHHHHHHHHHHHHHhhhHHhh-
Q 015075 154 QTKLPPGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLL- 232 (413)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 232 (413)
+.. .+... ............. ........+.+.+.+...++.+..+... .... ..+.....+++...+
T Consensus 214 ~~~--~~~~~-~~~~~~~~~~~~~----~l~~f~~~e~~~~~p~~~~~lf~~~~~~-~~~~---~~~~~~~~~~~~~~~~ 282 (495)
T PRK14995 214 TAL--KGFLS-LWVTSLTLLTGAL----LLGLFIRTQLAASRPMIDMRLFTHRIIL-SGVV---MAMTAMITLVGFELLM 282 (495)
T ss_pred hcc--ccCCc-hHHHHHHHHHHHH----HHHHHHHHHhcCCCCCcCHHHhCCcccH-HHHH---HHHHHHHHHHHHHHHH
Confidence 000 00000 0000000000000 0000000000011111222222222222 1111 111122222222111
Q ss_pred hhhccCCCCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHh--c-chh
Q 015075 233 TSKLSSGDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVF--H-QSA 309 (413)
Q Consensus 233 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~--~-~~~ 309 (413)
+.++. ..++.+....+ .......+...++.++.|++.||+|||+.+..+.+...+....+.. . .+.
T Consensus 283 ~~~lq--------~v~g~s~~~ag---~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~~~~ 351 (495)
T PRK14995 283 AQELQ--------FVHGLSPLEAG---MFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTDFSTQQ 351 (495)
T ss_pred HHHHH--------HHcCCCHHHHH---HHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcCCCch
Confidence 11111 01112111112 2223344556778899999999999998877666555433322221 1 122
Q ss_pred HHHHHHHHHHHHHhhhhhhhhheecccccccchhhhHHHHHHhhhhhhHhHHHHHHHHHhh
Q 015075 310 VVTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVT 370 (413)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~ 370 (413)
.......+..++......+.......+..|++.++.+.++.+...++|+.+++.+.+.+.+
T Consensus 352 ~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 352 WQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222222232333333334455566788999999999999999999999999888776654
No 54
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.93 E-value=5.4e-23 Score=195.65 Aligned_cols=128 Identities=20% Similarity=0.238 Sum_probs=112.3
Q ss_pred cccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHHHHH
Q 015075 3 LGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVAL 81 (413)
Q Consensus 3 ~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~ 81 (413)
+++++.|+++||+|||+.+..+.+++.++.++..++++++.+++.|+++|++.+.. +...+++.|++|+++|++..+..
T Consensus 53 ~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~ 132 (392)
T PRK10473 53 AAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLL 132 (392)
T ss_pred HHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence 56788999999999999999999999999999999999999999999999998864 56778899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHH-HHHhhcCCCCc
Q 015075 82 SAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFAL-LLFYGLAPESP 130 (413)
Q Consensus 82 ~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~-~~~~~~~pEsp 130 (413)
+....+|..+++.+++.+.+..+||+.|++.++..++. .+..+.+||++
T Consensus 133 ~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~ 182 (392)
T PRK10473 133 NGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLFILKETR 182 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 99999999999999888878889999999887766554 33455667764
No 55
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.92 E-value=1.7e-22 Score=193.07 Aligned_cols=128 Identities=16% Similarity=0.215 Sum_probs=111.0
Q ss_pred cccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHHHHH
Q 015075 3 LGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVAL 81 (413)
Q Consensus 3 ~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~ 81 (413)
+++++.|+++||+|||+++..+.+++.++.++.+++++++.+++.|+++|++.+.. +...+++.|++|+++|++..++.
T Consensus 63 ~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 142 (406)
T PRK15402 63 FLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALM 142 (406)
T ss_pred HHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHH
Confidence 56788999999999999999999999999999999999999999999999988764 66678889999999999999988
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHHHH-HhhcCCCCc
Q 015075 82 SAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFALLL-FYGLAPESP 130 (413)
Q Consensus 82 ~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~~~-~~~~~pEsp 130 (413)
.....+|..++|.+++.+.+..+||+.|++.++..++... .++..||++
T Consensus 143 ~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (406)
T PRK15402 143 ANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWRAMPETA 192 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 8888889999999998888888999999988777665433 445567765
No 56
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.92 E-value=1.8e-22 Score=192.60 Aligned_cols=326 Identities=14% Similarity=0.134 Sum_probs=190.9
Q ss_pred ccccchhhHhhhhcCChHHHHHHHHHHHHHHHHH---hh-cccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcch
Q 015075 2 LLGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLS---SF-SPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGR 76 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~---~~-a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~ 76 (413)
.++++++|++.||+|||+++..+.++++++.+++ ++ .++++.+++.|+++|++.+.. +....++.|++|+++||+
T Consensus 62 ~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~ 141 (402)
T TIGR00897 62 AISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSS 141 (402)
T ss_pred HHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHH
Confidence 3678899999999999999999999998887654 23 358889999999999988764 455677889999999999
Q ss_pred HHHHHHHHHHHHH-HHHHHHHHHHhcCCChHHHHHHhhHHHHHH-HHHhhcCCCCchHHhhccChHHHHHHHHHHHHHcC
Q 015075 77 WMVALSAFWTAGT-IFEASLAWVVMTRLNWRWLLAFSSVPSFAL-LLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQ 154 (413)
Q Consensus 77 ~~~~~~~~~~~G~-~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~-~~~~~~~pEsp~~l~~~~~~~~a~~~~~~~~~~~~ 154 (413)
++++.+.+.++|. ++++++++.+.+..||+..++.......+. .+..+..+|.++ +++.++
T Consensus 142 ~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~------------- 204 (402)
T TIGR00897 142 AVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAFVLTGGVIALFSNKDIFT----PQHMQT------------- 204 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHhccCCCCC----cccccC-------------
Confidence 9999999999997 578888888877788665555433222222 222233333221 000000
Q ss_pred CCCCCCccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhccchhhhHHHHHHHHHHHHHHHhhhHHhhhh
Q 015075 155 TKLPPGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTS 234 (413)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (413)
++ +.++. ...++.+++.|... ......+.+...+++...+.+
T Consensus 205 ----------~~--~~~~~-----------------------~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~p 246 (402)
T TIGR00897 205 ----------RE--KFSEL-----------------------GKAATILFTNPNVL---LGGMVRIINTIGLFGFAVFLP 246 (402)
T ss_pred ----------Cc--chhhH-----------------------HHHHHHHHcChhHH---HHHHHHHHHHHHHHHHHHHHH
Confidence 00 00000 00011122211111 111122222223333222222
Q ss_pred hccCCCCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhChhHHHH-HHHHHHHHHHHHHH-----hcch
Q 015075 235 KLSSGDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMV-LMFVSACIFLLPLV-----FHQS 308 (413)
Q Consensus 235 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~-~~~~~~~~~~~~~~-----~~~~ 308 (413)
.+.. .++.+..+.+ .......+..+++.++.|+++||+|||+... .+.+...+....+. ..++
T Consensus 247 ~~~~--------~~g~s~~~~~---~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~ 315 (402)
T TIGR00897 247 MFVA--------ELGFSTSEWL---QIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGHS 315 (402)
T ss_pred HHHH--------HcCCChhHHH---HHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCCc
Confidence 1111 0112111111 1223445667889999999999999887653 22222222111111 1122
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhheecccccccchhhhHHHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHHHHHHHHHH
Q 015075 309 AVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLA 388 (413)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~ 388 (413)
........+....+..+..+ ......|..| +.|+++.|+.|...++++.++|.+.+.+.+..+....+++.+++.+++
T Consensus 316 ~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~ 393 (402)
T TIGR00897 316 FAVALIIAIALGIFLAGYVP-LAAVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVS 393 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHH
Confidence 22222222222222222222 2344567655 579999999999999999999999999988887777778887777777
Q ss_pred HHHhhcc
Q 015075 389 IASSLLF 395 (413)
Q Consensus 389 ~~~~~~~ 395 (413)
.+...|+
T Consensus 394 ~~~~~~~ 400 (402)
T TIGR00897 394 AFLTAFI 400 (402)
T ss_pred HHHHHHh
Confidence 6665554
No 57
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.92 E-value=2.6e-22 Score=190.42 Aligned_cols=129 Identities=23% Similarity=0.354 Sum_probs=113.9
Q ss_pred ccccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHHHH
Q 015075 2 LLGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVA 80 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~ 80 (413)
.++++++|+++||+|||+++..+.++..++.++.+++++++.+++.|+++|++.+.. +...+++.|++|+++|++..+.
T Consensus 54 ~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (385)
T TIGR00710 54 AAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSI 133 (385)
T ss_pred HHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 367889999999999999999999999999999999999999999999999998875 6677899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHH-HHHhhcCCCCc
Q 015075 81 LSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFAL-LLFYGLAPESP 130 (413)
Q Consensus 81 ~~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~-~~~~~~~pEsp 130 (413)
.+....+|..+++.+++.+.+..+||+.|++.++..++. ....+..||++
T Consensus 134 ~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (385)
T TIGR00710 134 LMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFILPETL 184 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 999999999999999998888899999998877766554 33445567764
No 58
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.92 E-value=1.1e-22 Score=192.34 Aligned_cols=317 Identities=13% Similarity=0.143 Sum_probs=190.7
Q ss_pred cccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhc-----ccHHHHHHHHHHhhhcccchhHHHHHHHhhccCCCcchH
Q 015075 3 LGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFS-----PNYVSLVIFRCFVGVGLGGVPVFLAYFLEFVPVSHRGRW 77 (413)
Q Consensus 3 ~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a-----~~~~~l~~~R~l~G~~~g~~~~~~~~~~E~~p~~~Rg~~ 77 (413)
++.++.|++.||+|+|+++..+.+++++.++.++++ ++++.+++.|++.|++.+..+.....+++|+|+++||++
T Consensus 85 l~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gigg~~f~~~~~~vs~wfp~~~rG~A 164 (462)
T PRK15034 85 LLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFAGANFASSMGNISFFFPKAKQGSA 164 (462)
T ss_pred HHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHCCHhHhHHH
Confidence 345678999999999999999999999999999987 899999999999999833357778899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHh-----c-------------CCChHHHHHHhhHHHHHHHHH-hhcCCCCchHHhhccC
Q 015075 78 MVALSAFWTAGTIFEASLAWVVM-----T-------------RLNWRWLLAFSSVPSFALLLF-YGLAPESPRYLCAKAR 138 (413)
Q Consensus 78 ~~~~~~~~~~G~~~~~~l~~~l~-----~-------------~~~Wr~~f~~~~i~~~~~~~~-~~~~pEsp~~l~~~~~ 138 (413)
.++.....++|..+++++...+. . ..+||...++-.++.++..+. ++.++|.|+ ++.+
T Consensus 165 ~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~---~~~~ 241 (462)
T PRK15034 165 LGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIAS---SRAS 241 (462)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCccc---cccC
Confidence 99997666667665554443321 2 234788777666666554433 333443221 0000
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhccchhhhHHHHHHHH
Q 015075 139 TVDAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVL 218 (413)
Q Consensus 139 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (413)
. ++ ....+..++.+ .+...
T Consensus 242 ~-------------------------------~~--------------------------~~~vlk~~~~W----llsll 260 (462)
T PRK15034 242 I-------------------------------AD--------------------------QLPVLQRLHLW----LLSLL 260 (462)
T ss_pred H-------------------------------HH--------------------------HHHHhCCCchh----HHHHH
Confidence 0 00 00001111111 11122
Q ss_pred HHHHHHHhhhHHhhhhhccCCCCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHH
Q 015075 219 FFANVFSYYGAVLLTSKLSSGDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACI 298 (413)
Q Consensus 219 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~ 298 (413)
+++....|.+.....+.+... .+ . ........++..+...+...++|+++||+|+|+++..+++...+
T Consensus 261 y~~tFG~fvg~s~~lp~~~~~-------~~--~---~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i 328 (462)
T PRK15034 261 YLATFGSFIGFSAGFAMLAKT-------QF--P---DVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAI 328 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-------Hc--C---hHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHH
Confidence 222222222222111111100 00 0 01111223344555666778999999999999988877665544
Q ss_pred HHHHH--Hhcc----hhHHHHHHHHHHHHHhhhhhhhhheeccccccc---------------------chhhhHHHHHH
Q 015075 299 FLLPL--VFHQ----SAVVTTVLLFGVRMCVTGTITVATIYAPEIYPT---------------------SARTTGFGVAS 351 (413)
Q Consensus 299 ~~~~~--~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~---------------------~~r~~~~g~~~ 351 (413)
..... .... +.......++...++.....+..+.++++++|+ +..+...|+..
T Consensus 329 ~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~ 408 (462)
T PRK15034 329 FSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFIS 408 (462)
T ss_pred HHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHH
Confidence 43221 1221 112222222222222222344567788888885 25778899999
Q ss_pred hhhhhhHhHHHHHHHHHhhccch-hHHHHHHHHHHHHHHHHhhcc
Q 015075 352 SLGKVGGMVCPLVAVGLVTSCHL-RLAVILFEVVFVLAIASSLLF 395 (413)
Q Consensus 352 ~~~~~~~~~~p~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 395 (413)
.+|.+|+++-|.+.+...+.++. ...++.+.+..+++.++.+..
T Consensus 409 a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~ 453 (462)
T PRK15034 409 AIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLV 453 (462)
T ss_pred HHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999888877776654 455677777777666665543
No 59
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.92 E-value=1.3e-22 Score=192.58 Aligned_cols=325 Identities=12% Similarity=0.062 Sum_probs=193.9
Q ss_pred cccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHHHHH
Q 015075 3 LGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVAL 81 (413)
Q Consensus 3 ~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~ 81 (413)
+.+++.|+++||+|||+++..+.+++.+++++++++++. ++.|+++|++.|.. |...+++.|++|+++|++++++.
T Consensus 53 l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~ 129 (393)
T PRK11195 53 VLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGIHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWM 129 (393)
T ss_pred HHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence 567889999999999999999999999998888777664 78999999998875 77889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHHHHHhhcCCCCchHHhhccChHHHHHHHHHHHHHcCCCCCCCc
Q 015075 82 SAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFALLLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGI 161 (413)
Q Consensus 82 ~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~~~~~~~~pEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~ 161 (413)
+.....|.++||.+++.+.+. .|+..+.+.+...++..+..+.+||+|+.. +++.++..+..++.
T Consensus 130 ~~~~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~------------ 194 (393)
T PRK11195 130 EGSTIAAILLGTVLGGALADP-HAEAALAVCALIYLLAALFNLFIPRLGARR--PGQSWNPIALLRDF------------ 194 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCCCcccc--cccCCCHHHHHHHH------------
Confidence 999999999999999998764 488777766555444455556788876421 00000000000000
Q ss_pred cccchhhhhhhhccccccccccchhhhcchhhccccchhhhhccchhhhHHHH-HHHHHHHHHHHhhhHHhhhhhccCCC
Q 015075 162 LVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLL-LWVLFFANVFSYYGAVLLTSKLSSGD 240 (413)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~ 240 (413)
.+.++.+++.+..+.... ....+.......+....+.+..
T Consensus 195 -----------------------------------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 235 (393)
T PRK11195 195 -----------------------------------FHACRVLWRDKLGRFSLAGTTLFWGAGATLRFLVLAWAPVA---- 235 (393)
T ss_pred -----------------------------------HHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH----
Confidence 000111222222221111 1111111111111111111111
Q ss_pred CccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHH
Q 015075 241 NKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVR 320 (413)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (413)
++.+... .........++.++|.++.+++.||.++|+.+..+.... .....+....+.+......+..+
T Consensus 236 -------lg~s~~~---~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~G 304 (393)
T PRK11195 236 -------LGITLNQ---PAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGILMG-LVVLLMALQHSLLPAYPLLILIG 304 (393)
T ss_pred -------cCCChhH---HHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHHHH-HHHHHHHHHhHHHHHHHHHHHHH
Confidence 1121221 112234455667778888899999888887666654333 22222222223222222222222
Q ss_pred HHhhhhhhhhheecccccccch-hhhHHHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHhhccc
Q 015075 321 MCVTGTITVATIYAPEIYPTSA-RTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFP 396 (413)
Q Consensus 321 ~~~~~~~~~~~~~~~e~~p~~~-r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (413)
++.....+...+...|..|++. ++.+.++.+...+++..++..+.+. .+..+....+.+.++..++++...+.+.
T Consensus 305 ~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (393)
T PRK11195 305 ALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSL-LVKLGVPVVAVIVGFGLLVALAMALLWR 380 (393)
T ss_pred HhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHH-HHHcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 2222222334455567666654 7999999999999998888877663 4555655555555555555655555443
No 60
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.92 E-value=2e-22 Score=190.79 Aligned_cols=129 Identities=17% Similarity=0.341 Sum_probs=114.1
Q ss_pred ccccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHHHH
Q 015075 2 LLGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVA 80 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~ 80 (413)
.++++++|+++||+|||+++..+.++.+++.+++.++++++.+++.|+++|++.+.. +...+++.|++|+++|++.+++
T Consensus 40 ~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (377)
T PRK11102 40 AIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSF 119 (377)
T ss_pred HHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 367889999999999999999999999999999999999999999999999988765 5667889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHH-HHHhhcCCCCc
Q 015075 81 LSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFAL-LLFYGLAPESP 130 (413)
Q Consensus 81 ~~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~-~~~~~~~pEsp 130 (413)
.+....+|..+++.+++.+.+..+||+.|++.++..++. .+..+++||++
T Consensus 120 ~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (377)
T PRK11102 120 VTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVFFFIPETL 170 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHhCCccC
Confidence 999999999999999999888889999999887776654 44456677764
No 61
>PRK11043 putative transporter; Provisional
Probab=99.92 E-value=4e-22 Score=190.24 Aligned_cols=129 Identities=19% Similarity=0.301 Sum_probs=112.0
Q ss_pred ccccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHHHH
Q 015075 2 LLGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVA 80 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~ 80 (413)
.++++++|+++||+|||+.+..+..+..++.++++++++++.+++.|+++|++.+.. +...+++.|++|+++|++..+.
T Consensus 55 ~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (401)
T PRK11043 55 ALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFAT 134 (401)
T ss_pred HHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 468899999999999999999999999999999999999999999999999988764 4556788999999999999888
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHHHHHhhcCCCCc
Q 015075 81 LSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFALLLFYGLAPESP 130 (413)
Q Consensus 81 ~~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~~~~~~~~pEsp 130 (413)
......+|..+++.+++.+.+..|||+.|++.++..++..+..++.+|++
T Consensus 135 ~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (401)
T PRK11043 135 IMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLRLKPSK 184 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 88888899999999999988889999999988877766655555556544
No 62
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.92 E-value=5.3e-22 Score=188.73 Aligned_cols=321 Identities=14% Similarity=0.174 Sum_probs=184.0
Q ss_pred ccchhhHhhhhcCChHHH-HHHHHHHHHHHHHHhhcccHHHHHHHHH-HhhhcccchhHHHHHHHhhccCCCc--chHHH
Q 015075 4 GAYSWGIISDNYGRRKSF-LGIAMVTSVAGLLSSFSPNYVSLVIFRC-FVGVGLGGVPVFLAYFLEFVPVSHR--GRWMV 79 (413)
Q Consensus 4 G~~~~g~l~Dr~Grr~~~-~~~~~l~~~~~~~~~~a~~~~~l~~~R~-l~G~~~g~~~~~~~~~~E~~p~~~R--g~~~~ 79 (413)
+.+..++ +||+|||+.+ ..+.++.+++..+.+++++++.+++.+. +.|.+....+....+..|+.|+++| +...+
T Consensus 68 ~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (393)
T PRK15011 68 SQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLFAWNRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSS 146 (393)
T ss_pred HHHHHHH-HhcccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHH
Confidence 4444555 9999999875 4556666778888889999998766554 4455443346666777888877766 44557
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHH-HHHhhcCCCCchHHhhccChHHHHHHHHHHHHHcCCCCC
Q 015075 80 ALSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFAL-LLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLP 158 (413)
Q Consensus 80 ~~~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~-~~~~~~~pEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~ 158 (413)
..+.+.++|.++++++++.+.++.|||..|+..++..++. .....+.||+|+- +.+
T Consensus 147 ~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~---~~~-------------------- 203 (393)
T PRK15011 147 FLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLFLPSMRKE---LPL-------------------- 203 (393)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhcCccCCC---Ccc--------------------
Confidence 8888999999999999999988899999999888766554 4445567876530 000
Q ss_pred CCccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhccchhhhHHHHHHHHHHHHHHHhhhHHhhhhhccC
Q 015075 159 PGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSS 238 (413)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 238 (413)
+ +.+.+.. ++. .++...........+... ..+. ...+.++.
T Consensus 204 ------~-~~~~~~~--------------------~~~--------~~~~~~~~~~~~~~~~~~-~~~~--~~~p~~l~- 244 (393)
T PRK15011 204 ------A-TGTLEAP--------------------RRN--------RRDTLLLFVICTLMWGTN-SLYI--INMPLFII- 244 (393)
T ss_pred ------c-ccccccc--------------------ccc--------cccHHHHHHHHHHHHHHH-HHHH--HHHHHHHH-
Confidence 0 0000000 000 000011101111111110 0000 11111111
Q ss_pred CCCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHH
Q 015075 239 GDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFG 318 (413)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (413)
+.++.+....+ ..........+++.++.|+++||+|||+.+..+.+........+...++........+.
T Consensus 245 -------~~~~~~~~~~g---~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l 314 (393)
T PRK15011 245 -------NELHLPEKLAG---VMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLL 314 (393)
T ss_pred -------HHcCCCHHHHH---HHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 01111111111 11223334556788999999999999987766554443333222222222222222222
Q ss_pred HHHHhhhhhhhhheecccccccchhhhHHHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHhhccccc
Q 015075 319 VRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFE 398 (413)
Q Consensus 319 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 398 (413)
...+.....+....+..|.+|++ |+++.++.+...++|+.++|.+.+.+.+..+....+.+..++.+++.+..++ .||
T Consensus 315 ~~~~~g~~~~~~~~~~~~~~p~~-~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~ 392 (393)
T PRK15011 315 NAIYIGILGGIGMLYFQDLMPGQ-AGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLR-IKD 392 (393)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHh-hcC
Confidence 21221122233445678999865 9999999999999999999999998888666555555555666665555554 355
Q ss_pred c
Q 015075 399 T 399 (413)
Q Consensus 399 t 399 (413)
|
T Consensus 393 ~ 393 (393)
T PRK15011 393 V 393 (393)
T ss_pred C
Confidence 4
No 63
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.91 E-value=2.4e-21 Score=185.18 Aligned_cols=130 Identities=18% Similarity=0.246 Sum_probs=114.4
Q ss_pred ccccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHHHH
Q 015075 2 LLGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVA 80 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~ 80 (413)
.+|++++|+++||+|||+++..+.++++++++++++++|++.++++|+++|++.+.. +....++.|++|+++|++.+++
T Consensus 65 ~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (413)
T PRK15403 65 MALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAI 144 (413)
T ss_pred HHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 357889999999999999999999999999999999999999999999999988754 4456778899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHHHH-HhhcCCCCch
Q 015075 81 LSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFALLL-FYGLAPESPR 131 (413)
Q Consensus 81 ~~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~~~-~~~~~pEsp~ 131 (413)
......+|..+++++++.+.+..|||+.|++.++..++..+ ..+.+||+++
T Consensus 145 ~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp~~~~ 196 (413)
T PRK15403 145 ITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPETVK 196 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCCcc
Confidence 99999999999999999888888999999998887766544 3556788753
No 64
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.91 E-value=2.2e-21 Score=183.82 Aligned_cols=307 Identities=17% Similarity=0.142 Sum_probs=184.7
Q ss_pred ccccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHHHH
Q 015075 2 LLGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVA 80 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~ 80 (413)
.++++++|+++||+|||+++..+.++.+++..+.++++|++.+++.|+++|++.|.. +...+.+.+..|+++|++.++.
T Consensus 55 ~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (381)
T PRK03633 55 LVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAA 134 (381)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 467889999999999999999999999999999999999999999999999998865 5556677788999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHH-HHHHHhhcCCCCchHHhhccChHHHHHHHHHHHHHcCCCCCC
Q 015075 81 LSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSF-ALLLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPP 159 (413)
Q Consensus 81 ~~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~-~~~~~~~~~pEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~ 159 (413)
+..+..+|..+++.++..+.+...|+.. +....... +........+|+++
T Consensus 135 ~~~~~~~g~~~g~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---------------------------- 185 (381)
T PRK03633 135 YMMVYYLGTVLGQLLVSKVSTELMSVLP-WVTGLVLAAILPLLFTRILNQQA---------------------------- 185 (381)
T ss_pred HHHHHHHHHHHHHHHHhcccccccchHH-HHHHHHHHHHHHHHHhcccCCCC----------------------------
Confidence 9999999999999998887665333332 22222111 11111111111100
Q ss_pred Cccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhc-cchhhhHHHHHHHHHHHHHHHhhhHHhhhhhccC
Q 015075 160 GILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLF-SRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSS 238 (413)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 238 (413)
+ + ++. .+.+..+ +++.+. ..............++. +.+..+.
T Consensus 186 -----~-~----~~~-----------------------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~lp~~~~- 228 (381)
T PRK03633 186 -----E-N----HDS-----------------------TSIWPMLKLRQARL-GVNGCIISGIVLGSLYG--LMPLYLN- 228 (381)
T ss_pred -----C-C----CCC-----------------------CCHHHHHHhcchHH-HHHHHHHHHHHHHHHHH--HHHHHHH-
Confidence 0 0 000 0000011 111111 11101111101111111 1111111
Q ss_pred CCCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHH
Q 015075 239 GDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFG 318 (413)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (413)
. .+.+.. ..........+..+++.+..|++.||+|||+.+..+.....+....+. ..... ......
T Consensus 229 ~--------~g~s~~---~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~-~~~~~--~~~~~l 294 (381)
T PRK03633 229 H--------QGMSDA---SIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML-SQAAM--APALFI 294 (381)
T ss_pred H--------cCCCHH---HHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh-hhHHH--HHHHHH
Confidence 0 011111 111223344456678889999999999999877665554443332222 11111 111112
Q ss_pred HHHHhhhhhhhhheecccccccchhhhHHHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHHHHHHHHHH
Q 015075 319 VRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLA 388 (413)
Q Consensus 319 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~ 388 (413)
.........+.......|..|++.++...+..+...++|+.++|.+.+.+.+..+....+.+.+.+.++.
T Consensus 295 ~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~ 364 (381)
T PRK03633 295 LGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIY 364 (381)
T ss_pred HHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHH
Confidence 2222223456666777899998888888888888888999999999999988877666666655555544
No 65
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.90 E-value=3.3e-22 Score=188.42 Aligned_cols=130 Identities=16% Similarity=0.326 Sum_probs=104.9
Q ss_pred ccccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcc-cHHHHHHHHHHhhhcccchhHHHHHHHhhccCCCcchHHHH
Q 015075 2 LLGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSP-NYVSLVIFRCFVGVGLGGVPVFLAYFLEFVPVSHRGRWMVA 80 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~-~~~~l~~~R~l~G~~~g~~~~~~~~~~E~~p~~~Rg~~~~~ 80 (413)
.+++++.|+++||+|||+++..+.+++.++.+++++++ +++.+++.|+++|++.+..+...+++.|++|+++|++..++
T Consensus 51 ~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 130 (366)
T TIGR00886 51 AVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAVQSYSVLLLLRLFIGIAGGSFASCMPWISFFFPKKIQGTALGL 130 (366)
T ss_pred HHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhchhhHhHHHHHHHhcCHhhhhHHHHH
Confidence 36788999999999999999999999999999999999 99999999999999865555567889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhc----------CCChHHHH-HHhhHHHH-HHHHHhhcCCCCch
Q 015075 81 LSAFWTAGTIFEASLAWVVMT----------RLNWRWLL-AFSSVPSF-ALLLFYGLAPESPR 131 (413)
Q Consensus 81 ~~~~~~~G~~~~~~l~~~l~~----------~~~Wr~~f-~~~~i~~~-~~~~~~~~~pEsp~ 131 (413)
.....++|..+++.++..+.. ..+||+.| +..++... ...+.....+|+|+
T Consensus 131 ~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (366)
T TIGR00886 131 AAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGILLLPALLIFFVGADTPP 193 (366)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHHHHHHHHHHHHhcccCCc
Confidence 988888888777777665543 34899998 44344433 33445556677764
No 66
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.90 E-value=2.1e-21 Score=184.79 Aligned_cols=124 Identities=18% Similarity=0.170 Sum_probs=108.0
Q ss_pred ccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHHHHHH
Q 015075 4 GAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALS 82 (413)
Q Consensus 4 G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~ 82 (413)
.+++.|+++||+|||+++..+.++..++.++.+++++++.+++.|+++|++.+.. +...+++.|++|+++|++..++..
T Consensus 62 ~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 141 (400)
T PRK11646 62 LGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLM 141 (400)
T ss_pred HHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 3578899999999999999999999999999999999999999999999987754 666788999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHHH-HHhhcCCC
Q 015075 83 AFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFALL-LFYGLAPE 128 (413)
Q Consensus 83 ~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~~-~~~~~~pE 128 (413)
....+|..++|++++.+. .+|||+.|++.++..++.. +..+..||
T Consensus 142 ~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~~~~~~~~ 187 (400)
T PRK11646 142 MQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAFNAWLLPA 187 (400)
T ss_pred HHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 999999999999999888 6899999998877665443 33344554
No 67
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.90 E-value=1.5e-21 Score=210.29 Aligned_cols=336 Identities=14% Similarity=0.060 Sum_probs=195.9
Q ss_pred ccccchhhHhhhhcCChHHHHHHHHHHHHHHHH---HhhcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchH
Q 015075 2 LLGAYSWGIISDNYGRRKSFLGIAMVTSVAGLL---SSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRW 77 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~---~~~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~ 77 (413)
+++++++|+++||+|||++++.+.++..++.++ +..+++++.++++|+++|++.|.. +...+++.|++|+++|+++
T Consensus 61 ~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 140 (1146)
T PRK08633 61 LLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRA 140 (1146)
T ss_pred HHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhh
Confidence 367888999999999999999888766555544 445678999999999999998875 6778899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC---------CChHHHHHHhhHHH-HHHHHHhhcCCCCchHHhhccChHHHHHHHH
Q 015075 78 MVALSAFWTAGTIFEASLAWVVMTR---------LNWRWLLAFSSVPS-FALLLFYGLAPESPRYLCAKARTVDAHRILE 147 (413)
Q Consensus 78 ~~~~~~~~~~G~~~~~~l~~~l~~~---------~~Wr~~f~~~~i~~-~~~~~~~~~~pEsp~~l~~~~~~~~a~~~~~ 147 (413)
+++.+.+..+|.++++++++.+.+. .+|++.+.+..+.. ++.++..+.+||+|+....+++.
T Consensus 141 ~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 212 (1146)
T PRK08633 141 NGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGLIFAYRLPKVPAAAPEVFDK-------- 212 (1146)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHHHHHHhcCcCCCCCCcccccc--------
Confidence 9999999999999999999988765 24555544443333 33444556678877531100000
Q ss_pred HHHHHcCCCCCCCccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhccchhhhHHHH-HHHHHHHHH-HH
Q 015075 148 KMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLL-LWVLFFANV-FS 225 (413)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~ 225 (413)
+ .... .+.....++.+++.+..+...+ ..+.++... ..
T Consensus 213 ---------------------~--~~~~-----------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 252 (1146)
T PRK08633 213 ---------------------K--KYLF-----------------PKLLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQ 252 (1146)
T ss_pred ---------------------c--cccc-----------------HHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHH
Confidence 0 0000 0000011222333222222111 111111111 11
Q ss_pred hhhHHhhhhhccCCCCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHh
Q 015075 226 YYGAVLLTSKLSSGDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVF 305 (413)
Q Consensus 226 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~ 305 (413)
.+...++.. .++.+.. ...........++.+++.++.+++.||.++|..+.++.+...+.++.+..
T Consensus 253 ~~~~~~~~~------------~~g~s~~--~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~ 318 (1146)
T PRK08633 253 ANFPAYAKE------------VLGLDNT--FQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPT 318 (1146)
T ss_pred HhhHHHHHH------------HhCCCcH--HHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHH
Confidence 111111111 1111111 01122234445566788899999999999887776665555444443333
Q ss_pred cchhHHHHHHHHHHHHHhhhhhhhhheecccccccchhhhHHHHHHhhhhhhHhHHHHHHHHHhhc-cchhHHHHHHHHH
Q 015075 306 HQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTS-CHLRLAVILFEVV 384 (413)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~-~~~~~~~~~~~~~ 384 (413)
..+.+...+..+...++.....+...++..+..|++.|+++.|+.+.+..+++++++.+.+.+... .+....+++.+.+
T Consensus 319 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 398 (1146)
T PRK08633 319 APSLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALV 398 (1146)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 333333233333333333334455677888999999999999999999999888777665544321 1222233333333
Q ss_pred HHHHHHHhhcccccc
Q 015075 385 FVLAIASSLLFPFET 399 (413)
Q Consensus 385 ~~~~~~~~~~~~~et 399 (413)
.++..+......||+
T Consensus 399 ~~~~~~~~~~~~~~~ 413 (1146)
T PRK08633 399 TLIGTLYTLLLLPDS 413 (1146)
T ss_pred HHHHHHHHHHHhHHH
Confidence 333333433334444
No 68
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.90 E-value=6.5e-22 Score=178.93 Aligned_cols=318 Identities=18% Similarity=0.219 Sum_probs=206.5
Q ss_pred chhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHH---HHHHHHHHhhhcccchhHHHHHHHhhccCCCcchHHHHHH
Q 015075 6 YSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYV---SLVIFRCFVGVGLGGVPVFLAYFLEFVPVSHRGRWMVALS 82 (413)
Q Consensus 6 ~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~---~l~~~R~l~G~~~g~~~~~~~~~~E~~p~~~Rg~~~~~~~ 82 (413)
++.|++.||||.|++...+.++..+-.+..+++..++ .+++++++.|++-|...+..+++++|+||+++|.++|++.
T Consensus 67 l~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~GasFav~m~~~s~~fP~~~qG~AlGI~g 146 (417)
T COG2223 67 LPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYPSTWQLLVIGLLLGLAGASFAVGMPNASFFFPKEKQGLALGIAG 146 (417)
T ss_pred HHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHhcccceehcccccccccCChhhhhHHHHHhc
Confidence 5679999999999999999999999999998887655 9999999999987767888899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCC---hHHHHHHhhHHHHHH-HHHhhcCCCCchHHhhccChHHHHHHHHHHHHHcCCCCC
Q 015075 83 AFWTAGTIFEASLAWVVMTRLN---WRWLLAFSSVPSFAL-LLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLP 158 (413)
Q Consensus 83 ~~~~~G~~~~~~l~~~l~~~~~---Wr~~f~~~~i~~~~~-~~~~~~~pEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~ 158 (413)
..++|..+...++..+....+ ||....+-.++.++. ...++.+.|.|+...++++..
T Consensus 147 -~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~------------------ 207 (417)
T COG2223 147 -AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQL------------------ 207 (417)
T ss_pred -cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccccccc------------------
Confidence 888998888888877777777 999888777776664 455566766665311000000
Q ss_pred CCccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhccchhhhHHHHHHHHHHHHHHHhhhHHhhhhhccC
Q 015075 159 PGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSS 238 (413)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 238 (413)
+ ..++..++.+. +..+.+.++.+.-.+.++....+.+.
T Consensus 208 --------~------------------------------~~~~~v~~~~~---~W~lsllY~~tFG~Fvgfs~~l~~~~- 245 (417)
T COG2223 208 --------P------------------------------AQLKAVFSNKD---TWLLSLLYFATFGGFVGFSAYLPMYL- 245 (417)
T ss_pred --------h------------------------------hHHHHHhcCcc---hHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 0 00111111111 11122222222222222222111111
Q ss_pred CCCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhc-------chhHH
Q 015075 239 GDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFH-------QSAVV 311 (413)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~-------~~~~~ 311 (413)
.+.++.+..+.+ .......+.+...-.++|+++||+|.++.....+....+........ .+...
T Consensus 246 ------~~~fg~~~~~Ag---~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~ 316 (417)
T COG2223 246 ------VTQFGLSPVTAG---LIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGHGGSFVV 316 (417)
T ss_pred ------HHhcCCChhhHH---HHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccccccCcchHH
Confidence 112222222222 12233344444556789999999988777666555544443333322 12222
Q ss_pred HHHHHHHHHHHhhhhhhhhheecccccccchhhhHHHHHHhhhhhhHhHHHHHHHHHhhccc-hhHHHHHHHHHHHHHHH
Q 015075 312 TTVLLFGVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCH-LRLAVILFEVVFVLAIA 390 (413)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~-~~~~~~~~~~~~~~~~~ 390 (413)
....++....+.....+..+.+++.++|. .-+...|+...+|.+|++.-|...+...+.++ ....++++..+.+++.+
T Consensus 317 ~~~~~l~l~~~~G~GnGsvfk~Ip~if~~-~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v 395 (417)
T COG2223 317 FVAVFLALFVFAGLGNGSVFKMIPVIFPK-ETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALV 395 (417)
T ss_pred HHHHHHHHHHHhccCcchheeechHHHHh-hhhHHHHHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 22333333344444556788999999987 47788999999999999999999998888877 45677888888877766
Q ss_pred Hhhc
Q 015075 391 SSLL 394 (413)
Q Consensus 391 ~~~~ 394 (413)
+...
T Consensus 396 ~~~~ 399 (417)
T COG2223 396 LTWA 399 (417)
T ss_pred HHHH
Confidence 5543
No 69
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.90 E-value=3.4e-22 Score=190.72 Aligned_cols=130 Identities=23% Similarity=0.432 Sum_probs=118.7
Q ss_pred ccccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccc-hhHHHHHHHhhccCCCcchHHHH
Q 015075 2 LLGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGG-VPVFLAYFLEFVPVSHRGRWMVA 80 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~-~~~~~~~~~E~~p~~~Rg~~~~~ 80 (413)
.+|.+++|++.||++-.+.+..+.+.|++.++++....|++.+++.|++.|+.+++ .|....+++.|+.++|||..+++
T Consensus 95 ii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~ 174 (495)
T KOG2533|consen 95 IIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGI 174 (495)
T ss_pred HHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHH
Confidence 36889999999999999999999999999999999999999999999999999986 48888999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH------hcCCChHHHHHHhhHHHHHH-HHHhhcCCCCch
Q 015075 81 LSAFWTAGTIFEASLAWVV------MTRLNWRWLLAFSSVPSFAL-LLFYGLAPESPR 131 (413)
Q Consensus 81 ~~~~~~~G~~~~~~l~~~l------~~~~~Wr~~f~~~~i~~~~~-~~~~~~~pEsp~ 131 (413)
+..+.++|.++|+++++.+ ....||||.|++.++..++. ++.++++|+.|.
T Consensus 175 ~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~ 232 (495)
T KOG2533|consen 175 WYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPS 232 (495)
T ss_pred HHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChh
Confidence 9999999999999999886 23579999999999988776 566788999997
No 70
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.89 E-value=2.5e-20 Score=177.84 Aligned_cols=322 Identities=17% Similarity=0.148 Sum_probs=187.5
Q ss_pred cccchhhHhhhhc-----CChH-HHHHHHHHHHHHHHHHhhcc---cHHHHHHHHHHhhhcccch-hHHHHHHHhhccCC
Q 015075 3 LGAYSWGIISDNY-----GRRK-SFLGIAMVTSVAGLLSSFSP---NYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVS 72 (413)
Q Consensus 3 ~G~~~~g~l~Dr~-----Grr~-~~~~~~~l~~~~~~~~~~a~---~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~ 72 (413)
+.+++||+++||+ |||| .+..+.++.+++..+.++.+ +++.+++..++.++..+.. +...+++.|+.|++
T Consensus 47 ~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~ 126 (402)
T PRK11902 47 IFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPE 126 (402)
T ss_pred HHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChh
Confidence 4578999999999 8876 67887888888888777773 4677788877777665554 66778999999999
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHhcC-CChHHHHHHhhHHHHHHHHHhhcCCCCchHHhhccChHHHHHHHHHHHH
Q 015075 73 HRGRWMVALSAFWTAGTIFEASLAWVVMTR-LNWRWLLAFSSVPSFALLLFYGLAPESPRYLCAKARTVDAHRILEKMAF 151 (413)
Q Consensus 73 ~Rg~~~~~~~~~~~~G~~~~~~l~~~l~~~-~~Wr~~f~~~~i~~~~~~~~~~~~pEsp~~l~~~~~~~~a~~~~~~~~~ 151 (413)
+|++..++...++.+|.++++.++..+.+. +|||..|++.++..++..+..++.||+++.. ++.++.
T Consensus 127 ~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l~~~~~~e~~~~~---~~~~~~--------- 194 (402)
T PRK11902 127 ERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGALTTLWAPEPEVPA---RPPRSL--------- 194 (402)
T ss_pred hhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHhcCCCcccc---cccchh---------
Confidence 999999999999999999999988888775 5999999998877666555556677765310 000000
Q ss_pred HcCCCCCCCccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhccchhhhHHHHHHHHH-HHHHHHh-hhH
Q 015075 152 VNQTKLPPGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLF-FANVFSY-YGA 229 (413)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~ 229 (413)
.++. .+.++.++++|..+......... ......+ +..
T Consensus 195 ------------------~~~~-----------------------~~~~~~l~~~~~~~~~l~~~~l~~~~~~~~~~~~~ 233 (402)
T PRK11902 195 ------------------GEAV-----------------------VGPLRDFFSRRGAWALLLLIVLYKLGDAFAGSLST 233 (402)
T ss_pred ------------------HHHH-----------------------HHHHHHHHhCcCHHHHHHHHHHHHhHHHHHHHHHH
Confidence 0000 00112222222222222221111 1111111 111
Q ss_pred HhhhhhccCCCCccCccccccCCCCChhHHHHH-HHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHH---Hh
Q 015075 230 VLLTSKLSSGDNKCGSKVLHADKSKDNSLYVDV-FIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPL---VF 305 (413)
Q Consensus 230 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~---~~ 305 (413)
.++.. ..+.+. ....... .......++|.++++++.||+|||+....+.....+..+.+ ..
T Consensus 234 ~~l~~------------~~G~~~---~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~ 298 (402)
T PRK11902 234 TFLIR------------GAGFSA---GEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAV 298 (402)
T ss_pred HHHHH------------hcCCCH---HHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 11111 011111 1111111 12233467889999999999999887665554433322221 22
Q ss_pred c-chhHHHHHHHHH----HHHHhhhhhhhhheecccccccchhhhHHHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHH
Q 015075 306 H-QSAVVTTVLLFG----VRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVIL 380 (413)
Q Consensus 306 ~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~ 380 (413)
. ++.+........ ..+...........++.+.+|.+.+ ++.+.+..+++..++.+.+.+.+..+....+..
T Consensus 299 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~ 374 (402)
T PRK11902 299 TPKHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSATQY----ALLSALASVGRVYVGPTSGYLVEAYGWPGFYLM 374 (402)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHH----HHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHH
Confidence 2 222222222211 1122223345566777888876654 444444555565455577888888887766666
Q ss_pred HHHHHHHHHHHhhccc
Q 015075 381 FEVVFVLAIASSLLFP 396 (413)
Q Consensus 381 ~~~~~~~~~~~~~~~~ 396 (413)
.+++++++.++....+
T Consensus 375 ~~~~~~~~~~~~~~~~ 390 (402)
T PRK11902 375 TVVIALPGLALLWLMR 390 (402)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 6666666655554443
No 71
>PRK10054 putative transporter; Provisional
Probab=99.89 E-value=7.1e-21 Score=180.90 Aligned_cols=313 Identities=13% Similarity=0.122 Sum_probs=188.8
Q ss_pred cccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHHHHH
Q 015075 3 LGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVAL 81 (413)
Q Consensus 3 ~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~ 81 (413)
+++++.|+++||+|||+++..+.++..++.++.+++++++.++++|++.|.+.+.. +...++..|..|+++|++..++.
T Consensus 58 ~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 137 (395)
T PRK10054 58 VFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLN 137 (395)
T ss_pred HHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHH
Confidence 46788999999999999999999999999999999999999999999988766654 56678889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHHH-HHhhcCCCCchHHhhccChHHHHHHHHHHHHHcCCCCCCC
Q 015075 82 SAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFALL-LFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPG 160 (413)
Q Consensus 82 ~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~~-~~~~~~pEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~ 160 (413)
....++|..++|++++.+.+ .+||..|++.++..++.. ...+++||+++- ++.+
T Consensus 138 ~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~i~~~~~~~~~~~~----~~~~-------------------- 192 (395)
T PRK10054 138 YTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFPLVFIQIWVQRSEKA----IATE-------------------- 192 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHHHHHHHHHhccccc----cccc--------------------
Confidence 99999999999999998764 799999998877665543 334445554320 0000
Q ss_pred ccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhc-cchhhhHHHHHHHHHHHH-HHHhhhHHhhhhhccC
Q 015075 161 ILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLF-SRKLIRTTLLLWVLFFAN-VFSYYGAVLLTSKLSS 238 (413)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~ 238 (413)
+ + +.. +.+..+ +++.+.......+..+.. ....+...+... ..
T Consensus 193 ----~-~----~~~------------------------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~- 237 (395)
T PRK10054 193 ----T-G----SVW------------------------SPSVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMV-VA- 237 (395)
T ss_pred ----h-h----hhh------------------------hhhhhccCceehHHHHHHHHHHHHHHHhhhhHHHHHHH-hc-
Confidence 0 0 000 000011 111111111111111110 000011111110 00
Q ss_pred CCCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhc-chhHHHHHHHH
Q 015075 239 GDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFH-QSAVVTTVLLF 317 (413)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 317 (413)
+.. ..................+.....+.+.||.++|+.+..++....+....+... ++.+.......
T Consensus 238 ----------~~~-~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (395)
T PRK10054 238 ----------DSD-FAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAA 306 (395)
T ss_pred ----------ccc-hHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcchHHHHHHHHHH
Confidence 000 001111111222223334455677899999999988776665444433333322 22222222222
Q ss_pred HHHHHhhhhhhhhheecccccccchhhhHHHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHHHHHHHHH
Q 015075 318 GVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVL 387 (413)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~ 387 (413)
....+.....+.......+..|++.|++..+..+ .+++|..++|.+.+.+.|..+....+....++..+
T Consensus 307 ~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~ 375 (395)
T PRK10054 307 VFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVA 375 (395)
T ss_pred HHHHHHHHHHhhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHH
Confidence 2222222233455567888999999999988654 67799999999999999987665545444444333
No 72
>PRK10133 L-fucose transporter; Provisional
Probab=99.89 E-value=4.1e-20 Score=177.70 Aligned_cols=309 Identities=11% Similarity=0.069 Sum_probs=182.0
Q ss_pred ccccchhhHhhhhcCChHHHHHHHHHHHHHHHHH---hhcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchH
Q 015075 2 LLGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLS---SFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRW 77 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~---~~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~ 77 (413)
.+++++.|++.||+|||+++..+.++++++.+++ +++++++.++++|+++|+|.|.. +...+++.|+.|+++|++.
T Consensus 75 ~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~ 154 (438)
T PRK10133 75 FIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFR 154 (438)
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHH
Confidence 3678899999999999999999999999999875 57899999999999999999875 5667788898777777778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHh-cC-------------------------CChHHHHHHhh-HHHHHHHH-HhhcCCCC
Q 015075 78 MVALSAFWTAGTIFEASLAWVVM-TR-------------------------LNWRWLLAFSS-VPSFALLL-FYGLAPES 129 (413)
Q Consensus 78 ~~~~~~~~~~G~~~~~~l~~~l~-~~-------------------------~~Wr~~f~~~~-i~~~~~~~-~~~~~pEs 129 (413)
+++.+..+.+|..+++.++..+. .. .+||++|+... +..++..+ .....||.
T Consensus 155 ~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~ 234 (438)
T PRK10133 155 LNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPAL 234 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 89999999999999998876543 00 25666665433 33323222 23334542
Q ss_pred chHHhhccChHHHHHHHHHHHHHcCCCCCCCccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhcc-chh
Q 015075 130 PRYLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFS-RKL 208 (413)
Q Consensus 130 p~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 208 (413)
|. +++. + ++..+ ..+..+.+++ ++.
T Consensus 235 ~~----~~~~-----------------------------~-~~~~~--------------------~~~~~~~ll~~~~~ 260 (438)
T PRK10133 235 QS----DNHS-----------------------------D-AKQGS--------------------FSASLSRLARIRHW 260 (438)
T ss_pred Cc----cccc-----------------------------c-ccccc--------------------hhhhHHHHHhCchH
Confidence 21 0000 0 00000 0001111221 222
Q ss_pred hhHHHHHHHHHHHHHHHhhhHHhhhhhccCCCCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhChhHH
Q 015075 209 IRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLS 288 (413)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~ 288 (413)
.... +....+.......+. +...++.. +.++.+.... ........++..+|.++++++.||+|||++
T Consensus 261 ~~~~-l~~~~~~~~~~~~~~--~~~~~l~~-------~~~g~s~~~a---g~~~~~~~~~~~vG~~~~g~l~~r~g~~~~ 327 (438)
T PRK10133 261 RWAV-LAQFCYVGAQTACWS--YLIRYAVE-------EIPGMTAGFA---ANYLTGTMVCFFIGRFTGTWLISRFAPHKV 327 (438)
T ss_pred HHHH-HHHHHHHHHHHHHHH--HHHHHHhh-------hcCCCCHHHH---HHHHHHHHHHHHHHHHHHHHHHHHcCHHHH
Confidence 2211 111111111111111 11111110 0112222111 222344555677899999999999999988
Q ss_pred HHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhhhhhhhhheecccccccchhhhHHHHHHhhhhhhHhHHHHHHHHH
Q 015075 289 MVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGL 368 (413)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l 368 (413)
+..+.+.....+.......+. .....+....++....++..+....|.+|++ .+++.++.. +..+++.+.|.+.+.+
T Consensus 328 l~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~-~~~as~l~~-~~~~g~~~~~~i~G~l 404 (438)
T PRK10133 328 LAAYALIAMALCLISAFAGGH-VGLIALTLCSAFMSIQYPTIFSLGIKNLGQD-TKYGSSFIV-MTIIGGGIVTPVMGFV 404 (438)
T ss_pred HHHHHHHHHHHHHHHHHcCCh-HHHHHHHHHHHHHHHHHHHHHHHHHcccchh-hccchhHHh-HHhccchHHHHHHHHH
Confidence 776655544333322222222 2223333445556667778888888888764 567777775 3556788888888878
Q ss_pred hhccc-hhHHHHH
Q 015075 369 VTSCH-LRLAVIL 380 (413)
Q Consensus 369 ~~~~~-~~~~~~~ 380 (413)
.+..+ ....+++
T Consensus 405 ~~~~g~~~~~~~v 417 (438)
T PRK10133 405 SDAAGNIPTAELI 417 (438)
T ss_pred HHhccchHHHHHH
Confidence 77665 3444443
No 73
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.89 E-value=4.6e-20 Score=175.68 Aligned_cols=130 Identities=16% Similarity=0.162 Sum_probs=112.5
Q ss_pred ccccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHHHH
Q 015075 2 LLGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVA 80 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~ 80 (413)
.++++++|+++||+|||+++..+.++..++.++..++++++.+++.|+++|++.+.. +....+..|..++++|++..+.
T Consensus 57 ~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (394)
T PRK11652 57 GLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSL 136 (394)
T ss_pred HHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 367889999999999999999999999999999999999999999999999988764 4555778899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHH-HHHhhcCCCCch
Q 015075 81 LSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFAL-LLFYGLAPESPR 131 (413)
Q Consensus 81 ~~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~-~~~~~~~pEsp~ 131 (413)
.+.+..+|..++|.+++.+.+..|||+.|++.++..++. ....++.||+++
T Consensus 137 ~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 188 (394)
T PRK11652 137 LNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPETRP 188 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCccCc
Confidence 999999999999999999888889999999887766544 344556788653
No 74
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.88 E-value=9.3e-21 Score=177.91 Aligned_cols=287 Identities=17% Similarity=0.170 Sum_probs=172.0
Q ss_pred cchhhHhhhhc-----CChHHH-HHHHHHHHHHHHHHhhcc---cHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCc
Q 015075 5 AYSWGIISDNY-----GRRKSF-LGIAMVTSVAGLLSSFSP---NYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHR 74 (413)
Q Consensus 5 ~~~~g~l~Dr~-----Grr~~~-~~~~~l~~~~~~~~~~a~---~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~R 74 (413)
++++|++.||+ ||||.+ ..+.++.+++....++.+ +.+.+.+..++.|++.+.. +...+++.|++|+++|
T Consensus 38 ~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r 117 (356)
T TIGR00901 38 KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEEL 117 (356)
T ss_pred HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhh
Confidence 78999999998 999974 667777778877777874 5556677777777766554 5667889999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhcCCC--------hHHHHHHhhHHHHHHHHHhh-cCCCCchHHhhccChHHHHHH
Q 015075 75 GRWMVALSAFWTAGTIFEASLAWVVMTRLN--------WRWLLAFSSVPSFALLLFYG-LAPESPRYLCAKARTVDAHRI 145 (413)
Q Consensus 75 g~~~~~~~~~~~~G~~~~~~l~~~l~~~~~--------Wr~~f~~~~i~~~~~~~~~~-~~pEsp~~l~~~~~~~~a~~~ 145 (413)
+++.++...+..+|.++++.++..+.+..+ ||..|++.++..++..+..+ ..||+++. +.+. +
T Consensus 118 ~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~~~~~~~e~~~~---~~~~-~---- 189 (356)
T TIGR00901 118 GYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWTALLILPGLLVTLFLAKEPQED---ASVP-K---- 189 (356)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHHhccCCCcc---cccc-h----
Confidence 999999999999999999999988877777 99999998887766555444 35664320 0000 0
Q ss_pred HHHHHHHcCCCCCCCccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhccchhhhHHHHHHHHHHHHHHH
Q 015075 146 LEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFS 225 (413)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (413)
.+..+. .+.++.+++++..+.........+.....
T Consensus 190 ----------------------~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (356)
T TIGR00901 190 ----------------------PLTQAV-----------------------LKPIREFFQRKNMIQALLLLLLIVLYKLG 224 (356)
T ss_pred ----------------------hHHHHH-----------------------HHHHHHHHHhcCchHHHHHHHHHHHHHHH
Confidence 000000 00111122222111111122222222222
Q ss_pred hhhHH-hhhhhccCCCCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHH
Q 015075 226 YYGAV-LLTSKLSSGDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLV 304 (413)
Q Consensus 226 ~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~ 304 (413)
++... +....+. + .+.+....+ ........+..+++.++++++.||+|||+.+..+++...+....+.
T Consensus 225 ~~~~~~~~~~~l~--------~-~g~~~~~~g--~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~ 293 (356)
T TIGR00901 225 DSAATVLTTLFLL--------D-MGFSKEEIA--LVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFV 293 (356)
T ss_pred HHHHHHHHHHHHH--------H-cCCCHHHHH--HHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 22221 1111111 0 111111111 1112222345677899999999999998887766665544333222
Q ss_pred h---c--------chhHHHHHHHHHHHHHhhhhhhhhheecccccccchhhhHHHHHHhhhh
Q 015075 305 F---H--------QSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGK 355 (413)
Q Consensus 305 ~---~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ 355 (413)
. . .+.+......+...++.....+...++..|..|++.|++..|+.+++.+
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 294 WLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 1 1 1112222222233344444566788899999999999999999988764
No 75
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.88 E-value=7.2e-21 Score=204.42 Aligned_cols=304 Identities=13% Similarity=0.022 Sum_probs=182.1
Q ss_pred ccccchhhHhhhhcCChHHHHH---HHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchH
Q 015075 2 LLGAYSWGIISDNYGRRKSFLG---IAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRW 77 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~~~~~---~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~ 77 (413)
++.+++.|+++||+|||+++.. ..+++.+..+.....+|++.++++|+++|++.+.. |...+++.|++|+++|+++
T Consensus 66 ~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a 145 (1140)
T PRK06814 66 FIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGA 145 (1140)
T ss_pred HHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchh
Confidence 3567888999999999997533 22333333334444589999999999999998865 7888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHHHHHhhcCCCCchHHhhccChHHHHHHHHHHHHHcCCCC
Q 015075 78 MVALSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFALLLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKL 157 (413)
Q Consensus 78 ~~~~~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~~~~~~~~pEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~ 157 (413)
+++.+.+.++|.++|+++++.+....+|++.|+...+..++.++..+++||+++- .++...
T Consensus 146 ~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~----------------- 206 (1140)
T PRK06814 146 NALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVLGWLASLFIPKTGNA--APDLKI----------------- 206 (1140)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhCCCCCCC--CCCCee-----------------
Confidence 9999999999999999999999999999999965555555555566667765420 000000
Q ss_pred CCCccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhccchhhhHHHHH-HHHHHHHHHHhhhH-Hhhhhh
Q 015075 158 PPGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLL-WVLFFANVFSYYGA-VLLTSK 235 (413)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~ 235 (413)
+.... ++ ....++...+.+..+...+. ...++.. ... .+++.+
T Consensus 207 -------~~~~~-~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~p~~ 251 (1140)
T PRK06814 207 -------DRNII-RS-----------------------TITLLKYAKADKRIWLAILGISWFWLVG----AVVLSQLPLL 251 (1140)
T ss_pred -------ccchH-HH-----------------------HHHHHHHHhcCchHHHHHHHHHHHHHHH----HHHHHHhHHH
Confidence 00000 00 00112222222222222111 1111111 111 111111
Q ss_pred ccCCCCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhc---------
Q 015075 236 LSSGDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFH--------- 306 (413)
Q Consensus 236 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~--------- 306 (413)
+. +.++... ..........+++.++|.++.|+++||.++++.+..+.++..+..+.+...
T Consensus 252 ~~--------~~~g~~~---~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 320 (1140)
T PRK06814 252 AK--------ETLGGDE---NVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPA 320 (1140)
T ss_pred HH--------HHcCCch---HHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccc
Confidence 11 0111111 111222345556778889999999987766554433333222222111111
Q ss_pred -----------chhHHHHHHHHHHHHHhhhhhhhhheecccccccchhhhHHHHHHhhhhhhHhHHHHHHHHHhh
Q 015075 307 -----------QSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVT 370 (413)
Q Consensus 307 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~ 370 (413)
.+.+...+..+..+++.........++..+..|++.||.+.|+.+.+..++..+++.+.+.+.+
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~ 395 (1140)
T PRK06814 321 QLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQA 395 (1140)
T ss_pred cccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222222222233333333444567888999999999999999999999999999988887764
No 76
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.88 E-value=7.5e-20 Score=174.31 Aligned_cols=297 Identities=13% Similarity=0.079 Sum_probs=187.7
Q ss_pred ccccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhh---cccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchH
Q 015075 2 LLGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSF---SPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRW 77 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~---a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~ 77 (413)
++++++.|++.||+|||+++..+.++++++.++... .++++.+++.|++.|+|.|.. +...+++.|+.|+++|++.
T Consensus 52 ~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~ 131 (410)
T TIGR00885 52 FIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRR 131 (410)
T ss_pred HHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHH
Confidence 467888999999999999999999999999888543 468999999999999999875 6677889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC--------------------------CChHHHHHHhhHHHHHHHHHhhc--CCCC
Q 015075 78 MVALSAFWTAGTIFEASLAWVVMTR--------------------------LNWRWLLAFSSVPSFALLLFYGL--APES 129 (413)
Q Consensus 78 ~~~~~~~~~~G~~~~~~l~~~l~~~--------------------------~~Wr~~f~~~~i~~~~~~~~~~~--~pEs 129 (413)
.++.+...++|..+++.++..+... .+||++|++.+++.++..+...+ .||.
T Consensus 132 ~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~~~p~~ 211 (410)
T TIGR00885 132 LNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLTKMPAL 211 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 9999999999999999988876422 36999998877766554333322 3432
Q ss_pred chHHhhccChHHHHHHHHHHHHHcCCCCCCCccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhcc-chh
Q 015075 130 PRYLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFS-RKL 208 (413)
Q Consensus 130 p~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 208 (413)
++ ++ + ++++.. +..+...+ ++.
T Consensus 212 ~~-----~~--------------------------~---~~~~~~-----------------------~~~~~~~~~~~~ 234 (410)
T TIGR00885 212 NH-----SD--------------------------A---KQISFS-----------------------ASLSRLARIRHY 234 (410)
T ss_pred Cc-----cc--------------------------c---ccccch-----------------------hhHHHHHhChhH
Confidence 11 00 0 000000 00001111 122
Q ss_pred hhHHHHHHHHHHHHHHHhhhHHhhhhhccCCCCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhChhHH
Q 015075 209 IRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLS 288 (413)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~ 288 (413)
.. ..+..+.+.....+.+ .++..+..... .+. .......+.. .......+|.++++++.||+++|+.
T Consensus 235 ~~-~~l~~f~yvg~e~~~~--s~l~~y~~~~~-------~~~-~~~~a~~~~~--~~~~~~~vGR~~~~~l~~r~~~~~~ 301 (410)
T TIGR00885 235 RE-GVIAQFFYVGVQIMCW--TFIIQYAVRLI-------PGM-TAGFAANYNI--GAMVIFFISRFIGTWLISYLAAHKV 301 (410)
T ss_pred HH-HHHHHHHHHHHHHHHH--HHHHHHHhhcc-------CCC-CHHHHHHHHH--HHHHHHHHHHHHHHHHHHHcCHHHH
Confidence 11 1111111222211111 11222111000 000 0011111111 1123456789999999999999988
Q ss_pred HHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhhhhhhhhheecccccccchhhhHHHHHHhhhhhhHhHHHHHHHHH
Q 015075 289 MVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGL 368 (413)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l 368 (413)
+..+.+.+.+..+.....++.. ....+....++....++..+....+..+++.+..+.+++.++ +|+.+.|.+.+.+
T Consensus 302 l~i~~~~~~~~~ll~~~~~~~~-~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~~--~Gga~~p~l~G~~ 378 (410)
T TIGR00885 302 LMAYAIIGMALCLGSIFAGGHV-GLYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMAI--IGGGIVPPLQGFI 378 (410)
T ss_pred HHHHHHHHHHHHHHHHHcCChH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHH--hccchHHHHHHHH
Confidence 7776666655554444433322 233444445666667788888999999988876677776665 9999999999999
Q ss_pred hhc
Q 015075 369 VTS 371 (413)
Q Consensus 369 ~~~ 371 (413)
.|.
T Consensus 379 ~d~ 381 (410)
T TIGR00885 379 IDM 381 (410)
T ss_pred HHH
Confidence 884
No 77
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.88 E-value=3.2e-20 Score=178.22 Aligned_cols=345 Identities=17% Similarity=0.127 Sum_probs=181.2
Q ss_pred ccccchhhHhhhhcCChHHHHHHHHHHHHHHHHH---hhccc-----HHHHHHHHHHhhhcccch-hHHHHHHHhhccCC
Q 015075 2 LLGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLS---SFSPN-----YVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVS 72 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~---~~a~~-----~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~ 72 (413)
.++++++|+++||+|||+++.++..+..++.... ..++. .....+.+++.|.+.... +....+. |.. .+
T Consensus 60 ~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~ 137 (420)
T PRK09528 60 LLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYI-ERV-SR 137 (420)
T ss_pred HHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHH-HHH-Hh
Confidence 3578899999999999999988766655443321 11111 111223344444333222 2222222 323 34
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHHHHHhhcC-CCCchHHhhccChHHHHHHHHHHHH
Q 015075 73 HRGRWMVALSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFALLLFYGLA-PESPRYLCAKARTVDAHRILEKMAF 151 (413)
Q Consensus 73 ~Rg~~~~~~~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~~~~~~~~-pEsp~~l~~~~~~~~a~~~~~~~~~ 151 (413)
+||+..+......++|..+++++++.+.+ .+||+.|+..++..++.....++. ||.|+- +++. +
T Consensus 138 ~~g~~~g~~~~~~~~g~~i~~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~---------- 202 (420)
T PRK09528 138 RSGFEYGRARMWGSLGWALCAFIAGILFN-INPQINFWLGSGSALILLVLLFFAKPDAPST---AKVA-N---------- 202 (420)
T ss_pred hccccchhhHHhhhHHHHHHHHHHHHHHh-cCchHhHHHHHHHHHHHHHHHhcccccccch---hhhc-c----------
Confidence 56777888888889999999999887765 599999998887776655444443 332220 0000 0
Q ss_pred HcCCCCCCCccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhc-cchhhhHHHHHHHHHH-HHHHHhhhH
Q 015075 152 VNQTKLPPGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLF-SRKLIRTTLLLWVLFF-ANVFSYYGA 229 (413)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~ 229 (413)
+ + +.++++ ...+..+..+ +++.+...+....... .........
T Consensus 203 ---~-----------~-~~~~~~--------------------~~~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~ 247 (420)
T PRK09528 203 ---A-----------L-GANASA--------------------VSLKDALALLKLPKFWFLVLYVIGVACFYDVFDQQFP 247 (420)
T ss_pred ---c-----------h-hccccc--------------------ccHHHHHHHccCCCeEeehHHHHHHHHHHHHHHHHHH
Confidence 0 0 000000 0000011111 1221111111111100 011111111
Q ss_pred HhhhhhccCCCCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchh
Q 015075 230 VLLTSKLSSGDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSA 309 (413)
Q Consensus 230 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~ 309 (413)
.+..+.... ...+.........+..+...++.++.|++.||+|||+.+..+.+...+....+.+.++.
T Consensus 248 ~~~~~~~~~------------~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~ 315 (420)
T PRK09528 248 NFFASFFAT------------PEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGP 315 (420)
T ss_pred HHHHHHHhc------------cCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccH
Confidence 111111100 00000111112233445566788999999999999998777666555444444444443
Q ss_pred HHHHHHHHHHHHHhhhhhhhhheecccccccchhhhHHHH-HHhhhhhhHhHHHHHHHHHhhccchhHHHHHHHHHHHHH
Q 015075 310 VVTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTTGFGV-ASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLA 388 (413)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~-~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~ 388 (413)
+......................+.+|.+|++.|++..+. .+..+.+|++++|.+.+.+.|..+...++...+++.++.
T Consensus 316 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~ 395 (420)
T PRK09528 316 LEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLF 395 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHH
Confidence 3322222222222222233445678899999999988766 566778999999999999998877777777777776666
Q ss_pred HHHhhccc-ccccCcchhhhhhh
Q 015075 389 IASSLLFP-FETMGRELKDTVDA 410 (413)
Q Consensus 389 ~~~~~~~~-~et~~~~l~~~~~~ 410 (413)
.++.++.. ++.+...++++.+|
T Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~ 418 (420)
T PRK09528 396 TLISVFTLSGDRELSLLRRQVPE 418 (420)
T ss_pred HHHHHHHhcCCchhhHHHhhCcc
Confidence 55555444 33333445454444
No 78
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.88 E-value=1.2e-19 Score=173.54 Aligned_cols=330 Identities=12% Similarity=0.073 Sum_probs=187.7
Q ss_pred ccccchhhHhhhhcCC-hHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccch-hHHH----HHHH----hhccC
Q 015075 2 LLGAYSWGIISDNYGR-RKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFL----AYFL----EFVPV 71 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Gr-r~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~-~~~~----~~~~----E~~p~ 71 (413)
+++++++|+++||+|| |+++.++.++++++..+..++++++.+.+.|++.|++.+.. +... .+.. |....
T Consensus 52 ~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~ 131 (418)
T TIGR00889 52 ILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQVTTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTD 131 (418)
T ss_pred HHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhc
Confidence 4688999999999965 77888888888888888899999999999999999976543 3322 2222 33333
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHHHHHhhcCCCCchHHhhccChHHHHHHHHHHHH
Q 015075 72 SHRGRWMVALSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFALLLFYGLAPESPRYLCAKARTVDAHRILEKMAF 151 (413)
Q Consensus 72 ~~Rg~~~~~~~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~~~~~~~~pEsp~~l~~~~~~~~a~~~~~~~~~ 151 (413)
..|.+..+ .+|..+++.+++.+....+|+. |++.++..++..+..+++||+|+- +++.++
T Consensus 132 ~~~~r~~G------~lG~~ig~~l~g~l~~~~~~~~-f~~~~~~~~~~~~~~~~~~e~~~~---~~~~~~---------- 191 (418)
T TIGR00889 132 FPPIRVMG------TIGFIAAMWAVSLLDIELSNIQ-LYITAGSSALLGVFALTLPDIPVA---KSTAKM---------- 191 (418)
T ss_pred CCCeeeeh------hHHHHHHHHHHHHhcccchhHH-HHHHHHHHHHHHHHHhcCCCCCCC---cccccc----------
Confidence 34555444 3577777777776643345664 445555454444455678887630 000000
Q ss_pred HcCCCCCCCccccchhhhhhhhccccccccccchhhhcchhhccccchhhh-hccchhhhHHHHHHHHHHHHHHHhhhHH
Q 015075 152 VNQTKLPPGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFM-LFSRKLIRTTLLLWVLFFANVFSYYGAV 230 (413)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (413)
+.. +.. .. ..+. ..+++.........+....... ++ .
T Consensus 192 ---------------~~~--~~~---------------------~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~-~~--~ 229 (418)
T TIGR00889 192 ---------------SIK--VML---------------------GL-DAFILFKNKRMAIFFFFSMLLGAPLQI-TN--I 229 (418)
T ss_pred ---------------CHH--HHh---------------------hh-hHHHHhcCCCeeeHHHHHHHHHhHHHH-HH--H
Confidence 000 000 00 0000 1112221111111111111111 11 1
Q ss_pred hhhhhccCCCCccCccccccCCC-----CChhHHHHHHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHh
Q 015075 231 LLTSKLSSGDNKCGSKVLHADKS-----KDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVF 305 (413)
Q Consensus 231 ~~~~~l~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~ 305 (413)
+....+.. .+.+.. ..........+..+..+++.+..++++||+|||+.+..+.+...+....+..
T Consensus 230 ~~~~~~~~---------~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~ 300 (418)
T TIGR00889 230 FGNGFLHE---------FGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAY 300 (418)
T ss_pred hHHHHHHH---------hcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH
Confidence 11111110 000000 0011122334555567788899999999999999988877766554433333
Q ss_pred cc-hh---HHHHHHHHHHHHHhhhhhhhhheecccccccchhhhHHHHHH-hhhhhhHhHHHHHHHHHhhccc------h
Q 015075 306 HQ-SA---VVTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTTGFGVAS-SLGKVGGMVCPLVAVGLVTSCH------L 374 (413)
Q Consensus 306 ~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~-~~~~~~~~~~p~~~~~l~~~~~------~ 374 (413)
.. +. .......+....+.....+....+..|.+|++.|+++.|+.+ ....+|++++|.+.+.+.+..+ +
T Consensus 301 ~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~ 380 (418)
T TIGR00889 301 GDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDW 380 (418)
T ss_pred cCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCch
Confidence 21 11 111112222222222333455677899999999999999997 5567899999999999888753 3
Q ss_pred hHHHHHHHHHHHHHHHHhhcccccccCc
Q 015075 375 RLAVILFEVVFVLAIASSLLFPFETMGR 402 (413)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~et~~~ 402 (413)
...+.+.+++.+++.+..+++.||+++.
T Consensus 381 ~~~f~~~~~~~~i~~~l~~~~~~~~~~~ 408 (418)
T TIGR00889 381 QTMWLFFAGYIAILAVLFMIFFKYSHNA 408 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 4556666677677777777777888664
No 79
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.87 E-value=6.5e-23 Score=186.81 Aligned_cols=129 Identities=21% Similarity=0.346 Sum_probs=114.9
Q ss_pred ccccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHHHH
Q 015075 2 LLGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVA 80 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~ 80 (413)
++.++++|+++||+.||.++..+..+|.++.+.++++..|+++.++|.+.|+|++.+ |.+.+++++.+|.++|+++.++
T Consensus 82 ~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~i 161 (493)
T KOG1330|consen 82 MIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGI 161 (493)
T ss_pred HHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHH
Confidence 356889999999999999999999999999999999999999999999999999986 7888999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCC-hHHHHHHhhHHHHHHHH-HhhcCCCCc
Q 015075 81 LSAFWTAGTIFEASLAWVVMTRLN-WRWLLAFSSVPSFALLL-FYGLAPESP 130 (413)
Q Consensus 81 ~~~~~~~G~~~~~~l~~~l~~~~~-Wr~~f~~~~i~~~~~~~-~~~~~pEsp 130 (413)
++.+.++|..+|-+++..+....+ |||.|+..++.+++..+ .+++.+|-+
T Consensus 162 fy~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~ 213 (493)
T KOG1330|consen 162 FYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPE 213 (493)
T ss_pred hhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCcc
Confidence 999999999999888887766544 99999999999987644 445555543
No 80
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.87 E-value=2.5e-19 Score=169.72 Aligned_cols=312 Identities=13% Similarity=0.015 Sum_probs=185.9
Q ss_pred cccchhhHhhhhcCChHHH----HHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccc-hhHHHHHHHhhccCCCcchH
Q 015075 3 LGAYSWGIISDNYGRRKSF----LGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGG-VPVFLAYFLEFVPVSHRGRW 77 (413)
Q Consensus 3 ~G~~~~g~l~Dr~Grr~~~----~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~-~~~~~~~~~E~~p~~~Rg~~ 77 (413)
++++++|+++||+|||+.. ..+..++.+ .....+++++.+++.|+++|.+.+. .|...++..|+ .++|++.
T Consensus 54 ~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~ 129 (382)
T TIGR00902 54 AGGLFFAPLIKDANHIIIALRLLALASAIFAA--AFSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLD 129 (382)
T ss_pred HHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH--HHHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCC
Confidence 5678999999999985543 222222222 2445788999999999999987665 46666666664 5788999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHHHHHhhcCCCCchHHhhccChHHHHHHHHHHHHHcCCCC
Q 015075 78 MVALSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFALLLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKL 157 (413)
Q Consensus 78 ~~~~~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~~~~~~~~pEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~ 157 (413)
.+......++|.++++++++.+.+.+|||..|++..+..++... .+.++|+++ +++.+
T Consensus 130 ~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~~~~~~-~~~~~~~~~----~~~~~----------------- 187 (382)
T TIGR00902 130 YGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAGLAFMLI-GFLIKPTIP----PKDAI----------------- 187 (382)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHH-HHHcCCCCC----CCccc-----------------
Confidence 99999999999999999999999999999999876554333222 233344321 00000
Q ss_pred CCCccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhcc-chhhhHHHHHHHHHHHHHHHhhhHHhhhhhc
Q 015075 158 PPGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFS-RKLIRTTLLLWVLFFANVFSYYGAVLLTSKL 236 (413)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 236 (413)
++ ++.+ ..+..+..++ ++.........+.. .....++. +.+..+
T Consensus 188 -----------~~-~~~~--------------------~~~~~~~~l~~~~~~~~l~~~~l~~-~~~~~~~~--~~~~~l 232 (382)
T TIGR00902 188 -----------PE-DESQ--------------------GDSAFIALLKNPMNLRFLAAVCLIQ-GAHAAYYG--FSAIYW 232 (382)
T ss_pred -----------cc-cccc--------------------cchhHHHHHcChHHHHHHHHHHHHH-HHHHHHHH--HHHHHH
Confidence 00 0000 0001112222 22222111111111 11111111 111111
Q ss_pred cCCCCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHHHHHHH
Q 015075 237 SSGDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLL 316 (413)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (413)
. ..+.+....+ ....+..+..+++..+.+++.||+|+|+.+..+.+...+....+.+.++.+......
T Consensus 233 ~---------~~g~s~~~~g---~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q 300 (382)
T TIGR00902 233 Q---------AAGISASATG---LLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQ 300 (382)
T ss_pred H---------HCCCCHhHHH---HHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHH
Confidence 1 0111111111 223346667778888899999999999988887777766655555444444333333
Q ss_pred HHHHHHhhhhhhhhheecccccccchhhhHHHHHHhh-hhhhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHH
Q 015075 317 FGVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSL-GKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAI 389 (413)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~-~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~ 389 (413)
....+......+....+..+. |++.|+++.++.+.. ..+|..++|.+.|.+.|..+. ..++..+++.+++.
T Consensus 301 ~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~ 372 (382)
T TIGR00902 301 ILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAF 372 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHH
Confidence 333333334445566677787 999999999998754 468889999999999988764 44555555555443
No 81
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.87 E-value=1.4e-19 Score=169.81 Aligned_cols=298 Identities=14% Similarity=0.136 Sum_probs=175.6
Q ss_pred ccccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHHHH
Q 015075 2 LLGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVA 80 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~ 80 (413)
.+++++.|+++||+|||+++..+.++..++.++. .+++++.+++.|+++|++.|.. +....++.|++| ++|+++++.
T Consensus 49 ~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~ 126 (355)
T TIGR00896 49 AVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFAGTALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGL 126 (355)
T ss_pred HHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHHHHHHHHHHHHHhccchHHHHHhCc-chhhHHHHH
Confidence 4678899999999999999999998888888877 7899999999999999998864 445567788886 689999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCC--ChHHHHHHhhHHHHHHHHHhhcCCCCchHHhhccChHHHHHHHHHHHHHcCCCCC
Q 015075 81 LSAFWTAGTIFEASLAWVVMTRL--NWRWLLAFSSVPSFALLLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLP 158 (413)
Q Consensus 81 ~~~~~~~G~~~~~~l~~~l~~~~--~Wr~~f~~~~i~~~~~~~~~~~~pEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~ 158 (413)
++....+|..+++.++..+.+.. +||+.|.+.++..++.. ..++||+++. + + +
T Consensus 127 ~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~--~~~~~~~~~~---~-~----------------~--- 181 (355)
T TIGR00896 127 YSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLAL--LAWIPQVRRR---V-A----------------A--- 181 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHH--HHHhhhhccc---c-C----------------C---
Confidence 99999999999998888776654 49998877665443322 2234443210 0 0 0
Q ss_pred CCccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhccchhhhHHHHHHHHHHHHHHHhhhHHhhhhhccC
Q 015075 159 PGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSS 238 (413)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 238 (413)
+ +.. ++ ...+..++.+.... ...........++....+.+.+..
T Consensus 182 ------~------~~~----~~-----------------~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~lp~~~~ 225 (355)
T TIGR00896 182 ------N------QTT----TR-----------------LTPVRIWRSPLAWQ---VTVFFGLQSGLYYSLIGWLPAILI 225 (355)
T ss_pred ------C------CCC----CC-----------------CCCchhhcCHhHHH---HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 000 00 00001111111111 111111122222222211111110
Q ss_pred CCCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHh-ChhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHH
Q 015075 239 GDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKI-GRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLF 317 (413)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (413)
.++.+.... ........++.+++.++.|++.||+ +||.....+.....+....+....+..... ...
T Consensus 226 --------~~g~~~~~~---g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 293 (355)
T TIGR00896 226 --------SHGASAATA---GSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHGLWA-WAL 293 (355)
T ss_pred --------HcCCCHHHH---HHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHH-HHH
Confidence 011111111 1223445667788999999999999 455555554444433333222222111111 112
Q ss_pred HHHHHhhhhhhhhheecc-cccccchhhhHHHHHHhhhhhhHhHHHHHHHHHhhccch
Q 015075 318 GVRMCVTGTITVATIYAP-EIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHL 374 (413)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~-e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~ 374 (413)
...++.....+....... +..+++.++...++.+.++++++.++|.+.+.+.+..+.
T Consensus 294 l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g~ 351 (355)
T TIGR00896 294 VLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISGN 351 (355)
T ss_pred HHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 222333333344344444 344467788999999999999999999999988887653
No 82
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.86 E-value=1.8e-19 Score=174.02 Aligned_cols=305 Identities=15% Similarity=0.090 Sum_probs=179.3
Q ss_pred ccccchhhHhhhh----cCChH-HHHHHHHHHHHHHHHHhhccc------HHHHHHHHHHhhhcccch-hHHHHHHHhhc
Q 015075 2 LLGAYSWGIISDN----YGRRK-SFLGIAMVTSVAGLLSSFSPN------YVSLVIFRCFVGVGLGGV-PVFLAYFLEFV 69 (413)
Q Consensus 2 ~~G~~~~g~l~Dr----~Grr~-~~~~~~~l~~~~~~~~~~a~~------~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~ 69 (413)
.+.+++.|+++|| +|||| .++.+.++++++.+++...++ ...+++.+++.+++.+.. ....++..|..
T Consensus 49 ~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~ 128 (437)
T TIGR00792 49 AITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLVYAYITYILLGLFYSFVNIPYWSLVPAIT 128 (437)
T ss_pred HhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcccHhhCccccc
Confidence 3678899999997 78855 566777888888888877764 456777888888876654 34456777877
Q ss_pred -cCCCcchHHHHHHHHHHHHHHHHHHHHHHHh-------cCCChHHHHHHhhHHHHHHHH-HhhcCCCCchHHhhccChH
Q 015075 70 -PVSHRGRWMVALSAFWTAGTIFEASLAWVVM-------TRLNWRWLLAFSSVPSFALLL-FYGLAPESPRYLCAKARTV 140 (413)
Q Consensus 70 -p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~l~-------~~~~Wr~~f~~~~i~~~~~~~-~~~~~pEsp~~l~~~~~~~ 140 (413)
++++|++..++.+.+..+|.++++.+...+. +..+||+.+++.+++.++..+ ..+..+|+++. +.
T Consensus 129 ~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~~~-----~~- 202 (437)
T TIGR00792 129 LDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLIICFFGTKERYSE-----IP- 202 (437)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHHHHHcCCEecCCC-----CC-
Confidence 5689999999988888888877766655443 246899999888887766543 44556665420 00
Q ss_pred HHHHHHHHHHHHcCCCCCCCccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhccchhhhHHHHHHHHHH
Q 015075 141 DAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFF 220 (413)
Q Consensus 141 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (413)
+ ++ +++. + ..+.++.+++.|..+.... ..+
T Consensus 203 ------------------------~---~~-~~~~--------~-----------~~~~~~~l~~~~~~~~~~~---~~~ 232 (437)
T TIGR00792 203 ------------------------K---NI-EKKL--------S-----------LKQIFKALFKNDQLLILCL---AYL 232 (437)
T ss_pred ------------------------c---cc-ccCC--------C-----------HHHHHHHHhCCHHHHHHHH---HHH
Confidence 0 00 0000 0 0011222222222211111 111
Q ss_pred HHHHHhhhHHhhhhhccCCCCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHH
Q 015075 221 ANVFSYYGAVLLTSKLSSGDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFL 300 (413)
Q Consensus 221 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~ 300 (413)
.....++....+...+.. ...+ .. ........+..+..+++.++.++++||+|||+.+..+.+...+..
T Consensus 233 ~~~~~~~~~~~~~~~~~~-------~~~~--~~--~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~ 301 (437)
T TIGR00792 233 FYNLAFNIKNGVQVYYFT-------YVLG--DP--ELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGY 301 (437)
T ss_pred HHHHHHHHHcchhheeEe-------eecC--Ch--HHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 111222111111111110 0011 01 111112234456677888999999999999998877766554444
Q ss_pred HHHHhc-chhHHHHHHHHHHHHHhhhhhhhhheecccccc-------cchhhhHHHHHHhhhhhhHhHHHHHHHHHhhcc
Q 015075 301 LPLVFH-QSAVVTTVLLFGVRMCVTGTITVATIYAPEIYP-------TSARTTGFGVASSLGKVGGMVCPLVAVGLVTSC 372 (413)
Q Consensus 301 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p-------~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~ 372 (413)
+.+... ++............+......+..+.+.+|..| ++.++...|+.+.+.++++.+++.+.+.+.+..
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~ 381 (437)
T TIGR00792 302 LIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGII 381 (437)
T ss_pred HHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 333332 222222222222333333345567777777765 567899999999999999999999998887654
Q ss_pred c
Q 015075 373 H 373 (413)
Q Consensus 373 ~ 373 (413)
+
T Consensus 382 G 382 (437)
T TIGR00792 382 G 382 (437)
T ss_pred C
Confidence 3
No 83
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.85 E-value=5.3e-19 Score=168.41 Aligned_cols=328 Identities=17% Similarity=0.152 Sum_probs=179.3
Q ss_pred ccccchhhHhhhhcCChHHHHHHHHHHHHHHHHH---hhcc-----cHHHHHHHHHHhhhcccch-hHHHHHHHhhccCC
Q 015075 2 LLGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLS---SFSP-----NYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVS 72 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~---~~a~-----~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~ 72 (413)
.++++++|+++||+|||+.+..+.+.++++.... .+++ ....+++.|++.|++.+.. +....+..|..+
T Consensus 52 ~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-- 129 (396)
T TIGR00882 52 ILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSR-- 129 (396)
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhh--
Confidence 3678899999999999999988776665443321 2222 2334567788888887754 555556655433
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHHHHHhhc-CCCCchHHhhccChHHHHHHHHHHHH
Q 015075 73 HRGRWMVALSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFALLLFYGL-APESPRYLCAKARTVDAHRILEKMAF 151 (413)
Q Consensus 73 ~Rg~~~~~~~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~~~~~~~-~pEsp~~l~~~~~~~~a~~~~~~~~~ 151 (413)
+++...+......++|..+++.+++.+.+ .+||+.|++.++..++..+..+. .||+|+. ++.+++
T Consensus 130 ~~~~~~g~~~~~~~~g~~~g~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~--------- 195 (396)
T TIGR00882 130 NSNFEYGKARMFGCVGWALCASIAGILFS-IDPQIVFWLGSGFALILMLLLMFAKPKAPSS----ATVANA--------- 195 (396)
T ss_pred hcccccchhhhhcccHHHHHHHHHhhhhc-cCchHHHHHHHHHHHHHHHHHHHhCCCCchh----hhhhcc---------
Confidence 33445566667778899999988887654 69999999888777665443333 4444321 000000
Q ss_pred HcCCCCCCCccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhcc-chhhhHHHHHHHHHH-HHHHHhhhH
Q 015075 152 VNQTKLPPGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFS-RKLIRTTLLLWVLFF-ANVFSYYGA 229 (413)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~ 229 (413)
.+ .++++ ...++.+.+++ ++.+........... .+.......
T Consensus 196 ---~~-------------~~~~~--------------------~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~ 239 (396)
T TIGR00882 196 ---LG-------------ANASA--------------------FSLKLALELFRQRKFWMFVLYVVGVACVYDVFDQQFA 239 (396)
T ss_pred ---cc-------------cccCC--------------------CCHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 00000 00001111221 222111111111110 011111111
Q ss_pred HhhhhhccCCCCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchh
Q 015075 230 VLLTSKLSSGDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSA 309 (413)
Q Consensus 230 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~ 309 (413)
.+....+. ..............+..+...++....+++.||+|||+.+..+.....+........++.
T Consensus 240 ~y~~~~~~------------~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~ 307 (396)
T TIGR00882 240 NFFTSFFA------------TPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTA 307 (396)
T ss_pred HHHHHhcc------------ccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCCh
Confidence 11111110 000001111122334455566677888999999999998777665544433333333333
Q ss_pred HHHHHHHHHHHHHhhhhhhhhheecccccccchhhhHHHH-HHhhhhhhHhHHHHHHHHHhhccchhHHHHHHHHHHHHH
Q 015075 310 VVTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTTGFGV-ASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLA 388 (413)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~-~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~ 388 (413)
+...........+..........+..+..|++.++++.+. .+....+|++++|.+.+.+.+..+...++.+.+++.++.
T Consensus 308 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~ 387 (396)
T TIGR00882 308 LEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLF 387 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHH
Confidence 3222222222222222223345567888899999988877 567789999999999999999877777777766666555
Q ss_pred HHHhh
Q 015075 389 IASSL 393 (413)
Q Consensus 389 ~~~~~ 393 (413)
.+...
T Consensus 388 ~~~~~ 392 (396)
T TIGR00882 388 TLISV 392 (396)
T ss_pred HHHHH
Confidence 54443
No 84
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.85 E-value=3.6e-20 Score=164.52 Aligned_cols=129 Identities=20% Similarity=0.249 Sum_probs=106.4
Q ss_pred cccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccchhHHHHHHHhhccCCCcchHHHHHH
Q 015075 3 LGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGVPVFLAYFLEFVPVSHRGRWMVALS 82 (413)
Q Consensus 3 ~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~~~~~~~~~E~~p~~~Rg~~~~~~~ 82 (413)
+.+..||-++||+|||+++.++++..++...+.+++.||..++..|++.|+.-|.....-++++|..++++|+..++..+
T Consensus 83 ~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgnl~v~rAiisdV~sek~r~l~ms~v~ 162 (451)
T KOG2615|consen 83 ISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGNLSVIRAIISDVVSEKYRPLGMSLVG 162 (451)
T ss_pred HhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCchHHHHHHHHhhcChhhccceeeeee
Confidence 56788999999999999999999999999999999999977777799999999888888899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhc---CCC--hHH-HHHHhhHHHHH-HHHHhhcCCCCch
Q 015075 83 AFWTAGTIFEASLAWVVMT---RLN--WRW-LLAFSSVPSFA-LLLFYGLAPESPR 131 (413)
Q Consensus 83 ~~~~~G~~~~~~l~~~l~~---~~~--Wr~-~f~~~~i~~~~-~~~~~~~~pEsp~ 131 (413)
..+++|.++||.+++++.+ ..| |-. +.+...+.... .....+++|||-+
T Consensus 163 ~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpETL~ 218 (451)
T KOG2615|consen 163 TAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPETLP 218 (451)
T ss_pred hhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCcccc
Confidence 9999999999999999876 222 111 12233333333 4456688999943
No 85
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.85 E-value=2.4e-18 Score=163.07 Aligned_cols=310 Identities=12% Similarity=0.027 Sum_probs=172.1
Q ss_pred ccccchhhHhhhhcCChH----HHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcch
Q 015075 2 LLGAYSWGIISDNYGRRK----SFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGR 76 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~----~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~ 76 (413)
+++++++|++.||+|||+ .+.+..... .......+++++.+++.|++.|++.+.. +...++..++ .++|++
T Consensus 53 ~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~ 128 (382)
T PRK11128 53 FLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAFWFGAHSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGL 128 (382)
T ss_pred HhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHHHHhcccHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccC
Confidence 357888999999999943 232222221 2233445688999999999999987654 5555566665 456788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHHHHHhhcCCCCchHHhhccChHHHHHHHHHHHHHcCCC
Q 015075 77 WMVALSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFALLLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTK 156 (413)
Q Consensus 77 ~~~~~~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~~~~~~~~pEsp~~l~~~~~~~~a~~~~~~~~~~~~~~ 156 (413)
..+......++|..++|++++.+.+++|||..|+..++..++..+...+.||.++ +++
T Consensus 129 a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~----~~~------------------ 186 (382)
T PRK11128 129 DYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGVASMLLGQLLRPTIMP----QGE------------------ 186 (382)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHccCCCCC----ccc------------------
Confidence 8888888889999999999999999999999998877654444333334454321 000
Q ss_pred CCCCccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhccch-hhhHHHHHHHHHHHHHHHhhhHHhhhhh
Q 015075 157 LPPGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRK-LIRTTLLLWVLFFANVFSYYGAVLLTSK 235 (413)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (413)
+ ++ +.+ +...+++..+++| .+.......+..... ..++. +....
T Consensus 187 --------~---~~-~~~--------------------~~~~~~~~i~~~~~~~~~~~~~~l~~~~~-~~~~~--~~~~~ 231 (382)
T PRK11128 187 --------S---RQ-QES--------------------AGWPAWKALLKEPTVWRFLLCVSLLQGSH-AAYYG--FSAIY 231 (382)
T ss_pred --------c---cc-ccc--------------------cccchHHHHHcChhHHHHHHHHHHHHHHh-HhHHH--HHHHH
Confidence 0 00 000 0001122222222 221111111111111 11111 11111
Q ss_pred ccCCCCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHHHHHH
Q 015075 236 LSSGDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVL 315 (413)
Q Consensus 236 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (413)
+. ..+.+....+ ....+..+..++..++.+++.||+|+|+.+..+.+...+....+...++.+.....
T Consensus 232 ~~---------~~g~s~~~~g---~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (382)
T PRK11128 232 WQ---------AAGYSASTIG---YLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVI 299 (382)
T ss_pred HH---------HCCCCHhHHH---HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHH
Confidence 11 0111111111 12224455667778889999999999998877766655544433333333322222
Q ss_pred HHHHHHHhhhhhhhhheecccccccchhhhHHHHHHhhh-hhhHhHHHHHHHHHhhccchhHHHHHHHHHHH
Q 015075 316 LFGVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLG-KVGGMVCPLVAVGLVTSCHLRLAVILFEVVFV 386 (413)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~-~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~ 386 (413)
.+...++.....+....+..+. |++.+++..++.+... .+|..++|.+.|.+.+..+. ..++..+++.+
T Consensus 300 ~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~ 369 (382)
T PRK11128 300 QILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVAL 369 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHH
Confidence 2222222222334445556665 5555788888887554 45668999999999887764 33444444433
No 86
>PTZ00207 hypothetical protein; Provisional
Probab=99.82 E-value=4.1e-18 Score=165.85 Aligned_cols=141 Identities=16% Similarity=0.146 Sum_probs=109.3
Q ss_pred ccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhc------ccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcch
Q 015075 4 GAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFS------PNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGR 76 (413)
Q Consensus 4 G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a------~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~ 76 (413)
++++.|+++||+|||+++.++.++++++.++++++ ++++.+++.|+++|+|.+.. +.....+.+|+| ++||+
T Consensus 77 ~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~ 155 (591)
T PTZ00207 77 FLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGA 155 (591)
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHH
Confidence 45578999999999999999999999999999997 68999999999999998764 556677889996 78999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHHHH---HhhcCCCCchHHhhccChHHHHHHH
Q 015075 77 WMVALSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFALLL---FYGLAPESPRYLCAKARTVDAHRIL 146 (413)
Q Consensus 77 ~~~~~~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~~~---~~~~~pEsp~~l~~~~~~~~a~~~~ 146 (413)
+.++...+..+|..+.+.+...+.. .+|++.|++.++.++++.+ .....||+|++..++++.+++++..
T Consensus 156 a~Gi~~~~~gLGsaI~~~l~~~l~~-~~~~~~fl~l~vl~~vv~ll~~~~vr~p~~~~~~~~~~~~~~~~~~~ 227 (591)
T PTZ00207 156 VVAIMKTFTGLGSAILGSIQLAFFS-DNTSAYFFFLMSFALVVGILAIVFMRLPPFHLTGYQEKHLDEEEKAQ 227 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHhheeCCcchhhcccccCCCHHHHHH
Confidence 9999999999999865544444333 4788888877777655422 2334577777765665555555543
No 87
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.82 E-value=6.4e-19 Score=163.99 Aligned_cols=128 Identities=13% Similarity=0.127 Sum_probs=110.6
Q ss_pred cccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccchhHHHHHHHhhccCCCcchHHHHHH
Q 015075 3 LGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGVPVFLAYFLEFVPVSHRGRWMVALS 82 (413)
Q Consensus 3 ~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~~~~~~~~~E~~p~~~Rg~~~~~~~ 82 (413)
+.+++.|+++||+|.|+++..+.+.|++.++++++++++..+.+.|++.|+++|+..+...++.+|+|+++|++++++..
T Consensus 77 l~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R~llGvaEA~~~A~~syI~~WfP~kER~ratsi~~ 156 (511)
T TIGR00806 77 AVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQLMEVFYSVTMAARIAYSSYIFSLVPPSRYQRAAAYSR 156 (511)
T ss_pred HHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
Confidence 45778899999999999999999999999999999999999999999999999986676789999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCChHHHHHHhhH---HHHHHHHHhhcCCCCch
Q 015075 83 AFWTAGTIFEASLAWVVMTRLNWRWLLAFSSV---PSFALLLFYGLAPESPR 131 (413)
Q Consensus 83 ~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i---~~~~~~~~~~~~pEsp~ 131 (413)
.+..+|.+++++++.. ...+|||+.+-+.-+ -..+.+++-+++|.-++
T Consensus 157 sg~~vG~~Ia~~L~ql-l~s~gWr~y~~Ln~Isl~s~~~a~~~a~~LP~~~~ 207 (511)
T TIGR00806 157 AAVLLGVFLSSVLGQL-LVTLGWISYSTLNIISLVFMTFSVFLALFLKRPKR 207 (511)
T ss_pred HHHHHHHHHHHHHHHH-HHhcCchhHHHHHHHHHHHHHHHHHHHHhCCCCch
Confidence 9999999999999988 557899997654422 22344666677884444
No 88
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.82 E-value=7.6e-18 Score=163.59 Aligned_cols=111 Identities=14% Similarity=0.148 Sum_probs=98.3
Q ss_pred cchhhHhhhh-cCChHHHHHHHHHHHHHHHHHhhcccHHH-HHHHHHHhhhcccch-hHHHHHHHhhccCCC--cchHHH
Q 015075 5 AYSWGIISDN-YGRRKSFLGIAMVTSVAGLLSSFSPNYVS-LVIFRCFVGVGLGGV-PVFLAYFLEFVPVSH--RGRWMV 79 (413)
Q Consensus 5 ~~~~g~l~Dr-~Grr~~~~~~~~l~~~~~~~~~~a~~~~~-l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~--Rg~~~~ 79 (413)
.++.|+++|| +|||+++..+.+++.++.++++++++... ++++|+++|+|.|.. +...+++.|.+|+++ |++..+
T Consensus 67 ~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~ 146 (489)
T PRK10207 67 ISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFT 146 (489)
T ss_pred HhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchh
Confidence 4578999999 99999999999999999999999887554 558999999999875 777789999999884 577889
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHH
Q 015075 80 ALSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVP 115 (413)
Q Consensus 80 ~~~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~ 115 (413)
++..+.++|..+++.+++.+.++.|||+.|++.++.
T Consensus 147 ~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~ 182 (489)
T PRK10207 147 LFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAG 182 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHH
Confidence 999999999999999999999999999999986553
No 89
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.81 E-value=1.2e-17 Score=161.51 Aligned_cols=343 Identities=16% Similarity=0.187 Sum_probs=188.7
Q ss_pred cccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccchhHHHHHHHhhccCCCcchHHHHHH
Q 015075 3 LGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGVPVFLAYFLEFVPVSHRGRWMVALS 82 (413)
Q Consensus 3 ~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~~~~~~~~~E~~p~~~Rg~~~~~~~ 82 (413)
+++++.|.++|.||||..++.+.++..+|.++++.++|...++++-.+.|+|.|........++|..|.+.|+...++..
T Consensus 93 v~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~GvgaG~~~~~~~~isEl~p~k~R~~~~~~~~ 172 (599)
T PF06609_consen 93 VSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVGAGVQELAALAISELVPNKWRGLGLAIAS 172 (599)
T ss_pred HHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccchhhhHhHHHH
Confidence 35678899999999999999999999999999999999999999999999997765544555899999999987766665
Q ss_pred HHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHHHH--HhhcCCCCchHHhhccChHHHHHHHHHHHHHc-------
Q 015075 83 AFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFALLL--FYGLAPESPRYLCAKARTVDAHRILEKMAFVN------- 153 (413)
Q Consensus 83 ~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~~~--~~~~~pEsp~~l~~~~~~~~a~~~~~~~~~~~------- 153 (413)
.........++.++..+..+.+|||.|++..+...+.++ ..+..|.+ +-..+++....++.++|++.+.
T Consensus 173 ~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~~fY~PP~--~~~~~~~~~s~~~~l~~lD~IG~~L~~~G 250 (599)
T PF06609_consen 173 IPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLIFFFYFPPP--RAQLHGRKLSKREQLKELDWIGIFLFIAG 250 (599)
T ss_pred HHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHhCCCc--hhhhccccCcHHHHHHHhhHHHHHHHHHH
Confidence 554444445666666666677999999988776544322 22333433 2222222222223344444432
Q ss_pred -----------CC-CCCCCccccchhhhhhhhccccccccccchhhhcchh---hccccchhhhhccchhhhHHHHHHHH
Q 015075 154 -----------QT-KLPPGILVSDKAIKENEESNLLRDTHMLSMTRKITDK---LKSGFSSFFMLFSRKLIRTTLLLWVL 218 (413)
Q Consensus 154 -----------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (413)
+. ..+.+........-.-- . .-.-....|. .|.++...+.+..+|. .....+.
T Consensus 251 l~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~--~-------~Lv~F~~wE~~~~~~~Pl~P~~Lf~~~r~---~~~~lvi 318 (599)
T PF06609_consen 251 LALFLLGLSWGGYPYYPWKSAHVIAPLVIGF--V-------LLVAFVVWEWFGAPKDPLFPHRLFKDRRG---FAALLVI 318 (599)
T ss_pred HHHHHHHHhccCCCCCCCCCccchhhHHHHH--H-------HHHHHHHhhhhccCCCCcCCHHHhccchH---HHHHHHH
Confidence 00 01110000000000000 0 0000000111 1122222222222221 2222223
Q ss_pred HHHHHHHhhhH-HhhhhhccCCCCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhChh-HHHHHHHHHH
Q 015075 219 FFANVFSYYGA-VLLTSKLSSGDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRK-LSMVLMFVSA 296 (413)
Q Consensus 219 ~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr-~~~~~~~~~~ 296 (413)
.+...+.||.. .+++++... .+..+..............+++...|.++.|.+..|++|- ..++.+.+..
T Consensus 319 ~fi~G~~~~s~~~l~p~~~~~--------vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ 390 (599)
T PF06609_consen 319 SFISGMNFFSVNILWPQQVVN--------VFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLM 390 (599)
T ss_pred HHHHHHHHHHHHHHHHHHHhh--------hccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHH
Confidence 33333344443 344433211 0111110000111122334555667888888999888763 4444454444
Q ss_pred HHHHHHHHh--cchhHHHHHHHHHHHHHhhhhhhhhheecccccccchhhhHHHHHHhhhhhhHhHHHHHHHH
Q 015075 297 CIFLLPLVF--HQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVG 367 (413)
Q Consensus 297 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~ 367 (413)
..++.++.. .++......+.+...++..+...+..+.+.-..|++.-+++.|+..++..+||.++.-+..-
T Consensus 391 ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~ 463 (599)
T PF06609_consen 391 TAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYNA 463 (599)
T ss_pred HHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 333333332 22322233444444455555555667777788999999999999999999988777655443
No 90
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.81 E-value=2.6e-17 Score=159.82 Aligned_cols=117 Identities=13% Similarity=0.033 Sum_probs=104.8
Q ss_pred cccchhhHhhhh-cCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCC---cchH
Q 015075 3 LGAYSWGIISDN-YGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSH---RGRW 77 (413)
Q Consensus 3 ~G~~~~g~l~Dr-~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~---Rg~~ 77 (413)
++++++|+++|| +|||+++..+.++++++.++.++++++..+++.|++.|+|.|.. +...++++|++|+++ |++.
T Consensus 63 ~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~ 142 (475)
T TIGR00924 63 LLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGG 142 (475)
T ss_pred HHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccce
Confidence 578889999999 89999999999999999999999999999999999999999875 777789999999865 8889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHH
Q 015075 78 MVALSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFAL 119 (413)
Q Consensus 78 ~~~~~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~ 119 (413)
.+++..+.++|..+++.+++.+.++.|||+.|.+.++..++.
T Consensus 143 ~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~ 184 (475)
T TIGR00924 143 FTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIG 184 (475)
T ss_pred ehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHH
Confidence 999999999999999999999988889999999877544433
No 91
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.81 E-value=2.3e-19 Score=160.36 Aligned_cols=125 Identities=18% Similarity=0.162 Sum_probs=113.0
Q ss_pred cccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCC-CcchHHHH
Q 015075 3 LGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVS-HRGRWMVA 80 (413)
Q Consensus 3 ~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~-~Rg~~~~~ 80 (413)
+-..+.|++.||+|+|..++++++++..++++.++..+|+++++.|.+||+|.+.. ....+++++-+|.+ +||+++|+
T Consensus 121 lvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsglamlAd~f~~d~er~~vmGi 200 (464)
T KOG3764|consen 121 LVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSGLAMLADVFPEDNERGSVMGI 200 (464)
T ss_pred HhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhhHHHHHHHcccchhhhHHHHH
Confidence 44678899999999999999999999999999999999999999999999998875 56678999999987 58999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHHHHHhhcCC
Q 015075 81 LSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFALLLFYGLAP 127 (413)
Q Consensus 81 ~~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~~~~~~~~p 127 (413)
...+.++|.++||+.++.+.+..|.+..|++.++..++...+.+++-
T Consensus 201 algfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi 247 (464)
T KOG3764|consen 201 ALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVI 247 (464)
T ss_pred HHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHhee
Confidence 99999999999999999999999999999999998887766655543
No 92
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.81 E-value=2.4e-17 Score=159.92 Aligned_cols=326 Identities=16% Similarity=0.151 Sum_probs=206.7
Q ss_pred cccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhc-----ccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcch
Q 015075 3 LGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFS-----PNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGR 76 (413)
Q Consensus 3 ~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a-----~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~ 76 (413)
+-+++.|.++||+.||++++.+.++..+..++.++. .+.+.+++.-++.|++.+.. |.-.+.+-|..|+++..+
T Consensus 60 Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~ 139 (524)
T PF05977_consen 60 LLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPA 139 (524)
T ss_pred HHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHH
Confidence 456788999999999999999998876655444332 46888999999999998765 777889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHHHHHhhcCCCCchHHhhccChHHHHHHHHHHHHHcCCC
Q 015075 77 WMVALSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFALLLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTK 156 (413)
Q Consensus 77 ~~~~~~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~~~~~~~~pEsp~~l~~~~~~~~a~~~~~~~~~~~~~~ 156 (413)
++++.+...++..++||.+++.+....|-.+.|.+.++--++........+..++ + +..+.++..
T Consensus 140 A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~~~~~~----~-~~~~~e~~~---------- 204 (524)
T PF05977_consen 140 ANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRWKPPPP----P-SSLPRERFF---------- 204 (524)
T ss_pred HHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccc----c-cccchhhhh----------
Confidence 9999999999999999999999988888888888877644443333333222110 0 000000000
Q ss_pred CCCCccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhccchhhhHHHHHHHHHHHHHHHhhhHHhhhhhc
Q 015075 157 LPPGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKL 236 (413)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 236 (413)
+..+ +.++.....+..+..+.....+......++. ++ +.+
T Consensus 205 ----------------------------------~~l~---~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~a--Ll-Pl~ 244 (524)
T PF05977_consen 205 ----------------------------------SALR---EGLRYVRSSPPLRSVLLRSFLFNLFASAVWA--LL-PLF 244 (524)
T ss_pred ----------------------------------hhHH---HHHHHHhcchHHHHHHHHHHHHHHhhhHHHH--hh-hHH
Confidence 0001 1222233333333332222211111111111 11 111
Q ss_pred cCCCCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHHHHHHH
Q 015075 237 SSGDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLL 316 (413)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (413)
. .+.++. ............+++.+.|.++.+.+.+|+++++.+..+.+...+.++.+.+..+.+.....+
T Consensus 245 a-------~~~l~~---~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l 314 (524)
T PF05977_consen 245 A-------RDVLGG---GASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIAL 314 (524)
T ss_pred H-------HHHhCC---cHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 0 001111 112222334455666777888888888888877777777766666666555555555444444
Q ss_pred HHHHHHhhhhhhhhheecccccccchhhhHHHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHhh
Q 015075 317 FGVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSL 393 (413)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (413)
+..+++.........+...+..|++.||...++..++...+..++..+.|.+.+..+...++.+.+++.+++.++..
T Consensus 315 ~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~ 391 (524)
T PF05977_consen 315 FLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIAL 391 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 44444444444556677889999999999999999998888888899999888888777666665555555544444
No 93
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.79 E-value=4.6e-18 Score=164.12 Aligned_cols=367 Identities=17% Similarity=0.181 Sum_probs=207.8
Q ss_pred cccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHH-HHHhhhcccch-hHHHHHHHhhccCCCcchHHHH
Q 015075 3 LGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIF-RCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVA 80 (413)
Q Consensus 3 ~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~-R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~ 80 (413)
+.+++.+.+.||+|.|++.+.+.++.+++.++.+|+++++.+++. =++.|+|.|.. ..+...+..++ +++|+.++|+
T Consensus 96 ~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF-~kkR~lA~Gi 174 (509)
T KOG2504|consen 96 LAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYF-EKKRALATGI 174 (509)
T ss_pred HhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhhhhhHh-HHHHHHHHhh
Confidence 457788999999999999999999999999999999999887664 47889998865 34445555544 6889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHHHHHhhc-CCCCchHHhhccChHHHHHHHHHHHHHcCCCCCC
Q 015075 81 LSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFALLLFYGL-APESPRYLCAKARTVDAHRILEKMAFVNQTKLPP 159 (413)
Q Consensus 81 ~~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~~~~~~~-~pEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~ 159 (413)
...+..+|.++-|++.-.+.+..|||+.+++.+.+.+-.+..-.. -|.+++-. .+.++..+. .+.+.+.
T Consensus 175 a~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~---~~~~~~~~~-------~~~~~~~ 244 (509)
T KOG2504|consen 175 AVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRPLSPPKK---PNEEKDLRN-------SAASVES 244 (509)
T ss_pred hhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCCCCcCCC---chhhhhhcc-------ccccccc
Confidence 999999999999999999999999999998887777554443333 33333211 011111000 0000000
Q ss_pred Cccccchhhhhhhhccc---cccccccch----hhhcchhhccccchhhhhccchhhhHHHHHHHHHHHHHHHhhhHHhh
Q 015075 160 GILVSDKAIKENEESNL---LRDTHMLSM----TRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLL 232 (413)
Q Consensus 160 ~~~~~~~~~~~~~~~~~---~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (413)
.....+...+.++.... .......+. .....++.....-++..+..+. .+...+......+.++.....
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ll~~~~----fl~~~~~~~~~~~g~~~p~~~ 320 (509)
T KOG2504|consen 245 TPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRNSPLQAFLSMLDLSLLKDPK----FLLLALSNLFAYLGFNVPFVY 320 (509)
T ss_pred cccccccccccCCCCCCcccccchhhhhhCCccccccchhhhhhhhhHHHHcCch----HHHHHHHHHHHHHHHHHHHHH
Confidence 00000000000000000 000000000 0000000000000111122221 122222223333444433333
Q ss_pred hhhccCCCCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhC--hhHHHHHHHHHHHHHHHHHHhcchhH
Q 015075 233 TSKLSSGDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIG--RKLSMVLMFVSACIFLLPLVFHQSAV 310 (413)
Q Consensus 233 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g--rr~~~~~~~~~~~~~~~~~~~~~~~~ 310 (413)
.+..... .+.+.. .......+.++..+.|.++.|++.|+-. ++.....+.+++++......+.++..
T Consensus 321 l~~~~~~--------~g~~~~---~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~~~ 389 (509)
T KOG2504|consen 321 LPSYAKS--------LGLSSN---DAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPFATTYV 389 (509)
T ss_pred HHHHHhh--------cCCChh---hhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhccHH
Confidence 3222111 111111 1222344667778899999999999987 34444555555555443333333332
Q ss_pred HHHHHHHHHHHHhhhhhhhhheecccccccchhhhHHHHHHhhhhhhHhHHHHHHHHHhhccchh-HHHHHHHHHHHHHH
Q 015075 311 VTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLR-LAVILFEVVFVLAI 389 (413)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~-~~~~~~~~~~~~~~ 389 (413)
.........+++..........+..|+.+.+.-+.+.|+...+..++..++|.+.+.+.|.++.+ ..+...+++.+++.
T Consensus 390 ~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~ 469 (509)
T KOG2504|consen 390 GLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSA 469 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHH
Confidence 22222222233333344445567889999999999999999999999999999999888887744 44555566666665
Q ss_pred HHhhcc
Q 015075 390 ASSLLF 395 (413)
Q Consensus 390 ~~~~~~ 395 (413)
+..++.
T Consensus 470 ~~~~~~ 475 (509)
T KOG2504|consen 470 VLLLIL 475 (509)
T ss_pred HHHHHh
Confidence 555544
No 94
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.78 E-value=8.7e-17 Score=157.01 Aligned_cols=113 Identities=14% Similarity=0.104 Sum_probs=95.9
Q ss_pred chhhHhhhh-cCChHHHHHHHHHHHHHHHHHhhcc-cHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCC--cchHHHH
Q 015075 6 YSWGIISDN-YGRRKSFLGIAMVTSVAGLLSSFSP-NYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSH--RGRWMVA 80 (413)
Q Consensus 6 ~~~g~l~Dr-~Grr~~~~~~~~l~~~~~~~~~~a~-~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~--Rg~~~~~ 80 (413)
+++|+++|| +|||+++..+.+++.++..++++++ +...+++.|+++|++.|.. +...+++.|++|+++ |+...++
T Consensus 75 ~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~ 154 (500)
T PRK09584 75 AIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTM 154 (500)
T ss_pred HHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchH
Confidence 578999999 5999999999999999999998875 4667778999999998865 666688999998754 4557788
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHH
Q 015075 81 LSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFA 118 (413)
Q Consensus 81 ~~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~ 118 (413)
+..+.++|..++|.+++.+.++.|||+.|.+.++..++
T Consensus 155 ~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i 192 (500)
T PRK09584 155 YYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLI 192 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHH
Confidence 88999999999999999999989999999987764433
No 95
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.77 E-value=1.8e-17 Score=165.43 Aligned_cols=127 Identities=12% Similarity=0.151 Sum_probs=107.8
Q ss_pred cccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcc-------------------------------------------
Q 015075 3 LGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSP------------------------------------------- 39 (413)
Q Consensus 3 ~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~------------------------------------------- 39 (413)
+++++.|+++||+|||+.+.++.+++++++++.++.+
T Consensus 83 ~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~ 162 (633)
T TIGR00805 83 LLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSEC 162 (633)
T ss_pred HHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCccccccccccccccccccccccCCCCCCcccccccccc
Confidence 5678899999999999999999999999999987752
Q ss_pred --------cHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcCC-------
Q 015075 40 --------NYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTRL------- 103 (413)
Q Consensus 40 --------~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~l~~~~------- 103 (413)
.+..++++|+++|+|.+.. +...+|+.|++|+++|++..+++..+..+|..+|+++++.+.+.+
T Consensus 163 ~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~ 242 (633)
T TIGR00805 163 QKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVN 242 (633)
T ss_pred ccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCC
Confidence 2567889999999999875 677899999999999999999999999999999999998876532
Q ss_pred ---------------ChHHHHHHhhHHHHHHHHHhhcCCCC
Q 015075 104 ---------------NWRWLLAFSSVPSFALLLFYGLAPES 129 (413)
Q Consensus 104 ---------------~Wr~~f~~~~i~~~~~~~~~~~~pEs 129 (413)
+||..|++.+++.++..+.++++||+
T Consensus 243 ~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~~p~~ 283 (633)
T TIGR00805 243 TEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFFFPKA 283 (633)
T ss_pred CCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhCccc
Confidence 27777888888777765556667765
No 96
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.76 E-value=1.2e-15 Score=144.97 Aligned_cols=311 Identities=15% Similarity=-0.026 Sum_probs=164.3
Q ss_pred hHhhhhcCChHHHHHHHHH-HHHHHHHHh---hccc-HHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHHHHHH
Q 015075 9 GIISDNYGRRKSFLGIAMV-TSVAGLLSS---FSPN-YVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALS 82 (413)
Q Consensus 9 g~l~Dr~Grr~~~~~~~~l-~~~~~~~~~---~a~~-~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~ 82 (413)
++..||+||||..++...+ ........+ ...+ ..+++..-++.++..+.. +..-.+..|..++++|+...+...
T Consensus 60 ~~~~~~~g~r~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~ 139 (390)
T TIGR02718 60 NWWSWRLGRRRSWVLPMQCLVSACLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQI 139 (390)
T ss_pred ccccccCCcchhHHHHHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHH
Confidence 4467778999987555533 222222222 2222 233344444444443333 445567789999999998888888
Q ss_pred HHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHHHHHhhcCCCCchHHhhccChHHHHHHHHHHHHHcCCCCCCCcc
Q 015075 83 AFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFALLLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGIL 162 (413)
Q Consensus 83 ~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~~~~~~~~pEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 162 (413)
.+..+|.++++.+.+.+.+..|||..|++.++..++..+..++.+|+++. +.+.
T Consensus 140 ~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~~~~~~~~~---~~~~----------------------- 193 (390)
T TIGR02718 140 AGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCVLWLKDRAVA---SPEA----------------------- 193 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCCCcC---cccc-----------------------
Confidence 88899999999888888888999999999888776654444444443210 0000
Q ss_pred ccchhhhhhhhccccccccccchhhhcchhhccccchhhhhccchhhhHHHHHHHHHHHHHHHhhhHHhhhhhccCCCCc
Q 015075 163 VSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDNK 242 (413)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 242 (413)
+++ + ...++..++++..+...............++. +....+.
T Consensus 194 --~~~----~------------------------~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~l~----- 236 (390)
T TIGR02718 194 --PLA----R------------------------RASLFRFFRRPLAWSLLALALLSAMTAVSGFG--LSKLYLV----- 236 (390)
T ss_pred --chh----h------------------------HHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHH--HhhHHHH-----
Confidence 000 0 00111122222222222222221111111111 1111111
Q ss_pred cCccccccCCCCChhHHHHHHHH-HhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHH-HHHHHhc-----chhHHHHHH
Q 015075 243 CGSKVLHADKSKDNSLYVDVFIA-SLAELPGLILSAIIVDKIGRKLSMVLMFVSACIF-LLPLVFH-----QSAVVTTVL 315 (413)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~-~~~~~~~-----~~~~~~~~~ 315 (413)
..+.+....+ ...... ....+.+.++.|++.||+|+|+....+.+..... +...... .........
T Consensus 237 ----~~G~s~~~ig---~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (390)
T TIGR02718 237 ----DAGWPLEWIG---RLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSC 309 (390)
T ss_pred ----hcCCCHHHHH---HHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHH
Confidence 0112111111 111122 2345667889999999999998877655443221 1111111 111111111
Q ss_pred HHHHHHHhhhhhhhhheeccccccc-chhhhHHHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHH
Q 015075 316 LFGVRMCVTGTITVATIYAPEIYPT-SARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAI 389 (413)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~e~~p~-~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~ 389 (413)
.....++.....+.......+..++ +.+++..++.+++.++++.++|.+.+.+.+..+....+...+++.+++.
T Consensus 310 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~ 384 (390)
T TIGR02718 310 SAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAI 384 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHH
Confidence 1111111222223344454555655 8899999999999999999999999999887776555655555555443
No 97
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.76 E-value=5.2e-16 Score=148.21 Aligned_cols=347 Identities=14% Similarity=0.090 Sum_probs=190.7
Q ss_pred ccccchhhHhhh----hcCChHHHHHH-HHHHHHHHHHHhhcccHHHHHH------------HHHHhhh-----cccch-
Q 015075 2 LLGAYSWGIISD----NYGRRKSFLGI-AMVTSVAGLLSSFSPNYVSLVI------------FRCFVGV-----GLGGV- 58 (413)
Q Consensus 2 ~~G~~~~g~l~D----r~Grr~~~~~~-~~l~~~~~~~~~~a~~~~~l~~------------~R~l~G~-----~~g~~- 58 (413)
++.+++.|+++| |+|||+.++.. .+...++.++.++++++..++. .+++.|+ +....
T Consensus 53 ~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~ 132 (477)
T TIGR01301 53 LLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQ 132 (477)
T ss_pred HHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHH
Confidence 356788999999 59999999876 5555566677778777542221 3444443 44433
Q ss_pred hHHHHHHHhhccCCCc--chHHHHHHHHHHHHHHHHHHHHHHH--hcC-------------CChHHHHHHhhHHHHHH-H
Q 015075 59 PVFLAYFLEFVPVSHR--GRWMVALSAFWTAGTIFEASLAWVV--MTR-------------LNWRWLLAFSSVPSFAL-L 120 (413)
Q Consensus 59 ~~~~~~~~E~~p~~~R--g~~~~~~~~~~~~G~~~~~~l~~~l--~~~-------------~~Wr~~f~~~~i~~~~~-~ 120 (413)
+...+++.|.+|+++| +.+.++.+.+.++|.++++.+++.. ... .+-|+.|++.++..++. .
T Consensus 133 ~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l 212 (477)
T TIGR01301 133 GPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTY 212 (477)
T ss_pred HHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHH
Confidence 4556789999999865 6788999999999999999988764 111 16788999887766654 4
Q ss_pred HHhhcCCCCchHHhhccChHHHHHHHHHHHHHcCCCCCCCccccchhhhhhhhccccccccccchhhhcchhhccccchh
Q 015075 121 LFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSF 200 (413)
Q Consensus 121 ~~~~~~pEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (413)
+..+..+|.|... .++.++ ++ .+++++.+ . + ...++ -+
T Consensus 213 ~t~~~v~E~~~~~--~~~~~~-----~~-------------------~~~~~~~~---~----~------~~~~~---i~ 250 (477)
T TIGR01301 213 IALSAVKENPLIG--SDDFIN-----SE-------------------AAPPSKHG---E----E------AFFGE---LF 250 (477)
T ss_pred HHeeeeeccCCCc--cccchh-----hh-------------------cccccccc---h----h------hhHHH---HH
Confidence 4556788876311 000000 00 00000000 0 0 00000 11
Q ss_pred hhhcc-chhhhHHHHHHHHHHHHHHHhhhHHhh-hhhccCCCCccCccccccCCCC-----Ch---hHHHHHHHHHhhhh
Q 015075 201 FMLFS-RKLIRTTLLLWVLFFANVFSYYGAVLL-TSKLSSGDNKCGSKVLHADKSK-----DN---SLYVDVFIASLAEL 270 (413)
Q Consensus 201 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~-----~~---~~~~~~~~~~~~~~ 270 (413)
+.+.+ |+..+. +....+.+.+.++...++ +++.. .+.++.++.. ++ .. ....+.++...
T Consensus 251 ~~~~~mP~~m~~---l~~vqffsW~a~f~~~~y~T~~vg-------~~v~~~~~~~~~~y~~gvr~G~-~~l~~~s~~~~ 319 (477)
T TIGR01301 251 GAFKYLPRPVWI---LLLVTCLNWIAWFPFILFDTDWMG-------REVYGGSVNQGAKYDDGVRAGA-FGLMLNSVVLG 319 (477)
T ss_pred HHHHHCCHHHHH---HHHHHHHHHHHHHHHHHhccHHHH-------HHHcCCCCcchhHHHHHHHHHH-HHHHHHHHHHH
Confidence 11111 222221 222222222222222221 11111 0112211111 11 00 11223333333
Q ss_pred hHHHHHHHHHHHhCh-hHHHHHHHHHHHHHHHHHHhcch---------------------hHHHHHHHHHHHHHhhhhhh
Q 015075 271 PGLILSAIIVDKIGR-KLSMVLMFVSACIFLLPLVFHQS---------------------AVVTTVLLFGVRMCVTGTIT 328 (413)
Q Consensus 271 ~g~~~~g~l~dr~gr-r~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~ 328 (413)
+..++..++.+|+|+ |.....+.++..+.+....+..+ .....+.+...+.......+
T Consensus 320 i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~s 399 (477)
T TIGR01301 320 ITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYS 399 (477)
T ss_pred HHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHH
Confidence 455566778889985 66666665555444443322110 12233333344455556778
Q ss_pred hhheeccccccc--chhhhHHHHHHhhhhhhHhHHHHHHHHHhhccch--hHHHHHHHHHHHHHHHHhhcccccccC
Q 015075 329 VATIYAPEIYPT--SARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHL--RLAVILFEVVFVLAIASSLLFPFETMG 401 (413)
Q Consensus 329 ~~~~~~~e~~p~--~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~et~~ 401 (413)
+++++.++..|. +..|.-.|+.|.+-.+..++.....+.+.+..+. ...+.+-++..+++.+...+++|.++.
T Consensus 400 iPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~~~~ 476 (477)
T TIGR01301 400 IPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPRPRV 476 (477)
T ss_pred HhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 899999999995 4558889999998888777777666654444432 234555567777888888888887764
No 98
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.72 E-value=8.1e-16 Score=148.97 Aligned_cols=318 Identities=12% Similarity=0.070 Sum_probs=174.4
Q ss_pred cchhhHhhhhcC-----ChHHHHHHHHHHH-HHHHHHhhcccHHHHH-HHHHHhhhcccch-hHHHHHHHhhccCCCcch
Q 015075 5 AYSWGIISDNYG-----RRKSFLGIAMVTS-VAGLLSSFSPNYVSLV-IFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGR 76 (413)
Q Consensus 5 ~~~~g~l~Dr~G-----rr~~~~~~~~l~~-~~~~~~~~a~~~~~l~-~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~ 76 (413)
.++||+++||++ ||+.++++.++.+ ++....+..++..... +++++.+++.+.. ...-.+..|..+ +++..
T Consensus 77 K~l~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~ 155 (468)
T TIGR00788 77 KPFAGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSA 155 (468)
T ss_pred HHHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCc
Confidence 356999999998 7887777777763 4434444445644444 4888999987765 566788899988 55544
Q ss_pred HHHHHHHH---HHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHHHHHhhcCCCCchHHhhccChHHHHHHHHHHHHHc
Q 015075 77 WMVALSAF---WTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFALLLFYGLAPESPRYLCAKARTVDAHRILEKMAFVN 153 (413)
Q Consensus 77 ~~~~~~~~---~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~~~~~~~~pEsp~~l~~~~~~~~a~~~~~~~~~~~ 153 (413)
..+..... ..+|.++++.+++.+.+..+||..|++.+...++..+...++||++.....+.+.++ .. +
T Consensus 156 ~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~~~~~~~E~~~~~~~~~~~~~--~~-------~ 226 (468)
T TIGR00788 156 GPSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQLFVSNLSKERRAFVRPRIGTYL--EM-------N 226 (468)
T ss_pred CCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHhcccccccccccccccc--hh-------h
Confidence 33333333 448999999999999888999999988877776666666777886421000000000 00 0
Q ss_pred CCCCCCCccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhccchhhhHHHHHHHHHHHHHHHhhhHHhhh
Q 015075 154 QTKLPPGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLT 233 (413)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (413)
........ .+..++.....+..++++.....++..+. + |.......
T Consensus 227 -----------~~~~~~~~-----------------~~~~~~~~~~l~~~l~~~~i~~~l~fifl---~---~~~~~~~~ 272 (468)
T TIGR00788 227 -----------MALLTLGV-----------------LANVKVQILGLRGAIQLLEIAKPLIFIFL---S---YANLPGAS 272 (468)
T ss_pred -----------hhhhhhhH-----------------HHHHHHHHHHHHHHHhcHHHHHHHHHHHH---H---HhhcCCCC
Confidence 00000000 00000000111111222222111111111 0 10000000
Q ss_pred hhccCCCCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHH-h----c--
Q 015075 234 SKLSSGDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLV-F----H-- 306 (413)
Q Consensus 234 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~-~----~-- 306 (413)
.... .......+++....+ ......+++.+++....+.+.+|++.|+.+..+.+...+...... . .
T Consensus 273 ~~~f----~~~~~~lG~s~~~~G---~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~ 345 (468)
T TIGR00788 273 GSVF----CATTQCLPGGPSFSG---MSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLA 345 (468)
T ss_pred ceeE----EEEcccCCCCcchhh---hHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccc
Confidence 0000 000011233333333 223345577788888888888999999888777666654332211 0 0
Q ss_pred ---chhHHHHHHHHHHHHHhhhhhhhhheecccccccchhhhHHHHHHhhhhhhHhHHHHHHHHHhhccc
Q 015075 307 ---QSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCH 373 (413)
Q Consensus 307 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~ 373 (413)
.+............+...........+..++.|++.+++..++.+++.++|..+++.+.+.+.+..+
T Consensus 346 ~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 346 FGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred cCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 1111111111122222222334457788999999999999999999999999999988887776654
No 99
>PRK09669 putative symporter YagG; Provisional
Probab=99.70 E-value=1e-14 Score=140.99 Aligned_cols=300 Identities=14% Similarity=0.099 Sum_probs=160.4
Q ss_pred cccchhhHhhhh----cCChHH-HHHHHHHHHHHHHHHhhccc------HHHHHHHHHHhhhcccch-hHHHHHHHhhc-
Q 015075 3 LGAYSWGIISDN----YGRRKS-FLGIAMVTSVAGLLSSFSPN------YVSLVIFRCFVGVGLGGV-PVFLAYFLEFV- 69 (413)
Q Consensus 3 ~G~~~~g~l~Dr----~Grr~~-~~~~~~l~~~~~~~~~~a~~------~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~- 69 (413)
+..++.|+++|| +|||+. ++.+.+..+++.++....|+ +..+++.-++.+.+.... ....++..|+.
T Consensus 60 i~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~ 139 (444)
T PRK09669 60 VTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIYACVTYILLSLVYTAINVPYCAMPGAITN 139 (444)
T ss_pred cccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcC
Confidence 467888999998 888555 55666777777666555553 345555666666544333 33447788988
Q ss_pred cCCCcchHHHHHHHHHHHHHHHHHHHHHHHhc-------CCChHHHHHHhhHHHHHHHHH-hhcCCCCchHHhhccChHH
Q 015075 70 PVSHRGRWMVALSAFWTAGTIFEASLAWVVMT-------RLNWRWLLAFSSVPSFALLLF-YGLAPESPRYLCAKARTVD 141 (413)
Q Consensus 70 p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~l~~-------~~~Wr~~f~~~~i~~~~~~~~-~~~~pEsp~~l~~~~~~~~ 141 (413)
++++|++..+.......+|..+++.+...+.. ..+|+..+.+.++..++..+. .+..+|.++-
T Consensus 140 ~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~~~~~~~~~e~~~~--------- 210 (444)
T PRK09669 140 DPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVLFFCCFFMTKERYTP--------- 210 (444)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHhCCeEEecCC---------
Confidence 55889998888888888887777655443321 347888887777666554333 3333332110
Q ss_pred HHHHHHHHHHHcCCCCCCCccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhccchhhhHHHHHHHHH-H
Q 015075 142 AHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLF-F 220 (413)
Q Consensus 142 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 220 (413)
+ ++ ++. +..+.++..++.+..+......+.. .
T Consensus 211 -----------------------~---~~-~~~--------------------~~~~~~~~~~~n~~~~~l~~~~~~~~~ 243 (444)
T PRK09669 211 -----------------------E---VD-NSS--------------------SVWKDLKLLLGNSQWRIMFIFNVVLLT 243 (444)
T ss_pred -----------------------C---Cc-CCC--------------------CHHHHHHHHhCCchHHHHHHHHHHHHH
Confidence 0 00 000 0001122222222222211111111 1
Q ss_pred HHHHHhhhHHhhhhhccCCCCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHH
Q 015075 221 ANVFSYYGAVLLTSKLSSGDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFL 300 (413)
Q Consensus 221 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~ 300 (413)
...... . ...++.. +.... .+.. ........+..+++.++.++++||+|+|+....+.+...+..
T Consensus 244 ~~~~~~-~---~~~y~~~---------~~~~~-~~~~-~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~ 308 (444)
T PRK09669 244 AVVTRG-G---ATLYYVN---------YVLLR-PDLA-TLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILS 308 (444)
T ss_pred HHHHHh-h---hhheeee---------eecCC-HHHH-HHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHH
Confidence 111000 0 0000100 00000 1111 111223334556778888999999999988776655443222
Q ss_pred H-HHHh-cchhHHHHHHHHHHHHHhhhhhhhhheecccccc-------cchhhhHHHHHHhhhhhhHhHHHHHHHHHhhc
Q 015075 301 L-PLVF-HQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYP-------TSARTTGFGVASSLGKVGGMVCPLVAVGLVTS 371 (413)
Q Consensus 301 ~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p-------~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~ 371 (413)
. .... .++............+......+..+.+.+|..+ .+..+...|+.+.+.++|..++|.+.+.+++.
T Consensus 309 ~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~ 388 (444)
T PRK09669 309 ALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAW 388 (444)
T ss_pred HHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 2222 2232222222333334444555677888888875 34556778888888999999999988877765
Q ss_pred cc
Q 015075 372 CH 373 (413)
Q Consensus 372 ~~ 373 (413)
.+
T Consensus 389 ~G 390 (444)
T PRK09669 389 VD 390 (444)
T ss_pred cC
Confidence 43
No 100
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.70 E-value=8.8e-14 Score=133.75 Aligned_cols=336 Identities=20% Similarity=0.250 Sum_probs=189.9
Q ss_pred cchhhHhhhhcCChHHHHHHH-HHHHHHHHHHhhc-ccHHH-HHHHHHHhhhcccch-hHHHHHHHhhccCCCc------
Q 015075 5 AYSWGIISDNYGRRKSFLGIA-MVTSVAGLLSSFS-PNYVS-LVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHR------ 74 (413)
Q Consensus 5 ~~~~g~l~Dr~Grr~~~~~~~-~l~~~~~~~~~~a-~~~~~-l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~R------ 74 (413)
.++.|.++|+-|+||.++... ++..+++.+..+. ++-+. ..+.-++.-++.+.. ....+++-|..+++++
T Consensus 87 ~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna~LP~la~~~~~~~~~~~ 166 (477)
T PF11700_consen 87 APFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNAYLPDLARPEPRVRAARE 166 (477)
T ss_pred HHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCChhhhhhhh
Confidence 467799999999888765544 5555666666664 43333 233333333343332 3345788899999988
Q ss_pred --------------------chHHHHHHHHHHHHHHHHHHHHHHHhcC--------CChHHHHHHhhHHHHHH-HHHhhc
Q 015075 75 --------------------GRWMVALSAFWTAGTIFEASLAWVVMTR--------LNWRWLLAFSSVPSFAL-LLFYGL 125 (413)
Q Consensus 75 --------------------g~~~~~~~~~~~~G~~~~~~l~~~l~~~--------~~Wr~~f~~~~i~~~~~-~~~~~~ 125 (413)
++.++.-.....+|.++.-.+...+... .+-|..+.+.++--++. +...++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~~~~a~ww~vfsiP~~~~ 246 (477)
T PF11700_consen 167 PSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAFLIVALWWLVFSIPLFLW 246 (477)
T ss_pred hhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHHHHHHHHHHHHHHHHHHh
Confidence 9999988777788887766555544321 23477676666654443 556677
Q ss_pred CCCCchHHhhccChHHHHHHHHHHHHHcCCCCCCCccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhcc
Q 015075 126 APESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFS 205 (413)
Q Consensus 126 ~pEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (413)
+||.|+- ++.. +..+.++ ...+..+..++...+
T Consensus 247 ~~~~~~~---~~~~-~~~~~~~-------------------------------------------~g~~~l~~t~k~~~~ 279 (477)
T PF11700_consen 247 LPDRPGP---RPLP-SGSSYLR-------------------------------------------FGFKRLWRTFKEIRK 279 (477)
T ss_pred CCCCCCC---CCCC-cchhHHH-------------------------------------------HHHHHHHHHHHHHHh
Confidence 7877641 0000 0000000 000000111122211
Q ss_pred chhhhHHHHHHHHHH--HHHHHhhhHHhhhhhccCCCCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHh
Q 015075 206 RKLIRTTLLLWVLFF--ANVFSYYGAVLLTSKLSSGDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKI 283 (413)
Q Consensus 206 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~ 283 (413)
.|.....++.++.+. .+.+......+... .++++. .......++..+.+++|+++.|++.||+
T Consensus 280 ~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~------------~lg~s~---~~l~~~~l~~~i~a~~Ga~~~g~l~~r~ 344 (477)
T PF11700_consen 280 LRQLFLFLIAYFLYSDGVNTIISFAGIYATE------------VLGMST---TQLIVFGLVVQIVAIIGALLFGWLQDRF 344 (477)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------hcCcCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 122222233333221 11111111122111 122222 2233445667778899999999999999
Q ss_pred Chh--HHHHHHHHHHHH-HHHHHH-h------cchhHHHHHHHHHHHHHhhhhhhhhheecccccccchhhhHHHHHHhh
Q 015075 284 GRK--LSMVLMFVSACI-FLLPLV-F------HQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSL 353 (413)
Q Consensus 284 grr--~~~~~~~~~~~~-~~~~~~-~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~ 353 (413)
|-| +++..+.+...+ .+..+. + .++.+....+-...+++..+.++..-++.+|+.|+...+.-.|+....
T Consensus 345 g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~ 424 (477)
T PF11700_consen 345 GPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAIT 424 (477)
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHH
Confidence 988 555544433322 222222 0 223333333333445556667788889999999999999999999999
Q ss_pred hhhhHhHHHHHHHHHhhccch-hHHHHHHHHHHHHHHHHhhcccccccCcc
Q 015075 354 GKVGGMVCPLVAVGLVTSCHL-RLAVILFEVVFVLAIASSLLFPFETMGRE 403 (413)
Q Consensus 354 ~~~~~~~~p~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~et~~~~ 403 (413)
++..++++|.+.+.+.+.+++ ...+....++.+++. ..++..++.|+|+
T Consensus 425 gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl-~ll~~v~~~~g~~ 474 (477)
T PF11700_consen 425 GKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGL-ILLFFVDVEKGRE 474 (477)
T ss_pred HHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHH-HHHhhccchhhhh
Confidence 999999999999988888764 455555555555554 4445566666554
No 101
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.64 E-value=1.3e-13 Score=134.35 Aligned_cols=305 Identities=10% Similarity=0.033 Sum_probs=155.2
Q ss_pred cccchhhHhhh----hcCCh-HHHHHHHHHHHHHHHHHhhccc------HHHHHHHHHHhhhcccch-hHHHHHHHhhc-
Q 015075 3 LGAYSWGIISD----NYGRR-KSFLGIAMVTSVAGLLSSFSPN------YVSLVIFRCFVGVGLGGV-PVFLAYFLEFV- 69 (413)
Q Consensus 3 ~G~~~~g~l~D----r~Grr-~~~~~~~~l~~~~~~~~~~a~~------~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~- 69 (413)
+..+++|+++| |+||| +.+..+.+..+++..+.-..++ +..+++.-++.+++.... ....++..|..
T Consensus 57 i~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~ 136 (473)
T PRK10429 57 INDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTL 136 (473)
T ss_pred HhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCC
Confidence 45677899999 66994 5555666766766655544332 334445555555554433 33446778988
Q ss_pred cCCCcchHHHHHHHHHHHHHHHHHHHHHHHhc-------CCChHHHHHHhhHHHHHHH-HHhhcCCCCchHHhhccChHH
Q 015075 70 PVSHRGRWMVALSAFWTAGTIFEASLAWVVMT-------RLNWRWLLAFSSVPSFALL-LFYGLAPESPRYLCAKARTVD 141 (413)
Q Consensus 70 p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~l~~-------~~~Wr~~f~~~~i~~~~~~-~~~~~~pEsp~~l~~~~~~~~ 141 (413)
++++|.+..++-..+.++|..+.+.+...+.+ ..+|+....+.++..++.. ...+..+|.++. +
T Consensus 137 ~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~~~~---~----- 208 (473)
T PRK10429 137 DKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIITLRNVHEVYSS---D----- 208 (473)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHcCceecCCc---c-----
Confidence 58999999988666667775555444433211 2357777666666555433 333445554310 0
Q ss_pred HHHHHHHHHHHcCCCCCCCccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhccchhhhHHHHHHHHHHH
Q 015075 142 AHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFA 221 (413)
Q Consensus 142 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (413)
+.+.++ +++ .+..+.++.+++.|..+..+.. .+.
T Consensus 209 -----------------------~~~~~~-~~~-------------------~~~~~~~~~~~~n~~~~~ll~~---~~~ 242 (473)
T PRK10429 209 -----------------------NQVSAE-GSH-------------------LTLKDIVALIYKNDQLSCLLGM---ALA 242 (473)
T ss_pred -----------------------cccccc-ccC-------------------CCHHHHHHHHhcCHHHHHHHHH---HHH
Confidence 000000 000 0000112222222222211111 111
Q ss_pred HHHHhhhHHhhhhhccCCCCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHH
Q 015075 222 NVFSYYGAVLLTSKLSSGDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLL 301 (413)
Q Consensus 222 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~ 301 (413)
.....+.......++.. +.... .........+..+..+++.++.+++.||+|+|+.+..+.....+..+
T Consensus 243 ~~~~~~~~~~~~~y~~~---------y~~~~--~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~ 311 (473)
T PRK10429 243 YNIASNIINGFAIYYFT---------YVIGD--ADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCG 311 (473)
T ss_pred HHHHHHHHhhheeeEEE---------EECCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHH
Confidence 11111111111111110 00000 11111122234456677888899999999999988766554332222
Q ss_pred HHH---h--cchhHHHHHHHHHHHHHhhhhhhhhheecccccc-------cchhhhHHHHHHhhhhhhHhHHHHHHHHHh
Q 015075 302 PLV---F--HQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYP-------TSARTTGFGVASSLGKVGGMVCPLVAVGLV 369 (413)
Q Consensus 302 ~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p-------~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~ 369 (413)
.+. . ..+.+..........+.........+++.+|..+ .+..|...|....+.+++..+++.+.+.++
T Consensus 312 ~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l 391 (473)
T PRK10429 312 VLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVL 391 (473)
T ss_pred HHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 221 1 1222222222222233334455667788888855 455566778888888999999998888777
Q ss_pred hcc
Q 015075 370 TSC 372 (413)
Q Consensus 370 ~~~ 372 (413)
+..
T Consensus 392 ~~~ 394 (473)
T PRK10429 392 GLI 394 (473)
T ss_pred HHc
Confidence 543
No 102
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.62 E-value=7.2e-13 Score=119.88 Aligned_cols=314 Identities=14% Similarity=0.139 Sum_probs=193.0
Q ss_pred cccchhhHhhhhcCChHHHHHHHHHHHHHHHHHh---hcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHH
Q 015075 3 LGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSS---FSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWM 78 (413)
Q Consensus 3 ~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~---~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~ 78 (413)
++++..|++.+|+|+|+.++.++.++.++..+.. -..+|..++++-++.|.|.|.. ..+.+|+....|+++-.+.+
T Consensus 63 ~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rl 142 (422)
T COG0738 63 IMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRL 142 (422)
T ss_pred HHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHH
Confidence 5677889999999999999999999999999884 5567999999999999999975 67789999999998888889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcC-------------------CChHHHHHHhhHHHHHHHHHhh--cCCCCchHHhhcc
Q 015075 79 VALSAFWTAGTIFEASLAWVVMTR-------------------LNWRWLLAFSSVPSFALLLFYG--LAPESPRYLCAKA 137 (413)
Q Consensus 79 ~~~~~~~~~G~~~~~~l~~~l~~~-------------------~~Wr~~f~~~~i~~~~~~~~~~--~~pEsp~~l~~~~ 137 (413)
.+.|..+.+|.+++|+++..+... -.||+++...+...+++.+... ..||-+.
T Consensus 143 nl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~------ 216 (422)
T COG0738 143 NLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQV------ 216 (422)
T ss_pred HHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCc------
Confidence 999999999999999998876541 1366666655444333322221 1222110
Q ss_pred ChHHHHHHHHHHHHHcCCCCCCCccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhccchhhhHHHHHHH
Q 015075 138 RTVDAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWV 217 (413)
Q Consensus 138 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (413)
+.+++. +. ++ .....+++.|+.+...+..+
T Consensus 217 -------------------------------~~~~~~---~~--------------~~--~~~~~l~~~~~~~~gvl~~F 246 (422)
T COG0738 217 -------------------------------AAPSLG---AS--------------GS--AGLSSLFQNKHLRLGVLAIF 246 (422)
T ss_pred -------------------------------cccccc---cc--------------cc--chHHHHHhChHHHHHHHHHH
Confidence 000000 00 00 01222334444444444444
Q ss_pred HHHHHHHHhhhHHhhhhhccCCCCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHH
Q 015075 218 LFFANVFSYYGAVLLTSKLSSGDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSAC 297 (413)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~ 297 (413)
++......... ++.+.+.. .......+...+. ...-.+.++|.+++.++..|+...+.+....+...
T Consensus 247 lYVG~Eva~gs--fl~~y~~~---------~~g~~~~~aa~~~--s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~i 313 (422)
T COG0738 247 LYVGAEVAIGS--FLVSYLEE---------LLGLNEQQAAYYL--SFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAI 313 (422)
T ss_pred HHHhHHHHHHH--HHHHHHHh---------cCCccHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 44443333221 11111110 0000111122222 22233456788888888889887777766665555
Q ss_pred HHHHHHHhcchhHHHHHHHHHHHHHhhhhhhhhheecccccccchhhhHHHHHHhhhhhhHhHHHHHHHHHhhccchhHH
Q 015075 298 IFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLA 377 (413)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~ 377 (413)
..++......+ ...+..++..+++....++..+....+..| +.-+. .|..-.++-+||.+.|++.|.+.|..+....
T Consensus 314 ll~~~~~l~~g-~v~~~~l~~ig~F~simfPTIfslal~~l~-~~ts~-~s~~l~maivGGAiiP~l~G~i~d~~g~~~~ 390 (422)
T COG0738 314 LLLLAVALIGG-VVALYALFLIGLFNSIMFPTIFSLALKNLG-EHTSV-GSGLLVMAIVGGAIIPPLQGVIADMFGIQLT 390 (422)
T ss_pred HHHHHHHHhcC-hHHHHHHHHHHHHhHHHHHHHHHHHHhccC-ccccc-cceeeeeheecchHHHHHHHHHHHhhhhHHH
Confidence 54444444434 333444555566777778888888888888 33333 3444455678899999999999888766555
Q ss_pred HHHHHHHHHHH
Q 015075 378 VILFEVVFVLA 388 (413)
Q Consensus 378 ~~~~~~~~~~~ 388 (413)
+.....+|.+.
T Consensus 391 ~~~~pllc~ly 401 (422)
T COG0738 391 FLIVPLLCYLY 401 (422)
T ss_pred HHHHHHHHHHH
Confidence 44444444443
No 103
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.61 E-value=8.9e-13 Score=120.82 Aligned_cols=272 Identities=13% Similarity=0.115 Sum_probs=158.5
Q ss_pred hcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcC-------------
Q 015075 37 FSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTR------------- 102 (413)
Q Consensus 37 ~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~l~~~------------- 102 (413)
...+|..+++.-++.|.|.+.. +...+|+++..|++++.+.+++.+.++.+|.+++|.++..+...
T Consensus 6 ~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~ 85 (310)
T TIGR01272 6 SQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATAN 85 (310)
T ss_pred HhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhh
Confidence 4578999999999999999975 77889999999999999999999999999999999998876621
Q ss_pred ---CChHHHHHHhhHHHHHHHHHh--hcCCCCchHHhhccChHHHHHHHHHHHHHcCCCCCCCccccchhhhhhhhcccc
Q 015075 103 ---LNWRWLLAFSSVPSFALLLFY--GLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLL 177 (413)
Q Consensus 103 ---~~Wr~~f~~~~i~~~~~~~~~--~~~pEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (413)
.+||+++++.+...++..+.+ .-+||.++ +++ ++...++
T Consensus 86 ~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~----~~~------------------------------~~~~~~~-- 129 (310)
T TIGR01272 86 AEAAKVHTPYLLLAGALAVLAIIFAFLPLPELQE----ADV------------------------------ARVSSGD-- 129 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCc----ccc------------------------------ccccccc--
Confidence 479999885555443333332 23454311 000 0000000
Q ss_pred ccccccchhhhcchhhccccchhhhhccchhhhHHHHHHHHHHHHHHH--hhhHHhhhhhccCCCCccCccccccCCCCC
Q 015075 178 RDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFS--YYGAVLLTSKLSSGDNKCGSKVLHADKSKD 255 (413)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 255 (413)
.. + + +..++.+......+..+.+.....+ .+...++... +.++.+...
T Consensus 130 -~~-----------~-~------~~~~~~~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~----------~~~g~s~~~- 179 (310)
T TIGR01272 130 -TT-----------Q-K------TSAFQFTHLVLGALGIFVYVGAEVSAGSFLVNFLSDP----------HALGLPEDQ- 179 (310)
T ss_pred -cc-----------c-h------hhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------ccCCCCHHH-
Confidence 00 0 0 0011111111111111122211111 1111222110 001121111
Q ss_pred hhHHHHHHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhhhhhhhhheecc
Q 015075 256 NSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAP 335 (413)
Q Consensus 256 ~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (413)
.. ........+..+|.++++++.||+|+|+.+..+...+.+........+... ....+....++....++.......
T Consensus 180 a~--~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~-~~~~~~l~g~~~s~i~P~~~s~a~ 256 (310)
T TIGR01272 180 AA--HFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYV-AMWFVLALGLFNSIMFPTIFSLAL 256 (310)
T ss_pred HH--HHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHH-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 123334445678999999999999988877666655554443332222222 122333444555666777777788
Q ss_pred cccccchhhhHHHHHHhhhhhhHhHHHHHHHHHhhccchhHHHH
Q 015075 336 EIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVI 379 (413)
Q Consensus 336 e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~ 379 (413)
+.+|++ .+++.++. .++.+|+.+.|.+.+.+.|..+...+++
T Consensus 257 ~~~~~~-~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~ 298 (310)
T TIGR01272 257 NALGRH-TSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFA 298 (310)
T ss_pred hhhhhh-hhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHH
Confidence 888765 45666764 6788999999999998888777655554
No 104
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.61 E-value=1.9e-12 Score=122.22 Aligned_cols=330 Identities=16% Similarity=0.223 Sum_probs=175.4
Q ss_pred ccccchhhHhhhhcCC-hHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHHH
Q 015075 2 LLGAYSWGIISDNYGR-RKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMV 79 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Gr-r~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~ 79 (413)
+++++++|+++||.++ |+.+.+..++.++........++++.+++.-++..+..... |..-++..+....++ .--+
T Consensus 51 i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~~~~--~~YG 128 (400)
T PF03825_consen 51 IVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFSSSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLGDRG--KDYG 128 (400)
T ss_pred HHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHccHHHHHHHHHHHHccccc--CCCC
Confidence 4678899999999874 66666766777777777778889998888877777765543 544455555544221 1122
Q ss_pred HHHHHHHHHHHHHHHH-HHHHhcC---CChHHHHHHhhHHHHHHHHHhhcCCCCchHHhhccChHHHHHHHHHHHHHcCC
Q 015075 80 ALSAFWTAGTIFEASL-AWVVMTR---LNWRWLLAFSSVPSFALLLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQT 155 (413)
Q Consensus 80 ~~~~~~~~G~~~~~~l-~~~l~~~---~~Wr~~f~~~~i~~~~~~~~~~~~pEsp~~l~~~~~~~~a~~~~~~~~~~~~~ 155 (413)
-.-...++|-++++.. +..+... .+..+.+++.+...++.....+.+|+.|+- +...+
T Consensus 129 ~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ll~~~~l~lp~~~~~---~~~~~--------------- 190 (400)
T PF03825_consen 129 RIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYIAAILSLLLAGFALFLPKTPPK---RSAKE--------------- 190 (400)
T ss_pred cchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHHHHhCCCCccc---cccCC---------------
Confidence 3344444555544332 1222222 222334555555444444455667877620 00000
Q ss_pred CCCCCccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhccchhhhHHHHHHHHHHHHHHHh-hhHHhhhh
Q 015075 156 KLPPGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSY-YGAVLLTS 234 (413)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 234 (413)
+.++ +.....++.+.+|+...-.+...+........| |....+..
T Consensus 191 -------------~~~~---------------------~~~~~~~~llk~~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~ 236 (400)
T PF03825_consen 191 -------------SVKK---------------------LLGLDALKLLKNPRFLVFLLAAFLIGISHAAYYTFFSIYLQE 236 (400)
T ss_pred -------------Cccc---------------------ccchHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000 000001122223333322222222222222211 11122211
Q ss_pred hccCCCCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhc-chhHHHH
Q 015075 235 KLSSGDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFH-QSAVVTT 313 (413)
Q Consensus 235 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 313 (413)
. +. ...........+..+++++-....+++..|+|-|+++.++++...+=...+... ++.+...
T Consensus 237 -~------------gg--~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~~~~~~ 301 (400)
T PF03825_consen 237 -L------------GG--YSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDPWPFIV 301 (400)
T ss_pred -c------------cc--chhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHH
Confidence 1 00 001111122235666788888889999999999998888777765544343333 3333222
Q ss_pred HHHH----HHHHHhhhhhhhhheecccccccchhhhHHHHHHhhh-hhhHhHHHHHHHHHhhccchhHH------HHHHH
Q 015075 314 VLLF----GVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLG-KVGGMVCPLVAVGLVTSCHLRLA------VILFE 382 (413)
Q Consensus 314 ~~~~----~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~-~~~~~~~p~~~~~l~~~~~~~~~------~~~~~ 382 (413)
.... .-+............|..+..|++.|+++.++.+.+. .+|+.++..+.|.+.+..+.... +.+.+
T Consensus 302 ~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a 381 (400)
T PF03825_consen 302 ALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFA 381 (400)
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHH
Confidence 2211 1233333345566778999999999999999998875 68999999999999987654322 22233
Q ss_pred HHHHHHHHHhhccccccc
Q 015075 383 VVFVLAIASSLLFPFETM 400 (413)
Q Consensus 383 ~~~~~~~~~~~~~~~et~ 400 (413)
++.++..+...++-+|++
T Consensus 382 ~~~~~~~~~f~~~fk~~~ 399 (400)
T PF03825_consen 382 VMALVILVLFVILFKPKH 399 (400)
T ss_pred HHHHHHHHHHHhhccCCC
Confidence 333444444444444543
No 105
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.61 E-value=7.2e-14 Score=134.48 Aligned_cols=299 Identities=18% Similarity=0.212 Sum_probs=175.5
Q ss_pred ccchhhHhhh----hcCChHHHH-HHHHHHHHHHHHHhhc-c-------cHHHHHHHHHHhhhcccch-hHHHHHHHhhc
Q 015075 4 GAYSWGIISD----NYGRRKSFL-GIAMVTSVAGLLSSFS-P-------NYVSLVIFRCFVGVGLGGV-PVFLAYFLEFV 69 (413)
Q Consensus 4 G~~~~g~l~D----r~Grr~~~~-~~~~l~~~~~~~~~~a-~-------~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~ 69 (413)
-.++.|+++| |+|||+.++ .+.++.+++.+++... | ....+.+.-++..++.... ....++..|..
T Consensus 53 ~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt 132 (428)
T PF13347_consen 53 TDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELT 132 (428)
T ss_pred cCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHHHHHHHHHHHHHHhhhhccCchhhcCcccc
Confidence 4568899999 899888765 5667777777777666 4 2334566666666665544 34457788998
Q ss_pred c-CCCcchHHHHHHHHHHHHHHHHHHHHHHHhcC-------CChHHHHHHhhHHHHHHHH-HhhcCCCCchHHhhccChH
Q 015075 70 P-VSHRGRWMVALSAFWTAGTIFEASLAWVVMTR-------LNWRWLLAFSSVPSFALLL-FYGLAPESPRYLCAKARTV 140 (413)
Q Consensus 70 p-~~~Rg~~~~~~~~~~~~G~~~~~~l~~~l~~~-------~~Wr~~f~~~~i~~~~~~~-~~~~~pEsp~~l~~~~~~~ 140 (413)
+ +++|.+..+.-+.+..+|.++.+.+...+.+. .+|++..++.+++.++... ..+..+|.++ +.+
T Consensus 133 ~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke~~~------~~~ 206 (428)
T PF13347_consen 133 PDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKERSV------EVT 206 (428)
T ss_pred ccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHhhhhhheeeeccc------ccc
Confidence 8 47899999999888888887666655554421 1699998888777766543 4455566111 000
Q ss_pred HHHHHHHHHHHHcCCCCCCCccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhccchhhhHHHHHHH-HH
Q 015075 141 DAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWV-LF 219 (413)
Q Consensus 141 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 219 (413)
+++++ .+..+.++.+++.|..+......+ .+
T Consensus 207 -----------------------------~~~~~-------------------~~~~~~~~~~~~nr~~~~l~~~~~~~~ 238 (428)
T PF13347_consen 207 -----------------------------EQEKK-------------------ISLRDSLRSLFRNRPFRILLLAFFLQW 238 (428)
T ss_pred -----------------------------ccccc-------------------cccccchhhhcccchHHHHHHHHHHHH
Confidence 00000 000112223333222222222211 11
Q ss_pred HHHHHHhhhHHhhhhhccCCCCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHH
Q 015075 220 FANVFSYYGAVLLTSKLSSGDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIF 299 (413)
Q Consensus 220 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~ 299 (413)
+..........++.... .+.. ...+ ....+..+..+++.++.++++||+|+|+.+..+.+.....
T Consensus 239 ~~~~~~~~~~~y~~~~v-----------l~~~-~~~~---~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~ 303 (428)
T PF13347_consen 239 LAFALMNTFLPYYFTYV-----------LGNE-GLIS---IFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALG 303 (428)
T ss_pred hhhhhhhhHHHHHHHHH-----------hcCc-hhhH---HHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHH
Confidence 11111110011111110 0000 1111 1223445566778889999999999999888877776655
Q ss_pred HHHHHhc--chhHHHHHHHHHHHHHhhhhhhhhheecccccc-------cchhhhHHHHHHhhhhhhHhHHHHHHHHHhh
Q 015075 300 LLPLVFH--QSAVVTTVLLFGVRMCVTGTITVATIYAPEIYP-------TSARTTGFGVASSLGKVGGMVCPLVAVGLVT 370 (413)
Q Consensus 300 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p-------~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~ 370 (413)
.+.+.+. .+.............+........+.+.+|..+ ++..|.-.|+.+...+++..+++.+.+.+++
T Consensus 304 ~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~ 383 (428)
T PF13347_consen 304 FLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLA 383 (428)
T ss_pred HHHHHHHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHH
Confidence 5444432 244444444444455555566778889999887 3556888888888889999999888877765
Q ss_pred c
Q 015075 371 S 371 (413)
Q Consensus 371 ~ 371 (413)
.
T Consensus 384 ~ 384 (428)
T PF13347_consen 384 L 384 (428)
T ss_pred H
Confidence 4
No 106
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.60 E-value=9.6e-15 Score=142.93 Aligned_cols=147 Identities=16% Similarity=0.038 Sum_probs=109.6
Q ss_pred cccchhhHhhhhcCChHHHHHHHHHHHHHHH---HHhhcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHH
Q 015075 3 LGAYSWGIISDNYGRRKSFLGIAMVTSVAGL---LSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWM 78 (413)
Q Consensus 3 ~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~---~~~~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~ 78 (413)
+|+++.|+++||+|||+++..+.++..++.. ....+++...++++|++.|++.+.. .....++.|.+|++.||+..
T Consensus 301 ~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~ 380 (490)
T PRK10642 301 FVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSAL 380 (490)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHH
Confidence 5677889999999999998877665443332 2234556788889999999876643 44556778999999999988
Q ss_pred HH-HHHHHHHHHHHHHHHHHHHhcC-CChHHHHHHhhHHHHHHHHHhhcCCCCchHHhhc-----cChHHHHHHHHHHH
Q 015075 79 VA-LSAFWTAGTIFEASLAWVVMTR-LNWRWLLAFSSVPSFALLLFYGLAPESPRYLCAK-----ARTVDAHRILEKMA 150 (413)
Q Consensus 79 ~~-~~~~~~~G~~~~~~l~~~l~~~-~~Wr~~f~~~~i~~~~~~~~~~~~pEsp~~l~~~-----~~~~~a~~~~~~~~ 150 (413)
++ ++.+. .+..++|.+.+.+.+. .+|+.++++..+++++..+..+++||||+|+.++ +|.|||++.+++++
T Consensus 381 g~~~~~~~-~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~pes~~~~~~~~~~~~~~~~~a~~~l~~~~ 458 (490)
T PRK10642 381 AAAFNISV-LVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGVTMKETANRPLKGATPAASDIQEAKEILVEHY 458 (490)
T ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccccCCCCCCccccccchhhHHHHhhccc
Confidence 86 45544 4455677777766654 3588887777777776666667789999998865 89999999988775
No 107
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.58 E-value=2.7e-14 Score=114.66 Aligned_cols=128 Identities=24% Similarity=0.326 Sum_probs=111.1
Q ss_pred ccccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHHHH
Q 015075 2 LLGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVA 80 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~ 80 (413)
++++++.|++.||+|||+.+..+..+..++.+...++++++.+.+.+++.|++.+.. +....++.|..|+++|++..+.
T Consensus 12 ~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (141)
T TIGR00880 12 LIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPEERGVALGL 91 (141)
T ss_pred HHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChhhhhHHHHH
Confidence 356788899999999999999999999999999999999999999999999988765 6667889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHHH-HHhhcCCCC
Q 015075 81 LSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFALL-LFYGLAPES 129 (413)
Q Consensus 81 ~~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~~-~~~~~~pEs 129 (413)
.+....+|..+++.+.+.+.+..+|++.+++.++..++.. ...+..||+
T Consensus 92 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (141)
T TIGR00880 92 MSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPET 141 (141)
T ss_pred HHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 9999999999999999998888899999988877766543 344455653
No 108
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.58 E-value=1.9e-12 Score=124.44 Aligned_cols=116 Identities=15% Similarity=0.151 Sum_probs=91.8
Q ss_pred cccchhhHhhhhc-CChHHHHHHHHHHHHHHHHHhhcc-cHHHHHHHHHHhhhcccch-hHHHHHHHhhccCC--CcchH
Q 015075 3 LGAYSWGIISDNY-GRRKSFLGIAMVTSVAGLLSSFSP-NYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVS--HRGRW 77 (413)
Q Consensus 3 ~G~~~~g~l~Dr~-Grr~~~~~~~~l~~~~~~~~~~a~-~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~--~Rg~~ 77 (413)
+++++.|+++||+ |||+++.++.++..++.++.+... +...+.+.-.+.++|.|.. +...++++|.+|++ +|...
T Consensus 60 l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sg 139 (493)
T PRK15462 60 VTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGG 139 (493)
T ss_pred HHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccce
Confidence 4678899999999 999999999999999887776543 2233444444444555554 55668899999986 69989
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHH
Q 015075 78 MVALSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFA 118 (413)
Q Consensus 78 ~~~~~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~ 118 (413)
.++.....++|..++|.+.+.+.+..|||+.|.+.++..++
T Consensus 140 f~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l 180 (493)
T PRK15462 140 FSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIA 180 (493)
T ss_pred ehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHH
Confidence 99999999999999999999998889999999987664433
No 109
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.55 E-value=2.3e-12 Score=117.41 Aligned_cols=337 Identities=18% Similarity=0.184 Sum_probs=188.9
Q ss_pred cchhhHhhhhcCChHHHHHHH-HHHHHHHHHHhhccc--HHH-HHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHHH
Q 015075 5 AYSWGIISDNYGRRKSFLGIA-MVTSVAGLLSSFSPN--YVS-LVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMV 79 (413)
Q Consensus 5 ~~~~g~l~Dr~Grr~~~~~~~-~l~~~~~~~~~~a~~--~~~-l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~ 79 (413)
+++.|-++|+.|+||.++... ++-.+++.+..++++ ++. .+++-.+..++.... .-.-+++.+..++++-|+.++
T Consensus 75 apiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfyds~L~~~~~k~~~~riS~ 154 (438)
T COG2270 75 APILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFYDSMLPRLTTKDNMGRISG 154 (438)
T ss_pred HHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheehhhHhhhhcCccccCcccc
Confidence 456789999999988765544 445666777777776 443 344555666665443 334578889999999899887
Q ss_pred HHHHHHHHHHHHHHHHHH--HH-h---------------cCCChHHHHHHhhHHHHHH-HHHhhcCCCCchHHhhccChH
Q 015075 80 ALSAFWTAGTIFEASLAW--VV-M---------------TRLNWRWLLAFSSVPSFAL-LLFYGLAPESPRYLCAKARTV 140 (413)
Q Consensus 80 ~~~~~~~~G~~~~~~l~~--~l-~---------------~~~~Wr~~f~~~~i~~~~~-~~~~~~~pEsp~~l~~~~~~~ 140 (413)
+......+|+++.-.... .+ . +..+=|..+.+.++--+++ +.+++..||-++- +....
T Consensus 155 lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm~~~v~~~~~~---~~~~~ 231 (438)
T COG2270 155 LGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPMILNVHDAEKI---SSPPP 231 (438)
T ss_pred cccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHHHhcccccccc---cccch
Confidence 766666667665433321 11 1 1223455555444433333 2233334433320 00000
Q ss_pred HHHHHHHHHHHHcCCCCCCCccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhccchhhhHHHHHHHHHH
Q 015075 141 DAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFF 220 (413)
Q Consensus 141 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (413)
++. .+..|..+.+++....++.....++.+..+.
T Consensus 232 ~~l----------------------------------------------~~g~k~L~~t~k~i~~~~~i~~FLiA~~~~~ 265 (438)
T COG2270 232 TAL----------------------------------------------RNGFKELKSTFKEIRGRKNLVLFLIARFFYI 265 (438)
T ss_pred HHH----------------------------------------------HHHHHHHHHHHHHHhcccchHHHHHHHHHHH
Confidence 000 0001111122233333333333333332221
Q ss_pred --HHHHHhhhHHhhhhhccCCCCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHH
Q 015075 221 --ANVFSYYGAVLLTSKLSSGDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACI 298 (413)
Q Consensus 221 --~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~ 298 (413)
.+...-++..+-.. .+|+ ...++.......++.+++|+++.|++.||+|-|+++..+.++..+
T Consensus 266 DGv~til~~~~~fg~~------------~~gl---s~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~ 330 (438)
T COG2270 266 DGVNTILAMGGVFGAA------------DLGL---SSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSI 330 (438)
T ss_pred hhHHHHHHHHHHHHHH------------HcCc---cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHH
Confidence 11111111111111 1111 223344556677778899999999999999999887777766555
Q ss_pred HHHHHHhcchhHHHHHHHHHHHHHhhhhhhhhheecccccccchhhhHHHHHHhhhhhhHhHHHHHHHHHhhccchhHHH
Q 015075 299 FLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAV 378 (413)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~ 378 (413)
..+...+.........+-...+.+..+.++.+-.|..++.|++.-+.-.|+.+..++.+++.+|+..+.+.+.++..-.-
T Consensus 331 ~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g 410 (438)
T COG2270 331 AALYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAG 410 (438)
T ss_pred HHHHHHHccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhH
Confidence 44433332222211222233345566778888899999999999999999999999999999999998887777654333
Q ss_pred HHHHHHHHHHHHHhhcccccccCcchh
Q 015075 379 ILFEVVFVLAIASSLLFPFETMGRELK 405 (413)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~et~~~~l~ 405 (413)
+...++.+...+..+...|+.++++.+
T Consensus 411 ~~~i~vll~iGl~~L~~v~~~~~~~~~ 437 (438)
T COG2270 411 VLSIIVLLLIGLLLLLRVKVPGRREAE 437 (438)
T ss_pred HHHHHHHHHhhHhhEEeecCCCCcccc
Confidence 333333344445555566666555544
No 110
>PRK11462 putative transporter; Provisional
Probab=99.55 E-value=1e-11 Score=120.37 Aligned_cols=117 Identities=17% Similarity=0.161 Sum_probs=77.1
Q ss_pred ccchhhHhhhh----cCChHHHH-HHHHHHHHHHHHHhhccc------HHHHHHHHHHhhhcccch-hHHHHHHHhhcc-
Q 015075 4 GAYSWGIISDN----YGRRKSFL-GIAMVTSVAGLLSSFSPN------YVSLVIFRCFVGVGLGGV-PVFLAYFLEFVP- 70 (413)
Q Consensus 4 G~~~~g~l~Dr----~Grr~~~~-~~~~l~~~~~~~~~~a~~------~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p- 70 (413)
..++.|+++|| +|||+.++ .+.+..+++.+++-..|+ ...+.+.-++..++.... ..-.++..|.++
T Consensus 61 ~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d 140 (460)
T PRK11462 61 SDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITND 140 (460)
T ss_pred HhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCC
Confidence 34677999995 79987665 455677777666655553 334444555555544433 233466778877
Q ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHHHHhcC-------CChHHHHHHhhHHHHHHH
Q 015075 71 VSHRGRWMVALSAFWTAGTIFEASLAWVVMTR-------LNWRWLLAFSSVPSFALL 120 (413)
Q Consensus 71 ~~~Rg~~~~~~~~~~~~G~~~~~~l~~~l~~~-------~~Wr~~f~~~~i~~~~~~ 120 (413)
++||.+.+++-..+..+|..+++.+...+.+. .+|+....+.+++.++..
T Consensus 141 ~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~ 197 (460)
T PRK11462 141 PTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMML 197 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHH
Confidence 78999999999999998887776665544332 368887776666655543
No 111
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.54 E-value=8e-12 Score=111.54 Aligned_cols=298 Identities=16% Similarity=0.151 Sum_probs=184.8
Q ss_pred ccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHHHHHH
Q 015075 4 GAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALS 82 (413)
Q Consensus 4 G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~ 82 (413)
-+++..+++.|+|.++.+..++++..++.++-... +...++.+-.+.|.|.+.. ....+.+-|.+|+ +-+..+++|.
T Consensus 63 ~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~-~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk-~~~~mtglYs 140 (395)
T COG2807 63 FAPAAPRLARRFGEERSLFLALLLIAAGILIRSLG-GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPK-RVGLMTGLYS 140 (395)
T ss_pred HHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhccc-chhhHHhHHH
Confidence 45677889999999999999999999999998887 7777888999999988864 4456788899975 4588999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCC-ChHHHHHHhhHHHHHHHHHhhcCCCCchHHhhccChHHHHHHHHHHHHHcCCCCCCCc
Q 015075 83 AFWTAGTIFEASLAWVVMTRL-NWRWLLAFSSVPSFALLLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGI 161 (413)
Q Consensus 83 ~~~~~G~~~~~~l~~~l~~~~-~Wr~~f~~~~i~~~~~~~~~~~~pEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~ 161 (413)
...++|..+++.+...+.++. |||....+-++|+++.++.++- ...|. +.+
T Consensus 141 ~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~WlP--q~~r~-----~~~--------------------- 192 (395)
T COG2807 141 TSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWLP--QALRE-----QAA--------------------- 192 (395)
T ss_pred HHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHhh--hcccc-----ccc---------------------
Confidence 999999999999988888776 7999988888888777666542 21110 000
Q ss_pred cccchhhhhhhhccccccccccchhhhcchhhccccchhhhhccchhhhHHHHHHHHHHHHHHHhhhHHhhhhhccCCCC
Q 015075 162 LVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDN 241 (413)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 241 (413)
. +... .++. ..+++.+. ...+.+.+-.+.+.||...-|.+.+..+
T Consensus 193 ---~------~~~~-----------------~~~~----~~vw~~~~---aW~vtLfmGlqS~~~Y~~~~WLP~ili~-- 237 (395)
T COG2807 193 ---S------IATK-----------------LVSV----RKVWRSPL---AWQVTLFMGLQSLLYYIVIGWLPAILID-- 237 (395)
T ss_pred ---c------cccc-----------------cccc----cccccCch---hHHHHHHHHhhHHHHHHHHHHHHHHHHH--
Confidence 0 0000 0000 00111111 1111222234556666665555444211
Q ss_pred ccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhC-hhHHHHHHHHHHHHHHHHHHh--cchhHHHHHHHHH
Q 015075 242 KCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIG-RKLSMVLMFVSACIFLLPLVF--HQSAVVTTVLLFG 318 (413)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g-rr~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 318 (413)
.+.+..+.+. ...+..+.+++.++....+.+|.. +|+..+...+...+-.+-+.+ .+..+.. + +.
T Consensus 238 ------~G~sa~~aG~---llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~~lw-~--~l 305 (395)
T COG2807 238 ------RGLSAAEAGS---LLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQLPILW-A--LL 305 (395)
T ss_pred ------cCCCHHHhhh---HHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhhHHHHH-H--HH
Confidence 1223333332 234556677888899999999754 454443333222221111111 2222222 1 22
Q ss_pred HHHHhhhhhhhhheecc-cccccchhhhHHHHHHhhhhhhHhHHHHHHHHHhhccchhHHH
Q 015075 319 VRMCVTGTITVATIYAP-EIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAV 378 (413)
Q Consensus 319 ~~~~~~~~~~~~~~~~~-e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~ 378 (413)
.+....+.+++...... ..-.++..+.-.|....+|++-+.++|++.|++.|.++++...
T Consensus 306 lG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~ 366 (395)
T COG2807 306 LGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAP 366 (395)
T ss_pred HhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHH
Confidence 22233344454443333 3334567778889999999999999999999999998765443
No 112
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.49 E-value=1.1e-12 Score=112.56 Aligned_cols=92 Identities=14% Similarity=0.155 Sum_probs=70.2
Q ss_pred ccchhhHhhh-hcCChHHHHHHHHHHHHHHHHHh---hcccHHHHHHHHHHhhhcccchhH-HHHHHHhhccCCCcchHH
Q 015075 4 GAYSWGIISD-NYGRRKSFLGIAMVTSVAGLLSS---FSPNYVSLVIFRCFVGVGLGGVPV-FLAYFLEFVPVSHRGRWM 78 (413)
Q Consensus 4 G~~~~g~l~D-r~Grr~~~~~~~~l~~~~~~~~~---~a~~~~~l~~~R~l~G~~~g~~~~-~~~~~~E~~p~~~Rg~~~ 78 (413)
=++++|++.| |+|-|..-++-+++..++.++.+ ...+++++..+|++.|+|.....+ ..+|..-|+..+|-+.++
T Consensus 95 lcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vf 174 (459)
T KOG4686|consen 95 LCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVF 174 (459)
T ss_pred EeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchh
Confidence 4678899999 57777766666666666666553 457899999999999997554443 458899999999999999
Q ss_pred HHHHHHHHHHHHHHHHH
Q 015075 79 VALSAFWTAGTIFEASL 95 (413)
Q Consensus 79 ~~~~~~~~~G~~~~~~l 95 (413)
|+.....-+|+.+--.+
T Consensus 175 GlqlSvAR~GstvNf~l 191 (459)
T KOG4686|consen 175 GLQLSVARLGSTVNFLL 191 (459)
T ss_pred hHHHHHHHhhceeeeee
Confidence 99888888887644333
No 113
>PRK09848 glucuronide transporter; Provisional
Probab=99.49 E-value=2.8e-11 Score=117.33 Aligned_cols=105 Identities=15% Similarity=0.085 Sum_probs=68.1
Q ss_pred hhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcc--hhHHHHHHHHHHHHHhhhhhhhhheeccccccc----
Q 015075 267 LAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQ--SAVVTTVLLFGVRMCVTGTITVATIYAPEIYPT---- 340 (413)
Q Consensus 267 ~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~---- 340 (413)
+..+++..+.+++.||+|+|+.+..+.+...+..+.+.+.. +.+..........+......+..++..+|..|.
T Consensus 275 ~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~ 354 (448)
T PRK09848 275 VGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYL 354 (448)
T ss_pred HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHh
Confidence 34566788899999999999988877665544333333321 222222222222333334445667777777764
Q ss_pred ---chhhhHHHHHHhhhhhhHhHHHHHHHHHhhc
Q 015075 341 ---SARTTGFGVASSLGKVGGMVCPLVAVGLVTS 371 (413)
Q Consensus 341 ---~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~ 371 (413)
+.+|...|+.+...++|..+++.+.+.+++.
T Consensus 355 ~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~ 388 (448)
T PRK09848 355 TGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGL 388 (448)
T ss_pred hCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3568899999999999999999888776654
No 114
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.49 E-value=2.6e-11 Score=112.79 Aligned_cols=141 Identities=13% Similarity=0.100 Sum_probs=93.8
Q ss_pred HHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhhhhhhhhheecccccccc
Q 015075 262 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTS 341 (413)
Q Consensus 262 ~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~ 341 (413)
..+..+.+.+...+..++.+|+|.|+.++++..+..+=.....+.++.+.....=..-..-.........-|.++.+|++
T Consensus 265 ~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~r 344 (412)
T PF01306_consen 265 WSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKR 344 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GG
T ss_pred HHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHh
Confidence 34556677888889999999999999887766655544444444444443222222221111122234567899999999
Q ss_pred hhhhHHHHHHhh-hhhhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHhhcccccccCc
Q 015075 342 ARTTGFGVASSL-GKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETMGR 402 (413)
Q Consensus 342 ~r~~~~g~~~~~-~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~et~~~ 402 (413)
..++...+...+ .+++.++.+.+.|.+.|..+...++++.+.+.++..++..+.+++.++.
T Consensus 345 lsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~~~~~ 406 (412)
T PF01306_consen 345 LSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKKDKKQ 406 (412)
T ss_dssp GHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--SSST
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecCCCcc
Confidence 999999997544 4788888888899999998877788888888887777777776655543
No 115
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.43 E-value=1.2e-10 Score=109.62 Aligned_cols=302 Identities=18% Similarity=0.171 Sum_probs=168.1
Q ss_pred ccchhhHhhh----hcCChHHHH-HHHHHHHHHHHHHhhccc------HHHHHHHHHHhhhcccch-hHHHHHHHhhcc-
Q 015075 4 GAYSWGIISD----NYGRRKSFL-GIAMVTSVAGLLSSFSPN------YVSLVIFRCFVGVGLGGV-PVFLAYFLEFVP- 70 (413)
Q Consensus 4 G~~~~g~l~D----r~Grr~~~~-~~~~l~~~~~~~~~~a~~------~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p- 70 (413)
..++.|.+.| |+||||.++ .+.+.+++...++-.+++ ....++--.+.|++-... ..-.++..|..+
T Consensus 64 ~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d 143 (467)
T COG2211 64 TDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQD 143 (467)
T ss_pred hcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCC
Confidence 3567788888 588877654 455888888888888874 233444555666554432 223355667654
Q ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHHHHhc-------CCChHHHHHHhhHHHHHHHHH-hhcCCCCchHHhhccChHHH
Q 015075 71 VSHRGRWMVALSAFWTAGTIFEASLAWVVMT-------RLNWRWLLAFSSVPSFALLLF-YGLAPESPRYLCAKARTVDA 142 (413)
Q Consensus 71 ~~~Rg~~~~~~~~~~~~G~~~~~~l~~~l~~-------~~~Wr~~f~~~~i~~~~~~~~-~~~~pEsp~~l~~~~~~~~a 142 (413)
++||.+..++-+.+..+|.++...+...+.. ..||+..-++.++.+++.++. ++...|.+. ++
T Consensus 144 ~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~---------~~ 214 (467)
T COG2211 144 PQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERVV---------ET 214 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccC---------cc
Confidence 5799999999999999997776655544432 357888877777776665443 333444332 00
Q ss_pred HHHHHHHHHHcCCCCCCCccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhccchhhhHHHHHHHHHH-H
Q 015075 143 HRILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFF-A 221 (413)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 221 (413)
+.+++..+ ++....+..+++.|..+..+...+..+ .
T Consensus 215 ------------------------~~~~~~~~-------------------~~~~~~~~~~~~Nrp~~~~l~~~l~~~~~ 251 (467)
T COG2211 215 ------------------------QPTKTGVK-------------------LKLKDSFLLIFKNRPLLLLLLMNLLLFIA 251 (467)
T ss_pred ------------------------ccCccccc-------------------ccHHHHHHHHHccchHHHHHHHHHHHHHH
Confidence 00000000 000011222232222222222211111 1
Q ss_pred HHHHhhhHHhhhhhccCCCCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHH
Q 015075 222 NVFSYYGAVLLTSKLSSGDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLL 301 (413)
Q Consensus 222 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~ 301 (413)
.++..-...++..+. .. ..+...+..........+.+.++..++++|+|+|+.+..+.++..+...
T Consensus 252 ~~i~~s~~~yy~~y~-------------lg-~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~ 317 (467)
T COG2211 252 FNIRGSIMVYYVTYV-------------LG-DPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYL 317 (467)
T ss_pred HHHHhhhhheeEEEE-------------cC-ChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHH
Confidence 111100001111111 10 1111122223344444556688899999999999999888777766555
Q ss_pred HHHhcc--hhHHHHHHHHHHHHHhhhhhhhhheeccccc-------ccchhhhHHHHHHhhhhhhHhHHHHHHHHHhhc
Q 015075 302 PLVFHQ--SAVVTTVLLFGVRMCVTGTITVATIYAPEIY-------PTSARTTGFGVASSLGKVGGMVCPLVAVGLVTS 371 (413)
Q Consensus 302 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-------p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~ 371 (413)
.+.+.. +....++..+..........++.|++.+|.. ..|.-|...|+..++..+|..++..+.+.+++.
T Consensus 318 ~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~ 396 (467)
T COG2211 318 LLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGA 396 (467)
T ss_pred HHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 554432 2333333334444555566778999999887 346667788888888899888887777766644
No 116
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.42 E-value=8.8e-13 Score=132.67 Aligned_cols=128 Identities=16% Similarity=0.173 Sum_probs=109.8
Q ss_pred ccccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHHHH
Q 015075 2 LLGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVA 80 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~ 80 (413)
++|+++.|+++||+|||+++..+.++++++.++.+++++...+++++++.|+..++. +...++++|++|.++||+++++
T Consensus 609 i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~Pt~~Rgta~Gi 688 (742)
T TIGR01299 609 LPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELYPSDKRATAFGF 688 (742)
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHH
Confidence 468899999999999999999999999999999999999888999999988876654 6677899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHHHHHhhcCCCCc
Q 015075 81 LSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFALLLFYGLAPESP 130 (413)
Q Consensus 81 ~~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~~~~~~~~pEsp 130 (413)
......+|.+++|.+++.+... +.+.+|++.++..++..++..++||+.
T Consensus 689 ~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~ll~~~LPET~ 737 (742)
T TIGR01299 689 LNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACGGLLALKLPDTR 737 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 9999999999999998877653 456677777777766666666779874
No 117
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.29 E-value=1.8e-11 Score=117.35 Aligned_cols=128 Identities=15% Similarity=0.119 Sum_probs=104.8
Q ss_pred cccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcc----cHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchH
Q 015075 3 LGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSP----NYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRW 77 (413)
Q Consensus 3 ~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~----~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~ 77 (413)
++.++.|+++||+|||+++..+.++.+++..+...+. ++..+++.+++.|++.+.. +....++.|++|+++||+.
T Consensus 266 ~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~ 345 (418)
T TIGR00889 266 FFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASA 345 (418)
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
Confidence 4567889999999999999999999888877666632 2466778899999998865 5667889999999999999
Q ss_pred HHHHH-HHHHHHHHHHHHHHHHHhcC------CChHHHHHHhhHHHHHH-HHHhhcCCCCc
Q 015075 78 MVALS-AFWTAGTIFEASLAWVVMTR------LNWRWLLAFSSVPSFAL-LLFYGLAPESP 130 (413)
Q Consensus 78 ~~~~~-~~~~~G~~~~~~l~~~l~~~------~~Wr~~f~~~~i~~~~~-~~~~~~~pEsp 130 (413)
+++.+ ..+.+|..++|++++.+.+. +|||..|.+.++..++. ....++++|+.
T Consensus 346 ~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~ 406 (418)
T TIGR00889 346 QGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYSH 406 (418)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 99997 67889999999999988775 57999998887776654 55566678774
No 118
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.28 E-value=7.6e-11 Score=94.38 Aligned_cols=133 Identities=17% Similarity=0.213 Sum_probs=96.8
Q ss_pred hhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhhhhhhhhheecccccccchhhhH
Q 015075 267 LAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTTG 346 (413)
Q Consensus 267 ~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~ 346 (413)
+..+++..+.+++.||+|||+.+..+.....+..+......+........+...++.....+..+.+..|.+|++.|+++
T Consensus 9 ~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (141)
T TIGR00880 9 LGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPEERGVA 88 (141)
T ss_pred hHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChhhhhHH
Confidence 34556788899999999999988776665555444443333333333333333344444556677889999999999999
Q ss_pred HHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHhhcccccc
Q 015075 347 FGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFET 399 (413)
Q Consensus 347 ~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~et 399 (413)
.++.+...+++..++|.+.+.+.+..+....+++.+.+.+++.+..+++.|||
T Consensus 89 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (141)
T TIGR00880 89 LGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPET 141 (141)
T ss_pred HHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 99999999999999999988887766665667777777777777777777765
No 119
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.27 E-value=2.1e-11 Score=117.16 Aligned_cols=128 Identities=12% Similarity=0.078 Sum_probs=106.1
Q ss_pred cccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHHHH-
Q 015075 3 LGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVA- 80 (413)
Q Consensus 3 ~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~- 80 (413)
++++++|++.||+|||+.+..+.++.+++.++.++++|.+.+++.+++.|++.+.. +....++.|.+|++.|+...+.
T Consensus 277 ~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 356 (420)
T PRK09528 277 LIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVG 356 (420)
T ss_pred HHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeeh
Confidence 57789999999999999999999999999899999999999999999999987764 4556788999999999887654
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHH-HHHhhcCCCCc
Q 015075 81 LSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFAL-LLFYGLAPESP 130 (413)
Q Consensus 81 ~~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~-~~~~~~~pEsp 130 (413)
++....+|.++++++.+.+.+..|||..|...++..++. .+.+...++.|
T Consensus 357 ~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~~~ 407 (420)
T PRK09528 357 FQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSGDR 407 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 667788999999999999999899999999877666544 34444444443
No 120
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.26 E-value=6.7e-10 Score=102.13 Aligned_cols=336 Identities=16% Similarity=0.110 Sum_probs=184.1
Q ss_pred chhhHhhhhcCChHHHHHHHHHHHHHHHHHhhccc------HH--HHHHHHHHhhhcccchhHHHH-HHHhhccCCCcch
Q 015075 6 YSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPN------YV--SLVIFRCFVGVGLGGVPVFLA-YFLEFVPVSHRGR 76 (413)
Q Consensus 6 ~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~------~~--~l~~~R~l~G~~~g~~~~~~~-~~~E~~p~~~Rg~ 76 (413)
+..-|+.|++|-|....++.++.+++..+-..+.. ++ ..+.+..+.+.+.-......+ ...-|+|+++|..
T Consensus 97 f~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~ 176 (480)
T KOG2563|consen 97 FAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAI 176 (480)
T ss_pred hHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhh
Confidence 45578999999999999999999999987766543 23 334444444444332222323 3456999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcC------CChHH--HHHHhhHHHHH-HHHHhhcCCCCchHHhhccChHHHHHHHH
Q 015075 77 WMVALSAFWTAGTIFEASLAWVVMTR------LNWRW--LLAFSSVPSFA-LLLFYGLAPESPRYLCAKARTVDAHRILE 147 (413)
Q Consensus 77 ~~~~~~~~~~~G~~~~~~l~~~l~~~------~~Wr~--~f~~~~i~~~~-~~~~~~~~pEsp~~l~~~~~~~~a~~~~~ 147 (413)
++.+-..+..+|..++.++...+.++ ..|.- +|+.......+ +....+..+|.|+.
T Consensus 177 A~~~~v~~n~LGvavg~llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~t--------------- 241 (480)
T KOG2563|consen 177 ATVLGVMGNPLGVAVGFLLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPT--------------- 241 (480)
T ss_pred hhhHHHhcchHHHHHHhhccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC---------------
Confidence 99999999999998888777766543 34655 34433333322 22222333444431
Q ss_pred HHHHHcCCCCCCCccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhc-cchhhhHHHHHHHHHHHHHHHh
Q 015075 148 KMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLF-SRKLIRTTLLLWVLFFANVFSY 226 (413)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 226 (413)
|+ ...+...++ . .-.++.+.++ .+++. ++...+..+...+
T Consensus 242 ----------Pp----s~s~~~~~~-------~--------------~f~~si~~~~~n~~F~----il~~~ygi~~g~F 282 (480)
T KOG2563|consen 242 ----------PP----SASQAALQD-------A--------------SFPKSIKSCFKNRQFI----ILAICYGIGLGLF 282 (480)
T ss_pred ----------CC----chhHhhhhc-------C--------------cHHHHHHHHHcCccHH----HHHHHHhhhHHHH
Confidence 00 000000000 0 0011222222 22222 2233333333333
Q ss_pred hhHHhhhh-hccCCCCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhCh-hHHHHHHHHHHHHH-HHHH
Q 015075 227 YGAVLLTS-KLSSGDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGR-KLSMVLMFVSACIF-LLPL 303 (413)
Q Consensus 227 ~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~gr-r~~~~~~~~~~~~~-~~~~ 303 (413)
++...... .+.. .+......+. ...+..+.+++|.++.|.+.||.+. |..++......... +...
T Consensus 283 ~~l~~~l~~~l~~---------sgY~~~~aG~---ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~ 350 (480)
T KOG2563|consen 283 NSLSTLLNLALCP---------SGYEGVFAGY---IGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLL 350 (480)
T ss_pred HHHHHHhhhcccc---------ccCCccccch---hHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 44333322 2211 1111122232 2345556678899999999999754 33333333222222 1111
Q ss_pred Hh--c-chhHHHHHHHHHHHHHhhhhhhhhheecccccccchhhhHHHHHHhhhhhhHhHHHHHHHHHhhccc----hhH
Q 015075 304 VF--H-QSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCH----LRL 376 (413)
Q Consensus 304 ~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~----~~~ 376 (413)
.. . ...++........+++..+-.++..-+..|.-=|..-++..|+.+..|++-+++-+++.+...+..+ ...
T Consensus 351 ~~t~~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~ 430 (480)
T KOG2563|consen 351 TCTLFLGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFP 430 (480)
T ss_pred HhhccCCceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCcc
Confidence 11 1 1122222223333445555566666777787777788999999999999988888877776665544 233
Q ss_pred HHHHHHHHHHHHHHHhhcccccccCcchhhh
Q 015075 377 AVILFEVVFVLAIASSLLFPFETMGRELKDT 407 (413)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~et~~~~l~~~ 407 (413)
.-+.....+.+......++.|+-++++.|++
T Consensus 431 ~~i~~~~~~~l~~~lva~~r~~y~R~~~e~~ 461 (480)
T KOG2563|consen 431 ANIFLTVSALLGAILVAFFRPDYRRLRAEAG 461 (480)
T ss_pred chhHhHHHHHHHHHHHhhhhhhHHhHhhhhc
Confidence 3455556666666777777777766666643
No 121
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.25 E-value=4.8e-11 Score=113.85 Aligned_cols=126 Identities=18% Similarity=0.170 Sum_probs=107.5
Q ss_pred cccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHHHHH
Q 015075 3 LGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVAL 81 (413)
Q Consensus 3 ~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~ 81 (413)
+|.++.|++.||+|||+.+..+..+.+++.++..+.++.+.+++.+++.|++.+.. +.......|..|+++||+..+++
T Consensus 264 ~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 343 (399)
T PRK05122 264 GARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAY 343 (399)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 57788999999999999999888888888888888889888889999999998764 55566778999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHHHHHhhcCCC
Q 015075 82 SAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFALLLFYGLAPE 128 (413)
Q Consensus 82 ~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~~~~~~~~pE 128 (413)
+....+|..+++++.+.+.+..||++.|++.++..++..+..+.+++
T Consensus 344 ~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 390 (399)
T PRK05122 344 SVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYR 390 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999898888899999999887777665555444443
No 122
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.23 E-value=9.3e-11 Score=111.64 Aligned_cols=125 Identities=17% Similarity=0.119 Sum_probs=102.0
Q ss_pred cccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHHHHH
Q 015075 3 LGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVAL 81 (413)
Q Consensus 3 ~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~ 81 (413)
++.+++|+++||+|||+.+..+.+...+.......+++.+.+++.|++.+++.|.. +....+..|..|. +||+.++++
T Consensus 267 ~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~-~~g~~~~~~ 345 (393)
T PRK15011 267 PTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNAIYIGILGGIGMLYFQDLMPG-QAGSATTLY 345 (393)
T ss_pred HHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-CcchHHHHH
Confidence 46788999999999999887776665555555556778888889999998877654 4555677898875 699999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHHHHHhhcCCC
Q 015075 82 SAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFALLLFYGLAPE 128 (413)
Q Consensus 82 ~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~~~~~~~~pE 128 (413)
+....+|..+++.+++.+.+.+||+..|++.+++.++..+..++.||
T Consensus 346 ~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 392 (393)
T PRK15011 346 TNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLRIKD 392 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcC
Confidence 99999999999999999998899999999888888777777666665
No 123
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.23 E-value=7.3e-10 Score=103.55 Aligned_cols=122 Identities=17% Similarity=0.228 Sum_probs=104.9
Q ss_pred cchhhHhhhh-cCChHHHHHHHHHHHHHHHHHhhcc--cHHHHHHHHHHhhhcccch-hHHHHHHHhhccCC--CcchHH
Q 015075 5 AYSWGIISDN-YGRRKSFLGIAMVTSVAGLLSSFSP--NYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVS--HRGRWM 78 (413)
Q Consensus 5 ~~~~g~l~Dr-~Grr~~~~~~~~l~~~~~~~~~~a~--~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~--~Rg~~~ 78 (413)
..+.||++|| .|+|++++++.++..++-++.+..+ +...++++-++.++|.|.. +...+++.|..|++ +|-...
T Consensus 78 ~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gF 157 (498)
T COG3104 78 PIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGF 157 (498)
T ss_pred HHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCc
Confidence 4678999997 5999999999999999999999884 7889999999999999987 88889999999886 366667
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHHHHHhhcC
Q 015075 79 VALSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFALLLFYGLA 126 (413)
Q Consensus 79 ~~~~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~~~~~~~~ 126 (413)
+++..+.++|++++|.+.+.+.+..||+..|...++-....++.++..
T Consensus 158 t~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~ 205 (498)
T COG3104 158 TLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLG 205 (498)
T ss_pred cEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc
Confidence 788888999999999999999999999999998888766555544443
No 124
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.23 E-value=6.3e-10 Score=106.54 Aligned_cols=138 Identities=13% Similarity=0.021 Sum_probs=97.5
Q ss_pred HHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhhhhhhhhheecccccccchh
Q 015075 264 IASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSAR 343 (413)
Q Consensus 264 ~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r 343 (413)
...++..++.+..|++.||+|||+.+..+.+...+......+.++.......-+..+++..+..+....+..|.+|++.|
T Consensus 51 ~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r 130 (412)
T TIGR02332 51 LFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFR 130 (412)
T ss_pred HHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHH
Confidence 44455667888999999999999988877766655554444444443333333334444444455666788999999999
Q ss_pred hhHHHHHHhhhhhhHhHHHHHHHHHhh------ccchhHHHHHHHHHHHHHHHHhhcccccccC
Q 015075 344 TTGFGVASSLGKVGGMVCPLVAVGLVT------SCHLRLAVILFEVVFVLAIASSLLFPFETMG 401 (413)
Q Consensus 344 ~~~~g~~~~~~~~~~~~~p~~~~~l~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~et~~ 401 (413)
+.+.|+.+....+|..++|.+.+.+.+ ..++...+++.++..++..++.+++.||+..
T Consensus 131 g~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~ 194 (412)
T TIGR02332 131 ARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPD 194 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcc
Confidence 999999999999999999998887753 2356667777666666655666666677753
No 125
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.21 E-value=5.6e-10 Score=105.81 Aligned_cols=142 Identities=16% Similarity=0.180 Sum_probs=101.1
Q ss_pred HHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhhhhhhhhheecccccccc
Q 015075 262 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTS 341 (413)
Q Consensus 262 ~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~ 341 (413)
.....++..++.++.|++.||+|||+.+..+.+...+........++........+...++.....+....+..|.+|++
T Consensus 46 ~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~ 125 (385)
T TIGR00710 46 LTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGE 125 (385)
T ss_pred HHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcH
Confidence 34445566778899999999999999988877666555544444444333333333333333334456677889999999
Q ss_pred hhhhHHHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHhhcccccccCcc
Q 015075 342 ARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETMGRE 403 (413)
Q Consensus 342 ~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~et~~~~ 403 (413)
.|++..|+.+....++..++|.+.+.+.+..+....+++.+++.++..+...+..||++.++
T Consensus 126 ~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (385)
T TIGR00710 126 ELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFILPETLPYE 187 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCCCCCc
Confidence 99999999999999999999999888877666666777777666666666666667775543
No 126
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.20 E-value=9.2e-10 Score=102.83 Aligned_cols=138 Identities=17% Similarity=0.190 Sum_probs=98.1
Q ss_pred HHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhhhhhhhhheecccccccc
Q 015075 262 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTS 341 (413)
Q Consensus 262 ~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~ 341 (413)
.....+...++.++.|.++||+|||+.+..+.+...+..+...+..+.+......+..+.+.....+....+..|.+|++
T Consensus 38 ~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~ 117 (352)
T PF07690_consen 38 FSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPE 117 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhhhhHHHHhhhccccccccccccccccccccccchhh
Confidence 34455567788999999999999999888877776665333333234333334444444444455667788999999999
Q ss_pred hhhhHHHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHhhcccccc
Q 015075 342 ARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFET 399 (413)
Q Consensus 342 ~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~et 399 (413)
.|+...++.+....+|..++|.+.+.+.+..+....+++.+++.+++.++..++.+|+
T Consensus 118 ~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~ 175 (352)
T PF07690_consen 118 ERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAILFILFLPEP 175 (352)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHCCC---
T ss_pred hhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhhhhHhhhhhhc
Confidence 9999999999999999999999988887666666778888777777766433343333
No 127
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.20 E-value=1.1e-09 Score=106.86 Aligned_cols=134 Identities=12% Similarity=0.170 Sum_probs=86.1
Q ss_pred HHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhhhhhhhhheecccccccchh
Q 015075 264 IASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSAR 343 (413)
Q Consensus 264 ~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r 343 (413)
...++..++.++.|+++||+|||+.+..+.+...+..+......+........+..+++... ......+.+|.+|++.|
T Consensus 79 ~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s~~~l~~~r~l~G~~~~~-~~~~~~~i~~~~~~~~r 157 (476)
T PLN00028 79 ASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVSSATGFIAVRFFIGFSLAT-FVSCQYWMSTMFNGKIV 157 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh-hHHHHHHHHHhcChhhe
Confidence 44455677889999999999999988776666555444444433333222222222222222 22334467899999999
Q ss_pred hhHHHHHHhhhhhhHhHHHHHHHHHhh----c-----cchhHHHHHHHHHHHHHHHHhhccccc
Q 015075 344 TTGFGVASSLGKVGGMVCPLVAVGLVT----S-----CHLRLAVILFEVVFVLAIASSLLFPFE 398 (413)
Q Consensus 344 ~~~~g~~~~~~~~~~~~~p~~~~~l~~----~-----~~~~~~~~~~~~~~~~~~~~~~~~~~e 398 (413)
+.+.|+.+..+++|+.+++.+.+.+.. . .++...+++.+++.++..+..++++++
T Consensus 158 g~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~ 221 (476)
T PLN00028 158 GTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTLGQD 221 (476)
T ss_pred eHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHcCc
Confidence 999999998888888777666543322 1 245667777777776666666665544
No 128
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.19 E-value=1.5e-09 Score=103.69 Aligned_cols=307 Identities=20% Similarity=0.238 Sum_probs=178.1
Q ss_pred cccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccc---hhHHHHHHHhhccCCCcchHHH
Q 015075 3 LGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGG---VPVFLAYFLEFVPVSHRGRWMV 79 (413)
Q Consensus 3 ~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~---~~~~~~~~~E~~p~~~Rg~~~~ 79 (413)
+-+...|.++||+|||..+....+...+..++..+.. +++++ +.|+.-+. .....+|+++....++|....+
T Consensus 77 i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~--~~~~~---~~~l~g~~~~~~s~~~a~vadis~~~~R~~~~g 151 (463)
T KOG2816|consen 77 ISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG--YWFFL---LLGLSGGFSAIFSVGFAYVADISSEEERSSSIG 151 (463)
T ss_pred HHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH--HHHhh---hcccccchhhhhhhhhhheeeccchhHHHHHHH
Confidence 4567789999999999999999998888888877777 33333 66664332 2456789999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHH-HHHhhcCCCCchHHhhccChHHHHHHHHHHHHHcCCCCC
Q 015075 80 ALSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFAL-LLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLP 158 (413)
Q Consensus 80 ~~~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~-~~~~~~~pEsp~~l~~~~~~~~a~~~~~~~~~~~~~~~~ 158 (413)
+....+..+..++|.++..+....|--..|.+..+..++. ...+.++|||-+. +++.++. . ++..
T Consensus 152 ll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~---~~~~~~~---------~--~~~~ 217 (463)
T KOG2816|consen 152 LLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQE---KERSDAT---------L--RELT 217 (463)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCc---ccccccc---------c--cccC
Confidence 9999999999999999999988889999999888877664 5677889998641 1111000 0 0000
Q ss_pred CCccccchhhhhhhhccccccccccchhhhcchhhccccchhhhhccchhhhHHHHHHHHHH-HHHHHhhhHH-hhhhhc
Q 015075 159 PGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFF-ANVFSYYGAV-LLTSKL 236 (413)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~l 236 (413)
.+.. ..+ +. . ..++.....+..+..+.+....+ ......-+.. ...
T Consensus 218 ~~~~--~~~----~~--------------------~---~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~--- 265 (463)
T KOG2816|consen 218 PGSL--DSS----HV--------------------A---DAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLL--- 265 (463)
T ss_pred CCcc--cch----hh--------------------h---hhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEE---
Confidence 0000 000 00 0 00000000111111111111111 1100000000 000
Q ss_pred cCCCCccCccccccCCCCChhHHHHHHHHHhhhhhHHHHHH-HHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHHHHHH
Q 015075 237 SSGDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSA-IIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVL 315 (413)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g-~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (413)
.+....++++....+.. .......+..+.++.. .+...+|-|+....+++.-.+....+.+.++.+.....
T Consensus 266 -----~yl~~~f~w~~~~~s~~---~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~~w~~~~~ 337 (463)
T KOG2816|consen 266 -----LYLKAKFGWNKKEFSDL---LSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATETWMMFAA 337 (463)
T ss_pred -----EEEeeecCcCHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhccchhhhHH
Confidence 11111223333222211 1223333444555554 77778888886666666555545445555554432211
Q ss_pred HHHHHHHhhhhhhhhheecccccccchhhhHHHHHHhhhhhhHhHHHHHHHHHh
Q 015075 316 LFGVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLV 369 (413)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~ 369 (413)
.. .........+..-+..+-+..++.++...++...+-.++++++|.+.+.+.
T Consensus 338 ~v-~~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~ 390 (463)
T KOG2816|consen 338 GV-VVALAGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIF 390 (463)
T ss_pred HH-HHHhhcchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHH
Confidence 11 112222334455667778888999999999999999999999998877554
No 129
>TIGR00895 2A0115 benzoate transport.
Probab=99.19 E-value=4.2e-10 Score=107.00 Aligned_cols=138 Identities=17% Similarity=0.171 Sum_probs=97.6
Q ss_pred HHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhhhhhhhhheecccccccch
Q 015075 263 FIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSA 342 (413)
Q Consensus 263 ~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~ 342 (413)
....+...++.++.|+++||+|||+.+..+.+...+........++........+...++.....+....+..|.+|++.
T Consensus 59 ~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 138 (398)
T TIGR00895 59 SAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRF 138 (398)
T ss_pred HHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHh
Confidence 34455667889999999999999998888776665554444444443333333333333344455667889999999999
Q ss_pred hhhHHHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHhhccccccc
Q 015075 343 RTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETM 400 (413)
Q Consensus 343 r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~et~ 400 (413)
|+.+.++.+....+|+.++|.+.+.+.+..+....+.+.+++..+..+...++.||+.
T Consensus 139 r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (398)
T TIGR00895 139 RGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLPESI 196 (398)
T ss_pred hchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHHHHHhCCCCC
Confidence 9999999999999999999999888877666655666655555555555555566764
No 130
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.18 E-value=1e-09 Score=104.97 Aligned_cols=139 Identities=17% Similarity=0.140 Sum_probs=96.2
Q ss_pred HHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhhhhhhhhheecccccccc
Q 015075 262 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTS 341 (413)
Q Consensus 262 ~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~ 341 (413)
.....++..++.++.|+++||+|||+.+..+.+...+..+......+........+...++.....+....+..|.+|++
T Consensus 56 ~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~ 135 (406)
T PRK11551 56 FSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPR 135 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHH
Confidence 34455666788999999999999999988877665554444344444333333333333333344556677899999999
Q ss_pred hhhhHHHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHhhccccccc
Q 015075 342 ARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETM 400 (413)
Q Consensus 342 ~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~et~ 400 (413)
.|+++.++.+....+|+.++|.+...+.+..+....+++.+++.++..+...+..||+.
T Consensus 136 ~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 194 (406)
T PRK11551 136 LRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVPLLMRWLPESR 194 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHhCCCCh
Confidence 99999999999999999999988766666556666666666655555555555566764
No 131
>PRK10054 putative transporter; Provisional
Probab=99.18 E-value=9.2e-10 Score=104.81 Aligned_cols=136 Identities=14% Similarity=0.142 Sum_probs=92.1
Q ss_pred HHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhhhhhhhhheecccccccchh
Q 015075 264 IASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSAR 343 (413)
Q Consensus 264 ~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r 343 (413)
+..+...++.++.|+++||+|||+.+..+.+...+....+.+.++.+.................+....+.+|..|++.|
T Consensus 51 ~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 130 (395)
T PRK10054 51 IALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSK 130 (395)
T ss_pred HHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHH
Confidence 34455667788999999999999988877766655444444444433222222222222222345567778999999999
Q ss_pred hhHHHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHhhccccccc
Q 015075 344 TTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETM 400 (413)
Q Consensus 344 ~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~et~ 400 (413)
+.+.|+.+...++|..++|.+.+.+.+ .+....+...+++.+++.+...+..||++
T Consensus 131 ~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~i~~~~~~~~~~ 186 (395)
T PRK10054 131 TKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFPLVFIQIWVQRSE 186 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHHHHHHHHHhccc
Confidence 999999999999999999998887664 45666777766666666555555445543
No 132
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.17 E-value=1.7e-09 Score=102.94 Aligned_cols=137 Identities=11% Similarity=0.045 Sum_probs=98.8
Q ss_pred HHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhhhhhhhhheecccccccchh
Q 015075 264 IASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSAR 343 (413)
Q Consensus 264 ~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r 343 (413)
...+...++.++.|.++||+|||+.+..+.+...+..+.....++.+......+...++.....+....+.+|.+|++.|
T Consensus 63 ~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~ 142 (394)
T PRK10213 63 VTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTV 142 (394)
T ss_pred HHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHH
Confidence 44556667888999999999999998887777665554444444444333333344444444556677788999999999
Q ss_pred hhHHHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHhhccccccc
Q 015075 344 TTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETM 400 (413)
Q Consensus 344 ~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~et~ 400 (413)
+.+.++......++..++|.+.+.+.+..+....+++.++++++..+......||++
T Consensus 143 ~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~~~p~~~ 199 (394)
T PRK10213 143 PKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSLP 199 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHCCCCC
Confidence 999999999999999999999988887777777777666666555444444456654
No 133
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.16 E-value=5.2e-10 Score=106.09 Aligned_cols=140 Identities=15% Similarity=0.131 Sum_probs=101.4
Q ss_pred HHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhhhhhhhhheecccccccc
Q 015075 262 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTS 341 (413)
Q Consensus 262 ~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~ 341 (413)
..+..+...++.++.|+++||+|||+.+..+.+...+.........+........+..+++.....+....+.+|.+|++
T Consensus 35 ~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~ 114 (399)
T TIGR00893 35 FSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVSLYILRVLLGAAEAPFFPGIILIVASWFPAS 114 (399)
T ss_pred HHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHH
Confidence 34455666778899999999999999888777665554444444444333333333444444445566778899999999
Q ss_pred hhhhHHHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHhhcccccccC
Q 015075 342 ARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETMG 401 (413)
Q Consensus 342 ~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~et~~ 401 (413)
.|+.+.++.+....+|..++|.+.+.+.+..+....+.+.+++.++..+..++..||++.
T Consensus 115 ~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (399)
T TIGR00893 115 ERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVLWLKFIPDPPQ 174 (399)
T ss_pred HHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhheecCCCC
Confidence 999999999999999999999998877777776677777777766666666666666544
No 134
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.15 E-value=2.5e-10 Score=106.42 Aligned_cols=124 Identities=24% Similarity=0.351 Sum_probs=111.5
Q ss_pred ccccchhhHhhhhcCChH-HHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHHH
Q 015075 2 LLGAYSWGIISDNYGRRK-SFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMV 79 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~-~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~ 79 (413)
.+|.++++++.||+|||+ .+..+.++..++.+...+.++...+++..++.|++.+.. +...+++.|..|+++|++..+
T Consensus 225 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (352)
T cd06174 225 ILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASG 304 (352)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHH
Confidence 357788999999999999 999999999999999999999999999999999998875 677889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHHHHHhhc
Q 015075 80 ALSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFALLLFYGL 125 (413)
Q Consensus 80 ~~~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~~~~~~~ 125 (413)
+.+....+|..+++.+.+.+.+..+|++.+++.++..++..+...+
T Consensus 305 ~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~~~ 350 (352)
T cd06174 305 LFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLLLL 350 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhee
Confidence 9999999999999999999988899999999988887766555443
No 135
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.15 E-value=2.4e-09 Score=102.10 Aligned_cols=138 Identities=19% Similarity=0.142 Sum_probs=91.8
Q ss_pred HHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhhhhhhhhheecccccccch
Q 015075 263 FIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSA 342 (413)
Q Consensus 263 ~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~ 342 (413)
.+..+...++.++.|.++||+|||+.+..+.+...+..+.....++........+..+.+.....+....+..|.+|++.
T Consensus 54 ~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~ 133 (405)
T TIGR00891 54 SAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHL 133 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhh
Confidence 34455667789999999999999999887776655544444444443333333333334444455667778899999999
Q ss_pred hhhHHHHHHhhhhhhHhHHHHHHHHHhhccc--hhHHHHHHHHHHHHHHHHhhcccccccC
Q 015075 343 RTTGFGVASSLGKVGGMVCPLVAVGLVTSCH--LRLAVILFEVVFVLAIASSLLFPFETMG 401 (413)
Q Consensus 343 r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~et~~ 401 (413)
|+.+.++.+....+|.+++|.+.+.+.+..+ ....+++..+..++. +......||++.
T Consensus 134 ~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~-~~~~~~~~~~~~ 193 (405)
T TIGR00891 134 RNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFA-LWLRKNIPEAED 193 (405)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHH-HHHHHhCCCChh
Confidence 9999999999999999999988877766544 344444433333333 333344567643
No 136
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.15 E-value=1.9e-09 Score=103.19 Aligned_cols=138 Identities=17% Similarity=0.161 Sum_probs=98.2
Q ss_pred HHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhhhhhhhhheecccccccchh
Q 015075 264 IASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSAR 343 (413)
Q Consensus 264 ~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r 343 (413)
+..++..++.++.|.++||+|||+.+..+.++..+..+.....++.....+.-+..+++.....+..+.+..|.+|++.|
T Consensus 59 ~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~ 138 (413)
T PRK15403 59 LYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKG 138 (413)
T ss_pred HHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHH
Confidence 33455667888999999999999988887766655544444444443333333333333222334456788899999999
Q ss_pred hhHHHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHhhcccccccC
Q 015075 344 TTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETMG 401 (413)
Q Consensus 344 ~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~et~~ 401 (413)
+...++.+....++..++|.+.+.+.+..++...+++.+++.+++.+...+..||+++
T Consensus 139 ~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp~~~~ 196 (413)
T PRK15403 139 IKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPETVK 196 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCCcc
Confidence 9999999999999999999988877776677777877777777776655555678754
No 137
>PRK12382 putative transporter; Provisional
Probab=99.15 E-value=2.3e-10 Score=108.92 Aligned_cols=120 Identities=18% Similarity=0.217 Sum_probs=105.2
Q ss_pred cccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHHHHH
Q 015075 3 LGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVAL 81 (413)
Q Consensus 3 ~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~ 81 (413)
+++++.|++.||+|||+.+..+..+..++.++..++++...+++.+++.|++.+.. +.....+.|..|+++||+..+++
T Consensus 264 ~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 343 (392)
T PRK12382 264 LMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGY 343 (392)
T ss_pred HHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 56788999999999999999998888888888888899888889999999988764 56667788999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHHHHH
Q 015075 82 SAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFALLLF 122 (413)
Q Consensus 82 ~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~~~~ 122 (413)
+....+|..+++.+.+.+.+..||++.|.+.++..++....
T Consensus 344 ~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~ 384 (392)
T PRK12382 344 AAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIV 384 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHH
Confidence 99999999999999999999899999999888776654433
No 138
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.14 E-value=2.1e-10 Score=109.66 Aligned_cols=120 Identities=16% Similarity=0.227 Sum_probs=104.1
Q ss_pred cccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHHHHH
Q 015075 3 LGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVAL 81 (413)
Q Consensus 3 ~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~ 81 (413)
++.+++|+++||+|||+.+..+.++..++.+...+.++.+.+++.+++.|++.|.. +...+++.|..|+++||+..+..
T Consensus 273 ~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 352 (408)
T PRK09874 273 LSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYN 352 (408)
T ss_pred HHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHH
Confidence 45566789999999999999988888888888888888999999999999988875 66667788999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHHHHH
Q 015075 82 SAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFALLLF 122 (413)
Q Consensus 82 ~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~~~~ 122 (413)
.....+|..++|.+++.+.+..||++.|++.++..++..+.
T Consensus 353 ~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~ 393 (408)
T PRK09874 353 QSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVY 393 (408)
T ss_pred HHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999888777665443
No 139
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.14 E-value=1.8e-09 Score=102.78 Aligned_cols=140 Identities=12% Similarity=0.052 Sum_probs=97.5
Q ss_pred HHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhhhhhhhhheecccccccch
Q 015075 263 FIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSA 342 (413)
Q Consensus 263 ~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~ 342 (413)
....+....+.++.|+++||+|||+.+..+.+...+.........+........+....+.....+..+.+..|.+|++.
T Consensus 45 ~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~ 124 (392)
T PRK10473 45 SVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRR 124 (392)
T ss_pred HHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHH
Confidence 34445566788899999999999998887776655554444433333322222223333333344567788899999999
Q ss_pred hhhHHHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHhhcccccccCc
Q 015075 343 RTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETMGR 402 (413)
Q Consensus 343 r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~et~~~ 402 (413)
|+.+.++.+....++..++|.+.+.+.+..++...+++.+++.++..+..++..||++.+
T Consensus 125 r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 184 (392)
T PRK10473 125 RAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLFILKETRPA 184 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHHcCCCCCc
Confidence 999999999999999999998887766666666667777777666666666666777543
No 140
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.12 E-value=1.3e-09 Score=106.72 Aligned_cols=139 Identities=10% Similarity=0.066 Sum_probs=101.3
Q ss_pred HHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhhhhhhhhheecccccccch
Q 015075 263 FIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSA 342 (413)
Q Consensus 263 ~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~ 342 (413)
....++..++.++.|+++||+|||+.+..+.+...+..+.....++........+..+++.....+....+..|.+|++.
T Consensus 44 ~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~ 123 (485)
T TIGR00711 44 TSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEK 123 (485)
T ss_pred HHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHH
Confidence 34556667788999999999999999888777666555444444444333333444444444455677888999999999
Q ss_pred hhhHHHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHhhcccccccC
Q 015075 343 RTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETMG 401 (413)
Q Consensus 343 r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~et~~ 401 (413)
|+.+.++......++..++|.+.+.+.+..++...+++...+.++..+...++.||++.
T Consensus 124 r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~ 182 (485)
T TIGR00711 124 RGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPRDKP 182 (485)
T ss_pred HHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHHHcCCccc
Confidence 99999999999999999999998888877776666766666666666666666666544
No 141
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.12 E-value=3.1e-09 Score=101.64 Aligned_cols=139 Identities=18% Similarity=0.114 Sum_probs=97.1
Q ss_pred HHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhhhhhhhhheecccccccch
Q 015075 263 FIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSA 342 (413)
Q Consensus 263 ~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~ 342 (413)
....++..++.++.|.++||+|||+.+..+.....+........++........+..+.......+..+.+..|.+|++.
T Consensus 55 ~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~ 134 (406)
T PRK15402 55 TAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEAD 134 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhH
Confidence 34555667788899999999999998887776665554444444433322222222222222333556777889999999
Q ss_pred hhhHHHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHhhcccccccC
Q 015075 343 RTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETMG 401 (413)
Q Consensus 343 r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~et~~ 401 (413)
|..+.++.+....++..++|.+.+.+.+..+....+++.+++.+++.+..++..||+++
T Consensus 135 ~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (406)
T PRK15402 135 AIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWRAMPETAG 193 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHhCCCCCc
Confidence 99999999888888889999988877776666677777777777766666666777754
No 142
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.10 E-value=2.1e-08 Score=96.15 Aligned_cols=124 Identities=15% Similarity=0.194 Sum_probs=86.3
Q ss_pred cchhhHhhhhcC-----ChHHHHHHHHHHHHHHHHHhhcc----cHHHHHHHHHHhhhcccch-hHHHHHHHhhccC--C
Q 015075 5 AYSWGIISDNYG-----RRKSFLGIAMVTSVAGLLSSFSP----NYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPV--S 72 (413)
Q Consensus 5 ~~~~g~l~Dr~G-----rr~~~~~~~~l~~~~~~~~~~a~----~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~--~ 72 (413)
.+++|.++|-+- ||+-++++.++..++.+..+..+ +.....++-++..+|.... ..+-+.+.|...+ +
T Consensus 41 Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~ 120 (433)
T PF03092_consen 41 KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVVLLFLASFGYAFADVAADALVVELARREPE 120 (433)
T ss_pred hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCc
Confidence 467899999773 55556666666655565555544 3555555556666665543 4445677777633 3
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHHH-HHhhcCCC
Q 015075 73 HRGRWMVALSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFALL-LFYGLAPE 128 (413)
Q Consensus 73 ~Rg~~~~~~~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~~-~~~~~~pE 128 (413)
.||...+.......+|.+++..+++.+.+..++|+.|.+.++...+.. ...+..+|
T Consensus 121 ~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~~~~~~~e 177 (433)
T PF03092_consen 121 SRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLIVALFLLEE 177 (433)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHHHHHHhhhh
Confidence 478888888889999999999999999999999999988876665543 34444454
No 143
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.09 E-value=8.6e-10 Score=104.16 Aligned_cols=125 Identities=15% Similarity=0.167 Sum_probs=101.7
Q ss_pred cccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHHHHH
Q 015075 3 LGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVAL 81 (413)
Q Consensus 3 ~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~ 81 (413)
.+.++.|++.||+|||+.+..+.+...+...+..+.++.+.+++.++++|++.|.. +....+..|..|. +|++.++++
T Consensus 250 ~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~ 328 (375)
T TIGR00899 250 PFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGILAGIGMLYFQDLMPG-RAGAATTLY 328 (375)
T ss_pred HHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc-hhhHHHHHH
Confidence 35677899999999999988887776666666667788888888999999988764 5566788898875 567999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHHHHHhhcCCC
Q 015075 82 SAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFALLLFYGLAPE 128 (413)
Q Consensus 82 ~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~~~~~~~~pE 128 (413)
.....+|..+++.+++.+.+..||+..|++.++..++......+++|
T Consensus 329 ~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 375 (375)
T TIGR00899 329 TNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLLLIKD 375 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHheecC
Confidence 99999999999999999988899999999888877766665555543
No 144
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.09 E-value=5.4e-09 Score=98.11 Aligned_cols=134 Identities=13% Similarity=0.080 Sum_probs=91.2
Q ss_pred HHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcc-----hhHHHHHHHHHHHHHhhhhhhhhheeccc
Q 015075 262 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQ-----SAVVTTVLLFGVRMCVTGTITVATIYAPE 336 (413)
Q Consensus 262 ~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 336 (413)
..+..+...++.++.|+++||+|||+.+..+.+...+......... +.+......+....+.....+....+.+|
T Consensus 40 ~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~ 119 (365)
T TIGR00900 40 ALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPD 119 (365)
T ss_pred HHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3344556677888999999999999998877665444333222211 33333333333333333445567788999
Q ss_pred ccccchhhhHHHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHhhcc
Q 015075 337 IYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLF 395 (413)
Q Consensus 337 ~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (413)
.+|++.|+...|+.+....+|.+++|.+.+.+.+..+....+++..+..+++.+....+
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 178 (365)
T TIGR00900 120 LVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVSV 178 (365)
T ss_pred cCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999998888776666666666555555554444433
No 145
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.09 E-value=1.8e-09 Score=102.13 Aligned_cols=139 Identities=13% Similarity=0.138 Sum_probs=99.4
Q ss_pred HHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhhhhhhhhheecccccccch
Q 015075 263 FIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSA 342 (413)
Q Consensus 263 ~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~ 342 (413)
....+....+.++.|+++||+|||+.+..+.+...+........++........+...++.....+....+..|.+|++.
T Consensus 33 ~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~ 112 (377)
T PRK11102 33 SAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYMRFLHGLAAAAASVVINALMRDMFPKEE 112 (377)
T ss_pred HHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH
Confidence 34455667788999999999999999888777666555544444443333333333334433344556778899999999
Q ss_pred hhhHHHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHhhcccccccC
Q 015075 343 RTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETMG 401 (413)
Q Consensus 343 r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~et~~ 401 (413)
|+.+.++.+....+++.++|.+.+.+.+..+....+++.+++.++..+...+..||++.
T Consensus 113 ~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (377)
T PRK11102 113 FSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVFFFIPETLP 171 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHhCCccCc
Confidence 99999999999999999999998888776666667777777666666666555667643
No 146
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.09 E-value=4.5e-09 Score=103.29 Aligned_cols=118 Identities=21% Similarity=0.214 Sum_probs=85.6
Q ss_pred HHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhhhhhhhhheecccccccch
Q 015075 263 FIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSA 342 (413)
Q Consensus 263 ~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~ 342 (413)
....++..++.++.|+++||+|||+.+..+.+...+..+.....++........+..+++..+..+....+..|.+|++.
T Consensus 62 ~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~ 141 (496)
T PRK03893 62 SAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHL 141 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH
Confidence 34455667788999999999999998887776665555444444443333333333344444455666778899999999
Q ss_pred hhhHHHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHH
Q 015075 343 RTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVIL 380 (413)
Q Consensus 343 r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~ 380 (413)
|+.+.++.+....+|+.++|.+.+.+.+..++...+++
T Consensus 142 r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~ 179 (496)
T PRK03893 142 RNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFI 179 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHH
Confidence 99999999999999999999998888776666555543
No 147
>PRK03545 putative arabinose transporter; Provisional
Probab=99.09 E-value=6e-09 Score=99.12 Aligned_cols=136 Identities=7% Similarity=-0.005 Sum_probs=96.7
Q ss_pred HHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhhhhhhhhheecccccccchh
Q 015075 264 IASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSAR 343 (413)
Q Consensus 264 ~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r 343 (413)
...+...++.+..|.+.||+|||+.+..+.+...+........++.+...+..+..+.......+....+.+|.+|++.|
T Consensus 52 ~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r 131 (390)
T PRK03545 52 IYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKK 131 (390)
T ss_pred HHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhh
Confidence 33444556778889999999999999888776665555444444444333333333333333445566788999999999
Q ss_pred hhHHHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHhhcccccc
Q 015075 344 TTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFET 399 (413)
Q Consensus 344 ~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~et 399 (413)
+.+.|+......++..++|.+.+.+.+..++...+++.++++++..+......||.
T Consensus 132 ~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~ 187 (390)
T PRK03545 132 AQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLL 187 (390)
T ss_pred hhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999888777777777778877777766655555545554
No 148
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.09 E-value=4e-09 Score=101.83 Aligned_cols=137 Identities=13% Similarity=0.110 Sum_probs=95.2
Q ss_pred HHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhhhhhhhhheecccccccch
Q 015075 263 FIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSA 342 (413)
Q Consensus 263 ~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~ 342 (413)
....+...++.++.|++.||+|||+.+..+.+...+..+.....++........+...++.....+....+.+|.+|++.
T Consensus 65 ~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~ 144 (434)
T PRK11663 65 TLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTE 144 (434)
T ss_pred HHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHH
Confidence 34555667788999999999999998888777766655554444443332222222233333334556778899999999
Q ss_pred hhhHHHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHhhcccccc
Q 015075 343 RTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFET 399 (413)
Q Consensus 343 r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~et 399 (413)
|+++.|+.+....+|+.++|.+.+.+.+..+....+++.+++.++..+...+..||+
T Consensus 145 rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~~~~~~~~~~~ 201 (434)
T PRK11663 145 RGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVGLFLCWRLRDK 201 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 999999999999999999999888887777776677666665554434344344443
No 149
>PRK10504 putative transporter; Provisional
Probab=99.09 E-value=4.9e-09 Score=102.37 Aligned_cols=136 Identities=13% Similarity=0.063 Sum_probs=93.5
Q ss_pred HHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhhhhhhhhheecccccccchhh
Q 015075 265 ASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSART 344 (413)
Q Consensus 265 ~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~ 344 (413)
..+...++.++.|+++||+|||+.+..+.+...+..+.....++........+..+++.....+....+..|.+|++.|+
T Consensus 54 ~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~ 133 (471)
T PRK10504 54 YVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYM 133 (471)
T ss_pred HHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHH
Confidence 34455678889999999999999887765555444333333333333333333333444444566777889999999999
Q ss_pred hHHHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHhhccccccc
Q 015075 345 TGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETM 400 (413)
Q Consensus 345 ~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~et~ 400 (413)
.+.|+.+....++..++|.+.+.+.+..++...+.+......++.+......|+++
T Consensus 134 ~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~ 189 (471)
T PRK10504 134 AAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMPNYT 189 (471)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 99999999999999999999988888777666666655555555555555555543
No 150
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.09 E-value=4.5e-10 Score=105.89 Aligned_cols=117 Identities=17% Similarity=0.180 Sum_probs=98.4
Q ss_pred ccccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccH--HHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHH
Q 015075 2 LLGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNY--VSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWM 78 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~--~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~ 78 (413)
++|+++.|++.||+|||+.+..+.++..++.++..+.++. ..+++..++.|++.|.. +....++.|.+|+++||+..
T Consensus 254 ~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~ 333 (377)
T TIGR00890 254 GGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANY 333 (377)
T ss_pred HHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHh
Confidence 3678899999999999999999988888888877777653 33456678888877764 45567889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHH
Q 015075 79 VALSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFA 118 (413)
Q Consensus 79 ~~~~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~ 118 (413)
++.+....+|..+++.+.+.+.+..||++.|.+.++..++
T Consensus 334 g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~ 373 (377)
T TIGR00890 334 GFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALT 373 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHH
Confidence 9999999999999999999998889999999887766544
No 151
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.08 E-value=5.2e-09 Score=100.74 Aligned_cols=119 Identities=20% Similarity=0.210 Sum_probs=86.0
Q ss_pred HHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhhhhhhhhheecccccccc
Q 015075 262 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTS 341 (413)
Q Consensus 262 ~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~ 341 (413)
..+..++...+.++.|+++||+|||+.+..+.+...+........++........+..+++..+..+....+..|.+|++
T Consensus 59 ~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~ 138 (426)
T PRK12307 59 ATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKH 138 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHh
Confidence 33455666778999999999999999998877776655544444444333333333444444445566777889999999
Q ss_pred hhhhHHHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHH
Q 015075 342 ARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVIL 380 (413)
Q Consensus 342 ~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~ 380 (413)
.|+.+.++......+|.+++|.+.+.+.+..+....+++
T Consensus 139 ~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i 177 (426)
T PRK12307 139 LKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFV 177 (426)
T ss_pred HhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHH
Confidence 999999999998899999999888777776666555554
No 152
>PRK03699 putative transporter; Provisional
Probab=99.06 E-value=1.2e-08 Score=97.10 Aligned_cols=129 Identities=17% Similarity=0.271 Sum_probs=88.1
Q ss_pred HHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhhhhhhhhheecccccccchh
Q 015075 264 IASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSAR 343 (413)
Q Consensus 264 ~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r 343 (413)
...++..++.++.|++.||+|||+.+..+.+...+........++........+....+.....+....+..|.+|++.|
T Consensus 50 ~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r 129 (394)
T PRK03699 50 FLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQR 129 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchH
Confidence 44556677889999999999999988877766655544444444433333333333333333445566778999999999
Q ss_pred hhHHHHHHhhhhhhHhHHHHHHHHHhhc-cchhHHHHHHHHHHHHHHHHh
Q 015075 344 TTGFGVASSLGKVGGMVCPLVAVGLVTS-CHLRLAVILFEVVFVLAIASS 392 (413)
Q Consensus 344 ~~~~g~~~~~~~~~~~~~p~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~ 392 (413)
+.+.++.+....+++.++|.+.+.+.+. .++...+...+++.++..+..
T Consensus 130 ~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~~ 179 (394)
T PRK03699 130 GSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFILT 179 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHH
Confidence 9999999888888999999887776543 455666666666555444433
No 153
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.05 E-value=1.1e-09 Score=103.43 Aligned_cols=139 Identities=15% Similarity=0.100 Sum_probs=95.3
Q ss_pred HHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhhhhhhhhheecccccccc
Q 015075 262 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTS 341 (413)
Q Consensus 262 ~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~ 341 (413)
..+..+...++.++.|+++||+|||+.+..+.+...+..+.....++.....+..+...++.....+....+.+|.+|++
T Consensus 36 ~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 115 (379)
T TIGR00881 36 LSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRS 115 (379)
T ss_pred HHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHh
Confidence 33455666778899999999999999988887766655554444444333333333333444444566778999999999
Q ss_pred hhhhHHHHHHhhhhhhHhHHH-HHHHHHhhccchhHHHHHHHHHHHHHHHHhhccccccc
Q 015075 342 ARTTGFGVASSLGKVGGMVCP-LVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETM 400 (413)
Q Consensus 342 ~r~~~~g~~~~~~~~~~~~~p-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~et~ 400 (413)
.|+.+.++.+....+|+.++| .+...+.+..+....+++.+++.++..+...++.||++
T Consensus 116 ~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (379)
T TIGR00881 116 ERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVSLICFLLLRDSP 175 (379)
T ss_pred hheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHheeeCCCc
Confidence 999999999999999999999 45454545455556666666666555555555555543
No 154
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.05 E-value=8.2e-09 Score=100.18 Aligned_cols=139 Identities=16% Similarity=0.046 Sum_probs=86.5
Q ss_pred HHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhc----chhHHHHHHHHHHHHHhhhhhhhhheecccc
Q 015075 262 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFH----QSAVVTTVLLFGVRMCVTGTITVATIYAPEI 337 (413)
Q Consensus 262 ~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 337 (413)
.....+...++.++.|+++||+|||+.+..+.++..+..+.+.+. .+........+...++.....+.......|.
T Consensus 69 ~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~ 148 (452)
T PRK11273 69 LSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHW 148 (452)
T ss_pred HHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHh
Confidence 344555667789999999999999998888777665555444332 1222222223333333333334445567889
Q ss_pred cccchhhhHHHHHHhhhhhhHh-HHHHHHHHHhhccchhHHHHHHHHHHHHHHHHhhccccccc
Q 015075 338 YPTSARTTGFGVASSLGKVGGM-VCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETM 400 (413)
Q Consensus 338 ~p~~~r~~~~g~~~~~~~~~~~-~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~et~ 400 (413)
+|++.|+++.|+.+....+|+. .+|.....+....++...+++.+++.++..+...++.||+.
T Consensus 149 ~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~ 212 (452)
T PRK11273 149 WSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAFAMMRDTP 212 (452)
T ss_pred CChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHccCCH
Confidence 9999999999999888888764 45544332322234555666666666665555555556653
No 155
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.04 E-value=1.4e-08 Score=99.69 Aligned_cols=136 Identities=15% Similarity=0.106 Sum_probs=94.0
Q ss_pred HhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhhhhhhhhheeccccc-ccchhh
Q 015075 266 SLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIY-PTSART 344 (413)
Q Consensus 266 ~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-p~~~r~ 344 (413)
.++...+.+..|+++||+|||+.+..+.+...+..+.....++.......-...+++..+..+.......+.+ |++.|+
T Consensus 51 ~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~ 130 (495)
T PRK14995 51 SLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRN 130 (495)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 3344556788999999999999998877766555444444444443333333333333333344444455555 779999
Q ss_pred hHHHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHhhcccccccC
Q 015075 345 TGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETMG 401 (413)
Q Consensus 345 ~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~et~~ 401 (413)
.+.|+......+|..++|.+.+.+.+..++.+.+++...++++..+...++.||..+
T Consensus 131 ~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~ 187 (495)
T PRK14995 131 MALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQAG 187 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 999999999999999999999988888777777777666666666666666676543
No 156
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.03 E-value=9.8e-09 Score=99.00 Aligned_cols=125 Identities=16% Similarity=0.172 Sum_probs=81.4
Q ss_pred HhhhhhHHHHHHHHHHHh-ChhHHHHHHHHHHHHHHHHHHhcc-hhHHHHHHHHHHHHHhhhhhhhhheecccccccc--
Q 015075 266 SLAELPGLILSAIIVDKI-GRKLSMVLMFVSACIFLLPLVFHQ-SAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTS-- 341 (413)
Q Consensus 266 ~~~~~~g~~~~g~l~dr~-grr~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~-- 341 (413)
.....++.+++|+++||+ |||+.++.+.+...+..+.+.... +.......+...........+...++.+|.+|++
T Consensus 55 ~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~ 134 (493)
T PRK15462 55 CSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDP 134 (493)
T ss_pred HHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCc
Confidence 344566888999999998 999988877766554433333221 1111111111111111122244457789999986
Q ss_pred hhhhHHHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHH
Q 015075 342 ARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIA 390 (413)
Q Consensus 342 ~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 390 (413)
.|.++.++.++.+++|++++|.+.+.+.+..+.+..+...++..+++.+
T Consensus 135 ~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li 183 (493)
T PRK15462 135 RRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLV 183 (493)
T ss_pred cccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHH
Confidence 7999999999999999999999999887777766666655443344333
No 157
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.02 E-value=1.1e-08 Score=96.91 Aligned_cols=139 Identities=13% Similarity=0.073 Sum_probs=98.5
Q ss_pred HHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhhhhhhhhheecccccccc
Q 015075 262 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTS 341 (413)
Q Consensus 262 ~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~ 341 (413)
.....++..++.++.|++.||+|||+.+..+.+...+..+.....++.+......+...++.....+....+..|.+|++
T Consensus 44 ~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~ 123 (382)
T PRK10091 44 ISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPG 123 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChH
Confidence 34556677788999999999999999988887777665555444444443333333333333333344556778999999
Q ss_pred hhhhHHHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHhhccccccc
Q 015075 342 ARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETM 400 (413)
Q Consensus 342 ~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~et~ 400 (413)
.|+.+.++......++..++|.+.+.+.+..+....+.+.+++.++..+..++..||.+
T Consensus 124 ~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~lp~~~ 182 (382)
T PRK10091 124 KVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIYFWVPDIR 182 (382)
T ss_pred HhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 99999999988888999999988887777667777777777766666555555567754
No 158
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.01 E-value=1.6e-08 Score=96.31 Aligned_cols=140 Identities=14% Similarity=0.024 Sum_probs=92.4
Q ss_pred HHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhhhhhhhhheecccccccc
Q 015075 262 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTS 341 (413)
Q Consensus 262 ~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~ 341 (413)
.....+...++.++.|.++||+|||+.+..+.+...+........++........+...++.....+....+..|.+|.+
T Consensus 49 ~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 128 (394)
T PRK11652 49 MAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGT 128 (394)
T ss_pred HHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHH
Confidence 33455566778899999999999999888776665554444333333332222222222222222344556778899999
Q ss_pred hhhhHHHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHhhcccccccC
Q 015075 342 ARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETMG 401 (413)
Q Consensus 342 ~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~et~~ 401 (413)
.|+.+.++.+....++..++|.+.+.+.+..+....+.+.+++.++..+...++.||++.
T Consensus 129 ~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 188 (394)
T PRK11652 129 QLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPETRP 188 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCccCc
Confidence 999999998888888888999888877776666666666666555554555555677643
No 159
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.01 E-value=1.9e-08 Score=99.06 Aligned_cols=107 Identities=17% Similarity=0.181 Sum_probs=76.4
Q ss_pred HHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcch------hHHHHHHHHHHHHHhhhhhhhhheecc
Q 015075 262 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQS------AVVTTVLLFGVRMCVTGTITVATIYAP 335 (413)
Q Consensus 262 ~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (413)
.....++..++.++.|+++||+|||+.+..+++...+.........+ ........+..+++..+..+....+.+
T Consensus 62 ~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~ 141 (502)
T TIGR00887 62 NGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITS 141 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 44455667889999999999999999887766655544333332221 122333444444555556677889999
Q ss_pred cccccchhhhHHHHHHhhhhhhHhHHHHHHHHH
Q 015075 336 EIYPTSARTTGFGVASSLGKVGGMVCPLVAVGL 368 (413)
Q Consensus 336 e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l 368 (413)
|.+|++.|+.+.++.+....+|..+++.+...+
T Consensus 142 e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~ 174 (502)
T TIGR00887 142 EFATKKWRGAMMAAVFAMQGFGILAGAIVALIV 174 (502)
T ss_pred HhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999888888765533
No 160
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.01 E-value=1.9e-08 Score=95.93 Aligned_cols=133 Identities=16% Similarity=0.078 Sum_probs=89.7
Q ss_pred HhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhhhhhhhhheecccccccchhhh
Q 015075 266 SLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTT 345 (413)
Q Consensus 266 ~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~ 345 (413)
.+......++.|.++||+|||+.+..+.+...+..+.+...++.+......+...+......+...++..|.+|++.|++
T Consensus 56 ~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (400)
T PRK11646 56 QFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGR 135 (400)
T ss_pred HHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 34444557888999999999999888777766655555444443333222222222222233445677889999999999
Q ss_pred HHHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHhhcccccc
Q 015075 346 GFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFET 399 (413)
Q Consensus 346 ~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~et 399 (413)
+.|+.+...++|..++|.+.+.+. ..+....+++.++..+++.+...+..||.
T Consensus 136 a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~~~~~~~~~ 188 (400)
T PRK11646 136 FFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAFNAWLLPAY 188 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 999999999999999999988776 45555666666555555544444445554
No 161
>PRK11043 putative transporter; Provisional
Probab=99.00 E-value=1.6e-08 Score=96.49 Aligned_cols=138 Identities=17% Similarity=0.157 Sum_probs=93.8
Q ss_pred HHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhhhhhhhhheecccccccc
Q 015075 262 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTS 341 (413)
Q Consensus 262 ~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~ 341 (413)
..+..+...++.++.|+++||+|||+.+..+.+...+........++........+...++..........+..|.+|++
T Consensus 47 ~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~ 126 (401)
T PRK11043 47 LSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQ 126 (401)
T ss_pred HHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcH
Confidence 33445566778999999999999999988776665554444444333332222222222222223334556778999999
Q ss_pred hhhhHHHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHhhcccccc
Q 015075 342 ARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFET 399 (413)
Q Consensus 342 ~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~et 399 (413)
.++...+..+....+++.++|.+.+.+.+..+....+++.+++.++..+...+++||.
T Consensus 127 ~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (401)
T PRK11043 127 KANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLRLKPSK 184 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 9999999999888999999999988888877776777777666666655555555443
No 162
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.00 E-value=8.8e-09 Score=100.41 Aligned_cols=136 Identities=11% Similarity=0.052 Sum_probs=95.9
Q ss_pred HHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHh--cchhHHHHHHHHHHHHHhhhhhhhhheecccccccc
Q 015075 264 IASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVF--HQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTS 341 (413)
Q Consensus 264 ~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~ 341 (413)
...++..++.++.|++.||+|||+.+..+.+...+..+.... ..+.....+.-+..+++.....+....+.+|.+|++
T Consensus 84 ~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~ 163 (465)
T TIGR00894 84 SHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPK 163 (465)
T ss_pred HHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHH
Confidence 344566778899999999999999888777665544333221 122222233333333444445566778899999999
Q ss_pred hhhhHHHHHHhhhhhhHhHHHHHHHHHhhcc-chhHHHHHHHHHHHHHHHHhhcccccc
Q 015075 342 ARTTGFGVASSLGKVGGMVCPLVAVGLVTSC-HLRLAVILFEVVFVLAIASSLLFPFET 399 (413)
Q Consensus 342 ~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~et 399 (413)
.|+.+.|+.+....+|.+++|.+.+.+.+.. +....+++.+++.++..+..+++++|.
T Consensus 164 ~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~ 222 (465)
T TIGR00894 164 ERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADD 222 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999988887763 666777777777666656566555543
No 163
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.99 E-value=1.6e-08 Score=95.12 Aligned_cols=107 Identities=21% Similarity=0.288 Sum_probs=73.9
Q ss_pred HHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcc-hhHHHHHHHHHHHHHhhhhhhhhheecccccccc
Q 015075 263 FIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQ-SAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTS 341 (413)
Q Consensus 263 ~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~ 341 (413)
....+...++.++.|+++||+|||+.+..+.+...+..+...... +........+..... .+.......+.+|.+|++
T Consensus 44 ~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~ 122 (366)
T TIGR00886 44 AVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAVQSYSVLLLLRLFIGIA-GGSFASCMPWISFFFPKK 122 (366)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh-chhhHhHHHHHHHhcCHh
Confidence 445556677899999999999999998887776666554444433 333222222222222 233445567889999999
Q ss_pred hhhhHHHHHHhhhhhhHhHHHHHHHHHhh
Q 015075 342 ARTTGFGVASSLGKVGGMVCPLVAVGLVT 370 (413)
Q Consensus 342 ~r~~~~g~~~~~~~~~~~~~p~~~~~l~~ 370 (413)
.|+.+.++.....++|..+++.+.+.+..
T Consensus 123 ~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 151 (366)
T TIGR00886 123 IQGTALGLAAGWGNMGGGVAQFVMPPIIG 151 (366)
T ss_pred hhhHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 99999999998888888877777665543
No 164
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.99 E-value=1e-08 Score=96.37 Aligned_cols=136 Identities=13% Similarity=-0.051 Sum_probs=90.5
Q ss_pred HHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhhhhhhhhheecccccccchh
Q 015075 264 IASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSAR 343 (413)
Q Consensus 264 ~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r 343 (413)
...++..++.+..|+++||+|||++..................++.......-+...... +.........+|.+|++.|
T Consensus 34 ~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~-~~~~~~~~~~~~~~~~~~r 112 (368)
T TIGR00903 34 TYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLLACQLLAALGQ-PFLLNAFAPAASQIREERR 112 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhHh-HHHHHHHHHHHHHcCHHHH
Confidence 344556778889999999999998765443333222221121123222222222222222 2233344555899999999
Q ss_pred hhHHHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHhhccccccc
Q 015075 344 TTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETM 400 (413)
Q Consensus 344 ~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~et~ 400 (413)
+++.++.+....+|+.++|.+.+.+.+..++...+++.+++.++..+..++..||..
T Consensus 113 ~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~lp~~p 169 (368)
T TIGR00903 113 DLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVLAALPALP 169 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 999999999999999999998888877777777777777777777676776777754
No 165
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=98.98 E-value=8.6e-10 Score=106.98 Aligned_cols=118 Identities=16% Similarity=0.275 Sum_probs=92.7
Q ss_pred cccchhhHhhhhc--CChHHHHH--HHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchH
Q 015075 3 LGAYSWGIISDNY--GRRKSFLG--IAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRW 77 (413)
Q Consensus 3 ~G~~~~g~l~Dr~--Grr~~~~~--~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~ 77 (413)
+++++.|+++||. ++|+.... +.++.+++.++...+++++.+++.+++.|++.+.. +...+++.|..|+++||+.
T Consensus 291 ~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~ 370 (455)
T TIGR00892 291 FARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSA 370 (455)
T ss_pred HHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhH
Confidence 4566789999973 34433333 33444455566677889999999999999988765 5667888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCC-ChHHHHHHhhHHHHHHH
Q 015075 78 MVALSAFWTAGTIFEASLAWVVMTRL-NWRWLLAFSSVPSFALL 120 (413)
Q Consensus 78 ~~~~~~~~~~G~~~~~~l~~~l~~~~-~Wr~~f~~~~i~~~~~~ 120 (413)
.++++....+|..++|.+++.+.+.. +|++.|++.++..++..
T Consensus 371 ~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~ 414 (455)
T TIGR00892 371 VGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAG 414 (455)
T ss_pred HhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHH
Confidence 99999999999999999999888766 59999998877655443
No 166
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.97 E-value=1.3e-08 Score=98.41 Aligned_cols=139 Identities=14% Similarity=0.075 Sum_probs=90.1
Q ss_pred HHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhc----chhHHHHHHHHHHHHHhhhhhhhhheecccc
Q 015075 262 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFH----QSAVVTTVLLFGVRMCVTGTITVATIYAPEI 337 (413)
Q Consensus 262 ~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 337 (413)
..+..+...++.++.|+++||+|||+.+..+.+...+..+..... .+........+...++.....+.......|.
T Consensus 67 ~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~ 146 (438)
T TIGR00712 67 LSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHW 146 (438)
T ss_pred HHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHh
Confidence 344556667789999999999999998877666555544433221 1221122222222233323334455667899
Q ss_pred cccchhhhHHHHHHhhhhhhHhHHHHHHHHHhhc-cchhHHHHHHHHHHHHHHHHhhccccccc
Q 015075 338 YPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTS-CHLRLAVILFEVVFVLAIASSLLFPFETM 400 (413)
Q Consensus 338 ~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~et~ 400 (413)
+|++.|+++.|+.+....+++.++|.+.+...+. .++...+++.+++.++..+..+++.||+.
T Consensus 147 ~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~ 210 (438)
T TIGR00712 147 WSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMRDTP 210 (438)
T ss_pred cCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhccCCH
Confidence 9999999999999999999998888776654443 34556677777776666655666666653
No 167
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.97 E-value=2.3e-08 Score=97.41 Aligned_cols=130 Identities=15% Similarity=0.052 Sum_probs=87.7
Q ss_pred HHHHhhhhhHHHHHHHHHHH-hChhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhhhhhhhhheecccccccc
Q 015075 263 FIASLAELPGLILSAIIVDK-IGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTS 341 (413)
Q Consensus 263 ~~~~~~~~~g~~~~g~l~dr-~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~ 341 (413)
....+...++.+++|+++|| +|||+.+..+.+...+....+....+.............+.....+....+.+|.+|++
T Consensus 55 ~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~ 134 (475)
T TIGR00924 55 GAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERG 134 (475)
T ss_pred HHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCC
Confidence 34445667789999999999 89999988887776665554444333222222222222222223455667788888875
Q ss_pred ---hhhhHHHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHh
Q 015075 342 ---ARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASS 392 (413)
Q Consensus 342 ---~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 392 (413)
.|+.+.++.+...++|+.++|.+.+.+.+..+....+...++..+++.+..
T Consensus 135 ~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~~ 188 (475)
T TIGR00924 135 DMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLTF 188 (475)
T ss_pred CcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHH
Confidence 488899999999999999999999988877676666666555444443333
No 168
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=98.96 E-value=2.9e-07 Score=85.58 Aligned_cols=126 Identities=15% Similarity=0.170 Sum_probs=104.2
Q ss_pred chhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccchhHHHHHHHhhccCCCcchHHHHHHHHH
Q 015075 6 YSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGVPVFLAYFLEFVPVSHRGRWMVALSAFW 85 (413)
Q Consensus 6 ~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~ 85 (413)
++...+.|..|-|++++...+...+...+.-+.++...+-+.-+.-|++.+...+-.+|+--..|+++--++.+......
T Consensus 59 ~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~~yg~~~a~evay~sYiys~v~~~~yq~vts~~raa~ 138 (412)
T PF01770_consen 59 LPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQFFYGLATAAEVAYYSYIYSVVDKEHYQKVTSYTRAAT 138 (412)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHHHHHHHHHHheeecCHHHHHHHHHHHHHHH
Confidence 45578999999999999999999999999999999999999999999998877777788877788888888898888999
Q ss_pred HHHHHHHHHHHHHHhc--CCChHHHHHHhhHHHHHHHHHhhcCCCCch
Q 015075 86 TAGTIFEASLAWVVMT--RLNWRWLLAFSSVPSFALLLFYGLAPESPR 131 (413)
Q Consensus 86 ~~G~~~~~~l~~~l~~--~~~Wr~~f~~~~i~~~~~~~~~~~~pEsp~ 131 (413)
.+|..++.+++-.+.. ..+.+.++.+......+.+++.+++|..++
T Consensus 139 l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fLP~~~~ 186 (412)
T PF01770_consen 139 LVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFLPMPKR 186 (412)
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcCCCCc
Confidence 9999988888877654 556777777766555555666677776554
No 169
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=98.95 E-value=8e-09 Score=100.70 Aligned_cols=119 Identities=15% Similarity=0.152 Sum_probs=87.3
Q ss_pred ccccchhhHhhhhcCChHHHHHHHHHHHHHHH--HHhhcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHH
Q 015075 2 LLGAYSWGIISDNYGRRKSFLGIAMVTSVAGL--LSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWM 78 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~--~~~~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~ 78 (413)
++|.+++|+++||+|||+.+.....+..++.. .....++...+.+.+++.|+...+. ........|..|+++||++.
T Consensus 308 ~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~ 387 (467)
T PRK09556 308 LVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVAN 387 (467)
T ss_pred HHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHH
Confidence 46889999999999999887665444443332 2234456777778899888754332 23335667999999999999
Q ss_pred HHHHHHHHH-HHHHHHHHHHHHhc------------CCChHHHHHHhhHHHHHHH
Q 015075 79 VALSAFWTA-GTIFEASLAWVVMT------------RLNWRWLLAFSSVPSFALL 120 (413)
Q Consensus 79 ~~~~~~~~~-G~~~~~~l~~~l~~------------~~~Wr~~f~~~~i~~~~~~ 120 (413)
++.+....+ |..++|.+.+.+.+ ..||+..|++..+..++..
T Consensus 388 gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~ 442 (467)
T PRK09556 388 GIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCI 442 (467)
T ss_pred HHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHH
Confidence 999888776 77889988888887 5689999987655554433
No 170
>PRK03633 putative MFS family transporter protein; Provisional
Probab=98.94 E-value=6.7e-09 Score=98.45 Aligned_cols=121 Identities=20% Similarity=0.209 Sum_probs=94.6
Q ss_pred ccccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccc-hhHHHHHHHhhccCCCcchHHHH
Q 015075 2 LLGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGG-VPVFLAYFLEFVPVSHRGRWMVA 80 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~-~~~~~~~~~E~~p~~~Rg~~~~~ 80 (413)
++|+++.|++.||+|||+++..+..+..++.+... + ........++.|++.+. .|...+++.|..|+++++...+.
T Consensus 249 ~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~-~~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 325 (381)
T PRK03633 249 ILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S-QAAMAPALFILGAAGFTLYPVAMAWACEKVEHHELVAMNQA 325 (381)
T ss_pred HHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h-hHHHHHHHHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHH
Confidence 35788899999999999998888777776655433 2 23445577788876554 46777888899999988888888
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHHHHHhhc
Q 015075 81 LSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFALLLFYGL 125 (413)
Q Consensus 81 ~~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~~~~~~~ 125 (413)
+...+++|..++|.+++.+.++.+|++.|.+.+...++.....++
T Consensus 326 ~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~ 370 (381)
T PRK03633 326 LLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYLLMLLR 370 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHh
Confidence 888899999999999999999999999999877776655444433
No 171
>TIGR00898 2A0119 cation transport protein.
Probab=98.94 E-value=1.5e-08 Score=99.93 Aligned_cols=134 Identities=20% Similarity=0.175 Sum_probs=95.4
Q ss_pred HHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhhhhhhhhheecccccccc
Q 015075 262 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTS 341 (413)
Q Consensus 262 ~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~ 341 (413)
..+..++.+++.++.|+++||+|||+.+..+.++..+..+...+.++.....+..+..+++..+..+....+..|.+|++
T Consensus 133 ~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~ 212 (505)
T TIGR00898 133 QSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKK 212 (505)
T ss_pred HHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhhccchHHHHHHHhheecChh
Confidence 34555667889999999999999999988877776665555555555444444444444555555677889999999999
Q ss_pred hhhhHHHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHhhcccccc
Q 015075 342 ARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFET 399 (413)
Q Consensus 342 ~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~et 399 (413)
.|+.+.++......+|.+++|.+...+.+ +...+++.++..++..+.. ++.||+
T Consensus 213 ~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr~~~~~~~i~~~~~~~~~-~~~~es 266 (505)
T TIGR00898 213 QRAIVGTLIQVFFSLGLVLLPLVAYFIPD---WRWLQLAVSLPTFLFFLLS-WFVPES 266 (505)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHH-HhcCCC
Confidence 99999999988778888888877654433 4455666666666555555 456775
No 172
>PRK09952 shikimate transporter; Provisional
Probab=98.93 E-value=1.2e-08 Score=98.53 Aligned_cols=128 Identities=14% Similarity=0.129 Sum_probs=90.4
Q ss_pred cccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhh---c-ccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchH
Q 015075 3 LGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSF---S-PNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRW 77 (413)
Q Consensus 3 ~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~---a-~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~ 77 (413)
++.+++|+++||+|||+++..+.++..++.+.... . ++...+++.-++.|++.+.. +...+++.|.+|++.|+..
T Consensus 301 i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg 380 (438)
T PRK09952 301 LTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSG 380 (438)
T ss_pred HHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHH
Confidence 45668899999999999988776665554432222 2 23444455667777777654 5567888999999999988
Q ss_pred HHHH-HHHHHHHHHHHHHHHHHHhcC--CChHHHHHHhhHHHHHHHHHhhcCCCCc
Q 015075 78 MVAL-SAFWTAGTIFEASLAWVVMTR--LNWRWLLAFSSVPSFALLLFYGLAPESP 130 (413)
Q Consensus 78 ~~~~-~~~~~~G~~~~~~l~~~l~~~--~~Wr~~f~~~~i~~~~~~~~~~~~pEsp 130 (413)
.++. ..+..+|..++|.+.+.+.+. .+|+..+.+..+..++..+..+.++|+.
T Consensus 381 ~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~ 436 (438)
T PRK09952 381 AGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLMKDNQ 436 (438)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHccccc
Confidence 8874 445568888899888887663 3588888877776666655555666643
No 173
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=98.92 E-value=2.3e-08 Score=97.79 Aligned_cols=138 Identities=18% Similarity=0.100 Sum_probs=89.1
Q ss_pred HHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhc---------chh---HHHHHHHHHHHHHhhhhhhh
Q 015075 262 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFH---------QSA---VVTTVLLFGVRMCVTGTITV 329 (413)
Q Consensus 262 ~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~---------~~~---~~~~~~~~~~~~~~~~~~~~ 329 (413)
.....++..++.++.|+++||+|||+++..+.++..+..+..... .+. ....+.-+..+++..+..+.
T Consensus 61 ~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~ 140 (479)
T PRK10077 61 VASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASML 140 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhH
Confidence 344556677899999999999999999888766654433322211 111 11122333344455556677
Q ss_pred hheecccccccchhhhHHHHHHhhhhhhHhHHHHHHHHHh--------hccchhHHHHHHHHHHHHHHHHhhccccccc
Q 015075 330 ATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLV--------TSCHLRLAVILFEVVFVLAIASSLLFPFETM 400 (413)
Q Consensus 330 ~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~et~ 400 (413)
...+.+|.+|++.|+.+.++......+|..+++.+...+. +..++...+++.++..++..+. .++.||+.
T Consensus 141 ~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~-~~~l~~s~ 218 (479)
T PRK10077 141 SPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLML-LYFVPETP 218 (479)
T ss_pred HHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHH-HHcCCCCc
Confidence 8889999999999999999998888888888876544332 2234555666555555554444 44567764
No 174
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.92 E-value=1.5e-08 Score=100.31 Aligned_cols=136 Identities=19% Similarity=0.214 Sum_probs=106.9
Q ss_pred HHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhhhhhhhhheecccccccc
Q 015075 262 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTS 341 (413)
Q Consensus 262 ~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~ 341 (413)
..+..++.++|+++.|.++||+|||+++..++++..++.+...+..+.....++-+..+++..+...+.+.+..|+++++
T Consensus 124 ~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~ 203 (521)
T KOG0255|consen 124 QSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPK 203 (521)
T ss_pred HHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhHHhHhhheeecCcc
Confidence 34455667889999999999999999999999888887777677777776677778888888888889999999999999
Q ss_pred hhhhHHHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHhhcccccccC
Q 015075 342 ARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETMG 401 (413)
Q Consensus 342 ~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~et~~ 401 (413)
.|+.+..+ ..+...++...|....++.. ++...++...+..++..+. .+++||.++
T Consensus 204 ~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~-~~l~~Es~r 259 (521)
T KOG0255|consen 204 QRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLL-WFLPPESPR 259 (521)
T ss_pred hhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHH-HHccCcChH
Confidence 99999999 88888888888888887766 3444455555555544333 666778755
No 175
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=98.92 E-value=2.3e-08 Score=97.47 Aligned_cols=138 Identities=20% Similarity=0.139 Sum_probs=90.0
Q ss_pred HHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHh-cc--hhHHHHHHHHHHHHHhhhhhhhhheeccccc
Q 015075 262 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVF-HQ--SAVVTTVLLFGVRMCVTGTITVATIYAPEIY 338 (413)
Q Consensus 262 ~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 338 (413)
..+..++..++.++.|+++||+|||+.+..+.+...+....... .. +........+..+++.....+....+..|.+
T Consensus 77 ~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~ 156 (481)
T TIGR00879 77 VSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIA 156 (481)
T ss_pred HHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccC
Confidence 44555667788999999999999999888766655444333322 11 1112223333333444445566778899999
Q ss_pred ccchhhhHHHHHHhhhhhhHhHHHHHH---HHHhhccchhHHHHHHHHHHHHHHHHhhccccccc
Q 015075 339 PTSARTTGFGVASSLGKVGGMVCPLVA---VGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETM 400 (413)
Q Consensus 339 p~~~r~~~~g~~~~~~~~~~~~~p~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~et~ 400 (413)
|++.|+.+.++.+....+|.+++|.+. ..+.+..++...+++..+..++. +...++.||+.
T Consensus 157 ~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~-~~~~~~l~~~~ 220 (481)
T TIGR00879 157 PKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLL-FLGLFFLPESP 220 (481)
T ss_pred ChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHH-HHHHhcCCCCh
Confidence 999999999999999999999999887 43334445555666544444444 33444556763
No 176
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=98.92 E-value=7.2e-08 Score=89.15 Aligned_cols=137 Identities=12% Similarity=0.037 Sum_probs=109.5
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhhhhhhhhheeccccccc
Q 015075 261 DVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPT 340 (413)
Q Consensus 261 ~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~ 340 (413)
...+.++...++.++...+.||+.||++++..+....+..+...+..+.......-+...+.-...+++...+..++.|+
T Consensus 53 lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp 132 (394)
T COG2814 53 LITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPP 132 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCc
Confidence 34455666677889999999999999998876666655555545555544444445555556666778888999999999
Q ss_pred chhhhHHHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHhhcccc
Q 015075 341 SARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPF 397 (413)
Q Consensus 341 ~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (413)
+.|+.+.++.+.-..++.+++..+..++-+..++..+|+..+++++++.+..+..+|
T Consensus 133 ~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 133 GKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred cchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999888998888888888888889999999999999999888888887
No 177
>PRK15075 citrate-proton symporter; Provisional
Probab=98.92 E-value=6.3e-08 Score=93.50 Aligned_cols=99 Identities=14% Similarity=0.127 Sum_probs=67.4
Q ss_pred hhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHH--------HHHHHHHHHHHhhhhhhhhheecccccccc
Q 015075 270 LPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVV--------TTVLLFGVRMCVTGTITVATIYAPEIYPTS 341 (413)
Q Consensus 270 ~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~ 341 (413)
.+|.++.|++.||+|||+.+..+.+...+......+.++... ..+.-+..+++.....+....+.+|.+|++
T Consensus 70 ~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~ 149 (434)
T PRK15075 70 PLGAIVLGAYIDRVGRRKGLIVTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPG 149 (434)
T ss_pred hhHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcc
Confidence 467889999999999999998877766555554444333221 112222222222233445567899999999
Q ss_pred hhhhHHHHHHhhhhhhHhHHHHHHHHH
Q 015075 342 ARTTGFGVASSLGKVGGMVCPLVAVGL 368 (413)
Q Consensus 342 ~r~~~~g~~~~~~~~~~~~~p~~~~~l 368 (413)
.|+...++.+...+++..+++.+.+.+
T Consensus 150 ~rg~~~~~~~~~~~~g~~~g~~~g~~l 176 (434)
T PRK15075 150 RKGFYTSWQSASQQVAVVFAALLGYLL 176 (434)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999988888877777665543
No 178
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.91 E-value=4.8e-09 Score=94.35 Aligned_cols=105 Identities=14% Similarity=0.194 Sum_probs=79.3
Q ss_pred HHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhhhhhhhhheecccccccchhh
Q 015075 265 ASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSART 344 (413)
Q Consensus 265 ~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~ 344 (413)
.++.+.+.....|.++||+|||+++.+++++..++........+-...+..-+.. ....+-.++..++.+|+++++.|+
T Consensus 77 F~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~-Gi~kgnl~v~rAiisdV~sek~r~ 155 (451)
T KOG2615|consen 77 FSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLG-GIFKGNLSVIRAIISDVVSEKYRP 155 (451)
T ss_pred HHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hhccCchHHHHHHHHhhcChhhcc
Confidence 3456778889999999999999999998888877665544433321111111222 223345577889999999999999
Q ss_pred hHHHHHHhhhhhhHhHHHHHHHHHhh
Q 015075 345 TGFGVASSLGKVGGMVCPLVAVGLVT 370 (413)
Q Consensus 345 ~~~g~~~~~~~~~~~~~p~~~~~l~~ 370 (413)
.+++..+....+|-+++|.+.+++..
T Consensus 156 l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 156 LGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred ceeeeeehhhhcchhhcchhhhHHHh
Confidence 99999999999999999999998866
No 179
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=98.91 E-value=2.1e-08 Score=94.82 Aligned_cols=98 Identities=22% Similarity=0.375 Sum_probs=80.7
Q ss_pred ccccchhhHhhhhcCC-hHHHHHHHHHHHHHHHHH-h--h-cc-cHHHHHHHHHHhhhcccchhHHHHHHHhhccCCCcc
Q 015075 2 LLGAYSWGIISDNYGR-RKSFLGIAMVTSVAGLLS-S--F-SP-NYVSLVIFRCFVGVGLGGVPVFLAYFLEFVPVSHRG 75 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Gr-r~~~~~~~~l~~~~~~~~-~--~-a~-~~~~l~~~R~l~G~~~g~~~~~~~~~~E~~p~~~Rg 75 (413)
.++++++|+-..|.|. |+.++.+.++..++.++- + . .+ .-+.++++|++.|+|.|.....-+|++.-..+++|.
T Consensus 85 ~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~a~lR~Y~a~~s~~~dR~ 164 (488)
T KOG2325|consen 85 AIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNFAVLRAYIADASTVEDRP 164 (488)
T ss_pred HhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccHHHHHHHHHhccCccchH
Confidence 3678889999999996 666778888888887765 2 2 23 467889999999999988778889999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHH
Q 015075 76 RWMVALSAFWTAGTIFEASLAWVV 99 (413)
Q Consensus 76 ~~~~~~~~~~~~G~~~~~~l~~~l 99 (413)
++.+....+..+|.++||.+...+
T Consensus 165 rA~a~~~~~~vlg~ilGp~~q~~f 188 (488)
T KOG2325|consen 165 RAFAATSGGFVLGIILGPTIQLAF 188 (488)
T ss_pred HHHHHhhhHHHHHHHHhHHHHHHH
Confidence 999999888888888888776654
No 180
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.90 E-value=7.8e-08 Score=91.52 Aligned_cols=132 Identities=12% Similarity=0.017 Sum_probs=87.0
Q ss_pred HHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhhhhhhhhheecccccccchh
Q 015075 264 IASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSAR 343 (413)
Q Consensus 264 ~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r 343 (413)
...+......++.|.++||+|||+++..+.+...+..+......+. ....+..+.+.....+...++.+|++|++.|
T Consensus 46 ~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~ 122 (393)
T PRK11195 46 FFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGIHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKL 122 (393)
T ss_pred HHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHH
Confidence 3444556678899999999999999888776654433332222222 2222233344445567778899999999999
Q ss_pred hhHHHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHhhccccccc
Q 015075 344 TTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETM 400 (413)
Q Consensus 344 ~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~et~ 400 (413)
+.+.|+......++..++|.+.+.+.+.. ...++.+...+.+++.+ ..+..||.+
T Consensus 123 ~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~-~~~~~~i~~~~~~~~~~-~~~~l~~~~ 177 (393)
T PRK11195 123 VKANGWMEGSTIAAILLGTVLGGALADPH-AEAALAVCALIYLLAAL-FNLFIPRLG 177 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH-HHhcCCCCc
Confidence 99999999999999999999998887743 33333333333333333 334456654
No 181
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=98.89 E-value=1.3e-08 Score=96.44 Aligned_cols=118 Identities=9% Similarity=-0.008 Sum_probs=100.2
Q ss_pred cccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHHHHH
Q 015075 3 LGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVAL 81 (413)
Q Consensus 3 ~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~ 81 (413)
++.++.+.+.||+|+|+.+..+.+...+..++.++++|.+.+++.++++|++.|.. +....|+.+. |+++|++.++++
T Consensus 255 ~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~ 333 (382)
T TIGR00902 255 IIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALY 333 (382)
T ss_pred HHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHH
Confidence 34567789999999999999999999999999999999999999999999999875 6677888887 999999999998
Q ss_pred H-HHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHHHHH
Q 015075 82 S-AFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFALLLF 122 (413)
Q Consensus 82 ~-~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~~~~ 122 (413)
+ ..+.+|..+++.+++.+.++.|+ ..|+..+..+++..++
T Consensus 334 ~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 334 NALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 6 57789999999999999999997 4455555555544443
No 182
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.89 E-value=2.1e-07 Score=88.87 Aligned_cols=137 Identities=14% Similarity=0.100 Sum_probs=86.9
Q ss_pred HHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhc-----chhHHHHHHHHHHHHHhhhhhhhhheeccc
Q 015075 262 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFH-----QSAVVTTVLLFGVRMCVTGTITVATIYAPE 336 (413)
Q Consensus 262 ~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 336 (413)
..+..+...++.+..|++.||+|.|+++..+.+...+..+...+. ++......+.+...+. .+.++.....+++
T Consensus 76 ~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~ 154 (462)
T PRK15034 76 TALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISF 154 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHH
Confidence 334455555677788999999999988877776665544444332 2322222222222232 3345667778899
Q ss_pred ccccchhhhHHHHHHhhhhhhHhHHHHHHHHHh-----hc-------------cchhHHHHHHHHHHHHHHHHhhccccc
Q 015075 337 IYPTSARTTGFGVASSLGKVGGMVCPLVAVGLV-----TS-------------CHLRLAVILFEVVFVLAIASSLLFPFE 398 (413)
Q Consensus 337 ~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~-----~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~e 398 (413)
.+|++.|+++.|+....+++|..+++.+.+.+. +. .+...+.+++..+.++..+..+++.++
T Consensus 155 wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~ 234 (462)
T PRK15034 155 FFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMND 234 (462)
T ss_pred HCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 999999999999998888888776665554332 11 123345567777776666666666555
Q ss_pred c
Q 015075 399 T 399 (413)
Q Consensus 399 t 399 (413)
.
T Consensus 235 ~ 235 (462)
T PRK15034 235 I 235 (462)
T ss_pred c
Confidence 4
No 183
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.89 E-value=7.5e-08 Score=92.92 Aligned_cols=137 Identities=21% Similarity=0.095 Sum_probs=85.5
Q ss_pred HHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchh--------HHHHHHHHHHHHHhhhhhhhhheecc
Q 015075 264 IASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSA--------VVTTVLLFGVRMCVTGTITVATIYAP 335 (413)
Q Consensus 264 ~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (413)
...++..+|.++.|+++||+|||+.+..+.+...+..+...+.++. .....+-+..+++..+..+...++.+
T Consensus 71 ~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~ 150 (432)
T PRK10406 71 AGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMS 150 (432)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHH
Confidence 3344455889999999999999999888777766555544432221 11223333444444455677888999
Q ss_pred cccccchhhhHHHHHHhhhhhhHhHHHHHHHHHh--------hccchhHHHHHHHHHHHHHHHHhhcccccccC
Q 015075 336 EIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLV--------TSCHLRLAVILFEVVFVLAIASSLLFPFETMG 401 (413)
Q Consensus 336 e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~et~~ 401 (413)
|.+|++.|+...++.+.....|.++++.+...+. ...++...+++.++.+++. ++.....||++.
T Consensus 151 e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~-~~~~~~~~e~~~ 223 (432)
T PRK10406 151 EVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVA-LWLRRQLDETSQ 223 (432)
T ss_pred HhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHH-HHHHhcCCCCch
Confidence 9999999999888876665666666665433221 1345556666555544443 333344567643
No 184
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=98.88 E-value=2.5e-08 Score=91.39 Aligned_cols=140 Identities=14% Similarity=0.102 Sum_probs=109.7
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhhhhhhhhheecccccc
Q 015075 260 VDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYP 339 (413)
Q Consensus 260 ~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p 339 (413)
.......+..-++-.+.|.++||.+.|..+..+++++++..+.+.+.++.....++...-..+-...++.+......-+|
T Consensus 68 ~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfs 147 (448)
T COG2271 68 ILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFS 147 (448)
T ss_pred HHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcC
Confidence 33445556667789999999999999999999999999988888777655555555555555555566777888889999
Q ss_pred cchhhhHHHHHHhhhhhhHhHHHHHH--HHHhhccchhHHHHHHHHHHHHHHHHhhcccccc
Q 015075 340 TSARTTGFGVASSLGKVGGMVCPLVA--VGLVTSCHLRLAVILFEVVFVLAIASSLLFPFET 399 (413)
Q Consensus 340 ~~~r~~~~g~~~~~~~~~~~~~p~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~et 399 (413)
++.||+..++=|..-++|+.+.|.+. +.+..+.+....|+.=++++++..++.+++.+||
T Consensus 148 r~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~ 209 (448)
T COG2271 148 RKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDR 209 (448)
T ss_pred ccccCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999888 7666666667777777777777777777665444
No 185
>PRK10489 enterobactin exporter EntS; Provisional
Probab=98.86 E-value=8.6e-09 Score=98.98 Aligned_cols=129 Identities=16% Similarity=0.010 Sum_probs=106.2
Q ss_pred ccccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHHHH
Q 015075 2 LLGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVA 80 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~ 80 (413)
++|+++.+++.||.++|+.+..+.++.+++.++.++.++...+.++.++.|++.+.. +...+++.|..|++.||+.+++
T Consensus 273 ~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~ 352 (417)
T PRK10489 273 ALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGL 352 (417)
T ss_pred HHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHH
Confidence 357788899999988888888888888888888888898888888999999887654 4556788999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHH-HHHHhhcCCCCc
Q 015075 81 LSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFA-LLLFYGLAPESP 130 (413)
Q Consensus 81 ~~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~-~~~~~~~~pEsp 130 (413)
+.....+|..+++.+.+.+.+..|++..+++.+...++ ..+.....||.+
T Consensus 353 ~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (417)
T PRK10489 353 WTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVLGELR 403 (417)
T ss_pred HHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhccccc
Confidence 99999999999999999999989999988777666544 355555566654
No 186
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.84 E-value=6.7e-06 Score=75.86 Aligned_cols=101 Identities=17% Similarity=0.208 Sum_probs=71.1
Q ss_pred chhhHhhhhcC-----ChHHHHHHHH-HHHHHHHHHhhc-----c--------cH-H--HHHHHHHHhhhcccch-hHHH
Q 015075 6 YSWGIISDNYG-----RRKSFLGIAM-VTSVAGLLSSFS-----P--------NY-V--SLVIFRCFVGVGLGGV-PVFL 62 (413)
Q Consensus 6 ~~~g~l~Dr~G-----rr~~~~~~~~-l~~~~~~~~~~a-----~--------~~-~--~l~~~R~l~G~~~g~~-~~~~ 62 (413)
..+|+.+|+.+ ||..++.... +...+..+..++ . .+ + .....-.+.|+|.+.. ....
T Consensus 32 ~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~~g~~~a~l~F~l~G~G~~~s~T~~l 111 (403)
T PF03209_consen 32 VWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFWLGLALAALAFLLYGLGVHASGTSFL 111 (403)
T ss_pred HHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHhhHhHhHHHHH
Confidence 46899999999 8887655443 333333333221 1 22 2 2333445677777654 3455
Q ss_pred HHHHhhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcCCChH
Q 015075 63 AYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTRLNWR 106 (413)
Q Consensus 63 ~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~l~~~~~Wr 106 (413)
++++|..|+++|+++.++...+.-+|.++++.+.+.+.+.+.-.
T Consensus 112 ALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~ 155 (403)
T PF03209_consen 112 ALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPE 155 (403)
T ss_pred HHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHH
Confidence 78999999999999999999999999999999998887766533
No 187
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.84 E-value=1.2e-07 Score=92.65 Aligned_cols=112 Identities=12% Similarity=0.051 Sum_probs=76.5
Q ss_pred hhHHHHHHHHHHH-hChhHHHHHHHHHHHHHHHHHHhcch-hHHHHHHHHHHHHHhhhhhhhhheecccccccc--hhhh
Q 015075 270 LPGLILSAIIVDK-IGRKLSMVLMFVSACIFLLPLVFHQS-AVVTTVLLFGVRMCVTGTITVATIYAPEIYPTS--ARTT 345 (413)
Q Consensus 270 ~~g~~~~g~l~dr-~grr~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~--~r~~ 345 (413)
....+++|+++|| +|||+++..+.+...+..+......+ .............+.....+....+..|.+|++ .|+.
T Consensus 64 ~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~ 143 (489)
T PRK10207 64 YGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDG 143 (489)
T ss_pred HHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhc
Confidence 3345689999999 99999998887766554444443322 111112222222333334455677889999887 4577
Q ss_pred HHHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHHH
Q 015075 346 GFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILF 381 (413)
Q Consensus 346 ~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~ 381 (413)
+.++.+...++|+.++|.+.+++.+..+++..|++.
T Consensus 144 ~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~ 179 (489)
T PRK10207 144 AFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLC 179 (489)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHH
Confidence 899999999999999999999888877766666554
No 188
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=98.82 E-value=1.4e-07 Score=90.12 Aligned_cols=113 Identities=7% Similarity=-0.013 Sum_probs=72.7
Q ss_pred HHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHH---Hhc-chhHHHHHHHHHHHHHhhhhhhhhheecccc
Q 015075 262 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPL---VFH-QSAVVTTVLLFGVRMCVTGTITVATIYAPEI 337 (413)
Q Consensus 262 ~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 337 (413)
.....+...++.++.|.+.||+|||+.+..+.+...+..... ... .+.............+..........+..|.
T Consensus 54 ~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~ 133 (402)
T TIGR00897 54 FTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYN 133 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHh
Confidence 345556677889999999999999998887766655443322 111 2222222222222222222223344566788
Q ss_pred cccchhhhHHHHHHhhhhhhH-hHHHHHHHHHhhccch
Q 015075 338 YPTSARTTGFGVASSLGKVGG-MVCPLVAVGLVTSCHL 374 (413)
Q Consensus 338 ~p~~~r~~~~g~~~~~~~~~~-~~~p~~~~~l~~~~~~ 374 (413)
+|++.|+.+.|+.+....+|. ..+|.+.+.+.+..+.
T Consensus 134 ~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~ 171 (402)
T TIGR00897 134 TKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGE 171 (402)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccch
Confidence 999999999999999988885 5788877777665553
No 189
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.81 E-value=2.3e-07 Score=90.62 Aligned_cols=136 Identities=15% Similarity=0.145 Sum_probs=90.3
Q ss_pred hhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHH---h--cchhHHHHHHHHHHHHHhhhhhhhhheecccccccch
Q 015075 268 AELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLV---F--HQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSA 342 (413)
Q Consensus 268 ~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~ 342 (413)
-.+.-++++|.++||+.||+.++.+-+...+....+. . ..+.+....+.+....+.....+...++.+|+.|++.
T Consensus 57 P~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~ 136 (524)
T PF05977_consen 57 PILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKED 136 (524)
T ss_pred HHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhh
Confidence 3344677899999999999998876655433222221 1 1233333344444444444445667889999999999
Q ss_pred hhhHHHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHhhcccccccCcc
Q 015075 343 RTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETMGRE 403 (413)
Q Consensus 343 r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~et~~~~ 403 (413)
-..++++.....++..+++|.+.|.++...+....+.+-++..+++.+......++.+.++
T Consensus 137 L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~~~~~~~~~ 197 (524)
T PF05977_consen 137 LPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRWKPPPPPSS 197 (524)
T ss_pred HHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccc
Confidence 9999999999999999999999998887776666665555555555444444444443333
No 190
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=98.76 E-value=3e-08 Score=94.01 Aligned_cols=113 Identities=14% Similarity=0.121 Sum_probs=85.5
Q ss_pred cccchhhHhhhhcCChHHHHHHHHHHHHHH--HHHhh--cccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchH
Q 015075 3 LGAYSWGIISDNYGRRKSFLGIAMVTSVAG--LLSSF--SPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRW 77 (413)
Q Consensus 3 ~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~--~~~~~--a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~ 77 (413)
+++++.|+++||+|||+.+.....+..+.. .+..+ .++.+.++...++.|++.+.. +...+++.|.+|+++|++.
T Consensus 270 ~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~ 349 (394)
T TIGR00883 270 ITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTG 349 (394)
T ss_pred HHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeE
Confidence 567789999999999998775554444333 22222 256777777888888877654 6677889999999999999
Q ss_pred HHH-HHHHHHHHHHHHHHHHHHHhcCCC-hHHHHHHhhHH
Q 015075 78 MVA-LSAFWTAGTIFEASLAWVVMTRLN-WRWLLAFSSVP 115 (413)
Q Consensus 78 ~~~-~~~~~~~G~~~~~~l~~~l~~~~~-Wr~~f~~~~i~ 115 (413)
.++ .+....+|..++|.+++.+.++.| |++.++.....
T Consensus 350 ~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~ 389 (394)
T TIGR00883 350 ASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAAL 389 (394)
T ss_pred eeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHH
Confidence 887 456677899899999999988888 98877665543
No 191
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.74 E-value=6.9e-08 Score=92.06 Aligned_cols=119 Identities=15% Similarity=0.138 Sum_probs=98.8
Q ss_pred cccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHHHH-
Q 015075 3 LGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVA- 80 (413)
Q Consensus 3 ~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~- 80 (413)
++.+..|++.||+|||+.+..+.++.++...+.+.++|.+.+++.++++|++.+.. .....+..|..|++.|+...+.
T Consensus 269 ~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~ 348 (396)
T TIGR00882 269 LIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIG 348 (396)
T ss_pred HHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHH
Confidence 34577899999999999999999988888888788899999999999999886543 3445667788888888887665
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHHHH
Q 015075 81 LSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFALLL 121 (413)
Q Consensus 81 ~~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~~~ 121 (413)
++....+|..+++.+++.+.+..||+..|.+.++..++..+
T Consensus 349 ~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~ 389 (396)
T TIGR00882 349 FQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTL 389 (396)
T ss_pred HHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHH
Confidence 67888999999999999999989999999988777665543
No 192
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.74 E-value=3.7e-08 Score=89.28 Aligned_cols=142 Identities=18% Similarity=0.130 Sum_probs=108.8
Q ss_pred HHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhhhhhhhhheecccccccc
Q 015075 262 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTS 341 (413)
Q Consensus 262 ~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~ 341 (413)
.-...+.++....+.|.+.||+|+|..++.+++......+.+.+..+.....+.-...............++.++.||.+
T Consensus 112 FaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsglamlAd~f~~d 191 (464)
T KOG3764|consen 112 FASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSGLAMLADVFPED 191 (464)
T ss_pred HHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhhHHHHHHHcccc
Confidence 34456677778889999999999999999998888777666666555443222222333333333445566788899887
Q ss_pred h-hhhHHHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHhhcccccccCcc
Q 015075 342 A-RTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETMGRE 403 (413)
Q Consensus 342 ~-r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~et~~~~ 403 (413)
. |+.++|+.-.+-.+|-.++|.+.+.+.+..+++.+|+++++++++.....++..+.++..+
T Consensus 192 ~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~ 254 (464)
T KOG3764|consen 192 NERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMDP 254 (464)
T ss_pred hhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccCc
Confidence 6 6999999999999999999999999999999999999999999988888887776665554
No 193
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.73 E-value=6.3e-07 Score=87.94 Aligned_cols=115 Identities=13% Similarity=0.078 Sum_probs=73.7
Q ss_pred HHHHHHHHHH-hChhHHHHHHHHHHHHHHHHHHhcch-hHHHHHHHHHHHHHhhhhhhhhheecccccccc--hhhhHHH
Q 015075 273 LILSAIIVDK-IGRKLSMVLMFVSACIFLLPLVFHQS-AVVTTVLLFGVRMCVTGTITVATIYAPEIYPTS--ARTTGFG 348 (413)
Q Consensus 273 ~~~~g~l~dr-~grr~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~--~r~~~~g 348 (413)
.+++|+++|| +|||+.+..+.+...+....+....+ .............+.....+....+..|.+|++ .|..+.+
T Consensus 74 ~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~ 153 (500)
T PRK09584 74 VAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFT 153 (500)
T ss_pred HHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcch
Confidence 4578999999 59999888877666544443333322 221112122222222223345557788999864 3456788
Q ss_pred HHHhhhhhhHhHHHHHHHHHhhccchhHHHHHHHHHHHH
Q 015075 349 VASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVL 387 (413)
Q Consensus 349 ~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~ 387 (413)
+.+...++|+.++|.+.+++.+..++...+.+..+..++
T Consensus 154 ~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i 192 (500)
T PRK09584 154 MYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLI 192 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHH
Confidence 889999999999999999888877766666655443333
No 194
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.72 E-value=1.7e-07 Score=90.50 Aligned_cols=127 Identities=15% Similarity=0.248 Sum_probs=104.4
Q ss_pred ccccchhhHhhhhcCCh--HHHHHHHHHHHHHHHHHhh--------cccHHHHHHHHHHhhhcccch-hHHHHHHHhhcc
Q 015075 2 LLGAYSWGIISDNYGRR--KSFLGIAMVTSVAGLLSSF--------SPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVP 70 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr--~~~~~~~~l~~~~~~~~~~--------a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p 70 (413)
++|++++|++.||+|.| +++..+++++.+..+.-.+ .++-+.+.+.=++.|+..|+. +..-++.+|..|
T Consensus 331 ~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP 410 (477)
T PF11700_consen 331 IIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIP 410 (477)
T ss_pred HHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCC
Confidence 47899999999999999 8988888888665555444 567778888999999999986 677799999999
Q ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHHHHhcCCC-hHHHHHHhhHHHHHHHHHhhcCCC
Q 015075 71 VSHRGRWMVALSAFWTAGTIFEASLAWVVMTRLN-WRWLLAFSSVPSFALLLFYGLAPE 128 (413)
Q Consensus 71 ~~~Rg~~~~~~~~~~~~G~~~~~~l~~~l~~~~~-Wr~~f~~~~i~~~~~~~~~~~~pE 128 (413)
+++.+...+++....-....+||.+.+.+.+..| =|+-+....+..++.+.+++++++
T Consensus 411 ~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~v~~ 469 (477)
T PF11700_consen 411 PGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFFVDV 469 (477)
T ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccc
Confidence 9999999999999999999999999998877665 777777666665555555555543
No 195
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.71 E-value=1.2e-07 Score=91.69 Aligned_cols=104 Identities=17% Similarity=0.267 Sum_probs=84.2
Q ss_pred ccccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcc-cHHHHHHHHHHhhhcccch-hHHHHHHHhhcc-------CC
Q 015075 2 LLGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSP-NYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVP-------VS 72 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~-~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p-------~~ 72 (413)
+++++++++++||+|||+.+..+.++..++.++..+.+ +...+++..++.|++.+.. +...++++|..| ++
T Consensus 271 ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (437)
T TIGR00792 271 LIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVR 350 (437)
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCcc
Confidence 36778899999999999999999888888777766653 5667778888889988764 555677777654 56
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCh
Q 015075 73 HRGRWMVALSAFWTAGTIFEASLAWVVMTRLNW 105 (413)
Q Consensus 73 ~Rg~~~~~~~~~~~~G~~~~~~l~~~l~~~~~W 105 (413)
++|...++.+....+|..+++.+.+.+.+..||
T Consensus 351 ~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~ 383 (437)
T TIGR00792 351 AEGLVYSVRTFVRKLGQALAGFLVGLILGIIGY 383 (437)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 679999999999999999999999988766665
No 196
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=98.71 E-value=3.5e-07 Score=87.07 Aligned_cols=124 Identities=9% Similarity=0.000 Sum_probs=84.9
Q ss_pred HHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhhhhhhhhheecccccccchh
Q 015075 264 IASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSAR 343 (413)
Q Consensus 264 ~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r 343 (413)
...++...+.++.|+++||+|||+++..+..+..+..+...+.++.......-+..+++.....+....+..|.+| +.|
T Consensus 52 ~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~ 130 (393)
T PRK09705 52 LPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRT 130 (393)
T ss_pred HHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccc
Confidence 3345566788899999999999999999888887776666555554433333333333333334445567788887 679
Q ss_pred hhHHHHHHhhhhhhHhHHHHHHHHHhhcc-chhHHHHHHHHHHHHH
Q 015075 344 TTGFGVASSLGKVGGMVCPLVAVGLVTSC-HLRLAVILFEVVFVLA 388 (413)
Q Consensus 344 ~~~~g~~~~~~~~~~~~~p~~~~~l~~~~-~~~~~~~~~~~~~~~~ 388 (413)
+.+.|+.......|+.+++.+.+.+.+.. ++...+.++.+..++.
T Consensus 131 ~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~ 176 (393)
T PRK09705 131 PLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVA 176 (393)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence 99999999888888888888887776654 4445555554444433
No 197
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.70 E-value=1e-08 Score=94.70 Aligned_cols=147 Identities=14% Similarity=0.024 Sum_probs=100.2
Q ss_pred HHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhhhhhhhhheecccccccc
Q 015075 262 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTS 341 (413)
Q Consensus 262 ~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~ 341 (413)
.....+...+...++|++.||+.||.++..+..+=.+..+.-.+...-+...++-...+..-.+..+++..+.+|++|..
T Consensus 74 ~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~ 153 (493)
T KOG1330|consen 74 QTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDD 153 (493)
T ss_pred hHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcch
Confidence 33445556678899999999999999887665544443333333333333333333333444556678889999999999
Q ss_pred hhhhHHHHHHhhhhhhHhHHHHHHHHHhhccc-hhHHHHHHHHHHHHHHHHhhcccccccCcchhhhh
Q 015075 342 ARTTGFGVASSLGKVGGMVCPLVAVGLVTSCH-LRLAVILFEVVFVLAIASSLLFPFETMGRELKDTV 408 (413)
Q Consensus 342 ~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~et~~~~l~~~~ 408 (413)
.|++..++.|.....|+.++-.+..++-+..+ +..++..-+++.++..++..++.+|+..+..+|..
T Consensus 154 ~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~~~~ 221 (493)
T KOG1330|consen 154 KRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPERGARDEVD 221 (493)
T ss_pred hhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCcccccccccc
Confidence 99999999999999888777555444444333 45677777888888878888787787765444433
No 198
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.70 E-value=1.3e-06 Score=80.34 Aligned_cols=139 Identities=19% Similarity=0.212 Sum_probs=96.8
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhc--chhHHHHHHHHHHHHHh-hhhhhhhheecc
Q 015075 259 YVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFH--QSAVVTTVLLFGVRMCV-TGTITVATIYAP 335 (413)
Q Consensus 259 ~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 335 (413)
.....+..+.+.+--+..|++.||+|-|+....++++..+-.+.+.+. +... ...+.+...... .+.+.+...+.+
T Consensus 52 ~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~~~-~~ll~~gll~G~~GasFav~m~~~s 130 (417)
T COG2223 52 GLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYPST-WQLLVIGLLLGLAGASFAVGMPNAS 130 (417)
T ss_pred HHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccCCch-HHHHHHHHHHhcccceehccccccc
Confidence 344555666666778899999999999988877777655544433332 2211 111222222222 234567788999
Q ss_pred cccccchhhhHHHHHHhhhhhhHhHHHHHHHHHhhccc---hhHHHHHHHHHHHHHHHHhhcccccc
Q 015075 336 EIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCH---LRLAVILFEVVFVLAIASSLLFPFET 399 (413)
Q Consensus 336 e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~et 399 (413)
+.||++.++++.|+.- .||+|..+...+.+.+....+ .+.+..++.+..+++.+..++...|.
T Consensus 131 ~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~ 196 (417)
T COG2223 131 FFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDV 196 (417)
T ss_pred ccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9999999999999999 999999998888887777766 66777888888887777777664433
No 199
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.68 E-value=1.7e-07 Score=91.71 Aligned_cols=128 Identities=18% Similarity=0.238 Sum_probs=93.8
Q ss_pred ccccchhhHhhhhcCChHHHHHHHHHHHHHHHH---Hhhc-ccHHHHHHHHHHhhhcccc-hhHHHHHHHhhccCCCcch
Q 015075 2 LLGAYSWGIISDNYGRRKSFLGIAMVTSVAGLL---SSFS-PNYVSLVIFRCFVGVGLGG-VPVFLAYFLEFVPVSHRGR 76 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~---~~~a-~~~~~l~~~R~l~G~~~g~-~~~~~~~~~E~~p~~~Rg~ 76 (413)
++|.+++|+++||+|||+.+....++..++.++ .+.+ ++...+.+.-+++.+..|. .+...++..+..|++.+++
T Consensus 273 iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t 352 (491)
T PRK11010 273 IVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSAT 352 (491)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHH
Confidence 468889999999999998877666554443322 2333 4555555555665554443 2445678889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHHHHHhhcCCCC
Q 015075 77 WMVALSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFALLLFYGLAPES 129 (413)
Q Consensus 77 ~~~~~~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~~~~~~~~pEs 129 (413)
..++.+....+|..+++++++.+.+..||+..|.+..+..++..+....++++
T Consensus 353 ~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~~~ 405 (491)
T PRK11010 353 QFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCRQT 405 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999888899999888999999988877776655555444443
No 200
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.66 E-value=9e-07 Score=96.02 Aligned_cols=134 Identities=13% Similarity=0.013 Sum_probs=85.5
Q ss_pred HHhhhhhHHHHHHHHHHHhChhHHHHHHHHH---HHHHHHHHHhcchhHHHHHHHHHHHHHhhhhhhhhheecccccccc
Q 015075 265 ASLAELPGLILSAIIVDKIGRKLSMVLMFVS---ACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTS 341 (413)
Q Consensus 265 ~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~ 341 (413)
..+..++..++.|.++||+|||+++...... ............+.+..+++.+..+.+.....+...++.+|++|++
T Consensus 61 ~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~ 140 (1140)
T PRK06814 61 FILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKD 140 (1140)
T ss_pred HHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCcc
Confidence 3444566788899999999999875331111 1111111112233444444444444555555677888999999999
Q ss_pred hhhhHHHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHhhcccccc
Q 015075 342 ARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFET 399 (413)
Q Consensus 342 ~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~et 399 (413)
.|+.++|+.++...+|.+++|.+.+.+.+..+....++...++.+++.++.+ ..||+
T Consensus 141 ~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 197 (1140)
T PRK06814 141 ELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVLGWLASL-FIPKT 197 (1140)
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHh-hCCCC
Confidence 9999999999999999999999999888766655444222333333333333 34454
No 201
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=98.65 E-value=2.5e-07 Score=87.80 Aligned_cols=115 Identities=12% Similarity=-0.013 Sum_probs=92.8
Q ss_pred cccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHHHHH
Q 015075 3 LGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVAL 81 (413)
Q Consensus 3 ~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~ 81 (413)
++.++.|++.||+|+|+.+..+.+...++.++.+++++.+.+++..++.|++.+.. +....++.+. +++++++..+.+
T Consensus 255 ~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 333 (382)
T PRK11128 255 LIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALY 333 (382)
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHH
Confidence 34567889999999999999999998888888889999999999999999998864 5566777775 677788888887
Q ss_pred H-HHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHH
Q 015075 82 S-AFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFAL 119 (413)
Q Consensus 82 ~-~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~ 119 (413)
. .....|..+++.+++.+.+.+|+. .++..+...++.
T Consensus 334 ~~~~~~~g~~ig~~i~G~l~~~~g~~-~~~~~~~~~~~~ 371 (382)
T PRK11128 334 SALAMGGSIAIMTVLSGFLYQHLGAG-VFWVMALVALPA 371 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccHH-HHHHHHHHHHHH
Confidence 5 566788899999999999988984 555555544443
No 202
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.65 E-value=1e-06 Score=86.34 Aligned_cols=126 Identities=16% Similarity=0.146 Sum_probs=76.8
Q ss_pred HHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhhhhhhhhheecccccccchh
Q 015075 264 IASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSAR 343 (413)
Q Consensus 264 ~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r 343 (413)
.-.+...++..+.|.++|.+|||..++.+.+...+-.+.....++.............. .+...+.....+|+.|.+.|
T Consensus 86 ~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~Gvg-aG~~~~~~~~isEl~p~k~R 164 (599)
T PF06609_consen 86 AWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVG-AGVQELAALAISELVPNKWR 164 (599)
T ss_pred HHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHh-hHHHHHHHHHHHHhcccchh
Confidence 34455666788899999999999998887776655444433333332222222222222 23334455568999999999
Q ss_pred hhHHHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHH
Q 015075 344 TTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIA 390 (413)
Q Consensus 344 ~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 390 (413)
..+.++.....-.....+|.+...+....++.+.++++.+...++.+
T Consensus 165 ~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~v 211 (599)
T PF06609_consen 165 GLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALV 211 (599)
T ss_pred hhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHH
Confidence 98887776544444446666665444444566666666655555433
No 203
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.63 E-value=8.1e-07 Score=83.34 Aligned_cols=129 Identities=17% Similarity=0.139 Sum_probs=83.7
Q ss_pred HHHHHHHHHHh-----ChhHHHH-HHHHHHHHHHHHHHhcc---hhHHHHHHHHHHHHHhhhhhhhhheecccccccchh
Q 015075 273 LILSAIIVDKI-----GRKLSMV-LMFVSACIFLLPLVFHQ---SAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSAR 343 (413)
Q Consensus 273 ~~~~g~l~dr~-----grr~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r 343 (413)
.++.|.++||+ |||+.++ .+.+...+....+.+.. +.+......+....+.........++.+|.+|++.|
T Consensus 38 ~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r 117 (356)
T TIGR00901 38 KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEEL 117 (356)
T ss_pred HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhh
Confidence 67899999997 8888754 44444444333333321 221222222222233333334567788999999999
Q ss_pred hhHHHHHHhhhhhhHhHHHHHHHHHhhccc--------hhHHHHHHHHHHHHHHHHhhcccccccC
Q 015075 344 TTGFGVASSLGKVGGMVCPLVAVGLVTSCH--------LRLAVILFEVVFVLAIASSLLFPFETMG 401 (413)
Q Consensus 344 ~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~et~~ 401 (413)
+.+.|+......+|.+++|.+.+.+....+ +...+++.+++.+++.+..++..||++.
T Consensus 118 ~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~~~~~~~e~~~ 183 (356)
T TIGR00901 118 GYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWTALLILPGLLVTLFLAKEPQE 183 (356)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHHhccCCCc
Confidence 999999999889999999988877766655 5566777777666666555555677643
No 204
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.62 E-value=2e-06 Score=82.20 Aligned_cols=108 Identities=19% Similarity=0.092 Sum_probs=74.7
Q ss_pred HHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHh---cchhHHHHHHHHHHHHHhhhhhhhhheeccccc
Q 015075 262 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVF---HQSAVVTTVLLFGVRMCVTGTITVATIYAPEIY 338 (413)
Q Consensus 262 ~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 338 (413)
.....++..++.+..|++.||+|||+.+..+.+...+....+.. .++........+..........+....+..++.
T Consensus 44 ~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~ 123 (410)
T TIGR00885 44 QSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMG 123 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHC
Confidence 34555566778899999999999999988877766554433221 122222223333333333334445556777889
Q ss_pred ccchhhhHHHHHHhhhhhhHhHHHHHHHHHh
Q 015075 339 PTSARTTGFGVASSLGKVGGMVCPLVAVGLV 369 (413)
Q Consensus 339 p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~ 369 (413)
|++.|+...++.+.+..+|+.++|.+.+.+.
T Consensus 124 ~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~ 154 (410)
T TIGR00885 124 PESTATRRLNLAQSFNPFGSIIGMVVAQQLI 154 (410)
T ss_pred CHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999998877664
No 205
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.62 E-value=1.5e-05 Score=75.61 Aligned_cols=95 Identities=14% Similarity=0.038 Sum_probs=76.9
Q ss_pred cccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHHHHH
Q 015075 3 LGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVAL 81 (413)
Q Consensus 3 ~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~ 81 (413)
+.+++.+.+.|+.|+|+.+.++...+....+..-+- |-+.+++.-.+.|+|.+.. .....|++|..+++.+.+-.++.
T Consensus 65 v~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~-N~y~~yfssallG~Gaallw~GqG~ylt~~st~~tie~Nisi~ 143 (461)
T KOG3098|consen 65 VSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFP-NSYYLYFSSALLGFGAALLWTGQGGYLTSNSTRETIERNISIF 143 (461)
T ss_pred HHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhc-chHHHHHHHHHhhhhHHheecccceehhhcCChhhHHHHHHHH
Confidence 567788999999999999999999888777655444 4566889999999998864 45568999999999999988888
Q ss_pred HHHHHHHHHHHHHHHHH
Q 015075 82 SAFWTAGTIFEASLAWV 98 (413)
Q Consensus 82 ~~~~~~G~~~~~~l~~~ 98 (413)
......+.++|+..-..
T Consensus 144 Wai~~~~li~Ggi~l~~ 160 (461)
T KOG3098|consen 144 WAIGQSSLIIGGIILFI 160 (461)
T ss_pred HHHHHHHHHhhhHhhee
Confidence 88888888777655443
No 206
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.60 E-value=1.6e-06 Score=94.17 Aligned_cols=109 Identities=12% Similarity=0.001 Sum_probs=76.1
Q ss_pred HHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHH---hcchhHHHHHHHHHHHHHhhhhhhhhheecccccc
Q 015075 263 FIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLV---FHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYP 339 (413)
Q Consensus 263 ~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p 339 (413)
.+..+..+++.++.|+++||+|||++++.+.++..+..+... ...+.+...+..++.+++.....+...++.+|++|
T Consensus 54 ~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~ 133 (1146)
T PRK08633 54 ALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVG 133 (1146)
T ss_pred HHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcC
Confidence 344445667888999999999999988876654433322211 12233333333333334444445667789999999
Q ss_pred cchhhhHHHHHHhhhhhhHhHHHHHHHHHhhc
Q 015075 340 TSARTTGFGVASSLGKVGGMVCPLVAVGLVTS 371 (413)
Q Consensus 340 ~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~ 371 (413)
++.|+.+.|+......+|.+++|.+.+.+.+.
T Consensus 134 ~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~ 165 (1146)
T PRK08633 134 KENLSRANGLLEAFTIVAILAGTALFSFLFES 165 (1146)
T ss_pred cccchhhhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999988877654
No 207
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=98.58 E-value=9.7e-09 Score=100.57 Aligned_cols=127 Identities=12% Similarity=0.121 Sum_probs=2.9
Q ss_pred cccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcc-------------------------------------------
Q 015075 3 LGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSP------------------------------------------- 39 (413)
Q Consensus 3 ~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~------------------------------------------- 39 (413)
+..++..++++|..|-+.+-.+.++.++++++.++=+
T Consensus 53 ~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~ 132 (539)
T PF03137_consen 53 VVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSS 132 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCccccccccccccccccccccccccccccCcccccccc
Confidence 3445667888887777788888888888888775410
Q ss_pred -------cHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcCC--------
Q 015075 40 -------NYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTRL-------- 103 (413)
Q Consensus 40 -------~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~l~~~~-------- 103 (413)
-+..++++.++.|+|.... +.+.+|+=|..++++-+...|+......+|+++|-++++.....+
T Consensus 133 ~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~ 212 (539)
T PF03137_consen 133 SSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPP 212 (539)
T ss_dssp -------------------SSS----------------------------------------------------------
T ss_pred ccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccc
Confidence 0345788999999998765 778899999999999999999999999999998888877653210
Q ss_pred --------------ChHHHHHHhhHHHHHHHHHhhcCCCC
Q 015075 104 --------------NWRWLLAFSSVPSFALLLFYGLAPES 129 (413)
Q Consensus 104 --------------~Wr~~f~~~~i~~~~~~~~~~~~pEs 129 (413)
.|..=|++.+...++..+.++..|++
T Consensus 213 ~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FPk~ 252 (539)
T PF03137_consen 213 DGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFPKK 252 (539)
T ss_dssp ----------------------------------------
T ss_pred cCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 26666666666666665556666654
No 208
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.56 E-value=6.6e-07 Score=81.30 Aligned_cols=115 Identities=27% Similarity=0.440 Sum_probs=91.7
Q ss_pred cccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhccc--HHHHHHHHHHhhhcccch-hHHHHHHHhhccC-CCcchHH
Q 015075 3 LGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPN--YVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPV-SHRGRWM 78 (413)
Q Consensus 3 ~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~--~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~-~~Rg~~~ 78 (413)
+++++.|.++||+|||+.+..+......+.++.++..+ ...+++.|+.+|++.|.. +...+++.|+.|+ ++|+...
T Consensus 54 ~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (338)
T COG0477 54 IGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAV 133 (338)
T ss_pred HHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHH
Confidence 45578999999999998888888766666777777777 999999999999998865 6778899999998 7788888
Q ss_pred HHHHH-HHHHHHHHHHHHHHHHhc--CCChHHHHHHhhHHHH
Q 015075 79 VALSA-FWTAGTIFEASLAWVVMT--RLNWRWLLAFSSVPSF 117 (413)
Q Consensus 79 ~~~~~-~~~~G~~~~~~l~~~l~~--~~~Wr~~f~~~~i~~~ 117 (413)
+.... ...+|.++++.++..+.. ..+||+.|........
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (338)
T COG0477 134 GLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALLGL 175 (338)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHH
Confidence 88887 577888888876666543 3689997666555543
No 209
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.56 E-value=7.8e-07 Score=87.78 Aligned_cols=138 Identities=22% Similarity=0.199 Sum_probs=95.1
Q ss_pred HHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhhhhhhhhheecccccccc
Q 015075 262 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTS 341 (413)
Q Consensus 262 ~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~ 341 (413)
.....++...|.++.|+++|++|||..+..+.+...+..+......+.....+.-+..+++..+...+...|.+|+-|++
T Consensus 95 ~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~ 174 (513)
T KOG0254|consen 95 TSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISEIAPAH 174 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhhcCChh
Confidence 44556677889999999999999999988877766655555555445444444444555555555667889999999999
Q ss_pred hhhhHHHHHHhhhhhhHhHHHHHHHHHhhcc--chhHHHHHHHHHHHHHHHHhhcccccccC
Q 015075 342 ARTTGFGVASSLGKVGGMVCPLVAVGLVTSC--HLRLAVILFEVVFVLAIASSLLFPFETMG 401 (413)
Q Consensus 342 ~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~et~~ 401 (413)
.|+.-.+.......+|..++ ++.++..+.. ++...+.+..+.+++-.+. .++.||+.+
T Consensus 175 ~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~pesp~ 234 (513)
T KOG0254|consen 175 IRGTLVSLYQLFITIGILLG-YCINYGTSKVYAGWRIPLGLALIPAVILALG-MLFLPESPR 234 (513)
T ss_pred hhHHHHHHHHHHHHHHHHHH-HHHhhhhccCCccHHHHHHHHHHHHHHHHHH-HHhCCCChH
Confidence 99999998888877666665 4555444432 3444555555555555555 666777744
No 210
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.55 E-value=6.5e-07 Score=85.15 Aligned_cols=118 Identities=15% Similarity=0.130 Sum_probs=86.7
Q ss_pred cccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhh------cccHHHHHHHHHHhhhcccch-hHHHHHHHhhccC-CCc
Q 015075 3 LGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSF------SPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPV-SHR 74 (413)
Q Consensus 3 ~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~------a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~-~~R 74 (413)
+|.++.|++.||+|+|+.+..+.++.+...+.... .++...+...-.+++++.|.. +...++..+..++ ++|
T Consensus 259 ~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 338 (390)
T TIGR02718 259 LGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQA 338 (390)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccch
Confidence 56788899999999999988776655332222211 234444555556666666654 4555666677766 889
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHHH
Q 015075 75 GRWMVALSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFALL 120 (413)
Q Consensus 75 g~~~~~~~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~~ 120 (413)
|+..+..+....+|..+++.+++.+.+..||+..|+..++..++..
T Consensus 339 g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~ 384 (390)
T TIGR02718 339 GTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAI 384 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998999999988776655543
No 211
>PTZ00207 hypothetical protein; Provisional
Probab=98.54 E-value=3.3e-06 Score=83.20 Aligned_cols=121 Identities=14% Similarity=0.132 Sum_probs=72.8
Q ss_pred HHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhc------chhHHHHHHHHHHHHHhhhhhhhhheecccccccchhhh
Q 015075 272 GLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFH------QSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTT 345 (413)
Q Consensus 272 g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~ 345 (413)
..++.|++.||+|||+++.++.+...+..+..... .+.+...+..+..+.+...........+.+.|| +.|+.
T Consensus 77 ~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~ 155 (591)
T PTZ00207 77 FLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGA 155 (591)
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHH
Confidence 45578999999999999988877766554444332 122222222222222222233345556788897 67999
Q ss_pred HHHHHHhhhhhhHhH-HHHHHHHHhhccchhHHHHHHHHHHHHHHHHhhcc
Q 015075 346 GFGVASSLGKVGGMV-CPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLF 395 (413)
Q Consensus 346 ~~g~~~~~~~~~~~~-~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (413)
+.|+......+|+.+ +|+....+.+ +....+++.+++.++..++...+
T Consensus 156 a~Gi~~~~~gLGsaI~~~l~~~l~~~--~~~~~fl~l~vl~~vv~ll~~~~ 204 (591)
T PTZ00207 156 VVAIMKTFTGLGSAILGSIQLAFFSD--NTSAYFFFLMSFALVVGILAIVF 204 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999875 4444343322 23345555666555544444443
No 212
>PRK10133 L-fucose transporter; Provisional
Probab=98.53 E-value=6.8e-06 Score=79.36 Aligned_cols=108 Identities=13% Similarity=0.069 Sum_probs=73.1
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHH---HhcchhHHHHHHHHHHHHHhhhhhhhhheecccc
Q 015075 261 DVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPL---VFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEI 337 (413)
Q Consensus 261 ~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 337 (413)
......++..++.++.|.++||+|||+++..+.+...+..+.. ...++........+..+++..........+..|.
T Consensus 66 ~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~ 145 (438)
T PRK10133 66 IQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVL 145 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHh
Confidence 3445556677889999999999999999888776665544332 2233333333333444444444445556666787
Q ss_pred cccchhhhHHHHHHhhhhhhHhHHHHHHHHH
Q 015075 338 YPTSARTTGFGVASSLGKVGGMVCPLVAVGL 368 (413)
Q Consensus 338 ~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l 368 (413)
.|.+.|....++.+....+|..++|.+...+
T Consensus 146 ~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l 176 (438)
T PRK10133 146 GPESSGHFRLNLAQTFNSFGAIIAVVFGQSL 176 (438)
T ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777777788999999999999999876544
No 213
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.51 E-value=6e-06 Score=78.15 Aligned_cols=129 Identities=14% Similarity=0.136 Sum_probs=88.6
Q ss_pred HhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhhhhhhhhheecccccccchhhh
Q 015075 266 SLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTT 345 (413)
Q Consensus 266 ~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~ 345 (413)
..+..+..+.+|+++||+|-|+++..+.+.-.++...+.+..+.....+.-+..+++-.... ....+....+|++.|++
T Consensus 72 ~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~r 150 (511)
T TIGR00806 72 PYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQR 150 (511)
T ss_pred HHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHH
Confidence 34556688899999999999999888877776666665554443333333333333333334 66778899999999999
Q ss_pred HHHHHHhhhhhhHhHHHHHHHHHhhccchhH--HH-HHHHHHHHHHHHHhhccc
Q 015075 346 GFGVASSLGKVGGMVCPLVAVGLVTSCHLRL--AV-ILFEVVFVLAIASSLLFP 396 (413)
Q Consensus 346 ~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~ 396 (413)
++|+.++...+|.++++.+.+. +...+... .. .+......++.++.+++|
T Consensus 151 atsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~~Ln~Isl~s~~~a~~~a~~LP 203 (511)
T TIGR00806 151 AAAYSRAAVLLGVFLSSVLGQL-LVTLGWISYSTLNIISLVFMTFSVFLALFLK 203 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHhcCchhHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999988876 34444321 11 233344456666677765
No 214
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.49 E-value=3.3e-06 Score=80.66 Aligned_cols=136 Identities=18% Similarity=0.154 Sum_probs=80.3
Q ss_pred HHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHh---cchhHHHHHHHHHHHHHhhhhhhhhheecccccccc
Q 015075 265 ASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVF---HQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTS 341 (413)
Q Consensus 265 ~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~ 341 (413)
..+++++|.+..++++||+|||..+....+......+.+.. .+........-+..+.......+....|..|+-|++
T Consensus 69 f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~ 148 (485)
T KOG0569|consen 69 FFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLTEISPKN 148 (485)
T ss_pred HHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcChhh
Confidence 34567789999999999999998777766555444333332 112222222233333333333455677889999999
Q ss_pred hhhhHHHHHHhhhhhhHhHHHHHH-HHHhhccchhHHHHHH-HHHHHHHHHHhhcccccccC
Q 015075 342 ARTTGFGVASSLGKVGGMVCPLVA-VGLVTSCHLRLAVILF-EVVFVLAIASSLLFPFETMG 401 (413)
Q Consensus 342 ~r~~~~g~~~~~~~~~~~~~p~~~-~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~et~~ 401 (413)
.||....+......+|-.++..+. +.++++...+.....+ .+.+++. ++.+...||+-+
T Consensus 149 ~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~-l~~l~~~PESPk 209 (485)
T KOG0569|consen 149 LRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQ-LALLPFLPESPK 209 (485)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHH-HHHHhcCCCCcc
Confidence 999988888888788777774433 3444433222222222 3333444 444445578743
No 215
>PRK09848 glucuronide transporter; Provisional
Probab=98.46 E-value=2e-06 Score=83.49 Aligned_cols=103 Identities=16% Similarity=0.125 Sum_probs=80.9
Q ss_pred cccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcc--cHHHHHHHHHHhhhcccch-hHHHHHHHhhccCC-------
Q 015075 3 LGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSP--NYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVS------- 72 (413)
Q Consensus 3 ~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~--~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~------- 72 (413)
+++++++++.||+|+|+++..+.++..++.++..+.+ +++.+++..++.|+|.+.. +...+...|..|.+
T Consensus 279 ~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r 358 (448)
T PRK09848 279 ASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVR 358 (448)
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCcc
Confidence 5677889999999999999999988888877776654 5677777788899988764 55566666766643
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCh
Q 015075 73 HRGRWMVALSAFWTAGTIFEASLAWVVMTRLNW 105 (413)
Q Consensus 73 ~Rg~~~~~~~~~~~~G~~~~~~l~~~l~~~~~W 105 (413)
++|...+..+....+|..+++.+.+.+.+..|+
T Consensus 359 ~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 359 IEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 458889999999999999998888776554443
No 216
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.45 E-value=6e-06 Score=77.43 Aligned_cols=109 Identities=10% Similarity=-0.029 Sum_probs=70.4
Q ss_pred HHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhhhhhhhhheecccccccc
Q 015075 262 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTS 341 (413)
Q Consensus 262 ~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~ 341 (413)
.....++..++.++.|+++||+|||+.+..+.+...+..... ..++........+...+......+....+..|.+| +
T Consensus 41 ~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~-~ 118 (355)
T TIGR00896 41 TALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFAGTALIGVGIAIINVLLPSLIKRDFP-Q 118 (355)
T ss_pred HHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHHHHHHHHHHHHHhccchHHHHHhCc-c
Confidence 344555667789999999999999999887765544433332 22232222222222222222223344556678886 5
Q ss_pred hhhhHHHHHHhhhhhhHhHHHHHHHHHhhcc
Q 015075 342 ARTTGFGVASSLGKVGGMVCPLVAVGLVTSC 372 (413)
Q Consensus 342 ~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~ 372 (413)
.|+.+.++.+....+|..++|.+.+.+.+..
T Consensus 119 ~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~ 149 (355)
T TIGR00896 119 RVGLMTGLYSMALMGGAALAAAATVPLAQHS 149 (355)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 7999999999988899999988877776543
No 217
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.43 E-value=1.3e-06 Score=80.42 Aligned_cols=128 Identities=21% Similarity=0.238 Sum_probs=105.1
Q ss_pred ccccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHHHH
Q 015075 2 LLGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVA 80 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~ 80 (413)
++|++++|++.||+|.|+++..+++++++..+..-+...-..+.++=.+.|...|+. ...-+|.++..|+++-|+..++
T Consensus 302 ~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFgl 381 (438)
T COG2270 302 ALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGL 381 (438)
T ss_pred HHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeeh
Confidence 478999999999999999999999999999888877777777777888999999986 5677999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCC-ChHHHHHHhhHHHHHHHHHhhcCCCC
Q 015075 81 LSAFWTAGTIFEASLAWVVMTRL-NWRWLLAFSSVPSFALLLFYGLAPES 129 (413)
Q Consensus 81 ~~~~~~~G~~~~~~l~~~l~~~~-~Wr~~f~~~~i~~~~~~~~~~~~pEs 129 (413)
+....-.++.++|.+.+.+.+.. +=|.-+....+..++.+.....+|+.
T Consensus 382 yaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 382 YALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEEeecCC
Confidence 99999999999999888876543 46665555455445555666666653
No 218
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.42 E-value=3.1e-06 Score=85.19 Aligned_cols=105 Identities=12% Similarity=0.071 Sum_probs=70.7
Q ss_pred HhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcc--------------------------------------
Q 015075 266 SLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQ-------------------------------------- 307 (413)
Q Consensus 266 ~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~-------------------------------------- 307 (413)
.++..++.++.+++.||.|||+.+.++.++..+..+.+...+
T Consensus 78 ~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~ 157 (633)
T TIGR00805 78 EIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQ 157 (633)
T ss_pred hHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccc
Confidence 345566788899999999999887766555444333222110
Q ss_pred -----------h-hH-HHHHHHHHHHHHhhhhhhhhheecccccccchhhhHHHHHHhhhhhhHhHHHHHHHHHhh
Q 015075 308 -----------S-AV-VTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVT 370 (413)
Q Consensus 308 -----------~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~ 370 (413)
+ .. ...+.-++.+++.....++...+..|.+|++.|+...|+.+....+|..+++.+.+.+.+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~ 233 (633)
T TIGR00805 158 CPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQ 233 (633)
T ss_pred cccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHh
Confidence 0 00 111122222233334456677899999999999999999999999999999988877664
No 219
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.42 E-value=1.3e-05 Score=77.24 Aligned_cols=139 Identities=12% Similarity=0.075 Sum_probs=85.3
Q ss_pred HHHHHhhhhhHHHHHHHHHH----HhChhHHHHHH-HHHHHHHHHHHHhcchh-----------------HHHHHHHHHH
Q 015075 262 VFIASLAELPGLILSAIIVD----KIGRKLSMVLM-FVSACIFLLPLVFHQSA-----------------VVTTVLLFGV 319 (413)
Q Consensus 262 ~~~~~~~~~~g~~~~g~l~d----r~grr~~~~~~-~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~ 319 (413)
..+..+.+++...+.|.++| |+|||+.++.. .....+.+..+.+..+. +.....+...
T Consensus 45 ~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~ll 124 (477)
T TIGR01301 45 WLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWIL 124 (477)
T ss_pred HHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHH
Confidence 34555666778888999999 59999987764 33333333333221110 1111112222
Q ss_pred HHHhhhhhhhhheecccccccchh--hhHHHHHHhhhhhhHhHHHHHHHHHh--hcc-------------chhHHHHHHH
Q 015075 320 RMCVTGTITVATIYAPEIYPTSAR--TTGFGVASSLGKVGGMVCPLVAVGLV--TSC-------------HLRLAVILFE 382 (413)
Q Consensus 320 ~~~~~~~~~~~~~~~~e~~p~~~r--~~~~g~~~~~~~~~~~~~p~~~~~l~--~~~-------------~~~~~~~~~~ 382 (413)
.++.....+..-++.+|+.|++.| +.+.+..+....+|+++++.+.+.+. +.. +....|.+-+
T Consensus 125 d~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a 204 (477)
T TIGR01301 125 DVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDI 204 (477)
T ss_pred HHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHH
Confidence 233444455667899999999866 57888888889999999987765431 100 1223455555
Q ss_pred HHHHHHHHHhhccccccc
Q 015075 383 VVFVLAIASSLLFPFETM 400 (413)
Q Consensus 383 ~~~~~~~~~~~~~~~et~ 400 (413)
++.+++.++..+..+|+.
T Consensus 205 ~~l~i~~l~t~~~v~E~~ 222 (477)
T TIGR01301 205 ILLAILTYIALSAVKENP 222 (477)
T ss_pred HHHHHHHHHHeeeeeccC
Confidence 666777777777778864
No 220
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.41 E-value=5.1e-06 Score=79.96 Aligned_cols=145 Identities=15% Similarity=0.135 Sum_probs=103.7
Q ss_pred cccCCCCChhHHHHHHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHH--HHHhcchhHHHHHHHHHHHHHhhh
Q 015075 248 LHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLL--PLVFHQSAVVTTVLLFGVRMCVTG 325 (413)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 325 (413)
++++..+.+.+. .....+.+++.+.+|++.||+|-|+++..+.++..+..+ ++......+...++-+..+++...
T Consensus 68 ~~ws~~~k~~i~---ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~ 144 (466)
T KOG2532|consen 68 YDWSSTEKGLIF---SSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGV 144 (466)
T ss_pred ecCCHHHHHHHH---HHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhH
Confidence 444444444333 233446677888999999999999988887776654433 333222323334445555555556
Q ss_pred hhhhhheecccccccchhhhHHHHHHhhhhhhHhHHHHHHHHHhhc-cchhHHHHHHHHHHHHHHHHhhcc
Q 015075 326 TITVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTS-CHLRLAVILFEVVFVLAIASSLLF 395 (413)
Q Consensus 326 ~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 395 (413)
.++....+.+.-.|++.|++..++..+..++|.+++-.+.+.+-+. .|+...++++++++++-.++.+++
T Consensus 145 ~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~ 215 (466)
T KOG2532|consen 145 LFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLF 215 (466)
T ss_pred HHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 6777888999999999999999999999999999888788888887 777888888888887665555444
No 221
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.35 E-value=2.4e-05 Score=74.73 Aligned_cols=131 Identities=16% Similarity=0.119 Sum_probs=83.5
Q ss_pred hhHHHHHHHHHHHh-----ChhHH-HHHHHHHHHHHHHHHHhcc---hhHHHHHHHHHHHHHhhhhhhhhheeccccccc
Q 015075 270 LPGLILSAIIVDKI-----GRKLS-MVLMFVSACIFLLPLVFHQ---SAVVTTVLLFGVRMCVTGTITVATIYAPEIYPT 340 (413)
Q Consensus 270 ~~g~~~~g~l~dr~-----grr~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~ 340 (413)
....++.|.++||+ |||+. +..+.+...+....+.+.. +.+....+.+...++.....+...++.+|..|+
T Consensus 46 ~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~ 125 (402)
T PRK11902 46 YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHP 125 (402)
T ss_pred HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence 45678899999999 88764 4444555444333333321 222222222222333333345567889999999
Q ss_pred chhhhHHHHHHhhhhhhHhHHHHHHHHHhhc-cchhHHHHHHHHHHHHHHHHhhcccccccC
Q 015075 341 SARTTGFGVASSLGKVGGMVCPLVAVGLVTS-CHLRLAVILFEVVFVLAIASSLLFPFETMG 401 (413)
Q Consensus 341 ~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~et~~ 401 (413)
+.|+.+.++......++..+++.+...+.+. .++...+++.+++.++..+.. +..||++.
T Consensus 126 ~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l~~-~~~~e~~~ 186 (402)
T PRK11902 126 EERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGALTT-LWAPEPEV 186 (402)
T ss_pred hhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHHHH-HhcCCCcc
Confidence 9999999999988888999988887777664 366667777676666554443 34566643
No 222
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.34 E-value=0.00016 Score=65.76 Aligned_cols=124 Identities=21% Similarity=0.181 Sum_probs=74.4
Q ss_pred cchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccchhHHH-H-HHHhhccCCCcchH-HHHH
Q 015075 5 AYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGVPVFL-A-YFLEFVPVSHRGRW-MVAL 81 (413)
Q Consensus 5 ~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~~~~~-~-~~~E~~p~~~Rg~~-~~~~ 81 (413)
+.+.|.++||+|||+.-+..+++++++.+ +-..+|+..++++|++.|++........ + ++.|.-.++.+... ...+
T Consensus 86 g~~~G~laD~~Grk~~cl~~cily~~scl-~k~~~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF 164 (354)
T PF05631_consen 86 GTFVGSLADRYGRKKACLLFCILYSLSCL-TKHSSNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTF 164 (354)
T ss_pred HHHHHHHHHhcCchHHHHHHHHHHHHHHH-HHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHH
Confidence 34668899999999999988888888886 5566899999999999999876543222 3 45676433322222 2222
Q ss_pred HHHHHHHH----HHHHHHHHHHhcCCC--hHHHHHHhhHHHHHHH-HHhhcCCCC
Q 015075 82 SAFWTAGT----IFEASLAWVVMTRLN--WRWLLAFSSVPSFALL-LFYGLAPES 129 (413)
Q Consensus 82 ~~~~~~G~----~~~~~l~~~l~~~~~--Wr~~f~~~~i~~~~~~-~~~~~~pEs 129 (413)
..+..++. +.+.+++-.+.+..+ -..+|....+..++.. ++...-+|+
T Consensus 165 ~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~EN 219 (354)
T PF05631_consen 165 SLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPEN 219 (354)
T ss_pred HHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhccccc
Confidence 21221332 222233333333333 4777877666555543 333344554
No 223
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.34 E-value=6.7e-07 Score=80.47 Aligned_cols=122 Identities=20% Similarity=0.200 Sum_probs=86.0
Q ss_pred ccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcc--cH--HHHHHHHHHhhhcccchhHHHHHHHhhccCCCcchHHH
Q 015075 4 GAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSP--NY--VSLVIFRCFVGVGLGGVPVFLAYFLEFVPVSHRGRWMV 79 (413)
Q Consensus 4 G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~--~~--~~l~~~R~l~G~~~g~~~~~~~~~~E~~p~~~Rg~~~~ 79 (413)
|.++.+++-||+|||++|..+.++++++.++..... |. .+++++|+....+ +.+++.|.-|.+|...|+...|
T Consensus 397 GlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~---fqvaYvYtPEVyPTavRatgvG 473 (528)
T KOG0253|consen 397 GLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGA---FQVAYVYTPEVYPTAVRATGVG 473 (528)
T ss_pred chhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhch---heEEEEecCcccchhhhhcchh
Confidence 678899999999999999999999999998776554 33 2456677654433 3455677789999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHHHHHhhcCCCC
Q 015075 80 ALSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFALLLFYGLAPES 129 (413)
Q Consensus 80 ~~~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~~~~~~~~pEs 129 (413)
.-..+.-+|.++.|+++ ...+..---.++..+++..+..+...++--|+
T Consensus 474 tcSsmaRIggI~~p~iA-~~~e~s~sl~i~vy~~~~ilagIavcffPiEt 522 (528)
T KOG0253|consen 474 TCSSMARIGGIFSPVIA-MRAELSTSLPIFVYGALFILAGIAVCFFPIET 522 (528)
T ss_pred hhhhHHhhhhhhhhHHH-HHhccceeehHHHHHHHHHHHHHHheeeeecc
Confidence 99999999999999988 33332223334444444333333333443354
No 224
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.24 E-value=1.6e-05 Score=75.46 Aligned_cols=122 Identities=16% Similarity=0.169 Sum_probs=92.9
Q ss_pred hhhHhhhhcCChHHHHHHHHHHHHHHHHHhhc-ccHHHHHH----HHHHhhhcccch-hHHHHHHHhhccCCCcchHHHH
Q 015075 7 SWGIISDNYGRRKSFLGIAMVTSVAGLLSSFS-PNYVSLVI----FRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVA 80 (413)
Q Consensus 7 ~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a-~~~~~l~~----~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~ 80 (413)
..+++..|+|.|+++.++.+.+.+=..+.+.. ++.+...+ .-.++|+..|.. .....|+.|..|++.|++.+++
T Consensus 262 ~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l 341 (400)
T PF03825_consen 262 FSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGL 341 (400)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHH
Confidence 45888999999999999999999988888887 45444333 345699998875 6778999999999999999999
Q ss_pred HHH-HHHHHHHHHHHHHHHHhcCCC------hHHHHHHhhHHHHHH-HHHhhcCCC
Q 015075 81 LSA-FWTAGTIFEASLAWVVMTRLN------WRWLLAFSSVPSFAL-LLFYGLAPE 128 (413)
Q Consensus 81 ~~~-~~~~G~~~~~~l~~~l~~~~~------Wr~~f~~~~i~~~~~-~~~~~~~pE 128 (413)
+.. ...+|..+|..+++.+.+.+| |...+.+.+...++. ++...+.+|
T Consensus 342 ~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~fk~ 397 (400)
T PF03825_consen 342 YSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVILFKP 397 (400)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 876 468999999999999987654 555666665555443 333333444
No 225
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.23 E-value=1e-05 Score=77.60 Aligned_cols=139 Identities=22% Similarity=0.281 Sum_probs=102.1
Q ss_pred HHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhhhhhhhhheecccccccchhh
Q 015075 265 ASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSART 344 (413)
Q Consensus 265 ~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~ 344 (413)
.++..+..+...|.++||+|||..+....+.+.+-...+.+.. ++... ............+...++++++-..+.|+
T Consensus 71 ~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~--~~~~~-~~~l~g~~~~~~s~~~a~vadis~~~~R~ 147 (463)
T KOG2816|consen 71 AGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG--YWFFL-LLGLSGGFSAIFSVGFAYVADISSEEERS 147 (463)
T ss_pred hHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH--HHHhh-hcccccchhhhhhhhhhheeeccchhHHH
Confidence 3455566788899999999999988776666554333333221 22111 22222223344566788999999999999
Q ss_pred hHHHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHhhcccccccCcchhh
Q 015075 345 TGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETMGRELKD 406 (413)
Q Consensus 345 ~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~et~~~~l~~ 406 (413)
...|+.+..-..+..++|...+++....+...++.+-.+..+++.+...+..||+..++.++
T Consensus 148 ~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~ 209 (463)
T KOG2816|consen 148 SSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKERS 209 (463)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCccccc
Confidence 99999999989999999999998888877777778888888888888889999997766554
No 226
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.23 E-value=4.3e-08 Score=95.14 Aligned_cols=138 Identities=16% Similarity=0.188 Sum_probs=87.8
Q ss_pred HHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcc---hhHHHHHHHHHHHHHhhhhhhhhheeccccc
Q 015075 262 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQ---SAVVTTVLLFGVRMCVTGTITVATIYAPEIY 338 (413)
Q Consensus 262 ~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 338 (413)
.....++..+|.++.|+++||+|||+.+..+.+...+..+...+.+ +.......-+..+++..+.......+..|..
T Consensus 52 ~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~ 131 (451)
T PF00083_consen 52 TSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIA 131 (451)
T ss_pred HHHHHhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 4455667788999999999999999988877766655444444443 3333333344445555566778899999999
Q ss_pred ccchhhhHHHHHHhhhhhhHhHHHHHHHHHhhccc--hhHHHHHHHHHHHHHHHHhhcccccc
Q 015075 339 PTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCH--LRLAVILFEVVFVLAIASSLLFPFET 399 (413)
Q Consensus 339 p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~et 399 (413)
|++.|+...++.+....+|..++..+.....+..+ .+-....++.+..+..+...++.||+
T Consensus 132 ~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~~~~pES 194 (451)
T PF00083_consen 132 PPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLRFFLPES 194 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999888888777777766654332211111 11122233333332334445667888
No 227
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.21 E-value=0.00032 Score=69.93 Aligned_cols=126 Identities=10% Similarity=0.080 Sum_probs=96.7
Q ss_pred cchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhc--------------------c-------------------------
Q 015075 5 AYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFS--------------------P------------------------- 39 (413)
Q Consensus 5 ~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a--------------------~------------------------- 39 (413)
..+..|.+-|.-|-+.+-.+.++++++++++++= +
T Consensus 149 i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 228 (735)
T KOG3626|consen 149 IIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKR 228 (735)
T ss_pred hHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccc
Confidence 4566788888888888889999999999988762 0
Q ss_pred ----c--H-HHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcC---C-----
Q 015075 40 ----N--Y-VSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTR---L----- 103 (413)
Q Consensus 40 ----~--~-~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~l~~~---~----- 103 (413)
+ + ..++++-++.|+|.... +.+.+|+=|....++-....++......+|+++|-.++.+.... +
T Consensus 229 ~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~ 308 (735)
T KOG3626|consen 229 EKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPI 308 (735)
T ss_pred cccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCC
Confidence 0 2 25677889999988764 77889999999999889999999999999999988888876431 1
Q ss_pred -----------ChHHHHHHhhHHHHHHHHHhhcCCCCc
Q 015075 104 -----------NWRWLLAFSSVPSFALLLFYGLAPESP 130 (413)
Q Consensus 104 -----------~Wr~~f~~~~i~~~~~~~~~~~~pEsp 130 (413)
-|+.=|++.+...++..+.++++|...
T Consensus 309 ~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk~l 346 (735)
T KOG3626|consen 309 GITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFPKEL 346 (735)
T ss_pred CCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCcccC
Confidence 266667777777777666667776553
No 228
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.20 E-value=3.2e-05 Score=67.73 Aligned_cols=121 Identities=16% Similarity=0.109 Sum_probs=87.4
Q ss_pred chhhHhhhhcCChHHHHHHHHHHHHHHHHHhhc-------ccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchH
Q 015075 6 YSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFS-------PNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRW 77 (413)
Q Consensus 6 ~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a-------~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~ 77 (413)
++.|.+.|++|+|.++.++.+...++..+...+ ++++.+.+.-++.|.+.+.. ........+.+| ++||++
T Consensus 54 ~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~v 132 (250)
T PF06813_consen 54 ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTV 132 (250)
T ss_pred HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCce
Confidence 678999999999999999999988888766543 46788888888888875543 333344457787 589999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHHHHHhhcCC
Q 015075 78 MVALSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFALLLFYGLAP 127 (413)
Q Consensus 78 ~~~~~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~~~~~~~~p 127 (413)
.++.-....++..+-..+...+.+...-+.+......|.++.+...+++.
T Consensus 133 vgilk~~~GLSaai~t~i~~~~f~~~~~~fll~la~~~~~v~l~~~~~vr 182 (250)
T PF06813_consen 133 VGILKGFFGLSAAIFTQIYSAFFGDDPSSFLLFLAVLPAVVCLVAMFFVR 182 (250)
T ss_pred ehhhhHHHHhHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhhee
Confidence 99999999888887666666665554456665666666655544444443
No 229
>PRK09669 putative symporter YagG; Provisional
Probab=98.20 E-value=2.9e-05 Score=75.24 Aligned_cols=103 Identities=12% Similarity=0.112 Sum_probs=75.8
Q ss_pred cccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhh--cccHHHHHHHHHHhhhcccch-hHHHHHHHhhcc-------CC
Q 015075 3 LGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSF--SPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVP-------VS 72 (413)
Q Consensus 3 ~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~--a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p-------~~ 72 (413)
++.+++++++||+|||+.+..+.+...+......+ ..+.+.+++..++.|++.+.. +...+.++|..+ ++
T Consensus 279 i~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r 358 (444)
T PRK09669 279 FGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRR 358 (444)
T ss_pred HHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcC
Confidence 56678899999999999998887766654433322 346777888889999988865 555667776654 23
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCh
Q 015075 73 HRGRWMVALSAFWTAGTIFEASLAWVVMTRLNW 105 (413)
Q Consensus 73 ~Rg~~~~~~~~~~~~G~~~~~~l~~~l~~~~~W 105 (413)
..|...+.......+|..+++.+++.+.+..|+
T Consensus 359 ~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 359 LDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 346677888888899999999988887665544
No 230
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.17 E-value=1.9e-05 Score=74.44 Aligned_cols=127 Identities=17% Similarity=0.162 Sum_probs=81.5
Q ss_pred HHHHHHHHHHH-hChhHHHHHHHHHHHHHHHHHHhcc--hhHHHHHHHHHHHHHhhhhhhhhheeccccccc--chhhhH
Q 015075 272 GLILSAIIVDK-IGRKLSMVLMFVSACIFLLPLVFHQ--SAVVTTVLLFGVRMCVTGTITVATIYAPEIYPT--SARTTG 346 (413)
Q Consensus 272 g~~~~g~l~dr-~grr~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~--~~r~~~ 346 (413)
..+++|+++|| +|+|+.++++.++..+--+.+.... ......+.+..+.......=+-......|++|+ ..|-.+
T Consensus 77 t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~g 156 (498)
T COG3104 77 TPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGG 156 (498)
T ss_pred HHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCC
Confidence 56889999999 5999888776665544333333331 111112222222222222223345566777765 237888
Q ss_pred HHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHhhccccc
Q 015075 347 FGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFE 398 (413)
Q Consensus 347 ~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 398 (413)
.++.+...++|++++|++.+++.+..++...|...++-..++.+..++..+.
T Consensus 157 Ft~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~ 208 (498)
T COG3104 157 FTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRH 208 (498)
T ss_pred ccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccch
Confidence 9999999999999999999999888887777777666666666665555433
No 231
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.16 E-value=6.2e-05 Score=73.59 Aligned_cols=103 Identities=14% Similarity=0.147 Sum_probs=74.3
Q ss_pred ccccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhh-----cccHHHHHHHHHHhhhcccch-hHHHHHHHhhcc-----
Q 015075 2 LLGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSF-----SPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVP----- 70 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~-----a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p----- 70 (413)
+++.+++++++||+|||+.+..+.++..++.+.... ..+.+.+++.-++.|++.+.. +...+++.|..+
T Consensus 280 ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~ 359 (473)
T PRK10429 280 LVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYK 359 (473)
T ss_pred HHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHh
Confidence 356788899999999999998888776655554432 345666677778888887764 455677777755
Q ss_pred --CCCcchHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 015075 71 --VSHRGRWMVALSAFWTAGTIFEASLAWVVMTRLN 104 (413)
Q Consensus 71 --~~~Rg~~~~~~~~~~~~G~~~~~~l~~~l~~~~~ 104 (413)
++..|...+......-+|..+++.+.+.+.+..|
T Consensus 360 tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~G 395 (473)
T PRK10429 360 LGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLIG 395 (473)
T ss_pred cCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 2334667788888888999999888887765443
No 232
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.14 E-value=1.4e-05 Score=75.00 Aligned_cols=121 Identities=10% Similarity=0.076 Sum_probs=98.5
Q ss_pred hhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHHHH-HHHH
Q 015075 7 SWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVA-LSAF 84 (413)
Q Consensus 7 ~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~-~~~~ 84 (413)
+..++-+|+|.|+.++++..+.++=.+++++++|.+.+.+.+.+.|+-.+.. .....|+.+.+|+|...+...+ .+..
T Consensus 278 ~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~ 357 (412)
T PF01306_consen 278 FSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFA 357 (412)
T ss_dssp HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTT
T ss_pred HHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHH
Confidence 4567899999999999999999999999999999999999999999988865 5677999999999988877776 4788
Q ss_pred HHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHHHH-HhhcCC
Q 015075 85 WTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFALLL-FYGLAP 127 (413)
Q Consensus 85 ~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~~~-~~~~~p 127 (413)
.++|..+.+++++.+.++.|.+..|++.+...+...+ ..+.++
T Consensus 358 ~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~ 401 (412)
T PF01306_consen 358 KQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLK 401 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-
T ss_pred HHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeec
Confidence 8999999999999999999999888777766655443 334443
No 233
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.14 E-value=2.7e-05 Score=75.94 Aligned_cols=127 Identities=20% Similarity=0.181 Sum_probs=91.3
Q ss_pred hhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHH--HHhhhhhhhhheecccccccchhhhH
Q 015075 269 ELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVR--MCVTGTITVATIYAPEIYPTSARTTG 346 (413)
Q Consensus 269 ~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~e~~p~~~r~~~ 346 (413)
....+.+.+.+.||+|.|.+++.+.+.+.+.++.-.+..+.+..++ .++.. ++....+....+++...| .+.|+.+
T Consensus 94 ~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~~~i~~l~l-t~gvi~G~G~~~~~~paiviv~~YF-~kkR~lA 171 (509)
T KOG2504|consen 94 YLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFATSLWQLYL-TFGVIGGLGLGLIYLPAVVILGTYF-EKKRALA 171 (509)
T ss_pred HHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhhHHHHHH-HHHHHhhccchhhhcchhhhhhhHh-HHHHHHH
Confidence 3455778899999999999999888877766665555555443222 22221 112222333444555555 5779999
Q ss_pred HHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHhhcccc
Q 015075 347 FGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPF 397 (413)
Q Consensus 347 ~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (413)
+|++.+-..+|.++-|.+.-++++..++..+.++++.+.+-..+....+.|
T Consensus 172 ~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp 222 (509)
T KOG2504|consen 172 TGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRP 222 (509)
T ss_pred HhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999999988888999999999999998888777777777766
No 234
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.14 E-value=8.6e-06 Score=79.27 Aligned_cols=127 Identities=17% Similarity=0.178 Sum_probs=93.1
Q ss_pred ccccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhh----------cccHHHHHHHHHHhhhcccch-hHHHHHHHhhcc
Q 015075 2 LLGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSF----------SPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVP 70 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~----------a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p 70 (413)
++|....+.+.+|++.|+++..+.++..++.+.... .++....+..-++++++.|.. .....++.|..|
T Consensus 302 i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p 381 (468)
T TIGR00788 302 LCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCP 381 (468)
T ss_pred HHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCC
Confidence 356777888889999999999999998887755431 134334555667788776643 455788999999
Q ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHHHHhcCCC-------hHHHH-HHhhHHHHHHHHHhhcCCC
Q 015075 71 VSHRGRWMVALSAFWTAGTIFEASLAWVVMTRLN-------WRWLL-AFSSVPSFALLLFYGLAPE 128 (413)
Q Consensus 71 ~~~Rg~~~~~~~~~~~~G~~~~~~l~~~l~~~~~-------Wr~~f-~~~~i~~~~~~~~~~~~pE 128 (413)
++++|...++.+...++|..+++.+++.+.+..| .++.. .++.++.++.+...+++|+
T Consensus 382 ~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~~~~~~~~~i~i~~~~~l~~l~~~~llP~ 447 (468)
T TIGR00788 382 SGCESSVFALLASILHLGSSVSGFLGVLLMETIGITCDNSNNLWLLILGHSLAPLLPLPLLHLLPR 447 (468)
T ss_pred CCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999998888866544 33332 3344444554555557886
No 235
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.11 E-value=1.8e-05 Score=72.61 Aligned_cols=108 Identities=12% Similarity=0.120 Sum_probs=81.6
Q ss_pred CccccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHHH
Q 015075 1 MLLGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMV 79 (413)
Q Consensus 1 ~~~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~ 79 (413)
+++|.++.+++.||+|+|+++..+.++..++.++....++...+ ..-++.|++.+.. |...+...|..|++ .++..+
T Consensus 191 ~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~~~-~~~~l~g~~~s~i~P~~~s~a~~~~~~~-~~~asa 268 (310)
T TIGR01272 191 AMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYVAM-WFVLALGLFNSIMFPTIFSLALNALGRH-TSQGSG 268 (310)
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhhhh-hhhhHH
Confidence 35788999999999999999888888777777666665554333 3445788887764 77778888877754 455666
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCChHHHHHH
Q 015075 80 ALSAFWTAGTIFEASLAWVVMTRLNWRWLLAF 111 (413)
Q Consensus 80 ~~~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~ 111 (413)
+. ....+|..+.|++.+.+.+..|-+..|++
T Consensus 269 i~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v 299 (310)
T TIGR01272 269 IL-CLAIVGGAIVPLLQGSLADCLGIQLAFAL 299 (310)
T ss_pred HH-HHHHhcchHHHHHHHHHHHhccchHHHHH
Confidence 65 45668889999999999888898888774
No 236
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.10 E-value=1.3e-06 Score=80.90 Aligned_cols=128 Identities=18% Similarity=0.075 Sum_probs=98.3
Q ss_pred ccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhccc-HH---HHHHHHHHhhh-cc-cchhHHHHHHHhhccCCCcchH
Q 015075 4 GAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPN-YV---SLVIFRCFVGV-GL-GGVPVFLAYFLEFVPVSHRGRW 77 (413)
Q Consensus 4 G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~-~~---~l~~~R~l~G~-~~-g~~~~~~~~~~E~~p~~~Rg~~ 77 (413)
|..+..++.|++|||+..+.+.+++++..+..+...| .. .++++-.+..+ +. |...+...+-+|.+|.+.||..
T Consensus 364 Gyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~ 443 (538)
T KOG0252|consen 364 GYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTC 443 (538)
T ss_pred ceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhh
Confidence 5566778999999999999999999999999999888 22 12222222222 11 2112223445799999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhc-----CCChHHHHHHhhHHHHHHHHHhhcCCCCch
Q 015075 78 MVALSAFWTAGTIFEASLAWVVMT-----RLNWRWLLAFSSVPSFALLLFYGLAPESPR 131 (413)
Q Consensus 78 ~~~~~~~~~~G~~~~~~l~~~l~~-----~~~Wr~~f~~~~i~~~~~~~~~~~~pEsp~ 131 (413)
.++...+.-+|.+++......+.+ ..+-|+.|++.+...++..+..+++|||..
T Consensus 444 hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~pEtk~ 502 (538)
T KOG0252|consen 444 HGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLIPETKG 502 (538)
T ss_pred hhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeEEeecccc
Confidence 999999999999999887777776 678999999988888888888888999865
No 237
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.03 E-value=0.0036 Score=58.64 Aligned_cols=115 Identities=19% Similarity=0.060 Sum_probs=72.5
Q ss_pred hhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccc-hhHHHHHHHhhccCCCcchHHHHHHHHH
Q 015075 7 SWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGG-VPVFLAYFLEFVPVSHRGRWMVALSAFW 85 (413)
Q Consensus 7 ~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~-~~~~~~~~~E~~p~~~Rg~~~~~~~~~~ 85 (413)
+.-++.+|+.-+.=.....+++.++.++.++++|.+.=+++-++.|++.|. ...-..+. ..+|+. ..+.+..+.
T Consensus 78 ~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~lt-~~y~~~----~l~~wssGT 152 (402)
T PF02487_consen 78 IAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSLT-HFYGKS----SLSAWSSGT 152 (402)
T ss_pred HhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHHH-HhcCcc----ccccccCCc
Confidence 345566766544445566667888889999999999888888999988774 33333333 345542 345667777
Q ss_pred HHHHHHHHHHHHHHhc-CCChHHHHHHhhHHHHHHHHHhhcC
Q 015075 86 TAGTIFEASLAWVVMT-RLNWRWLLAFSSVPSFALLLFYGLA 126 (413)
Q Consensus 86 ~~G~~~~~~l~~~l~~-~~~Wr~~f~~~~i~~~~~~~~~~~~ 126 (413)
..+.++|+..-..+.+ ...-|..+.+..+.+++..+.++++
T Consensus 153 G~aGl~Ga~~y~~lT~~g~s~~~tll~~~~lp~~~~~~~f~~ 194 (402)
T PF02487_consen 153 GGAGLVGALYYLGLTTLGLSPRTTLLIMLVLPAIFLLSYFFL 194 (402)
T ss_pred ChhhHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHh
Confidence 7777777765444444 2334777766665555554444443
No 238
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=97.99 E-value=0.00029 Score=64.86 Aligned_cols=106 Identities=16% Similarity=0.129 Sum_probs=76.3
Q ss_pred HHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHh---cchhHHHHHHHHHHHHHhhhhhhhhheecccccccc
Q 015075 265 ASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVF---HQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTS 341 (413)
Q Consensus 265 ~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~ 341 (413)
.-.+...+.+..+++.+|+|+|.-++.+..+..+.+..+.- ..+.......++..........+....++..+.|++
T Consensus 57 ff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~ 136 (422)
T COG0738 57 FFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPE 136 (422)
T ss_pred HHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCch
Confidence 33345667888999999999999998888777665554432 111122233334444444445566777889999998
Q ss_pred hhhhHHHHHHhhhhhhHhHHHHHHHHHhh
Q 015075 342 ARTTGFGVASSLGKVGGMVCPLVAVGLVT 370 (413)
Q Consensus 342 ~r~~~~g~~~~~~~~~~~~~p~~~~~l~~ 370 (413)
..+.-.++...+..+|++++|.+...++.
T Consensus 137 ~a~~rlnl~q~fn~lGa~~gp~~g~~lil 165 (422)
T COG0738 137 SAAFRLNLAQAFNGLGAILGPLLGSSLIL 165 (422)
T ss_pred hHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 88888999999999999999999887765
No 239
>PF13347 MFS_2: MFS/sugar transport protein
Probab=97.98 E-value=2.6e-05 Score=75.14 Aligned_cols=101 Identities=18% Similarity=0.352 Sum_probs=83.5
Q ss_pred ccccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcc--cHHHHHHHHHHhhhcccch-hHHHHHHHhhcc-------C
Q 015075 2 LLGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSP--NYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVP-------V 71 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~--~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p-------~ 71 (413)
+++.+++++++||+|||+++..+.++.+++.++..+.+ |.+.+++.-++.|++.|.. ....++++|..+ +
T Consensus 274 ~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~ 353 (428)
T PF13347_consen 274 IVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGR 353 (428)
T ss_pred HHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCC
Confidence 35678899999999999999999999999999988886 9999999999999998864 444566666554 3
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 015075 72 SHRGRWMVALSAFWTAGTIFEASLAWVVMTR 102 (413)
Q Consensus 72 ~~Rg~~~~~~~~~~~~G~~~~~~l~~~l~~~ 102 (413)
++.|...+.......+|..+++.+.+.+.+.
T Consensus 354 r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~ 384 (428)
T PF13347_consen 354 RREGMYFSVNSFFIKIGQGLAGAIVGLLLAL 384 (428)
T ss_pred CchHHHHHhhhhhhHHHHHHHHHHHHHHHHH
Confidence 4458888999999999999988887776543
No 240
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=97.94 E-value=0.00022 Score=62.53 Aligned_cols=107 Identities=14% Similarity=0.095 Sum_probs=63.7
Q ss_pred HHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHh--cc----hhHHHHHH-HHHHHHHhhhhhhhhheec
Q 015075 262 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVF--HQ----SAVVTTVL-LFGVRMCVTGTITVATIYA 334 (413)
Q Consensus 262 ~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~--~~----~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 334 (413)
.....++... ++..|.+.|+.|.|.+..++.+....-...+.. .. ...+...+ .+..........+.....+
T Consensus 43 ~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~ 121 (250)
T PF06813_consen 43 STAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTC 121 (250)
T ss_pred HHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHH
Confidence 3444555444 478899999999999888877766554433332 11 11122221 1111111111223344566
Q ss_pred ccccccchhhhHHHHHHhhhhhhHhHHHHHHHHHhh
Q 015075 335 PEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVT 370 (413)
Q Consensus 335 ~e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~ 370 (413)
.+.||. .||++.|+.-....+++.+-..+...+.+
T Consensus 122 ~~NFP~-~RG~vvgilk~~~GLSaai~t~i~~~~f~ 156 (250)
T PF06813_consen 122 VRNFPR-SRGTVVGILKGFFGLSAAIFTQIYSAFFG 156 (250)
T ss_pred HHhCcc-ccCceehhhhHHHHhHHHHHHHHHHHHcC
Confidence 789985 69999999999988887766665554444
No 241
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.85 E-value=0.0002 Score=69.42 Aligned_cols=140 Identities=14% Similarity=0.096 Sum_probs=99.5
Q ss_pred HHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhhhhhhhhheecccccccc
Q 015075 262 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTS 341 (413)
Q Consensus 262 ~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~ 341 (413)
..+..++.+++.+.++.+.||+.-.+.+..+.+.-.++.+.-...++.....++-+..+++-.+.++..-.+....|.++
T Consensus 87 ~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~ 166 (495)
T KOG2533|consen 87 DTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKS 166 (495)
T ss_pred HHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChh
Confidence 34556677889999999999999444444333333222222222334444455555666676777888888999999999
Q ss_pred hhhhHHHHHHhhhhhhHhHHHHHHHHHh------hccchhHHHHHHHHHHHHHHHHhhcccccccC
Q 015075 342 ARTTGFGVASSLGKVGGMVCPLVAVGLV------TSCHLRLAVILFEVVFVLAIASSLLFPFETMG 401 (413)
Q Consensus 342 ~r~~~~g~~~~~~~~~~~~~p~~~~~l~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~et~~ 401 (413)
.|+.-.|+-++...+|+++++++...+. ...++.+.|++-+++.++..+++++.+|+-..
T Consensus 167 e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~ 232 (495)
T KOG2533|consen 167 ERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPS 232 (495)
T ss_pred hhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChh
Confidence 9999999999999999999999887643 23456677888888888888778777775544
No 242
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.79 E-value=0.00018 Score=58.19 Aligned_cols=96 Identities=16% Similarity=0.163 Sum_probs=80.5
Q ss_pred cccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHHHHH
Q 015075 3 LGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVAL 81 (413)
Q Consensus 3 ~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~ 81 (413)
+.+++...+.+++|.|+.++++.+.+.+-.... +-++.+.++..-++.|++.+.. .....|+.|..+++.|++-.+++
T Consensus 52 ~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~~~~~~if 130 (156)
T PF05978_consen 52 ISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYPNSYTLYPASALLGFGAALLWTAQGTYLTSYSTEETIGRNTGIF 130 (156)
T ss_pred HHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHHHhhHHHHH
Confidence 456777889999999999999999888665543 5677888999999999999875 55668999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 015075 82 SAFWTAGTIFEASLAWVV 99 (413)
Q Consensus 82 ~~~~~~G~~~~~~l~~~l 99 (413)
......+.++|..+...+
T Consensus 131 w~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 131 WAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 888888888887776655
No 243
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=97.76 E-value=5.6e-05 Score=71.73 Aligned_cols=120 Identities=12% Similarity=0.078 Sum_probs=102.9
Q ss_pred chhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHHHHHHHH
Q 015075 6 YSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAF 84 (413)
Q Consensus 6 ~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~ 84 (413)
++.+.+.+|+||-+++.+++..+.+=-+..+..+|.|+.+-.-++||+..+.. ....+|++...||+.|..+.++++..
T Consensus 424 ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~ 503 (618)
T KOG3762|consen 424 FFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGI 503 (618)
T ss_pred HHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHH
Confidence 45688999999999999998888888888899999999999999999999875 67789999999999999999988754
Q ss_pred H-HHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHHHHHhhc
Q 015075 85 W-TAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFALLLFYGL 125 (413)
Q Consensus 85 ~-~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~~~~~~~ 125 (413)
. .+|--+|+++++.+.+.++=|..|.+.++.+++.+.....
T Consensus 504 f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~ 545 (618)
T KOG3762|consen 504 FHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFIS 545 (618)
T ss_pred hcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHHH
Confidence 4 7888889999999999999999998888777665544433
No 244
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=97.75 E-value=0.00051 Score=65.40 Aligned_cols=99 Identities=24% Similarity=0.364 Sum_probs=75.5
Q ss_pred cccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcc--cHHHHHHHHHHhhhcccch-hHHHHHH------HhhccCCC
Q 015075 3 LGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSP--NYVSLVIFRCFVGVGLGGV-PVFLAYF------LEFVPVSH 73 (413)
Q Consensus 3 ~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~--~~~~l~~~R~l~G~~~g~~-~~~~~~~------~E~~p~~~ 73 (413)
++.+++..+.+|+|||+++.++.+++.++.++.-+.+ +....++..++.++|.+.. +...+++ .||-..++
T Consensus 287 ~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R 366 (467)
T COG2211 287 IGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVR 366 (467)
T ss_pred HHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCC
Confidence 3567889999999999999999999999999998887 6888889999988877642 2223332 45655444
Q ss_pred c-chHHHHHHHHHHHHHHHHHHHHHHHhc
Q 015075 74 R-GRWMVALSAFWTAGTIFEASLAWVVMT 101 (413)
Q Consensus 74 R-g~~~~~~~~~~~~G~~~~~~l~~~l~~ 101 (413)
| |...+......=+|..++..+.++++.
T Consensus 367 ~eGi~~s~~tF~~K~g~ala~~~~g~~L~ 395 (467)
T COG2211 367 REGIVYSGMTFFRKLGLALAGFIPGWILG 395 (467)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4 777777788888888888766666543
No 245
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.71 E-value=0.05 Score=51.94 Aligned_cols=102 Identities=19% Similarity=0.161 Sum_probs=62.6
Q ss_pred HHHHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHH----HHHhcch---hHHHHHHHHHHHHHhhhhhh---hhh
Q 015075 262 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLL----PLVFHQS---AVVTTVLLFGVRMCVTGTIT---VAT 331 (413)
Q Consensus 262 ~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~----~~~~~~~---~~~~~~~~~~~~~~~~~~~~---~~~ 331 (413)
-.+.++.++.|+++..++.+|+|-.+.-..+......++. .+....+ ......++.++...=.|.++ ...
T Consensus 299 R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~ 378 (432)
T PF06963_consen 299 RGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVT 378 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHH
Confidence 3456667888999999999999976655444433322211 1222221 22222222222222233332 355
Q ss_pred eecccccccchhhhHHHHHHhhhhhhHhHHHH
Q 015075 332 IYAPEIYPTSARTTGFGVASSLGKVGGMVCPL 363 (413)
Q Consensus 332 ~~~~e~~p~~~r~~~~g~~~~~~~~~~~~~p~ 363 (413)
-+..|..|.+.|+.-.|+-++..++...+.-.
T Consensus 379 qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~ 410 (432)
T PF06963_consen 379 QIMQENVPESERGAVSGVQNSLQSLFELLSFV 410 (432)
T ss_pred HhhcccCCHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 67889999999999999999999887766543
No 246
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=97.68 E-value=0.00048 Score=69.28 Aligned_cols=118 Identities=18% Similarity=0.228 Sum_probs=86.5
Q ss_pred cchhhHhhh-hcCChHHHHHHHHHHHHHHHHHhhccc--------HHHHHHHHHHhhhcccch-hHHHHHHHhhccCCC-
Q 015075 5 AYSWGIISD-NYGRRKSFLGIAMVTSVAGLLSSFSPN--------YVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSH- 73 (413)
Q Consensus 5 ~~~~g~l~D-r~Grr~~~~~~~~l~~~~~~~~~~a~~--------~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~- 73 (413)
.++.|+++| ++||++.+.++.++..++..+.+++.. ....+++=.+..+|.|+. |...+...|.+++++
T Consensus 40 pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~ 119 (654)
T TIGR00926 40 PLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQL 119 (654)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccch
Confidence 467799999 799999999999999998888776421 123455666666778776 777788888877653
Q ss_pred --cchHHHHHHHHHHHHHHHHHHHHHHHhcC-------CChHHHHHHhhHHHHHHHHH
Q 015075 74 --RGRWMVALSAFWTAGTIFEASLAWVVMTR-------LNWRWLLAFSSVPSFALLLF 122 (413)
Q Consensus 74 --Rg~~~~~~~~~~~~G~~~~~~l~~~l~~~-------~~Wr~~f~~~~i~~~~~~~~ 122 (413)
|-++..++..+.++|+++++.+...+.+. .+|...|.+.++..++.+++
T Consensus 120 ~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lv 177 (654)
T TIGR00926 120 SLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIV 177 (654)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHH
Confidence 45566677777788888887777766533 36999999888777655443
No 247
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=97.62 E-value=0.00025 Score=63.68 Aligned_cols=121 Identities=16% Similarity=0.175 Sum_probs=90.9
Q ss_pred hhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccchhHHHHHHHhhccCCCcchHHHHHHHHHHHHHH
Q 015075 11 ISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGVPVFLAYFLEFVPVSHRGRWMVALSAFWTAGTI 90 (413)
Q Consensus 11 l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~ 90 (413)
+.|..-=|++++.-.+.....+.+.-+.++.+.+-+.-+.-|...+...+-++|+-+..+|+++-++++.-......|..
T Consensus 65 LTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~tAaEIAYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~ 144 (433)
T KOG3810|consen 65 LTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPATAAEIAYYSYIYSKVDPEMYKRVTGYCRAAFLVGKF 144 (433)
T ss_pred HhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChHHHHHHhhhheeeeecCHHHHHHHHHHhHHHHHHHhH
Confidence 56766668888777777888888899999999999999999988777777778999999999999999988888888888
Q ss_pred HHHHHHHHHhc--CCChHHHHHHhhHHHHHHHHHhhcCCCCch
Q 015075 91 FEASLAWVVMT--RLNWRWLLAFSSVPSFALLLFYGLAPESPR 131 (413)
Q Consensus 91 ~~~~l~~~l~~--~~~Wr~~f~~~~i~~~~~~~~~~~~pEsp~ 131 (413)
.|..++-.+.. ..+.+.+-.+.-.-..+.....+++|.-+|
T Consensus 145 ~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~fLP~v~r 187 (433)
T KOG3810|consen 145 VGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLALFLPRVKR 187 (433)
T ss_pred HHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHhhCCCCch
Confidence 88877776653 344555444443333344555566665544
No 248
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=97.60 E-value=0.0031 Score=60.25 Aligned_cols=127 Identities=17% Similarity=0.155 Sum_probs=87.5
Q ss_pred hhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhhhhhhhhheecccccccchhhhH
Q 015075 267 LAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTTG 346 (413)
Q Consensus 267 ~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~ 346 (413)
.+.++..++.+++.+|+|+-+++..++....+=.+.+..-++.|..+-+=..........+...-.|.+...|++.|+++
T Consensus 417 ~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~ 496 (618)
T KOG3762|consen 417 AGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATA 496 (618)
T ss_pred cchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHH
Confidence 34566777889999999998887776665555444445555665544333333344444556666789999999999999
Q ss_pred HHHHHhhh-hhhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHhh
Q 015075 347 FGVASSLG-KVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSL 393 (413)
Q Consensus 347 ~g~~~~~~-~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (413)
.|+....- .+|--++.++.+.+....+....+.++++.+++..+...
T Consensus 497 Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~ 544 (618)
T KOG3762|consen 497 QGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFI 544 (618)
T ss_pred HHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHH
Confidence 99987764 355556677777777777767778888877776654444
No 249
>PRK11462 putative transporter; Provisional
Probab=97.55 E-value=0.0028 Score=61.74 Aligned_cols=138 Identities=14% Similarity=0.092 Sum_probs=76.6
Q ss_pred HHHHHhhhhhHHHHHHHHHHH----hChhHHHHH-HHHHHHHHHHHHHhcc----hh--HHHHHHHHHHHHHhhhhhhhh
Q 015075 262 VFIASLAELPGLILSAIIVDK----IGRKLSMVL-MFVSACIFLLPLVFHQ----SA--VVTTVLLFGVRMCVTGTITVA 330 (413)
Q Consensus 262 ~~~~~~~~~~g~~~~g~l~dr----~grr~~~~~-~~~~~~~~~~~~~~~~----~~--~~~~~~~~~~~~~~~~~~~~~ 330 (413)
..+.-+...+.-.+.|.++|| +|||+.++. +.+...+....+.... +. ....+.......+........
T Consensus 51 ~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy 130 (460)
T PRK11462 51 FLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPY 130 (460)
T ss_pred HHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHhccH
Confidence 344444555667788999997 588766543 4444444433333221 11 111111111122222222345
Q ss_pred heecccccc-cchhhhHHHHHHhhhhhhHhHHHHHHHHHhhccc-------hhHHHHHHHHHHHHHHHHhhcccccc
Q 015075 331 TIYAPEIYP-TSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCH-------LRLAVILFEVVFVLAIASSLLFPFET 399 (413)
Q Consensus 331 ~~~~~e~~p-~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~et 399 (413)
.++.+|+-+ ++.|+...+.-...+.+|+.+++.+...+....+ ......+++++++++.+++++..+|.
T Consensus 131 ~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~~i~~~~~kE~ 207 (460)
T PRK11462 131 CALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAFCFFTTKER 207 (460)
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHhcceec
Confidence 567788877 6889999999999889888888776554444322 12234555666555555555555554
No 250
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.12 E-value=0.075 Score=46.54 Aligned_cols=68 Identities=21% Similarity=0.346 Sum_probs=44.7
Q ss_pred hhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccch-hHHHH-HHHhhccCCCcchH
Q 015075 7 SWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLA-YFLEFVPVSHRGRW 77 (413)
Q Consensus 7 ~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~-~~~~~-~~~E~~p~~~Rg~~ 77 (413)
+.|-++|+-|||+.=+.-++.++++. ++-.+|.|-.++++|++-|++..-. +.--+ ++.|.- ++||.-
T Consensus 91 ivgSLaDkqGRKracvtycitYiLsC-iTKhSpqYkVLmVGR~LGGiaTsLLFSaFEsWliaEHn--ekr~Fe 160 (454)
T KOG4332|consen 91 IVGSLADKQGRKRACVTYCITYILSC-ITKHSPQYKVLMVGRVLGGIATSLLFSAFESWLIAEHN--EKRGFE 160 (454)
T ss_pred HHHHHHhhhccccceeeehHHHHHHH-HhhcCCceEEEeehhhhhhHHHHHHHHHHHHHHHHHhh--hccCCh
Confidence 44679999999996544444444333 2446788999999999999987653 33223 567765 344443
No 251
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=97.05 E-value=0.34 Score=46.94 Aligned_cols=95 Identities=13% Similarity=0.155 Sum_probs=64.4
Q ss_pred cchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhc--c--c---------------------------HHHHHHHHHHhhh
Q 015075 5 AYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFS--P--N---------------------------YVSLVIFRCFVGV 53 (413)
Q Consensus 5 ~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a--~--~---------------------------~~~l~~~R~l~G~ 53 (413)
.++.+++++|++|++.+-.....+...-.+.++. | + .|...++-+...+
T Consensus 61 ~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~el 140 (472)
T TIGR00769 61 MLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAEL 140 (472)
T ss_pred HHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHH
Confidence 3567999999999999877776666555554443 1 1 1111122222222
Q ss_pred cccc--hh-HHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHh
Q 015075 54 GLGG--VP-VFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVM 100 (413)
Q Consensus 54 ~~g~--~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~l~ 100 (413)
= |. .+ .-..+..|.+++++-.|..+++..+.++|.++++.+...+.
T Consensus 141 w-~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 141 W-GSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred H-HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 11 22 33577899999999999999999999999999998777765
No 252
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.03 E-value=0.0044 Score=54.47 Aligned_cols=108 Identities=17% Similarity=0.157 Sum_probs=75.9
Q ss_pred ccchhhHhhhhcCChHHHHHHHHHHHHHH-HHHhhcccHHHHHHHHHHhhhcccchhH-HHHHHHhhccCCCcchHHHHH
Q 015075 4 GAYSWGIISDNYGRRKSFLGIAMVTSVAG-LLSSFSPNYVSLVIFRCFVGVGLGGVPV-FLAYFLEFVPVSHRGRWMVAL 81 (413)
Q Consensus 4 G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~-~~~~~a~~~~~l~~~R~l~G~~~g~~~~-~~~~~~E~~p~~~Rg~~~~~~ 81 (413)
-+.++|.++||+||+...+.+.++..+.. ....| +++.=++.-.+.|++-..... ..+.++-..|.++-|++.++.
T Consensus 316 ~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~F--t~lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~ 393 (459)
T KOG4686|consen 316 LSPVFGAISDKYGFNLWWVASACILTLLGHSGLFF--TFLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFI 393 (459)
T ss_pred hhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHh--hhccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHH
Confidence 46788999999999998877665544332 22222 233334555667776443332 356677888889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCC---hHHHHHHhh
Q 015075 82 SAFWTAGTIFEASLAWVVMTRLN---WRWLLAFSS 113 (413)
Q Consensus 82 ~~~~~~G~~~~~~l~~~l~~~~~---Wr~~f~~~~ 113 (413)
+...++|..+.+++++.+.+..| |--.|++..
T Consensus 394 qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~ 428 (459)
T KOG4686|consen 394 QSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLII 428 (459)
T ss_pred HHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHH
Confidence 99999999999999999887544 555555443
No 253
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.02 E-value=0.0033 Score=59.39 Aligned_cols=106 Identities=17% Similarity=0.248 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHHHHHHHhhc--c-cH------HHHHHHHHHhhhcccch-hHHHHHHHhhccCCC---cchHHHHHHHHH
Q 015075 19 KSFLGIAMVTSVAGLLSSFS--P-NY------VSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSH---RGRWMVALSAFW 85 (413)
Q Consensus 19 ~~~~~~~~l~~~~~~~~~~a--~-~~------~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~---Rg~~~~~~~~~~ 85 (413)
+++.++.+++.+|.++..++ + +. ..++++-++.++|.|+. |...++.+|.+++++ |.+...++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 56778888888888874333 2 22 57888889999999987 888899999888764 455556778888
Q ss_pred HHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHHHHHhh
Q 015075 86 TAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFALLLFYG 124 (413)
Q Consensus 86 ~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~~~~~~ 124 (413)
++|..++..+..++-++.+|.+.|.+.++..++.+..+.
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~ 120 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFL 120 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHH
Confidence 999998888777888899999999998877666554443
No 254
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=96.98 E-value=0.022 Score=57.52 Aligned_cols=122 Identities=16% Similarity=0.188 Sum_probs=69.0
Q ss_pred hHHHHHHHHHHH-hChhHHHHHHHHHHHHHHHHHHhc---ch--h---HHHHHHHHHHHHHhhhhhhhhheeccccccc-
Q 015075 271 PGLILSAIIVDK-IGRKLSMVLMFVSACIFLLPLVFH---QS--A---VVTTVLLFGVRMCVTGTITVATIYAPEIYPT- 340 (413)
Q Consensus 271 ~g~~~~g~l~dr-~grr~~~~~~~~~~~~~~~~~~~~---~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~- 340 (413)
+..+++|++.|+ +||++.+.++.+...+....+... .. . ......+..+..+..+.-+...+...|.+++
T Consensus 38 l~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~ 117 (654)
T TIGR00926 38 LTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEER 117 (654)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCcc
Confidence 456788999998 699888777655543322222221 00 0 1111122222222222223445566676754
Q ss_pred --chhhhHHHHHHhhhhhhHhHHHHHHHHHhhcc-------chhHHHHHHHHHHHHHHHHh
Q 015075 341 --SARTTGFGVASSLGKVGGMVCPLVAVGLVTSC-------HLRLAVILFEVVFVLAIASS 392 (413)
Q Consensus 341 --~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~-------~~~~~~~~~~~~~~~~~~~~ 392 (413)
+.|.....+.+..+++|+++++.+.+++-+.. +...++.+.+++.+++.++.
T Consensus 118 ~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf 178 (654)
T TIGR00926 118 QLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIVF 178 (654)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHH
Confidence 34778899999999999999998888775432 23344544444545444443
No 255
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=96.90 E-value=0.033 Score=51.03 Aligned_cols=133 Identities=14% Similarity=0.001 Sum_probs=68.6
Q ss_pred hhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhhhhhhh--hhe---ecccccccchh
Q 015075 269 ELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITV--ATI---YAPEIYPTSAR 343 (413)
Q Consensus 269 ~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~~e~~p~~~r 343 (413)
..+.+.+.|.+.||+|||+.-+..++.-.+.++.-.. .+.......-+..+......++. .|. ....-+|++..
T Consensus 82 s~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k~~-~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L 160 (354)
T PF05631_consen 82 SAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTKHS-SNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWL 160 (354)
T ss_pred HHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhc-cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHH
Confidence 3445667899999999999877766666655543222 22221111111111111111111 111 22234566655
Q ss_pred hhHHHHHHhh-hhhhHhHHHHHHHHHhhccc--hhHHHHHHHHHHHHHHHHhhcccccccCc
Q 015075 344 TTGFGVASSL-GKVGGMVCPLVAVGLVTSCH--LRLAVILFEVVFVLAIASSLLFPFETMGR 402 (413)
Q Consensus 344 ~~~~g~~~~~-~~~~~~~~p~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~et~~~ 402 (413)
+...+.+... +.+.++.+..+...+.+..+ ...|+.....+.+++.+++...-+|..+.
T Consensus 161 ~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg~ 222 (354)
T PF05631_consen 161 SDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPENYGD 222 (354)
T ss_pred HHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhcccccCCC
Confidence 5555545422 23344555555544444433 34567666666677777776666676553
No 256
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=96.87 E-value=0.0041 Score=58.29 Aligned_cols=102 Identities=18% Similarity=0.204 Sum_probs=68.3
Q ss_pred ccchhhHhhh----hcCChHHHHHHHHH-HHHHHHHHhhcccHHHHHH------------HHHHhhhc---ccc--h-hH
Q 015075 4 GAYSWGIISD----NYGRRKSFLGIAMV-TSVAGLLSSFSPNYVSLVI------------FRCFVGVG---LGG--V-PV 60 (413)
Q Consensus 4 G~~~~g~l~D----r~Grr~~~~~~~~l-~~~~~~~~~~a~~~~~l~~------------~R~l~G~~---~g~--~-~~ 60 (413)
-|++-|..+| ||||||.++....+ ..++.++.+++.++..++. .-++.|+. .+. . ..
T Consensus 83 vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp 162 (498)
T KOG0637|consen 83 VQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGP 162 (498)
T ss_pred ecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhh
Confidence 3566688888 79999998877755 4566667888887655432 23444542 122 1 34
Q ss_pred HHHHHHhhccCCCcch-HHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHH
Q 015075 61 FLAYFLEFVPVSHRGR-WMVALSAFWTAGTIFEASLAWVVMTRLNWRWLL 109 (413)
Q Consensus 61 ~~~~~~E~~p~~~Rg~-~~~~~~~~~~~G~~~~~~l~~~l~~~~~Wr~~f 109 (413)
.-++..+..-+++|-+ +++.+..+..+|.++|..++. +.+|+-.|
T Consensus 163 ~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~----y~~~~~~~ 208 (498)
T KOG0637|consen 163 CRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGS----YLGLYKIF 208 (498)
T ss_pred HHHHHHHhccChhhhhccchhHHHHHHhcceeeeeccc----ccCceEEe
Confidence 4578888877776666 899999999999887665554 45666543
No 257
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=96.84 E-value=0.007 Score=58.33 Aligned_cols=129 Identities=22% Similarity=0.232 Sum_probs=80.2
Q ss_pred HHHHHHHHHHh---C--hhHHHHHHHHHHHHHHHHHHh-c---chhHHHHHHHHHHHHHhhhhhhhhheeccccc---cc
Q 015075 273 LILSAIIVDKI---G--RKLSMVLMFVSACIFLLPLVF-H---QSAVVTTVLLFGVRMCVTGTITVATIYAPEIY---PT 340 (413)
Q Consensus 273 ~~~~g~l~dr~---g--rr~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~---p~ 340 (413)
-.+.|.++|-+ | ||.-++++.+++..+...+.. . .+......+++...++....-.+.-+...|.. |.
T Consensus 41 Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~ 120 (433)
T PF03092_consen 41 KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVVLLFLASFGYAFADVAADALVVELARREPE 120 (433)
T ss_pred hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCc
Confidence 45788999986 3 455555666666444443332 1 12222223333333333333333445555665 44
Q ss_pred chhhhHHHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHhhcccccccCc
Q 015075 341 SARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETMGR 402 (413)
Q Consensus 341 ~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~et~~~ 402 (413)
+ |+.-.+.++.+..+|++++..+.|.+.+..+....+.+.+.+..+..+..+++.+|.+.+
T Consensus 121 ~-~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~~~~~~~e~~~~ 181 (433)
T PF03092_consen 121 S-RGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLIVALFLLEERKVR 181 (433)
T ss_pred h-hHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHHHHHHhhhhcccc
Confidence 4 778888888888899999998888888877766667777777777767777777774443
No 258
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=96.78 E-value=0.55 Score=45.16 Aligned_cols=42 Identities=14% Similarity=0.157 Sum_probs=31.8
Q ss_pred hhhheecccccccchhhhHHHHHHhhhhhhHhHHHHHHHHHh
Q 015075 328 TVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLV 369 (413)
Q Consensus 328 ~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~ 369 (413)
....++-+.+-.|.+-||-+.+-|.+.|+||-.-..+.-.+.
T Consensus 424 Vai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lV 465 (544)
T PF13000_consen 424 VAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLV 465 (544)
T ss_pred HHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHh
Confidence 344566677888999999999999999999866554444444
No 259
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=96.61 E-value=0.3 Score=47.37 Aligned_cols=49 Identities=6% Similarity=-0.064 Sum_probs=40.9
Q ss_pred HHhhhhhh-hhheecccccccchhhhHHHHHHhhhhhhHhHHHHHHHHHh
Q 015075 321 MCVTGTIT-VATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLV 369 (413)
Q Consensus 321 ~~~~~~~~-~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~ 369 (413)
.+.....+ +.|.+.+|++..+...+-.++....+++|.++++.+..++.
T Consensus 140 lw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 140 LWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333445 78999999999999999999999999999999998876654
No 260
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=96.47 E-value=0.029 Score=52.26 Aligned_cols=104 Identities=12% Similarity=0.043 Sum_probs=66.7
Q ss_pred HHHHHHHHHHHhC-----hhHHHHH-HHHHHHHH--HHHH---Hhcc-------hhHHH----HHHHHHHHHHhhhhhhh
Q 015075 272 GLILSAIIVDKIG-----RKLSMVL-MFVSACIF--LLPL---VFHQ-------SAVVT----TVLLFGVRMCVTGTITV 329 (413)
Q Consensus 272 g~~~~g~l~dr~g-----rr~~~~~-~~~~~~~~--~~~~---~~~~-------~~~~~----~~~~~~~~~~~~~~~~~ 329 (413)
.....|+.+|+.+ ||..++. +.+..... ..+. .... +.+.. ...+...+.+.....+.
T Consensus 30 ~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~~g~~~a~l~F~l~G~G~~~s~T~ 109 (403)
T PF03209_consen 30 LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFWLGLALAALAFLLYGLGVHASGTS 109 (403)
T ss_pred HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHhhHhHhHHH
Confidence 4677899999988 8876554 33332221 1111 1122 12111 11122223333334455
Q ss_pred hheecccccccchhhhHHHHHHhhhhhhHhHHHHHHHHHhhccchh
Q 015075 330 ATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLR 375 (413)
Q Consensus 330 ~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~ 375 (413)
.-+..+|..|++.|+.+.++.+.+--+|-+++..+.+.+++.++..
T Consensus 110 ~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~ 155 (403)
T PF03209_consen 110 FLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPE 155 (403)
T ss_pred HHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHH
Confidence 6788999999999999999999999999999999999888876543
No 261
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=96.41 E-value=0.47 Score=45.72 Aligned_cols=39 Identities=13% Similarity=0.056 Sum_probs=28.2
Q ss_pred hhhhhheecccccccchhhhHHHHHHhhhhhhHhHHHHH
Q 015075 326 TITVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLV 364 (413)
Q Consensus 326 ~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~~~p~~ 364 (413)
..+..+.+.++..+++.|-.+..+...+-.+|-.++..+
T Consensus 389 ~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l 427 (437)
T TIGR00939 389 LGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVL 427 (437)
T ss_pred HHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445677788888999989888877777766665555543
No 262
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=96.11 E-value=1.7 Score=43.45 Aligned_cols=118 Identities=14% Similarity=0.192 Sum_probs=80.7
Q ss_pred ccchhhHhhh-hcCChHHHHHHHHHHHHHHHHHhhccc-------------------------HHHHHHHHHHhhhcccc
Q 015075 4 GAYSWGIISD-NYGRRKSFLGIAMVTSVAGLLSSFSPN-------------------------YVSLVIFRCFVGVGLGG 57 (413)
Q Consensus 4 G~~~~g~l~D-r~Grr~~~~~~~~l~~~~~~~~~~a~~-------------------------~~~l~~~R~l~G~~~g~ 57 (413)
..++.++++| .+||-+++.++.++..++..+..++.. ...++...-+..+|.|+
T Consensus 89 ~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg 168 (571)
T KOG1237|consen 89 LPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGG 168 (571)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCC
Confidence 3467789999 679999999988888877654433211 12455566677778888
Q ss_pred h-hHHHHHHHhhcc---C-CCcc--hHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHHHH
Q 015075 58 V-PVFLAYFLEFVP---V-SHRG--RWMVALSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFALLL 121 (413)
Q Consensus 58 ~-~~~~~~~~E~~p---~-~~Rg--~~~~~~~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~~~ 121 (413)
. +...++-+|-++ + +.+. ....++....+.|..++..+-..+-++.+|.+-|.+..+..++.++
T Consensus 169 ~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~ 239 (571)
T KOG1237|consen 169 IRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAIL 239 (571)
T ss_pred CCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHH
Confidence 6 766677777776 3 3333 5667778888888888766555555678999988877665544433
No 263
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=95.58 E-value=0.21 Score=47.18 Aligned_cols=107 Identities=17% Similarity=0.097 Sum_probs=64.3
Q ss_pred HHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHh-----cchhHHHHHHHHHHHHHhh---hhhhhhheeccc
Q 015075 265 ASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVF-----HQSAVVTTVLLFGVRMCVT---GTITVATIYAPE 336 (413)
Q Consensus 265 ~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~e 336 (413)
-.+..++-.+.+.|+.||+|-|.....+....++-...=.. .++....-+...+...+.. -...++.-...-
T Consensus 88 ym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~ 167 (480)
T KOG2563|consen 88 YMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAV 167 (480)
T ss_pred HHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHh
Confidence 33445666778889999999999888777666543332111 1121111111222211111 111233445667
Q ss_pred ccccchhhhHHHHHHhhhhhhHhHHHHHHHHHhhc
Q 015075 337 IYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTS 371 (413)
Q Consensus 337 ~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~ 371 (413)
.||++.|++++.+..+.+.+|..++..+.+.+..+
T Consensus 168 WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~ 202 (480)
T KOG2563|consen 168 WFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPS 202 (480)
T ss_pred hCCcchhhhhhhHHHhcchHHHHHHhhccceecCC
Confidence 78999999999999999899888887665555444
No 264
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=95.57 E-value=0.33 Score=44.62 Aligned_cols=128 Identities=14% Similarity=0.045 Sum_probs=77.6
Q ss_pred HHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhhhhhhhhheecccccccchh
Q 015075 264 IASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSAR 343 (413)
Q Consensus 264 ~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r 343 (413)
+..++-.....+..++.+|+|-++.+..+++...+-...=... +.............++.....+....+-|-||++ .
T Consensus 55 LPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~-~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~-~ 132 (395)
T COG2807 55 LPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLG-GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKR-V 132 (395)
T ss_pred HHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccc-h
Confidence 3333333345677788889887777666554443322211111 1111122222222333333445667788899866 6
Q ss_pred hhHHHHHHhhhhhhHhHHHHHHHHHhhcc-chhHHHHHHHHHHHHHHHHhh
Q 015075 344 TTGFGVASSLGKVGGMVCPLVAVGLVTSC-HLRLAVILFEVVFVLAIASSL 393 (413)
Q Consensus 344 ~~~~g~~~~~~~~~~~~~p~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~ 393 (413)
+..+|+....-.+++.+++.....+.++. ++..+..++...++++.++.+
T Consensus 133 ~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~Wl 183 (395)
T COG2807 133 GLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWL 183 (395)
T ss_pred hhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHh
Confidence 77788888888888888888887777665 466777888888777755554
No 265
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=95.21 E-value=1.7 Score=40.49 Aligned_cols=43 Identities=19% Similarity=0.182 Sum_probs=32.9
Q ss_pred hhhheecccccccchhhhHHHHHHhhhhhhHhHHHHHHHHHhh
Q 015075 328 TVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVT 370 (413)
Q Consensus 328 ~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~ 370 (413)
-..++..+.+-|+.+-|+-+.+-|...++|+-.=..+...+.|
T Consensus 388 v~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D 430 (510)
T KOG3574|consen 388 VSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLAD 430 (510)
T ss_pred HHHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcc
Confidence 3455678899999999999999999999987654445554543
No 266
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=95.12 E-value=0.34 Score=46.72 Aligned_cols=139 Identities=19% Similarity=0.238 Sum_probs=71.7
Q ss_pred HHHHHhhhhhHHHHHHHHHHHhCh-hHHHHHHHHHHHHHHHHH-H--hcchhHHHHHHHHHHHHHhhh--hhhhhheecc
Q 015075 262 VFIASLAELPGLILSAIIVDKIGR-KLSMVLMFVSACIFLLPL-V--FHQSAVVTTVLLFGVRMCVTG--TITVATIYAP 335 (413)
Q Consensus 262 ~~~~~~~~~~g~~~~g~l~dr~gr-r~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 335 (413)
.-...++.+.+.+..|+...|.++ |+.++.+++++.+..+.+ . ...+.. ...+++.-.+...| .....=.|.+
T Consensus 77 iaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~-~y~mL~~R~l~Gvg~~n~a~lR~Y~a 155 (488)
T KOG2325|consen 77 IAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVPNGV-KYLMLVARILTGVGVGNFAVLRAYIA 155 (488)
T ss_pred HHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcccch-HHHHHHHHHHcCcCcccHHHHHHHHH
Confidence 344566777888899999999883 444455555554443333 2 222211 12222222222222 2233445666
Q ss_pred cccccchhhhHHHHHHhhhhhhHhHHHHHHH---HHhhc---------cc-hhHHHHHHHHHHHHHHHHhhcccccccC
Q 015075 336 EIYPTSARTTGFGVASSLGKVGGMVCPLVAV---GLVTS---------CH-LRLAVILFEVVFVLAIASSLLFPFETMG 401 (413)
Q Consensus 336 e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~---~l~~~---------~~-~~~~~~~~~~~~~~~~~~~~~~~~et~~ 401 (413)
+---.+.|..+.+..+..--+|.+++|.+.. .|.+. .+ ++.+.++..++.++..+...++..|...
T Consensus 156 ~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~ 234 (488)
T KOG2325|consen 156 DASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYR 234 (488)
T ss_pred hccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeeccc
Confidence 6444444555555554433445555554332 22211 11 2356677788888888888777666543
No 267
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=95.12 E-value=0.57 Score=37.94 Aligned_cols=101 Identities=13% Similarity=0.070 Sum_probs=63.0
Q ss_pred hhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhhhhhhhhheecccccccchhhhH
Q 015075 267 LAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTTG 346 (413)
Q Consensus 267 ~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~ 346 (413)
....+++++.+.+.+++|.|..++++.+.-.+........ +.+.....-...+++....+..-..+..+.-+++.|++-
T Consensus 48 ~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~~~-~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~~~~ 126 (156)
T PF05978_consen 48 GSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASFFYP-NSYTLYPASALLGFGAALLWTAQGTYLTSYSTEETIGRN 126 (156)
T ss_pred HHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHHHhhH
Confidence 3345567788899999999999888777665544443322 222222222222222223334444567777788899999
Q ss_pred HHHHHhhhhhhHhHHHHHHHHH
Q 015075 347 FGVASSLGKVGGMVCPLVAVGL 368 (413)
Q Consensus 347 ~g~~~~~~~~~~~~~p~~~~~l 368 (413)
.++...+.+.+.+++..+...+
T Consensus 127 ~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 127 TGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 9998888888777777655433
No 268
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=94.97 E-value=0.52 Score=42.10 Aligned_cols=104 Identities=21% Similarity=0.285 Sum_probs=60.6
Q ss_pred hhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcch--hHHHHHHHHHHHHHhhhhhhhhheeccccccc-chh
Q 015075 267 LAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQS--AVVTTVLLFGVRMCVTGTITVATIYAPEIYPT-SAR 343 (413)
Q Consensus 267 ~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~-~~r 343 (413)
+....+.+..|.+.||.|||+.+..+...............+ ...................+....+.+|..|. +.|
T Consensus 50 ~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 129 (338)
T COG0477 50 LGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATER 129 (338)
T ss_pred HHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHH
Confidence 334445588999999999997666655431111111122222 22222222222233334456677888999987 678
Q ss_pred hhHHHHHHh-hhhhhHhHHHHHHHHHhh
Q 015075 344 TTGFGVASS-LGKVGGMVCPLVAVGLVT 370 (413)
Q Consensus 344 ~~~~g~~~~-~~~~~~~~~p~~~~~l~~ 370 (413)
+...+.... ...++...+|.+.+.+..
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (338)
T COG0477 130 GLAVGLVTLGAGALGLALGPLLAGLLLG 157 (338)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888877 466777777766555544
No 269
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=94.68 E-value=4.7 Score=39.44 Aligned_cols=95 Identities=20% Similarity=0.249 Sum_probs=60.5
Q ss_pred chhhHhhhhcCChHHHHHHHHHHHHHHHHHhhc---------ccH----------------------HHHHHHHHHhhhc
Q 015075 6 YSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFS---------PNY----------------------VSLVIFRCFVGVG 54 (413)
Q Consensus 6 ~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a---------~~~----------------------~~l~~~R~l~G~~ 54 (413)
.+...++|+++|.+++-+.+..+...-.+.++. ++. |.+.++-++.-+
T Consensus 77 ~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aEl- 155 (491)
T PF03219_consen 77 ILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAEL- 155 (491)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHH-
Confidence 356789999999999877776665444444432 111 111111111111
Q ss_pred ccch--hH-HHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHhc
Q 015075 55 LGGV--PV-FLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMT 101 (413)
Q Consensus 55 ~g~~--~~-~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~l~~ 101 (413)
.|.. +. -..+..|.++.+|-.|..+++..+.++|.++++.+...+.+
T Consensus 156 wgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 156 WGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111 21 24567899999999999999999999999998877776665
No 270
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=94.47 E-value=1.4 Score=38.68 Aligned_cols=54 Identities=19% Similarity=0.271 Sum_probs=34.8
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHH-----hcCCChHHHHHHhhHHHHHHHHHhhc
Q 015075 72 SHRGRWMVALSAFWTAGTIFEASLAWVV-----MTRLNWRWLLAFSSVPSFALLLFYGL 125 (413)
Q Consensus 72 ~~Rg~~~~~~~~~~~~G~~~~~~l~~~l-----~~~~~Wr~~f~~~~i~~~~~~~~~~~ 125 (413)
++|+..+.+-..++++|.++.....-.- .-.-+|++++.+.++..++-++.+.+
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~i 60 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYII 60 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5778778888888899988764332111 11246999988877766554444433
No 271
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=92.59 E-value=8.9 Score=37.57 Aligned_cols=42 Identities=10% Similarity=0.011 Sum_probs=37.0
Q ss_pred hhheecccccccchhhhHHHHHHhhhhhhHhHHHHHHHHHhh
Q 015075 329 VATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVT 370 (413)
Q Consensus 329 ~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~ 370 (413)
+.|.+.+|+.+.+...+-.++....+++|.+++..+..++.+
T Consensus 164 LFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 164 LFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 579999999999999999999999999999988877665554
No 272
>PF12832 MFS_1_like: MFS_1 like family
Probab=92.40 E-value=0.086 Score=36.98 Aligned_cols=27 Identities=30% Similarity=0.662 Sum_probs=22.0
Q ss_pred ccccchhhHhhhhcCChHHHHHHHHHH
Q 015075 2 LLGAYSWGIISDNYGRRKSFLGIAMVT 28 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~~~~~~~~l~ 28 (413)
+++++++|.++||+||++.......++
T Consensus 49 ~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 49 FLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 367899999999999999887665543
No 273
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=92.19 E-value=6.6 Score=37.32 Aligned_cols=124 Identities=17% Similarity=0.192 Sum_probs=67.4
Q ss_pred HHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHHHHHH--HHHHHHHhhhhhhhhheecccccccchhhhHHHHH
Q 015075 273 LILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVL--LFGVRMCVTGTITVATIYAPEIYPTSARTTGFGVA 350 (413)
Q Consensus 273 ~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~ 350 (413)
.+....+.|.++-|++++...+...+....+.+.++...+-.. +++... +.-...+.|.=-..|++.--.+.+.+
T Consensus 58 l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~~yg~~~---a~evay~sYiys~v~~~~yq~vts~~ 134 (412)
T PF01770_consen 58 LLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQFFYGLAT---AAEVAYYSYIYSVVDKEHYQKVTSYT 134 (412)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHHHHHHH---HHHHHHHHHheeecCHHHHHHHHHHH
Confidence 3566789999999999888777766655555544443322221 222211 11122334444455677667777877
Q ss_pred HhhhhhhHhHHHHHHHHHhhc--cchhHHHHHHHHHHHHHHHHhhcccccc
Q 015075 351 SSLGKVGGMVCPLVAVGLVTS--CHLRLAVILFEVVFVLAIASSLLFPFET 399 (413)
Q Consensus 351 ~~~~~~~~~~~p~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~et 399 (413)
.+..-+|-+++..+.-.+... .+......+......++.++.+++|+.+
T Consensus 135 raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fLP~~~ 185 (412)
T PF01770_consen 135 RAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFLPMPK 185 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 777767666666554333332 2222222333333455666667766544
No 274
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=91.81 E-value=0.99 Score=42.63 Aligned_cols=65 Identities=18% Similarity=0.146 Sum_probs=54.5
Q ss_pred HhhcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHHHHHHH
Q 015075 35 SSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVV 99 (413)
Q Consensus 35 ~~~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~l 99 (413)
.-+.++.+..++.-+..|+..|.. ......+.|..|+++|-..++....+.+.|.+++..++..+
T Consensus 329 ~~fipsi~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 329 YRFIPSIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 345688999999999999976664 55667788889999999999999999999999988877654
No 275
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=89.73 E-value=3.5 Score=39.93 Aligned_cols=23 Identities=17% Similarity=0.261 Sum_probs=14.7
Q ss_pred HHHHHHHHHHHHHHHhhcccccc
Q 015075 377 AVILFEVVFVLAIASSLLFPFET 399 (413)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~et 399 (413)
.+.+++...++..+.+.++.+|.
T Consensus 202 yl~fwg~~~l~~T~~v~~~k~E~ 224 (544)
T PF13000_consen 202 YLKFWGWVFLIVTILVAFFKKEK 224 (544)
T ss_pred HHHHHHHHHHHHHHHHheEeecc
Confidence 34556667666667777776664
No 276
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=88.55 E-value=11 Score=36.32 Aligned_cols=57 Identities=12% Similarity=0.064 Sum_probs=38.3
Q ss_pred ccchhhhHHHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHhhcc
Q 015075 339 PTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLF 395 (413)
Q Consensus 339 p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (413)
++...+..++...-+-.++.+++|.+.+.+++..+......+.++..+++...=+++
T Consensus 143 ~~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~ 199 (432)
T PF06963_consen 143 DPGALARMNATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYFL 199 (432)
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHH
Confidence 345556666666666677999999999988876666555555555555555544433
No 277
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=87.38 E-value=0.18 Score=46.18 Aligned_cols=38 Identities=24% Similarity=0.250 Sum_probs=3.0
Q ss_pred hhhhhheecccccccchhhhHHHHHHhhhhhhHhHHHH
Q 015075 326 TITVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPL 363 (413)
Q Consensus 326 ~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~~~p~ 363 (413)
..++.+.+.++..+++.|..+..+...+-.+|-..|..
T Consensus 265 l~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ 302 (309)
T PF01733_consen 265 LSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSV 302 (309)
T ss_dssp --HHHH--------------------------------
T ss_pred hhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45678888999999888877777766665555444443
No 278
>PF12832 MFS_1_like: MFS_1 like family
Probab=86.53 E-value=8.9 Score=26.76 Aligned_cols=31 Identities=23% Similarity=0.293 Sum_probs=23.9
Q ss_pred HHHHHhhhhhHHHHHHHHHHHhChhHHHHHH
Q 015075 262 VFIASLAELPGLILSAIIVDKIGRKLSMVLM 292 (413)
Q Consensus 262 ~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~ 292 (413)
..+.-+..+++..+.|.++||.+|++.....
T Consensus 41 ~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~ 71 (77)
T PF12832_consen 41 SAIRPLIRFLAPPLWGFLADKFGKRKVILLG 71 (77)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCccHHHHHH
Confidence 3445556778899999999999998876553
No 279
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=86.33 E-value=5 Score=37.81 Aligned_cols=75 Identities=13% Similarity=0.081 Sum_probs=50.2
Q ss_pred HHhhhhhhhhheecccccccc---hhhhHHHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHhhcc
Q 015075 321 MCVTGTITVATIYAPEIYPTS---ARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLF 395 (413)
Q Consensus 321 ~~~~~~~~~~~~~~~e~~p~~---~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (413)
++.++.=+....+..|.++++ .|.......+..-++|+.+++.+.+++-+..+....|.+..+..+++.+..+.-
T Consensus 45 ~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~ 122 (372)
T PF00854_consen 45 VGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSG 122 (372)
T ss_dssp HHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCC
T ss_pred hccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhC
Confidence 333333334455566766654 577778888999999999999888888777777776776666666665544443
No 280
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=83.89 E-value=4 Score=38.09 Aligned_cols=25 Identities=16% Similarity=0.179 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHHHHHhhccccccc
Q 015075 376 LAVILFEVVFVLAIASSLLFPFETM 400 (413)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~et~ 400 (413)
..+++.+...+++.....++.+|..
T Consensus 216 gy~~fwg~~~~vat~Lv~~~kke~~ 240 (510)
T KOG3574|consen 216 GYLWFWGALFIVATTLVALLKKEND 240 (510)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 3456677777877777777655443
No 281
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=83.87 E-value=31 Score=33.43 Aligned_cols=99 Identities=11% Similarity=0.046 Sum_probs=64.3
Q ss_pred HhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhhhhhhhhheecccccccchhhh
Q 015075 266 SLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTT 345 (413)
Q Consensus 266 ~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~ 345 (413)
...-.+.+++++.+.|+++.|..++++...-..+-..+... |.+.....-...++.....+.--..|.+|..+++.+.+
T Consensus 60 Y~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~-N~y~~yfssallG~Gaallw~GqG~ylt~~st~~tie~ 138 (461)
T KOG3098|consen 60 YAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFP-NSYYLYFSSALLGFGAALLWTGQGGYLTSNSTRETIER 138 (461)
T ss_pred HHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhc-chHHHHHHHHHhhhhHHheecccceehhhcCChhhHHH
Confidence 33445677889999999999998888766555444443333 22222222222222222223334468999999999999
Q ss_pred HHHHHHhhhhhhHhHHHHHH
Q 015075 346 GFGVASSLGKVGGMVCPLVA 365 (413)
Q Consensus 346 ~~g~~~~~~~~~~~~~p~~~ 365 (413)
..++..+++..+.+.+..+.
T Consensus 139 Nisi~Wai~~~~li~Ggi~l 158 (461)
T KOG3098|consen 139 NISIFWAIGQSSLIIGGIIL 158 (461)
T ss_pred HHHHHHHHHHHHHHhhhHhh
Confidence 99999999998887776544
No 282
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=83.11 E-value=1.5 Score=31.33 Aligned_cols=43 Identities=12% Similarity=0.122 Sum_probs=37.4
Q ss_pred ccccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHH
Q 015075 2 LLGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSL 44 (413)
Q Consensus 2 ~~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l 44 (413)
++|++....+.++..+++.+..+++...+..+.+++..+++.+
T Consensus 41 L~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~~w 83 (85)
T PF06779_consen 41 LVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFWLW 83 (85)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchHHH
Confidence 4688888888888888899999999999999999999988765
No 283
>PRK03612 spermidine synthase; Provisional
Probab=78.62 E-value=24 Score=35.02 Aligned_cols=67 Identities=16% Similarity=0.176 Sum_probs=37.3
Q ss_pred HHHHhhhcccch-hHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHHHHHHH-hcCCC-hHHHHHHhhH
Q 015075 47 FRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVV-MTRLN-WRWLLAFSSV 114 (413)
Q Consensus 47 ~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~l-~~~~~-Wr~~f~~~~i 114 (413)
.-++.|+-.|.. |....+..+. ..++-|+..+-......+|.++|+++.+++ .+.+| .+..+..+.+
T Consensus 116 ~~~~~~~l~G~~~Pl~~~~~~~~-~~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l 185 (521)
T PRK03612 116 LVLLIGLLIGMEIPLLMRILQRI-RDQHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSL 185 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc-cccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHH
Confidence 334556655654 4433333222 122235556677778888999888876664 45666 4555544433
No 284
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=77.41 E-value=12 Score=34.07 Aligned_cols=76 Identities=16% Similarity=0.037 Sum_probs=60.1
Q ss_pred HHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHHHHHH
Q 015075 23 GIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWV 98 (413)
Q Consensus 23 ~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~ 98 (413)
..++++.+....-.++|+++...+.-+..|+-.|+. ....--+.+-.++++|-.+++....+-++|..+++.++-.
T Consensus 324 ~vNl~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalp 400 (409)
T KOG3880|consen 324 FVNLLFFLLQAWYWFTPSIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALP 400 (409)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhcc
Confidence 344556667777789999999999999999854543 4555567788999999999999999999999988777654
No 285
>PRK03612 spermidine synthase; Provisional
Probab=74.82 E-value=46 Score=33.05 Aligned_cols=39 Identities=15% Similarity=0.044 Sum_probs=23.7
Q ss_pred hhHHHHHHhhhhhhHhHHHHHHHHHh-hccchhHHHHHHH
Q 015075 344 TTGFGVASSLGKVGGMVCPLVAVGLV-TSCHLRLAVILFE 382 (413)
Q Consensus 344 ~~~~g~~~~~~~~~~~~~p~~~~~l~-~~~~~~~~~~~~~ 382 (413)
+...|-.++++.+|+++++++.+.++ ...+.....+..+
T Consensus 144 g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a 183 (521)
T PRK03612 144 GHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTG 183 (521)
T ss_pred hhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHH
Confidence 44567778888888888887766543 3444433333333
No 286
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=70.46 E-value=1e+02 Score=29.40 Aligned_cols=32 Identities=16% Similarity=0.164 Sum_probs=22.3
Q ss_pred hhhhhheecccccccchhhhHHHHHHhhhhhh
Q 015075 326 TITVATIYAPEIYPTSARTTGFGVASSLGKVG 357 (413)
Q Consensus 326 ~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~ 357 (413)
..++.+.+.++-.|++.+-.+..+....-..|
T Consensus 360 ltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~G 391 (406)
T KOG1479|consen 360 LTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGG 391 (406)
T ss_pred HhhheehhcCCCCChHHHHHHHHHHHHHHHHH
Confidence 45678889999999988877666655544333
No 287
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=69.34 E-value=25 Score=31.36 Aligned_cols=22 Identities=27% Similarity=0.321 Sum_probs=15.6
Q ss_pred HHHHHHHHHHhChhHHHHHHHH
Q 015075 273 LILSAIIVDKIGRKLSMVLMFV 294 (413)
Q Consensus 273 ~~~~g~l~dr~grr~~~~~~~~ 294 (413)
+.+.|-+.||.|||+.-+.-++
T Consensus 89 GtivgSLaDkqGRKracvtyci 110 (454)
T KOG4332|consen 89 GTIVGSLADKQGRKRACVTYCI 110 (454)
T ss_pred HHHHHHHHhhhccccceeeehH
Confidence 4456789999999986554333
No 288
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=61.14 E-value=58 Score=23.26 Aligned_cols=45 Identities=11% Similarity=0.100 Sum_probs=31.3
Q ss_pred HHHhhhhhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhcch
Q 015075 264 IASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQS 308 (413)
Q Consensus 264 ~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~ 308 (413)
...++.++|.+...++.++..+|.....+.+.+.+....+...++
T Consensus 35 aNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~ 79 (85)
T PF06779_consen 35 ANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHS 79 (85)
T ss_pred HHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 445566778888888888777677777777777777666655443
No 289
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=61.06 E-value=1e+02 Score=26.15 Aligned_cols=28 Identities=14% Similarity=0.044 Sum_probs=15.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCChHH
Q 015075 80 ALSAFWTAGTIFEASLAWVVMTRLNWRW 107 (413)
Q Consensus 80 ~~~~~~~~G~~~~~~l~~~l~~~~~Wr~ 107 (413)
......-++...|+.++..+.+..+.+.
T Consensus 166 ~~~~~~i~~f~~Ga~~ga~l~~~~~~~a 193 (209)
T PF06912_consen 166 LRYLLIILSFFIGAILGALLYRRLGFWA 193 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 3344444555566666666666666544
No 290
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=58.98 E-value=38 Score=32.78 Aligned_cols=61 Identities=16% Similarity=0.201 Sum_probs=48.6
Q ss_pred ccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHHHHHHH
Q 015075 39 PNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVV 99 (413)
Q Consensus 39 ~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~l 99 (413)
++-+..++.-++.|+..|-. .....+..+..++++|..+..+...+..+|..+|+.++..+
T Consensus 370 ~~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~~ 431 (437)
T TIGR00939 370 PGDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFLF 431 (437)
T ss_pred cccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566778899999998865 44556677888899999988998999999999888876654
No 291
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=58.15 E-value=44 Score=26.86 Aligned_cols=81 Identities=11% Similarity=0.157 Sum_probs=46.0
Q ss_pred HHHHHhChhHHHHHHHHHH--HH-HHHHHHh-cch---hHHHHHHHHHHHHHhhhhhhhhheecccccccchhhhHHHHH
Q 015075 278 IIVDKIGRKLSMVLMFVSA--CI-FLLPLVF-HQS---AVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTTGFGVA 350 (413)
Q Consensus 278 ~l~dr~grr~~~~~~~~~~--~~-~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~ 350 (413)
.++||+-||..+..+.-.. +. +.+.+.. ... ....+.++.-..+|..+..++.|.+.+-...++.-|...|+-
T Consensus 56 ~Vs~RM~rRm~~~~GiP~~lG~~~f~~~y~l~~~~~~dvP~~~~~~~S~~~Fg~gllGisYGilSaSWD~~r~GSllG~~ 135 (153)
T PF11947_consen 56 VVSNRMLRRMAVFVGIPTALGVAVFVVFYYLKSRQIVDVPPWAVLLVSLVFFGLGLLGISYGILSASWDPEREGSLLGWE 135 (153)
T ss_pred HHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHhccccccCchHHHHHHHHHHHHHHHhhhhhhcccccCCCCCCCcccHH
Confidence 4789998887665543221 11 1111111 111 111122233333555567788888888888888888888888
Q ss_pred HhhhhhhH
Q 015075 351 SSLGKVGG 358 (413)
Q Consensus 351 ~~~~~~~~ 358 (413)
.+--+++-
T Consensus 136 e~~~N~~r 143 (153)
T PF11947_consen 136 EFKRNWGR 143 (153)
T ss_pred HHHHhHHH
Confidence 77666643
No 292
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=51.80 E-value=2.5e+02 Score=27.65 Aligned_cols=96 Identities=14% Similarity=0.127 Sum_probs=62.3
Q ss_pred cchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhc---------ccH-----------------------HHHHHHHHHhh
Q 015075 5 AYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFS---------PNY-----------------------VSLVIFRCFVG 52 (413)
Q Consensus 5 ~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a---------~~~-----------------------~~l~~~R~l~G 52 (413)
..+.+++.+++-|.+++-+.+..+...-++.++. +++ |...+.-.+.=
T Consensus 79 ~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aE 158 (509)
T COG3202 79 TIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAE 158 (509)
T ss_pred HHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHH
Confidence 3566889999999999888777777666666653 111 11111111111
Q ss_pred hcccch--h-HHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHhc
Q 015075 53 VGLGGV--P-VFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMT 101 (413)
Q Consensus 53 ~~~g~~--~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~l~~ 101 (413)
+ .|.. + .-.....|.+..+|-.|..+.++.+.+++.++++.+...+..
T Consensus 159 L-WgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k 209 (509)
T COG3202 159 L-WGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSK 209 (509)
T ss_pred H-HHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 1 1111 1 112446788888999999999999999999988887777654
No 293
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=48.36 E-value=76 Score=23.67 Aligned_cols=54 Identities=13% Similarity=-0.005 Sum_probs=35.7
Q ss_pred cchhhhHHHHHHhhhhhhHhHHHHHHHHHhhccc--hhHHHHHHHHHHHHHHHHhh
Q 015075 340 TSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCH--LRLAVILFEVVFVLAIASSL 393 (413)
Q Consensus 340 ~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~ 393 (413)
+..++.+.++-.+.--+++++.....|++++.+- ..+.++++..+.+++.+...
T Consensus 37 ~s~k~~~~a~klssefIsGilVGa~iG~llD~~agTsPwglIv~lllGf~AG~lnv 92 (116)
T COG5336 37 ESIKGYAQAFKLSSEFISGILVGAGIGWLLDKFAGTSPWGLIVFLLLGFGAGVLNV 92 (116)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence 4567777777777667778777777888888752 23455666666666655444
No 294
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=42.74 E-value=1.6e+02 Score=26.28 Aligned_cols=89 Identities=19% Similarity=0.262 Sum_probs=44.7
Q ss_pred cccchhhHhhhh-cCChHHHH----HHHHHHHHHHHHH-hhcc----cHHHHHHHHHHhhhc-ccchhHHHHHHHhhccC
Q 015075 3 LGAYSWGIISDN-YGRRKSFL----GIAMVTSVAGLLS-SFSP----NYVSLVIFRCFVGVG-LGGVPVFLAYFLEFVPV 71 (413)
Q Consensus 3 ~G~~~~g~l~Dr-~Grr~~~~----~~~~l~~~~~~~~-~~a~----~~~~l~~~R~l~G~~-~g~~~~~~~~~~E~~p~ 71 (413)
+|.+..|+.... +-||+-+. .+.+++.++.++. ...+ ++..++++-++.|+. .|..++..-.-.| .+.
T Consensus 156 ~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~ViL~lPhE-yK~ 234 (267)
T PF07672_consen 156 LGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQGVILNLPHE-YKG 234 (267)
T ss_pred hhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhHHHhcChhh-hcC
Confidence 455556666553 33444322 2344444544442 1222 356788888888874 4444433222223 222
Q ss_pred CCcchHHHHHHHHHHHHHHHH
Q 015075 72 SHRGRWMVALSAFWTAGTIFE 92 (413)
Q Consensus 72 ~~Rg~~~~~~~~~~~~G~~~~ 92 (413)
..+.+..-.++..|.+|.++-
T Consensus 235 ~~pk~ig~~Fg~iWGfGY~~y 255 (267)
T PF07672_consen 235 YNPKKIGIQFGLIWGFGYIFY 255 (267)
T ss_pred CCcceehhHHHHHHHHHHHHH
Confidence 233334456677888887754
No 295
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=41.26 E-value=1.2e+02 Score=24.33 Aligned_cols=80 Identities=19% Similarity=0.165 Sum_probs=45.0
Q ss_pred HhhhhcCChHHHHHHHHHH-HHHH-----HHHh----hcccHHHHHHHHHHhhhcccchhHHHHHHHhhccCCCcchHHH
Q 015075 10 IISDNYGRRKSFLGIAMVT-SVAG-----LLSS----FSPNYVSLVIFRCFVGVGLGGVPVFLAYFLEFVPVSHRGRWMV 79 (413)
Q Consensus 10 ~l~Dr~Grr~~~~~~~~l~-~~~~-----~~~~----~a~~~~~l~~~R~l~G~~~g~~~~~~~~~~E~~p~~~Rg~~~~ 79 (413)
.++||.-||..+..++=.. +++. .+.. -.|+...+++.-++.|+|.- ...+..++--+.+++-|.+.|
T Consensus 56 ~Vs~RM~rRm~~~~GiP~~lG~~~f~~~y~l~~~~~~dvP~~~~~~~S~~~Fg~gll--GisYGilSaSWD~~r~GSllG 133 (153)
T PF11947_consen 56 VVSNRMLRRMAVFVGIPTALGVAVFVVFYYLKSRQIVDVPPWAVLLVSLVFFGLGLL--GISYGILSASWDPEREGSLLG 133 (153)
T ss_pred HHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHhccccccCchHHHHHHHHHHHHHHH--hhhhhhcccccCCCCCCCccc
Confidence 4689998887654443221 1111 1111 12445555555555555432 233444555677888898888
Q ss_pred HHHHHHHHHHHH
Q 015075 80 ALSAFWTAGTIF 91 (413)
Q Consensus 80 ~~~~~~~~G~~~ 91 (413)
+-.+--+++-+.
T Consensus 134 ~~e~~~N~~r~~ 145 (153)
T PF11947_consen 134 WEEFKRNWGRMW 145 (153)
T ss_pred HHHHHHhHHHHH
Confidence 877777776654
No 296
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=39.50 E-value=44 Score=30.54 Aligned_cols=109 Identities=18% Similarity=0.168 Sum_probs=58.0
Q ss_pred cCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccc-hhHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHH
Q 015075 15 YGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGG-VPVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEA 93 (413)
Q Consensus 15 ~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~-~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~ 93 (413)
||.|. .+..++.+.+-.+.+++.+.++-+.+-.+..++.|. ...-.. .+...|+..-. .+..+.....++|+
T Consensus 91 f~~Ri--~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~-lss~Y~~~~i~----~WSSGTGgAGliGa 163 (409)
T KOG3880|consen 91 FGFRI--ALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLA-LSSRYPSIVIA----GWSSGTGGAGLIGA 163 (409)
T ss_pred cchHH--HHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhh-hhccCCCceec----cccCCCCcchhhhh
Confidence 44443 344455666777889999999888888887776663 211111 12223322222 22333333334443
Q ss_pred HHHHHHhc---CCChHHHHHHhhHHHHHHHHHhhcCCCCch
Q 015075 94 SLAWVVMT---RLNWRWLLAFSSVPSFALLLFYGLAPESPR 131 (413)
Q Consensus 94 ~l~~~l~~---~~~Wr~~f~~~~i~~~~~~~~~~~~pEsp~ 131 (413)
. ++..++ ...-|...++....+++..+.++++-++|+
T Consensus 164 ~-SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~pe 203 (409)
T KOG3880|consen 164 S-SYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKSPE 203 (409)
T ss_pred h-HHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCCCc
Confidence 3 232222 456788777776666666555555544443
No 297
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=37.66 E-value=14 Score=33.88 Aligned_cols=60 Identities=17% Similarity=0.201 Sum_probs=2.2
Q ss_pred ccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHHHHHH
Q 015075 39 PNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWV 98 (413)
Q Consensus 39 ~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~ 98 (413)
+|-+..++.-++.|+..|-. .....+..+..++++|..+..+...+...|..+|..++..
T Consensus 246 ~~d~~~~i~~~l~g~TNGyl~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~~ 306 (309)
T PF01733_consen 246 NSDAWFIILMLLFGFTNGYLSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSFL 306 (309)
T ss_dssp ---------------------HHHH------------------------------------
T ss_pred cchHHHHHHHHHHHHccchhhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566777888999998865 4556777888999999888888888888888888776654
No 298
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=36.23 E-value=4.3e+02 Score=26.03 Aligned_cols=42 Identities=12% Similarity=0.002 Sum_probs=36.0
Q ss_pred hhheecccccccchhhhHHHHHHhhhhhhHhHHHHHHHHHhh
Q 015075 329 VATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVT 370 (413)
Q Consensus 329 ~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~ 370 (413)
+.|...+|+...+....-.++.+..++++..++..+...+..
T Consensus 168 lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k 209 (509)
T COG3202 168 LFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSK 209 (509)
T ss_pred HHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 678899999999999999999999999998888777666554
No 299
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=35.64 E-value=4e+02 Score=25.45 Aligned_cols=57 Identities=14% Similarity=0.119 Sum_probs=37.6
Q ss_pred ccccccchhhhHHHHHHhhhhhhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHH
Q 015075 335 PEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIAS 391 (413)
Q Consensus 335 ~e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 391 (413)
+|--++..-..-++.....-..-..++|.+.+.+++..+......+|++...++..+
T Consensus 165 s~g~s~s~lt~mnatir~iDq~tn~Lapv~tg~Iitfvsl~~~~g~f~~w~~vsm~~ 221 (503)
T KOG2601|consen 165 SEGESPSVLTNMNATIRGIDQSTNLLAPVITGLIITFVSLRASAGTFAAWALVSMWV 221 (503)
T ss_pred cCCCCHHHHhhcchhhhhhhhhhhchhhhhhcccceeechhhhhhhhHHHHHHHHHH
Confidence 354455555445577777777788999999998887766655556666666654433
No 300
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=35.52 E-value=2.2e+02 Score=26.79 Aligned_cols=14 Identities=14% Similarity=0.306 Sum_probs=8.3
Q ss_pred HhcCCChHHHHHHh
Q 015075 99 VMTRLNWRWLLAFS 112 (413)
Q Consensus 99 l~~~~~Wr~~f~~~ 112 (413)
+.+..+.|-+|.+.
T Consensus 36 if~~~~f~kPFfiT 49 (416)
T KOG2765|consen 36 IFEDYNFRKPFFIT 49 (416)
T ss_pred HHhhcccCCceeEe
Confidence 44556777776543
No 301
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=34.99 E-value=1e+02 Score=29.32 Aligned_cols=61 Identities=16% Similarity=0.242 Sum_probs=47.2
Q ss_pred cccHHHHHHHHHHhhhcccch-hHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHHHHHH
Q 015075 38 SPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWV 98 (413)
Q Consensus 38 a~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~ 98 (413)
-.+-+++++.-.+.|++.|-. .....+.-+-.|++++-.+..+.......|...|..+++.
T Consensus 340 ~~~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s~l 401 (406)
T KOG1479|consen 340 FESDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLSWV 401 (406)
T ss_pred ecCchHHHHHHHHHHhccchHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 345677888999999999864 3455677788999999888888888888888887776554
No 302
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=34.99 E-value=77 Score=23.67 Aligned_cols=30 Identities=17% Similarity=0.360 Sum_probs=20.8
Q ss_pred cCCChHHHHHHhhHHHHHH-HHHhhcCCCCc
Q 015075 101 TRLNWRWLLAFSSVPSFAL-LLFYGLAPESP 130 (413)
Q Consensus 101 ~~~~Wr~~f~~~~i~~~~~-~~~~~~~pEsp 130 (413)
+..+|+.+|++...+++++ .+.+...||+.
T Consensus 55 d~e~we~~~f~~~~~~~v~~~~~~~y~PD~~ 85 (105)
T PF10183_consen 55 DWEGWELPFFFGFSGSLVFGGVFLAYKPDTS 85 (105)
T ss_pred hHhhhHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 3468999998877666554 55556678764
No 303
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=34.82 E-value=69 Score=29.61 Aligned_cols=54 Identities=13% Similarity=0.139 Sum_probs=40.4
Q ss_pred cccchhhHhhhhcCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhhcccc
Q 015075 3 LGAYSWGIISDNYGRRKSFLGIAMVTSVAGLLSSFSPNYVSLVIFRCFVGVGLGG 57 (413)
Q Consensus 3 ~G~~~~g~l~Dr~Grr~~~~~~~~l~~~~~~~~~~a~~~~~l~~~R~l~G~~~g~ 57 (413)
..+++.+.+-+++|-|.++.++...+...... =+=+.+..++-.-...|+|.|.
T Consensus 73 ~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA~-Nl~pr~~tlVPa~~~~G~aa~p 126 (390)
T KOG3097|consen 73 DSSMFMPLLIRFLGTKWTMVLAVFPYALYIAA-NLEPRYETLVPAGLVLGMAAGP 126 (390)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHh-hcchhHHhhccHHHhhcccccc
Confidence 34566678899999999999888776654332 2345688888899999998774
No 304
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=34.48 E-value=43 Score=32.36 Aligned_cols=43 Identities=14% Similarity=0.043 Sum_probs=29.7
Q ss_pred HHhhhhhhhhheecccccccchhhh-HHHHHHhhhhhhHhHHHH
Q 015075 321 MCVTGTITVATIYAPEIYPTSARTT-GFGVASSLGKVGGMVCPL 363 (413)
Q Consensus 321 ~~~~~~~~~~~~~~~e~~p~~~r~~-~~g~~~~~~~~~~~~~p~ 363 (413)
++.....+..=++..|+..++.+.+ +++....+..+|+.++-.
T Consensus 154 ~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~ 197 (498)
T KOG0637|consen 154 VANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYA 197 (498)
T ss_pred hhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeee
Confidence 3444556667788888887777777 777777776777766543
No 305
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=33.74 E-value=1.4e+02 Score=19.47 Aligned_cols=30 Identities=7% Similarity=0.113 Sum_probs=19.5
Q ss_pred cCCChHHHHHHhhHHHHHHHHHhhcCCCCc
Q 015075 101 TRLNWRWLLAFSSVPSFALLLFYGLAPESP 130 (413)
Q Consensus 101 ~~~~Wr~~f~~~~i~~~~~~~~~~~~pEsp 130 (413)
..++++...+++.+.+++...+...+|+++
T Consensus 27 ~~~n~~~~~Ii~vi~~i~~~~~~~~i~~~~ 56 (57)
T PF11151_consen 27 VTYNFTTAAIIAVIFGIIVANIIAVIPKKS 56 (57)
T ss_pred CCCChHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 457888877777777766655555555443
No 306
>PF10225 DUF2215: Uncharacterized conserved protein (DUF2215); InterPro: IPR024233 This entry represents a domain that is found in a number of different proteins, including a family of transmembrane proteins.
Probab=33.41 E-value=3.2e+02 Score=24.15 Aligned_cols=22 Identities=18% Similarity=0.051 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHhhcccccccCc
Q 015075 381 FEVVFVLAIASSLLFPFETMGR 402 (413)
Q Consensus 381 ~~~~~~~~~~~~~~~~~et~~~ 402 (413)
..+.+++...+++..-|.+..+
T Consensus 104 v~~~G~vsf~vcy~~gp~~~~r 125 (249)
T PF10225_consen 104 VLVVGLVSFAVCYRYGPPVDPR 125 (249)
T ss_pred HHHHHHHHHHhhcccCCCccHh
Confidence 3344556666666555555443
No 307
>COG4291 Predicted membrane protein [Function unknown]
Probab=32.52 E-value=97 Score=26.05 Aligned_cols=17 Identities=47% Similarity=0.628 Sum_probs=10.8
Q ss_pred cCC-CCchHHhhccChHH
Q 015075 125 LAP-ESPRYLCAKARTVD 141 (413)
Q Consensus 125 ~~p-Esp~~l~~~~~~~~ 141 (413)
.+| -||+++.++.+.+|
T Consensus 65 ~lp~~tp~~l~a~Ar~~D 82 (228)
T COG4291 65 RLPRLTPSYLKAHARRED 82 (228)
T ss_pred hcccCCHHHHHHhccccC
Confidence 344 48888877665544
No 308
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=29.68 E-value=1.7e+02 Score=21.92 Aligned_cols=19 Identities=16% Similarity=0.051 Sum_probs=12.7
Q ss_pred HHHHHHHHHHh-ChhHHHHH
Q 015075 273 LILSAIIVDKI-GRKLSMVL 291 (413)
Q Consensus 273 ~~~~g~l~dr~-grr~~~~~ 291 (413)
....||+.||+ |.++..++
T Consensus 59 Ga~iG~llD~~agTsPwglI 78 (116)
T COG5336 59 GAGIGWLLDKFAGTSPWGLI 78 (116)
T ss_pred HHHHHHHHHHhcCCCcHHHH
Confidence 45678999996 55554444
No 309
>PF06341 DUF1056: Protein of unknown function (DUF1056); InterPro: IPR009406 This entry is represented by Bacteriophage bIL286, Orf42. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several putative head-tail joining bacteriophage proteins.
Probab=29.62 E-value=1.2e+02 Score=20.24 Aligned_cols=38 Identities=16% Similarity=0.169 Sum_probs=23.9
Q ss_pred cccHHHHHHHHHHhhhcccchhHHHHHHHhhccCCCcc
Q 015075 38 SPNYVSLVIFRCFVGVGLGGVPVFLAYFLEFVPVSHRG 75 (413)
Q Consensus 38 a~~~~~l~~~R~l~G~~~g~~~~~~~~~~E~~p~~~Rg 75 (413)
.-+++.+...-..-+++.|..-....+++|..+.+++|
T Consensus 25 ~i~it~F~~n~~~g~i~i~I~l~l~G~isE~i~~~Kgg 62 (63)
T PF06341_consen 25 FINITAFLINQIAGLISIGITLFLAGLISEFISKQKGG 62 (63)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 33555555555555566654445567888998886655
No 310
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=29.30 E-value=1.1e+02 Score=30.73 Aligned_cols=60 Identities=15% Similarity=0.078 Sum_probs=48.3
Q ss_pred cHHHHHHHHHHhhhcccchh-HHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHHHHHHH
Q 015075 40 NYVSLVIFRCFVGVGLGGVP-VFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVV 99 (413)
Q Consensus 40 ~~~~l~~~R~l~G~~~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~l 99 (413)
|..+++-=-++.|+++.... ...-+.-+-+|++.|+..++++.....+|..+...+....
T Consensus 457 Si~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sMkS~~~al~l~t~a~G~~lss~Lv~~v 517 (571)
T KOG1237|consen 457 SILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESMKSVATALWLLTVAVGNYLSSVLVSLV 517 (571)
T ss_pred eHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46677777789999987654 4456677789999999999999999999999887776554
No 311
>smart00793 AgrB Accessory gene regulator B. The accessory gene regulator (agr) of Staphylococcus aureus is the central regulatory system that controls the gene expression for a large set of virulence factors. The arg locus consists of two transcripts: RNAII and RNAIII. RNAII encodes four genes (agrA, B, C, and D) whose gene products assemble a quorum sensing system. At low cell density, the agr genes are continuously expressed at basal levels. A signal molecule, autoinducing peptide (AIP), produced and secreted by the bacteria, accumulates outside of the cells. When the cell density increases and the AIP concentration reaches a threshold, it activates the agr response, i.e. activation of secreted protein gene expression and subsequent repression of cell wall-associated protein genes. AgrB and AgrD are essential for the production of the autoinducing peptide which functions as a signal for quorum sensing. AgrB is a transmembrane protein PUBMED:11195102. AgrB is involved in the proteolyt
Probab=28.17 E-value=1.4e+02 Score=24.81 Aligned_cols=24 Identities=8% Similarity=0.050 Sum_probs=15.1
Q ss_pred HHHHHHhh-cccccccCcchhhhhh
Q 015075 386 VLAIASSL-LFPFETMGRELKDTVD 409 (413)
Q Consensus 386 ~~~~~~~~-~~~~et~~~~l~~~~~ 409 (413)
+++.+..+ +-|-||++||+.++++
T Consensus 109 i~s~~~i~~~APv~~~~kpi~~~e~ 133 (184)
T smart00793 109 LIGLVLIYIYAPADTEKQPVIPEKL 133 (184)
T ss_pred HHHHHHHHhcCCcccccCCCCCHHH
Confidence 33444444 4455999999876554
No 312
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=23.24 E-value=2.4e+02 Score=22.30 Aligned_cols=22 Identities=23% Similarity=0.291 Sum_probs=16.5
Q ss_pred ccccccchhhhHHHHHHhhhhh
Q 015075 335 PEIYPTSARTTGFGVASSLGKV 356 (413)
Q Consensus 335 ~e~~p~~~r~~~~g~~~~~~~~ 356 (413)
.|++|+..|....+..+...+.
T Consensus 61 kdi~P~~~R~~i~~~~~~~~~~ 82 (137)
T PF04281_consen 61 KDIFPPSVRNWISSTVSTTSSA 82 (137)
T ss_pred hccCCHHHHHHHHHHHHHHHHH
Confidence 5999999998877776654433
No 313
>PF14362 DUF4407: Domain of unknown function (DUF4407)
Probab=22.68 E-value=1.7e+02 Score=26.60 Aligned_cols=11 Identities=9% Similarity=0.220 Sum_probs=5.5
Q ss_pred cCCCcchHHHH
Q 015075 70 PVSHRGRWMVA 80 (413)
Q Consensus 70 p~~~Rg~~~~~ 80 (413)
+|++|.+..++
T Consensus 8 ~~~er~k~~~~ 18 (301)
T PF14362_consen 8 SPAERNKYAGI 18 (301)
T ss_pred ChHHHHHHHHH
Confidence 45555554443
No 314
>TIGR00751 menA 1,4-dihydroxy-2-naphthoate octaprenyltransferase. This membrane-associated enzyme converts 1,4-dihydroxy-2-naphthoic acid (DHNA) to demethylmenaquinone, a step in menaquinone biosynthesis.
Probab=22.50 E-value=5.8e+02 Score=23.02 Aligned_cols=18 Identities=17% Similarity=0.226 Sum_probs=12.1
Q ss_pred hHHHHHHHhhccCCCcch
Q 015075 59 PVFLAYFLEFVPVSHRGR 76 (413)
Q Consensus 59 ~~~~~~~~E~~p~~~Rg~ 76 (413)
..++.|...-.|-++||.
T Consensus 120 ~~~~~Yt~gP~~l~y~gL 137 (284)
T TIGR00751 120 AAAITYTVGSKPYGYAGL 137 (284)
T ss_pred HHhHhhcCCCCccccCch
Confidence 345666666677788874
No 315
>PF11460 DUF3007: Protein of unknown function (DUF3007); InterPro: IPR021562 This is a family of uncharacterised proteins found in bacteria and eukaryotes.
Probab=22.30 E-value=1.5e+02 Score=22.05 Aligned_cols=29 Identities=21% Similarity=0.099 Sum_probs=20.2
Q ss_pred HHHHHHHHhhcccccccCcchhhhhhhhc
Q 015075 384 VFVLAIASSLLFPFETMGRELKDTVDAIE 412 (413)
Q Consensus 384 ~~~~~~~~~~~~~~et~~~~l~~~~~~~~ 412 (413)
+.+++-+..|++.--|++.+..+..+|.|
T Consensus 44 ~glvgW~~sYlfRV~t~~MTy~~Q~k~Ye 72 (104)
T PF11460_consen 44 LGLVGWVSSYLFRVVTGKMTYMQQRKDYE 72 (104)
T ss_pred HHHHHHHhHHHhhhccCCCcHHHHHHHHH
Confidence 33466677778877888887777766654
No 316
>PF04647 AgrB: Accessory gene regulator B; InterPro: IPR006741 The accessory gene regulator (agr) of Staphylococcus aureus is the central regulatory system that controls the gene expression for a large set of virulence factors. The arg locus consists of two transcripts: RNAII and RNAIII. RNAII encodes four genes (agrA, B, C, and D) whose gene products assemble a quorum sensing system. At low cell density, the agr genes are continuously expressed at basal levels. A signal molecule, autoinducing peptide (AIP), produced and secreted by the bacteria, accumulates outside of the cells. When the cell density increases and the AIP concentration reaches a threshold, it activates the agr response, i.e. activation of secreted protein gene expression and subsequent repression of cell wall-associated protein genes. AgrB and AgrD are essential for the production of the autoinducing peptide which functions as a signal for quorum sensing. AgrB is a transmembrane protein [] involved in the proteolytic processing of AgrD, and may have both proteolytic and transporter activities, facilitating the export of the processed AgrD peptide []. ; GO: 0016020 membrane
Probab=21.93 E-value=1.8e+02 Score=24.03 Aligned_cols=24 Identities=17% Similarity=0.379 Sum_probs=14.7
Q ss_pred HHHHHHHhh-cccccccCcchhhhh
Q 015075 385 FVLAIASSL-LFPFETMGRELKDTV 408 (413)
Q Consensus 385 ~~~~~~~~~-~~~~et~~~~l~~~~ 408 (413)
.+++.+..+ +-|-|+++||+++++
T Consensus 108 ~~~~~~~i~~~aPv~~~~kpl~~~e 132 (185)
T PF04647_consen 108 FIISFIIIIIYAPVDTPNKPLDSEE 132 (185)
T ss_pred HHHHHHHHHHhcccccccCcCChHH
Confidence 334444444 445599999996555
No 317
>PF13829 DUF4191: Domain of unknown function (DUF4191)
Probab=21.58 E-value=2.5e+02 Score=24.29 Aligned_cols=70 Identities=13% Similarity=0.047 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhHHHHHHH--HHhhcCCCCchHHhhccChHHHHHHHHHHHH
Q 015075 79 VALSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFALL--LFYGLAPESPRYLCAKARTVDAHRILEKMAF 151 (413)
Q Consensus 79 ~~~~~~~~~G~~~~~~l~~~l~~~~~Wr~~f~~~~i~~~~~~--~~~~~~pEsp~~l~~~~~~~~a~~~~~~~~~ 151 (413)
..+..+..++.+...++-+++ +++.|.+.+.+++..++. +++-.--|...|-.-+++.-.|..+++.++.
T Consensus 28 ~~~ml~a~l~~~~v~v~ig~l---~~~~~~~~i~gi~~g~l~am~vl~rra~ra~Y~qieGqpGAa~avL~~lr~ 99 (224)
T PF13829_consen 28 PWLMLGAFLGPIAVFVLIGLL---FGSWWYWLIIGILLGLLAAMIVLSRRAQRAAYAQIEGQPGAAGAVLDNLRR 99 (224)
T ss_pred HHHHHHHHHHHHHHHHHHHHH---HccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHhhcC
Confidence 444444445544443333333 345566666666654332 2222233555565556777677777766543
No 318
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=21.23 E-value=3e+02 Score=24.36 Aligned_cols=35 Identities=9% Similarity=0.001 Sum_probs=18.1
Q ss_pred heecccccccchhhhHHHHHHhhhhhhHhHHHHHH
Q 015075 331 TIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVA 365 (413)
Q Consensus 331 ~~~~~e~~p~~~r~~~~g~~~~~~~~~~~~~p~~~ 365 (413)
|+..+-..-+-.|..|.|+...+....+.+..+..
T Consensus 65 W~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~ 99 (254)
T PF07857_consen 65 WATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWAS 99 (254)
T ss_pred hhcCceeehhHhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 33334444455566666666665555444444443
No 319
>PRK10697 DNA-binding transcriptional activator PspC; Provisional
Probab=20.96 E-value=1.4e+02 Score=22.93 Aligned_cols=13 Identities=8% Similarity=0.038 Sum_probs=8.7
Q ss_pred HHHhhcCCCCchH
Q 015075 120 LLFYGLAPESPRY 132 (413)
Q Consensus 120 ~~~~~~~pEsp~~ 132 (413)
++.++.+|+.|..
T Consensus 57 i~l~~~lp~~P~~ 69 (118)
T PRK10697 57 IILSFALDPMPDN 69 (118)
T ss_pred HHHHHhccCCccc
Confidence 4566778887753
Done!