BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015076
(413 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 216 bits (550), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 113/300 (37%), Positives = 179/300 (59%), Gaps = 4/300 (1%)
Query: 58 PEVSHLGWGHWYTLRELEVSTNGFSDDKXXXXXXXXXXXXXXXXDNSKVAVKNLLNNRGQ 117
PEV HLG ++LREL+V+++ FS+ D + VAVK L R Q
Sbjct: 18 PEV-HLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQ 76
Query: 118 A-EREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPL 176
E +F+ EVE I H+NL+RL G+C R+LVY Y+ NG++ L PL
Sbjct: 77 GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPL 136
Query: 177 TWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSES 236
W R I LG+A+GL+YLH+ +PK++HRD+K++NIL+D+ + V DFGLAKL+ +
Sbjct: 137 DWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 196
Query: 237 SYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVDYSRPP--EEVNL 294
++ V GT G++APEY STG +E++DV+ +G++++E+I+G+ D +R ++V L
Sbjct: 197 XHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVML 256
Query: 295 IEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNAQKRPKMGHVVHMLEA 354
++W+K ++ + E ++D L +++++ VAL C + +RPKM VV MLE
Sbjct: 257 LDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 316
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 211 bits (537), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 111/300 (37%), Positives = 176/300 (58%), Gaps = 4/300 (1%)
Query: 58 PEVSHLGWGHWYTLRELEVSTNGFSDDKXXXXXXXXXXXXXXXXDNSKVAVKNLLNNRGQ 117
PEV HLG ++LREL+V+++ F + D VAVK L R Q
Sbjct: 10 PEV-HLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQ 68
Query: 118 A-EREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPL 176
E +F+ EVE I H+NL+RL G+C R+LVY Y+ NG++ L PL
Sbjct: 69 GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPL 128
Query: 177 TWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSES 236
W R I LG+A+GL+YLH+ +PK++HRD+K++NIL+D+ + V DFGLAKL+ +
Sbjct: 129 DWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 188
Query: 237 SYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVDYSRPP--EEVNL 294
++ V G G++APEY STG +E++DV+ +G++++E+I+G+ D +R ++V L
Sbjct: 189 XHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVML 248
Query: 295 IEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNAQKRPKMGHVVHMLEA 354
++W+K ++ + E ++D L +++++ VAL C + +RPKM VV MLE
Sbjct: 249 LDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 184 bits (467), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 107/285 (37%), Positives = 164/285 (57%), Gaps = 6/285 (2%)
Query: 71 LRELEVSTNGFSDDKXXXXXXXXXXXXXXXXDNSKVAVKNLLNNRGQAEREFKVEVEAIG 130
L +LE +TN F D +KVA+K Q EF+ E+E +
Sbjct: 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLS 90
Query: 131 RVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAK 190
RH +LV L+G+C E +L+Y+Y+ NGNL++ L+G P ++WE R+ I +G A+
Sbjct: 91 FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAAR 150
Query: 191 GLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSE--SSYITTRVMGTFG 248
GL YLH ++HRD+KS NIL+D+++ PK++DFG++K G+E +++ V GT G
Sbjct: 151 GLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISKK-GTELDQTHLXXVVKGTLG 206
Query: 249 YVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVDYSRPPEEVNLIEWLKKMVTNRNPE 308
Y+ PEY G L E+SDVYSFG+++ EV+ R + S P E VNL EW + N E
Sbjct: 207 YIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLE 266
Query: 309 GVLDPKLPEKPTSRLLKRILLVALRCVDPNAQKRPKMGHVVHMLE 353
++DP L +K L++ A++C+ +++ RP MG V+ LE
Sbjct: 267 QIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 184 bits (467), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 107/285 (37%), Positives = 164/285 (57%), Gaps = 6/285 (2%)
Query: 71 LRELEVSTNGFSDDKXXXXXXXXXXXXXXXXDNSKVAVKNLLNNRGQAEREFKVEVEAIG 130
L +LE +TN F D +KVA+K Q EF+ E+E +
Sbjct: 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLS 90
Query: 131 RVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAK 190
RH +LV L+G+C E +L+Y+Y+ NGNL++ L+G P ++WE R+ I +G A+
Sbjct: 91 FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAAR 150
Query: 191 GLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSE--SSYITTRVMGTFG 248
GL YLH ++HRD+KS NIL+D+++ PK++DFG++K G+E +++ V GT G
Sbjct: 151 GLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISKK-GTELGQTHLXXVVKGTLG 206
Query: 249 YVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVDYSRPPEEVNLIEWLKKMVTNRNPE 308
Y+ PEY G L E+SDVYSFG+++ EV+ R + S P E VNL EW + N E
Sbjct: 207 YIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLE 266
Query: 309 GVLDPKLPEKPTSRLLKRILLVALRCVDPNAQKRPKMGHVVHMLE 353
++DP L +K L++ A++C+ +++ RP MG V+ LE
Sbjct: 267 QIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/259 (34%), Positives = 150/259 (57%), Gaps = 16/259 (6%)
Query: 102 DNSKVAVKNLLN----NRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYV 157
+N+ VAVK L + +++F E++ + + +H+NLV LLG+ ++G LVY Y+
Sbjct: 53 NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYM 112
Query: 158 NNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
NG+L L G PL+W +R I G A G+++LHE +HRDIKS+NIL+D+
Sbjct: 113 PNGSLLDRLSCLDGT-PPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDE 168
Query: 218 HWNPKVSDFGLAKLLGSE---SSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIM 274
+ K+SDFGLA+ SE + + +R++GT Y+APE A G + +SD+YSFG++++
Sbjct: 169 AFTAKISDFGLAR--ASEKFAQTVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLL 225
Query: 275 EVISGRIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRC 334
E+I+G VD R P+ + L + + E +D K+ + ++ ++ + VA +C
Sbjct: 226 EIITGLPAVDEHREPQLL-LDIKEEIEDEEKTIEDYIDKKMNDADSTS-VEAMYSVASQC 283
Query: 335 VDPNAQKRPKMGHVVHMLE 353
+ KRP + V +L+
Sbjct: 284 LHEKKNKRPDIKKVQQLLQ 302
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 89/259 (34%), Positives = 149/259 (57%), Gaps = 16/259 (6%)
Query: 102 DNSKVAVKNLLN----NRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYV 157
+N+ VAVK L + +++F E++ + + +H+NLV LLG+ ++G LVY Y+
Sbjct: 53 NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYM 112
Query: 158 NNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
NG+L L G PL+W +R I G A G+++LHE +HRDIKS+NIL+D+
Sbjct: 113 PNGSLLDRLSCLDGT-PPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDE 168
Query: 218 HWNPKVSDFGLAKLLGSE---SSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIM 274
+ K+SDFGLA+ SE + + R++GT Y+APE A G + +SD+YSFG++++
Sbjct: 169 AFTAKISDFGLAR--ASEKFAQTVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLL 225
Query: 275 EVISGRIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRC 334
E+I+G VD R P+ + L + + E +D K+ + ++ ++ + VA +C
Sbjct: 226 EIITGLPAVDEHREPQLL-LDIKEEIEDEEKTIEDYIDKKMNDADSTS-VEAMYSVASQC 283
Query: 335 VDPNAQKRPKMGHVVHMLE 353
+ KRP + V +L+
Sbjct: 284 LHEKKNKRPDIKKVQQLLQ 302
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/259 (34%), Positives = 148/259 (57%), Gaps = 16/259 (6%)
Query: 102 DNSKVAVKNLLN----NRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYV 157
+N+ VAVK L + +++F E++ + + +H+NLV LLG+ ++G LVY Y+
Sbjct: 47 NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYM 106
Query: 158 NNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
NG+L L G PL+W +R I G A G+++LHE +HRDIKS+NIL+D+
Sbjct: 107 PNGSLLDRLSCLDGT-PPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDE 162
Query: 218 HWNPKVSDFGLAKLLGSE---SSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIM 274
+ K+SDFGLA+ SE + R++GT Y+APE A G + +SD+YSFG++++
Sbjct: 163 AFTAKISDFGLAR--ASEKFAQXVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLL 219
Query: 275 EVISGRIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRC 334
E+I+G VD R P+ + L + + E +D K+ + ++ ++ + VA +C
Sbjct: 220 EIITGLPAVDEHREPQLL-LDIKEEIEDEEKTIEDYIDKKMNDADSTS-VEAMYSVASQC 277
Query: 335 VDPNAQKRPKMGHVVHMLE 353
+ KRP + V +L+
Sbjct: 278 LHEKKNKRPDIKKVQQLLQ 296
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 87/257 (33%), Positives = 142/257 (55%), Gaps = 12/257 (4%)
Query: 102 DNSKVAVKNLLN----NRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYV 157
+N+ VAVK L + +++F E++ + +H+NLV LLG+ ++G LVY Y
Sbjct: 44 NNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYX 103
Query: 158 NNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
NG+L L G PL+W R I G A G+++LHE +HRDIKS+NIL+D+
Sbjct: 104 PNGSLLDRLSCLDGT-PPLSWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDE 159
Query: 218 HWNPKVSDFGLAKLLGSESSYI-TTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEV 276
+ K+SDFGLA+ + + +R++GT Y APE A G + +SD+YSFG++++E+
Sbjct: 160 AFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEI 218
Query: 277 ISGRIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVD 336
I+G VD R P+ + L + + E +D K + ++ ++ VA +C+
Sbjct: 219 ITGLPAVDEHREPQLL-LDIKEEIEDEEKTIEDYIDKKXNDADSTS-VEAXYSVASQCLH 276
Query: 337 PNAQKRPKMGHVVHMLE 353
KRP + V +L+
Sbjct: 277 EKKNKRPDIKKVQQLLQ 293
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 107/182 (58%), Gaps = 7/182 (3%)
Query: 104 SKVAVKNLLNNRGQAER--EFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
S VAVK L+ AER EF EV + R+RH N+V +G + + +V EY++ G+
Sbjct: 61 SDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGS 120
Query: 162 LEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
L + LH G L R+++ AKG++YLH P +VHRD+KS N+L+DK +
Sbjct: 121 LYRLLHKS-GAREQLDERRRLSMAYDVAKGMNYLHNR-NPPIVHRDLKSPNLLVDKKYTV 178
Query: 222 KVSDFGLAKLLGSESSYITTR-VMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGR 280
KV DFGL++L S ++ ++ GT ++APE NE+SDVYSFG+++ E+ + +
Sbjct: 179 KVCDFGLSRL--KASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQ 236
Query: 281 IP 282
P
Sbjct: 237 QP 238
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 109/182 (59%), Gaps = 7/182 (3%)
Query: 104 SKVAVKNLLNNRGQAER--EFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
S VAVK L+ AER EF EV + R+RH N+V +G + + +V EY++ G+
Sbjct: 61 SDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGS 120
Query: 162 LEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
L + LH G L R+++ AKG++YLH P +VHR++KS N+L+DK +
Sbjct: 121 LYRLLHKS-GAREQLDERRRLSMAYDVAKGMNYLHNR-NPPIVHRNLKSPNLLVDKKYTV 178
Query: 222 KVSDFGLAKLLGSESSYITTR-VMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGR 280
KV DFGL++L S++++++ GT ++APE NE+SDVYSFG+++ E+ + +
Sbjct: 179 KVCDFGLSRL--KASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQ 236
Query: 281 IP 282
P
Sbjct: 237 QP 238
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 96/185 (51%), Gaps = 14/185 (7%)
Query: 103 NSKVAVKNLL---NNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNN 159
N KVA+K + + + + F+ EV ++ H+N+V ++ E LV EY+
Sbjct: 36 NIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEG 95
Query: 160 GNLEQWL--HGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
L +++ HG PL+ + +N G+ + H+ ++VHRDIK NILID
Sbjct: 96 PTLSEYIESHG------PLSVDTAINFTNQILDGIKHAHD---MRIVHRDIKPQNILIDS 146
Query: 218 HWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVI 277
+ K+ DFG+AK L S T V+GT Y +PE A +E +D+YS GI++ E++
Sbjct: 147 NKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEML 206
Query: 278 SGRIP 282
G P
Sbjct: 207 VGEPP 211
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 98/184 (53%), Gaps = 8/184 (4%)
Query: 102 DNSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+ KVA+K + +E +F E E + ++ H LV+L G C E A LV+E++ +G
Sbjct: 28 NKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGC 86
Query: 162 LEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
L +L G + E + + L +G++YL E V+HRD+ + N L+ ++
Sbjct: 87 LSDYLRTQRGLFAA---ETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVI 140
Query: 222 KVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GR 280
KVSDFG+ + + + +T + +PE S + +SDV+SFG+L+ EV S G+
Sbjct: 141 KVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGK 200
Query: 281 IPVD 284
IP +
Sbjct: 201 IPYE 204
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 120/240 (50%), Gaps = 17/240 (7%)
Query: 102 DNSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+ KVA+K + +E +F E E + ++ H LV+L G C E A LV+E++ +G
Sbjct: 30 NKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGC 88
Query: 162 LEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
L +L G + E + + L +G++YL E V+HRD+ + N L+ ++
Sbjct: 89 LSDYLRTQRGLFAA---ETLLGMCLDVCEGMAYLEEA---SVIHRDLAARNCLVGENQVI 142
Query: 222 KVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GR 280
KVSDFG+ + + + +T + +PE S + +SDV+SFG+L+ EV S G+
Sbjct: 143 KVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGK 202
Query: 281 IPVDYSRPPEEVNLIE----WLKKMVTNRNPEGVLDPKLPEKP-----TSRLLKRILLVA 331
IP + E V I K + + + +++ E+P SRLL+++ +A
Sbjct: 203 IPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAAIA 262
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 98/184 (53%), Gaps = 8/184 (4%)
Query: 102 DNSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+ KVA+K + +E +F E E + ++ H LV+L G C E A LV+E++ +G
Sbjct: 30 NKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGC 88
Query: 162 LEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
L +L G + E + + L +G++YL E V+HRD+ + N L+ ++
Sbjct: 89 LSDYLRTQRGLFAA---ETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVI 142
Query: 222 KVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GR 280
KVSDFG+ + + + +T + +PE S + +SDV+SFG+L+ EV S G+
Sbjct: 143 KVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGK 202
Query: 281 IPVD 284
IP +
Sbjct: 203 IPYE 206
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 98/184 (53%), Gaps = 8/184 (4%)
Query: 102 DNSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+ KVA+K + +E +F E E + ++ H LV+L G C E A LV+E++ +G
Sbjct: 33 NKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGC 91
Query: 162 LEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
L +L G + E + + L +G++YL E V+HRD+ + N L+ ++
Sbjct: 92 LSDYLRTQRGLFAA---ETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVI 145
Query: 222 KVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GR 280
KVSDFG+ + + + +T + +PE S + +SDV+SFG+L+ EV S G+
Sbjct: 146 KVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGK 205
Query: 281 IPVD 284
IP +
Sbjct: 206 IPYE 209
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 98/184 (53%), Gaps = 8/184 (4%)
Query: 102 DNSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+ KVA+K + +E +F E E + ++ H LV+L G C E A LV+E++ +G
Sbjct: 50 NKDKVAIKTI-KEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGC 108
Query: 162 LEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
L +L G + E + + L +G++YL E V+HRD+ + N L+ ++
Sbjct: 109 LSDYLRTQRGLFAA---ETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVI 162
Query: 222 KVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GR 280
KVSDFG+ + + + +T + +PE S + +SDV+SFG+L+ EV S G+
Sbjct: 163 KVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGK 222
Query: 281 IPVD 284
IP +
Sbjct: 223 IPYE 226
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 97/184 (52%), Gaps = 8/184 (4%)
Query: 102 DNSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+ KVA+K + +E +F E E + ++ H LV+L G C E A LV E++ +G
Sbjct: 31 NKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGC 89
Query: 162 LEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
L +L G + E + + L +G++YL E V+HRD+ + N L+ ++
Sbjct: 90 LSDYLRTQRGLFAA---ETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVI 143
Query: 222 KVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GR 280
KVSDFG+ + + + +T + +PE S + +SDV+SFG+L+ EV S G+
Sbjct: 144 KVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGK 203
Query: 281 IPVD 284
IP +
Sbjct: 204 IPYE 207
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 132/266 (49%), Gaps = 39/266 (14%)
Query: 102 DNSKVAVKNLL--NNRGQAE-----REFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVY 154
D S VA+K+L+ ++ G+ E +EF+ EV + + H N+V+L G RM V
Sbjct: 43 DKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYG-LMHNPPRM-VM 100
Query: 155 EYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNIL 214
E+V G+L H + P+ W +++ ++L A G+ Y+ + P +VHRD++S NI
Sbjct: 101 EFVPCGDL---YHRLLDKAHPIKWSVKLRLMLDIALGIEYM-QNQNPPIVHRDLRSPNIF 156
Query: 215 I-----DKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEY--ASTGMLNERSDVY 267
+ + KV+DFGL++ +S + + ++G F ++APE A E++D Y
Sbjct: 157 LQSLDENAPVCAKVADFGLSQ----QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTY 212
Query: 268 SFGILIMEVISGRIPVD-YSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKR 326
SF +++ +++G P D YS + K N E L P +PE RL
Sbjct: 213 SFAMILYTILTGEGPFDEYS----------YGKIKFINMIREEGLRPTIPEDCPPRLRNV 262
Query: 327 ILLVALRCVDPNAQKRPKMGHVVHML 352
I L C + +KRP ++V L
Sbjct: 263 IEL----CWSGDPKKRPHFSYIVKEL 284
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 126/251 (50%), Gaps = 24/251 (9%)
Query: 106 VAVKNLLNNRGQAER-EFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K L + +R +F E +G+ H N++RL G ++ M++ EY+ NG L++
Sbjct: 76 VAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDK 135
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
+L G S L + ++ G A G+ YL VHRD+ + NIL++ + KVS
Sbjct: 136 FLREKDGEFSVLQL---VGMLRGIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVS 189
Query: 225 DFGLAKLL--GSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIP 282
DFGL+++L E++Y T+ + APE S SDV+SFGI++ EV++
Sbjct: 190 DFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYG-- 247
Query: 283 VDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNAQKR 342
RP E++ E +K + +G P + P++ I + ++C +R
Sbjct: 248 ---ERPYWELSNHEVMKAI-----NDGFRLPTPMDCPSA-----IYQLMMQCWQQERARR 294
Query: 343 PKMGHVVHMLE 353
PK +V +L+
Sbjct: 295 PKFADIVSILD 305
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 131/266 (49%), Gaps = 39/266 (14%)
Query: 102 DNSKVAVKNLL--NNRGQAE-----REFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVY 154
D S VA+K+L+ ++ G+ E +EF+ EV + + H N+V+L G RM V
Sbjct: 43 DKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYG-LMHNPPRM-VM 100
Query: 155 EYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNIL 214
E+V G+L H + P+ W +++ ++L A G+ Y+ + P +VHRD++S NI
Sbjct: 101 EFVPCGDL---YHRLLDKAHPIKWSVKLRLMLDIALGIEYM-QNQNPPIVHRDLRSPNIF 156
Query: 215 I-----DKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEY--ASTGMLNERSDVY 267
+ + KV+DFG ++ +S + + ++G F ++APE A E++D Y
Sbjct: 157 LQSLDENAPVCAKVADFGTSQ----QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTY 212
Query: 268 SFGILIMEVISGRIPVD-YSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKR 326
SF +++ +++G P D YS + K N E L P +PE RL
Sbjct: 213 SFAMILYTILTGEGPFDEYS----------YGKIKFINMIREEGLRPTIPEDCPPRLRNV 262
Query: 327 ILLVALRCVDPNAQKRPKMGHVVHML 352
I L C + +KRP ++V L
Sbjct: 263 IEL----CWSGDPKKRPHFSYIVKEL 284
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 131/266 (49%), Gaps = 39/266 (14%)
Query: 102 DNSKVAVKNLL--NNRGQAE-----REFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVY 154
D S VA+K+L+ ++ G+ E +EF+ EV + + H N+V+L G RM V
Sbjct: 43 DKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYG-LMHNPPRM-VM 100
Query: 155 EYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNIL 214
E+V G+L H + P+ W +++ ++L A G+ Y+ + P +VHRD++S NI
Sbjct: 101 EFVPCGDL---YHRLLDKAHPIKWSVKLRLMLDIALGIEYM-QNQNPPIVHRDLRSPNIF 156
Query: 215 I-----DKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEY--ASTGMLNERSDVY 267
+ + KV+DF L++ +S + + ++G F ++APE A E++D Y
Sbjct: 157 LQSLDENAPVCAKVADFSLSQ----QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTY 212
Query: 268 SFGILIMEVISGRIPVD-YSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKR 326
SF +++ +++G P D YS + K N E L P +PE RL
Sbjct: 213 SFAMILYTILTGEGPFDEYS----------YGKIKFINMIREEGLRPTIPEDCPPRLRNV 262
Query: 327 ILLVALRCVDPNAQKRPKMGHVVHML 352
I L C + +KRP ++V L
Sbjct: 263 IEL----CWSGDPKKRPHFSYIVKEL 284
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 118/263 (44%), Gaps = 35/263 (13%)
Query: 106 VAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQW 165
+ +K L+ + +R F EV+ + + H N+++ +G + + EY+ G L
Sbjct: 38 MVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGI 97
Query: 166 LHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSD 225
+ S W R++ A G++YLH ++HRD+ S N L+ ++ N V+D
Sbjct: 98 IKSMD---SQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVAD 151
Query: 226 FGLAKLLGSESSY-------------ITTRVMGTFGYVAPEYASTGMLNERSDVYSFGIL 272
FGLA+L+ E + V+G ++APE + +E+ DV+SFGI+
Sbjct: 152 FGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIV 211
Query: 273 IMEVISGRIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEK-PTSRLLKRILLVA 331
+ E+I GR+ D P ++ N G LD P P S +
Sbjct: 212 LCEII-GRVNADPDYLPRTMDF---------GLNVRGFLDRYCPPNCPPS-----FFPIT 256
Query: 332 LRCVDPNAQKRPKMGHVVHMLEA 354
+RC D + +KRP + H LE
Sbjct: 257 VRCCDLDPEKRPSFVKLEHWLET 279
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 127/254 (50%), Gaps = 28/254 (11%)
Query: 103 NSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
++VA+K L E F E + + ++RH+ LV+L +E +V EY+N G+L
Sbjct: 39 TTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMNKGSL 96
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
+L G+ G L + M+ + A G++Y+ VHRD++++NIL+ ++ K
Sbjct: 97 LDFLKGETGKYLRLPQLVDMSAQI--ASGMAYVERM---NYVHRDLRAANILVGENLVCK 151
Query: 223 VSDFGLAKLLGSESSYITTRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
V+DFGLA+L+ E + T R F + APE A G +SDV+SFGIL+ E+ + G
Sbjct: 152 VADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKG 209
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNA 339
R+P P VN + V ++ G P PE P S + + +C
Sbjct: 210 RVPY-----PGMVN------REVLDQVERGYRMPCPPECPES-----LHDLMCQCWRKEP 253
Query: 340 QKRPKMGHVVHMLE 353
++RP ++ LE
Sbjct: 254 EERPTFEYLQAFLE 267
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 96/176 (54%), Gaps = 9/176 (5%)
Query: 106 VAVKNLLNNRGQAER-EFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K L + +R +F E +G+ H N++RL G G M+V EY+ NG+L+
Sbjct: 80 VAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDT 139
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
+L G + + + ++ G G+ YL + VHRD+ + N+L+D + KVS
Sbjct: 140 FLRTHDGQFTIMQL---VGMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVS 193
Query: 225 DFGLAKLL--GSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS 278
DFGL+++L +++Y TT + APE + + SDV+SFG+++ EV++
Sbjct: 194 DFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 128/252 (50%), Gaps = 20/252 (7%)
Query: 103 NSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
++KVAVK+L + F E + +++H+ LVRL + ++ EY+ NG+L
Sbjct: 47 HTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSL 104
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
+L G LT +++ A+G++++ E +HRD++++NIL+ + K
Sbjct: 105 VDFLKTPSG--IKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCK 159
Query: 223 VSDFGLAKLLGSESSYITTRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
++DFGLA+L+ E + T R F + APE + G +SDV+SFGIL+ E+++ G
Sbjct: 160 IADFGLARLI--EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 217
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRN-PEGVLD------PKLPE-KPTSRLLKRILLVA 331
RIP PE + +E +MV N PE + + PE +PT L+ +L
Sbjct: 218 RIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 277
Query: 332 LRCVDPNAQKRP 343
+ Q +P
Sbjct: 278 FTATEGQYQPQP 289
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 127/254 (50%), Gaps = 28/254 (11%)
Query: 103 NSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
++VA+K L E F E + + ++RH+ LV+L +E +V EY+N G+L
Sbjct: 39 TTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMNKGSL 96
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
+L G+ G L + M+ + A G++Y+ VHRD++++NIL+ ++ K
Sbjct: 97 LDFLKGETGKYLRLPQLVDMSAQI--ASGMAYVERM---NYVHRDLRAANILVGENLVCK 151
Query: 223 VSDFGLAKLLGSESSYITTRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
V+DFGLA+L+ E + T R F + APE A G +SDV+SFGIL+ E+ + G
Sbjct: 152 VADFGLARLI--EDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKG 209
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNA 339
R+P P VN + V ++ G P PE P S + + +C
Sbjct: 210 RVPY-----PGMVN------REVLDQVERGYRMPCPPECPES-----LHDLMCQCWRKEP 253
Query: 340 QKRPKMGHVVHMLE 353
++RP ++ LE
Sbjct: 254 EERPTFEYLQAFLE 267
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 128/252 (50%), Gaps = 20/252 (7%)
Query: 103 NSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
++KVAVK+L + F E + +++H+ LVRL + ++ EY+ NG+L
Sbjct: 43 HTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSL 100
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
+L G LT +++ A+G++++ E +HRD++++NIL+ + K
Sbjct: 101 VDFLKTPSG--IKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCK 155
Query: 223 VSDFGLAKLLGSESSYITTRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
++DFGLA+L+ E + T R F + APE + G +SDV+SFGIL+ E+++ G
Sbjct: 156 IADFGLARLI--EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 213
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRN-PEGVLD------PKLPE-KPTSRLLKRILLVA 331
RIP PE + +E +MV N PE + + PE +PT L+ +L
Sbjct: 214 RIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 273
Query: 332 LRCVDPNAQKRP 343
+ Q +P
Sbjct: 274 FTATEGQYQPQP 285
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 128/252 (50%), Gaps = 20/252 (7%)
Query: 103 NSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
++KVAVK+L + F E + +++H+ LVRL + ++ EY+ NG+L
Sbjct: 45 HTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSL 102
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
+L G LT +++ A+G++++ E +HRD++++NIL+ + K
Sbjct: 103 VDFLKTPSG--IKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCK 157
Query: 223 VSDFGLAKLLGSESSYITTRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
++DFGLA+L+ E + T R F + APE + G +SDV+SFGIL+ E+++ G
Sbjct: 158 IADFGLARLI--EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 215
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRN-PEGVLD------PKLPE-KPTSRLLKRILLVA 331
RIP PE + +E +MV N PE + + PE +PT L+ +L
Sbjct: 216 RIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 275
Query: 332 LRCVDPNAQKRP 343
+ Q +P
Sbjct: 276 FTATEGQYQPQP 287
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 128/252 (50%), Gaps = 20/252 (7%)
Query: 103 NSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
++KVAVK+L + F E + +++H+ LVRL + ++ EY+ NG+L
Sbjct: 37 HTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSL 94
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
+L G LT +++ A+G++++ E +HRD++++NIL+ + K
Sbjct: 95 VDFLKTPSG--IKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCK 149
Query: 223 VSDFGLAKLLGSESSYITTRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
++DFGLA+L+ E + T R F + APE + G +SDV+SFGIL+ E+++ G
Sbjct: 150 IADFGLARLI--EDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 207
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRN-PEGVLD------PKLPE-KPTSRLLKRILLVA 331
RIP PE + +E +MV N PE + + PE +PT L+ +L
Sbjct: 208 RIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 267
Query: 332 LRCVDPNAQKRP 343
+ Q +P
Sbjct: 268 FTATEGQYQPQP 279
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 128/254 (50%), Gaps = 28/254 (11%)
Query: 103 NSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
++VA+K L E F E + + ++RH+ LV+L +E +V EY++ G+L
Sbjct: 42 TTRVAIKTLKPGTMSPE-AFLQEAQVMKKIRHEKLVQLYAVVSEEPI-YIVTEYMSKGSL 99
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
+L G++G L + M + A G++Y+ VHRD++++NIL+ ++ K
Sbjct: 100 LDFLKGEMGKYLRLPQLVDMAAQI--ASGMAYVERM---NYVHRDLRAANILVGENLVCK 154
Query: 223 VSDFGLAKLLGSESSYITTRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
V+DFGLA+L+ E + T R F + APE A G +SDV+SFGIL+ E+ + G
Sbjct: 155 VADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKG 212
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNA 339
R+P P VN + V ++ G P PE P S + + +C +
Sbjct: 213 RVPY-----PGMVN------REVLDQVERGYRMPCPPECPES-----LHDLMCQCWRKDP 256
Query: 340 QKRPKMGHVVHMLE 353
++RP ++ LE
Sbjct: 257 EERPTFEYLQAFLE 270
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 128/252 (50%), Gaps = 20/252 (7%)
Query: 103 NSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
++KVAVK+L + F E + +++H+ LVRL + ++ EY+ NG+L
Sbjct: 46 HTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSL 103
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
+L G LT +++ A+G++++ E +HRD++++NIL+ + K
Sbjct: 104 VDFLKTPSG--IKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCK 158
Query: 223 VSDFGLAKLLGSESSYITTRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
++DFGLA+L+ E + T R F + APE + G +SDV+SFGIL+ E+++ G
Sbjct: 159 IADFGLARLI--EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 216
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRN-PEGVLD------PKLPE-KPTSRLLKRILLVA 331
RIP PE + +E +MV N PE + + PE +PT L+ +L
Sbjct: 217 RIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 276
Query: 332 LRCVDPNAQKRP 343
+ Q +P
Sbjct: 277 FTATEGQFQPQP 288
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 97/190 (51%), Gaps = 17/190 (8%)
Query: 102 DNSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
D VAVK L A ++F+ E E + ++H+++VR G C EG ++V+EY+ +G+
Sbjct: 41 DKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGD 100
Query: 162 LEQWL--HG----------DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIK 209
L ++L HG DV P PL + + A G+ YL GL VHRD+
Sbjct: 101 LNRFLRSHGPDAKLLAGGEDVAP-GPLGLGQLLAVASQVAAGMVYL-AGLH--FVHRDLA 156
Query: 210 SSNILIDKHWNPKVSDFGLAKLLGSESSY-ITTRVMGTFGYVAPEYASTGMLNERSDVYS 268
+ N L+ + K+ DFG+++ + S Y + R M ++ PE SDV+S
Sbjct: 157 TRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWS 216
Query: 269 FGILIMEVIS 278
FG+++ E+ +
Sbjct: 217 FGVVLWEIFT 226
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 97/190 (51%), Gaps = 17/190 (8%)
Query: 102 DNSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
D VAVK L A ++F+ E E + ++H+++VR G C EG ++V+EY+ +G+
Sbjct: 47 DKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGD 106
Query: 162 LEQWL--HG----------DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIK 209
L ++L HG DV P PL + + A G+ YL GL VHRD+
Sbjct: 107 LNRFLRSHGPDAKLLAGGEDVAP-GPLGLGQLLAVASQVAAGMVYL-AGLH--FVHRDLA 162
Query: 210 SSNILIDKHWNPKVSDFGLAKLLGSESSY-ITTRVMGTFGYVAPEYASTGMLNERSDVYS 268
+ N L+ + K+ DFG+++ + S Y + R M ++ PE SDV+S
Sbjct: 163 TRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWS 222
Query: 269 FGILIMEVIS 278
FG+++ E+ +
Sbjct: 223 FGVVLWEIFT 232
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 123/256 (48%), Gaps = 28/256 (10%)
Query: 104 SKVAVKNLLNNRGQAER-EFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
S VA+K L + +R EF E +G+ H N++RL G M++ E++ NG L
Sbjct: 43 SCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGAL 102
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
+ +L + G + + + ++ G A G+ YL E VHRD+ + NIL++ + K
Sbjct: 103 DSFLRLNDGQFTVIQL---VGMLRGIASGMRYLAEM---SYVHRDLAARNILVNSNLVCK 156
Query: 223 VSDFGLAKLLGSESSYIT-TRVMG---TFGYVAPEYASTGMLNERSDVYSFGILIMEVIS 278
VSDFGL++ L SS T T +G + APE + SD +S+GI++ EV+S
Sbjct: 157 VSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMS 216
Query: 279 -GRIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDP 337
G P + +N IE ++ P P+ PTS L +++ L C
Sbjct: 217 FGERPYWDMSNQDVINAIEQDYRL-----------PPPPDCPTS--LHQLM---LDCWQK 260
Query: 338 NAQKRPKMGHVVHMLE 353
+ RP+ VV L+
Sbjct: 261 DRNARPRFPQVVSALD 276
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 123/256 (48%), Gaps = 28/256 (10%)
Query: 104 SKVAVKNLLNNRGQAER-EFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
S VA+K L + +R EF E +G+ H N++RL G M++ E++ NG L
Sbjct: 45 SCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGAL 104
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
+ +L + G + + + ++ G A G+ YL E VHRD+ + NIL++ + K
Sbjct: 105 DSFLRLNDGQFTVIQL---VGMLRGIASGMRYLAEM---SYVHRDLAARNILVNSNLVCK 158
Query: 223 VSDFGLAKLLGSESSYIT-TRVMG---TFGYVAPEYASTGMLNERSDVYSFGILIMEVIS 278
VSDFGL++ L SS T T +G + APE + SD +S+GI++ EV+S
Sbjct: 159 VSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMS 218
Query: 279 -GRIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDP 337
G P + +N IE ++ P P+ PTS L +++ L C
Sbjct: 219 FGERPYWDMSNQDVINAIEQDYRL-----------PPPPDCPTS--LHQLM---LDCWQK 262
Query: 338 NAQKRPKMGHVVHMLE 353
+ RP+ VV L+
Sbjct: 263 DRNARPRFPQVVSALD 278
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 128/252 (50%), Gaps = 20/252 (7%)
Query: 103 NSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
++KVAVK+L + F E + +++H+ LVRL + ++ EY+ NG+L
Sbjct: 37 HTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSL 94
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
+L G LT +++ A+G++++ E +HRD++++NIL+ + K
Sbjct: 95 VDFLKTPSG--IKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCK 149
Query: 223 VSDFGLAKLLGSESSYITTRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
++DFGLA+L+ E + T R F + APE + G +SDV+SFGIL+ E+++ G
Sbjct: 150 IADFGLARLI--EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 207
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRN-PEGVLD------PKLPE-KPTSRLLKRILLVA 331
RIP PE + +E +MV N PE + + PE +PT L+ +L
Sbjct: 208 RIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 267
Query: 332 LRCVDPNAQKRP 343
+ Q +P
Sbjct: 268 FTATEGQYQPQP 279
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 97/190 (51%), Gaps = 17/190 (8%)
Query: 102 DNSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
D VAVK L A ++F+ E E + ++H+++VR G C EG ++V+EY+ +G+
Sbjct: 70 DKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGD 129
Query: 162 LEQWL--HG----------DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIK 209
L ++L HG DV P PL + + A G+ YL GL VHRD+
Sbjct: 130 LNRFLRSHGPDAKLLAGGEDVAP-GPLGLGQLLAVASQVAAGMVYL-AGLH--FVHRDLA 185
Query: 210 SSNILIDKHWNPKVSDFGLAKLLGSESSY-ITTRVMGTFGYVAPEYASTGMLNERSDVYS 268
+ N L+ + K+ DFG+++ + S Y + R M ++ PE SDV+S
Sbjct: 186 TRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWS 245
Query: 269 FGILIMEVIS 278
FG+++ E+ +
Sbjct: 246 FGVVLWEIFT 255
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 111/207 (53%), Gaps = 12/207 (5%)
Query: 103 NSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
++KVAVK+L + F E + +++H+ LVRL + ++ EY+ NG+L
Sbjct: 43 HTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSL 100
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
+L G LT +++ A+G++++ E +HRD++++NIL+ + K
Sbjct: 101 VDFLKTPSG--IKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCK 155
Query: 223 VSDFGLAKLLGSESSYITTRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
++DFGLA+L+ E + T R F + APE + G +SDV+SFGIL+ E+++ G
Sbjct: 156 IADFGLARLI--EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 213
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRN 306
RIP PE + +E +MV N
Sbjct: 214 RIPYPGMTNPEVIQNLERGYRMVRPDN 240
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 111/207 (53%), Gaps = 12/207 (5%)
Query: 103 NSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
++KVAVK+L + F E + +++H+ LVRL + ++ EY+ NG+L
Sbjct: 42 HTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSL 99
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
+L G LT +++ A+G++++ E +HRD++++NIL+ + K
Sbjct: 100 VDFLKTPSG--IKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCK 154
Query: 223 VSDFGLAKLLGSESSYITTRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
++DFGLA+L+ E + T R F + APE + G +SDV+SFGIL+ E+++ G
Sbjct: 155 IADFGLARLI--EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 212
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRN 306
RIP PE + +E +MV N
Sbjct: 213 RIPYPGMTNPEVIQNLERGYRMVRPDN 239
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 129/254 (50%), Gaps = 28/254 (11%)
Query: 103 NSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
++VA+K L E F E + + ++RH+ LV+L +E +++ EY++ G+L
Sbjct: 42 TTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVI-EYMSKGSL 99
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
+L G++G L + M + A G++Y+ VHRD++++NIL+ ++ K
Sbjct: 100 LDFLKGEMGKYLRLPQLVDMAAQI--ASGMAYVERM---NYVHRDLRAANILVGENLVCK 154
Query: 223 VSDFGLAKLLGSESSYITTRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
V+DFGLA+L+ E + T R F + APE A G +SDV+SFGIL+ E+ + G
Sbjct: 155 VADFGLARLI--EDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKG 212
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNA 339
R+P P VN + V ++ G P PE P S + + +C +
Sbjct: 213 RVPY-----PGMVN------REVLDQVERGYRMPCPPECPES-----LHDLMCQCWRKDP 256
Query: 340 QKRPKMGHVVHMLE 353
++RP ++ LE
Sbjct: 257 EERPTFEYLQAFLE 270
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 129/254 (50%), Gaps = 28/254 (11%)
Query: 103 NSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
++VA+K L E F E + + ++RH+ LV+L +E +++ EY++ G+L
Sbjct: 42 TTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVI-EYMSKGSL 99
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
+L G++G L + M + A G++Y+ VHRD++++NIL+ ++ K
Sbjct: 100 LDFLKGEMGKYLRLPQLVDMAAQI--ASGMAYVERM---NYVHRDLRAANILVGENLVCK 154
Query: 223 VSDFGLAKLLGSESSYITTRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
V+DFGLA+L+ E + T R F + APE A G +SDV+SFGIL+ E+ + G
Sbjct: 155 VADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKG 212
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNA 339
R+P P VN + V ++ G P PE P S + + +C +
Sbjct: 213 RVPY-----PGMVN------REVLDQVERGYRMPCPPECPES-----LHDLMCQCWRKDP 256
Query: 340 QKRPKMGHVVHMLE 353
++RP ++ LE
Sbjct: 257 EERPTFEYLQAFLE 270
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 128/254 (50%), Gaps = 28/254 (11%)
Query: 103 NSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
++VA+K L E F E + + ++RH+ LV+L +E +V EY++ G+L
Sbjct: 33 TTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSL 90
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
+L G++G L + M + A G++Y+ VHRD++++NIL+ ++ K
Sbjct: 91 LDFLKGEMGKYLRLPQLVDMAAQI--ASGMAYVERM---NYVHRDLRAANILVGENLVCK 145
Query: 223 VSDFGLAKLLGSESSYITTRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
V+DFGLA+L+ E + T R F + APE A G +SDV+SFGIL+ E+ + G
Sbjct: 146 VADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKG 203
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNA 339
R+P P VN + V ++ G P PE P S + + +C +
Sbjct: 204 RVPY-----PGMVN------REVLDQVERGYRMPCPPECPES-----LHDLMCQCWRKDP 247
Query: 340 QKRPKMGHVVHMLE 353
++RP ++ LE
Sbjct: 248 EERPTFEYLQAFLE 261
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 111/207 (53%), Gaps = 12/207 (5%)
Query: 103 NSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
++KVAVK+L + F E + +++H+ LVRL + ++ EY+ NG+L
Sbjct: 39 HTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSL 96
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
+L G LT +++ A+G++++ E +HRD++++NIL+ + K
Sbjct: 97 VDFLKTPSG--IKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCK 151
Query: 223 VSDFGLAKLLGSESSYITTRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
++DFGLA+L+ E + T R F + APE + G +SDV+SFGIL+ E+++ G
Sbjct: 152 IADFGLARLI--EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 209
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRN 306
RIP PE + +E +MV N
Sbjct: 210 RIPYPGMTNPEVIQNLERGYRMVRPDN 236
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 111/207 (53%), Gaps = 12/207 (5%)
Query: 103 NSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
++KVAVK+L + F E + +++H+ LVRL + ++ EY+ NG+L
Sbjct: 32 HTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSL 89
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
+L G LT +++ A+G++++ E +HRD++++NIL+ + K
Sbjct: 90 VDFLKTPSG--IKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCK 144
Query: 223 VSDFGLAKLLGSESSYITTRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
++DFGLA+L+ E + T R F + APE + G +SDV+SFGIL+ E+++ G
Sbjct: 145 IADFGLARLI--EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 202
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRN 306
RIP PE + +E +MV N
Sbjct: 203 RIPYPGMTNPEVIQNLERGYRMVRPDN 229
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 130/286 (45%), Gaps = 40/286 (13%)
Query: 106 VAVKNLLNNRGQAERE-FKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K + ++ER+ F VE+ + RV H N+V+L G C LV EY G+L
Sbjct: 34 VAIKQI---ESESERKAFIVELRQLSRVNHPNIVKLYGACLNPV--CLVMEYAEGGSLYN 88
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP-KV 223
LHG P T M+ L ++G++YLH ++HRD+K N+L+ K+
Sbjct: 89 VLHG-AEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKI 147
Query: 224 SDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPV 283
DFG A + + T G+ ++APE +E+ DV+S+GI++ EVI+ R P
Sbjct: 148 CDFGTACDIQTH----MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPF 203
Query: 284 DY---------------SRPPEEVNL---IEWLKKMVTNRNPEGVLDPKLPEKPTSRLLK 325
D +RPP NL IE L +++P ++P+ +
Sbjct: 204 DEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPS--------QRPSMEEIV 255
Query: 326 RILLVALRCVDPNAQKRPKMGHVVHMLEAQESPSKEPSNSFQDRYR 371
+I+ +R P A + P H L E EP F + YR
Sbjct: 256 KIMTHLMRYF-PGADE-PLQYPCQHSLPPGEDGRVEPYVDFAEFYR 299
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 128/254 (50%), Gaps = 28/254 (11%)
Query: 103 NSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
++VA+K L E F E + + ++RH+ LV+L +E +V EY++ G+L
Sbjct: 42 TTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVCEYMSKGSL 99
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
+L G++G L + M + A G++Y+ VHRD++++NIL+ ++ K
Sbjct: 100 LDFLKGEMGKYLRLPQLVDMAAQI--ASGMAYVERM---NYVHRDLRAANILVGENLVCK 154
Query: 223 VSDFGLAKLLGSESSYITTRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
V+DFGLA+L+ E + T R F + APE A G +SDV+SFGIL+ E+ + G
Sbjct: 155 VADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKG 212
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNA 339
R+P P VN + V ++ G P PE P S + + +C +
Sbjct: 213 RVPY-----PGMVN------REVLDQVERGYRMPCPPECPES-----LHDLMCQCWRKDP 256
Query: 340 QKRPKMGHVVHMLE 353
++RP ++ LE
Sbjct: 257 EERPTFEYLQAFLE 270
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 128/254 (50%), Gaps = 28/254 (11%)
Query: 103 NSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
++VA+K L E F E + + ++RH+ LV+L +E +V EY++ G+L
Sbjct: 31 TTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSL 88
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
+L G++G L + M + A G++Y+ VHRD++++NIL+ ++ K
Sbjct: 89 LDFLKGEMGKYLRLPQLVDMAAQI--ASGMAYVERM---NYVHRDLRAANILVGENLVCK 143
Query: 223 VSDFGLAKLLGSESSYITTRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
V+DFGLA+L+ E + T R F + APE A G +SDV+SFGIL+ E+ + G
Sbjct: 144 VADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKG 201
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNA 339
R+P P VN + V ++ G P PE P S + + +C +
Sbjct: 202 RVPY-----PGMVN------REVLDQVERGYRMPCPPECPES-----LHDLMCQCWRKDP 245
Query: 340 QKRPKMGHVVHMLE 353
++RP ++ LE
Sbjct: 246 EERPTFEYLQAFLE 259
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 128/254 (50%), Gaps = 28/254 (11%)
Query: 103 NSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
++VA+K L E F E + + ++RH+ LV+L +E +V EY++ G+L
Sbjct: 42 TTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSL 99
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
+L G++G L + M + A G++Y+ VHRD++++NIL+ ++ K
Sbjct: 100 LDFLKGEMGKYLRLPQLVDMAAQI--ASGMAYVERM---NYVHRDLRAANILVGENLVCK 154
Query: 223 VSDFGLAKLLGSESSYITTRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
V+DFGLA+L+ E + T R F + APE A G +SDV+SFGIL+ E+ + G
Sbjct: 155 VADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKG 212
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNA 339
R+P P VN + V ++ G P PE P S + + +C +
Sbjct: 213 RVPY-----PGMVN------REVLDQVERGYRMPCPPECPES-----LHDLMCQCWRKDP 256
Query: 340 QKRPKMGHVVHMLE 353
++RP ++ LE
Sbjct: 257 EERPTFEYLQAFLE 270
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 111/207 (53%), Gaps = 12/207 (5%)
Query: 103 NSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
++KVAVK+L + F E + +++H+ LVRL + ++ EY+ NG+L
Sbjct: 38 HTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSL 95
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
+L G LT +++ A+G++++ E +HRD++++NIL+ + K
Sbjct: 96 VDFLKTPSG--IKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCK 150
Query: 223 VSDFGLAKLLGSESSYITTRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
++DFGLA+L+ E + T R F + APE + G +SDV+SFGIL+ E+++ G
Sbjct: 151 IADFGLARLI--EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 208
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRN 306
RIP PE + +E +MV N
Sbjct: 209 RIPYPGMTNPEVIQNLERGYRMVRPDN 235
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 111/207 (53%), Gaps = 12/207 (5%)
Query: 103 NSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
++KVAVK+L + F E + +++H+ LVRL + ++ EY+ NG+L
Sbjct: 37 HTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSL 94
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
+L G LT +++ A+G++++ E +HRD++++NIL+ + K
Sbjct: 95 VDFLKTPSG--IKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCK 149
Query: 223 VSDFGLAKLLGSESSYITTRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
++DFGLA+L+ E + T R F + APE + G +SDV+SFGIL+ E+++ G
Sbjct: 150 IADFGLARLI--EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 207
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRN 306
RIP PE + +E +MV N
Sbjct: 208 RIPYPGMTNPEVIQNLERGYRMVRPDN 234
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 130/286 (45%), Gaps = 40/286 (13%)
Query: 106 VAVKNLLNNRGQAERE-FKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K + ++ER+ F VE+ + RV H N+V+L G C LV EY G+L
Sbjct: 35 VAIKQI---ESESERKAFIVELRQLSRVNHPNIVKLYGACLNPV--CLVMEYAEGGSLYN 89
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP-KV 223
LHG P T M+ L ++G++YLH ++HRD+K N+L+ K+
Sbjct: 90 VLHG-AEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKI 148
Query: 224 SDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPV 283
DFG A + + T G+ ++APE +E+ DV+S+GI++ EVI+ R P
Sbjct: 149 CDFGTACDIQTH----MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPF 204
Query: 284 DY---------------SRPPEEVNL---IEWLKKMVTNRNPEGVLDPKLPEKPTSRLLK 325
D +RPP NL IE L +++P ++P+ +
Sbjct: 205 DEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPS--------QRPSMEEIV 256
Query: 326 RILLVALRCVDPNAQKRPKMGHVVHMLEAQESPSKEPSNSFQDRYR 371
+I+ +R P A + P H L E EP F + YR
Sbjct: 257 KIMTHLMRYF-PGADE-PLQYPCQHSLPPGEDGRVEPYVDFAEFYR 300
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 111/207 (53%), Gaps = 12/207 (5%)
Query: 103 NSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
++KVAVK+L + F E + +++H+ LVRL + ++ EY+ NG+L
Sbjct: 37 HTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSL 94
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
+L G LT +++ A+G++++ E +HRD++++NIL+ + K
Sbjct: 95 VDFLKTPSG--IKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCK 149
Query: 223 VSDFGLAKLLGSESSYITTRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
++DFGLA+L+ E + T R F + APE + G +SDV+SFGIL+ E+++ G
Sbjct: 150 IADFGLARLI--EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 207
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRN 306
RIP PE + +E +MV N
Sbjct: 208 RIPYPGMTNPEVIQNLERGYRMVRPDN 234
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 126/254 (49%), Gaps = 28/254 (11%)
Query: 103 NSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
++VA+K L E F E + + ++RH+ LV+L +E +V EY++ G+L
Sbjct: 208 TTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSL 265
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
+L G+ G L + M + A G++Y+ VHRD++++NIL+ ++ K
Sbjct: 266 LDFLKGETGKYLRLPQLVDMAAQI--ASGMAYVERM---NYVHRDLRAANILVGENLVCK 320
Query: 223 VSDFGLAKLLGSESSYITTRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
V+DFGLA+L+ E + T R F + APE A G +SDV+SFGIL+ E+ + G
Sbjct: 321 VADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKG 378
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNA 339
R+P P VN + V ++ G P PE P S + + +C
Sbjct: 379 RVPY-----PGMVN------REVLDQVERGYRMPCPPECPES-----LHDLMCQCWRKEP 422
Query: 340 QKRPKMGHVVHMLE 353
++RP ++ LE
Sbjct: 423 EERPTFEYLQAFLE 436
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 126/254 (49%), Gaps = 28/254 (11%)
Query: 103 NSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
++VA+K L E F E + + ++RH+ LV+L +E +V EY++ G+L
Sbjct: 208 TTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSL 265
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
+L G+ G L + M + A G++Y+ VHRD++++NIL+ ++ K
Sbjct: 266 LDFLKGETGKYLRLPQLVDMAAQI--ASGMAYVERM---NYVHRDLRAANILVGENLVCK 320
Query: 223 VSDFGLAKLLGSESSYITTRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
V+DFGLA+L+ E + T R F + APE A G +SDV+SFGIL+ E+ + G
Sbjct: 321 VADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKG 378
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNA 339
R+P P VN + V ++ G P PE P S + + +C
Sbjct: 379 RVPY-----PGMVN------REVLDQVERGYRMPCPPECPES-----LHDLMCQCWRKEP 422
Query: 340 QKRPKMGHVVHMLE 353
++RP ++ LE
Sbjct: 423 EERPTFEYLQAFLE 436
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 126/254 (49%), Gaps = 28/254 (11%)
Query: 103 NSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
++VA+K L E F E + + ++RH+ LV+L +E +V EY++ G+L
Sbjct: 291 TTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSL 348
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
+L G+ G L + M + A G++Y+ VHRD++++NIL+ ++ K
Sbjct: 349 LDFLKGETGKYLRLPQLVDMAAQI--ASGMAYVERM---NYVHRDLRAANILVGENLVCK 403
Query: 223 VSDFGLAKLLGSESSYITTRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
V+DFGLA+L+ E + T R F + APE A G +SDV+SFGIL+ E+ + G
Sbjct: 404 VADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKG 461
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNA 339
R+P P VN + V ++ G P PE P S + + +C
Sbjct: 462 RVPY-----PGMVN------REVLDQVERGYRMPCPPECPES-----LHDLMCQCWRKEP 505
Query: 340 QKRPKMGHVVHMLE 353
++RP ++ LE
Sbjct: 506 EERPTFEYLQAFLE 519
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 122/254 (48%), Gaps = 28/254 (11%)
Query: 106 VAVKNLLNNRGQAER-EFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K L + + +R +F E +G+ H N++ L G + M++ E++ NG+L+
Sbjct: 64 VAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDS 123
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
+L + G + + + ++ G A G+ YL + VHRD+ + NIL++ + KVS
Sbjct: 124 FLRQNDGQFTVIQL---VGMLRGIAAGMKYLADM---NYVHRDLAARNILVNSNLVCKVS 177
Query: 225 DFGLAKLLGSESSYIT-TRVMG---TFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
DFGL++ L ++S T T +G + APE SDV+S+GI++ EV+S G
Sbjct: 178 DFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYG 237
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNA 339
P + +N IE D +LP P + + L C +
Sbjct: 238 ERPYWDMTNQDVINAIEQ--------------DYRLP--PPMDCPSALHQLMLDCWQKDR 281
Query: 340 QKRPKMGHVVHMLE 353
RPK G +V+ L+
Sbjct: 282 NHRPKFGQIVNTLD 295
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 119/251 (47%), Gaps = 24/251 (9%)
Query: 106 VAVKNL-LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K L + + R+F E +G+ H N++ L G + M+V EY+ NG+L+
Sbjct: 53 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDT 112
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
+L + G + + + ++ G + G+ YL + VHRD+ + NILI+ + KVS
Sbjct: 113 FLKKNDGQFTVIQL---VGMLRGISAGMKYLSDM---GYVHRDLAARNILINSNLVCKVS 166
Query: 225 DFGLAKLL--GSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIP 282
DFGL+++L E++Y T + APE + SDV+S+GI++ EV+S
Sbjct: 167 DFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVS---- 222
Query: 283 VDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNAQKR 342
Y P E + V EG P + P + + + L C R
Sbjct: 223 --YGERP----YWEMTNQDVIKAVEEGYRLPSPMDCPAA-----LYQLMLDCWQKERNSR 271
Query: 343 PKMGHVVHMLE 353
PK +V+ML+
Sbjct: 272 PKFDEIVNMLD 282
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 127/254 (50%), Gaps = 28/254 (11%)
Query: 103 NSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
++VA+K L E F E + + ++RH+ LV+L +E +V EY++ G L
Sbjct: 42 TTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVMEYMSKGCL 99
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
+L G++G L + M + A G++Y+ VHRD++++NIL+ ++ K
Sbjct: 100 LDFLKGEMGKYLRLPQLVDMAAQI--ASGMAYVERM---NYVHRDLRAANILVGENLVCK 154
Query: 223 VSDFGLAKLLGSESSYITTRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
V+DFGLA+L+ E + T R F + APE A G +SDV+SFGIL+ E+ + G
Sbjct: 155 VADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKG 212
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNA 339
R+P P VN + V ++ G P PE P S + + +C +
Sbjct: 213 RVPY-----PGMVN------REVLDQVERGYRMPCPPECPES-----LHDLMCQCWRKDP 256
Query: 340 QKRPKMGHVVHMLE 353
++RP ++ LE
Sbjct: 257 EERPTFEYLQAFLE 270
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 93/176 (52%), Gaps = 9/176 (5%)
Query: 106 VAVKNLLNNRGQAER-EFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K L + +R +F E +G+ H N++RL G G M+V EY+ NG+L+
Sbjct: 80 VAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDT 139
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
+L G + + + ++ G G+ YL + VHRD+ + N+L+D + KVS
Sbjct: 140 FLRTHDGQFTIMQL---VGMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVS 193
Query: 225 DFGLAKLLGSESSYITTRVMGT--FGYVAPEYASTGMLNERSDVYSFGILIMEVIS 278
DFGL+++L + T G + APE + + SDV+SFG+++ EV++
Sbjct: 194 DFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 126/254 (49%), Gaps = 28/254 (11%)
Query: 103 NSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
++VA+K L E F E + + ++RH+ LV+L +E +V EY++ G+L
Sbjct: 32 TTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSEEPI-XIVTEYMSKGSL 89
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
+L G+ G L + M + A G++Y+ VHRD++++NIL+ ++ K
Sbjct: 90 LDFLKGETGKYLRLPQLVDMAAQI--ASGMAYVERM---NYVHRDLRAANILVGENLVCK 144
Query: 223 VSDFGLAKLLGSESSYITTRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
V+DFGLA+L+ E + T R F + APE A G +SDV+SFGIL+ E+ + G
Sbjct: 145 VADFGLARLI--EDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKG 202
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNA 339
R+P P VN + V ++ G P PE P S + + +C
Sbjct: 203 RVPY-----PGMVN------REVLDQVERGYRMPCPPECPES-----LHDLMCQCWRKEP 246
Query: 340 QKRPKMGHVVHMLE 353
++RP ++ LE
Sbjct: 247 EERPTFEYLQAFLE 260
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 127/254 (50%), Gaps = 28/254 (11%)
Query: 103 NSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
++VA+K L E F E + + ++RH+ LV+L +E +V EY++ G L
Sbjct: 42 TTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGCL 99
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
+L G++G L + M + A G++Y+ VHRD++++NIL+ ++ K
Sbjct: 100 LDFLKGEMGKYLRLPQLVDMAAQI--ASGMAYVERM---NYVHRDLRAANILVGENLVCK 154
Query: 223 VSDFGLAKLLGSESSYITTRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
V+DFGLA+L+ E + T R F + APE A G +SDV+SFGIL+ E+ + G
Sbjct: 155 VADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKG 212
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNA 339
R+P P VN + V ++ G P PE P S + + +C +
Sbjct: 213 RVPY-----PGMVN------REVLDQVERGYRMPCPPECPES-----LHDLMCQCWRKDP 256
Query: 340 QKRPKMGHVVHMLE 353
++RP ++ LE
Sbjct: 257 EERPTFEYLQAFLE 270
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 127/254 (50%), Gaps = 28/254 (11%)
Query: 103 NSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
++VA+K L E F E + + ++RH+ LV+L +E +V EY++ G+L
Sbjct: 42 TTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSL 99
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
+L G++G L + M + A G++Y+ VHRD+ ++NIL+ ++ K
Sbjct: 100 LDFLKGEMGKYLRLPQLVDMAAQI--ASGMAYVERM---NYVHRDLAAANILVGENLVCK 154
Query: 223 VSDFGLAKLLGSESSYITTRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
V+DFGLA+L+ E + T R F + APE A G +SDV+SFGIL+ E+ + G
Sbjct: 155 VADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKG 212
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNA 339
R+P P VN + V ++ G P PE P S + + +C +
Sbjct: 213 RVPY-----PGMVN------REVLDQVERGYRMPCPPECPES-----LHDLMCQCWRKDP 256
Query: 340 QKRPKMGHVVHMLE 353
++RP ++ LE
Sbjct: 257 EERPTFEYLQAFLE 270
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 126/254 (49%), Gaps = 28/254 (11%)
Query: 103 NSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
++VA+K L E F E + + ++RH+ LV+L +E +V EY++ G+L
Sbjct: 35 TTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSL 92
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
+L G+ G L + M + A G++Y+ VHRD++++NIL+ ++ K
Sbjct: 93 LDFLKGETGKYLRLPQLVDMAAQI--ASGMAYVERM---NYVHRDLRAANILVGENLVCK 147
Query: 223 VSDFGLAKLLGSESSYITTRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
V+DFGLA+L+ E + T R F + APE A G +SDV+SFGIL+ E+ + G
Sbjct: 148 VADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKG 205
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNA 339
R+P P VN + V ++ G P PE P S + + +C
Sbjct: 206 RVPY-----PGMVN------REVLDQVERGYRMPCPPECPES-----LHDLMCQCWRKEP 249
Query: 340 QKRPKMGHVVHMLE 353
++RP ++ LE
Sbjct: 250 EERPTFEYLQAFLE 263
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 126/254 (49%), Gaps = 28/254 (11%)
Query: 103 NSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
++VA+K L E F E + + ++RH+ LV+L +E +V EY++ G+L
Sbjct: 208 TTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVGEYMSKGSL 265
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
+L G+ G L + M + A G++Y+ VHRD++++NIL+ ++ K
Sbjct: 266 LDFLKGETGKYLRLPQLVDMAAQI--ASGMAYVER---MNYVHRDLRAANILVGENLVCK 320
Query: 223 VSDFGLAKLLGSESSYITTRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
V+DFGLA+L+ E + T R F + APE A G +SDV+SFGIL+ E+ + G
Sbjct: 321 VADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKG 378
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNA 339
R+P P VN + V ++ G P PE P S + + +C
Sbjct: 379 RVPY-----PGMVN------REVLDQVERGYRMPCPPECPES-----LHDLMCQCWRKEP 422
Query: 340 QKRPKMGHVVHMLE 353
++RP ++ LE
Sbjct: 423 EERPTFEYLQAFLE 436
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 127/254 (50%), Gaps = 28/254 (11%)
Query: 103 NSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
++VA+K L E F E + + ++RH+ LV+L +E +V EY++ G+L
Sbjct: 209 TTRVAIKTLKPGNMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSL 266
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
+L G++G L + M + A G++Y+ VHRD++++NIL+ ++ K
Sbjct: 267 LDFLKGEMGKYLRLPQLVDMAAQI--ASGMAYVER---MNYVHRDLRAANILVGENLVCK 321
Query: 223 VSDFGLAKLLGSESSYITTRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
V+DFGL +L+ E + T R F + APE A G +SDV+SFGIL+ E+ + G
Sbjct: 322 VADFGLGRLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKG 379
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNA 339
R+P P VN + V ++ G P PE P S + + +C +
Sbjct: 380 RVPY-----PGMVN------REVLDQVERGYRMPCPPECPES-----LHDLMCQCWRKDP 423
Query: 340 QKRPKMGHVVHMLE 353
++RP ++ LE
Sbjct: 424 EERPTFEYLQAFLE 437
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 94/176 (53%), Gaps = 20/176 (11%)
Query: 117 QAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPL 176
Q + E + ++H N++ L G C + + LV E+ G L + L G P
Sbjct: 48 QTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPP--- 104
Query: 177 TWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP--------KVSDFGL 228
+I +N + A+G++YLH+ ++HRD+KSSNILI + K++DFGL
Sbjct: 105 --DILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGL 162
Query: 229 AKLLGSESSYITTRV--MGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIP 282
A+ + TT++ G + ++APE M ++ SDV+S+G+L+ E+++G +P
Sbjct: 163 AR-----EWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 122/251 (48%), Gaps = 24/251 (9%)
Query: 106 VAVKNL-LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K L + + R+F E +G+ H N++RL G + M+V EY+ NG+L+
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
+L + + + ++ G A G+ YL + VHRD+ + NILI+ + KVS
Sbjct: 136 FLRKHDAQFTVIQL---VGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVS 189
Query: 225 DFGLAKLL--GSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIP 282
DFGLA++L E++Y T + +PE + SDV+S+GI++ EV+S
Sbjct: 190 DFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG-- 247
Query: 283 VDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNAQKR 342
RP E++ + +K + EG P + P + + + L C + R
Sbjct: 248 ---ERPYWEMSNQDVIKAV-----DEGYRLPPPMDCPAA-----LYQLMLDCWQKDRNNR 294
Query: 343 PKMGHVVHMLE 353
PK +V +L+
Sbjct: 295 PKFEQIVSILD 305
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 111/207 (53%), Gaps = 12/207 (5%)
Query: 103 NSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
++KVAVK+L + F E + +++H+ LVRL + ++ EY+ NG+L
Sbjct: 33 HTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSL 90
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
+L G LT +++ A+G++++ E +HR+++++NIL+ + K
Sbjct: 91 VDFLKTPSG--IKLTINKLLDMAAQIAEGMAFIEER---NYIHRNLRAANILVSDTLSCK 145
Query: 223 VSDFGLAKLLGSESSYITTRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
++DFGLA+L+ E + T R F + APE + G +SDV+SFGIL+ E+++ G
Sbjct: 146 IADFGLARLI--EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 203
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRN 306
RIP PE + +E +MV N
Sbjct: 204 RIPYPGMTNPEVIQNLERGYRMVRPDN 230
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 121/252 (48%), Gaps = 26/252 (10%)
Query: 106 VAVKNL-LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K L + R+F E +G+ H N++ L G + M++ EY+ NG+L+
Sbjct: 60 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 119
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
+L + G + + + ++ G G+ YL + VHRD+ + NIL++ + KVS
Sbjct: 120 FLRKNDGRFTVIQL---VGMLRGIGSGMKYLS---DMSAVHRDLAARNILVNSNLVCKVS 173
Query: 225 DFGLAKLL--GSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRI 281
DFG++++L E++Y T + APE + SDV+S+GI++ EV+S G
Sbjct: 174 DFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGER 233
Query: 282 PVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNAQK 341
P + + IE EG P + P + L +++ L C
Sbjct: 234 PYWDMSNQDVIKAIE-----------EGYRLPPPMDCPIA--LHQLM---LDCWQKERSD 277
Query: 342 RPKMGHVVHMLE 353
RPK G +V+ML+
Sbjct: 278 RPKFGQIVNMLD 289
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 127/256 (49%), Gaps = 28/256 (10%)
Query: 106 VAVK--NLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLE 163
VAVK N+ Q + FK EV + + RH N++ +GY + +V ++ +L
Sbjct: 37 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLY 95
Query: 164 QWLHGDVGPCSPLTWEIR--MNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
LH S +E++ ++I TA+G+ YLH ++HRD+KS+NI + +
Sbjct: 96 HHLH-----ASETKFEMKKLIDIARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTV 147
Query: 222 KVSDFGLAKLLGSES-SYITTRVMGTFGYVAPE---YASTGMLNERSDVYSFGILIMEVI 277
K+ DFGLA + S S+ ++ G+ ++APE + + +SDVY+FGI++ E++
Sbjct: 148 KIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELM 207
Query: 278 SGRIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDP 337
+G++P YS +IE + + G L P L K S KR+ + C+
Sbjct: 208 TGQLP--YSNINNRDQIIEMVGR--------GSLSPDL-SKVRSNCPKRMKRLMAECLKK 256
Query: 338 NAQKRPKMGHVVHMLE 353
+RP ++ +E
Sbjct: 257 KRDERPSFPRILAEIE 272
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 105/202 (51%), Gaps = 15/202 (7%)
Query: 106 VAVKNLLNNRGQAE-REFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K L +A+ E E + + ++ + +VRL+G C A MLV E G L +
Sbjct: 40 VAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEA-LMLVMEMAGGGPLHK 98
Query: 165 WLHG--DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
+L G + P S + ++ + G+ YL E VHRD+ + N+L+ K
Sbjct: 99 FLVGKREEIPVSNVA-----ELLHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAK 150
Query: 223 VSDFGLAKLLGSESSYITTRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
+SDFGL+K LG++ SY T R G + + APE + + RSDV+S+G+ + E +S G
Sbjct: 151 ISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYG 210
Query: 280 RIPVDYSRPPEEVNLIEWLKKM 301
+ P + PE + IE K+M
Sbjct: 211 QKPYKKMKGPEVMAFIEQGKRM 232
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 122/251 (48%), Gaps = 24/251 (9%)
Query: 106 VAVKNL-LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K L + + R+F E +G+ H N++RL G + M+V EY+ NG+L+
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
+L + + + ++ G A G+ YL + VHRD+ + NILI+ + KVS
Sbjct: 136 FLRKHDAQFTVIQL---VGMLRGIASGMKYLS---DMGFVHRDLAARNILINSNLVCKVS 189
Query: 225 DFGLAKLL--GSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIP 282
DFGL+++L E++Y T + +PE + SDV+S+GI++ EV+S
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG-- 247
Query: 283 VDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNAQKR 342
RP E++ + +K + EG P + P + + + L C + R
Sbjct: 248 ---ERPYWEMSNQDVIKAV-----DEGYRLPPPMDCPAA-----LYQLMLDCWQKDRNNR 294
Query: 343 PKMGHVVHMLE 353
PK +V +L+
Sbjct: 295 PKFEQIVSILD 305
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 121/252 (48%), Gaps = 26/252 (10%)
Query: 106 VAVKNL-LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K L + R+F E +G+ H N++ L G + M++ EY+ NG+L+
Sbjct: 39 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 98
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
+L + G + + + ++ G G+ YL + VHRD+ + NIL++ + KVS
Sbjct: 99 FLRKNDGRFTVIQL---VGMLRGIGSGMKYLS---DMSYVHRDLAARNILVNSNLVCKVS 152
Query: 225 DFGLAKLL--GSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRI 281
DFG++++L E++Y T + APE + SDV+S+GI++ EV+S G
Sbjct: 153 DFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGER 212
Query: 282 PVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNAQK 341
P + + IE EG P + P + L +++ L C
Sbjct: 213 PYWDMSNQDVIKAIE-----------EGYRLPPPMDCPIA--LHQLM---LDCWQKERSD 256
Query: 342 RPKMGHVVHMLE 353
RPK G +V+ML+
Sbjct: 257 RPKFGQIVNMLD 268
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 121/252 (48%), Gaps = 26/252 (10%)
Query: 106 VAVKNL-LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K L + R+F E +G+ H N++ L G + M++ EY+ NG+L+
Sbjct: 45 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 104
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
+L + G + + + ++ G G+ YL + VHRD+ + NIL++ + KVS
Sbjct: 105 FLRKNDGRFTVIQL---VGMLRGIGSGMKYLS---DMSYVHRDLAARNILVNSNLVCKVS 158
Query: 225 DFGLAKLL--GSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRI 281
DFG++++L E++Y T + APE + SDV+S+GI++ EV+S G
Sbjct: 159 DFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGER 218
Query: 282 PVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNAQK 341
P + + IE EG P + P + L +++ L C
Sbjct: 219 PYWDMSNQDVIKAIE-----------EGYRLPPPMDCPIA--LHQLM---LDCWQKERSD 262
Query: 342 RPKMGHVVHMLE 353
RPK G +V+ML+
Sbjct: 263 RPKFGQIVNMLD 274
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 122/251 (48%), Gaps = 24/251 (9%)
Query: 106 VAVKNL-LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K L + + R+F E +G+ H N++RL G + M+V EY+ NG+L+
Sbjct: 74 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 133
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
+L + + + ++ G A G+ YL + VHRD+ + NILI+ + KVS
Sbjct: 134 FLRKHDAQFTVIQL---VGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVS 187
Query: 225 DFGLAKLL--GSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIP 282
DFGL+++L E++Y T + +PE + SDV+S+GI++ EV+S
Sbjct: 188 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG-- 245
Query: 283 VDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNAQKR 342
RP E++ + +K + EG P + P + + + L C + R
Sbjct: 246 ---ERPYWEMSNQDVIKAV-----DEGYRLPPPMDCPAA-----LYQLMLDCWQKDRNNR 292
Query: 343 PKMGHVVHMLE 353
PK +V +L+
Sbjct: 293 PKFEQIVSILD 303
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 122/251 (48%), Gaps = 24/251 (9%)
Query: 106 VAVKNL-LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K L + + R+F E +G+ H N++RL G + M+V EY+ NG+L+
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
+L + + + ++ G A G+ YL + VHRD+ + NILI+ + KVS
Sbjct: 136 FLRKHDAQFTVIQL---VGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVS 189
Query: 225 DFGLAKLL--GSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIP 282
DFGL+++L E++Y T + +PE + SDV+S+GI++ EV+S
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG-- 247
Query: 283 VDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNAQKR 342
RP E++ + +K + EG P + P + + + L C + R
Sbjct: 248 ---ERPYWEMSNQDVIKAV-----DEGYRLPPPMDCPAA-----LYQLMLDCWQKDRNNR 294
Query: 343 PKMGHVVHMLE 353
PK +V +L+
Sbjct: 295 PKFEQIVSILD 305
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 122/251 (48%), Gaps = 24/251 (9%)
Query: 106 VAVKNL-LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K L + + R+F E +G+ H N++RL G + M+V EY+ NG+L+
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
+L + + + ++ G A G+ YL + VHRD+ + NILI+ + KVS
Sbjct: 136 FLRKHDAQFTVIQL---VGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVS 189
Query: 225 DFGLAKLL--GSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIP 282
DFGL+++L E++Y T + +PE + SDV+S+GI++ EV+S
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG-- 247
Query: 283 VDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNAQKR 342
RP E++ + +K + EG P + P + + + L C + R
Sbjct: 248 ---ERPYWEMSNQDVIKAV-----DEGYRLPPPMDCPAA-----LYQLMLDCWQKDRNNR 294
Query: 343 PKMGHVVHMLE 353
PK +V +L+
Sbjct: 295 PKFEQIVSILD 305
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 122/251 (48%), Gaps = 24/251 (9%)
Query: 106 VAVKNL-LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K L + + R+F E +G+ H N++RL G + M+V EY+ NG+L+
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
+L + + + ++ G A G+ YL + VHRD+ + NILI+ + KVS
Sbjct: 136 FLRKHDAQFTVIQL---VGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVS 189
Query: 225 DFGLAKLL--GSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIP 282
DFGL+++L E++Y T + +PE + SDV+S+GI++ EV+S
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG-- 247
Query: 283 VDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNAQKR 342
RP E++ + +K + EG P + P + + + L C + R
Sbjct: 248 ---ERPYWEMSNQDVIKAV-----DEGYRLPPPMDCPAA-----LYQLMLDCWQKDRNNR 294
Query: 343 PKMGHVVHMLE 353
PK +V +L+
Sbjct: 295 PKFEQIVSILD 305
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 122/251 (48%), Gaps = 24/251 (9%)
Query: 106 VAVKNL-LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K L + + R+F E +G+ H N++RL G + M+V EY+ NG+L+
Sbjct: 47 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 106
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
+L + + + ++ G A G+ YL + VHRD+ + NILI+ + KVS
Sbjct: 107 FLRKHDAQFTVIQ---LVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVS 160
Query: 225 DFGLAKLL--GSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIP 282
DFGL+++L E++Y T + +PE + SDV+S+GI++ EV+S
Sbjct: 161 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG-- 218
Query: 283 VDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNAQKR 342
RP E++ + +K + EG P + P + + + L C + R
Sbjct: 219 ---ERPYWEMSNQDVIKAV-----DEGYRLPPPMDCPAA-----LYQLMLDCWQKDRNNR 265
Query: 343 PKMGHVVHMLE 353
PK +V +L+
Sbjct: 266 PKFEQIVSILD 276
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 122/251 (48%), Gaps = 24/251 (9%)
Query: 106 VAVKNL-LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K L + + R+F E +G+ H N++RL G + M+V EY+ NG+L+
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
+L + + + ++ G A G+ YL + VHRD+ + NILI+ + KVS
Sbjct: 136 FLRKHDAQFTVIQL---VGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVS 189
Query: 225 DFGLAKLL--GSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIP 282
DFGL+++L E++Y T + +PE + SDV+S+GI++ EV+S
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG-- 247
Query: 283 VDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNAQKR 342
RP E++ + +K + EG P + P + + + L C + R
Sbjct: 248 ---ERPYWEMSNQDVIKAV-----DEGYRLPPPMDCPAA-----LYQLMLDCWQKDRNNR 294
Query: 343 PKMGHVVHMLE 353
PK +V +L+
Sbjct: 295 PKFEQIVSILD 305
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 124/254 (48%), Gaps = 28/254 (11%)
Query: 103 NSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
++KVAVK + E F E + ++H LV+L + ++ E++ G+L
Sbjct: 212 HTKVAVKTMKPGSMSVE-AFLAEANVMKTLQHDKLVKLHAVVTKEPI-YIITEFMAKGSL 269
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
+L D G PL I + + A+G++++ + +HRD++++NIL+ K
Sbjct: 270 LDFLKSDEGSKQPLPKLIDFSAQI--AEGMAFIEQR---NYIHRDLRAANILVSASLVCK 324
Query: 223 VSDFGLAKLLGSESSYITTRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
++DFGLA+++ E + T R F + APE + G +SDV+SFGIL+ME+++ G
Sbjct: 325 IADFGLARVI--EDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYG 382
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNA 339
RIP PE + +E +M N PE+ + + +RC
Sbjct: 383 RIPYPGMSNPEVIRALERGYRMPRPEN--------CPEE--------LYNIMMRCWKNRP 426
Query: 340 QKRPKMGHVVHMLE 353
++RP ++ +L+
Sbjct: 427 EERPTFEYIQSVLD 440
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 121/251 (48%), Gaps = 24/251 (9%)
Query: 106 VAVKNL-LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K L + + R+F E +G+ H N++RL G + M+V EY+ NG+L+
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
+L + + + ++ G A G+ YL + VHRD+ + NILI+ + KVS
Sbjct: 136 FLRKHDAQFTVIQL---VGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVS 189
Query: 225 DFGLAKLL--GSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIP 282
DFGL ++L E++Y T + +PE + SDV+S+GI++ EV+S
Sbjct: 190 DFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG-- 247
Query: 283 VDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNAQKR 342
RP E++ + +K + EG P + P + + + L C + R
Sbjct: 248 ---ERPYWEMSNQDVIKAV-----DEGYRLPPPMDCPAA-----LYQLMLDCWQKDRNNR 294
Query: 343 PKMGHVVHMLE 353
PK +V +L+
Sbjct: 295 PKFEQIVSILD 305
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 123/252 (48%), Gaps = 26/252 (10%)
Query: 106 VAVKNL-LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K L + + R+F E +G+ H N++RL G + M+V EY+ NG+L+
Sbjct: 64 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 123
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
+L + + + ++ G A G+ YL + VHRD+ + NILI+ + KVS
Sbjct: 124 FLRKHDAQFTVIQ---LVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVS 177
Query: 225 DFGLAKLL--GSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIP 282
DFGL+++L E++Y T + +PE + SDV+S+GI++ EV+S
Sbjct: 178 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS---- 233
Query: 283 VDYS-RPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNAQK 341
Y RP E++ + +K + EG P + P + + + L C +
Sbjct: 234 --YGERPYWEMSNQDVIKAV-----DEGYRLPPPMDCPAA-----LYQLMLDCWQKDRNN 281
Query: 342 RPKMGHVVHMLE 353
RPK +V +L+
Sbjct: 282 RPKFEQIVSILD 293
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 103/200 (51%), Gaps = 11/200 (5%)
Query: 106 VAVKNLLNNRGQAE-REFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K L +A+ E E + + ++ + +VRL+G C A MLV E G L +
Sbjct: 366 VAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEA-LMLVMEMAGGGPLHK 424
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
+L VG + ++ + G+ YL E VHR++ + N+L+ K+S
Sbjct: 425 FL---VGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKIS 478
Query: 225 DFGLAKLLGSESSYITTRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRI 281
DFGL+K LG++ SY T R G + + APE + + RSDV+S+G+ + E +S G+
Sbjct: 479 DFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQK 538
Query: 282 PVDYSRPPEEVNLIEWLKKM 301
P + PE + IE K+M
Sbjct: 539 PYKKMKGPEVMAFIEQGKRM 558
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 121/254 (47%), Gaps = 28/254 (11%)
Query: 106 VAVKNLLNNRGQAER-EFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K L + + +R +F E +G+ H N++ L G + M++ E++ NG+L+
Sbjct: 38 VAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDS 97
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
+L + G + + + ++ G A G+ YL + VHR + + NIL++ + KVS
Sbjct: 98 FLRQNDGQFTVIQL---VGMLRGIAAGMKYLA---DMNYVHRALAARNILVNSNLVCKVS 151
Query: 225 DFGLAKLLGSESSYIT-TRVMG---TFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
DFGL++ L ++S T T +G + APE SDV+S+GI++ EV+S G
Sbjct: 152 DFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYG 211
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNA 339
P + +N IE D +LP P + + L C +
Sbjct: 212 ERPYWDMTNQDVINAIE--------------QDYRLP--PPMDCPSALHQLMLDCWQKDR 255
Query: 340 QKRPKMGHVVHMLE 353
RPK G +V+ L+
Sbjct: 256 NHRPKFGQIVNTLD 269
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 125/258 (48%), Gaps = 30/258 (11%)
Query: 103 NSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
++KVAVK + E F E + ++H LV+L + ++ E++ G+L
Sbjct: 39 HTKVAVKTMKPGSMSVE-AFLAEANVMKTLQHDKLVKLHAVVTKEPI-YIITEFMAKGSL 96
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
+L D G PL I + + A+G++++ + +HRD++++NIL+ K
Sbjct: 97 LDFLKSDEGSKQPLPKLIDFSAQI--AEGMAFIEQR---NYIHRDLRAANILVSASLVCK 151
Query: 223 VSDFGLAKLLGSESSYITTRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
++DFGLA+++ E + T R F + APE + G +SDV+SFGIL+ME+++ G
Sbjct: 152 IADFGLARVI--EDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYG 209
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRN-PEGVLDPKLPEKPTSRLLKRILLVALRCVDPN 338
RIP PE + +E +M N PE + + + +RC
Sbjct: 210 RIPYPGMSNPEVIRALERGYRMPRPENCPEELYN-----------------IMMRCWKNR 252
Query: 339 AQKRPKMGHVVHMLEAQE 356
++RP ++ +L+ E
Sbjct: 253 PEERPTFEYIQSVLDDFE 270
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 129/285 (45%), Gaps = 39/285 (13%)
Query: 106 VAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQW 165
VAVK L + + E EF E + ++H NLV+LLG C ++ E++ GNL +
Sbjct: 39 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 97
Query: 166 LHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPK-VVHRDIKSSNILIDKHWNPKVS 224
L C+ E+ ++L A +S E LE K +HRD+ + N L+ ++ KV+
Sbjct: 98 LR----ECNRQ--EVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA 151
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRIPV 283
DFGL++L+ ++ + APE + + +SDV++FG+L+ E+ + G P
Sbjct: 152 DFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 211
Query: 284 DYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNAQKRP 343
P + L+E +M PEG PEK + + C N RP
Sbjct: 212 PGIDPSQVYELLEKDYRM---ERPEGC-----PEK--------VYELMRACWQWNPSDRP 255
Query: 344 KMGHVVHMLEAQESPSKEPSNSFQDRYRASPKNELIEKQVTESGD 388
+ +F+ ++ S ++ +EK++ + G+
Sbjct: 256 SFAEI--------------HQAFETMFQESSISDEVEKELGKRGE 286
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 105/228 (46%), Gaps = 14/228 (6%)
Query: 105 KVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
KV K L G E + + EVE +RH N++RL GY + L+ EY G +
Sbjct: 44 KVLFKAQLEKAG-VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEV-- 100
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
+ ++ S + I A LSY H +V+HRDIK N+L+ K++
Sbjct: 101 --YKELQKLSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIA 155
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVD 284
DFG + + + SS TT + GT Y+ PE M +E+ D++S G+L E + G+ P +
Sbjct: 156 DFGWS--VHAPSSRRTT-LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
Query: 285 ---YSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILL 329
Y + ++ +E+ ++ L P+ R + R +L
Sbjct: 213 ANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 260
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 126/256 (49%), Gaps = 28/256 (10%)
Query: 106 VAVK--NLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLE 163
VAVK N+ Q + FK EV + + RH N++ +GY + +V ++ +L
Sbjct: 49 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-STAPQLAIVTQWCEGSSLY 107
Query: 164 QWLHGDVGPCSPLTWEIR--MNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
LH S +E++ ++I TA+G+ YLH ++HRD+KS+NI + +
Sbjct: 108 HHLH-----ASETKFEMKKLIDIARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTV 159
Query: 222 KVSDFGLAKLLGSES-SYITTRVMGTFGYVAPE---YASTGMLNERSDVYSFGILIMEVI 277
K+ DFGLA S S+ ++ G+ ++APE + + +SDVY+FGI++ E++
Sbjct: 160 KIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELM 219
Query: 278 SGRIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDP 337
+G++P YS +IE + + G L P L K S KR+ + C+
Sbjct: 220 TGQLP--YSNINNRDQIIEMVGR--------GSLSPDL-SKVRSNCPKRMKRLMAECLKK 268
Query: 338 NAQKRPKMGHVVHMLE 353
+RP ++ +E
Sbjct: 269 KRDERPSFPRILAEIE 284
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 126/256 (49%), Gaps = 28/256 (10%)
Query: 106 VAVK--NLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLE 163
VAVK N+ Q + FK EV + + RH N++ +GY + +V ++ +L
Sbjct: 49 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLY 107
Query: 164 QWLHGDVGPCSPLTWEIR--MNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
LH S +E++ ++I TA+G+ YLH ++HRD+KS+NI + +
Sbjct: 108 HHLH-----ASETKFEMKKLIDIARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTV 159
Query: 222 KVSDFGLAKLLGSES-SYITTRVMGTFGYVAPE---YASTGMLNERSDVYSFGILIMEVI 277
K+ DFGLA S S+ ++ G+ ++APE + + +SDVY+FGI++ E++
Sbjct: 160 KIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELM 219
Query: 278 SGRIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDP 337
+G++P YS +IE + + G L P L K S KR+ + C+
Sbjct: 220 TGQLP--YSNINNRDQIIEMVGR--------GSLSPDL-SKVRSNCPKRMKRLMAECLKK 268
Query: 338 NAQKRPKMGHVVHMLE 353
+RP ++ +E
Sbjct: 269 KRDERPSFPRILAEIE 284
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 92/176 (52%), Gaps = 9/176 (5%)
Query: 106 VAVKNL-LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K L + + R+F E +G+ H N+V L G G M+V E++ NG L+
Sbjct: 74 VAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDA 133
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
+L G + + + ++ G A G+ YL + VHRD+ + NIL++ + KVS
Sbjct: 134 FLRKHDGQFTVIQL---VGMLRGIAAGMRYLA---DMGYVHRDLAARNILVNSNLVCKVS 187
Query: 225 DFGLAKLL--GSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS 278
DFGL++++ E+ Y TT + APE SDV+S+GI++ EV+S
Sbjct: 188 DFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 243
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 129/285 (45%), Gaps = 39/285 (13%)
Query: 106 VAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQW 165
VAVK L + + E EF E + ++H NLV+LLG C ++ E++ GNL +
Sbjct: 39 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 97
Query: 166 LHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPK-VVHRDIKSSNILIDKHWNPKVS 224
L C+ E+ ++L A +S E LE K +HRD+ + N L+ ++ KV+
Sbjct: 98 LR----ECNRQ--EVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA 151
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRIPV 283
DFGL++L+ ++ + APE + + +SDV++FG+L+ E+ + G P
Sbjct: 152 DFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 211
Query: 284 DYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNAQKRP 343
P + L+E +M PEG PEK + + C N RP
Sbjct: 212 PGIDPSQVYELLEKDYRM---ERPEGC-----PEK--------VYELMRACWQWNPSDRP 255
Query: 344 KMGHVVHMLEAQESPSKEPSNSFQDRYRASPKNELIEKQVTESGD 388
+ +F+ ++ S ++ +EK++ + G+
Sbjct: 256 SFAEI--------------HQAFETMFQESSISDEVEKELGKRGE 286
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 117/256 (45%), Gaps = 27/256 (10%)
Query: 106 VAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQW 165
VAVK L + + E EF E + ++H NLV+LLG C ++ E++ GNL +
Sbjct: 39 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDY 97
Query: 166 LHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPK-VVHRDIKSSNILIDKHWNPKVS 224
L C+ E+ ++L A +S E LE K +HRD+ + N L+ ++ KV+
Sbjct: 98 LR----ECNRQ--EVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA 151
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRIPV 283
DFGL++L+ ++ + APE + + +SDV++FG+L+ E+ + G P
Sbjct: 152 DFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 211
Query: 284 DYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNAQKRP 343
P + L+E +M PEG PEK + + C N RP
Sbjct: 212 PGIDPSQVYELLEKDYRM---ERPEGC-----PEK--------VYELMRACWQWNPSDRP 255
Query: 344 KMGHVVHMLEA--QES 357
+ E QES
Sbjct: 256 SFAEIHQAFETMFQES 271
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 105/228 (46%), Gaps = 14/228 (6%)
Query: 105 KVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
KV K L G E + + EVE +RH N++RL GY + L+ EY G +
Sbjct: 65 KVLFKAQLEKAG-VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV-- 121
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
+ ++ S + I A LSY H +V+HRDIK N+L+ K++
Sbjct: 122 --YRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIA 176
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVD 284
DFG + + + SS TT + GT Y+ PE M +E+ D++S G+L E + G+ P +
Sbjct: 177 DFGWS--VHAPSSRRTT-LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 233
Query: 285 ---YSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILL 329
Y + ++ +E+ ++ L P+ R + R +L
Sbjct: 234 ANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 281
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 105/228 (46%), Gaps = 14/228 (6%)
Query: 105 KVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
KV K L G E + + EVE +RH N++RL GY + L+ EY G +
Sbjct: 56 KVLFKAQLEKAG-VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV-- 112
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
+ ++ S + I A LSY H +V+HRDIK N+L+ K++
Sbjct: 113 --YRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIA 167
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVD 284
DFG + + + SS TT + GT Y+ PE M +E+ D++S G+L E + G+ P +
Sbjct: 168 DFGWS--VHAPSSRRTT-LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 224
Query: 285 ---YSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILL 329
Y + ++ +E+ ++ L P+ R + R +L
Sbjct: 225 ANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 272
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 97/183 (53%), Gaps = 12/183 (6%)
Query: 103 NSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
N+KVA+K L E F E + + +++H LV+L +E +V EY+N G+L
Sbjct: 33 NTKVAIKTLKPGTMSPE-SFLEEAQIMKKLKHDKLVQLYAVVSE-EPIYIVTEYMNKGSL 90
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
+L G L + M A G++Y+ +HRD++S+NIL+ K
Sbjct: 91 LDFLKDGEGRALKLPNLVDMAA--QVAAGMAYIERM---NYIHRDLRSANILVGNGLICK 145
Query: 223 VSDFGLAKLLGSESSYITTRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
++DFGLA+L+ E + T R F + APE A G +SDV+SFGIL+ E+++ G
Sbjct: 146 IADFGLARLI--EDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKG 203
Query: 280 RIP 282
R+P
Sbjct: 204 RVP 206
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 122/272 (44%), Gaps = 30/272 (11%)
Query: 105 KVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
KV K L G E + + EVE +RH N++RL GY + L+ EY G +
Sbjct: 40 KVLFKAQLEKAG-VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV-- 96
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
+ ++ S + I A LSY H +V+HRDIK N+L+ K++
Sbjct: 97 --YRELQKLSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIA 151
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVD 284
DFG + + SS TT + GT Y+ PE M +E+ D++S G+L E + G+ P +
Sbjct: 152 DFGWS--CHAPSSRRTT-LSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
Query: 285 YSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNAQKRPK 344
+ E I ++ + EG D SRLLK N +RP
Sbjct: 209 ANTYQETYKRISRVEFTFPDFVTEGARD------LISRLLKH-----------NPSQRPM 251
Query: 345 MGHVVHMLEAQESPSKEPSNSFQDRYRASPKN 376
+ V+ + SK PSNS Q++ AS ++
Sbjct: 252 LREVLEHPWITANSSK-PSNS-QNKESASKQS 281
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 105/228 (46%), Gaps = 14/228 (6%)
Query: 105 KVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
KV K L G E + + EVE +RH N++RL GY + L+ EY G +
Sbjct: 42 KVLFKAQLEKAG-VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV-- 98
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
+ ++ S + I A LSY H +V+HRDIK N+L+ K++
Sbjct: 99 --YRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIA 153
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVD 284
DFG + + + SS TT + GT Y+ PE M +E+ D++S G+L E + G+ P +
Sbjct: 154 DFGWS--VHAPSSRRTT-LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
Query: 285 ---YSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILL 329
Y + ++ +E+ ++ L P+ R + R +L
Sbjct: 211 ANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 105/228 (46%), Gaps = 14/228 (6%)
Query: 105 KVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
KV K L G E + + EVE +RH N++RL GY + L+ EY G +
Sbjct: 44 KVLFKAQLEKAG-VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV-- 100
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
+ ++ S + I A LSY H +V+HRDIK N+L+ K++
Sbjct: 101 --YRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIA 155
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVD 284
DFG + + + SS TT + GT Y+ PE M +E+ D++S G+L E + G+ P +
Sbjct: 156 DFGWS--VHAPSSRRTT-LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
Query: 285 ---YSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILL 329
Y + ++ +E+ ++ L P+ R + R +L
Sbjct: 213 ANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 260
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 105/228 (46%), Gaps = 14/228 (6%)
Query: 105 KVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
KV K L G E + + EVE +RH N++RL GY + L+ EY G +
Sbjct: 39 KVLFKAQLEKAG-VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV-- 95
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
+ ++ S + I A LSY H +V+HRDIK N+L+ K++
Sbjct: 96 --YRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIA 150
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVD 284
DFG + + + SS TT + GT Y+ PE M +E+ D++S G+L E + G+ P +
Sbjct: 151 DFGWS--VHAPSSRRTT-LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
Query: 285 ---YSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILL 329
Y + ++ +E+ ++ L P+ R + R +L
Sbjct: 208 ANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 119/259 (45%), Gaps = 33/259 (12%)
Query: 106 VAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQW 165
VAVK L + + E EF E + ++H NLV+LLG C ++ E++ GNL +
Sbjct: 42 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDY 100
Query: 166 LHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPK-VVHRDIKSSNILIDKHWNPKVS 224
L C+ E+ ++L A +S E LE K +HRD+ + N L+ ++ KV+
Sbjct: 101 LR----ECN--RQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA 154
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRIP- 282
DFGL++L+ ++ + APE + + +SDV++FG+L+ E+ + G P
Sbjct: 155 DFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 214
Query: 283 --VDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNAQ 340
+D S+ + E L+K PEG PEK + + C N
Sbjct: 215 PGIDLSQ------VYELLEKDYRMERPEGC-----PEK--------VYELMRACWQWNPS 255
Query: 341 KRPKMGHVVHMLEA--QES 357
RP + E QES
Sbjct: 256 DRPSFAEIHQAFETMFQES 274
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 130/287 (45%), Gaps = 45/287 (15%)
Query: 106 VAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQW 165
VAVK L + + E EF E + ++H NLV+LLG C ++ E++ GNL +
Sbjct: 46 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 104
Query: 166 LHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPK-VVHRDIKSSNILIDKHWNPKVS 224
L C+ E+ ++L A +S E LE K +HRD+ + N L+ ++ KV+
Sbjct: 105 LR----ECNRQ--EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA 158
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRIP- 282
DFGL++L+ ++ + APE + + +SDV++FG+L+ E+ + G P
Sbjct: 159 DFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
Query: 283 --VDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNAQ 340
+D S+ + E L+K PEG PEK + + C N
Sbjct: 219 PGIDLSQ------VYELLEKDYRMERPEGC-----PEK--------VYELMRACWQWNPS 259
Query: 341 KRPKMGHVVHMLEAQESPSKEPSNSFQDRYRASPKNELIEKQVTESG 387
RP + +F+ ++ S ++ +EK++ + G
Sbjct: 260 DRPSFAEI--------------HQAFETMFQESSISDEVEKELGKQG 292
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 119/259 (45%), Gaps = 33/259 (12%)
Query: 106 VAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQW 165
VAVK L + + E EF E + ++H NLV+LLG C ++ E++ GNL +
Sbjct: 46 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 104
Query: 166 LHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPK-VVHRDIKSSNILIDKHWNPKVS 224
L C+ E+ ++L A +S E LE K +HRD+ + N L+ ++ KV+
Sbjct: 105 LR----ECNRQ--EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA 158
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRIP- 282
DFGL++L+ ++ + APE + + +SDV++FG+L+ E+ + G P
Sbjct: 159 DFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
Query: 283 --VDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNAQ 340
+D S+ + E L+K PEG PEK + + C N
Sbjct: 219 PGIDLSQ------VYELLEKDYRMERPEGC-----PEK--------VYELMRACWQWNPS 259
Query: 341 KRPKMGHVVHMLEA--QES 357
RP + E QES
Sbjct: 260 DRPSFAEIHQAFETMFQES 278
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 119/259 (45%), Gaps = 33/259 (12%)
Query: 106 VAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQW 165
VAVK L + + E EF E + ++H NLV+LLG C ++ E++ GNL +
Sbjct: 42 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 100
Query: 166 LHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPK-VVHRDIKSSNILIDKHWNPKVS 224
L C+ E+ ++L A +S E LE K +HRD+ + N L+ ++ KV+
Sbjct: 101 LR----ECNRQ--EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA 154
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRIP- 282
DFGL++L+ ++ + APE + + +SDV++FG+L+ E+ + G P
Sbjct: 155 DFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 214
Query: 283 --VDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNAQ 340
+D S+ + E L+K PEG PEK + + C N
Sbjct: 215 PGIDLSQ------VYELLEKDYRMERPEGC-----PEK--------VYELMRACWQWNPS 255
Query: 341 KRPKMGHVVHMLEA--QES 357
RP + E QES
Sbjct: 256 DRPSFAEIHQAFETMFQES 274
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 98/192 (51%), Gaps = 14/192 (7%)
Query: 102 DNSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
D VAVK L + A ++F E E + ++H+++V+ G C EG ++V+EY+ +G+
Sbjct: 42 DKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGD 101
Query: 162 LEQWL--HG-------DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSN 212
L ++L HG + P + LT ++I A G+ YL VHRD+ + N
Sbjct: 102 LNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYL---ASQHFVHRDLATRN 158
Query: 213 ILIDKHWNPKVSDFGLAKLLGSESSY-ITTRVMGTFGYVAPEYASTGMLNERSDVYSFGI 271
L+ ++ K+ DFG+++ + S Y + M ++ PE SDV+S G+
Sbjct: 159 CLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGV 218
Query: 272 LIMEVIS-GRIP 282
++ E+ + G+ P
Sbjct: 219 VLWEIFTYGKQP 230
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 119/259 (45%), Gaps = 33/259 (12%)
Query: 106 VAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQW 165
VAVK L + + E EF E + ++H NLV+LLG C ++ E++ GNL +
Sbjct: 43 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 101
Query: 166 LHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPK-VVHRDIKSSNILIDKHWNPKVS 224
L C+ E+ ++L A +S E LE K +HRD+ + N L+ ++ KV+
Sbjct: 102 LR----ECNRQ--EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA 155
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRIP- 282
DFGL++L+ ++ + APE + + +SDV++FG+L+ E+ + G P
Sbjct: 156 DFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 215
Query: 283 --VDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNAQ 340
+D S+ + E L+K PEG PEK + + C N
Sbjct: 216 PGIDLSQ------VYELLEKDYRMERPEGC-----PEK--------VYELMRACWQWNPS 256
Query: 341 KRPKMGHVVHMLEA--QES 357
RP + E QES
Sbjct: 257 DRPSFAEIHQAFETMFQES 275
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 130/287 (45%), Gaps = 45/287 (15%)
Query: 106 VAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQW 165
VAVK L + + E EF E + ++H NLV+LLG C ++ E++ GNL +
Sbjct: 46 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 104
Query: 166 LHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPK-VVHRDIKSSNILIDKHWNPKVS 224
L C+ E+ ++L A +S E LE K +HRD+ + N L+ ++ KV+
Sbjct: 105 LR----ECNRQ--EVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA 158
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRIP- 282
DFGL++L+ ++ + APE + + +SDV++FG+L+ E+ + G P
Sbjct: 159 DFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
Query: 283 --VDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNAQ 340
+D S+ + E L+K PEG PEK + + C N
Sbjct: 219 PGIDLSQ------VYELLEKDYRMERPEGC-----PEK--------VYELMRACWQWNPS 259
Query: 341 KRPKMGHVVHMLEAQESPSKEPSNSFQDRYRASPKNELIEKQVTESG 387
RP + +F+ ++ S ++ +EK++ + G
Sbjct: 260 DRPSFAEI--------------HQAFETMFQESSISDEVEKELGKRG 292
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 130/287 (45%), Gaps = 45/287 (15%)
Query: 106 VAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQW 165
VAVK L + + E EF E + ++H NLV+LLG C ++ E++ GNL +
Sbjct: 41 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDY 99
Query: 166 LHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPK-VVHRDIKSSNILIDKHWNPKVS 224
L C+ E+ ++L A +S E LE K +HRD+ + N L+ ++ KV+
Sbjct: 100 LR----ECNRQ--EVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA 153
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRIP- 282
DFGL++L+ ++ + APE + + +SDV++FG+L+ E+ + G P
Sbjct: 154 DFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
Query: 283 --VDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNAQ 340
+D S+ + E L+K PEG PEK + + C N
Sbjct: 214 PGIDLSQ------VYELLEKDYRMERPEGC-----PEK--------VYELMRACWQWNPS 254
Query: 341 KRPKMGHVVHMLEAQESPSKEPSNSFQDRYRASPKNELIEKQVTESG 387
RP + +F+ ++ S ++ +EK++ + G
Sbjct: 255 DRPSFAEI--------------HQAFETMFQESSISDEVEKELGKRG 287
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 105/228 (46%), Gaps = 14/228 (6%)
Query: 105 KVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
KV K L G E + + EVE +RH N++RL GY + L+ EY G +
Sbjct: 42 KVLFKAQLEKAG-VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV-- 98
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
+ ++ S + I A LSY H +V+HRDIK N+L+ K++
Sbjct: 99 --YRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIA 153
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVD 284
DFG + + + SS TT + GT Y+ PE M +E+ D++S G+L E + G+ P +
Sbjct: 154 DFGWS--VHAPSSRRTT-LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
Query: 285 ---YSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILL 329
Y + ++ +E+ ++ L P+ R + R +L
Sbjct: 211 ANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 105/228 (46%), Gaps = 14/228 (6%)
Query: 105 KVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
KV K L G E + + EVE +RH N++RL GY + L+ EY G +
Sbjct: 38 KVLFKAQLEKAG-VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV-- 94
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
+ ++ S + I A LSY H +V+HRDIK N+L+ K++
Sbjct: 95 --YRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIA 149
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVD 284
DFG + + + SS TT + GT Y+ PE M +E+ D++S G+L E + G+ P +
Sbjct: 150 DFGWS--VHAPSSRRTT-LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 206
Query: 285 ---YSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILL 329
Y + ++ +E+ ++ L P+ R + R +L
Sbjct: 207 ANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 254
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 130/287 (45%), Gaps = 45/287 (15%)
Query: 106 VAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQW 165
VAVK L + + E EF E + ++H NLV+LLG C ++ E++ GNL +
Sbjct: 41 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 99
Query: 166 LHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPK-VVHRDIKSSNILIDKHWNPKVS 224
L C+ E+ ++L A +S E LE K +HRD+ + N L+ ++ KV+
Sbjct: 100 LR----ECNRQ--EVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA 153
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRIP- 282
DFGL++L+ ++ + APE + + +SDV++FG+L+ E+ + G P
Sbjct: 154 DFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
Query: 283 --VDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNAQ 340
+D S+ + E L+K PEG PEK + + C N
Sbjct: 214 PGIDLSQ------VYELLEKDYRMERPEGC-----PEK--------VYELMRACWQWNPS 254
Query: 341 KRPKMGHVVHMLEAQESPSKEPSNSFQDRYRASPKNELIEKQVTESG 387
RP + +F+ ++ S ++ +EK++ + G
Sbjct: 255 DRPSFAEI--------------HQAFETMFQESSISDEVEKELGKRG 287
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 119/259 (45%), Gaps = 33/259 (12%)
Query: 106 VAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQW 165
VAVK L + + E EF E + ++H NLV+LLG C ++ E++ GNL +
Sbjct: 41 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDY 99
Query: 166 LHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPK-VVHRDIKSSNILIDKHWNPKVS 224
L C+ E+ ++L A +S E LE K +HRD+ + N L+ ++ KV+
Sbjct: 100 LR----ECNRQ--EVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA 153
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRIP- 282
DFGL++L+ ++ + APE + + +SDV++FG+L+ E+ + G P
Sbjct: 154 DFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
Query: 283 --VDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNAQ 340
+D S+ + E L+K PEG PEK + + C N
Sbjct: 214 PGIDLSQ------VYELLEKDYRMERPEGC-----PEK--------VYELMRACWQWNPS 254
Query: 341 KRPKMGHVVHMLEA--QES 357
RP + E QES
Sbjct: 255 DRPSFAEIHQAFETMFQES 273
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 122/252 (48%), Gaps = 26/252 (10%)
Query: 106 VAVKNL-LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K L + + R+F E +G+ H N++RL G + M+V E + NG+L+
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDS 135
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
+L + + + ++ G A G+ YL + VHRD+ + NILI+ + KVS
Sbjct: 136 FLRKHDAQFTVIQL---VGMLRGIASGMKYLSD---MGAVHRDLAARNILINSNLVCKVS 189
Query: 225 DFGLAKLL--GSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIP 282
DFGL+++L E++Y T + +PE + SDV+S+GI++ EV+S
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS---- 245
Query: 283 VDYS-RPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNAQK 341
Y RP E++ + +K + EG P + P + + + L C +
Sbjct: 246 --YGERPYWEMSNQDVIKAV-----DEGYRLPPPMDCPAA-----LYQLMLDCWQKDRNN 293
Query: 342 RPKMGHVVHMLE 353
RPK +V +L+
Sbjct: 294 RPKFEQIVSILD 305
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 116/254 (45%), Gaps = 31/254 (12%)
Query: 106 VAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQW 165
VAVK L + + E EF E + ++H NLV+LLG C ++ E++ GNL +
Sbjct: 46 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 104
Query: 166 LHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPK-VVHRDIKSSNILIDKHWNPKVS 224
L C+ E+ ++L A +S E LE K +HRD+ + N L+ ++ KV+
Sbjct: 105 LR----ECNRQ--EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA 158
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRIP- 282
DFGL++L+ ++ + APE + + +SDV++FG+L+ E+ + G P
Sbjct: 159 DFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
Query: 283 --VDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNAQ 340
+D S+ + E L+K PEG PEK + + C N
Sbjct: 219 PGIDLSQ------VYELLEKDYRMERPEGC-----PEK--------VYELMRACWQWNPS 259
Query: 341 KRPKMGHVVHMLEA 354
RP + E
Sbjct: 260 DRPSFAEIHQAFET 273
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 105/228 (46%), Gaps = 14/228 (6%)
Query: 105 KVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
KV K L G E + + EVE +RH N++RL GY + L+ EY G +
Sbjct: 36 KVLFKAQLEKAG-VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV-- 92
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
+ ++ S + I A LSY H +V+HRDIK N+L+ K++
Sbjct: 93 --YRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIA 147
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVD 284
DFG + + + SS TT + GT Y+ PE M +E+ D++S G+L E + G+ P +
Sbjct: 148 DFGWS--VHAPSSRRTT-LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 204
Query: 285 ---YSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILL 329
Y + ++ +E+ ++ L P+ R + R +L
Sbjct: 205 ANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 252
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 119/259 (45%), Gaps = 33/259 (12%)
Query: 106 VAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQW 165
VAVK L + + E EF E + ++H NLV+LLG C ++ E++ GNL +
Sbjct: 41 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 99
Query: 166 LHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPK-VVHRDIKSSNILIDKHWNPKVS 224
L C+ E+ ++L A +S E LE K +HRD+ + N L+ ++ KV+
Sbjct: 100 LR----ECNRQ--EVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA 153
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRIP- 282
DFGL++L+ ++ + APE + + +SDV++FG+L+ E+ + G P
Sbjct: 154 DFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
Query: 283 --VDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNAQ 340
+D S+ + E L+K PEG PEK + + C N
Sbjct: 214 PGIDLSQ------VYELLEKDYRMERPEGC-----PEK--------VYELMRACWQWNPS 254
Query: 341 KRPKMGHVVHMLEA--QES 357
RP + E QES
Sbjct: 255 DRPSFAEIHQAFETMFQES 273
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 119/259 (45%), Gaps = 33/259 (12%)
Query: 106 VAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQW 165
VAVK L + + E EF E + ++H NLV+LLG C ++ E++ GNL +
Sbjct: 45 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 103
Query: 166 LHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPK-VVHRDIKSSNILIDKHWNPKVS 224
L C+ E+ ++L A +S E LE K +HRD+ + N L+ ++ KV+
Sbjct: 104 LR----ECNRQ--EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA 157
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRIP- 282
DFGL++L+ ++ + APE + + +SDV++FG+L+ E+ + G P
Sbjct: 158 DFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 217
Query: 283 --VDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNAQ 340
+D S+ + E L+K PEG PEK + + C N
Sbjct: 218 PGIDLSQ------VYELLEKDYRMERPEGC-----PEK--------VYELMRACWQWNPS 258
Query: 341 KRPKMGHVVHMLEA--QES 357
RP + E QES
Sbjct: 259 DRPSFAEIHQAFETMFQES 277
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 119/259 (45%), Gaps = 33/259 (12%)
Query: 106 VAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQW 165
VAVK L + + E EF E + ++H NLV+LLG C ++ E++ GNL +
Sbjct: 54 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 112
Query: 166 LHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPK-VVHRDIKSSNILIDKHWNPKVS 224
L C+ E+ ++L A +S E LE K +HRD+ + N L+ ++ KV+
Sbjct: 113 LR----ECNRQ--EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA 166
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRIP- 282
DFGL++L+ ++ + APE + + +SDV++FG+L+ E+ + G P
Sbjct: 167 DFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 226
Query: 283 --VDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNAQ 340
+D S+ + E L+K PEG PEK + + C N
Sbjct: 227 PGIDLSQ------VYELLEKDYRMERPEGC-----PEK--------VYELMRACWQWNPS 267
Query: 341 KRPKMGHVVHMLEA--QES 357
RP + E QES
Sbjct: 268 DRPSFAEIHQAFETMFQES 286
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 105/228 (46%), Gaps = 14/228 (6%)
Query: 105 KVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
KV K L G E + + EVE +RH N++RL GY + L+ EY G +
Sbjct: 43 KVLFKAQLEKAG-VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV-- 99
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
+ ++ S + I A LSY H +V+HRDIK N+L+ K++
Sbjct: 100 --YRELQKLSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIA 154
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVD 284
DFG + + + SS TT + GT Y+ PE M +E+ D++S G+L E + G+ P +
Sbjct: 155 DFGWS--VHAPSSRRTT-LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 211
Query: 285 ---YSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILL 329
Y + ++ +E+ ++ L P+ R + R +L
Sbjct: 212 ANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 259
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 116/254 (45%), Gaps = 31/254 (12%)
Query: 106 VAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQW 165
VAVK L + + E EF E + ++H NLV+LLG C ++ E++ GNL +
Sbjct: 46 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDY 104
Query: 166 LHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPK-VVHRDIKSSNILIDKHWNPKVS 224
L C+ E+ ++L A +S E LE K +HRD+ + N L+ ++ KV+
Sbjct: 105 LR----ECNRQ--EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA 158
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRIP- 282
DFGL++L+ ++ + APE + + +SDV++FG+L+ E+ + G P
Sbjct: 159 DFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
Query: 283 --VDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNAQ 340
+D S+ + E L+K PEG PEK + + C N
Sbjct: 219 PGIDLSQ------VYELLEKDYRMERPEGC-----PEK--------VYELMRACWQWNPS 259
Query: 341 KRPKMGHVVHMLEA 354
RP + E
Sbjct: 260 DRPSFAEIHQAFET 273
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 119/259 (45%), Gaps = 33/259 (12%)
Query: 106 VAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQW 165
VAVK L + + E EF E + ++H NLV+LLG C ++ E++ GNL +
Sbjct: 43 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 101
Query: 166 LHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPK-VVHRDIKSSNILIDKHWNPKVS 224
L C+ E+ ++L A +S E LE K +HRD+ + N L+ ++ KV+
Sbjct: 102 LR----ECNRQ--EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA 155
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRIP- 282
DFGL++L+ ++ + APE + + +SDV++FG+L+ E+ + G P
Sbjct: 156 DFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 215
Query: 283 --VDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNAQ 340
+D S+ + E L+K PEG PEK + + C N
Sbjct: 216 PGIDLSQ------VYELLEKDYRMERPEGC-----PEK--------VYELMRACWQWNPS 256
Query: 341 KRPKMGHVVHMLEA--QES 357
RP + E QES
Sbjct: 257 DRPSFAEIHQAFETMFQES 275
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 119/259 (45%), Gaps = 33/259 (12%)
Query: 106 VAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQW 165
VAVK L + + E EF E + ++H NLV+LLG C ++ E++ GNL +
Sbjct: 43 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 101
Query: 166 LHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPK-VVHRDIKSSNILIDKHWNPKVS 224
L C+ E+ ++L A +S E LE K +HRD+ + N L+ ++ KV+
Sbjct: 102 LR----ECNRQ--EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA 155
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRIP- 282
DFGL++L+ ++ + APE + + +SDV++FG+L+ E+ + G P
Sbjct: 156 DFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 215
Query: 283 --VDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNAQ 340
+D S+ + E L+K PEG PEK + + C N
Sbjct: 216 PGIDLSQ------VYELLEKDYRMERPEGC-----PEK--------VYELMRACWQWNPS 256
Query: 341 KRPKMGHVVHMLEA--QES 357
RP + E QES
Sbjct: 257 DRPSFAEIHQAFETMFQES 275
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 95/199 (47%), Gaps = 22/199 (11%)
Query: 102 DNSKVAVKNLLNNRGQAERE------FKVEVEAIGRVRHKNLVRLL----GYCAEGAHRM 151
D+ VAVK L R R+ F+ E + + H +V + G
Sbjct: 36 DHRDVAVKVL---RADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPY 92
Query: 152 LVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSS 211
+V EYV+ L +H + P+T + + +I + L++ H+ ++HRD+K +
Sbjct: 93 IVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPA 145
Query: 212 NILIDKHWNPKVSDFGLAKLLGSESSYI--TTRVMGTFGYVAPEYASTGMLNERSDVYSF 269
NILI KV DFG+A+ + + + T V+GT Y++PE A ++ RSDVYS
Sbjct: 146 NILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 270 GILIMEVISGRIPVDYSRP 288
G ++ EV++G P P
Sbjct: 206 GCVLYEVLTGEPPFTGDSP 224
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 121/251 (48%), Gaps = 24/251 (9%)
Query: 106 VAVKNL-LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K L + + R+F E +G+ H N++RL G + M+V E + NG+L+
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDS 135
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
+L + + + ++ G A G+ YL + VHRD+ + NILI+ + KVS
Sbjct: 136 FLRKHDAQFTVIQL---VGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVS 189
Query: 225 DFGLAKLL--GSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIP 282
DFGL+++L E++Y T + +PE + SDV+S+GI++ EV+S
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG-- 247
Query: 283 VDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNAQKR 342
RP E++ + +K + EG P + P + + + L C + R
Sbjct: 248 ---ERPYWEMSNQDVIKAV-----DEGYRLPPPMDCPAA-----LYQLMLDCWQKDRNNR 294
Query: 343 PKMGHVVHMLE 353
PK +V +L+
Sbjct: 295 PKFEQIVSILD 305
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 119/259 (45%), Gaps = 33/259 (12%)
Query: 106 VAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQW 165
VAVK L + + E EF E + ++H NLV+LLG C ++ E++ GNL +
Sbjct: 41 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 99
Query: 166 LHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPK-VVHRDIKSSNILIDKHWNPKVS 224
L C+ E+ ++L A +S E LE K +HRD+ + N L+ ++ KV+
Sbjct: 100 LR----ECNRQ--EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA 153
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRIP- 282
DFGL++L+ ++ + APE + + +SDV++FG+L+ E+ + G P
Sbjct: 154 DFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
Query: 283 --VDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNAQ 340
+D S+ + E L+K PEG PEK + + C N
Sbjct: 214 PGIDLSQ------VYELLEKDYRMERPEGC-----PEK--------VYELMRACWQWNPS 254
Query: 341 KRPKMGHVVHMLEA--QES 357
RP + E QES
Sbjct: 255 DRPSFAEIHQAFETMFQES 273
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 122/252 (48%), Gaps = 26/252 (10%)
Query: 106 VAVKNL-LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K L + + R+F E +G+ H N++RL G + M+V E + NG+L+
Sbjct: 47 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDS 106
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
+L + + + ++ G A G+ YL + VHRD+ + NILI+ + KVS
Sbjct: 107 FLRKHDAQFTVIQ---LVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVS 160
Query: 225 DFGLAKLL--GSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIP 282
DFGL+++L E++Y T + +PE + SDV+S+GI++ EV+S
Sbjct: 161 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS---- 216
Query: 283 VDYS-RPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNAQK 341
Y RP E++ + +K + EG P + P + + + L C +
Sbjct: 217 --YGERPYWEMSNQDVIKAV-----DEGYRLPPPMDCPAA-----LYQLMLDCWQKDRNN 264
Query: 342 RPKMGHVVHMLE 353
RPK +V +L+
Sbjct: 265 RPKFEQIVSILD 276
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 101/228 (44%), Gaps = 14/228 (6%)
Query: 105 KVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
KV K L G E + + EVE +RH N++RL GY + L+ EY G +
Sbjct: 39 KVLFKAQLEKAG-VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV-- 95
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
+ ++ S + I A LSY H +V+HRDIK N+L+ K++
Sbjct: 96 --YRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIA 150
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVD 284
DFG + S T + GT Y+ PE M +E+ D++S G+L E + G+ P +
Sbjct: 151 DFGWSVHAPSSRR---TELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
Query: 285 ---YSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILL 329
Y + ++ +E+ ++ L P+ R + R +L
Sbjct: 208 ANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 116/253 (45%), Gaps = 31/253 (12%)
Query: 106 VAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQW 165
VAVK L + + E EF E + ++H NLV+LLG C ++ E++ GNL +
Sbjct: 41 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 99
Query: 166 LHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPK-VVHRDIKSSNILIDKHWNPKVS 224
L C+ E+ ++L A +S E LE K +HRD+ + N L+ ++ KV+
Sbjct: 100 LR----ECNRQ--EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA 153
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRIP- 282
DFGL++L+ ++ + APE + + +SDV++FG+L+ E+ + G P
Sbjct: 154 DFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
Query: 283 --VDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNAQ 340
+D S+ + E L+K PEG PEK + + C N
Sbjct: 214 PGIDLSQ------VYELLEKDYRMERPEGC-----PEK--------VYELMRACWQWNPS 254
Query: 341 KRPKMGHVVHMLE 353
RP + E
Sbjct: 255 DRPSFAEIHQAFE 267
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 95/199 (47%), Gaps = 22/199 (11%)
Query: 102 DNSKVAVKNLLNNRGQAERE------FKVEVEAIGRVRHKNLVRLL----GYCAEGAHRM 151
D+ VAVK L R R+ F+ E + + H +V + G
Sbjct: 36 DHRDVAVKVL---RADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPY 92
Query: 152 LVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSS 211
+V EYV+ L +H + P+T + + +I + L++ H+ ++HRD+K +
Sbjct: 93 IVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPA 145
Query: 212 NILIDKHWNPKVSDFGLAKLLGSESSYIT--TRVMGTFGYVAPEYASTGMLNERSDVYSF 269
NI+I KV DFG+A+ + + +T V+GT Y++PE A ++ RSDVYS
Sbjct: 146 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 270 GILIMEVISGRIPVDYSRP 288
G ++ EV++G P P
Sbjct: 206 GCVLYEVLTGEPPFTGDSP 224
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 95/199 (47%), Gaps = 22/199 (11%)
Query: 102 DNSKVAVKNLLNNRGQAERE------FKVEVEAIGRVRHKNLVRLL----GYCAEGAHRM 151
D+ VAVK L R R+ F+ E + + H +V + G
Sbjct: 36 DHRDVAVKVL---RADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPY 92
Query: 152 LVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSS 211
+V EYV+ L +H + P+T + + +I + L++ H+ ++HRD+K +
Sbjct: 93 IVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPA 145
Query: 212 NILIDKHWNPKVSDFGLAKLLGSESSYIT--TRVMGTFGYVAPEYASTGMLNERSDVYSF 269
NI+I KV DFG+A+ + + +T V+GT Y++PE A ++ RSDVYS
Sbjct: 146 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 270 GILIMEVISGRIPVDYSRP 288
G ++ EV++G P P
Sbjct: 206 GCVLYEVLTGEPPFTGDSP 224
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 101/228 (44%), Gaps = 14/228 (6%)
Query: 105 KVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
KV K L G E + + EVE +RH N++RL GY + L+ EY G +
Sbjct: 40 KVLFKAQLEKAG-VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV-- 96
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
+ ++ S + I A LSY H +V+HRDIK N+L+ K++
Sbjct: 97 --YRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIA 151
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVD 284
DFG + S T + GT Y+ PE M +E+ D++S G+L E + G+ P +
Sbjct: 152 DFGWSVHAPSSRR---TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
Query: 285 ---YSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILL 329
Y + ++ +E+ ++ L P+ R + R +L
Sbjct: 209 ANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 256
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 101/228 (44%), Gaps = 14/228 (6%)
Query: 105 KVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
KV K L G E + + EVE +RH N++RL GY + L+ EY G +
Sbjct: 39 KVLFKAQLEKAG-VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV-- 95
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
+ ++ S + I A LSY H +V+HRDIK N+L+ K++
Sbjct: 96 --YRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIA 150
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVD 284
DFG + S T + GT Y+ PE M +E+ D++S G+L E + G+ P +
Sbjct: 151 DFGWSVHAPSSRR---TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
Query: 285 ---YSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILL 329
Y + ++ +E+ ++ L P+ R + R +L
Sbjct: 208 ANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 105/228 (46%), Gaps = 14/228 (6%)
Query: 105 KVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
KV K L G E + + EVE +RH N++RL GY + L+ EY G +
Sbjct: 41 KVLFKAQLEKAG-VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV-- 97
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
+ ++ S + I A LSY H +V+HRDIK N+L+ K++
Sbjct: 98 --YRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIA 152
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVD 284
+FG + + + SS TT + GT Y+ PE M +E+ D++S G+L E + G+ P +
Sbjct: 153 NFGWS--VHAPSSRRTT-LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 209
Query: 285 ---YSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILL 329
Y + ++ +E+ ++ L P+ R + R +L
Sbjct: 210 ANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 257
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 101/228 (44%), Gaps = 14/228 (6%)
Query: 105 KVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
KV K L G E + + EVE +RH N++RL GY + L+ EY G +
Sbjct: 39 KVLFKAQLEKAG-VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV-- 95
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
+ ++ S + I A LSY H +V+HRDIK N+L+ K++
Sbjct: 96 --YRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIA 150
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVD 284
DFG + S T + GT Y+ PE M +E+ D++S G+L E + G+ P +
Sbjct: 151 DFGWSVHAPSSRR---TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
Query: 285 ---YSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILL 329
Y + ++ +E+ ++ L P+ R + R +L
Sbjct: 208 ANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 101/228 (44%), Gaps = 14/228 (6%)
Query: 105 KVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
KV K L G E + + EVE +RH N++RL GY + L+ EY G +
Sbjct: 44 KVLFKAQLEKAG-VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV-- 100
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
+ ++ S + I A LSY H +V+HRDIK N+L+ K++
Sbjct: 101 --YRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIA 155
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVD 284
DFG + S T + GT Y+ PE M +E+ D++S G+L E + G+ P +
Sbjct: 156 DFGWSVHAPSSRR---TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
Query: 285 ---YSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILL 329
Y + ++ +E+ ++ L P+ R + R +L
Sbjct: 213 ANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 260
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 101/228 (44%), Gaps = 14/228 (6%)
Query: 105 KVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
KV K L G E + + EVE +RH N++RL GY + L+ EY G +
Sbjct: 39 KVLFKAQLEKAG-VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV-- 95
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
+ ++ S + I A LSY H +V+HRDIK N+L+ K++
Sbjct: 96 --YRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIA 150
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVD 284
DFG + S T + GT Y+ PE M +E+ D++S G+L E + G+ P +
Sbjct: 151 DFGWSVHAPSSRR---TXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
Query: 285 ---YSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILL 329
Y + ++ +E+ ++ L P+ R + R +L
Sbjct: 208 ANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 104/228 (45%), Gaps = 14/228 (6%)
Query: 105 KVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
KV K L G E + + EVE +RH N++RL GY + L+ EY G
Sbjct: 40 KVLFKAQLEKAG-VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT--- 95
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
++ ++ S + I A LSY H +V+HRDIK N+L+ K++
Sbjct: 96 -VYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIA 151
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVD 284
DFG + + + SS T + GT Y+ PE M +E+ D++S G+L E + G+ P +
Sbjct: 152 DFGWS--VHAPSSRRDT-LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
Query: 285 ---YSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILL 329
Y + ++ +E+ ++ L P+ R + R +L
Sbjct: 209 ANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 256
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 101/221 (45%), Gaps = 17/221 (7%)
Query: 105 KVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
KV K L G E + + EVE +RH N++RL GY + L+ EY G
Sbjct: 43 KVLFKTQLEKAG-VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT--- 98
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
++ ++ S + I A LSY H +V+HRDIK N+L+ + K++
Sbjct: 99 -VYRELQKLSRFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSNGELKIA 154
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVD 284
DFG + + + SS TT + GT Y+ PE M +E+ D++S G+L E + G P +
Sbjct: 155 DFGWS--VHAPSSRRTT-LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFE 211
Query: 285 YSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLK 325
E I ++ + EG D SRLLK
Sbjct: 212 AHTYQETYRRISRVEFTFPDFVTEGARD------LISRLLK 246
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 93/182 (51%), Gaps = 12/182 (6%)
Query: 106 VAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQW 165
VAVK ++ +E EF E + + ++ H LV+ G C++ +V EY++NG L +
Sbjct: 35 VAVK-MIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNY 93
Query: 166 L--HGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKV 223
L HG S L + + +G+++L + +HRD+ + N L+D+ KV
Sbjct: 94 LRSHGKGLEPSQL-----LEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKV 145
Query: 224 SDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRIP 282
SDFG+ + + + + + APE + +SDV++FGIL+ EV S G++P
Sbjct: 146 SDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMP 205
Query: 283 VD 284
D
Sbjct: 206 YD 207
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 121/272 (44%), Gaps = 30/272 (11%)
Query: 105 KVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
KV K L G E + + EVE +RH N++RL GY + L+ EY G
Sbjct: 44 KVLFKAQLEKAG-VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT--- 99
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
++ ++ S + I A LSY H +V+HRDIK N+L+ K++
Sbjct: 100 -VYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIA 155
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVD 284
DFG + + + SS TT + GT Y+ PE +E+ D++S G+L E + G+ P +
Sbjct: 156 DFGWS--VHAPSSRRTT-LCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFE 212
Query: 285 YSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNAQKRPK 344
+ E I ++ + EG D SRLLK N +RP
Sbjct: 213 ANTYQETYKRISRVEFTFPDFVTEGARD------LISRLLKH-----------NPSQRPX 255
Query: 345 MGHVVHMLEAQESPSKEPSNSFQDRYRASPKN 376
+ V+ + SK PSN Q++ AS ++
Sbjct: 256 LREVLEHPWITANSSK-PSNC-QNKESASKQS 285
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 120/252 (47%), Gaps = 30/252 (11%)
Query: 103 NSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
++KVAVK + E F E + ++H LV+L + ++ E++ G+L
Sbjct: 206 HTKVAVKTMKPGSMSVE-AFLAEANVMKTLQHDKLVKLHAVVTKEPI-YIITEFMAKGSL 263
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
+L D G PL I + + A+G++++ + +HRD++++NIL+ K
Sbjct: 264 LDFLKSDEGSKQPLPKLIDFSAQI--AEGMAFIEQR---NYIHRDLRAANILVSASLVCK 318
Query: 223 VSDFGLAKLLGSESSYITTRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
++DFGLA RV F + APE + G +SDV+SFGIL+ME+++ G
Sbjct: 319 IADFGLA------------RVGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYG 366
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRN-PEGVLDPKL-------PEKPTSRLLKRILLVA 331
RIP PE + +E +M N PE + + + E+PT ++ +L
Sbjct: 367 RIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDF 426
Query: 332 LRCVDPNAQKRP 343
+ Q++P
Sbjct: 427 YTATESQXQQQP 438
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 105/228 (46%), Gaps = 14/228 (6%)
Query: 105 KVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
KV K L G E + + EVE +RH N++RL GY + L+ EY G +
Sbjct: 42 KVLFKAQLEKAG-VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV-- 98
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
+ ++ S + I A LSY H +V+HRDIK N+L+ K++
Sbjct: 99 --YRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIA 153
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVD 284
+FG + + + SS TT + GT Y+ PE M +E+ D++S G+L E + G+ P +
Sbjct: 154 NFGWS--VHAPSSRRTT-LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
Query: 285 ---YSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILL 329
Y + ++ +E+ ++ L P+ R + R +L
Sbjct: 211 ANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 75/139 (53%), Gaps = 9/139 (6%)
Query: 152 LVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSS 211
+V EYV+ L +H + P+T + + +I + L++ H+ ++HRD+K +
Sbjct: 93 IVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPA 145
Query: 212 NILIDKHWNPKVSDFGLAKLLGSESSYIT--TRVMGTFGYVAPEYASTGMLNERSDVYSF 269
NI+I KV DFG+A+ + + +T V+GT Y++PE A ++ RSDVYS
Sbjct: 146 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 270 GILIMEVISGRIPVDYSRP 288
G ++ EV++G P P
Sbjct: 206 GCVLYEVLTGEPPFTGDSP 224
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 119/259 (45%), Gaps = 33/259 (12%)
Query: 106 VAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQW 165
VAVK L + + E EF E + ++H NLV+LLG C ++ E++ GNL +
Sbjct: 248 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 306
Query: 166 LHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPK-VVHRDIKSSNILIDKHWNPKVS 224
L C+ E+ ++L A +S E LE K +HR++ + N L+ ++ KV+
Sbjct: 307 LR----ECN--RQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVA 360
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRIP- 282
DFGL++L+ ++ + APE + + +SDV++FG+L+ E+ + G P
Sbjct: 361 DFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 420
Query: 283 --VDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNAQ 340
+D S+ + E L+K PEG PEK + + C N
Sbjct: 421 PGIDLSQ------VYELLEKDYRMERPEGC-----PEK--------VYELMRACWQWNPS 461
Query: 341 KRPKMGHVVHMLEA--QES 357
RP + E QES
Sbjct: 462 DRPSFAEIHQAFETMFQES 480
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 75/139 (53%), Gaps = 9/139 (6%)
Query: 152 LVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSS 211
+V EYV+ L +H + P+T + + +I + L++ H+ ++HRD+K +
Sbjct: 93 IVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPA 145
Query: 212 NILIDKHWNPKVSDFGLAKLLGSESSYIT--TRVMGTFGYVAPEYASTGMLNERSDVYSF 269
NI+I KV DFG+A+ + + +T V+GT Y++PE A ++ RSDVYS
Sbjct: 146 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 270 GILIMEVISGRIPVDYSRP 288
G ++ EV++G P P
Sbjct: 206 GCVLYEVLTGEPPFTGDSP 224
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 100/228 (43%), Gaps = 14/228 (6%)
Query: 105 KVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
KV K L G E + + EVE +RH N++RL GY + L+ EY G
Sbjct: 44 KVLFKAQLEKAG-VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGE--- 99
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
++ ++ S + I A LSY H +V+HRDIK N+L+ K++
Sbjct: 100 -VYKELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIA 155
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVD 284
DFG + S + GT Y+ PE M +E+ D++S G+L E + G+ P +
Sbjct: 156 DFGWSVHAPSSRR---XXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
Query: 285 ---YSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILL 329
Y + ++ +E+ ++ L P+ R + R +L
Sbjct: 213 ANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 260
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 119/259 (45%), Gaps = 33/259 (12%)
Query: 106 VAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQW 165
VAVK L + + E EF E + ++H NLV+LLG C ++ E++ GNL +
Sbjct: 287 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 345
Query: 166 LHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPK-VVHRDIKSSNILIDKHWNPKVS 224
L C+ E+ ++L A +S E LE K +HR++ + N L+ ++ KV+
Sbjct: 346 LR----ECN--RQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVA 399
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRIP- 282
DFGL++L+ ++ + APE + + +SDV++FG+L+ E+ + G P
Sbjct: 400 DFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 459
Query: 283 --VDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNAQ 340
+D S+ + E L+K PEG PEK + + C N
Sbjct: 460 PGIDLSQ------VYELLEKDYRMERPEGC-----PEK--------VYELMRACWQWNPS 500
Query: 341 KRPKMGHVVHMLEA--QES 357
RP + E QES
Sbjct: 501 DRPSFAEIHQAFETMFQES 519
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 109/229 (47%), Gaps = 20/229 (8%)
Query: 106 VAVKNLLNNRG-QAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VAVK + R K E+ + H+N+V+ G+ EG + L EY + G L
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 94
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
+ D+G P ++ G YLH G+ + HRDIK N+L+D+ N K+S
Sbjct: 95 RIEPDIGMPEPDAQRFFHQLMAGVV----YLH-GI--GITHRDIKPENLLLDERDNLKIS 147
Query: 225 DFGLAKLLG-SESSYITTRVMGTFGYVAPEYASTGMLN-ERSDVYSFGILIMEVISGRIP 282
DFGLA + + + ++ GT YVAPE + E DV+S GI++ +++G +P
Sbjct: 148 DFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
Query: 283 VD--------YSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRL 323
D YS E+ + KK+ + P +L L E P++R+
Sbjct: 208 WDQPSDSCQEYSDWKEKKTYLNPWKKI--DSAPLALLHKILVENPSARI 254
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 109/229 (47%), Gaps = 20/229 (8%)
Query: 106 VAVKNLLNNRG-QAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VAVK + R K E+ + H+N+V+ G+ EG + L EY + G L
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
+ D+G P ++ G YLH G+ + HRDIK N+L+D+ N K+S
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMAGVV----YLH-GI--GITHRDIKPENLLLDERDNLKIS 146
Query: 225 DFGLAKLLG-SESSYITTRVMGTFGYVAPEYASTGMLN-ERSDVYSFGILIMEVISGRIP 282
DFGLA + + + ++ GT YVAPE + E DV+S GI++ +++G +P
Sbjct: 147 DFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
Query: 283 VD--------YSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRL 323
D YS E+ + KK+ + P +L L E P++R+
Sbjct: 207 WDQPSDSCQEYSDWKEKKTYLNPWKKI--DSAPLALLHKILVENPSARI 253
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 119/259 (45%), Gaps = 33/259 (12%)
Query: 106 VAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQW 165
VAVK L + + E EF E + ++H NLV+LLG C ++ E++ GNL +
Sbjct: 245 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 303
Query: 166 LHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPK-VVHRDIKSSNILIDKHWNPKVS 224
L C+ E+ ++L A +S E LE K +HR++ + N L+ ++ KV+
Sbjct: 304 LR----ECN--RQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVA 357
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRIP- 282
DFGL++L+ ++ + APE + + +SDV++FG+L+ E+ + G P
Sbjct: 358 DFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 417
Query: 283 --VDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNAQ 340
+D S+ + E L+K PEG PEK + + C N
Sbjct: 418 PGIDLSQ------VYELLEKDYRMERPEGC-----PEK--------VYELMRACWQWNPS 458
Query: 341 KRPKMGHVVHMLEA--QES 357
RP + E QES
Sbjct: 459 DRPSFAEIHQAFETMFQES 477
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 109/229 (47%), Gaps = 20/229 (8%)
Query: 106 VAVKNLLNNRG-QAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VAVK + R K E+ + H+N+V+ G+ EG + L EY + G L
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 94
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
+ D+G P ++ G YLH G+ + HRDIK N+L+D+ N K+S
Sbjct: 95 RIEPDIGMPEPDAQRFFHQLMAGVV----YLH-GI--GITHRDIKPENLLLDERDNLKIS 147
Query: 225 DFGLAKLLG-SESSYITTRVMGTFGYVAPEYASTGMLN-ERSDVYSFGILIMEVISGRIP 282
DFGLA + + + ++ GT YVAPE + E DV+S GI++ +++G +P
Sbjct: 148 DFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
Query: 283 VD--------YSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRL 323
D YS E+ + KK+ + P +L L E P++R+
Sbjct: 208 WDQPSDSCQEYSDWKEKKTYLNPWKKI--DSAPLALLHKILVENPSARI 254
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 109/229 (47%), Gaps = 20/229 (8%)
Query: 106 VAVKNLLNNRG-QAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VAVK + R K E+ + H+N+V+ G+ EG + L EY + G L
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
+ D+G P ++ G YLH G+ + HRDIK N+L+D+ N K+S
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMAGVV----YLH-GI--GITHRDIKPENLLLDERDNLKIS 146
Query: 225 DFGLAKLLG-SESSYITTRVMGTFGYVAPEYASTGMLN-ERSDVYSFGILIMEVISGRIP 282
DFGLA + + + ++ GT YVAPE + E DV+S GI++ +++G +P
Sbjct: 147 DFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
Query: 283 VD--------YSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRL 323
D YS E+ + KK+ + P +L L E P++R+
Sbjct: 207 WDQPSDSCQEYSDWKEKKTYLNPWKKI--DSAPLALLHKILVENPSARI 253
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 75/139 (53%), Gaps = 9/139 (6%)
Query: 152 LVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSS 211
+V EYV+ L +H + P+T + + +I + L++ H+ ++HRD+K +
Sbjct: 110 IVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPA 162
Query: 212 NILIDKHWNPKVSDFGLAKLLGSESSYIT--TRVMGTFGYVAPEYASTGMLNERSDVYSF 269
NI+I KV DFG+A+ + + +T V+GT Y++PE A ++ RSDVYS
Sbjct: 163 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 222
Query: 270 GILIMEVISGRIPVDYSRP 288
G ++ EV++G P P
Sbjct: 223 GCVLYEVLTGEPPFTGDSP 241
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 109/229 (47%), Gaps = 20/229 (8%)
Query: 106 VAVKNLLNNRG-QAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VAVK + R K E+ + H+N+V+ G+ EG + L EY + G L
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
+ D+G P ++ G YLH G+ + HRDIK N+L+D+ N K+S
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMAGVV----YLH-GI--GITHRDIKPENLLLDERDNLKIS 146
Query: 225 DFGLAKLLG-SESSYITTRVMGTFGYVAPEYASTGMLN-ERSDVYSFGILIMEVISGRIP 282
DFGLA + + + ++ GT YVAPE + E DV+S GI++ +++G +P
Sbjct: 147 DFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
Query: 283 VD--------YSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRL 323
D YS E+ + KK+ + P +L L E P++R+
Sbjct: 207 WDQPSDSCQEYSDWKEKKTYLNPWKKI--DSAPLALLHKILVENPSARI 253
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 109/229 (47%), Gaps = 20/229 (8%)
Query: 106 VAVKNLLNNRG-QAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VAVK + R K E+ + H+N+V+ G+ EG + L EY + G L
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 94
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
+ D+G P ++ G YLH G+ + HRDIK N+L+D+ N K+S
Sbjct: 95 RIEPDIGMPEPDAQRFFHQLMAGVV----YLH-GI--GITHRDIKPENLLLDERDNLKIS 147
Query: 225 DFGLAKLLG-SESSYITTRVMGTFGYVAPEYASTGMLN-ERSDVYSFGILIMEVISGRIP 282
DFGLA + + + ++ GT YVAPE + E DV+S GI++ +++G +P
Sbjct: 148 DFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
Query: 283 VD--------YSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRL 323
D YS E+ + KK+ + P +L L E P++R+
Sbjct: 208 WDQPSDSCQEYSDWKEKKTYLNPWKKI--DSAPLALLHKILVENPSARI 254
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 91/174 (52%), Gaps = 8/174 (4%)
Query: 106 VAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQW 165
VAVK L + + E EF E + ++H NLV+LLG C +V EY+ GNL +
Sbjct: 60 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDY 118
Query: 166 LHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPK-VVHRDIKSSNILIDKHWNPKVS 224
L C+ E+ ++L A +S E LE K +HRD+ + N L+ ++ KV+
Sbjct: 119 LR----ECNRE--EVTAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVA 172
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS 278
DFGL++L+ ++ + APE + + +SDV++FG+L+ E+ +
Sbjct: 173 DFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIAT 226
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 109/229 (47%), Gaps = 20/229 (8%)
Query: 106 VAVKNLLNNRG-QAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VAVK + R K E+ + H+N+V+ G+ EG + L EY + G L
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
+ D+G P ++ G YLH G+ + HRDIK N+L+D+ N K+S
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMAGVV----YLH-GI--GITHRDIKPENLLLDERDNLKIS 146
Query: 225 DFGLAKLLG-SESSYITTRVMGTFGYVAPEYASTGMLN-ERSDVYSFGILIMEVISGRIP 282
DFGLA + + + ++ GT YVAPE + E DV+S GI++ +++G +P
Sbjct: 147 DFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
Query: 283 VD--------YSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRL 323
D YS E+ + KK+ + P +L L E P++R+
Sbjct: 207 WDQPSDSCQEYSDWKEKKTYLNPWKKI--DSAPLALLHKILVENPSARI 253
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 77/152 (50%), Gaps = 11/152 (7%)
Query: 132 VRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKG 191
V H ++R+ G + ++ +Y+ G L L +P+ + L
Sbjct: 63 VTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLA---- 118
Query: 192 LSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVA 251
L YLH +++RD+K NIL+DK+ + K++DFG AK + +T + GT Y+A
Sbjct: 119 LEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPD----VTYXLCGTPDYIA 171
Query: 252 PEYASTGMLNERSDVYSFGILIMEVISGRIPV 283
PE ST N+ D +SFGILI E+++G P
Sbjct: 172 PEVVSTKPYNKSIDWWSFGILIYEMLAGYTPF 203
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 109/229 (47%), Gaps = 20/229 (8%)
Query: 106 VAVKNLLNNRG-QAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VAVK + R K E+ + H+N+V+ G+ EG + L EY + G L
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
+ D+G P ++ G YLH G+ + HRDIK N+L+D+ N K+S
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMAGVV----YLH-GI--GITHRDIKPENLLLDERDNLKIS 146
Query: 225 DFGLAKLLG-SESSYITTRVMGTFGYVAPEYASTGMLN-ERSDVYSFGILIMEVISGRIP 282
DFGLA + + + ++ GT YVAPE + E DV+S GI++ +++G +P
Sbjct: 147 DFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
Query: 283 VD--------YSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRL 323
D YS E+ + KK+ + P +L L E P++R+
Sbjct: 207 WDQPSDSCQEYSDWKEKKTYLNPWKKI--DSAPLALLHKILVENPSARI 253
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 109/229 (47%), Gaps = 20/229 (8%)
Query: 106 VAVKNLLNNRG-QAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VAVK + R K E+ + H+N+V+ G+ EG + L EY + G L
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 94
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
+ D+G P ++ G YLH G+ + HRDIK N+L+D+ N K+S
Sbjct: 95 RIEPDIGMPEPDAQRFFHQLMAGVV----YLH-GI--GITHRDIKPENLLLDERDNLKIS 147
Query: 225 DFGLAKLLG-SESSYITTRVMGTFGYVAPEYASTGMLN-ERSDVYSFGILIMEVISGRIP 282
DFGLA + + + ++ GT YVAPE + E DV+S GI++ +++G +P
Sbjct: 148 DFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
Query: 283 VD--------YSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRL 323
D YS E+ + KK+ + P +L L E P++R+
Sbjct: 208 WDQPSDSCQEYSDWKEKKTYLNPWKKI--DSAPLALLHKILVENPSARI 254
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 109/229 (47%), Gaps = 20/229 (8%)
Query: 106 VAVKNLLNNRG-QAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VAVK + R K E+ + H+N+V+ G+ EG + L EY + G L
Sbjct: 33 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 92
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
+ D+G P ++ G YLH G+ + HRDIK N+L+D+ N K+S
Sbjct: 93 RIEPDIGMPEPDAQRFFHQLMAGVV----YLH-GI--GITHRDIKPENLLLDERDNLKIS 145
Query: 225 DFGLAKLLG-SESSYITTRVMGTFGYVAPEYASTGMLN-ERSDVYSFGILIMEVISGRIP 282
DFGLA + + + ++ GT YVAPE + E DV+S GI++ +++G +P
Sbjct: 146 DFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 205
Query: 283 VD--------YSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRL 323
D YS E+ + KK+ + P +L L E P++R+
Sbjct: 206 WDQPSDSCQEYSDWKEKKTYLNPWKKI--DSAPLALLHKILVENPSARI 252
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 109/229 (47%), Gaps = 20/229 (8%)
Query: 106 VAVKNLLNNRG-QAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VAVK + R K E+ + H+N+V+ G+ EG + L EY + G L
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
+ D+G P ++ G YLH G+ + HRDIK N+L+D+ N K+S
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMAGVV----YLH-GI--GITHRDIKPENLLLDERDNLKIS 146
Query: 225 DFGLAKLLG-SESSYITTRVMGTFGYVAPEYASTGMLN-ERSDVYSFGILIMEVISGRIP 282
DFGLA + + + ++ GT YVAPE + E DV+S GI++ +++G +P
Sbjct: 147 DFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
Query: 283 VD--------YSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRL 323
D YS E+ + KK+ + P +L L E P++R+
Sbjct: 207 WDQPSDSCQEYSDWKEKKTYLNPWKKI--DSAPLALLHKILVENPSARI 253
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 109/229 (47%), Gaps = 20/229 (8%)
Query: 106 VAVKNLLNNRG-QAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VAVK + R K E+ + H+N+V+ G+ EG + L EY + G L
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
+ D+G P ++ G YLH G+ + HRDIK N+L+D+ N K+S
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMAGVV----YLH-GI--GITHRDIKPENLLLDERDNLKIS 146
Query: 225 DFGLAKLLG-SESSYITTRVMGTFGYVAPEYASTGMLN-ERSDVYSFGILIMEVISGRIP 282
DFGLA + + + ++ GT YVAPE + E DV+S GI++ +++G +P
Sbjct: 147 DFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
Query: 283 VD--------YSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRL 323
D YS E+ + KK+ + P +L L E P++R+
Sbjct: 207 WDQPSDSCQEYSDWKEKKTYLNPWKKI--DSAPLALLHKILVENPSARI 253
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 109/229 (47%), Gaps = 20/229 (8%)
Query: 106 VAVKNLLNNRG-QAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VAVK + R K E+ + H+N+V+ G+ EG + L EY + G L
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 94
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
+ D+G P ++ G YLH G+ + HRDIK N+L+D+ N K+S
Sbjct: 95 RIEPDIGMPEPDAQRFFHQLMAGVV----YLH-GI--GITHRDIKPENLLLDERDNLKIS 147
Query: 225 DFGLAKLLG-SESSYITTRVMGTFGYVAPEYASTGMLN-ERSDVYSFGILIMEVISGRIP 282
DFGLA + + + ++ GT YVAPE + E DV+S GI++ +++G +P
Sbjct: 148 DFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
Query: 283 VD--------YSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRL 323
D YS E+ + KK+ + P +L L E P++R+
Sbjct: 208 WDQPSDSCQEYSDWKEKKTYLNPWKKI--DSAPLALLHKILVENPSARI 254
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 109/229 (47%), Gaps = 20/229 (8%)
Query: 106 VAVKNLLNNRG-QAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VAVK + R K E+ + H+N+V+ G+ EG + L EY + G L
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
+ D+G P ++ G YLH G+ + HRDIK N+L+D+ N K+S
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMAGVV----YLH-GI--GITHRDIKPENLLLDERDNLKIS 146
Query: 225 DFGLAKLLG-SESSYITTRVMGTFGYVAPEYASTGMLN-ERSDVYSFGILIMEVISGRIP 282
DFGLA + + + ++ GT YVAPE + E DV+S GI++ +++G +P
Sbjct: 147 DFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
Query: 283 VD--------YSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRL 323
D YS E+ + KK+ + P +L L E P++R+
Sbjct: 207 WDQPSDSCQEYSDWKEKKTYLNPWKKI--DSAPLALLHKILVENPSARI 253
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 100/228 (43%), Gaps = 14/228 (6%)
Query: 105 KVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
KV K L G E + + EVE +RH N++RL GY + L+ EY G
Sbjct: 41 KVLFKAQLEKAG-VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT--- 96
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
++ ++ S + I A LSY H +V+HRDIK N+L+ K++
Sbjct: 97 -VYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIA 152
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVD 284
DFG + S + GT Y+ PE M +E+ D++S G+L E + G+ P +
Sbjct: 153 DFGWSVHAPSSRR---XXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 209
Query: 285 ---YSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILL 329
Y + ++ +E+ ++ L P+ R + R +L
Sbjct: 210 ANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 257
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 109/229 (47%), Gaps = 20/229 (8%)
Query: 106 VAVKNLLNNRG-QAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VAVK + R K E+ + H+N+V+ G+ EG + L EY + G L
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
+ D+G P ++ G YLH G+ + HRDIK N+L+D+ N K+S
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMAGVV----YLH-GI--GITHRDIKPENLLLDERDNLKIS 146
Query: 225 DFGLAKLLG-SESSYITTRVMGTFGYVAPEYASTGMLN-ERSDVYSFGILIMEVISGRIP 282
DFGLA + + + ++ GT YVAPE + E DV+S GI++ +++G +P
Sbjct: 147 DFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
Query: 283 VD--------YSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRL 323
D YS E+ + KK+ + P +L L E P++R+
Sbjct: 207 WDQPSDSCQEYSDWKEKKTYLNPWKKI--DSAPLALLHKILVENPSARI 253
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 109/229 (47%), Gaps = 20/229 (8%)
Query: 106 VAVKNLLNNRG-QAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VAVK + R K E+ + H+N+V+ G+ EG + L EY + G L
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 94
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
+ D+G P ++ G YLH G+ + HRDIK N+L+D+ N K+S
Sbjct: 95 RIEPDIGMPEPDAQRFFHQLMAGVV----YLH-GI--GITHRDIKPENLLLDERDNLKIS 147
Query: 225 DFGLAKLLG-SESSYITTRVMGTFGYVAPEYASTGMLN-ERSDVYSFGILIMEVISGRIP 282
DFGLA + + + ++ GT YVAPE + E DV+S GI++ +++G +P
Sbjct: 148 DFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
Query: 283 VD--------YSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRL 323
D YS E+ + KK+ + P +L L E P++R+
Sbjct: 208 WDQPSDSCQEYSDWKEKKTYLNPWKKI--DSAPLALLHKILVENPSARI 254
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 109/229 (47%), Gaps = 20/229 (8%)
Query: 106 VAVKNLLNNRG-QAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VAVK + R K E+ + H+N+V+ G+ EG + L EY + G L
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 94
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
+ D+G P ++ G YLH G+ + HRDIK N+L+D+ N K+S
Sbjct: 95 RIEPDIGMPEPDAQRFFHQLMAGVV----YLH-GI--GITHRDIKPENLLLDERDNLKIS 147
Query: 225 DFGLAKLLG-SESSYITTRVMGTFGYVAPEYASTGMLN-ERSDVYSFGILIMEVISGRIP 282
DFGLA + + + ++ GT YVAPE + E DV+S GI++ +++G +P
Sbjct: 148 DFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
Query: 283 VD--------YSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRL 323
D YS E+ + KK+ + P +L L E P++R+
Sbjct: 208 WDQPSDSCQEYSDWKEKKTYLNPWKKI--DSAPLALLHKILVENPSARI 254
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 109/229 (47%), Gaps = 20/229 (8%)
Query: 106 VAVKNLLNNRG-QAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VAVK + R K E+ + H+N+V+ G+ EG + L EY + G L
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 94
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
+ D+G P ++ G YLH G+ + HRDIK N+L+D+ N K+S
Sbjct: 95 RIEPDIGMPEPDAQRFFHQLMAGVV----YLH-GI--GITHRDIKPENLLLDERDNLKIS 147
Query: 225 DFGLAKLLG-SESSYITTRVMGTFGYVAPEYASTGMLN-ERSDVYSFGILIMEVISGRIP 282
DFGLA + + + ++ GT YVAPE + E DV+S GI++ +++G +P
Sbjct: 148 DFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
Query: 283 VD--------YSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRL 323
D YS E+ + KK+ + P +L L E P++R+
Sbjct: 208 WDQPSDSCQEYSDWKEKKTYLNPWKKI--DSAPLALLHKILVENPSARI 254
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 103/228 (45%), Gaps = 14/228 (6%)
Query: 105 KVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
KV K L G E + + EVE +RH N++RL GY + L+ EY G
Sbjct: 65 KVLFKAQLEKAG-VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT--- 120
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
++ ++ S + I A LSY H +V+HRDIK N+L+ K++
Sbjct: 121 -VYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIA 176
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVD 284
DFG + + + SS + GT Y+ PE M +E+ D++S G+L E + G+ P +
Sbjct: 177 DFGWS--VHAPSSR-RDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 233
Query: 285 ---YSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILL 329
Y + ++ +E+ ++ L P+ R + R +L
Sbjct: 234 ANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 281
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 109/229 (47%), Gaps = 20/229 (8%)
Query: 106 VAVKNLLNNRG-QAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VAVK + R K E+ + H+N+V+ G+ EG + L EY + G L
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
+ D+G P ++ G YLH G+ + HRDIK N+L+D+ N K+S
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMAGVV----YLH-GI--GITHRDIKPENLLLDERDNLKIS 146
Query: 225 DFGLAKLLG-SESSYITTRVMGTFGYVAPEYASTGMLN-ERSDVYSFGILIMEVISGRIP 282
DFGLA + + + ++ GT YVAPE + E DV+S GI++ +++G +P
Sbjct: 147 DFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
Query: 283 VD--------YSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRL 323
D YS E+ + KK+ + P +L L E P++R+
Sbjct: 207 WDQPSDSCQEYSDWKEKKTYLNPWKKI--DSAPLALLHKILVENPSARI 253
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 109/229 (47%), Gaps = 20/229 (8%)
Query: 106 VAVKNLLNNRG-QAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VAVK + R K E+ + H+N+V+ G+ EG + L EY + G L
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
+ D+G P ++ G YLH G+ + HRDIK N+L+D+ N K+S
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMAGVV----YLH-GI--GITHRDIKPENLLLDERDNLKIS 146
Query: 225 DFGLAKLLG-SESSYITTRVMGTFGYVAPEYASTGMLN-ERSDVYSFGILIMEVISGRIP 282
DFGLA + + + ++ GT YVAPE + E DV+S GI++ +++G +P
Sbjct: 147 DFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
Query: 283 VD--------YSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRL 323
D YS E+ + KK+ + P +L L E P++R+
Sbjct: 207 WDQPSDSCQEYSDWKEKKTYLNPWKKI--DSAPLALLHKILVENPSARI 253
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 100/228 (43%), Gaps = 14/228 (6%)
Query: 105 KVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
KV K L G E + + EVE +RH N++RL GY + L+ EY G
Sbjct: 42 KVLFKAQLEKAG-VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT--- 97
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
++ ++ S + I A LSY H +V+HRDIK N+L+ K++
Sbjct: 98 -VYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIA 153
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVD 284
DFG + S + GT Y+ PE M +E+ D++S G+L E + G+ P +
Sbjct: 154 DFGWSVHAPSSRR---AALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
Query: 285 ---YSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILL 329
Y + ++ +E+ ++ L P+ R + R +L
Sbjct: 211 ANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 109/229 (47%), Gaps = 20/229 (8%)
Query: 106 VAVKNLLNNRG-QAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VAVK + R K E+ + H+N+V+ G+ EG + L EY + G L
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
+ D+G P ++ G YLH G+ + HRDIK N+L+D+ N K+S
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMAGVV----YLH-GI--GITHRDIKPENLLLDERDNLKIS 146
Query: 225 DFGLAKLLG-SESSYITTRVMGTFGYVAPEYASTGMLN-ERSDVYSFGILIMEVISGRIP 282
DFGLA + + + ++ GT YVAPE + E DV+S GI++ +++G +P
Sbjct: 147 DFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
Query: 283 VD--------YSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRL 323
D YS E+ + KK+ + P +L L E P++R+
Sbjct: 207 WDQPSDSXQEYSDWKEKKTYLNPWKKI--DSAPLALLHKILVENPSARI 253
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 125/262 (47%), Gaps = 32/262 (12%)
Query: 102 DNSKV--AVKNL--LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYC--AEGAHRMLVYE 155
D K+ AVK+L + + G+ +F E + H N++ LLG C +EG+ ++V
Sbjct: 53 DGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNVLSLLGICLRSEGS-PLVVLP 110
Query: 156 YVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILI 215
Y+ +G+L ++ + +P ++ + L AKG+ YL K VHRD+ + N ++
Sbjct: 111 YMKHGDLRNFIRNETH--NPTVKDL-IGFGLQVAKGMKYL---ASKKFVHRDLAARNCML 164
Query: 216 DKHWNPKVSDFGLAKLLGSESSYITTRVMGT---FGYVAPEYASTGMLNERSDVYSFGIL 272
D+ + KV+DFGLA+ + + Y G ++A E T +SDV+SFG+L
Sbjct: 165 DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVL 224
Query: 273 IMEVISGRIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVAL 332
+ E+++ P P +VN + ++ R +L P+ P V L
Sbjct: 225 LWELMTRGAP-----PYPDVNTFDITVYLLQGRR---LLQPEYCPDPLYE-------VML 269
Query: 333 RCVDPNAQKRPKMGHVVHMLEA 354
+C P A+ RP +V + A
Sbjct: 270 KCWHPKAEMRPSFSELVSRISA 291
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 125/262 (47%), Gaps = 32/262 (12%)
Query: 102 DNSKV--AVKNL--LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYC--AEGAHRMLVYE 155
D K+ AVK+L + + G+ +F E + H N++ LLG C +EG+ ++V
Sbjct: 54 DGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNVLSLLGICLRSEGS-PLVVLP 111
Query: 156 YVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILI 215
Y+ +G+L ++ + +P ++ + L AKG+ YL K VHRD+ + N ++
Sbjct: 112 YMKHGDLRNFIRNETH--NPTVKDL-IGFGLQVAKGMKYL---ASKKFVHRDLAARNCML 165
Query: 216 DKHWNPKVSDFGLAKLLGSESSYITTRVMGT---FGYVAPEYASTGMLNERSDVYSFGIL 272
D+ + KV+DFGLA+ + + Y G ++A E T +SDV+SFG+L
Sbjct: 166 DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVL 225
Query: 273 IMEVISGRIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVAL 332
+ E+++ P P +VN + ++ R +L P+ P V L
Sbjct: 226 LWELMTRGAP-----PYPDVNTFDITVYLLQGRR---LLQPEYCPDPLYE-------VML 270
Query: 333 RCVDPNAQKRPKMGHVVHMLEA 354
+C P A+ RP +V + A
Sbjct: 271 KCWHPKAEMRPSFSELVSRISA 292
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 125/262 (47%), Gaps = 32/262 (12%)
Query: 102 DNSKV--AVKNL--LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYC--AEGAHRMLVYE 155
D K+ AVK+L + + G+ +F E + H N++ LLG C +EG+ ++V
Sbjct: 50 DGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNVLSLLGICLRSEGS-PLVVLP 107
Query: 156 YVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILI 215
Y+ +G+L ++ + +P ++ + L AKG+ YL K VHRD+ + N ++
Sbjct: 108 YMKHGDLRNFIRNETH--NPTVKDL-IGFGLQVAKGMKYL---ASKKFVHRDLAARNCML 161
Query: 216 DKHWNPKVSDFGLAKLLGSESSYITTRVMGT---FGYVAPEYASTGMLNERSDVYSFGIL 272
D+ + KV+DFGLA+ + + Y G ++A E T +SDV+SFG+L
Sbjct: 162 DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVL 221
Query: 273 IMEVISGRIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVAL 332
+ E+++ P P +VN + ++ R +L P+ P V L
Sbjct: 222 LWELMTRGAP-----PYPDVNTFDITVYLLQGRR---LLQPEYCPDPLYE-------VML 266
Query: 333 RCVDPNAQKRPKMGHVVHMLEA 354
+C P A+ RP +V + A
Sbjct: 267 KCWHPKAEMRPSFSELVSRISA 288
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 125/262 (47%), Gaps = 32/262 (12%)
Query: 102 DNSKV--AVKNL--LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYC--AEGAHRMLVYE 155
D K+ AVK+L + + G+ +F E + H N++ LLG C +EG+ ++V
Sbjct: 55 DGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNVLSLLGICLRSEGS-PLVVLP 112
Query: 156 YVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILI 215
Y+ +G+L ++ + +P ++ + L AKG+ YL K VHRD+ + N ++
Sbjct: 113 YMKHGDLRNFIRNETH--NPTVKDL-IGFGLQVAKGMKYL---ASKKFVHRDLAARNCML 166
Query: 216 DKHWNPKVSDFGLAKLLGSESSYITTRVMGT---FGYVAPEYASTGMLNERSDVYSFGIL 272
D+ + KV+DFGLA+ + + Y G ++A E T +SDV+SFG+L
Sbjct: 167 DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVL 226
Query: 273 IMEVISGRIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVAL 332
+ E+++ P P +VN + ++ R +L P+ P V L
Sbjct: 227 LWELMTRGAP-----PYPDVNTFDITVYLLQGRR---LLQPEYCPDPLYE-------VML 271
Query: 333 RCVDPNAQKRPKMGHVVHMLEA 354
+C P A+ RP +V + A
Sbjct: 272 KCWHPKAEMRPSFSELVSRISA 293
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 121/246 (49%), Gaps = 32/246 (13%)
Query: 106 VAVKNLLNNRG-QAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K L G +A EF E + + H +LVRLLG C + LV + + +G L +
Sbjct: 47 VAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLE 105
Query: 165 WLH---GDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
++H ++G L W +++ AKG+ YL E ++VHRD+ + N+L+ +
Sbjct: 106 YVHEHKDNIGSQLLLNWCVQI------AKGMMYLEER---RLVHRDLAARNVLVKSPNHV 156
Query: 222 KVSDFGLAKLL-GSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
K++DFGLA+LL G E Y ++A E +SDV+S+G+ I E+++ G
Sbjct: 157 KITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFG 216
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNA 339
P D E +L+E +G +LP+ P + + +V ++C +A
Sbjct: 217 GKPYDGIPTREIPDLLE-----------KG---ERLPQPPICTI--DVYMVMVKCWMIDA 260
Query: 340 QKRPKM 345
RPK
Sbjct: 261 DSRPKF 266
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 125/262 (47%), Gaps = 32/262 (12%)
Query: 102 DNSKV--AVKNL--LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYC--AEGAHRMLVYE 155
D K+ AVK+L + + G+ +F E + H N++ LLG C +EG+ ++V
Sbjct: 55 DGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNVLSLLGICLRSEGS-PLVVLP 112
Query: 156 YVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILI 215
Y+ +G+L ++ + +P ++ + L AKG+ YL K VHRD+ + N ++
Sbjct: 113 YMKHGDLRNFIRNETH--NPTVKDL-IGFGLQVAKGMKYL---ASKKFVHRDLAARNCML 166
Query: 216 DKHWNPKVSDFGLAKLLGSESSYITTRVMGT---FGYVAPEYASTGMLNERSDVYSFGIL 272
D+ + KV+DFGLA+ + + Y G ++A E T +SDV+SFG+L
Sbjct: 167 DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVL 226
Query: 273 IMEVISGRIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVAL 332
+ E+++ P P +VN + ++ R +L P+ P V L
Sbjct: 227 LWELMTRGAP-----PYPDVNTFDITVYLLQGRR---LLQPEYCPDPLYE-------VML 271
Query: 333 RCVDPNAQKRPKMGHVVHMLEA 354
+C P A+ RP +V + A
Sbjct: 272 KCWHPKAEMRPSFSELVSRISA 293
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 95/189 (50%), Gaps = 15/189 (7%)
Query: 103 NSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRM-LVYEYVNNGN 161
+KVAVK + N+ + F E + ++RH NLV+LLG E + +V EY+ G+
Sbjct: 35 GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGS 92
Query: 162 LEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
L +L S L + + L + + YL EG VHRD+ + N+L+ +
Sbjct: 93 LVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYL-EG--NNFVHRDLAARNVLVSEDNVA 147
Query: 222 KVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GR 280
KVSDFGL K E+S + APE + +SDV+SFGIL+ E+ S GR
Sbjct: 148 KVSDFGLTK----EASSTQDTGKLPVKWTAPEALREAAFSTKSDVWSFGILLWEIYSFGR 203
Query: 281 IPVDYSRPP 289
+P Y R P
Sbjct: 204 VP--YPRIP 210
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 98/184 (53%), Gaps = 11/184 (5%)
Query: 102 DNSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+++KVAVK L + + F E + ++H LVRL ++ EY+ G+
Sbjct: 36 NSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGS 94
Query: 162 LEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
L +L D G L I + + A+G++Y+ +HRD++++N+L+ +
Sbjct: 95 LLDFLKSDEGGKVLLPKLIDFSAQI--AEGMAYIE---RKNYIHRDLRAANVLVSESLMC 149
Query: 222 KVSDFGLAKLLGSESSYITTRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS- 278
K++DFGLA+++ E + T R F + APE + G +SDV+SFGIL+ E+++
Sbjct: 150 KIADFGLARVI--EDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTY 207
Query: 279 GRIP 282
G+IP
Sbjct: 208 GKIP 211
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 100/228 (43%), Gaps = 14/228 (6%)
Query: 105 KVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
KV K L G E + + EVE +RH N++RL GY + L+ EY G
Sbjct: 39 KVLFKAQLEKAG-VEHQLRREVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGT--- 94
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
++ ++ S + I A LSY H KV+HRDIK N+L+ K++
Sbjct: 95 -VYRELQKLSKFDEQRTATYITELANALSYCHSK---KVIHRDIKPENLLLGSAGELKIA 150
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVD 284
DFG + S + GT Y+ PE M +E+ D++S G+L E + G+ P +
Sbjct: 151 DFGWSVHAPSSRR---AALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
Query: 285 ---YSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILL 329
Y + ++ +E+ ++ L P+ R + R +L
Sbjct: 208 ANTYQDTYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 100/228 (43%), Gaps = 14/228 (6%)
Query: 105 KVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
KV K L G E + + EVE +RH N++RL GY + L+ EY G
Sbjct: 39 KVLFKAQLEKAG-VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT--- 94
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
++ ++ S + I A LSY H +V+HRDIK N+L+ K++
Sbjct: 95 -VYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIA 150
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVD 284
DFG + S + GT Y+ PE M +E+ D++S G+L E + G+ P +
Sbjct: 151 DFGWSVHAPSSRR---XXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
Query: 285 ---YSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILL 329
Y + ++ +E+ ++ L P+ R + R +L
Sbjct: 208 ANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 100/228 (43%), Gaps = 14/228 (6%)
Query: 105 KVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
KV K L G E + + EVE +RH N++RL GY + L+ EY G
Sbjct: 39 KVLFKAQLEKAG-VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT--- 94
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
++ ++ S + I A LSY H +V+HRDIK N+L+ K++
Sbjct: 95 -VYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIA 150
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVD 284
DFG + S + GT Y+ PE M +E+ D++S G+L E + G+ P +
Sbjct: 151 DFGWSVHAPSSRR---AALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
Query: 285 ---YSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILL 329
Y + ++ +E+ ++ L P+ R + R +L
Sbjct: 208 ANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 100/228 (43%), Gaps = 14/228 (6%)
Query: 105 KVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
KV K L G E + + EVE +RH N++RL GY + L+ EY G
Sbjct: 42 KVLFKAQLEKAG-VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT--- 97
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
++ ++ S + I A LSY H +V+HRDIK N+L+ K++
Sbjct: 98 -VYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIA 153
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVD 284
DFG + S + GT Y+ PE M +E+ D++S G+L E + G+ P +
Sbjct: 154 DFGWSVHAPSSRR---XXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
Query: 285 ---YSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILL 329
Y + ++ +E+ ++ L P+ R + R +L
Sbjct: 211 ANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 125/262 (47%), Gaps = 32/262 (12%)
Query: 102 DNSKV--AVKNL--LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYC--AEGAHRMLVYE 155
D K+ AVK+L + + G+ +F E + H N++ LLG C +EG+ ++V
Sbjct: 52 DGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNVLSLLGICLRSEGS-PLVVLP 109
Query: 156 YVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILI 215
Y+ +G+L ++ + +P ++ + L AKG+ YL K VHRD+ + N ++
Sbjct: 110 YMKHGDLRNFIRNETH--NPTVKDL-IGFGLQVAKGMKYLAS---KKFVHRDLAARNCML 163
Query: 216 DKHWNPKVSDFGLAKLLGSESSYITTRVMGT---FGYVAPEYASTGMLNERSDVYSFGIL 272
D+ + KV+DFGLA+ + + Y G ++A E T +SDV+SFG+L
Sbjct: 164 DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVL 223
Query: 273 IMEVISGRIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVAL 332
+ E+++ P P +VN + ++ R +L P+ P V L
Sbjct: 224 LWELMTRGAP-----PYPDVNTFDITVYLLQGRR---LLQPEYCPDPLYE-------VML 268
Query: 333 RCVDPNAQKRPKMGHVVHMLEA 354
+C P A+ RP +V + A
Sbjct: 269 KCWHPKAEMRPSFSELVSRISA 290
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 125/262 (47%), Gaps = 32/262 (12%)
Query: 102 DNSKV--AVKNL--LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYC--AEGAHRMLVYE 155
D K+ AVK+L + + G+ +F E + H N++ LLG C +EG+ ++V
Sbjct: 74 DGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNVLSLLGICLRSEGS-PLVVLP 131
Query: 156 YVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILI 215
Y+ +G+L ++ + +P ++ + L AKG+ YL K VHRD+ + N ++
Sbjct: 132 YMKHGDLRNFIRNETH--NPTVKDL-IGFGLQVAKGMKYLAS---KKFVHRDLAARNCML 185
Query: 216 DKHWNPKVSDFGLAKLLGSESSYITTRVMGT---FGYVAPEYASTGMLNERSDVYSFGIL 272
D+ + KV+DFGLA+ + + Y G ++A E T +SDV+SFG+L
Sbjct: 186 DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVL 245
Query: 273 IMEVISGRIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVAL 332
+ E+++ P P +VN + ++ R +L P+ P V L
Sbjct: 246 LWELMTRGAP-----PYPDVNTFDITVYLLQGRR---LLQPEYCPDPLYE-------VML 290
Query: 333 RCVDPNAQKRPKMGHVVHMLEA 354
+C P A+ RP +V + A
Sbjct: 291 KCWHPKAEMRPSFSELVSRISA 312
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 125/262 (47%), Gaps = 32/262 (12%)
Query: 102 DNSKV--AVKNL--LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYC--AEGAHRMLVYE 155
D K+ AVK+L + + G+ +F E + H N++ LLG C +EG+ ++V
Sbjct: 47 DGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNVLSLLGICLRSEGS-PLVVLP 104
Query: 156 YVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILI 215
Y+ +G+L ++ + +P ++ + L AKG+ YL K VHRD+ + N ++
Sbjct: 105 YMKHGDLRNFIRNETH--NPTVKDL-IGFGLQVAKGMKYLAS---KKFVHRDLAARNCML 158
Query: 216 DKHWNPKVSDFGLAKLLGSESSYITTRVMGT---FGYVAPEYASTGMLNERSDVYSFGIL 272
D+ + KV+DFGLA+ + + Y G ++A E T +SDV+SFG+L
Sbjct: 159 DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVL 218
Query: 273 IMEVISGRIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVAL 332
+ E+++ P P +VN + ++ R +L P+ P V L
Sbjct: 219 LWELMTRGAP-----PYPDVNTFDITVYLLQGRR---LLQPEYCPDPLYE-------VML 263
Query: 333 RCVDPNAQKRPKMGHVVHMLEA 354
+C P A+ RP +V + A
Sbjct: 264 KCWHPKAEMRPSFSELVSRISA 285
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 122/256 (47%), Gaps = 30/256 (11%)
Query: 106 VAVKNL--LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYC--AEGAHRMLVYEYVNNGN 161
AVK+L + + G+ +F E + H N++ LLG C +EG+ ++V Y+ +G+
Sbjct: 79 CAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNVLSLLGICLRSEGS-PLVVLPYMKHGD 136
Query: 162 LEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
L ++ + +P ++ + L AKG+ YL K VHRD+ + N ++D+ +
Sbjct: 137 LRNFIRNETH--NPTVKDL-IGFGLQVAKGMKYLAS---KKFVHRDLAARNCMLDEKFTV 190
Query: 222 KVSDFGLAKLLGSESSYITTRVMGT---FGYVAPEYASTGMLNERSDVYSFGILIMEVIS 278
KV+DFGLA+ + + Y G ++A E T +SDV+SFG+L+ E+++
Sbjct: 191 KVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 250
Query: 279 GRIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPN 338
P P +VN + ++ R +L P+ P V L+C P
Sbjct: 251 RGAP-----PYPDVNTFDITVYLLQGRR---LLQPEYCPDPLYE-------VMLKCWHPK 295
Query: 339 AQKRPKMGHVVHMLEA 354
A+ RP +V + A
Sbjct: 296 AEMRPSFSELVSRISA 311
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 112/244 (45%), Gaps = 28/244 (11%)
Query: 105 KVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
++A+K + + + E+ ++HKN+V+ LG +E + E V G+L
Sbjct: 49 RIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSA 108
Query: 165 WLHGDVGPC--SPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP- 221
L GP + T IL +GL YLH+ ++VHRDIK N+LI+ +
Sbjct: 109 LLRSKWGPLKDNEQTIGFYTKQIL---EGLKYLHDN---QIVHRDIKGDNVLINTYSGVL 162
Query: 222 KVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTG--MLNERSDVYSFGILIMEVISG 279
K+SDFG +K L + T GT Y+APE G + +D++S G I+E+ +G
Sbjct: 163 KISDFGTSKRLAGINP-CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATG 221
Query: 280 RIPV-DYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPN 338
+ P + P + + K + P++PE ++ I L+C +P+
Sbjct: 222 KPPFYELGEPQAAMFKVGMFK-----------VHPEIPESMSAEAKAFI----LKCFEPD 266
Query: 339 AQKR 342
KR
Sbjct: 267 PDKR 270
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 119/246 (48%), Gaps = 32/246 (13%)
Query: 106 VAVKNLLNNRG-QAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K L G +A EF E + + H +LVRLLG C + LV + + +G L +
Sbjct: 70 VAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLE 128
Query: 165 WLH---GDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
++H ++G L W +++ AKG+ YL E ++VHRD+ + N+L+ +
Sbjct: 129 YVHEHKDNIGSQLLLNWCVQI------AKGMMYLEER---RLVHRDLAARNVLVKSPNHV 179
Query: 222 KVSDFGLAKLL-GSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
K++DFGLA+LL G E Y ++A E +SDV+S+G+ I E+++ G
Sbjct: 180 KITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFG 239
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNA 339
P D E +L+E +LP+ P + + +V ++C +A
Sbjct: 240 GKPYDGIPTREIPDLLE--------------KGERLPQPPICTI--DVYMVMVKCWMIDA 283
Query: 340 QKRPKM 345
RPK
Sbjct: 284 DSRPKF 289
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 100/221 (45%), Gaps = 17/221 (7%)
Query: 105 KVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
KV K L G E + + EVE +RH N++RL GY + L+ EY G
Sbjct: 43 KVLFKTQLEKAG-VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT--- 98
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
++ ++ S + I A LSY H +V+HRDIK N+L+ + K++
Sbjct: 99 -VYRELQKLSRFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSNGELKIA 154
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVD 284
DFG + + + SS T + GT Y+ PE M +E+ D++S G+L E + G P +
Sbjct: 155 DFGWS--VHAPSSRRDT-LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFE 211
Query: 285 YSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLK 325
E I ++ + EG D SRLLK
Sbjct: 212 AHTYQETYRRISRVEFTFPDFVTEGARD------LISRLLK 246
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 111/243 (45%), Gaps = 26/243 (10%)
Query: 105 KVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
++A+K + + + E+ ++HKN+V+ LG +E + E V G+L
Sbjct: 35 RIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSA 94
Query: 165 WLHGDVGPC--SPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP- 221
L GP + T IL +GL YLH+ ++VHRDIK N+LI+ +
Sbjct: 95 LLRSKWGPLKDNEQTIGFYTKQIL---EGLKYLHDN---QIVHRDIKGDNVLINTYSGVL 148
Query: 222 KVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTG--MLNERSDVYSFGILIMEVISG 279
K+SDFG +K L + T GT Y+APE G + +D++S G I+E+ +G
Sbjct: 149 KISDFGTSKRLAGINP-CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATG 207
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNA 339
+ P P+ + K + P++PE ++ I L+C +P+
Sbjct: 208 KPPFYELGEPQAAMFKVGMFK----------VHPEIPESMSAEAKAFI----LKCFEPDP 253
Query: 340 QKR 342
KR
Sbjct: 254 DKR 256
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 100/228 (43%), Gaps = 14/228 (6%)
Query: 105 KVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
KV K L G E + + EVE +RH N++RL GY + L+ EY G
Sbjct: 42 KVLFKAQLEKAG-VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT--- 97
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
++ ++ S + I A LSY H +V+HRDIK N+L+ K++
Sbjct: 98 -VYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIA 153
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVD 284
DFG + S + GT Y+ PE M +E+ D++S G+L E + G+ P +
Sbjct: 154 DFGWSVHAPSSRR---DDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
Query: 285 ---YSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILL 329
Y + ++ +E+ ++ L P+ R + R +L
Sbjct: 211 ANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 95/188 (50%), Gaps = 15/188 (7%)
Query: 104 SKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRM-LVYEYVNNGNL 162
+KVAVK + N+ + F E + ++RH NLV+LLG E + +V EY+ G+L
Sbjct: 30 NKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSL 87
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
+L S L + + L + + YL EG VHRD+ + N+L+ + K
Sbjct: 88 VDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYL-EG--NNFVHRDLAARNVLVSEDNVAK 142
Query: 223 VSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRI 281
VSDFGL K E+S + APE + +SDV+SFGIL+ E+ S GR+
Sbjct: 143 VSDFGLTK----EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRV 198
Query: 282 PVDYSRPP 289
P Y R P
Sbjct: 199 P--YPRIP 204
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 99/188 (52%), Gaps = 18/188 (9%)
Query: 106 VAVKNLLNNRGQAE-REFKVEVEAIGRV-RHKNLVRLLGYCAEGAHRMLVYEYVNNGNLE 163
VAVK L ++ + + + E+E + + +HKN++ LLG C + ++ EY + GNL
Sbjct: 116 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 175
Query: 164 QWLHG----------DVG--PCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSS 211
++L D+ P +T++ ++ A+G+ YL K +HRD+ +
Sbjct: 176 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAAR 232
Query: 212 NILIDKHWNPKVSDFGLAKLLGSESSY-ITTRVMGTFGYVAPEYASTGMLNERSDVYSFG 270
N+L+ ++ K++DFGLA+ + + Y TT ++APE + +SDV+SFG
Sbjct: 233 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 292
Query: 271 ILIMEVIS 278
+L+ E+ +
Sbjct: 293 VLMWEIFT 300
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 95/189 (50%), Gaps = 15/189 (7%)
Query: 103 NSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRM-LVYEYVNNGN 161
+KVAVK + N+ + F E + ++RH NLV+LLG E + +V EY+ G+
Sbjct: 44 GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGS 101
Query: 162 LEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
L +L S L + + L + + YL EG VHRD+ + N+L+ +
Sbjct: 102 LVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYL-EG--NNFVHRDLAARNVLVSEDNVA 156
Query: 222 KVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GR 280
KVSDFGL K E+S + APE + +SDV+SFGIL+ E+ S GR
Sbjct: 157 KVSDFGLTK----EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGR 212
Query: 281 IPVDYSRPP 289
+P Y R P
Sbjct: 213 VP--YPRIP 219
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 95/189 (50%), Gaps = 15/189 (7%)
Query: 103 NSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRM-LVYEYVNNGN 161
+KVAVK + N+ + F E + ++RH NLV+LLG E + +V EY+ G+
Sbjct: 216 GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGS 273
Query: 162 LEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
L +L S L + + L + + YL EG VHRD+ + N+L+ +
Sbjct: 274 LVDYLRSRGR--SVLGGDCLLKFSLDVCEAMEYL-EG--NNFVHRDLAARNVLVSEDNVA 328
Query: 222 KVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GR 280
KVSDFGL K E+S + APE + +SDV+SFGIL+ E+ S GR
Sbjct: 329 KVSDFGLTK----EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGR 384
Query: 281 IPVDYSRPP 289
+P Y R P
Sbjct: 385 VP--YPRIP 391
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 114/261 (43%), Gaps = 44/261 (16%)
Query: 106 VAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHR--MLVYEYVNNGNLE 163
VAVK L ++ + R+F+ E+E + ++H N+V+ G C R L+ EY+ G+L
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 101
Query: 164 QWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKV 223
+L + + KG+ YL + +HRD+ + NIL++ K+
Sbjct: 102 DYLQKHKERIDHIKL---LQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKI 155
Query: 224 SDFGLAKLLGSESSYITTRVMG---TFGYVAPEYASTGMLNERSDVYSFGILIMEVISGR 280
DFGL K+L + + + G F Y APE + + SDV+SFG+++ E+ +
Sbjct: 156 GDFGLTKVLPQDKEFFKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTY- 213
Query: 281 IPVDYSR-PPEE---------------VNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLL 324
++ S+ PP E +LIE LK P+G D
Sbjct: 214 --IEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPD------------ 259
Query: 325 KRILLVALRCVDPNAQKRPKM 345
I ++ C + N +RP
Sbjct: 260 -EIYMIMTECWNNNVNQRPSF 279
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 99/188 (52%), Gaps = 18/188 (9%)
Query: 106 VAVKNLLNNRGQAE-REFKVEVEAIGRV-RHKNLVRLLGYCAEGAHRMLVYEYVNNGNLE 163
VAVK L ++ + + + E+E + + +HKN++ LLG C + ++ EY + GNL
Sbjct: 57 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 116
Query: 164 QWLHG----------DVG--PCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSS 211
++L D+ P +T++ ++ A+G+ YL K +HRD+ +
Sbjct: 117 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLTAR 173
Query: 212 NILIDKHWNPKVSDFGLAKLLGSESSY-ITTRVMGTFGYVAPEYASTGMLNERSDVYSFG 270
N+L+ ++ K++DFGLA+ + + Y TT ++APE + +SDV+SFG
Sbjct: 174 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 233
Query: 271 ILIMEVIS 278
+L+ E+ +
Sbjct: 234 VLMWEIFT 241
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 99/188 (52%), Gaps = 18/188 (9%)
Query: 106 VAVKNLLNNRGQAE-REFKVEVEAIGRV-RHKNLVRLLGYCAEGAHRMLVYEYVNNGNLE 163
VAVK L ++ + + + E+E + + +HKN++ LLG C + ++ EY + GNL
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLR 129
Query: 164 QWLHG----------DVG--PCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSS 211
++L D+ P +T++ ++ A+G+ YL K +HRD+ +
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAAR 186
Query: 212 NILIDKHWNPKVSDFGLAKLLGSESSY-ITTRVMGTFGYVAPEYASTGMLNERSDVYSFG 270
N+L+ ++ K++DFGLA+ + + Y TT ++APE + +SDV+SFG
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 271 ILIMEVIS 278
+L+ E+ +
Sbjct: 247 VLMWEIFT 254
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 99/188 (52%), Gaps = 18/188 (9%)
Query: 106 VAVKNLLNNRGQAE-REFKVEVEAIGRV-RHKNLVRLLGYCAEGAHRMLVYEYVNNGNLE 163
VAVK L ++ + + + E+E + + +HKN++ LLG C + ++ EY + GNL
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 164 QWLHG----------DVG--PCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSS 211
++L D+ P +T++ ++ A+G+ YL K +HRD+ +
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAAR 186
Query: 212 NILIDKHWNPKVSDFGLAKLLGSESSYI-TTRVMGTFGYVAPEYASTGMLNERSDVYSFG 270
N+L+ ++ K++DFGLA+ + + Y TT ++APE + +SDV+SFG
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 271 ILIMEVIS 278
+L+ E+ +
Sbjct: 247 VLMWEIFT 254
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 124/284 (43%), Gaps = 47/284 (16%)
Query: 105 KVAVKNLLNNRGQAERE-FKVEVEAIGRV-RHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
+VAVK L +ERE E++ + ++ H+N+V LLG C L++EY G+L
Sbjct: 77 QVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDL 136
Query: 163 EQWLHGDVGPCSP-------------------LTWEIRMNIILGTAKGLSYLHEGLEPKV 203
+L S LT+E + AKG+ +L
Sbjct: 137 LNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---KSC 193
Query: 204 VHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGT----FGYVAPEYASTGM 259
VHRD+ + N+L+ K+ DFGLA+ + S+S+Y+ V G ++APE G+
Sbjct: 194 VHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYV---VRGNARLPVKWMAPESLFEGI 250
Query: 260 LNERSDVYSFGILIMEVIS-GRIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEK 318
+SDV+S+GIL+ E+ S G P Y P + N + ++ P
Sbjct: 251 YTIKSDVWSYGILLWEIFSLGVNP--YPGIPVDANFYKLIQNGFKMDQP----------- 297
Query: 319 PTSRLLKRILLVALRCVDPNAQKRPKMGHVVHMLEAQESPSKEP 362
+ I ++ C +++KRP ++ L Q + ++E
Sbjct: 298 --FYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAEEA 339
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 99/188 (52%), Gaps = 18/188 (9%)
Query: 106 VAVKNLLNNRGQAE-REFKVEVEAIGRV-RHKNLVRLLGYCAEGAHRMLVYEYVNNGNLE 163
VAVK L ++ + + + E+E + + +HKN++ LLG C + ++ EY + GNL
Sbjct: 62 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 121
Query: 164 QWLHG----------DVG--PCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSS 211
++L D+ P +T++ ++ A+G+ YL K +HRD+ +
Sbjct: 122 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAAR 178
Query: 212 NILIDKHWNPKVSDFGLAKLLGSESSY-ITTRVMGTFGYVAPEYASTGMLNERSDVYSFG 270
N+L+ ++ K++DFGLA+ + + Y TT ++APE + +SDV+SFG
Sbjct: 179 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 238
Query: 271 ILIMEVIS 278
+L+ E+ +
Sbjct: 239 VLMWEIFT 246
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 99/188 (52%), Gaps = 18/188 (9%)
Query: 106 VAVKNLLNNRGQAE-REFKVEVEAIGRV-RHKNLVRLLGYCAEGAHRMLVYEYVNNGNLE 163
VAVK L ++ + + + E+E + + +HKN++ LLG C + ++ EY + GNL
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLR 129
Query: 164 QWLHG----------DVG--PCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSS 211
++L D+ P +T++ ++ A+G+ YL K +HRD+ +
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAAR 186
Query: 212 NILIDKHWNPKVSDFGLAKLLGSESSY-ITTRVMGTFGYVAPEYASTGMLNERSDVYSFG 270
N+L+ ++ K++DFGLA+ + + Y TT ++APE + +SDV+SFG
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 271 ILIMEVIS 278
+L+ E+ +
Sbjct: 247 VLMWEIFT 254
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 99/188 (52%), Gaps = 18/188 (9%)
Query: 106 VAVKNLLNNRGQAE-REFKVEVEAIGRV-RHKNLVRLLGYCAEGAHRMLVYEYVNNGNLE 163
VAVK L ++ + + + E+E + + +HKN++ LLG C + ++ EY + GNL
Sbjct: 70 VAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 164 QWLHG----------DVG--PCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSS 211
++L D+ P +T++ ++ A+G+ YL K +HRD+ +
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAAR 186
Query: 212 NILIDKHWNPKVSDFGLAKLLGSESSY-ITTRVMGTFGYVAPEYASTGMLNERSDVYSFG 270
N+L+ ++ K++DFGLA+ + + Y TT ++APE + +SDV+SFG
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 271 ILIMEVIS 278
+L+ E+ +
Sbjct: 247 VLMWEIFT 254
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 99/188 (52%), Gaps = 18/188 (9%)
Query: 106 VAVKNLLNNRGQAE-REFKVEVEAIGRV-RHKNLVRLLGYCAEGAHRMLVYEYVNNGNLE 163
VAVK L ++ + + + E+E + + +HKN++ LLG C + ++ EY + GNL
Sbjct: 59 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 118
Query: 164 QWLHG----------DVG--PCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSS 211
++L D+ P +T++ ++ A+G+ YL K +HRD+ +
Sbjct: 119 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAAR 175
Query: 212 NILIDKHWNPKVSDFGLAKLLGSESSY-ITTRVMGTFGYVAPEYASTGMLNERSDVYSFG 270
N+L+ ++ K++DFGLA+ + + Y TT ++APE + +SDV+SFG
Sbjct: 176 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 235
Query: 271 ILIMEVIS 278
+L+ E+ +
Sbjct: 236 VLMWEIFT 243
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 113/261 (43%), Gaps = 44/261 (16%)
Query: 106 VAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHR--MLVYEYVNNGNLE 163
VAVK L ++ + R+F+ E+E + ++H N+V+ G C R L+ EY+ G+L
Sbjct: 45 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 104
Query: 164 QWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKV 223
+L + + KG+ YL + +HRD+ + NIL++ K+
Sbjct: 105 DYLQAHAERIDHIKL---LQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKI 158
Query: 224 SDFGLAKLLGSESSYITTRVMG---TFGYVAPEYASTGMLNERSDVYSFGILIMEVISGR 280
DFGL K+L + + G F Y APE + + SDV+SFG+++ E+ +
Sbjct: 159 GDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTY- 216
Query: 281 IPVDYSR-PPEE---------------VNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLL 324
++ S+ PP E +LIE LK P+G D
Sbjct: 217 --IEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPD------------ 262
Query: 325 KRILLVALRCVDPNAQKRPKM 345
I ++ C + N +RP
Sbjct: 263 -EIYMIMTECWNNNVNQRPSF 282
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 120/266 (45%), Gaps = 31/266 (11%)
Query: 102 DNSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
D VAVK L + A ++F+ E E + ++H+++V+ G C +G ++V+EY+ +G+
Sbjct: 44 DKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGD 103
Query: 162 LEQWL--HG-------DVGPCSP---LTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIK 209
L ++L HG D P L ++I A G+ YL VHRD+
Sbjct: 104 LNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYL---ASQHFVHRDLA 160
Query: 210 SSNILIDKHWNPKVSDFGLAKLLGSESSY-ITTRVMGTFGYVAPEYASTGMLNERSDVYS 268
+ N L+ + K+ DFG+++ + S Y + M ++ PE SDV+S
Sbjct: 161 TRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWS 220
Query: 269 FGILIMEVISGRIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRIL 328
FG+++ E+ + Y + P W ++ E + ++ E+P K +
Sbjct: 221 FGVILWEIFT------YGKQP-------WF-QLSNTEVIECITQGRVLERPRV-CPKEVY 265
Query: 329 LVALRCVDPNAQKRPKMGHVVHMLEA 354
V L C Q+R + + +L A
Sbjct: 266 DVMLGCWQREPQQRLNIKEIYKILHA 291
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 123/255 (48%), Gaps = 30/255 (11%)
Query: 107 AVKNL--LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYC--AEGAHRMLVYEYVNNGNL 162
AVK+L + + G+ +F E + H N++ LLG C +EG+ ++V Y+ +G+L
Sbjct: 63 AVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNVLSLLGICLRSEGS-PLVVLPYMKHGDL 120
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
++ + +P ++ + L AKG+ +L K VHRD+ + N ++D+ + K
Sbjct: 121 RNFIRNETH--NPTVKDL-IGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVK 174
Query: 223 VSDFGLAK-LLGSESSYITTRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVISG 279
V+DFGLA+ +L E + + ++A E T +SDV+SFG+L+ E+++
Sbjct: 175 VADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR 234
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNA 339
P P +VN + ++ R +L P+ P V L+C P A
Sbjct: 235 GAP-----PYPDVNTFDITVYLLQGRR---LLQPEYCPDPLYE-------VMLKCWHPKA 279
Query: 340 QKRPKMGHVVHMLEA 354
+ RP +V + A
Sbjct: 280 EMRPSFSELVSRISA 294
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 99/188 (52%), Gaps = 18/188 (9%)
Query: 106 VAVKNLLNNRGQAE-REFKVEVEAIGRV-RHKNLVRLLGYCAEGAHRMLVYEYVNNGNLE 163
VAVK L ++ + + + E+E + + +HKN++ LLG C + ++ EY + GNL
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 164 QWLHG----------DVG--PCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSS 211
++L D+ P +T++ ++ A+G+ YL K +HRD+ +
Sbjct: 130 EYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAAR 186
Query: 212 NILIDKHWNPKVSDFGLAKLLGS-ESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFG 270
N+L+ ++ K++DFGLA+ + + + TT ++APE + +SDV+SFG
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 271 ILIMEVIS 278
+L+ E+ +
Sbjct: 247 VLMWEIFT 254
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 114/261 (43%), Gaps = 44/261 (16%)
Query: 106 VAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHR--MLVYEYVNNGNLE 163
VAVK L ++ + R+F+ E+E + ++H N+V+ G C R L+ EY+ G+L
Sbjct: 43 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 102
Query: 164 QWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKV 223
+L + + KG+ YL + +HR++ + NIL++ K+
Sbjct: 103 DYLQKHKERIDHIKL---LQYTSQICKGMEYLGT---KRYIHRNLATRNILVENENRVKI 156
Query: 224 SDFGLAKLLGSESSYITTRVMG---TFGYVAPEYASTGMLNERSDVYSFGILIMEVISGR 280
DFGL K+L + Y + G F Y APE + + SDV+SFG+++ E+ +
Sbjct: 157 GDFGLTKVLPQDKEYYKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTY- 214
Query: 281 IPVDYSR-PPEE---------------VNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLL 324
++ S+ PP E +LIE LK P+G D
Sbjct: 215 --IEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPD------------ 260
Query: 325 KRILLVALRCVDPNAQKRPKM 345
I ++ C + N +RP
Sbjct: 261 -EIYMIMTECWNNNVNQRPSF 280
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 99/188 (52%), Gaps = 18/188 (9%)
Query: 106 VAVKNLLNNRGQAE-REFKVEVEAIGRV-RHKNLVRLLGYCAEGAHRMLVYEYVNNGNLE 163
VAVK L ++ + + + E+E + + +HKN++ LLG C + ++ EY + GNL
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 164 QWLHG----------DVG--PCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSS 211
++L D+ P +T++ ++ A+G+ YL K +HRD+ +
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAAR 186
Query: 212 NILIDKHWNPKVSDFGLAKLLGS-ESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFG 270
N+L+ ++ K++DFGLA+ + + + TT ++APE + +SDV+SFG
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 271 ILIMEVIS 278
+L+ E+ +
Sbjct: 247 VLMWEIFT 254
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 99/188 (52%), Gaps = 18/188 (9%)
Query: 106 VAVKNLLNNRGQAE-REFKVEVEAIGRV-RHKNLVRLLGYCAEGAHRMLVYEYVNNGNLE 163
VAVK L ++ + + + E+E + + +HKN++ LLG C + ++ EY + GNL
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 164 QWLHG----------DVG--PCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSS 211
++L D+ P +T++ ++ A+G+ YL K +HRD+ +
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAAR 186
Query: 212 NILIDKHWNPKVSDFGLAKLLGSESSY-ITTRVMGTFGYVAPEYASTGMLNERSDVYSFG 270
N+L+ ++ +++DFGLA+ + + Y TT ++APE + +SDV+SFG
Sbjct: 187 NVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 271 ILIMEVIS 278
+L+ E+ +
Sbjct: 247 VLMWEIFT 254
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 126/262 (48%), Gaps = 32/262 (12%)
Query: 102 DNSKV--AVKNL--LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYC--AEGAHRMLVYE 155
D K+ AVK+L + + G+ +F E + H N++ LLG C +EG+ ++V
Sbjct: 54 DGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNVLSLLGICLRSEGS-PLVVLP 111
Query: 156 YVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILI 215
Y+ +G+L ++ + +P ++ + L AKG+ YL K VHRD+ + N ++
Sbjct: 112 YMKHGDLRNFIRNETH--NPTVKDL-IGFGLQVAKGMKYLAS---KKFVHRDLAARNCML 165
Query: 216 DKHWNPKVSDFGLAKLLGSE---SSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGIL 272
D+ + KV+DFGLA+ + + S + T ++A E T +SDV+SFG+L
Sbjct: 166 DEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVL 225
Query: 273 IMEVISGRIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVAL 332
+ E+++ P P +VN + ++ R +L P+ P V L
Sbjct: 226 LWELMTRGAP-----PYPDVNTFDITVYLLQGRR---LLQPEYCPDPLYE-------VML 270
Query: 333 RCVDPNAQKRPKMGHVVHMLEA 354
+C P A+ RP +V + A
Sbjct: 271 KCWHPKAEMRPSFSELVSRISA 292
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 124/256 (48%), Gaps = 28/256 (10%)
Query: 106 VAVK--NLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLE 163
VAVK N+ Q + FK EV + + RH N++ +GY + +V ++ +L
Sbjct: 61 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLY 119
Query: 164 QWLHGDVGPCSPLTWEI--RMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
LH +E+ ++I TA+G+ YLH ++HRD+KS+NI + +
Sbjct: 120 HHLH-----IIETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTV 171
Query: 222 KVSDFGLAKLLGSES-SYITTRVMGTFGYVAPEYASTGMLNE---RSDVYSFGILIMEVI 277
K+ DFGLA + S S+ ++ G+ ++APE N +SDVY+FGI++ E++
Sbjct: 172 KIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELM 231
Query: 278 SGRIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDP 337
+G++P YS +N + + MV G L P L K S K + + C+
Sbjct: 232 TGQLP--YS----NINNRDQIIFMVG----RGYLSPDL-SKVRSNCPKAMKRLMAECLKK 280
Query: 338 NAQKRPKMGHVVHMLE 353
+RP ++ +E
Sbjct: 281 KRDERPLFPQILASIE 296
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 122/256 (47%), Gaps = 28/256 (10%)
Query: 106 VAVK--NLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLE 163
VAVK N+ Q + FK EV + + RH N++ +GY + +V ++ +L
Sbjct: 38 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLY 96
Query: 164 QWLHGDVGPCSPLTWEI--RMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
LH +E+ ++I TA+G+ YLH ++HRD+KS+NI + +
Sbjct: 97 HHLH-----IIETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTV 148
Query: 222 KVSDFGLAKLLGSES-SYITTRVMGTFGYVAPEYASTGMLNE---RSDVYSFGILIMEVI 277
K+ DFGLA + S S+ ++ G+ ++APE N +SDVY+FGI++ E++
Sbjct: 149 KIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELM 208
Query: 278 SGRIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDP 337
+G++P YS +I + + G L P L K S K + + C+
Sbjct: 209 TGQLP--YSNINNRDQIIFMVGR--------GYLSPDL-SKVRSNCPKAMKRLMAECLKK 257
Query: 338 NAQKRPKMGHVVHMLE 353
+RP ++ +E
Sbjct: 258 KRDERPLFPQILASIE 273
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 99/184 (53%), Gaps = 11/184 (5%)
Query: 102 DNSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+++KVAVK L + + F E + ++H LVRL + ++ E++ G+
Sbjct: 35 NSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGS 93
Query: 162 LEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
L +L D G L I + + A+G++Y+ +HRD++++N+L+ +
Sbjct: 94 LLDFLKSDEGGKVLLPKLIDFSAQI--AEGMAYIE---RKNYIHRDLRAANVLVSESLMC 148
Query: 222 KVSDFGLAKLLGSESSYITTRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS- 278
K++DFGLA+++ E + T R F + APE + G +S+V+SFGIL+ E+++
Sbjct: 149 KIADFGLARVI--EDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNVWSFGILLYEIVTY 206
Query: 279 GRIP 282
G+IP
Sbjct: 207 GKIP 210
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 122/256 (47%), Gaps = 28/256 (10%)
Query: 106 VAVK--NLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLE 163
VAVK N+ Q + FK EV + + RH N++ +GY + +V ++ +L
Sbjct: 60 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLY 118
Query: 164 QWLHGDVGPCSPLTWEI--RMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
LH +E+ ++I TA+G+ YLH ++HRD+KS+NI + +
Sbjct: 119 HHLH-----IIETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTV 170
Query: 222 KVSDFGLAKLLGSES-SYITTRVMGTFGYVAPEYASTGMLNE---RSDVYSFGILIMEVI 277
K+ DFGLA + S S+ ++ G+ ++APE N +SDVY+FGI++ E++
Sbjct: 171 KIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELM 230
Query: 278 SGRIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDP 337
+G++P YS +I + + G L P L K S K + + C+
Sbjct: 231 TGQLP--YSNINNRDQIIFMVGR--------GYLSPDL-SKVRSNCPKAMKRLMAECLKK 279
Query: 338 NAQKRPKMGHVVHMLE 353
+RP ++ +E
Sbjct: 280 KRDERPLFPQILASIE 295
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 97/190 (51%), Gaps = 18/190 (9%)
Query: 104 SKVAVKNLLNNRGQAE-REFKVEVEAIGRV-RHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+KVAVK L ++ + + + E+E + + +HKN++ LLG C + ++ EY + GN
Sbjct: 46 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 105
Query: 162 LEQWLHGDVGP----C--------SPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIK 209
L ++L P C L+ + ++ A+G+ YL K +HRD+
Sbjct: 106 LREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLA 162
Query: 210 SSNILIDKHWNPKVSDFGLAKLLGSESSY-ITTRVMGTFGYVAPEYASTGMLNERSDVYS 268
+ N+L+ + K++DFGLA+ + Y TT ++APE + +SDV+S
Sbjct: 163 ARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWS 222
Query: 269 FGILIMEVIS 278
FG+L+ E+ +
Sbjct: 223 FGVLLWEIFT 232
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 122/256 (47%), Gaps = 28/256 (10%)
Query: 106 VAVK--NLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLE 163
VAVK N+ Q + FK EV + + RH N++ +GY + +V ++ +L
Sbjct: 38 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLY 96
Query: 164 QWLHGDVGPCSPLTWEI--RMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
LH +E+ ++I TA+G+ YLH ++HRD+KS+NI + +
Sbjct: 97 HHLH-----IIETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTV 148
Query: 222 KVSDFGLAKLLGSES-SYITTRVMGTFGYVAPEYASTGMLNE---RSDVYSFGILIMEVI 277
K+ DFGLA + S S+ ++ G+ ++APE N +SDVY+FGI++ E++
Sbjct: 149 KIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELM 208
Query: 278 SGRIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDP 337
+G++P YS +I + + G L P L K S K + + C+
Sbjct: 209 TGQLP--YSNINNRDQIIFMVGR--------GYLSPDL-SKVRSNCPKAMKRLMAECLKK 257
Query: 338 NAQKRPKMGHVVHMLE 353
+RP ++ +E
Sbjct: 258 KRDERPLFPQILASIE 273
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 122/256 (47%), Gaps = 28/256 (10%)
Query: 106 VAVK--NLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLE 163
VAVK N+ Q + FK EV + + RH N++ +GY + +V ++ +L
Sbjct: 33 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-STAPQLAIVTQWCEGSSLY 91
Query: 164 QWLHGDVGPCSPLTWEI--RMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
LH +E+ ++I TA+G+ YLH ++HRD+KS+NI + +
Sbjct: 92 HHLH-----IIETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTV 143
Query: 222 KVSDFGLAKLLGSES-SYITTRVMGTFGYVAPEYASTGMLNE---RSDVYSFGILIMEVI 277
K+ DFGLA + S S+ ++ G+ ++APE N +SDVY+FGI++ E++
Sbjct: 144 KIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELM 203
Query: 278 SGRIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDP 337
+G++P YS +I + + G L P L K S K + + C+
Sbjct: 204 TGQLP--YSNINNRDQIIFMVGR--------GYLSPDL-SKVRSNCPKAMKRLMAECLKK 252
Query: 338 NAQKRPKMGHVVHMLE 353
+RP ++ +E
Sbjct: 253 KRDERPLFPQILASIE 268
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 122/256 (47%), Gaps = 28/256 (10%)
Query: 106 VAVK--NLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLE 163
VAVK N+ Q + FK EV + + RH N++ +GY + +V ++ +L
Sbjct: 33 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLY 91
Query: 164 QWLHGDVGPCSPLTWEI--RMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
LH +E+ ++I TA+G+ YLH ++HRD+KS+NI + +
Sbjct: 92 HHLH-----IIETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTV 143
Query: 222 KVSDFGLAKLLGSES-SYITTRVMGTFGYVAPEYASTGMLNE---RSDVYSFGILIMEVI 277
K+ DFGLA + S S+ ++ G+ ++APE N +SDVY+FGI++ E++
Sbjct: 144 KIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELM 203
Query: 278 SGRIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDP 337
+G++P YS +I + + G L P L K S K + + C+
Sbjct: 204 TGQLP--YSNINNRDQIIFMVGR--------GYLSPDL-SKVRSNCPKAMKRLMAECLKK 252
Query: 338 NAQKRPKMGHVVHMLE 353
+RP ++ +E
Sbjct: 253 KRDERPLFPQILASIE 268
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 122/256 (47%), Gaps = 28/256 (10%)
Query: 106 VAVK--NLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLE 163
VAVK N+ Q + FK EV + + RH N++ +GY + +V ++ +L
Sbjct: 35 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLY 93
Query: 164 QWLHGDVGPCSPLTWEI--RMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
LH +E+ ++I TA+G+ YLH ++HRD+KS+NI + +
Sbjct: 94 HHLH-----IIETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTV 145
Query: 222 KVSDFGLAKLLGSES-SYITTRVMGTFGYVAPEYASTGMLNE---RSDVYSFGILIMEVI 277
K+ DFGLA + S S+ ++ G+ ++APE N +SDVY+FGI++ E++
Sbjct: 146 KIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELM 205
Query: 278 SGRIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDP 337
+G++P YS +I + + G L P L K S K + + C+
Sbjct: 206 TGQLP--YSNINNRDQIIFMVGR--------GYLSPDL-SKVRSNCPKAMKRLMAECLKK 254
Query: 338 NAQKRPKMGHVVHMLE 353
+RP ++ +E
Sbjct: 255 KRDERPLFPQILASIE 270
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 102/206 (49%), Gaps = 19/206 (9%)
Query: 106 VAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRM---LVYEYVNNGNL 162
VAVK L ++ +R+F+ E++ + + +V+ G + G R LV EY+ +G L
Sbjct: 42 VAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGV-SYGPGRQSLRLVMEYLPSGCL 100
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
+L + + I KG+ YL + VHRD+ + NIL++ + K
Sbjct: 101 RDFLQRHRARLDASRLLLYSSQI---CKGMEYLGSR---RCVHRDLAARNILVESEAHVK 154
Query: 223 VSDFGLAKLLGSESSYITTRVMGT--FGYVAPEYASTGMLNERSDVYSFGILIMEVISGR 280
++DFGLAKLL + Y R G + APE S + + +SDV+SFG+++ E+ +
Sbjct: 155 IADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTY- 213
Query: 281 IPVDYSRPPEEVNLIEWLKKMVTNRN 306
D S P E+L+ M + R+
Sbjct: 214 --CDKSCSPSA----EFLRMMGSERD 233
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 92/182 (50%), Gaps = 12/182 (6%)
Query: 105 KVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
K+ K + G +R + EV+ +++H +++ L Y + + LV E +NG + +
Sbjct: 42 KMIDKKAMYKAGMVQR-VQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNR 100
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
+L V P S M+ I+ G+ YLH ++HRD+ SN+L+ ++ N K++
Sbjct: 101 YLKNRVKPFSENEARHFMHQII---TGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIA 154
Query: 225 DFGLAKLLG--SESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIP 282
DFGLA L E Y + GT Y++PE A+ SDV+S G + ++ GR P
Sbjct: 155 DFGLATQLKMPHEKHYT---LCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPP 211
Query: 283 VD 284
D
Sbjct: 212 FD 213
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 63/108 (58%), Gaps = 8/108 (7%)
Query: 179 EIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSY 238
EI I L T K L++L E L K++HRDIK SNIL+D+ N K+ DFG++ L S
Sbjct: 125 EILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQL--VDSI 180
Query: 239 ITTRVMGTFGYVAPE----YASTGMLNERSDVYSFGILIMEVISGRIP 282
TR G Y+APE AS + RSDV+S GI + E+ +GR P
Sbjct: 181 AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFP 228
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 98/198 (49%), Gaps = 27/198 (13%)
Query: 104 SKVAVKNLLNNRGQAE-REFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
+ VAVK L N +E R+ E + +V H ++++L G C++ +L+ EY G+L
Sbjct: 54 TTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSL 113
Query: 163 EQWLHGD--VGPC------------------SPLTWEIRMNIILGTAKGLSYLHEGLEPK 202
+L VGP LT ++ ++G+ YL E K
Sbjct: 114 RGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---K 170
Query: 203 VVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTF--GYVAPEYASTGML 260
+VHRD+ + NIL+ + K+SDFGL++ + E SY+ R G ++A E +
Sbjct: 171 LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYV-KRSQGRIPVKWMAIESLFDHIY 229
Query: 261 NERSDVYSFGILIMEVIS 278
+SDV+SFG+L+ E+++
Sbjct: 230 TTQSDVWSFGVLLWEIVT 247
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 97/190 (51%), Gaps = 18/190 (9%)
Query: 104 SKVAVKNLLNNRGQAE-REFKVEVEAIGRV-RHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+KVAVK L ++ + + + E+E + + +HKN++ LLG C + ++ EY + GN
Sbjct: 61 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 120
Query: 162 LEQWLHGDVGP----C--------SPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIK 209
L ++L P C L+ + ++ A+G+ YL K +HRD+
Sbjct: 121 LREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLA 177
Query: 210 SSNILIDKHWNPKVSDFGLAKLLGSESSY-ITTRVMGTFGYVAPEYASTGMLNERSDVYS 268
+ N+L+ + K++DFGLA+ + Y TT ++APE + +SDV+S
Sbjct: 178 ARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWS 237
Query: 269 FGILIMEVIS 278
FG+L+ E+ +
Sbjct: 238 FGVLLWEIFT 247
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 113/261 (43%), Gaps = 44/261 (16%)
Query: 106 VAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHR--MLVYEYVNNGNLE 163
VAVK L ++ + R+F+ E+E + ++H N+V+ G C R L+ EY+ G+L
Sbjct: 41 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 100
Query: 164 QWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKV 223
+L + + KG+ YL + +HRD+ + NIL++ K+
Sbjct: 101 DYLQKHKERIDHIKL---LQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKI 154
Query: 224 SDFGLAKLLGSESSYITTRVMG---TFGYVAPEYASTGMLNERSDVYSFGILIMEVISGR 280
DFGL K+L + + G F Y APE + + SDV+SFG+++ E+ +
Sbjct: 155 GDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTY- 212
Query: 281 IPVDYSR-PPEE---------------VNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLL 324
++ S+ PP E +LIE LK P+G D
Sbjct: 213 --IEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPD------------ 258
Query: 325 KRILLVALRCVDPNAQKRPKM 345
I ++ C + N +RP
Sbjct: 259 -EIYMIMTECWNNNVNQRPSF 278
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 98/188 (52%), Gaps = 18/188 (9%)
Query: 106 VAVKNLLNNRGQAE-REFKVEVEAIGRV-RHKNLVRLLGYCAEGAHRMLVYEYVNNGNLE 163
VAVK L ++ + + + E+E + + +HKN++ LLG C + ++ Y + GNL
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLR 129
Query: 164 QWLHG----------DVG--PCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSS 211
++L D+ P +T++ ++ A+G+ YL K +HRD+ +
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAAR 186
Query: 212 NILIDKHWNPKVSDFGLAKLLGSESSY-ITTRVMGTFGYVAPEYASTGMLNERSDVYSFG 270
N+L+ ++ K++DFGLA+ + + Y TT ++APE + +SDV+SFG
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 271 ILIMEVIS 278
+L+ E+ +
Sbjct: 247 VLMWEIFT 254
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 126/262 (48%), Gaps = 32/262 (12%)
Query: 102 DNSKV--AVKNL--LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYC--AEGAHRMLVYE 155
D K+ AVK+L + + G+ +F E + H N++ LLG C +EG+ ++V
Sbjct: 55 DGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNVLSLLGICLRSEGS-PLVVLP 112
Query: 156 YVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILI 215
Y+ +G+L ++ + +P ++ + L AKG+ +L K VHRD+ + N ++
Sbjct: 113 YMKHGDLRNFIRNETH--NPTVKDL-IGFGLQVAKGMKFL---ASKKFVHRDLAARNCML 166
Query: 216 DKHWNPKVSDFGLAKLLGS---ESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGIL 272
D+ + KV+DFGLA+ + +S + T ++A E T +SDV+SFG+L
Sbjct: 167 DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVL 226
Query: 273 IMEVISGRIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVAL 332
+ E+++ P P +VN + ++ R +L P+ P V L
Sbjct: 227 LWELMTRGAP-----PYPDVNTFDITVYLLQGRR---LLQPEYCPDPLYE-------VML 271
Query: 333 RCVDPNAQKRPKMGHVVHMLEA 354
+C P A+ RP +V + A
Sbjct: 272 KCWHPKAEMRPSFSELVSRISA 293
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 113/261 (43%), Gaps = 44/261 (16%)
Query: 106 VAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHR--MLVYEYVNNGNLE 163
VAVK L ++ + R+F+ E+E + ++H N+V+ G C R L+ EY+ G+L
Sbjct: 45 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 104
Query: 164 QWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKV 223
+L + + KG+ YL + +HRD+ + NIL++ K+
Sbjct: 105 DYLQKHKERIDHIKL---LQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKI 158
Query: 224 SDFGLAKLLGSESSYITTRVMG---TFGYVAPEYASTGMLNERSDVYSFGILIMEVISGR 280
DFGL K+L + + G F Y APE + + SDV+SFG+++ E+ +
Sbjct: 159 GDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTY- 216
Query: 281 IPVDYSR-PPEE---------------VNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLL 324
++ S+ PP E +LIE LK P+G D
Sbjct: 217 --IEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPD------------ 262
Query: 325 KRILLVALRCVDPNAQKRPKM 345
I ++ C + N +RP
Sbjct: 263 -EIYMIMTECWNNNVNQRPSF 282
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 113/261 (43%), Gaps = 44/261 (16%)
Query: 106 VAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHR--MLVYEYVNNGNLE 163
VAVK L ++ + R+F+ E+E + ++H N+V+ G C R L+ EY+ G+L
Sbjct: 73 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 132
Query: 164 QWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKV 223
+L + + KG+ YL + +HRD+ + NIL++ K+
Sbjct: 133 DYLQKHKERIDHIKL---LQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKI 186
Query: 224 SDFGLAKLLGSESSYITTRVMG---TFGYVAPEYASTGMLNERSDVYSFGILIMEVISGR 280
DFGL K+L + + G F Y APE + + SDV+SFG+++ E+ +
Sbjct: 187 GDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTY- 244
Query: 281 IPVDYSR-PPEE---------------VNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLL 324
++ S+ PP E +LIE LK P+G D
Sbjct: 245 --IEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPD------------ 290
Query: 325 KRILLVALRCVDPNAQKRPKM 345
I ++ C + N +RP
Sbjct: 291 -EIYMIMTECWNNNVNQRPSF 310
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 113/261 (43%), Gaps = 44/261 (16%)
Query: 106 VAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHR--MLVYEYVNNGNLE 163
VAVK L ++ + R+F+ E+E + ++H N+V+ G C R L+ EY+ G+L
Sbjct: 40 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 99
Query: 164 QWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKV 223
+L + + KG+ YL + +HRD+ + NIL++ K+
Sbjct: 100 DYLQKHKERIDHIKL---LQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKI 153
Query: 224 SDFGLAKLLGSESSYITTRVMG---TFGYVAPEYASTGMLNERSDVYSFGILIMEVISGR 280
DFGL K+L + + G F Y APE + + SDV+SFG+++ E+ +
Sbjct: 154 GDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTY- 211
Query: 281 IPVDYSR-PPEE---------------VNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLL 324
++ S+ PP E +LIE LK P+G D
Sbjct: 212 --IEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPD------------ 257
Query: 325 KRILLVALRCVDPNAQKRPKM 345
I ++ C + N +RP
Sbjct: 258 -EIYMIMTECWNNNVNQRPSF 277
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 113/261 (43%), Gaps = 44/261 (16%)
Query: 106 VAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHR--MLVYEYVNNGNLE 163
VAVK L ++ + R+F+ E+E + ++H N+V+ G C R L+ EY+ G+L
Sbjct: 47 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 106
Query: 164 QWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKV 223
+L + + KG+ YL + +HRD+ + NIL++ K+
Sbjct: 107 DYLQKHKERIDHIKL---LQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKI 160
Query: 224 SDFGLAKLLGSESSYITTRVMG---TFGYVAPEYASTGMLNERSDVYSFGILIMEVISGR 280
DFGL K+L + + G F Y APE + + SDV+SFG+++ E+ +
Sbjct: 161 GDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTY- 218
Query: 281 IPVDYSR-PPEE---------------VNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLL 324
++ S+ PP E +LIE LK P+G D
Sbjct: 219 --IEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPD------------ 264
Query: 325 KRILLVALRCVDPNAQKRPKM 345
I ++ C + N +RP
Sbjct: 265 -EIYMIMTECWNNNVNQRPSF 284
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 101/206 (49%), Gaps = 19/206 (9%)
Query: 106 VAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRM---LVYEYVNNGNL 162
VAVK L ++ +R+F+ E++ + + +V+ G + G R LV EY+ +G L
Sbjct: 43 VAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGV-SYGPGRQSLRLVMEYLPSGCL 101
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
+L + + I KG+ YL + VHRD+ + NIL++ + K
Sbjct: 102 RDFLQRHRARLDASRLLLYSSQI---CKGMEYLGSR---RCVHRDLAARNILVESEAHVK 155
Query: 223 VSDFGLAKLLGSESSYITTRVMGT--FGYVAPEYASTGMLNERSDVYSFGILIMEVISGR 280
++DFGLAKLL + Y R G + APE S + + +SDV+SFG+++ E+ +
Sbjct: 156 IADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTY- 214
Query: 281 IPVDYSRPPEEVNLIEWLKKMVTNRN 306
D S P E+L+ M R+
Sbjct: 215 --CDKSCSPSA----EFLRMMGCERD 234
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 123/255 (48%), Gaps = 30/255 (11%)
Query: 107 AVKNL--LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYC--AEGAHRMLVYEYVNNGNL 162
AVK+L + + G+ +F E + H N++ LLG C +EG+ ++V Y+ +G+L
Sbjct: 63 AVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNVLSLLGICLRSEGS-PLVVLPYMKHGDL 120
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
++ + +P ++ + L AKG+ +L K VHRD+ + N ++D+ + K
Sbjct: 121 RNFIRNETH--NPTVKDL-IGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVK 174
Query: 223 VSDFGLAKLLGS---ESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISG 279
V+DFGLA+ + +S + T ++A E T +SDV+SFG+L+ E+++
Sbjct: 175 VADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR 234
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNA 339
P P +VN + ++ R +L P+ P V L+C P A
Sbjct: 235 GAP-----PYPDVNTFDITVYLLQGRR---LLQPEYCPDPLYE-------VMLKCWHPKA 279
Query: 340 QKRPKMGHVVHMLEA 354
+ RP +V + A
Sbjct: 280 EMRPSFSELVSRISA 294
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 113/261 (43%), Gaps = 44/261 (16%)
Query: 106 VAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHR--MLVYEYVNNGNLE 163
VAVK L ++ + R+F+ E+E + ++H N+V+ G C R L+ EY+ G+L
Sbjct: 46 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 105
Query: 164 QWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKV 223
+L + + KG+ YL + +HRD+ + NIL++ K+
Sbjct: 106 DYLQKHKERIDHIKL---LQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKI 159
Query: 224 SDFGLAKLLGSESSYITTRVMG---TFGYVAPEYASTGMLNERSDVYSFGILIMEVISGR 280
DFGL K+L + + G F Y APE + + SDV+SFG+++ E+ +
Sbjct: 160 GDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTY- 217
Query: 281 IPVDYSR-PPEE---------------VNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLL 324
++ S+ PP E +LIE LK P+G D
Sbjct: 218 --IEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPD------------ 263
Query: 325 KRILLVALRCVDPNAQKRPKM 345
I ++ C + N +RP
Sbjct: 264 -EIYMIMTECWNNNVNQRPSF 283
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 96/190 (50%), Gaps = 18/190 (9%)
Query: 104 SKVAVKNLLNNRGQAE-REFKVEVEAIGRV-RHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+KVAVK L ++ + + + E+E + + +HKN++ LLG C + ++ EY + GN
Sbjct: 50 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 109
Query: 162 LEQWLHG------------DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIK 209
L ++L P L+ + ++ A+G+ YL K +HRD+
Sbjct: 110 LREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLA 166
Query: 210 SSNILIDKHWNPKVSDFGLAKLLGSESSY-ITTRVMGTFGYVAPEYASTGMLNERSDVYS 268
+ N+L+ + K++DFGLA+ + Y TT ++APE + +SDV+S
Sbjct: 167 ARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWS 226
Query: 269 FGILIMEVIS 278
FG+L+ E+ +
Sbjct: 227 FGVLLWEIFT 236
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 101/206 (49%), Gaps = 19/206 (9%)
Query: 106 VAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRM---LVYEYVNNGNL 162
VAVK L ++ +R+F+ E++ + + +V+ G + G R LV EY+ +G L
Sbjct: 55 VAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGV-SYGPGRQSLRLVMEYLPSGCL 113
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
+L + + I KG+ YL + VHRD+ + NIL++ + K
Sbjct: 114 RDFLQRHRARLDASRLLLYSSQI---CKGMEYLGSR---RCVHRDLAARNILVESEAHVK 167
Query: 223 VSDFGLAKLLGSESSYITTRVMGT--FGYVAPEYASTGMLNERSDVYSFGILIMEVISGR 280
++DFGLAKLL + Y R G + APE S + + +SDV+SFG+++ E+ +
Sbjct: 168 IADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTY- 226
Query: 281 IPVDYSRPPEEVNLIEWLKKMVTNRN 306
D S P E+L+ M R+
Sbjct: 227 --CDKSCSPSA----EFLRMMGCERD 246
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 123/255 (48%), Gaps = 30/255 (11%)
Query: 107 AVKNL--LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYC--AEGAHRMLVYEYVNNGNL 162
AVK+L + + G+ +F E + H N++ LLG C +EG+ ++V Y+ +G+L
Sbjct: 60 AVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNVLSLLGICLRSEGS-PLVVLPYMKHGDL 117
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
++ + +P ++ + L AKG+ +L K VHRD+ + N ++D+ + K
Sbjct: 118 RNFIRNETH--NPTVKDL-IGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVK 171
Query: 223 VSDFGLAKLLGS---ESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISG 279
V+DFGLA+ + +S + T ++A E T +SDV+SFG+L+ E+++
Sbjct: 172 VADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR 231
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNA 339
P P +VN + ++ R +L P+ P V L+C P A
Sbjct: 232 GAP-----PYPDVNTFDITVYLLQGRR---LLQPEYCPDPLYE-------VMLKCWHPKA 276
Query: 340 QKRPKMGHVVHMLEA 354
+ RP +V + A
Sbjct: 277 EMRPSFSELVSRISA 291
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 96/190 (50%), Gaps = 18/190 (9%)
Query: 104 SKVAVKNLLNNRGQAE-REFKVEVEAIGRV-RHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+KVAVK L ++ + + + E+E + + +HKN++ LLG C + ++ EY + GN
Sbjct: 54 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 113
Query: 162 LEQWLHG------------DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIK 209
L ++L P L+ + ++ A+G+ YL K +HRD+
Sbjct: 114 LREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLA 170
Query: 210 SSNILIDKHWNPKVSDFGLAKLLGSESSY-ITTRVMGTFGYVAPEYASTGMLNERSDVYS 268
+ N+L+ + K++DFGLA+ + Y TT ++APE + +SDV+S
Sbjct: 171 ARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWS 230
Query: 269 FGILIMEVIS 278
FG+L+ E+ +
Sbjct: 231 FGVLLWEIFT 240
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 126/262 (48%), Gaps = 32/262 (12%)
Query: 102 DNSKV--AVKNL--LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYC--AEGAHRMLVYE 155
D K+ AVK+L + + G+ +F E + H N++ LLG C +EG+ ++V
Sbjct: 60 DGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNVLSLLGICLRSEGS-PLVVLP 117
Query: 156 YVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILI 215
Y+ +G+L ++ + +P ++ + L AKG+ +L K VHRD+ + N ++
Sbjct: 118 YMKHGDLRNFIRNETH--NPTVKDL-IGFGLQVAKGMKFL---ASKKFVHRDLAARNCML 171
Query: 216 DKHWNPKVSDFGLAKLLGS---ESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGIL 272
D+ + KV+DFGLA+ + +S + T ++A E T +SDV+SFG+L
Sbjct: 172 DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVL 231
Query: 273 IMEVISGRIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVAL 332
+ E+++ P P +VN + ++ R +L P+ P V L
Sbjct: 232 LWELMTRGAP-----PYPDVNTFDITVYLLQGRR---LLQPEYCPDPLYE-------VML 276
Query: 333 RCVDPNAQKRPKMGHVVHMLEA 354
+C P A+ RP +V + A
Sbjct: 277 KCWHPKAEMRPSFSELVSRISA 298
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 113/261 (43%), Gaps = 44/261 (16%)
Query: 106 VAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHR--MLVYEYVNNGNLE 163
VAVK L ++ + R+F+ E+E + ++H N+V+ G C R L+ EY+ G+L
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 101
Query: 164 QWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKV 223
+L + + KG+ YL + +HRD+ + NIL++ K+
Sbjct: 102 DYLQKHKERIDHIKL---LQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKI 155
Query: 224 SDFGLAKLLGSESSYITTRVMG---TFGYVAPEYASTGMLNERSDVYSFGILIMEVISGR 280
DFGL K+L + + G F Y APE + + SDV+SFG+++ E+ +
Sbjct: 156 GDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTY- 213
Query: 281 IPVDYSR-PPEE---------------VNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLL 324
++ S+ PP E +LIE LK P+G D
Sbjct: 214 --IEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPD------------ 259
Query: 325 KRILLVALRCVDPNAQKRPKM 345
I ++ C + N +RP
Sbjct: 260 -EIYMIMTECWNNNVNQRPSF 279
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 113/261 (43%), Gaps = 44/261 (16%)
Query: 106 VAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHR--MLVYEYVNNGNLE 163
VAVK L ++ + R+F+ E+E + ++H N+V+ G C R L+ EY+ G+L
Sbjct: 48 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 107
Query: 164 QWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKV 223
+L + + KG+ YL + +HRD+ + NIL++ K+
Sbjct: 108 DYLQKHKERIDHIKL---LQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKI 161
Query: 224 SDFGLAKLLGSESSYITTRVMG---TFGYVAPEYASTGMLNERSDVYSFGILIMEVISGR 280
DFGL K+L + + G F Y APE + + SDV+SFG+++ E+ +
Sbjct: 162 GDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTY- 219
Query: 281 IPVDYSR-PPEE---------------VNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLL 324
++ S+ PP E +LIE LK P+G D
Sbjct: 220 --IEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPD------------ 265
Query: 325 KRILLVALRCVDPNAQKRPKM 345
I ++ C + N +RP
Sbjct: 266 -EIYMIMTECWNNNVNQRPSF 285
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 113/261 (43%), Gaps = 44/261 (16%)
Query: 106 VAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHR--MLVYEYVNNGNLE 163
VAVK L ++ + R+F+ E+E + ++H N+V+ G C R L+ EY+ G+L
Sbjct: 49 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 108
Query: 164 QWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKV 223
+L + + KG+ YL + +HRD+ + NIL++ K+
Sbjct: 109 DYLQKHKERIDHIKL---LQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKI 162
Query: 224 SDFGLAKLLGSESSYITTRVMG---TFGYVAPEYASTGMLNERSDVYSFGILIMEVISGR 280
DFGL K+L + + G F Y APE + + SDV+SFG+++ E+ +
Sbjct: 163 GDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFT-- 219
Query: 281 IPVDYSR-PPEE---------------VNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLL 324
++ S+ PP E +LIE LK P+G D
Sbjct: 220 -YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPD------------ 266
Query: 325 KRILLVALRCVDPNAQKRPKM 345
I ++ C + N +RP
Sbjct: 267 -EIYMIMTECWNNNVNQRPSF 286
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 123/255 (48%), Gaps = 30/255 (11%)
Query: 107 AVKNL--LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYC--AEGAHRMLVYEYVNNGNL 162
AVK+L + + G+ +F E + H N++ LLG C +EG+ ++V Y+ +G+L
Sbjct: 62 AVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNVLSLLGICLRSEGS-PLVVLPYMKHGDL 119
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
++ + +P ++ + L AKG+ +L K VHRD+ + N ++D+ + K
Sbjct: 120 RNFIRNETH--NPTVKDL-IGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVK 173
Query: 223 VSDFGLAKLLGS---ESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISG 279
V+DFGLA+ + +S + T ++A E T +SDV+SFG+L+ E+++
Sbjct: 174 VADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR 233
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNA 339
P P +VN + ++ R +L P+ P V L+C P A
Sbjct: 234 GAP-----PYPDVNTFDITVYLLQGRR---LLQPEYCPDPLYE-------VMLKCWHPKA 278
Query: 340 QKRPKMGHVVHMLEA 354
+ RP +V + A
Sbjct: 279 EMRPSFSELVSRISA 293
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 96/190 (50%), Gaps = 18/190 (9%)
Query: 104 SKVAVKNLLNNRGQAE-REFKVEVEAIGRV-RHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+KVAVK L ++ + + + E+E + + +HKN++ LLG C + ++ EY + GN
Sbjct: 53 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 112
Query: 162 LEQWLHG------------DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIK 209
L ++L P L+ + ++ A+G+ YL K +HRD+
Sbjct: 113 LREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLA 169
Query: 210 SSNILIDKHWNPKVSDFGLAKLLGSESSY-ITTRVMGTFGYVAPEYASTGMLNERSDVYS 268
+ N+L+ + K++DFGLA+ + Y TT ++APE + +SDV+S
Sbjct: 170 ARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWS 229
Query: 269 FGILIMEVIS 278
FG+L+ E+ +
Sbjct: 230 FGVLLWEIFT 239
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 126/262 (48%), Gaps = 32/262 (12%)
Query: 102 DNSKV--AVKNL--LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYC--AEGAHRMLVYE 155
D K+ AVK+L + + G+ +F E + H N++ LLG C +EG+ ++V
Sbjct: 114 DGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNVLSLLGICLRSEGS-PLVVLP 171
Query: 156 YVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILI 215
Y+ +G+L ++ + +P ++ + L AKG+ +L K VHRD+ + N ++
Sbjct: 172 YMKHGDLRNFIRNETH--NPTVKDL-IGFGLQVAKGMKFLAS---KKFVHRDLAARNCML 225
Query: 216 DKHWNPKVSDFGLAKLLGS---ESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGIL 272
D+ + KV+DFGLA+ + +S + T ++A E T +SDV+SFG+L
Sbjct: 226 DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVL 285
Query: 273 IMEVISGRIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVAL 332
+ E+++ P P +VN + ++ R +L P+ P V L
Sbjct: 286 LWELMTRGAP-----PYPDVNTFDITVYLLQGRR---LLQPEYCPDPLYE-------VML 330
Query: 333 RCVDPNAQKRPKMGHVVHMLEA 354
+C P A+ RP +V + A
Sbjct: 331 KCWHPKAEMRPSFSELVSRISA 352
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 113/261 (43%), Gaps = 44/261 (16%)
Query: 106 VAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHR--MLVYEYVNNGNLE 163
VAVK L ++ + R+F+ E+E + ++H N+V+ G C R L+ EY+ G+L
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 101
Query: 164 QWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKV 223
+L + + KG+ YL + +HRD+ + NIL++ K+
Sbjct: 102 DYLQKHKERIDHIKL---LQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKI 155
Query: 224 SDFGLAKLLGSESSYITTRVMG---TFGYVAPEYASTGMLNERSDVYSFGILIMEVISGR 280
DFGL K+L + + G F Y APE + + SDV+SFG+++ E+ +
Sbjct: 156 GDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTY- 213
Query: 281 IPVDYSR-PPEE---------------VNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLL 324
++ S+ PP E +LIE LK P+G D
Sbjct: 214 --IEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPD------------ 259
Query: 325 KRILLVALRCVDPNAQKRPKM 345
I ++ C + N +RP
Sbjct: 260 -EIYMIMTECWNNNVNQRPSF 279
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 96/190 (50%), Gaps = 18/190 (9%)
Query: 104 SKVAVKNLLNNRGQAE-REFKVEVEAIGRV-RHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+KVAVK L ++ + + + E+E + + +HKN++ LLG C + ++ EY + GN
Sbjct: 61 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 120
Query: 162 LEQWLHG------------DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIK 209
L ++L P L+ + ++ A+G+ YL K +HRD+
Sbjct: 121 LREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLA 177
Query: 210 SSNILIDKHWNPKVSDFGLAKLLGSESSY-ITTRVMGTFGYVAPEYASTGMLNERSDVYS 268
+ N+L+ + K++DFGLA+ + Y TT ++APE + +SDV+S
Sbjct: 178 ARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWS 237
Query: 269 FGILIMEVIS 278
FG+L+ E+ +
Sbjct: 238 FGVLLWEIFT 247
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 96/190 (50%), Gaps = 18/190 (9%)
Query: 104 SKVAVKNLLNNRGQAE-REFKVEVEAIGRV-RHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+KVAVK L ++ + + + E+E + + +HKN++ LLG C + ++ EY + GN
Sbjct: 61 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 120
Query: 162 LEQWLHG------------DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIK 209
L ++L P L+ + ++ A+G+ YL K +HRD+
Sbjct: 121 LREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLA 177
Query: 210 SSNILIDKHWNPKVSDFGLAKLLGSESSY-ITTRVMGTFGYVAPEYASTGMLNERSDVYS 268
+ N+L+ + K++DFGLA+ + Y TT ++APE + +SDV+S
Sbjct: 178 ARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWS 237
Query: 269 FGILIMEVIS 278
FG+L+ E+ +
Sbjct: 238 FGVLLWEIFT 247
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 113/261 (43%), Gaps = 44/261 (16%)
Query: 106 VAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHR--MLVYEYVNNGNLE 163
VAVK L ++ + R+F+ E+E + ++H N+V+ G C R L+ EY+ G+L
Sbjct: 60 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 119
Query: 164 QWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKV 223
+L + + KG+ YL + +HRD+ + NIL++ K+
Sbjct: 120 DYLQKHKERIDHIKL---LQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKI 173
Query: 224 SDFGLAKLLGSESSYITTRVMG---TFGYVAPEYASTGMLNERSDVYSFGILIMEVISGR 280
DFGL K+L + + G F Y APE + + SDV+SFG+++ E+ +
Sbjct: 174 GDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFT-- 230
Query: 281 IPVDYSR-PPEE---------------VNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLL 324
++ S+ PP E +LIE LK P+G D
Sbjct: 231 -YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPD------------ 277
Query: 325 KRILLVALRCVDPNAQKRPKM 345
I ++ C + N +RP
Sbjct: 278 -EIYMIMTECWNNNVNQRPSF 297
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 113/261 (43%), Gaps = 44/261 (16%)
Query: 106 VAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHR--MLVYEYVNNGNLE 163
VAVK L ++ + R+F+ E+E + ++H N+V+ G C R L+ EY+ G+L
Sbjct: 60 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 119
Query: 164 QWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKV 223
+L + + KG+ YL + +HRD+ + NIL++ K+
Sbjct: 120 DYLQKHKERIDHIKL---LQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKI 173
Query: 224 SDFGLAKLLGSESSYITTRVMG---TFGYVAPEYASTGMLNERSDVYSFGILIMEVISGR 280
DFGL K+L + + G F Y APE + + SDV+SFG+++ E+ +
Sbjct: 174 GDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFT-- 230
Query: 281 IPVDYSR-PPEE---------------VNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLL 324
++ S+ PP E +LIE LK P+G D
Sbjct: 231 -YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPD------------ 277
Query: 325 KRILLVALRCVDPNAQKRPKM 345
I ++ C + N +RP
Sbjct: 278 -EIYMIMTECWNNNVNQRPSF 297
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 114/261 (43%), Gaps = 44/261 (16%)
Query: 106 VAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHR--MLVYEYVNNGNLE 163
VAVK L ++ + R+F+ E+E + ++H N+V+ G C R L+ E++ G+L
Sbjct: 45 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLR 104
Query: 164 QWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKV 223
++L + + KG+ YL + +HRD+ + NIL++ K+
Sbjct: 105 EYLQKHKERIDHIKL---LQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKI 158
Query: 224 SDFGLAKLLGSESSYITTRVMG---TFGYVAPEYASTGMLNERSDVYSFGILIMEVISGR 280
DFGL K+L + + G F Y APE + + SDV+SFG+++ E+ +
Sbjct: 159 GDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTY- 216
Query: 281 IPVDYSR-PPEE---------------VNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLL 324
++ S+ PP E +LIE LK P+G D
Sbjct: 217 --IEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPD------------ 262
Query: 325 KRILLVALRCVDPNAQKRPKM 345
I ++ C + N +RP
Sbjct: 263 -EIYMIMTECWNNNVNQRPSF 282
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 98/188 (52%), Gaps = 18/188 (9%)
Query: 106 VAVKNLLNNRGQAE-REFKVEVEAIGRV-RHKNLVRLLGYCAEGAHRMLVYEYVNNGNLE 163
VAVK L ++ + + + E+E + + +HKN++ LLG C + ++ Y + GNL
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLR 129
Query: 164 QWLHG----------DVG--PCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSS 211
++L D+ P +T++ ++ A+G+ YL K +HRD+ +
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAAR 186
Query: 212 NILIDKHWNPKVSDFGLAKLLGSESSY-ITTRVMGTFGYVAPEYASTGMLNERSDVYSFG 270
N+L+ ++ K++DFGLA+ + + Y TT ++APE + +SDV+SFG
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 271 ILIMEVIS 278
+L+ E+ +
Sbjct: 247 VLMWEIFT 254
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 96/190 (50%), Gaps = 18/190 (9%)
Query: 104 SKVAVKNLLNNRGQAE-REFKVEVEAIGRV-RHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+KVAVK L ++ + + + E+E + + +HKN++ LLG C + ++ EY + GN
Sbjct: 102 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 161
Query: 162 LEQWLHG------------DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIK 209
L ++L P L+ + ++ A+G+ YL K +HRD+
Sbjct: 162 LREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLA 218
Query: 210 SSNILIDKHWNPKVSDFGLAKLLGSESSY-ITTRVMGTFGYVAPEYASTGMLNERSDVYS 268
+ N+L+ + K++DFGLA+ + Y TT ++APE + +SDV+S
Sbjct: 219 ARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWS 278
Query: 269 FGILIMEVIS 278
FG+L+ E+ +
Sbjct: 279 FGVLLWEIFT 288
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 123/256 (48%), Gaps = 28/256 (10%)
Query: 106 VAVK--NLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLE 163
VAVK N+ Q + FK EV + + RH N++ +GY + +V ++ +L
Sbjct: 61 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLY 119
Query: 164 QWLHGDVGPCSPLTWEI--RMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
LH +E+ ++I TA+G+ YLH ++HRD+KS+NI + +
Sbjct: 120 HHLH-----IIETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTV 171
Query: 222 KVSDFGLAKLLGSES-SYITTRVMGTFGYVAPEYASTGMLNE---RSDVYSFGILIMEVI 277
K+ DFGLA S S+ ++ G+ ++APE N +SDVY+FGI++ E++
Sbjct: 172 KIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELM 231
Query: 278 SGRIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDP 337
+G++P YS +N + + MV G L P L K S K + + C+
Sbjct: 232 TGQLP--YS----NINNRDQIIFMVG----RGYLSPDL-SKVRSNCPKAMKRLMAECLKK 280
Query: 338 NAQKRPKMGHVVHMLE 353
+RP ++ +E
Sbjct: 281 KRDERPLFPQILASIE 296
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 94/190 (49%), Gaps = 18/190 (9%)
Query: 104 SKVAVKNLLNNRGQAE-REFKVEVEAIGRV-RHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+KVAVK L ++ + + + E+E + + +HKN++ LLG C + ++ EY + GN
Sbjct: 61 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 120
Query: 162 LEQWLHGDVGPCSPLTWEIRMN------------IILGTAKGLSYLHEGLEPKVVHRDIK 209
L ++L P ++ N A+G+ YL K +HRD+
Sbjct: 121 LREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLA 177
Query: 210 SSNILIDKHWNPKVSDFGLAKLLGS-ESSYITTRVMGTFGYVAPEYASTGMLNERSDVYS 268
+ N+L+ + K++DFGLA+ + + TT ++APE + +SDV+S
Sbjct: 178 ARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWS 237
Query: 269 FGILIMEVIS 278
FG+L+ E+ +
Sbjct: 238 FGVLLWEIFT 247
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 123/256 (48%), Gaps = 28/256 (10%)
Query: 106 VAVK--NLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLE 163
VAVK N+ Q + FK EV + + RH N++ +GY + +V ++ +L
Sbjct: 53 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLY 111
Query: 164 QWLHGDVGPCSPLTWEI--RMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
LH +E+ ++I TA+G+ YLH ++HRD+KS+NI + +
Sbjct: 112 HHLH-----IIETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTV 163
Query: 222 KVSDFGLAKLLGSES-SYITTRVMGTFGYVAPEYASTGMLNE---RSDVYSFGILIMEVI 277
K+ DFGLA S S+ ++ G+ ++APE N +SDVY+FGI++ E++
Sbjct: 164 KIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELM 223
Query: 278 SGRIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDP 337
+G++P YS +N + + MV G L P L K S K + + C+
Sbjct: 224 TGQLP--YS----NINNRDQIIFMVG----RGYLSPDL-SKVRSNCPKAMKRLMAECLKK 272
Query: 338 NAQKRPKMGHVVHMLE 353
+RP ++ +E
Sbjct: 273 KRDERPLFPQILASIE 288
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 121/256 (47%), Gaps = 28/256 (10%)
Query: 106 VAVK--NLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLE 163
VAVK N+ Q + FK EV + + RH N++ +GY + +V ++ +L
Sbjct: 33 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLY 91
Query: 164 QWLHGDVGPCSPLTWEI--RMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
LH +E+ ++I TA+G+ YLH ++HRD+KS+NI + +
Sbjct: 92 HHLH-----IIETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTV 143
Query: 222 KVSDFGLAKLLGSES-SYITTRVMGTFGYVAPEYASTGMLNE---RSDVYSFGILIMEVI 277
K+ DFGLA S S+ ++ G+ ++APE N +SDVY+FGI++ E++
Sbjct: 144 KIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELM 203
Query: 278 SGRIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDP 337
+G++P YS +I + + G L P L K S K + + C+
Sbjct: 204 TGQLP--YSNINNRDQIIFMVGR--------GYLSPDL-SKVRSNCPKAMKRLMAECLKK 252
Query: 338 NAQKRPKMGHVVHMLE 353
+RP ++ +E
Sbjct: 253 KRDERPLFPQILASIE 268
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 93/187 (49%), Gaps = 17/187 (9%)
Query: 106 VAVKNLLNN-RGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K L + G EF+ E R++H N+V LLG + +++ Y ++G+L +
Sbjct: 59 VAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHE 118
Query: 165 WL-----HGDVGPC-------SPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSN 212
+L H DVG S L ++++ A G+ YL VVH+D+ + N
Sbjct: 119 FLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRN 175
Query: 213 ILIDKHWNPKVSDFGLAKLLGSESSY-ITTRVMGTFGYVAPEYASTGMLNERSDVYSFGI 271
+L+ N K+SD GL + + + Y + + ++APE G + SD++S+G+
Sbjct: 176 VLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGV 235
Query: 272 LIMEVIS 278
++ EV S
Sbjct: 236 VLWEVFS 242
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 101/218 (46%), Gaps = 39/218 (17%)
Query: 104 SKVAVKNLLNN-RGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
+ VAVK L + +F+ E + + N+V+LLG CA G L++EY+ G+L
Sbjct: 78 TMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDL 137
Query: 163 EQWL------------HGDV---------GPCSPLTWEIRMNIILGTAKGLSYLHEGLEP 201
++L H D+ GP PL+ ++ I A G++YL E
Sbjct: 138 NEFLRSMSPHTVCSLSHSDLSTRARVSSPGP-PPLSCAEQLCIARQVAAGMAYLSER--- 193
Query: 202 KVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSY-------ITTRVMGTFGYVAPEY 254
K VHRD+ + N L+ ++ K++DFGL++ + S Y I R ++ PE
Sbjct: 194 KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIR------WMPPES 247
Query: 255 ASTGMLNERSDVYSFGILIMEVISGRIPVDYSRPPEEV 292
SDV+++G+++ E+ S + Y EEV
Sbjct: 248 IFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEV 285
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 103/225 (45%), Gaps = 39/225 (17%)
Query: 135 KNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGD-VGPCSPLTWEIRMNIILGTAKGLS 193
+N V+ + + + + EY NG L +H + + W + I+ + LS
Sbjct: 75 RNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQIL----EALS 130
Query: 194 YLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAK---------LLGSE----SSYIT 240
Y+H ++HRD+K NI ID+ N K+ DFGLAK L S+ SS
Sbjct: 131 YIHS---QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNL 187
Query: 241 TRVMGTFGYVAPEYAS-TGMLNERSDVYSFGILIMEVISGRIPVDYSRPPEEVNLIEWLK 299
T +GT YVA E TG NE+ D+YS GI+ E+I +S E VN+++ L+
Sbjct: 188 TSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI-----YPFSTGMERVNILKKLR 242
Query: 300 KMVTNRNPEGVLDPKLP-EKPTSRLLKRILLVALRCVDPNAQKRP 343
V+ P D K+ EK RLL +D + KRP
Sbjct: 243 S-VSIEFPPDFDDNKMKVEKKIIRLL----------IDHDPNKRP 276
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 93/187 (49%), Gaps = 17/187 (9%)
Query: 106 VAVKNLLNN-RGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K L + G EF+ E R++H N+V LLG + +++ Y ++G+L +
Sbjct: 42 VAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHE 101
Query: 165 WL-----HGDVGPC-------SPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSN 212
+L H DVG S L ++++ A G+ YL VVH+D+ + N
Sbjct: 102 FLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRN 158
Query: 213 ILIDKHWNPKVSDFGLAKLLGSESSY-ITTRVMGTFGYVAPEYASTGMLNERSDVYSFGI 271
+L+ N K+SD GL + + + Y + + ++APE G + SD++S+G+
Sbjct: 159 VLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGV 218
Query: 272 LIMEVIS 278
++ EV S
Sbjct: 219 VLWEVFS 225
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 93/183 (50%), Gaps = 12/183 (6%)
Query: 105 KVAVKNLLNNRGQAERE-FKVEVEAIGRV-RHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
KVAVK L + E+E E++ + + +H+N+V LLG C G +++ EY G+L
Sbjct: 78 KVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137
Query: 163 EQWLHG------DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILID 216
+L D PL ++ A+G+++L +HRD+ + N+L+
Sbjct: 138 LNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLAS---KNCIHRDVAARNVLLT 194
Query: 217 KHWNPKVSDFGLAKLLGSESSYITT-RVMGTFGYVAPEYASTGMLNERSDVYSFGILIME 275
K+ DFGLA+ + ++S+YI ++APE + +SDV+S+GIL+ E
Sbjct: 195 NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWE 254
Query: 276 VIS 278
+ S
Sbjct: 255 IFS 257
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 119/272 (43%), Gaps = 36/272 (13%)
Query: 106 VAVKNLLNNRGQAERE-FKVEVEAIGRV-RHKNLVRLLGYCAEGAHRMLVYEYVNNGNLE 163
VAVK L + ERE E++ + + H N+V LLG C G +++ EY G+L
Sbjct: 79 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 138
Query: 164 QWLHG--DVGPCSPLTWEI------------RMNIILGTAKGLSYLHEGLEPKVVHRDIK 209
+L D CS + I ++ AKG+++L +HRD+
Sbjct: 139 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS---KNCIHRDLA 195
Query: 210 SSNILIDKHWNPKVSDFGLAKLLGSESSYITT-RVMGTFGYVAPEYASTGMLNERSDVYS 268
+ NIL+ K+ DFGLA+ + ++S+Y+ ++APE + SDV+S
Sbjct: 196 ARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWS 255
Query: 269 FGILIMEVIS-GRIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRI 327
+GI + E+ S G P Y P + + +K+ +PE P +
Sbjct: 256 YGIFLWELFSLGSSP--YPGMPVDSKFYKMIKEGFRMLSPE--------HAPA-----EM 300
Query: 328 LLVALRCVDPNAQKRPKMGHVVHMLEAQESPS 359
+ C D + KRP +V ++E Q S S
Sbjct: 301 YDIMKTCWDADPLKRPTFKQIVQLIEKQISES 332
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 93/183 (50%), Gaps = 12/183 (6%)
Query: 105 KVAVKNLLNNRGQAERE-FKVEVEAIGRV-RHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
KVAVK L + E+E E++ + + +H+N+V LLG C G +++ EY G+L
Sbjct: 70 KVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 129
Query: 163 EQWLHG------DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILID 216
+L D PL ++ A+G+++L +HRD+ + N+L+
Sbjct: 130 LNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLAS---KNCIHRDVAARNVLLT 186
Query: 217 KHWNPKVSDFGLAKLLGSESSYITT-RVMGTFGYVAPEYASTGMLNERSDVYSFGILIME 275
K+ DFGLA+ + ++S+YI ++APE + +SDV+S+GIL+ E
Sbjct: 187 NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWE 246
Query: 276 VIS 278
+ S
Sbjct: 247 IFS 249
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 119/272 (43%), Gaps = 36/272 (13%)
Query: 106 VAVKNLLNNRGQAERE-FKVEVEAIGRV-RHKNLVRLLGYCAEGAHRMLVYEYVNNGNLE 163
VAVK L + ERE E++ + + H N+V LLG C G +++ EY G+L
Sbjct: 74 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 133
Query: 164 QWLHG--DVGPCSPLTWEI------------RMNIILGTAKGLSYLHEGLEPKVVHRDIK 209
+L D CS + I ++ AKG+++L +HRD+
Sbjct: 134 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS---KNCIHRDLA 190
Query: 210 SSNILIDKHWNPKVSDFGLAKLLGSESSYITT-RVMGTFGYVAPEYASTGMLNERSDVYS 268
+ NIL+ K+ DFGLA+ + ++S+Y+ ++APE + SDV+S
Sbjct: 191 ARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWS 250
Query: 269 FGILIMEVIS-GRIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRI 327
+GI + E+ S G P Y P + + +K+ +PE P +
Sbjct: 251 YGIFLWELFSLGSSP--YPGMPVDSKFYKMIKEGFRMLSPE--------HAPA-----EM 295
Query: 328 LLVALRCVDPNAQKRPKMGHVVHMLEAQESPS 359
+ C D + KRP +V ++E Q S S
Sbjct: 296 YDIMKTCWDADPLKRPTFKQIVQLIEKQISES 327
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 119/272 (43%), Gaps = 36/272 (13%)
Query: 106 VAVKNLLNNRGQAERE-FKVEVEAIGRV-RHKNLVRLLGYCAEGAHRMLVYEYVNNGNLE 163
VAVK L + ERE E++ + + H N+V LLG C G +++ EY G+L
Sbjct: 56 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 115
Query: 164 QWLHG--DVGPCSPLTWEI------------RMNIILGTAKGLSYLHEGLEPKVVHRDIK 209
+L D CS + I ++ AKG+++L +HRD+
Sbjct: 116 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS---KNCIHRDLA 172
Query: 210 SSNILIDKHWNPKVSDFGLAKLLGSESSYITT-RVMGTFGYVAPEYASTGMLNERSDVYS 268
+ NIL+ K+ DFGLA+ + ++S+Y+ ++APE + SDV+S
Sbjct: 173 ARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWS 232
Query: 269 FGILIMEVIS-GRIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRI 327
+GI + E+ S G P Y P + + +K+ +PE P +
Sbjct: 233 YGIFLWELFSLGSSP--YPGMPVDSKFYKMIKEGFRMLSPE--------HAPA-----EM 277
Query: 328 LLVALRCVDPNAQKRPKMGHVVHMLEAQESPS 359
+ C D + KRP +V ++E Q S S
Sbjct: 278 YDIMKTCWDADPLKRPTFKQIVQLIEKQISES 309
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 119/272 (43%), Gaps = 36/272 (13%)
Query: 106 VAVKNLLNNRGQAERE-FKVEVEAIGRV-RHKNLVRLLGYCAEGAHRMLVYEYVNNGNLE 163
VAVK L + ERE E++ + + H N+V LLG C G +++ EY G+L
Sbjct: 72 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 131
Query: 164 QWLHG--DVGPCSPLTWEI------------RMNIILGTAKGLSYLHEGLEPKVVHRDIK 209
+L D CS + I ++ AKG+++L +HRD+
Sbjct: 132 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS---KNCIHRDLA 188
Query: 210 SSNILIDKHWNPKVSDFGLAKLLGSESSYITT-RVMGTFGYVAPEYASTGMLNERSDVYS 268
+ NIL+ K+ DFGLA+ + ++S+Y+ ++APE + SDV+S
Sbjct: 189 ARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWS 248
Query: 269 FGILIMEVIS-GRIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRI 327
+GI + E+ S G P Y P + + +K+ +PE P +
Sbjct: 249 YGIFLWELFSLGSSP--YPGMPVDSKFYKMIKEGFRMLSPE--------HAPA-----EM 293
Query: 328 LLVALRCVDPNAQKRPKMGHVVHMLEAQESPS 359
+ C D + KRP +V ++E Q S S
Sbjct: 294 YDIMKTCWDADPLKRPTFKQIVQLIEKQISES 325
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 119/240 (49%), Gaps = 26/240 (10%)
Query: 120 REFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWE 179
+ F+ EV + + RH N++ +GY + + +V ++ +L + LH V ++
Sbjct: 77 QAFRNEVAVLRKTRHVNILLFMGYMTKD-NLAIVTQWCEGSSLYKHLH--VQETKFQMFQ 133
Query: 180 IRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSES-SY 238
+ ++I TA+G+ YLH ++HRD+KS+NI + + K+ DFGLA + S S
Sbjct: 134 L-IDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQ 189
Query: 239 ITTRVMGTFGYVAPE---YASTGMLNERSDVYSFGILIMEVISGRIPVDYSRPPEEVNLI 295
+ G+ ++APE + +SDVYS+GI++ E+++G +P + +++
Sbjct: 190 QVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIF- 248
Query: 296 EWLKKMVTNRNPEGVLDPKLPE--KPTSRLLKRILLVALRCVDPNAQKRPKMGHVVHMLE 353
MV G P L + K + +KR LVA CV ++RP ++ +E
Sbjct: 249 -----MVG----RGYASPDLSKLYKNCPKAMKR--LVA-DCVKKVKEERPLFPQILSSIE 296
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 119/272 (43%), Gaps = 36/272 (13%)
Query: 106 VAVKNLLNNRGQAERE-FKVEVEAIGRV-RHKNLVRLLGYCAEGAHRMLVYEYVNNGNLE 163
VAVK L + ERE E++ + + H N+V LLG C G +++ EY G+L
Sbjct: 79 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 138
Query: 164 QWLHG--DVGPCSPLTWEI------------RMNIILGTAKGLSYLHEGLEPKVVHRDIK 209
+L D CS + I ++ AKG+++L +HRD+
Sbjct: 139 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS---KNCIHRDLA 195
Query: 210 SSNILIDKHWNPKVSDFGLAKLLGSESSYITT-RVMGTFGYVAPEYASTGMLNERSDVYS 268
+ NIL+ K+ DFGLA+ + ++S+Y+ ++APE + SDV+S
Sbjct: 196 ARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWS 255
Query: 269 FGILIMEVIS-GRIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRI 327
+GI + E+ S G P Y P + + +K+ +PE P +
Sbjct: 256 YGIFLWELFSLGSSP--YPGMPVDSKFYKMIKEGFRMLSPE--------HAPA-----EM 300
Query: 328 LLVALRCVDPNAQKRPKMGHVVHMLEAQESPS 359
+ C D + KRP +V ++E Q S S
Sbjct: 301 YDIMKTCWDADPLKRPTFKQIVQLIEKQISES 332
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 106/212 (50%), Gaps = 30/212 (14%)
Query: 103 NSKVAVKNL-LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAH----RMLVYEYV 157
N VAVK + ++ + E+ EV ++ ++H+N+++ +G G L+ +
Sbjct: 47 NEYVAVKIFPIQDKQSWQNEY--EVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFH 104
Query: 158 NNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHE-------GLEPKVVHRDIKS 210
G+L +L +V ++W +I A+GL+YLHE G +P + HRDIKS
Sbjct: 105 EKGSLSDFLKANV-----VSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKS 159
Query: 211 SNILIDKHWNPKVSDFGLA-KLLGSESSYITTRVMGTFGYVAPEYASTGMLNERS----- 264
N+L+ + ++DFGLA K +S+ T +GT Y+APE + +R
Sbjct: 160 KNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRI 219
Query: 265 DVYSFGILIMEVIS----GRIPVD-YSRPPEE 291
D+Y+ G+++ E+ S PVD Y P EE
Sbjct: 220 DMYAMGLVLWELASRCTAADGPVDEYMLPFEE 251
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 95/193 (49%), Gaps = 21/193 (10%)
Query: 105 KVAVKNLLNNRGQAER-----EFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNN 159
KVAVK L NR + + K E++ + RH ++++L + +V EYV+
Sbjct: 38 KVAVKIL--NRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSG 95
Query: 160 GNLEQWL--HGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
G L ++ HG V E R + + Y H + VVHRD+K N+L+D
Sbjct: 96 GELFDYICKHGRVE-----EMEAR-RLFQQILSAVDYCHRHM---VVHRDLKPENVLLDA 146
Query: 218 HWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGML-NERSDVYSFGILIMEV 276
H N K++DFGL+ ++ S+ ++ T G+ Y APE S + D++S G+++ +
Sbjct: 147 HMNAKIADFGLSNMM-SDGEFLRTSC-GSPNYAAPEVISGRLYAGPEVDIWSCGVILYAL 204
Query: 277 ISGRIPVDYSRPP 289
+ G +P D P
Sbjct: 205 LCGTLPFDDEHVP 217
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 85/167 (50%), Gaps = 6/167 (3%)
Query: 117 QAEREFKV-EVEAIGRVRHKNLVRLLGYCAEGAHRML--VYEYVNNGNLEQWLHGDVGPC 173
+AE++ V EV + ++H N+VR + + L V EY G+L +
Sbjct: 46 EAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKER 105
Query: 174 SPLTWEIRMNIILGTAKGLSYLHEGLEP--KVVHRDIKSSNILIDKHWNPKVSDFGLAKL 231
L E + ++ L H + V+HRD+K +N+ +D N K+ DFGLA++
Sbjct: 106 QYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI 165
Query: 232 LGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS 278
L ++S+ T V GT Y++PE + NE+SD++S G L+ E+ +
Sbjct: 166 LNHDTSFAKTFV-GTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 126/263 (47%), Gaps = 27/263 (10%)
Query: 106 VAVKNLL--NNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLE 163
VA+K L ++ ++ E++ + ++RH+NLV LL C + LV+E+V++ L+
Sbjct: 53 VAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILD 112
Query: 164 QWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKV 223
++ P + L +++ + G+ + H ++HRDIK NIL+ + K+
Sbjct: 113 DL---ELFP-NGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKL 165
Query: 224 SDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGM-LNERSDVYSFGILIMEVISGR-- 280
DFG A+ L + V T Y APE + + DV++ G L+ E+ G
Sbjct: 166 CDFGFARTLAAPGEVYDDEV-ATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPL 224
Query: 281 IPVDYSRPPEEVNLIEWLKKMV------TNRNP--EGVLDPKLPEK-PTSR----LLKRI 327
P D S + +++ L ++ N+NP GV P++ E+ P R L + +
Sbjct: 225 FPGD-SDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVV 283
Query: 328 LLVALRCVDPNAQKRPKMGHVVH 350
+ +A +C+ + KRP ++H
Sbjct: 284 IDLAKKCLHIDPDKRPFCAELLH 306
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 97/198 (48%), Gaps = 27/198 (13%)
Query: 104 SKVAVKNLLNNRGQAE-REFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
+ VAVK L N +E R+ E + +V H ++++L G C++ +L+ EY G+L
Sbjct: 54 TTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSL 113
Query: 163 EQWLHGD--VGPC------------------SPLTWEIRMNIILGTAKGLSYLHEGLEPK 202
+L VGP LT ++ ++G+ YL E K
Sbjct: 114 RGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---K 170
Query: 203 VVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTF--GYVAPEYASTGML 260
+VHRD+ + NIL+ + K+SDFGL++ + E S + R G ++A E +
Sbjct: 171 LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV-KRSQGRIPVKWMAIESLFDHIY 229
Query: 261 NERSDVYSFGILIMEVIS 278
+SDV+SFG+L+ E+++
Sbjct: 230 TTQSDVWSFGVLLWEIVT 247
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 94/192 (48%), Gaps = 19/192 (9%)
Query: 105 KVAVKNLLNNRGQAEREFKV------EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVN 158
KVAVK L NR Q R V E++ + RH ++++L + + +V EYV+
Sbjct: 43 KVAVKIL--NR-QKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVS 99
Query: 159 NGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKH 218
G L ++ + L + + G+ Y H + VVHRD+K N+L+D H
Sbjct: 100 GGELFDYICKN----GRLDEKESRRLFQQILSGVDYCHRHM---VVHRDLKPENVLLDAH 152
Query: 219 WNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGML-NERSDVYSFGILIMEVI 277
N K++DFGL+ ++ S+ ++ G+ Y APE S + D++S G+++ ++
Sbjct: 153 MNAKIADFGLSNMM-SDGEFLRXSC-GSPNYAAPEVISGRLYAGPEVDIWSSGVILYALL 210
Query: 278 SGRIPVDYSRPP 289
G +P D P
Sbjct: 211 CGTLPFDDDHVP 222
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 19/206 (9%)
Query: 106 VAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLG--YCAEGAHRMLVYEYVNNGNLE 163
VAVK L ++ +R+F+ E++ + + +V+ G Y LV EY+ +G L
Sbjct: 39 VAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLR 98
Query: 164 QWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKV 223
+L + + I KG+ YL + VHRD+ + NIL++ + K+
Sbjct: 99 DFLQRHRARLDASRLLLYSSQI---CKGMEYLGSR---RCVHRDLAARNILVESEAHVKI 152
Query: 224 SDFGLAKLLGSESSYITTRVMG---TFGYVAPEYASTGMLNERSDVYSFGILIMEVISGR 280
+DFGLAKLL + R G F Y APE S + + +SDV+SFG+++ E+ +
Sbjct: 153 ADFGLAKLLPLDKDXXVVREPGQSPIFWY-APESLSDNIFSRQSDVWSFGVVLYELFTY- 210
Query: 281 IPVDYSRPPEEVNLIEWLKKMVTNRN 306
D S P E+L+ M R+
Sbjct: 211 --CDKSCSPSA----EFLRMMGCERD 230
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 123/250 (49%), Gaps = 32/250 (12%)
Query: 106 VAVKNLLNNRG-QAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K L +A +E E + V + ++ RLLG C + L+ + + G L
Sbjct: 48 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGXLLD 106
Query: 165 WL--HGD-VGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
++ H D +G L W +++ AKG++YL + ++VHRD+ + N+L+ +
Sbjct: 107 YVREHKDNIGSQYLLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHV 157
Query: 222 KVSDFGLAKLLGS-ESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
K++DFGLAKLLG+ E Y ++A E + +SDV+S+G+ + E+++ G
Sbjct: 158 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 217
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNA 339
P D P E++ I L+K +LP+ P + + ++ ++C +A
Sbjct: 218 SKPYD-GIPASEISSI--LEK-----------GERLPQPPICTI--DVYMIMVKCWMIDA 261
Query: 340 QKRPKMGHVV 349
RPK ++
Sbjct: 262 DSRPKFRELI 271
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 123/250 (49%), Gaps = 32/250 (12%)
Query: 106 VAVKNLLNNRG-QAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K L +A +E E + V + ++ RLLG C + L+ + + G L
Sbjct: 49 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLD 107
Query: 165 WL--HGD-VGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
++ H D +G L W +++ AKG++YL + ++VHRD+ + N+L+ +
Sbjct: 108 YVREHKDNIGSQYLLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHV 158
Query: 222 KVSDFGLAKLLGS-ESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
K++DFGLAKLLG+ E Y ++A E + +SDV+S+G+ + E+++ G
Sbjct: 159 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 218
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNA 339
P D P E++ I L+K +LP+ P + + ++ ++C +A
Sbjct: 219 SKPYD-GIPASEISSI--LEK-----------GERLPQPPICTI--DVYMIMVKCWMIDA 262
Query: 340 QKRPKMGHVV 349
RPK ++
Sbjct: 263 DSRPKFRELI 272
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 123/250 (49%), Gaps = 32/250 (12%)
Query: 106 VAVKNLLNNRG-QAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K L +A +E E + V + ++ RLLG C + L+ + + G L
Sbjct: 48 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLD 106
Query: 165 WL--HGD-VGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
++ H D +G L W +++ AKG++YL + ++VHRD+ + N+L+ +
Sbjct: 107 YVREHKDNIGSQYLLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHV 157
Query: 222 KVSDFGLAKLLGS-ESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
K++DFGLAKLLG+ E Y ++A E + +SDV+S+G+ + E+++ G
Sbjct: 158 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 217
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNA 339
P D P E++ I L+K +LP+ P + + ++ ++C +A
Sbjct: 218 SKPYD-GIPASEISSI--LEK-----------GERLPQPPICTI--DVYMIMVKCWMIDA 261
Query: 340 QKRPKMGHVV 349
RPK ++
Sbjct: 262 DSRPKFRELI 271
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 123/250 (49%), Gaps = 32/250 (12%)
Query: 106 VAVKNLLNNRG-QAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K L +A +E E + V + ++ RLLG C + L+ + + G L
Sbjct: 47 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGXLLD 105
Query: 165 WL--HGD-VGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
++ H D +G L W +++ AKG++YL + ++VHRD+ + N+L+ +
Sbjct: 106 YVREHKDNIGSQYLLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHV 156
Query: 222 KVSDFGLAKLLGS-ESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
K++DFGLAKLLG+ E Y ++A E + +SDV+S+G+ + E+++ G
Sbjct: 157 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 216
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNA 339
P D P E++ I L+K +LP+ P + + ++ ++C +A
Sbjct: 217 SKPYD-GIPASEISSI--LEK-----------GERLPQPPICTI--DVYMIMVKCWMIDA 260
Query: 340 QKRPKMGHVV 349
RPK ++
Sbjct: 261 DSRPKFRELI 270
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 123/266 (46%), Gaps = 34/266 (12%)
Query: 105 KVAVKNLLNNRGQAEREFKV-EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLE 163
+VA++ + N + Q ++E + E+ + ++ N+V L G +V EY+ G+L
Sbjct: 47 EVAIRQM-NLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT 105
Query: 164 QWLH---GDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWN 220
+ D G + + E + L +LH +V+HRDIKS NIL+ +
Sbjct: 106 DVVTETCMDEGQIAAVCRE--------CLQALEFLHSN---QVIHRDIKSDNILLGMDGS 154
Query: 221 PKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGR 280
K++DFG + E S +T V GT ++APE + + D++S GI+ +E+I G
Sbjct: 155 VKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
Query: 281 IPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNAQ 340
P P + LI TN PE + PEK S + + L RC+D + +
Sbjct: 214 PPYLNENPLRALYLI------ATNGTPE----LQNPEK-LSAIFRDFL---NRCLDMDVE 259
Query: 341 KRPKMGHVVHMLEAQESPSKEPSNSF 366
KR G +L+ Q +P +S
Sbjct: 260 KR---GSAKELLQHQFLKIAKPLSSL 282
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 123/250 (49%), Gaps = 32/250 (12%)
Query: 106 VAVKNLLNNRG-QAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K L +A +E E + V + ++ RLLG C + L+ + + G L
Sbjct: 47 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLD 105
Query: 165 WL--HGD-VGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
++ H D +G L W +++ AKG++YL + ++VHRD+ + N+L+ +
Sbjct: 106 YVREHKDNIGSQYLLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHV 156
Query: 222 KVSDFGLAKLLGS-ESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
K++DFGLAKLLG+ E Y ++A E + +SDV+S+G+ + E+++ G
Sbjct: 157 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 216
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNA 339
P D P E++ I L+K +LP+ P + + ++ ++C +A
Sbjct: 217 SKPYD-GIPASEISSI--LEK-----------GERLPQPPICTI--DVYMIMVKCWMIDA 260
Query: 340 QKRPKMGHVV 349
RPK ++
Sbjct: 261 DSRPKFRELI 270
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 123/250 (49%), Gaps = 32/250 (12%)
Query: 106 VAVKNLLNNRG-QAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K L +A +E E + V + ++ RLLG C + L+ + + G L
Sbjct: 47 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLD 105
Query: 165 WL--HGD-VGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
++ H D +G L W +++ AKG++YL + ++VHRD+ + N+L+ +
Sbjct: 106 YVREHKDNIGSQYLLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHV 156
Query: 222 KVSDFGLAKLLGS-ESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
K++DFGLAKLLG+ E Y ++A E + +SDV+S+G+ + E+++ G
Sbjct: 157 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 216
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNA 339
P D P E++ I L+K +LP+ P + + ++ ++C +A
Sbjct: 217 SKPYD-GIPASEISSI--LEK-----------GERLPQPPICTI--DVYMIMVKCWMIDA 260
Query: 340 QKRPKMGHVV 349
RPK ++
Sbjct: 261 DSRPKFRELI 270
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 123/250 (49%), Gaps = 32/250 (12%)
Query: 106 VAVKNLLNNRG-QAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K L +A +E E + V + ++ RLLG C + L+ + + G L
Sbjct: 54 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLD 112
Query: 165 WL--HGD-VGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
++ H D +G L W +++ AKG++YL + ++VHRD+ + N+L+ +
Sbjct: 113 YVREHKDNIGSQYLLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHV 163
Query: 222 KVSDFGLAKLLGS-ESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
K++DFGLAKLLG+ E Y ++A E + +SDV+S+G+ + E+++ G
Sbjct: 164 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 223
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNA 339
P D P E++ I L+K +LP+ P + + ++ ++C +A
Sbjct: 224 SKPYD-GIPASEISSI--LEK-----------GERLPQPPICTI--DVYMIMVKCWMIDA 267
Query: 340 QKRPKMGHVV 349
RPK ++
Sbjct: 268 DSRPKFRELI 277
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 123/250 (49%), Gaps = 32/250 (12%)
Query: 106 VAVKNLLNNRG-QAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K L +A +E E + V + ++ RLLG C + L+ + + G L
Sbjct: 50 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLD 108
Query: 165 WL--HGD-VGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
++ H D +G L W +++ AKG++YL + ++VHRD+ + N+L+ +
Sbjct: 109 YVREHKDNIGSQYLLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHV 159
Query: 222 KVSDFGLAKLLGS-ESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
K++DFGLAKLLG+ E Y ++A E + +SDV+S+G+ + E+++ G
Sbjct: 160 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 219
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNA 339
P D P E++ I L+K +LP+ P + + ++ ++C +A
Sbjct: 220 SKPYD-GIPASEISSI--LEK-----------GERLPQPPICTI--DVYMIMVKCWMIDA 263
Query: 340 QKRPKMGHVV 349
RPK ++
Sbjct: 264 DSRPKFRELI 273
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 123/250 (49%), Gaps = 32/250 (12%)
Query: 106 VAVKNLLNNRG-QAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K L +A +E E + V + ++ RLLG C + L+ + + G L
Sbjct: 51 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLD 109
Query: 165 WL--HGD-VGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
++ H D +G L W +++ AKG++YL + ++VHRD+ + N+L+ +
Sbjct: 110 YVREHKDNIGSQYLLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHV 160
Query: 222 KVSDFGLAKLLGS-ESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
K++DFGLAKLLG+ E Y ++A E + +SDV+S+G+ + E+++ G
Sbjct: 161 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 220
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNA 339
P D P E++ I L+K +LP+ P + + ++ ++C +A
Sbjct: 221 SKPYD-GIPASEISSI--LEK-----------GERLPQPPICTI--DVYMIMVKCWMIDA 264
Query: 340 QKRPKMGHVV 349
RPK ++
Sbjct: 265 DSRPKFRELI 274
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 123/250 (49%), Gaps = 32/250 (12%)
Query: 106 VAVKNLLNNRG-QAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K L +A +E E + V + ++ RLLG C + L+ + + G L
Sbjct: 72 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLD 130
Query: 165 WL--HGD-VGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
++ H D +G L W +++ AKG++YL + ++VHRD+ + N+L+ +
Sbjct: 131 YVREHKDNIGSQYLLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHV 181
Query: 222 KVSDFGLAKLLGS-ESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
K++DFGLAKLLG+ E Y ++A E + +SDV+S+G+ + E+++ G
Sbjct: 182 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 241
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNA 339
P D P E++ I L+K +LP+ P + + ++ ++C +A
Sbjct: 242 SKPYD-GIPASEISSI--LEK-----------GERLPQPPICTI--DVYMIMVKCWMIDA 285
Query: 340 QKRPKMGHVV 349
RPK ++
Sbjct: 286 DSRPKFRELI 295
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 123/250 (49%), Gaps = 32/250 (12%)
Query: 106 VAVKNLLNNRG-QAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K L +A +E E + V + ++ RLLG C + L+ + + G L
Sbjct: 50 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLD 108
Query: 165 WL--HGD-VGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
++ H D +G L W +++ AKG++YL + ++VHRD+ + N+L+ +
Sbjct: 109 YVREHKDNIGSQYLLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHV 159
Query: 222 KVSDFGLAKLLGS-ESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
K++DFGLAKLLG+ E Y ++A E + +SDV+S+G+ + E+++ G
Sbjct: 160 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 219
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNA 339
P D P E++ I L+K +LP+ P + + ++ ++C +A
Sbjct: 220 SKPYD-GIPASEISSI--LEK-----------GERLPQPPICTI--DVYMIMVKCWMIDA 263
Query: 340 QKRPKMGHVV 349
RPK ++
Sbjct: 264 DSRPKFRELI 273
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 84/167 (50%), Gaps = 6/167 (3%)
Query: 117 QAEREFKV-EVEAIGRVRHKNLVRLLGYCAEGAHRML--VYEYVNNGNLEQWLHGDVGPC 173
+AE++ V EV + ++H N+VR + + L V EY G+L +
Sbjct: 46 EAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKER 105
Query: 174 SPLTWEIRMNIILGTAKGLSYLHEGLEP--KVVHRDIKSSNILIDKHWNPKVSDFGLAKL 231
L E + ++ L H + V+HRD+K +N+ +D N K+ DFGLA++
Sbjct: 106 QYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI 165
Query: 232 LGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS 278
L ++S+ V GT Y++PE + NE+SD++S G L+ E+ +
Sbjct: 166 LNHDTSFAKAFV-GTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 91/174 (52%), Gaps = 22/174 (12%)
Query: 120 REFKVEVEAIGRV-RHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHG----DVGPC- 173
R+F E+E + ++ H N++ LLG C + L EY +GNL +L + P
Sbjct: 60 RDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAF 119
Query: 174 -------SPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDF 226
S L+ + ++ A+G+ YL + + +HRD+ + NIL+ +++ K++DF
Sbjct: 120 AIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADF 176
Query: 227 GLAKLLGSESSYITTRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS 278
GL++ + Y+ + MG ++A E + + SDV+S+G+L+ E++S
Sbjct: 177 GLSR---GQEVYV-KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 123/250 (49%), Gaps = 32/250 (12%)
Query: 106 VAVKNLLNNRG-QAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K L +A +E E + V + ++ RLLG C + L+ + + G L
Sbjct: 49 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLD 107
Query: 165 WL--HGD-VGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
++ H D +G L W +++ AKG++YL + ++VHRD+ + N+L+ +
Sbjct: 108 YVREHKDNIGSQYLLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHV 158
Query: 222 KVSDFGLAKLLGS-ESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
K++DFGLAKLLG+ E Y ++A E + +SDV+S+G+ + E+++ G
Sbjct: 159 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 218
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNA 339
P D P E++ I L+K +LP+ P + + ++ ++C +A
Sbjct: 219 SKPYD-GIPASEISSI--LEK-----------GERLPQPPICTI--DVYMIMVKCWMIDA 262
Query: 340 QKRPKMGHVV 349
RPK ++
Sbjct: 263 DSRPKFRELI 272
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 101/197 (51%), Gaps = 16/197 (8%)
Query: 106 VAVKNLLNNRG-QAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
V +K + + G Q+ + + AIG + H ++VRLLG C G+ LV +Y+ G+L
Sbjct: 63 VCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQYLPLGSLLD 121
Query: 165 WLH---GDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
+ G +GP L W +++ AKG+ YL E +VHR++ + N+L+
Sbjct: 122 HVRQHRGALGPQLLLNWGVQI------AKGMYYLEEH---GMVHRNLAARNVLLKSPSQV 172
Query: 222 KVSDFGLAKLL-GSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
+V+DFG+A LL + + + ++A E G +SDV+S+G+ + E+++ G
Sbjct: 173 QVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFG 232
Query: 280 RIPVDYSRPPEEVNLIE 296
P R E +L+E
Sbjct: 233 AEPYAGLRLAEVPDLLE 249
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 123/250 (49%), Gaps = 32/250 (12%)
Query: 106 VAVKNLLNNRG-QAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K L +A +E E + V + ++ RLLG C + L+ + + G L
Sbjct: 50 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLD 108
Query: 165 WL--HGD-VGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
++ H D +G L W +++ AKG++YL + ++VHRD+ + N+L+ +
Sbjct: 109 YVREHKDNIGSQYLLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHV 159
Query: 222 KVSDFGLAKLLGS-ESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
K++DFGLAKLLG+ E Y ++A E + +SDV+S+G+ + E+++ G
Sbjct: 160 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 219
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNA 339
P D P E++ I L+K +LP+ P + + ++ ++C +A
Sbjct: 220 SKPYD-GIPASEISSI--LEK-----------GERLPQPPICTI--DVYMIMVKCWMIDA 263
Query: 340 QKRPKMGHVV 349
RPK ++
Sbjct: 264 DSRPKFRELI 273
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 123/250 (49%), Gaps = 32/250 (12%)
Query: 106 VAVKNLLNNRG-QAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K L +A +E E + V + ++ RLLG C + L+ + + G L
Sbjct: 47 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLD 105
Query: 165 WL--HGD-VGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
++ H D +G L W +++ AKG++YL + ++VHRD+ + N+L+ +
Sbjct: 106 YVREHKDNIGSQYLLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHV 156
Query: 222 KVSDFGLAKLLGS-ESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
K++DFGLAKLLG+ E Y ++A E + +SDV+S+G+ + E+++ G
Sbjct: 157 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 216
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNA 339
P D P E++ I L+K +LP+ P + + ++ ++C +A
Sbjct: 217 SKPYD-GIPASEISSI--LEK-----------GERLPQPPICTI--DVYMIMVKCWMIDA 260
Query: 340 QKRPKMGHVV 349
RPK ++
Sbjct: 261 DSRPKFRELI 270
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 123/250 (49%), Gaps = 32/250 (12%)
Query: 106 VAVKNLLNNRG-QAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K L +A +E E + V + ++ RLLG C + L+ + + G L
Sbjct: 53 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLD 111
Query: 165 WL--HGD-VGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
++ H D +G L W +++ AKG++YL + ++VHRD+ + N+L+ +
Sbjct: 112 YVREHKDNIGSQYLLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHV 162
Query: 222 KVSDFGLAKLLGS-ESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
K++DFGLAKLLG+ E Y ++A E + +SDV+S+G+ + E+++ G
Sbjct: 163 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 222
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNA 339
P D P E++ I L+K +LP+ P + + ++ ++C +A
Sbjct: 223 SKPYD-GIPASEISSI--LEK-----------GERLPQPPICTI--DVYMIMVKCWMIDA 266
Query: 340 QKRPKMGHVV 349
RPK ++
Sbjct: 267 DSRPKFRELI 276
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 91/174 (52%), Gaps = 22/174 (12%)
Query: 120 REFKVEVEAIGRV-RHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHG----DVGPC- 173
R+F E+E + ++ H N++ LLG C + L EY +GNL +L + P
Sbjct: 70 RDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAF 129
Query: 174 -------SPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDF 226
S L+ + ++ A+G+ YL + + +HRD+ + NIL+ +++ K++DF
Sbjct: 130 AIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADF 186
Query: 227 GLAKLLGSESSYITTRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS 278
GL++ + Y+ + MG ++A E + + SDV+S+G+L+ E++S
Sbjct: 187 GLSR---GQEVYV-KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 123/250 (49%), Gaps = 32/250 (12%)
Query: 106 VAVKNLLNNRG-QAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K L +A +E E + V + ++ RLLG C + L+ + + G L
Sbjct: 54 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLD 112
Query: 165 WL--HGD-VGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
++ H D +G L W +++ AKG++YL + ++VHRD+ + N+L+ +
Sbjct: 113 YVREHKDNIGSQYLLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHV 163
Query: 222 KVSDFGLAKLLGS-ESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
K++DFGLAKLLG+ E Y ++A E + +SDV+S+G+ + E+++ G
Sbjct: 164 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 223
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNA 339
P D P E++ I L+K +LP+ P + + ++ ++C +A
Sbjct: 224 SKPYD-GIPASEISSI--LEK-----------GERLPQPPICTI--DVYMIMVKCWMIDA 267
Query: 340 QKRPKMGHVV 349
RPK ++
Sbjct: 268 DSRPKFRELI 277
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 123/250 (49%), Gaps = 32/250 (12%)
Query: 106 VAVKNLLNNRG-QAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K L +A +E E + V + ++ RLLG C + L+ + + G L
Sbjct: 54 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLD 112
Query: 165 WL--HGD-VGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
++ H D +G L W +++ AKG++YL + ++VHRD+ + N+L+ +
Sbjct: 113 YVREHKDNIGSQYLLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHV 163
Query: 222 KVSDFGLAKLLGS-ESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
K++DFGLAKLLG+ E Y ++A E + +SDV+S+G+ + E+++ G
Sbjct: 164 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 223
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNA 339
P D P E++ I L+K +LP+ P + + ++ ++C +A
Sbjct: 224 SKPYD-GIPASEISSI--LEK-----------GERLPQPPICTI--DVYMIMVKCWMIDA 267
Query: 340 QKRPKMGHVV 349
RPK ++
Sbjct: 268 DSRPKFRELI 277
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 123/250 (49%), Gaps = 32/250 (12%)
Query: 106 VAVKNLLNNRG-QAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K L +A +E E + V + ++ RLLG C + L+ + + G L
Sbjct: 41 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLD 99
Query: 165 WL--HGD-VGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
++ H D +G L W +++ AKG++YL + ++VHRD+ + N+L+ +
Sbjct: 100 YVREHKDNIGSQYLLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHV 150
Query: 222 KVSDFGLAKLLGS-ESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
K++DFGLAKLLG+ E Y ++A E + +SDV+S+G+ + E+++ G
Sbjct: 151 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 210
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNA 339
P D P E++ I L+K +LP+ P + + ++ ++C +A
Sbjct: 211 SKPYD-GIPASEISSI--LEK-----------GERLPQPPICTI--DVYMIMVKCWMIDA 254
Query: 340 QKRPKMGHVV 349
RPK ++
Sbjct: 255 DSRPKFRELI 264
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 102/225 (45%), Gaps = 39/225 (17%)
Query: 135 KNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGD-VGPCSPLTWEIRMNIILGTAKGLS 193
+N V+ + + + + EY N L +H + + W + I+ + LS
Sbjct: 75 RNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQIL----EALS 130
Query: 194 YLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAK---------LLGSE----SSYIT 240
Y+H ++HRD+K NI ID+ N K+ DFGLAK L S+ SS
Sbjct: 131 YIHS---QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNL 187
Query: 241 TRVMGTFGYVAPEYAS-TGMLNERSDVYSFGILIMEVISGRIPVDYSRPPEEVNLIEWLK 299
T +GT YVA E TG NE+ D+YS GI+ E+I +S E VN+++ L+
Sbjct: 188 TSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI-----YPFSTGMERVNILKKLR 242
Query: 300 KMVTNRNPEGVLDPKLP-EKPTSRLLKRILLVALRCVDPNAQKRP 343
V+ P D K+ EK RLL +D + KRP
Sbjct: 243 S-VSIEFPPDFDDNKMKVEKKIIRLL----------IDHDPNKRP 276
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 101/197 (51%), Gaps = 16/197 (8%)
Query: 106 VAVKNLLNNRG-QAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
V +K + + G Q+ + + AIG + H ++VRLLG C G+ LV +Y+ G+L
Sbjct: 45 VCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQYLPLGSLLD 103
Query: 165 WLH---GDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
+ G +GP L W +++ AKG+ YL E +VHR++ + N+L+
Sbjct: 104 HVRQHRGALGPQLLLNWGVQI------AKGMYYLEEH---GMVHRNLAARNVLLKSPSQV 154
Query: 222 KVSDFGLAKLL-GSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
+V+DFG+A LL + + + ++A E G +SDV+S+G+ + E+++ G
Sbjct: 155 QVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFG 214
Query: 280 RIPVDYSRPPEEVNLIE 296
P R E +L+E
Sbjct: 215 AEPYAGLRLAEVPDLLE 231
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 94/193 (48%), Gaps = 21/193 (10%)
Query: 105 KVAVKNLLNNRGQAER-----EFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNN 159
KVAVK L NR + + K E++ + RH ++++L + +V EYV+
Sbjct: 38 KVAVKIL--NRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSG 95
Query: 160 GNLEQWL--HGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
G L ++ HG V E R + + Y H + VVHRD+K N+L+D
Sbjct: 96 GELFDYICKHGRVE-----EMEAR-RLFQQILSAVDYCHRHM---VVHRDLKPENVLLDA 146
Query: 218 HWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGML-NERSDVYSFGILIMEV 276
H N K++DFGL+ ++ S+ ++ G+ Y APE S + D++S G+++ +
Sbjct: 147 HMNAKIADFGLSNMM-SDGEFLRDSC-GSPNYAAPEVISGRLYAGPEVDIWSCGVILYAL 204
Query: 277 ISGRIPVDYSRPP 289
+ G +P D P
Sbjct: 205 LCGTLPFDDEHVP 217
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 95/187 (50%), Gaps = 16/187 (8%)
Query: 105 KVAVKNLLNNRGQAERE-FKVEVEAIGRV-RHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
KVAVK L + E+E E++ + + +H+N+V LLG C G +++ EY G+L
Sbjct: 78 KVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137
Query: 163 EQWLHG-----DVGPC-----SPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSN 212
+L + P S L+ ++ A+G+++L +HRD+ + N
Sbjct: 138 LNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLAS---KNCIHRDVAARN 194
Query: 213 ILIDKHWNPKVSDFGLAKLLGSESSYITT-RVMGTFGYVAPEYASTGMLNERSDVYSFGI 271
+L+ K+ DFGLA+ + ++S+YI ++APE + +SDV+S+GI
Sbjct: 195 VLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGI 254
Query: 272 LIMEVIS 278
L+ E+ S
Sbjct: 255 LLWEIFS 261
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 96/198 (48%), Gaps = 27/198 (13%)
Query: 104 SKVAVKNLLNNRGQAE-REFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
+ VAVK L N +E R+ E + +V H ++++L G C++ +L+ EY G+L
Sbjct: 54 TTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSL 113
Query: 163 EQWLHGD--VGPC------------------SPLTWEIRMNIILGTAKGLSYLHEGLEPK 202
+L VGP LT ++ ++G+ YL E
Sbjct: 114 RGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---S 170
Query: 203 VVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTF--GYVAPEYASTGML 260
+VHRD+ + NIL+ + K+SDFGL++ + E S + R G ++A E +
Sbjct: 171 LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV-KRSQGRIPVKWMAIESLFDHIY 229
Query: 261 NERSDVYSFGILIMEVIS 278
+SDV+SFG+L+ E+++
Sbjct: 230 TTQSDVWSFGVLLWEIVT 247
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 88/185 (47%), Gaps = 15/185 (8%)
Query: 106 VAVKNLLNNRGQAE-REFKVEVEAIGRV-RHKNLVRLLGYCAE-GAHRMLVYEYVNNGNL 162
VAVK L +E R E++ + + H N+V LLG C + G M++ E+ GNL
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 163 EQWLHGDVGPCSP--------LTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNIL 214
+L P LT E + AKG+ +L K +HRD+ + NIL
Sbjct: 120 STYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLASR---KXIHRDLAARNIL 176
Query: 215 IDKHWNPKVSDFGLAKLLGSESSYITT-RVMGTFGYVAPEYASTGMLNERSDVYSFGILI 273
+ + K+ DFGLA+ + + Y+ ++APE + +SDV+SFG+L+
Sbjct: 177 LSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL 236
Query: 274 MEVIS 278
E+ S
Sbjct: 237 WEIFS 241
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 88/185 (47%), Gaps = 15/185 (8%)
Query: 106 VAVKNLLNNRGQAE-REFKVEVEAIGRV-RHKNLVRLLGYCAE-GAHRMLVYEYVNNGNL 162
VAVK L +E R E++ + + H N+V LLG C + G M++ E+ GNL
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 163 EQWLHGDVGPCSP--------LTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNIL 214
+L P LT E + AKG+ +L K +HRD+ + NIL
Sbjct: 120 STYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFLASR---KXIHRDLAARNIL 176
Query: 215 IDKHWNPKVSDFGLAKLLGSESSYITT-RVMGTFGYVAPEYASTGMLNERSDVYSFGILI 273
+ + K+ DFGLA+ + + Y+ ++APE + +SDV+SFG+L+
Sbjct: 177 LSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL 236
Query: 274 MEVIS 278
E+ S
Sbjct: 237 WEIFS 241
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 128/274 (46%), Gaps = 33/274 (12%)
Query: 104 SKVAVKNLLNNRGQAER-EFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
++VAVK + + ER EF E + ++VRLLG ++G ++V E + +G+L
Sbjct: 48 TRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDL 107
Query: 163 EQWLH-----GDVGPCSPL-TWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILID 216
+ +L + P P T + + + A G++YL+ K VHRD+ + N ++
Sbjct: 108 KSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCMVA 164
Query: 217 KHWNPKVSDFGLAKLLGSESSYITTRVMGTFG--YVAPEYASTGMLNERSDVYSFGILIM 274
+ K+ DFG+ + + E++Y G ++APE G+ SD++SFG+++
Sbjct: 165 HDFTVKIGDFGMTRDI-YETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLW 223
Query: 275 EVISGRIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLD--PKLPEKPTSRLLKRILLVAL 332
E+ S + P + E + K V + G LD PE+ T L R+
Sbjct: 224 EITS------LAEQPYQGLSNEQVLKFVMD---GGYLDQPDNCPERVTD--LMRM----- 267
Query: 333 RCVDPNAQKRPKMGHVVHMLEAQESPSKEPSNSF 366
C N + RP +V++L+ PS P SF
Sbjct: 268 -CWQFNPKMRPTFLEIVNLLKDDLHPSF-PEVSF 299
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 83/183 (45%), Gaps = 17/183 (9%)
Query: 105 KVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
KV K+ L G E + + E+E +RH N++R+ Y + L+ E+ G L +
Sbjct: 45 KVLFKSQLEKEG-VEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYK 103
Query: 165 WL--HGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
L HG T+ + A L Y HE KV+HRDIK N+L+ K
Sbjct: 104 ELQKHGRFDEQRSATF------MEELADALHYCHER---KVIHRDIKPENLLMGYKGELK 154
Query: 223 VSDFGLAKLLGSESSYITTRVM-GTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRI 281
++DFG + + + R M GT Y+ PE +E+ D++ G+L E + G
Sbjct: 155 IADFGWS----VHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMP 210
Query: 282 PVD 284
P D
Sbjct: 211 PFD 213
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 128/282 (45%), Gaps = 32/282 (11%)
Query: 104 SKVAVKNLLNNRGQAER-EFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
++VAVK + + ER EF E + ++VRLLG ++G ++V E + +G+L
Sbjct: 47 TRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDL 106
Query: 163 EQWLH-----GDVGPCSPL-TWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILID 216
+ +L + P P T + + + A G++YL+ K VHRD+ + N ++
Sbjct: 107 KSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCMVA 163
Query: 217 KHWNPKVSDFGLAKLLGSESSYITTRVMGTFG--YVAPEYASTGMLNERSDVYSFGILIM 274
+ K+ DFG+ + + E+ Y G ++APE G+ SD++SFG+++
Sbjct: 164 HDFTVKIGDFGMTRDI-YETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLW 222
Query: 275 EVISGRIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLD--PKLPEKPTSRLLKRILLVAL 332
E+ S + P + E + K V + G LD PE+ T L R+
Sbjct: 223 EITS------LAEQPYQGLSNEQVLKFVMD---GGYLDQPDNCPERVTD--LMRM----- 266
Query: 333 RCVDPNAQKRPKMGHVVHMLEAQESPSKEPSNSFQDRYRASP 374
C N + RP +V++L+ PS + F +P
Sbjct: 267 -CWQFNPKMRPTFLEIVNLLKDDLHPSFPEVSFFHSEENKAP 307
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 95/196 (48%), Gaps = 25/196 (12%)
Query: 105 KVAVKNLLNNRGQAERE-FKVEVEAIGRV-RHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
KVAVK L + E+E E++ + + +H+N+V LLG C G +++ EY G+L
Sbjct: 63 KVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 122
Query: 163 EQWLH----GDVGPC---------------SPLTWEIRMNIILGTAKGLSYLHEGLEPKV 203
+L +GP PL ++ A+G+++L
Sbjct: 123 LNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLAS---KNC 179
Query: 204 VHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITT-RVMGTFGYVAPEYASTGMLNE 262
+HRD+ + N+L+ K+ DFGLA+ + ++S+YI ++APE +
Sbjct: 180 IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTV 239
Query: 263 RSDVYSFGILIMEVIS 278
+SDV+S+GIL+ E+ S
Sbjct: 240 QSDVWSYGILLWEIFS 255
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 83/183 (45%), Gaps = 17/183 (9%)
Query: 105 KVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
KV K+ L G E + + E+E +RH N++R+ Y + L+ E+ G L +
Sbjct: 45 KVLFKSQLEKEG-VEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYK 103
Query: 165 WL--HGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
L HG T+ + A L Y HE KV+HRDIK N+L+ K
Sbjct: 104 ELQKHGRFDEQRSATFMEEL------ADALHYCHER---KVIHRDIKPENLLMGYKGELK 154
Query: 223 VSDFGLAKLLGSESSYITTRVM-GTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRI 281
++DFG + + + R M GT Y+ PE +E+ D++ G+L E + G
Sbjct: 155 IADFGWS----VHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMP 210
Query: 282 PVD 284
P D
Sbjct: 211 PFD 213
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 83/183 (45%), Gaps = 17/183 (9%)
Query: 105 KVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
KV K+ L G E + + E+E +RH N++R+ Y + L+ E+ G L +
Sbjct: 46 KVLFKSQLEKEG-VEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYK 104
Query: 165 WL--HGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
L HG T+ + A L Y HE KV+HRDIK N+L+ K
Sbjct: 105 ELQKHGRFDEQRSATFMEEL------ADALHYCHER---KVIHRDIKPENLLMGYKGELK 155
Query: 223 VSDFGLAKLLGSESSYITTRVM-GTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRI 281
++DFG + + + R M GT Y+ PE +E+ D++ G+L E + G
Sbjct: 156 IADFGWS----VHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMP 211
Query: 282 PVD 284
P D
Sbjct: 212 PFD 214
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 87/165 (52%), Gaps = 21/165 (12%)
Query: 152 LVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSS 211
+ E+++ G+L+Q L + +I + + KGL+YL E + K++HRD+K S
Sbjct: 84 ICMEHMDGGSLDQVLK----KAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPS 137
Query: 212 NILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGI 271
NIL++ K+ DFG++ L E + +GT Y++PE + +SD++S G+
Sbjct: 138 NILVNSRGEIKLCDFGVSGQLIDE---MANEFVGTRSYMSPERLQGTHYSVQSDIWSMGL 194
Query: 272 LIMEVISGRIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLP 316
++E+ GR Y RPP + + E L +V N P PKLP
Sbjct: 195 SLVEMAVGR----YPRPP--MAIFELLDYIV-NEPP-----PKLP 227
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 20/204 (9%)
Query: 115 RGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCS 174
R Q RE +V E +V G + E+++ G+L+Q L
Sbjct: 48 RNQIIRELQVLHEC----NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK----KAG 99
Query: 175 PLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGS 234
+ +I + + KGL+YL E + K++HRD+K SNIL++ K+ DFG++ G
Sbjct: 100 RIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS---GQ 154
Query: 235 ESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPV------DYSRP 288
+ +GT Y++PE + +SD++S G+ ++E+ GR P+ + SRP
Sbjct: 155 LIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRP 214
Query: 289 PEEV-NLIEWLKKMVTNRNPEGVL 311
P + L++++ + P GV
Sbjct: 215 PMAIFELLDYIVNEPPPKLPSGVF 238
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 88/189 (46%), Gaps = 19/189 (10%)
Query: 106 VAVKNLLNNRGQAE-REFKVEVEAIGRV-RHKNLVRLLGYCAE-GAHRMLVYEYVNNGNL 162
VAVK L +E R E++ + + H N+V LLG C + G M++ E+ GNL
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 163 EQWLHGDVGPCSP------------LTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKS 210
+L P LT E + AKG+ +L K +HRD+ +
Sbjct: 120 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAA 176
Query: 211 SNILIDKHWNPKVSDFGLAKLLGSESSYITT-RVMGTFGYVAPEYASTGMLNERSDVYSF 269
NIL+ + K+ DFGLA+ + + Y+ ++APE + +SDV+SF
Sbjct: 177 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 236
Query: 270 GILIMEVIS 278
G+L+ E+ S
Sbjct: 237 GVLLWEIFS 245
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 127/274 (46%), Gaps = 33/274 (12%)
Query: 104 SKVAVKNLLNNRGQAER-EFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
++VAVK + + ER EF E + ++VRLLG ++G ++V E + +G+L
Sbjct: 48 TRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDL 107
Query: 163 EQWLH-----GDVGPCSPL-TWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILID 216
+ +L + P P T + + + A G++YL+ K VHRD+ + N ++
Sbjct: 108 KSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCMVA 164
Query: 217 KHWNPKVSDFGLAKLLGSESSYITTRVMGTFG--YVAPEYASTGMLNERSDVYSFGILIM 274
+ K+ DFG+ + + E+ Y G ++APE G+ SD++SFG+++
Sbjct: 165 HDFTVKIGDFGMTRDI-YETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLW 223
Query: 275 EVISGRIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLD--PKLPEKPTSRLLKRILLVAL 332
E+ S + P + E + K V + G LD PE+ T L R+
Sbjct: 224 EITS------LAEQPYQGLSNEQVLKFVMD---GGYLDQPDNCPERVTD--LMRM----- 267
Query: 333 RCVDPNAQKRPKMGHVVHMLEAQESPSKEPSNSF 366
C N + RP +V++L+ PS P SF
Sbjct: 268 -CWQFNPKMRPTFLEIVNLLKDDLHPSF-PEVSF 299
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 88/189 (46%), Gaps = 19/189 (10%)
Query: 106 VAVKNLLNNRGQAE-REFKVEVEAIGRV-RHKNLVRLLGYCAE-GAHRMLVYEYVNNGNL 162
VAVK L +E R E++ + + H N+V LLG C + G M++ E+ GNL
Sbjct: 62 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 121
Query: 163 EQWLHGDVGPCSP------------LTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKS 210
+L P LT E + AKG+ +L K +HRD+ +
Sbjct: 122 STYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAA 178
Query: 211 SNILIDKHWNPKVSDFGLAKLLGSESSYITT-RVMGTFGYVAPEYASTGMLNERSDVYSF 269
NIL+ + K+ DFGLA+ + + Y+ ++APE + +SDV+SF
Sbjct: 179 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 238
Query: 270 GILIMEVIS 278
G+L+ E+ S
Sbjct: 239 GVLLWEIFS 247
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 91/174 (52%), Gaps = 8/174 (4%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E+ + ++H+N+VRL LV+E+++N +L++++ +P E+ +
Sbjct: 53 EISLMKELKHENIVRLYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVK 111
Query: 185 ILG--TAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTR 242
+GL++ HE K++HRD+K N+LI+K K+ DFGLA+ G + ++
Sbjct: 112 YFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSE 168
Query: 243 VMGTFGYVAPEYASTGMLNERS-DVYSFGILIMEVISGRIPVDYSRPPEEVNLI 295
V+ T Y AP+ S D++S G ++ E+I+G+ + E++ LI
Sbjct: 169 VV-TLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLI 221
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 123/266 (46%), Gaps = 34/266 (12%)
Query: 105 KVAVKNLLNNRGQAEREFKV-EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLE 163
+VA++ + N + Q ++E + E+ + ++ N+V L G +V EY+ G+L
Sbjct: 47 EVAIRQM-NLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT 105
Query: 164 QWLH---GDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWN 220
+ D G + + E + L +LH +V+HRDIKS NIL+ +
Sbjct: 106 DVVTETCMDEGQIAAVCRE--------CLQALEFLHSN---QVIHRDIKSDNILLGMDGS 154
Query: 221 PKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGR 280
K++DFG + E S + ++GT ++APE + + D++S GI+ +E+I G
Sbjct: 155 VKLTDFGFCAQITPEQSK-RSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
Query: 281 IPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNAQ 340
P P + LI TN PE + PEK S + + L RC+D + +
Sbjct: 214 PPYLNENPLRALYLI------ATNGTPE----LQNPEK-LSAIFRDFL---NRCLDMDVE 259
Query: 341 KRPKMGHVVHMLEAQESPSKEPSNSF 366
KR G +L+ Q +P +S
Sbjct: 260 KR---GSAKELLQHQFLKIAKPLSSL 282
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 122/250 (48%), Gaps = 32/250 (12%)
Query: 106 VAVKNLLNNRG-QAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K L +A +E E + V + ++ RLLG C + L+ + + G L
Sbjct: 57 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLD 115
Query: 165 WL--HGD-VGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
++ H D +G L W +++ AKG++YL + ++VHRD+ + N+L+ +
Sbjct: 116 YVREHKDNIGSQYLLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHV 166
Query: 222 KVSDFGLAKLLGS-ESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
K++DFGLAKLLG+ E Y ++A E + +SDV+S+G+ + E+++ G
Sbjct: 167 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 226
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNA 339
P D P E++ I L+K +LP+ P + + ++ +C +A
Sbjct: 227 SKPYD-GIPASEISSI--LEK-----------GERLPQPPICTI--DVYMIMRKCWMIDA 270
Query: 340 QKRPKMGHVV 349
RPK ++
Sbjct: 271 DSRPKFRELI 280
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 118/238 (49%), Gaps = 31/238 (13%)
Query: 117 QAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWL--HGD-VGPC 173
+A +E E + V + ++ RLLG C + L+ + + G L ++ H D +G
Sbjct: 93 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ 151
Query: 174 SPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLG 233
L W +++ AKG++YL + ++VHRD+ + N+L+ + K++DFGLAKLLG
Sbjct: 152 YLLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 202
Query: 234 S-ESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRIPVDYSRPPEE 291
+ E Y ++A E + +SDV+S+G+ + E+++ G P D P E
Sbjct: 203 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 261
Query: 292 VNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNAQKRPKMGHVV 349
++ I L+K +LP+ P + + ++ ++C +A RPK ++
Sbjct: 262 ISSI--LEK-----------GERLPQPPICTI--DVYMIMVKCWMIDADSRPKFRELI 304
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 93/185 (50%), Gaps = 19/185 (10%)
Query: 117 QAEREFKVEVEAIGRV-RHKNLVRLLGYCAEGAHRMLVYEYVNNGNL-EQWLHGDVGPCS 174
+++R+ E+E + R +H N++ L +G H LV E + G L ++ L
Sbjct: 62 KSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILR------Q 115
Query: 175 PLTWEIRMNIILGT-AKGLSYLHEGLEPKVVHRDIKSSNIL-IDKHWNP---KVSDFGLA 229
E + +L T K + YLH VVHRD+K SNIL +D+ NP ++ DFG A
Sbjct: 116 KFFSEREASFVLHTIGKTVEYLHS---QGVVHRDLKPSNILYVDESGNPECLRICDFGFA 172
Query: 230 KLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVDY--SR 287
K L +E+ + T T +VAPE +E D++S GIL+ +++G P S
Sbjct: 173 KQLRAENGLLMTPCY-TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSD 231
Query: 288 PPEEV 292
PEE+
Sbjct: 232 TPEEI 236
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 129/276 (46%), Gaps = 42/276 (15%)
Query: 103 NSKVAVKNL-LNNRG--QAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHR----MLVYE 155
N VAVK L ++ Q+ERE + + ++H+NL++ + G++ L+
Sbjct: 38 NDFVAVKIFPLQDKQSWQSERE----IFSTPGMKHENLLQFIAAEKRGSNLEVELWLITA 93
Query: 156 YVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHE--------GLEPKVVHRD 207
+ + G+L +L G++ +TW ++ ++GLSYLHE G +P + HRD
Sbjct: 94 FHDKGSLTDYLKGNI-----ITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRD 148
Query: 208 IKSSNILIDKHWNPKVSDFGLA-KLLGSESSYITTRVMGTFGYVAPEYASTGMLNERS-- 264
KS N+L+ ++DFGLA + + T +GT Y+APE + +R
Sbjct: 149 FKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVLEGAINFQRDAF 208
Query: 265 ---DVYSFGILIMEVIS----GRIPVDYSRPPEEVNL-----IEWLKKMVTNRNPEGVLD 312
D+Y+ G+++ E++S PVD P E + +E L+++V ++ +
Sbjct: 209 LRIDMYAMGLVLWELVSRCKAADGPVDEYMLPFEEEIGQHPSLEELQEVVVHKKMRPTIK 268
Query: 313 PKLPEKPTSRLLKRILLVALRCVDPNAQKRPKMGHV 348
+ P L ++ + C D +A+ R G V
Sbjct: 269 DHWLKHPG---LAQLCVTIEECWDHDAEARLSAGCV 301
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 122/250 (48%), Gaps = 32/250 (12%)
Query: 106 VAVKNLLNNRG-QAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K L +A +E E + V + ++ RLLG C + L+ + + G L
Sbjct: 50 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLD 108
Query: 165 WL--HGD-VGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
++ H D +G L W +++ AKG++YL + ++VHRD+ + N+L+ +
Sbjct: 109 YVREHKDNIGSQYLLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHV 159
Query: 222 KVSDFGLAKLLGS-ESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
K++DFGLAKLLG+ E Y ++A E + +SDV+S+G+ + E+++ G
Sbjct: 160 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 219
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNA 339
P D P E++ I L+K +LP+ P + + ++ +C +A
Sbjct: 220 SKPYD-GIPASEISSI--LEK-----------GERLPQPPICTI--DVYMIMRKCWMIDA 263
Query: 340 QKRPKMGHVV 349
RPK ++
Sbjct: 264 DSRPKFRELI 273
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 93/185 (50%), Gaps = 19/185 (10%)
Query: 117 QAEREFKVEVEAIGRV-RHKNLVRLLGYCAEGAHRMLVYEYVNNGNL-EQWLHGDVGPCS 174
+++R+ E+E + R +H N++ L +G H LV E + G L ++ L
Sbjct: 62 KSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILR------Q 115
Query: 175 PLTWEIRMNIILGT-AKGLSYLHEGLEPKVVHRDIKSSNIL-IDKHWNP---KVSDFGLA 229
E + +L T K + YLH VVHRD+K SNIL +D+ NP ++ DFG A
Sbjct: 116 KFFSEREASFVLHTIGKTVEYLHS---QGVVHRDLKPSNILYVDESGNPECLRICDFGFA 172
Query: 230 KLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVDY--SR 287
K L +E+ + T T +VAPE +E D++S GIL+ +++G P S
Sbjct: 173 KQLRAENGLLMTPCY-TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSD 231
Query: 288 PPEEV 292
PEE+
Sbjct: 232 TPEEI 236
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 88/189 (46%), Gaps = 19/189 (10%)
Query: 106 VAVKNLLNNRGQAE-REFKVEVEAIGRV-RHKNLVRLLGYCAE-GAHRMLVYEYVNNGNL 162
VAVK L +E R E++ + + H N+V LLG C + G M++ E+ GNL
Sbjct: 97 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 156
Query: 163 EQWLHGDVGPCSP------------LTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKS 210
+L P LT E + AKG+ +L K +HRD+ +
Sbjct: 157 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAA 213
Query: 211 SNILIDKHWNPKVSDFGLAKLLGSESSYITT-RVMGTFGYVAPEYASTGMLNERSDVYSF 269
NIL+ + K+ DFGLA+ + + Y+ ++APE + +SDV+SF
Sbjct: 214 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 273
Query: 270 GILIMEVIS 278
G+L+ E+ S
Sbjct: 274 GVLLWEIFS 282
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 88/189 (46%), Gaps = 19/189 (10%)
Query: 106 VAVKNLLNNRGQAE-REFKVEVEAIGRV-RHKNLVRLLGYCAE-GAHRMLVYEYVNNGNL 162
VAVK L +E R E++ + + H N+V LLG C + G M++ E+ GNL
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNL 110
Query: 163 EQWLHGDVGPCSP------------LTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKS 210
+L P LT E + AKG+ +L K +HRD+ +
Sbjct: 111 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAA 167
Query: 211 SNILIDKHWNPKVSDFGLAKLLGSESSYITT-RVMGTFGYVAPEYASTGMLNERSDVYSF 269
NIL+ + K+ DFGLA+ + + Y+ ++APE + +SDV+SF
Sbjct: 168 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 227
Query: 270 GILIMEVIS 278
G+L+ E+ S
Sbjct: 228 GVLLWEIFS 236
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 88/189 (46%), Gaps = 19/189 (10%)
Query: 106 VAVKNLLNNRGQAE-REFKVEVEAIGRV-RHKNLVRLLGYCAE-GAHRMLVYEYVNNGNL 162
VAVK L +E R E++ + + H N+V LLG C + G M++ E+ GNL
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNL 110
Query: 163 EQWLHGDVGPCSP------------LTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKS 210
+L P LT E + AKG+ +L K +HRD+ +
Sbjct: 111 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAA 167
Query: 211 SNILIDKHWNPKVSDFGLAKLLGSESSYITT-RVMGTFGYVAPEYASTGMLNERSDVYSF 269
NIL+ + K+ DFGLA+ + + Y+ ++APE + +SDV+SF
Sbjct: 168 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 227
Query: 270 GILIMEVIS 278
G+L+ E+ S
Sbjct: 228 GVLLWEIFS 236
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 122/250 (48%), Gaps = 32/250 (12%)
Query: 106 VAVKNLLNNRG-QAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K L +A +E E + V + ++ RLLG C + L+ + + G L
Sbjct: 47 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLD 105
Query: 165 WL--HGD-VGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
++ H D +G L W +++ AKG++YL + ++VHRD+ + N+L+ +
Sbjct: 106 YVREHKDNIGSQYLLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHV 156
Query: 222 KVSDFGLAKLLGS-ESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
K++DFGLAKLLG+ E Y ++A E + +SDV+S+G+ + E+++ G
Sbjct: 157 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 216
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNA 339
P D P E++ I L+K +LP+ P + + ++ +C +A
Sbjct: 217 SKPYD-GIPASEISSI--LEK-----------GERLPQPPICTI--DVYMIMRKCWMIDA 260
Query: 340 QKRPKMGHVV 349
RPK ++
Sbjct: 261 DSRPKFRELI 270
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 88/186 (47%), Gaps = 12/186 (6%)
Query: 105 KVAVKNLLNNRGQAEREFKV-EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLE 163
+VAVK + + R Q RE EV + H N+V + G +V E++ G L
Sbjct: 72 QVAVKKM-DLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALT 130
Query: 164 QWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKV 223
D+ + + E + L + LSYLH V+HRDIKS +IL+ K+
Sbjct: 131 -----DIVTHTRMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKL 182
Query: 224 SDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPV 283
SDFG + E ++GT ++APE S D++S GI+++E+I G P
Sbjct: 183 SDFGFCAQVSKEVPK-RKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPY 241
Query: 284 DYSRPP 289
++ PP
Sbjct: 242 -FNEPP 246
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 123/250 (49%), Gaps = 32/250 (12%)
Query: 106 VAVKNLLNNRG-QAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K L +A +E E + V + ++ RLLG C + L+ + + G L
Sbjct: 44 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLD 102
Query: 165 WL--HGD-VGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
++ H D +G L W +++ A+G++YL + ++VHRD+ + N+L+ +
Sbjct: 103 YVREHKDNIGSQYLLNWCVQI------AEGMNYLEDR---RLVHRDLAARNVLVKTPQHV 153
Query: 222 KVSDFGLAKLLGS-ESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
K++DFGLAKLLG+ E Y ++A E + +SDV+S+G+ + E+++ G
Sbjct: 154 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 213
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNA 339
P D P E++ I L+K +LP+ P + + ++ ++C +A
Sbjct: 214 SKPYD-GIPASEISSI--LEK-----------GERLPQPPICTI--DVYMIMVKCWMIDA 257
Query: 340 QKRPKMGHVV 349
RPK ++
Sbjct: 258 DSRPKFRELI 267
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 92/189 (48%), Gaps = 18/189 (9%)
Query: 105 KVAVKNLLNNRGQAERE-FKVEVEAIGRV-RHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
KVAVK L + E+E E++ + + +H+N+V LLG C G +++ EY G+L
Sbjct: 78 KVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137
Query: 163 EQWLHGDVGPCSPLTWEIRMN------------IILGTAKGLSYLHEGLEPKVVHRDIKS 210
+L P ++ N A+G+++L +HRD+ +
Sbjct: 138 LNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFL---ASKNCIHRDVAA 194
Query: 211 SNILIDKHWNPKVSDFGLAKLLGSESSYITT-RVMGTFGYVAPEYASTGMLNERSDVYSF 269
N+L+ K+ DFGLA+ + ++S+YI ++APE + +SDV+S+
Sbjct: 195 RNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSY 254
Query: 270 GILIMEVIS 278
GIL+ E+ S
Sbjct: 255 GILLWEIFS 263
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 86/182 (47%), Gaps = 14/182 (7%)
Query: 102 DNSKVAVKNLLNNRG-QAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNG 160
DN+ VAVK+ + +F E + + H N+VRL+G C + +V E V G
Sbjct: 138 DNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG 197
Query: 161 NLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWN 220
+ +L + + L + + ++ A G+ YL +HRD+ + N L+ +
Sbjct: 198 DFLTFLRTE---GARLRVKTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNV 251
Query: 221 PKVSDFGLAKLLGSESSYITTRVMGT----FGYVAPEYASTGMLNERSDVYSFGILIMEV 276
K+SDFG+++ E+ + G + APE + G + SDV+SFGIL+ E
Sbjct: 252 LKISDFGMSR---EEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWET 308
Query: 277 IS 278
S
Sbjct: 309 FS 310
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 116/244 (47%), Gaps = 19/244 (7%)
Query: 105 KVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
KV + +L++ + +A+ E++ + ++ H N+++ E +V E + G+L +
Sbjct: 64 KVQIFDLMDAKARAD--CIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSR 121
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
+ + + L ++H +V+HRDIK +N+ I K+
Sbjct: 122 MIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLG 178
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVD 284
D GL + S+++ + V GT Y++PE N +SD++S G L+ E+ + + P
Sbjct: 179 DLGLGRFFSSKTTAAHSLV-GTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPF- 236
Query: 285 YSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNAQKRPK 344
Y +++NL KK+ E P LP S L++++ + C++P+ +KRP
Sbjct: 237 YG---DKMNLYSLCKKI------EQCDYPPLPSDHYSEELRQLVNM---CINPDPEKRPD 284
Query: 345 MGHV 348
+ +V
Sbjct: 285 VTYV 288
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 102/232 (43%), Gaps = 20/232 (8%)
Query: 57 VPEVSHLGWGHWYTLRELEVSTNGFSDDKXXXXXXXXXXXXXXXXDNSKVAVKNLLNNRG 116
P + LG+G W E+ + K VA+K ++
Sbjct: 8 APSTAGLGYGSW------EIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIK-MIKEGS 60
Query: 117 QAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPL 176
+E EF E + + + H+ LV+L G C + ++ EY+ NG L +L +
Sbjct: 61 MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLR-------EM 113
Query: 177 TWEIRMNIILGTAKGLSYLHEGLEPK-VVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSE 235
+ +L K + E LE K +HRD+ + N L++ KVSDFGL++ + +
Sbjct: 114 RHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD 173
Query: 236 SSYITTRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRIPVD 284
T+ V F + PE + +SD+++FG+L+ E+ S G++P +
Sbjct: 174 EE--TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 223
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 91/174 (52%), Gaps = 22/174 (12%)
Query: 120 REFKVEVEAIGRV-RHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHG----DVGPC- 173
R+F E+E + ++ H N++ LLG C + L EY +GNL +L + P
Sbjct: 67 RDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAF 126
Query: 174 -------SPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDF 226
S L+ + ++ A+G+ YL + + +HR++ + NIL+ +++ K++DF
Sbjct: 127 AIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRNLAARNILVGENYVAKIADF 183
Query: 227 GLAKLLGSESSYITTRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS 278
GL++ + Y+ + MG ++A E + + SDV+S+G+L+ E++S
Sbjct: 184 GLSR---GQEVYV-KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 95/187 (50%), Gaps = 16/187 (8%)
Query: 105 KVAVKNLLNNRGQAERE-FKVEVEAIGRV-RHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
KVAVK L + E+E E++ + + +H+N+V LLG C G +++ EY G+L
Sbjct: 78 KVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137
Query: 163 EQWLHG-----DVGPCSPL---TWEIR--MNIILGTAKGLSYLHEGLEPKVVHRDIKSSN 212
+L + P + T R ++ A+G+++L +HRD+ + N
Sbjct: 138 LNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLAS---KNCIHRDVAARN 194
Query: 213 ILIDKHWNPKVSDFGLAKLLGSESSYITT-RVMGTFGYVAPEYASTGMLNERSDVYSFGI 271
+L+ K+ DFGLA+ + ++S+YI ++APE + +SDV+S+GI
Sbjct: 195 VLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGI 254
Query: 272 LIMEVIS 278
L+ E+ S
Sbjct: 255 LLWEIFS 261
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 96/185 (51%), Gaps = 15/185 (8%)
Query: 102 DNS--KVAVKNLL-NNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAE--GAHRMLVYEY 156
DN+ +VAVK+L + G + K E+E + + H+N+V+ G C E G L+ E+
Sbjct: 47 DNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEF 106
Query: 157 VNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILID 216
+ +G+L+++L + + + + ++ + KG+ YL + VHRD+ + N+L++
Sbjct: 107 LPSGSLKEYLPKNK---NKINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVE 160
Query: 217 KHWNPKVSDFGLAKLLGSESSYITT---RVMGTFGYVAPEYASTGMLNERSDVYSFGILI 273
K+ DFGL K + ++ T R F Y APE SDV+SFG+ +
Sbjct: 161 SEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECLMQSKFYIASDVWSFGVTL 219
Query: 274 MEVIS 278
E+++
Sbjct: 220 HELLT 224
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 91/183 (49%), Gaps = 14/183 (7%)
Query: 106 VAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQW 165
VA+K ++ +E EF E + + + H+ LV+L G C + ++ EY+ NG L +
Sbjct: 31 VAIK-MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNY 89
Query: 166 LHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPK-VVHRDIKSSNILIDKHWNPKVS 224
L + + +L K + E LE K +HRD+ + N L++ KVS
Sbjct: 90 LR-------EMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVS 142
Query: 225 DFGLAKLLGSESSYITTRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRI 281
DFGL++ + + T+ V F + PE + +SD+++FG+L+ E+ S G++
Sbjct: 143 DFGLSRYVLDDE--YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKM 200
Query: 282 PVD 284
P +
Sbjct: 201 PYE 203
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 91/183 (49%), Gaps = 14/183 (7%)
Query: 106 VAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQW 165
VA+K ++ +E EF E + + + H+ LV+L G C + ++ EY+ NG L +
Sbjct: 35 VAIK-MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNY 93
Query: 166 LHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPK-VVHRDIKSSNILIDKHWNPKVS 224
L + + +L K + E LE K +HRD+ + N L++ KVS
Sbjct: 94 LR-------EMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVS 146
Query: 225 DFGLAKLLGSESSYITTRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRI 281
DFGL++ + + T+ V F + PE + +SD+++FG+L+ E+ S G++
Sbjct: 147 DFGLSRYVLDDE--YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKM 204
Query: 282 PVD 284
P +
Sbjct: 205 PYE 207
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 102/232 (43%), Gaps = 20/232 (8%)
Query: 57 VPEVSHLGWGHWYTLRELEVSTNGFSDDKXXXXXXXXXXXXXXXXDNSKVAVKNLLNNRG 116
P + LG+G W E+ + K VA+K ++
Sbjct: 8 APSTAGLGYGSW------EIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIK-MIKEGS 60
Query: 117 QAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPL 176
+E EF E + + + H+ LV+L G C + ++ EY+ NG L +L +
Sbjct: 61 MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLR-------EM 113
Query: 177 TWEIRMNIILGTAKGLSYLHEGLEPK-VVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSE 235
+ +L K + E LE K +HRD+ + N L++ KVSDFGL++ + +
Sbjct: 114 RHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD 173
Query: 236 SSYITTRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRIPVD 284
T+ V F + PE + +SD+++FG+L+ E+ S G++P +
Sbjct: 174 E--YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 223
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 110/230 (47%), Gaps = 29/230 (12%)
Query: 103 NSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
N KV K+ + +G+ ERE + + +RH ++++L ++V EY N
Sbjct: 38 NKKVLAKS--DMQGRIERE----ISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELF 91
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
+ + D ++ + + Y H K+VHRD+K N+L+D+H N K
Sbjct: 92 DYIVQRD-----KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVK 143
Query: 223 VSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGML-NERSDVYSFGILIMEVISGRI 281
++DFGL+ ++ ++ +++ T G+ Y APE S + DV+S G+++ ++ R+
Sbjct: 144 IADFGLSNIM-TDGNFLKTSC-GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRL 201
Query: 282 PVDYSRPPEEVNLIEWLKKMVTNRNPEGVLD-PKLPEKPTSRLLKRILLV 330
P D P L K ++N GV PK + L+KR+L+V
Sbjct: 202 PFDDESIP-------VLFKNISN----GVYTLPKFLSPGAAGLIKRMLIV 240
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 96/185 (51%), Gaps = 15/185 (8%)
Query: 102 DNS--KVAVKNLL-NNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAE--GAHRMLVYEY 156
DN+ +VAVK+L + G + K E+E + + H+N+V+ G C E G L+ E+
Sbjct: 35 DNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEF 94
Query: 157 VNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILID 216
+ +G+L+++L + + + + ++ + KG+ YL + VHRD+ + N+L++
Sbjct: 95 LPSGSLKEYLPKNK---NKINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVE 148
Query: 217 KHWNPKVSDFGLAKLLGSESSYITT---RVMGTFGYVAPEYASTGMLNERSDVYSFGILI 273
K+ DFGL K + ++ T R F Y APE SDV+SFG+ +
Sbjct: 149 SEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECLMQSKFYIASDVWSFGVTL 207
Query: 274 MEVIS 278
E+++
Sbjct: 208 HELLT 212
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 110/230 (47%), Gaps = 29/230 (12%)
Query: 103 NSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
N KV K+ + +G+ ERE + + +RH ++++L ++V EY N
Sbjct: 42 NKKVLAKS--DMQGRIERE----ISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELF 95
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
+ + D ++ + + Y H K+VHRD+K N+L+D+H N K
Sbjct: 96 DYIVQRD-----KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVK 147
Query: 223 VSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGML-NERSDVYSFGILIMEVISGRI 281
++DFGL+ ++ ++ +++ T G+ Y APE S + DV+S G+++ ++ R+
Sbjct: 148 IADFGLSNIM-TDGNFLKTSC-GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRL 205
Query: 282 PVDYSRPPEEVNLIEWLKKMVTNRNPEGVLD-PKLPEKPTSRLLKRILLV 330
P D P L K ++N GV PK + L+KR+L+V
Sbjct: 206 PFDDESIP-------VLFKNISN----GVYTLPKFLSPGAAGLIKRMLIV 244
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 110/230 (47%), Gaps = 29/230 (12%)
Query: 103 NSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
N KV K+ + +G+ ERE + + +RH ++++L ++V EY N
Sbjct: 48 NKKVLAKS--DMQGRIERE----ISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELF 101
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
+ + D ++ + + Y H K+VHRD+K N+L+D+H N K
Sbjct: 102 DYIVQRD-----KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVK 153
Query: 223 VSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGML-NERSDVYSFGILIMEVISGRI 281
++DFGL+ ++ ++ +++ T G+ Y APE S + DV+S G+++ ++ R+
Sbjct: 154 IADFGLSNIM-TDGNFLKTSC-GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRL 211
Query: 282 PVDYSRPPEEVNLIEWLKKMVTNRNPEGVLD-PKLPEKPTSRLLKRILLV 330
P D P L K ++N GV PK + L+KR+L+V
Sbjct: 212 PFDDESIP-------VLFKNISN----GVYTLPKFLSPGAAGLIKRMLIV 250
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 122/250 (48%), Gaps = 32/250 (12%)
Query: 106 VAVKNLLNNRG-QAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K L +A +E E + V + ++ RLLG C + L+ + + G L
Sbjct: 51 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLD 109
Query: 165 WL--HGD-VGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
++ H D +G L W +++ AKG++YL + ++VHRD+ + N+L+ +
Sbjct: 110 YVREHKDNIGSQYLLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHV 160
Query: 222 KVSDFGLAKLLGS-ESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
K++DFG AKLLG+ E Y ++A E + +SDV+S+G+ + E+++ G
Sbjct: 161 KITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 220
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNA 339
P D P E++ I L+K +LP+ P + + ++ ++C +A
Sbjct: 221 SKPYD-GIPASEISSI--LEK-----------GERLPQPPICTI--DVYMIMVKCWMIDA 264
Query: 340 QKRPKMGHVV 349
RPK ++
Sbjct: 265 DSRPKFRELI 274
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 88/193 (45%), Gaps = 29/193 (15%)
Query: 102 DNSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHR----------- 150
D +K + N +AERE V+A+ ++ H N+V G C +G
Sbjct: 35 DGKTYVIKRVKYNNEKAERE----VKALAKLDHVNIVHYNG-CWDGFDYDPETSSKNSSR 89
Query: 151 ------MLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVV 204
+ E+ + G LEQW+ G L + + + KG+ Y+H K++
Sbjct: 90 SKTKCLFIQMEFCDKGTLEQWIEKRRG--EKLDKVLALELFEQITKGVDYIHS---KKLI 144
Query: 205 HRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERS 264
+RD+K SNI + K+ DFGL L ++ R GT Y++PE S+ +
Sbjct: 145 NRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGK--RXRSKGTLRYMSPEQISSQDYGKEV 202
Query: 265 DVYSFGILIMEVI 277
D+Y+ G+++ E++
Sbjct: 203 DLYALGLILAELL 215
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 86/182 (47%), Gaps = 14/182 (7%)
Query: 102 DNSKVAVKNLLNNRG-QAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNG 160
DN+ VAVK+ + +F E + + H N+VRL+G C + +V E V G
Sbjct: 138 DNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG 197
Query: 161 NLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWN 220
+ +L + + L + + ++ A G+ YL +HRD+ + N L+ +
Sbjct: 198 DFLTFLRTE---GARLRVKTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNV 251
Query: 221 PKVSDFGLAKLLGSESSYITTRVMGT----FGYVAPEYASTGMLNERSDVYSFGILIMEV 276
K+SDFG+++ E+ + G + APE + G + SDV+SFGIL+ E
Sbjct: 252 LKISDFGMSR---EEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWET 308
Query: 277 IS 278
S
Sbjct: 309 FS 310
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 110/230 (47%), Gaps = 29/230 (12%)
Query: 103 NSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
N KV K+ + +G+ ERE + + +RH ++++L ++V EY N
Sbjct: 47 NKKVLAKS--DMQGRIERE----ISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELF 100
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
+ + D ++ + + Y H K+VHRD+K N+L+D+H N K
Sbjct: 101 DYIVQRD-----KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVK 152
Query: 223 VSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGML-NERSDVYSFGILIMEVISGRI 281
++DFGL+ ++ ++ +++ T G+ Y APE S + DV+S G+++ ++ R+
Sbjct: 153 IADFGLSNIM-TDGNFLKTSC-GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRL 210
Query: 282 PVDYSRPPEEVNLIEWLKKMVTNRNPEGVLD-PKLPEKPTSRLLKRILLV 330
P D P L K ++N GV PK + L+KR+L+V
Sbjct: 211 PFDDESIP-------VLFKNISN----GVYTLPKFLSPGAAGLIKRMLIV 249
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 82/167 (49%), Gaps = 6/167 (3%)
Query: 117 QAEREFKV-EVEAIGRVRHKNLVRLLGYCAEGAHRML--VYEYVNNGNLEQWLHGDVGPC 173
+AE++ V EV + ++H N+VR + + L V EY G+L +
Sbjct: 46 EAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKER 105
Query: 174 SPLTWEIRMNIILGTAKGLSYLHEGLEP--KVVHRDIKSSNILIDKHWNPKVSDFGLAKL 231
L E + ++ L H + V+HRD+K +N+ +D N K+ DFGLA++
Sbjct: 106 QYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI 165
Query: 232 LGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS 278
L + + +GT Y++PE + NE+SD++S G L+ E+ +
Sbjct: 166 LNHDEDF-AKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 91/183 (49%), Gaps = 14/183 (7%)
Query: 106 VAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQW 165
VA+K ++ +E EF E + + + H+ LV+L G C + ++ EY+ NG L +
Sbjct: 36 VAIK-MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNY 94
Query: 166 LHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPK-VVHRDIKSSNILIDKHWNPKVS 224
L + + +L K + E LE K +HRD+ + N L++ KVS
Sbjct: 95 LR-------EMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVS 147
Query: 225 DFGLAKLLGSESSYITTRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRI 281
DFGL++ + + T+ V F + PE + +SD+++FG+L+ E+ S G++
Sbjct: 148 DFGLSRYVLDDE--YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKM 205
Query: 282 PVD 284
P +
Sbjct: 206 PYE 208
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 92/184 (50%), Gaps = 11/184 (5%)
Query: 121 EFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEI 180
E E + ++ + +VR++G C E MLV E G L ++L + + +
Sbjct: 416 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQN----RHVKDKN 470
Query: 181 RMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYIT 240
+ ++ + G+ YL E VHRD+ + N+L+ K+SDFGL+K L ++ +Y
Sbjct: 471 IIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 527
Query: 241 TRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRIPVDYSRPPEEVNLIEW 297
+ G + + APE + + +SDV+SFG+L+ E S G+ P + E ++E
Sbjct: 528 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 587
Query: 298 LKKM 301
++M
Sbjct: 588 GERM 591
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 91/183 (49%), Gaps = 14/183 (7%)
Query: 106 VAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQW 165
VA+K ++ +E EF E + + + H+ LV+L G C + ++ EY+ NG L +
Sbjct: 42 VAIK-MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNY 100
Query: 166 LHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPK-VVHRDIKSSNILIDKHWNPKVS 224
L + + +L K + E LE K +HRD+ + N L++ KVS
Sbjct: 101 LR-------EMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVS 153
Query: 225 DFGLAKLLGSESSYITTRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRI 281
DFGL++ + + T+ V F + PE + +SD+++FG+L+ E+ S G++
Sbjct: 154 DFGLSRYVLDDE--YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKM 211
Query: 282 PVD 284
P +
Sbjct: 212 PYE 214
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 82/171 (47%), Gaps = 9/171 (5%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E+ + + + + G +G+ ++ EY+ G+ L GP +
Sbjct: 71 EITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRA--GPFDEFQIATMLKE 128
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVM 244
IL KGL YLH K +HRDIK++N+L+ + + K++DFG+A L +++ +
Sbjct: 129 IL---KGLDYLHS---EKKIHRDIKAANVLLSEQGDVKLADFGVAGQL-TDTQIKRNTFV 181
Query: 245 GTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVDYSRPPEEVNLI 295
GT ++APE + ++D++S GI +E+ G P P + LI
Sbjct: 182 GTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLI 232
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 122/250 (48%), Gaps = 32/250 (12%)
Query: 106 VAVKNLLNNRG-QAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K L +A +E E + V + ++ RLLG C + L+ + + G L
Sbjct: 49 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLD 107
Query: 165 WL--HGD-VGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
++ H D +G L W +++ AKG++YL + ++VHRD+ + N+L+ +
Sbjct: 108 YVREHKDNIGSQYLLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHV 158
Query: 222 KVSDFGLAKLLGS-ESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
K++DFG AKLLG+ E Y ++A E + +SDV+S+G+ + E+++ G
Sbjct: 159 KITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 218
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNA 339
P D P E++ I L+K +LP+ P + + ++ ++C +A
Sbjct: 219 SKPYD-GIPASEISSI--LEK-----------GERLPQPPICTI--DVYMIMVKCWMIDA 262
Query: 340 QKRPKMGHVV 349
RPK ++
Sbjct: 263 DSRPKFRELI 272
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 92/184 (50%), Gaps = 11/184 (5%)
Query: 121 EFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEI 180
E E + ++ + +VR++G C E MLV E G L ++L + + +
Sbjct: 417 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQN----RHVKDKN 471
Query: 181 RMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYIT 240
+ ++ + G+ YL E VHRD+ + N+L+ K+SDFGL+K L ++ +Y
Sbjct: 472 IIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 528
Query: 241 TRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRIPVDYSRPPEEVNLIEW 297
+ G + + APE + + +SDV+SFG+L+ E S G+ P + E ++E
Sbjct: 529 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 588
Query: 298 LKKM 301
++M
Sbjct: 589 GERM 592
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 127/273 (46%), Gaps = 31/273 (11%)
Query: 104 SKVAVKNLLNNRGQAER-EFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
++VAVK + + ER EF E + ++VRLLG ++G ++V E + +G+L
Sbjct: 45 TRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDL 104
Query: 163 EQWLH-----GDVGPCSPL-TWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILID 216
+ +L + P P T + + + A G++YL+ K VHRD+ + N ++
Sbjct: 105 KSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCMVA 161
Query: 217 KHWNPKVSDFGLAK-LLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIME 275
+ K+ DFG+ + + ++ + + ++APE G+ SD++SFG+++ E
Sbjct: 162 HDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWE 221
Query: 276 VISGRIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLD--PKLPEKPTSRLLKRILLVALR 333
+ S + P + E + K V + G LD PE+ T L R+
Sbjct: 222 ITS------LAEQPYQGLSNEQVLKFVMDG---GYLDQPDNCPERVTD--LMRM------ 264
Query: 334 CVDPNAQKRPKMGHVVHMLEAQESPSKEPSNSF 366
C N + RP +V++L+ PS P SF
Sbjct: 265 CWQFNPKMRPTFLEIVNLLKDDLHPSF-PEVSF 296
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 91/185 (49%), Gaps = 15/185 (8%)
Query: 105 KVAVKNL-LNNRGQAE-REFKVEVEAIGRVRHKNLVRLLGYCAEGAHR-----MLVYEYV 157
KVAVK + L+N Q E EF E + H N++RLLG C E + + M++ ++
Sbjct: 64 KVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFM 123
Query: 158 NNGNLEQWL---HGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNIL 214
G+L +L + GP + + + ++ A G+ YL +HRD+ + N +
Sbjct: 124 KYGDLHTYLLYSRLETGP-KHIPLQTLLKFMVDIALGMEYLSN---RNFLHRDLAARNCM 179
Query: 215 IDKHWNPKVSDFGLAKLLGSESSYITTRVMGT-FGYVAPEYASTGMLNERSDVYSFGILI 273
+ V+DFGL+K + S Y R+ ++A E + + +SDV++FG+ +
Sbjct: 180 LRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTM 239
Query: 274 MEVIS 278
E+ +
Sbjct: 240 WEIAT 244
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 42/206 (20%)
Query: 102 DNSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHR----------- 150
D ++ + N +AERE V+A+ ++ H N+V G C +G
Sbjct: 36 DGKTYVIRRVKYNNEKAERE----VKALAKLDHVNIVHYNG-CWDGFDYDPETSDDSLES 90
Query: 151 -------------------MLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKG 191
+ E+ + G LEQW+ G L + + + KG
Sbjct: 91 SDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRG--EKLDKVLALELFEQITKG 148
Query: 192 LSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVA 251
+ Y+H K++HRD+K SNI + K+ DFGL L ++ TR GT Y++
Sbjct: 149 VDYIHS---KKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGK--RTRSKGTLRYMS 203
Query: 252 PEYASTGMLNERSDVYSFGILIMEVI 277
PE S+ + D+Y+ G+++ E++
Sbjct: 204 PEQISSQDYGKEVDLYALGLILAELL 229
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 89/187 (47%), Gaps = 17/187 (9%)
Query: 106 VAVKNLLNNRGQAE-REFKVEVEAIGRV-RHKNLVRLLGYCAE-GAHRMLVYEYVNNGNL 162
VAVK L +E R E++ + + H N+V LLG C + G M++ E+ GNL
Sbjct: 62 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 121
Query: 163 EQWLHG---DVGPCSP-------LTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSN 212
+L + P P LT E + AKG+ +L K +HRD+ + N
Sbjct: 122 STYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFLASR---KXIHRDLAARN 178
Query: 213 ILIDKHWNPKVSDFGLAKLLGSESSYITT-RVMGTFGYVAPEYASTGMLNERSDVYSFGI 271
IL+ + K+ DFGLA+ + + + ++APE + +SDV+SFG+
Sbjct: 179 ILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 238
Query: 272 LIMEVIS 278
L+ E+ S
Sbjct: 239 LLWEIFS 245
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 122/250 (48%), Gaps = 32/250 (12%)
Query: 106 VAVKNLLNNRG-QAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K L +A +E E + V + ++ RLLG C + L+ + + G L
Sbjct: 47 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLD 105
Query: 165 WL--HGD-VGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
++ H D +G L W +++ AKG++YL + ++VHRD+ + N+L+ +
Sbjct: 106 YVREHKDNIGSQYLLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHV 156
Query: 222 KVSDFGLAKLLGS-ESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
K++DFG AKLLG+ E Y ++A E + +SDV+S+G+ + E+++ G
Sbjct: 157 KITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 216
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNA 339
P D P E++ I L+K +LP+ P + + ++ ++C +A
Sbjct: 217 SKPYD-GIPASEISSI--LEK-----------GERLPQPPICTI--DVYMIMVKCWMIDA 260
Query: 340 QKRPKMGHVV 349
RPK ++
Sbjct: 261 DSRPKFRELI 270
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 78/181 (43%), Gaps = 9/181 (4%)
Query: 106 VAVKNL-LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K + N G K E+EA+ +RH+++ +L +V EY G L
Sbjct: 38 VAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFD 97
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
++ L+ E + ++Y+H HRD+K N+L D++ K+
Sbjct: 98 YIISQ----DRLSEEETRVVFRQIVSAVAYVHS---QGYAHRDLKPENLLFDEYHKLKLI 150
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYAS-TGMLNERSDVYSFGILIMEVISGRIPV 283
DFGL Y G+ Y APE L +DV+S GIL+ ++ G +P
Sbjct: 151 DFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPF 210
Query: 284 D 284
D
Sbjct: 211 D 211
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 127/273 (46%), Gaps = 31/273 (11%)
Query: 104 SKVAVKNLLNNRGQAER-EFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
++VAVK + + ER EF E + ++VRLLG ++G ++V E + +G+L
Sbjct: 48 TRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDL 107
Query: 163 EQWLH-----GDVGPCSPL-TWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILID 216
+ +L + P P T + + + A G++YL+ K VHRD+ + N ++
Sbjct: 108 KSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCMVA 164
Query: 217 KHWNPKVSDFGLAK-LLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIME 275
+ K+ DFG+ + + ++ + + ++APE G+ SD++SFG+++ E
Sbjct: 165 HDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWE 224
Query: 276 VISGRIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLD--PKLPEKPTSRLLKRILLVALR 333
+ S + P + E + K V + G LD PE+ T L R+
Sbjct: 225 ITS------LAEQPYQGLSNEQVLKFVMD---GGYLDQPDNCPERVTD--LMRM------ 267
Query: 334 CVDPNAQKRPKMGHVVHMLEAQESPSKEPSNSF 366
C N + RP +V++L+ PS P SF
Sbjct: 268 CWQFNPKMRPTFLEIVNLLKDDLHPSF-PEVSF 299
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 122/250 (48%), Gaps = 32/250 (12%)
Query: 106 VAVKNLLNNRG-QAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K L +A +E E + V + ++ RLLG C + L+ + + G L
Sbjct: 54 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLD 112
Query: 165 WL--HGD-VGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
++ H D +G L W +++ AKG++YL + ++VHRD+ + N+L+ +
Sbjct: 113 YVREHKDNIGSQYLLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHV 163
Query: 222 KVSDFGLAKLLGS-ESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
K++DFG AKLLG+ E Y ++A E + +SDV+S+G+ + E+++ G
Sbjct: 164 KITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 223
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNA 339
P D P E++ I L+K +LP+ P + + ++ ++C +A
Sbjct: 224 SKPYD-GIPASEISSI--LEK-----------GERLPQPPICTI--DVYMIMVKCWMIDA 267
Query: 340 QKRPKMGHVV 349
RPK ++
Sbjct: 268 DSRPKFRELI 277
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 78/147 (53%), Gaps = 13/147 (8%)
Query: 152 LVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSS 211
+ E+++ G+L+Q L + +I + + KGL+YL E + K++HRD+K S
Sbjct: 108 ICMEHMDGGSLDQVLK----KAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPS 161
Query: 212 NILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGI 271
NIL++ K+ DFG++ G + +GT Y++PE + +SD++S G+
Sbjct: 162 NILVNSRGEIKLCDFGVS---GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGL 218
Query: 272 LIMEVISGRIPVDYSRPPEEVNLIEWL 298
++E+ GR P+ PP + +E +
Sbjct: 219 SLVEMAVGRYPI----PPPDAKELELM 241
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 90/187 (48%), Gaps = 12/187 (6%)
Query: 105 KVAVKNLLN-NRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLE 163
+VAVK L Q E +F +E I ++ H+N+VR +G + R ++ E + G+L+
Sbjct: 63 QVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 122
Query: 164 QWLH-GDVGPCSPLTWEI--RMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWN 220
+L P P + + +++ A G YL E +HRDI + N L+
Sbjct: 123 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGP 179
Query: 221 ---PKVSDFGLAKLLGSESSYITTRV-MGTFGYVAPEYASTGMLNERSDVYSFGILIMEV 276
K+ DFG+A+ + S Y M ++ PE G+ ++D +SFG+L+ E+
Sbjct: 180 GRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 239
Query: 277 IS-GRIP 282
S G +P
Sbjct: 240 FSLGYMP 246
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 85/174 (48%), Gaps = 13/174 (7%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E++ + +V G + E+++ G+L+Q L + +I +
Sbjct: 116 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK----AGRIPEQILGKV 171
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVM 244
+ KGL+YL E + K++HRD+K SNIL++ K+ DFG++ G + +
Sbjct: 172 SIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSFV 226
Query: 245 GTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVDYSRPPEEVNLIEWL 298
GT Y++PE + +SD++S G+ ++E+ GR P+ PP + +E +
Sbjct: 227 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI----PPPDAKELELM 276
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 126/273 (46%), Gaps = 31/273 (11%)
Query: 104 SKVAVKNLLNNRGQAER-EFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
++VAVK + + ER EF E + ++VRLLG ++G ++V E + +G+L
Sbjct: 48 TRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDL 107
Query: 163 EQWLH-----GDVGPCSPL-TWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILID 216
+ +L + P P T + + + A G++YL+ K VHRD+ + N ++
Sbjct: 108 KSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCMVA 164
Query: 217 KHWNPKVSDFGLAK-LLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIME 275
+ K+ DFG+ + + ++ + + ++APE G+ SD++SFG+++ E
Sbjct: 165 HDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWE 224
Query: 276 VISGRIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLD--PKLPEKPTSRLLKRILLVALR 333
+ S + P + E + K V + G LD PE+ T L R+
Sbjct: 225 ITS------LAEQPYQGLSNEQVLKFVMDG---GYLDQPDNCPERVTD--LMRM------ 267
Query: 334 CVDPNAQKRPKMGHVVHMLEAQESPSKEPSNSF 366
C N RP +V++L+ PS P SF
Sbjct: 268 CWQFNPNMRPTFLEIVNLLKDDLHPSF-PEVSF 299
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 89/179 (49%), Gaps = 11/179 (6%)
Query: 121 EFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEI 180
E E + ++ + +VR++G C E MLV E G L ++L + + +
Sbjct: 72 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQN----RHVKDKN 126
Query: 181 RMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYIT 240
+ ++ + G+ YL E VHRD+ + N+L+ K+SDFGL+K L ++ +Y
Sbjct: 127 IIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 183
Query: 241 TRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRIPVDYSRPPEEVNLIE 296
+ G + + APE + + +SDV+SFG+L+ E S G+ P + E ++E
Sbjct: 184 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 242
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 123/270 (45%), Gaps = 26/270 (9%)
Query: 105 KVAVKNLLNNRGQAER-EFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLE 163
KVA+K + + Q E E++A+ + H N+V LV + ++ G++
Sbjct: 42 KVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVL 101
Query: 164 QWLHGDVGP----CSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHW 219
+ V L I+ +GL YLH+ + +HRD+K+ NIL+ +
Sbjct: 102 DIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDG 158
Query: 220 NPKVSDFGLAKLLGSESSYITTRVMGTF----GYVAPEYA-STGMLNERSDVYSFGILIM 274
+ +++DFG++ L + +V TF ++APE + ++D++SFGI +
Sbjct: 159 SVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAI 218
Query: 275 EVISGRIPVDYSRPPEEVNLIEWLKKMVTNRNPE---GVLDPKLPEKPTSRLLKRILLVA 331
E+ +G P + PP +V ++ + N P GV D ++ +K K I L
Sbjct: 219 ELATGAAPY-HKYPPMKVLML-----TLQNDPPSLETGVQDKEMLKKYGKSFRKMISL-- 270
Query: 332 LRCVDPNAQKRPKMGHVVHMLEAQESPSKE 361
C+ + +KRP ++ Q++ +KE
Sbjct: 271 --CLQKDPEKRPTAAELLRHKFFQKAKNKE 298
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 89/179 (49%), Gaps = 11/179 (6%)
Query: 121 EFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEI 180
E E + ++ + +VR++G C E MLV E G L ++L + + +
Sbjct: 74 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQN----RHVKDKN 128
Query: 181 RMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYIT 240
+ ++ + G+ YL E VHRD+ + N+L+ K+SDFGL+K L ++ +Y
Sbjct: 129 IIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 185
Query: 241 TRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRIPVDYSRPPEEVNLIE 296
+ G + + APE + + +SDV+SFG+L+ E S G+ P + E ++E
Sbjct: 186 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 244
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 89/179 (49%), Gaps = 11/179 (6%)
Query: 121 EFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEI 180
E E + ++ + +VR++G C E MLV E G L ++L + + +
Sbjct: 74 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQN----RHVKDKN 128
Query: 181 RMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYIT 240
+ ++ + G+ YL E VHRD+ + N+L+ K+SDFGL+K L ++ +Y
Sbjct: 129 IIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 185
Query: 241 TRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRIPVDYSRPPEEVNLIE 296
+ G + + APE + + +SDV+SFG+L+ E S G+ P + E ++E
Sbjct: 186 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 244
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 87/188 (46%), Gaps = 18/188 (9%)
Query: 106 VAVKNLLNNRGQAE-REFKVEVEAIGRV-RHKNLVRLLGYCAE-GAHRMLVYEYVNNGNL 162
VAVK L +E R E++ + + H N+V LLG C + G M++ E+ GNL
Sbjct: 61 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 120
Query: 163 EQWLHGDVGPCSP-----------LTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSS 211
+L P LT E + AKG+ +L K +HRD+ +
Sbjct: 121 STYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAAR 177
Query: 212 NILIDKHWNPKVSDFGLAKLLGSESSYITT-RVMGTFGYVAPEYASTGMLNERSDVYSFG 270
NIL+ + K+ DFGLA+ + + + ++APE + +SDV+SFG
Sbjct: 178 NILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 237
Query: 271 ILIMEVIS 278
+L+ E+ S
Sbjct: 238 VLLWEIFS 245
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 89/187 (47%), Gaps = 12/187 (6%)
Query: 105 KVAVKNLLN-NRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLE 163
+VAVK L Q E +F +E I + H+N+VR +G + R ++ E + G+L+
Sbjct: 89 QVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 148
Query: 164 QWLH-GDVGPCSPLTWEI--RMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWN 220
+L P P + + +++ A G YL E +HRDI + N L+
Sbjct: 149 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGP 205
Query: 221 ---PKVSDFGLAKLLGSESSYITTRV-MGTFGYVAPEYASTGMLNERSDVYSFGILIMEV 276
K+ DFG+A+ + S Y M ++ PE G+ ++D +SFG+L+ E+
Sbjct: 206 GRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 265
Query: 277 IS-GRIP 282
S G +P
Sbjct: 266 FSLGYMP 272
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 93/184 (50%), Gaps = 16/184 (8%)
Query: 106 VAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQW 165
VA+K ++ +E EF E + + + H+ LV+L G C + ++ EY+ NG L +
Sbjct: 36 VAIK-MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNY 94
Query: 166 LHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPK-VVHRDIKSSNILIDKHWNPKVS 224
L + + +L K + E LE K +HRD+ + N L++ KVS
Sbjct: 95 LR-------EMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVS 147
Query: 225 DFGLAKLLGSESSYITTRVMGT---FGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GR 280
DFGL++ + + Y ++R G+ + PE + +SD+++FG+L+ E+ S G+
Sbjct: 148 DFGLSRYV-LDDEYTSSR--GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGK 204
Query: 281 IPVD 284
+P +
Sbjct: 205 MPYE 208
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 90/187 (48%), Gaps = 12/187 (6%)
Query: 105 KVAVKNLLN-NRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLE 163
+VAVK L Q E +F +E I ++ H+N+VR +G + R ++ E + G+L+
Sbjct: 77 QVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 136
Query: 164 QWLH-GDVGPCSPLTWEI--RMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWN 220
+L P P + + +++ A G YL E +HRDI + N L+
Sbjct: 137 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGP 193
Query: 221 ---PKVSDFGLAKLLGSESSYITTRV-MGTFGYVAPEYASTGMLNERSDVYSFGILIMEV 276
K+ DFG+A+ + S Y M ++ PE G+ ++D +SFG+L+ E+
Sbjct: 194 GRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 253
Query: 277 IS-GRIP 282
S G +P
Sbjct: 254 FSLGYMP 260
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 89/179 (49%), Gaps = 11/179 (6%)
Query: 121 EFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEI 180
E E + ++ + +VR++G C E MLV E G L ++L + + +
Sbjct: 64 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQN----RHVKDKN 118
Query: 181 RMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYIT 240
+ ++ + G+ YL E VHRD+ + N+L+ K+SDFGL+K L ++ +Y
Sbjct: 119 IIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 175
Query: 241 TRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRIPVDYSRPPEEVNLIE 296
+ G + + APE + + +SDV+SFG+L+ E S G+ P + E ++E
Sbjct: 176 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 234
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 88/179 (49%), Gaps = 15/179 (8%)
Query: 106 VAVKNLLNNRGQAERE-FKVEVEAIGRVRHKNLVRLLGYC--AEGAHRMLVYEYVNNGNL 162
VAVK L + G R +K E++ + + H+++++ G C A A LV EYV G+L
Sbjct: 63 VAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSL 122
Query: 163 EQWL-HGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
+L +G L + ++ +G++YLH +HRD+ + N+L+D
Sbjct: 123 RDYLPRHSIGLAQLLLFAQQI------CEGMAYLHA---QHYIHRDLAARNVLLDNDRLV 173
Query: 222 KVSDFGLAKLL--GSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS 278
K+ DFGLAK + G E + + APE SDV+SFG+ + E+++
Sbjct: 174 KIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 89/187 (47%), Gaps = 12/187 (6%)
Query: 105 KVAVKNLLN-NRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLE 163
+VAVK L Q E +F +E I + H+N+VR +G + R ++ E + G+L+
Sbjct: 63 QVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 122
Query: 164 QWLH-GDVGPCSPLTWEI--RMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWN 220
+L P P + + +++ A G YL E +HRDI + N L+
Sbjct: 123 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGP 179
Query: 221 ---PKVSDFGLAKLLGSESSYITTRV-MGTFGYVAPEYASTGMLNERSDVYSFGILIMEV 276
K+ DFG+A+ + S Y M ++ PE G+ ++D +SFG+L+ E+
Sbjct: 180 GRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 239
Query: 277 IS-GRIP 282
S G +P
Sbjct: 240 FSLGYMP 246
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 89/179 (49%), Gaps = 11/179 (6%)
Query: 121 EFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEI 180
E E + ++ + +VR++G C E MLV E G L ++L + + +
Sbjct: 58 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQN----RHVKDKN 112
Query: 181 RMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYIT 240
+ ++ + G+ YL E VHRD+ + N+L+ K+SDFGL+K L ++ +Y
Sbjct: 113 IIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 169
Query: 241 TRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRIPVDYSRPPEEVNLIE 296
+ G + + APE + + +SDV+SFG+L+ E S G+ P + E ++E
Sbjct: 170 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 228
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 89/179 (49%), Gaps = 11/179 (6%)
Query: 121 EFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEI 180
E E + ++ + +VR++G C E MLV E G L ++L + + +
Sbjct: 52 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQN----RHVKDKN 106
Query: 181 RMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYIT 240
+ ++ + G+ YL E VHRD+ + N+L+ K+SDFGL+K L ++ +Y
Sbjct: 107 IIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 163
Query: 241 TRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRIPVDYSRPPEEVNLIE 296
+ G + + APE + + +SDV+SFG+L+ E S G+ P + E ++E
Sbjct: 164 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 222
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 89/187 (47%), Gaps = 12/187 (6%)
Query: 105 KVAVKNLLN-NRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLE 163
+VAVK L Q E +F +E I + H+N+VR +G + R ++ E + G+L+
Sbjct: 79 QVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 138
Query: 164 QWLH-GDVGPCSPLTWEI--RMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWN 220
+L P P + + +++ A G YL E +HRDI + N L+
Sbjct: 139 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGP 195
Query: 221 ---PKVSDFGLAKLLGSESSYITTRV-MGTFGYVAPEYASTGMLNERSDVYSFGILIMEV 276
K+ DFG+A+ + S Y M ++ PE G+ ++D +SFG+L+ E+
Sbjct: 196 GRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 255
Query: 277 IS-GRIP 282
S G +P
Sbjct: 256 FSLGYMP 262
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 85/188 (45%), Gaps = 16/188 (8%)
Query: 105 KVAVKNLLNNRGQAERE-FKVEVEAIGRVRHKNLVRL------LGYCAEGAHRMLVYEYV 157
+VA+K RE + +E++ + ++ H N+V L A +L EY
Sbjct: 42 QVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYC 101
Query: 158 NNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILID- 216
G+L ++L+ C IR ++ + L YLHE +++HRD+K NI++
Sbjct: 102 EGGDLRKYLNQFENCCGLKEGPIR-TLLSDISSALRYLHEN---RIIHRDLKPENIVLQP 157
Query: 217 --KHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIM 274
+ K+ D G AK L + + T +GT Y+APE D +SFG L
Sbjct: 158 GPQRLIHKIIDLGYAKEL--DQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAF 215
Query: 275 EVISGRIP 282
E I+G P
Sbjct: 216 ECITGFRP 223
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 85/188 (45%), Gaps = 16/188 (8%)
Query: 105 KVAVKNLLNNRGQAERE-FKVEVEAIGRVRHKNLVRL------LGYCAEGAHRMLVYEYV 157
+VA+K RE + +E++ + ++ H N+V L A +L EY
Sbjct: 41 QVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYC 100
Query: 158 NNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILID- 216
G+L ++L+ C IR ++ + L YLHE +++HRD+K NI++
Sbjct: 101 EGGDLRKYLNQFENCCGLKEGPIR-TLLSDISSALRYLHEN---RIIHRDLKPENIVLQP 156
Query: 217 --KHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIM 274
+ K+ D G AK L + + T +GT Y+APE D +SFG L
Sbjct: 157 GPQRLIHKIIDLGYAKEL--DQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAF 214
Query: 275 EVISGRIP 282
E I+G P
Sbjct: 215 ECITGFRP 222
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 123/266 (46%), Gaps = 34/266 (12%)
Query: 105 KVAVKNLLNNRGQAEREFKV-EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLE 163
+VA++ + N + Q ++E + E+ + ++ N+V L G +V EY+ G+L
Sbjct: 47 EVAIRQM-NLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT 105
Query: 164 QWLH---GDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWN 220
+ D G + + E + L +LH +V+HRDIKS NIL+ +
Sbjct: 106 DVVTETCMDEGQIAAVCRE--------CLQALEFLHSN---QVIHRDIKSDNILLGMDGS 154
Query: 221 PKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGR 280
K++DFG + E S + ++GT ++APE + + D++S GI+ +E+I G
Sbjct: 155 VKLTDFGFCAQITPEQSK-RSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
Query: 281 IPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNAQ 340
P P + LI TN PE + PEK S + + L RC++ + +
Sbjct: 214 PPYLNENPLRALYLI------ATNGTPE----LQNPEK-LSAIFRDFL---NRCLEMDVE 259
Query: 341 KRPKMGHVVHMLEAQESPSKEPSNSF 366
KR G +L+ Q +P +S
Sbjct: 260 KR---GSAKELLQHQFLKIAKPLSSL 282
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 89/187 (47%), Gaps = 12/187 (6%)
Query: 105 KVAVKNLLN-NRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLE 163
+VAVK L Q E +F +E I + H+N+VR +G + R ++ E + G+L+
Sbjct: 62 QVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 121
Query: 164 QWLH-GDVGPCSPLTWEI--RMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWN 220
+L P P + + +++ A G YL E +HRDI + N L+
Sbjct: 122 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGP 178
Query: 221 ---PKVSDFGLAKLLGSESSYITTRV-MGTFGYVAPEYASTGMLNERSDVYSFGILIMEV 276
K+ DFG+A+ + S Y M ++ PE G+ ++D +SFG+L+ E+
Sbjct: 179 GRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 238
Query: 277 IS-GRIP 282
S G +P
Sbjct: 239 FSLGYMP 245
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 89/187 (47%), Gaps = 12/187 (6%)
Query: 105 KVAVKNLLN-NRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLE 163
+VAVK L Q E +F +E I + H+N+VR +G + R ++ E + G+L+
Sbjct: 69 QVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 128
Query: 164 QWLH-GDVGPCSPLTWEI--RMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWN 220
+L P P + + +++ A G YL E +HRDI + N L+
Sbjct: 129 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGP 185
Query: 221 ---PKVSDFGLAKLLGSESSYITTRV-MGTFGYVAPEYASTGMLNERSDVYSFGILIMEV 276
K+ DFG+A+ + S Y M ++ PE G+ ++D +SFG+L+ E+
Sbjct: 186 GRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 245
Query: 277 IS-GRIP 282
S G +P
Sbjct: 246 FSLGYMP 252
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 126/274 (45%), Gaps = 33/274 (12%)
Query: 104 SKVAVKNLLNNRGQAER-EFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
++VAVK + + ER EF E + ++VRLLG ++G ++V E + +G+L
Sbjct: 49 TRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDL 108
Query: 163 EQWLH-----GDVGPCSPL-TWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILID 216
+ +L + P P T + + + A G++YL+ K VHR++ + N ++
Sbjct: 109 KSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRNLAARNCMVA 165
Query: 217 KHWNPKVSDFGLAKLLGSESSYITTRVMGTFG--YVAPEYASTGMLNERSDVYSFGILIM 274
+ K+ DFG+ + + E+ Y G ++APE G+ SD++SFG+++
Sbjct: 166 HDFTVKIGDFGMTRDI-YETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLW 224
Query: 275 EVISGRIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLD--PKLPEKPTSRLLKRILLVAL 332
E+ S + P + E + K V + G LD PE+ T L R+
Sbjct: 225 EITS------LAEQPYQGLSNEQVLKFVMD---GGYLDQPDNCPERVTD--LMRM----- 268
Query: 333 RCVDPNAQKRPKMGHVVHMLEAQESPSKEPSNSF 366
C N RP +V++L+ PS P SF
Sbjct: 269 -CWQFNPNMRPTFLEIVNLLKDDLHPSF-PEVSF 300
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 87/189 (46%), Gaps = 19/189 (10%)
Query: 106 VAVKNLLNNRGQAE-REFKVEVEAIGRV-RHKNLVRLLGYCAE-GAHRMLVYEYVNNGNL 162
VAVK L +E R E++ + + H N+V LLG C + G M++ E+ GNL
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 163 EQWLHGDVGPCSP------------LTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKS 210
+L P LT E + AKG+ +L K +HRD+ +
Sbjct: 120 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAA 176
Query: 211 SNILIDKHWNPKVSDFGLAKLLGSESSYITT-RVMGTFGYVAPEYASTGMLNERSDVYSF 269
NIL+ + K+ DFGLA+ + + + ++APE + +SDV+SF
Sbjct: 177 RNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 236
Query: 270 GILIMEVIS 278
G+L+ E+ S
Sbjct: 237 GVLLWEIFS 245
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 89/179 (49%), Gaps = 11/179 (6%)
Query: 121 EFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEI 180
E E + ++ + +VR++G C E MLV E G L ++L + + +
Sbjct: 54 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQN----RHVKDKN 108
Query: 181 RMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYIT 240
+ ++ + G+ YL E VHRD+ + N+L+ K+SDFGL+K L ++ +Y
Sbjct: 109 IIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 165
Query: 241 TRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRIPVDYSRPPEEVNLIE 296
+ G + + APE + + +SDV+SFG+L+ E S G+ P + E ++E
Sbjct: 166 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 224
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 121/250 (48%), Gaps = 32/250 (12%)
Query: 106 VAVKNLLNNRG-QAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K L +A +E E + V + ++ RLLG C + L+ + + G L
Sbjct: 49 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLD 107
Query: 165 WL--HGD-VGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
++ H D +G L W +++ AKG++YL + ++VHRD+ + N+L+ +
Sbjct: 108 YVREHKDNIGSQYLLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHV 158
Query: 222 KVSDFGLAKLLGS-ESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
K++DFG AKLLG+ E Y ++A E + +SDV+S+G+ + E+++ G
Sbjct: 159 KITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 218
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNA 339
P D P E++ I L+K +LP+ P + + ++ +C +A
Sbjct: 219 SKPYD-GIPASEISSI--LEK-----------GERLPQPPICTI--DVYMIMRKCWMIDA 262
Query: 340 QKRPKMGHVV 349
RPK ++
Sbjct: 263 DSRPKFRELI 272
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 89/187 (47%), Gaps = 12/187 (6%)
Query: 105 KVAVKNLLN-NRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLE 163
+VAVK L Q E +F +E I + H+N+VR +G + R ++ E + G+L+
Sbjct: 62 QVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLK 121
Query: 164 QWLH-GDVGPCSPLTWEI--RMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWN 220
+L P P + + +++ A G YL E +HRDI + N L+
Sbjct: 122 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGP 178
Query: 221 ---PKVSDFGLAKLLGSESSYITTRV-MGTFGYVAPEYASTGMLNERSDVYSFGILIMEV 276
K+ DFG+A+ + S Y M ++ PE G+ ++D +SFG+L+ E+
Sbjct: 179 GRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 238
Query: 277 IS-GRIP 282
S G +P
Sbjct: 239 FSLGYMP 245
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 89/187 (47%), Gaps = 12/187 (6%)
Query: 105 KVAVKNLLN-NRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLE 163
+VAVK L Q E +F +E I + H+N+VR +G + R ++ E + G+L+
Sbjct: 63 QVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 122
Query: 164 QWLH-GDVGPCSPLTWEI--RMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWN 220
+L P P + + +++ A G YL E +HRDI + N L+
Sbjct: 123 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGP 179
Query: 221 ---PKVSDFGLAKLLGSESSYITTRV-MGTFGYVAPEYASTGMLNERSDVYSFGILIMEV 276
K+ DFG+A+ + S Y M ++ PE G+ ++D +SFG+L+ E+
Sbjct: 180 GRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 239
Query: 277 IS-GRIP 282
S G +P
Sbjct: 240 FSLGYMP 246
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 89/187 (47%), Gaps = 12/187 (6%)
Query: 105 KVAVKNLLNNRG-QAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLE 163
+VAVK L Q E +F +E I + H+N+VR +G + R ++ E + G+L+
Sbjct: 77 QVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 136
Query: 164 QWLH-GDVGPCSPLTWEI--RMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWN 220
+L P P + + +++ A G YL E +HRDI + N L+
Sbjct: 137 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGP 193
Query: 221 ---PKVSDFGLAKLLGSESSYITTRV-MGTFGYVAPEYASTGMLNERSDVYSFGILIMEV 276
K+ DFG+A+ + S Y M ++ PE G+ ++D +SFG+L+ E+
Sbjct: 194 GRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 253
Query: 277 IS-GRIP 282
S G +P
Sbjct: 254 FSLGYMP 260
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 89/187 (47%), Gaps = 12/187 (6%)
Query: 105 KVAVKNLLN-NRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLE 163
+VAVK L Q E +F +E I + H+N+VR +G + R ++ E + G+L+
Sbjct: 77 QVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLK 136
Query: 164 QWLH-GDVGPCSPLTWEI--RMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWN 220
+L P P + + +++ A G YL E +HRDI + N L+
Sbjct: 137 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGP 193
Query: 221 ---PKVSDFGLAKLLGSESSYITTRV-MGTFGYVAPEYASTGMLNERSDVYSFGILIMEV 276
K+ DFG+A+ + S Y M ++ PE G+ ++D +SFG+L+ E+
Sbjct: 194 GRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 253
Query: 277 IS-GRIP 282
S G +P
Sbjct: 254 FSLGYMP 260
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 97/224 (43%), Gaps = 37/224 (16%)
Query: 135 KNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGD-VGPCSPLTWEIRMNIILGTAKGLS 193
+N V+ + + + EY N L +H + + W + I+ + LS
Sbjct: 75 RNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQIL----EALS 130
Query: 194 YLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAK---------LLGSE----SSYIT 240
Y+H ++HR++K NI ID+ N K+ DFGLAK L S+ SS
Sbjct: 131 YIHS---QGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNL 187
Query: 241 TRVMGTFGYVAPEYAS-TGMLNERSDVYSFGILIMEVISGRIPVDYSRPPEEVNLIEWLK 299
T +GT YVA E TG NE+ D YS GI+ E I +S E VN+++ L+
Sbjct: 188 TSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI-----YPFSTGXERVNILKKLR 242
Query: 300 KMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNAQKRP 343
+ P+ + EK RLL +D + KRP
Sbjct: 243 SVSIEFPPDFDDNKXKVEKKIIRLL----------IDHDPNKRP 276
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 126/274 (45%), Gaps = 33/274 (12%)
Query: 104 SKVAVKNLLNNRGQAER-EFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
++VAVK + + ER EF E + ++VRLLG ++G ++V E + +G+L
Sbjct: 48 TRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDL 107
Query: 163 EQWLH-----GDVGPCSPL-TWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILID 216
+ +L + P P T + + + A G++YL+ K VHR++ + N ++
Sbjct: 108 KSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRNLAARNCMVA 164
Query: 217 KHWNPKVSDFGLAKLLGSESSYITTRVMGTFG--YVAPEYASTGMLNERSDVYSFGILIM 274
+ K+ DFG+ + + E+ Y G ++APE G+ SD++SFG+++
Sbjct: 165 HDFTVKIGDFGMTRDI-YETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLW 223
Query: 275 EVISGRIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLD--PKLPEKPTSRLLKRILLVAL 332
E+ S + P + E + K V + G LD PE+ T L R+
Sbjct: 224 EITS------LAEQPYQGLSNEQVLKFVMD---GGYLDQPDNCPERVTD--LMRM----- 267
Query: 333 RCVDPNAQKRPKMGHVVHMLEAQESPSKEPSNSF 366
C N RP +V++L+ PS P SF
Sbjct: 268 -CWQFNPNMRPTFLEIVNLLKDDLHPSF-PEVSF 299
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 89/187 (47%), Gaps = 12/187 (6%)
Query: 105 KVAVKNLLN-NRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLE 163
+VAVK L Q E +F +E I + H+N+VR +G + R ++ E + G+L+
Sbjct: 54 QVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 113
Query: 164 QWLH-GDVGPCSPLTWEI--RMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWN 220
+L P P + + +++ A G YL E +HRDI + N L+
Sbjct: 114 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGP 170
Query: 221 ---PKVSDFGLAKLLGSESSYITTRV-MGTFGYVAPEYASTGMLNERSDVYSFGILIMEV 276
K+ DFG+A+ + S Y M ++ PE G+ ++D +SFG+L+ E+
Sbjct: 171 GRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 230
Query: 277 IS-GRIP 282
S G +P
Sbjct: 231 FSLGYMP 237
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 87/189 (46%), Gaps = 19/189 (10%)
Query: 106 VAVKNLLNNRGQAE-REFKVEVEAIGRV-RHKNLVRLLGYCAE-GAHRMLVYEYVNNGNL 162
VAVK L +E R E++ + + H N+V LLG C + G M++ E+ GNL
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 110
Query: 163 EQWLHGDVGPCSP------------LTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKS 210
+L P LT E + AKG+ +L K +HRD+ +
Sbjct: 111 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAA 167
Query: 211 SNILIDKHWNPKVSDFGLAKLLGSESSYITT-RVMGTFGYVAPEYASTGMLNERSDVYSF 269
NIL+ + K+ DFGLA+ + + + ++APE + +SDV+SF
Sbjct: 168 RNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 227
Query: 270 GILIMEVIS 278
G+L+ E+ S
Sbjct: 228 GVLLWEIFS 236
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 121/250 (48%), Gaps = 32/250 (12%)
Query: 106 VAVKNLLNNRG-QAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K L +A +E E + V + ++ RLLG C + L+ + + G L
Sbjct: 49 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLD 107
Query: 165 WL--HGD-VGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
++ H D +G L W +++ AKG++YL + ++VHRD+ + N+L+ +
Sbjct: 108 YVREHKDNIGSQYLLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHV 158
Query: 222 KVSDFGLAKLLGS-ESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
K++DFG AKLLG+ E Y ++A E + +SDV+S+G+ + E+++ G
Sbjct: 159 KITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 218
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNA 339
P D P E++ I L+K +LP+ P + + ++ +C +A
Sbjct: 219 SKPYD-GIPASEISSI--LEK-----------GERLPQPPICTI--DVYMIMRKCWMIDA 262
Query: 340 QKRPKMGHVV 349
RPK ++
Sbjct: 263 DSRPKFRELI 272
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 87/189 (46%), Gaps = 19/189 (10%)
Query: 106 VAVKNLLNNRGQAE-REFKVEVEAIGRV-RHKNLVRLLGYCAE-GAHRMLVYEYVNNGNL 162
VAVK L +E R E++ + + H N+V LLG C + G M++ E+ GNL
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNL 110
Query: 163 EQWLHGDVGPCSP------------LTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKS 210
+L P LT E + AKG+ +L K +HRD+ +
Sbjct: 111 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAA 167
Query: 211 SNILIDKHWNPKVSDFGLAKLLGSESSYITT-RVMGTFGYVAPEYASTGMLNERSDVYSF 269
NIL+ + K+ DFGLA+ + + + ++APE + +SDV+SF
Sbjct: 168 RNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 227
Query: 270 GILIMEVIS 278
G+L+ E+ S
Sbjct: 228 GVLLWEIFS 236
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 78/147 (53%), Gaps = 13/147 (8%)
Query: 152 LVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSS 211
+ E+++ G+L+Q L + +I + + KGL+YL E + K++HRD+K S
Sbjct: 81 ICMEHMDGGSLDQVLK----KAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPS 134
Query: 212 NILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGI 271
NIL++ K+ DFG++ G + +GT Y++PE + +SD++S G+
Sbjct: 135 NILVNSRGEIKLCDFGVS---GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGL 191
Query: 272 LIMEVISGRIPVDYSRPPEEVNLIEWL 298
++E+ GR P+ PP + +E +
Sbjct: 192 SLVEMAVGRYPI----PPPDAKELELM 214
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 92/185 (49%), Gaps = 15/185 (8%)
Query: 104 SKVAVKNLLNNRGQAER-EFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
++VA+K + ER EF E + ++VRLLG ++G +++ E + G+L
Sbjct: 56 TRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDL 115
Query: 163 EQWLHGDVGPC-------SPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILI 215
+ +L + P +P + + + A G++YL+ K VHRD+ + N ++
Sbjct: 116 KSYLRS-LRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMV 171
Query: 216 DKHWNPKVSDFGLAKLLGSESSYITTRVMGTFG--YVAPEYASTGMLNERSDVYSFGILI 273
+ + K+ DFG+ + + E+ Y G +++PE G+ SDV+SFG+++
Sbjct: 172 AEDFTVKIGDFGMTRDI-YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL 230
Query: 274 MEVIS 278
E+ +
Sbjct: 231 WEIAT 235
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 89/180 (49%), Gaps = 17/180 (9%)
Query: 106 VAVKNLLNNRGQAERE-FKVEVEAIGRVRHKNLVRLLGYCAEGAHR--MLVYEYVNNGNL 162
VAVK L + G R +K E++ + + H+++++ G C + + LV EYV G+L
Sbjct: 46 VAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSL 105
Query: 163 EQWL-HGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
+L +G L + ++ +G++YLH +HR++ + N+L+D
Sbjct: 106 RDYLPRHSIGLAQLLLFAQQI------CEGMAYLHS---QHYIHRNLAARNVLLDNDRLV 156
Query: 222 KVSDFGLAKLLGSESSYITTRVMG---TFGYVAPEYASTGMLNERSDVYSFGILIMEVIS 278
K+ DFGLAK + Y R G F Y APE SDV+SFG+ + E+++
Sbjct: 157 KIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 78/147 (53%), Gaps = 13/147 (8%)
Query: 152 LVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSS 211
+ E+++ G+L+Q L + +I + + KGL+YL E + K++HRD+K S
Sbjct: 81 ICMEHMDGGSLDQVLK----KAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPS 134
Query: 212 NILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGI 271
NIL++ K+ DFG++ G + +GT Y++PE + +SD++S G+
Sbjct: 135 NILVNSRGEIKLCDFGVS---GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGL 191
Query: 272 LIMEVISGRIPVDYSRPPEEVNLIEWL 298
++E+ GR P+ PP + +E +
Sbjct: 192 SLVEMAVGRYPI----PPPDAKELELM 214
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 92/184 (50%), Gaps = 13/184 (7%)
Query: 104 SKVAVKNLLNNRGQAER-EFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
++VA+K + ER EF E + ++VRLLG ++G +++ E + G+L
Sbjct: 56 TRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDL 115
Query: 163 EQWLHG-----DVGPC-SPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILID 216
+ +L + P +P + + + A G++YL+ K VHRD+ + N ++
Sbjct: 116 KSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVA 172
Query: 217 KHWNPKVSDFGLAKLLGSESSYITTRVMGTFG--YVAPEYASTGMLNERSDVYSFGILIM 274
+ + K+ DFG+ + + E+ Y G +++PE G+ SDV+SFG+++
Sbjct: 173 EDFTVKIGDFGMTRDI-YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLW 231
Query: 275 EVIS 278
E+ +
Sbjct: 232 EIAT 235
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 108/217 (49%), Gaps = 34/217 (15%)
Query: 115 RGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEG--AHRMLVYEYVNNGNLEQWLHGDVGP 172
RG E+ ++ E+ + ++ H N+V+L+ + H +V+E VN G + + V
Sbjct: 77 RGPIEQVYQ-EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVME-----VPT 130
Query: 173 CSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLA-KL 231
PL+ + KG+ YLH K++HRDIK SN+L+ + + K++DFG++ +
Sbjct: 131 LKPLSEDQARFYFQDLIKGIEYLHY---QKIIHRDIKPSNLLVGEDGHIKIADFGVSNEF 187
Query: 232 LGSESSYITTRVMGTFGYVAPEYASTG---MLNERSDVYSFGILIMEVISGRIPVDYSRP 288
GS++ + + +GT ++APE S + DV++ G+ + + G+ P R
Sbjct: 188 KGSDA--LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERI 245
Query: 289 --------------PEEVNLIEWLKKMVT---NRNPE 308
P++ ++ E LK ++T ++NPE
Sbjct: 246 MCLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPE 282
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 78/147 (53%), Gaps = 13/147 (8%)
Query: 152 LVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSS 211
+ E+++ G+L+Q L + EI + + +GL+YL E + +++HRD+K S
Sbjct: 91 ICMEHMDGGSLDQVLK----EAKRIPEEILGKVSIAVLRGLAYLRE--KHQIMHRDVKPS 144
Query: 212 NILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGI 271
NIL++ K+ DFG++ G + +GT Y+APE + +SD++S G+
Sbjct: 145 NILVNSRGEIKLCDFGVS---GQLIDSMANSFVGTRSYMAPERLQGTHYSVQSDIWSMGL 201
Query: 272 LIMEVISGRIPVDYSRPPEEVNLIEWL 298
++E+ GR P+ PP + +E +
Sbjct: 202 SLVELAVGRYPI----PPPDAKELEAI 224
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 87/189 (46%), Gaps = 19/189 (10%)
Query: 106 VAVKNLLNNRGQAE-REFKVEVEAIGRV-RHKNLVRLLGYCAE-GAHRMLVYEYVNNGNL 162
VAVK L +E R E++ + + H N+V LLG C + G M++ E+ GNL
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 163 EQWLHGDVGPCSP------------LTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKS 210
+L P LT E + AKG+ +L K +HRD+ +
Sbjct: 120 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAA 176
Query: 211 SNILIDKHWNPKVSDFGLAKLLGSESSYITT-RVMGTFGYVAPEYASTGMLNERSDVYSF 269
NIL+ + K+ DFGLA+ + + + ++APE + +SDV+SF
Sbjct: 177 RNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 236
Query: 270 GILIMEVIS 278
G+L+ E+ S
Sbjct: 237 GVLLWEIFS 245
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 78/147 (53%), Gaps = 13/147 (8%)
Query: 152 LVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSS 211
+ E+++ G+L+Q L + +I + + KGL+YL E + K++HRD+K S
Sbjct: 81 ICMEHMDGGSLDQVLK----KAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPS 134
Query: 212 NILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGI 271
NIL++ K+ DFG++ G + +GT Y++PE + +SD++S G+
Sbjct: 135 NILVNSRGEIKLCDFGVS---GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGL 191
Query: 272 LIMEVISGRIPVDYSRPPEEVNLIEWL 298
++E+ GR P+ PP + +E +
Sbjct: 192 SLVEMAVGRYPI----PPPDAKELELM 214
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 78/147 (53%), Gaps = 13/147 (8%)
Query: 152 LVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSS 211
+ E+++ G+L+Q L + +I + + KGL+YL E + K++HRD+K S
Sbjct: 81 ICMEHMDGGSLDQVLK----KAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPS 134
Query: 212 NILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGI 271
NIL++ K+ DFG++ G + +GT Y++PE + +SD++S G+
Sbjct: 135 NILVNSRGEIKLCDFGVS---GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGL 191
Query: 272 LIMEVISGRIPVDYSRPPEEVNLIEWL 298
++E+ GR P+ PP + +E +
Sbjct: 192 SLVEMAVGRYPI----PPPDAKELELM 214
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 89/180 (49%), Gaps = 17/180 (9%)
Query: 106 VAVKNLLNNRGQAERE-FKVEVEAIGRVRHKNLVRLLGYCAEGAHR--MLVYEYVNNGNL 162
VAVK L + G R +K E++ + + H+++++ G C + + LV EYV G+L
Sbjct: 46 VAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSL 105
Query: 163 EQWL-HGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
+L +G L + ++ +G++YLH +HR++ + N+L+D
Sbjct: 106 RDYLPRHSIGLAQLLLFAQQI------CEGMAYLHA---QHYIHRNLAARNVLLDNDRLV 156
Query: 222 KVSDFGLAKLLGSESSYITTRVMG---TFGYVAPEYASTGMLNERSDVYSFGILIMEVIS 278
K+ DFGLAK + Y R G F Y APE SDV+SFG+ + E+++
Sbjct: 157 KIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 114/242 (47%), Gaps = 31/242 (12%)
Query: 105 KVAVKNLLNNRGQAEREFKV-EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLE 163
+VA++ + N + Q ++E + E+ + ++ N+V L G +V EY+ G+L
Sbjct: 48 EVAIRQM-NLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT 106
Query: 164 QWLH---GDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWN 220
+ D G + + E + L +LH +V+HR+IKS NIL+ +
Sbjct: 107 DVVTETCMDEGQIAAVCRE--------CLQALEFLHSN---QVIHRNIKSDNILLGMDGS 155
Query: 221 PKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGR 280
K++DFG + E S +T V GT ++APE + + D++S GI+ +E+I G
Sbjct: 156 VKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214
Query: 281 IPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNAQ 340
P P + LI TN PE + PEK S + + L RC++ + +
Sbjct: 215 PPYLNENPLRALYLI------ATNGTPE----LQNPEK-LSAIFRDFL---NRCLEMDVE 260
Query: 341 KR 342
KR
Sbjct: 261 KR 262
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 93/185 (50%), Gaps = 22/185 (11%)
Query: 105 KVAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+VAVK L + A+R ++ E+ + ++H+N++ LL R L E N+
Sbjct: 49 RVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDVY 103
Query: 162 LEQWLHG----DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
L L G ++ C LT + +I +GL Y+H ++HRD+K SN+ +++
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNE 160
Query: 218 HWNPKVSDFGLAKLLGSE-SSYITTRVMGTFGYVAPEYASTGM-LNERSDVYSFGILIME 275
K+ DFGLA+ E + Y+ TR Y APE M N+ D++S G ++ E
Sbjct: 161 DCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNAMHYNQTVDIWSVGCIMAE 215
Query: 276 VISGR 280
+++GR
Sbjct: 216 LLTGR 220
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 114/242 (47%), Gaps = 31/242 (12%)
Query: 105 KVAVKNLLNNRGQAEREFKV-EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLE 163
+VA++ + N + Q ++E + E+ + ++ N+V L G +V EY+ G+L
Sbjct: 48 EVAIRQM-NLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT 106
Query: 164 QWLH---GDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWN 220
+ D G + + E + L +LH +V+HRDIKS NIL+ +
Sbjct: 107 DVVTETCMDEGQIAAVCRE--------CLQALEFLHSN---QVIHRDIKSDNILLGMDGS 155
Query: 221 PKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGR 280
K++DFG + E S + ++GT ++APE + + D++S GI+ +E+I G
Sbjct: 156 VKLTDFGFCAQITPEQSK-RSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214
Query: 281 IPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNAQ 340
P P + LI TN PE + PEK S + + L RC++ + +
Sbjct: 215 PPYLNENPLRALYLI------ATNGTPE----LQNPEK-LSAIFRDFL---NRCLEMDVE 260
Query: 341 KR 342
KR
Sbjct: 261 KR 262
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 92/184 (50%), Gaps = 13/184 (7%)
Query: 104 SKVAVKNLLNNRGQAER-EFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
++VA+K + ER EF E + ++VRLLG ++G +++ E + G+L
Sbjct: 49 TRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDL 108
Query: 163 EQWLHG-----DVGPC-SPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILID 216
+ +L + P +P + + + A G++YL+ K VHRD+ + N ++
Sbjct: 109 KSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVA 165
Query: 217 KHWNPKVSDFGLAKLLGSESSYITTRVMGTFG--YVAPEYASTGMLNERSDVYSFGILIM 274
+ + K+ DFG+ + + E+ Y G +++PE G+ SDV+SFG+++
Sbjct: 166 EDFTVKIGDFGMTRDI-YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLW 224
Query: 275 EVIS 278
E+ +
Sbjct: 225 EIAT 228
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 88/185 (47%), Gaps = 12/185 (6%)
Query: 106 VAVKNLLNNRGQAEREFKV-EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VAVK + + R Q RE EV + +H+N+V + G +V E++ G L
Sbjct: 179 VAVKKM-DLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT- 236
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
D+ + + E + L + LS LH V+HRDIKS +IL+ K+S
Sbjct: 237 ----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLS 289
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVD 284
DFG + E ++GT ++APE S D++S GI+++E++ G P
Sbjct: 290 DFGFCAQVSKEVPR-RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY- 347
Query: 285 YSRPP 289
++ PP
Sbjct: 348 FNEPP 352
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 92/184 (50%), Gaps = 13/184 (7%)
Query: 104 SKVAVKNLLNNRGQAER-EFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
++VA+K + ER EF E + ++VRLLG ++G +++ E + G+L
Sbjct: 47 TRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDL 106
Query: 163 EQWLHG-----DVGPC-SPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILID 216
+ +L + P +P + + + A G++YL+ K VHRD+ + N ++
Sbjct: 107 KSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVA 163
Query: 217 KHWNPKVSDFGLAKLLGSESSYITTRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIM 274
+ + K+ DFG+ + + E+ Y G +++PE G+ SDV+SFG+++
Sbjct: 164 EDFTVKIGDFGMTRDI-YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLW 222
Query: 275 EVIS 278
E+ +
Sbjct: 223 EIAT 226
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 92/184 (50%), Gaps = 13/184 (7%)
Query: 104 SKVAVKNLLNNRGQAER-EFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
++VA+K + ER EF E + ++VRLLG ++G +++ E + G+L
Sbjct: 43 TRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDL 102
Query: 163 EQWLHG-----DVGPC-SPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILID 216
+ +L + P +P + + + A G++YL+ K VHRD+ + N ++
Sbjct: 103 KSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVA 159
Query: 217 KHWNPKVSDFGLAKLLGSESSYITTRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIM 274
+ + K+ DFG+ + + E+ Y G +++PE G+ SDV+SFG+++
Sbjct: 160 EDFTVKIGDFGMTRDI-YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLW 218
Query: 275 EVIS 278
E+ +
Sbjct: 219 EIAT 222
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 92/184 (50%), Gaps = 13/184 (7%)
Query: 104 SKVAVKNLLNNRGQAER-EFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
++VA+K + ER EF E + ++VRLLG ++G +++ E + G+L
Sbjct: 50 TRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDL 109
Query: 163 EQWLHG-----DVGPC-SPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILID 216
+ +L + P +P + + + A G++YL+ K VHRD+ + N ++
Sbjct: 110 KSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVA 166
Query: 217 KHWNPKVSDFGLAKLLGSESSYITTRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIM 274
+ + K+ DFG+ + + E+ Y G +++PE G+ SDV+SFG+++
Sbjct: 167 EDFTVKIGDFGMTRDI-YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLW 225
Query: 275 EVIS 278
E+ +
Sbjct: 226 EIAT 229
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 92/184 (50%), Gaps = 13/184 (7%)
Query: 104 SKVAVKNLLNNRGQAER-EFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
++VA+K + ER EF E + ++VRLLG ++G +++ E + G+L
Sbjct: 49 TRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDL 108
Query: 163 EQWLHG-----DVGPC-SPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILID 216
+ +L + P +P + + + A G++YL+ K VHRD+ + N ++
Sbjct: 109 KSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVA 165
Query: 217 KHWNPKVSDFGLAKLLGSESSYITTRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIM 274
+ + K+ DFG+ + + E+ Y G +++PE G+ SDV+SFG+++
Sbjct: 166 EDFTVKIGDFGMTRDI-YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLW 224
Query: 275 EVIS 278
E+ +
Sbjct: 225 EIAT 228
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 92/185 (49%), Gaps = 15/185 (8%)
Query: 104 SKVAVKNLLNNRGQAER-EFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
++VA+K + ER EF E + ++VRLLG ++G +++ E + G+L
Sbjct: 46 TRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDL 105
Query: 163 EQWLHGDVGPC-------SPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILI 215
+ +L + P +P + + + A G++YL+ K VHRD+ + N ++
Sbjct: 106 KSYLRS-LRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMV 161
Query: 216 DKHWNPKVSDFGLAKLLGSESSYITTRVMGTF--GYVAPEYASTGMLNERSDVYSFGILI 273
+ + K+ DFG+ + + E+ Y G +++PE G+ SDV+SFG+++
Sbjct: 162 AEDFTVKIGDFGMTRDI-YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL 220
Query: 274 MEVIS 278
E+ +
Sbjct: 221 WEIAT 225
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 88/185 (47%), Gaps = 12/185 (6%)
Query: 106 VAVKNLLNNRGQAEREFKV-EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VAVK + + R Q RE EV + +H+N+V + G +V E++ G L
Sbjct: 57 VAVKKM-DLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT- 114
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
D+ + + E + L + LS LH V+HRDIKS +IL+ K+S
Sbjct: 115 ----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLS 167
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVD 284
DFG + E ++GT ++APE S D++S GI+++E++ G P
Sbjct: 168 DFGFCAQVSKEVPR-RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY- 225
Query: 285 YSRPP 289
++ PP
Sbjct: 226 FNEPP 230
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 103/225 (45%), Gaps = 19/225 (8%)
Query: 106 VAVKNLLNNRGQAEREFKV-EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VAVK + + R Q RE EV + +H+N+V + G +V E++ G L
Sbjct: 48 VAVKKM-DLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT- 105
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
D+ + + E + L + LS LH V+HRDIKS +IL+ K+S
Sbjct: 106 ----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLS 158
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVD 284
DFG + E ++GT ++APE S D++S GI+++E++ G P
Sbjct: 159 DFGFCAQVSKEVPR-RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY- 216
Query: 285 YSRPPEEV------NLIEWLKKM-VTNRNPEGVLDPKLPEKPTSR 322
++ PP + NL LK + + + +G LD L P R
Sbjct: 217 FNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQR 261
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 103/225 (45%), Gaps = 19/225 (8%)
Query: 106 VAVKNLLNNRGQAEREFKV-EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VAVK + + R Q RE EV + +H+N+V + G +V E++ G L
Sbjct: 52 VAVKKM-DLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT- 109
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
D+ + + E + L + LS LH V+HRDIKS +IL+ K+S
Sbjct: 110 ----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLS 162
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVD 284
DFG + E ++GT ++APE S D++S GI+++E++ G P
Sbjct: 163 DFGFCAQVSKEVPR-RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY- 220
Query: 285 YSRPPEEV------NLIEWLKKM-VTNRNPEGVLDPKLPEKPTSR 322
++ PP + NL LK + + + +G LD L P R
Sbjct: 221 FNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQR 265
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 88/185 (47%), Gaps = 12/185 (6%)
Query: 106 VAVKNLLNNRGQAEREFKV-EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VAVK + + R Q RE EV + +H+N+V + G +V E++ G L
Sbjct: 59 VAVKKM-DLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT- 116
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
D+ + + E + L + LS LH V+HRDIKS +IL+ K+S
Sbjct: 117 ----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLS 169
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVD 284
DFG + E ++GT ++APE S D++S GI+++E++ G P
Sbjct: 170 DFGFCAQVSKEVPR-RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY- 227
Query: 285 YSRPP 289
++ PP
Sbjct: 228 FNEPP 232
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 119/277 (42%), Gaps = 57/277 (20%)
Query: 121 EFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPC----SPL 176
E + EV + ++H N+V+ E +V +Y G+L + ++ G L
Sbjct: 69 ESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQIL 128
Query: 177 TWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSES 236
W +++ + L ++H+ K++HRDIKS NI + K ++ DFG+A++L S +
Sbjct: 129 DWFVQICL------ALKHVHD---RKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS-T 178
Query: 237 SYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGI-------------------LIMEVI 277
+ +GT Y++PE N +SD+++ G L++++I
Sbjct: 179 VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKII 238
Query: 278 SGRIPVDYSRPPEEVNLIEWLKKMVTN---RNPE------GVLDPKLPEKPTSRLLKRIL 328
SG S PP ++ L+ +V+ RNP +L+ K + L L
Sbjct: 239 SG------SFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKRIEKFLSPQL 292
Query: 329 LVALRCV--------DPNAQKRPKMGH-VVHMLEAQE 356
+ C+ P KRP G + ++ AQ+
Sbjct: 293 IAEEFCLKTFSKFGSQPIPAKRPASGQNSISVMPAQK 329
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 84/165 (50%), Gaps = 17/165 (10%)
Query: 152 LVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSS 211
+ E+++ G+L+Q L + +I + + KGL+YL E + K++HRD+K S
Sbjct: 100 ICMEHMDGGSLDQVLK----KAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPS 153
Query: 212 NILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGI 271
NIL++ K+ DFG++ G + +GT Y++PE + +SD++S G+
Sbjct: 154 NILVNSRGEIKLCDFGVS---GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGL 210
Query: 272 LIMEVISGRIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLP 316
++E+ GR P+ + + E L +V N P PKLP
Sbjct: 211 SLVEMAVGRYPI--GSGSGSMAIFELLDYIV-NEPP-----PKLP 247
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 93/185 (50%), Gaps = 22/185 (11%)
Query: 105 KVAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+VAVK L + A+R ++ E+ + ++H+N++ LL R L E N+
Sbjct: 56 RVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDVY 110
Query: 162 LEQWLHG----DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
L L G ++ C LT + +I +GL Y+H ++HRD+K SN+ +++
Sbjct: 111 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNE 167
Query: 218 HWNPKVSDFGLAKLLGSE-SSYITTRVMGTFGYVAPEYASTGM-LNERSDVYSFGILIME 275
K+ DFGLA+ E + Y+ TR Y APE M N+ D++S G ++ E
Sbjct: 168 DCELKILDFGLARHTADEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAE 222
Query: 276 VISGR 280
+++GR
Sbjct: 223 LLTGR 227
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 88/185 (47%), Gaps = 12/185 (6%)
Query: 106 VAVKNLLNNRGQAEREFKV-EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VAVK + + R Q RE EV + +H+N+V + G +V E++ G L
Sbjct: 102 VAVKKM-DLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT- 159
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
D+ + + E + L + LS LH V+HRDIKS +IL+ K+S
Sbjct: 160 ----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLS 212
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVD 284
DFG + E ++GT ++APE S D++S GI+++E++ G P
Sbjct: 213 DFGFCAQVSKEVPR-RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY- 270
Query: 285 YSRPP 289
++ PP
Sbjct: 271 FNEPP 275
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 92/184 (50%), Gaps = 13/184 (7%)
Query: 104 SKVAVKNLLNNRGQAER-EFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
++VA+K + ER EF E + ++VRLLG ++G +++ E + G+L
Sbjct: 78 TRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDL 137
Query: 163 EQWLHG-----DVGPC-SPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILID 216
+ +L + P +P + + + A G++YL+ K VHRD+ + N ++
Sbjct: 138 KSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVA 194
Query: 217 KHWNPKVSDFGLAKLLGSESSYITTRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIM 274
+ + K+ DFG+ + + E+ Y G +++PE G+ SDV+SFG+++
Sbjct: 195 EDFTVKIGDFGMTRDI-YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLW 253
Query: 275 EVIS 278
E+ +
Sbjct: 254 EIAT 257
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 93/185 (50%), Gaps = 22/185 (11%)
Query: 105 KVAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+VAVK L + A+R ++ E+ + ++H+N++ LL R L E N+
Sbjct: 56 RVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDVY 110
Query: 162 LEQWLHG----DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
L L G ++ C LT + +I +GL Y+H ++HRD+K SN+ +++
Sbjct: 111 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNE 167
Query: 218 HWNPKVSDFGLAKLLGSE-SSYITTRVMGTFGYVAPEYASTGM-LNERSDVYSFGILIME 275
K+ DFGLA+ E + Y+ TR Y APE M N+ D++S G ++ E
Sbjct: 168 DCELKILDFGLARHTADEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAE 222
Query: 276 VISGR 280
+++GR
Sbjct: 223 LLTGR 227
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 93/185 (50%), Gaps = 22/185 (11%)
Query: 105 KVAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+VAVK L + A+R ++ E+ + ++H+N++ LL R L E N+
Sbjct: 56 RVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDVY 110
Query: 162 LEQWLHG----DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
L L G ++ C LT + +I +GL Y+H ++HRD+K SN+ +++
Sbjct: 111 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNE 167
Query: 218 HWNPKVSDFGLAKLLGSE-SSYITTRVMGTFGYVAPEYASTGM-LNERSDVYSFGILIME 275
K+ DFGLA+ E + Y+ TR Y APE M N+ D++S G ++ E
Sbjct: 168 DCELKILDFGLARHTADEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAE 222
Query: 276 VISGR 280
+++GR
Sbjct: 223 LLTGR 227
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 88/187 (47%), Gaps = 12/187 (6%)
Query: 105 KVAVKNLLN-NRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLE 163
+VAVK L Q E +F +E I + H+N+VR +G + R ++ E + G+L+
Sbjct: 80 QVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 139
Query: 164 QWLH-GDVGPCSPLTWEI--RMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWN 220
+L P P + + +++ A G YL E +HRDI + N L+
Sbjct: 140 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGP 196
Query: 221 ---PKVSDFGLAKLLGSESSYITTRV-MGTFGYVAPEYASTGMLNERSDVYSFGILIMEV 276
K+ DFG+A+ + Y M ++ PE G+ ++D +SFG+L+ E+
Sbjct: 197 GRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 256
Query: 277 IS-GRIP 282
S G +P
Sbjct: 257 FSLGYMP 263
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 88/187 (47%), Gaps = 12/187 (6%)
Query: 105 KVAVKNLLN-NRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLE 163
+VAVK L Q E +F +E I + H+N+VR +G + R ++ E + G+L+
Sbjct: 103 QVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 162
Query: 164 QWLH-GDVGPCSPLTWEI--RMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWN 220
+L P P + + +++ A G YL E +HRDI + N L+
Sbjct: 163 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGP 219
Query: 221 ---PKVSDFGLAKLLGSESSYITTRV-MGTFGYVAPEYASTGMLNERSDVYSFGILIMEV 276
K+ DFG+A+ + Y M ++ PE G+ ++D +SFG+L+ E+
Sbjct: 220 GRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 279
Query: 277 IS-GRIP 282
S G +P
Sbjct: 280 FSLGYMP 286
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 26/258 (10%)
Query: 105 KVAVKNLLNNRGQAER-EFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLE 163
KVA+K + + Q E E++A+ + H N+V LV + ++ G++
Sbjct: 37 KVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVL 96
Query: 164 QWLHGDVGP----CSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHW 219
+ V L I+ +GL YLH+ + +HRD+K+ NIL+ +
Sbjct: 97 DIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDG 153
Query: 220 NPKVSDFGLAKLLGSESSYITTRVMGTF----GYVAPEYA-STGMLNERSDVYSFGILIM 274
+ +++DFG++ L + +V TF ++APE + ++D++SFGI +
Sbjct: 154 SVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAI 213
Query: 275 EVISGRIPVDYSRPPEEVNLIEWLKKMVTNRNPE---GVLDPKLPEKPTSRLLKRILLVA 331
E+ +G P + PP +V ++ + N P GV D ++ +K K I L
Sbjct: 214 ELATGAAPY-HKYPPMKVLML-----TLQNDPPSLETGVQDKEMLKKYGKSFRKMISL-- 265
Query: 332 LRCVDPNAQKRPKMGHVV 349
C+ + +KRP ++
Sbjct: 266 --CLQKDPEKRPTAAELL 281
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 94/185 (50%), Gaps = 22/185 (11%)
Query: 105 KVAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+VAVK L + A+R ++ E+ + ++H+N++ LL R L E N+
Sbjct: 45 RVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDVY 99
Query: 162 LEQWLHG----DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
L L G ++ C+ LT + +I +GL Y+H ++HRD+K SN+ +++
Sbjct: 100 LVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNE 156
Query: 218 HWNPKVSDFGLAKLLGSE-SSYITTRVMGTFGYVAPEYASTGM-LNERSDVYSFGILIME 275
K+ DFGLA+ E + Y+ TR Y APE M N+ D++S G ++ E
Sbjct: 157 DCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAE 211
Query: 276 VISGR 280
+++GR
Sbjct: 212 LLTGR 216
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 93/185 (50%), Gaps = 22/185 (11%)
Query: 105 KVAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+VAVK L + A+R ++ E+ + ++H+N++ LL R L E N+
Sbjct: 55 RVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDVY 109
Query: 162 LEQWLHG----DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
L L G ++ C LT + +I +GL Y+H ++HRD+K SN+ +++
Sbjct: 110 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNE 166
Query: 218 HWNPKVSDFGLAKLLGSE-SSYITTRVMGTFGYVAPEYASTGM-LNERSDVYSFGILIME 275
K+ DFGLA+ E + Y+ TR Y APE M N+ D++S G ++ E
Sbjct: 167 DCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAE 221
Query: 276 VISGR 280
+++GR
Sbjct: 222 LLTGR 226
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 87/180 (48%), Gaps = 17/180 (9%)
Query: 106 VAVKNLLNNRG-QAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHR--MLVYEYVNNGNL 162
VAVK L G Q ++ E+E + + H+++V+ G C + + LV EYV G+L
Sbjct: 40 VAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSL 99
Query: 163 EQWL-HGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
+L VG L + ++ +G++YLH +HR + + N+L+D
Sbjct: 100 RDYLPRHCVGLAQLLLFAQQI------CEGMAYLHA---QHYIHRALAARNVLLDNDRLV 150
Query: 222 KVSDFGLAKLLGSESSYITTRVMG---TFGYVAPEYASTGMLNERSDVYSFGILIMEVIS 278
K+ DFGLAK + Y R G F Y APE SDV+SFG+ + E+++
Sbjct: 151 KIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 93/185 (50%), Gaps = 22/185 (11%)
Query: 105 KVAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+VAVK L + A+R ++ E+ + ++H+N++ LL R L E N+
Sbjct: 55 RVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDVY 109
Query: 162 LEQWLHG----DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
L L G ++ C LT + +I +GL Y+H ++HRD+K SN+ +++
Sbjct: 110 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNE 166
Query: 218 HWNPKVSDFGLAKLLGSE-SSYITTRVMGTFGYVAPEYASTGM-LNERSDVYSFGILIME 275
K+ DFGLA+ E + Y+ TR Y APE M N+ D++S G ++ E
Sbjct: 167 DCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAE 221
Query: 276 VISGR 280
+++GR
Sbjct: 222 LLTGR 226
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 93/185 (50%), Gaps = 22/185 (11%)
Query: 105 KVAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+VAVK L + A+R ++ E+ + ++H+N++ LL R L E N+
Sbjct: 49 RVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDVY 103
Query: 162 LEQWLHG----DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
L L G ++ C LT + +I +GL Y+H ++HRD+K SN+ +++
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNE 160
Query: 218 HWNPKVSDFGLAKLLGSE-SSYITTRVMGTFGYVAPEYASTGM-LNERSDVYSFGILIME 275
K+ DFGLA+ E + Y+ TR Y APE M N+ D++S G ++ E
Sbjct: 161 DCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAE 215
Query: 276 VISGR 280
+++GR
Sbjct: 216 LLTGR 220
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 93/185 (50%), Gaps = 22/185 (11%)
Query: 105 KVAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+VAVK L + A+R ++ E+ + ++H+N++ LL R L E N+
Sbjct: 49 RVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDVY 103
Query: 162 LEQWLHG----DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
L L G ++ C LT + +I +GL Y+H ++HRD+K SN+ +++
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNE 160
Query: 218 HWNPKVSDFGLAKLLGSE-SSYITTRVMGTFGYVAPEYASTGM-LNERSDVYSFGILIME 275
K+ DFGLA+ E + Y+ TR Y APE M N+ D++S G ++ E
Sbjct: 161 DCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAE 215
Query: 276 VISGR 280
+++GR
Sbjct: 216 LLTGR 220
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 93/185 (50%), Gaps = 22/185 (11%)
Query: 105 KVAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+VAVK L + A+R ++ E+ + ++H+N++ LL R L E N+
Sbjct: 49 RVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDVY 103
Query: 162 LEQWLHG----DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
L L G ++ C LT + +I +GL Y+H ++HRD+K SN+ +++
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNE 160
Query: 218 HWNPKVSDFGLAKLLGSE-SSYITTRVMGTFGYVAPEYASTGM-LNERSDVYSFGILIME 275
K+ DFGLA+ E + Y+ TR Y APE M N+ D++S G ++ E
Sbjct: 161 DCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAE 215
Query: 276 VISGR 280
+++GR
Sbjct: 216 LLTGR 220
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 87/180 (48%), Gaps = 17/180 (9%)
Query: 106 VAVKNLLNNRG-QAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHR--MLVYEYVNNGNL 162
VAVK L G Q ++ E+E + + H+++V+ G C + + LV EYV G+L
Sbjct: 41 VAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSL 100
Query: 163 EQWL-HGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
+L VG L + ++ +G++YLH +HR + + N+L+D
Sbjct: 101 RDYLPRHCVGLAQLLLFAQQI------CEGMAYLHA---QHYIHRALAARNVLLDNDRLV 151
Query: 222 KVSDFGLAKLLGSESSYITTRVMG---TFGYVAPEYASTGMLNERSDVYSFGILIMEVIS 278
K+ DFGLAK + Y R G F Y APE SDV+SFG+ + E+++
Sbjct: 152 KIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 93/185 (50%), Gaps = 22/185 (11%)
Query: 105 KVAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+VAVK L + A+R ++ E+ + ++H+N++ LL R L E N+
Sbjct: 59 RVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDVY 113
Query: 162 LEQWLHG----DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
L L G ++ C LT + +I +GL Y+H ++HRD+K SN+ +++
Sbjct: 114 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNE 170
Query: 218 HWNPKVSDFGLAKLLGSE-SSYITTRVMGTFGYVAPEYASTGM-LNERSDVYSFGILIME 275
K+ DFGLA+ E + Y+ TR Y APE M N+ D++S G ++ E
Sbjct: 171 DCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAE 225
Query: 276 VISGR 280
+++GR
Sbjct: 226 LLTGR 230
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 93/185 (50%), Gaps = 22/185 (11%)
Query: 105 KVAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+VAVK L + A+R ++ E+ + ++H+N++ LL R L E N+
Sbjct: 49 RVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDVY 103
Query: 162 LEQWLHG----DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
L L G ++ C LT + +I +GL Y+H ++HRD+K SN+ +++
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNE 160
Query: 218 HWNPKVSDFGLAKLLGSE-SSYITTRVMGTFGYVAPEYASTGM-LNERSDVYSFGILIME 275
K+ DFGLA+ E + Y+ TR Y APE M N+ D++S G ++ E
Sbjct: 161 DCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAE 215
Query: 276 VISGR 280
+++GR
Sbjct: 216 LLTGR 220
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 93/185 (50%), Gaps = 22/185 (11%)
Query: 105 KVAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+VAVK L + A+R ++ E+ + ++H+N++ LL R L E N+
Sbjct: 49 RVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDVY 103
Query: 162 LEQWLHG----DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
L L G ++ C LT + +I +GL Y+H ++HRD+K SN+ +++
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNE 160
Query: 218 HWNPKVSDFGLAKLLGSE-SSYITTRVMGTFGYVAPEYASTGM-LNERSDVYSFGILIME 275
K+ DFGLA+ E + Y+ TR Y APE M N+ D++S G ++ E
Sbjct: 161 DCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAE 215
Query: 276 VISGR 280
+++GR
Sbjct: 216 LLTGR 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 93/185 (50%), Gaps = 22/185 (11%)
Query: 105 KVAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+VAVK L + A+R ++ E+ + ++H+N++ LL R L E N+
Sbjct: 49 RVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDVY 103
Query: 162 LEQWLHG----DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
L L G ++ C LT + +I +GL Y+H ++HRD+K SN+ +++
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNE 160
Query: 218 HWNPKVSDFGLAKLLGSE-SSYITTRVMGTFGYVAPEYASTGM-LNERSDVYSFGILIME 275
K+ DFGLA+ E + Y+ TR Y APE M N+ D++S G ++ E
Sbjct: 161 DCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAE 215
Query: 276 VISGR 280
+++GR
Sbjct: 216 LLTGR 220
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 93/185 (50%), Gaps = 22/185 (11%)
Query: 105 KVAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+VAVK L + A+R ++ E+ + ++H+N++ LL R L E N+
Sbjct: 54 RVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDVY 108
Query: 162 LEQWLHG----DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
L L G ++ C LT + +I +GL Y+H ++HRD+K SN+ +++
Sbjct: 109 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNE 165
Query: 218 HWNPKVSDFGLAKLLGSE-SSYITTRVMGTFGYVAPEYASTGM-LNERSDVYSFGILIME 275
K+ DFGLA+ E + Y+ TR Y APE M N+ D++S G ++ E
Sbjct: 166 DCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAE 220
Query: 276 VISGR 280
+++GR
Sbjct: 221 LLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 93/185 (50%), Gaps = 22/185 (11%)
Query: 105 KVAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+VAVK L + A+R ++ E+ + ++H+N++ LL R L E N+
Sbjct: 48 RVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDVY 102
Query: 162 LEQWLHG----DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
L L G ++ C LT + +I +GL Y+H ++HRD+K SN+ +++
Sbjct: 103 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNE 159
Query: 218 HWNPKVSDFGLAKLLGSE-SSYITTRVMGTFGYVAPEYASTGM-LNERSDVYSFGILIME 275
K+ DFGLA+ E + Y+ TR Y APE M N+ D++S G ++ E
Sbjct: 160 DCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAE 214
Query: 276 VISGR 280
+++GR
Sbjct: 215 LLTGR 219
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 92/183 (50%), Gaps = 11/183 (6%)
Query: 104 SKVAVKNLLNNRGQAER-EFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
++VA+K + ER EF E + ++VRLLG ++G +++ E + G+L
Sbjct: 41 TRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDL 100
Query: 163 EQWLHG-----DVGPC-SPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILID 216
+ +L + P +P + + + A G++YL+ K VHRD+ + N ++
Sbjct: 101 KSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVA 157
Query: 217 KHWNPKVSDFGLAK-LLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIME 275
+ + K+ DFG+ + + ++ + + +++PE G+ SDV+SFG+++ E
Sbjct: 158 EDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWE 217
Query: 276 VIS 278
+ +
Sbjct: 218 IAT 220
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 93/185 (50%), Gaps = 22/185 (11%)
Query: 105 KVAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+VAVK L + A+R ++ E+ + ++H+N++ LL R L E N+
Sbjct: 56 RVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDVY 110
Query: 162 LEQWLHG----DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
L L G ++ C LT + +I +GL Y+H ++HRD+K SN+ +++
Sbjct: 111 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNE 167
Query: 218 HWNPKVSDFGLAKLLGSE-SSYITTRVMGTFGYVAPEYASTGM-LNERSDVYSFGILIME 275
K+ DFGLA+ E + Y+ TR Y APE M N+ D++S G ++ E
Sbjct: 168 DCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAE 222
Query: 276 VISGR 280
+++GR
Sbjct: 223 LLTGR 227
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 93/185 (50%), Gaps = 22/185 (11%)
Query: 105 KVAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+VAVK L + A+R ++ E+ + ++H+N++ LL R L E N+
Sbjct: 54 RVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDVY 108
Query: 162 LEQWLHG----DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
L L G ++ C LT + +I +GL Y+H ++HRD+K SN+ +++
Sbjct: 109 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNE 165
Query: 218 HWNPKVSDFGLAKLLGSE-SSYITTRVMGTFGYVAPEYASTGM-LNERSDVYSFGILIME 275
K+ DFGLA+ E + Y+ TR Y APE M N+ D++S G ++ E
Sbjct: 166 DCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAE 220
Query: 276 VISGR 280
+++GR
Sbjct: 221 LLTGR 225
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 93/185 (50%), Gaps = 22/185 (11%)
Query: 105 KVAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+VAVK L + A+R ++ E+ + ++H+N++ LL R L E N+
Sbjct: 51 RVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDVY 105
Query: 162 LEQWLHG----DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
L L G ++ C LT + +I +GL Y+H ++HRD+K SN+ +++
Sbjct: 106 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNE 162
Query: 218 HWNPKVSDFGLAKLLGSE-SSYITTRVMGTFGYVAPEYASTGM-LNERSDVYSFGILIME 275
K+ DFGLA+ E + Y+ TR Y APE M N+ D++S G ++ E
Sbjct: 163 DCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAE 217
Query: 276 VISGR 280
+++GR
Sbjct: 218 LLTGR 222
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 104/221 (47%), Gaps = 32/221 (14%)
Query: 102 DNSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+N K+++K+ + +FK E++ I ++++ + G ++YEY+ N +
Sbjct: 77 NNDKISIKSKYD-------DFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDS 129
Query: 162 L----EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
+ E + D + ++ II SY+H E + HRD+K SNIL+DK
Sbjct: 130 ILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMDK 187
Query: 218 HWNPKVSDFGLAKLLGSESSYITTRVM----GTFGYVAPEYAS--TGMLNERSDVYSFGI 271
+ K+SDFG ES Y+ + + GT+ ++ PE+ S + + D++S GI
Sbjct: 188 NGRVKLSDFG-------ESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGI 240
Query: 272 LIMEVISGRIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLD 312
+ + +P +++L+E + T +N E LD
Sbjct: 241 CLYVMFYNVVPFSL-----KISLVELFNNIRT-KNIEYPLD 275
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 93/185 (50%), Gaps = 22/185 (11%)
Query: 105 KVAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+VAVK L + A+R ++ E+ + ++H+N++ LL R L E N+
Sbjct: 55 RVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDVY 109
Query: 162 LEQWLHG----DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
L L G ++ C LT + +I +GL Y+H ++HRD+K SN+ +++
Sbjct: 110 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNE 166
Query: 218 HWNPKVSDFGLAKLLGSE-SSYITTRVMGTFGYVAPEYASTGM-LNERSDVYSFGILIME 275
K+ DFGLA+ E + Y+ TR Y APE M N+ D++S G ++ E
Sbjct: 167 DCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAE 221
Query: 276 VISGR 280
+++GR
Sbjct: 222 LLTGR 226
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 93/185 (50%), Gaps = 22/185 (11%)
Query: 105 KVAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+VAVK L + A+R ++ E+ + ++H+N++ LL R L E N+
Sbjct: 49 RVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDVY 103
Query: 162 LEQWLHG----DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
L L G ++ C LT + +I +GL Y+H ++HRD+K SN+ +++
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNE 160
Query: 218 HWNPKVSDFGLAKLLGSE-SSYITTRVMGTFGYVAPEYASTGM-LNERSDVYSFGILIME 275
K+ DFGLA+ E + Y+ TR Y APE M N+ D++S G ++ E
Sbjct: 161 DCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAE 215
Query: 276 VISGR 280
+++GR
Sbjct: 216 LLTGR 220
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 93/185 (50%), Gaps = 22/185 (11%)
Query: 105 KVAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+VAVK L + A+R ++ E+ + ++H+N++ LL R L E N+
Sbjct: 49 RVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDVY 103
Query: 162 LEQWLHG----DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
L L G ++ C LT + +I +GL Y+H ++HRD+K SN+ +++
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNE 160
Query: 218 HWNPKVSDFGLAKLLGSE-SSYITTRVMGTFGYVAPEYASTGM-LNERSDVYSFGILIME 275
K+ DFGLA+ E + Y+ TR Y APE M N+ D++S G ++ E
Sbjct: 161 DCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAE 215
Query: 276 VISGR 280
+++GR
Sbjct: 216 LLTGR 220
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 93/185 (50%), Gaps = 22/185 (11%)
Query: 105 KVAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+VAVK L + A+R ++ E+ + ++H+N++ LL R L E N+
Sbjct: 51 RVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDVY 105
Query: 162 LEQWLHG----DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
L L G ++ C LT + +I +GL Y+H ++HRD+K SN+ +++
Sbjct: 106 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNE 162
Query: 218 HWNPKVSDFGLAKLLGSE-SSYITTRVMGTFGYVAPEYASTGM-LNERSDVYSFGILIME 275
K+ DFGLA+ E + Y+ TR Y APE M N+ D++S G ++ E
Sbjct: 163 DCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAE 217
Query: 276 VISGR 280
+++GR
Sbjct: 218 LLTGR 222
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 93/185 (50%), Gaps = 22/185 (11%)
Query: 105 KVAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+VAVK L + A+R ++ E+ + ++H+N++ LL R L E N+
Sbjct: 46 RVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDVY 100
Query: 162 LEQWLHG----DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
L L G ++ C LT + +I +GL Y+H ++HRD+K SN+ +++
Sbjct: 101 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNE 157
Query: 218 HWNPKVSDFGLAKLLGSE-SSYITTRVMGTFGYVAPEYASTGM-LNERSDVYSFGILIME 275
K+ DFGLA+ E + Y+ TR Y APE M N+ D++S G ++ E
Sbjct: 158 DCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAE 212
Query: 276 VISGR 280
+++GR
Sbjct: 213 LLTGR 217
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 93/185 (50%), Gaps = 22/185 (11%)
Query: 105 KVAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+VAVK L + A+R ++ E+ + ++H+N++ LL R L E N+
Sbjct: 46 RVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDVY 100
Query: 162 LEQWLHG----DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
L L G ++ C LT + +I +GL Y+H ++HRD+K SN+ +++
Sbjct: 101 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNE 157
Query: 218 HWNPKVSDFGLAKLLGSE-SSYITTRVMGTFGYVAPEYASTGM-LNERSDVYSFGILIME 275
K+ DFGLA+ E + Y+ TR Y APE M N+ D++S G ++ E
Sbjct: 158 DCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAE 212
Query: 276 VISGR 280
+++GR
Sbjct: 213 LLTGR 217
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 93/185 (50%), Gaps = 22/185 (11%)
Query: 105 KVAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+VAVK L + A+R ++ E+ + ++H+N++ LL R L E N+
Sbjct: 54 RVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDVY 108
Query: 162 LEQWLHG----DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
L L G ++ C LT + +I +GL Y+H ++HRD+K SN+ +++
Sbjct: 109 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNE 165
Query: 218 HWNPKVSDFGLAKLLGSE-SSYITTRVMGTFGYVAPEYASTGM-LNERSDVYSFGILIME 275
K+ DFGLA+ E + Y+ TR Y APE M N+ D++S G ++ E
Sbjct: 166 DXELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAE 220
Query: 276 VISGR 280
+++GR
Sbjct: 221 LLTGR 225
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 93/185 (50%), Gaps = 22/185 (11%)
Query: 105 KVAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+VAVK L + A+R ++ E+ + ++H+N++ LL R L E N+
Sbjct: 61 RVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDVY 115
Query: 162 LEQWLHG----DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
L L G ++ C LT + +I +GL Y+H ++HRD+K SN+ +++
Sbjct: 116 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNE 172
Query: 218 HWNPKVSDFGLAKLLGSE-SSYITTRVMGTFGYVAPEYASTGM-LNERSDVYSFGILIME 275
K+ DFGLA+ E + Y+ TR Y APE M N+ D++S G ++ E
Sbjct: 173 DCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAE 227
Query: 276 VISGR 280
+++GR
Sbjct: 228 LLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 93/185 (50%), Gaps = 22/185 (11%)
Query: 105 KVAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+VAVK L + A+R ++ E+ + ++H+N++ LL R L E N+
Sbjct: 61 RVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDVY 115
Query: 162 LEQWLHG----DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
L L G ++ C LT + +I +GL Y+H ++HRD+K SN+ +++
Sbjct: 116 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNE 172
Query: 218 HWNPKVSDFGLAKLLGSE-SSYITTRVMGTFGYVAPEYASTGM-LNERSDVYSFGILIME 275
K+ DFGLA+ E + Y+ TR Y APE M N+ D++S G ++ E
Sbjct: 173 DCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAE 227
Query: 276 VISGR 280
+++GR
Sbjct: 228 LLTGR 232
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 93/185 (50%), Gaps = 22/185 (11%)
Query: 105 KVAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+VAVK L + A+R ++ E+ + ++H+N++ LL R L E N+
Sbjct: 54 RVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDVY 108
Query: 162 LEQWLHG----DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
L L G ++ C LT + +I +GL Y+H ++HRD+K SN+ +++
Sbjct: 109 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNE 165
Query: 218 HWNPKVSDFGLAKLLGSE-SSYITTRVMGTFGYVAPEYASTGM-LNERSDVYSFGILIME 275
K+ DFGLA+ E + Y+ TR Y APE M N+ D++S G ++ E
Sbjct: 166 DXELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAE 220
Query: 276 VISGR 280
+++GR
Sbjct: 221 LLTGR 225
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 93/185 (50%), Gaps = 22/185 (11%)
Query: 105 KVAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+VAVK L + A+R ++ E+ + ++H+N++ LL R L E N+
Sbjct: 51 RVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDVY 105
Query: 162 LEQWLHG----DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
L L G ++ C LT + +I +GL Y+H ++HRD+K SN+ +++
Sbjct: 106 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNE 162
Query: 218 HWNPKVSDFGLAKLLGSE-SSYITTRVMGTFGYVAPEYASTGM-LNERSDVYSFGILIME 275
K+ DFGLA+ E + Y+ TR Y APE M N+ D++S G ++ E
Sbjct: 163 DCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAE 217
Query: 276 VISGR 280
+++GR
Sbjct: 218 LLTGR 222
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 93/185 (50%), Gaps = 22/185 (11%)
Query: 105 KVAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+VAVK L + A+R ++ E+ + ++H+N++ LL R L E N+
Sbjct: 45 RVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDVY 99
Query: 162 LEQWLHG----DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
L L G ++ C LT + +I +GL Y+H ++HRD+K SN+ +++
Sbjct: 100 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNE 156
Query: 218 HWNPKVSDFGLAKLLGSE-SSYITTRVMGTFGYVAPEYASTGM-LNERSDVYSFGILIME 275
K+ DFGLA+ E + Y+ TR Y APE M N+ D++S G ++ E
Sbjct: 157 DCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAE 211
Query: 276 VISGR 280
+++GR
Sbjct: 212 LLTGR 216
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 72/156 (46%), Gaps = 20/156 (12%)
Query: 134 HKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHG----DVGPCSPLTWEIRMNIILGTA 189
H L + + V EY+N G+L + D+ + EI +
Sbjct: 78 HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIIL------- 130
Query: 190 KGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAK--LLGSESSYITTRVMGTF 247
GL +LH +V+RD+K NIL+DK + K++DFG+ K +LG T GT
Sbjct: 131 -GLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK---TNEFCGTP 183
Query: 248 GYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPV 283
Y+APE N D +SFG+L+ E++ G+ P
Sbjct: 184 DYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 219
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 85/179 (47%), Gaps = 11/179 (6%)
Query: 105 KVAVKNLLNNRGQAEREFKV-EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLE 163
+VAVK +++ R Q RE EV + +H N+V + G ++ E++ G L
Sbjct: 72 QVAVK-MMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALT 130
Query: 164 QWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKV 223
D+ L E + + L+YLH V+HRDIKS +IL+ K+
Sbjct: 131 -----DIVSQVRLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSILLTLDGRVKL 182
Query: 224 SDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIP 282
SDFG + + ++GT ++APE S + D++S GI+++E++ G P
Sbjct: 183 SDFGFCAQISKDVPK-RKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPP 240
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 93/185 (50%), Gaps = 22/185 (11%)
Query: 105 KVAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+VAVK L + A+R ++ E+ + ++H+N++ LL R L E N+
Sbjct: 68 RVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDVY 122
Query: 162 LEQWLHG----DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
L L G ++ C LT + +I +GL Y+H ++HRD+K SN+ +++
Sbjct: 123 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNE 179
Query: 218 HWNPKVSDFGLAKLLGSE-SSYITTRVMGTFGYVAPEYASTGM-LNERSDVYSFGILIME 275
K+ DFGLA+ E + Y+ TR Y APE M N+ D++S G ++ E
Sbjct: 180 DCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAE 234
Query: 276 VISGR 280
+++GR
Sbjct: 235 LLTGR 239
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 93/185 (50%), Gaps = 22/185 (11%)
Query: 105 KVAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+VAVK L + A+R ++ E+ + ++H+N++ LL R L E N+
Sbjct: 69 RVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDVY 123
Query: 162 LEQWLHG----DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
L L G ++ C LT + +I +GL Y+H ++HRD+K SN+ +++
Sbjct: 124 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNE 180
Query: 218 HWNPKVSDFGLAKLLGSE-SSYITTRVMGTFGYVAPEYASTGM-LNERSDVYSFGILIME 275
K+ DFGLA+ E + Y+ TR Y APE M N+ D++S G ++ E
Sbjct: 181 DCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAE 235
Query: 276 VISGR 280
+++GR
Sbjct: 236 LLTGR 240
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 91/184 (49%), Gaps = 13/184 (7%)
Query: 104 SKVAVKNLLNNRGQAER-EFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
++VA+K + ER EF E + ++VRLLG ++G +++ E + G+L
Sbjct: 43 TRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDL 102
Query: 163 EQWLHG-----DVGPC-SPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILID 216
+ +L + P +P + + + A G++YL+ K VHRD+ + N +
Sbjct: 103 KSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVA 159
Query: 217 KHWNPKVSDFGLAKLLGSESSYITTRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIM 274
+ + K+ DFG+ + + E+ Y G +++PE G+ SDV+SFG+++
Sbjct: 160 EDFTVKIGDFGMTRDI-YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLW 218
Query: 275 EVIS 278
E+ +
Sbjct: 219 EIAT 222
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 93/185 (50%), Gaps = 22/185 (11%)
Query: 105 KVAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+VAVK L + A+R ++ E+ + ++H+N++ LL R L E N+
Sbjct: 61 RVAVKKLSKPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDVY 115
Query: 162 LEQWLHG----DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
L L G ++ C LT + +I +GL Y+H ++HRD+K SN+ +++
Sbjct: 116 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNE 172
Query: 218 HWNPKVSDFGLAKLLGSE-SSYITTRVMGTFGYVAPEYASTGM-LNERSDVYSFGILIME 275
K+ DFGLA+ E + Y+ TR Y APE M N+ D++S G ++ E
Sbjct: 173 DCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAE 227
Query: 276 VISGR 280
+++GR
Sbjct: 228 LLTGR 232
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 93/185 (50%), Gaps = 22/185 (11%)
Query: 105 KVAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+VAVK L + A+R ++ E+ + ++H+N++ LL R L E N+
Sbjct: 45 RVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDVY 99
Query: 162 LEQWLHG----DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
L L G ++ C LT + +I +GL Y+H ++HRD+K SN+ +++
Sbjct: 100 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNE 156
Query: 218 HWNPKVSDFGLAKLLGSE-SSYITTRVMGTFGYVAPEYASTGM-LNERSDVYSFGILIME 275
K+ DFGLA+ E + Y+ TR Y APE M N+ D++S G ++ E
Sbjct: 157 DCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAE 211
Query: 276 VISGR 280
+++GR
Sbjct: 212 LLTGR 216
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 93/185 (50%), Gaps = 22/185 (11%)
Query: 105 KVAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+VAVK L + A+R ++ E+ + ++H+N++ LL R L E N+
Sbjct: 69 RVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDVY 123
Query: 162 LEQWLHG----DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
L L G ++ C LT + +I +GL Y+H ++HRD+K SN+ +++
Sbjct: 124 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNE 180
Query: 218 HWNPKVSDFGLAKLLGSE-SSYITTRVMGTFGYVAPEYASTGM-LNERSDVYSFGILIME 275
K+ DFGLA+ E + Y+ TR Y APE M N+ D++S G ++ E
Sbjct: 181 DCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAE 235
Query: 276 VISGR 280
+++GR
Sbjct: 236 LLTGR 240
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 93/185 (50%), Gaps = 22/185 (11%)
Query: 105 KVAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+VAVK L + A+R ++ E+ + ++H+N++ LL R L E N+
Sbjct: 68 RVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDVY 122
Query: 162 LEQWLHG----DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
L L G ++ C LT + +I +GL Y+H ++HRD+K SN+ +++
Sbjct: 123 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNE 179
Query: 218 HWNPKVSDFGLAKLLGSE-SSYITTRVMGTFGYVAPEYASTGM-LNERSDVYSFGILIME 275
K+ DFGLA+ E + Y+ TR Y APE M N+ D++S G ++ E
Sbjct: 180 DCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAE 234
Query: 276 VISGR 280
+++GR
Sbjct: 235 LLTGR 239
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 92/183 (50%), Gaps = 11/183 (6%)
Query: 104 SKVAVKNLLNNRGQAER-EFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
++VA+K + ER EF E + ++VRLLG ++G +++ E + G+L
Sbjct: 50 TRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDL 109
Query: 163 EQWLHG-----DVGPC-SPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILID 216
+ +L + P +P + + + A G++YL+ K VHRD+ + N ++
Sbjct: 110 KSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVA 166
Query: 217 KHWNPKVSDFGLAK-LLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIME 275
+ + K+ DFG+ + + ++ + + +++PE G+ SDV+SFG+++ E
Sbjct: 167 EDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWE 226
Query: 276 VIS 278
+ +
Sbjct: 227 IAT 229
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 93/185 (50%), Gaps = 22/185 (11%)
Query: 105 KVAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+VAVK L + A+R ++ E+ + ++H+N++ LL R L E N+
Sbjct: 60 RVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDVY 114
Query: 162 LEQWLHG----DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
L L G ++ C LT + +I +GL Y+H ++HRD+K SN+ +++
Sbjct: 115 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNE 171
Query: 218 HWNPKVSDFGLAKLLGSE-SSYITTRVMGTFGYVAPEYASTGM-LNERSDVYSFGILIME 275
K+ DFGLA+ E + Y+ TR Y APE M N+ D++S G ++ E
Sbjct: 172 DCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAE 226
Query: 276 VISGR 280
+++GR
Sbjct: 227 LLTGR 231
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 93/185 (50%), Gaps = 22/185 (11%)
Query: 105 KVAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+VAVK L + A+R ++ E+ + ++H+N++ LL R L E N+
Sbjct: 72 RVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDVY 126
Query: 162 LEQWLHG----DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
L L G ++ C LT + +I +GL Y+H ++HRD+K SN+ +++
Sbjct: 127 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNE 183
Query: 218 HWNPKVSDFGLAKLLGSE-SSYITTRVMGTFGYVAPEYASTGM-LNERSDVYSFGILIME 275
K+ DFGLA+ E + Y+ TR Y APE M N+ D++S G ++ E
Sbjct: 184 DCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAE 238
Query: 276 VISGR 280
+++GR
Sbjct: 239 LLTGR 243
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 93/185 (50%), Gaps = 22/185 (11%)
Query: 105 KVAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+VAVK L + A+R ++ E+ + ++H+N++ LL R L E N+
Sbjct: 47 RVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDVY 101
Query: 162 LEQWLHG----DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
L L G ++ C LT + +I +GL Y+H ++HRD+K SN+ +++
Sbjct: 102 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNE 158
Query: 218 HWNPKVSDFGLAKLLGSE-SSYITTRVMGTFGYVAPEYASTGM-LNERSDVYSFGILIME 275
K+ DFGLA+ E + Y+ TR Y APE M N+ D++S G ++ E
Sbjct: 159 DCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAE 213
Query: 276 VISGR 280
+++GR
Sbjct: 214 LLTGR 218
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 84/172 (48%), Gaps = 11/172 (6%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E+ + + + + G + ++ EY+ G+ L + GP E ++
Sbjct: 70 EITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL--EPGPLD----ETQIAT 123
Query: 185 IL-GTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRV 243
IL KGL YLH K +HRDIK++N+L+ +H K++DFG+A L +++
Sbjct: 124 ILREILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQL-TDTQIKRNXF 179
Query: 244 MGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVDYSRPPEEVNLI 295
+GT ++APE + ++D++S GI +E+ G P P + + LI
Sbjct: 180 VGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLI 231
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 72/156 (46%), Gaps = 20/156 (12%)
Query: 134 HKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHG----DVGPCSPLTWEIRMNIILGTA 189
H L + + V EY+N G+L + D+ + EI +
Sbjct: 77 HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIIL------- 129
Query: 190 KGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAK--LLGSESSYITTRVMGTF 247
GL +LH +V+RD+K NIL+DK + K++DFG+ K +LG T GT
Sbjct: 130 -GLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK---TNXFCGTP 182
Query: 248 GYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPV 283
Y+APE N D +SFG+L+ E++ G+ P
Sbjct: 183 DYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 218
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 93/185 (50%), Gaps = 22/185 (11%)
Query: 105 KVAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+VAVK L + A+R ++ E+ + ++H+N++ LL R L E N+
Sbjct: 60 RVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDVY 114
Query: 162 LEQWLHG----DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
L L G ++ C LT + +I +GL Y+H ++HRD+K SN+ +++
Sbjct: 115 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNE 171
Query: 218 HWNPKVSDFGLAKLLGSE-SSYITTRVMGTFGYVAPEYASTGM-LNERSDVYSFGILIME 275
K+ DFGLA+ E + Y+ TR Y APE M N+ D++S G ++ E
Sbjct: 172 DXELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAE 226
Query: 276 VISGR 280
+++GR
Sbjct: 227 LLTGR 231
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 81/180 (45%), Gaps = 11/180 (6%)
Query: 105 KVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
KV K+ + G E + + E+E + H N++RL Y + L+ EY G L +
Sbjct: 54 KVLFKSQIEKEG-VEHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYK 112
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
L C+ + I+ A L Y H KV+HRDIK N+L+ K++
Sbjct: 113 ELQKS---CT-FDEQRTATIMEELADALMYCHGK---KVIHRDIKPENLLLGLKGELKIA 165
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVD 284
DFG + S + GT Y+ PE M NE+ D++ G+L E++ G P +
Sbjct: 166 DFGWSV---HAPSLRRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFE 222
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 93/185 (50%), Gaps = 22/185 (11%)
Query: 105 KVAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+VAVK L + A+R ++ E+ + ++H+N++ LL R L E N+
Sbjct: 55 RVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDVY 109
Query: 162 LEQWLHG----DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
L L G ++ C LT + +I +GL Y+H ++HRD+K SN+ +++
Sbjct: 110 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNE 166
Query: 218 HWNPKVSDFGLAKLLGSE-SSYITTRVMGTFGYVAPEYASTGM-LNERSDVYSFGILIME 275
K+ DFGLA+ E + Y+ TR Y APE M N+ D++S G ++ E
Sbjct: 167 DSELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAE 221
Query: 276 VISGR 280
+++GR
Sbjct: 222 LLTGR 226
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 93/185 (50%), Gaps = 22/185 (11%)
Query: 105 KVAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+VAVK L + A+R ++ E+ + ++H+N++ LL R L E N+
Sbjct: 51 RVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDVY 105
Query: 162 LEQWLHG----DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
L L G ++ C LT + +I +GL Y+H ++HRD+K SN+ +++
Sbjct: 106 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNE 162
Query: 218 HWNPKVSDFGLAKLLGSE-SSYITTRVMGTFGYVAPEYASTGM-LNERSDVYSFGILIME 275
K+ DFGLA+ E + Y+ TR Y APE M N+ D++S G ++ E
Sbjct: 163 DSELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAE 217
Query: 276 VISGR 280
+++GR
Sbjct: 218 LLTGR 222
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 90/185 (48%), Gaps = 22/185 (11%)
Query: 105 KVAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
K+AVK L + A+R ++ E+ + ++H+N++ LL E N+
Sbjct: 78 KIAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPATS----LEEFNDVY 132
Query: 162 LEQWLHG----DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
L L G ++ C LT + +I +GL Y+H ++HRD+K SN+ +++
Sbjct: 133 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNE 189
Query: 218 HWNPKVSDFGLAKLLGSE-SSYITTRVMGTFGYVAPEYASTGM-LNERSDVYSFGILIME 275
K+ DFGLA+ E + Y+ TR Y APE M N D++S G ++ E
Sbjct: 190 DCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNMTVDIWSVGCIMAE 244
Query: 276 VISGR 280
+++GR
Sbjct: 245 LLTGR 249
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 81/163 (49%), Gaps = 15/163 (9%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWL---HGDVGPCSPLTWEIR 181
E+ + ++HKN+VRL LV+E+ + +L+++ +GD+ P EI
Sbjct: 51 EICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDP------EIV 103
Query: 182 MNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITT 241
+ + KGL + H V+HRD+K N+LI+++ K++DFGLA+ G +
Sbjct: 104 KSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSA 160
Query: 242 RVMGTFGYVAPEYASTGMLNERS-DVYSFGILIMEVISGRIPV 283
V+ T Y P+ L S D++S G + E+ + P+
Sbjct: 161 EVV-TLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPL 202
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 84/172 (48%), Gaps = 11/172 (6%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E+ + + + + G + ++ EY+ G+ L + GP E ++
Sbjct: 55 EITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL--EPGPLD----ETQIAT 108
Query: 185 IL-GTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRV 243
IL KGL YLH K +HRDIK++N+L+ +H K++DFG+A L +++
Sbjct: 109 ILREILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQL-TDTQIKRNXF 164
Query: 244 MGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVDYSRPPEEVNLI 295
+GT ++APE + ++D++S GI +E+ G P P + + LI
Sbjct: 165 VGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLI 216
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 84/172 (48%), Gaps = 11/172 (6%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E+ + + + + G + ++ EY+ G+ L + GP E ++
Sbjct: 55 EITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL--EPGPLD----ETQIAT 108
Query: 185 IL-GTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRV 243
IL KGL YLH K +HRDIK++N+L+ +H K++DFG+A L +++
Sbjct: 109 ILREILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQL-TDTQIKRNTF 164
Query: 244 MGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVDYSRPPEEVNLI 295
+GT ++APE + ++D++S GI +E+ G P P + + LI
Sbjct: 165 VGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLI 216
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 88/179 (49%), Gaps = 11/179 (6%)
Query: 121 EFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEI 180
E E + ++ + +VR++G C E MLV E G L ++L + + +
Sbjct: 58 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQN----RHVKDKN 112
Query: 181 RMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYIT 240
+ ++ + G+ YL E VHRD+ + N+L+ K+SDFGL+K L ++ +
Sbjct: 113 IIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYK 169
Query: 241 TRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRIPVDYSRPPEEVNLIE 296
+ G + + APE + + +SDV+SFG+L+ E S G+ P + E ++E
Sbjct: 170 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 228
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 22/185 (11%)
Query: 105 KVAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+VAVK L + A+R ++ E+ + ++H+N++ LL R L E N+
Sbjct: 72 RVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDVY 126
Query: 162 LEQWLHG----DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
L L G ++ C LT + +I +GL Y+H ++HRD+K SN+ +++
Sbjct: 127 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNE 183
Query: 218 HWNPKVSDFGLAKLLGSE-SSYITTRVMGTFGYVAPEYASTGM-LNERSDVYSFGILIME 275
K+ DFGLA+ E Y+ TR Y APE M N+ D++S G ++ E
Sbjct: 184 DCELKILDFGLARHTDDEMXGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAE 238
Query: 276 VISGR 280
+++GR
Sbjct: 239 LLTGR 243
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 93/185 (50%), Gaps = 22/185 (11%)
Query: 105 KVAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+VAVK L + A+R ++ E+ + ++H+N++ LL R L E N+
Sbjct: 49 RVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDVY 103
Query: 162 LEQWLHG----DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
L L G ++ C LT + +I +GL Y+H ++HRD+K SN+ +++
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNE 160
Query: 218 HWNPKVSDFGLAKLLGSE-SSYITTRVMGTFGYVAPEYASTGM-LNERSDVYSFGILIME 275
K+ DFGLA+ E + ++ TR Y APE M N+ D++S G ++ E
Sbjct: 161 DCELKILDFGLARHTDDEMAGFVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAE 215
Query: 276 VISGR 280
+++GR
Sbjct: 216 LLTGR 220
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 110/247 (44%), Gaps = 24/247 (9%)
Query: 108 VKNLLNNRGQAERE-FKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWL 166
+K + +R Q E + E+E + + H N++++ + + +V E G L + +
Sbjct: 52 IKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERI 111
Query: 167 HGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK---HWNPKV 223
L+ ++ L+Y H VVH+D+K NIL H K+
Sbjct: 112 VSAQARGKALSEGYVAELMKQMMNALAYFHS---QHVVHKDLKPENILFQDTSPHSPIKI 168
Query: 224 SDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPV 283
DFGLA+L S+ +T GT Y+APE + + D++S G+++ +++G +P
Sbjct: 169 IDFGLAELFKSDEH--STNAAGTALYMAPEVFKRD-VTFKCDIWSAGVVMYFLLTGCLPF 225
Query: 284 DYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNAQKRP 343
+ +E +++ T + P ++ + LLK++L DP ++RP
Sbjct: 226 TGTS-------LEEVQQKATYKEPNYAVECRPLTPQAVDLLKQML-----TKDP--ERRP 271
Query: 344 KMGHVVH 350
V+H
Sbjct: 272 SAAQVLH 278
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 93/185 (50%), Gaps = 22/185 (11%)
Query: 105 KVAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+VAVK L + A+R ++ E+ + ++H+N++ LL R L E N+
Sbjct: 49 RVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDVY 103
Query: 162 LEQWLHG----DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
L L G ++ C LT + +I +GL Y+H ++HRD+K SN+ +++
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNE 160
Query: 218 HWNPKVSDFGLAKLLGSE-SSYITTRVMGTFGYVAPEYASTGM-LNERSDVYSFGILIME 275
K+ DFGLA+ E + ++ TR Y APE M N+ D++S G ++ E
Sbjct: 161 DCELKILDFGLARHTDDEMAGFVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAE 215
Query: 276 VISGR 280
+++GR
Sbjct: 216 LLTGR 220
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 84/172 (48%), Gaps = 11/172 (6%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E+ + + + + G + ++ EY+ G+ L + GP E ++
Sbjct: 75 EITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL--EPGPLD----ETQIAT 128
Query: 185 IL-GTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRV 243
IL KGL YLH K +HRDIK++N+L+ +H K++DFG+A L +++
Sbjct: 129 ILREILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQL-TDTQIKRNTF 184
Query: 244 MGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVDYSRPPEEVNLI 295
+GT ++APE + ++D++S GI +E+ G P P + + LI
Sbjct: 185 VGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLI 236
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 76/158 (48%), Gaps = 9/158 (5%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E+ + + + R G + ++ EY+ G+ D+ PL I
Sbjct: 67 EITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSAL-----DLLKPGPLEETYIATI 121
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVM 244
+ KGL YLH + +HRDIK++N+L+ + + K++DFG+A L +++ +
Sbjct: 122 LREILKGLDYLHS---ERKIHRDIKAANVLLSEQGDVKLADFGVAGQL-TDTQIKRNXFV 177
Query: 245 GTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIP 282
GT ++APE + ++D++S GI +E+ G P
Sbjct: 178 GTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPP 215
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 97/207 (46%), Gaps = 30/207 (14%)
Query: 105 KVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGA----HRMLVYEYVNNG 160
KVAVK +A + E+ +RH+N++ + +G L+ +Y NG
Sbjct: 62 KVAVKVFFTTE-EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENG 120
Query: 161 NLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGL-----EPKVVHRDIKSSNILI 215
+L +L + L + + + + GL +LH + +P + HRD+KS NIL+
Sbjct: 121 SLYDYLKS-----TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILV 175
Query: 216 DKHWNPKVSDFGLAKLLGSESSYI----TTRVMGTFGYVAPEYASTGMLNER------SD 265
K+ ++D GLA S+++ + TRV GT Y+ PE + +D
Sbjct: 176 KKNGTCCIADLGLAVKFISDTNEVDIPPNTRV-GTKRYMPPEVLDESLNRNHFQSYIMAD 234
Query: 266 VYSFGILIMEV----ISGRIPVDYSRP 288
+YSFG+++ EV +SG I +Y P
Sbjct: 235 MYSFGLILWEVARRCVSGGIVEEYQLP 261
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 72/149 (48%), Gaps = 13/149 (8%)
Query: 134 HKNLVRLLGYCAEG-----AHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGT 188
H N+VRL+ CA LV+E+V+ +L +L D P L E +++
Sbjct: 73 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYL--DKAPPPGLPAETIKDLMRQF 129
Query: 189 AKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFG 248
+GL +LH +VHRD+K NIL+ K++DFGLA++ + + T V+ T
Sbjct: 130 LRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMAL--TPVVVTLW 184
Query: 249 YVAPEYASTGMLNERSDVYSFGILIMEVI 277
Y APE D++S G + E+
Sbjct: 185 YRAPEVLLQSTYATPVDMWSVGCIFAEMF 213
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 93/185 (50%), Gaps = 22/185 (11%)
Query: 105 KVAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+VAVK L + A+R ++ E+ + ++H+N++ LL R L E N+
Sbjct: 49 RVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDVY 103
Query: 162 LEQWLHG----DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
L L G ++ C LT + +I +GL Y+H ++HRD+K SN+ +++
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNE 160
Query: 218 HWNPKVSDFGLAKLLGSE-SSYITTRVMGTFGYVAPEYASTGM-LNERSDVYSFGILIME 275
K+ D+GLA+ E + Y+ TR Y APE M N+ D++S G ++ E
Sbjct: 161 DCELKILDYGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAE 215
Query: 276 VISGR 280
+++GR
Sbjct: 216 LLTGR 220
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 93/185 (50%), Gaps = 22/185 (11%)
Query: 105 KVAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+VAVK L + A+R ++ E+ + ++H+N++ LL R L E N+
Sbjct: 45 RVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDVY 99
Query: 162 LEQWLHG----DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
L L G ++ C LT + +I +GL Y+H ++HRD+K SN+ +++
Sbjct: 100 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNE 156
Query: 218 HWNPKVSDFGLAKLLGSE-SSYITTRVMGTFGYVAPEYASTGM-LNERSDVYSFGILIME 275
K+ DFGLA+ E + ++ TR Y APE M N+ D++S G ++ E
Sbjct: 157 DCELKILDFGLARHTDDEMAGFVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAE 211
Query: 276 VISGR 280
+++GR
Sbjct: 212 LLTGR 216
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 79/161 (49%), Gaps = 10/161 (6%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLV-YEYVNNGNLEQWLHGDVGPCSPLTWEIRMN 183
E + + R+ H V+L +C + ++ Y NG L +++ +G
Sbjct: 87 ERDVMSRLDHPFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTA 144
Query: 184 IILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYI-TTR 242
I+ L YLH ++HRD+K NIL+++ + +++DFG AK+L ES
Sbjct: 145 EIVS---ALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 198
Query: 243 VMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPV 283
+GT YV+PE + + SD+++ G +I ++++G P
Sbjct: 199 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 239
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 17/164 (10%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL-EQWLHG-DVGPCSPLTWEIRM 182
E+ + + H N+++L + + LV E+ G L EQ ++ C
Sbjct: 96 EISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDA------A 149
Query: 183 NIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKH---WNPKVSDFGLAKLLGSESSYI 239
NI+ G+ YLH+ +VHRDIK NIL++ N K+ DFGL+ + Y
Sbjct: 150 NIMKQILSGICYLHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKD--YK 204
Query: 240 TTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPV 283
+GT Y+APE NE+ DV+S G+++ ++ G P
Sbjct: 205 LRDRLGTAYYIAPEVLKKKY-NEKCDVWSCGVIMYILLCGYPPF 247
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 130/290 (44%), Gaps = 33/290 (11%)
Query: 106 VAVKNLLNNRG-QAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K L N +A +E E + V + RLLG C + LV + + G L
Sbjct: 49 VAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRLLGICLTSTVQ-LVTQLMPYGCLLD 107
Query: 165 WLH---GDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
+ G +G L W +++ AKG+SYL + ++VHRD+ + N+L+ +
Sbjct: 108 HVRENRGRLGSQDLLNWCMQI------AKGMSYLED---VRLVHRDLAARNVLVKSPNHV 158
Query: 222 KVSDFGLAKLLG-SESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-G 279
K++DFGLA+LL E+ Y ++A E +SDV+S+G+ + E+++ G
Sbjct: 159 KITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMTFG 218
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNA 339
P D E +L+E +G +LP+ P + + ++ ++C ++
Sbjct: 219 AKPYDGIPAREIPDLLE-----------KG---ERLPQPPICTI--DVYMIMVKCWMIDS 262
Query: 340 QKRPKMGHVVHMLE-AQESPSKEPSNSFQDRYRASPKNELIEKQVTESGD 388
+ RP+ +V P + +D ASP + + + E D
Sbjct: 263 ECRPRFRELVSEFSRMARDPQRFVVIQNEDLGPASPLDSTFYRSLLEDDD 312
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 91/184 (49%), Gaps = 20/184 (10%)
Query: 105 KVAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+VAVK L + A+R ++ E+ + ++H+N++ LL R L E N+
Sbjct: 49 RVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDVY 103
Query: 162 LEQWLHG----DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
L L G ++ C LT + +I +GL Y+H ++HRD+K SN+ +++
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNE 160
Query: 218 HWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGM-LNERSDVYSFGILIMEV 276
K+ DFGLA+ E T + T Y APE M N+ D++S G ++ E+
Sbjct: 161 DCELKILDFGLARHTDDE----MTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 277 ISGR 280
++GR
Sbjct: 217 LTGR 220
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 126/269 (46%), Gaps = 45/269 (16%)
Query: 105 KVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEG-------AHRMLVYEYV 157
+VAVK + ++R + + E+ +RH+N+ LG+ A LV +Y
Sbjct: 29 EVAVK-IFSSREERSWFREAEIYQTVMLRHENI---LGFIAADNKDNGTWTQLWLVSDYH 84
Query: 158 NNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGL-----EPKVVHRDIKSSN 212
+G+L +L+ +T E + + L TA GL++LH + +P + HRD+KS N
Sbjct: 85 EHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKN 139
Query: 213 ILIDKHWNPKVSDFGLAKLLGSESSYIT---TRVMGTFGYVAPEYA--STGMLN----ER 263
IL+ K+ ++D GLA S + I +GT Y+APE S M + +R
Sbjct: 140 ILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKR 199
Query: 264 SDVYSFGILIMEVIS----GRIPVDYSRP-----PEEVNLIEWLKKMVTNRNPEGVLDPK 314
+D+Y+ G++ E+ G I DY P P + + +E ++K+V E L P
Sbjct: 200 ADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPS-VEEMRKVVC----EQKLRPN 254
Query: 315 LPEKPTSRLLKRILLVALR-CVDPNAQKR 342
+P + S R++ +R C N R
Sbjct: 255 IPNRWQSCEALRVMAKIMRECWYANGAAR 283
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 66/129 (51%), Gaps = 7/129 (5%)
Query: 156 YVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILI 215
YV +E LH + PLT E + +GL Y+H +V+HRD+K SN+L+
Sbjct: 135 YVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLV 191
Query: 216 DKHWNPKVSDFGLAKLLGS---ESSYITTRVMGTFGYVAPEYA-STGMLNERSDVYSFGI 271
+++ K+ DFG+A+ L + E Y T + T Y APE S + D++S G
Sbjct: 192 NENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGC 251
Query: 272 LIMEVISGR 280
+ E+++ R
Sbjct: 252 IFGEMLARR 260
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 126/269 (46%), Gaps = 45/269 (16%)
Query: 105 KVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEG-------AHRMLVYEYV 157
+VAVK + ++R + + E+ +RH+N+ LG+ A LV +Y
Sbjct: 28 EVAVK-IFSSREERSWFREAEIYQTVMLRHENI---LGFIAADNKDNGTWTQLWLVSDYH 83
Query: 158 NNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGL-----EPKVVHRDIKSSN 212
+G+L +L+ +T E + + L TA GL++LH + +P + HRD+KS N
Sbjct: 84 EHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKN 138
Query: 213 ILIDKHWNPKVSDFGLAKLLGSESSYIT---TRVMGTFGYVAPEYA--STGMLN----ER 263
IL+ K+ ++D GLA S + I +GT Y+APE S M + +R
Sbjct: 139 ILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKR 198
Query: 264 SDVYSFGILIMEVIS----GRIPVDYSRP-----PEEVNLIEWLKKMVTNRNPEGVLDPK 314
+D+Y+ G++ E+ G I DY P P + + +E ++K+V E L P
Sbjct: 199 ADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPS-VEEMRKVVC----EQKLRPN 253
Query: 315 LPEKPTSRLLKRILLVALR-CVDPNAQKR 342
+P + S R++ +R C N R
Sbjct: 254 IPNRWQSCEALRVMAKIMRECWYANGAAR 282
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 126/269 (46%), Gaps = 45/269 (16%)
Query: 105 KVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEG-------AHRMLVYEYV 157
+VAVK + ++R + + E+ +RH+N+ LG+ A LV +Y
Sbjct: 67 EVAVK-IFSSREERSWFREAEIYQTVMLRHENI---LGFIAADNKDNGTWTQLWLVSDYH 122
Query: 158 NNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGL-----EPKVVHRDIKSSN 212
+G+L +L+ +T E + + L TA GL++LH + +P + HRD+KS N
Sbjct: 123 EHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKN 177
Query: 213 ILIDKHWNPKVSDFGLAKLLGSESSYIT---TRVMGTFGYVAPEYA--STGMLN----ER 263
IL+ K+ ++D GLA S + I +GT Y+APE S M + +R
Sbjct: 178 ILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKR 237
Query: 264 SDVYSFGILIMEVIS----GRIPVDYSRP-----PEEVNLIEWLKKMVTNRNPEGVLDPK 314
+D+Y+ G++ E+ G I DY P P + + +E ++K+V E L P
Sbjct: 238 ADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPS-VEEMRKVVC----EQKLRPN 292
Query: 315 LPEKPTSRLLKRILLVALR-CVDPNAQKR 342
+P + S R++ +R C N R
Sbjct: 293 IPNRWQSCEALRVMAKIMRECWYANGAAR 321
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 126/269 (46%), Gaps = 45/269 (16%)
Query: 105 KVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEG-------AHRMLVYEYV 157
+VAVK + ++R + + E+ +RH+N+ LG+ A LV +Y
Sbjct: 31 EVAVK-IFSSREERSWFREAEIYQTVMLRHENI---LGFIAADNKDNGTWTQLWLVSDYH 86
Query: 158 NNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGL-----EPKVVHRDIKSSN 212
+G+L +L+ +T E + + L TA GL++LH + +P + HRD+KS N
Sbjct: 87 EHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKN 141
Query: 213 ILIDKHWNPKVSDFGLAKLLGSESSYIT---TRVMGTFGYVAPEYA--STGMLN----ER 263
IL+ K+ ++D GLA S + I +GT Y+APE S M + +R
Sbjct: 142 ILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKR 201
Query: 264 SDVYSFGILIMEVIS----GRIPVDYSRP-----PEEVNLIEWLKKMVTNRNPEGVLDPK 314
+D+Y+ G++ E+ G I DY P P + + +E ++K+V E L P
Sbjct: 202 ADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPS-VEEMRKVVC----EQKLRPN 256
Query: 315 LPEKPTSRLLKRILLVALR-CVDPNAQKR 342
+P + S R++ +R C N R
Sbjct: 257 IPNRWQSCEALRVMAKIMRECWYANGAAR 285
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 66/129 (51%), Gaps = 7/129 (5%)
Query: 156 YVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILI 215
YV +E LH + PLT E + +GL Y+H +V+HRD+K SN+L+
Sbjct: 136 YVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLV 192
Query: 216 DKHWNPKVSDFGLAKLLG---SESSYITTRVMGTFGYVAPEYA-STGMLNERSDVYSFGI 271
+++ K+ DFG+A+ L +E Y T + T Y APE S + D++S G
Sbjct: 193 NENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGC 252
Query: 272 LIMEVISGR 280
+ E+++ R
Sbjct: 253 IFGEMLARR 261
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 8/160 (5%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E + + R+ H V+L + Y NG L +++ +G
Sbjct: 60 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTAE 118
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYI-TTRV 243
I+ L YLH ++HRD+K NIL+++ + +++DFG AK+L ES
Sbjct: 119 IVS---ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 172
Query: 244 MGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPV 283
+GT YV+PE + + SD+++ G +I ++++G P
Sbjct: 173 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 212
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 126/269 (46%), Gaps = 45/269 (16%)
Query: 105 KVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEG-------AHRMLVYEYV 157
+VAVK + ++R + + E+ +RH+N+ LG+ A LV +Y
Sbjct: 34 EVAVK-IFSSREERSWFREAEIYQTVMLRHENI---LGFIAADNKDNGTWTQLWLVSDYH 89
Query: 158 NNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGL-----EPKVVHRDIKSSN 212
+G+L +L+ +T E + + L TA GL++LH + +P + HRD+KS N
Sbjct: 90 EHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKN 144
Query: 213 ILIDKHWNPKVSDFGLAKLLGSESSYIT---TRVMGTFGYVAPEYA--STGMLN----ER 263
IL+ K+ ++D GLA S + I +GT Y+APE S M + +R
Sbjct: 145 ILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKR 204
Query: 264 SDVYSFGILIMEVIS----GRIPVDYSRP-----PEEVNLIEWLKKMVTNRNPEGVLDPK 314
+D+Y+ G++ E+ G I DY P P + + +E ++K+V E L P
Sbjct: 205 ADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPS-VEEMRKVVC----EQKLRPN 259
Query: 315 LPEKPTSRLLKRILLVALR-CVDPNAQKR 342
+P + S R++ +R C N R
Sbjct: 260 IPNRWQSCEALRVMAKIMRECWYANGAAR 288
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 126/269 (46%), Gaps = 45/269 (16%)
Query: 105 KVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEG-------AHRMLVYEYV 157
+VAVK + ++R + + E+ +RH+N+ LG+ A LV +Y
Sbjct: 54 EVAVK-IFSSREERSWFREAEIYQTVMLRHENI---LGFIAADNKDNGTWTQLWLVSDYH 109
Query: 158 NNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGL-----EPKVVHRDIKSSN 212
+G+L +L+ +T E + + L TA GL++LH + +P + HRD+KS N
Sbjct: 110 EHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKN 164
Query: 213 ILIDKHWNPKVSDFGLAKLLGSESSYIT---TRVMGTFGYVAPEYA--STGMLN----ER 263
IL+ K+ ++D GLA S + I +GT Y+APE S M + +R
Sbjct: 165 ILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKR 224
Query: 264 SDVYSFGILIMEVIS----GRIPVDYSRP-----PEEVNLIEWLKKMVTNRNPEGVLDPK 314
+D+Y+ G++ E+ G I DY P P + + +E ++K+V E L P
Sbjct: 225 ADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPS-VEEMRKVVC----EQKLRPN 279
Query: 315 LPEKPTSRLLKRILLVALR-CVDPNAQKR 342
+P + S R++ +R C N R
Sbjct: 280 IPNRWQSCEALRVMAKIMRECWYANGAAR 308
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 8/160 (5%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E + + R+ H V+L + Y NG L +++ +G
Sbjct: 59 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTAE 117
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYI-TTRV 243
I+ L YLH ++HRD+K NIL+++ + +++DFG AK+L ES
Sbjct: 118 IVS---ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 171
Query: 244 MGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPV 283
+GT YV+PE + + SD+++ G +I ++++G P
Sbjct: 172 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 211
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 81/181 (44%), Gaps = 16/181 (8%)
Query: 106 VAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQW 165
+A K L G E E V + +++H N+V L G H L+ + V+ G
Sbjct: 51 IAKKALEGKEGSMENEIAV----LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGE---- 102
Query: 166 LHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNIL---IDKHWNPK 222
L + T +I + YLH + +VHRD+K N+L +D+
Sbjct: 103 LFDRIVEKGFYTERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIM 159
Query: 223 VSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIP 282
+SDFGL+K+ + + + GT GYVAPE + ++ D +S G++ ++ G P
Sbjct: 160 ISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
Query: 283 V 283
Sbjct: 218 F 218
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 73/160 (45%), Gaps = 17/160 (10%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGP----CSPLTWEI 180
E+ + +++H NLV LL LV+EY ++ L + G +TW+
Sbjct: 52 EIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQ- 110
Query: 181 RMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYIT 240
T + +++ H+ +HRD+K NILI KH K+ DFG A+LL S Y
Sbjct: 111 -------TLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYD 160
Query: 241 TRVMGTFGYVAPE-YASTGMLNERSDVYSFGILIMEVISG 279
V T Y +PE DV++ G + E++SG
Sbjct: 161 DEV-ATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 8/160 (5%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E + + R+ H V+L + Y NG L +++ +G
Sbjct: 58 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTAE 116
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYI-TTRV 243
I+ L YLH ++HRD+K NIL+++ + +++DFG AK+L ES
Sbjct: 117 IVS---ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 170
Query: 244 MGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPV 283
+GT YV+PE + + SD+++ G +I ++++G P
Sbjct: 171 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 210
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 82/162 (50%), Gaps = 18/162 (11%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E+ + + H N+V+LL LV+E+++ +L++++ D + + + +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSY 108
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVM 244
+ +GLS+ H +V+HRD+K N+LI+ K++DFGLA+ G T V+
Sbjct: 109 LFQLLQGLSFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 165
Query: 245 GTFGYVAPE------YASTGMLNERSDVYSFGILIMEVISGR 280
T Y APE Y ST + D++S G + E+++ R
Sbjct: 166 -TLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVTRR 201
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 8/160 (5%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E + + R+ H V+L + Y NG L +++ +G
Sbjct: 57 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTAE 115
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYI-TTRV 243
I+ L YLH ++HRD+K NIL+++ + +++DFG AK+L ES
Sbjct: 116 IVS---ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 169
Query: 244 MGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPV 283
+GT YV+PE + + SD+++ G +I ++++G P
Sbjct: 170 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 209
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 76/160 (47%), Gaps = 8/160 (5%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E + + R+ H V+L + Y NG L +++ +G
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIR-KIGSFDETCTRFYTAE 140
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYI-TTRV 243
I+ L YLH ++HRD+K NIL+++ + +++DFG AK+L ES
Sbjct: 141 IVS---ALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSF 194
Query: 244 MGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPV 283
+GT YV+PE + ++ SD+++ G +I ++++G P
Sbjct: 195 VGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPF 234
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 71/149 (47%), Gaps = 13/149 (8%)
Query: 134 HKNLVRLLGYCAEG-----AHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGT 188
H N+VRL+ CA LV+E+V+ +L +L D P L E +++
Sbjct: 65 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYL--DKAPPPGLPAETIKDLMRQF 121
Query: 189 AKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFG 248
+GL +LH +VHRD+K NIL+ K++DFGLA++ + + V+ T
Sbjct: 122 LRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFP--VVVTLW 176
Query: 249 YVAPEYASTGMLNERSDVYSFGILIMEVI 277
Y APE D++S G + E+
Sbjct: 177 YRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 85/178 (47%), Gaps = 11/178 (6%)
Query: 120 REFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWE 179
+E E+ + + ++V+ G + +V EY G++ + LT +
Sbjct: 69 QEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLR---NKTLTED 125
Query: 180 IRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYI 239
I+ T KGL YLH + +HRDIK+ NIL++ + K++DFG+A G + +
Sbjct: 126 EIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVA---GQLTDXM 179
Query: 240 TTR--VMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVDYSRPPEEVNLI 295
R V+GT ++APE N +D++S GI +E+ G+ P P + +I
Sbjct: 180 AKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMI 237
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 90/176 (51%), Gaps = 14/176 (7%)
Query: 123 KVEVEAIGRVRHKNLVRL-LGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIR 181
K+E + + V H +V+L + EG L+ +++ G+L L +V T E
Sbjct: 78 KMERDILADVNHPFVVKLHYAFQTEGK-LYLILDFLRGGDLFTRLSKEV----MFTEEDV 132
Query: 182 MNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAK--LLGSESSYI 239
+ A GL +LH +++RD+K NIL+D+ + K++DFGL+K + + +Y
Sbjct: 133 KFYLAELALGLDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAY- 188
Query: 240 TTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVDYSRPPEEVNLI 295
GT Y+APE + + +D +S+G+L+ E+++G +P E + LI
Sbjct: 189 --SFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLI 242
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 8/160 (5%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E + + R+ H V+L + Y NG L +++ +G
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTAE 140
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYI-TTRV 243
I+ L YLH ++HRD+K NIL+++ + +++DFG AK+L ES
Sbjct: 141 IVS---ALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 244 MGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPV 283
+GT YV+PE + + SD+++ G +I ++++G P
Sbjct: 195 VGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPF 234
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 8/160 (5%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E + + R+ H V+L + Y NG L +++ +G
Sbjct: 80 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTAE 138
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYI-TTRV 243
I+ L YLH ++HRD+K NIL+++ + +++DFG AK+L ES
Sbjct: 139 IVS---ALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 192
Query: 244 MGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPV 283
+GT YV+PE + + SD+++ G +I ++++G P
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 8/160 (5%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E + + R+ H V+L + Y NG L +++ +G
Sbjct: 83 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTAE 141
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYI-TTRV 243
I+ L YLH ++HRD+K NIL+++ + +++DFG AK+L ES
Sbjct: 142 IVS---ALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSF 195
Query: 244 MGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPV 283
+GT YV+PE + + SD+++ G +I ++++G P
Sbjct: 196 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 235
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 92/185 (49%), Gaps = 22/185 (11%)
Query: 105 KVAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+VAVK L + A+R ++ E+ + ++H+N++ LL R L E N+
Sbjct: 49 RVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDVY 103
Query: 162 LEQWLHG----DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
L L G ++ C LT + +I +GL Y+H ++HRD+K SN+ +++
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNE 160
Query: 218 HWNPKVSDFGLAKLLGSE-SSYITTRVMGTFGYVAPEYASTGM-LNERSDVYSFGILIME 275
K+ DF LA+ E + Y+ TR Y APE M N+ D++S G ++ E
Sbjct: 161 DCELKILDFYLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAE 215
Query: 276 VISGR 280
+++GR
Sbjct: 216 LLTGR 220
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 8/160 (5%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E + + R+ H V+L + Y NG L +++ +G
Sbjct: 80 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTAE 138
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYI-TTRV 243
I+ L YLH ++HRD+K NIL+++ + +++DFG AK+L ES
Sbjct: 139 IVS---ALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAF 192
Query: 244 MGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPV 283
+GT YV+PE + + SD+++ G +I ++++G P
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 8/160 (5%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E + + R+ H V+L + Y NG L +++ +G
Sbjct: 80 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTAE 138
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYI-TTRV 243
I+ L YLH ++HRD+K NIL+++ + +++DFG AK+L ES
Sbjct: 139 IVS---ALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 192
Query: 244 MGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPV 283
+GT YV+PE + + SD+++ G +I ++++G P
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 8/160 (5%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E + + R+ H V+L + Y NG L +++ +G
Sbjct: 80 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTAE 138
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYI-TTRV 243
I+ L YLH ++HRD+K NIL+++ + +++DFG AK+L ES
Sbjct: 139 IVS---ALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 192
Query: 244 MGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPV 283
+GT YV+PE + + SD+++ G +I ++++G P
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 8/160 (5%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E + + R+ H V+L + Y NG L +++ +G
Sbjct: 83 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTAE 141
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYI-TTRV 243
I+ L YLH ++HRD+K NIL+++ + +++DFG AK+L ES
Sbjct: 142 IVS---ALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 195
Query: 244 MGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPV 283
+GT YV+PE + + SD+++ G +I ++++G P
Sbjct: 196 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 235
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 8/160 (5%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E + + R+ H V+L + Y NG L +++ +G
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTAE 140
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYI-TTRV 243
I+ L YLH ++HRD+K NIL+++ + +++DFG AK+L ES
Sbjct: 141 IVS---ALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 244 MGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPV 283
+GT YV+PE + + SD+++ G +I ++++G P
Sbjct: 195 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 8/160 (5%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E + + R+ H V+L + Y NG L +++ +G
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTAE 140
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYI-TTRV 243
I+ L YLH ++HRD+K NIL+++ + +++DFG AK+L ES
Sbjct: 141 IVS---ALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 244 MGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPV 283
+GT YV+PE + + SD+++ G +I ++++G P
Sbjct: 195 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 102/241 (42%), Gaps = 43/241 (17%)
Query: 53 VAAVVPEVSHLGWGHWYTLRELEVSTNGFSDDKXXXXXXXXXXXXXXXXDNSKVAVKNLL 112
V++VV H GH + ++ +EV+ +++ + L
Sbjct: 106 VSSVVRRCVHRATGHEFAVKIMEVTAE-------------------------RLSPEQLE 140
Query: 113 NNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGP 172
R RE + + G H +++ L+ + LV++ + G L +L V
Sbjct: 141 EVREATRRETHILRQVAG---HPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVAL 197
Query: 173 CSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLL 232
T I +++ + +S+LH +VHRD+K NIL+D + ++SDFG + L
Sbjct: 198 SEKETRSIMRSLL----EAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCHL 250
Query: 233 GSESSYITTRVMGTFGYVAPEYASTGM------LNERSDVYSFGILIMEVISGRIPVDYS 286
E + GT GY+APE M + D+++ G+++ +++G P +
Sbjct: 251 --EPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHR 308
Query: 287 R 287
R
Sbjct: 309 R 309
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 20/184 (10%)
Query: 106 VAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCA-----EGAHRMLVYEYV 157
VA+K L N+ A+R ++ E+ + V HKN++ LL E + + +
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 110
Query: 158 NNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
+ NL Q + + L E ++ G+ +LH ++HRD+K SNI++
Sbjct: 111 MDANLSQVIQME------LDHERMSYLLYQMLVGIKHLHSA---GIIHRDLKPSNIVVKS 161
Query: 218 HWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVI 277
K+ DFGLA+ G +S++ T + T Y APE E D++S G+++ E+I
Sbjct: 162 DATLKILDFGLARTAG--TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMI 219
Query: 278 SGRI 281
G +
Sbjct: 220 KGGV 223
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 8/160 (5%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E + + R+ H V+L + Y NG L +++ +G
Sbjct: 64 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTAE 122
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYI-TTRV 243
I+ L YLH ++HRD+K NIL+++ + +++DFG AK+L ES
Sbjct: 123 IVS---ALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 176
Query: 244 MGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPV 283
+GT YV+PE + + SD+++ G +I ++++G P
Sbjct: 177 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 216
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 8/160 (5%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E + + R+ H V+L + Y NG L +++ +G
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTAE 140
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYI-TTRV 243
I+ L YLH ++HRD+K NIL+++ + +++DFG AK+L ES
Sbjct: 141 IVS---ALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 244 MGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPV 283
+GT YV+PE + + SD+++ G +I ++++G P
Sbjct: 195 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 8/160 (5%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E + + R+ H V+L + Y NG L +++ +G
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTAE 140
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYI-TTRV 243
I+ L YLH ++HRD+K NIL+++ + +++DFG AK+L ES
Sbjct: 141 IVS---ALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 244 MGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPV 283
+GT YV+PE + + SD+++ G +I ++++G P
Sbjct: 195 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 92/185 (49%), Gaps = 22/185 (11%)
Query: 105 KVAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+VAVK L + A+R ++ E+ + ++H+N++ LL R L E N+
Sbjct: 49 RVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDVY 103
Query: 162 LEQWLHG----DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
L L G ++ C LT + +I +GL Y+H ++HRD+K SN+ +++
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNE 160
Query: 218 HWNPKVSDFGLAKLLGSE-SSYITTRVMGTFGYVAPEYASTGM-LNERSDVYSFGILIME 275
K+ FGLA+ E + Y+ TR Y APE M N+ D++S G ++ E
Sbjct: 161 DCELKILGFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAE 215
Query: 276 VISGR 280
+++GR
Sbjct: 216 LLTGR 220
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 8/160 (5%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E + + R+ H V+L + Y NG L +++ +G
Sbjct: 85 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTAE 143
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYI-TTRV 243
I+ L YLH ++HRD+K NIL+++ + +++DFG AK+L ES
Sbjct: 144 IVS---ALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 197
Query: 244 MGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPV 283
+GT YV+PE + + SD+++ G +I ++++G P
Sbjct: 198 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 237
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 71/149 (47%), Gaps = 13/149 (8%)
Query: 134 HKNLVRLLGYCAEG-----AHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGT 188
H N+VRL+ CA LV+E+V+ +L +L D P L E +++
Sbjct: 65 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYL--DKAPPPGLPAETIKDLMRQF 121
Query: 189 AKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFG 248
+GL +LH +VHRD+K NIL+ K++DFGLA++ + + V+ T
Sbjct: 122 LRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMAL--APVVVTLW 176
Query: 249 YVAPEYASTGMLNERSDVYSFGILIMEVI 277
Y APE D++S G + E+
Sbjct: 177 YRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 8/160 (5%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E + + R+ H V+L + Y NG L +++ +G
Sbjct: 79 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTAE 137
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYI-TTRV 243
I+ L YLH ++HRD+K NIL+++ + +++DFG AK+L ES
Sbjct: 138 IVS---ALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 191
Query: 244 MGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPV 283
+GT YV+PE + + SD+++ G +I ++++G P
Sbjct: 192 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 231
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 82/162 (50%), Gaps = 18/162 (11%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E+ + + H N+V+LL LV+E+++ +L++++ D + + + +
Sbjct: 56 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSY 112
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVM 244
+ +GL++ H +V+HRD+K N+LI+ K++DFGLA+ G T V+
Sbjct: 113 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 169
Query: 245 GTFGYVAPE------YASTGMLNERSDVYSFGILIMEVISGR 280
T Y APE Y ST + D++S G + E+++ R
Sbjct: 170 -TLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVTRR 205
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 83/163 (50%), Gaps = 13/163 (7%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
EV+ + ++ H N+++L + + + LV E G L ++ + I
Sbjct: 76 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDAARI 131
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILID---KHWNPKVSDFGLAKLLGSESSYITT 241
I G++Y+H+ K+VHRD+K N+L++ K N ++ DFGL+ E+S
Sbjct: 132 IRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF--EASKKMK 186
Query: 242 RVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVD 284
+GT Y+APE G +E+ DV+S G+++ ++SG P +
Sbjct: 187 DKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSGCPPFN 228
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 20/184 (10%)
Query: 106 VAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCA-----EGAHRMLVYEYV 157
VA+K L N+ A+R ++ E+ + V HKN++ LL E + + +
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 110
Query: 158 NNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
+ NL Q + + L E ++ G+ +LH ++HRD+K SNI++
Sbjct: 111 MDANLSQVIQME------LDHERMSYLLYQMLVGIKHLHSA---GIIHRDLKPSNIVVKS 161
Query: 218 HWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVI 277
K+ DFGLA+ G +S++ T + T Y APE E D++S G+++ E+I
Sbjct: 162 DATLKILDFGLARTAG--TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMI 219
Query: 278 SGRI 281
G +
Sbjct: 220 KGGV 223
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 91/186 (48%), Gaps = 24/186 (12%)
Query: 106 VAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCA------EGAHRMLVYEY 156
VAVK L N+ A+R ++ E+ + V HKN++ LL E LV E
Sbjct: 50 VAVKKLSRPFQNQTHAKRAYR-ELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 108
Query: 157 VNNGNLEQWLHGDVGPCSPLTWEIRMNIIL-GTAKGLSYLHEGLEPKVVHRDIKSSNILI 215
++ NL Q +H ++ RM+ +L G+ +LH ++HRD+K SNI++
Sbjct: 109 MD-ANLCQVIHMELD-------HERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVV 157
Query: 216 DKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIME 275
K+ DFGLA+ + ++++ T + T Y APE E D++S G ++ E
Sbjct: 158 KSDCTLKILDFGLAR--TASTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 215
Query: 276 VISGRI 281
++ G +
Sbjct: 216 LVKGSV 221
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 8/160 (5%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E + + R+ H V+L + Y NG L +++ +G
Sbjct: 79 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTAE 137
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYI-TTRV 243
I+ L YLH ++HRD+K NIL+++ + +++DFG AK+L ES
Sbjct: 138 IVS---ALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSF 191
Query: 244 MGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPV 283
+GT YV+PE + + SD+++ G +I ++++G P
Sbjct: 192 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 231
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 81/163 (49%), Gaps = 15/163 (9%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWL---HGDVGPCSPLTWEIR 181
E+ + ++HKN+VRL LV+E+ + +L+++ +GD+ P EI
Sbjct: 51 EICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDP------EIV 103
Query: 182 MNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITT 241
+ + KGL + H V+HRD+K N+LI+++ K+++FGLA+ G +
Sbjct: 104 KSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSA 160
Query: 242 RVMGTFGYVAPEYASTGMLNERS-DVYSFGILIMEVISGRIPV 283
V+ T Y P+ L S D++S G + E+ + P+
Sbjct: 161 EVV-TLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPL 202
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 82/162 (50%), Gaps = 18/162 (11%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E+ + + H N+V+LL LV+E+++ +L++++ D + + + +
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSY 107
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVM 244
+ +GL++ H +V+HRD+K N+LI+ K++DFGLA+ G T V+
Sbjct: 108 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 164
Query: 245 GTFGYVAPE------YASTGMLNERSDVYSFGILIMEVISGR 280
T Y APE Y ST + D++S G + E+++ R
Sbjct: 165 -TLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVTRR 200
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 83/163 (50%), Gaps = 13/163 (7%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
EV+ + ++ H N+++L + + + LV E G L ++ + I
Sbjct: 82 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDAARI 137
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILID---KHWNPKVSDFGLAKLLGSESSYITT 241
I G++Y+H+ K+VHRD+K N+L++ K N ++ DFGL+ E+S
Sbjct: 138 IRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF--EASKKMK 192
Query: 242 RVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVD 284
+GT Y+APE G +E+ DV+S G+++ ++SG P +
Sbjct: 193 DKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSGCPPFN 234
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 90/186 (48%), Gaps = 24/186 (12%)
Query: 106 VAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCA------EGAHRMLVYEY 156
VA+K L N+ A+R ++ E+ + V HKN++ LL E LV E
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 110
Query: 157 VNNGNLEQWLHGDVGPCSPLTWEIRMNIIL-GTAKGLSYLHEGLEPKVVHRDIKSSNILI 215
++ NL Q + ++ RM+ +L G+ +LH ++HRD+K SNI++
Sbjct: 111 MD-ANLXQVIQMELD-------HERMSYLLYQMLXGIKHLHSA---GIIHRDLKPSNIVV 159
Query: 216 DKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIME 275
K+ DFGLA+ G +S++ T + T Y APE E D++S G ++ E
Sbjct: 160 KSDXTLKILDFGLARTAG--TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
Query: 276 VISGRI 281
++ +I
Sbjct: 218 MVRHKI 223
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 92/185 (49%), Gaps = 22/185 (11%)
Query: 105 KVAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+VAVK L + A+R ++ E+ + ++H+N++ LL R L E N+
Sbjct: 49 RVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDVY 103
Query: 162 LEQWLHG----DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
L L G ++ C LT + +I +GL Y+H ++HRD+K SN+ +++
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNE 160
Query: 218 HWNPKVSDFGLAKLLGSE-SSYITTRVMGTFGYVAPEYASTGM-LNERSDVYSFGILIME 275
K+ D GLA+ E + Y+ TR Y APE M N+ D++S G ++ E
Sbjct: 161 DCELKILDAGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAE 215
Query: 276 VISGR 280
+++GR
Sbjct: 216 LLTGR 220
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 82/162 (50%), Gaps = 18/162 (11%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E+ + + H N+V+LL LV+E+++ +L++++ D + + + +
Sbjct: 59 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSY 115
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVM 244
+ +GL++ H +V+HRD+K N+LI+ K++DFGLA+ G T V+
Sbjct: 116 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 172
Query: 245 GTFGYVAPE------YASTGMLNERSDVYSFGILIMEVISGR 280
T Y APE Y ST + D++S G + E+++ R
Sbjct: 173 -TLWYRAPEILLGXKYYSTAV-----DIWSLGCIFAEMVTRR 208
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 82/165 (49%), Gaps = 15/165 (9%)
Query: 124 VEVEAIGRVRHKNLVRLLGYCAEGAHRM-LVYEYVNNGNLEQWLH--GDVGPCSPLTWEI 180
VE + + + L C + R+ V EYVN G+L + G + +
Sbjct: 68 VEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAA 127
Query: 181 RMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYIT 240
++I GL +LH+ +++RD+K N+++D + K++DFG+ K + +T
Sbjct: 128 EISI------GLFFLHKR---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDG--VT 176
Query: 241 TR-VMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVD 284
TR GT Y+APE + + D +++G+L+ E+++G+ P D
Sbjct: 177 TREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 82/162 (50%), Gaps = 18/162 (11%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E+ + + H N+V+LL LV+E+++ +L++++ D + + + +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSY 108
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVM 244
+ +GL++ H +V+HRD+K N+LI+ K++DFGLA+ G T V+
Sbjct: 109 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 165
Query: 245 GTFGYVAPE------YASTGMLNERSDVYSFGILIMEVISGR 280
T Y APE Y ST + D++S G + E+++ R
Sbjct: 166 -TLWYRAPEILLGXKYYSTAV-----DIWSLGCIFAEMVTRR 201
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 83/163 (50%), Gaps = 13/163 (7%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
EV+ + ++ H N+++L + + + LV E G L ++ + I
Sbjct: 99 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDAARI 154
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILID---KHWNPKVSDFGLAKLLGSESSYITT 241
I G++Y+H+ K+VHRD+K N+L++ K N ++ DFGL+ E+S
Sbjct: 155 IRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF--EASKKMK 209
Query: 242 RVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVD 284
+GT Y+APE G +E+ DV+S G+++ ++SG P +
Sbjct: 210 DKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSGCPPFN 251
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 97/203 (47%), Gaps = 29/203 (14%)
Query: 123 KVEVEAIGRVRHKNLVRL-LGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIR 181
K+E + + V H +V+L + EG L+ +++ G+L L +V T E
Sbjct: 74 KMERDILVEVNHPFIVKLHYAFQTEGK-LYLILDFLRGGDLFTRLSKEVM----FTEEDV 128
Query: 182 MNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAK--LLGSESSYI 239
+ A L +LH +++RD+K NIL+D+ + K++DFGL+K + + +Y
Sbjct: 129 KFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAY- 184
Query: 240 TTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVDYSRPPEEVNLI---- 295
GT Y+APE + + +D +SFG+L+ E+++G +P E + +I
Sbjct: 185 --SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAK 242
Query: 296 -----------EWLKKMVTNRNP 307
+ L +M+ RNP
Sbjct: 243 LGMPQFLSPEAQSLLRMLFKRNP 265
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 82/162 (50%), Gaps = 18/162 (11%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E+ + + H N+V+LL LV+E+++ +L++++ D + + + +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSY 108
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVM 244
+ +GL++ H +V+HRD+K N+LI+ K++DFGLA+ G T V+
Sbjct: 109 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 165
Query: 245 GTFGYVAPE------YASTGMLNERSDVYSFGILIMEVISGR 280
T Y APE Y ST + D++S G + E+++ R
Sbjct: 166 -TLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVTRR 201
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 82/162 (50%), Gaps = 18/162 (11%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E+ + + H N+V+LL LV+E+++ +L++++ D + + + +
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSY 109
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVM 244
+ +GL++ H +V+HRD+K N+LI+ K++DFGLA+ G T V+
Sbjct: 110 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 166
Query: 245 GTFGYVAPE------YASTGMLNERSDVYSFGILIMEVISGR 280
T Y APE Y ST + D++S G + E+++ R
Sbjct: 167 -TLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVTRR 202
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 82/162 (50%), Gaps = 18/162 (11%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E+ + + H N+V+LL LV+E+++ +L++++ D + + + +
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSY 107
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVM 244
+ +GL++ H +V+HRD+K N+LI+ K++DFGLA+ G T V+
Sbjct: 108 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 164
Query: 245 GTFGYVAPE------YASTGMLNERSDVYSFGILIMEVISGR 280
T Y APE Y ST + D++S G + E+++ R
Sbjct: 165 -TLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVTRR 200
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 82/162 (50%), Gaps = 18/162 (11%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E+ + + H N+V+LL LV+E+++ +L++++ D + + + +
Sbjct: 59 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSY 115
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVM 244
+ +GL++ H +V+HRD+K N+LI+ K++DFGLA+ G T V+
Sbjct: 116 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 172
Query: 245 GTFGYVAPE------YASTGMLNERSDVYSFGILIMEVISGR 280
T Y APE Y ST + D++S G + E+++ R
Sbjct: 173 -TLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVTRR 208
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 82/162 (50%), Gaps = 18/162 (11%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E+ + + H N+V+LL LV+E+++ +L++++ D + + + +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSY 108
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVM 244
+ +GL++ H +V+HRD+K N+LI+ K++DFGLA+ G T V+
Sbjct: 109 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 165
Query: 245 GTFGYVAPE------YASTGMLNERSDVYSFGILIMEVISGR 280
T Y APE Y ST + D++S G + E+++ R
Sbjct: 166 -TLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 82/162 (50%), Gaps = 18/162 (11%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E+ + + H N+V+LL LV+E+++ +L++++ D + + + +
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSY 107
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVM 244
+ +GL++ H +V+HRD+K N+LI+ K++DFGLA+ G T V+
Sbjct: 108 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 164
Query: 245 GTFGYVAPE------YASTGMLNERSDVYSFGILIMEVISGR 280
T Y APE Y ST + D++S G + E+++ R
Sbjct: 165 -TLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVTRR 200
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 82/162 (50%), Gaps = 18/162 (11%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E+ + + H N+V+LL LV+E+++ +L++++ D + + + +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSY 108
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVM 244
+ +GL++ H +V+HRD+K N+LI+ K++DFGLA+ G T V+
Sbjct: 109 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 165
Query: 245 GTFGYVAPE------YASTGMLNERSDVYSFGILIMEVISGR 280
T Y APE Y ST + D++S G + E+++ R
Sbjct: 166 -TLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVTRR 201
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 82/162 (50%), Gaps = 13/162 (8%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
EVE + ++ H N+++L + + +V E G L ++ + I
Sbjct: 71 EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAARI 126
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILI---DKHWNPKVSDFGLAKLLGSESSYITT 241
I G++Y+H+ +VHRD+K NIL+ +K + K+ DFGL+ +++ +
Sbjct: 127 IKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF-QQNTKMKD 182
Query: 242 RVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPV 283
R+ GT Y+APE G +E+ DV+S G+++ ++SG P
Sbjct: 183 RI-GTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSGTPPF 222
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 83/163 (50%), Gaps = 13/163 (7%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
EV+ + ++ H N+++L + + + LV E G L ++ + I
Sbjct: 100 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDAARI 155
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILID---KHWNPKVSDFGLAKLLGSESSYITT 241
I G++Y+H+ K+VHRD+K N+L++ K N ++ DFGL+ E+S
Sbjct: 156 IRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF--EASKKMK 210
Query: 242 RVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVD 284
+GT Y+APE G +E+ DV+S G+++ ++SG P +
Sbjct: 211 DKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSGCPPFN 252
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 71/149 (47%), Gaps = 13/149 (8%)
Query: 134 HKNLVRLLGYCAEG-----AHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGT 188
H N+VRL+ CA LV+E+V+ +L +L D P L E +++
Sbjct: 65 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYL--DKAPPPGLPAETIKDLMRQF 121
Query: 189 AKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFG 248
+GL +LH +VHRD+K NIL+ K++DFGLA++ + + V+ T
Sbjct: 122 LRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMAL--DPVVVTLW 176
Query: 249 YVAPEYASTGMLNERSDVYSFGILIMEVI 277
Y APE D++S G + E+
Sbjct: 177 YRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 82/156 (52%), Gaps = 9/156 (5%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E+ + ++H N+V+L +LV+E+++ +L++ L G +T + +
Sbjct: 50 EISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAK---SF 105
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVM 244
+L G++Y H+ +V+HRD+K N+LI++ K++DFGLA+ G T V+
Sbjct: 106 LLQLLNGIAYCHD---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV 162
Query: 245 GTFGYVAPE-YASTGMLNERSDVYSFGILIMEVISG 279
T Y AP+ + + D++S G + E+++G
Sbjct: 163 -TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 82/156 (52%), Gaps = 9/156 (5%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E+ + ++H N+V+L +LV+E+++ +L++ L G +T + +
Sbjct: 50 EISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAK---SF 105
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVM 244
+L G++Y H+ +V+HRD+K N+LI++ K++DFGLA+ G T V+
Sbjct: 106 LLQLLNGIAYCHD---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV 162
Query: 245 GTFGYVAPE-YASTGMLNERSDVYSFGILIMEVISG 279
T Y AP+ + + D++S G + E+++G
Sbjct: 163 -TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 70/149 (46%), Gaps = 20/149 (13%)
Query: 191 GLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYV 250
GL LH ++V+RD+K NIL+D H + ++SD GLA + E I RV GT GY+
Sbjct: 298 GLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGLAVHV-PEGQTIKGRV-GTVGYM 352
Query: 251 APEYASTGMLNERSDVYSFGILIMEVISGRIPVDYSRPPEEVNLIEWLKKMVTNRNPEGV 310
APE D ++ G L+ E+I+G+ P + + +E L K V
Sbjct: 353 APEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEV-------- 404
Query: 311 LDPKLPEKPTSRL--LKRILLVALRCVDP 337
PE+ + R R L L C DP
Sbjct: 405 -----PEEYSERFSPQARSLCSQLLCKDP 428
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 81/180 (45%), Gaps = 16/180 (8%)
Query: 106 VAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQW 165
+A + L G E E V + +++H N+V L G H L+ + V+ G
Sbjct: 51 IAKEALEGKEGSMENEIAV----LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGE---- 102
Query: 166 LHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNIL---IDKHWNPK 222
L + T +I + YLH + +VHRD+K N+L +D+
Sbjct: 103 LFDRIVEKGFYTERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIM 159
Query: 223 VSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIP 282
+SDFGL+K+ + + + GT GYVAPE + ++ D +S G++ ++ G P
Sbjct: 160 ISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 70/149 (46%), Gaps = 20/149 (13%)
Query: 191 GLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYV 250
GL LH ++V+RD+K NIL+D H + ++SD GLA + E I RV GT GY+
Sbjct: 298 GLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGLAVHV-PEGQTIKGRV-GTVGYM 352
Query: 251 APEYASTGMLNERSDVYSFGILIMEVISGRIPVDYSRPPEEVNLIEWLKKMVTNRNPEGV 310
APE D ++ G L+ E+I+G+ P + + +E L K V
Sbjct: 353 APEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEV-------- 404
Query: 311 LDPKLPEKPTSRL--LKRILLVALRCVDP 337
PE+ + R R L L C DP
Sbjct: 405 -----PEEYSERFSPQARSLCSQLLCKDP 428
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 97/203 (47%), Gaps = 29/203 (14%)
Query: 123 KVEVEAIGRVRHKNLVRL-LGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIR 181
K+E + + V H +V+L + EG L+ +++ G+L L +V T E
Sbjct: 75 KMERDILVEVNHPFIVKLHYAFQTEGK-LYLILDFLRGGDLFTRLSKEV----MFTEEDV 129
Query: 182 MNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAK--LLGSESSYI 239
+ A L +LH +++RD+K NIL+D+ + K++DFGL+K + + +Y
Sbjct: 130 KFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAY- 185
Query: 240 TTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVDYSRPPEEVNLI---- 295
GT Y+APE + + +D +SFG+L+ E+++G +P E + +I
Sbjct: 186 --SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAK 243
Query: 296 -----------EWLKKMVTNRNP 307
+ L +M+ RNP
Sbjct: 244 LGMPQFLSPEAQSLLRMLFKRNP 266
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 114/255 (44%), Gaps = 41/255 (16%)
Query: 105 KVAVKNLLNNRGQAEREFKVEVEAIGRV-RHKNLVRLLG-YCAEGAHRM-----LVYEYV 157
++A +++ G E E K E+ + + H+N+ G + + M LV E+
Sbjct: 50 QLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFC 109
Query: 158 NNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
G++ + G + L E I +GLS+LH+ KV+HRDIK N+L+ +
Sbjct: 110 GAGSVTDLIKNTKG--NTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTE 164
Query: 218 HWNPKVSDFG----LAKLLGSESSYITTRVMGTFGYVAPEYAST-----GMLNERSDVYS 268
+ K+ DFG L + +G +++I GT ++APE + + +SD++S
Sbjct: 165 NAEVKLVDFGVSAQLDRTVGRRNTFI-----GTPYWMAPEVIACDENPDATYDFKSDLWS 219
Query: 269 FGILIMEVISGRIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRIL 328
GI +E+ G P+ P + LI RNP P+L K S+ + +
Sbjct: 220 LGITAIEMAEGAPPLCDMHPMRALFLIP--------RNPA----PRLKSKKWSKKFQSFI 267
Query: 329 LVALRCVDPNAQKRP 343
C+ N +RP
Sbjct: 268 ---ESCLVKNHSQRP 279
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 70/149 (46%), Gaps = 13/149 (8%)
Query: 134 HKNLVRLLGYCAEG-----AHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGT 188
H N+VRL C LV+E+V+ +L +L P P E +++
Sbjct: 73 HPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPT--ETIKDMMFQL 129
Query: 189 AKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFG 248
+GL +LH +VVHRD+K NIL+ K++DFGLA++ + + T V+ T
Sbjct: 130 LRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMAL--TSVVVTLW 184
Query: 249 YVAPEYASTGMLNERSDVYSFGILIMEVI 277
Y APE D++S G + E+
Sbjct: 185 YRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 90/184 (48%), Gaps = 20/184 (10%)
Query: 105 KVAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+VAVK L + A+R ++ E+ + ++H+N++ LL R L E N+
Sbjct: 69 RVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDVY 123
Query: 162 LEQWLHG----DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
L L G ++ C LT + +I +GL Y+H ++HRD+K SN+ +++
Sbjct: 124 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNE 180
Query: 218 HWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGM-LNERSDVYSFGILIMEV 276
K+ DFGLA+ E + T Y APE M N+ D++S G ++ E+
Sbjct: 181 DCELKILDFGLARHTDDE----MXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 236
Query: 277 ISGR 280
++GR
Sbjct: 237 LTGR 240
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 92/185 (49%), Gaps = 22/185 (11%)
Query: 105 KVAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+VAVK L + A+R ++ E+ + ++H+N++ LL R L E N+
Sbjct: 49 RVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDVY 103
Query: 162 LEQWLHG----DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
L L G ++ C LT + +I +GL Y+H ++HRD+K SN+ +++
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNE 160
Query: 218 HWNPKVSDFGLAKLLGSE-SSYITTRVMGTFGYVAPEYASTGM-LNERSDVYSFGILIME 275
K+ D GLA+ E + Y+ TR Y APE M N+ D++S G ++ E
Sbjct: 161 DCELKILDRGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAE 215
Query: 276 VISGR 280
+++GR
Sbjct: 216 LLTGR 220
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 81/162 (50%), Gaps = 18/162 (11%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E+ + + H N+V+LL LV+E+V+ +L+ ++ D + + + +
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEHVHQ-DLKTFM--DASALTGIPLPLIKSY 107
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVM 244
+ +GL++ H +V+HRD+K N+LI+ K++DFGLA+ G T V+
Sbjct: 108 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 164
Query: 245 GTFGYVAPE------YASTGMLNERSDVYSFGILIMEVISGR 280
T Y APE Y ST + D++S G + E+++ R
Sbjct: 165 -TLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVTRR 200
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 97/203 (47%), Gaps = 29/203 (14%)
Query: 123 KVEVEAIGRVRHKNLVRL-LGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIR 181
K+E + + V H +V+L + EG L+ +++ G+L L +V T E
Sbjct: 74 KMERDILVEVNHPFIVKLHYAFQTEGK-LYLILDFLRGGDLFTRLSKEV----MFTEEDV 128
Query: 182 MNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAK--LLGSESSYI 239
+ A L +LH +++RD+K NIL+D+ + K++DFGL+K + + +Y
Sbjct: 129 KFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAY- 184
Query: 240 TTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVDYSRPPEEVNLI---- 295
GT Y+APE + + +D +SFG+L+ E+++G +P E + +I
Sbjct: 185 --SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAK 242
Query: 296 -----------EWLKKMVTNRNP 307
+ L +M+ RNP
Sbjct: 243 LGMPQFLSPEAQSLLRMLFKRNP 265
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 87/184 (47%), Gaps = 20/184 (10%)
Query: 106 VAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCA-----EGAHRMLVYEYV 157
VA+K L N+ A+R ++ E+ + V HKN++ LL E + + +
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 110
Query: 158 NNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
+ NL Q + + L E ++ G+ +LH ++HRD+K SNI++
Sbjct: 111 MDANLSQVIQME------LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKS 161
Query: 218 HWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVI 277
K+ DFGLA+ G +S++ T + T Y APE E D++S G ++ E+I
Sbjct: 162 DCTLKILDFGLARTAG--TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
Query: 278 SGRI 281
G +
Sbjct: 220 KGGV 223
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 75/161 (46%), Gaps = 12/161 (7%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E+ + +++H N+V L G H L+ + V+ G L + T +
Sbjct: 66 EIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGE----LFDRIVEKGFYTERDASRL 121
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNIL---IDKHWNPKVSDFGLAKLLGSESSYITT 241
I + YLH + +VHRD+K N+L +D+ +SDFGL+K+ + + +
Sbjct: 122 IFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLS 176
Query: 242 RVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIP 282
GT GYVAPE + ++ D +S G++ ++ G P
Sbjct: 177 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 92/185 (49%), Gaps = 22/185 (11%)
Query: 105 KVAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+VAVK L + A+R ++ E+ + ++H+N++ LL R L E N+
Sbjct: 49 RVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDVY 103
Query: 162 LEQWLHG----DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
L L G ++ C LT + +I +GL Y+H ++HRD+K SN+ +++
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNE 160
Query: 218 HWNPKVSDFGLAKLLGSE-SSYITTRVMGTFGYVAPEYASTGM-LNERSDVYSFGILIME 275
K+ D GLA+ E + Y+ TR Y APE M N+ D++S G ++ E
Sbjct: 161 DCELKILDGGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAE 215
Query: 276 VISGR 280
+++GR
Sbjct: 216 LLTGR 220
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 90/186 (48%), Gaps = 24/186 (12%)
Query: 106 VAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCA------EGAHRMLVYEY 156
VA+K L N+ A+R ++ E+ + V HKN++ LL E LV E
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 110
Query: 157 VNNGNLEQWLHGDVGPCSPLTWEIRMNIIL-GTAKGLSYLHEGLEPKVVHRDIKSSNILI 215
++ NL Q + ++ RM+ +L G+ +LH ++HRD+K SNI++
Sbjct: 111 MD-ANLXQVIQMELD-------HERMSYLLYQMLXGIKHLHSA---GIIHRDLKPSNIVV 159
Query: 216 DKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIME 275
K+ DFGLA+ G +S++ T + T Y APE E D++S G ++ E
Sbjct: 160 KSDXTLKILDFGLARTAG--TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
Query: 276 VISGRI 281
++ +I
Sbjct: 218 MVRHKI 223
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 81/180 (45%), Gaps = 16/180 (8%)
Query: 106 VAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQW 165
+A + L G E E V + +++H N+V L G H L+ + V+ G
Sbjct: 51 IAKEALEGKEGSMENEIAV----LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGE---- 102
Query: 166 LHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNIL---IDKHWNPK 222
L + T +I + YLH + +VHRD+K N+L +D+
Sbjct: 103 LFDRIVEKGFYTERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIM 159
Query: 223 VSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIP 282
+SDFGL+K+ + + + GT GYVAPE + ++ D +S G++ ++ G P
Sbjct: 160 ISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 96/195 (49%), Gaps = 21/195 (10%)
Query: 103 NSKVAVKNLLNNRGQAEREFKVEVEAIGRV-RHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
N + AVK + +++R+ E+E + R +H N++ L +G + +V E + G
Sbjct: 47 NMEFAVKII----DKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGE 102
Query: 162 L-EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNIL-IDKHW 219
L ++ L + ++ K + YLH VVHRD+K SNIL +D+
Sbjct: 103 LLDKILRQKF-----FSEREASAVLFTITKTVEYLHA---QGVVHRDLKPSNILYVDESG 154
Query: 220 NP---KVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEV 276
NP ++ DFG AK L +E+ + T T +VAPE + D++S G+L+ +
Sbjct: 155 NPESIRICDFGFAKQLRAENGLLMTPCY-TANFVAPEVLERQGYDAACDIWSLGVLLYTM 213
Query: 277 ISGRIPVDYSRPPEE 291
++G P ++ P++
Sbjct: 214 LTGYTP--FANGPDD 226
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 99/187 (52%), Gaps = 15/187 (8%)
Query: 103 NSKVAVKNL-LNNRGQAE----REFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYV 157
N VA+K + L +R +A+ R E++ + + H N++ LL ++ LV++++
Sbjct: 35 NQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM 94
Query: 158 NNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
+LE + + +P + M L T +GL YLH+ ++HRD+K +N+L+D+
Sbjct: 95 ET-DLEVIIKDNSLVLTPSHIKAYM---LMTLQGLEYLHQHW---ILHRDLKPNNLLLDE 147
Query: 218 HWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYA-STGMLNERSDVYSFGILIMEV 276
+ K++DFGLAK GS + +V+ T Y APE M D+++ G ++ E+
Sbjct: 148 NGVLKLADFGLAKSFGSPNRAYXHQVV-TRWYRAPELLFGARMYGVGVDMWAVGCILAEL 206
Query: 277 ISGRIPV 283
+ R+P
Sbjct: 207 LL-RVPF 212
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 82/156 (52%), Gaps = 9/156 (5%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E+ + ++H N+V+L +LV+E+++ +L++ L G +T + +
Sbjct: 50 EISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAK---SF 105
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVM 244
+L G++Y H+ +V+HRD+K N+LI++ K++DFGLA+ G T ++
Sbjct: 106 LLQLLNGIAYCHD---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV 162
Query: 245 GTFGYVAPE-YASTGMLNERSDVYSFGILIMEVISG 279
T Y AP+ + + D++S G + E+++G
Sbjct: 163 -TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 70/149 (46%), Gaps = 13/149 (8%)
Query: 134 HKNLVRLLGYCAEG-----AHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGT 188
H N+VRL C LV+E+V+ +L +L P P E +++
Sbjct: 73 HPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPT--ETIKDMMFQL 129
Query: 189 AKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFG 248
+GL +LH +VVHRD+K NIL+ K++DFGLA++ + + T V+ T
Sbjct: 130 LRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMAL--TSVVVTLW 184
Query: 249 YVAPEYASTGMLNERSDVYSFGILIMEVI 277
Y APE D++S G + E+
Sbjct: 185 YRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 70/149 (46%), Gaps = 13/149 (8%)
Query: 134 HKNLVRLLGYCAEG-----AHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGT 188
H N+VRL C LV+E+V+ +L +L P P E +++
Sbjct: 73 HPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPT--ETIKDMMFQL 129
Query: 189 AKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFG 248
+GL +LH +VVHRD+K NIL+ K++DFGLA++ + + T V+ T
Sbjct: 130 LRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMAL--TSVVVTLW 184
Query: 249 YVAPEYASTGMLNERSDVYSFGILIMEVI 277
Y APE D++S G + E+
Sbjct: 185 YRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 91/189 (48%), Gaps = 24/189 (12%)
Query: 103 NSKVAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCA------EGAHRMLV 153
+ VA+K L N+ A+R ++ E+ + V HKN++ LL E LV
Sbjct: 42 DRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLV 100
Query: 154 YEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIIL-GTAKGLSYLHEGLEPKVVHRDIKSSN 212
E ++ NL Q + ++ RM+ +L G+ +LH ++HRD+K SN
Sbjct: 101 MELMD-ANLXQVIQMELD-------HERMSYLLYQMLXGIKHLHSA---GIIHRDLKPSN 149
Query: 213 ILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGIL 272
I++ K+ DFGLA+ G +S++ T + T Y APE E D++S G +
Sbjct: 150 IVVKSDXTLKILDFGLARTAG--TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCI 207
Query: 273 IMEVISGRI 281
+ E++ +I
Sbjct: 208 MGEMVRHKI 216
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 82/162 (50%), Gaps = 13/162 (8%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
EVE + ++ H N+++L + + +V E G L ++ + I
Sbjct: 71 EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAARI 126
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILI---DKHWNPKVSDFGLAKLLGSESSYITT 241
I G++Y+H+ +VHRD+K NIL+ +K + K+ DFGL+ +++ +
Sbjct: 127 IKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF-QQNTKMKD 182
Query: 242 RVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPV 283
R+ GT Y+APE G +E+ DV+S G+++ ++SG P
Sbjct: 183 RI-GTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSGTPPF 222
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 84/174 (48%), Gaps = 13/174 (7%)
Query: 113 NNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGP 172
+ RG + E + EV + +RH N++ L +L+ E V+ G L +L
Sbjct: 53 SRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL----AE 108
Query: 173 CSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNI-LIDKHW-NPKVS--DFGL 228
LT + + G+ YLH ++ H D+K NI L+DK+ NP++ DFG+
Sbjct: 109 KESLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGI 165
Query: 229 AKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIP 282
A + + + + + GT +VAPE + L +D++S G++ ++SG P
Sbjct: 166 AHKIEAGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 101/214 (47%), Gaps = 23/214 (10%)
Query: 102 DNSKVAVKNLLNNRGQAERE-FKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNG 160
+ S +A +++ + + E E + VE++ + H N+V+LL + ++ E+ G
Sbjct: 60 ETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGG 119
Query: 161 NLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWN 220
++ + + PLT + T L+YLH+ K++HRD+K+ NIL +
Sbjct: 120 AVDAVM---LELERPLTESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGD 173
Query: 221 PKVSDFGLAKLLGSESSYITTR--VMGTFGYVAPEYASTGMLNER-----SDVYSFGILI 273
K++DFG++ + I R +GT ++APE +R +DV+S GI +
Sbjct: 174 IKLADFGVS---AKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITL 230
Query: 274 MEVISGRIPVDYSRPPEEVNLIEWLKKMVTNRNP 307
+E+ + P E+N + L K+ + P
Sbjct: 231 IEM------AEIEPPHHELNPMRVLLKIAKSEPP 258
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 87/184 (47%), Gaps = 20/184 (10%)
Query: 106 VAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCA-----EGAHRMLVYEYV 157
VA+K L N+ A+R ++ E+ + V HKN++ LL E + + +
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 110
Query: 158 NNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
+ NL Q + + L E ++ G+ +LH ++HRD+K SNI++
Sbjct: 111 MDANLSQVIQME------LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKS 161
Query: 218 HWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVI 277
K+ DFGLA+ G +S++ T + T Y APE E D++S G ++ E+I
Sbjct: 162 DATLKILDFGLARTAG--TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
Query: 278 SGRI 281
G +
Sbjct: 220 KGGV 223
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 114/277 (41%), Gaps = 40/277 (14%)
Query: 102 DNSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCA--EGAHR--MLVYEYV 157
D A+K +L + Q E + E + H N++RL+ YC GA L+ +
Sbjct: 53 DGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFF 112
Query: 158 NNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
G L + + LT + + ++LG +GL +H HRD+K +NIL+
Sbjct: 113 KRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH---AKGYAHRDLKPTNILLGD 169
Query: 218 HWNPKVSDFG-----LAKLLGSESSYITTRVMG---TFGYVAPEYAST---GMLNERSDV 266
P + D G + GS + T Y APE S +++ER+DV
Sbjct: 170 EGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDV 229
Query: 267 YSFGILIMEVISGRIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPK----LPEKPTSR 322
+S G ++ ++ G P D MV + L + +P+ P
Sbjct: 230 WSLGCVLYAMMFGEGPYD----------------MVFQKGDSVALAVQNQLSIPQSPRHS 273
Query: 323 LLKRILLVALRCVDPNAQKRPKMGHVVHMLEAQESPS 359
LL ++ VDP+ +RP + ++ LEA + P+
Sbjct: 274 SALWQLLNSMMTVDPH--QRPHIPLLLSQLEALQPPA 308
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 87/184 (47%), Gaps = 20/184 (10%)
Query: 106 VAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCA-----EGAHRMLVYEYV 157
VA+K L N+ A+R ++ E+ + V HKN++ LL E + + +
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 110
Query: 158 NNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
+ NL Q + + L E ++ G+ +LH ++HRD+K SNI++
Sbjct: 111 MDANLSQVIQME------LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKS 161
Query: 218 HWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVI 277
K+ DFGLA+ G +S++ T + T Y APE E D++S G ++ E+I
Sbjct: 162 DATLKILDFGLARTAG--TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
Query: 278 SGRI 281
G +
Sbjct: 220 KGGV 223
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 92/185 (49%), Gaps = 22/185 (11%)
Query: 105 KVAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+VAVK L + A+R ++ E+ + ++H+N++ LL R L E N+
Sbjct: 49 RVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDVY 103
Query: 162 LEQWLHG----DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
L L G ++ LT + +I +GL Y+H ++HRD+K SN+ +++
Sbjct: 104 LVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNE 160
Query: 218 HWNPKVSDFGLAKLLGSE-SSYITTRVMGTFGYVAPEYASTGM-LNERSDVYSFGILIME 275
K+ DFGLA+ E + Y+ TR Y APE M N+ D++S G ++ E
Sbjct: 161 DCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAE 215
Query: 276 VISGR 280
+++GR
Sbjct: 216 LLTGR 220
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 87/184 (47%), Gaps = 20/184 (10%)
Query: 106 VAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCA-----EGAHRMLVYEYV 157
VA+K L N+ A+R ++ E+ + V HKN++ LL E + + +
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 110
Query: 158 NNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
+ NL Q + + L E ++ G+ +LH ++HRD+K SNI++
Sbjct: 111 MDANLSQVIQME------LDHERMSYLLYQMLVGIKHLHSA---GIIHRDLKPSNIVVKS 161
Query: 218 HWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVI 277
K+ DFGLA+ G +S++ T + T Y APE E D++S G ++ E+I
Sbjct: 162 DATLKILDFGLARTAG--TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
Query: 278 SGRI 281
G +
Sbjct: 220 KGGV 223
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 82/162 (50%), Gaps = 13/162 (8%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
EVE + ++ H N+++L + + +V E G L ++ + I
Sbjct: 71 EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAARI 126
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILI---DKHWNPKVSDFGLAKLLGSESSYITT 241
I G++Y+H+ +VHRD+K NIL+ +K + K+ DFGL+ +++ +
Sbjct: 127 IKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF-QQNTKMKD 182
Query: 242 RVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPV 283
R+ GT Y+APE G +E+ DV+S G+++ ++SG P
Sbjct: 183 RI-GTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSGTPPF 222
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 79/154 (51%), Gaps = 12/154 (7%)
Query: 134 HKNLVRLLGYC--AEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKG 191
H N++ L+G EG +L+ Y+ +G+L Q++ P T + ++ L A+G
Sbjct: 81 HPNVLALIGIMLPPEGLPHVLL-PYMCHGDLLQFIRS---PQRNPTVKDLISFGLQVARG 136
Query: 192 LSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTR---VMGTFG 248
+ YL E K VHRD+ + N ++D+ + KV+DFGLA+ + Y +
Sbjct: 137 MEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVK 193
Query: 249 YVAPEYASTGMLNERSDVYSFGILIMEVISGRIP 282
+ A E T +SDV+SFG+L+ E+++ P
Sbjct: 194 WTALESLQTYRFTTKSDVWSFGVLLWELLTRGAP 227
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 84/174 (48%), Gaps = 13/174 (7%)
Query: 113 NNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGP 172
+ RG + E + EV + +RH N++ L +L+ E V+ G L +L
Sbjct: 46 SRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL----AE 101
Query: 173 CSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNI-LIDKHW-NPKVS--DFGL 228
LT + + G+ YLH ++ H D+K NI L+DK+ NP++ DFG+
Sbjct: 102 KESLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGI 158
Query: 229 AKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIP 282
A + + + + + GT +VAPE + L +D++S G++ ++SG P
Sbjct: 159 AHKIEAGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 210
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 101/214 (47%), Gaps = 23/214 (10%)
Query: 102 DNSKVAVKNLLNNRGQAERE-FKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNG 160
+ S +A +++ + + E E + VE++ + H N+V+LL + ++ E+ G
Sbjct: 60 ETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGG 119
Query: 161 NLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWN 220
++ + + PLT + T L+YLH+ K++HRD+K+ NIL +
Sbjct: 120 AVDAVM---LELERPLTESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGD 173
Query: 221 PKVSDFGLAKLLGSESSYITTR--VMGTFGYVAPEYASTGMLNER-----SDVYSFGILI 273
K++DFG++ + I R +GT ++APE +R +DV+S GI +
Sbjct: 174 IKLADFGVS---AKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITL 230
Query: 274 MEVISGRIPVDYSRPPEEVNLIEWLKKMVTNRNP 307
+E+ + P E+N + L K+ + P
Sbjct: 231 IEM------AEIEPPHHELNPMRVLLKIAKSEPP 258
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 89/190 (46%), Gaps = 32/190 (16%)
Query: 106 VAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
VA+K L N+ A+R ++ E+ + V HKN++ LL + +L
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNV------------FTPQKSL 98
Query: 163 EQWLH-------GDVGPCSPLTWEI---RMNIIL-GTAKGLSYLHEGLEPKVVHRDIKSS 211
E++ D C + E+ RM+ +L G+ +LH ++HRD+K S
Sbjct: 99 EEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPS 155
Query: 212 NILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGI 271
NI++ K+ DFGLA+ G +S++ T + T Y APE E D++S G
Sbjct: 156 NIVVKSDCTLKILDFGLARTAG--TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 213
Query: 272 LIMEVISGRI 281
++ E+I G +
Sbjct: 214 IMGEMIKGGV 223
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 88/189 (46%), Gaps = 30/189 (15%)
Query: 106 VAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCA------EGAHRMLVYEY 156
VA+K L N+ A+R ++ E+ + V HKN++ LL E LV E
Sbjct: 51 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 109
Query: 157 VNNGNLEQWLHGDVGPCSPLTWEI---RMNIIL-GTAKGLSYLHEGLEPKVVHRDIKSSN 212
+ D C + E+ RM+ +L G+ +LH ++HRD+K SN
Sbjct: 110 M-----------DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSN 155
Query: 213 ILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGIL 272
I++ K+ DFGLA+ G +S++ T + T Y APE E D++S G +
Sbjct: 156 IVVKSDCTLKILDFGLARTAG--TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCI 213
Query: 273 IMEVISGRI 281
+ E++ +I
Sbjct: 214 MGEMVRHKI 222
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 88/189 (46%), Gaps = 30/189 (15%)
Query: 106 VAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCA------EGAHRMLVYEY 156
VA+K L N+ A+R ++ E+ + V HKN++ LL E LV E
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 110
Query: 157 VNNGNLEQWLHGDVGPCSPLTWEI---RMNIIL-GTAKGLSYLHEGLEPKVVHRDIKSSN 212
+ D C + E+ RM+ +L G+ +LH ++HRD+K SN
Sbjct: 111 M-----------DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSN 156
Query: 213 ILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGIL 272
I++ K+ DFGLA+ G +S++ T + T Y APE E D++S G +
Sbjct: 157 IVVKSDCTLKILDFGLARTAG--TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCI 214
Query: 273 IMEVISGRI 281
+ E++ +I
Sbjct: 215 MGEMVRHKI 223
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 88/189 (46%), Gaps = 30/189 (15%)
Query: 106 VAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCA------EGAHRMLVYEY 156
VA+K L N+ A+R ++ E+ + V HKN++ LL E LV E
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 110
Query: 157 VNNGNLEQWLHGDVGPCSPLTWEI---RMNIIL-GTAKGLSYLHEGLEPKVVHRDIKSSN 212
+ D C + E+ RM+ +L G+ +LH ++HRD+K SN
Sbjct: 111 M-----------DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSN 156
Query: 213 ILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGIL 272
I++ K+ DFGLA+ G +S++ T + T Y APE E D++S G +
Sbjct: 157 IVVKSDCTLKILDFGLARTAG--TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCI 214
Query: 273 IMEVISGRI 281
+ E++ +I
Sbjct: 215 MGEMVRHKI 223
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 90/186 (48%), Gaps = 18/186 (9%)
Query: 104 SKVAVKNL--LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
++VA+K + ++ +R + E++ + R RH+N++ + + Y+
Sbjct: 69 TRVAIKKISPFEHQTYCQRTLR-EIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDL 127
Query: 162 LEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
+E L+ + L+ + + +GL Y+H V+HRD+K SN+LI+ +
Sbjct: 128 METDLY-KLLKSQQLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLINTTCDL 183
Query: 222 KVSDFGLAKLLGSESSY--ITTRVMGTFGYVAPEYASTGMLNERS-----DVYSFGILIM 274
K+ DFGLA++ E + T + T Y APE MLN + D++S G ++
Sbjct: 184 KICDFGLARIADPEHDHTGFLTEXVATRWYRAPEI----MLNSKGYTKSIDIWSVGCILA 239
Query: 275 EVISGR 280
E++S R
Sbjct: 240 EMLSNR 245
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 92/185 (49%), Gaps = 22/185 (11%)
Query: 105 KVAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+VAVK L + A+R ++ E+ + ++H+N++ LL R L E N+
Sbjct: 49 RVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDVY 103
Query: 162 LEQWLHG----DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
L L G ++ LT + +I +GL Y+H ++HRD+K SN+ +++
Sbjct: 104 LVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNE 160
Query: 218 HWNPKVSDFGLAKLLGSE-SSYITTRVMGTFGYVAPEYASTGM-LNERSDVYSFGILIME 275
K+ DFGLA+ E + Y+ TR Y APE M N+ D++S G ++ E
Sbjct: 161 DXELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAE 215
Query: 276 VISGR 280
+++GR
Sbjct: 216 LLTGR 220
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 101/214 (47%), Gaps = 23/214 (10%)
Query: 102 DNSKVAVKNLLNNRGQAERE-FKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNG 160
+ S +A +++ + + E E + VE++ + H N+V+LL + ++ E+ G
Sbjct: 60 ETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGG 119
Query: 161 NLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWN 220
++ + + PLT + T L+YLH+ K++HRD+K+ NIL +
Sbjct: 120 AVDAVM---LELERPLTESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGD 173
Query: 221 PKVSDFGLAKLLGSESSYITTR--VMGTFGYVAPEYASTGMLNER-----SDVYSFGILI 273
K++DFG++ + I R +GT ++APE +R +DV+S GI +
Sbjct: 174 IKLADFGVS---AKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITL 230
Query: 274 MEVISGRIPVDYSRPPEEVNLIEWLKKMVTNRNP 307
+E+ + P E+N + L K+ + P
Sbjct: 231 IEM------AEIEPPHHELNPMRVLLKIAKSEPP 258
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 90/186 (48%), Gaps = 24/186 (12%)
Query: 106 VAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCA------EGAHRMLVYEY 156
VA+K L N+ A+R ++ E+ + V HKN++ LL E LV E
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 110
Query: 157 VNNGNLEQWLHGDVGPCSPLTWEIRMNIIL-GTAKGLSYLHEGLEPKVVHRDIKSSNILI 215
++ NL Q + ++ RM+ +L G+ +LH ++HRD+K SNI++
Sbjct: 111 MD-ANLXQVIQMELD-------HERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVV 159
Query: 216 DKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIME 275
K+ DFGLA+ G +S++ T + T Y APE E D++S G ++ E
Sbjct: 160 KSDXTLKILDFGLARTAG--TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
Query: 276 VISGRI 281
++ +I
Sbjct: 218 MVRHKI 223
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 89/192 (46%), Gaps = 30/192 (15%)
Query: 103 NSKVAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCA------EGAHRMLV 153
+ VA+K L N+ A+R ++ E+ + V HKN++ LL E LV
Sbjct: 43 DRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLV 101
Query: 154 YEYVNNGNLEQWLHGDVGPCSPLTWEI---RMNIIL-GTAKGLSYLHEGLEPKVVHRDIK 209
E + D C + E+ RM+ +L G+ +LH ++HRD+K
Sbjct: 102 MELM-----------DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLK 147
Query: 210 SSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSF 269
SNI++ K+ DFGLA+ G +S++ T + T Y APE E D++S
Sbjct: 148 PSNIVVKSDCTLKILDFGLARTAG--TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSV 205
Query: 270 GILIMEVISGRI 281
G ++ E++ +I
Sbjct: 206 GCIMGEMVRHKI 217
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 88/189 (46%), Gaps = 30/189 (15%)
Query: 106 VAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCA------EGAHRMLVYEY 156
VA+K L N+ A+R ++ E+ + V HKN++ LL E LV E
Sbjct: 53 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 111
Query: 157 VNNGNLEQWLHGDVGPCSPLTWEI---RMNIIL-GTAKGLSYLHEGLEPKVVHRDIKSSN 212
+ D C + E+ RM+ +L G+ +LH ++HRD+K SN
Sbjct: 112 M-----------DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSN 157
Query: 213 ILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGIL 272
I++ K+ DFGLA+ G +S++ T + T Y APE E D++S G +
Sbjct: 158 IVVKSDCTLKILDFGLARTAG--TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCI 215
Query: 273 IMEVISGRI 281
+ E++ +I
Sbjct: 216 MGEMVRHKI 224
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 95/184 (51%), Gaps = 18/184 (9%)
Query: 102 DNSKVAVKNLLNNRGQAERE-FKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNG 160
+ S +A +++ + + E E + VE++ + H N+V+LL + ++ E+ G
Sbjct: 33 ETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGG 92
Query: 161 NLEQWLHGDVGPCSPLTWEIRMNIILG-TAKGLSYLHEGLEPKVVHRDIKSSNILIDKHW 219
++ + + PLT E ++ ++ T L+YLH+ K++HRD+K+ NIL
Sbjct: 93 AVDAVM---LELERPLT-ESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDG 145
Query: 220 NPKVSDFGLAKLLGSESSYITTR--VMGTFGYVAPEYASTGMLNER-----SDVYSFGIL 272
+ K++DFG++ + + I R +GT ++APE +R +DV+S GI
Sbjct: 146 DIKLADFGVSA--KNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGIT 203
Query: 273 IMEV 276
++E+
Sbjct: 204 LIEM 207
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 89/192 (46%), Gaps = 30/192 (15%)
Query: 103 NSKVAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCA------EGAHRMLV 153
+ VA+K L N+ A+R ++ E+ + V HKN++ LL E LV
Sbjct: 42 DRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLV 100
Query: 154 YEYVNNGNLEQWLHGDVGPCSPLTWEI---RMNIIL-GTAKGLSYLHEGLEPKVVHRDIK 209
E + D C + E+ RM+ +L G+ +LH ++HRD+K
Sbjct: 101 MELM-----------DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLK 146
Query: 210 SSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSF 269
SNI++ K+ DFGLA+ G +S++ T + T Y APE E D++S
Sbjct: 147 PSNIVVKSDCTLKILDFGLARTAG--TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSV 204
Query: 270 GILIMEVISGRI 281
G ++ E++ +I
Sbjct: 205 GCIMGEMVRHKI 216
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 89/192 (46%), Gaps = 30/192 (15%)
Query: 103 NSKVAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCA------EGAHRMLV 153
+ VA+K L N+ A+R ++ E+ + V HKN++ LL E LV
Sbjct: 43 DRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLV 101
Query: 154 YEYVNNGNLEQWLHGDVGPCSPLTWEI---RMNIIL-GTAKGLSYLHEGLEPKVVHRDIK 209
E + D C + E+ RM+ +L G+ +LH ++HRD+K
Sbjct: 102 MELM-----------DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLK 147
Query: 210 SSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSF 269
SNI++ K+ DFGLA+ G +S++ T + T Y APE E D++S
Sbjct: 148 PSNIVVKSDCTLKILDFGLARTAG--TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSV 205
Query: 270 GILIMEVISGRI 281
G ++ E++ +I
Sbjct: 206 GCIMGEMVRHKI 217
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 88/189 (46%), Gaps = 30/189 (15%)
Query: 106 VAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCA------EGAHRMLVYEY 156
VA+K L N+ A+R ++ E+ + V HKN++ LL E LV E
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 110
Query: 157 VNNGNLEQWLHGDVGPCSPLTWEI---RMNIIL-GTAKGLSYLHEGLEPKVVHRDIKSSN 212
+ D C + E+ RM+ +L G+ +LH ++HRD+K SN
Sbjct: 111 M-----------DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSN 156
Query: 213 ILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGIL 272
I++ K+ DFGLA+ G +S++ T + T Y APE E D++S G +
Sbjct: 157 IVVKSDXTLKILDFGLARTAG--TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCI 214
Query: 273 IMEVISGRI 281
+ E++ +I
Sbjct: 215 MGEMVRHKI 223
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 89/190 (46%), Gaps = 32/190 (16%)
Query: 106 VAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
VA+K L N+ A+R ++ E+ + V HKN++ LL + +L
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNV------------FTPQKSL 98
Query: 163 EQWLH-------GDVGPCSPLTWEI---RMNIIL-GTAKGLSYLHEGLEPKVVHRDIKSS 211
E++ D C + E+ RM+ +L G+ +LH ++HRD+K S
Sbjct: 99 EEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPS 155
Query: 212 NILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGI 271
NI++ K+ DFGLA+ G +S++ T + T Y APE E D++S G
Sbjct: 156 NIVVKSDCTLKILDFGLARTAG--TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 213
Query: 272 LIMEVISGRI 281
++ E+I G +
Sbjct: 214 IMGEMIKGGV 223
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 99/213 (46%), Gaps = 36/213 (16%)
Query: 106 VAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHR----MLVYEYVNNGN 161
VAVK + ++R + + E+ +RH+N++ + H L+ Y G+
Sbjct: 34 VAVK-IFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGS 92
Query: 162 LEQWLHG---DVGPCSPLTWEIRMNIILGTAKGLSYLHEGL-----EPKVVHRDIKSSNI 213
L +L D C + I+L A GL++LH + +P + HRD+KS NI
Sbjct: 93 LYDYLQLTTLDTVSC--------LRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNI 144
Query: 214 LIDKHWNPKVSDFGLAKLLGSESSYITT----RVMGTFGYVAPEYASTGMLNE------R 263
L+ K+ ++D GLA + ++ + RV GT Y+APE + + R
Sbjct: 145 LVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTKRYMAPEVLDETIQVDCFDSYKR 203
Query: 264 SDVYSFGILIMEV----ISGRIPVDYSRPPEEV 292
D+++FG+++ EV +S I DY P +V
Sbjct: 204 VDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDV 236
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 89/190 (46%), Gaps = 32/190 (16%)
Query: 106 VAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
VA+K L N+ A+R ++ E+ + V HKN++ LL + +L
Sbjct: 53 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNV------------FTPQKSL 99
Query: 163 EQWLH-------GDVGPCSPLTWEI---RMNIIL-GTAKGLSYLHEGLEPKVVHRDIKSS 211
E++ D C + E+ RM+ +L G+ +LH ++HRD+K S
Sbjct: 100 EEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPS 156
Query: 212 NILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGI 271
NI++ K+ DFGLA+ G +S++ T + T Y APE E D++S G
Sbjct: 157 NIVVKSDCTLKILDFGLARTAG--TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 214
Query: 272 LIMEVISGRI 281
++ E+I G +
Sbjct: 215 IMGEMIKGGV 224
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 88/189 (46%), Gaps = 30/189 (15%)
Query: 106 VAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCA------EGAHRMLVYEY 156
VA+K L N+ A+R ++ E+ + V HKN++ LL E LV E
Sbjct: 53 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 111
Query: 157 VNNGNLEQWLHGDVGPCSPLTWEI---RMNIIL-GTAKGLSYLHEGLEPKVVHRDIKSSN 212
+ D C + E+ RM+ +L G+ +LH ++HRD+K SN
Sbjct: 112 M-----------DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSN 157
Query: 213 ILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGIL 272
I++ K+ DFGLA+ G +S++ T + T Y APE E D++S G +
Sbjct: 158 IVVKSDCTLKILDFGLARTAG--TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCI 215
Query: 273 IMEVISGRI 281
+ E++ +I
Sbjct: 216 MGEMVRHKI 224
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 81/163 (49%), Gaps = 13/163 (7%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
EV+ + ++ H N+ +L + + + LV E G L ++ + I
Sbjct: 76 EVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDAARI 131
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILID---KHWNPKVSDFGLAKLLGSESSYITT 241
I G++Y H+ K+VHRD+K N+L++ K N ++ DFGL+ E+S
Sbjct: 132 IRQVLSGITYXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF--EASKKXK 186
Query: 242 RVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVD 284
+GT Y+APE G +E+ DV+S G+++ ++SG P +
Sbjct: 187 DKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSGCPPFN 228
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 88/189 (46%), Gaps = 30/189 (15%)
Query: 106 VAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCA------EGAHRMLVYEY 156
VA+K L N+ A+R ++ E+ + V HKN++ LL E LV E
Sbjct: 90 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 148
Query: 157 VNNGNLEQWLHGDVGPCSPLTWEI---RMNIIL-GTAKGLSYLHEGLEPKVVHRDIKSSN 212
+ D C + E+ RM+ +L G+ +LH ++HRD+K SN
Sbjct: 149 M-----------DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSN 194
Query: 213 ILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGIL 272
I++ K+ DFGLA+ G +S++ T + T Y APE E D++S G +
Sbjct: 195 IVVKSDCTLKILDFGLARTAG--TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCI 252
Query: 273 IMEVISGRI 281
+ E++ +I
Sbjct: 253 MGEMVRHKI 261
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 89/186 (47%), Gaps = 19/186 (10%)
Query: 103 NSKVAVKNLLNNRGQAEREFKVEVEAIGRV-RHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
N + AVK + +++R+ E+E + R +H N++ L +G + +V E G
Sbjct: 47 NXEFAVKII----DKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGE 102
Query: 162 L-EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNIL-IDKHW 219
L ++ L + ++ K + YLH VVHRD+K SNIL +D+
Sbjct: 103 LLDKILRQKF-----FSEREASAVLFTITKTVEYLHA---QGVVHRDLKPSNILYVDESG 154
Query: 220 NP---KVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEV 276
NP ++ DFG AK L +E+ + T T +VAPE + D++S G+L+
Sbjct: 155 NPESIRICDFGFAKQLRAENGLLXTPCY-TANFVAPEVLERQGYDAACDIWSLGVLLYTX 213
Query: 277 ISGRIP 282
++G P
Sbjct: 214 LTGYTP 219
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 83/172 (48%), Gaps = 13/172 (7%)
Query: 115 RGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCS 174
RG + E + EV + +RH N++ L +L+ E V+ G L +L
Sbjct: 69 RGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL----AEKE 124
Query: 175 PLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNI-LIDKHW-NPKVS--DFGLAK 230
LT + + G+ YLH ++ H D+K NI L+DK+ NP++ DFG+A
Sbjct: 125 SLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH 181
Query: 231 LLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIP 282
+ + + + + GT +VAPE + L +D++S G++ ++SG P
Sbjct: 182 KIEAGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 231
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 88/189 (46%), Gaps = 30/189 (15%)
Query: 106 VAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCA------EGAHRMLVYEY 156
VA+K L N+ A+R ++ E+ + V HKN++ LL E LV E
Sbjct: 90 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 148
Query: 157 VNNGNLEQWLHGDVGPCSPLTWEI---RMNIIL-GTAKGLSYLHEGLEPKVVHRDIKSSN 212
+ D C + E+ RM+ +L G+ +LH ++HRD+K SN
Sbjct: 149 M-----------DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSN 194
Query: 213 ILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGIL 272
I++ K+ DFGLA+ G +S++ T + T Y APE E D++S G +
Sbjct: 195 IVVKSDCTLKILDFGLARTAG--TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCI 252
Query: 273 IMEVISGRI 281
+ E++ +I
Sbjct: 253 MGEMVRHKI 261
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 99/213 (46%), Gaps = 36/213 (16%)
Query: 106 VAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHR----MLVYEYVNNGN 161
VAVK + ++R + + E+ +RH+N++ + H L+ Y G+
Sbjct: 34 VAVK-IFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGS 92
Query: 162 LEQWLHG---DVGPCSPLTWEIRMNIILGTAKGLSYLHEGL-----EPKVVHRDIKSSNI 213
L +L D C + I+L A GL++LH + +P + HRD+KS NI
Sbjct: 93 LYDYLQLTTLDTVSC--------LRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNI 144
Query: 214 LIDKHWNPKVSDFGLAKLLGSESSYITT----RVMGTFGYVAPEYASTGMLNE------R 263
L+ K+ ++D GLA + ++ + RV GT Y+APE + + R
Sbjct: 145 LVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTKRYMAPEVLDETIQVDCFDSYKR 203
Query: 264 SDVYSFGILIMEV----ISGRIPVDYSRPPEEV 292
D+++FG+++ EV +S I DY P +V
Sbjct: 204 VDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDV 236
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 81/162 (50%), Gaps = 18/162 (11%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E+ + + H N+V+LL LV+E+V+ +L++++ D + + + +
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEHVDQ-DLKKFM--DASALTGIPLPLIKSY 111
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVM 244
+ +GL++ H +V+HRD+K N+LI+ K++DFGLA+ G V+
Sbjct: 112 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 168
Query: 245 GTFGYVAPE------YASTGMLNERSDVYSFGILIMEVISGR 280
T Y APE Y ST + D++S G + E+++ R
Sbjct: 169 -TLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVTRR 204
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 97/204 (47%), Gaps = 16/204 (7%)
Query: 103 NSKVAVKNLLNNRGQAEREFKVEVEAIGRVR-HKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
N AVK +++ R +A + E+ A+ H N+V+L + H LV E +N G
Sbjct: 36 NQAFAVK-IISKRMEANTQ--KEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE 92
Query: 162 LEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILI---DKH 218
L + + + I+ +S++H+ VVHRD+K N+L + +
Sbjct: 93 LFERIKKK----KHFSETEASYIMRKLVSAVSHMHD---VGVVHRDLKPENLLFTDENDN 145
Query: 219 WNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS 278
K+ DFG A+L ++ + T T Y APE + +E D++S G+++ ++S
Sbjct: 146 LEIKIIDFGFARLKPPDNQPLKTPCF-TLHYAAPELLNQNGYDESCDLWSLGVILYTMLS 204
Query: 279 GRIPV-DYSRPPEEVNLIEWLKKM 301
G++P + R + +E +KK+
Sbjct: 205 GQVPFQSHDRSLTCTSAVEIMKKI 228
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 87/184 (47%), Gaps = 20/184 (10%)
Query: 106 VAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCA-----EGAHRMLVYEYV 157
VA+K L N+ A+R ++ E+ + V HKN++ LL E + + +
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 110
Query: 158 NNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
+ NL Q + + L E ++ G+ +LH ++HRD+K SNI++
Sbjct: 111 MDANLCQVIQME------LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKS 161
Query: 218 HWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVI 277
K+ DFGLA+ G +S++ T + T Y APE E D++S G ++ E+I
Sbjct: 162 DCTLKILDFGLARTAG--TSFMMTPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
Query: 278 SGRI 281
G +
Sbjct: 220 KGGV 223
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 95/203 (46%), Gaps = 34/203 (16%)
Query: 102 DNSKVAVKNL-LNNRGQAEREFKVEVEAIGRVRHKNLVRLL-GYCAEGAHRML------V 153
D+ A+K + L NR A + EV+A+ ++ H +VR + + L V
Sbjct: 29 DDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKV 88
Query: 154 YEYVN-----NGNLEQWLHGDVGPCSPLTWE--IRMNIILGTAKGLSYLH-EGLEPKVVH 205
Y Y+ NL+ W++G C+ E + ++I L A+ + +LH +GL +H
Sbjct: 89 YLYIQMQLCRKENLKDWMNGR---CTIEERERSVCLHIFLQIAEAVEFLHSKGL----MH 141
Query: 206 RDIKSSNILIDKHWNPKVSDFGLAKLLGS---ESSYIT--------TRVMGTFGYVAPEY 254
RD+K SNI KV DFGL + E + +T T +GT Y++PE
Sbjct: 142 RDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQ 201
Query: 255 ASTGMLNERSDVYSFGILIMEVI 277
+ + D++S G+++ E++
Sbjct: 202 IHGNSYSHKVDIFSLGLILFELL 224
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 85/181 (46%), Gaps = 14/181 (7%)
Query: 105 KVAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
KVAVK L + A R ++ E+ + ++H+N++ LL E
Sbjct: 47 KVAVKKLSRPFQSLIHARRTYR-ELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTT 105
Query: 162 LEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
L ++ C L+ E ++ +GL Y+H ++HRD+K SN+ +++
Sbjct: 106 LMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCEL 162
Query: 222 KVSDFGLAKLLGSE-SSYITTRVMGTFGYVAPEYASTGM-LNERSDVYSFGILIMEVISG 279
++ DFGLA+ E + Y+ TR Y APE M N+ D++S G ++ E++ G
Sbjct: 163 RILDFGLARQADEEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQG 217
Query: 280 R 280
+
Sbjct: 218 K 218
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 99/213 (46%), Gaps = 36/213 (16%)
Query: 106 VAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHR----MLVYEYVNNGN 161
VAVK + ++R + + E+ +RH+N++ + H L+ Y G+
Sbjct: 63 VAVK-IFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGS 121
Query: 162 LEQWLHG---DVGPCSPLTWEIRMNIILGTAKGLSYLHEGL-----EPKVVHRDIKSSNI 213
L +L D C + I+L A GL++LH + +P + HRD+KS NI
Sbjct: 122 LYDYLQLTTLDTVSC--------LRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNI 173
Query: 214 LIDKHWNPKVSDFGLAKLLGSESSYITT----RVMGTFGYVAPEYASTGMLNE------R 263
L+ K+ ++D GLA + ++ + RV GT Y+APE + + R
Sbjct: 174 LVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTKRYMAPEVLDETIQVDCFDSYKR 232
Query: 264 SDVYSFGILIMEV----ISGRIPVDYSRPPEEV 292
D+++FG+++ EV +S I DY P +V
Sbjct: 233 VDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDV 265
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 81/162 (50%), Gaps = 18/162 (11%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E+ + + H N+V+LL LV+E+++ +L++++ D + + + +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSY 108
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVM 244
+ +GL++ H +V+HRD+K N+LI+ K++DFGLA+ G V+
Sbjct: 109 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 165
Query: 245 GTFGYVAPE------YASTGMLNERSDVYSFGILIMEVISGR 280
T Y APE Y ST + D++S G + E+++ R
Sbjct: 166 -TLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVTRR 201
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 75/160 (46%), Gaps = 29/160 (18%)
Query: 138 VRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHE 197
+ L+G CAE L++ + G P+ I + + K L YL E
Sbjct: 103 MELMGTCAE--------------KLKKRMQG------PIPERILGKMTVAIVKALYYLKE 142
Query: 198 GLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEY--- 254
+ V+HRD+K SNIL+D+ K+ DFG++ L + + R G Y+APE
Sbjct: 143 --KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKA--KDRSAGCAAYMAPERIDP 198
Query: 255 --ASTGMLNERSDVYSFGILIMEVISGRIPVDYSRPPEEV 292
+ + R+DV+S GI ++E+ +G+ P + EV
Sbjct: 199 PDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEV 238
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 79/169 (46%), Gaps = 22/169 (13%)
Query: 179 EIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSY 238
+I I + K L +LH L V+HRD+K SN+LI+ K+ DFG++ L S
Sbjct: 153 DILGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYL--VDSV 208
Query: 239 ITTRVMGTFGYVAPEYASTGM----LNERSDVYSFGILIMEVISGRIPVDYSRPPEEVNL 294
T G Y+APE + + + +SD++S GI ++E+ R P D P
Sbjct: 209 AKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP----- 263
Query: 295 IEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNAQKRP 343
+ LK++V + P+ P + + +C+ N+++RP
Sbjct: 264 FQQLKQVVEEPS---------PQLPADKFSAEFVDFTSQCLKKNSKERP 303
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 81/162 (50%), Gaps = 18/162 (11%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E+ + + H N+V+LL LV+E+++ +L++++ D + + + +
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSY 107
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVM 244
+ +GL++ H +V+HRD+K N+LI+ K++DFGLA+ G V+
Sbjct: 108 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 164
Query: 245 GTFGYVAPE------YASTGMLNERSDVYSFGILIMEVISGR 280
T Y APE Y ST + D++S G + E+++ R
Sbjct: 165 -TLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVTRR 200
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 55/94 (58%), Gaps = 7/94 (7%)
Query: 191 GLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYV 250
GL ++H VV+RD+K +NIL+D+H + ++SD GLA + + + +GT GY+
Sbjct: 303 GLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---VGTHGYM 356
Query: 251 APEYASTGMLNERS-DVYSFGILIMEVISGRIPV 283
APE G+ + S D +S G ++ +++ G P
Sbjct: 357 APEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 390
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 81/162 (50%), Gaps = 18/162 (11%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E+ + + H N+V+LL LV+E+++ +L++++ D + + + +
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSY 107
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVM 244
+ +GL++ H +V+HRD+K N+LI+ K++DFGLA+ G V+
Sbjct: 108 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 164
Query: 245 GTFGYVAPE------YASTGMLNERSDVYSFGILIMEVISGR 280
T Y APE Y ST + D++S G + E+++ R
Sbjct: 165 -TLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVTRR 200
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 81/162 (50%), Gaps = 18/162 (11%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E+ + + H N+V+LL LV+E+++ +L++++ D + + + +
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSY 110
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVM 244
+ +GL++ H +V+HRD+K N+LI+ K++DFGLA+ G V+
Sbjct: 111 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 167
Query: 245 GTFGYVAPE------YASTGMLNERSDVYSFGILIMEVISGR 280
T Y APE Y ST + D++S G + E+++ R
Sbjct: 168 -TLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVTRR 203
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 81/162 (50%), Gaps = 18/162 (11%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E+ + + H N+V+LL LV+E+++ +L++++ D + + + +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSY 108
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVM 244
+ +GL++ H +V+HRD+K N+LI+ K++DFGLA+ G V+
Sbjct: 109 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 165
Query: 245 GTFGYVAPE------YASTGMLNERSDVYSFGILIMEVISGR 280
T Y APE Y ST + D++S G + E+++ R
Sbjct: 166 -TLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVTRR 201
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 55/94 (58%), Gaps = 7/94 (7%)
Query: 191 GLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYV 250
GL ++H VV+RD+K +NIL+D+H + ++SD GLA + + + +GT GY+
Sbjct: 304 GLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---VGTHGYM 357
Query: 251 APEYASTGMLNERS-DVYSFGILIMEVISGRIPV 283
APE G+ + S D +S G ++ +++ G P
Sbjct: 358 APEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 55/94 (58%), Gaps = 7/94 (7%)
Query: 191 GLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYV 250
GL ++H VV+RD+K +NIL+D+H + ++SD GLA + + + +GT GY+
Sbjct: 304 GLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---VGTHGYM 357
Query: 251 APEYASTGMLNERS-DVYSFGILIMEVISGRIPV 283
APE G+ + S D +S G ++ +++ G P
Sbjct: 358 APEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 55/94 (58%), Gaps = 7/94 (7%)
Query: 191 GLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYV 250
GL ++H VV+RD+K +NIL+D+H + ++SD GLA + + + +GT GY+
Sbjct: 304 GLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---VGTHGYM 357
Query: 251 APEYASTGMLNERS-DVYSFGILIMEVISGRIPV 283
APE G+ + S D +S G ++ +++ G P
Sbjct: 358 APEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 81/162 (50%), Gaps = 18/162 (11%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E+ + + H N+V+LL LV+E+++ +L++++ D + + + +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSY 108
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVM 244
+ +GL++ H +V+HRD+K N+LI+ K++DFGLA+ G V+
Sbjct: 109 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 165
Query: 245 GTFGYVAPE------YASTGMLNERSDVYSFGILIMEVISGR 280
T Y APE Y ST + D++S G + E+++ R
Sbjct: 166 -TLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVTRR 201
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 90/185 (48%), Gaps = 18/185 (9%)
Query: 105 KVAVKNL--LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
+VA+K + ++ +R + E++ + R RH+N++ + + Y+ +
Sbjct: 54 RVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM 112
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
E L+ + C L+ + + +GL Y+H V+HRD+K SN+L++ + K
Sbjct: 113 ETDLYK-LLKCQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLK 168
Query: 223 VSDFGLAKLLGSESSY--ITTRVMGTFGYVAPEYASTGMLNERS-----DVYSFGILIME 275
+ DFGLA++ + + T + T Y APE MLN + D++S G ++ E
Sbjct: 169 ICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI----MLNSKGYTKSIDIWSVGCILAE 224
Query: 276 VISGR 280
++S R
Sbjct: 225 MLSNR 229
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 81/162 (50%), Gaps = 18/162 (11%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E+ + + H N+V+LL LV+E+++ +L++++ D + + + +
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSY 111
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVM 244
+ +GL++ H +V+HRD+K N+LI+ K++DFGLA+ G V+
Sbjct: 112 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 168
Query: 245 GTFGYVAPE------YASTGMLNERSDVYSFGILIMEVISGR 280
T Y APE Y ST + D++S G + E+++ R
Sbjct: 169 -TLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 81/162 (50%), Gaps = 18/162 (11%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E+ + + H N+V+LL LV+E+++ +L++++ D + + + +
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSY 110
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVM 244
+ +GL++ H +V+HRD+K N+LI+ K++DFGLA+ G V+
Sbjct: 111 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 167
Query: 245 GTFGYVAPE------YASTGMLNERSDVYSFGILIMEVISGR 280
T Y APE Y ST + D++S G + E+++ R
Sbjct: 168 -TLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVTRR 203
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 81/162 (50%), Gaps = 18/162 (11%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E+ + + H N+V+LL LV+E+++ +L++++ D + + + +
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSY 109
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVM 244
+ +GL++ H +V+HRD+K N+LI+ K++DFGLA+ G V+
Sbjct: 110 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 166
Query: 245 GTFGYVAPE------YASTGMLNERSDVYSFGILIMEVISGR 280
T Y APE Y ST + D++S G + E+++ R
Sbjct: 167 -TLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVTRR 202
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 81/162 (50%), Gaps = 18/162 (11%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E+ + + H N+V+LL LV+E+++ +L++++ D + + + +
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSY 111
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVM 244
+ +GL++ H +V+HRD+K N+LI+ K++DFGLA+ G V+
Sbjct: 112 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 168
Query: 245 GTFGYVAPE------YASTGMLNERSDVYSFGILIMEVISGR 280
T Y APE Y ST + D++S G + E+++ R
Sbjct: 169 -TLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVTRR 204
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 81/162 (50%), Gaps = 18/162 (11%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E+ + + H N+V+LL LV+E+++ +L++++ D + + + +
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSY 109
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVM 244
+ +GL++ H +V+HRD+K N+LI+ K++DFGLA+ G V+
Sbjct: 110 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 166
Query: 245 GTFGYVAPE------YASTGMLNERSDVYSFGILIMEVISGR 280
T Y APE Y ST + D++S G + E+++ R
Sbjct: 167 -TLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVTRR 202
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 81/162 (50%), Gaps = 18/162 (11%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E+ + + H N+V+LL LV+E+++ +L++++ D + + + +
Sbjct: 56 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSY 112
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVM 244
+ +GL++ H +V+HRD+K N+LI+ K++DFGLA+ G V+
Sbjct: 113 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 169
Query: 245 GTFGYVAPE------YASTGMLNERSDVYSFGILIMEVISGR 280
T Y APE Y ST + D++S G + E+++ R
Sbjct: 170 -TLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVTRR 205
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 81/162 (50%), Gaps = 18/162 (11%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E+ + + H N+V+LL LV+E+++ +L++++ D + + + +
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSY 110
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVM 244
+ +GL++ H +V+HRD+K N+LI+ K++DFGLA+ G V+
Sbjct: 111 LFQLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 167
Query: 245 GTFGYVAPE------YASTGMLNERSDVYSFGILIMEVISGR 280
T Y APE Y ST + D++S G + E+++ R
Sbjct: 168 -TLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVTRR 203
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 80/162 (49%), Gaps = 15/162 (9%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL-EQWLHGDVGPCSPLTWEIRMN 183
E+ + +++H+N+V L H LV + V+ G L ++ L V T +
Sbjct: 56 EIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGV-----YTEKDASL 110
Query: 184 IILGTAKGLSYLHEGLEPKVVHRDIKSSNILI---DKHWNPKVSDFGLAKLLGSESSYIT 240
+I + YLHE +VHRD+K N+L +++ ++DFGL+K+ E + I
Sbjct: 111 VIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKM---EQNGIM 164
Query: 241 TRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIP 282
+ GT GYVAPE + ++ D +S G++ ++ G P
Sbjct: 165 STACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPP 206
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 81/162 (50%), Gaps = 18/162 (11%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E+ + + H N+V+LL LV+E+++ +L++++ D + + + +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSY 108
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVM 244
+ +GL++ H +V+HRD+K N+LI+ K++DFGLA+ G V+
Sbjct: 109 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 165
Query: 245 GTFGYVAPE------YASTGMLNERSDVYSFGILIMEVISGR 280
T Y APE Y ST + D++S G + E+++ R
Sbjct: 166 -TLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVTRR 201
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 116/259 (44%), Gaps = 37/259 (14%)
Query: 102 DNSKVAVKNLLNNRGQAERE-FKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNG 160
+ +A ++ + + E E + VE+E + H +V+LLG ++ E+ G
Sbjct: 42 ETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGG 101
Query: 161 NLEQ-WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHW 219
++ L D G P + ++ + L++LH +++HRD+K+ N+L+
Sbjct: 102 AVDAIMLELDRGLTEPQIQVVCRQML----EALNFLHSK---RIIHRDLKAGNVLMTLEG 154
Query: 220 NPKVSDFGLA----KLLGSESSYITTRVMGTFGYVAPEYASTGMLNE-----RSDVYSFG 270
+ +++DFG++ K L S+I GT ++APE + + ++D++S G
Sbjct: 155 DIRLADFGVSAKNLKTLQKRDSFI-----GTPYWMAPEVVMCETMKDTPYDYKADIWSLG 209
Query: 271 ILIMEVISGRIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLV 330
I ++E+ P E+N + L K + +P +L P S + L +
Sbjct: 210 ITLIEM------AQIEPPHHELNPMRVLLK-IAKSDPPTLLTP----SKWSVEFRDFLKI 258
Query: 331 ALRCVDPNAQKRPKMGHVV 349
AL D N + RP ++
Sbjct: 259 AL---DKNPETRPSAAQLL 274
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 81/162 (50%), Gaps = 18/162 (11%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E+ + + H N+V+LL LV+E+++ +L++++ D + + + +
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSY 109
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVM 244
+ +GL++ H +V+HRD+K N+LI+ K++DFGLA+ G V+
Sbjct: 110 LFQLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 166
Query: 245 GTFGYVAPE------YASTGMLNERSDVYSFGILIMEVISGR 280
T Y APE Y ST + D++S G + E+++ R
Sbjct: 167 -TLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVTRR 202
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 116/259 (44%), Gaps = 37/259 (14%)
Query: 102 DNSKVAVKNLLNNRGQAERE-FKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNG 160
+ +A ++ + + E E + VE+E + H +V+LLG ++ E+ G
Sbjct: 34 ETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGG 93
Query: 161 NLEQ-WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHW 219
++ L D G P + ++ + L++LH +++HRD+K+ N+L+
Sbjct: 94 AVDAIMLELDRGLTEPQIQVVCRQML----EALNFLHSK---RIIHRDLKAGNVLMTLEG 146
Query: 220 NPKVSDFGLA----KLLGSESSYITTRVMGTFGYVAPEYASTGMLNE-----RSDVYSFG 270
+ +++DFG++ K L S+I GT ++APE + + ++D++S G
Sbjct: 147 DIRLADFGVSAKNLKTLQKRDSFI-----GTPYWMAPEVVMCETMKDTPYDYKADIWSLG 201
Query: 271 ILIMEVISGRIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLV 330
I ++E+ P E+N + L K + +P +L P S + L +
Sbjct: 202 ITLIEM------AQIEPPHHELNPMRVLLK-IAKSDPPTLLTP----SKWSVEFRDFLKI 250
Query: 331 ALRCVDPNAQKRPKMGHVV 349
AL D N + RP ++
Sbjct: 251 AL---DKNPETRPSAAQLL 266
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 86/184 (46%), Gaps = 20/184 (10%)
Query: 106 VAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCA-----EGAHRMLVYEYV 157
VA+K L N+ A+R ++ E+ + V HKN++ LL E + + +
Sbjct: 54 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 112
Query: 158 NNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
+ NL Q + + L E ++ G+ +LH ++HRD+K SNI++
Sbjct: 113 MDANLCQVIQME------LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKS 163
Query: 218 HWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVI 277
K+ DFGLA+ G +S++ + T Y APE E D++S G ++ E+I
Sbjct: 164 DCTLKILDFGLARTAG--TSFMMVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 221
Query: 278 SGRI 281
G +
Sbjct: 222 KGGV 225
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 92/183 (50%), Gaps = 19/183 (10%)
Query: 105 KVAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
KVA+K L + A+R ++ E+ + ++H+N++ LL + Y++
Sbjct: 51 KVAIKKLSRPFQSEIFAKRAYR-ELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYL--- 106
Query: 162 LEQWLHGDVGPCSPLTW--EIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHW 219
+ ++ D+ L + E ++ KGL Y+H VVHRD+K N+ +++
Sbjct: 107 VMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDC 163
Query: 220 NPKVSDFGLAKLLGSE-SSYITTRVMGTFGYVAPEYASTGM-LNERSDVYSFGILIMEVI 277
K+ DFGLA+ +E + Y+ TR Y APE + M N+ D++S G ++ E++
Sbjct: 164 ELKILDFGLARHADAEMTGYVVTR-----WYRAPEVILSWMHYNQTVDIWSVGCIMAEML 218
Query: 278 SGR 280
+G+
Sbjct: 219 TGK 221
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 87/182 (47%), Gaps = 24/182 (13%)
Query: 175 PLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGS 234
P+T E ++ A+G+ +L K +HRD+ + NIL+ ++ K+ DFGLA+ +
Sbjct: 195 PITMEDLISYSFQVARGMEFLSSR---KCIHRDLAARNILLSENNVVKICDFGLARDIYK 251
Query: 235 ESSYI---TTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRIPVDYSRPPE 290
Y+ TR+ ++APE + + +SDV+S+G+L+ E+ S G P Y
Sbjct: 252 NPDYVRKGDTRL--PLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSP--YPGVQM 307
Query: 291 EVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNAQKRPKMGHVVH 350
+ + L++ + R PE PE I + L C + ++RP+ +V
Sbjct: 308 DEDFCSRLREGMRMRAPEY----STPE---------IYQIMLDCWHRDPKERPRFAELVE 354
Query: 351 ML 352
L
Sbjct: 355 KL 356
Score = 32.7 bits (73), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 7/66 (10%)
Query: 106 VAVKNLLNNRGQAEREFKV---EVEAIGRV-RHKNLVRLLGYCA-EGAHRMLVYEYVNNG 160
VAVK L G E+K E++ + + H N+V LLG C +G M++ EY G
Sbjct: 60 VAVKML--KEGATASEYKALMTELKILTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKYG 117
Query: 161 NLEQWL 166
NL +L
Sbjct: 118 NLSNYL 123
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 83/174 (47%), Gaps = 13/174 (7%)
Query: 113 NNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGP 172
+ RG + E + EV + +V H N++ L +L+ E V+ G L +L
Sbjct: 53 SRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL----AQ 108
Query: 173 CSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNI-LIDKHW---NPKVSDFGL 228
L+ E + I G++YLH K+ H D+K NI L+DK+ + K+ DFGL
Sbjct: 109 KESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165
Query: 229 AKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIP 282
A + E + GT +VAPE + L +D++S G++ ++SG P
Sbjct: 166 AHEI--EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 89/186 (47%), Gaps = 14/186 (7%)
Query: 103 NSKVAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNN 159
KVA+K + L + + E+ + +RH ++++L ++V EY
Sbjct: 34 QQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYAG- 92
Query: 160 GNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHW 219
G L + + +T + + Y H K+VHRD+K N+L+D +
Sbjct: 93 GELFDY----IVEKKRMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNL 145
Query: 220 NPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGML-NERSDVYSFGILIMEVIS 278
N K++DFGL+ ++ ++ +++ T G+ Y APE + + DV+S GI++ ++
Sbjct: 146 NVKIADFGLSNIM-TDGNFLKTSC-GSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLV 203
Query: 279 GRIPVD 284
GR+P D
Sbjct: 204 GRLPFD 209
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 89/190 (46%), Gaps = 32/190 (16%)
Query: 106 VAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
VA+K L N+ A+R ++ E+ + V HKN++ LL + +L
Sbjct: 46 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNV------------FTPQKSL 92
Query: 163 EQWLH-------GDVGPCSPLTWEI---RMNIIL-GTAKGLSYLHEGLEPKVVHRDIKSS 211
E++ D C + E+ RM+ +L G+ +LH ++HRD+K S
Sbjct: 93 EEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPS 149
Query: 212 NILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGI 271
NI++ K+ DFGLA+ G +S++ T + T Y APE E D++S G
Sbjct: 150 NIVVKSDCTLKILDFGLARTAG--TSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGC 207
Query: 272 LIMEVISGRI 281
++ E++ +I
Sbjct: 208 IMGEMVCHKI 217
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 85/181 (46%), Gaps = 14/181 (7%)
Query: 105 KVAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
KVAVK L + A R ++ E+ + ++H+N++ LL E
Sbjct: 55 KVAVKKLSRPFQSLIHARRTYR-ELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTT 113
Query: 162 LEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
L ++ C L+ E ++ +GL Y+H ++HRD+K SN+ +++
Sbjct: 114 LMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDSEL 170
Query: 222 KVSDFGLAKLLGSE-SSYITTRVMGTFGYVAPEYASTGM-LNERSDVYSFGILIMEVISG 279
++ DFGLA+ E + Y+ TR Y APE M N+ D++S G ++ E++ G
Sbjct: 171 RILDFGLARQADEEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQG 225
Query: 280 R 280
+
Sbjct: 226 K 226
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 80/162 (49%), Gaps = 18/162 (11%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E+ + + H N+V+LL LV+E+++ +L+ ++ D + + + +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKDFM--DASALTGIPLPLIKSY 108
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVM 244
+ +GL++ H +V+HRD+K N+LI+ K++DFGLA+ G V+
Sbjct: 109 LFQLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 165
Query: 245 GTFGYVAPE------YASTGMLNERSDVYSFGILIMEVISGR 280
T Y APE Y ST + D++S G + E+++ R
Sbjct: 166 -TLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVTRR 201
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 91/185 (49%), Gaps = 22/185 (11%)
Query: 105 KVAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+VAVK L + A+R ++ E+ + ++H+N++ LL R L E N+
Sbjct: 49 RVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDVY 103
Query: 162 LEQWLHG----DVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK 217
L L G ++ LT + +I +GL Y+H ++HRD+K SN+ +++
Sbjct: 104 LVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNE 160
Query: 218 HWNPKVSDFGLAKLLGSE-SSYITTRVMGTFGYVAPEYASTGM-LNERSDVYSFGILIME 275
K+ DFGL + E + Y+ TR Y APE M N+ D++S G ++ E
Sbjct: 161 DSELKILDFGLCRHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAE 215
Query: 276 VISGR 280
+++GR
Sbjct: 216 LLTGR 220
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 78/174 (44%), Gaps = 15/174 (8%)
Query: 114 NRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWL--HGDVG 171
N ++ F+ EV + + H N+V+L LV EY + G + +L HG +
Sbjct: 53 NSSSLQKLFR-EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMK 111
Query: 172 PCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKL 231
E R + Y H+ +VHRD+K+ N+L+D N K++DFG +
Sbjct: 112 -----EKEARAKF-RQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNE 162
Query: 232 LGSESSYITTRVMGTFGYVAPE-YASTGMLNERSDVYSFGILIMEVISGRIPVD 284
+ T G+ Y APE + DV+S G+++ ++SG +P D
Sbjct: 163 FTFGNKLDT--FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 78/174 (44%), Gaps = 15/174 (8%)
Query: 114 NRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWL--HGDVG 171
N ++ F+ EV + + H N+V+L LV EY + G + +L HG +
Sbjct: 53 NSSSLQKLFR-EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMK 111
Query: 172 PCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKL 231
E R + Y H+ +VHRD+K+ N+L+D N K++DFG +
Sbjct: 112 -----EKEARAKF-RQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNE 162
Query: 232 LGSESSYITTRVMGTFGYVAPE-YASTGMLNERSDVYSFGILIMEVISGRIPVD 284
+ T G+ Y APE + DV+S G+++ ++SG +P D
Sbjct: 163 FTFGNKLDT--FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 78/174 (44%), Gaps = 15/174 (8%)
Query: 114 NRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWL--HGDVG 171
N ++ F+ EV + + H N+V+L LV EY + G + +L HG +
Sbjct: 53 NSSSLQKLFR-EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMK 111
Query: 172 PCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKL 231
E R + Y H+ +VHRD+K+ N+L+D N K++DFG +
Sbjct: 112 -----EKEARAKF-RQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNE 162
Query: 232 LGSESSYITTRVMGTFGYVAPE-YASTGMLNERSDVYSFGILIMEVISGRIPVD 284
+ T G+ Y APE + DV+S G+++ ++SG +P D
Sbjct: 163 FTFGNKLDT--FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 86/189 (45%), Gaps = 18/189 (9%)
Query: 102 DNSKVAVKNLLNNRGQAERE-----FKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEY 156
D K+ +N + ER FK E++ + + H LV L + +V +
Sbjct: 38 DTKKMYAMKYMNKQKCVERNEVRNVFK-ELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDL 96
Query: 157 VNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILID 216
+ G+L L +V E I L YL +++HRD+K NIL+D
Sbjct: 97 LLGGDLRYHLQQNVH----FKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLD 149
Query: 217 KHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYAST---GMLNERSDVYSFGILI 273
+H + ++DF +A +L E+ ITT + GT Y+APE S+ + D +S G+
Sbjct: 150 EHGHVHITDFNIAAMLPRETQ-ITT-MAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTA 207
Query: 274 MEVISGRIP 282
E++ GR P
Sbjct: 208 YELLRGRRP 216
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 80/162 (49%), Gaps = 18/162 (11%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E+ + + H N+V+LL LV+E+++ +L+ ++ D + + + +
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKTFM--DASALTGIPLPLIKSY 111
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVM 244
+ +GL++ H +V+HRD+K N+LI+ K++DFGLA+ G V+
Sbjct: 112 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 168
Query: 245 GTFGYVAPE------YASTGMLNERSDVYSFGILIMEVISGR 280
T Y APE Y ST + D++S G + E+++ R
Sbjct: 169 -TLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVTRR 204
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 89/190 (46%), Gaps = 32/190 (16%)
Query: 106 VAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
VA+K L N+ A+R ++ E+ + V HKN++ LL + +L
Sbjct: 57 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNV------------FTPQKSL 103
Query: 163 EQWLH-------GDVGPCSPLTWEI---RMNIIL-GTAKGLSYLHEGLEPKVVHRDIKSS 211
E++ D C + E+ RM+ +L G+ +LH ++HRD+K S
Sbjct: 104 EEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPS 160
Query: 212 NILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGI 271
NI++ K+ DFGLA+ G +S++ T + T Y APE E D++S G
Sbjct: 161 NIVVKSDCTLKILDFGLARTAG--TSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGC 218
Query: 272 LIMEVISGRI 281
++ E++ +I
Sbjct: 219 IMGEMVCHKI 228
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 81/162 (50%), Gaps = 18/162 (11%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E+ + + H N+V+LL LV+E+++ +L++++ D + + + +
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKKFM--DASALTGIPLPLIKSY 111
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVM 244
+ +GL++ H +V+HRD+K N+LI+ K++DFGLA+ G V+
Sbjct: 112 LFQLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 168
Query: 245 GTFGYVAPE------YASTGMLNERSDVYSFGILIMEVISGR 280
T Y APE Y ST + D++S G + E+++ R
Sbjct: 169 -TLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVTRR 204
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 83/174 (47%), Gaps = 13/174 (7%)
Query: 113 NNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGP 172
+ RG + E + EV + +V H N++ L +L+ E V+ G L +L
Sbjct: 53 SRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL----AQ 108
Query: 173 CSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNI-LIDKHW---NPKVSDFGL 228
L+ E + I G++YLH K+ H D+K NI L+DK+ + K+ DFGL
Sbjct: 109 KESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165
Query: 229 AKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIP 282
A + E + GT +VAPE + L +D++S G++ ++SG P
Sbjct: 166 AHEI--EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 81/162 (50%), Gaps = 18/162 (11%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E+ + + H N+V+LL LV+E+++ +L++++ D + + + +
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKKFM--DASALTGIPLPLIKSY 109
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVM 244
+ +GL++ H +V+HRD+K N+LI+ K++DFGLA+ G V+
Sbjct: 110 LFQLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 166
Query: 245 GTFGYVAPE------YASTGMLNERSDVYSFGILIMEVISGR 280
T Y APE Y ST + D++S G + E+++ R
Sbjct: 167 -TLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVTRR 202
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 83/174 (47%), Gaps = 13/174 (7%)
Query: 113 NNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGP 172
+ RG + E + EV + +V H N++ L +L+ E V+ G L +L
Sbjct: 53 SRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL----AQ 108
Query: 173 CSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNI-LIDKHW---NPKVSDFGL 228
L+ E + I G++YLH K+ H D+K NI L+DK+ + K+ DFGL
Sbjct: 109 KESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165
Query: 229 AKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIP 282
A + E + GT +VAPE + L +D++S G++ ++SG P
Sbjct: 166 AHEI--EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 92/182 (50%), Gaps = 17/182 (9%)
Query: 105 KVAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYE-YVNNG 160
KVA+K L + A+R ++ E+ + ++H+N++ LL + Y+ Y+
Sbjct: 69 KVAIKKLSRPFQSEIFAKRAYR-ELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMP 127
Query: 161 NLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWN 220
++ L +G + E ++ KGL Y+H VVHRD+K N+ +++
Sbjct: 128 FMQTDLQKIMG--MEFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCE 182
Query: 221 PKVSDFGLAKLLGSE-SSYITTRVMGTFGYVAPEYASTGM-LNERSDVYSFGILIMEVIS 278
K+ DFGLA+ +E + Y+ TR Y APE + M N+ D++S G ++ E+++
Sbjct: 183 LKILDFGLARHADAEMTGYVVTR-----WYRAPEVILSWMHYNQTVDIWSVGCIMAEMLT 237
Query: 279 GR 280
G+
Sbjct: 238 GK 239
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 83/174 (47%), Gaps = 13/174 (7%)
Query: 113 NNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGP 172
+ RG + E + EV + +V H N++ L +L+ E V+ G L +L
Sbjct: 53 SRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL----AQ 108
Query: 173 CSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNI-LIDKHW---NPKVSDFGL 228
L+ E + I G++YLH K+ H D+K NI L+DK+ + K+ DFGL
Sbjct: 109 KESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165
Query: 229 AKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIP 282
A + E + GT +VAPE + L +D++S G++ ++SG P
Sbjct: 166 AHEI--EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 83/174 (47%), Gaps = 13/174 (7%)
Query: 113 NNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGP 172
+ RG + E + EV + +V H N++ L +L+ E V+ G L +L
Sbjct: 53 SRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL----AQ 108
Query: 173 CSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNI-LIDKHW---NPKVSDFGL 228
L+ E + I G++YLH K+ H D+K NI L+DK+ + K+ DFGL
Sbjct: 109 KESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165
Query: 229 AKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIP 282
A + E + GT +VAPE + L +D++S G++ ++SG P
Sbjct: 166 AHEI--EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 88/210 (41%), Gaps = 24/210 (11%)
Query: 124 VEVEAIGRVRHKNLVRLLGYCAEGAHRML-VYEYVNNGNLEQWLHGDVGPCSPLTWEIRM 182
E + R+ + L C + R+ V E+VN G+L + S E R
Sbjct: 72 TEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQK-----SRRFDEARA 126
Query: 183 NIILG-TAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITT 241
L +LH+ +++RD+K N+L+D + K++DFG+ K G + T
Sbjct: 127 RFYAAEIISALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCK-EGICNGVTTA 182
Query: 242 RVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVDYSRPP--------EEVN 293
GT Y+APE + D ++ G+L+ E++ G P + +EV
Sbjct: 183 TFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVV 242
Query: 294 LIEWLKKMVTNRNPEGVLDPKLPEKPTSRL 323
WL + T G+L + + PT RL
Sbjct: 243 YPTWLHEDAT-----GILKSFMTKNPTMRL 267
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 82/174 (47%), Gaps = 13/174 (7%)
Query: 113 NNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGP 172
+ RG E + EV + +V H N++ L +L+ E V+ G L +L
Sbjct: 53 SRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFL----AQ 108
Query: 173 CSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNI-LIDKHW---NPKVSDFGL 228
L+ E + I G++YLH K+ H D+K NI L+DK+ + K+ DFGL
Sbjct: 109 KESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165
Query: 229 AKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIP 282
A + E + GT +VAPE + L +D++S G++ ++SG P
Sbjct: 166 AHEI--EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 80/162 (49%), Gaps = 18/162 (11%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E+ + + H N+V+LL LV+E+++ +L+ ++ D + + + +
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFM--DASALTGIPLPLIKSY 111
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVM 244
+ +GL++ H +V+HRD+K N+LI+ K++DFGLA+ G V+
Sbjct: 112 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 168
Query: 245 GTFGYVAPE------YASTGMLNERSDVYSFGILIMEVISGR 280
T Y APE Y ST + D++S G + E+++ R
Sbjct: 169 -TLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVTRR 204
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 90/186 (48%), Gaps = 24/186 (12%)
Query: 106 VAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCA------EGAHRMLVYEY 156
VAVK L N+ A+R ++ E+ + V HKN++ LL E LV E
Sbjct: 52 VAVKKLSRPFQNQTHAKRAYR-ELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 110
Query: 157 VNNGNLEQWLHGDVGPCSPLTWEIRMNIIL-GTAKGLSYLHEGLEPKVVHRDIKSSNILI 215
++ NL Q +H ++ RM+ +L G+ +LH ++HRD+K SNI++
Sbjct: 111 MD-ANLCQVIHMELD-------HERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVV 159
Query: 216 DKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIME 275
K+ DFGLA+ + ++++ T + T Y APE D++S G ++ E
Sbjct: 160 KSDCTLKILDFGLAR--TACTNFMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGE 217
Query: 276 VISGRI 281
++ G +
Sbjct: 218 LVKGCV 223
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 80/162 (49%), Gaps = 18/162 (11%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E+ + + H N+V+LL LV+E+++ +L+ ++ D + + + +
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFM--DASALTGIPLPLIKSY 110
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVM 244
+ +GL++ H +V+HRD+K N+LI+ K++DFGLA+ G V+
Sbjct: 111 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 167
Query: 245 GTFGYVAPE------YASTGMLNERSDVYSFGILIMEVISGR 280
T Y APE Y ST + D++S G + E+++ R
Sbjct: 168 -TLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVTRR 203
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 83/186 (44%), Gaps = 28/186 (15%)
Query: 106 VAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
VAVK L + ++ +A +F EV A+ + H+NL+RL G +M V E G+L
Sbjct: 39 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSL 97
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGT--------AKGLSYLHEGLEPKVVHRDIKSSNIL 214
L G + +LGT A+G+ YL + +HRD+ + N+L
Sbjct: 98 LDRLRKHQG-----------HFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLL 143
Query: 215 IDKHWNPKVSDFGLAKLLGSESSYITTRVMGT--FGYVAPEYASTGMLNERSDVYSFGIL 272
+ K+ DFGL + L + + F + APE T + SD + FG+
Sbjct: 144 LATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVT 203
Query: 273 IMEVIS 278
+ E+ +
Sbjct: 204 LWEMFT 209
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 88/204 (43%), Gaps = 13/204 (6%)
Query: 124 VEVEAIGRVRHKNLVRLLGYCAEGAHRM-LVYEYVNNGNLEQWLHGDVGPCSPLTWEIRM 182
E + RH L L Y + R+ V EY N G L + H + T E
Sbjct: 57 TESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGEL--FFH--LSRERVFTEERAR 111
Query: 183 NIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTR 242
L YLH VV+RDIK N+++DK + K++DFGL K S+ + + T
Sbjct: 112 FYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT- 167
Query: 243 VMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPV---DYSRPPEEVNLIEWLK 299
GT Y+APE D + G+++ E++ GR+P D+ R E + + E
Sbjct: 168 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF 227
Query: 300 KMVTNRNPEGVLDPKLPEKPTSRL 323
+ + +L L + P RL
Sbjct: 228 PRTLSPEAKSLLAGLLKKDPKQRL 251
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 14/163 (8%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWL--HGDVGPCSPLTWEIRM 182
EV + + H N+V+L L+ EY + G + +L HG + + + R
Sbjct: 61 EVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARS-KFRQ 119
Query: 183 NIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTR 242
+ Y H+ ++VHRD+K+ N+L+D N K++DFG + T
Sbjct: 120 -----IVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDT-- 169
Query: 243 VMGTFGYVAPE-YASTGMLNERSDVYSFGILIMEVISGRIPVD 284
G+ Y APE + DV+S G+++ ++SG +P D
Sbjct: 170 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 212
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 82/187 (43%), Gaps = 21/187 (11%)
Query: 106 VAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQW 165
V V ++ G + + K E ++H ++V LL + +V+E+++ +L
Sbjct: 57 VDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADL--- 113
Query: 166 LHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEP-------KVVHRDIKSSNILIDKH 218
C + + A Y+ + LE ++HRD+K N+L+
Sbjct: 114 -------CFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPENVLLASK 166
Query: 219 WNP---KVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIME 275
N K+ DFG+A LG ES + +GT ++APE + DV+ G+++
Sbjct: 167 ENSAPVKLGDFGVAIQLG-ESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFI 225
Query: 276 VISGRIP 282
++SG +P
Sbjct: 226 LLSGCLP 232
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 191 GLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYV 250
L YLH E VV+RD+K N+++DK + K++DFGL K G + GT Y+
Sbjct: 263 ALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKTFCGTPEYL 319
Query: 251 APEYASTGMLNERSDVYSFGILIMEVISGRIPV 283
APE D + G+++ E++ GR+P
Sbjct: 320 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 352
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 85/186 (45%), Gaps = 28/186 (15%)
Query: 106 VAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
VAVK L + ++ +A +F EV A+ + H+NL+RL G +M V E G+L
Sbjct: 39 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSL 97
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGT--------AKGLSYLHEGLEPKVVHRDIKSSNIL 214
L G + +LGT A+G+ YL + +HRD+ + N+L
Sbjct: 98 LDRLRKHQG-----------HFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLL 143
Query: 215 IDKHWNPKVSDFGLAKLL-GSESSYITTRVMGT-FGYVAPEYASTGMLNERSDVYSFGIL 272
+ K+ DFGL + L ++ Y+ F + APE T + SD + FG+
Sbjct: 144 LATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVT 203
Query: 273 IMEVIS 278
+ E+ +
Sbjct: 204 LWEMFT 209
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 85/186 (45%), Gaps = 28/186 (15%)
Query: 106 VAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
VAVK L + ++ +A +F EV A+ + H+NL+RL G +M V E G+L
Sbjct: 43 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSL 101
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGT--------AKGLSYLHEGLEPKVVHRDIKSSNIL 214
L G + +LGT A+G+ YL + +HRD+ + N+L
Sbjct: 102 LDRLRKHQG-----------HFLLGTLSRYAVQVAEGMGYLES---KRFIHRDLAARNLL 147
Query: 215 IDKHWNPKVSDFGLAKLL-GSESSYITTRVMGT-FGYVAPEYASTGMLNERSDVYSFGIL 272
+ K+ DFGL + L ++ Y+ F + APE T + SD + FG+
Sbjct: 148 LATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVT 207
Query: 273 IMEVIS 278
+ E+ +
Sbjct: 208 LWEMFT 213
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 191 GLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYV 250
L YLH E VV+RD+K N+++DK + K++DFGL K G + GT Y+
Sbjct: 260 ALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKTFCGTPEYL 316
Query: 251 APEYASTGMLNERSDVYSFGILIMEVISGRIPV 283
APE D + G+++ E++ GR+P
Sbjct: 317 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 349
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 88/204 (43%), Gaps = 13/204 (6%)
Query: 124 VEVEAIGRVRHKNLVRLLGYCAEGAHRM-LVYEYVNNGNLEQWLHGDVGPCSPLTWEIRM 182
E + RH L L Y + R+ V EY N G L + H + T E
Sbjct: 54 TESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGEL--FFH--LSRERVFTEERAR 108
Query: 183 NIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTR 242
L YLH VV+RDIK N+++DK + K++DFGL K S+ + + T
Sbjct: 109 FYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT- 164
Query: 243 VMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPV---DYSRPPEEVNLIEWLK 299
GT Y+APE D + G+++ E++ GR+P D+ R E + + E
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF 224
Query: 300 KMVTNRNPEGVLDPKLPEKPTSRL 323
+ + +L L + P RL
Sbjct: 225 PRTLSPEAKSLLAGLLKKDPKQRL 248
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 83/186 (44%), Gaps = 28/186 (15%)
Query: 106 VAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
VAVK L + ++ +A +F EV A+ + H+NL+RL G +M V E G+L
Sbjct: 49 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSL 107
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGT--------AKGLSYLHEGLEPKVVHRDIKSSNIL 214
L G + +LGT A+G+ YL + +HRD+ + N+L
Sbjct: 108 LDRLRKHQG-----------HFLLGTLSRYAVQVAEGMGYLES---KRFIHRDLAARNLL 153
Query: 215 IDKHWNPKVSDFGLAKLLGSESSYITTRVMGT--FGYVAPEYASTGMLNERSDVYSFGIL 272
+ K+ DFGL + L + + F + APE T + SD + FG+
Sbjct: 154 LATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVT 213
Query: 273 IMEVIS 278
+ E+ +
Sbjct: 214 LWEMFT 219
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 88/203 (43%), Gaps = 13/203 (6%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRM-LVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMN 183
E + RH L L Y + R+ V EY N G L + H + T E
Sbjct: 55 ESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGEL--FFH--LSRERVFTEERARF 109
Query: 184 IILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRV 243
L YLH VV+RDIK N+++DK + K++DFGL K S+ + + T
Sbjct: 110 YGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-F 165
Query: 244 MGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPV---DYSRPPEEVNLIEWLKK 300
GT Y+APE D + G+++ E++ GR+P D+ R E + + E
Sbjct: 166 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP 225
Query: 301 MVTNRNPEGVLDPKLPEKPTSRL 323
+ + +L L + P RL
Sbjct: 226 RTLSPEAKSLLAGLLKKDPKQRL 248
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 85/186 (45%), Gaps = 28/186 (15%)
Query: 106 VAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
VAVK L + ++ +A +F EV A+ + H+NL+RL G +M V E G+L
Sbjct: 39 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSL 97
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGT--------AKGLSYLHEGLEPKVVHRDIKSSNIL 214
L G + +LGT A+G+ YL + +HRD+ + N+L
Sbjct: 98 LDRLRKHQG-----------HFLLGTLSRYAVQVAEGMGYLES---KRFIHRDLAARNLL 143
Query: 215 IDKHWNPKVSDFGLAKLL-GSESSYITTRVMGT-FGYVAPEYASTGMLNERSDVYSFGIL 272
+ K+ DFGL + L ++ Y+ F + APE T + SD + FG+
Sbjct: 144 LATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVT 203
Query: 273 IMEVIS 278
+ E+ +
Sbjct: 204 LWEMFT 209
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 68/142 (47%), Gaps = 9/142 (6%)
Query: 144 CAEGAHRML-VYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPK 202
C + R+ V EYVN G+L + L E + L+YLHE
Sbjct: 89 CFQTESRLFFVIEYVNGGDLMFHMQRQ----RKLPEEHARFYSAEISLALNYLHE---RG 141
Query: 203 VVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNE 262
+++RD+K N+L+D + K++D+G+ K G T+ GT Y+APE
Sbjct: 142 IIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSXFCGTPNYIAPEILRGEDYGF 200
Query: 263 RSDVYSFGILIMEVISGRIPVD 284
D ++ G+L+ E+++GR P D
Sbjct: 201 SVDWWALGVLMFEMMAGRSPFD 222
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 78/178 (43%), Gaps = 23/178 (12%)
Query: 114 NRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWL--HGDVG 171
N ++ F+ EV + + H N+V+L LV EY + G + +L HG
Sbjct: 46 NSSSLQKLFR-EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG--- 101
Query: 172 PCSPLTW----EIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFG 227
W E R + Y H+ +VHRD+K+ N+L+D N K++DFG
Sbjct: 102 ------WMKEKEARAKF-RQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFG 151
Query: 228 LAKLLGSESSYITTRVMGTFGYVAPE-YASTGMLNERSDVYSFGILIMEVISGRIPVD 284
+ + T G+ Y APE + DV+S G+++ ++SG +P D
Sbjct: 152 FSNEFTFGNKLDT--FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 207
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 77/174 (44%), Gaps = 15/174 (8%)
Query: 114 NRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWL--HGDVG 171
N ++ F+ EV + + H N+V+L LV EY + G + +L HG +
Sbjct: 53 NSSSLQKLFR-EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMK 111
Query: 172 PCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKL 231
E R + Y H+ +VHRD+K+ N+L+D N K++DFG +
Sbjct: 112 -----EKEARAKF-RQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNE 162
Query: 232 LGSESSYITTRVMGTFGYVAPE-YASTGMLNERSDVYSFGILIMEVISGRIPVD 284
+ G+ Y APE + DV+S G+++ ++SG +P D
Sbjct: 163 FTFGNK--LDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 83/186 (44%), Gaps = 28/186 (15%)
Query: 106 VAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
VAVK L + ++ +A +F EV A+ + H+NL+RL G +M V E G+L
Sbjct: 49 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSL 107
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGT--------AKGLSYLHEGLEPKVVHRDIKSSNIL 214
L G + +LGT A+G+ YL + +HRD+ + N+L
Sbjct: 108 LDRLRKHQG-----------HFLLGTLSRYAVQVAEGMGYLES---KRFIHRDLAARNLL 153
Query: 215 IDKHWNPKVSDFGLAKLLGSESSYITTRVMGT--FGYVAPEYASTGMLNERSDVYSFGIL 272
+ K+ DFGL + L + + F + APE T + SD + FG+
Sbjct: 154 LATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVT 213
Query: 273 IMEVIS 278
+ E+ +
Sbjct: 214 LWEMFT 219
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 85/186 (45%), Gaps = 28/186 (15%)
Query: 106 VAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
VAVK L + ++ +A +F EV A+ + H+NL+RL G +M V E G+L
Sbjct: 43 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSL 101
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGT--------AKGLSYLHEGLEPKVVHRDIKSSNIL 214
L G + +LGT A+G+ YL + +HRD+ + N+L
Sbjct: 102 LDRLRKHQG-----------HFLLGTLSRYAVQVAEGMGYLES---KRFIHRDLAARNLL 147
Query: 215 IDKHWNPKVSDFGLAKLL-GSESSYITTRVMGT-FGYVAPEYASTGMLNERSDVYSFGIL 272
+ K+ DFGL + L ++ Y+ F + APE T + SD + FG+
Sbjct: 148 LATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVT 207
Query: 273 IMEVIS 278
+ E+ +
Sbjct: 208 LWEMFT 213
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 80/174 (45%), Gaps = 10/174 (5%)
Query: 106 VAVKNLLNNRGQAERE-FKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K N + RE F E + + H ++V+L+G E ++ E G L
Sbjct: 41 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRS 99
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPK-VVHRDIKSSNILIDKHWNPKV 223
+L + + + ++ A LS LE K VHRDI + N+L+ + K+
Sbjct: 100 FLQVR-------KYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKL 152
Query: 224 SDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVI 277
DFGL++ + + Y ++ ++APE + SDV+ FG+ + E++
Sbjct: 153 GDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 74/169 (43%), Gaps = 26/169 (15%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWL--HGDVGPCSPLTWEIRM 182
EV + + H N+V+L LV EY + G + +L HG RM
Sbjct: 64 EVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG------------RM 111
Query: 183 NIILGTAK------GLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSES 236
AK + Y H+ +VHRD+K+ N+L+D N K++DFG + +
Sbjct: 112 KEKEARAKFRQIVSAVQYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGN 168
Query: 237 SYITTRVMGTFGYVAPE-YASTGMLNERSDVYSFGILIMEVISGRIPVD 284
T G+ Y APE + DV+S G+++ ++SG +P D
Sbjct: 169 KLDT--FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 68/142 (47%), Gaps = 9/142 (6%)
Query: 144 CAEGAHRML-VYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPK 202
C + R+ V EYVN G+L + L E + L+YLHE
Sbjct: 74 CFQTESRLFFVIEYVNGGDLMFHMQRQ----RKLPEEHARFYSAEISLALNYLHER---G 126
Query: 203 VVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNE 262
+++RD+K N+L+D + K++D+G+ K G T+ GT Y+APE
Sbjct: 127 IIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSXFCGTPNYIAPEILRGEDYGF 185
Query: 263 RSDVYSFGILIMEVISGRIPVD 284
D ++ G+L+ E+++GR P D
Sbjct: 186 SVDWWALGVLMFEMMAGRSPFD 207
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 68/142 (47%), Gaps = 9/142 (6%)
Query: 144 CAEGAHRML-VYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPK 202
C + R+ V EYVN G+L + L E + L+YLHE
Sbjct: 78 CFQTESRLFFVIEYVNGGDLMFHMQRQ----RKLPEEHARFYSAEISLALNYLHER---G 130
Query: 203 VVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNE 262
+++RD+K N+L+D + K++D+G+ K G T+ GT Y+APE
Sbjct: 131 IIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSXFCGTPNYIAPEILRGEDYGF 189
Query: 263 RSDVYSFGILIMEVISGRIPVD 284
D ++ G+L+ E+++GR P D
Sbjct: 190 SVDWWALGVLMFEMMAGRSPFD 211
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 80/174 (45%), Gaps = 10/174 (5%)
Query: 106 VAVKNLLNNRGQAERE-FKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K N + RE F E + + H ++V+L+G E ++ E G L
Sbjct: 43 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRS 101
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPK-VVHRDIKSSNILIDKHWNPKV 223
+L + + + ++ A LS LE K VHRDI + N+L+ + K+
Sbjct: 102 FLQVR-------KYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKL 154
Query: 224 SDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVI 277
DFGL++ + + Y ++ ++APE + SDV+ FG+ + E++
Sbjct: 155 GDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 208
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 80/174 (45%), Gaps = 10/174 (5%)
Query: 106 VAVKNLLNNRGQAERE-FKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K N + RE F E + + H ++V+L+G E ++ E G L
Sbjct: 69 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRS 127
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPK-VVHRDIKSSNILIDKHWNPKV 223
+L + + + ++ A LS LE K VHRDI + N+L+ + K+
Sbjct: 128 FLQVR-------KYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKL 180
Query: 224 SDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVI 277
DFGL++ + + Y ++ ++APE + SDV+ FG+ + E++
Sbjct: 181 GDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 234
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 80/174 (45%), Gaps = 10/174 (5%)
Query: 106 VAVKNLLNNRGQAERE-FKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K N + RE F E + + H ++V+L+G E ++ E G L
Sbjct: 41 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRS 99
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPK-VVHRDIKSSNILIDKHWNPKV 223
+L + + + ++ A LS LE K VHRDI + N+L+ + K+
Sbjct: 100 FLQVR-------KYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKL 152
Query: 224 SDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVI 277
DFGL++ + + Y ++ ++APE + SDV+ FG+ + E++
Sbjct: 153 GDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 80/174 (45%), Gaps = 10/174 (5%)
Query: 106 VAVKNLLNNRGQAERE-FKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K N + RE F E + + H ++V+L+G E ++ E G L
Sbjct: 38 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRS 96
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPK-VVHRDIKSSNILIDKHWNPKV 223
+L + + + ++ A LS LE K VHRDI + N+L+ + K+
Sbjct: 97 FLQVR-------KYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKL 149
Query: 224 SDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVI 277
DFGL++ + + Y ++ ++APE + SDV+ FG+ + E++
Sbjct: 150 GDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 203
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 68/142 (47%), Gaps = 9/142 (6%)
Query: 144 CAEGAHRML-VYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPK 202
C + R+ V EYVN G+L + L E + L+YLHE
Sbjct: 121 CFQTESRLFFVIEYVNGGDLMFHMQRQ----RKLPEEHARFYSAEISLALNYLHE---RG 173
Query: 203 VVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNE 262
+++RD+K N+L+D + K++D+G+ K G T+ GT Y+APE
Sbjct: 174 IIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSTFCGTPNYIAPEILRGEDYGF 232
Query: 263 RSDVYSFGILIMEVISGRIPVD 284
D ++ G+L+ E+++GR P D
Sbjct: 233 SVDWWALGVLMFEMMAGRSPFD 254
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 80/174 (45%), Gaps = 10/174 (5%)
Query: 106 VAVKNLLNNRGQAERE-FKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K N + RE F E + + H ++V+L+G E ++ E G L
Sbjct: 44 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRS 102
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPK-VVHRDIKSSNILIDKHWNPKV 223
+L + + + ++ A LS LE K VHRDI + N+L+ + K+
Sbjct: 103 FLQVR-------KYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKL 155
Query: 224 SDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVI 277
DFGL++ + + Y ++ ++APE + SDV+ FG+ + E++
Sbjct: 156 GDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 209
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 70/137 (51%), Gaps = 8/137 (5%)
Query: 191 GLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYV 250
L YLH E VV+RD+K N+++DK + K++DFGL K G + GT Y+
Sbjct: 120 ALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKXFCGTPEYL 176
Query: 251 APEYASTGMLNERSDVYSFGILIMEVISGRIPVDYSRPPEEVNLIEWLKKMVTNRN--PE 308
APE D + G+++ E++ GR+P Y++ E++ + ++++ R PE
Sbjct: 177 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-YNQDHEKLFELILMEEIRFPRTLGPE 235
Query: 309 G--VLDPKLPEKPTSRL 323
+L L + P RL
Sbjct: 236 AKSLLSGLLKKDPKQRL 252
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 70/137 (51%), Gaps = 8/137 (5%)
Query: 191 GLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYV 250
L YLH E VV+RD+K N+++DK + K++DFGL K G + GT Y+
Sbjct: 121 ALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKXFCGTPEYL 177
Query: 251 APEYASTGMLNERSDVYSFGILIMEVISGRIPVDYSRPPEEVNLIEWLKKMVTNRN--PE 308
APE D + G+++ E++ GR+P Y++ E++ + ++++ R PE
Sbjct: 178 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-YNQDHEKLFELILMEEIRFPRTLGPE 236
Query: 309 G--VLDPKLPEKPTSRL 323
+L L + P RL
Sbjct: 237 AKSLLSGLLKKDPKQRL 253
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 76/173 (43%), Gaps = 34/173 (19%)
Query: 132 VRHKNLVRLL----GYCAEG-AHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIIL 186
+ H N+ R + A+G +LV EY NG+L ++L W +
Sbjct: 64 MEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS-----DWVSSCRLAH 118
Query: 187 GTAKGLSYLHEGL------EPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLL-------- 232
+GL+YLH L +P + HRD+ S N+L+ +SDFGL+ L
Sbjct: 119 SVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRP 178
Query: 233 GSESSYITTRVMGTFGYVAPEYASTGMLNERS--------DVYSFGILIMEVI 277
G E + + V GT Y+APE G +N R D+Y+ G++ E+
Sbjct: 179 GEEDNAAISEV-GTIRYMAPEVLE-GAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 80/174 (45%), Gaps = 10/174 (5%)
Query: 106 VAVKNLLNNRGQAERE-FKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K N + RE F E + + H ++V+L+G E ++ E G L
Sbjct: 46 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRS 104
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPK-VVHRDIKSSNILIDKHWNPKV 223
+L + + + ++ A LS LE K VHRDI + N+L+ + K+
Sbjct: 105 FLQVR-------KYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKL 157
Query: 224 SDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVI 277
DFGL++ + + Y ++ ++APE + SDV+ FG+ + E++
Sbjct: 158 GDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 211
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 79/169 (46%), Gaps = 22/169 (13%)
Query: 179 EIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSY 238
+I I + K L +LH L V+HRD+K SN+LI+ K+ DFG++ L + +
Sbjct: 109 DILGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAK 166
Query: 239 ITTRVMGTFGYVAPEYASTGM----LNERSDVYSFGILIMEVISGRIPVDYSRPPEEVNL 294
G Y+APE + + + +SD++S GI ++E+ R P D P
Sbjct: 167 DIDA--GCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP----- 219
Query: 295 IEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNAQKRP 343
+ LK++V + P+ P + + +C+ N+++RP
Sbjct: 220 FQQLKQVVEEPS---------PQLPADKFSAEFVDFTSQCLKKNSKERP 259
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 191 GLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYV 250
L YLH E VV+RD+K N+++DK + K++DFGL K G + GT Y+
Sbjct: 122 ALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKXFCGTPEYL 178
Query: 251 APEYASTGMLNERSDVYSFGILIMEVISGRIPV 283
APE D + G+++ E++ GR+P
Sbjct: 179 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 211
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 80/174 (45%), Gaps = 10/174 (5%)
Query: 106 VAVKNLLNNRGQAERE-FKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K N + RE F E + + H ++V+L+G E ++ E G L
Sbjct: 421 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRS 479
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPK-VVHRDIKSSNILIDKHWNPKV 223
+L + + + ++ A LS LE K VHRDI + N+L+ + K+
Sbjct: 480 FLQVR-------KFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKL 532
Query: 224 SDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVI 277
DFGL++ + + Y ++ ++APE + SDV+ FG+ + E++
Sbjct: 533 GDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 83/184 (45%), Gaps = 18/184 (9%)
Query: 105 KVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL-- 162
KV K ++ + K E + V+H +V L+ G L+ EY++ G L
Sbjct: 51 KVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFM 110
Query: 163 ---EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHW 219
+ + + C L EI M L +LH+ +++RD+K NI+++
Sbjct: 111 QLEREGIFMEDTACFYLA-EISM--------ALGHLHQ---KGIIYRDLKPENIMLNHQG 158
Query: 220 NPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISG 279
+ K++DFGL K + + +T GT Y+APE N D +S G L+ ++++G
Sbjct: 159 HVKLTDFGLCKESIHDGT-VTHXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
Query: 280 RIPV 283
P
Sbjct: 218 APPF 221
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 83/184 (45%), Gaps = 18/184 (9%)
Query: 105 KVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL-- 162
KV K ++ + K E + V+H +V L+ G L+ EY++ G L
Sbjct: 51 KVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFM 110
Query: 163 ---EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHW 219
+ + + C L EI M L +LH+ +++RD+K NI+++
Sbjct: 111 QLEREGIFMEDTACFYLA-EISM--------ALGHLHQ---KGIIYRDLKPENIMLNHQG 158
Query: 220 NPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISG 279
+ K++DFGL K + + +T GT Y+APE N D +S G L+ ++++G
Sbjct: 159 HVKLTDFGLCKESIHDGT-VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
Query: 280 RIPV 283
P
Sbjct: 218 APPF 221
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 77/168 (45%), Gaps = 24/168 (14%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWL--HGDVGPCSPLTWEIRM 182
EV + + H N+V+L L+ EY + G + +L HG + + + R
Sbjct: 64 EVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARS-KFRQ 122
Query: 183 NIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTR 242
+ Y H+ ++VHRD+K+ N+L+D N K++DFG S + +
Sbjct: 123 -----IVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGF-----SNEFTVGGK 169
Query: 243 VMGTFGYVAPEYASTGMLNERS------DVYSFGILIMEVISGRIPVD 284
+ G AP YA+ + + DV+S G+++ ++SG +P D
Sbjct: 170 LDAFCG--APPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 79/179 (44%), Gaps = 25/179 (13%)
Query: 114 NRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWL--HGDVG 171
N ++ F+ EV + + H N+V+L LV EY + G + +L HG +
Sbjct: 53 NSSSLQKLFR-EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMK 111
Query: 172 PCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKL 231
E R + Y H+ +VHRD+K+ N+L+D N K++DFG
Sbjct: 112 -----EKEARAKF-RQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGF--- 159
Query: 232 LGSESSYITTRVMGTFGYVAPEYASTGMLNERS------DVYSFGILIMEVISGRIPVD 284
S ++ G AP YA+ + + DV+S G+++ ++SG +P D
Sbjct: 160 --SNEFTFGNKLDAFCG--APPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 82/182 (45%), Gaps = 9/182 (4%)
Query: 105 KVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
K+ K+LL Q E+ +E+ + H+++V G+ + +V E +L +
Sbjct: 48 KIVPKSLLLKPHQREK-MSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE 106
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
P I+LG YLH +V+HRD+K N+ +++ K+
Sbjct: 107 LHKRRKALTEPEARYYLRQIVLGC----QYLHRN---RVIHRDLKLGNLFLNEDLEVKIG 159
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVD 284
DFGLA + + T + GT Y+APE S + DV+S G ++ ++ G+ P +
Sbjct: 160 DFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 218
Query: 285 YS 286
S
Sbjct: 219 TS 220
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 104/249 (41%), Gaps = 25/249 (10%)
Query: 106 VAVKNLLNNRGQAERE-FKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VAVK + +E F E + + H ++V+L+G E ++ E G L
Sbjct: 39 VAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEP-TWIIMELYPYGELGH 97
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
+L + LT + L K ++YL VHRDI NIL+ K+
Sbjct: 98 YLERNKNSLKVLTLVLYS---LQICKAMAYLES---INCVHRDIAVRNILVASPECVKLG 151
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVD 284
DFGL++ + E Y + +++PE + SDV+ F + + E++S
Sbjct: 152 DFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILS------ 205
Query: 285 YSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVAL-RCVDPNAQKRP 343
+ + P WL+ N++ GVL+ K P L +L + RC D + RP
Sbjct: 206 FGKQP-----FFWLE----NKDVIGVLE-KGDRLPKPDLCPPVLYTLMTRCWDYDPSDRP 255
Query: 344 KMGHVVHML 352
+ +V L
Sbjct: 256 RFTELVCSL 264
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 82/182 (45%), Gaps = 9/182 (4%)
Query: 105 KVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
K+ K+LL Q E+ +E+ + H+++V G+ + +V E +L +
Sbjct: 52 KIVPKSLLLKPHQREK-MSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE 110
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
P I+LG YLH +V+HRD+K N+ +++ K+
Sbjct: 111 LHKRRKALTEPEARYYLRQIVLGC----QYLHRN---RVIHRDLKLGNLFLNEDLEVKIG 163
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVD 284
DFGLA + + T + GT Y+APE S + DV+S G ++ ++ G+ P +
Sbjct: 164 DFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 222
Query: 285 YS 286
S
Sbjct: 223 TS 224
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 104/249 (41%), Gaps = 25/249 (10%)
Query: 106 VAVKNLLNNRGQAERE-FKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VAVK + +E F E + + H ++V+L+G E ++ E G L
Sbjct: 55 VAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEP-TWIIMELYPYGELGH 113
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
+L + LT + L K ++YL VHRDI NIL+ K+
Sbjct: 114 YLERNKNSLKVLTLVLYS---LQICKAMAYLES---INCVHRDIAVRNILVASPECVKLG 167
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVD 284
DFGL++ + E Y + +++PE + SDV+ F + + E++S
Sbjct: 168 DFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILS------ 221
Query: 285 YSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVAL-RCVDPNAQKRP 343
+ + P WL+ N++ GVL+ K P L +L + RC D + RP
Sbjct: 222 FGKQP-----FFWLE----NKDVIGVLE-KGDRLPKPDLCPPVLYTLMTRCWDYDPSDRP 271
Query: 344 KMGHVVHML 352
+ +V L
Sbjct: 272 RFTELVCSL 280
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 82/182 (45%), Gaps = 9/182 (4%)
Query: 105 KVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
K+ K+LL Q E+ +E+ + H+++V G+ + +V E +L +
Sbjct: 48 KIVPKSLLLKPHQREK-MSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE 106
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
P I+LG YLH +V+HRD+K N+ +++ K+
Sbjct: 107 LHKRRKALTEPEARYYLRQIVLGC----QYLHRN---RVIHRDLKLGNLFLNEDLEVKIG 159
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVD 284
DFGLA + + T + GT Y+APE S + DV+S G ++ ++ G+ P +
Sbjct: 160 DFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 218
Query: 285 YS 286
S
Sbjct: 219 TS 220
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 11/152 (7%)
Query: 137 LVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLH 196
LV+L + ++ +V EYV G + L P I+L YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLH 158
Query: 197 EGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYAS 256
+++RD+K N+LID+ KV+DFG AK + T + GT Y+APE
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLCGTPEYLAPEIIL 211
Query: 257 TGMLNERSDVYSFGILIMEVISGRIPVDYSRP 288
+ N+ D ++ G+LI E+ +G P +P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 79/174 (45%), Gaps = 10/174 (5%)
Query: 106 VAVKNLLNNRGQAERE-FKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K N + RE F E + + H ++V+L+G E ++ E G L
Sbjct: 41 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRS 99
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPK-VVHRDIKSSNILIDKHWNPKV 223
+L + + + ++ A LS LE K VHRDI + N+L+ K+
Sbjct: 100 FLQVR-------KFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKL 152
Query: 224 SDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVI 277
DFGL++ + + Y ++ ++APE + SDV+ FG+ + E++
Sbjct: 153 GDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 88/190 (46%), Gaps = 32/190 (16%)
Query: 106 VAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
VA+K L N+ A+R ++ E+ + V HKN++ LL + +L
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNV------------FTPQKSL 98
Query: 163 EQWLH-------GDVGPCSPLTWEI---RMNIIL-GTAKGLSYLHEGLEPKVVHRDIKSS 211
E++ D C + E+ RM+ +L G+ +LH ++HRD+K S
Sbjct: 99 EEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPS 155
Query: 212 NILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGI 271
NI++ K+ DFGLA+ G +S++ + T Y APE E D++S G
Sbjct: 156 NIVVKSDCTLKILDFGLARTAG--TSFMMEPEVVTRYYRAPEVILGMGYKENVDIWSVGC 213
Query: 272 LIMEVISGRI 281
++ E++ +I
Sbjct: 214 IMGEMVCHKI 223
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 104/249 (41%), Gaps = 25/249 (10%)
Query: 106 VAVKNLLNNRGQAERE-FKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VAVK + +E F E + + H ++V+L+G E ++ E G L
Sbjct: 43 VAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEP-TWIIMELYPYGELGH 101
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
+L + LT + L K ++YL VHRDI NIL+ K+
Sbjct: 102 YLERNKNSLKVLTLVLYS---LQICKAMAYLES---INCVHRDIAVRNILVASPECVKLG 155
Query: 225 DFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVD 284
DFGL++ + E Y + +++PE + SDV+ F + + E++S
Sbjct: 156 DFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILS------ 209
Query: 285 YSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVAL-RCVDPNAQKRP 343
+ + P WL+ N++ GVL+ K P L +L + RC D + RP
Sbjct: 210 FGKQP-----FFWLE----NKDVIGVLE-KGDRLPKPDLCPPVLYTLMTRCWDYDPSDRP 259
Query: 344 KMGHVVHML 352
+ +V L
Sbjct: 260 RFTELVCSL 268
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 84/204 (41%), Gaps = 13/204 (6%)
Query: 124 VEVEAIGRVRHKNLVRLLGYCAEGAHRM-LVYEYVNNGNLEQWLHGDVGPCSPLTWEIRM 182
E + RH L L Y + R+ V EY N G L + H + T E
Sbjct: 54 TESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGEL--FFH--LSRERVFTEERAR 108
Query: 183 NIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTR 242
L YLH VV+RDIK N+++DK + K++DFGL K G
Sbjct: 109 FYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKX 164
Query: 243 VMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPV---DYSRPPEEVNLIEWLK 299
GT Y+APE D + G+++ E++ GR+P D+ R E + + E
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF 224
Query: 300 KMVTNRNPEGVLDPKLPEKPTSRL 323
+ + +L L + P RL
Sbjct: 225 PRTLSPEAKSLLAGLLKKDPKQRL 248
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 84/204 (41%), Gaps = 13/204 (6%)
Query: 124 VEVEAIGRVRHKNLVRLLGYCAEGAHRM-LVYEYVNNGNLEQWLHGDVGPCSPLTWEIRM 182
E + RH L L Y + R+ V EY N G L + H + T E
Sbjct: 59 TESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGEL--FFH--LSRERVFTEERAR 113
Query: 183 NIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTR 242
L YLH VV+RDIK N+++DK + K++DFGL K G
Sbjct: 114 FYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKX 169
Query: 243 VMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPV---DYSRPPEEVNLIEWLK 299
GT Y+APE D + G+++ E++ GR+P D+ R E + + E
Sbjct: 170 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF 229
Query: 300 KMVTNRNPEGVLDPKLPEKPTSRL 323
+ + +L L + P RL
Sbjct: 230 PRTLSPEAKSLLAGLLKKDPKQRL 253
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 109/228 (47%), Gaps = 34/228 (14%)
Query: 123 KVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDV----GPCSPLTW 178
+ E+E + ++ H ++++ + + +V E + G L + G+ C +
Sbjct: 63 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 121
Query: 179 EIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP---KVSDFGLAKLLGSE 235
++ + + YLHE ++HRD+K N+L+ K++DFG +K+LG E
Sbjct: 122 QMLLAV--------QYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-E 169
Query: 236 SSYITTRVMGTFGYVAPEY---ASTGMLNERSDVYSFGILIMEVISGRIPVDYSRPPEEV 292
+S + T + GT Y+APE T N D +S G+++ +SG P +S +V
Sbjct: 170 TSLMRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP--FSEHRTQV 226
Query: 293 NLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNAQ 340
+L + + N PE + ++ EK L+K++L+ VDP A+
Sbjct: 227 SLKDQITSGKYNFIPE--VWAEVSEKALD-LVKKLLV-----VDPKAR 266
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 74/162 (45%), Gaps = 12/162 (7%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E+ + +++H+N+V L H LV + V+ G L + T + +
Sbjct: 70 EIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGEL----FDRIVEKGFYTEKDASTL 125
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILI---DKHWNPKVSDFGLAKLLGSESSYITT 241
I + YLH +VHRD+K N+L D+ +SDFGL+K+ G + +
Sbjct: 126 IRQVLDAVYYLHR---MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGD--VMS 180
Query: 242 RVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPV 283
GT GYVAPE + ++ D +S G++ ++ G P
Sbjct: 181 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 222
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 109/228 (47%), Gaps = 34/228 (14%)
Query: 123 KVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDV----GPCSPLTW 178
+ E+E + ++ H ++++ + + +V E + G L + G+ C +
Sbjct: 63 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 121
Query: 179 EIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP---KVSDFGLAKLLGSE 235
++ + + YLHE ++HRD+K N+L+ K++DFG +K+LG E
Sbjct: 122 QMLLAV--------QYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-E 169
Query: 236 SSYITTRVMGTFGYVAPEY---ASTGMLNERSDVYSFGILIMEVISGRIPVDYSRPPEEV 292
+S + T + GT Y+APE T N D +S G+++ +SG P +S +V
Sbjct: 170 TSLMRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP--FSEHRTQV 226
Query: 293 NLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNAQ 340
+L + + N PE + ++ EK L+K++L+ VDP A+
Sbjct: 227 SLKDQITSGKYNFIPE--VWAEVSEKALD-LVKKLLV-----VDPKAR 266
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 109/228 (47%), Gaps = 34/228 (14%)
Query: 123 KVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDV----GPCSPLTW 178
+ E+E + ++ H ++++ + + +V E + G L + G+ C +
Sbjct: 63 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 121
Query: 179 EIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP---KVSDFGLAKLLGSE 235
++ + + YLHE ++HRD+K N+L+ K++DFG +K+LG E
Sbjct: 122 QMLLAV--------QYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-E 169
Query: 236 SSYITTRVMGTFGYVAPEY---ASTGMLNERSDVYSFGILIMEVISGRIPVDYSRPPEEV 292
+S + T + GT Y+APE T N D +S G+++ +SG P +S +V
Sbjct: 170 TSLMRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP--FSEHRTQV 226
Query: 293 NLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNAQ 340
+L + + N PE + ++ EK L+K++L+ VDP A+
Sbjct: 227 SLKDQITSGKYNFIPE--VWAEVSEKALD-LVKKLLV-----VDPKAR 266
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 109/228 (47%), Gaps = 34/228 (14%)
Query: 123 KVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDV----GPCSPLTW 178
+ E+E + ++ H ++++ + + +V E + G L + G+ C +
Sbjct: 62 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 120
Query: 179 EIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP---KVSDFGLAKLLGSE 235
++ + + YLHE ++HRD+K N+L+ K++DFG +K+LG E
Sbjct: 121 QMLLAV--------QYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-E 168
Query: 236 SSYITTRVMGTFGYVAPEY---ASTGMLNERSDVYSFGILIMEVISGRIPVDYSRPPEEV 292
+S + T + GT Y+APE T N D +S G+++ +SG P +S +V
Sbjct: 169 TSLMRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP--FSEHRTQV 225
Query: 293 NLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNAQ 340
+L + + N PE + ++ EK L+K++L+ VDP A+
Sbjct: 226 SLKDQITSGKYNFIPE--VWAEVSEKALD-LVKKLLV-----VDPKAR 265
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 79/174 (45%), Gaps = 10/174 (5%)
Query: 106 VAVKNLLNNRGQAERE-FKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K N + RE F E + + H ++V+L+G E ++ E G L
Sbjct: 421 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRS 479
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPK-VVHRDIKSSNILIDKHWNPKV 223
+L + + + ++ A LS LE K VHRDI + N+L+ K+
Sbjct: 480 FLQVR-------KFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKL 532
Query: 224 SDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVI 277
DFGL++ + + Y ++ ++APE + SDV+ FG+ + E++
Sbjct: 533 GDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 137 LVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLH 196
LV+L + ++ +V EY+ G++ L P I+L YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLH 158
Query: 197 EGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYAS 256
+++RD+K N+LID+ KV+DFG AK + T + GT Y+APE
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLCGTPEYLAPEIIL 211
Query: 257 TGMLNERSDVYSFGILIMEVISGRIPVDYSRP 288
+ N+ D ++ G+LI E+ +G P +P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 84/204 (41%), Gaps = 13/204 (6%)
Query: 124 VEVEAIGRVRHKNLVRLLGYCAEGAHRM-LVYEYVNNGNLEQWLHGDVGPCSPLTWEIRM 182
E + RH L L Y + R+ V EY N G L + H + T E
Sbjct: 54 TESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGEL--FFH--LSRERVFTEERAR 108
Query: 183 NIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTR 242
L YLH VV+RDIK N+++DK + K++DFGL K G
Sbjct: 109 FYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKX 164
Query: 243 VMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPV---DYSRPPEEVNLIEWLK 299
GT Y+APE D + G+++ E++ GR+P D+ R E + + E
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF 224
Query: 300 KMVTNRNPEGVLDPKLPEKPTSRL 323
+ + +L L + P RL
Sbjct: 225 PRTLSPEAKSLLAGLLKKDPKQRL 248
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 84/204 (41%), Gaps = 13/204 (6%)
Query: 124 VEVEAIGRVRHKNLVRLLGYCAEGAHRM-LVYEYVNNGNLEQWLHGDVGPCSPLTWEIRM 182
E + RH L L Y + R+ V EY N G L + H + T E
Sbjct: 54 TESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGEL--FFH--LSRERVFTEERAR 108
Query: 183 NIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTR 242
L YLH VV+RDIK N+++DK + K++DFGL K G
Sbjct: 109 FYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKX 164
Query: 243 VMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPV---DYSRPPEEVNLIEWLK 299
GT Y+APE D + G+++ E++ GR+P D+ R E + + E
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF 224
Query: 300 KMVTNRNPEGVLDPKLPEKPTSRL 323
+ + +L L + P RL
Sbjct: 225 PRTLSPEAKSLLAGLLKKDPKQRL 248
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 137 LVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLH 196
LV+L + ++ +V EY+ G++ L P I+L YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLH 158
Query: 197 EGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYAS 256
+++RD+K N+LID+ KV+DFG AK + T + GT Y+APE
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLCGTPEYLAPEIIL 211
Query: 257 TGMLNERSDVYSFGILIMEVISGRIPVDYSRP 288
+ N+ D ++ G+LI E+ +G P +P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 109/228 (47%), Gaps = 34/228 (14%)
Query: 123 KVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDV----GPCSPLTW 178
+ E+E + ++ H ++++ + + +V E + G L + G+ C +
Sbjct: 69 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 127
Query: 179 EIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP---KVSDFGLAKLLGSE 235
++ + + YLHE ++HRD+K N+L+ K++DFG +K+LG E
Sbjct: 128 QMLLAV--------QYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-E 175
Query: 236 SSYITTRVMGTFGYVAPEY---ASTGMLNERSDVYSFGILIMEVISGRIPVDYSRPPEEV 292
+S + T + GT Y+APE T N D +S G+++ +SG P +S +V
Sbjct: 176 TSLMRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP--FSEHRTQV 232
Query: 293 NLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNAQ 340
+L + + N PE + ++ EK L+K++L+ VDP A+
Sbjct: 233 SLKDQITSGKYNFIPE--VWAEVSEKALD-LVKKLLV-----VDPKAR 272
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 11/152 (7%)
Query: 137 LVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLH 196
LV+L + ++ +V EYV G + L P I+L YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLT----FEYLH 158
Query: 197 EGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYAS 256
+++RD+K N+LID+ +V+DFG AK + T + GT Y+APE
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIIL 211
Query: 257 TGMLNERSDVYSFGILIMEVISGRIPVDYSRP 288
+ N+ D ++ G+LI E+ +G P +P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 11/152 (7%)
Query: 137 LVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLH 196
LV+L + ++ +V EYV G + L P I+L YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLH 158
Query: 197 EGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYAS 256
+++RD+K N+LID+ +V+DFG AK + T + GT Y+APE
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLAGTPEYLAPEIIL 211
Query: 257 TGMLNERSDVYSFGILIMEVISGRIPVDYSRP 288
+ N+ D ++ G+LI E+ +G P +P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 116/270 (42%), Gaps = 56/270 (20%)
Query: 102 DNSKVAVKNLL-NNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRM--------- 151
DN VAVK +L A+RE ++ E+ H N++R +C E +
Sbjct: 47 DNRDVAVKRILPECFSFADREVQLLRESD---EHPNVIRY--FCTEKDRQFQYIAIELCA 101
Query: 152 -LVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKS 210
+ EYV + + H + P + ++ T GL++LH +VHRD+K
Sbjct: 102 ATLQEYVEQKD---FAHLGLEP---------ITLLQQTTSGLAHLHS---LNIVHRDLKP 146
Query: 211 SNILI---DKHWNPK--VSDFGLAKLL--GSESSYITTRVMGTFGYVAPEYASTGMLNER 263
NILI + H K +SDFGL K L G S + V GT G++APE S
Sbjct: 147 HNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENP 206
Query: 264 S---DVYSFGILIMEVIS-GRIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKP 319
+ D++S G + VIS G P S L++ LD PEK
Sbjct: 207 TYTVDIFSAGCVFYYVISEGSHPFGKS-----------LQRQANILLGACSLDCLHPEKH 255
Query: 320 TSRLLKRILLVALRCVDPNAQKRPKMGHVV 349
++ R L+ + +DP QKRP HV+
Sbjct: 256 ED-VIARELIEKMIAMDP--QKRPSAKHVL 282
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 69/147 (46%), Gaps = 19/147 (12%)
Query: 144 CAEGAHRM-LVYEYVNNGNLEQWLHGDVGPCSP-----LTWEIRMNIILGTAKGLSYLHE 197
C + R+ V EYVN G+L + VG EI + + +KG
Sbjct: 410 CFQTMDRLYFVMEYVNGGDLMYHIQ-QVGRFKEPHAVFYAAEIAIGLFFLQSKG------ 462
Query: 198 GLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYAST 257
+++RD+K N+++D + K++DFG+ K T GT Y+APE +
Sbjct: 463 -----IIYRDLKLDNVMLDSEGHIKIADFGMCK-ENIWDGVTTKXFCGTPDYIAPEIIAY 516
Query: 258 GMLNERSDVYSFGILIMEVISGRIPVD 284
+ D ++FG+L+ E+++G+ P +
Sbjct: 517 QPYGKSVDWWAFGVLLYEMLAGQAPFE 543
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 75/150 (50%), Gaps = 25/150 (16%)
Query: 144 CAEGAHRM-LVYEYVNNGNLEQWLHGDVGPCSP-----LTWEIRMNIILGTAKGLSYLHE 197
C + R+ V EYVN G+L + VG EI + + +KG
Sbjct: 89 CFQTMDRLYFVMEYVNGGDLMYHIQ-QVGRFKEPHAVFYAAEIAIGLFFLQSKG------ 141
Query: 198 GLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSY--ITTRVM-GTFGYVAPEY 254
+++RD+K N+++D + K++DFG+ K E+ + +TT+ GT Y+APE
Sbjct: 142 -----IIYRDLKLDNVMLDSEGHIKIADFGMCK----ENIWDGVTTKXFCGTPDYIAPEI 192
Query: 255 ASTGMLNERSDVYSFGILIMEVISGRIPVD 284
+ + D ++FG+L+ E+++G+ P +
Sbjct: 193 IAYQPYGKSVDWWAFGVLLYEMLAGQAPFE 222
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 88/190 (46%), Gaps = 32/190 (16%)
Query: 106 VAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
VA+K L N+ A+R ++ E+ + V HKN++ LL + +L
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNV------------FTPQKSL 98
Query: 163 EQWLH-------GDVGPCSPLTWEI---RMNIIL-GTAKGLSYLHEGLEPKVVHRDIKSS 211
E++ D C + E+ RM+ +L G+ +LH ++HRD+K S
Sbjct: 99 EEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPS 155
Query: 212 NILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGI 271
NI++ K+ DFGLA+ G +S++ + T Y APE E D++S G
Sbjct: 156 NIVVKSDCTLKILDFGLARTAG--TSFMMEPEVVTRYYRAPEVILGMGYKENVDLWSVGC 213
Query: 272 LIMEVISGRI 281
++ E++ +I
Sbjct: 214 IMGEMVCHKI 223
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 11/152 (7%)
Query: 137 LVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLH 196
LV+L + ++ +V EYV G + L P I+L YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLH 158
Query: 197 EGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYAS 256
+++RD+K N+LID+ +V+DFG AK + T + GT Y+APE
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLXGTPEYLAPEIIL 211
Query: 257 TGMLNERSDVYSFGILIMEVISGRIPVDYSRP 288
+ N+ D ++ G+LI E+ +G P +P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 11/152 (7%)
Query: 137 LVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLH 196
LV+L + ++ +V EYV G + L P I+L YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLH 158
Query: 197 EGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYAS 256
+++RD+K N+LID+ +V+DFG AK + T + GT Y+APE
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIIL 211
Query: 257 TGMLNERSDVYSFGILIMEVISGRIPVDYSRP 288
+ N+ D ++ G+LI E+ +G P +P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 11/152 (7%)
Query: 137 LVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLH 196
LV+L + ++ +V EYV G + L P I+L YLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLH 159
Query: 197 EGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYAS 256
+++RD+K N+LID+ +V+DFG AK + T + GT Y+APE
Sbjct: 160 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIIL 212
Query: 257 TGMLNERSDVYSFGILIMEVISGRIPVDYSRP 288
+ N+ D ++ G+LI E+ +G P +P
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 11/152 (7%)
Query: 137 LVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLH 196
LV+L + ++ +V EYV G + L P I+L YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLH 158
Query: 197 EGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYAS 256
+++RD+K N+LID+ +V+DFG AK + T + GT Y+APE
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIIL 211
Query: 257 TGMLNERSDVYSFGILIMEVISGRIPVDYSRP 288
+ N+ D ++ G+LI E+ +G P +P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 11/152 (7%)
Query: 137 LVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLH 196
LV+L + ++ +V EYV G + L P I+L YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLH 158
Query: 197 EGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYAS 256
+++RD+K N+LID+ +V+DFG AK + T + GT Y+APE
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIIL 211
Query: 257 TGMLNERSDVYSFGILIMEVISGRIPVDYSRP 288
+ N+ D ++ G+LI E+ +G P +P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 109/228 (47%), Gaps = 34/228 (14%)
Query: 123 KVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDV----GPCSPLTW 178
+ E+E + ++ H ++++ + + +V E + G L + G+ C +
Sbjct: 188 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 246
Query: 179 EIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP---KVSDFGLAKLLGSE 235
++ + + YLHE ++HRD+K N+L+ K++DFG +K+LG E
Sbjct: 247 QMLL--------AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-E 294
Query: 236 SSYITTRVMGTFGYVAPEY---ASTGMLNERSDVYSFGILIMEVISGRIPVDYSRPPEEV 292
+S + T + GT Y+APE T N D +S G+++ +SG P +S +V
Sbjct: 295 TSLMRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP--FSEHRTQV 351
Query: 293 NLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNAQ 340
+L + + N PE + ++ EK L+K++L+ VDP A+
Sbjct: 352 SLKDQITSGKYNFIPE--VWAEVSEKALD-LVKKLLV-----VDPKAR 391
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 82/164 (50%), Gaps = 12/164 (7%)
Query: 124 VEVEAIGRVRHKNLVRLLGYCAEGAHRM-LVYEYVNNGNLEQWLHGDVGPCSPLTWEIRM 182
VE + + +V H + L Y E + LV +N G++ ++ +V +P E R
Sbjct: 234 VEKKILAKV-HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIY-NVDEDNPGFQEPRA 291
Query: 183 NIILGTAK---GLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYI 239
I TA+ GL +LH+ +++RD+K N+L+D N ++SD GLA L + +
Sbjct: 292 --IFYTAQIVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK- 345
Query: 240 TTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPV 283
T GT G++APE + D ++ G+ + E+I+ R P
Sbjct: 346 TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 11/152 (7%)
Query: 137 LVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLH 196
LV+L + ++ +V EYV G + L P I+L YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLH 158
Query: 197 EGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYAS 256
+++RD+K N+LID+ +V+DFG AK + T + GT Y+APE
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIIL 211
Query: 257 TGMLNERSDVYSFGILIMEVISGRIPVDYSRP 288
+ N+ D ++ G+LI E+ +G P +P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 83/185 (44%), Gaps = 15/185 (8%)
Query: 105 KVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
K+ K+LL Q E+ +E+ + H+++V G+ + +V E +L +
Sbjct: 70 KIVPKSLLLKPHQREK-MSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE 128
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
P I+LG YLH +V+HRD+K N+ +++ K+
Sbjct: 129 LHKRRKALTEPEARYYLRQIVLGC----QYLHRN---RVIHRDLKLGNLFLNEDLEVKIG 181
Query: 225 DFGLAKLLGSESSYITTR---VMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRI 281
DFGLA ++ Y R + GT Y+APE S + DV+S G ++ ++ G+
Sbjct: 182 DFGLA----TKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP 237
Query: 282 PVDYS 286
P + S
Sbjct: 238 PFETS 242
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 83/185 (44%), Gaps = 15/185 (8%)
Query: 105 KVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
K+ K+LL Q E+ +E+ + H+++V G+ + +V E +L +
Sbjct: 72 KIVPKSLLLKPHQREK-MSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE 130
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
P I+LG YLH +V+HRD+K N+ +++ K+
Sbjct: 131 LHKRRKALTEPEARYYLRQIVLGC----QYLHRN---RVIHRDLKLGNLFLNEDLEVKIG 183
Query: 225 DFGLAKLLGSESSYITTR---VMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRI 281
DFGLA ++ Y R + GT Y+APE S + DV+S G ++ ++ G+
Sbjct: 184 DFGLA----TKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP 239
Query: 282 PVDYS 286
P + S
Sbjct: 240 PFETS 244
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 11/152 (7%)
Query: 137 LVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLH 196
LV+L + ++ +V EYV G + L P I+L YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLH 158
Query: 197 EGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYAS 256
+++RD+K N+LID+ +V+DFG AK + T + GT Y+APE
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIIL 211
Query: 257 TGMLNERSDVYSFGILIMEVISGRIPVDYSRP 288
+ N+ D ++ G+LI E+ +G P +P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 93/208 (44%), Gaps = 22/208 (10%)
Query: 117 QAERE-FKVEVEAIGRVRHKNLVRLLGY---CAEGAHRM-LVYEYVNNGNLEQWL-HGDV 170
++ER+ FK E E + ++H N+VR +G + LV E +G L+ +L V
Sbjct: 66 KSERQRFKEEAEXLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKV 125
Query: 171 GPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDK-HWNPKVSDFGLA 229
L R + KGL +LH P ++HRD+K NI I + K+ D GLA
Sbjct: 126 XKIKVLRSWCRQIL-----KGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLA 179
Query: 230 KLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVDYSRPP 289
L + + V+GT + APE +E DVY+FG +E + P YS
Sbjct: 180 TL---KRASFAKAVIGTPEFXAPEXYEE-KYDESVDVYAFGXCXLEXATSEYP--YS--- 230
Query: 290 EEVNLIEWLKKMVTNRNPEGVLDPKLPE 317
E N + +++ + P +PE
Sbjct: 231 ECQNAAQIYRRVTSGVKPASFDKVAIPE 258
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 82/164 (50%), Gaps = 12/164 (7%)
Query: 124 VEVEAIGRVRHKNLVRLLGYCAEGAHRM-LVYEYVNNGNLEQWLHGDVGPCSPLTWEIRM 182
VE + + +V H + L Y E + LV +N G++ ++ +V +P E R
Sbjct: 234 VEKKILAKV-HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIY-NVDEDNPGFQEPRA 291
Query: 183 NIILGTAK---GLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYI 239
I TA+ GL +LH+ +++RD+K N+L+D N ++SD GLA L + +
Sbjct: 292 --IFYTAQIVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK- 345
Query: 240 TTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPV 283
T GT G++APE + D ++ G+ + E+I+ R P
Sbjct: 346 TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 96/210 (45%), Gaps = 37/210 (17%)
Query: 106 VAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAE-------GAHRMLVYEYVN 158
VAVK + ++R + + E+ +RH N+ LG+ A L+ Y
Sbjct: 34 VAVK-IFSSRDEQSWFRETEIYNTVLLRHDNI---LGFIASDMTSRNSSTQLWLITHYHE 89
Query: 159 NGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGL-----EPKVVHRDIKSSNI 213
+G+L +L L + + + + A GL++LH + +P + HRD KS N+
Sbjct: 90 HGSLYDFLQRQT-----LEPHLALRLAVSAACGLAHLHVEIFGTQGKPAIAHRDFKSRNV 144
Query: 214 LIDKHWNPKVSDFGLAKLLGSESSYITT----RVMGTFGYVAPEYASTGMLNER------ 263
L+ + ++D GLA + S Y+ RV GT Y+APE + +
Sbjct: 145 LVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRV-GTKRYMAPEVLDEQIRTDCFESYKW 203
Query: 264 SDVYSFGILIMEV----ISGRIPVDYSRPP 289
+D+++FG+++ E+ I I DY RPP
Sbjct: 204 TDIWAFGLVLWEIARRTIVNGIVEDY-RPP 232
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 109/228 (47%), Gaps = 34/228 (14%)
Query: 123 KVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDV----GPCSPLTW 178
+ E+E + ++ H ++++ + + +V E + G L + G+ C +
Sbjct: 202 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 260
Query: 179 EIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP---KVSDFGLAKLLGSE 235
++ + + YLHE ++HRD+K N+L+ K++DFG +K+LG E
Sbjct: 261 QMLL--------AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-E 308
Query: 236 SSYITTRVMGTFGYVAPEY---ASTGMLNERSDVYSFGILIMEVISGRIPVDYSRPPEEV 292
+S + T + GT Y+APE T N D +S G+++ +SG P +S +V
Sbjct: 309 TSLMRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP--FSEHRTQV 365
Query: 293 NLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNAQ 340
+L + + N PE + ++ EK L+K++L+ VDP A+
Sbjct: 366 SLKDQITSGKYNFIPE--VWAEVSEKALD-LVKKLLV-----VDPKAR 405
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 76/169 (44%), Gaps = 22/169 (13%)
Query: 179 EIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSY 238
+I I + K L +LH L V+HRD+K SN+LI+ K DFG++ L + +
Sbjct: 136 DILGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAK 193
Query: 239 ITTRVMGTFGYVAPEYASTGM----LNERSDVYSFGILIMEVISGRIPVDYSRPPEEVNL 294
G Y APE + + + +SD++S GI +E+ R P D P
Sbjct: 194 DID--AGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTP----- 246
Query: 295 IEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNAQKRP 343
+ LK++V + P+ P + + +C+ N+++RP
Sbjct: 247 FQQLKQVVEEPS---------PQLPADKFSAEFVDFTSQCLKKNSKERP 286
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 82/164 (50%), Gaps = 12/164 (7%)
Query: 124 VEVEAIGRVRHKNLVRLLGYCAEGAHRM-LVYEYVNNGNLEQWLHGDVGPCSPLTWEIRM 182
VE + + +V H + L Y E + LV +N G++ ++ +V +P E R
Sbjct: 234 VEKKILAKV-HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIY-NVDEDNPGFQEPRA 291
Query: 183 NIILGTAK---GLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYI 239
I TA+ GL +LH+ +++RD+K N+L+D N ++SD GLA L + +
Sbjct: 292 --IFYTAQIVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK- 345
Query: 240 TTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPV 283
T GT G++APE + D ++ G+ + E+I+ R P
Sbjct: 346 TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 78/174 (44%), Gaps = 13/174 (7%)
Query: 113 NNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGP 172
+ RG + + + EV + ++H N++ L +L+ E V G L +L
Sbjct: 52 SRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AE 107
Query: 173 CSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK----VSDFGL 228
LT E + G+ YLH ++ H D+K NI++ PK + DFGL
Sbjct: 108 KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
Query: 229 AKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIP 282
A + + + + GT +VAPE + L +D++S G++ ++SG P
Sbjct: 165 AHKIDFGNEF--KNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 88/185 (47%), Gaps = 20/185 (10%)
Query: 106 VAVKNLLNNRGQAEREFK---VEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
VA+K + + Q+ +++ EV + ++RH N ++ G LV EY G+
Sbjct: 43 VAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSA 101
Query: 163 EQWLHGDVGPCSPLTWEIRMNIIL-GTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
L P E+ + + G +GL+YLH ++HRD+K+ NIL+ +
Sbjct: 102 SDLLEVHKKPLQ----EVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLV 154
Query: 222 KVSDFGLAKLLGSESSYITTRVMGTFGYVAPEY---ASTGMLNERSDVYSFGILIMEVIS 278
K+ DFG A ++ + ++ GT ++APE G + + DV+S GI +E+
Sbjct: 155 KLGDFGSASIMAPANXFV-----GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 209
Query: 279 GRIPV 283
+ P+
Sbjct: 210 RKPPL 214
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 88/185 (47%), Gaps = 20/185 (10%)
Query: 106 VAVKNLLNNRGQAEREFK---VEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
VA+K + + Q+ +++ EV + ++RH N ++ G LV EY G+
Sbjct: 82 VAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSA 140
Query: 163 EQWLHGDVGPCSPLTWEIRMNIIL-GTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
L P E+ + + G +GL+YLH ++HRD+K+ NIL+ +
Sbjct: 141 SDLLEVHKKPLQ----EVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLV 193
Query: 222 KVSDFGLAKLLGSESSYITTRVMGTFGYVAPEY---ASTGMLNERSDVYSFGILIMEVIS 278
K+ DFG A ++ + ++ GT ++APE G + + DV+S GI +E+
Sbjct: 194 KLGDFGSASIMAPANXFV-----GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 248
Query: 279 GRIPV 283
+ P+
Sbjct: 249 RKPPL 253
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 78/174 (44%), Gaps = 13/174 (7%)
Query: 113 NNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGP 172
+ RG + + + EV + ++H N++ L +L+ E V G L +L
Sbjct: 51 SRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AE 106
Query: 173 CSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK----VSDFGL 228
LT E + G+ YLH ++ H D+K NI++ PK + DFGL
Sbjct: 107 KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 163
Query: 229 AKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIP 282
A + + + + GT +VAPE + L +D++S G++ ++SG P
Sbjct: 164 AHKIDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 89/185 (48%), Gaps = 18/185 (9%)
Query: 105 KVAVKNL--LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
+VA+K + ++ +R + E++ + R RH+N++ + + Y+ +
Sbjct: 50 RVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM 108
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
E L+ + L+ + + +GL Y+H V+HRD+K SN+L++ + K
Sbjct: 109 ETDLYK-LLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLK 164
Query: 223 VSDFGLAKLLGSESSY--ITTRVMGTFGYVAPEYASTGMLNERS-----DVYSFGILIME 275
+ DFGLA++ + + T + T Y APE MLN + D++S G ++ E
Sbjct: 165 ICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI----MLNSKGYTKSIDIWSVGCILAE 220
Query: 276 VISGR 280
++S R
Sbjct: 221 MLSNR 225
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 82/164 (50%), Gaps = 12/164 (7%)
Query: 124 VEVEAIGRVRHKNLVRLLGYCAEGAHRM-LVYEYVNNGNLEQWLHGDVGPCSPLTWEIRM 182
VE + + +V H + L Y E + LV +N G++ ++ +V +P E R
Sbjct: 234 VEKKILAKV-HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIY-NVDEDNPGFQEPRA 291
Query: 183 NIILGTAK---GLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYI 239
I TA+ GL +LH+ +++RD+K N+L+D N ++SD GLA L + +
Sbjct: 292 --IFYTAQIVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK- 345
Query: 240 TTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPV 283
T GT G++APE + D ++ G+ + E+I+ R P
Sbjct: 346 TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 89/185 (48%), Gaps = 18/185 (9%)
Query: 105 KVAVKNL--LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
+VA+K + ++ +R + E++ + R RH+N++ + + Y+ +
Sbjct: 48 RVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM 106
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
E L+ + L+ + + +GL Y+H V+HRD+K SN+L++ + K
Sbjct: 107 ETDLYK-LLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLK 162
Query: 223 VSDFGLAKLLGSESSY--ITTRVMGTFGYVAPEYASTGMLNERS-----DVYSFGILIME 275
+ DFGLA++ + + T + T Y APE MLN + D++S G ++ E
Sbjct: 163 ICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI----MLNSKGYTKSIDIWSVGCILAE 218
Query: 276 VISGR 280
++S R
Sbjct: 219 MLSNR 223
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 11/152 (7%)
Query: 137 LVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLH 196
LV+L + ++ +V EYV G + L P I+L YLH
Sbjct: 98 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLT----FEYLH 153
Query: 197 EGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYAS 256
+++RD+K N+LID+ +V+DFG AK + T + GT Y+APE
Sbjct: 154 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIIL 206
Query: 257 TGMLNERSDVYSFGILIMEVISGRIPVDYSRP 288
+ N+ D ++ G+LI E+ +G P +P
Sbjct: 207 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 238
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 11/152 (7%)
Query: 137 LVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLH 196
LV+L + ++ +V EY G + L P I+L YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLH 158
Query: 197 EGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYAS 256
+++RD+K N++ID+ KV+DFGLAK + T + GT Y+APE
Sbjct: 159 S---LDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGR----TWXLCGTPEYLAPEIIL 211
Query: 257 TGMLNERSDVYSFGILIMEVISGRIPVDYSRP 288
+ N+ D ++ G+LI E+ +G P +P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 11/152 (7%)
Query: 137 LVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLH 196
LV+L + ++ +V EYV G + L P I+L YLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLH 159
Query: 197 EGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYAS 256
+++RD+K N+LID+ +V+DFG AK + T + GT Y+APE
Sbjct: 160 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIIL 212
Query: 257 TGMLNERSDVYSFGILIMEVISGRIPVDYSRP 288
+ N+ D ++ G+LI E+ +G P +P
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 78/174 (44%), Gaps = 13/174 (7%)
Query: 113 NNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGP 172
+ RG + + + EV + ++H N++ L +L+ E V G L +L
Sbjct: 52 SRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AE 107
Query: 173 CSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK----VSDFGL 228
LT E + G+ YLH ++ H D+K NI++ PK + DFGL
Sbjct: 108 KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
Query: 229 AKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIP 282
A + + + + GT +VAPE + L +D++S G++ ++SG P
Sbjct: 165 AHKIDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 78/174 (44%), Gaps = 13/174 (7%)
Query: 113 NNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGP 172
+ RG + + + EV + ++H N++ L +L+ E V G L +L
Sbjct: 52 SRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AE 107
Query: 173 CSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK----VSDFGL 228
LT E + G+ YLH ++ H D+K NI++ PK + DFGL
Sbjct: 108 KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
Query: 229 AKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIP 282
A + + + + GT +VAPE + L +D++S G++ ++SG P
Sbjct: 165 AHKIDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 78/174 (44%), Gaps = 13/174 (7%)
Query: 113 NNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGP 172
+ RG + + + EV + ++H N++ L +L+ E V G L +L
Sbjct: 51 SRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AE 106
Query: 173 CSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK----VSDFGL 228
LT E + G+ YLH ++ H D+K NI++ PK + DFGL
Sbjct: 107 KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 163
Query: 229 AKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIP 282
A + + + + GT +VAPE + L +D++S G++ ++SG P
Sbjct: 164 AHKIDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 78/174 (44%), Gaps = 13/174 (7%)
Query: 113 NNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGP 172
+ RG + + + EV + ++H N++ L +L+ E V G L +L
Sbjct: 52 SRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AE 107
Query: 173 CSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK----VSDFGL 228
LT E + G+ YLH ++ H D+K NI++ PK + DFGL
Sbjct: 108 KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
Query: 229 AKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIP 282
A + + + + GT +VAPE + L +D++S G++ ++SG P
Sbjct: 165 AHKIDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 73/172 (42%), Gaps = 11/172 (6%)
Query: 114 NRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPC 173
N ++ F+ EV + H N+V+L LV EY + G + +L V
Sbjct: 53 NSSSLQKLFR-EVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYL---VAHG 108
Query: 174 SPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLG 233
E R + Y H+ +VHRD+K+ N+L+D N K++DFG +
Sbjct: 109 RXKEKEARAKF-RQIVSAVQYCHQKF---IVHRDLKAENLLLDADXNIKIADFGFSNEFT 164
Query: 234 SESSYITTRVMGTFGYVAPE-YASTGMLNERSDVYSFGILIMEVISGRIPVD 284
+ G Y APE + DV+S G+++ ++SG +P D
Sbjct: 165 FGNK--LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 11/152 (7%)
Query: 137 LVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLH 196
LV+L + ++ +V EYV G + L P I+L YLH
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLH 179
Query: 197 EGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYAS 256
+++RD+K N+LID+ +V+DFG AK + T + GT Y+APE
Sbjct: 180 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGA----TWTLCGTPEYLAPEIIL 232
Query: 257 TGMLNERSDVYSFGILIMEVISGRIPVDYSRP 288
+ N+ D ++ G+LI E+ +G P +P
Sbjct: 233 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 264
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 11/152 (7%)
Query: 137 LVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLH 196
LV+L + ++ +V EYV G + L P I+L YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLH 158
Query: 197 EGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYAS 256
+++RD+K N+LID+ +V+DFG AK + T + GT Y+APE
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIIL 211
Query: 257 TGMLNERSDVYSFGILIMEVISGRIPVDYSRP 288
+ N+ D ++ G+LI E+ +G P +P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 11/152 (7%)
Query: 137 LVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLH 196
LV+L + ++ +V EYV G + L P I+L YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLT----FEYLH 158
Query: 197 EGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYAS 256
+++RD+K N+LID+ +V+DFG AK + T + GT Y+APE
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIIL 211
Query: 257 TGMLNERSDVYSFGILIMEVISGRIPVDYSRP 288
+ N+ D ++ G+LI E+ +G P +P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 11/152 (7%)
Query: 137 LVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLH 196
LV+L + ++ +V EYV G + L P I+L YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLT----FEYLH 158
Query: 197 EGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYAS 256
+++RD+K N+LID+ +V+DFG AK + T + GT Y+APE
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIIL 211
Query: 257 TGMLNERSDVYSFGILIMEVISGRIPVDYSRP 288
+ N+ D ++ G+LI E+ +G P +P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 11/152 (7%)
Query: 137 LVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLH 196
LV+L + ++ +V EYV G + L P I+L YLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLH 159
Query: 197 EGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYAS 256
+++RD+K N+LID+ +V+DFG AK + T + GT Y+APE
Sbjct: 160 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIIL 212
Query: 257 TGMLNERSDVYSFGILIMEVISGRIPVDYSRP 288
+ N+ D ++ G+LI E+ +G P +P
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 11/152 (7%)
Query: 137 LVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLH 196
LV+L + ++ +V EYV G + L P I+L YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLH 158
Query: 197 EGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYAS 256
+++RD+K N+LID+ +V+DFG AK + T + GT Y+APE
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIIL 211
Query: 257 TGMLNERSDVYSFGILIMEVISGRIPVDYSRP 288
+ N+ D ++ G+LI E+ +G P +P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 11/152 (7%)
Query: 137 LVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLH 196
LV+L + ++ +V EYV G + L P I+L YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLH 158
Query: 197 EGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYAS 256
+++RD+K N+LID+ +V+DFG AK + T + GT Y+APE
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIIL 211
Query: 257 TGMLNERSDVYSFGILIMEVISGRIPVDYSRP 288
+ N+ D ++ G+LI E+ +G P +P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 11/152 (7%)
Query: 137 LVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLH 196
LV+L + ++ +V EYV G + L P I+L YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLT----FEYLH 158
Query: 197 EGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYAS 256
+++RD+K N+LID+ +V+DFG AK + T + GT Y+APE
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIIL 211
Query: 257 TGMLNERSDVYSFGILIMEVISGRIPVDYSRP 288
+ N+ D ++ G+LI E+ +G P +P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 11/152 (7%)
Query: 137 LVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLH 196
LV+L + ++ +V EYV G + L P I+L YLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLH 159
Query: 197 EGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYAS 256
+++RD+K N+LID+ +V+DFG AK + T + GT Y+APE
Sbjct: 160 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIIL 212
Query: 257 TGMLNERSDVYSFGILIMEVISGRIPVDYSRP 288
+ N+ D ++ G+LI E+ +G P +P
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 84/180 (46%), Gaps = 10/180 (5%)
Query: 106 VAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQW 165
A K ++ + + E++ + +RH LV L + +++YE+++ G L +
Sbjct: 79 FAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEK 138
Query: 166 LHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILI-DKHWNP-KV 223
+ + + ++ + + + KGL ++HE VH D+K NI+ K N K+
Sbjct: 139 VADE---HNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKL 192
Query: 224 SDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPV 283
DFGL L + S T GT + APE A + +D++S G+L ++SG P
Sbjct: 193 IDFGLTAHLDPKQSVKVT--TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPF 250
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 69/152 (45%), Gaps = 11/152 (7%)
Query: 137 LVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLH 196
LV+L + ++ +V EYV G + L P I+L YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLH 158
Query: 197 EGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYAS 256
+++RD+K N+LID+ +V+DFG AK + T + GT Y+APE
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIIL 211
Query: 257 TGMLNERSDVYSFGILIMEVISGRIPVDYSRP 288
+ N+ D ++ G+LI E+ +G P P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADEP 243
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 11/152 (7%)
Query: 137 LVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLH 196
LV+L + ++ +V EYV G + L P I+L YLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLH 159
Query: 197 EGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYAS 256
+++RD+K N+LID+ +V+DFG AK + T + GT Y+APE
Sbjct: 160 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIIL 212
Query: 257 TGMLNERSDVYSFGILIMEVISGRIPVDYSRP 288
+ N+ D ++ G+LI E+ +G P +P
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 11/152 (7%)
Query: 137 LVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLH 196
LV+L + ++ +V EYV G + L P I+L YLH
Sbjct: 90 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLH 145
Query: 197 EGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYAS 256
+++RD+K N+LID+ +V+DFG AK + T + GT Y+APE
Sbjct: 146 S---LDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIIL 198
Query: 257 TGMLNERSDVYSFGILIMEVISGRIPVDYSRP 288
+ N+ D ++ G+LI E+ +G P +P
Sbjct: 199 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 230
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 89/185 (48%), Gaps = 18/185 (9%)
Query: 105 KVAVKNL--LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
+VA+K + ++ +R + E++ + R RH+N++ + + Y+ +
Sbjct: 48 RVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM 106
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
E L+ + L+ + + +GL Y+H V+HRD+K SN+L++ + K
Sbjct: 107 ETDLYK-LLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLK 162
Query: 223 VSDFGLAKLLGSESSY--ITTRVMGTFGYVAPEYASTGMLNERS-----DVYSFGILIME 275
+ DFGLA++ + + T + T Y APE MLN + D++S G ++ E
Sbjct: 163 ICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI----MLNSKGYTKSIDIWSVGCILAE 218
Query: 276 VISGR 280
++S R
Sbjct: 219 MLSNR 223
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 89/185 (48%), Gaps = 18/185 (9%)
Query: 105 KVAVKNL--LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
+VA+K + ++ +R + E++ + R RH+N++ + + Y+ +
Sbjct: 58 RVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM 116
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
E L+ + L+ + + +GL Y+H V+HRD+K SN+L++ + K
Sbjct: 117 ETDLYK-LLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLK 172
Query: 223 VSDFGLAKLLGSESSY--ITTRVMGTFGYVAPEYASTGMLNERS-----DVYSFGILIME 275
+ DFGLA++ + + T + T Y APE MLN + D++S G ++ E
Sbjct: 173 ICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI----MLNSKGYTKSIDIWSVGCILAE 228
Query: 276 VISGR 280
++S R
Sbjct: 229 MLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 89/185 (48%), Gaps = 18/185 (9%)
Query: 105 KVAVKNL--LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
+VA+K + ++ +R + E++ + R RH+N++ + + Y+ +
Sbjct: 50 RVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM 108
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
E L+ + L+ + + +GL Y+H V+HRD+K SN+L++ + K
Sbjct: 109 ETDLYK-LLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLK 164
Query: 223 VSDFGLAKLLGSESSY--ITTRVMGTFGYVAPEYASTGMLNERS-----DVYSFGILIME 275
+ DFGLA++ + + T + T Y APE MLN + D++S G ++ E
Sbjct: 165 ICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI----MLNSKGYTKSIDIWSVGCILAE 220
Query: 276 VISGR 280
++S R
Sbjct: 221 MLSNR 225
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 11/152 (7%)
Query: 137 LVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLH 196
LV+L + ++ +V EYV G + L P I+L YLH
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLT----FEYLH 179
Query: 197 EGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYAS 256
+++RD+K N+LID+ +V+DFG AK + T + GT Y+APE
Sbjct: 180 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIIL 232
Query: 257 TGMLNERSDVYSFGILIMEVISGRIPVDYSRP 288
+ N+ D ++ G+LI E+ +G P +P
Sbjct: 233 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 264
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 69/152 (45%), Gaps = 11/152 (7%)
Query: 137 LVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLH 196
LV+L + ++ +V EY G + L P I+L YLH
Sbjct: 104 LVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLH 159
Query: 197 EGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYAS 256
+++RD+K N+LID+ KV+DFG AK + T + GT Y+APE
Sbjct: 160 S---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLCGTPEYLAPEIIL 212
Query: 257 TGMLNERSDVYSFGILIMEVISGRIPVDYSRP 288
+ N+ D ++ G+LI E+ +G P +P
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 11/152 (7%)
Query: 137 LVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLH 196
LV+L + ++ +V EYV G + L P I+L YLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLH 159
Query: 197 EGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYAS 256
+++RD+K N+LID+ +V+DFG AK + T + GT Y+APE
Sbjct: 160 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWTLCGTPEYLAPEIIL 212
Query: 257 TGMLNERSDVYSFGILIMEVISGRIPVDYSRP 288
+ N+ D ++ G+LI E+ +G P +P
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 89/185 (48%), Gaps = 18/185 (9%)
Query: 105 KVAVKNL--LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
+VA+K + ++ +R + E++ + R RH+N++ + + Y+ +
Sbjct: 55 RVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM 113
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
E L+ + L+ + + +GL Y+H V+HRD+K SN+L++ + K
Sbjct: 114 ETDLYK-LLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLK 169
Query: 223 VSDFGLAKLLGSESSY--ITTRVMGTFGYVAPEYASTGMLNERS-----DVYSFGILIME 275
+ DFGLA++ + + T + T Y APE MLN + D++S G ++ E
Sbjct: 170 ICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI----MLNSKGYTKSIDIWSVGCILAE 225
Query: 276 VISGR 280
++S R
Sbjct: 226 MLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 89/185 (48%), Gaps = 18/185 (9%)
Query: 105 KVAVKNL--LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
+VA+K + ++ +R + E++ + R RH+N++ + + Y+ +
Sbjct: 56 RVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM 114
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
E L+ + L+ + + +GL Y+H V+HRD+K SN+L++ + K
Sbjct: 115 ETDLYK-LLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLK 170
Query: 223 VSDFGLAKLLGSESSY--ITTRVMGTFGYVAPEYASTGMLNERS-----DVYSFGILIME 275
+ DFGLA++ + + T + T Y APE MLN + D++S G ++ E
Sbjct: 171 ICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI----MLNSKGYTKSIDIWSVGCILAE 226
Query: 276 VISGR 280
++S R
Sbjct: 227 MLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 89/185 (48%), Gaps = 18/185 (9%)
Query: 105 KVAVKNL--LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
+VA+K + ++ +R + E++ + R RH+N++ + + Y+ +
Sbjct: 47 RVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM 105
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
E L+ + L+ + + +GL Y+H V+HRD+K SN+L++ + K
Sbjct: 106 ETDLYK-LLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLK 161
Query: 223 VSDFGLAKLLGSESSY--ITTRVMGTFGYVAPEYASTGMLNERS-----DVYSFGILIME 275
+ DFGLA++ + + T + T Y APE MLN + D++S G ++ E
Sbjct: 162 ICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI----MLNSKGYTKSIDIWSVGCILAE 217
Query: 276 VISGR 280
++S R
Sbjct: 218 MLSNR 222
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 11/152 (7%)
Query: 137 LVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLH 196
LV+L + ++ +V EYV G + L P I+L YLH
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLH 158
Query: 197 EGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYAS 256
+++RD+K N+LID+ +V+DFG AK + T + GT Y+APE
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIIL 211
Query: 257 TGMLNERSDVYSFGILIMEVISGRIPVDYSRP 288
+ N+ D ++ G+LI E+ +G P +P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 89/185 (48%), Gaps = 18/185 (9%)
Query: 105 KVAVKNL--LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
+VA+K + ++ +R + E++ + R RH+N++ + + Y+ +
Sbjct: 54 RVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM 112
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
E L+ + L+ + + +GL Y+H V+HRD+K SN+L++ + K
Sbjct: 113 ETDLYK-LLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLK 168
Query: 223 VSDFGLAKLLGSESSY--ITTRVMGTFGYVAPEYASTGMLNERS-----DVYSFGILIME 275
+ DFGLA++ + + T + T Y APE MLN + D++S G ++ E
Sbjct: 169 ICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI----MLNSKGYTKSIDIWSVGCILAE 224
Query: 276 VISGR 280
++S R
Sbjct: 225 MLSNR 229
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 78/174 (44%), Gaps = 13/174 (7%)
Query: 113 NNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGP 172
+ RG + + + EV + ++H N++ L +L+ E V G L +L
Sbjct: 52 SRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AE 107
Query: 173 CSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK----VSDFGL 228
LT E + G+ YLH ++ H D+K NI++ PK + DFGL
Sbjct: 108 KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
Query: 229 AKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIP 282
A + + + + GT +VAPE + L +D++S G++ ++SG P
Sbjct: 165 AHKIDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 11/152 (7%)
Query: 137 LVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLH 196
LV+L + ++ +V EYV G + L P I+L YLH
Sbjct: 96 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLH 151
Query: 197 EGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYAS 256
+++RD+K N+LID+ +V+DFG AK + T + GT Y+APE
Sbjct: 152 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIIL 204
Query: 257 TGMLNERSDVYSFGILIMEVISGRIPVDYSRP 288
+ N+ D ++ G+LI E+ +G P +P
Sbjct: 205 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 236
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 11/152 (7%)
Query: 137 LVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLH 196
LV+L + ++ +V EYV G + L P I+L YLH
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLH 158
Query: 197 EGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYAS 256
+++RD+K N+LID+ +V+DFG AK + T + GT Y+APE
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIIL 211
Query: 257 TGMLNERSDVYSFGILIMEVISGRIPVDYSRP 288
+ N+ D ++ G+LI E+ +G P +P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 11/152 (7%)
Query: 137 LVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLH 196
LV+L + ++ +V EYV G + L P I+L YLH
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLH 179
Query: 197 EGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYAS 256
+++RD+K N+LID+ +V+DFG AK + T + GT Y+APE
Sbjct: 180 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIIL 232
Query: 257 TGMLNERSDVYSFGILIMEVISGRIPVDYSRP 288
+ N+ D ++ G+LI E+ +G P +P
Sbjct: 233 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 264
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 89/185 (48%), Gaps = 18/185 (9%)
Query: 105 KVAVKNL--LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
+VA+K + ++ +R + E++ + R RH+N++ + + Y+ +
Sbjct: 52 RVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM 110
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
E L+ + L+ + + +GL Y+H V+HRD+K SN+L++ + K
Sbjct: 111 ETDLYK-LLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLK 166
Query: 223 VSDFGLAKLLGSESSY--ITTRVMGTFGYVAPEYASTGMLNERS-----DVYSFGILIME 275
+ DFGLA++ + + T + T Y APE MLN + D++S G ++ E
Sbjct: 167 ICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI----MLNSKGYTKSIDIWSVGCILAE 222
Query: 276 VISGR 280
++S R
Sbjct: 223 MLSNR 227
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 11/152 (7%)
Query: 137 LVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLH 196
LV+L + ++ +V EYV G + L P I+L YLH
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLH 158
Query: 197 EGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYAS 256
+++RD+K N+LID+ +V+DFG AK + T + GT Y+APE
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIIL 211
Query: 257 TGMLNERSDVYSFGILIMEVISGRIPVDYSRP 288
+ N+ D ++ G+LI E+ +G P +P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 78/174 (44%), Gaps = 13/174 (7%)
Query: 113 NNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGP 172
+ RG + + + EV + ++H N++ L +L+ E V G L +L
Sbjct: 52 SRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AE 107
Query: 173 CSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK----VSDFGL 228
LT E + G+ YLH ++ H D+K NI++ PK + DFGL
Sbjct: 108 KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
Query: 229 AKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIP 282
A + + + + GT +VAPE + L +D++S G++ ++SG P
Sbjct: 165 AHKIDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Query: 188 TAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTF 247
T +G+ YLH +V+HRD+K N+ ++ + K+ DFGLA + + T + GT
Sbjct: 151 TIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT-LCGTP 206
Query: 248 GYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVDYS 286
Y+APE + D++S G ++ ++ G+ P + S
Sbjct: 207 NYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 89/185 (48%), Gaps = 18/185 (9%)
Query: 105 KVAVKNL--LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
+VA+K + ++ +R + E++ + R RH+N++ + + Y+ +
Sbjct: 50 RVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM 108
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
E L+ + L+ + + +GL Y+H V+HRD+K SN+L++ + K
Sbjct: 109 ETDLYK-LLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLK 164
Query: 223 VSDFGLAKLLGSESSY--ITTRVMGTFGYVAPEYASTGMLNERS-----DVYSFGILIME 275
+ DFGLA++ + + T + T Y APE MLN + D++S G ++ E
Sbjct: 165 ICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI----MLNSKGYTKSIDIWSVGCILAE 220
Query: 276 VISGR 280
++S R
Sbjct: 221 MLSNR 225
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 75/165 (45%), Gaps = 16/165 (9%)
Query: 125 EVEAIGRVR-HKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMN 183
EV+ + +V H N+++L LV++ + G L +L V T +I M
Sbjct: 73 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKI-MR 131
Query: 184 IILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRV 243
+L L L+ +VHRD+K NIL+D N K++DFG + L V
Sbjct: 132 ALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK--LREV 183
Query: 244 MGTFGYVAPEYASTGM------LNERSDVYSFGILIMEVISGRIP 282
GT Y+APE M + D++S G+++ +++G P
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 89/185 (48%), Gaps = 18/185 (9%)
Query: 105 KVAVKNL--LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
+VA+K + ++ +R + E++ + R RH+N++ + + Y+ +
Sbjct: 50 RVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM 108
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
E L+ + L+ + + +GL Y+H V+HRD+K SN+L++ + K
Sbjct: 109 ETDLYK-LLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLK 164
Query: 223 VSDFGLAKLLGSESSY--ITTRVMGTFGYVAPEYASTGMLNERS-----DVYSFGILIME 275
+ DFGLA++ + + T + T Y APE MLN + D++S G ++ E
Sbjct: 165 ICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI----MLNSKGYTKSIDIWSVGCILAE 220
Query: 276 VISGR 280
++S R
Sbjct: 221 MLSNR 225
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 83/185 (44%), Gaps = 15/185 (8%)
Query: 105 KVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
K+ K+LL Q E+ +E+ + H+++V G+ + +V E +L +
Sbjct: 46 KIVPKSLLLKPHQREK-MSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE 104
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVS 224
P I+LG YLH +V+HRD+K N+ +++ K+
Sbjct: 105 LHKRRKALTEPEARYYLRQIVLGC----QYLHRN---RVIHRDLKLGNLFLNEDLEVKIG 157
Query: 225 DFGLAKLLGSESSYITTR---VMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRI 281
DFGLA ++ Y R + GT Y+APE S + DV+S G ++ ++ G+
Sbjct: 158 DFGLA----TKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP 213
Query: 282 PVDYS 286
P + S
Sbjct: 214 PFETS 218
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 75/165 (45%), Gaps = 16/165 (9%)
Query: 125 EVEAIGRVR-HKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMN 183
EV+ + +V H N+++L LV++ + G L +L V T +I M
Sbjct: 60 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKI-MR 118
Query: 184 IILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRV 243
+L L L+ +VHRD+K NIL+D N K++DFG + L V
Sbjct: 119 ALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK--LREV 170
Query: 244 MGTFGYVAPEYASTGM------LNERSDVYSFGILIMEVISGRIP 282
GT Y+APE M + D++S G+++ +++G P
Sbjct: 171 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 215
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 89/185 (48%), Gaps = 18/185 (9%)
Query: 105 KVAVKNL--LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
+VA+K + ++ +R + E++ + R RH+N++ + + Y+ +
Sbjct: 54 RVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM 112
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
E L+ + L+ + + +GL Y+H V+HRD+K SN+L++ + K
Sbjct: 113 ETDLYK-LLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLK 168
Query: 223 VSDFGLAKLLGSESSY--ITTRVMGTFGYVAPEYASTGMLNERS-----DVYSFGILIME 275
+ DFGLA++ + + T + T Y APE MLN + D++S G ++ E
Sbjct: 169 ICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI----MLNSKGYTKSIDIWSVGCILAE 224
Query: 276 VISGR 280
++S R
Sbjct: 225 MLSNR 229
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 89/185 (48%), Gaps = 18/185 (9%)
Query: 105 KVAVKNL--LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
+VA+K + ++ +R + E++ + R RH+N++ + + Y+ +
Sbjct: 70 RVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM 128
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
E L+ + L+ + + +GL Y+H V+HRD+K SN+L++ + K
Sbjct: 129 ETDLYK-LLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLK 184
Query: 223 VSDFGLAKLLGSESSY--ITTRVMGTFGYVAPEYASTGMLNERS-----DVYSFGILIME 275
+ DFGLA++ + + T + T Y APE MLN + D++S G ++ E
Sbjct: 185 ICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI----MLNSKGYTKSIDIWSVGCILAE 240
Query: 276 VISGR 280
++S R
Sbjct: 241 MLSNR 245
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 78/174 (44%), Gaps = 13/174 (7%)
Query: 113 NNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGP 172
+ RG + + + EV + ++H N++ L +L+ E V G L +L
Sbjct: 52 SRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AE 107
Query: 173 CSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK----VSDFGL 228
LT E + G+ YLH ++ H D+K NI++ PK + DFGL
Sbjct: 108 KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
Query: 229 AKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIP 282
A + + + + GT +VAPE + L +D++S G++ ++SG P
Sbjct: 165 AHKIDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 78/174 (44%), Gaps = 13/174 (7%)
Query: 113 NNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGP 172
+ RG + + + EV + ++H N++ L +L+ E V G L +L
Sbjct: 52 SRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AE 107
Query: 173 CSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK----VSDFGL 228
LT E + G+ YLH ++ H D+K NI++ PK + DFGL
Sbjct: 108 KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
Query: 229 AKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIP 282
A + + + + GT +VAPE + L +D++S G++ ++SG P
Sbjct: 165 AHKIDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 110/242 (45%), Gaps = 29/242 (11%)
Query: 120 REFKVEVEAIGRVRHKNLVRLLGYCAE--GAHRMLVYEYVNNGNLEQWLHGDVGPCSPLT 177
R+F E + H N++ +LG C H L+ ++ G+L LH +
Sbjct: 52 RDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQS 111
Query: 178 WEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESS 237
++ L A+G+++LH LEP + + S +++ID+ ++S + + S
Sbjct: 112 QAVK--FALDMARGMAFLHT-LEPLIPRHALNSRSVMIDEDMTARIS------MADVKFS 162
Query: 238 YITTRVMGTFGYVAPEYASTGM--LNERS-DVYSFGILIMEVISGRIPVDYSRPPEEVNL 294
+ + M +VAPE N RS D++SF +L+ E+++ +P +++
Sbjct: 163 FQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPF------ADLSN 216
Query: 295 IEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNAQKRPKMGHVVHMLEA 354
+E K+ EG L P +P + + K + + C++ + KRPK +V +LE
Sbjct: 217 MEIGMKVAL----EG-LRPTIPPGISPHVSKLMKI----CMNEDPAKRPKFDMIVPILEK 267
Query: 355 QE 356
+
Sbjct: 268 MQ 269
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 11/152 (7%)
Query: 137 LVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLH 196
LV+L + ++ +V EYV G + L P I+L YLH
Sbjct: 89 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLH 144
Query: 197 EGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYAS 256
+++RD+K N+LID+ +V+DFG AK + T + GT Y+APE
Sbjct: 145 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWTLCGTPEYLAPEIIL 197
Query: 257 TGMLNERSDVYSFGILIMEVISGRIPVDYSRP 288
+ N+ D ++ G+LI E+ +G P +P
Sbjct: 198 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 229
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 11/152 (7%)
Query: 137 LVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLH 196
LV+L + ++ +V EYV G + L P I+L YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLT----FEYLH 158
Query: 197 EGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYAS 256
+++RD+K N+LID+ +V+DFG AK + T + GT Y+APE
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIIL 211
Query: 257 TGMLNERSDVYSFGILIMEVISGRIPVDYSRP 288
+ N+ D ++ G+LI E+ +G P +P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 11/152 (7%)
Query: 137 LVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLH 196
LV+L + ++ +V EYV G + L P I+L YLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLT----FEYLH 159
Query: 197 EGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYAS 256
+++RD+K N+LID+ +V+DFG AK + T + GT Y+APE
Sbjct: 160 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIIL 212
Query: 257 TGMLNERSDVYSFGILIMEVISGRIPVDYSRP 288
+ N+ D ++ G+LI E+ +G P +P
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 11/152 (7%)
Query: 137 LVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLH 196
LV+L + ++ +V EYV G + L P I+L YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLT----FEYLH 158
Query: 197 EGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYAS 256
+++RD+K N+LID+ +V+DFG AK + T + GT Y+APE
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIIL 211
Query: 257 TGMLNERSDVYSFGILIMEVISGRIPVDYSRP 288
+ N+ D ++ G+LI E+ +G P +P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 89/185 (48%), Gaps = 18/185 (9%)
Query: 105 KVAVKNL--LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
+VA+K + ++ +R + E++ + R RH+N++ + + Y+ +
Sbjct: 50 RVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM 108
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
E L+ + L+ + + +GL Y+H V+HRD+K SN+L++ + K
Sbjct: 109 ETDLYK-LLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLK 164
Query: 223 VSDFGLAKLLGSESSY--ITTRVMGTFGYVAPEYASTGMLNERS-----DVYSFGILIME 275
+ DFGLA++ + + T + T Y APE MLN + D++S G ++ E
Sbjct: 165 IXDFGLARVADPDHDHTGFLTEYVATRWYRAPEI----MLNSKGYTKSIDIWSVGCILAE 220
Query: 276 VISGR 280
++S R
Sbjct: 221 MLSNR 225
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 11/152 (7%)
Query: 137 LVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLH 196
LV+L + ++ +V EYV G + L P I+L YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLH 158
Query: 197 EGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYAS 256
+++RD+K N++ID+ +V+DFG AK + T + GT Y+APE
Sbjct: 159 S---LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIII 211
Query: 257 TGMLNERSDVYSFGILIMEVISGRIPVDYSRP 288
+ N+ D ++ G+LI E+ +G P +P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 69/159 (43%), Gaps = 9/159 (5%)
Query: 129 IGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGT 188
+ V+H LV L V +Y+N G L L + P I
Sbjct: 93 LKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEI---- 148
Query: 189 AKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFG 248
A L YLH +V+RD+K NIL+D + ++DFGL K E + T+ GT
Sbjct: 149 ASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCK-ENIEHNSTTSTFCGTPE 204
Query: 249 YVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVDYSR 287
Y+APE + D + G ++ E++ G +P YSR
Sbjct: 205 YLAPEVLHKQPYDRTVDWWCLGAVLYEMLYG-LPPFYSR 242
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 75/165 (45%), Gaps = 16/165 (9%)
Query: 125 EVEAIGRVR-HKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMN 183
EV+ + +V H N+++L LV++ + G L +L V T +I M
Sbjct: 73 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKI-MR 131
Query: 184 IILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRV 243
+L L L+ +VHRD+K NIL+D N K++DFG + L V
Sbjct: 132 ALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK--LRSV 183
Query: 244 MGTFGYVAPEYASTGM------LNERSDVYSFGILIMEVISGRIP 282
GT Y+APE M + D++S G+++ +++G P
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 14/98 (14%)
Query: 190 KGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSY--ITTRVMGTF 247
+GL Y+H V+HRD+K SN+L++ + K+ DFGLA++ + + T + T
Sbjct: 139 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 248 GYVAPEYASTGMLNERS-----DVYSFGILIMEVISGR 280
Y APE MLN + D++S G ++ E++S R
Sbjct: 196 WYRAPEI----MLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 11/152 (7%)
Query: 137 LVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLH 196
LV+L + ++ +V EYV G + L P I+L YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLH 158
Query: 197 EGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYAS 256
+++RD+K N+LID+ +V+DFG AK + T + GT Y+APE
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIIL 211
Query: 257 TGMLNERSDVYSFGILIMEVISGRIPVDYSRP 288
+ N+ D ++ G+LI ++ +G P +P
Sbjct: 212 SKGYNKAVDWWALGVLIYQMAAGYPPFFADQP 243
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 84/180 (46%), Gaps = 10/180 (5%)
Query: 106 VAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQW 165
A K ++ + + E++ + +RH LV L + +++YE+++ G L +
Sbjct: 185 FAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEK 244
Query: 166 LHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILI-DKHWNP-KV 223
+ + + ++ + + + KGL ++HE VH D+K NI+ K N K+
Sbjct: 245 VADE---HNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKL 298
Query: 224 SDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPV 283
DFGL L + S T GT + APE A + +D++S G+L ++SG P
Sbjct: 299 IDFGLTAHLDPKQSVKVT--TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPF 356
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 11/152 (7%)
Query: 137 LVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLH 196
LV+L + ++ +V EYV G + L P I+L YLH
Sbjct: 96 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLT----FEYLH 151
Query: 197 EGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYAS 256
+++RD+K N+LID+ +V+DFG AK + T + GT Y+APE
Sbjct: 152 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIIL 204
Query: 257 TGMLNERSDVYSFGILIMEVISGRIPVDYSRP 288
+ N+ D ++ G+LI E+ +G P +P
Sbjct: 205 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 236
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 85/182 (46%), Gaps = 12/182 (6%)
Query: 105 KVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRM-LVYEYVNNGNLE 163
KV K + + + + E + + +R + L Y + ++ L+ +Y+N G L
Sbjct: 88 KVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELF 147
Query: 164 QWLHGDVGPCSPLTWEIRMNIILG-TAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
L E + I +G L +LH+ +++RDIK NIL+D + +
Sbjct: 148 THL-----SQRERFTEHEVQIYVGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVV 199
Query: 223 VSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGML--NERSDVYSFGILIMEVISGR 280
++DFGL+K ++ + GT Y+AP+ G ++ D +S G+L+ E+++G
Sbjct: 200 LTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGA 259
Query: 281 IP 282
P
Sbjct: 260 SP 261
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 14/98 (14%)
Query: 190 KGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSY--ITTRVMGTF 247
+GL Y+H V+HRD+K SN+L++ + K+ DFGLA++ + + T + T
Sbjct: 137 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 248 GYVAPEYASTGMLNERS-----DVYSFGILIMEVISGR 280
Y APE MLN + D++S G ++ E++S R
Sbjct: 194 WYRAPEI----MLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 77/172 (44%), Gaps = 13/172 (7%)
Query: 115 RGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCS 174
RG + + + EV + ++H N++ L +L+ E V G L +L
Sbjct: 54 RGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKE 109
Query: 175 PLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK----VSDFGLAK 230
LT E + G+ YLH ++ H D+K NI++ PK + DFGLA
Sbjct: 110 SLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166
Query: 231 LLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIP 282
+ + + + GT +VAPE + L +D++S G++ ++SG P
Sbjct: 167 KIDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 78/174 (44%), Gaps = 13/174 (7%)
Query: 113 NNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGP 172
+ RG + + + EV + ++H N++ L +L+ E V G L +L
Sbjct: 52 SRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AE 107
Query: 173 CSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK----VSDFGL 228
LT E + G+ YLH ++ H D+K NI++ PK + DFGL
Sbjct: 108 KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
Query: 229 AKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIP 282
A + + + + GT +VAPE + L +D++S G++ ++SG P
Sbjct: 165 AHKIDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 84/181 (46%), Gaps = 14/181 (7%)
Query: 105 KVAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
KVAVK L + A R ++ E+ + ++H+N++ LL E
Sbjct: 55 KVAVKKLSRPFQSLIHARRTYR-ELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTT 113
Query: 162 LEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
L ++ L+ E ++ +GL Y+H ++HRD+K SN+ +++
Sbjct: 114 LMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDSEL 170
Query: 222 KVSDFGLAKLLGSE-SSYITTRVMGTFGYVAPEYASTGM-LNERSDVYSFGILIMEVISG 279
++ DFGLA+ E + Y+ TR Y APE M N+ D++S G ++ E++ G
Sbjct: 171 RILDFGLARQADEEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQG 225
Query: 280 R 280
+
Sbjct: 226 K 226
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 78/174 (44%), Gaps = 13/174 (7%)
Query: 113 NNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGP 172
+ RG + + + EV + ++H N++ L +L+ E V G L +L
Sbjct: 52 SRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AE 107
Query: 173 CSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK----VSDFGL 228
LT E + G+ YLH ++ H D+K NI++ PK + DFGL
Sbjct: 108 KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
Query: 229 AKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIP 282
A + + + + GT +VAPE + L +D++S G++ ++SG P
Sbjct: 165 AHKIDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 79/174 (45%), Gaps = 10/174 (5%)
Query: 106 VAVKNLLNNRGQAERE-FKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQ 164
VA+K N + RE F E + + H ++V+L+G E ++ E G L
Sbjct: 41 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRS 99
Query: 165 WLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPK-VVHRDIKSSNILIDKHWNPKV 223
+L + + + ++ A LS LE K VHRDI + N+L+ + K+
Sbjct: 100 FLQVR-------KFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKL 152
Query: 224 SDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVI 277
DFGL++ + + ++ ++APE + SDV+ FG+ + E++
Sbjct: 153 GDFGLSRYMEDSTXXKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 89/185 (48%), Gaps = 18/185 (9%)
Query: 105 KVAVKNL--LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
+VA+K + ++ +R + E++ + R RH+N++ + + Y+ +
Sbjct: 54 RVAIKKISPFEHQTYXQRTLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM 112
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
E L+ + L+ + + +GL Y+H V+HRD+K SN+L++ + K
Sbjct: 113 ETDLYK-LLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLK 168
Query: 223 VSDFGLAKLLGSESSY--ITTRVMGTFGYVAPEYASTGMLNERS-----DVYSFGILIME 275
+ DFGLA++ + + T + T Y APE MLN + D++S G ++ E
Sbjct: 169 ICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI----MLNSKGYTKSIDIWSVGCILAE 224
Query: 276 VISGR 280
++S R
Sbjct: 225 MLSNR 229
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 11/152 (7%)
Query: 137 LVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLH 196
LV+L + ++ +V EY G + L P I+L YLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLH 159
Query: 197 EGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYAS 256
+++RD+K N++ID+ KV+DFG AK + T + GT Y+APE
Sbjct: 160 S---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLAPEIIL 212
Query: 257 TGMLNERSDVYSFGILIMEVISGRIPVDYSRP 288
+ N+ D ++ G+LI E+ +G P +P
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 78/175 (44%), Gaps = 13/175 (7%)
Query: 113 NNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGP 172
+ RG + + + EV + ++H N++ L +L+ E V G L +L
Sbjct: 52 SRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFL----AE 107
Query: 173 CSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK----VSDFGL 228
LT E + G+ YLH ++ H D+K NI++ PK + DFGL
Sbjct: 108 KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
Query: 229 AKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPV 283
A + + + + GT +VAPE + L +D++S G++ ++SG P
Sbjct: 165 AHKIDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 11/152 (7%)
Query: 137 LVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLH 196
LV+L + ++ +V EY G + L P I+L YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLH 158
Query: 197 EGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYAS 256
+++RD+K N++ID+ KV+DFG AK + T + GT Y+APE
Sbjct: 159 S---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLAPEIIL 211
Query: 257 TGMLNERSDVYSFGILIMEVISGRIPVDYSRP 288
+ N+ D ++ G+LI E+ +G P +P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 93/194 (47%), Gaps = 12/194 (6%)
Query: 105 KVAVKNLLNNRGQAERE-FKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLE 163
K+A K ++ RG ++E K E+ + ++ H NL++L +LV EYV+ G L
Sbjct: 116 KLAAK-IIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELF 174
Query: 164 QWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNIL-IDKHWNP- 221
+ + + L + M I +G+ ++H+ ++H D+K NIL +++
Sbjct: 175 DRIIDESYNLTELDTILFMKQI---CEGIRHMHQMY---ILHLDLKPENILCVNRDAKQI 228
Query: 222 KVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRI 281
K+ DFGLA+ GT ++APE + ++ +D++S G++ ++SG
Sbjct: 229 KIIDFGLARRYKPREKLKVN--FGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLS 286
Query: 282 PVDYSRPPEEVNLI 295
P E +N I
Sbjct: 287 PFLGDNDAETLNNI 300
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 27/168 (16%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL-EQWLHGDVGPCSPLTWEIRMN 183
EV + + H N+++L + + + LV E G L ++ +H ++ N
Sbjct: 86 EVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIH-----------RMKFN 134
Query: 184 ------IILGTAKGLSYLHEGLEPKVVHRDIKSSNILI---DKHWNPKVSDFGLAKLLGS 234
II G++YLH+ +VHRD+K N+L+ +K K+ DFGL+ +
Sbjct: 135 EVDAAVIIKQVLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVF-- 189
Query: 235 ESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIP 282
E+ +GT Y+APE +E+ DV+S G+++ +++G P
Sbjct: 190 ENQKKMKERLGTAYYIAPEVLRKKY-DEKCDVWSIGVILFILLAGYPP 236
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 14/98 (14%)
Query: 190 KGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSY--ITTRVMGTF 247
+GL Y+H V+HRD+K SN+L++ + K+ DFGLA++ + + T + T
Sbjct: 155 RGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 211
Query: 248 GYVAPEYASTGMLNERS-----DVYSFGILIMEVISGR 280
Y APE MLN + D++S G ++ E++S R
Sbjct: 212 WYRAPEI----MLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 11/152 (7%)
Query: 137 LVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLH 196
LV+L + ++ +V EY G + L P I+L YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLH 158
Query: 197 EGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYAS 256
+++RD+K N++ID+ +V+DFGLAK + T + GT Y+APE
Sbjct: 159 S---LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGR----TWXLCGTPEYLAPEIIL 211
Query: 257 TGMLNERSDVYSFGILIMEVISGRIPVDYSRP 288
+ N+ D ++ G+LI E+ +G P +P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Query: 176 LTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSE 235
LT E + AKG+ +L K +HRD+ + NIL+ + K+ DFGLA+ + +
Sbjct: 195 LTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 251
Query: 236 SSYITT-RVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS 278
Y+ ++APE + +SDV+SFG+L+ E+ S
Sbjct: 252 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 106 VAVKNLLNNRGQAE-REFKVEVEAIGRV-RHKNLVRLLGYCAE-GAHRMLVYEYVNNGNL 162
VAVK L +E R E++ + + H N+V LLG C + G M++ E+ GNL
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 163 EQWL 166
+L
Sbjct: 120 STYL 123
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 7/97 (7%)
Query: 192 LSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVA 251
YLH +++RD+K N++ID+ KV+DFG AK + T + GT Y+A
Sbjct: 154 FEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLA 206
Query: 252 PEYASTGMLNERSDVYSFGILIMEVISGRIPVDYSRP 288
PE + N+ D ++ G+LI E+ +G P +P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 7/97 (7%)
Query: 192 LSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVA 251
YLH +++RD+K N++ID+ KV+DFG AK + T + GT Y+A
Sbjct: 155 FEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLA 207
Query: 252 PEYASTGMLNERSDVYSFGILIMEVISGRIPVDYSRP 288
PE + N+ D ++ G+LI E+ +G P +P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 14/98 (14%)
Query: 190 KGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSY--ITTRVMGTF 247
+GL Y+H V+HRD+K SN+L++ + K+ DFGLA++ + + T + T
Sbjct: 137 RGLKYIHSA---NVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 248 GYVAPEYASTGMLNERS-----DVYSFGILIMEVISGR 280
Y APE MLN + D++S G ++ E++S R
Sbjct: 194 WYRAPEI----MLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 7/97 (7%)
Query: 192 LSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVA 251
YLH +++RD+K N++ID+ KV+DFG AK + T + GT Y+A
Sbjct: 155 FEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLA 207
Query: 252 PEYASTGMLNERSDVYSFGILIMEVISGRIPVDYSRP 288
PE + N+ D ++ G+LI E+ +G P +P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 7/97 (7%)
Query: 192 LSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVA 251
YLH +++RD+K N++ID+ KV+DFG AK + T + GT Y+A
Sbjct: 155 FEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLA 207
Query: 252 PEYASTGMLNERSDVYSFGILIMEVISGRIPVDYSRP 288
PE + N+ D ++ G+LI E+ +G P +P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Query: 176 LTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSE 235
LT E + AKG+ +L K +HRD+ + NIL+ + K+ DFGLA+ + +
Sbjct: 197 LTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 253
Query: 236 SSYITT-RVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS 278
Y+ ++APE + +SDV+SFG+L+ E+ S
Sbjct: 254 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 106 VAVKNLLNNRGQAE-REFKVEVEAIGRV-RHKNLVRLLGYCAE-GAHRMLVYEYVNNGNL 162
VAVK L +E R E++ + + H N+V LLG C + G M++ E+ GNL
Sbjct: 62 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 121
Query: 163 EQWL 166
+L
Sbjct: 122 STYL 125
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Query: 176 LTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSE 235
LT E + AKG+ +L K +HRD+ + NIL+ + K+ DFGLA+ + +
Sbjct: 190 LTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 246
Query: 236 SSYITT-RVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS 278
Y+ ++APE + +SDV+SFG+L+ E+ S
Sbjct: 247 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 106 VAVKNLLNNRGQAE-REFKVEVEAIGRV-RHKNLVRLLGYCAE-GAHRMLVYEYVNNGNL 162
VAVK L +E R E++ + + H N+V LLG C + G M++ E+ GNL
Sbjct: 55 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 114
Query: 163 EQWL 166
+L
Sbjct: 115 STYL 118
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Query: 188 TAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTF 247
T +G+ YLH +V+HRD+K N+ ++ + K+ DFGLA + + + GT
Sbjct: 151 TIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER-KKXLCGTP 206
Query: 248 GYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVDYS 286
Y+APE + D++S G ++ ++ G+ P + S
Sbjct: 207 NYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 11/152 (7%)
Query: 137 LVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLH 196
LV+L + ++ +V EYV G + L P I+L YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLH 158
Query: 197 EGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYAS 256
+++RD+K N+LID+ +V+DFG AK + T + GT Y+AP
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPAIIL 211
Query: 257 TGMLNERSDVYSFGILIMEVISGRIPVDYSRP 288
+ N+ D ++ G+LI E+ +G P +P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Query: 188 TAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTF 247
T +G+ YLH +V+HRD+K N+ ++ + K+ DFGLA + + + GT
Sbjct: 135 TIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER-KKDLCGTP 190
Query: 248 GYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVDYS 286
Y+APE + D++S G ++ ++ G+ P + S
Sbjct: 191 NYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 229
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Query: 176 LTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSE 235
LT E + AKG+ +L K +HRD+ + NIL+ + K+ DFGLA+ + +
Sbjct: 188 LTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 244
Query: 236 SSYITT-RVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS 278
Y+ ++APE + +SDV+SFG+L+ E+ S
Sbjct: 245 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 106 VAVKNLLNNRGQAE-REFKVEVEAIGRV-RHKNLVRLLGYCAE-GAHRMLVYEYVNNGNL 162
VAVK L +E R E++ + + H N+V LLG C + G M++ E+ GNL
Sbjct: 53 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 112
Query: 163 EQWL 166
+L
Sbjct: 113 STYL 116
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Query: 188 TAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTF 247
T +G+ YLH +V+HRD+K N+ ++ + K+ DFGLA + + + GT
Sbjct: 151 TIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER-KKDLCGTP 206
Query: 248 GYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVDYS 286
Y+APE + D++S G ++ ++ G+ P + S
Sbjct: 207 NYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 85/177 (48%), Gaps = 19/177 (10%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMN- 183
EV + ++H N+V L LV+EY++ +L+Q+L D G I M+
Sbjct: 50 EVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDK-DLKQYL-DDCGNI------INMHN 101
Query: 184 ---IILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYIT 240
+ +GL+Y H KV+HRD+K N+LI++ K++DFGLA+ +
Sbjct: 102 VKLFLFQLLRGLAYCHR---QKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYD 158
Query: 241 TRVMGTFGYVAPE--YASTGMLNERSDVYSFGILIMEVISGRIPVDYSRPPEEVNLI 295
V+ T Y P+ ST + + D++ G + E+ +GR S E+++ I
Sbjct: 159 NEVV-TLWYRPPDILLGSTDY-STQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFI 213
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 88/185 (47%), Gaps = 18/185 (9%)
Query: 105 KVAVKNL--LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
+VA+K + ++ +R + E++ + R RH+N++ + + Y+ +
Sbjct: 54 RVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM 112
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
E L+ + L+ + + +GL Y+H V+HRD+K SN+L++ + K
Sbjct: 113 ETDLYK-LLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLK 168
Query: 223 VSDFGLAKLLGSESSY--ITTRVMGTFGYVAPEYASTGMLNERS-----DVYSFGILIME 275
+ DFGLA++ + + + T Y APE MLN + D++S G ++ E
Sbjct: 169 ICDFGLARVADPDHDHTGFLXEXVATRWYRAPEI----MLNSKGYTKSIDIWSVGCILAE 224
Query: 276 VISGR 280
++S R
Sbjct: 225 MLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 88/185 (47%), Gaps = 18/185 (9%)
Query: 105 KVAVKNL--LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL 162
+VA+K + ++ +R + E++ + R RH+N++ + + Y+ +
Sbjct: 55 RVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM 113
Query: 163 EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPK 222
E L+ + L+ + + +GL Y+H V+HRD+K SN+L++ + K
Sbjct: 114 ETDLYK-LLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLK 169
Query: 223 VSDFGLAKLLGSESSY--ITTRVMGTFGYVAPEYASTGMLNERS-----DVYSFGILIME 275
+ DFGLA++ + + + T Y APE MLN + D++S G ++ E
Sbjct: 170 ICDFGLARVADPDHDHTGFLXEXVATRWYRAPEI----MLNSKGYTKSIDIWSVGCILAE 225
Query: 276 VISGR 280
++S R
Sbjct: 226 MLSNR 230
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 86/185 (46%), Gaps = 29/185 (15%)
Query: 111 LLNNRGQAEREF-KVEVEA--IGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL----- 162
++N + + R+F K+E EA +++H N+VRL E + LV++ V G L
Sbjct: 37 IINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV 96
Query: 163 --EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILI---DK 217
E + D C I + ++Y H +VHR++K N+L+ K
Sbjct: 97 AREFYSEADASHC-----------IQQILESIAYCHSN---GIVHRNLKPENLLLASKAK 142
Query: 218 HWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVI 277
K++DFGLA + ++ GT GY++PE ++ D+++ G+++ ++
Sbjct: 143 GAAVKLADFGLAIEVNDSEAW--HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILL 200
Query: 278 SGRIP 282
G P
Sbjct: 201 VGYPP 205
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 86/185 (46%), Gaps = 29/185 (15%)
Query: 111 LLNNRGQAEREF-KVEVEA--IGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL----- 162
++N + + R+F K+E EA +++H N+VRL E + LV++ V G L
Sbjct: 38 IINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV 97
Query: 163 --EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILI---DK 217
E + D C I + ++Y H +VHR++K N+L+ K
Sbjct: 98 AREFYSEADASHC-----------IQQILESIAYCHSN---GIVHRNLKPENLLLASKAK 143
Query: 218 HWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVI 277
K++DFGLA + ++ GT GY++PE ++ D+++ G+++ ++
Sbjct: 144 GAAVKLADFGLAIEVNDSEAW--HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILL 201
Query: 278 SGRIP 282
G P
Sbjct: 202 VGYPP 206
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 86/185 (46%), Gaps = 29/185 (15%)
Query: 111 LLNNRGQAEREF-KVEVEA--IGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL----- 162
++N + + R+F K+E EA +++H N+VRL E + LV++ V G L
Sbjct: 38 IINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV 97
Query: 163 --EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILI---DK 217
E + D C I + ++Y H +VHR++K N+L+ K
Sbjct: 98 AREFYSEADASHC-----------IQQILESIAYCHSN---GIVHRNLKPENLLLASKAK 143
Query: 218 HWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVI 277
K++DFGLA + ++ GT GY++PE ++ D+++ G+++ ++
Sbjct: 144 GAAVKLADFGLAIEVNDSEAW--HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILL 201
Query: 278 SGRIP 282
G P
Sbjct: 202 VGYPP 206
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 87/191 (45%), Gaps = 17/191 (8%)
Query: 106 VAVKNLLNNRGQAEREFKVEVEAIGR--VRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLE 163
VAVK + RG A E V+ E I +RH N+VR H ++ EY + G L
Sbjct: 48 VAVKYI--ERGAAIDE-NVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELY 104
Query: 164 QWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP-- 221
+ + + G S +L G+SY H ++ HRD+K N L+D P
Sbjct: 105 ERI-CNAGRFSEDEARFFFQQLLS---GVSYCHSM---QICHRDLKLENTLLDGSPAPRL 157
Query: 222 KVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNER-SDVYSFGILIMEVISGR 280
K+ DFG +K S +T +GT Y+APE + + +DV+S G+ + ++ G
Sbjct: 158 KICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGA 215
Query: 281 IPVDYSRPPEE 291
P + P +
Sbjct: 216 YPFEDPEEPRD 226
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 11/152 (7%)
Query: 137 LVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLH 196
LV+L + ++ +V EY G + L P I+L YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLH 158
Query: 197 EGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYAS 256
+++RD+K N++ID+ +V+DFG AK + T + GT Y+APE
Sbjct: 159 S---LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIIL 211
Query: 257 TGMLNERSDVYSFGILIMEVISGRIPVDYSRP 288
+ N+ D ++ G+LI E+ +G P +P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 79/157 (50%), Gaps = 9/157 (5%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E+ + + H N+V L+ LV+E++ +L++ L + +I +
Sbjct: 69 EISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQ 127
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVM 244
+L +G+++ H+ +++HRD+K N+LI+ K++DFGLA+ G T V+
Sbjct: 128 LL---RGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV 181
Query: 245 GTFGYVAPE-YASTGMLNERSDVYSFGILIMEVISGR 280
T Y AP+ + + D++S G + E+I+G+
Sbjct: 182 -TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 17/204 (8%)
Query: 103 NSKVAVKNLLNNRGQA-EREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
N VAVK + RG+ + K E+ +RH N+VR H +V EY + G
Sbjct: 43 NELVAVKYI--ERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGE 100
Query: 162 LEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
L + + + G S ++ G+SY H +V HRD+K N L+D P
Sbjct: 101 LFERI-CNAGRFSEDEARFFFQQLIS---GVSYCHAM---QVCHRDLKLENTLLDGSPAP 153
Query: 222 --KVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNER-SDVYSFGILIMEVIS 278
K+ DFG +K S +T +GT Y+APE + + +DV+S G+ + ++
Sbjct: 154 RLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLV 211
Query: 279 GRIPVDYSRPPEEVNLIEWLKKMV 302
G P + P E N + + +++
Sbjct: 212 GAYP--FEDPEEPKNFRKTIHRIL 233
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 21/206 (10%)
Query: 103 NSKVAVKNLLNNRGQA-EREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
N VAVK + RG+ + K E+ +RH N+VR H +V EY + G
Sbjct: 44 NELVAVKYI--ERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGE 101
Query: 162 LEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
L + + + G S ++ G+SY H +V HRD+K N L+D P
Sbjct: 102 LFERI-CNAGRFSEDEARFFFQQLIS---GVSYAHAM---QVAHRDLKLENTLLDGSPAP 154
Query: 222 --KVSDFGLAK--LLGSESSYITTRVMGTFGYVAPEYASTGMLNER-SDVYSFGILIMEV 276
K++DFG +K +L S+ +GT Y+APE + + +DV+S G+ + +
Sbjct: 155 RLKIADFGYSKASVLHSQPK----SAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVM 210
Query: 277 ISGRIPVDYSRPPEEVNLIEWLKKMV 302
+ G P + P E N + + +++
Sbjct: 211 LVGAYP--FEDPEEPKNFRKTIHRIL 234
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 79/157 (50%), Gaps = 9/157 (5%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E+ + + H N+V L+ LV+E++ +L++ L + +I +
Sbjct: 69 EISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQ 127
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVM 244
+L +G+++ H+ +++HRD+K N+LI+ K++DFGLA+ G T V+
Sbjct: 128 LL---RGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV 181
Query: 245 GTFGYVAPE-YASTGMLNERSDVYSFGILIMEVISGR 280
T Y AP+ + + D++S G + E+I+G+
Sbjct: 182 -TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 86/185 (46%), Gaps = 29/185 (15%)
Query: 111 LLNNRGQAEREF-KVEVEA--IGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL----- 162
++N + + R+F K+E EA +++H N+VRL E + LV++ V G L
Sbjct: 61 IINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV 120
Query: 163 --EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILI---DK 217
E + D C I + ++Y H +VHR++K N+L+ K
Sbjct: 121 AREFYSEADASHC-----------IQQILESIAYCHSN---GIVHRNLKPENLLLASKAK 166
Query: 218 HWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVI 277
K++DFGLA + ++ GT GY++PE ++ D+++ G+++ ++
Sbjct: 167 GAAVKLADFGLAIEVNDSEAW--HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILL 224
Query: 278 SGRIP 282
G P
Sbjct: 225 VGYPP 229
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 89/190 (46%), Gaps = 28/190 (14%)
Query: 103 NSKVAVKNL---LNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCA------EGAHRMLV 153
+KVA+K L + A+R ++ E+ + +RH+N++ LL + LV
Sbjct: 50 GAKVAIKKLYRPFQSELFAKRAYR-ELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLV 108
Query: 154 YEYVNNGNLEQWLHGDVGPCSPLTWEIRMN-IILGTAKGLSYLHEGLEPKVVHRDIKSSN 212
++ + H +G E R+ ++ KGL Y+H ++HRD+K N
Sbjct: 109 MPFMGTDLGKLMKHEKLG-------EDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGN 158
Query: 213 ILIDKHWNPKVSDFGLAKLLGSE-SSYITTRVMGTFGYVAPEYASTGM-LNERSDVYSFG 270
+ +++ K+ DFGLA+ SE + TR Y APE M + D++S G
Sbjct: 159 LAVNEDCELKILDFGLARQADSEMXGXVVTR-----WYRAPEVILNWMRYTQTVDIWSVG 213
Query: 271 ILIMEVISGR 280
++ E+I+G+
Sbjct: 214 CIMAEMITGK 223
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 11/152 (7%)
Query: 137 LVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLH 196
LV+L + ++ +V EYV G + L P I+L YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLH 158
Query: 197 EGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYAS 256
+++RD+K N+LID+ +V+DFG AK + T + GT +APE
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEALAPEIIL 211
Query: 257 TGMLNERSDVYSFGILIMEVISGRIPVDYSRP 288
+ N+ D ++ G+LI E+ +G P +P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 75/172 (43%), Gaps = 11/172 (6%)
Query: 118 AEREFKVEVEAIGRVRHKNLVRLLG--YCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSP 175
E K E++ + R+RHKN+++L+ Y E +V EY G E D P
Sbjct: 49 GEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEML---DSVPEKR 105
Query: 176 LTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSE 235
GL YLH +VH+DIK N+L+ K+S G+A+ L
Sbjct: 106 FPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEALHPF 162
Query: 236 SSYITTRV-MGTFGYVAPEYAS--TGMLNERSDVYSFGILIMEVISGRIPVD 284
++ T R G+ + PE A+ + D++S G+ + + +G P +
Sbjct: 163 AADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFE 214
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 80/187 (42%), Gaps = 21/187 (11%)
Query: 106 VAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQW 165
V V ++ G + + K E ++H ++V LL + +V+E+++ +L
Sbjct: 59 VDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADL--- 115
Query: 166 LHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEP-------KVVHRDIKSSNILIDKH 218
C + + A Y+ + LE ++HRD+K +L+
Sbjct: 116 -------CFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASK 168
Query: 219 WNP---KVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIME 275
N K+ FG+A LG ES + +GT ++APE + DV+ G+++
Sbjct: 169 ENSAPVKLGGFGVAIQLG-ESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFI 227
Query: 276 VISGRIP 282
++SG +P
Sbjct: 228 LLSGCLP 234
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 80/187 (42%), Gaps = 21/187 (11%)
Query: 106 VAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQW 165
V V ++ G + + K E ++H ++V LL + +V+E+++ +L
Sbjct: 57 VDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADL--- 113
Query: 166 LHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEP-------KVVHRDIKSSNILIDKH 218
C + + A Y+ + LE ++HRD+K +L+
Sbjct: 114 -------CFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASK 166
Query: 219 WNP---KVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIME 275
N K+ FG+A LG ES + +GT ++APE + DV+ G+++
Sbjct: 167 ENSAPVKLGGFGVAIQLG-ESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFI 225
Query: 276 VISGRIP 282
++SG +P
Sbjct: 226 LLSGCLP 232
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 92/204 (45%), Gaps = 17/204 (8%)
Query: 103 NSKVAVKNLLNNRGQA-EREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
N VAVK + RG+ K E+ +RH N+VR H +V EY + G
Sbjct: 44 NELVAVKYI--ERGEKIAANVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGE 101
Query: 162 LEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
L + + + G S ++ G+SY H +V HRD+K N L+D P
Sbjct: 102 LFERI-CNAGRFSEDEARFFFQQLIS---GVSYCHAM---QVCHRDLKLENTLLDGSPAP 154
Query: 222 --KVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNER-SDVYSFGILIMEVIS 278
K+ DFG +K S +T +GT Y+APE + + +DV+S G+ + ++
Sbjct: 155 RLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLV 212
Query: 279 GRIPVDYSRPPEEVNLIEWLKKMV 302
G P + P E N + + +++
Sbjct: 213 GAYP--FEDPEEPKNFRKTIHRIL 234
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 76/166 (45%), Gaps = 18/166 (10%)
Query: 123 KVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRM 182
+ E+ + R+ H N+++L LV E V G L + + G S +
Sbjct: 96 RTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIV-EKGYYSERDAADAV 154
Query: 183 NIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP------KVSDFGLAKLLGSES 236
IL + ++YLHE +VHRD+K N+L + P K++DFGL+K++ E
Sbjct: 155 KQIL---EAVAYLHEN---GIVHRDLKPENLL---YATPAPDAPLKIADFGLSKIV--EH 203
Query: 237 SYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIP 282
+ V GT GY APE D++S GI+ ++ G P
Sbjct: 204 QVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEP 249
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 203 VVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYAST----G 258
++HRD+K N+L+DKH + K++DFG + +GT Y++PE + G
Sbjct: 195 LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQGGDG 254
Query: 259 MLNERSDVYSFGILIMEVISGRIPV 283
D +S G+ + E++ G P
Sbjct: 255 YYGRECDWWSVGVFLFEMLVGDTPF 279
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 91/202 (45%), Gaps = 37/202 (18%)
Query: 106 VAVKNLLN---NRGQAEREFKVEVEAIGRVR-HKNLVRLLGYCAEGAHR--MLVYEYVNN 159
VAVK + + N A+R F+ E+ + + H+N+V LL R LV++Y
Sbjct: 37 VAVKKIFDAFQNSTDAQRTFR-EIMILTELSGHENIVNLLNVLRADNDRDVYLVFDY--- 92
Query: 160 GNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHW 219
+E LH V + L + ++ K + YLH G ++HRD+K SNIL++
Sbjct: 93 --METDLHA-VIRANILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAEC 146
Query: 220 NPKVSDFGLAKLL--------------------GSESSYITTRVMGTFGYVAPE-YASTG 258
+ KV+DFGL++ + I T + T Y APE +
Sbjct: 147 HVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGST 206
Query: 259 MLNERSDVYSFGILIMEVISGR 280
+ D++S G ++ E++ G+
Sbjct: 207 KYTKGIDMWSLGCILGEILCGK 228
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 78/166 (46%), Gaps = 14/166 (8%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E++ + +H+N++ + + Y+ ++ LH + L+ +
Sbjct: 59 EIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVIS-TQMLSDDHIQYF 117
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLL---GSESSYIT- 240
I T + + LH V+HRD+K SN+LI+ + + KV DFGLA+++ +++S T
Sbjct: 118 IYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTG 174
Query: 241 -----TRVMGTFGYVAPEYASTGMLNERS-DVYSFGILIMEVISGR 280
T + T Y APE T R+ DV+S G ++ E+ R
Sbjct: 175 QQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 90/186 (48%), Gaps = 30/186 (16%)
Query: 111 LLNNRGQAEREF-KVEVEA-IGRV-RHKNLVRLLGYCAEGAHRMLVYEYVNNGNL----- 162
++N + + R+ K+E EA I R+ +H N+VRL +E LV++ V G L
Sbjct: 63 IINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIV 122
Query: 163 --EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILID---K 217
E + D C I + ++++H+ +VHRD+K N+L+ K
Sbjct: 123 AREYYSEADASHC-----------IHQILESVNHIHQH---DIVHRDLKPENLLLASKCK 168
Query: 218 HWNPKVSDFGLA-KLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEV 276
K++DFGLA ++ G + ++ GT GY++PE + D+++ G+++ +
Sbjct: 169 GAAVKLADFGLAIEVQGEQQAWFG--FAGTPGYLSPEVLRKDPYGKPVDIWACGVILYIL 226
Query: 277 ISGRIP 282
+ G P
Sbjct: 227 LVGYPP 232
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 89/187 (47%), Gaps = 30/187 (16%)
Query: 110 NLLNNRGQAEREF-KVEVEA-IGRV-RHKNLVRLLGYCAEGAHRMLVYEYVNNGNL---- 162
++N + + R+ K+E EA I R+ +H N+VRL +E H L+++ V G L
Sbjct: 53 KIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDI 112
Query: 163 ---EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILID--- 216
E + D C I + + + H + VVHRD+K N+L+
Sbjct: 113 VAREYYSEADASHC-----------IQQILEAVLHCH---QMGVVHRDLKPENLLLASKL 158
Query: 217 KHWNPKVSDFGLA-KLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIME 275
K K++DFGLA ++ G + ++ GT GY++PE + D+++ G+++
Sbjct: 159 KGAAVKLADFGLAIEVEGEQQAWFG--FAGTPGYLSPEVLRKDPYGKPVDLWACGVILYI 216
Query: 276 VISGRIP 282
++ G P
Sbjct: 217 LLVGYPP 223
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 98/250 (39%), Gaps = 54/250 (21%)
Query: 123 KVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLH--------------- 167
K EV + ++ H N+ RL + + LV E + G+L L+
Sbjct: 76 KTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVV 135
Query: 168 -GDVGPCSPLTWE--------------------IRMNIILGTAKGLSYLHEGLEPKVVHR 206
+ PC E + NI+ L YLH + HR
Sbjct: 136 KTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHN---QGICHR 192
Query: 207 DIKSSNILI--DKHWNPKVSDFGLAK---LLGSESSYITTRVMGTFGYVAPEYASTGMLN 261
DIK N L +K + K+ DFGL+K L + Y T GT +VAPE +T N
Sbjct: 193 DIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTT--N 250
Query: 262 E----RSDVYSFGILIMEVISGRIPVDYSRPPEEVNLIEWLKKMVTNRNPE-GVLDPKLP 316
E + D +S G+L+ ++ G +P + ++ + L K + NP VL P L
Sbjct: 251 ESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQV--LNKKLCFENPNYNVLSP-LA 307
Query: 317 EKPTSRLLKR 326
S LL R
Sbjct: 308 RDLLSNLLNR 317
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 78/166 (46%), Gaps = 14/166 (8%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E++ + +H+N++ + + Y+ ++ LH + L+ +
Sbjct: 59 EIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVIS-TQMLSDDHIQYF 117
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLL---GSESSYIT- 240
I T + + LH V+HRD+K SN+LI+ + + KV DFGLA+++ +++S T
Sbjct: 118 IYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTG 174
Query: 241 -----TRVMGTFGYVAPEYASTGMLNERS-DVYSFGILIMEVISGR 280
T + T Y APE T R+ DV+S G ++ E+ R
Sbjct: 175 QQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 88/187 (47%), Gaps = 30/187 (16%)
Query: 110 NLLNNRGQAEREF-KVEVEA-IGRV-RHKNLVRLLGYCAEGAHRMLVYEYVNNGNL---- 162
++N + + R+ K+E EA I R+ +H N+VRL +E LV++ V G L
Sbjct: 35 KIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDI 94
Query: 163 ---EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILID--- 216
E + D C I + + + H + VVHRD+K N+L+
Sbjct: 95 VAREYYSEADASHC-----------IQQILEAVLHCH---QMGVVHRDLKPENLLLASKC 140
Query: 217 KHWNPKVSDFGLA-KLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIME 275
K K++DFGLA ++ G + ++ GT GY++PE + D+++ G+++
Sbjct: 141 KGAAVKLADFGLAIEVQGDQQAWFG--FAGTPGYLSPEVLRKEAYGKPVDIWACGVILYI 198
Query: 276 VISGRIP 282
++ G P
Sbjct: 199 LLVGYPP 205
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 17/204 (8%)
Query: 103 NSKVAVKNLLNNRGQA-EREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
N VAVK + RG+ + K E+ +RH N+VR H +V EY + G
Sbjct: 44 NELVAVKYI--ERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGE 101
Query: 162 LEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
L + + + G S ++ G+SY H +V HRD+K N L+D P
Sbjct: 102 LFERI-CNAGRFSEDEARFFFQQLIS---GVSYCHAM---QVCHRDLKLENTLLDGSPAP 154
Query: 222 --KVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNER-SDVYSFGILIMEVIS 278
K+ FG +K S +T +GT Y+APE + + +DV+S G+ + ++
Sbjct: 155 RLKICAFGYSKSSVLHSQPKST--VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLV 212
Query: 279 GRIPVDYSRPPEEVNLIEWLKKMV 302
G P + P E N + + +++
Sbjct: 213 GAYP--FEDPEEPKNFRKTIHRIL 234
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 18/168 (10%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E++ + +H+N++ + + Y+ ++ LH + L+ +
Sbjct: 59 EIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVIS-TQMLSDDHIQYF 117
Query: 185 ILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLL-----------G 233
I T + + LH V+HRD+K SN+LI+ + + KV DFGLA+++ G
Sbjct: 118 IYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTG 174
Query: 234 SESSYITTRVMGTFGYVAPEYASTGMLNERS-DVYSFGILIMEVISGR 280
+S + + T Y APE T R+ DV+S G ++ E+ R
Sbjct: 175 QQSGMV--EFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 74/163 (45%), Gaps = 10/163 (6%)
Query: 123 KVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRM 182
K E+ + ++ H L+ L + +L+ E+++ G L + + S +
Sbjct: 96 KNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAE---VI 152
Query: 183 NIILGTAKGLSYLHEGLEPKVVHRDIKSSNILID--KHWNPKVSDFGLAKLLGSESSYIT 240
N + +GL ++HE +VH DIK NI+ + K + K+ DFGLA L + I
Sbjct: 153 NYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE--IV 207
Query: 241 TRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPV 283
T + APE + +D+++ G+L ++SG P
Sbjct: 208 KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPF 250
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 23/207 (11%)
Query: 103 NSKVAVKNLLNNRGQA-EREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
N VAVK + RG+ + K E+ +RH N+VR H +V EY + G
Sbjct: 44 NELVAVKYI--ERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGE 101
Query: 162 LEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP 221
L + + + G S ++ G+SY H +V HRD+K N L+D P
Sbjct: 102 LFERI-CNAGRFSEDEARFFFQQLIS---GVSYCHAM---QVCHRDLKLENTLLDGSPAP 154
Query: 222 --KVSDFGLAKLLGSESSYITTR---VMGTFGYVAPEYASTGMLNER-SDVYSFGILIME 275
K+ FG +K SS + ++ +GT Y+APE + + +DV+S G+ +
Sbjct: 155 RLKICAFGYSK-----SSVLHSQPKDTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYV 209
Query: 276 VISGRIPVDYSRPPEEVNLIEWLKKMV 302
++ G P + P E N + + +++
Sbjct: 210 MLVGAYP--FEDPEEPKNFRKTIHRIL 234
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 203 VVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYAST----G 258
+HRD+K N+L+DK + K++DFG + E +GT Y++PE + G
Sbjct: 189 FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDG 248
Query: 259 MLNERSDVYSFGILIMEVISGRIPV 283
D +S G+ + E++ G P
Sbjct: 249 YYGRECDWWSVGVFLYEMLVGDTPF 273
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 103/254 (40%), Gaps = 49/254 (19%)
Query: 120 REFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHG-----DVGPCS 174
+ FK EV A + RH+N+V +G C H ++ L + DV
Sbjct: 74 KAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTR 133
Query: 175 PLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKV--SDFGLAKLL 232
+ EI KG+ YLH ++H+D+KS N+ D N KV +DFGL +
Sbjct: 134 QIAQEI--------VKGMGYLH---AKGILHKDLKSKNVFYD---NGKVVITDFGLFSIS 179
Query: 233 G---SESSYITTRVM-GTFGYVAPEYASTGM---------LNERSDVYSFGILIMEVISG 279
G + R+ G ++APE ++ SDV++ G + E+ +
Sbjct: 180 GVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAR 239
Query: 280 RIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVLDPKLPEKPTSRLLKRILLVALRCVDPNA 339
P ++P E + + +M T + P L + + + ILL C
Sbjct: 240 EWPFK-TQPAEAI-----IWQMGTG------MKPNLSQIGMGKEISDILLF---CWAFEQ 284
Query: 340 QKRPKMGHVVHMLE 353
++RP ++ MLE
Sbjct: 285 EERPTFTKLMDMLE 298
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 203 VVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYAST----G 258
+HRD+K N+L+DK + K++DFG + E +GT Y++PE + G
Sbjct: 194 FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDG 253
Query: 259 MLNERSDVYSFGILIMEVISGRIPV 283
D +S G+ + E++ G P
Sbjct: 254 YYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 203 VVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYAST----G 258
+HRD+K N+L+DK + K++DFG + E +GT Y++PE + G
Sbjct: 194 FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDG 253
Query: 259 MLNERSDVYSFGILIMEVISGRIPV 283
D +S G+ + E++ G P
Sbjct: 254 YYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 203 VVHRDIKSSNILID-KHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLN 261
VVHRDIK NILID + K+ DFG LL E T GT Y PE+ S +
Sbjct: 160 VVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEP---YTDFDGTRVYSPPEWISRHQYH 216
Query: 262 E-RSDVYSFGILIMEVISGRIPVD 284
+ V+S GIL+ +++ G IP +
Sbjct: 217 ALPATVWSLGILLYDMVCGDIPFE 240
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 89/186 (47%), Gaps = 30/186 (16%)
Query: 111 LLNNRGQAEREF-KVEVEA-IGRV-RHKNLVRLLGYCAEGAHRMLVYEYVNNGNL----- 162
++N + + R+ K+E EA I R+ +H N+VRL +E H L+++ V G L
Sbjct: 43 IINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIV 102
Query: 163 --EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILID---K 217
E + D C I + + + H + VVHR++K N+L+ K
Sbjct: 103 AREYYSEADASHC-----------IQQILEAVLHCH---QMGVVHRNLKPENLLLASKLK 148
Query: 218 HWNPKVSDFGLA-KLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEV 276
K++DFGLA ++ G + ++ GT GY++PE + D+++ G+++ +
Sbjct: 149 GAAVKLADFGLAIEVEGEQQAWFG--FAGTPGYLSPEVLRKDPYGKPVDLWACGVILYIL 206
Query: 277 ISGRIP 282
+ G P
Sbjct: 207 LVGYPP 212
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 88/187 (47%), Gaps = 30/187 (16%)
Query: 111 LLNNRGQAEREF-KVEVEA-IGRV-RHKNLVRLLGYCAEGAHRMLVYEYVNNGNL----- 162
++N + + R+ K+E EA I R+ +H N+VRL +E LV++ V G L
Sbjct: 36 IINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIV 95
Query: 163 --EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILI---DK 217
E + D C I + +++ H +VHRD+K N+L+ K
Sbjct: 96 AREYYSEADASHC-----------IQQILESVNHCHLN---GIVHRDLKPENLLLASKSK 141
Query: 218 HWNPKVSDFGLA-KLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEV 276
K++DFGLA ++ G + ++ GT GY++PE + D+++ G+++ +
Sbjct: 142 GAAVKLADFGLAIEVQGDQQAWFG--FAGTPGYLSPEVLRKDPYGKPVDMWACGVILYIL 199
Query: 277 ISGRIPV 283
+ G P
Sbjct: 200 LVGYPPF 206
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 88/187 (47%), Gaps = 30/187 (16%)
Query: 110 NLLNNRGQAEREF-KVEVEA-IGRV-RHKNLVRLLGYCAEGAHRMLVYEYVNNGNL---- 162
++N + + R+ K+E EA I R+ +H N+VRL +E LV++ V G L
Sbjct: 35 KIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDI 94
Query: 163 ---EQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILI---D 216
E + D C I + +++ H +VHRD+K N+L+
Sbjct: 95 VAREYYSEADASHC-----------IQQILESVNHCHLN---GIVHRDLKPENLLLASKS 140
Query: 217 KHWNPKVSDFGLA-KLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIME 275
K K++DFGLA ++ G + ++ GT GY++PE + D+++ G+++
Sbjct: 141 KGAAVKLADFGLAIEVQGDQQAWFG--FAGTPGYLSPEVLRKDPYGKPVDMWACGVILYI 198
Query: 276 VISGRIP 282
++ G P
Sbjct: 199 LLVGYPP 205
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 37/79 (46%)
Query: 204 VHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNER 263
HRD+K NIL+ + DFG+A E +GT Y APE S R
Sbjct: 156 THRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYR 215
Query: 264 SDVYSFGILIMEVISGRIP 282
+D+Y+ ++ E ++G P
Sbjct: 216 ADIYALTCVLYECLTGSPP 234
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 204 VHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEY-----ASTG 258
VHRDIK NIL+D + + +++DFG L + + ++ +GT Y++PE G
Sbjct: 197 VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKG 256
Query: 259 MLNERSDVYSFGILIMEVISGRIPV 283
D +S G+ + E++ G P
Sbjct: 257 RYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 98/227 (43%), Gaps = 39/227 (17%)
Query: 106 VAVKNLLNNRGQ-AEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEY-VNNGNLE 163
VAVK +L + A E K+ E+ H N++R YC+E R L + N NL+
Sbjct: 42 VAVKRMLIDFCDIALMEIKLLTESDD---HPNVIRY--YCSETTDRFLYIALELCNLNLQ 96
Query: 164 QWLHGDVGPCSPLTWEIRMN---IILGTAKGLSYLHEGLEPKVVHRDIKSSNILI----- 215
+ L + N ++ A G+++LH K++HRD+K NIL+
Sbjct: 97 DLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSR 153
Query: 216 ---DKHWNPK-----VSDFGLAKLLGSESSYITTRV---MGTFGYVAPE-------YAST 257
D+ + +SDFGL K L S S T + GT G+ APE +
Sbjct: 154 FTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTK 213
Query: 258 GMLNERSDVYSFGILIMEVIS-GRIPV--DYSRPPEEVNLIEWLKKM 301
L D++S G + ++S G+ P YSR + I L +M
Sbjct: 214 RRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDEM 260
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 203 VVHRDIKSSNILID-KHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLN 261
V+HRDIK NILID K+ DFG LL + T GT Y PE+ +
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 234
Query: 262 ERS-DVYSFGILIMEVISGRIPVDY 285
RS V+S GIL+ +++ G IP ++
Sbjct: 235 GRSAAVWSLGILLYDMVCGDIPFEH 259
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 203 VVHRDIKSSNILID-KHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLN 261
V+HRDIK NILID K+ DFG LL + T GT Y PE+ +
Sbjct: 150 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 206
Query: 262 ERS-DVYSFGILIMEVISGRIPVDY 285
RS V+S GIL+ +++ G IP ++
Sbjct: 207 GRSAAVWSLGILLYDMVCGDIPFEH 231
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 203 VVHRDIKSSNILIDKHWNP-KVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLN 261
V+HRDIK NILID + K+ DFG LL + T GT Y PE+ +
Sbjct: 150 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 206
Query: 262 ERS-DVYSFGILIMEVISGRIPVDY 285
RS V+S GIL+ +++ G IP ++
Sbjct: 207 GRSAAVWSLGILLYDMVCGDIPFEH 231
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 203 VVHRDIKSSNILID-KHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLN 261
V+HRDIK NILID K+ DFG LL + T GT Y PE+ +
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 207
Query: 262 ERS-DVYSFGILIMEVISGRIPVDY 285
RS V+S GIL+ +++ G IP ++
Sbjct: 208 GRSAAVWSLGILLYDMVCGDIPFEH 232
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 203 VVHRDIKSSNILID-KHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLN 261
V+HRDIK NILID K+ DFG LL + T GT Y PE+ +
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 207
Query: 262 ERS-DVYSFGILIMEVISGRIPVDY 285
RS V+S GIL+ +++ G IP ++
Sbjct: 208 GRSAAVWSLGILLYDMVCGDIPFEH 232
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 203 VVHRDIKSSNILID-KHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLN 261
V+HRDIK NILID K+ DFG LL + T GT Y PE+ +
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 207
Query: 262 ERS-DVYSFGILIMEVISGRIPVDY 285
RS V+S GIL+ +++ G IP ++
Sbjct: 208 GRSAAVWSLGILLYDMVCGDIPFEH 232
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 203 VVHRDIKSSNILID-KHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLN 261
V+HRDIK NILID K+ DFG LL + T GT Y PE+ +
Sbjct: 183 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 239
Query: 262 ERS-DVYSFGILIMEVISGRIPVDY 285
RS V+S GIL+ +++ G IP ++
Sbjct: 240 GRSAAVWSLGILLYDMVCGDIPFEH 264
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 203 VVHRDIKSSNILIDKHWNP-KVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLN 261
V+HRDIK NILID + K+ DFG LL + T GT Y PE+ +
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 219
Query: 262 ERS-DVYSFGILIMEVISGRIPVDY 285
RS V+S GIL+ +++ G IP ++
Sbjct: 220 GRSAAVWSLGILLYDMVCGDIPFEH 244
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 203 VVHRDIKSSNILIDKHWNP-KVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLN 261
V+HRDIK NILID + K+ DFG LL + T GT Y PE+ +
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 220
Query: 262 ERS-DVYSFGILIMEVISGRIPVDY 285
RS V+S GIL+ +++ G IP ++
Sbjct: 221 GRSAAVWSLGILLYDMVCGDIPFEH 245
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 203 VVHRDIKSSNILID-KHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLN 261
V+HRDIK NILID K+ DFG LL + T GT Y PE+ +
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 219
Query: 262 ERS-DVYSFGILIMEVISGRIPVDY 285
RS V+S GIL+ +++ G IP ++
Sbjct: 220 GRSAAVWSLGILLYDMVCGDIPFEH 244
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 203 VVHRDIKSSNILID-KHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLN 261
V+HRDIK NILID K+ DFG LL + T GT Y PE+ +
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 220
Query: 262 ERS-DVYSFGILIMEVISGRIPVDY 285
RS V+S GIL+ +++ G IP ++
Sbjct: 221 GRSAAVWSLGILLYDMVCGDIPFEH 245
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 203 VVHRDIKSSNILID-KHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLN 261
V+HRDIK NILID K+ DFG LL + T GT Y PE+ +
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 234
Query: 262 ERS-DVYSFGILIMEVISGRIPVDY 285
RS V+S GIL+ +++ G IP ++
Sbjct: 235 GRSAAVWSLGILLYDMVCGDIPFEH 259
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 203 VVHRDIKSSNILID-KHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLN 261
V+HRDIK NILID K+ DFG LL + T GT Y PE+ +
Sbjct: 170 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 226
Query: 262 ERS-DVYSFGILIMEVISGRIPVDY 285
RS V+S GIL+ +++ G IP ++
Sbjct: 227 GRSAAVWSLGILLYDMVCGDIPFEH 251
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 203 VVHRDIKSSNILIDKHWNP-KVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLN 261
V+HRDIK NILID + K+ DFG LL + T GT Y PE+ +
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 220
Query: 262 ERS-DVYSFGILIMEVISGRIPVDY 285
RS V+S GIL+ +++ G IP ++
Sbjct: 221 GRSAAVWSLGILLYDMVCGDIPFEH 245
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 203 VVHRDIKSSNILID-KHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLN 261
V+HRDIK NILID K+ DFG LL + T GT Y PE+ +
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 219
Query: 262 ERS-DVYSFGILIMEVISGRIPVDY 285
RS V+S GIL+ +++ G IP ++
Sbjct: 220 GRSAAVWSLGILLYDMVCGDIPFEH 244
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 203 VVHRDIKSSNILID-KHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLN 261
V+HRDIK NILID K+ DFG LL + T GT Y PE+ +
Sbjct: 134 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 190
Query: 262 ERS-DVYSFGILIMEVISGRIPVDYS 286
RS V+S GIL+ +++ G IP ++
Sbjct: 191 GRSAAVWSLGILLYDMVCGDIPFEHD 216
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 203 VVHRDIKSSNILID-KHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLN 261
V+HRDIK NILID K+ DFG LL + T GT Y PE+ +
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 220
Query: 262 ERS-DVYSFGILIMEVISGRIPVDY 285
RS V+S GIL+ +++ G IP ++
Sbjct: 221 GRSAAVWSLGILLYDMVCGDIPFEH 245
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 203 VVHRDIKSSNILID-KHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLN 261
V+HRDIK NILID K+ DFG LL + T GT Y PE+ +
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 219
Query: 262 ERS-DVYSFGILIMEVISGRIPVDY 285
RS V+S GIL+ +++ G IP ++
Sbjct: 220 GRSAAVWSLGILLYDMVCGDIPFEH 244
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 203 VVHRDIKSSNILID-KHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLN 261
V+HRDIK NILID K+ DFG LL + T GT Y PE+ +
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 234
Query: 262 ERS-DVYSFGILIMEVISGRIPVDY 285
RS V+S GIL+ +++ G IP ++
Sbjct: 235 GRSAAVWSLGILLYDMVCGDIPFEH 259
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 203 VVHRDIKSSNILID-KHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLN 261
V+HRDIK NILID K+ DFG LL + T GT Y PE+ +
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 192
Query: 262 ERS-DVYSFGILIMEVISGRIPVDY 285
RS V+S GIL+ +++ G IP ++
Sbjct: 193 GRSAAVWSLGILLYDMVCGDIPFEH 217
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 203 VVHRDIKSSNILID-KHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLN 261
V+HRDIK NILID K+ DFG LL + T GT Y PE+ +
Sbjct: 158 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 214
Query: 262 ERS-DVYSFGILIMEVISGRIPVDY 285
RS V+S GIL+ +++ G IP ++
Sbjct: 215 GRSAAVWSLGILLYDMVCGDIPFEH 239
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 203 VVHRDIKSSNILID-KHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLN 261
V+HRDIK NILID K+ DFG LL + T GT Y PE+ +
Sbjct: 135 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 191
Query: 262 ERS-DVYSFGILIMEVISGRIPVDY 285
RS V+S GIL+ +++ G IP ++
Sbjct: 192 GRSAAVWSLGILLYDMVCGDIPFEH 216
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 203 VVHRDIKSSNILID-KHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLN 261
V+HRDIK NILID K+ DFG LL + T GT Y PE+ +
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 192
Query: 262 ERS-DVYSFGILIMEVISGRIPVDY 285
RS V+S GIL+ +++ G IP ++
Sbjct: 193 GRSAAVWSLGILLYDMVCGDIPFEH 217
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 203 VVHRDIKSSNILID-KHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLN 261
V+HRDIK NILID K+ DFG LL + T GT Y PE+ +
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 192
Query: 262 ERS-DVYSFGILIMEVISGRIPVDY 285
RS V+S GIL+ +++ G IP ++
Sbjct: 193 GRSAAVWSLGILLYDMVCGDIPFEH 217
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 203 VVHRDIKSSNILID-KHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLN 261
V+HRDIK NILID K+ DFG LL + T GT Y PE+ +
Sbjct: 135 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 191
Query: 262 ERS-DVYSFGILIMEVISGRIPVDY 285
RS V+S GIL+ +++ G IP ++
Sbjct: 192 GRSAAVWSLGILLYDMVCGDIPFEH 216
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 112/249 (44%), Gaps = 30/249 (12%)
Query: 103 NSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRML-----VYEYV 157
+ +VA+K ++ Q+ + E++ I R+ H N+V++ ++ + E
Sbjct: 36 DKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELN 95
Query: 158 NNGNLEQWLHGDVGPC---SPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNIL 214
+ +++++ D+ PL E + +GL Y+H V+HRD+K +N+
Sbjct: 96 SVYIVQEYMETDLANVLEQGPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLF 152
Query: 215 ID-KHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGML------NERSDVY 267
I+ + K+ DFGLA+++ S+ + + G V Y S +L + D++
Sbjct: 153 INTEDLVLKIGDFGLARIMDPHYSH---KGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMW 209
Query: 268 SFGILIMEVISGRIPVDYSRPPEEVNLIEWLKKMVTNRNPEGVL---------DPKLPEK 318
+ G + E+++G+ + E++ LI +V + + +L D P K
Sbjct: 210 AAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHK 269
Query: 319 PTSRLLKRI 327
P ++LL I
Sbjct: 270 PLTQLLPGI 278
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 203 VVHRDIKSSNILID-KHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLN 261
V+HRDIK NILID K+ DFG LL + T GT Y PE+ +
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 187
Query: 262 ERS-DVYSFGILIMEVISGRIPVDYS 286
RS V+S GIL+ +++ G IP ++
Sbjct: 188 GRSAAVWSLGILLYDMVCGDIPFEHD 213
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 203 VVHRDIKSSNILID-KHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLN 261
V+HRDIK NILID K+ DFG LL + T GT Y PE+ +
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 187
Query: 262 ERS-DVYSFGILIMEVISGRIPVDYS 286
RS V+S GIL+ +++ G IP ++
Sbjct: 188 GRSAAVWSLGILLYDMVCGDIPFEHD 213
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 203 VVHRDIKSSNILID-KHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLN 261
V+HRDIK NILID K+ DFG LL + T GT Y PE+ +
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 187
Query: 262 ERS-DVYSFGILIMEVISGRIPVDYS 286
RS V+S GIL+ +++ G IP ++
Sbjct: 188 GRSAAVWSLGILLYDMVCGDIPFEHD 213
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 78/173 (45%), Gaps = 17/173 (9%)
Query: 122 FKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL-EQWLHGDVGPCSPLTWEI 180
FK E+E + + H N++RL + LV E G L E+ +H V S
Sbjct: 53 FKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAA--- 109
Query: 181 RMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILI--DKHWNP-KVSDFGLAKLLGSESS 237
I+ ++Y H+ V HRD+K N L D +P K+ DFGLA
Sbjct: 110 --RIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF-KPGK 163
Query: 238 YITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVDYSRPPE 290
+ T+V GT YV+P+ G+ D +S G+++ ++ G P +S P +
Sbjct: 164 MMRTKV-GTPYYVSPQVLE-GLYGPECDEWSAGVMMYVLLCGYPP--FSAPTD 212
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 76/163 (46%), Gaps = 17/163 (10%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL--EQWLHGDVGPCSPLTWEIRM 182
EV + ++ H N+++L + + + LV E G L E L S + + M
Sbjct: 54 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKF---SEVDAAVIM 110
Query: 183 NIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP---KVSDFGLAKLLGSESSYI 239
+L G +YLH+ +VHRD+K N+L++ K+ DFGL+ E
Sbjct: 111 KQVLS---GTTYLHK---HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF--EVGGK 162
Query: 240 TTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIP 282
+GT Y+APE +E+ DV+S G+++ ++ G P
Sbjct: 163 MKERLGTAYYIAPEVLRKKY-DEKCDVWSCGVILYILLCGYPP 204
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 78/173 (45%), Gaps = 17/173 (9%)
Query: 122 FKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL-EQWLHGDVGPCSPLTWEI 180
FK E+E + + H N++RL + LV E G L E+ +H V S
Sbjct: 70 FKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAA--- 126
Query: 181 RMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILI--DKHWNP-KVSDFGLAKLLGSESS 237
I+ ++Y H + V HRD+K N L D +P K+ DFGLA
Sbjct: 127 --RIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF-KPGK 180
Query: 238 YITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIPVDYSRPPE 290
+ T+V GT YV+P+ G+ D +S G+++ ++ G P +S P +
Sbjct: 181 MMRTKV-GTPYYVSPQVLE-GLYGPECDEWSAGVMMYVLLCGYPP--FSAPTD 229
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 90/201 (44%), Gaps = 23/201 (11%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGA--HRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRM 182
E E + ++ HKN+V+L E H++L+ E+ G+L L + L +
Sbjct: 57 EFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLE-EPSNAYGLPESEFL 115
Query: 183 NIILGTAKGLSYLHEGLEPKVVHRDIKSSNILI----DKHWNPKVSDFGLAKLLGSESSY 238
++ G+++L E +VHR+IK NI+ D K++DFG A+ L + +
Sbjct: 116 IVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQF 172
Query: 239 ITTRVMGTFGYVAPEYASTGMLNE--------RSDVYSFGILIMEVISGRIPVDYSRPPE 290
++ + GT Y+ P+ +L + D++S G+ +G +P P
Sbjct: 173 VS--LYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPR 230
Query: 291 EVNLIEWLKKMVTNRNPEGVL 311
E + K++T + P G +
Sbjct: 231 RNK--EVMYKIITGK-PSGAI 248
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 97/223 (43%), Gaps = 35/223 (15%)
Query: 106 VAVKNLLNNRGQ-AEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEY-VNNGNLE 163
VAVK +L + A E K+ E+ H N++R YC+E R L + N NL+
Sbjct: 60 VAVKRMLIDFCDIALMEIKLLTESDD---HPNVIRY--YCSETTDRFLYIALELCNLNLQ 114
Query: 164 QWLHGDVGPCSPLTWEIRMN---IILGTAKGLSYLHEGLEPKVVHRDIKSSNILI----- 215
+ L + N ++ A G+++LH K++HRD+K NIL+
Sbjct: 115 DLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSR 171
Query: 216 ---DKHWNPK-----VSDFGLAKLLGSESSYITTRV---MGTFGYVAPEY---ASTGMLN 261
D+ + +SDFGL K L S + GT G+ APE ++ L
Sbjct: 172 FTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLT 231
Query: 262 ERSDVYSFGILIMEVIS-GRIPV--DYSRPPEEVNLIEWLKKM 301
D++S G + ++S G+ P YSR + I L +M
Sbjct: 232 RSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDEM 274
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 97/223 (43%), Gaps = 35/223 (15%)
Query: 106 VAVKNLLNNRGQ-AEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEY-VNNGNLE 163
VAVK +L + A E K+ E+ H N++R YC+E R L + N NL+
Sbjct: 60 VAVKRMLIDFCDIALMEIKLLTESDD---HPNVIRY--YCSETTDRFLYIALELCNLNLQ 114
Query: 164 QWLHGDVGPCSPLTWEIRMN---IILGTAKGLSYLHEGLEPKVVHRDIKSSNILI----- 215
+ L + N ++ A G+++LH K++HRD+K NIL+
Sbjct: 115 DLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSR 171
Query: 216 ---DKHWNPK-----VSDFGLAKLLGSESSYITTRV---MGTFGYVAPEY---ASTGMLN 261
D+ + +SDFGL K L S + GT G+ APE ++ L
Sbjct: 172 FTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLT 231
Query: 262 ERSDVYSFGILIMEVIS-GRIPV--DYSRPPEEVNLIEWLKKM 301
D++S G + ++S G+ P YSR + I L +M
Sbjct: 232 RSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDEM 274
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 204 VHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYAST-----G 258
VHRDIK N+L+D + + +++DFG + + + ++ +GT Y++PE G
Sbjct: 197 VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMG 256
Query: 259 MLNERSDVYSFGILIMEVISGRIPV 283
D +S G+ + E++ G P
Sbjct: 257 KYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 204 VHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYAST-----G 258
VHRDIK N+L+D + + +++DFG + + + ++ +GT Y++PE G
Sbjct: 213 VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMG 272
Query: 259 MLNERSDVYSFGILIMEVISGRIPV 283
D +S G+ + E++ G P
Sbjct: 273 KYGPECDWWSLGVCMYEMLYGETPF 297
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 78/169 (46%), Gaps = 11/169 (6%)
Query: 115 RGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCS 174
R +E F+ + ++ HK+LV G C G +LV E+V G+L+ +L + C
Sbjct: 53 RNYSESFFEA-ASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKN-CI 110
Query: 175 PLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLL-- 232
+ W++ + L A +H E ++H ++ + NIL+ + + K + KL
Sbjct: 111 NILWKLEVAKQLAAA-----MHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDP 165
Query: 233 GSESSYITTRVMGT-FGYVAPEYASTGM-LNERSDVYSFGILIMEVISG 279
G + + ++ +V PE LN +D +SFG + E+ SG
Sbjct: 166 GISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 84/176 (47%), Gaps = 16/176 (9%)
Query: 122 FKVE-VEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEI 180
F+VE + A + +V L G EG + E + G+L Q + +G C P E
Sbjct: 96 FRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIK-QMG-CLP---ED 150
Query: 181 RMNIILGTA-KGLSYLHEGLEPKVVHRDIKSSNILIDKHWN-PKVSDFGLAKLL---GSE 235
R LG A +GL YLH +++H D+K+ N+L+ + + DFG A L G
Sbjct: 151 RALYYLGQALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLG 207
Query: 236 SSYITTRVM-GTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIP-VDYSRPP 289
S +T + GT ++APE + + D++S +++ +++G P Y R P
Sbjct: 208 KSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP 263
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 84/176 (47%), Gaps = 16/176 (9%)
Query: 122 FKVE-VEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEI 180
F+VE + A + +V L G EG + E + G+L Q + +G C P E
Sbjct: 112 FRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIK-QMG-CLP---ED 166
Query: 181 RMNIILGTA-KGLSYLHEGLEPKVVHRDIKSSNILIDKHWN-PKVSDFGLAKLL---GSE 235
R LG A +GL YLH +++H D+K+ N+L+ + + DFG A L G
Sbjct: 167 RALYYLGQALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLG 223
Query: 236 SSYITTRVM-GTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIP-VDYSRPP 289
S +T + GT ++APE + + D++S +++ +++G P Y R P
Sbjct: 224 KSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP 279
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 84/176 (47%), Gaps = 16/176 (9%)
Query: 122 FKVE-VEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEI 180
F+VE + A + +V L G EG + E + G+L Q + +G C P E
Sbjct: 110 FRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIK-QMG-CLP---ED 164
Query: 181 RMNIILGTA-KGLSYLHEGLEPKVVHRDIKSSNILIDKHWN-PKVSDFGLAKLL---GSE 235
R LG A +GL YLH +++H D+K+ N+L+ + + DFG A L G
Sbjct: 165 RALYYLGQALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLG 221
Query: 236 SSYITTRVM-GTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIP-VDYSRPP 289
S +T + GT ++APE + + D++S +++ +++G P Y R P
Sbjct: 222 KSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP 277
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 74/168 (44%), Gaps = 21/168 (12%)
Query: 124 VEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWE--IR 181
V++ + KN V L + + + + NL+ W++ CS E +
Sbjct: 110 VKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRR---CSLEDREHGVC 166
Query: 182 MNIILGTAKGLSYLH-EGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYIT 240
++I + A+ + +LH +GL +HRD+K SNI KV DFGL + + T
Sbjct: 167 LHIFIQIAEAVEFLHSKGL----MHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQT 222
Query: 241 TRV-----------MGTFGYVAPEYASTGMLNERSDVYSFGILIMEVI 277
+GT Y++PE + + D++S G+++ E++
Sbjct: 223 VLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 76/163 (46%), Gaps = 17/163 (10%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNL--EQWLHGDVGPCSPLTWEIRM 182
EV + ++ H N+++L + + + LV E G L E L S + + M
Sbjct: 71 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKF---SEVDAAVIM 127
Query: 183 NIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNP---KVSDFGLAKLLGSESSYI 239
+L G +YLH+ +VHRD+K N+L++ K+ DFGL+ E
Sbjct: 128 KQVLS---GTTYLHK---HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF--EVGGK 179
Query: 240 TTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIP 282
+GT Y+APE +E+ DV+S G+++ ++ G P
Sbjct: 180 MKERLGTAYYIAPEVLRKKY-DEKCDVWSCGVILYILLCGYPP 221
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 96/237 (40%), Gaps = 37/237 (15%)
Query: 107 AVKNLLNNRGQAEREFKVEVEAIGRVR-HKNLVRLLGYCA-------EGAHRMLVYEYVN 158
A+K LL+N + R EV + ++ H N+V+ + G L+ +
Sbjct: 57 ALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELC 116
Query: 159 NGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKH 218
G L ++L + PL+ + + I T + + ++H +P ++HRD+K N+L+
Sbjct: 117 KGQLVEFLK-KMESRGPLSCDTVLKIFYQTCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQ 174
Query: 219 WNPKVSDFGLAKLLGSESSY---ITTRVM--------GTFGYVAPEYA---STGMLNERS 264
K+ DFG A + Y R + T Y PE S + E+
Sbjct: 175 GTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQ 234
Query: 265 DVYSFGILIMEVISGRIPVD-----------YSRPPEEV--NLIEWLKKMVTNRNPE 308
D+++ G ++ + + P + YS PP + + L + + NPE
Sbjct: 235 DIWALGCILYLLCFRQHPFEDGAKLRIVNGKYSIPPHDTQYTVFHSLIRAMLQVNPE 291
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 11/121 (9%)
Query: 133 RHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGL 192
+H ++VR AE H ++ EY N G+L + + S +++L +GL
Sbjct: 65 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 124
Query: 193 SYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVM---GTFGY 249
Y+H +VH DIK SNI I + P A G E + + +VM G G+
Sbjct: 125 RYIH---SMSLVHMDIKPSNIFISRTSIPNA-----ASEEGDEDDWASNKVMFKIGDLGH 176
Query: 250 V 250
V
Sbjct: 177 V 177
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 11/121 (9%)
Query: 133 RHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGL 192
+H ++VR AE H ++ EY N G+L + + S +++L +GL
Sbjct: 67 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 126
Query: 193 SYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVM---GTFGY 249
Y+H +VH DIK SNI I + P A G E + + +VM G G+
Sbjct: 127 RYIH---SMSLVHMDIKPSNIFISRTSIPNA-----ASEEGDEDDWASNKVMFKIGDLGH 178
Query: 250 V 250
V
Sbjct: 179 V 179
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 11/121 (9%)
Query: 133 RHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGL 192
+H ++VR AE H ++ EY N G+L + + S +++L +GL
Sbjct: 67 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 126
Query: 193 SYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVM---GTFGY 249
Y+H +VH DIK SNI I + P A G E + + +VM G G+
Sbjct: 127 RYIH---SMSLVHMDIKPSNIFISRTSIPNA-----ASEEGDEDDWASNKVMFKIGDLGH 178
Query: 250 V 250
V
Sbjct: 179 V 179
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 81/170 (47%), Gaps = 13/170 (7%)
Query: 115 RGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCS 174
R +E F+ + ++ HK+LV G C G +LV E+V G+L+ +L + C
Sbjct: 53 RNYSESFFEA-ASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKN-CI 110
Query: 175 PLTWEIRMNIILGTAKGLSY-LHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLL- 232
+ W++ + AK L++ +H E ++H ++ + NIL+ + + K + KL
Sbjct: 111 NILWKLEV------AKQLAWAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSD 164
Query: 233 -GSESSYITTRVMGT-FGYVAPEYASTGM-LNERSDVYSFGILIMEVISG 279
G + + ++ +V PE LN +D +SFG + E+ SG
Sbjct: 165 PGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 11/121 (9%)
Query: 133 RHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGL 192
+H ++VR AE H ++ EY N G+L + + S +++L +GL
Sbjct: 69 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 128
Query: 193 SYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVM---GTFGY 249
Y+H +VH DIK SNI I + P A G E + + +VM G G+
Sbjct: 129 RYIH---SMSLVHMDIKPSNIFISRTSIPNA-----ASEEGDEDDWASNKVMFKIGDLGH 180
Query: 250 V 250
V
Sbjct: 181 V 181
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 61/132 (46%), Gaps = 12/132 (9%)
Query: 124 VEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGP--CSPLTWEIR 181
+E+ + RV H N++++L LV E +G L+ + D P PL I
Sbjct: 78 LEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSG-LDLFAFIDRHPRLDEPLASYIF 136
Query: 182 MNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITT 241
++ +A G L + ++HRDIK NI+I + + K+ DFG A L E +
Sbjct: 137 RQLV--SAVGYLRLKD-----IIHRDIKDENIVIAEDFTIKLIDFGSAAYL--ERGKLFY 187
Query: 242 RVMGTFGYVAPE 253
GT Y APE
Sbjct: 188 TFCGTIEYCAPE 199
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 89/201 (44%), Gaps = 23/201 (11%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGA--HRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRM 182
E E + ++ HKN+V+L E H++L+ E+ G+L L + L +
Sbjct: 57 EFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLE-EPSNAYGLPESEFL 115
Query: 183 NIILGTAKGLSYLHEGLEPKVVHRDIKSSNILI----DKHWNPKVSDFGLAKLLGSESSY 238
++ G+++L E +VHR+IK NI+ D K++DFG A+ L + +
Sbjct: 116 IVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQF 172
Query: 239 ITTRVMGTFGYVAPEYASTGMLNE--------RSDVYSFGILIMEVISGRIPVDYSRPPE 290
+ + GT Y+ P+ +L + D++S G+ +G +P P
Sbjct: 173 VX--LYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPR 230
Query: 291 EVNLIEWLKKMVTNRNPEGVL 311
E + K++T + P G +
Sbjct: 231 RNK--EVMYKIITGK-PSGAI 248
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 66/140 (47%), Gaps = 20/140 (14%)
Query: 151 MLVYEYVNNGNLEQWLHGDVGPCSPLTWEIR-----MNIILGTAKGLSYLHEGLEPKVVH 205
+L+ EY G + C P E+ + +I +G+ YLH+ +VH
Sbjct: 105 ILILEYAAGGEI-------FSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN---NIVH 154
Query: 206 RDIKSSNILIDKHW---NPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNE 262
D+K NIL+ + + K+ DFG+++ +G +MGT Y+APE + +
Sbjct: 155 LDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACEL--REIMGTPEYLAPEILNYDPITT 212
Query: 263 RSDVYSFGILIMEVISGRIP 282
+D+++ GI+ +++ P
Sbjct: 213 ATDMWNIGIIAYMLLTHTSP 232
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 92/197 (46%), Gaps = 26/197 (13%)
Query: 103 NSKVAVKNLLNNRGQAEREFKVEVEAIGRVR-HKNLVRLLGYCAEGAHRMLVYEYVNNGN 161
+ + AVK + G EVE + + + H+N++ L+ + E LV+E + G+
Sbjct: 38 SQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGS 97
Query: 162 LEQWLHGDVGPCSPLTWEIRMNIIL-GTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWN 220
+ +H E+ ++++ A L +LH + HRD+K NIL + H N
Sbjct: 98 ILSHIHK-----RRHFNELEASVVVQDVASALDFLH---NKGIAHRDLKPENILCE-HPN 148
Query: 221 P----KVSDFGLA---KLLGSESSYITTRVM---GTFGYVAPEYA-----STGMLNERSD 265
K+ DFGL KL G S T ++ G+ Y+APE + ++R D
Sbjct: 149 QVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCD 208
Query: 266 VYSFGILIMEVISGRIP 282
++S G+++ ++SG P
Sbjct: 209 LWSLGVILYILLSGYPP 225
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 78/164 (47%), Gaps = 14/164 (8%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E+ A + +V L G EG + E + G+L Q L + G C P E R
Sbjct: 135 ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQ-LVKEQG-CLP---EDRALY 189
Query: 185 ILGTA-KGLSYLHEGLEPKVVHRDIKSSNILIDKHWN-PKVSDFGLAKLL---GSESSYI 239
LG A +GL YLH +++H D+K+ N+L+ + + DFG A L G S +
Sbjct: 190 YLGQALEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLL 246
Query: 240 T-TRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIP 282
T + GT ++APE + + DV+S +++ +++G P
Sbjct: 247 TGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHP 290
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 82/169 (48%), Gaps = 29/169 (17%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRM--------LVYEYVNNGNLEQWLHGDVGPCSPL 176
E++ + ++H+N+V L+ C A LV+++ + +L L + +
Sbjct: 67 EIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLS 125
Query: 177 TWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLG--- 233
+ M ++L GL Y+H K++HRD+K++N+LI + K++DFGLA+
Sbjct: 126 EIKRVMQMLLN---GLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAK 179
Query: 234 -SESSYITTRVMGTFGYVAPEYASTGMLNERS-----DVYSFGILIMEV 276
S+ + RV+ T Y PE +L ER D++ G ++ E+
Sbjct: 180 NSQPNRYXNRVV-TLWYRPPEL----LLGERDYGPPIDLWGAGCIMAEM 223
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 85/191 (44%), Gaps = 22/191 (11%)
Query: 107 AVKNLLNNRGQAEREFKVEVEAIGRVR-HKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQW 165
AVK + G + EVE + + + +KN++ L+ + + LV+E + G++
Sbjct: 42 AVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAH 101
Query: 166 LHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILID--KHWNP-K 222
+ ++ A L +LH + HRD+K NIL + + +P K
Sbjct: 102 IQKQ----KHFNEREASRVVRDVAAALDFLHT---KGIAHRDLKPENILCESPEKVSPVK 154
Query: 223 VSDFGLAK--LLGSESSYITTRVM----GTFGYVAPEYA-----STGMLNERSDVYSFGI 271
+ DF L L + + ITT + G+ Y+APE ++R D++S G+
Sbjct: 155 ICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGV 214
Query: 272 LIMEVISGRIP 282
++ ++SG P
Sbjct: 215 VLYIMLSGYPP 225
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 89/192 (46%), Gaps = 19/192 (9%)
Query: 105 KVAVKNLLNNRGQAE--REFKVEVEAIGRVRHKNLVRLLGYCAEGAHR------MLVYEY 156
KVAVK L + + EF E + H ++ +L+G + M++ +
Sbjct: 53 KVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPF 112
Query: 157 VNNGNLEQWLHGDVGPCSP--LTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNIL 214
+ +G+L +L +P L + + ++ A G+ YL +HRD+ + N +
Sbjct: 113 MKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSS---RNFIHRDLAARNCM 169
Query: 215 IDKHWNPKVSDFGLAKLLGSESSY---ITTRVMGTFGYVAPEYASTGMLNERSDVYSFGI 271
+ + V+DFGL++ + S Y +++ ++A E + + SDV++FG+
Sbjct: 170 LAEDMTVCVADFGLSRKIYSGDYYRQGCASKL--PVKWLALESLADNLYTVHSDVWAFGV 227
Query: 272 LIMEVIS-GRIP 282
+ E+++ G+ P
Sbjct: 228 TMWEIMTRGQTP 239
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 95/227 (41%), Gaps = 39/227 (17%)
Query: 106 VAVKNLLNNRGQ-AEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEY-VNNGNLE 163
VAVK +L + A E K+ E+ H N++R YC+E R L + N NL+
Sbjct: 42 VAVKRMLIDFCDIALMEIKLLTESDD---HPNVIRY--YCSETTDRFLYIALELCNLNLQ 96
Query: 164 QWLHGDVGPCSPLTWEIRMN---IILGTAKGLSYLHEGLEPKVVHRDIKSSNILID---- 216
+ L + N ++ A G+++LH K++HRD+K NIL+
Sbjct: 97 DLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSR 153
Query: 217 ---------KHWNPKVSDFGLAKLLGSESSYITTRV---MGTFGYVAPE-------YAST 257
++ +SDFGL K L S + GT G+ APE +
Sbjct: 154 FTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTK 213
Query: 258 GMLNERSDVYSFGILIMEVIS-GRIPV--DYSRPPEEVNLIEWLKKM 301
L D++S G + ++S G+ P YSR + I L +M
Sbjct: 214 RRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDEM 260
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 8/102 (7%)
Query: 184 IILGTAKGLSYLHEGLEPKVVHRDIKSSNIL-IDKHWNP--KVSDFGLAKLLGSESSYIT 240
I+ + + YLH + HRD+K N+L K N K++DFG AK S +S +T
Sbjct: 126 IMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LT 181
Query: 241 TRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIP 282
T + YVAPE ++ D++S G+++ ++ G P
Sbjct: 182 TPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 222
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 86/187 (45%), Gaps = 20/187 (10%)
Query: 102 DNSKVAVKNLLNNRGQAEREFKVEVEAIGRVRH-KNLVRLLGYCAEGAHRM--LVYEYVN 158
+N KV VK L + + + K E++ + +R N++ L + R LV+E+VN
Sbjct: 61 NNEKVVVKIL---KPVKKNKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVN 117
Query: 159 NGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILID-K 217
N + +Q + ++IR + K L Y H ++HRD+K N++ID +
Sbjct: 118 NTDFKQLYQ------TLTDYDIRF-YMYEILKALDYCHSM---GIMHRDVKPHNVMIDHE 167
Query: 218 HWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPE-YASTGMLNERSDVYSFGILIMEV 276
H ++ D+GLA+ Y RV + + PE M + D++S G ++ +
Sbjct: 168 HRKLRLIDWGLAEFYHPGQEY-NVRVASRY-FKGPELLVDYQMYDYSLDMWSLGCMLASM 225
Query: 277 ISGRIPV 283
I + P
Sbjct: 226 IFRKEPF 232
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 82/169 (48%), Gaps = 29/169 (17%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRM--------LVYEYVNNGNLEQWLHGDVGPCSPL 176
E++ + ++H+N+V L+ C A LV+++ + +L L + +
Sbjct: 67 EIKILQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEH-DLAGLLSNVLVKFTLS 125
Query: 177 TWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLG--- 233
+ M ++L GL Y+H K++HRD+K++N+LI + K++DFGLA+
Sbjct: 126 EIKRVMQMLLN---GLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAK 179
Query: 234 -SESSYITTRVMGTFGYVAPEYASTGMLNERS-----DVYSFGILIMEV 276
S+ + RV+ T Y PE +L ER D++ G ++ E+
Sbjct: 180 NSQPNRYXNRVV-TLWYRPPEL----LLGERDYGPPIDLWGAGCIMAEM 223
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 82/169 (48%), Gaps = 29/169 (17%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRM--------LVYEYVNNGNLEQWLHGDVGPCSPL 176
E++ + ++H+N+V L+ C A LV+++ + +L L + +
Sbjct: 66 EIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLS 124
Query: 177 TWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLG--- 233
+ M ++L GL Y+H K++HRD+K++N+LI + K++DFGLA+
Sbjct: 125 EIKRVMQMLLN---GLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAK 178
Query: 234 -SESSYITTRVMGTFGYVAPEYASTGMLNERS-----DVYSFGILIMEV 276
S+ + RV+ T Y PE +L ER D++ G ++ E+
Sbjct: 179 NSQPNRYXNRVV-TLWYRPPEL----LLGERDYGPPIDLWGAGCIMAEM 222
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 8/102 (7%)
Query: 184 IILGTAKGLSYLHEGLEPKVVHRDIKSSNIL-IDKHWNP--KVSDFGLAKLLGSESSYIT 240
I+ + + YLH + HRD+K N+L K N K++DFG AK S +S +T
Sbjct: 127 IMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LT 182
Query: 241 TRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIP 282
T + YVAPE ++ D++S G+++ ++ G P
Sbjct: 183 TPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 223
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 8/102 (7%)
Query: 184 IILGTAKGLSYLHEGLEPKVVHRDIKSSNIL-IDKHWNP--KVSDFGLAKLLGSESSYIT 240
I+ + + YLH + HRD+K N+L K N K++DFG AK S +S +T
Sbjct: 128 IMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LT 183
Query: 241 TRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIP 282
T + YVAPE ++ D++S G+++ ++ G P
Sbjct: 184 TPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 224
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 8/102 (7%)
Query: 184 IILGTAKGLSYLHEGLEPKVVHRDIKSSNIL-IDKHWNP--KVSDFGLAKLLGSESSYIT 240
I+ + + YLH + HRD+K N+L K N K++DFG AK S +S +T
Sbjct: 122 IMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LT 177
Query: 241 TRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIP 282
T + YVAPE ++ D++S G+++ ++ G P
Sbjct: 178 TPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 218
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 82/169 (48%), Gaps = 29/169 (17%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRM--------LVYEYVNNGNLEQWLHGDVGPCSPL 176
E++ + ++H+N+V L+ C A LV+++ + +L L + +
Sbjct: 67 EIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLS 125
Query: 177 TWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLG--- 233
+ M ++L GL Y+H K++HRD+K++N+LI + K++DFGLA+
Sbjct: 126 EIKRVMQMLLN---GLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAK 179
Query: 234 -SESSYITTRVMGTFGYVAPEYASTGMLNERS-----DVYSFGILIMEV 276
S+ + RV+ T Y PE +L ER D++ G ++ E+
Sbjct: 180 NSQPNRYXNRVV-TLWYRPPEL----LLGERDYGPPIDLWGAGCIMAEM 223
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 8/102 (7%)
Query: 184 IILGTAKGLSYLHEGLEPKVVHRDIKSSNIL-IDKHWNP--KVSDFGLAKLLGSESSYIT 240
I+ + + YLH + HRD+K N+L K N K++DFG AK S +S +T
Sbjct: 166 IMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LT 221
Query: 241 TRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIP 282
T + YVAPE ++ D++S G+++ ++ G P
Sbjct: 222 TPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 262
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 8/102 (7%)
Query: 184 IILGTAKGLSYLHEGLEPKVVHRDIKSSNIL-IDKHWNP--KVSDFGLAKLLGSESSYIT 240
I+ + + YLH + HRD+K N+L K N K++DFG AK S +S +T
Sbjct: 122 IMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LT 177
Query: 241 TRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIP 282
T + YVAPE ++ D++S G+++ ++ G P
Sbjct: 178 TPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 218
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 8/102 (7%)
Query: 184 IILGTAKGLSYLHEGLEPKVVHRDIKSSNIL-IDKHWNP--KVSDFGLAKLLGSESSYIT 240
I+ + + YLH + HRD+K N+L K N K++DFG AK S +S +T
Sbjct: 120 IMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LT 175
Query: 241 TRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIP 282
T + YVAPE ++ D++S G+++ ++ G P
Sbjct: 176 TPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 216
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 8/102 (7%)
Query: 184 IILGTAKGLSYLHEGLEPKVVHRDIKSSNIL-IDKHWNP--KVSDFGLAKLLGSESSYIT 240
I+ + + YLH + HRD+K N+L K N K++DFG AK S +S +T
Sbjct: 121 IMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LT 176
Query: 241 TRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIP 282
T + YVAPE ++ D++S G+++ ++ G P
Sbjct: 177 TPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 217
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 8/102 (7%)
Query: 184 IILGTAKGLSYLHEGLEPKVVHRDIKSSNIL-IDKHWNP--KVSDFGLAKLLGSESSYIT 240
I+ + + YLH + HRD+K N+L K N K++DFG AK S +S +T
Sbjct: 172 IMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LT 227
Query: 241 TRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIP 282
T + YVAPE ++ D++S G+++ ++ G P
Sbjct: 228 TPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 268
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 8/102 (7%)
Query: 184 IILGTAKGLSYLHEGLEPKVVHRDIKSSNIL-IDKHWNP--KVSDFGLAKLLGSESSYIT 240
I+ + + YLH + HRD+K N+L K N K++DFG AK S +S +T
Sbjct: 136 IMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LT 191
Query: 241 TRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIP 282
T + YVAPE ++ D++S G+++ ++ G P
Sbjct: 192 TPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 232
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 14/134 (10%)
Query: 152 LVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSS 211
LV+E+VNN + +Q + ++IR + K L Y H ++HRD+K
Sbjct: 111 LVFEHVNNTDFKQLYQ------TLTDYDIRF-YMYEILKALDYCHSM---GIMHRDVKPH 160
Query: 212 NILID-KHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPE-YASTGMLNERSDVYSF 269
N+LID +H ++ D+GLA+ Y RV + + PE M + D++S
Sbjct: 161 NVLIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVASRY-FKGPELLVDYQMYDYSLDMWSL 218
Query: 270 GILIMEVISGRIPV 283
G ++ +I + P
Sbjct: 219 GCMLASMIFRKEPF 232
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 188 TAKGLSYLH-EGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGT 246
T L++LH +GL VH D+K +NI + K+ DFGL LG+ + G
Sbjct: 166 TLLALAHLHSQGL----VHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQE--GD 219
Query: 247 FGYVAPEYASTGMLNERSDVYSFGILIMEV 276
Y+APE G +DV+S G+ I+EV
Sbjct: 220 PRYMAPELLQ-GSYGTAADVFSLGLTILEV 248
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 8/102 (7%)
Query: 184 IILGTAKGLSYLHEGLEPKVVHRDIKSSNIL-IDKHWNP--KVSDFGLAKLLGSESSYIT 240
I+ + + YLH + HRD+K N+L K N K++DFG AK S +S
Sbjct: 120 IMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL-- 174
Query: 241 TRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIP 282
T T YVAPE ++ D++S G+++ ++ G P
Sbjct: 175 TEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 216
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 80/172 (46%), Gaps = 15/172 (8%)
Query: 125 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNI 184
E+ A + +V L G EG + E + G+L Q L + G C P E R
Sbjct: 116 ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQ-LVKEQG-CLP---EDRALY 170
Query: 185 ILGTA-KGLSYLHEGLEPKVVHRDIKSSNILIDKHWN-PKVSDFGLAKLL---GSESSYI 239
LG A +GL YLH +++H D+K+ N+L+ + + DFG A L G +
Sbjct: 171 YLGQALEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLL 227
Query: 240 T-TRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRIP-VDYSRPP 289
T + GT ++APE + + DV+S +++ +++G P + R P
Sbjct: 228 TGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGP 279
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 70/153 (45%), Gaps = 18/153 (11%)
Query: 136 NLVRLLGYCAEGAHRM--LVYEYVNNGNLEQWLHGDVGPCSPLT-WEIRMNIILGTAKGL 192
N+++L+ + + LV+EY+NN + +Q LT ++IR + K L
Sbjct: 94 NIIKLIDTVKDPVSKTPALVFEYINNTDFKQLY-------QILTDFDIRF-YMYELLKAL 145
Query: 193 SYLHEGLEPKVVHRDIKSSNILIDKHWNP-KVSDFGLAKLLGSESSYITTRVMGTFGYVA 251
Y H ++HRD+K N++ID ++ D+GLA+ Y RV + +
Sbjct: 146 DYCHS---KGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEY-NVRVASRY-FKG 200
Query: 252 PE-YASTGMLNERSDVYSFGILIMEVISGRIPV 283
PE M + D++S G ++ +I R P
Sbjct: 201 PELLVDYQMYDYSLDMWSLGCMLASMIFRREPF 233
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 63/134 (47%), Gaps = 14/134 (10%)
Query: 152 LVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSS 211
LV+E+VNN + +Q + ++IR + K L Y H ++HRD+K
Sbjct: 111 LVFEHVNNTDFKQLYQ------TLTDYDIRF-YMYEILKALDYCHSM---GIMHRDVKPH 160
Query: 212 NILID-KHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPE-YASTGMLNERSDVYSF 269
N++ID +H ++ D+GLA+ Y RV + + PE M + D++S
Sbjct: 161 NVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVASRY-FKGPELLVDYQMYDYSLDMWSL 218
Query: 270 GILIMEVISGRIPV 283
G ++ +I + P
Sbjct: 219 GCMLASMIFRKEPF 232
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 83/187 (44%), Gaps = 26/187 (13%)
Query: 106 VAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRM------LVYEYVNN 159
VA+K +L + RE ++ + ++ H N+VRL + + LV +YV
Sbjct: 48 VAIKKVLQGKAFKNRELQI----MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 103
Query: 160 GNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHW 219
H + +++ + + L+Y+H + HRDIK N+L+D
Sbjct: 104 TVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDT 159
Query: 220 NP-KVSDFGLAKLL---GSESSYITTRVMGTFGYVAPE--YASTGMLNERSDVYSFGILI 273
K+ DFG AK L SYI +R Y APE + +T + DV+S G ++
Sbjct: 160 AVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPELIFGATDYTSS-IDVWSAGCVL 213
Query: 274 MEVISGR 280
E++ G+
Sbjct: 214 AELLLGQ 220
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 83/187 (44%), Gaps = 26/187 (13%)
Query: 106 VAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRM------LVYEYVNN 159
VA+K +L + RE ++ + ++ H N+VRL + + LV +YV
Sbjct: 48 VAIKKVLQGKAFKNRELQI----MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 103
Query: 160 GNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHW 219
H + +++ + + L+Y+H + HRDIK N+L+D
Sbjct: 104 TVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDT 159
Query: 220 NP-KVSDFGLAKLL---GSESSYITTRVMGTFGYVAPE--YASTGMLNERSDVYSFGILI 273
K+ DFG AK L SYI +R Y APE + +T + DV+S G ++
Sbjct: 160 AVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPELIFGATDYTSS-IDVWSAGCVL 213
Query: 274 MEVISGR 280
E++ G+
Sbjct: 214 AELLLGQ 220
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 70/153 (45%), Gaps = 18/153 (11%)
Query: 136 NLVRLLGYCAEGAHRM--LVYEYVNNGNLEQWLHGDVGPCSPLT-WEIRMNIILGTAKGL 192
N+++L+ + + LV+EY+NN + +Q LT ++IR + K L
Sbjct: 99 NIIKLIDTVKDPVSKTPALVFEYINNTDFKQLY-------QILTDFDIRF-YMYELLKAL 150
Query: 193 SYLHEGLEPKVVHRDIKSSNILIDKHWNP-KVSDFGLAKLLGSESSYITTRVMGTFGYVA 251
Y H ++HRD+K N++ID ++ D+GLA+ Y RV + +
Sbjct: 151 DYCHS---KGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEY-NVRVASRY-FKG 205
Query: 252 PE-YASTGMLNERSDVYSFGILIMEVISGRIPV 283
PE M + D++S G ++ +I R P
Sbjct: 206 PELLVDYQMYDYSLDMWSLGCMLASMIFRREPF 238
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 26/187 (13%)
Query: 106 VAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRM------LVYEYVNN 159
VA+K +L ++ RE ++ + ++ H N+VRL + + LV +YV
Sbjct: 61 VAIKKVLQDKRFKNRELQI----MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 116
Query: 160 GNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHW 219
H + +++ + + L+Y+H + HRDIK N+L+D
Sbjct: 117 TVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDT 172
Query: 220 NP-KVSDFGLAKLL---GSESSYITTRVMGTFGYVAPE--YASTGMLNERSDVYSFGILI 273
K+ DFG AK L SYI +R Y APE + +T + DV+S G ++
Sbjct: 173 AVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPELIFGATDYTSS-IDVWSAGCVL 226
Query: 274 MEVISGR 280
E++ G+
Sbjct: 227 AELLLGQ 233
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 26/187 (13%)
Query: 106 VAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRM------LVYEYVNN 159
VA+K +L ++ RE ++ + ++ H N+VRL + + LV +YV
Sbjct: 76 VAIKKVLQDKRFKNRELQI----MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 131
Query: 160 GNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHW 219
H + +++ + + L+Y+H + HRDIK N+L+D
Sbjct: 132 TVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDT 187
Query: 220 NP-KVSDFGLAKLL---GSESSYITTRVMGTFGYVAPE--YASTGMLNERSDVYSFGILI 273
K+ DFG AK L SYI +R Y APE + +T + DV+S G ++
Sbjct: 188 AVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPELIFGATDYTSS-IDVWSAGCVL 241
Query: 274 MEVISGR 280
E++ G+
Sbjct: 242 AELLLGQ 248
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 26/187 (13%)
Query: 106 VAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRM------LVYEYVNN 159
VA+K +L ++ RE ++ + ++ H N+VRL + + LV +YV
Sbjct: 82 VAIKKVLQDKRFKNRELQI----MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 137
Query: 160 GNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHW 219
H + +++ + + L+Y+H + HRDIK N+L+D
Sbjct: 138 TVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDT 193
Query: 220 NP-KVSDFGLAKLL---GSESSYITTRVMGTFGYVAPE--YASTGMLNERSDVYSFGILI 273
K+ DFG AK L SYI +R Y APE + +T + DV+S G ++
Sbjct: 194 AVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPELIFGATDYTSS-IDVWSAGCVL 247
Query: 274 MEVISGR 280
E++ G+
Sbjct: 248 AELLLGQ 254
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 26/187 (13%)
Query: 106 VAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRM------LVYEYVNN 159
VA+K +L ++ RE ++ + ++ H N+VRL + + LV +YV
Sbjct: 84 VAIKKVLQDKRFKNRELQI----MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 139
Query: 160 GNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHW 219
H + +++ + + L+Y+H + HRDIK N+L+D
Sbjct: 140 TVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDT 195
Query: 220 NP-KVSDFGLAKLL---GSESSYITTRVMGTFGYVAPE--YASTGMLNERSDVYSFGILI 273
K+ DFG AK L SYI +R Y APE + +T + DV+S G ++
Sbjct: 196 AVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPELIFGATDYTSS-IDVWSAGCVL 249
Query: 274 MEVISGR 280
E++ G+
Sbjct: 250 AELLLGQ 256
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.315 0.134 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,218,868
Number of Sequences: 62578
Number of extensions: 496922
Number of successful extensions: 3323
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 876
Number of HSP's successfully gapped in prelim test: 213
Number of HSP's that attempted gapping in prelim test: 1155
Number of HSP's gapped (non-prelim): 1110
length of query: 413
length of database: 14,973,337
effective HSP length: 101
effective length of query: 312
effective length of database: 8,652,959
effective search space: 2699723208
effective search space used: 2699723208
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 53 (25.0 bits)