Query 015077
Match_columns 413
No_of_seqs 196 out of 345
Neff 6.0
Searched_HMMs 13730
Date Mon Mar 25 06:16:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015077.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/015077hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1alya_ b.22.1.1 (A:) Extracel 26.2 49 0.0036 26.0 5.6 37 167-203 45-85 (146)
2 d2cupa2 g.39.1.3 (A:35-65) Fou 22.1 16 0.0011 21.8 1.1 20 31-50 5-24 (31)
3 d1kxga_ b.22.1.1 (A:) Soluble 13.9 1.2E+02 0.0087 23.6 5.3 35 165-201 41-75 (144)
4 d1blja_ d.93.1.1 (A:) P55 Blk 11.6 2E+02 0.015 20.8 5.8 18 128-145 31-48 (114)
5 d1i3za_ d.93.1.1 (A:) Ews/fli1 11.6 86 0.0062 22.8 3.4 42 130-179 23-66 (103)
6 d1dg6a_ b.22.1.1 (A:) Apoptosi 11.2 1.8E+02 0.013 22.7 5.8 18 166-183 53-70 (162)
7 d2tnfa_ b.22.1.1 (A:) Tumor ne 10.7 1.1E+02 0.008 23.8 4.1 18 166-183 38-55 (148)
8 d1m56c_ f.25.1.1 (C:) Bacteria 10.6 4.3E+02 0.032 22.1 11.8 59 212-270 131-189 (265)
9 d1xu1a_ b.22.1.1 (A:) A prolif 10.5 1.3E+02 0.0098 22.9 4.5 20 165-184 39-58 (137)
10 d1a81a1 d.93.1.1 (A:9-137) Syk 10.5 1.1E+02 0.0082 23.3 4.0 43 128-178 24-68 (129)
No 1
>d1alya_ b.22.1.1 (A:) Extracellular domain of CD40 ligand {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.15 E-value=49 Score=26.01 Aligned_cols=37 Identities=11% Similarity=0.225 Sum_probs=25.5
Q ss_pred eeecCCCceEEEEEEeeC----CCCCceEEEEEEEEECCCC
Q 015077 167 DVPITKTGMYNLFFIACD----PKLKGLVMSGKTIWKNPNG 203 (413)
Q Consensus 167 ~y~I~ktG~Y~v~~~~C~----~~~~~~~~~g~v~f~N~~G 203 (413)
...|+++|+|.||...+. +......+...+..+++.+
T Consensus 45 ~L~V~~~G~Y~VYsQv~f~~~~~~~~~~~~~~~v~~~~~~~ 85 (146)
T d1alya_ 45 QLTVKRQGLYYIYAQVTFCSNREASSQAPFIASLCLKSPGR 85 (146)
T ss_dssp EEEESSCEEEEEEEEEEEEECTTTSCSSEEEEEEEECCTTS
T ss_pred EEEeCCCeEEEEEEEEEEeccCCCCCceeEEEEEEEEcCCC
Confidence 478999999999975542 2223456777777777654
No 2
>d2cupa2 g.39.1.3 (A:35-65) Four and a half LIM domains protein 1, FHL-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.13 E-value=16 Score=21.82 Aligned_cols=20 Identities=25% Similarity=0.356 Sum_probs=17.5
Q ss_pred eeeeccCCCccccCCeeeec
Q 015077 31 SIHTYDNNPFRDVGNSALLP 50 (413)
Q Consensus 31 ~~h~y~~~~~~~~~n~~~~~ 50 (413)
-.|+.++|+|.+++|-+.|.
T Consensus 5 C~hpLA~E~F~aKd~kI~C~ 24 (31)
T d2cupa2 5 CLHPLANETFVAKDNKILCN 24 (31)
T ss_dssp SCCCTTSSCCEEETTEEECH
T ss_pred hccccccCcccccCCeEeec
Confidence 46999999999999988775
No 3
>d1kxga_ b.22.1.1 (A:) Soluble part of TALL-1, sTALL-1 (BAFF) {Human (Homo sapiens) [TaxId: 9606]}
Probab=13.89 E-value=1.2e+02 Score=23.60 Aligned_cols=35 Identities=14% Similarity=0.217 Sum_probs=22.4
Q ss_pred CeeeecCCCceEEEEEEeeCCCCCceEEEEEEEEECC
Q 015077 165 NVDVPITKTGMYNLFFIACDPKLKGLVMSGKTIWKNP 201 (413)
Q Consensus 165 ~~~y~I~ktG~Y~v~~~~C~~~~~~~~~~g~v~f~N~ 201 (413)
+-...|+++|+|.||...+..+ +.. -.++..+++.
T Consensus 41 ~g~L~V~~~GlYfVYsQV~F~~-~~~-~lsh~v~~~~ 75 (144)
T d1kxga_ 41 ENKILVKETGYFFIYGQVLYTD-KTY-AMGHLIQRKK 75 (144)
T ss_dssp TTEEEECSCEEEEEEEEEEECC-CSS-EEEEEEEEEC
T ss_pred CCEEEEccceEEEEEEEEEEeC-CCc-ccceEEEEEe
Confidence 3468899999999998776533 122 2345555544
No 4
>d1blja_ d.93.1.1 (A:) P55 Blk protein tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=11.62 E-value=2e+02 Score=20.84 Aligned_cols=18 Identities=17% Similarity=0.123 Sum_probs=14.1
Q ss_pred CCCCCCCEEecCCCCCCC
Q 015077 128 EGCKQGEVIRMPSATDIN 145 (413)
Q Consensus 128 g~C~~g~fIi~~~~~~~~ 145 (413)
..++.|.|++|++.+++.
T Consensus 31 ~~~~~G~FLVR~S~~~~g 48 (114)
T d1blja_ 31 PMNKAGSFLIRESESNKG 48 (114)
T ss_dssp TTCCTTCEEBCBCTTCSS
T ss_pred cCCCCceEEEeccCCCCC
Confidence 456789999999876654
No 5
>d1i3za_ d.93.1.1 (A:) Ews/fli1 activated transcript 2, Eat2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=11.59 E-value=86 Score=22.77 Aligned_cols=42 Identities=21% Similarity=0.191 Sum_probs=24.7
Q ss_pred CCCCCEEecCCCCCCCCceEEeEeeccCcccccCCCeeeec--CCCceEEEE
Q 015077 130 CKQGEVIRMPSATDINWPIVLNVQFSGNYLSTKMDNVDVPI--TKTGMYNLF 179 (413)
Q Consensus 130 C~~g~fIi~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~y~I--~ktG~Y~v~ 179 (413)
..+|.|+++++.+++.. -.+.+...+ ...+|.| .++|.|++.
T Consensus 23 ~~~G~FLVR~S~~~~g~-~~LSv~~~~-------~v~H~~I~~~~~g~~~~~ 66 (103)
T d1i3za_ 23 GVDGNFLIRDSESVPGA-LCLCVSFKK-------LVYSYRIFREKHGYYRIE 66 (103)
T ss_dssp CSTTEEEEEECSSSTTC-EEEEEECSS-------SEEEEEEEECTTSCEEEC
T ss_pred CCCCeEEEEecCCCCCC-EEEEEEeCC-------eEEEEEeEEcCCCcEEEe
Confidence 45799999988776652 222332221 2345666 567888753
No 6
>d1dg6a_ b.22.1.1 (A:) Apoptosis-2 ligand, apo2l/TRAIL {Human (Homo sapiens) [TaxId: 9606]}
Probab=11.21 E-value=1.8e+02 Score=22.67 Aligned_cols=18 Identities=17% Similarity=0.414 Sum_probs=14.2
Q ss_pred eeeecCCCceEEEEEEee
Q 015077 166 VDVPITKTGMYNLFFIAC 183 (413)
Q Consensus 166 ~~y~I~ktG~Y~v~~~~C 183 (413)
-...|+++|+|.||...+
T Consensus 53 G~L~V~~~G~YfVYsQV~ 70 (162)
T d1dg6a_ 53 GELVIHEKGFYYIYSQTY 70 (162)
T ss_dssp TEEEESSCEEEEEEEEEE
T ss_pred CEEEeCCCeEEEEEEEEE
Confidence 357899999999986543
No 7
>d2tnfa_ b.22.1.1 (A:) Tumor necrosis factor (TNF) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=10.73 E-value=1.1e+02 Score=23.80 Aligned_cols=18 Identities=11% Similarity=0.307 Sum_probs=15.0
Q ss_pred eeeecCCCceEEEEEEee
Q 015077 166 VDVPITKTGMYNLFFIAC 183 (413)
Q Consensus 166 ~~y~I~ktG~Y~v~~~~C 183 (413)
-...|+++|+|.||...|
T Consensus 38 g~L~V~~~G~YyVYsQv~ 55 (148)
T d2tnfa_ 38 NQLVVPADGLYLVYSQVL 55 (148)
T ss_dssp TEEECSSSEEEEEEEEEE
T ss_pred CEEEECCCeEEEEEEEEE
Confidence 467899999999997665
No 8
>d1m56c_ f.25.1.1 (C:) Bacterial aa3 type cytochrome c oxidase subunit III {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=10.58 E-value=4.3e+02 Score=22.05 Aligned_cols=59 Identities=12% Similarity=0.107 Sum_probs=34.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 015077 212 LMNFYVYMSLAYVVLSVIWFIQYVRYWKDILQLQHCITAVITLGLFEMILWFSEYANFN 270 (413)
Q Consensus 212 ~l~fYg~msi~Y~vl~~~W~~~~~k~r~~il~Iq~~I~avl~l~~~E~~~~~~~y~~~N 270 (413)
.+|+--...+.-....+.|.....+++++-.....++...++++.+=...++.+|.+..
T Consensus 131 ~l~l~nT~iLl~Ss~~~~~a~~~~~~~~~~~~~~~~L~~t~~lg~~F~~~q~~Ey~~~~ 189 (265)
T d1m56c_ 131 HLPLINTLILLCSGCAATWAHHALVHENNRRDVAWGLALAIALGALFTVFQAYEYSHAA 189 (265)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCS
T ss_pred hhHHHHHHHHHccHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 35555555555566666777766554444444444555556666655566777776543
No 9
>d1xu1a_ b.22.1.1 (A:) A proliferation-inducing ligand, APRIL {Mouse (Mus musculus) [TaxId: 10090]}
Probab=10.53 E-value=1.3e+02 Score=22.93 Aligned_cols=20 Identities=25% Similarity=0.189 Sum_probs=15.6
Q ss_pred CeeeecCCCceEEEEEEeeC
Q 015077 165 NVDVPITKTGMYNLFFIACD 184 (413)
Q Consensus 165 ~~~y~I~ktG~Y~v~~~~C~ 184 (413)
.-+..|+++|+|.||...|.
T Consensus 39 ~g~L~V~~~G~YyVYsQV~f 58 (137)
T d1xu1a_ 39 GDIVRVWDTGIYLLYSQVLF 58 (137)
T ss_dssp TTEEEECSCEEEEEEEEEEE
T ss_pred CCEEEEccceEEEEEEEEEE
Confidence 34678999999999976664
No 10
>d1a81a1 d.93.1.1 (A:9-137) Syk tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=10.49 E-value=1.1e+02 Score=23.34 Aligned_cols=43 Identities=19% Similarity=0.238 Sum_probs=24.4
Q ss_pred CCCCCCCEEecCCCCCCCCceEEeEeeccCcccccCCCeeeec--CCCceEEE
Q 015077 128 EGCKQGEVIRMPSATDINWPIVLNVQFSGNYLSTKMDNVDVPI--TKTGMYNL 178 (413)
Q Consensus 128 g~C~~g~fIi~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~y~I--~ktG~Y~v 178 (413)
..|.+|.|++|++.+.+.. ..+.+.+.+ ...+|.| +.+|.|++
T Consensus 24 ~g~~dG~FLVR~S~~~~g~-y~LSv~~~~-------~v~H~~I~~~~~g~~~i 68 (129)
T d1a81a1 24 GGMSDGLYLLRQSRNYLGG-FALSVAHGR-------KAHHYTIERELNGTYAI 68 (129)
T ss_dssp TTCCTTEEEEEECSSSTTC-EEEEEEETT-------EEEEEEEEECTTSCEEE
T ss_pred cCCCCccEEEEccCCCCcc-eEEEeeecc-------cceEEEEEEcCCCCeee
Confidence 4578899999987665542 223333321 1234555 44677775
Done!