Your job contains 1 sequence.
>015079
MLNFGRARTQQRQTRPTSFGGLDYADPKRKSNFAGKFILAAALTALCIFLLKQSPTFSSP
SPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE
PGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVL
ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM
AVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADG
TCVRDYIDVNDLVDAHVKALERAQPKKVGIYNVGTGKGRSVKEFVEACKKATSANIKVIY
EPRRPGDYAEVYSDPTKIRLELNWTAKYTNLQESLEIAWRWQKSHRGGYASII
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 015079
(413 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2204639 - symbol:MUR4 "MURUS 4" species:3702 "... 1759 3.0e-181 1
TAIR|locus:2163401 - symbol:DUR "DEFECTIVE UGE IN ROOT" s... 1632 8.5e-168 1
TAIR|locus:2123466 - symbol:UGE5 "UDP-D-glucose/UDP-D-gal... 697 1.0e-68 1
TAIR|locus:2014235 - symbol:RHD1 "ROOT HAIR DEFECTIVE 1" ... 692 3.5e-68 1
TAIR|locus:2138121 - symbol:UGE2 "UDP-D-glucose/UDP-D-gal... 678 1.1e-66 1
TIGR_CMR|BA_5700 - symbol:BA_5700 "UDP-glucose 4-epimeras... 659 1.1e-64 1
TIGR_CMR|CHY_0545 - symbol:CHY_0545 "UDP-glucose 4-epimer... 648 1.6e-63 1
TIGR_CMR|CJE_1273 - symbol:CJE_1273 "UDP-glucose 4-epimer... 639 1.4e-62 1
UNIPROTKB|Q9KLH0 - symbol:VC_A0774 "UDP-glucose 4-epimera... 628 2.1e-61 1
TIGR_CMR|VC_A0774 - symbol:VC_A0774 "UDP-glucose 4-epimer... 628 2.1e-61 1
TIGR_CMR|SO_1664 - symbol:SO_1664 "UDP-glucose 4-epimeras... 625 4.3e-61 1
TAIR|locus:2010371 - symbol:UGE1 "UDP-D-glucose/UDP-D-gal... 621 1.2e-60 1
DICTYBASE|DDB_G0275295 - symbol:galE "UDP-glucose 4-epime... 615 5.0e-60 1
FB|FBgn0035147 - symbol:Gale "UDP-galactose 4'-epimerase"... 610 1.7e-59 1
TAIR|locus:2015253 - symbol:UGE3 "UDP-D-glucose/UDP-D-gal... 600 1.9e-58 1
WB|WBGene00008132 - symbol:gale-1 species:6239 "Caenorhab... 592 1.4e-57 1
TIGR_CMR|GSU_2240 - symbol:GSU_2240 "UDP-glucose 4-epimer... 587 4.6e-57 1
UNIPROTKB|P09147 - symbol:galE species:83333 "Escherichia... 585 7.5e-57 1
UNIPROTKB|Q4QRB0 - symbol:Gale "Gale protein" species:101... 583 1.2e-56 1
TIGR_CMR|BA_5505 - symbol:BA_5505 "UDP-glucose 4-epimeras... 582 1.6e-56 1
UNIPROTKB|F1PI88 - symbol:GALE "Uncharacterized protein" ... 580 2.5e-56 1
MGI|MGI:1921496 - symbol:Gale "galactose-4-epimerase, UDP... 580 2.5e-56 1
ZFIN|ZDB-GENE-060421-6479 - symbol:gale "UDP-galactose-4-... 580 2.5e-56 1
UNIPROTKB|Q6A1A4 - symbol:galE "UDP-galactose 4-epimerase... 575 8.6e-56 1
UNIPROTKB|F1NWE5 - symbol:GALE "Uncharacterized protein" ... 571 2.3e-55 1
UNIPROTKB|I3LL84 - symbol:GALE "Uncharacterized protein" ... 568 4.8e-55 1
UNIPROTKB|Q3T105 - symbol:GALE "Uncharacterized protein" ... 566 7.8e-55 1
UNIPROTKB|Q14376 - symbol:GALE "UDP-glucose 4-epimerase" ... 564 1.3e-54 1
POMBASE|SPBC365.14c - symbol:uge1 "UDP-glucose 4-epimeras... 557 7.0e-54 1
TIGR_CMR|CPS_2147 - symbol:CPS_2147 "UDP-glucose 4-epimer... 550 3.8e-53 1
SGD|S000000223 - symbol:GAL10 "UDP-glucose-4-epimerase" s... 549 4.9e-53 1
CGD|CAL0000448 - symbol:GAL10 species:5476 "Candida albic... 534 1.9e-51 1
UNIPROTKB|Q59VY6 - symbol:GAL10 "Putative uncharacterized... 534 1.9e-51 1
RGD|621493 - symbol:Gale "UDP-galactose-4-epimerase" spec... 528 8.3e-51 1
POMBASE|SPBPB2B2.12c - symbol:gal10 species:4896 "Schizos... 503 3.7e-48 1
UNIPROTKB|G4MX57 - symbol:MGG_08012 "UDP-glucose 4-epimer... 501 6.0e-48 1
ASPGD|ASPL0000035245 - symbol:AN2951 species:162425 "Emer... 290 1.7e-47 3
ASPGD|ASPL0000073187 - symbol:ugeA species:162425 "Emeric... 384 1.5e-35 1
UNIPROTKB|Q5QPP3 - symbol:GALE "UDP-glucose 4-epimerase" ... 377 8.3e-35 1
UNIPROTKB|Q5QPP4 - symbol:GALE "UDP-glucose 4-epimerase" ... 324 1.3e-34 2
UNIPROTKB|Q5QPP2 - symbol:GALE "UDP-glucose 4-epimerase" ... 329 1.0e-29 1
UNIPROTKB|Q5QPP1 - symbol:GALE "UDP-glucose 4-epimerase" ... 325 2.7e-29 1
TIGR_CMR|CHY_0979 - symbol:CHY_0979 "dTDP-glucose 4,6-deh... 236 2.1e-28 2
TIGR_CMR|DET_0204 - symbol:DET_0204 "NAD-dependent epimer... 231 2.2e-27 2
UNIPROTKB|Q8E8H8 - symbol:wcvA "UDP-glucuronate 4-epimera... 274 6.8e-24 1
TIGR_CMR|SO_4686 - symbol:SO_4686 "NAD dependent epimeras... 274 6.8e-24 1
TIGR_CMR|CBU_0677 - symbol:CBU_0677 "NAD dependent epimer... 208 1.2e-23 2
UNIPROTKB|Q489C2 - symbol:CPS_0592 "Capsular polysacchari... 262 1.4e-22 1
TIGR_CMR|CPS_0592 - symbol:CPS_0592 "capsular polysacchar... 262 1.4e-22 1
TIGR_CMR|BA_1230 - symbol:BA_1230 "dTDP-glucose 4,6-dehyd... 213 2.5e-21 2
ZFIN|ZDB-GENE-030131-5718 - symbol:tgds "TDP-glucose 4,6-... 219 2.2e-19 2
UNIPROTKB|Q8ECF3 - symbol:wbpP "UDP-GlkcNAc C4 epimerase ... 243 2.4e-19 1
TIGR_CMR|SO_3189 - symbol:SO_3189 "polysaccharide biosynt... 243 2.4e-19 1
UNIPROTKB|F1RP60 - symbol:TGDS "Uncharacterized protein" ... 215 3.1e-19 2
MGI|MGI:1923605 - symbol:Tgds "TDP-glucose 4,6-dehydratas... 215 3.1e-19 2
TAIR|locus:2118711 - symbol:GAE1 "UDP-D-glucuronate 4-epi... 248 5.9e-19 1
TIGR_CMR|CJE_1513 - symbol:CJE_1513 "NAD-dependent epimer... 191 7.0e-19 2
RGD|1306544 - symbol:Tgds "TDP-glucose 4,6-dehydratase" s... 213 7.3e-19 2
TAIR|locus:2024902 - symbol:MUM4 "MUCILAGE-MODIFIED 4" sp... 203 1.4e-18 2
TAIR|locus:2050921 - symbol:GAE4 "UDP-D-glucuronate 4-epi... 245 1.5e-18 1
UNIPROTKB|A6QLW2 - symbol:TGDS "dTDP-D-glucose 4,6-dehydr... 208 1.6e-18 2
UNIPROTKB|O95455 - symbol:TGDS "dTDP-D-glucose 4,6-dehydr... 208 1.8e-18 2
UNIPROTKB|F1P029 - symbol:TGDS "Uncharacterized protein" ... 210 1.9e-18 2
TAIR|locus:2099372 - symbol:RHM3 "rhamnose biosynthesis 3... 199 2.4e-18 2
TIGR_CMR|GSU_2241 - symbol:GSU_2241 "capsular polysacchar... 236 2.5e-18 1
TIGR_CMR|CBU_0844 - symbol:CBU_0844 "capsular polysacchar... 235 4.0e-18 1
TIGR_CMR|CBU_0829 - symbol:CBU_0829 "NAD dependent epimer... 179 6.9e-18 2
UNIPROTKB|P29782 - symbol:strE "dTDP-glucose 4,6-dehydrat... 170 9.8e-18 2
UNIPROTKB|E2QWQ8 - symbol:TGDS "Uncharacterized protein" ... 197 5.2e-17 2
TIGR_CMR|CJE_1287 - symbol:CJE_1287 "ADP-L-glycero-D-mann... 160 6.6e-17 2
TAIR|locus:2126846 - symbol:GAE3 "UDP-D-glucuronate 4-epi... 230 8.9e-17 1
UNIPROTKB|A0QSK6 - symbol:rmlB "dTDP-glucose 4,6-dehydrat... 205 1.4e-16 2
TAIR|locus:2139134 - symbol:GAE5 "UDP-D-glucuronate 4-epi... 227 2.1e-16 1
UNIPROTKB|O06329 - symbol:rmlB "dTDP-glucose 4,6-dehydrat... 200 2.5e-16 2
UNIPROTKB|Q9ZAE8 - symbol:acbB "dTDP-glucose 4,6-dehydrat... 195 5.0e-16 2
UNIPROTKB|B0RVL0 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 177 5.3e-16 2
TAIR|locus:2025472 - symbol:GAE2 "UDP-D-glucuronate 4-epi... 220 1.4e-15 1
UNIPROTKB|Q47Y09 - symbol:CPS_3643 "NAD-dependent epimera... 216 1.4e-15 1
TIGR_CMR|CPS_3643 - symbol:CPS_3643 "NAD-dependent epimer... 216 1.4e-15 1
UNIPROTKB|P95780 - symbol:rmlB "dTDP-glucose 4,6-dehydrat... 214 2.7e-15 1
TIGR_CMR|GSU_2366 - symbol:GSU_2366 "dTDP-glucose 4,6-deh... 213 4.2e-15 1
UNIPROTKB|P0C7J0 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 169 1.2e-14 2
WB|WBGene00018737 - symbol:F53B1.4 species:6239 "Caenorha... 195 2.2e-14 2
TAIR|locus:2076066 - symbol:GAE6 "UDP-D-glucuronate 4-epi... 208 3.9e-14 1
UNIPROTKB|Q0BYW6 - symbol:HNE_2639 "UDP-glucuronate 5'-ep... 203 4.6e-14 1
TAIR|locus:2202960 - symbol:RHM1 "rhamnose biosynthesis 1... 206 1.4e-13 1
TIGR_CMR|GSU_1975 - symbol:GSU_1975 "NAD-dependent epimer... 193 7.5e-13 1
DICTYBASE|DDB_G0279465 - symbol:tgds "putative dTDP-D-glu... 194 1.4e-12 1
WB|WBGene00005019 - symbol:sqv-1 species:6239 "Caenorhabd... 194 1.6e-12 1
UNIPROTKB|Q0C421 - symbol:HNE_0794 "Putative GDP-6-deoxy-... 189 1.9e-12 1
TIGR_CMR|CBU_0676 - symbol:CBU_0676 "NAD dependent epimer... 188 3.0e-12 1
FB|FBgn0035848 - symbol:CG7979 species:7227 "Drosophila m... 169 3.5e-12 2
UNIPROTKB|P26391 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 144 5.2e-12 3
UNIPROTKB|P37777 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 147 5.7e-12 3
UNIPROTKB|F1SU22 - symbol:UXS1 "Uncharacterized protein" ... 186 8.6e-12 1
UNIPROTKB|E1BMI4 - symbol:UXS1 "Uncharacterized protein" ... 186 1.0e-11 1
TIGR_CMR|GSU_0626 - symbol:GSU_0626 "GDP-mannose 4,6-dehy... 183 1.3e-11 1
UNIPROTKB|P37759 - symbol:rfbB "RmlB" species:83333 "Esch... 146 1.6e-11 3
ZFIN|ZDB-GENE-020419-37 - symbol:uxs1 "UDP-glucuronic aci... 184 1.7e-11 1
UNIPROTKB|B3KV61 - symbol:UXS1 "UDP-glucuronate decarboxy... 181 2.5e-11 1
WARNING: Descriptions of 117 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2204639 [details] [associations]
symbol:MUR4 "MURUS 4" species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA;ISS] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=ISM;IDA] [GO:0006012 "galactose metabolic process"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=ISS] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0019567 "arabinose biosynthetic process" evidence=IMP]
[GO:0050373 "UDP-arabinose 4-epimerase activity" evidence=IDA]
[GO:0009723 "response to ethylene stimulus" evidence=RCA]
[GO:0009738 "abscisic acid mediated signaling pathway"
evidence=RCA] [GO:0035556 "intracellular signal transduction"
evidence=RCA] [GO:0052542 "defense response by callose deposition"
evidence=RCA] [GO:0009832 "plant-type cell wall biogenesis"
evidence=IMP] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
UniPathway:UPA00797 UniPathway:UPA00963 InterPro:IPR016040
GO:GO:0016021 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005794
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0032580
GO:GO:0045227 GO:GO:0009832 EMBL:AY195742 EMBL:AF083751
EMBL:AC007060 EMBL:AY064973 EMBL:BT002614 EMBL:AF325108
EMBL:AK220800 IPI:IPI00521995 PIR:E86431 RefSeq:NP_001031118.1
RefSeq:NP_174350.2 UniGene:At.20201 ProteinModelPortal:Q9SA77
SMR:Q9SA77 STRING:Q9SA77 PaxDb:Q9SA77 PRIDE:Q9SA77
EnsemblPlants:AT1G30620.1 EnsemblPlants:AT1G30620.2 GeneID:839942
KEGG:ath:AT1G30620 TAIR:At1g30620 eggNOG:COG1087
HOGENOM:HOG000168001 InParanoid:Q9SA77 KO:K12448 OMA:SHPNGYN
PhylomeDB:Q9SA77 ProtClustDB:CLSN2686084
BioCyc:MetaCyc:AT1G30620-MONOMER Genevestigator:Q9SA77
GermOnline:AT1G30620 GO:GO:0050373 GO:GO:0003978 GO:GO:0019567
GO:GO:0006012 GO:GO:0033358 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
Uniprot:Q9SA77
Length = 419
Score = 1759 (624.3 bits), Expect = 3.0e-181, P = 3.0e-181
Identities = 334/409 (81%), Positives = 360/409 (88%)
Query: 1 MLNFGRAXXXXXXXXXXSFGGLDYADPKRKSNFAGKFILAAALTALCIFLLKQXXXXXXX 60
M +FGRA S GGLDYADPK+K+N+ GK +L A+LTALCIF+LKQ
Sbjct: 1 MFSFGRARSQGRQNRSMSLGGLDYADPKKKNNYLGKILLTASLTALCIFMLKQSPTFNTP 60
Query: 61 XXXXQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE 120
+HE GVTHVLVTGGAGYIGSHAALRLLK+SYRVTIVDNLSRGN+ AV++LQELFPE
Sbjct: 61 SVFSRHEPGVTHVLVTGGAGYIGSHAALRLLKESYRVTIVDNLSRGNLAAVRILQELFPE 120
Query: 121 PGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVL 180
PGRLQFIYADLGDAKAVNK F+ENAFDAVMHFAAVAYVGEST PLKYYHNITSNTLVVL
Sbjct: 121 PGRLQFIYADLGDAKAVNKIFTENAFDAVMHFAAVAYVGESTQFPLKYYHNITSNTLVVL 180
Query: 181 ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
E+MA HGV TLIYSSTCATYGEP+ MPITEETPQ PINPYGKAKKMAEDIILDFSKNSDM
Sbjct: 181 ETMAAHGVKTLIYSSTCATYGEPDIMPITEETPQVPINPYGKAKKMAEDIILDFSKNSDM 240
Query: 241 AVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADG 300
AVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGI+ GL++KGTDY TADG
Sbjct: 241 AVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIMPGLQIKGTDYKTADG 300
Query: 301 TCVRDYIDVNDLVDAHVKALERAQPKKVGIYNVGTGKGRSVKEFVEACKKATSANIKVIY 360
TCVRDYIDV DLVDAHVKAL++A+P+KVGIYNVGTGKG SVKEFVEACKKAT IK+ Y
Sbjct: 301 TCVRDYIDVTDLVDAHVKALQKAKPRKVGIYNVGTGKGSSVKEFVEACKKATGVEIKIDY 360
Query: 361 EPRRPGDYAEVYSDPTKIRLELNWTAKYTNLQESLEIAWRWQKSHRGGY 409
PRR GDYAEVYSDP+KIR ELNWTAK+TNL+ESLE AWRWQK HR GY
Sbjct: 361 LPRRAGDYAEVYSDPSKIRKELNWTAKHTNLKESLETAWRWQKLHRNGY 409
>TAIR|locus:2163401 [details] [associations]
symbol:DUR "DEFECTIVE UGE IN ROOT" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0006012 "galactose
metabolic process" evidence=IEA] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
UniPathway:UPA00797 UniPathway:UPA00963 InterPro:IPR016040
GO:GO:0016021 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0032580 GO:GO:0045227
eggNOG:COG1087 HOGENOM:HOG000168001 KO:K12448
ProtClustDB:CLSN2686084 GO:GO:0050373 GO:GO:0003978 GO:GO:0006012
GO:GO:0033358 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 EMBL:AB017065 IPI:IPI00546765
RefSeq:NP_199261.1 UniGene:At.55356 ProteinModelPortal:Q9FI17
SMR:Q9FI17 STRING:Q9FI17 PaxDb:Q9FI17 PRIDE:Q9FI17
EnsemblPlants:AT5G44480.1 GeneID:834475 KEGG:ath:AT5G44480
TAIR:At5g44480 InParanoid:Q9FI17 OMA:VRWGPLE PhylomeDB:Q9FI17
Genevestigator:Q9FI17 GermOnline:AT5G44480 Uniprot:Q9FI17
Length = 436
Score = 1632 (579.6 bits), Expect = 8.5e-168, P = 8.5e-168
Identities = 312/393 (79%), Positives = 338/393 (86%)
Query: 19 FGGLDYADPKRKSNFAGKFILAAALTALCIFLLKQXXXXXXXXXXXQHEEGVTHVLVTGG 78
F +D +PK K+N GK +L A+L L I ++ Q Q EEGVTHVLVTGG
Sbjct: 43 FVEMDCLEPKTKNNLTGKLLLVASLLILAIIVISQSSSFTSPSAFSQREEGVTHVLVTGG 102
Query: 79 AGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVN 138
AGYIGSHAALRLL+DSYRVTIVDNLSRGN+GAVK LQ+LFP+ GRLQFIYADLGD AV
Sbjct: 103 AGYIGSHAALRLLRDSYRVTIVDNLSRGNLGAVKTLQQLFPQTGRLQFIYADLGDPLAVE 162
Query: 139 KFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCA 198
K FSENAFDAVMHFAAVAYVGESTL PLKYYHNITSNTL VLE+MARH V LIYSSTCA
Sbjct: 163 KIFSENAFDAVMHFAAVAYVGESTLYPLKYYHNITSNTLGVLEAMARHKVKKLIYSSTCA 222
Query: 199 TYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGR 258
TYGEPEKMPITE+TPQ PINPYGKAKKMAED+ILDFSKNSDMAVMILRYFNVIGSDP GR
Sbjct: 223 TYGEPEKMPITEDTPQVPINPYGKAKKMAEDMILDFSKNSDMAVMILRYFNVIGSDPGGR 282
Query: 259 LGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRDYIDVNDLVDAHVK 318
LGEAPRPELRE GRISGACFDAARG I GL+VKGTDY T+DGTC+RDYIDV DLVDAHVK
Sbjct: 283 LGEAPRPELREQGRISGACFDAARGFIPGLQVKGTDYKTSDGTCIRDYIDVTDLVDAHVK 342
Query: 319 ALERAQPKKVGIYNVGTGKGRSVKEFVEACKKATSANIKVIYEPRRPGDYAEVYSDPTKI 378
ALE+AQP+KVGIYNVGTGKGRSVKEFVEACKKAT IKV + PRRPGDYAEVYSDPTKI
Sbjct: 343 ALEKAQPRKVGIYNVGTGKGRSVKEFVEACKKATGVEIKVDFLPRRPGDYAEVYSDPTKI 402
Query: 379 RLELNWTAKYTNLQESLEIAWRWQKSHRGGYAS 411
+LNWTA++TNLQ+SL++AWRWQK H GY S
Sbjct: 403 LKDLNWTARFTNLQDSLQVAWRWQKIHPHGYNS 435
>TAIR|locus:2123466 [details] [associations]
symbol:UGE5 "UDP-D-glucose/UDP-D-galactose 4-epimerase 5"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IDA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IPI]
InterPro:IPR001509 InterPro:IPR005886 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214 InterPro:IPR016040
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006950 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
EMBL:AL161518 ProtClustDB:PLN02240 EMBL:AF080118 EMBL:AL049525
EMBL:AY065354 EMBL:AY117180 EMBL:AY140073 EMBL:AY085528
IPI:IPI00540537 PIR:T01881 PIR:T04291 RefSeq:NP_192834.1
UniGene:At.48845 ProteinModelPortal:Q9SN58 SMR:Q9SN58 IntAct:Q9SN58
STRING:Q9SN58 PaxDb:Q9SN58 PRIDE:Q9SN58 EnsemblPlants:AT4G10960.1
GeneID:826696 KEGG:ath:AT4G10960 TAIR:At4g10960 InParanoid:Q9SN58
OMA:ADKAWNA PhylomeDB:Q9SN58 Genevestigator:Q9SN58 Uniprot:Q9SN58
Length = 351
Score = 697 (250.4 bits), Expect = 1.0e-68, P = 1.0e-68
Identities = 148/344 (43%), Positives = 204/344 (59%)
Query: 72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG-RLQFIYAD 130
+VLV+GGAGYIGSH L+LL Y V +VDNL + +++ +++L E G RL F D
Sbjct: 5 NVLVSGGAGYIGSHTVLQLLLGGYSVVVVDNLDNSSAVSLQRVKKLAAEHGERLSFHQVD 64
Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT 190
L D A+ K FSE FDAV+HFA + VGES PL YY+N T+ +LE MA+HG
Sbjct: 65 LRDRSALEKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNLVGTITLLEVMAQHGCKN 124
Query: 191 LIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILD-FSKNSDMAVMILRYFN 249
L++SS+ YG P+++P TEE P + +NPYG+ K E+I D + + + +++LRYFN
Sbjct: 125 LVFSSSATVYGSPKEVPCTEEFPISALNPYGRTKLFIEEICRDVYGSDPEWKIILLRYFN 184
Query: 250 VIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRDYIDV 309
+G+ P G +GE PR + A G L V G DY+T DGT VRDYI V
Sbjct: 185 PVGAHPSGDIGEDPRGI---PNNLMPFVQQVAVGRRPHLTVFGNDYNTKDGTGVRDYIHV 241
Query: 310 NDLVDAHVKALERAQPKKVG--IYNVGTGKGRSVKEFVEACKKATSANIKVIYEPRRPGD 367
DL D H+ AL + + K+G +YN+GTG G SV E V+A +KA+ I ++ RRPGD
Sbjct: 242 IDLADGHIAALRKLEDCKIGCEVYNLGTGNGTSVLEMVDAFEKASGKKIPLVIAGRRPGD 301
Query: 368 YAEVYSDPTKIRLELNWTAKYTNLQESLEIAWRWQKSHRGGYAS 411
VY+ + ELNW AKY ++E W W ++ GY S
Sbjct: 302 AEVVYASTERAESELNWKAKY-GIEEMCRDLWNWASNNPYGYDS 344
>TAIR|locus:2014235 [details] [associations]
symbol:RHD1 "ROOT HAIR DEFECTIVE 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA;TAS] [GO:0005794 "Golgi apparatus"
evidence=ISM] [GO:0006012 "galactose metabolic process"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0010053 "root epidermal cell differentiation" evidence=IMP]
[GO:0009832 "plant-type cell wall biogenesis" evidence=TAS]
[GO:0009969 "xyloglucan biosynthetic process" evidence=IMP]
[GO:0010246 "rhamnogalacturonan I biosynthetic process"
evidence=IMP] [GO:0010306 "rhamnogalacturonan II biosynthetic
process" evidence=IMP] [GO:0005795 "Golgi stack" evidence=IDA]
[GO:0046983 "protein dimerization activity" evidence=IPI]
[GO:0042546 "cell wall biogenesis" evidence=IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0005795 GO:GO:0009832 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
GO:GO:0010053 EMBL:AC066689 GO:GO:0009969 HSSP:Q14376
ProtClustDB:PLN02240 EMBL:BT011226 EMBL:BT012154 IPI:IPI00537209
RefSeq:NP_176625.1 UniGene:At.25758 ProteinModelPortal:Q9C7W7
SMR:Q9C7W7 STRING:Q9C7W7 PaxDb:Q9C7W7 PRIDE:Q9C7W7
EnsemblPlants:AT1G64440.1 GeneID:842752 KEGG:ath:AT1G64440
TAIR:At1g64440 InParanoid:Q9C7W7 OMA:HVAGYKY PhylomeDB:Q9C7W7
Genevestigator:Q9C7W7 Uniprot:Q9C7W7
Length = 348
Score = 692 (248.7 bits), Expect = 3.5e-68, P = 3.5e-68
Identities = 142/346 (41%), Positives = 206/346 (59%)
Query: 70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIY- 128
V ++LVTGGAGYIGSH L+LL Y ++DNL ++ +++ +++L + G+ ++
Sbjct: 2 VGNILVTGGAGYIGSHTVLQLLLGGYNTVVIDNLDNSSLVSIQRVKDLAGDHGQNLTVHQ 61
Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV 188
DL D A+ K FSE FDAVMHFA + VGES PL YY+N T+ +LE MA HG
Sbjct: 62 VDLRDKPALEKVFSETKFDAVMHFAGLKAVGESVAKPLLYYNNNLIATITLLEVMAAHGC 121
Query: 189 DTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNS-DMAVMILRY 247
L++SS+ YG P+++P TEE+P + ++PYG+ K EDI D + + +++LRY
Sbjct: 122 KKLVFSSSATVYGWPKEVPCTEESPLSGMSPYGRTKLFIEDICRDVQRGDPEWRIIMLRY 181
Query: 248 FNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRDYI 307
FN +G+ P GR+GE P + G + LK+ GTDY+T DGT VRDYI
Sbjct: 182 FNPVGAHPSGRIGEDP---CGTPNNLMPYVQQVVVGRLPNLKIYGTDYTTKDGTGVRDYI 238
Query: 308 DVNDLVDAHVKALERAQPKKVG--IYNVGTGKGRSVKEFVEACKKATSANIKVIYEPRRP 365
V DL D H+ AL++ ++G +YN+GTGKG +V E V+A +KA+ I ++ RRP
Sbjct: 239 HVVDLADGHICALQKLDDTEIGCEVYNLGTGKGTTVLEMVDAFEKASGMKIPLVKVGRRP 298
Query: 366 GDYAEVYSDPTKIRLELNWTAKYTNLQESLEIAWRWQKSHRGGYAS 411
GD VY+ K ELNW A + ++E W W ++ GY S
Sbjct: 299 GDAETVYASTEKAERELNWKANF-GIEEMCRDQWNWASNNPFGYGS 343
>TAIR|locus:2138121 [details] [associations]
symbol:UGE2 "UDP-D-glucose/UDP-D-galactose 4-epimerase 2"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0046983 "protein dimerization activity" evidence=IPI]
[GO:0042546 "cell wall biogenesis" evidence=IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 UniPathway:UPA00214
InterPro:IPR016040 GO:GO:0005829 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087 HOGENOM:HOG000168001
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:AL078468 EMBL:AL161560 KO:K01784 GO:GO:0042546
ProtClustDB:PLN02240 EMBL:BT008539 IPI:IPI00516246 PIR:T08911
RefSeq:NP_194123.1 UniGene:At.3390 ProteinModelPortal:Q9T0A7
SMR:Q9T0A7 IntAct:Q9T0A7 STRING:Q9T0A7 PaxDb:Q9T0A7 PRIDE:Q9T0A7
EnsemblPlants:AT4G23920.1 GeneID:828492 KEGG:ath:AT4G23920
TAIR:At4g23920 InParanoid:Q9T0A7 OMA:THAPIDA PhylomeDB:Q9T0A7
Genevestigator:Q9T0A7 GermOnline:AT4G23920 Uniprot:Q9T0A7
Length = 350
Score = 678 (243.7 bits), Expect = 1.1e-66, P = 1.1e-66
Identities = 147/343 (42%), Positives = 199/343 (58%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG-RLQFIYADL 131
VLVTGGAGYIGSH L+LL+ Y +VDN + +++ +++L E G RL F DL
Sbjct: 5 VLVTGGAGYIGSHTVLQLLEGGYSAVVVDNYDNSSAASLQRVKKLAGENGNRLSFHQVDL 64
Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
D A+ K FSE FDAV+HFA + VGES PL YY+N T+ +LE MA++G L
Sbjct: 65 RDRPALEKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNIVGTVTLLEVMAQYGCKNL 124
Query: 192 IYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN-SDMAVMILRYFNV 250
++SS+ YG P+++P TEE+P + NPYG+ K E+I D ++ S+ +++LRYFN
Sbjct: 125 VFSSSATVYGWPKEVPCTEESPISATNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNP 184
Query: 251 IGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRDYIDVN 310
+G+ P G +GE P L + A G L V GTDY T DGT VRDYI V
Sbjct: 185 VGAHPSGYIGEDP---LGVPNNLMPYVQQVAVGRRPHLTVFGTDYKTKDGTGVRDYIHVM 241
Query: 311 DLVDAHVKALERAQPKKVG--IYNVGTGKGRSVKEFVEACKKATSANIKVIYEPRRPGDY 368
DL D H+ AL + K+ +YN+GTG G SV E V A +KA+ I ++ RRPGD
Sbjct: 242 DLADGHIAALRKLDDLKISCEVYNLGTGNGTSVLEMVAAFEKASGKKIPLVMAGRRPGDA 301
Query: 369 AEVYSDPTKIRLELNWTAKYTNLQESLEIAWRWQKSHRGGYAS 411
VY+ K ELNW AK ++E W W ++ GY S
Sbjct: 302 EVVYASTEKAERELNWKAK-NGIEEMCRDLWNWASNNPYGYNS 343
>TIGR_CMR|BA_5700 [details] [associations]
symbol:BA_5700 "UDP-glucose 4-epimerase" species:198094
"Bacillus anthracis str. Ames" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:Q14376 RefSeq:NP_847846.1 RefSeq:YP_022385.1
RefSeq:YP_031541.1 ProteinModelPortal:Q81JK4 SMR:Q81JK4
DNASU:1085447 EnsemblBacteria:EBBACT00000009571
EnsemblBacteria:EBBACT00000018180 EnsemblBacteria:EBBACT00000022977
GeneID:1085447 GeneID:2816576 GeneID:2853003 KEGG:ban:BA_5700
KEGG:bar:GBAA_5700 KEGG:bat:BAS5304 OMA:TENNIDW
ProtClustDB:CLSK888129 BioCyc:BANT260799:GJAJ-5377-MONOMER
BioCyc:BANT261594:GJ7F-5553-MONOMER Uniprot:Q81JK4
Length = 338
Score = 659 (237.0 bits), Expect = 1.1e-64, P = 1.1e-64
Identities = 140/342 (40%), Positives = 204/342 (59%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
+L+TGGAGYIGSH + LL ++Y++ +VDNLS +I ++ ++E+ + + +F ++
Sbjct: 3 ILITGGAGYIGSHTCVELLNNNYKIIVVDNLSNSSIESLNRVKEITGK--QFEFYKENVL 60
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
+ + +N+ F EN +AV+HFA VGEST PL YY+N + +V+ + M +H V I
Sbjct: 61 NREKMNEIFLENNIEAVIHFAGFKAVGESTTTPLAYYYNNIISAIVLCDVMQKHNVKNFI 120
Query: 193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSD-MAVMILRYFNVI 251
+SS+ YG P+ +PITEE P + NPYG+ K M E I+ D +K D ++ +LRYFN
Sbjct: 121 FSSSATVYGIPKTLPITEEFPLSVTNPYGQTKLMIEQIMRDVAKADDEWSIALLRYFNPF 180
Query: 252 GSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRDYIDVND 311
G+ GR+GE P + A G + L + G DY T DGT VRDYI V D
Sbjct: 181 GAHQSGRIGEDPNGI---PNNLMPYVTQVAVGKLKELNIFGNDYPTKDGTGVRDYIHVVD 237
Query: 312 LVDAHVKALERA-QPKKVGIYNVGTGKGRSVKEFVEACKKATSANIKVIYEPRRPGDYAE 370
L HVKALE+ + K + YN+GTGKG SV E V+A +K + I RRPGD A
Sbjct: 238 LAKGHVKALEKVLKTKGIEAYNLGTGKGYSVLEMVKAFEKVSGKKIPYKVIGRRPGDVAI 297
Query: 371 VYSDPTKIRLELNWTAKYTNLQESLEIAWRWQKSHRGGYASI 412
++D +K + EL W A+Y L+E +WRWQ +++ GY I
Sbjct: 298 CFADVSKAKRELGWEAEY-GLEEMCVDSWRWQVNNKNGYQMI 338
>TIGR_CMR|CHY_0545 [details] [associations]
symbol:CHY_0545 "UDP-glucose 4-epimerase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=ISS] [GO:0006012 "galactose
metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
RefSeq:YP_359403.1 ProteinModelPortal:Q3AEN1 SMR:Q3AEN1
STRING:Q3AEN1 GeneID:3728483 KEGG:chy:CHY_0545 PATRIC:21274237
OMA:DTEDGSC BioCyc:CHYD246194:GJCN-546-MONOMER Uniprot:Q3AEN1
Length = 327
Score = 648 (233.2 bits), Expect = 1.6e-63, P = 1.6e-63
Identities = 140/337 (41%), Positives = 194/337 (57%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
+LVTGGAGYIGSH +L + +V +VDNLS+G+ AV R + I D G
Sbjct: 2 ILVTGGAGYIGSHIVRQLCLKNEKVLVVDNLSKGHKKAVDT---------RAKLIVGDFG 52
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
D + + F + AV+H AA + VGES P KY+ S TL +L+ M + V ++
Sbjct: 53 DENLLLEIFKKYDIKAVIHMAAQSLVGESMSQPEKYFEENISKTLSLLKVMLKANVKKMV 112
Query: 193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIG 252
+SST A YGEPEK PITE+ PQ P N YG +K + E + + + + LRYFN G
Sbjct: 113 FSSTAAVYGEPEKWPITEDFPQKPTNVYGYSKLVIEQCLEWYRQIHGFNYVSLRYFNAAG 172
Query: 253 SDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRDYIDVNDL 312
+DP G +GE PE H + F G L V GTDY T DGTC+RDYI VNDL
Sbjct: 173 ADPSGDIGEDHNPET--H--LIPLIFKVILGEQEELTVFGTDYPTPDGTCIRDYIHVNDL 228
Query: 313 VDAHVKALERAQPKKVGIYNVGTGKGRSVKEFVEACKKATSANIKVIYEPRRPGDYAEVY 372
+AH+ AL + + G+YN+G KG SVKE ++ ++ T +KV Y RRPGD A +
Sbjct: 229 AEAHILALNKLNKDESGVYNLGNQKGFSVKEIIKVAEEVTGVKVKVRYGQRRPGDPAVLV 288
Query: 373 SDPTKIRLELNWTAKYTNLQESLEIAWRWQKSHRGGY 409
+ KI+ ELN+T K+ +++ ++ AW W K++ GY
Sbjct: 289 ASSEKIQKELNFTPKFGDIKTIVQTAWEWHKNNPRGY 325
>TIGR_CMR|CJE_1273 [details] [associations]
symbol:CJE_1273 "UDP-glucose 4-epimerase" species:195099
"Campylobacter jejuni RM1221" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0044237
eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 KO:K01784 RefSeq:YP_179261.1
ProteinModelPortal:Q5HTX4 STRING:Q5HTX4 GeneID:3231780
KEGG:cjr:CJE1273 PATRIC:20044342 OMA:MMSERIL ProtClustDB:CLSK879103
BioCyc:CJEJ195099:GJC0-1299-MONOMER Uniprot:Q5HTX4
Length = 328
Score = 639 (230.0 bits), Expect = 1.4e-62, P = 1.4e-62
Identities = 138/333 (41%), Positives = 203/333 (60%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
+L++GGAGYIGSH + LK + + ++DNLS+G+ A++ LQ++ +F DL
Sbjct: 3 ILISGGAGYIGSHTLRQFLKTDHEICVLDNLSKGSKIAIEDLQKI----RAFKFFEQDLS 58
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
D + V F FDA++HFAA V ES +PLKYY N T NT ++E+ + GV+ I
Sbjct: 59 DFQGVKALFEREKFDAIVHFAASIEVFESMQNPLKYYMNNTVNTTNLIETCLQTGVNKFI 118
Query: 193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSK-NSDMAVMILRYFNVI 251
+SST ATYGEP+ ++E +P APINPYG++K M+E+++ D S N + ILRYFNV
Sbjct: 119 FSSTAATYGEPQTPVVSETSPLAPINPYGRSKLMSEEVLRDASMANPEFKHCILRYFNVA 178
Query: 252 GSDPEGRLGEA-PRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRDYIDVN 310
G+ + LG+ P+ L +++ C A G L + G DY T DGTC+RD+I V+
Sbjct: 179 GACMDYTLGQRYPKATLLI--KVAAEC---AAGKRDKLFIFGDDYDTKDGTCIRDFIHVD 233
Query: 311 DLVDAHVKALERAQPKKVGIYNVGTGKGRSVKEFVEACKKATSANIKVIYEPRRPGDYAE 370
D+ AH+ L+ Q + ++NVG G G SVKE +EA KK + + KV PRR GD +
Sbjct: 234 DISSAHLATLDYLQENESNVFNVGYGHGFSVKEVIEAMKKVSGVDFKVELAPRRAGDPSV 293
Query: 371 VYSDPTKIRLELNWTAKYTNLQESLEIAWRWQK 403
+ SD +KIR +W KY +L+ + A+ W+K
Sbjct: 294 LISDASKIRNLTSWQPKYDDLELICKSAFDWEK 326
>UNIPROTKB|Q9KLH0 [details] [associations]
symbol:VC_A0774 "UDP-glucose 4-epimerase" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=ISS] [GO:0006012
"galactose metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 HSSP:P09147 PIR:F82419
RefSeq:NP_233160.1 ProteinModelPortal:Q9KLH0 SMR:Q9KLH0
DNASU:2612322 GeneID:2612322 KEGG:vch:VCA0774 PATRIC:20086102
OMA:NIDIRNK ProtClustDB:CLSK869762 Uniprot:Q9KLH0
Length = 338
Score = 628 (226.1 bits), Expect = 2.1e-61, P = 2.1e-61
Identities = 136/339 (40%), Positives = 193/339 (56%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
VLVTGG GYIGSH +++++ I+DNL + + ++++ R QF+ D+
Sbjct: 3 VLVTGGMGYIGSHTCIQMIQAGMTPVILDNLYNSKVTVLDRIEKVIGV--RPQFVQGDIR 60
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
D + ++ +AV+HFA + VGES PL+YY N + TLV++ +M GV +L+
Sbjct: 61 DKALLVDLMQQHNIEAVVHFAGLKAVGESVQKPLEYYDNNVNGTLVLVAAMREAGVKSLV 120
Query: 193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSK-NSDMAVMILRYFNVI 251
+SS+ YGEP +PITE P NPYG++K M E+ + DF K N D ++ +LRYFN +
Sbjct: 121 FSSSATVYGEPTSVPITESFPTKAANPYGRSKLMVEECLTDFQKANPDWSITLLRYFNPV 180
Query: 252 GSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRDYIDVND 311
GS P G LGE P+ + A G L V G+DY T DGT VRDYI V D
Sbjct: 181 GSHPSGELGEDPQGI---PNNLMPFVTQVAVGRREYLSVFGSDYPTKDGTGVRDYIHVMD 237
Query: 312 LVDAHVKALERAQP-KKVGIYNVGTGKGRSVKEFVEACKKATSANIKVIYEPRRPGDYAE 370
L D H+ AL++ + IYN+GTGKG SV + V+A + A+ + RRPGD AE
Sbjct: 238 LADGHIAALKKVGTCAGLHIYNLGTGKGYSVLDVVKAFETASGRTVPYKLVDRRPGDIAE 297
Query: 371 VYSDPTKIRLELNWTAKYTNLQESLEIAWRWQKSHRGGY 409
++DPTK +L W A NL + AW WQ ++ GY
Sbjct: 298 YWADPTKAAQDLGWKAT-RNLHTMAQDAWCWQSNNPQGY 335
>TIGR_CMR|VC_A0774 [details] [associations]
symbol:VC_A0774 "UDP-glucose 4-epimerase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=ISS] [GO:0006012 "galactose
metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 HSSP:P09147 PIR:F82419
RefSeq:NP_233160.1 ProteinModelPortal:Q9KLH0 SMR:Q9KLH0
DNASU:2612322 GeneID:2612322 KEGG:vch:VCA0774 PATRIC:20086102
OMA:NIDIRNK ProtClustDB:CLSK869762 Uniprot:Q9KLH0
Length = 338
Score = 628 (226.1 bits), Expect = 2.1e-61, P = 2.1e-61
Identities = 136/339 (40%), Positives = 193/339 (56%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
VLVTGG GYIGSH +++++ I+DNL + + ++++ R QF+ D+
Sbjct: 3 VLVTGGMGYIGSHTCIQMIQAGMTPVILDNLYNSKVTVLDRIEKVIGV--RPQFVQGDIR 60
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
D + ++ +AV+HFA + VGES PL+YY N + TLV++ +M GV +L+
Sbjct: 61 DKALLVDLMQQHNIEAVVHFAGLKAVGESVQKPLEYYDNNVNGTLVLVAAMREAGVKSLV 120
Query: 193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSK-NSDMAVMILRYFNVI 251
+SS+ YGEP +PITE P NPYG++K M E+ + DF K N D ++ +LRYFN +
Sbjct: 121 FSSSATVYGEPTSVPITESFPTKAANPYGRSKLMVEECLTDFQKANPDWSITLLRYFNPV 180
Query: 252 GSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRDYIDVND 311
GS P G LGE P+ + A G L V G+DY T DGT VRDYI V D
Sbjct: 181 GSHPSGELGEDPQGI---PNNLMPFVTQVAVGRREYLSVFGSDYPTKDGTGVRDYIHVMD 237
Query: 312 LVDAHVKALERAQP-KKVGIYNVGTGKGRSVKEFVEACKKATSANIKVIYEPRRPGDYAE 370
L D H+ AL++ + IYN+GTGKG SV + V+A + A+ + RRPGD AE
Sbjct: 238 LADGHIAALKKVGTCAGLHIYNLGTGKGYSVLDVVKAFETASGRTVPYKLVDRRPGDIAE 297
Query: 371 VYSDPTKIRLELNWTAKYTNLQESLEIAWRWQKSHRGGY 409
++DPTK +L W A NL + AW WQ ++ GY
Sbjct: 298 YWADPTKAAQDLGWKAT-RNLHTMAQDAWCWQSNNPQGY 335
>TIGR_CMR|SO_1664 [details] [associations]
symbol:SO_1664 "UDP-glucose 4-epimerase" species:211586
"Shewanella oneidensis MR-1" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0005975 "carbohydrate metabolic
process" evidence=ISS] InterPro:IPR001509 InterPro:IPR005886
Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:P09147 RefSeq:NP_717275.1 ProteinModelPortal:Q8EGE0
GeneID:1169457 KEGG:son:SO_1664 PATRIC:23522965 OMA:CGKSIAY
ProtClustDB:CLSK906369 Uniprot:Q8EGE0
Length = 337
Score = 625 (225.1 bits), Expect = 4.3e-61, P = 4.3e-61
Identities = 137/341 (40%), Positives = 200/341 (58%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
+LVTGGAGYIG+H + LL V ++DNLS +I A+ ++ + + + F D+
Sbjct: 3 ILVTGGAGYIGTHTVVELLNAGSEVIVLDNLSNSSIEALDRVERITGKS--VTFYQGDIL 60
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
+ + K FS+++ DAV+HFA + VGES PLKYY N + TL++ + MA V L+
Sbjct: 61 NKALLQKVFSDHSIDAVIHFAGLKAVGESVAKPLKYYENNVTGTLILCQVMAEFKVKNLV 120
Query: 193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMI--LRYFNV 250
+SS+ YG+P +PITE+ P NPYG++K M E I+ D +SD + I LRYFN
Sbjct: 121 FSSSATVYGDPASLPITEDFPTGATNPYGQSKLMVEHILADLH-HSDPSWNIARLRYFNP 179
Query: 251 IGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRDYIDVN 310
+G+ G +GE P ++ + + A G L V G DY T DGT VRDYI V
Sbjct: 180 VGAHASGLIGEDPN-DIPNN--LMPFIAQVAVGKREALSVFGNDYPTHDGTGVRDYIHVV 236
Query: 311 DLVDAHVKALERAQPKKVGI--YNVGTGKGRSVKEFVEACKKATSANIKVIYEPRRPGDY 368
DL H+KALE+ K G+ YN+GTG+G SV + V+A +KA +I + PRRPGD
Sbjct: 237 DLAIGHLKALEKLATKP-GLVTYNLGTGQGYSVLDMVKAFEKACGKSIAYLIAPRRPGDI 295
Query: 369 AEVYSDPTKIRLELNWTAKYTNLQESLEIAWRWQKSHRGGY 409
A Y+DP + +L+W A ++ L++ +W WQ ++ GY
Sbjct: 296 AACYADPDHAKTDLDWQATHS-LEDMANSSWHWQSTNPNGY 335
>TAIR|locus:2010371 [details] [associations]
symbol:UGE1 "UDP-D-glucose/UDP-D-galactose 4-epimerase 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=IDA;TAS] [GO:0046983 "protein
dimerization activity" evidence=IPI] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0046369 "galactose biosynthetic process"
evidence=IDA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214
InterPro:IPR016040 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005829 GO:GO:0005886 GO:GO:0006950 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 EMBL:AC012187
eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 KO:K01784 EMBL:Z54214 EMBL:AF334724
EMBL:AY054207 EMBL:AY120709 EMBL:BT000032 IPI:IPI00533120
PIR:B86261 PIR:S62783 RefSeq:NP_172738.1 UniGene:At.20506
UniGene:At.27284 ProteinModelPortal:Q42605 SMR:Q42605 IntAct:Q42605
STRING:Q42605 PaxDb:Q42605 PRIDE:Q42605 EnsemblPlants:AT1G12780.1
GeneID:837834 KEGG:ath:AT1G12780 TAIR:At1g12780 InParanoid:Q42605
OMA:CEAILAD PhylomeDB:Q42605 ProtClustDB:PLN02240
BioCyc:ARA:AT1G12780-MONOMER BioCyc:MetaCyc:AT1G12780-MONOMER
Genevestigator:Q42605 GermOnline:AT1G12780 Uniprot:Q42605
Length = 351
Score = 621 (223.7 bits), Expect = 1.2e-60, P = 1.2e-60
Identities = 136/345 (39%), Positives = 197/345 (57%)
Query: 72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELF-PEPGR-LQFIYA 129
++LVTGGAG+IG+H ++LLKD ++V+I+DN I AV ++EL P+ + L F
Sbjct: 8 NILVTGGAGFIGTHTVVQLLKDGFKVSIIDNFDNSVIEAVDRVRELVGPDLSKKLDFNLG 67
Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD 189
DL + + K FS+ FDAV+HFA + VGES +P +Y+ N T+ + E+MA++
Sbjct: 68 DLRNKGDIEKLFSKQRFDAVIHFAGLKAVGESVENPRRYFDNNLVGTINLYETMAKYNCK 127
Query: 190 TLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSK-NSDMAVMILRYF 248
+++SS+ YG+PEK+P E+ +NPYG+ K E+I D K + +++LRYF
Sbjct: 128 MMVFSSSATVYGQPEKIPCMEDFELKAMNPYGRTKLFLEEIARDIQKAEPEWRIILLRYF 187
Query: 249 NVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRDYID 308
N +G+ G +GE P+ + A G + L V G DY T DG+ VRDYI
Sbjct: 188 NPVGAHESGSIGEDPKGI---PNNLMPYIQQVAVGRLPELNVYGHDYPTEDGSAVRDYIH 244
Query: 309 VNDLVDAHVKALER--AQPKKVGI--YNVGTGKGRSVKEFVEACKKATSANIKVIYEPRR 364
V DL D H+ AL + A PK +G YN+GTG+G SV E V A +KA+ I + PRR
Sbjct: 245 VMDLADGHIAALRKLFADPK-IGCTAYNLGTGQGTSVLEMVAAFEKASGKKIPIKLCPRR 303
Query: 365 PGDYAEVYSDPTKIRLELNWTAKYTNLQESLEIAWRWQKSHRGGY 409
GD VY+ K EL W AKY + E W+W ++ GY
Sbjct: 304 SGDATAVYASTEKAEKELGWKAKY-GVDEMCRDQWKWANNNPWGY 347
>DICTYBASE|DDB_G0275295 [details] [associations]
symbol:galE "UDP-glucose 4-epimerase" species:44689
"Dictyostelium discoideum" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0016857 "racemase and epimerase activity, acting
on carbohydrates and derivatives" evidence=IEA] [GO:0006012
"galactose metabolic process" evidence=IEA] [GO:0005975
"carbohydrate metabolic process" evidence=IEA] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016853 "isomerase activity" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
UniPathway:UPA00214 InterPro:IPR016040 dictyBase:DDB_G0275295
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GenomeReviews:CM000151_GR EMBL:AAFI02000013 GO:GO:0044237
eggNOG:COG1087 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:P04397 OMA:ADKAWNA RefSeq:XP_643834.1
ProteinModelPortal:Q553X7 SMR:Q553X7 STRING:Q553X7
EnsemblProtists:DDB0231575 GeneID:8619881 KEGG:ddi:DDB_G0275295
ProtClustDB:CLSZ2729193 Uniprot:Q553X7
Length = 344
Score = 615 (221.5 bits), Expect = 5.0e-60, P = 5.0e-60
Identities = 132/341 (38%), Positives = 197/341 (57%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
++VTGGAGYIGSH + L++ Y IVDNLS ++ A+K ++ + + ++F + D+
Sbjct: 8 IMVTGGAGYIGSHTVIELIEAGYTPVIVDNLSNSSLEAIKRVESITGK--EIEFHHVDIM 65
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
+ KA+++ F +V+HFA + VGES PLKYY+N + TL +L M +H V L+
Sbjct: 66 NEKALDEIFETGNIRSVIHFAGLKAVGESNKLPLKYYNNNIAGTLTLLNLMDKHRVKKLV 125
Query: 193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDF-SKNSDMAVMILRYFNVI 251
+SS+ YG+P +PITE+ P + NPYG+ K E I+ D + + + ++LRYFN +
Sbjct: 126 FSSSATVYGDPHTVPITEDFPLSATNPYGRTKLYVEGILQDLCASDPEWNCIMLRYFNPV 185
Query: 252 GSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRDYIDVND 311
G+ P G +GE P+ ++ + + A G L + G DY+T DGT VRD+I V D
Sbjct: 186 GAHPSGLIGEDPK-DIPNN--LMPYVTQTAIGKRPILSIFGNDYNTPDGTGVRDFIHVVD 242
Query: 312 LVDAHVKALERAQPKKVGI--YNVGTGKGRSVKEFVEACKKATSANIKVIYEPRRPGDYA 369
L H+ AL KK G YN+GTG+G SV E V A K+A+ I RR GD A
Sbjct: 243 LAKGHISALSSLHSKKQGCVAYNLGTGRGYSVLEMVGALKQASHKEIPYQIVSRRKGDVA 302
Query: 370 EVYSDPTKIRLELNWTAKYTNLQESLEIAWRWQKSHRGGYA 410
++DP+K EL W A + N + AW+WQ + GY+
Sbjct: 303 SSFADPSKALKELGWKATH-NQDDMCRDAWKWQSLNPNGYS 342
>FB|FBgn0035147 [details] [associations]
symbol:Gale "UDP-galactose 4'-epimerase" species:7227
"Drosophila melanogaster" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS;IMP;NAS] [GO:0006012 "galactose metabolic
process" evidence=IMP;NAS] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
UniPathway:UPA00214 InterPro:IPR016040 EMBL:AE014296 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
GeneTree:ENSGT00530000063128 OMA:ADKAWNA EMBL:AY058582
RefSeq:NP_001246537.1 RefSeq:NP_612044.1 UniGene:Dm.4155
ProteinModelPortal:Q9W0P5 SMR:Q9W0P5 DIP:DIP-20343N IntAct:Q9W0P5
MINT:MINT-914196 STRING:Q9W0P5 PaxDb:Q9W0P5 PRIDE:Q9W0P5
EnsemblMetazoa:FBtr0072556 EnsemblMetazoa:FBtr0306917 GeneID:38076
KEGG:dme:Dmel_CG12030 UCSC:CG12030-RA CTD:2582 FlyBase:FBgn0035147
InParanoid:Q9W0P5 OrthoDB:EOG473N6Z PhylomeDB:Q9W0P5
GenomeRNAi:38076 NextBio:806870 Bgee:Q9W0P5 GermOnline:CG12030
Uniprot:Q9W0P5
Length = 350
Score = 610 (219.8 bits), Expect = 1.7e-59, P = 1.7e-59
Identities = 143/348 (41%), Positives = 192/348 (55%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQEL--FPE-PGR-LQFIY 128
VLVTGGAGYIGSH L +L Y V VDNL K+ + L E G+ + F
Sbjct: 6 VLVTGGAGYIGSHTVLEMLNAGYNVICVDNLCNAYSSGAKLPEALSRVQEITGKKVNFYR 65
Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV 188
D+ D + V F E+ D V HFAA+ VGES PL+YYHN + T V+LE+MA + V
Sbjct: 66 VDITDREQVRSVFQEHKIDMVAHFAALKAVGESCRIPLQYYHNNMTGTNVLLEAMADNNV 125
Query: 189 DTLIYSSTCATYGEPEKMPITEETPQAPI-NPYGKAKKMAEDIILDFSKNSDM-AVMILR 246
+YSS+ YGEP+ +P+TEE P +PYGK K E+I+ D K+ AV+ LR
Sbjct: 126 FKFVYSSSATVYGEPKFLPVTEEHPTGNCTSPYGKTKYFTEEILKDLCKSDKRWAVVSLR 185
Query: 247 YFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRDY 306
YFN +G+ GR+GE P E + A G L V G+D+ T DGT VRDY
Sbjct: 186 YFNPVGAHISGRIGEDPNGE---PNNLMPYIAQVAVGRRPSLSVYGSDFPTHDGTGVRDY 242
Query: 307 IDVNDLVDAHVKALERAQP-KKVGI--YNVGTGKGRSVKEFVEACKKATSANIKVIYEPR 363
I + DL + HVKAL++ + + G YN+GTG G SV + V+A +KA+ + R
Sbjct: 243 IHIVDLAEGHVKALDKLRNIAETGFFAYNLGTGVGYSVLDMVKAFEKASGKKVNYTLVDR 302
Query: 364 RPGDYAEVYSDPTKIRLELNWTAKYTNLQESLEIAWRWQKSHRGGYAS 411
R GD A Y+D T +L W A+ + + E WRWQ + GYA+
Sbjct: 303 RSGDVATCYADATLADKKLGWKAE-RGIDKMCEDTWRWQSQNPNGYAN 349
>TAIR|locus:2015253 [details] [associations]
symbol:UGE3 "UDP-D-glucose/UDP-D-galactose 4-epimerase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IPI] [GO:0009555 "pollen development" evidence=IMP]
InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 EMBL:CP002684 GO:GO:0009555 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 HSSP:Q14376
ProtClustDB:PLN02240 EMBL:AY085887 EMBL:BT024882 EMBL:AK117913
IPI:IPI00534992 RefSeq:NP_564811.1 UniGene:At.36168
ProteinModelPortal:Q8LDN8 SMR:Q8LDN8 STRING:Q8LDN8 PRIDE:Q8LDN8
EnsemblPlants:AT1G63180.1 GeneID:842622 KEGG:ath:AT1G63180
TAIR:At1g63180 InParanoid:Q8LDN8 OMA:FWADASL PhylomeDB:Q8LDN8
Genevestigator:Q8LDN8 Uniprot:Q8LDN8
Length = 351
Score = 600 (216.3 bits), Expect = 1.9e-58, P = 1.9e-58
Identities = 131/344 (38%), Positives = 192/344 (55%)
Query: 72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELF-PEPG-RLQFIYA 129
++LVTGGAG+IG+H ++LL ++VTI+DNL + AV ++EL P+ +L+F
Sbjct: 8 NILVTGGAGFIGTHTVVQLLNQGFKVTIIDNLDNSVVEAVHRVRELVGPDLSTKLEFNLG 67
Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD 189
DL + + K FS FDAV+HFA + VGES +P +Y+ N T+ + E+MA++
Sbjct: 68 DLRNKGDIEKLFSNQRFDAVIHFAGLKAVGESVGNPRRYFDNNLVGTINLYETMAKYNCK 127
Query: 190 TLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDF-SKNSDMAVMILRYF 248
+++SS+ YG+PE +P E+ +NPYG+ K E+I D + + +++LRYF
Sbjct: 128 MMVFSSSATVYGQPEIVPCVEDFELQAMNPYGRTKLFLEEIARDIHAAEPEWKIILLRYF 187
Query: 249 NVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRDYID 308
N +G+ GR+GE P+ + A G + L V G DY T DG+ VRDYI
Sbjct: 188 NPVGAHESGRIGEDPKGI---PNNLMPYIQQVAVGRLPELNVFGHDYPTMDGSAVRDYIH 244
Query: 309 VNDLVDAHVKALERA-QPKKVGI--YNVGTGKGRSVKEFVEACKKATSANIKVIYEPRRP 365
V DL D HV AL + K+G YN+GTG+G SV E V + +KA+ I + PRR
Sbjct: 245 VMDLADGHVAALNKLFSDSKIGCTAYNLGTGQGTSVLEMVSSFEKASGKKIPIKLCPRRA 304
Query: 366 GDYAEVYSDPTKIRLELNWTAKYTNLQESLEIAWRWQKSHRGGY 409
GD VY+ K EL W AKY + E W W + G+
Sbjct: 305 GDATAVYASTQKAEKELGWKAKY-GVDEMCRDQWNWANKNPWGF 347
>WB|WBGene00008132 [details] [associations]
symbol:gale-1 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0016616 "oxidoreductase activity, acting on the
CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0009058
"biosynthetic process" evidence=IEA] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=IEA] [GO:0006012 "galactose
metabolic process" evidence=IEA] [GO:0008831
"dTDP-4-dehydrorhamnose reductase activity" evidence=IEA]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=IEA] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0016857 "racemase and epimerase activity, acting
on carbohydrates and derivatives" evidence=IEA] [GO:0042335
"cuticle development" evidence=IGI;IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0042335 GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
GeneTree:ENSGT00530000063128 OMA:THAPIDA EMBL:Z99709 GeneID:173171
KEGG:cel:CELE_C47B2.6 UCSC:C47B2.6b CTD:173171 NextBio:878565
RefSeq:NP_001021052.1 ProteinModelPortal:Q564Q1 SMR:Q564Q1
STRING:Q564Q1 PRIDE:Q564Q1 EnsemblMetazoa:C47B2.6b
WormBase:C47B2.6b InParanoid:Q564Q1 ArrayExpress:Q564Q1
Uniprot:Q564Q1
Length = 349
Score = 592 (213.5 bits), Expect = 1.4e-57, P = 1.4e-57
Identities = 136/354 (38%), Positives = 196/354 (55%)
Query: 72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR--------GNIGAVKVLQELFPEPGR 123
H+LVTG AG+IGSH L LL Y V +DN + GN ++K + +L +
Sbjct: 2 HILVTGAAGFIGSHTVLELLNSGYTVLCIDNFANAISVTDEHGNAISLKRVAQLTGKD-- 59
Query: 124 LQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESM 183
+ F D+ D A+ K FSEN FD ++H AA+ VGES PL+YY N +L +++
Sbjct: 60 VPFQNVDVCDEAALEKVFSENKFDGIIHLAALKAVGESVAKPLQYYSNNLVASLNLIQMC 119
Query: 184 ARHGVDTLIYSSTCATYGEPEKMPITE--ETPQAPINPYGKAKKMAEDIILDFSK-NSDM 240
++ V ++SS+ YG P ++PITE +T Q NPYG+ K M E I++D K N +
Sbjct: 120 LKYNVKNFVFSSSATVYGPPSELPITEKSQTGQGITNPYGQTKYMMEQILIDVGKANPEW 179
Query: 241 AVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADG 300
V++LRYFN +G+ G +GE P+ + A G + L + G + T DG
Sbjct: 180 NVVLLRYFNPVGAHKSGLIGEDPKGV---PNNLMPYVSQVAIGKLPVLTIYGDQFDTVDG 236
Query: 301 TCVRDYIDVNDLVDAHVKALERAQPK-KVG--IYNVGTGKGRSVKEFVEACKKATSANIK 357
T VRDYI V DL HVKA +R + +G IYN+GTG G SV++ V+A KK + +I
Sbjct: 237 TGVRDYIHVVDLAKGHVKAFDRIKTVGNIGTEIYNLGTGVGYSVRQMVDALKKVSGRDIP 296
Query: 358 VIYEPRRPGDYAEVYSDPTKIRLELNWTAKYTNLQESLEIAWRWQKSHRGGYAS 411
V RPGD A VY DP+ + +L W A+ T L+E W WQ + G+++
Sbjct: 297 VKIGVPRPGDVASVYCDPSLAQEKLGWRAE-TGLEEMCADLWNWQTKNPQGFSA 349
>TIGR_CMR|GSU_2240 [details] [associations]
symbol:GSU_2240 "UDP-glucose 4-epimerase" species:243231
"Geobacter sulfurreducens PCA" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:P09147 RefSeq:NP_953289.1 ProteinModelPortal:Q74AW0
GeneID:2687202 KEGG:gsu:GSU2240 PATRIC:22027335 OMA:VEHARQG
ProtClustDB:CLSK828777 BioCyc:GSUL243231:GH27-2212-MONOMER
Uniprot:Q74AW0
Length = 326
Score = 587 (211.7 bits), Expect = 4.6e-57, P = 4.6e-57
Identities = 138/336 (41%), Positives = 184/336 (54%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
VLVTGGAGYIGSH +L + Y V + DNLS G A+ V E RL + DL
Sbjct: 3 VLVTGGAGYIGSHVVRQLSEAGYTVVVYDNLSTGFPDAL-VHGE------RL--VTGDLS 53
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
D ++ F E F V+HFAA ES PLKYY N T NTL +L + +HGV+ I
Sbjct: 54 DTARLDALFVEYGFSTVLHFAASIIAPESVTAPLKYYGNNTRNTLNLLGACVKHGVERFI 113
Query: 193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIG 252
+SST A YG P+ EE+ PINPYG +K M+E ++ D M + LRYFNV G
Sbjct: 114 FSSTAAVYGIPDSGVAAEESATVPINPYGTSKLMSEWMLRDVCAAHGMRSVALRYFNVAG 173
Query: 253 SDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRDYIDVNDL 312
+DP+ R+G+ PE ++S C AA G+ + + GTDY T DGT +RDYI V DL
Sbjct: 174 ADPQARMGQRT-PEATHLIKVS--C-QAALGLRDKVCIFGTDYPTPDGTGIRDYIHVEDL 229
Query: 313 VDAHVKALERAQPKKVGI-YNVGTGKGRSVKEFVEACKKATSANIKVIYEPRRPGDYAEV 371
AH+ AL + NVG G G SV+E ++ ++ + + PRRPGD +
Sbjct: 230 ASAHLAALSYLEKGGESTRINVGYGSGSSVREVIDMVRRVSGVHFLAEEAPRRPGDPPSL 289
Query: 372 YSDPTKIRLELNWTAKYTNLQESLEIAWRWQKSHRG 407
+ + R L WT +Y NL+ + AWRW+K G
Sbjct: 290 VARADRARTLLGWTPRYDNLETIVADAWRWEKKISG 325
>UNIPROTKB|P09147 [details] [associations]
symbol:galE species:83333 "Escherichia coli K-12"
[GO:0006012 "galactose metabolic process" evidence=IDA;IMP]
[GO:0005975 "carbohydrate metabolic process" evidence=IMP]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0042802 "identical protein binding"
evidence=IPI] [GO:0070403 "NAD+ binding" evidence=IDA] [GO:0033499
"galactose catabolic process via UDP-galactose" evidence=IMP]
[GO:0005829 "cytosol" evidence=IDA] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=IEA;IDA] [GO:0009242 "colanic acid
biosynthetic process" evidence=IEP;IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 UniPathway:UPA00214
InterPro:IPR016040 GO:GO:0005829 Gene3D:3.40.50.720 GO:GO:0070403
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR eggNOG:COG1087 HOGENOM:HOG000168001
GO:GO:0003978 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 GO:GO:0009242
GO:GO:0033499 EMBL:X06226 OMA:THAPIDA EMBL:X51449 EMBL:U07867
EMBL:J01613 PIR:S02089 RefSeq:NP_415280.3 RefSeq:YP_489032.1
PDB:1A9Y PDB:1A9Z PDB:1KVQ PDB:1KVR PDB:1KVS PDB:1KVT PDB:1KVU
PDB:1LRJ PDB:1LRK PDB:1LRL PDB:1NAH PDB:1NAI PDB:1UDA PDB:1UDB
PDB:1UDC PDB:1XEL PDB:2UDP PDBsum:1A9Y PDBsum:1A9Z PDBsum:1KVQ
PDBsum:1KVR PDBsum:1KVS PDBsum:1KVT PDBsum:1KVU PDBsum:1LRJ
PDBsum:1LRK PDBsum:1LRL PDBsum:1NAH PDBsum:1NAI PDBsum:1UDA
PDBsum:1UDB PDBsum:1UDC PDBsum:1XEL PDBsum:2UDP
ProteinModelPortal:P09147 SMR:P09147 DIP:DIP-9728N IntAct:P09147
SWISS-2DPAGE:P09147 PRIDE:P09147 EnsemblBacteria:EBESCT00000004431
EnsemblBacteria:EBESCT00000004432 EnsemblBacteria:EBESCT00000004433
EnsemblBacteria:EBESCT00000014770 GeneID:12932906 GeneID:945354
KEGG:ecj:Y75_p0732 KEGG:eco:b0759 PATRIC:32116719 EchoBASE:EB0357
EcoGene:EG10362 ProtClustDB:PRK10675
BioCyc:EcoCyc:UDPGLUCEPIM-MONOMER BioCyc:ECOL316407:JW0742-MONOMER
BioCyc:MetaCyc:UDPGLUCEPIM-MONOMER SABIO-RK:P09147
EvolutionaryTrace:P09147 Genevestigator:P09147 Uniprot:P09147
Length = 338
Score = 585 (211.0 bits), Expect = 7.5e-57, P = 7.5e-57
Identities = 131/340 (38%), Positives = 182/340 (53%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
VLVTGG+GYIGSH ++LL++ + V I+DNL + V++ L + F+ D+
Sbjct: 3 VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGK--HPTFVEGDIR 60
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
+ + + ++A D V+HFA + VGES PL+YY N + TL ++ +M V I
Sbjct: 61 NEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFI 120
Query: 193 YSSTCATYGEPEKMPITEETPQA-PINPYGKAKKMAEDIILDFSK-NSDMAVMILRYFNV 250
+SS+ YG+ K+P E P P +PYGK+K M E I+ D K D ++ +LRYFN
Sbjct: 121 FSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNP 180
Query: 251 IGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRDYIDVN 310
+G+ P G +GE P+ + A G L + G DY T DGT VRDYI V
Sbjct: 181 VGAHPSGDMGEDPQGI---PNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVM 237
Query: 311 DLVDAHVKALERAQPKK-VGIYNVGTGKGRSVKEFVEACKKATSANIKVIYEPRRPGDYA 369
DL D HV A+E+ K V IYN+G G G SV + V A KA + + PRR GD
Sbjct: 238 DLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPRREGDLP 297
Query: 370 EVYSDPTKIRLELNWTAKYTNLQESLEIAWRWQKSHRGGY 409
++D +K ELNW T L E + W WQ H GY
Sbjct: 298 AYWADASKADRELNWRVTRT-LDEMAQDTWHWQSRHPQGY 336
>UNIPROTKB|Q4QRB0 [details] [associations]
symbol:Gale "Gale protein" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 RGD:621493 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 HOGENOM:HOG000168001 GO:GO:0003978
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 GO:GO:0019388 KO:K01784 EMBL:CH473968
GeneTree:ENSGT00530000063128 CTD:2582 HOVERGEN:HBG001396
UniGene:Rn.29908 EMBL:BC097293 IPI:IPI00882523 RefSeq:NP_542961.2
SMR:Q4QRB0 STRING:Q4QRB0 Ensembl:ENSRNOT00000013322 GeneID:114860
KEGG:rno:114860 InParanoid:Q4QRB0 NextBio:618919
Genevestigator:Q4QRB0 Uniprot:Q4QRB0
Length = 348
Score = 583 (210.3 bits), Expect = 1.2e-56, P = 1.2e-56
Identities = 141/349 (40%), Positives = 194/349 (55%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS---RGNIGAVKVLQELFPEPGR-LQFIY 128
VLVTGGAGYIGSH L LL+ Y ++DN RG + L+ + GR ++F
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYSPVVIDNFHNSIRGEDSMPESLRRVQELTGRSVEFEE 64
Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH-NITSNTLVVLESMARHG 187
D+ D A+ F ++ F AV+HFA + VGES PL YY N+T T+ +LE M HG
Sbjct: 65 MDILDQAALQHLFKKHNFKAVIHFAGLKAVGESVQKPLDYYRVNLTG-TIQLLEIMRAHG 123
Query: 188 VDTLIYSSTCATYGEPEKMPITEETPQAPI-NPYGKAKKMAEDIILDFSKNSDMA--VMI 244
V +L++SS+ YG P+ +P+ E P NPYGK+K E++I D + +D A ++
Sbjct: 124 VKSLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIQDLCR-ADTAWNAVL 182
Query: 245 LRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVR 304
LRYFN IG+ GR+GE P+ + A G L V G DY+T DGT VR
Sbjct: 183 LRYFNPIGAHASGRIGEDPQGI---PNNLMPYVSQVAIGRREALNVFGDDYATEDGTGVR 239
Query: 305 DYIDVNDLVDAHVKALERAQPKKVG--IYNVGTGKGRSVKEFVEACKKATSANIKVIYEP 362
DYI V DL H+ AL++ + ++ G IYN+GTG G SV + V+A +KA+ I
Sbjct: 240 DYIHVVDLAKGHIAALKKLK-EQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVA 298
Query: 363 RRPGDYAEVYSDPTKIRLELNWTAKYTNLQESLEIAWRWQKSHRGGYAS 411
RR GD A Y++P+ EL WTA L E WRWQK + G+ +
Sbjct: 299 RREGDVAACYANPSLAHEELGWTAAL-GLDRMCEDLWRWQKQNPSGFGA 346
>TIGR_CMR|BA_5505 [details] [associations]
symbol:BA_5505 "UDP-glucose 4-epimerase" species:198094
"Bacillus anthracis str. Ames" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0046872 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0044237 HOGENOM:HOG000168001
OMA:SHPNGYN GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
RefSeq:NP_847665.1 RefSeq:YP_022172.1 RefSeq:YP_031353.1 PDB:2C20
PDBsum:2C20 ProteinModelPortal:Q81K34 SMR:Q81K34 DNASU:1085150
EnsemblBacteria:EBBACT00000011015 EnsemblBacteria:EBBACT00000018769
EnsemblBacteria:EBBACT00000021224 GeneID:1085150 GeneID:2819098
GeneID:2850681 KEGG:ban:BA_5505 KEGG:bar:GBAA_5505 KEGG:bat:BAS5114
ProtClustDB:CLSK917664 BioCyc:BANT260799:GJAJ-5189-MONOMER
BioCyc:BANT261594:GJ7F-5367-MONOMER EvolutionaryTrace:Q81K34
Uniprot:Q81K34
Length = 330
Score = 582 (209.9 bits), Expect = 1.6e-56, P = 1.6e-56
Identities = 135/338 (39%), Positives = 184/338 (54%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
+L+ GGAGYIGSHA +L+ + V +VDNL G+ A+ G +F DL
Sbjct: 4 ILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAIT--------EGA-KFYNGDLR 54
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
D + F++ +AVMHFAA + VG S PL+YY+N L +LE M VD I
Sbjct: 55 DKAFLRDVFTQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFI 114
Query: 193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIG 252
+SST ATYGE + ITEET P N YG+ K E ++ +S+ S++ I RYFNV G
Sbjct: 115 FSSTAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLHWYSQASNLRYKIFRYFNVAG 174
Query: 253 SDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRDYIDVNDL 312
+ P G +GE RPE H + A G + + G DY+T DGTC+RDYI V DL
Sbjct: 175 ATPNGIIGEDHRPET--H--LIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDL 230
Query: 313 VDAHVKALERAQPK-KVGIYNVGTGKGRSVKEFVEACKKATSANIKVIYEPRRPGDYAEV 371
V AH L+ Q + YN+G G G SVKE V+A ++ T+ I PRR GD A +
Sbjct: 231 VAAHFLGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREVTNHEIPAEVAPRRAGDPARL 290
Query: 372 YSDPTKIRLELNWTAKYTNLQESLEIAWRWQKSHRGGY 409
+ K + +L W +Y N++ +E AW W + GY
Sbjct: 291 VASSQKAKEKLGWDPRYVNVKTIIEHAWNWHQKQPNGY 328
>UNIPROTKB|F1PI88 [details] [associations]
symbol:GALE "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019388 "galactose catabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
GO:GO:0019388 KO:K01784 GeneTree:ENSGT00530000063128 OMA:ADKAWNA
EMBL:AAEX03001747 RefSeq:XP_003638951.1 ProteinModelPortal:F1PI88
Ensembl:ENSCAFT00000020920 GeneID:100855555 KEGG:cfa:100855555
Uniprot:F1PI88
Length = 348
Score = 580 (209.2 bits), Expect = 2.5e-56, P = 2.5e-56
Identities = 142/347 (40%), Positives = 191/347 (55%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS---RGNIGAVKVLQELFPEPGR-LQFIY 128
VLVTGGAGYIGSH L LL+ Y ++DN RG + LQ + GR ++F
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYSPVVIDNFHNAIRGKGSMPESLQRVQELTGRSVEFEE 64
Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH-NITSNTLVVLESMARHG 187
D+ D A+ + F +++F AV+HFA + VGES PL YY N+T + + +LE M HG
Sbjct: 65 MDILDQAALQRLFEKHSFTAVIHFAGLKAVGESVQKPLDYYRVNLTGS-IQLLEIMRAHG 123
Query: 188 VDTLIYSSTCATYGEPEKMPITEETPQAPI-NPYGKAKKMAEDIILDFSKNSDMA--VMI 244
V L++SS+ YG P+ +P+ E P NPYGK+K E++I D + +D A ++
Sbjct: 124 VKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKYFIEEMIRDLCQ-ADKAWNAVL 182
Query: 245 LRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVR 304
LRYFN IG+ G +GE P+ + A G L V G DY T DGT VR
Sbjct: 183 LRYFNPIGAHASGCIGEDPQGI---PNNLMPYVSQVAIGRREVLNVFGNDYDTEDGTGVR 239
Query: 305 DYIDVNDLVDAHVKALERAQPKKVG--IYNVGTGKGRSVKEFVEACKKATSANIKVIYEP 362
DYI V DL H+ AL + + ++ G IYN+GTG G SV + VEA KKA+ I
Sbjct: 240 DYIHVVDLAKGHIAALRKLK-EQCGCRIYNLGTGTGYSVLQMVEAMKKASGQEIPYKVVA 298
Query: 363 RRPGDYAEVYSDPTKIRLELNWTAKYTNLQESLEIAWRWQKSHRGGY 409
RR GD A Y++P+ EL WTA L E WRWQK + G+
Sbjct: 299 RREGDVAACYANPSLALKELGWTA-VLGLDRMCEDLWRWQKQNPSGF 344
>MGI|MGI:1921496 [details] [associations]
symbol:Gale "galactose-4-epimerase, UDP" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=ISO;IDA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005975 "carbohydrate
metabolic process" evidence=IEA] [GO:0006012 "galactose metabolic
process" evidence=IDA] [GO:0016853 "isomerase activity"
evidence=IEA] [GO:0016857 "racemase and epimerase activity, acting
on carbohydrates and derivatives" evidence=IEA] [GO:0019388
"galactose catabolic process" evidence=ISO] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214
InterPro:IPR016040 MGI:MGI:1921496 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087 HOGENOM:HOG000168001
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
GO:GO:0019388 KO:K01784 GeneTree:ENSGT00530000063128 OMA:ADKAWNA
CTD:2582 HOVERGEN:HBG001396 OrthoDB:EOG4B5P5D EMBL:BC027438
IPI:IPI00153129 RefSeq:NP_848476.1 UniGene:Mm.247946
ProteinModelPortal:Q8R059 SMR:Q8R059 STRING:Q8R059
PhosphoSite:Q8R059 PaxDb:Q8R059 PRIDE:Q8R059
Ensembl:ENSMUST00000102540 Ensembl:ENSMUST00000102541 GeneID:74246
KEGG:mmu:74246 InParanoid:Q8R059 ChiTaRS:GALE NextBio:340230
Bgee:Q8R059 CleanEx:MM_GALE Genevestigator:Q8R059
GermOnline:ENSMUSG00000028671 Uniprot:Q8R059
Length = 347
Score = 580 (209.2 bits), Expect = 2.5e-56, P = 2.5e-56
Identities = 140/349 (40%), Positives = 193/349 (55%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS---RGNIGAVKVLQELFPEPGR-LQFIY 128
VLVTGGAGYIGSH L LL+ Y ++DN RG + L+ + GR ++F
Sbjct: 4 VLVTGGAGYIGSHTVLELLEAGYSPVVIDNFHNAIRGEDSMPESLRRVQELTGRSVEFEE 63
Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH-NITSNTLVVLESMARHG 187
D+ D A+ F +++F AV+HFA + VGES PL YY N+T T+ +LE M HG
Sbjct: 64 MDILDQAALQHLFKKHSFKAVIHFAGLKAVGESVQKPLDYYRVNLTG-TIQLLEIMRAHG 122
Query: 188 VDTLIYSSTCATYGEPEKMPITEETPQAPI-NPYGKAKKMAEDIILDFSKNSDMA--VMI 244
V L++SS+ YG P+ +P+ E P NPYGK+K E++I D + +D A ++
Sbjct: 123 VKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCR-ADTAWNAVL 181
Query: 245 LRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVR 304
LRYFN IG+ GR+GE P+ + A G L V G DY+T DGT VR
Sbjct: 182 LRYFNPIGAHASGRIGEDPQGI---PNNLMPYVSQVAIGRREALNVFGDDYATEDGTGVR 238
Query: 305 DYIDVNDLVDAHVKALERAQPKKVGI--YNVGTGKGRSVKEFVEACKKATSANIKVIYEP 362
DYI V DL H+ AL++ + ++ G YN+GTG G SV + V+A +KA+ I
Sbjct: 239 DYIHVVDLAKGHIAALKKLK-EQCGCRTYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVA 297
Query: 363 RRPGDYAEVYSDPTKIRLELNWTAKYTNLQESLEIAWRWQKSHRGGYAS 411
RR GD A Y++P+ EL WTA L E WRWQK + G+ +
Sbjct: 298 RREGDVAACYANPSLAHEELGWTAAL-GLDRMCEDLWRWQKQNPSGFGA 345
>ZFIN|ZDB-GENE-060421-6479 [details] [associations]
symbol:gale "UDP-galactose-4-epimerase"
species:7955 "Danio rerio" [GO:0016857 "racemase and epimerase
activity, acting on carbohydrates and derivatives" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0005975
"carbohydrate metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0006012 "galactose metabolic process"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016853 "isomerase activity" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 ZFIN:ZDB-GENE-060421-6479 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 GeneTree:ENSGT00530000063128
EMBL:CR391986 IPI:IPI00758807 Ensembl:ENSDART00000135569
ArrayExpress:F1Q5H4 Bgee:F1Q5H4 Uniprot:F1Q5H4
Length = 350
Score = 580 (209.2 bits), Expect = 2.5e-56, P = 2.5e-56
Identities = 136/348 (39%), Positives = 193/348 (55%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS---RGNIGAVKVLQ--ELFPEPGRLQFI 127
+LVTGG GYIGSH + L++ + ++DN S RG + L+ E F + +++F
Sbjct: 5 ILVTGGGGYIGSHCVVELIEAGFHPVVIDNFSNAVRGEGDVPESLRRIEKFMDT-QIEFH 63
Query: 128 YADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH-NITSNTLVVLESMARH 186
DL D + K F ++F AVMHFA + VGES PL+YY N+T T+ +LE M H
Sbjct: 64 ELDLLDKPGLEKIFKMHSFYAVMHFAGLKAVGESVEQPLRYYRVNLTG-TINLLEVMQSH 122
Query: 187 GVDTLIYSSTCATYGEPEKMPITEETPQAPI-NPYGKAKKMAEDIILD-FSKNSDMAVMI 244
GV L++SS+ YG+P+K+PI E+ P NPYGK K E++I D + D ++
Sbjct: 123 GVRNLVFSSSATVYGDPQKLPIDEQHPVGGCTNPYGKTKYFIEEMIRDQCTAEKDWNAVL 182
Query: 245 LRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVR 304
LRYFN IG+ G++GE P+ + A G L V G DYST DGT VR
Sbjct: 183 LRYFNPIGAHISGQIGEDPQGI---PNNLLPYVAQVAIGRRKHLNVFGNDYSTPDGTGVR 239
Query: 305 DYIDVNDLVDAHVKALERAQPK-KVGIYNVGTGKGRSVKEFVEACKKATSANIKVIYEPR 363
DYI V DL H+ A+ + + +YN+GTG G SV + V A +KA+ I PR
Sbjct: 240 DYIHVVDLAKGHIAAVRKLKDSCGCKVYNLGTGTGYSVLQMVSAMEKASGRKIAYQIAPR 299
Query: 364 RPGDYAEVYSDPTKIRLELNWTAKYTNLQESLEIAWRWQKSHRGGYAS 411
R GD A Y+D + EL W A++ +L+ E WRWQ + G+++
Sbjct: 300 RSGDVASCYADASLAEKELGWKAEF-DLERMCEDLWRWQSQNPTGFSN 346
>UNIPROTKB|Q6A1A4 [details] [associations]
symbol:galE "UDP-galactose 4-epimerase" species:644
"Aeromonas hydrophila" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IDA] [GO:0006012 "galactose metabolic process"
evidence=IC] [GO:0042803 "protein homodimerization activity"
evidence=IDA] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:AJ785765 ProteinModelPortal:Q6A1A4 SMR:Q6A1A4 Uniprot:Q6A1A4
Length = 338
Score = 575 (207.5 bits), Expect = 8.6e-56, P = 8.6e-56
Identities = 128/340 (37%), Positives = 181/340 (53%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
VLVTGG+GYIGSH ++LL+ + V I+DNL + V++ L + + F+ D+
Sbjct: 3 VLVTGGSGYIGSHTCVQLLQSGHDVVILDNLCNSKRSVLPVIERLSGK--QPTFVEGDIR 60
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
+ + + ++A + V+HFA + VGES PL+YY N + TL ++ +M V I
Sbjct: 61 NEALMTEILHDHAIETVIHFAGLKAVGESVAKPLEYYDNNVNGTLRLISAMRAANVKNFI 120
Query: 193 YSSTCATYGEPEKMPITEETPQA-PINPYGKAKKMAEDIILDFSK-NSDMAVMILRYFNV 250
+SS+ YG+ K+P E P P +PYGK+K M E I+ D K + ++ +LRYFN
Sbjct: 121 FSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPEWSIALLRYFNP 180
Query: 251 IGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRDYIDVN 310
+G+ P G +GE P+ + A G L + G DY D T VRDYI V
Sbjct: 181 VGAHPSGDMGEDPQGI---PNNLIPYIAQVAVGRRDSLAIFGNDYPPEDATAVRDYIHVM 237
Query: 311 DLVDAHVKALERAQPKK-VGIYNVGTGKGRSVKEFVEACKKATSANIKVIYEPRRPGDYA 369
DL D HV A+++ K V IYN+G G G SV + V A KA +K + PRR GD
Sbjct: 238 DLADGHVAAMQQLADKPGVHIYNLGAGIGSSVLDVVNAFSKACGKPVKYHFAPRRDGDLP 297
Query: 370 EVYSDPTKIRLELNWTAKYTNLQESLEIAWRWQKSHRGGY 409
++D TK ELNW T L E + W WQ H GY
Sbjct: 298 AYWADATKADKELNWRVTRT-LDEMAQDTWHWQSRHPQGY 336
>UNIPROTKB|F1NWE5 [details] [associations]
symbol:GALE "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IEA] [GO:0019388 "galactose catabolic process"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GO:GO:0003978 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 GO:GO:0019388
GeneTree:ENSGT00530000063128 OMA:ADKAWNA EMBL:AADN02043722
EMBL:AADN02043721 IPI:IPI00604262 Ensembl:ENSGALT00000006441
Uniprot:F1NWE5
Length = 351
Score = 571 (206.1 bits), Expect = 2.3e-55, P = 2.3e-55
Identities = 138/350 (39%), Positives = 195/350 (55%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNL---SRGNIGAV----KVLQELFPEPGRLQ 125
+LVTGGAGYIGSH L+L + Y ++DNL +RG GA+ + +Q + P +
Sbjct: 9 ILVTGGAGYIGSHCVLQLAEAGYEPVVIDNLRNAARGP-GALPESLQRVQRIAQTP--IA 65
Query: 126 FIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH-NITSNTLVVLESMA 184
F D+ D A+ K FS + F VMHFA + VGES PL+YY+ N+T T+ +LE+M
Sbjct: 66 FQELDITDGAALRKLFSTHRFSGVMHFAGLKAVGESVRRPLEYYNVNLTG-TIRLLEAME 124
Query: 185 RHGVDTLIYSSTCATYGEPEKMPITEETPQAPI-NPYGKAKKMAEDIILDFSK-NSDMAV 242
+ V +++SS+ YG+P+ +P+ E+ P NPYGK+K E++I D K
Sbjct: 125 AYSVRNIVFSSSATVYGDPQYLPLDEKHPVGGCTNPYGKSKYFIEEMIQDLCKAEKGWNA 184
Query: 243 MILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTC 302
++LRYFN IG+ G +GE P+ + A G L V G DY TADGT
Sbjct: 185 ILLRYFNPIGAHESGMIGEDPQGI---PNNLMPYVAQVAVGRQEFLSVFGNDYETADGTG 241
Query: 303 VRDYIDVNDLVDAHVKALERAQPKKVG--IYNVGTGKGRSVKEFVEACKKATSANIKVIY 360
+RDYI V DL H+ AL++ + + G IYN+GTG G SV + V+A +KA+ IK
Sbjct: 242 IRDYIHVVDLAKGHIAALKKLK-ENCGCKIYNLGTGTGYSVLQMVQAMEKASGREIKYKI 300
Query: 361 EPRRPGDYAEVYSDPTKIRLELNWTAKYTNLQESLEIAWRWQKSHRGGYA 410
RR GD A Y++P EL W A + L + E WRWQ + GY+
Sbjct: 301 TGRREGDVAACYANPELAERELGWKAAF-GLDKMCEDLWRWQLQNPTGYS 349
>UNIPROTKB|I3LL84 [details] [associations]
symbol:GALE "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019388 "galactose catabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
GO:GO:0019388 KO:K01784 GeneTree:ENSGT00530000063128 OMA:ADKAWNA
CTD:2582 EMBL:FP475977 RefSeq:XP_003356250.1
Ensembl:ENSSSCT00000028713 GeneID:100621392 KEGG:ssc:100621392
Uniprot:I3LL84
Length = 348
Score = 568 (205.0 bits), Expect = 4.8e-55, P = 4.8e-55
Identities = 140/349 (40%), Positives = 189/349 (54%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS---RGNIGAVKVLQELFPEPGR-LQFIY 128
VLVTGGAGYIGSH L LL+ Y ++DN RG + L+ + GR ++F
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYSPVVIDNFHNAIRGGSSMPESLRRVQELTGRSVEFEE 64
Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH-NITSNTLVVLESMARHG 187
D+ D A+ + F + F AV+HFA + VGES PL YY N+T T+ +LE M HG
Sbjct: 65 MDILDQAALQRLFKKYHFVAVIHFAGLKAVGESVQKPLDYYRVNLTG-TIQLLEIMKAHG 123
Query: 188 VDTLIYSSTCATYGEPEKMPITEETPQAPI-NPYGKAKKMAEDIILDFSKNSDMA--VMI 244
V L++SS+ YG P+ +P+ E P NPYGK+K E++I D + +D A ++
Sbjct: 124 VKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQ-ADKAWNAVL 182
Query: 245 LRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVR 304
LRYFN IG+ G +GE P+ + A G L V G DY T DGT VR
Sbjct: 183 LRYFNPIGAHASGCIGEDPQGI---PNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVR 239
Query: 305 DYIDVNDLVDAHVKALERAQPKKVG--IYNVGTGKGRSVKEFVEACKKATSANIKVIYEP 362
DYI V DL H+ AL + + ++ G IYN+GTG G SV + V A +KA+ I
Sbjct: 240 DYIHVVDLAKGHIAALRKLK-EQCGCRIYNLGTGTGYSVLQMVRAMEKASGKKIPYKVVA 298
Query: 363 RRPGDYAEVYSDPTKIRLELNWTAKYTNLQESLEIAWRWQKSHRGGYAS 411
RR GD A Y++P+ EL WTA L E WRWQK + G+ +
Sbjct: 299 RREGDVAACYANPSLALKELGWTAAL-GLDRMCEDLWRWQKQNPSGFGA 346
>UNIPROTKB|Q3T105 [details] [associations]
symbol:GALE "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019388 "galactose catabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 GO:GO:0019388 KO:K01784
GeneTree:ENSGT00530000063128 OMA:ADKAWNA CTD:2582
HOVERGEN:HBG001396 OrthoDB:EOG4B5P5D EMBL:DAAA02006426
EMBL:BC102185 IPI:IPI00686007 RefSeq:NP_001193137.1
UniGene:Bt.12474 SMR:Q3T105 STRING:Q3T105
Ensembl:ENSBTAT00000006586 GeneID:523154 KEGG:bta:523154
InParanoid:Q3T105 NextBio:20873677 Uniprot:Q3T105
Length = 348
Score = 566 (204.3 bits), Expect = 7.8e-55, P = 7.8e-55
Identities = 139/349 (39%), Positives = 192/349 (55%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS---RGNIGAVKVLQELFPEPGR-LQFIY 128
VLVTGGAGYIGSH L LL+ Y ++DN RG + L+ + GR ++F
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYSPMVIDNFHNAIRGGGSMPESLRRVQDLTGRSVEFEE 64
Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH-NITSNTLVVLESMARHG 187
D+ D A+ + F +++F AV+HFA + VGES PL YY N+T T+ +LE M HG
Sbjct: 65 MDILDQAALQRLFKKHSFMAVIHFAGLKAVGESVQKPLDYYRVNLTG-TIQLLEIMRAHG 123
Query: 188 VDTLIYSSTCATYGEPEKMPITEETPQAPI-NPYGKAKKMAEDIILDFSKNSDMA--VMI 244
V L++SS+ YG P+ +P+ E P NPYGK+K E++I D + +D A ++
Sbjct: 124 VKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQ-ADKAWNAVL 182
Query: 245 LRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVR 304
LRYFN IG+ G +GE P+ + A G L V G DY T DGT VR
Sbjct: 183 LRYFNPIGAHASGCIGEDPQGI---PNNLMPYVSQVAIGRREVLNVFGNDYDTEDGTGVR 239
Query: 305 DYIDVNDLVDAHVKALERAQPKKVG--IYNVGTGKGRSVKEFVEACKKATSANIKVIYEP 362
DYI V DL H+ AL + + ++ G IYN+GTG G SV + V+A +KA+ I
Sbjct: 240 DYIHVVDLAKGHIAALRKLK-EQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVA 298
Query: 363 RRPGDYAEVYSDPTKIRLELNWTAKYTNLQESLEIAWRWQKSHRGGYAS 411
RR GD A Y++P+ EL W+A L E WRWQK + G+ +
Sbjct: 299 RREGDVAACYANPSLALKELGWSAAL-GLDRMCEDLWRWQKQNPSGFGT 346
>UNIPROTKB|Q14376 [details] [associations]
symbol:GALE "UDP-glucose 4-epimerase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=EXP;IDA] [GO:0019388 "galactose catabolic
process" evidence=IDA;TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0005975 "carbohydrate metabolic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
Reactome:REACT_111217 InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214
InterPro:IPR016040 GO:GO:0005829 GO:GO:0000166 GO:GO:0044281
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
GO:GO:0019388 KO:K01784 EMBL:AL031295 OMA:ADKAWNA CTD:2582
EMBL:L41668 EMBL:AF022382 EMBL:BC001273 EMBL:BC050685
IPI:IPI00553131 RefSeq:NP_000394.2 RefSeq:NP_001008217.1
RefSeq:NP_001121093.1 UniGene:Hs.632380 PDB:1EK5 PDB:1EK6 PDB:1HZJ
PDB:1I3K PDB:1I3L PDB:1I3M PDB:1I3N PDBsum:1EK5 PDBsum:1EK6
PDBsum:1HZJ PDBsum:1I3K PDBsum:1I3L PDBsum:1I3M PDBsum:1I3N
ProteinModelPortal:Q14376 SMR:Q14376 IntAct:Q14376 STRING:Q14376
PhosphoSite:Q14376 DMDM:68056598 PaxDb:Q14376 PRIDE:Q14376
DNASU:2582 Ensembl:ENST00000374497 GeneID:2582 KEGG:hsa:2582
UCSC:uc001bhv.1 GeneCards:GC01M024122 HGNC:HGNC:4116 HPA:HPA007340
MIM:230350 MIM:606953 neXtProt:NX_Q14376 Orphanet:79238
PharmGKB:PA28531 HOVERGEN:HBG001396 InParanoid:Q14376
OrthoDB:EOG4B5P5D PhylomeDB:Q14376 BioCyc:MetaCyc:HS04117-MONOMER
SABIO-RK:Q14376 BindingDB:Q14376 ChEMBL:CHEMBL5843
EvolutionaryTrace:Q14376 GenomeRNAi:2582 NextBio:10213
ArrayExpress:Q14376 Bgee:Q14376 CleanEx:HS_GALE
Genevestigator:Q14376 GermOnline:ENSG00000117308 Uniprot:Q14376
Length = 348
Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
Identities = 137/348 (39%), Positives = 189/348 (54%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS---RGNIGAVKVLQELFPEPGR-LQFIY 128
VLVTGGAGYIGSH L LL+ Y ++DN RG + L+ + GR ++F
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEE 64
Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH-NITSNTLVVLESMARHG 187
D+ D A+ + F + +F AV+HFA + VGES PL YY N+T T+ +LE M HG
Sbjct: 65 MDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTG-TIQLLEIMKAHG 123
Query: 188 VDTLIYSSTCATYGEPEKMPITEETPQAPI-NPYGKAKKMAEDIILDFSK-NSDMAVMIL 245
V L++SS+ YG P+ +P+ E P NPYGK+K E++I D + + ++L
Sbjct: 124 VKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLL 183
Query: 246 RYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRD 305
RYFN G+ G +GE P+ + A G L V G DY T DGT VRD
Sbjct: 184 RYFNPTGAHASGCIGEDPQGI---PNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRD 240
Query: 306 YIDVNDLVDAHVKALERAQPKKVG--IYNVGTGKGRSVKEFVEACKKATSANIKVIYEPR 363
YI V DL H+ AL + + ++ G IYN+GTG G SV + V+A +KA+ I R
Sbjct: 241 YIHVVDLAKGHIAALRKLK-EQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVAR 299
Query: 364 RPGDYAEVYSDPTKIRLELNWTAKYTNLQESLEIAWRWQKSHRGGYAS 411
R GD A Y++P+ + EL WTA L E WRWQK + G+ +
Sbjct: 300 REGDVAACYANPSLAQEELGWTAAL-GLDRMCEDLWRWQKQNPSGFGT 346
>POMBASE|SPBC365.14c [details] [associations]
symbol:uge1 "UDP-glucose 4-epimerase Uge1" species:4896
"Schizosaccharomyces pombe" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IDA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0033499 "galactose catabolic process via
UDP-galactose" evidence=ISS] [GO:0042125 "protein galactosylation"
evidence=IMP] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
UniPathway:UPA00214 InterPro:IPR016040 PomBase:SPBC365.14c
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CU329671
eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 KO:K01784 HSSP:P04397 OrthoDB:EOG4NKG3T
GO:GO:0033499 GO:GO:0042125 OMA:ADKAWNA PIR:T40321
RefSeq:NP_596043.1 ProteinModelPortal:Q9Y7X5 SMR:Q9Y7X5
STRING:Q9Y7X5 PRIDE:Q9Y7X5 EnsemblFungi:SPBC365.14c.1
GeneID:2540938 KEGG:spo:SPBC365.14c NextBio:20802053 Uniprot:Q9Y7X5
Length = 355
Score = 557 (201.1 bits), Expect = 7.0e-54, P = 7.0e-54
Identities = 131/344 (38%), Positives = 188/344 (54%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
VLVTGGAGYIGSH + LL+ Y V IVDNL + AV +++L + ++ F DL
Sbjct: 9 VLVTGGAGYIGSHTCVVLLEKGYDVVIVDNLCNSRVEAVHRIEKLTGK--KVIFHQVDLL 66
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
D A++K F+ AV+HFA + VGES PL YY N S T+ ++E M ++ V +
Sbjct: 67 DEPALDKVFANQNISAVIHFAGLKAVGESVQVPLSYYKNNISGTINLIECMKKYNVRDFV 126
Query: 193 YSSTCATYGEPEK----MPITEETPQAPINPYGKAKKMAEDIILDFSK-NSDMAVMILRY 247
+SS+ YG+P + +PI E P+ +PYG+ K E+II D +K N + +LRY
Sbjct: 127 FSSSATVYGDPTRPGGTIPIPESCPREGTSPYGRTKLFIENIIEDETKVNKSLNAALLRY 186
Query: 248 FNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRDYI 307
FN G+ P G LGE P L + A G + L V G DY T+DGT +RDYI
Sbjct: 187 FNPGGAHPSGELGEDP---LGIPNNLLPYIAQVAVGRLDHLNVFGDDYPTSDGTPIRDYI 243
Query: 308 DVNDLVDAHVKALERAQPKKVGI--YNVGTGKGRSVKEFVEACKKATSANIKVIYEPRRP 365
V DL +AHV AL+ + V +N+G+G G +V + + A KA ++ PRR
Sbjct: 244 HVCDLAEAHVAALDYLRQHFVSCRPWNLGSGTGSTVFQVLNAFSKAVGRDLPYKVTPRRA 303
Query: 366 GDYAEVYSDPTKIRLELNWTAKYTNLQESLEIAWRWQKSHRGGY 409
GD + ++PT+ EL W ++ E WRWQ+ + G+
Sbjct: 304 GDVVNLTANPTRANEELKWKTS-RSIYEICVDTWRWQQKYPYGF 346
>TIGR_CMR|CPS_2147 [details] [associations]
symbol:CPS_2147 "UDP-glucose 4-epimerase" species:167879
"Colwellia psychrerythraea 34H" [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=ISS] [GO:0006012 "galactose
metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
RefSeq:YP_268872.1 ProteinModelPortal:Q482Z5 SMR:Q482Z5
STRING:Q482Z5 GeneID:3518989 KEGG:cps:CPS_2147 PATRIC:21467411
OMA:QTAMGIR BioCyc:CPSY167879:GI48-2217-MONOMER Uniprot:Q482Z5
Length = 340
Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
Identities = 131/346 (37%), Positives = 185/346 (53%)
Query: 73 VLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELFPEPGR-LQFIYA 129
+L+TGG GYIGSH + LL+ + + IVDNLS + KVL+ + + + FI A
Sbjct: 3 LLITGGTGYIGSHTVVELLQSTKEQEIVIVDNLSNSS---TKVLERIKQITNKTVTFIKA 59
Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD 189
D+ D A+ + F+E+ +AV+HFA + VGES PL YY N S T+ +L MA++ V
Sbjct: 60 DVCDENALEQVFNEHKIEAVIHFAGLKAVGESNEIPLAYYQNNVSGTITLLRVMAKYQVK 119
Query: 190 TLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN-SDMAVMILRYF 248
L++SS+ YG P+ E + NPYG+ K M E ++ D +K+ + ++ LRYF
Sbjct: 120 NLVFSSSATVYGN-NVSPLNETMATSATNPYGQTKLMVEHVLFDLAKSDASWSIACLRYF 178
Query: 249 NVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRDYID 308
N IG+ G +GE P + A G + L++ G DY T DGT VRDYI
Sbjct: 179 NPIGAHQSGLIGENPNGI---PNNLLPYVAQVAVGRLEQLQIFGDDYDTQDGTGVRDYIH 235
Query: 309 VNDLVDAHVKALE-----RAQPKKVGIYNVGTGKGRSVKEFVEACKKATSANIKVIYEPR 363
V DL HVKALE + K N+GTG G SV E V K + +I PR
Sbjct: 236 VVDLAQGHVKALESLGHAKGTVKGCQAINLGTGNGTSVLEIVNTFKDISKQDIPYQVVPR 295
Query: 364 RPGDYAEVYSDPTKIRLELNWTAKYTNLQESLEIAWRWQKSHRGGY 409
R GD A VY+D + L+W AK +L ++ WRWQ + G+
Sbjct: 296 RAGDLATVYADASLANELLDWQAKL-DLTAMIQDTWRWQSENPNGF 340
>SGD|S000000223 [details] [associations]
symbol:GAL10 "UDP-glucose-4-epimerase" species:4932
"Saccharomyces cerevisiae" [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0004034 "aldose 1-epimerase activity"
evidence=IEA;IDA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0016853
"isomerase activity" evidence=IEA] [GO:0006012 "galactose metabolic
process" evidence=IEA] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IMP;IDA] [GO:0033499 "galactose catabolic process via
UDP-galactose" evidence=IMP;IDA] [GO:0019318 "hexose metabolic
process" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008152 "metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0030246 "carbohydrate binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008183 InterPro:IPR011013 InterPro:IPR014718
Pfam:PF01263 Pfam:PF01370 UniPathway:UPA00214 UniPathway:UPA00242
InterPro:IPR016040 SGD:S000000223 GO:GO:0005829 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0030246 EMBL:BK006936
GO:GO:0044237 SUPFAM:SSF74650 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
Gene3D:2.70.98.10 eggNOG:COG2017 HOGENOM:HOG000247896 KO:K15917
OMA:CKDLWKW OrthoDB:EOG4NKG3T GO:GO:0004034 GO:GO:0033499
InterPro:IPR018052 PROSITE:PS00545 EMBL:Z35888 EMBL:X81324
EMBL:K02115 EMBL:M12348 EMBL:K01609 PIR:S45875 RefSeq:NP_009575.1
PDB:1Z45 PDBsum:1Z45 ProteinModelPortal:P04397 SMR:P04397
DIP:DIP-4891N MINT:MINT-526001 STRING:P04397 PeptideAtlas:P04397
PRIDE:P04397 EnsemblFungi:YBR019C GeneID:852307 KEGG:sce:YBR019C
CYGD:YBR019c GeneTree:ENSGT00530000063128 EvolutionaryTrace:P04397
NextBio:970981 Genevestigator:P04397 GermOnline:YBR019C
Uniprot:P04397
Length = 699
Score = 549 (198.3 bits), Expect = 4.9e-53, P = 4.9e-53
Identities = 134/357 (37%), Positives = 186/357 (52%)
Query: 65 QHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRL 124
Q E VLVTGGAGYIGSH + L+++ Y + DNLS +V L+ L +
Sbjct: 6 QSESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKH--HI 63
Query: 125 QFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMA 184
F DL D K + K F E D+V+HFA + VGEST PL+YYHN T+V+LE M
Sbjct: 64 PFYEVDLCDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQ 123
Query: 185 RHGVDTLIYSSTCATYGE----PEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
++ V ++SS+ YG+ P +PI EE P P NPYG K E+I+ D NSD
Sbjct: 124 QYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLY-NSDK 182
Query: 241 A---VMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYST 297
ILRYFN IG+ P G +GE P L + A G L + G DY +
Sbjct: 183 KSWKFAILRYFNPIGAHPSGLIGEDP---LGIPNNLLPYMAQVAVGRREKLYIFGDDYDS 239
Query: 298 ADGTCVRDYIDVNDLVDAHVKALE--RAQPKKVGI---YNVGTGKGRSVKEFVEACKKAT 352
DGT +RDYI V DL H+ AL+ A + G+ +N+G+GKG +V E A KA+
Sbjct: 240 RDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKAS 299
Query: 353 SANIKVIYEPRRPGDYAEVYSDPTKIRLELNWTAKYTNLQESLEIAWRWQKSHRGGY 409
++ RR GD + + P + + EL W + +++S + W+W + GY
Sbjct: 300 GIDLPYKVTGRRAGDVLNLTAKPDRAKRELKWQTEL-QVEDSCKDLWKWTTENPFGY 355
>CGD|CAL0000448 [details] [associations]
symbol:GAL10 species:5476 "Candida albicans" [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=IGI] [GO:0019388
"galactose catabolic process" evidence=IEP;IGI;IMP] [GO:0001403
"invasive growth in response to glucose limitation" evidence=IMP]
[GO:0009272 "fungal-type cell wall biogenesis" evidence=IMP]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0034599
"cellular response to oxidative stress" evidence=IMP] [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0042149 "cellular response to glucose starvation" evidence=IMP]
[GO:0044182 "filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0060257 "negative regulation of
flocculation" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:0033499 "galactose catabolic process via
UDP-galactose" evidence=IEA] [GO:0042125 "protein galactosylation"
evidence=IEA] [GO:0004034 "aldose 1-epimerase activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008183 InterPro:IPR011013 InterPro:IPR014718
Pfam:PF01263 Pfam:PF01370 InterPro:IPR016040 CGD:CAL0000448
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0034599
GO:GO:0030246 GO:GO:0042149 GO:GO:0009272 GO:GO:0044237
SUPFAM:SSF74650 GO:GO:0001403 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:AACQ01000118 EMBL:AACQ01000119 Gene3D:2.70.98.10 GO:GO:0019388
GO:GO:0060257 GO:GO:1900429 eggNOG:COG2017 KO:K15917
RefSeq:XP_713732.1 RefSeq:XP_713766.1 ProteinModelPortal:Q59VY6
SMR:Q59VY6 STRING:Q59VY6 GeneID:3644583 GeneID:3644609
KEGG:cal:CaO19.11156 KEGG:cal:CaO19.3672 Uniprot:Q59VY6
Length = 675
Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
Identities = 129/350 (36%), Positives = 186/350 (53%)
Query: 72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
++LVTGGAGYIGSH + L+ + Y+V IVDNLS + AV ++ + + + F D+
Sbjct: 5 YILVTGGAGYIGSHTVIELISNGYKVVIVDNLSNSSYDAVARIEFIVKQ--HVPFYDVDI 62
Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
+ + +NK F + V+HFAA+ VGEST PL YY N S T+ +LE + V T+
Sbjct: 63 RNYEQLNKVFQDYKISGVIHFAALKAVGESTKIPLAYYDNNVSGTVNLLEVCKANDVKTI 122
Query: 192 IYSSTCATYGEPEK------MPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMA--VM 243
++SS+ YG+ + +PI E P P NPYG+ K + E I+ D NSD A V
Sbjct: 123 VFSSSATVYGDVTRFGDNSMIPIPEHCPMDPTNPYGRTKFIIESILKDIY-NSDDAWKVA 181
Query: 244 ILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCV 303
ILRYFN IG+ P G LGE P L + A G L + G DY++ DGT +
Sbjct: 182 ILRYFNPIGAHPSGLLGEDP---LGIPNNLLPYLAQVAIGRREKLSIFGNDYNSRDGTPI 238
Query: 304 RDYIDVNDLVDAHVKALERAQP-KKVGIY---NVGTGKGRSVKEFVEACKKATSANIKVI 359
RDYI V DL H+ AL + + G+Y N+GTGKG +V E A K +
Sbjct: 239 RDYIHVVDLAKGHIAALAYLKNLQSKGLYREWNLGTGKGSTVFEVYHAFSKVVGRELPHE 298
Query: 360 YEPRRPGDYAEVYSDPTKIRLELNWTAKYTNLQESLEIAWRWQKSHRGGY 409
RR GD ++ + P + EL W + T + ++ + W+W + G+
Sbjct: 299 VVGRRAGDVLDLTAKPDRANKELQWKTELT-IDDACKDLWKWTTENPFGF 347
>UNIPROTKB|Q59VY6 [details] [associations]
symbol:GAL10 "Putative uncharacterized protein GAL10"
species:237561 "Candida albicans SC5314" [GO:0001403 "invasive
growth in response to glucose limitation" evidence=IMP] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=IGI] [GO:0009272
"fungal-type cell wall biogenesis" evidence=IMP] [GO:0019388
"galactose catabolic process" evidence=IGI;IMP] [GO:0030447
"filamentous growth" evidence=IMP] [GO:0034599 "cellular response
to oxidative stress" evidence=IMP] [GO:0042149 "cellular response
to glucose starvation" evidence=IMP] [GO:0044182 "filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:0060257 "negative regulation of flocculation" evidence=IMP]
[GO:1900429 "negative regulation of filamentous growth of a
population of unicellular organisms" evidence=IMP]
InterPro:IPR001509 InterPro:IPR005886 InterPro:IPR008183
InterPro:IPR011013 InterPro:IPR014718 Pfam:PF01263 Pfam:PF01370
InterPro:IPR016040 CGD:CAL0000448 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0034599 GO:GO:0030246 GO:GO:0042149
GO:GO:0009272 GO:GO:0044237 SUPFAM:SSF74650 GO:GO:0001403
GO:GO:0003978 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 EMBL:AACQ01000118 EMBL:AACQ01000119
Gene3D:2.70.98.10 GO:GO:0019388 GO:GO:0060257 GO:GO:1900429
eggNOG:COG2017 KO:K15917 RefSeq:XP_713732.1 RefSeq:XP_713766.1
ProteinModelPortal:Q59VY6 SMR:Q59VY6 STRING:Q59VY6 GeneID:3644583
GeneID:3644609 KEGG:cal:CaO19.11156 KEGG:cal:CaO19.3672
Uniprot:Q59VY6
Length = 675
Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
Identities = 129/350 (36%), Positives = 186/350 (53%)
Query: 72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
++LVTGGAGYIGSH + L+ + Y+V IVDNLS + AV ++ + + + F D+
Sbjct: 5 YILVTGGAGYIGSHTVIELISNGYKVVIVDNLSNSSYDAVARIEFIVKQ--HVPFYDVDI 62
Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
+ + +NK F + V+HFAA+ VGEST PL YY N S T+ +LE + V T+
Sbjct: 63 RNYEQLNKVFQDYKISGVIHFAALKAVGESTKIPLAYYDNNVSGTVNLLEVCKANDVKTI 122
Query: 192 IYSSTCATYGEPEK------MPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMA--VM 243
++SS+ YG+ + +PI E P P NPYG+ K + E I+ D NSD A V
Sbjct: 123 VFSSSATVYGDVTRFGDNSMIPIPEHCPMDPTNPYGRTKFIIESILKDIY-NSDDAWKVA 181
Query: 244 ILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCV 303
ILRYFN IG+ P G LGE P L + A G L + G DY++ DGT +
Sbjct: 182 ILRYFNPIGAHPSGLLGEDP---LGIPNNLLPYLAQVAIGRREKLSIFGNDYNSRDGTPI 238
Query: 304 RDYIDVNDLVDAHVKALERAQP-KKVGIY---NVGTGKGRSVKEFVEACKKATSANIKVI 359
RDYI V DL H+ AL + + G+Y N+GTGKG +V E A K +
Sbjct: 239 RDYIHVVDLAKGHIAALAYLKNLQSKGLYREWNLGTGKGSTVFEVYHAFSKVVGRELPHE 298
Query: 360 YEPRRPGDYAEVYSDPTKIRLELNWTAKYTNLQESLEIAWRWQKSHRGGY 409
RR GD ++ + P + EL W + T + ++ + W+W + G+
Sbjct: 299 VVGRRAGDVLDLTAKPDRANKELQWKTELT-IDDACKDLWKWTTENPFGF 347
>RGD|621493 [details] [associations]
symbol:Gale "UDP-galactose-4-epimerase" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IEA;ISO]
[GO:0006012 "galactose metabolic process" evidence=IEA;ISO]
[GO:0019388 "galactose catabolic process" evidence=ISO] [GO:0042803
"protein homodimerization activity" evidence=ISO] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214
InterPro:IPR016040 RGD:621493 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087 GO:GO:0003978
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 GO:GO:0019388 HOVERGEN:HBG001396
OrthoDB:EOG4B5P5D EMBL:X53949 IPI:IPI00193573 PIR:S11223
UniGene:Rn.29908 ProteinModelPortal:P18645 SMR:P18645 STRING:P18645
PRIDE:P18645 InParanoid:P18645 ArrayExpress:P18645
Genevestigator:P18645 GermOnline:ENSRNOG00000009712 Uniprot:P18645
Length = 347
Score = 528 (190.9 bits), Expect = 8.3e-51, P = 8.3e-51
Identities = 136/347 (39%), Positives = 188/347 (54%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS---RGNIGAVKVLQELFPEPGR-LQFIY 128
VLVTGGAGYIGSH L LL+ Y ++DN RG + L+ + GR ++F
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYSPVVIDNFHNSIRGEDSMPESLRRVQELTGRSVEFEE 64
Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH-NITSNTLVVLESMARHG 187
D+ D A+ F ++ F AV+HFA + VGES PL YY N+T T+ +LE M G
Sbjct: 65 MDILDQAALQHLFKKHNFKAVIHFAGLKAVGESVQKPLDYYRVNLTG-TIQLLEIMRAMG 123
Query: 188 VDTLIYSSTCATYGEPEKMPITEETP--QAPINPYGKAKKMAEDIILDFSKNSDMA--VM 243
V +L++SS+ YG+P +P + P + PYGK+K E++I D + +D A +
Sbjct: 124 VKSLVFSSSATVYGKP--VPASGRGPPHRGCTKPYGKSKFFIEEMIQDLCR-ADTAWNAV 180
Query: 244 ILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCV 303
+LRYF IG+ R+GE P+ + A G L V G DY+T DGT V
Sbjct: 181 LLRYFIPIGAHRSARIGEDPQGI---PNNLMPYVSQVAIGRREALNVFGDDYATEDGTGV 237
Query: 304 RDYIDVNDLVDAHVKALERAQPKKVG--IYNVGTGKGRSVKEFVEACKKATSANIKVIYE 361
RDYI V DL H+ AL++ + ++ G IYN+GTG G SV + V+A +KA+ I
Sbjct: 238 RDYIHVVDLAKGHIAALKKLK-EQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVV 296
Query: 362 PRRPGDYAEVYSDPTKIRLELNWTAKYTNLQESLEIAWRWQKSHRGG 408
RR GD A Y++P+ EL WTA L E WRWQK + G
Sbjct: 297 ARREGDVAACYANPSLAHEELGWTAAL-GLDRMCEDLWRWQKQNPSG 342
>POMBASE|SPBPB2B2.12c [details] [associations]
symbol:gal10 species:4896 "Schizosaccharomyces pombe"
[GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IDA]
[GO:0004034 "aldose 1-epimerase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0030246 "carbohydrate binding" evidence=IEA] [GO:0033499
"galactose catabolic process via UDP-galactose" evidence=ISS]
[GO:0033554 "cellular response to stress" evidence=IEP] [GO:0042125
"protein galactosylation" evidence=IMP] [GO:0050662 "coenzyme
binding" evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008183 InterPro:IPR011013 InterPro:IPR014718
Pfam:PF01263 Pfam:PF01370 UniPathway:UPA00214 UniPathway:UPA00242
InterPro:IPR016040 PomBase:SPBPB2B2.12c GO:GO:0005829 GO:GO:0005634
GO:GO:0033554 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0030246 EMBL:CU329671 GenomeReviews:CU329671_GR
SUPFAM:SSF74650 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
Gene3D:2.70.98.10 RefSeq:NP_596858.1 ProteinModelPortal:Q9HDU3
STRING:Q9HDU3 EnsemblFungi:SPBPB2B2.12c.1 GeneID:2541411
KEGG:spo:SPBPB2B2.12c eggNOG:COG2017 HOGENOM:HOG000247896 KO:K15917
OMA:CKDLWKW OrthoDB:EOG4NKG3T BRENDA:5.1.3.2 NextBio:20802517
GO:GO:0004034 GO:GO:0033499 GO:GO:0042125 InterPro:IPR018052
PROSITE:PS00545 Uniprot:Q9HDU3
Length = 713
Score = 503 (182.1 bits), Expect = 3.7e-48, P = 3.7e-48
Identities = 125/348 (35%), Positives = 176/348 (50%)
Query: 72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
++LVTGGAGYIGSH + L+ Y+V IVDNL AV ++ + + ++F DL
Sbjct: 7 YILVTGGAGYIGSHTVIELINHGYKVIIVDNLCNSCYDAVARVEFIVRKS--IKFFKLDL 64
Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
D + + + F V+HFAA+ VGES PL+YY N T+ +L M H V T+
Sbjct: 65 RDKEGLAQIFDTFKIKGVIHFAALKAVGESMKLPLEYYDNNICGTITLLNVMREHRVKTV 124
Query: 192 IYSSTCATYGEPEK----MPITEETPQAPINPYGKAKKMAEDIILDF-SKNSDMAVMILR 246
++SS+ YG+ + +PI E P P NPYGK K E+II D + ++ ILR
Sbjct: 125 VFSSSATVYGDATRFDNMIPIPESCPNDPTNPYGKTKYAIENIIKDLHTSDNTWRGAILR 184
Query: 247 YFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRDY 306
YFN IG+ P G LGE P L + A G L V G DY + DGT +RDY
Sbjct: 185 YFNPIGAHPSGLLGEDP---LGIPNNLLPFLAQVAIGRREKLLVFGDDYDSHDGTPIRDY 241
Query: 307 IDVNDLVDAHVKALERAQP--KKVGIY---NVGTGKGRSVKEFVEACKKATSANIKVIYE 361
I V DL H+ AL G+Y N+GTGKG SV + A K ++
Sbjct: 242 IHVVDLAKGHIAALNYLNKINNSEGMYREWNLGTGKGSSVFDIYHAFCKEVGKDLPYEVV 301
Query: 362 PRRPGDYAEVYSDPTKIRLELNWTAKYTNLQESLEIAWRWQKSHRGGY 409
RR GD + + P + EL W A+ + + ++ W+W + G+
Sbjct: 302 GRRTGDVLNLTASPNRANSELKWKAELS-ITDACRDLWKWTIENPFGF 348
>UNIPROTKB|G4MX57 [details] [associations]
symbol:MGG_08012 "UDP-glucose 4-epimerase" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:CM001232 KO:K01784 RefSeq:XP_003714962.1
ProteinModelPortal:G4MX57 SMR:G4MX57 EnsemblFungi:MGG_08012T0
GeneID:2678278 KEGG:mgr:MGG_08012 Uniprot:G4MX57
Length = 369
Score = 501 (181.4 bits), Expect = 6.0e-48, P = 6.0e-48
Identities = 124/356 (34%), Positives = 188/356 (52%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
VL+TGG GYIGS +L LL++ Y V IVDNL + A+ ++ + + R F D+
Sbjct: 6 VLITGGTGYIGSFTSLALLENDYDVVIVDNLYNSSAVAIDRIELICGK--RPAFHNVDIT 63
Query: 133 DAKAVNKFFSENA-FDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
D A++K F + D+V+HFAA+ VGES PL+YY ++ +L SM +H V +
Sbjct: 64 DEAALDKVFDAHPEIDSVIHFAALKAVGESGEIPLEYYRVNVGGSISLLRSMQKHNVCNI 123
Query: 192 IYSSTCATYGE----PEKMPITEETPQAPINPYGKAKKMAEDIILDF---SKNS------ 238
++SS+ YG+ P +PI E P P N YG+ K ED+I D +N+
Sbjct: 124 VFSSSATVYGDATRVPNMIPIPEHCPIGPTNTYGRTKSTIEDVISDHVNAQRNNLKKADK 183
Query: 239 --DM-AVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDY 295
DM +LRYFN G+ P G +GE P+ + G A G L V G DY
Sbjct: 184 PFDMWNGALLRYFNPCGAHPSGLMGEDPQGVPFNLLPLLG---QVATGQREKLLVFGDDY 240
Query: 296 STADGTCVRDYIDVNDLVDAHVKALERAQPKKVGI--YNVGTGKGRSVKEFVEACKKATS 353
S+ DGT +RDYI V DL H+ AL + K G+ +N+G+G+G +V E ++A
Sbjct: 241 SSRDGTAIRDYIHVLDLAKGHLAALNYLRDNKPGVKAWNLGSGRGSTVFEMIKAFSSVVG 300
Query: 354 ANIKVIYEPRRPGDYAEVYSDPTKIRLELNWTAKYTNLQESLEIAWRWQKSHRGGY 409
++ PRR GD ++ ++P EL W + ++++ + W+W K++ GY
Sbjct: 301 RDLPYEVVPRRQGDVLDLTANPALANKELGWKTEL-RMEDACQDLWKWVKNNPQGY 355
>ASPGD|ASPL0000035245 [details] [associations]
symbol:AN2951 species:162425 "Emericella nidulans"
[GO:0006012 "galactose metabolic process" evidence=RCA] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=RCA] [GO:0005575
"cellular_component" evidence=ND] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA]
InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:BN001306 EMBL:AACD01000051 GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
OMA:CEAILAD RefSeq:XP_660555.1 ProteinModelPortal:Q5B929
STRING:Q5B929 EnsemblFungi:CADANIAT00010133 GeneID:2873905
KEGG:ani:AN2951.2 OrthoDB:EOG4B8NNF Uniprot:Q5B929
Length = 428
Score = 290 (107.1 bits), Expect = 1.7e-47, Sum P(3) = 1.7e-47
Identities = 66/172 (38%), Positives = 92/172 (53%)
Query: 218 NPYGKAKKMAEDIILDFSKNS-DMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGA 276
NPYG+ K M E I+ D + + + ++ LRYFN IG D G LGE P+ + +
Sbjct: 236 NPYGRTKWMCEAILADLAASDPEWTIVALRYFNPIGCDESGLLGEDPK---QTPTNLLPV 292
Query: 277 CFDAARGIIAGLKVKGTDYSTADGTCVRDYIDVNDLVDAHVKALERAQPKKVG----IYN 332
G L + GTD+ T DGT VRD+I V DL H+ AL+ A +K+ +N
Sbjct: 293 VVKVMTGEYNELSMFGTDWETEDGTAVRDFIHVTDLARGHIAALDAANERKLAENFRAFN 352
Query: 333 VGTGKGRSVKEFVEACKKATSANIKVIYEPRRPGDYAEVYSDPTKIRLELNW 384
+GTG+G SVKE V+A + + I V PRRPGD + T+ + EL W
Sbjct: 353 LGTGRGHSVKEVVDAMESVSRKQIPVRAAPRRPGDVGSCVAVATRSQQELRW 404
Score = 119 (46.9 bits), Expect = 1.7e-47, Sum P(3) = 1.7e-47
Identities = 29/90 (32%), Positives = 45/90 (50%)
Query: 143 ENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGE 202
++ V+HFAA V ES +PLKYY N S + ++ ++G+ T I+SS+ YG
Sbjct: 138 KSKISGVIHFAAYKAVEESIKNPLKYYANNVSGLIDFASTLGKYGIKTFIFSSSATVYGT 197
Query: 203 --PEKMPITEETPQAPINPYGKAKKMAEDI 230
+P+ EE Y A +A+ I
Sbjct: 198 LATSGLPLKEELCAHKDEIYHDADGVAQTI 227
Score = 116 (45.9 bits), Expect = 1.7e-47, Sum P(3) = 1.7e-47
Identities = 21/33 (63%), Positives = 26/33 (78%)
Query: 72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS 104
++LVTGG G+IGSH L LLK SY V ++DNLS
Sbjct: 48 YILVTGGLGFIGSHTTLELLKASYNVVVIDNLS 80
>ASPGD|ASPL0000073187 [details] [associations]
symbol:ugeA species:162425 "Emericella nidulans"
[GO:0006012 "galactose metabolic process" evidence=RCA;IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=RCA;IDA] [GO:0005622 "intracellular"
evidence=IDA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0042125 "protein
galactosylation" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 EMBL:BN001303
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 OMA:ADKAWNA
ProteinModelPortal:C8VAU8 EnsemblFungi:CADANIAT00005702
Uniprot:C8VAU8
Length = 371
Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
Identities = 114/358 (31%), Positives = 165/358 (46%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRL-QFIYADL 131
VLVTGG GYIGS L LL+ Y+V + DNL + A+ ++ + + Q D
Sbjct: 6 VLVTGGTGYIGSFTTLALLEAGYKVVVADNLYNSSAEALNRIELISGKKAEFAQLDVTDE 65
Query: 132 GDAKAVNKFFSE-NAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT 190
V + + ++ AV GE LD Y+ N+ ++ + + +
Sbjct: 66 AAFDKVFEAHPDIDSVIHFAALKAVGESGEKPLD--YYHVNVYGTICLLRSMVRHNVTNI 123
Query: 191 LIYSSTCATYGE---PEKMPITEETPQAPINPYGKAKKMAE----DIILDFSKNSDMAV- 242
+ SS P+ +PI E P P NPYG K E D+I N+ A
Sbjct: 124 VFSSSATVYGDATRFPDMIPIPEHCPLGPTNPYGNTKFAIELAITDVINAQRNNAKKAGN 183
Query: 243 ---------MILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGT 293
+LRYFN G+ P G +GE P+ + A G L V G
Sbjct: 184 ETEAAKWNGALLRYFNPAGAHPSGIMGEDPQGVPYN---LLPLLAQVATGKREKLLVFGD 240
Query: 294 DYSTADGTCVRDYIDVNDLVDAHVKALE--RAQPKKVGIYNVGTGKGRSVKEFVEACKKA 351
DY++ DGT +RDYI + DL D H+KAL RA V +N+GTG+G +V E + A KA
Sbjct: 241 DYASHDGTAIRDYIHILDLADGHLKALNYLRANNPGVRAWNLGTGRGSTVYEMIRAFSKA 300
Query: 352 TSANIKVIYEPRRPGDYAEVYSDPTKIRLELNWTAKYTNLQESLEIAWRWQKSHRGGY 409
++ PRR GD + S+PT+ EL W A+ T L+++ E W W K++ GY
Sbjct: 301 VGRDLPYEVAPRRAGDVLNLTSNPTRANTELGWKAQRT-LEQACEDLWLWTKNNPQGY 357
>UNIPROTKB|Q5QPP3 [details] [associations]
symbol:GALE "UDP-glucose 4-epimerase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IEA] [GO:0006012 "galactose metabolic process"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
PANTHER:PTHR10366:SF39 TIGRFAMs:TIGR01179 EMBL:AL031295
UniGene:Hs.632380 HGNC:HGNC:4116 HOVERGEN:HBG001396 IPI:IPI00644339
SMR:Q5QPP3 Ensembl:ENST00000418277 Uniprot:Q5QPP3
Length = 227
Score = 377 (137.8 bits), Expect = 8.3e-35, P = 8.3e-35
Identities = 91/228 (39%), Positives = 128/228 (56%)
Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH-NITSNTLVVLESMARHGV 188
D+ D A+ + F + +F AV+HFA + VGES PL YY N+T T+ +LE M HGV
Sbjct: 2 DILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTG-TIQLLEIMKAHGV 60
Query: 189 DTLIYSSTCATYGEPEKMPITEETPQAPI-NPYGKAKKMAEDIILDFSK-NSDMAVMILR 246
L++SS+ YG P+ +P+ E P NPYGK+K E++I D + + ++LR
Sbjct: 61 KNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLR 120
Query: 247 YFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRDY 306
YFN G+ G +GE P+ + A G L V G DY T DGT VRDY
Sbjct: 121 YFNPTGAHASGCIGEDPQGI---PNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDY 177
Query: 307 IDVNDLVDAHVKALERAQPKKVG--IYNVGTGKGRSVKEFVEACKKAT 352
I V DL H+ AL + + ++ G IYN+GTG G SV + V+A +KA+
Sbjct: 178 IHVVDLAKGHIAALRKLK-EQCGCRIYNLGTGTGYSVLQMVQAMEKAS 224
>UNIPROTKB|Q5QPP4 [details] [associations]
symbol:GALE "UDP-glucose 4-epimerase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=IEA] [GO:0006012
"galactose metabolic process" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 EMBL:AL031295 UniGene:Hs.632380 HGNC:HGNC:4116
HOVERGEN:HBG001396 IPI:IPI00030229 SMR:Q5QPP4
Ensembl:ENST00000429356 Uniprot:Q5QPP4
Length = 239
Score = 324 (119.1 bits), Expect = 1.3e-34, Sum P(2) = 1.3e-34
Identities = 77/196 (39%), Positives = 106/196 (54%)
Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH-NITSNTLVVLESMARHGV 188
D+ D A+ + F + +F AV+HFA + VGES PL YY N+T T+ +LE M HGV
Sbjct: 2 DILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTG-TIQLLEIMKAHGV 60
Query: 189 DTLIYSSTCATYGEPEKMPITEETPQAPI-NPYGKAKKMAEDIILDFSK-NSDMAVMILR 246
L++SS+ YG P+ +P+ E P NPYGK+K E++I D + + ++LR
Sbjct: 61 KNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLR 120
Query: 247 YFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRDY 306
YFN G+ G +GE P+ + A G L V G DY T DGT VRDY
Sbjct: 121 YFNPTGAHASGCIGEDPQGI---PNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDY 177
Query: 307 IDVNDLVDAHVKALER 322
I V DL H+ AL +
Sbjct: 178 IHVVDLAKGHIAALRK 193
Score = 67 (28.6 bits), Expect = 1.3e-34, Sum P(2) = 1.3e-34
Identities = 20/59 (33%), Positives = 30/59 (50%)
Query: 330 IYNVGTGKGR--SVKEFVEACKKATSANIKVIYEPRRPGDYAEVYSDPTKIRLELNWTA 386
I+ V KG ++++ E C KV+ RR GD A Y++P+ + EL WTA
Sbjct: 178 IHVVDLAKGHIAALRKLKEQC--GCRIPYKVV--ARREGDVAACYANPSLAQEELGWTA 232
>UNIPROTKB|Q5QPP2 [details] [associations]
symbol:GALE "UDP-glucose 4-epimerase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IEA] [GO:0006012 "galactose metabolic process"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
PANTHER:PTHR10366:SF39 EMBL:AL031295 UniGene:Hs.632380
HGNC:HGNC:4116 HOVERGEN:HBG001396 IPI:IPI00644364 SMR:Q5QPP2
Ensembl:ENST00000425913 Uniprot:Q5QPP2
Length = 195
Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 77/192 (40%), Positives = 109/192 (56%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS---RGNIGAVKVLQELFPEPGR-LQFIY 128
VLVTGGAGYIGSH L LL+ Y ++DN RG + L+ + GR ++F
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEE 64
Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH-NITSNTLVVLESMARHG 187
D+ D A+ + F + +F AV+HFA + VGES PL YY N+T T+ +LE M HG
Sbjct: 65 MDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTG-TIQLLEIMKAHG 123
Query: 188 VDTLIYSSTCATYGEPEKMPITEETPQAPI-NPYGKAKKMAEDIILDFSK-NSDMAVMIL 245
V L++SS+ YG P+ +P+ E P NPYGK+K E++I D + + ++L
Sbjct: 124 VKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLL 183
Query: 246 RYFNVIGSDPEG 257
RYFN G+ G
Sbjct: 184 RYFNPTGAHASG 195
>UNIPROTKB|Q5QPP1 [details] [associations]
symbol:GALE "UDP-glucose 4-epimerase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IEA] [GO:0006012 "galactose metabolic process"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
PANTHER:PTHR10366:SF39 EMBL:AL031295 UniGene:Hs.632380
HGNC:HGNC:4116 HOVERGEN:HBG001396 IPI:IPI00641123 SMR:Q5QPP1
Ensembl:ENST00000445705 Uniprot:Q5QPP1
Length = 194
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 76/188 (40%), Positives = 108/188 (57%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS---RGNIGAVKVLQELFPEPGR-LQFIY 128
VLVTGGAGYIGSH L LL+ Y ++DN RG + L+ + GR ++F
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEE 64
Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH-NITSNTLVVLESMARHG 187
D+ D A+ + F + +F AV+HFA + VGES PL YY N+T T+ +LE M HG
Sbjct: 65 MDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTG-TIQLLEIMKAHG 123
Query: 188 VDTLIYSSTCATYGEPEKMPITEETPQAPI-NPYGKAKKMAEDIILDFSK-NSDMAVMIL 245
V L++SS+ YG P+ +P+ E P NPYGK+K E++I D + + ++L
Sbjct: 124 VKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLL 183
Query: 246 RYFNVIGS 253
RYFN G+
Sbjct: 184 RYFNPTGA 191
>TIGR_CMR|CHY_0979 [details] [associations]
symbol:CHY_0979 "dTDP-glucose 4,6-dehydratase"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=ISS]
[GO:0019305 "dTDP-rhamnose biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0009225 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 RefSeq:YP_359826.1 ProteinModelPortal:Q3ADF8
SMR:Q3ADF8 STRING:Q3ADF8 GeneID:3726804 KEGG:chy:CHY_0979
PATRIC:21275091 OMA:AEFRPEA ProtClustDB:CLSK2310403
BioCyc:CHYD246194:GJCN-978-MONOMER Uniprot:Q3ADF8
Length = 309
Score = 236 (88.1 bits), Expect = 2.1e-28, Sum P(2) = 2.1e-28
Identities = 58/181 (32%), Positives = 99/181 (54%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
+LVTGGAG+IGS A +R + + IVD L+ G ++ ++E+ R++F AD+
Sbjct: 3 ILVTGGAGFIGS-AFVRKYAYDHELIIVDKLTYA--GDLRRIEEV---RDRIKFYKADVA 56
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
D A+ + F + +AV+HFAA ++V S DP + T V+L++ ++G++ +
Sbjct: 57 DKTAIEEIFDKEKPEAVVHFAAESHVDRSIQDPTPFIETNVKGTQVMLDASRKYGIEKFV 116
Query: 193 YSSTCATYGEPEKM-PITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVI 251
+ ST YGE K TEE+P P +PY +K A+ + + + + V++ R N
Sbjct: 117 HISTDEVYGELGKEGQFTEESPLRPNSPYSVSKAAADMLARAYHRTYGLPVIVARPCNNY 176
Query: 252 G 252
G
Sbjct: 177 G 177
Score = 102 (41.0 bits), Expect = 2.1e-28, Sum P(2) = 2.1e-28
Identities = 34/112 (30%), Positives = 54/112 (48%)
Query: 300 GTCVRDYIDVNDLVDAHVKALERAQPKKVGIYNVGTG--KGRS--VKEFVEACKKATSAN 355
G VR+++ V+D ++A L++ +P + YN+G+G KG VKE + K S
Sbjct: 205 GLNVREWLYVDDCIEAVYLLLQKGKPGEA--YNIGSGEEKGNIEVVKEILRILGKPESL- 261
Query: 356 IKVIYEPRRPG-DYAEVYS-DPTKIRLELNWTAKYTNLQESLEIAWRWQKSH 405
+ + RPG D+ YS + KI++ W K N E + W K H
Sbjct: 262 --ITFVEDRPGHDFR--YSLNSKKIKMNYAWKHK-VNFNEGIRFVIDWYKKH 308
>TIGR_CMR|DET_0204 [details] [associations]
symbol:DET_0204 "NAD-dependent epimerase/dehydratase
family protein" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0009243 "O
antigen biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR020904 Pfam:PF01370 PROSITE:PS00061 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0016491 EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0044237
GO:GO:0055114 KO:K01784 HOGENOM:HOG000167994 RefSeq:YP_180952.1
ProteinModelPortal:Q3Z9Z7 STRING:Q3Z9Z7 GeneID:3230493
KEGG:det:DET0204 PATRIC:21607483 OMA:NTLATHN ProtClustDB:CLSK837597
BioCyc:DETH243164:GJNF-204-MONOMER Uniprot:Q3Z9Z7
Length = 312
Score = 231 (86.4 bits), Expect = 2.2e-27, Sum P(2) = 2.2e-27
Identities = 65/185 (35%), Positives = 97/185 (52%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
VLVTGG G+IGSH LL ++V ++DNLS G++ +K Q +L+ I +L
Sbjct: 4 VLVTGGCGFIGSHLVDALLSQGFKVRVMDNLSNGSLENLKCGQR-----DKLEIINGNLT 58
Query: 133 DAKAVNKFFSENAF---DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD 189
D KF ++A + V H AA A V S D N T T +LE+M R+ VD
Sbjct: 59 D-----KFLLDSAVKGCETVFHLAAHANVQNSAKDTGIDLENNTLATHNLLEAMRRNRVD 113
Query: 190 TLIYSSTCATYGEPEKMPITEET-PQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYF 248
L+++S+ A YGE + E+ P PI+ YG +K E +I +S + + R+
Sbjct: 114 RLVFASSAAVYGESGLTVLDEDYGPLLPISLYGASKLAGEGLISAYSHLYGLKATMFRFA 173
Query: 249 NVIGS 253
N++GS
Sbjct: 174 NIVGS 178
Score = 98 (39.6 bits), Expect = 2.2e-27, Sum P(2) = 2.2e-27
Identities = 32/100 (32%), Positives = 53/100 (53%)
Query: 299 DGTCVRDYIDVNDLVDAHVKALERAQPKKVGIYNVGTGKGRSVKEFVEACKKATSANIK- 357
DG+ + Y+ V+D V + E++ K +G+YN+GT +V++ AC A+ +K
Sbjct: 204 DGSQSKPYLHVSDCVAGMLLGFEKST-KNLGLYNLGTPDSVAVRDI--ACLVASEMGLKN 260
Query: 358 VIY-----EPRRPGDYAEVYSDPTKIRLELNWTAKYTNLQ 392
V Y E GD +V D ++IR L + K+T+LQ
Sbjct: 261 VCYSYSGGERGWQGDAPQVRFDISRIRT-LGFKPKFTSLQ 299
>UNIPROTKB|Q8E8H8 [details] [associations]
symbol:wcvA "UDP-glucuronate 4-epimerase WcvA"
species:211586 "Shewanella oneidensis MR-1" [GO:0009243 "O antigen
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE014299
GenomeReviews:AE014299_GR HOGENOM:HOG000168000 KO:K08679
GO:GO:0050378 OMA:NTAMPFS GO:GO:0009243 HSSP:P27830
RefSeq:NP_720202.1 ProteinModelPortal:Q8E8H8 GeneID:1172268
KEGG:son:SO_4686 PATRIC:23529037 ProtClustDB:CLSK907767
Uniprot:Q8E8H8
Length = 335
Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 92/316 (29%), Positives = 147/316 (46%)
Query: 74 LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFP-EP-GRLQFIYADL 131
LVTG AG+IG++ + RL + V +DNL+ A+K L L P E FI DL
Sbjct: 4 LVTGAAGFIGANVSKRLCAMGHEVVGIDNLNDYYDVALK-LARLAPLEALSNFHFIKLDL 62
Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
D + + K F++ F V+H AA A V S +PL Y + L +LE H ++ L
Sbjct: 63 ADREGIAKLFAQQGFQRVIHLAAQAGVRYSLDNPLAYADSNLVGHLTILEGCRHHKIEHL 122
Query: 192 IYSSTCATYGEPEKMPI-TEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNV 250
+Y+S+ + YG +KMP TE++ PI+ Y KK E + +S + LR+F V
Sbjct: 123 VYASSSSVYGLNQKMPFSTEDSVDHPISLYAATKKANELMSHTYSHLYQLPTTGLRFFTV 182
Query: 251 IGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYS--TADGTCVRDYID 308
G P GR P++ A F + I+AG + ++ + D T + D ++
Sbjct: 183 YG--PWGR------PDM--------ALFKFTKAILAGETIDVYNHGDLSRDFTYIDDIVE 226
Query: 309 ----VNDLVDAHVK--ALERAQPKKVG----IYNVGTGKGRSVKEFVEACKKATSANIKV 358
V D + +E P ++N+G G + +F+ A ++A K
Sbjct: 227 GIIRVQDKPPSPTPDWRVETGTPANSSAPYRVFNIGNGSPVQLLDFITALERALGIEAKK 286
Query: 359 IYEPRRPGDYAEVYSD 374
+ P +PGD ++D
Sbjct: 287 QFLPMQPGDVHATWAD 302
>TIGR_CMR|SO_4686 [details] [associations]
symbol:SO_4686 "NAD dependent epimerase/dehydratase family
protein" species:211586 "Shewanella oneidensis MR-1" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] [GO:0009243 "O antigen
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE014299
GenomeReviews:AE014299_GR HOGENOM:HOG000168000 KO:K08679
GO:GO:0050378 OMA:NTAMPFS GO:GO:0009243 HSSP:P27830
RefSeq:NP_720202.1 ProteinModelPortal:Q8E8H8 GeneID:1172268
KEGG:son:SO_4686 PATRIC:23529037 ProtClustDB:CLSK907767
Uniprot:Q8E8H8
Length = 335
Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 92/316 (29%), Positives = 147/316 (46%)
Query: 74 LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFP-EP-GRLQFIYADL 131
LVTG AG+IG++ + RL + V +DNL+ A+K L L P E FI DL
Sbjct: 4 LVTGAAGFIGANVSKRLCAMGHEVVGIDNLNDYYDVALK-LARLAPLEALSNFHFIKLDL 62
Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
D + + K F++ F V+H AA A V S +PL Y + L +LE H ++ L
Sbjct: 63 ADREGIAKLFAQQGFQRVIHLAAQAGVRYSLDNPLAYADSNLVGHLTILEGCRHHKIEHL 122
Query: 192 IYSSTCATYGEPEKMPI-TEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNV 250
+Y+S+ + YG +KMP TE++ PI+ Y KK E + +S + LR+F V
Sbjct: 123 VYASSSSVYGLNQKMPFSTEDSVDHPISLYAATKKANELMSHTYSHLYQLPTTGLRFFTV 182
Query: 251 IGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYS--TADGTCVRDYID 308
G P GR P++ A F + I+AG + ++ + D T + D ++
Sbjct: 183 YG--PWGR------PDM--------ALFKFTKAILAGETIDVYNHGDLSRDFTYIDDIVE 226
Query: 309 ----VNDLVDAHVK--ALERAQPKKVG----IYNVGTGKGRSVKEFVEACKKATSANIKV 358
V D + +E P ++N+G G + +F+ A ++A K
Sbjct: 227 GIIRVQDKPPSPTPDWRVETGTPANSSAPYRVFNIGNGSPVQLLDFITALERALGIEAKK 286
Query: 359 IYEPRRPGDYAEVYSD 374
+ P +PGD ++D
Sbjct: 287 QFLPMQPGDVHATWAD 302
>TIGR_CMR|CBU_0677 [details] [associations]
symbol:CBU_0677 "NAD dependent epimerase/dehydratase
family protein" species:227377 "Coxiella burnetii RSA 493"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009243 "O
antigen biosynthetic process" evidence=ISS] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 HSSP:P09147
EMBL:AF387640 ProteinModelPortal:Q93N66 Uniprot:Q93N66
Length = 344
Score = 208 (78.3 bits), Expect = 1.2e-23, Sum P(2) = 1.2e-23
Identities = 57/180 (31%), Positives = 90/180 (50%)
Query: 74 LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD 133
+VTGGAG+IGSH LL ++V ++DNL G+ + L+ P L F D+ +
Sbjct: 7 IVTGGAGFIGSHMVDLLLDCGFQVRVIDNLKGGHR---RNLEHRANNPD-LTFEIKDICE 62
Query: 134 AKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIY 193
A + F EN D V HFA + + S +P+ Y T+ VLE V L+Y
Sbjct: 63 LSAPHPLF-ENV-DYVFHFAGIGDIVPSIENPIDYLQTNVMGTVRVLECARAANVKKLVY 120
Query: 194 SSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGS 253
+++ + YG + +P E+ P AP PY +K + E+ + + + V +R FN G+
Sbjct: 121 AASSSCYGLAD-VPTREDHPIAPQYPYALSKYLGEEAAFHWFQVYGLPVNSIRIFNAYGT 179
Score = 122 (48.0 bits), Expect = 1.2e-23, Sum P(2) = 1.2e-23
Identities = 44/146 (30%), Positives = 70/146 (47%)
Query: 247 YFNVIGSDPEG-RLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTA-DGTCVR 304
+F V G R+ A +R G + GA F G+ K+ ++ DGT R
Sbjct: 160 WFQVYGLPVNSIRIFNAYGTRVRTTG-VYGAVF----GVFFKQKLADKPFTVVGDGTQRR 214
Query: 305 DYIDVNDLVDAHVKALERAQPKKVG-IYNVGTGKGRSVKEFVEACKKATSANIKVIYEPR 363
D++ V D+ A +KA A+ +KVG +N+G G +S+ VE +V Y P+
Sbjct: 215 DFLYVTDVARAFLKA---AETRKVGETWNLGAGNPQSINRLVELIGG------EVEYIPK 265
Query: 364 RPGDYAEVYSDPTKIRLELNWTAKYT 389
RPG+ ++D +KI+ +L W T
Sbjct: 266 RPGEPDCTWADISKIKRDLGWEPTIT 291
>UNIPROTKB|Q489C2 [details] [associations]
symbol:CPS_0592 "Capsular polysaccharide biosynthesis
protein" species:167879 "Colwellia psychrerythraea 34H" [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] [GO:0045227 "capsule polysaccharide
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0045227 GO:GO:0016857
HOGENOM:HOG000168000 KO:K08679 OMA:NTAMPFS RefSeq:YP_267342.1
ProteinModelPortal:Q489C2 STRING:Q489C2 GeneID:3519977
KEGG:cps:CPS_0592 PATRIC:21464513 ProtClustDB:CLSK2396596
BioCyc:CPSY167879:GI48-679-MONOMER Uniprot:Q489C2
Length = 334
Score = 262 (97.3 bits), Expect = 1.4e-22, P = 1.4e-22
Identities = 95/335 (28%), Positives = 150/335 (44%)
Query: 74 LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD 133
LVTG AG+IGS RL + V +DN++ A+K + E FI D+ D
Sbjct: 4 LVTGAAGFIGSAVVERLCAAGHDVVGIDNINDYYDIALKQARLARIEHASFSFIKMDIAD 63
Query: 134 AKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIY 193
+ + F+ FD V+H AA A V S +P+ Y + L VLE + V LIY
Sbjct: 64 RNVMAELFTAQQFDKVVHLAAQAGVRYSIENPMAYADSNLIGHLNVLEGCRNNQVKHLIY 123
Query: 194 SSTCATYGEPEKMPI-TEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIG 252
+S+ + YG K+P T++T P++ Y KK E + +S ++ LR+F V G
Sbjct: 124 ASSSSVYGLNNKVPFSTKDTVDHPVSLYAATKKSNELMAHSYSHLYNIPTTGLRFFTVYG 183
Query: 253 SDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRDYIDVNDL 312
S GR AP ++ ++G D G + D++ D V I + D+
Sbjct: 184 S--WGRPDMAPYIFTKKI--LNGDTIDINNN---GDMWR--DFTHVDDI-VEGVIRIADV 233
Query: 313 V---DAHVKALERAQPKK----VGIYNVGTGKGRSVKEFVEACKKATSANIKVIYEPRRP 365
+ DA K +E P +YN+G G S+ +FV+A + K + +P
Sbjct: 234 IPERDAEWK-VESGSPATSSAPYSVYNIGHGSPISLMDFVKAIEDELGIEAKKNFREMQP 292
Query: 366 GDYAEVYSDPTKIRLELNWTAKYTNLQESLE-IAW 399
GD + Y+D + N+ K + + E + W
Sbjct: 293 GDVYQTYADTQDLFKATNYVPKISVKEGVAELVVW 327
>TIGR_CMR|CPS_0592 [details] [associations]
symbol:CPS_0592 "capsular polysaccharide biosynthesis
protein" species:167879 "Colwellia psychrerythraea 34H" [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] [GO:0045227 "capsule polysaccharide
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0045227 GO:GO:0016857
HOGENOM:HOG000168000 KO:K08679 OMA:NTAMPFS RefSeq:YP_267342.1
ProteinModelPortal:Q489C2 STRING:Q489C2 GeneID:3519977
KEGG:cps:CPS_0592 PATRIC:21464513 ProtClustDB:CLSK2396596
BioCyc:CPSY167879:GI48-679-MONOMER Uniprot:Q489C2
Length = 334
Score = 262 (97.3 bits), Expect = 1.4e-22, P = 1.4e-22
Identities = 95/335 (28%), Positives = 150/335 (44%)
Query: 74 LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD 133
LVTG AG+IGS RL + V +DN++ A+K + E FI D+ D
Sbjct: 4 LVTGAAGFIGSAVVERLCAAGHDVVGIDNINDYYDIALKQARLARIEHASFSFIKMDIAD 63
Query: 134 AKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIY 193
+ + F+ FD V+H AA A V S +P+ Y + L VLE + V LIY
Sbjct: 64 RNVMAELFTAQQFDKVVHLAAQAGVRYSIENPMAYADSNLIGHLNVLEGCRNNQVKHLIY 123
Query: 194 SSTCATYGEPEKMPI-TEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIG 252
+S+ + YG K+P T++T P++ Y KK E + +S ++ LR+F V G
Sbjct: 124 ASSSSVYGLNNKVPFSTKDTVDHPVSLYAATKKSNELMAHSYSHLYNIPTTGLRFFTVYG 183
Query: 253 SDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRDYIDVNDL 312
S GR AP ++ ++G D G + D++ D V I + D+
Sbjct: 184 S--WGRPDMAPYIFTKKI--LNGDTIDINNN---GDMWR--DFTHVDDI-VEGVIRIADV 233
Query: 313 V---DAHVKALERAQPKK----VGIYNVGTGKGRSVKEFVEACKKATSANIKVIYEPRRP 365
+ DA K +E P +YN+G G S+ +FV+A + K + +P
Sbjct: 234 IPERDAEWK-VESGSPATSSAPYSVYNIGHGSPISLMDFVKAIEDELGIEAKKNFREMQP 292
Query: 366 GDYAEVYSDPTKIRLELNWTAKYTNLQESLE-IAW 399
GD + Y+D + N+ K + + E + W
Sbjct: 293 GDVYQTYADTQDLFKATNYVPKISVKEGVAELVVW 327
>TIGR_CMR|BA_1230 [details] [associations]
symbol:BA_1230 "dTDP-glucose 4,6-dehydratase"
species:198094 "Bacillus anthracis str. Ames" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009243
"O antigen biosynthetic process" evidence=ISS] [GO:0019305
"dTDP-rhamnose biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0009225
GO:GO:0008460 TIGRFAMs:TIGR01181 HSSP:P27830 HOGENOM:HOG000168006
KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM RefSeq:NP_843702.1
RefSeq:YP_017844.1 RefSeq:YP_027409.1 PDB:4EGB PDBsum:4EGB
ProteinModelPortal:Q81TP0 SMR:Q81TP0 DNASU:1085406
EnsemblBacteria:EBBACT00000011863 EnsemblBacteria:EBBACT00000016310
EnsemblBacteria:EBBACT00000023983 GeneID:1085406 GeneID:2815086
GeneID:2848339 KEGG:ban:BA_1230 KEGG:bar:GBAA_1230 KEGG:bat:BAS1137
ProtClustDB:CLSK916141 BioCyc:BANT260799:GJAJ-1213-MONOMER
BioCyc:BANT261594:GJ7F-1267-MONOMER Uniprot:Q81TP0
Length = 322
Score = 213 (80.0 bits), Expect = 2.5e-21, Sum P(2) = 2.5e-21
Identities = 56/185 (30%), Positives = 97/185 (52%)
Query: 72 HVLVTGGAGYIGSHAALRLLK--DSYRVTIVDNLS-RGNIGAVKVLQELFPEPGRLQFIY 128
++LVTGGAG+IGS+ +L+ ++Y++ D L+ GN+ VK +Q+ P F+
Sbjct: 2 NILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQD---HPN-YYFVK 57
Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV 188
++ + + + E +++FAA ++V S +P+ +Y T+ +LE + ++
Sbjct: 58 GEIQNGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPH 117
Query: 189 DTLIYSSTCATYGEPEKMP-ITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRY 247
L+ ST YG K TEETP AP +PY +K A+ I L + K + V++ R
Sbjct: 118 IKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPYSSSKASADMIALAYYKTYQLPVIVTRC 177
Query: 248 FNVIG 252
N G
Sbjct: 178 SNNYG 182
Score = 89 (36.4 bits), Expect = 2.5e-21, Sum P(2) = 2.5e-21
Identities = 31/110 (28%), Positives = 50/110 (45%)
Query: 299 DGTCVRDYIDVNDLVDAHVKALERAQPK-KVG-IYNVGTGKGRSVKEFVEACKKATSANI 356
DG VRD++ V D H A++ K +VG +YN+G ++ E VE
Sbjct: 209 DGLNVRDWLHVTD----HCSAIDVVLHKGRVGEVYNIGGNNEKTNVEVVEQIITLLGKTK 264
Query: 357 KVI-YEPRRPGDYAEVYSDPTKIRLELNWTAKYTNLQESLEIAWRWQKSH 405
K I Y R G + K++ E +W KYT ++ L+ +W + +
Sbjct: 265 KDIEYVTDRLGHDRRYAINAEKMKNEFDWEPKYT-FEQGLQETVQWYEKN 313
>ZFIN|ZDB-GENE-030131-5718 [details] [associations]
symbol:tgds "TDP-glucose 4,6-dehydratase"
species:7955 "Danio rerio" [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040
ZFIN:ZDB-GENE-030131-5718 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 GO:GO:0008460 PANTHER:PTHR10366:SF41
HOVERGEN:HBG007741 HSSP:P26391 EMBL:BC066615 IPI:IPI00496965
UniGene:Dr.80538 ProteinModelPortal:Q6NYF5 Uniprot:Q6NYF5
Length = 347
Score = 219 (82.2 bits), Expect = 2.2e-19, Sum P(2) = 2.2e-19
Identities = 60/183 (32%), Positives = 84/183 (45%)
Query: 73 VLVTGGAGYIGSH--AALRLLKDSYRVTIVDNLSR-GNIGAVKVLQELFPEPGRLQFIYA 129
VLVTGGAG+IGSH AL +R+ VDNL N+ ++ +Q FI
Sbjct: 9 VLVTGGAGFIGSHLICALAGRFPHWRIINVDNLQYCSNLKNLRSVQA----SSSYSFIPG 64
Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD 189
D+ D + FS D V H AA +V S + P ++ T V++ + V
Sbjct: 65 DVCDPLFIKHLFSTEHIDVVFHCAAETHVENSFVCPSRFMRVNVDGTAVLVRASLEASVQ 124
Query: 190 TLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFN 249
IY ST YG+ P E +P+ P NPY ++K AE I+ + +I R N
Sbjct: 125 RFIYISTDEVYGDSVDQPFDELSPKRPTNPYSRSKAAAESIVTSYWLKHKFPAVITRSSN 184
Query: 250 VIG 252
V G
Sbjct: 185 VYG 187
Score = 67 (28.6 bits), Expect = 2.2e-19, Sum P(2) = 2.2e-19
Identities = 24/98 (24%), Positives = 47/98 (47%)
Query: 304 RDYIDVNDLVDAHVKALERAQPKKVGIYNVGTGKGRSVKEFVEACKKATSANIKVIYEPR 363
R ++ V+D+ DA + +E+ + IYN+GTG + ++ ++ +K +
Sbjct: 219 RHFLYVSDVTDAFLTVMEKGILGE--IYNIGTGFEIPI---IQLARELVQMTVKSV-SAE 272
Query: 364 RPGDYAEVYSD-P-TKIRLELNWTAKYTNLQESLEIAW 399
D+ E D P T++R +N + K L ++AW
Sbjct: 273 SLDDWLEFVEDRPVTELRYPMN-SVKLHRLGWRPKVAW 309
>UNIPROTKB|Q8ECF3 [details] [associations]
symbol:wbpP "UDP-GlkcNAc C4 epimerase WbpP" species:211586
"Shewanella oneidensis MR-1" [GO:0000271 "polysaccharide
biosynthetic process" evidence=ISS] [GO:0003824 "catalytic
activity" evidence=ISS] InterPro:IPR001509 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0044237 GO:GO:0000271
HOGENOM:HOG000167994 HSSP:P32054 KO:K02473 GO:GO:0003974
RefSeq:NP_718745.1 ProteinModelPortal:Q8ECF3 SMR:Q8ECF3
GeneID:1170882 KEGG:son:SO_3189 PATRIC:23526060 OMA:NEVYNVA
ProtClustDB:CLSK2304490 Uniprot:Q8ECF3
Length = 340
Score = 243 (90.6 bits), Expect = 2.4e-19, P = 2.4e-19
Identities = 95/341 (27%), Positives = 149/341 (43%)
Query: 74 LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG--RLQFIYADL 131
L+TG AG+IGS+ +LLK + V +DN + G + +Q L R FI D+
Sbjct: 19 LITGVAGFIGSNLLEQLLKLNQTVIGLDNFATGRQHNLDEVQSLVTSEQWMRFSFINGDI 78
Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH-NITSNTLVVLESMARHGVDT 190
D N D V+H AA+ V S DP+ NIT L +L++ V +
Sbjct: 79 RDYAICEAVV--NGVDYVLHQAALGSVPRSIADPITTNAANITG-FLNMLQAAKEAEVKS 135
Query: 191 LIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNV 250
Y+++ +TYG+ +P E+ P++PY K + E +++ + LRYFNV
Sbjct: 136 FTYAASSSTYGDHPALPKVEQNIGNPLSPYAVTKYVNELYASVYARTYGFETIGLRYFNV 195
Query: 251 IG--SDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRDYID 308
G DP G A P+ +I G V + DG RD+
Sbjct: 196 FGRRQDPNGAYA-AVIPKWTS-------------SMIKGEDV----FINGDGETSRDFCY 237
Query: 309 VNDLVDAHVKALERAQPKKVGIYNVGTGKGRSVKEFVEACKKATSAN-IKVIYEPR---- 363
++++V ++ A A K +YNV G ++ + A K + +AN I V P
Sbjct: 238 IDNVVQMNILAATAASEAKNEVYNVAVGDRTTLNDLYFAIKDSLNANGINVNQNPNYRDF 297
Query: 364 RPGDYAEVYSDPTKIRLELNWTAKYTN-LQESLEIAWRWQK 403
R GD +D +K L + +YT+ + E + A W K
Sbjct: 298 RAGDVRHSQADVSKAVTRLGY--QYTHKILEGISEAMPWYK 336
>TIGR_CMR|SO_3189 [details] [associations]
symbol:SO_3189 "polysaccharide biosynthesis protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0044237 GO:GO:0000271
HOGENOM:HOG000167994 HSSP:P32054 KO:K02473 GO:GO:0003974
RefSeq:NP_718745.1 ProteinModelPortal:Q8ECF3 SMR:Q8ECF3
GeneID:1170882 KEGG:son:SO_3189 PATRIC:23526060 OMA:NEVYNVA
ProtClustDB:CLSK2304490 Uniprot:Q8ECF3
Length = 340
Score = 243 (90.6 bits), Expect = 2.4e-19, P = 2.4e-19
Identities = 95/341 (27%), Positives = 149/341 (43%)
Query: 74 LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG--RLQFIYADL 131
L+TG AG+IGS+ +LLK + V +DN + G + +Q L R FI D+
Sbjct: 19 LITGVAGFIGSNLLEQLLKLNQTVIGLDNFATGRQHNLDEVQSLVTSEQWMRFSFINGDI 78
Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH-NITSNTLVVLESMARHGVDT 190
D N D V+H AA+ V S DP+ NIT L +L++ V +
Sbjct: 79 RDYAICEAVV--NGVDYVLHQAALGSVPRSIADPITTNAANITG-FLNMLQAAKEAEVKS 135
Query: 191 LIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNV 250
Y+++ +TYG+ +P E+ P++PY K + E +++ + LRYFNV
Sbjct: 136 FTYAASSSTYGDHPALPKVEQNIGNPLSPYAVTKYVNELYASVYARTYGFETIGLRYFNV 195
Query: 251 IG--SDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRDYID 308
G DP G A P+ +I G V + DG RD+
Sbjct: 196 FGRRQDPNGAYA-AVIPKWTS-------------SMIKGEDV----FINGDGETSRDFCY 237
Query: 309 VNDLVDAHVKALERAQPKKVGIYNVGTGKGRSVKEFVEACKKATSAN-IKVIYEPR---- 363
++++V ++ A A K +YNV G ++ + A K + +AN I V P
Sbjct: 238 IDNVVQMNILAATAASEAKNEVYNVAVGDRTTLNDLYFAIKDSLNANGINVNQNPNYRDF 297
Query: 364 RPGDYAEVYSDPTKIRLELNWTAKYTN-LQESLEIAWRWQK 403
R GD +D +K L + +YT+ + E + A W K
Sbjct: 298 RAGDVRHSQADVSKAVTRLGY--QYTHKILEGISEAMPWYK 336
>UNIPROTKB|F1RP60 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050662 "coenzyme binding" evidence=IEA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 KO:K01710
PANTHER:PTHR10366:SF41 OMA:GFIASHM EMBL:CU986273
RefSeq:XP_003131096.2 Ensembl:ENSSSCT00000010407 GeneID:100517301
KEGG:ssc:100517301 Uniprot:F1RP60
Length = 355
Score = 215 (80.7 bits), Expect = 3.1e-19, Sum P(2) = 3.1e-19
Identities = 60/183 (32%), Positives = 89/183 (48%)
Query: 73 VLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYAD 130
VLVTGGAG+I SH + L++D +Y + +D L ++K L E + +FI D
Sbjct: 20 VLVTGGAGFIASHVIVSLVEDYPNYMIVNLDKLDY--CASLKNL-ETISDKQNYKFIQGD 76
Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKY-YHNITSNTLVVLESMARHGVD 189
+ D+ V F D V+HFAA +V S + ++ Y N+ T V+L + V+
Sbjct: 77 ICDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYG-THVLLSAAHEARVE 135
Query: 190 TLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFN 249
IY ST YG E +P+ P NPY +K AE + + + V+I R N
Sbjct: 136 KFIYVSTDEVYGGSLDKEFDESSPKQPTNPYASSKAAAECFVQSYWERYKFPVVITRSSN 195
Query: 250 VIG 252
V G
Sbjct: 196 VYG 198
Score = 72 (30.4 bits), Expect = 3.1e-19, Sum P(2) = 3.1e-19
Identities = 29/113 (25%), Positives = 50/113 (44%)
Query: 300 GTCVRDYIDVNDLVDAHVKALERAQPKKVGIYNVGTGKGRSV----KEFVEACKKATSAN 355
G R+++ D+V+A + L++ +P + IYN+GT SV KE ++ K+ S +
Sbjct: 226 GLQTRNFLYATDVVEAFLTVLKKGKPGE--IYNIGTNFEMSVLQLAKELIQLIKETKSES 283
Query: 356 IK---VIYEPRRPGDYAEVYSDPTKIRLELNWTAKYTNLQESLEIAWRWQKSH 405
V Y RP + KI L W K +E ++ W + +
Sbjct: 284 EMENWVDYVNDRPTNDMRYPMKSEKIH-GLGWRPKVP-WKEGIKKTIEWYREN 334
>MGI|MGI:1923605 [details] [associations]
symbol:Tgds "TDP-glucose 4,6-dehydratase" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0016829 "lyase activity" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 MGI:MGI:1923605 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 GeneTree:ENSGT00530000063128
GO:GO:0008460 eggNOG:COG1088 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 OMA:GFIASHM CTD:23483 HOVERGEN:HBG007741
OrthoDB:EOG4PVP08 EMBL:AK154341 EMBL:BC021419 IPI:IPI00405383
RefSeq:NP_083854.3 UniGene:Mm.251537 ProteinModelPortal:Q8VDR7
SMR:Q8VDR7 STRING:Q8VDR7 PhosphoSite:Q8VDR7 PRIDE:Q8VDR7
Ensembl:ENSMUST00000022727 GeneID:76355 KEGG:mmu:76355
InParanoid:Q3U4A6 NextBio:344957 Bgee:Q8VDR7 CleanEx:MM_TGDS
Genevestigator:Q8VDR7 GermOnline:ENSMUSG00000022130 Uniprot:Q8VDR7
Length = 355
Score = 215 (80.7 bits), Expect = 3.1e-19, Sum P(2) = 3.1e-19
Identities = 61/183 (33%), Positives = 91/183 (49%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGR--LQFIYAD 130
VLVTGGAG+I SH + L++D Y ++ NL + + A L+ L P + +FI D
Sbjct: 20 VLVTGGAGFIASHVIVSLVED-YPDYMIVNLDKLDYCAS--LKNLEPVSNKQNYKFIQGD 76
Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKY-YHNITSNTLVVLESMARHGVD 189
+ D+ V F D V+HFAA +V S + ++ Y N+ T V++ + GV+
Sbjct: 77 ICDSHFVKLLFEVEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYG-THVLVNAAYEAGVE 135
Query: 190 TLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFN 249
IY ST YG E +P+ P NPY +K AE + + + V+I R N
Sbjct: 136 KFIYVSTDEVYGGSLDQEFDESSPKQPTNPYASSKAAAECFVQSYWERYKFPVVITRSSN 195
Query: 250 VIG 252
V G
Sbjct: 196 VYG 198
Score = 72 (30.4 bits), Expect = 3.1e-19, Sum P(2) = 3.1e-19
Identities = 28/109 (25%), Positives = 48/109 (44%)
Query: 304 RDYIDVNDLVDAHVKALERAQPKKVGIYNVGTGKGRSV----KEFVEACKKATSANIK-- 357
R+++ D+V+A + L + +P + IYN+GT SV KE ++ K+ S +
Sbjct: 230 RNFLYAADVVEAFLTVLTKGEPGE--IYNIGTNFEMSVVQLAKELIQLIKETNSESETES 287
Query: 358 -VIYEPRRPGDYAEVYSDPTKIRLELNWTAKYTNLQESLEIAWRWQKSH 405
V Y RP + KI L W K +E ++ W + +
Sbjct: 288 WVDYVSDRPHNDMRYPMKSEKIH-SLGWKPKVP-WEEGIKKTVEWYRKN 334
>TAIR|locus:2118711 [details] [associations]
symbol:GAE1 "UDP-D-glucuronate 4-epimerase 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM;IDA]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=IDA] [GO:0005768 "endosome" evidence=IDA] [GO:0005802
"trans-Golgi network" evidence=IDA] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0016021 GO:GO:0005794 EMBL:CP002687 GenomeReviews:CT486007_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005975 GO:GO:0005768 GO:GO:0032580 GO:GO:0044237
GO:GO:0005802 EMBL:AL161577 EMBL:AY661562 EMBL:AY056303
EMBL:AY099855 EMBL:BT000308 EMBL:AY085505 IPI:IPI00530645
PIR:A85356 RefSeq:NP_194773.1 UniGene:At.20969 UniGene:At.67043
HSSP:P04397 ProteinModelPortal:Q9M0B6 SMR:Q9M0B6 STRING:Q9M0B6
PaxDb:Q9M0B6 PRIDE:Q9M0B6 EnsemblPlants:AT4G30440.1 GeneID:829167
KEGG:ath:AT4G30440 TAIR:At4g30440 HOGENOM:HOG000168000
InParanoid:Q9M0B6 KO:K08679 OMA:DELMSET PhylomeDB:Q9M0B6
ProtClustDB:CLSN2679288 Genevestigator:Q9M0B6 GO:GO:0050378
Uniprot:Q9M0B6
Length = 429
Score = 248 (92.4 bits), Expect = 5.9e-19, P = 5.9e-19
Identities = 99/358 (27%), Positives = 161/358 (44%)
Query: 66 HEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVK-VLQELFPEPGRL 124
H G VLVTG G++GSH +L L K V +DN + ++K + L G +
Sbjct: 83 HRSGGISVLVTGATGFVGSHVSLALRKRGDGVVGLDNFNNYYDPSLKRARRSLLSSRG-I 141
Query: 125 QFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLE-SM 183
+ DL DAK + K F AF VMH AA A V + +P Y H+ + + +LE
Sbjct: 142 FVVEGDLNDAKLLAKLFDVVAFTHVMHLAAQAGVRYALENPQSYVHSNIAGLVNLLEICK 201
Query: 184 ARHGVDTLIYSSTCATYGEPEKMPITE-ETPQAPINPYGKAKKMAEDIILDFSKNSDMAV 242
A + ++++S+ + YG EK+P +E + P + Y KK E+I ++ +A+
Sbjct: 202 AANPQPAIVWASSSSVYGLNEKVPFSESDRTDQPASLYAATKKAGEEITHTYNHIYGLAI 261
Query: 243 MILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGT- 301
LR+F V G P GR P++ A F R I+ G + T Y +
Sbjct: 262 TGLRFFTVYG--PWGR------PDM--------AYFSFTRNILQGKPI--TIYRGKNRVD 303
Query: 302 CVRDYIDVNDLVDAHVKALERAQP------KKVG-----IYNVGTGKGRSVKEFVEACKK 350
RD+ ++D+V + +L+ + KK G I+N+G +V V+ +K
Sbjct: 304 LARDFTYIDDIVKGCLGSLDSSGKSTGSGGKKRGAAPYRIFNLGNTSPVTVPILVDILEK 363
Query: 351 ATSANIKVIY-EPRRPGDYAEVYSDPTKIRLELNWTAKYTNLQESLEIAWRWQKSHRG 407
K + E GD +++ + R E + T+L+ L+ RW S+ G
Sbjct: 364 HLKVKAKRNFVEMPGNGDVPFTHANISSARNEFGYKPT-TDLETGLKKFVRWYLSYYG 420
>TIGR_CMR|CJE_1513 [details] [associations]
symbol:CJE_1513 "NAD-dependent epimerase/dehydratase
family protein" species:195099 "Campylobacter jejuni RM1221"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 EMBL:CP000025 GenomeReviews:CP000025_GR
HOGENOM:HOG000167994 GO:GO:0008460 PANTHER:PTHR10366:SF41
RefSeq:YP_179498.1 ProteinModelPortal:Q5HT87 STRING:Q5HT87
GeneID:3232144 KEGG:cjr:CJE1513 PATRIC:20044818 OMA:EVFRLCC
ProtClustDB:CLSK864552 BioCyc:CJEJ195099:GJC0-1541-MONOMER
Uniprot:Q5HT87
Length = 323
Score = 191 (72.3 bits), Expect = 7.0e-19, Sum P(2) = 7.0e-19
Identities = 54/188 (28%), Positives = 90/188 (47%)
Query: 72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNI-GAVKVLQELFPEPGRLQFIYAD 130
++LVTG G+IGSH L+K ++V + + N G + E P ++ + D
Sbjct: 3 NILVTGADGFIGSHLCESLVKKGFKVRALSQYNSFNFWGHL----EKSPFLKDMEVVSGD 58
Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT 190
L D+ K ++N DA+ H A+ + S P Y + TL +LE+ ++ +
Sbjct: 59 LRDSFFCEKI-TKN-IDAIFHLGALIAIPYSYTAPQSYVDTNVNGTLNMLEAAKKNEISH 116
Query: 191 LIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNV 250
I++ST YG +PI E+ P P +PY +K A+ + L + + ++ V I R FN
Sbjct: 117 FIHTSTSEVYGTAFYVPIDEKHPLQPQSPYSASKIAADMMALSYYNSFNLNVNIARPFNT 176
Query: 251 IGSDPEGR 258
G R
Sbjct: 177 YGPRQSAR 184
Score = 95 (38.5 bits), Expect = 7.0e-19, Sum P(2) = 7.0e-19
Identities = 29/110 (26%), Positives = 56/110 (50%)
Query: 308 DVNDLVDAHVKALERAQPKKVG-IYNVGTGKGRSVKEFVEACKKATSANIKVIYEPRR-- 364
D+N ++D + K G +YN+G+G S++E + +K + +K+I + +R
Sbjct: 211 DLNFVLDTCEGFISLLNLKHFGEVYNIGSGVEYSMQEVLNLIQKILDSKVKIIQDEQRLR 270
Query: 365 PGDYAEVYS---DPTKIRLELNWTAKYTNLQESLEIAWRWQKSHRGGYAS 411
P + +EV+ D K++ NW +K + L+E L + + K + Y S
Sbjct: 271 PKN-SEVFRLCCDANKLKKATNWQSKIS-LEEGLRQSIEYFKENLENYKS 318
>RGD|1306544 [details] [associations]
symbol:Tgds "TDP-glucose 4,6-dehydratase" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 RGD:1306544
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0008460 PANTHER:PTHR10366:SF41 OMA:GFIASHM IPI:IPI00373689
Ensembl:ENSRNOT00000012925 UCSC:RGD:1306544 Uniprot:F1M7R7
Length = 355
Score = 213 (80.0 bits), Expect = 7.3e-19, Sum P(2) = 7.3e-19
Identities = 60/183 (32%), Positives = 91/183 (49%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGR--LQFIYAD 130
VLVTGGAG+I SH + L++D Y ++ NL + + A L+ L P + +FI D
Sbjct: 20 VLVTGGAGFIASHVIVSLVED-YPNYMIINLDKLDYCAS--LKNLEPVSNKQNYKFIQGD 76
Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKY-YHNITSNTLVVLESMARHGVD 189
+ D+ V + F D V+HFAA +V S + ++ Y N+ T V++ + V+
Sbjct: 77 ICDSHFVKRLFESEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYG-THVLVNTAYEARVE 135
Query: 190 TLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFN 249
IY ST YG E +P+ P NPY +K AE + + + V+I R N
Sbjct: 136 KFIYVSTDEVYGGSLDQEFDESSPKQPTNPYASSKAAAECFVQSYWERYKFPVVITRSSN 195
Query: 250 VIG 252
V G
Sbjct: 196 VYG 198
Score = 71 (30.1 bits), Expect = 7.3e-19, Sum P(2) = 7.3e-19
Identities = 28/109 (25%), Positives = 48/109 (44%)
Query: 304 RDYIDVNDLVDAHVKALERAQPKKVGIYNVGTGKGRSV----KEFVEACKKATSANIK-- 357
R+++ D+V+A + L + +P + IYN+GT SV KE ++ K+ S +
Sbjct: 230 RNFLYAADVVEAFLTVLTKGEPGE--IYNIGTNFEMSVVQLAKELIQLIKETNSDSETER 287
Query: 358 -VIYEPRRPGDYAEVYSDPTKIRLELNWTAKYTNLQESLEIAWRWQKSH 405
V Y RP + KI L W K +E ++ W + +
Sbjct: 288 WVDYVSDRPHNDMRYPMKSEKIH-SLGWKPKVP-WEEGIKKTVEWYREN 334
>TAIR|locus:2024902 [details] [associations]
symbol:MUM4 "MUCILAGE-MODIFIED 4" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0008152 "metabolic process" evidence=ISS] [GO:0008831
"dTDP-4-dehydrorhamnose reductase activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0010192 "mucilage
biosynthetic process" evidence=IMP] [GO:0010214 "seed coat
development" evidence=IMP] [GO:0010280 "UDP-L-rhamnose synthase
activity" evidence=ISS;IDA] [GO:0010253 "UDP-rhamnose biosynthetic
process" evidence=IDA] [GO:0010489
"UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity" evidence=TAS]
[GO:0010490 "UDP-4-keto-rhamnose-4-keto-reductase activity"
evidence=TAS] [GO:0050377 "UDP-glucose 4,6-dehydratase activity"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR001509 InterPro:IPR005888 InterPro:IPR005913
Pfam:PF01370 Pfam:PF04321 InterPro:IPR016040 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0010214 EMBL:AC018748
EMBL:AC024260 GO:GO:0010192 GO:GO:0008831 GO:GO:0045226
HOGENOM:HOG000167988 KO:K12450 ProtClustDB:PLN02260 GO:GO:0008460
GO:GO:0050377 GO:GO:0010280 GO:GO:0010253 TIGRFAMs:TIGR01181
EMBL:AJ565874 EMBL:AY328518 IPI:IPI00522138 PIR:B96575
RefSeq:NP_564633.2 UniGene:At.20215 ProteinModelPortal:Q9LPG6
SMR:Q9LPG6 STRING:Q9LPG6 PaxDb:Q9LPG6 PRIDE:Q9LPG6
EnsemblPlants:AT1G53500.1 GeneID:841785 KEGG:ath:AT1G53500
TAIR:At1g53500 eggNOG:COG1088 InParanoid:Q9LPG6 OMA:CESHKPE
PhylomeDB:Q9LPG6 BioCyc:MetaCyc:AT1G53500-MONOMER
Genevestigator:Q9LPG6 GermOnline:AT1G53500 GO:GO:0010489
GO:GO:0010490 Uniprot:Q9LPG6
Length = 667
Score = 203 (76.5 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 58/193 (30%), Positives = 93/193 (48%)
Query: 72 HVLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYA 129
++L+TG AG+I SH A RL+++ Y++ ++D L +K L F P +F+
Sbjct: 10 NILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDY--CSDLKNLDPSFSSPN-FKFVKG 66
Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-V 188
D+ VN D +MHFAA +V S + ++ N T V+LE+ G +
Sbjct: 67 DIASDDLVNYLLITENIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQI 126
Query: 189 DTLIYSSTCATYGEPEKMPIT--EETPQA-PINPYGKAKKMAEDIILDFSKNSDMAVMIL 245
I+ ST YGE ++ E Q P NPY K AE +++ + ++ + V+
Sbjct: 127 RRFIHVSTDEVYGETDEDAAVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 186
Query: 246 RYFNVIGSD--PE 256
R NV G + PE
Sbjct: 187 RGNNVYGPNQFPE 199
Score = 94 (38.1 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 30/108 (27%), Positives = 54/108 (50%)
Query: 299 DGTCVRDYIDVNDLVDAHVKALERAQPKKVG-IYNVGTGKGRSVKEFV-EACK---KATS 353
DG+ VR Y+ D+ +A L + + +G +YNVGT + R V + + CK K
Sbjct: 220 DGSNVRSYLYCEDVAEAFEVVLHKGE---IGHVYNVGTKRERRVIDVARDICKLFGKDPE 276
Query: 354 ANIKVIYEPRRPGDYAEVYSDPTKIRLELNWTAKYTNLQESLEIAWRW 401
++I+ + RP + + D K++ +L W + TN ++ L+ W
Sbjct: 277 SSIQFV--ENRPFNDQRYFLDDQKLK-KLGWQER-TNWEDGLKKTMDW 320
>TAIR|locus:2050921 [details] [associations]
symbol:GAE4 "UDP-D-glucuronate 4-epimerase 4"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370
PRINTS:PR01713 InterPro:IPR016040 GO:GO:0016021 EMBL:CP002685
GenomeReviews:CT485783_GR eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975 GO:GO:0032580
GO:GO:0044237 EMBL:AC002387 HOGENOM:HOG000168000 KO:K08679
ProtClustDB:CLSN2679288 GO:GO:0050378 HSSP:Q14376 EMBL:AY594693
EMBL:BT005652 EMBL:BT004225 IPI:IPI00535089 PIR:A84889
RefSeq:NP_182056.1 UniGene:At.66419 ProteinModelPortal:O22141
SMR:O22141 STRING:O22141 PaxDb:O22141 PRIDE:O22141
EnsemblPlants:AT2G45310.1 GeneID:819139 KEGG:ath:AT2G45310
TAIR:At2g45310 InParanoid:O22141 OMA:IFESANH PhylomeDB:O22141
BioCyc:MetaCyc:AT2G45310-MONOMER Genevestigator:O22141
Uniprot:O22141
Length = 437
Score = 245 (91.3 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 95/358 (26%), Positives = 166/358 (46%)
Query: 69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIY 128
G+T VLVTG AG++G+H + L + V +DN + ++K + E + +
Sbjct: 96 GIT-VLVTGAAGFVGTHVSAALKRRGDGVIGLDNFNDYYDPSLKRARRALLERSGIFIVE 154
Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH-NITS--NTLVVLESMAR 185
D+ D + + K F +F VMH AA A V + +P Y H NI N L + +S+
Sbjct: 155 GDINDVELLRKLFKIVSFTHVMHLAAQAGVRYAMENPSSYVHSNIAGFVNLLEICKSV-- 212
Query: 186 HGVDTLIYSSTCATYGEPEKMPITEE--TPQAPINPYGKAKKMAEDIILDFSKNSDMAVM 243
+ ++++S+ + YG K+P +E+ T Q P + Y KK E+I ++ +++
Sbjct: 213 NPQPAIVWASSSSVYGLNTKVPFSEKDKTDQ-PASLYAATKKAGEEIAHTYNHIYGLSLT 271
Query: 244 ILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCV 303
LR+F V G P GR P++ A F + I+ G + + S GT
Sbjct: 272 GLRFFTVYG--PWGR------PDM--------AYFFFTKDILKGKSISIFE-SANHGTVA 314
Query: 304 RDYIDVNDLVDAHVKALERAQ-----------PKKVGIYNVGTGKGRSVKEFVEACKKAT 352
RD+ ++D+V + AL+ A+ P ++ ++N+G V + V ++
Sbjct: 315 RDFTYIDDIVKGCLAALDTAEKSTGSGGKKRGPAQLRVFNLGNTSPVPVSDLVRILERQL 374
Query: 353 SANIK--VIYEPRRPGDYAEVYSDPTKIRLELNWTAKYTNLQESLEIAWRWQKSHRGG 408
K +I PR GD +++ + + EL + T+LQ L+ RW S+ G
Sbjct: 375 KVKAKKNLIKMPRN-GDVPFTHANISLAQRELGYKPT-TDLQTGLKKFVRWYLSYYSG 430
>UNIPROTKB|A6QLW2 [details] [associations]
symbol:TGDS "dTDP-D-glucose 4,6-dehydratase" species:9913
"Bos taurus" [GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 eggNOG:COG1088
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
EMBL:BC148106 IPI:IPI00704940 RefSeq:NP_001094629.1
UniGene:Bt.41863 ProteinModelPortal:A6QLW2 STRING:A6QLW2
Ensembl:ENSBTAT00000006984 GeneID:534594 KEGG:bta:534594 CTD:23483
HOVERGEN:HBG007741 InParanoid:A6QLW2 OrthoDB:EOG4PVP08
NextBio:20876459 Uniprot:A6QLW2
Length = 355
Score = 208 (78.3 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 59/183 (32%), Positives = 88/183 (48%)
Query: 73 VLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYAD 130
VLVTGGAG+I SH + L++D +Y + +D L ++K L E +FI D
Sbjct: 20 VLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLDY--CASLKNL-ETISNKQNYKFIQGD 76
Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKY-YHNITSNTLVVLESMARHGVD 189
+ D+ V F D V+HFAA +V S + ++ Y N+ T V++ + V+
Sbjct: 77 ICDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYG-THVLVSAAHEARVE 135
Query: 190 TLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFN 249
IY ST YG E +P+ P NPY +K AE + + + V+I R N
Sbjct: 136 KFIYVSTDEVYGGSLDKEFDESSPKQPTNPYASSKAAAECFVQSYWEQYKFPVVITRSSN 195
Query: 250 VIG 252
V G
Sbjct: 196 VYG 198
Score = 74 (31.1 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 29/113 (25%), Positives = 50/113 (44%)
Query: 300 GTCVRDYIDVNDLVDAHVKALERAQPKKVGIYNVGTGKGRSV----KEFVEACKKATSAN 355
G R+++ D+V+A + L++ +P + IYN+GT SV KE ++ K+ S +
Sbjct: 226 GLQTRNFLYATDVVEAFLTVLKKGKPGE--IYNIGTNFEMSVLQLAKELIQLIKETNSES 283
Query: 356 IK---VIYEPRRPGDYAEVYSDPTKIRLELNWTAKYTNLQESLEIAWRWQKSH 405
V Y RP + KI L W K +E ++ W + +
Sbjct: 284 EMENWVDYVDDRPTNDMRYPMKSEKIH-GLGWRPKVP-WKEGIKKTIEWYREN 334
>UNIPROTKB|O95455 [details] [associations]
symbol:TGDS "dTDP-D-glucose 4,6-dehydratase" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AL359708 GO:GO:0008460 eggNOG:COG1088
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
CTD:23483 HOVERGEN:HBG007741 OrthoDB:EOG4PVP08 EMBL:AJ006068
EMBL:AF048686 EMBL:AL139318 EMBL:BC033675 IPI:IPI00003774
RefSeq:NP_055120.1 UniGene:Hs.12393 ProteinModelPortal:O95455
SMR:O95455 IntAct:O95455 MINT:MINT-4773441 STRING:O95455
PhosphoSite:O95455 PRIDE:O95455 DNASU:23483 Ensembl:ENST00000261296
GeneID:23483 KEGG:hsa:23483 UCSC:uc001vlw.3 GeneCards:GC13M095226
HGNC:HGNC:20324 HPA:HPA039927 HPA:HPA040857 neXtProt:NX_O95455
PharmGKB:PA128395791 InParanoid:O95455 PhylomeDB:O95455
GenomeRNAi:23483 NextBio:45843 ArrayExpress:O95455 Bgee:O95455
CleanEx:HS_TGDS Genevestigator:O95455 GermOnline:ENSG00000088451
Uniprot:O95455
Length = 350
Score = 208 (78.3 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 59/183 (32%), Positives = 88/183 (48%)
Query: 73 VLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYAD 130
VLVTGGAG+I SH + L++D +Y + +D L ++K L E +FI D
Sbjct: 20 VLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLDY--CASLKNL-ETISNKQNYKFIQGD 76
Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKY-YHNITSNTLVVLESMARHGVD 189
+ D+ V F D V+HFAA +V S + ++ Y N+ T V++ + V+
Sbjct: 77 ICDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYG-THVLVSAAHEARVE 135
Query: 190 TLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFN 249
IY ST YG E +P+ P NPY +K AE + + + V+I R N
Sbjct: 136 KFIYVSTDEVYGGSLDKEFDESSPKQPTNPYASSKAAAECFVQSYWEQYKFPVVITRSSN 195
Query: 250 VIG 252
V G
Sbjct: 196 VYG 198
Score = 73 (30.8 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 29/113 (25%), Positives = 50/113 (44%)
Query: 300 GTCVRDYIDVNDLVDAHVKALERAQPKKVGIYNVGTGKGRSV----KEFVEACKKATSAN 355
G R+++ D+V+A + L++ +P + IYN+GT SV KE ++ K+ S +
Sbjct: 226 GLQTRNFLYATDVVEAFLTVLKKGKPGE--IYNIGTNFEMSVVQLAKELIQLIKETNSES 283
Query: 356 IK---VIYEPRRPGDYAEVYSDPTKIRLELNWTAKYTNLQESLEIAWRWQKSH 405
V Y RP + KI L W K +E ++ W + +
Sbjct: 284 EMENWVDYVNDRPTNDMRYPMKSEKIH-GLGWRPKVP-WKEGIKKTIEWYREN 334
>UNIPROTKB|F1P029 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 PANTHER:PTHR10366:SF41
OMA:GFIASHM EMBL:AADN02029320 IPI:IPI00594682
Ensembl:ENSGALT00000027315 Uniprot:F1P029
Length = 365
Score = 210 (79.0 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
Identities = 55/181 (30%), Positives = 87/181 (48%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
+LVTGGAG+I SH + L+++ Y ++ NL + + A E E +FI D+
Sbjct: 25 LLVTGGAGFIASHVVVSLVRN-YPNYLIINLDKLDYCASLKNLETVSEKENYKFIQGDIC 83
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKY-YHNITSNTLVVLESMARHGVDTL 191
+ + + F D V+HFAA +V S L++ Y N+ T V++ + V+
Sbjct: 84 EPHFIKQLFETEKIDIVLHFAAQTHVDLSFWHALEFTYVNVYG-TNVLVAAAHEANVEKF 142
Query: 192 IYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVI 251
+Y ST YG E +P+ P NPY +K AE + + + V+I R NV
Sbjct: 143 VYVSTDEVYGGSTDQEFDESSPKCPTNPYASSKAAAECFVQSYWERYQFPVVITRSSNVY 202
Query: 252 G 252
G
Sbjct: 203 G 203
Score = 72 (30.4 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
Identities = 27/109 (24%), Positives = 48/109 (44%)
Query: 304 RDYIDVNDLVDAHVKALERAQPKKVGIYNVGTGKGRSV----KEFVEACKKATSANIK-- 357
R+++ D+V+A + L+ +P + IYN+GT S+ KE + KK +S +
Sbjct: 235 RNFLYATDVVEAFLTVLKEGKPGE--IYNIGTNFEMSIVQLAKELIHLIKKTSSESEMEH 292
Query: 358 -VIYEPRRPGDYAEVYSDPTKIRLELNWTAKYTNLQESLEIAWRWQKSH 405
+ Y RP + K+ L W K +E ++ W K +
Sbjct: 293 WMDYVKDRPTNDLRYPMSSEKMH-NLGWRPKVP-WKEGIKKTIEWYKEN 339
>TAIR|locus:2099372 [details] [associations]
symbol:RHM3 "rhamnose biosynthesis 3" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=ISS] [GO:0009507 "chloroplast" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0010280
"UDP-L-rhamnose synthase activity" evidence=ISS;IDA] [GO:0010253
"UDP-rhamnose biosynthetic process" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR001509 InterPro:IPR005913 Pfam:PF01370 Pfam:PF04321
InterPro:IPR016040 GO:GO:0005829 GO:GO:0009506 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0016829 EMBL:AP002061 GO:GO:0008831
GO:GO:0045226 HOGENOM:HOG000167988 KO:K12450 ProtClustDB:PLN02260
GO:GO:0010280 GO:GO:0010253 eggNOG:COG1088 EMBL:AY078958
EMBL:AY142060 IPI:IPI00525100 RefSeq:NP_188097.1 UniGene:At.27812
ProteinModelPortal:Q9LH76 SMR:Q9LH76 IntAct:Q9LH76 STRING:Q9LH76
PaxDb:Q9LH76 PRIDE:Q9LH76 EnsemblPlants:AT3G14790.1 GeneID:820707
KEGG:ath:AT3G14790 TAIR:At3g14790 InParanoid:Q9LH76 OMA:TARMNNI
PhylomeDB:Q9LH76 Genevestigator:Q9LH76 GermOnline:AT3G14790
Uniprot:Q9LH76
Length = 664
Score = 199 (75.1 bits), Expect = 2.4e-18, Sum P(2) = 2.4e-18
Identities = 59/193 (30%), Positives = 92/193 (47%)
Query: 72 HVLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYA 129
++L+TG AG+I SH A RL++ Y++ ++D L +K L P +F+
Sbjct: 8 NILITGAAGFIASHVANRLVRSYPDYKIVVLDKLDY--CSNLKNLNPSKSSPN-FKFVKG 64
Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-V 188
D+ A VN D +MHFAA +V S + ++ N T V+LE+ G +
Sbjct: 65 DIASADLVNYLLITEEIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQI 124
Query: 189 DTLIYSSTCATYGEP-EKMPI-TEETPQA-PINPYGKAKKMAEDIILDFSKNSDMAVMIL 245
I+ ST YGE E + E Q P NPY K AE +++ + ++ + V+
Sbjct: 125 RRFIHVSTDEVYGETDEDASVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 184
Query: 246 RYFNVIGSD--PE 256
R NV G + PE
Sbjct: 185 RGNNVYGPNQFPE 197
Score = 96 (38.9 bits), Expect = 2.4e-18, Sum P(2) = 2.4e-18
Identities = 28/105 (26%), Positives = 46/105 (43%)
Query: 299 DGTCVRDYIDVNDLVDAHVKALERAQPKKVGIYNVGTGKGRSVKEFVEACKK--ATSANI 356
DG+ VR Y+ D+ +A L + + V YN+GT + R V + K +
Sbjct: 218 DGSNVRSYLYCEDVAEAFEVVLHKGEVNHV--YNIGTTRERRVIDVANDISKLFGIDPDS 275
Query: 357 KVIYEPRRPGDYAEVYSDPTKIRLELNWTAKYTNLQESLEIAWRW 401
+ Y RP + + D K++ +L W + TN +E L W
Sbjct: 276 TIQYVENRPFNDQRYFLDDQKLK-KLGWCER-TNWEEGLRKTMEW 318
>TIGR_CMR|GSU_2241 [details] [associations]
symbol:GSU_2241 "capsular polysaccharide biosynthesis
protein I" species:243231 "Geobacter sulfurreducens PCA"
[GO:0000271 "polysaccharide biosynthetic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0044237 GO:GO:0016857
HOGENOM:HOG000168000 KO:K08679 OMA:NTAMPFS RefSeq:NP_953290.1
ProteinModelPortal:Q74AV9 GeneID:2687517 KEGG:gsu:GSU2241
PATRIC:22027337 ProtClustDB:CLSK746800
BioCyc:GSUL243231:GH27-2213-MONOMER Uniprot:Q74AV9
Length = 336
Score = 236 (88.1 bits), Expect = 2.5e-18, P = 2.5e-18
Identities = 93/353 (26%), Positives = 152/353 (43%)
Query: 70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKV--LQELFPEPGRLQFI 127
++ +LVTG AG+IG H RLL RV +DNL+ +K+ L++L G F+
Sbjct: 1 MSSILVTGAAGFIGFHLTKRLLDRGDRVVGLDNLNDYYDVNLKLDRLRQLEGREG-FSFV 59
Query: 128 YADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG 187
L D A+ F+ FD V++ AA A V S +P Y + + +LE HG
Sbjct: 60 RTSLADRPALEDLFAGQRFDVVVNLAAQAGVRYSITNPHAYVDSNLVGFINILEGCRHHG 119
Query: 188 VDTLIYSSTCATYGEPEKMPIT-EETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILR 246
V L+Y+S+ + YG MP + P++ Y KK E + +S + LR
Sbjct: 120 VKHLVYASSSSVYGANTAMPFSIHHNVDHPVSLYAATKKANELMAHTYSSLYGLPTTGLR 179
Query: 247 YFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTA--DGTCVR 304
+F V G P GR P++ A F + I+ G + ++ D T V
Sbjct: 180 FFTVYG--PWGR------PDM--------ALFLFTKAILEGRPIDVYNFGKMQRDFTYVD 223
Query: 305 DYID-VNDLVDAHVK---ALERAQPKK------VGIYNVGTGKGRSVKEFVEACKKATSA 354
D ++ V ++D + A A+P IYN+G + F+EA ++
Sbjct: 224 DIVEGVTRVMDRTPEPNPAWSGARPDPGTSYAPYRIYNIGNNNPVELLAFIEAIEQNLGI 283
Query: 355 NIKVIYEPRRPGDYAEVYSDPTKIRLELNWTAKYTNLQESLEIAWRWQKSHRG 407
+ P + GD Y+D + ++ + T + E +E W + + G
Sbjct: 284 TAQKNLLPLQAGDVPATYADVDDLMNDVGFKPA-TPIGEGIERFVEWYRGYYG 335
>TIGR_CMR|CBU_0844 [details] [associations]
symbol:CBU_0844 "capsular polysaccharide biosynthesis
protein I" species:227377 "Coxiella burnetii RSA 493" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] InterPro:IPR001509 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0044237 HOGENOM:HOG000168000
KO:K08679 OMA:NSAYSAN RefSeq:NP_819864.2 ProteinModelPortal:Q83D94
GeneID:1208737 KEGG:cbu:CBU_0844 PATRIC:17930385
ProtClustDB:CLSK914357 BioCyc:CBUR227377:GJ7S-839-MONOMER
GO:GO:0003974 Uniprot:Q83D94
Length = 339
Score = 235 (87.8 bits), Expect = 4.0e-18, P = 4.0e-18
Identities = 91/345 (26%), Positives = 148/345 (42%)
Query: 74 LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG---NIGAVKVLQ-ELFPEPGRLQFIYA 129
LVTG AG+IG H RLL + +DNL+ N+ ++ Q + FP F
Sbjct: 9 LVTGCAGFIGFHLTKRLLARGDHILGLDNLNDYYDVNLKEARLAQLKEFPH---FSFHKL 65
Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD 189
DL D + + F ++ FD V+H AA A V S +P Y + +LE V
Sbjct: 66 DLADRQGMTDLFQKHLFDTVVHLAAQAGVRYSLTNPYAYVDSNLVGFAHILEGCRHQSVK 125
Query: 190 TLIYSSTCATYGEPEKMPITE-ETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYF 248
L+++S+ + YG EK P +E + PI Y +KK E + ++ + LR+F
Sbjct: 126 HLVFASSSSVYGANEKYPFSESDNVDHPIALYAASKKANELMAHSYAHLFQLPCTGLRFF 185
Query: 249 NVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYS--TADGTCVRDY 306
V G P GR P++ A F R ++A + ++ + D T + D
Sbjct: 186 TVYG--PWGR------PDM--------ALFKFTRNLLADKPIDVYNHGKMSRDFTYIDDI 229
Query: 307 IDVNDLVDAHV----KALERAQPKKVG------IYNVGTGKGRSVKEFVEACKKATSANI 356
+D L H A QP IYN+G+ + F+ +K +
Sbjct: 230 VDGILLTLDHPPEPNSAYSANQPNPAKSNAPYRIYNIGSNNPILLTNFIAILEKTLNKKA 289
Query: 357 KVIYEPRRPGDYAEVYSDPTKIRLELNWTAKYTNLQESLEIAWRW 401
+ P +PGD E Y+D +++ + + + T LQ+ ++ W
Sbjct: 290 IKNFLPLQPGDVPETYADVSQLEKDFQYRPR-TPLQKGVKNFVEW 333
>TIGR_CMR|CBU_0829 [details] [associations]
symbol:CBU_0829 "NAD dependent epimerase/dehydratase
family protein" species:227377 "Coxiella burnetii RSA 493"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0044237 KO:K01784
HOGENOM:HOG000167994 RefSeq:NP_819849.2 ProteinModelPortal:Q83DA9
PRIDE:Q83DA9 GeneID:1208722 KEGG:cbu:CBU_0829 PATRIC:17930355
OMA:ANICAMK ProtClustDB:CLSK914342
BioCyc:CBUR227377:GJ7S-824-MONOMER Uniprot:Q83DA9
Length = 331
Score = 179 (68.1 bits), Expect = 6.9e-18, Sum P(2) = 6.9e-18
Identities = 56/180 (31%), Positives = 80/180 (44%)
Query: 74 LVTGGAGYIGSHAALRLLK-DSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
+V GGAG IGSH RLL+ D V I DN RG + Q L ++ I D+
Sbjct: 10 VVIGGAGLIGSHTVDRLLQEDVAEVIIYDNFVRGT--RENLAQALRDPRTKIYDIGGDIN 67
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
+N D V HFAA+ ++ + P + T VLE+ GV L+
Sbjct: 68 QTDILNTALK--GVDGVFHFAAL-WLLQCYEYPRSAFQTNIQGTFNVLETCVAQGVKRLV 124
Query: 193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIG 252
+SS+ + YG+ + P+TE P YG K E + + + + LRY NV G
Sbjct: 125 FSSSASVYGDALEEPMTEAHPFNSRTFYGATKIAGEAMATAYHHRYGLPFVGLRYMNVYG 184
Score = 101 (40.6 bits), Expect = 6.9e-18, Sum P(2) = 6.9e-18
Identities = 28/107 (26%), Positives = 50/107 (46%)
Query: 299 DGTCVRDYIDVNDLVDAHVKALERAQPKKVGIYNVGTGKGRSVKEFVEACKKATSANIKV 358
DG+ D++ V D A++ A++ + YNVGTGK S+ E + +K T + +
Sbjct: 215 DGSQAYDFVYVEDCAAANICAMKADTVDEY--YNVGTGKRTSILELAKEIQKITGTSDNI 272
Query: 359 IYEPRRPGDYAEVYSDPTKIRLELNWTAKYTNLQESLEIAWRWQKSH 405
+ P+ P K ++ + A+ L E L+ W++SH
Sbjct: 273 QFLPQGTTFVKNRIGCPKKAAEQIGFKAE-VGLTEGLQRLIEWRRSH 318
>UNIPROTKB|P29782 [details] [associations]
symbol:strE "dTDP-glucose 4,6-dehydratase" species:1911
"Streptomyces griseus" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0019872 "streptomycin biosynthetic
process" evidence=IGI] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 UniPathway:UPA00066
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 GO:GO:0019872 GO:GO:0045226 GO:GO:0008460
TIGRFAMs:TIGR01181 PANTHER:PTHR10366:SF41 EMBL:X62567 PIR:S18617
ProteinModelPortal:P29782 SMR:P29782 Uniprot:P29782
Length = 328
Score = 170 (64.9 bits), Expect = 9.8e-18, Sum P(2) = 9.8e-18
Identities = 57/186 (30%), Positives = 82/186 (44%)
Query: 71 THVLVTGGAGYIGSHAALRLL----KDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQF 126
TH+LVTG AG+IGS LL VT +D L+ G L + P R +F
Sbjct: 3 THLLVTGAAGFIGSQYVRTLLGPGGPPDVVVTALDALTYA--GNPDNLAAVRGHP-RYRF 59
Query: 127 IYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH 186
D+ DA + D V+H AA ++V S LD + T +L++ RH
Sbjct: 60 ERGDICDAPGRRVMAGQ---DQVVHLAAESHVDRSLLDASVFVRTNVHGTQTLLDAATRH 116
Query: 187 GVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILR 246
GV + + ST YG E TE+ P P +PY +K + + L + + V + R
Sbjct: 117 GVASFVQVSTDEVYGSLEHGSWTEDEPLRPNSPYSASKASGDLLALAHHVSHGLDVRVTR 176
Query: 247 YFNVIG 252
N G
Sbjct: 177 CSNNYG 182
Score = 110 (43.8 bits), Expect = 9.8e-18, Sum P(2) = 9.8e-18
Identities = 35/118 (29%), Positives = 56/118 (47%)
Query: 299 DGTCVRDYIDVNDLVDAHVKALERAQPK-KVG-IYNVGTGKGRSVKEFVEACKKATSANI 356
DG VR+++ V+D HV+ +E + + + G +YN+G G S KE V +A A+
Sbjct: 209 DGLNVREWLHVDD----HVRGIEAVRTRGRAGRVYNIGGGATLSNKELVGLLLEAAGADW 264
Query: 357 -KVIYEPRRPGDYAEVYSDPTKIRLELNWTAKYTNLQESLEIAWRWQKSHRGGYASII 413
V Y R G D T+I+ EL + A +L + L W HR + ++
Sbjct: 265 GSVEYVEDRKGHDRRYAVDSTRIQRELGF-APAVDLADGLAATVAWYHKHRSWWEPLV 321
>UNIPROTKB|E2QWQ8 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 KO:K01710
PANTHER:PTHR10366:SF41 OMA:GFIASHM CTD:23483 EMBL:AAEX03013308
RefSeq:XP_542640.3 Ensembl:ENSCAFT00000008577 GeneID:485521
KEGG:cfa:485521 Uniprot:E2QWQ8
Length = 355
Score = 197 (74.4 bits), Expect = 5.2e-17, Sum P(2) = 5.2e-17
Identities = 56/183 (30%), Positives = 87/183 (47%)
Query: 73 VLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYAD 130
+LVTGGAG+I SH + L++D +Y + +D L ++K L E +FI D
Sbjct: 20 LLVTGGAGFIASHVIVSLVEDYPNYMIINLDKLDY--CASLKNL-ETISNKQNYKFIQGD 76
Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKY-YHNITSNTLVVLESMARHGVD 189
+ ++ V F D V+HFAA +V S + ++ Y N+ T V++ + V+
Sbjct: 77 ICNSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYG-THVLVSAAHEARVE 135
Query: 190 TLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFN 249
IY ST YG E +P+ P NPY +K AE + + + +I R N
Sbjct: 136 KFIYVSTDEVYGGSLDKEFDESSPKQPTNPYASSKAAAECFVQSYWERYKFPAVITRSSN 195
Query: 250 VIG 252
V G
Sbjct: 196 VYG 198
Score = 73 (30.8 bits), Expect = 5.2e-17, Sum P(2) = 5.2e-17
Identities = 29/113 (25%), Positives = 52/113 (46%)
Query: 300 GTCVRDYIDVNDLVDAHVKALERAQPKKVGIYNVGTGKGRSV----KEFVEACKKATSAN 355
G R+++ D+V+A + L++ +P + IYN+GT SV KE ++ K+ +S +
Sbjct: 226 GLQTRNFLYATDVVEAFLTVLKKGKPGE--IYNIGTNFEMSVLQLAKELIQLIKETSSES 283
Query: 356 IK---VIYEPRRPGDYAEVYSDPTKIRLELNWTAKYTNLQESLEIAWRWQKSH 405
V Y RP + KI+ L W K +E ++ W + +
Sbjct: 284 EMETWVDYVNDRPTNDMRYPMKSEKIQ-GLGWRPKVP-WKEGIKKTIDWYREN 334
>TIGR_CMR|CJE_1287 [details] [associations]
symbol:CJE_1287 "ADP-L-glycero-D-mannoheptose-6-epimerase"
species:195099 "Campylobacter jejuni RM1221" [GO:0008712
"ADP-glyceromanno-heptose 6-epimerase activity" evidence=ISS]
[GO:0009244 "lipopolysaccharide core region biosynthetic process"
evidence=ISS] UniPathway:UPA00356 InterPro:IPR001509
InterPro:IPR011912 Pfam:PF01370 InterPro:IPR016040 eggNOG:COG0451
Gene3D:3.40.50.720 GO:GO:0005975 GO:GO:0050661 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0097171 HOGENOM:HOG000167987
KO:K03274 GO:GO:0008712 PANTHER:PTHR10366:SF29 TIGRFAMs:TIGR02197
RefSeq:YP_179275.1 ProteinModelPortal:Q5HTW0 STRING:Q5HTW0
GeneID:3231794 KEGG:cjr:CJE1287 PATRIC:20044370 OMA:GSYQFHT
ProtClustDB:CLSK871664 BioCyc:CJEJ195099:GJC0-1313-MONOMER
Uniprot:Q5HTW0
Length = 317
Score = 160 (61.4 bits), Expect = 6.6e-17, Sum P(2) = 6.6e-17
Identities = 67/251 (26%), Positives = 108/251 (43%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNL------SRGNIGAVKVLQELFPEPGRLQF 126
V +TGGAG+IGS AL L ++ + + I+D + GN+ + + L G L
Sbjct: 3 VAITGGAGFIGSQLALNL-QEKHEILIIDKMRSSATFENGNLQSFGHFKNLLEFDGEL-- 59
Query: 127 IYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH 186
D+ D K + K + + + H AA++ + D K + L +
Sbjct: 60 FAGDINDEKVLKKI-EDFKPEIIFHQAAIS--DTTVFDQTK----VLQTNLNTFKDFIEL 112
Query: 187 GVDT---LIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVM 243
+D LIY+S+ + YG+ K P T + P NPY +K M + + K D A +
Sbjct: 113 SIDLNAKLIYASSASVYGDA-KSPQTVGKDEEPKNPYAFSKLMMDKLA---KKYYDKAHL 168
Query: 244 I-LRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVK---GTDYSTAD 299
+ LRYFNV G GE + + + I+AG + G+D D
Sbjct: 169 VGLRYFNVYGK------GEFYK------NKTASMVLQFGHQILAGKNPRLFEGSDQIYRD 216
Query: 300 GTCVRDYIDVN 310
T ++D I+ N
Sbjct: 217 FTYIKDVINAN 227
Score = 113 (44.8 bits), Expect = 6.6e-17, Sum P(2) = 6.6e-17
Identities = 28/95 (29%), Positives = 54/95 (56%)
Query: 304 RDYIDVNDLVDAHVKALERAQPKKVGIYNVGTGKGRSVKEFVEACKKATSANIKVIYEPR 363
RD+ + D+++A++ AL+ K G+YNVG+GK R+ ++ V+ +K ++ Y P
Sbjct: 215 RDFTYIKDVINANLIALD----SKCGVYNVGSGKARTFQDIVDILQKELKTDLPCEYIPN 270
Query: 364 RPGDYAEVYSDPTKIRLELNWT--AKYTNLQESLE 396
P Y + Y T+ +L+ W K++ L+E ++
Sbjct: 271 -P--YVKSYQFHTEAKLDQTWDYQPKFS-LEEGIK 301
>TAIR|locus:2126846 [details] [associations]
symbol:GAE3 "UDP-D-glucuronate 4-epimerase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0016020 "membrane" evidence=TAS] [GO:0050378
"UDP-glucuronate 4-epimerase activity" evidence=ISS]
InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0016021 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0016020 eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975
GO:GO:0032580 GO:GO:0044237 EMBL:AL161471 EMBL:AF069299
HOGENOM:HOG000168000 KO:K08679 ProtClustDB:CLSN2679288
GO:GO:0050378 EMBL:BT026487 IPI:IPI00527699 PIR:T01339
RefSeq:NP_191922.1 UniGene:At.27610 HSSP:Q14376
ProteinModelPortal:O81312 SMR:O81312 STRING:O81312 PaxDb:O81312
PRIDE:O81312 EnsemblPlants:AT4G00110.1 GeneID:828145
KEGG:ath:AT4G00110 TAIR:At4g00110 InParanoid:O81312 OMA:KWWSRVL
PhylomeDB:O81312 Genevestigator:O81312 Uniprot:O81312
Length = 430
Score = 230 (86.0 bits), Expect = 8.9e-17, P = 8.9e-17
Identities = 91/352 (25%), Positives = 160/352 (45%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
VLVTG AG++G+H + L + V +DN + ++K ++ E + + D+
Sbjct: 93 VLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKRARQALLERSGVFVVEGDIN 152
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLE-SMARHGVDTL 191
DA + K F F VMH AA A V + +P Y H+ + + +LE + + +
Sbjct: 153 DAALLKKLFEVVPFTHVMHLAAQAGVRYAMENPSSYVHSNIAGFVNLLEVCKSANPQPAI 212
Query: 192 IYSSTCATYGEPEKMPITEE--TPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFN 249
+++S+ + YG K+P +E+ T Q P + Y KK E+I ++ +++ LR+F
Sbjct: 213 VWASSSSVYGLNTKVPFSEKDRTDQ-PASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFT 271
Query: 250 VIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRDYIDV 309
V G P GR P++ A F R I+ G + + GT RD+ +
Sbjct: 272 VYG--PWGR------PDM--------AYFFFTRDILKGKAISIFE-GVNHGTVARDFTYI 314
Query: 310 NDLVDAHVKALERAQP------KKVG-----IYNVGTGKGRSVKEFVEACKKATSANIK- 357
+D+V + AL+ A+ KK G ++N+G V + V ++ K
Sbjct: 315 DDIVKGCLGALDTAEKSTGSGGKKRGAAQLRVFNLGNTSPVPVTDLVTILERLLKVKAKR 374
Query: 358 -VIYEPRRPGDYAEVYSDPTKIRLELNWTAKYTNLQESLEIAWRWQKSHRGG 408
++ PR GD +++ + + EL + T+LQ L+ RW + G
Sbjct: 375 NIMKLPRN-GDVQFTHANISSAQRELGYKPT-TDLQTGLKKFARWYLGYYNG 424
>UNIPROTKB|A0QSK6 [details] [associations]
symbol:rmlB "dTDP-glucose 4,6-dehydratase" species:246196
"Mycobacterium smegmatis str. MC2 155" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=IGI] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=IGI]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000480 EMBL:CP001663
GenomeReviews:CP000480_GR GO:GO:0045226 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:YP_006566244.1 RefSeq:YP_885894.1 ProteinModelPortal:A0QSK6
SMR:A0QSK6 STRING:A0QSK6 EnsemblBacteria:EBMYCT00000041385
GeneID:13429291 GeneID:4531259 KEGG:msg:MSMEI_1476
KEGG:msm:MSMEG_1512 PATRIC:18075481 OMA:AYNDARY
BioCyc:MSME246196:GJ4Y-1512-MONOMER Uniprot:A0QSK6
Length = 331
Score = 205 (77.2 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 58/165 (35%), Positives = 88/165 (53%)
Query: 73 VLVTGGAGYIGS---HAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYA 129
+LVTGGAG+IG+ H ALR + S +T++D L+ G+ + L P R++ +
Sbjct: 3 LLVTGGAGFIGANFVHLALREARTS-SITVLDALTYA--GS---RESLAPVADRIRLVQG 56
Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD 189
D+ DA V +E+ DAV+HFAA +V + DP + H+ T +LE++ RH V
Sbjct: 57 DITDAALVGDLVAES--DAVVHFAAETHVDNALADPEPFLHSNVVGTYTILEAVRRHNV- 113
Query: 190 TLIYSSTCATYGEPE-KMP--ITEETPQAPINPYGKAKKMAEDII 231
L + ST YG+ E P E TP P +PY K A+ ++
Sbjct: 114 RLHHVSTDEVYGDLELDNPARFNETTPYNPSSPYSSTKAAADLLV 158
Score = 56 (24.8 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 26/109 (23%), Positives = 44/109 (40%)
Query: 300 GTCVRDYIDVNDLVDAHVKALERAQPK-KVG-IYNVGTGKGRSVKEFVEACKKATSANIK 357
G VRD+I V+D H A+ R +G Y +G R+ + K +
Sbjct: 207 GANVRDWIHVDD----HNSAVWRILTDGTIGRTYLIGAECERNNLTVMRTILKLMGRDPD 262
Query: 358 VI-YEPRRPGDYAEVYSDPTKIRLELNWTAKYTNLQESLEIAWRWQKSH 405
+ R G DP+ ++ EL W K+T+ + L W +++
Sbjct: 263 DFDHVTDRAGHDLRYAIDPSTLQDELGWAPKHTDFEAGLTDTIDWYRAN 311
>TAIR|locus:2139134 [details] [associations]
symbol:GAE5 "UDP-D-glucuronate 4-epimerase 5"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM;IDA]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=ISS] [GO:0016036 "cellular response to phosphate
starvation" evidence=RCA] [GO:0019375 "galactolipid biosynthetic
process" evidence=RCA] [GO:0042631 "cellular response to water
deprivation" evidence=RCA] [GO:0005768 "endosome" evidence=IDA]
[GO:0005802 "trans-Golgi network" evidence=IDA] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0016021 GO:GO:0005794 EMBL:CP002687 GenomeReviews:CT486007_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005975 GO:GO:0005768 GO:GO:0032580 GO:GO:0044237
GO:GO:0005802 EMBL:AL161533 EMBL:AL080318 HOGENOM:HOG000168000
KO:K08679 ProtClustDB:CLSN2679288 GO:GO:0050378 HSSP:Q14376
EMBL:AY050993 EMBL:AY150403 IPI:IPI00529597 PIR:T48135
RefSeq:NP_192962.1 UniGene:At.48849 UniGene:At.66589
ProteinModelPortal:Q9STI6 SMR:Q9STI6 STRING:Q9STI6 PRIDE:Q9STI6
EnsemblPlants:AT4G12250.1 GeneID:826833 KEGG:ath:AT4G12250
TAIR:At4g12250 InParanoid:Q9STI6 OMA:RAYRQQM PhylomeDB:Q9STI6
Genevestigator:Q9STI6 Uniprot:Q9STI6
Length = 436
Score = 227 (85.0 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 94/350 (26%), Positives = 165/350 (47%)
Query: 69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIY 128
G+T VLVTG +G++G+H ++ L + V +DN +R +K ++ E + +
Sbjct: 95 GLT-VLVTGASGFVGTHVSIALRRRGDGVLGLDNFNRYYDPKLKRARQGLLERSGVFVVE 153
Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLE-SMARHG 187
D+ DA + K F F VMH AA A V + +P Y ++ + + +LE S + +
Sbjct: 154 GDINDAVLLRKLFDVVLFTHVMHLAAQAGVRYAMQNPGSYVNSNIAGFVNLLEVSKSANP 213
Query: 188 VDTLIYSSTCATYGEPEKMPITEE--TPQAPINPYGKAKKMAEDIILDFSKNSDMAVMIL 245
++++S+ + YG K+P +E+ T Q P + Y KK E I ++ +++ L
Sbjct: 214 QPAIVWASSSSVYGLNSKVPFSEKDRTDQ-PASLYAATKKAGEGIAHTYNHIYGLSLTGL 272
Query: 246 RYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTAD-GTCVR 304
R+F V G P GR P++ A F + I+ G + T + + D G+ R
Sbjct: 273 RFFTVYG--PWGR------PDM--------AYFFFTKDILKGKTI--TVFESPDKGSVAR 314
Query: 305 DYIDVNDLVDAHVKALERAQP------KKVG-----IYNVGTGKGRSVKEFVEACKKATS 353
D+ ++D+V + AL+ A+ KK G IYN+G V + V +K
Sbjct: 315 DFTYIDDIVKGCLGALDTAEKSTGSGGKKKGPAMFRIYNLGNTSPVPVTKLVTILEKLLK 374
Query: 354 --ANIKVIYEPRRPGDYAEVYSDPTKIRLELNWTAKYTNLQESLEIAWRW 401
A K++ PR GD +++ T + EL + +L+ L+ +W
Sbjct: 375 MKAKKKIMPLPRN-GDVEFTHANITLAQAELGYKPA-VDLETGLKKFVKW 422
>UNIPROTKB|O06329 [details] [associations]
symbol:rmlB "dTDP-glucose 4,6-dehydratase" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IGI;IDA] [GO:0019305 "dTDP-rhamnose biosynthetic process"
evidence=IDA] [GO:0040007 "growth" evidence=IDA;IMP] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IGI]
[GO:0070404 "NADH binding" evidence=ISS] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 UniPathway:UPA00124
InterPro:IPR016040 GO:GO:0040007 GO:GO:0005618 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
Gene3D:3.40.50.720 EMBL:BX842583 GO:GO:0070404 GO:GO:0045226
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:AYNDARY
PIR:E70566 RefSeq:NP_217981.1 RefSeq:NP_338096.1
RefSeq:YP_006516953.1 HSSP:P95780 ProteinModelPortal:O06329
SMR:O06329 PRIDE:O06329 EnsemblBacteria:EBMYCT00000003518
EnsemblBacteria:EBMYCT00000071206 GeneID:13317071 GeneID:887332
GeneID:926625 KEGG:mtc:MT3570 KEGG:mtu:Rv3464 KEGG:mtv:RVBD_3464
PATRIC:18129579 TubercuList:Rv3464 ProtClustDB:CLSK792508
Uniprot:O06329
Length = 331
Score = 200 (75.5 bits), Expect = 2.5e-16, Sum P(2) = 2.5e-16
Identities = 57/165 (34%), Positives = 93/165 (56%)
Query: 73 VLVTGGAGYIGS---HAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYA 129
+LVTGGAG+IG+ H+A+R D VT++D L+ G + L ++ E ++ +
Sbjct: 3 LLVTGGAGFIGTNFVHSAVREHPDD-AVTVLDALTYA--GRRESLADV--EDA-IRLVQG 56
Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD 189
D+ DA+ V++ +E+ DAV+HFAA ++V + +P + H T +LE++ RHGV
Sbjct: 57 DITDAELVSQLVAES--DAVVHFAAESHVDNALDNPEPFLHTNVIGTFTILEAVRRHGV- 113
Query: 190 TLIYSSTCATYGEPE---KMPITEETPQAPINPYGKAKKMAEDII 231
L + ST YG+ E + TE TP P +PY K A+ ++
Sbjct: 114 RLHHISTDEVYGDLELDDRARFTESTPYNPSSPYSATKAGADMLV 158
Score = 60 (26.2 bits), Expect = 2.5e-16, Sum P(2) = 2.5e-16
Identities = 25/108 (23%), Positives = 44/108 (40%)
Query: 300 GTCVRDYIDVNDLVDAHVKALERAQPKKVG-IYNVGTGKGRSVKEFVEACKKATSANIKV 358
G VRD+I V+D A + L+R ++G Y + + R + + +
Sbjct: 207 GANVRDWIHVDDHNSAVRRILDRG---RIGRTYLISSEGERDNLTVLRTLLRLMDRDPDD 263
Query: 359 I-YEPRRPGDYAEVYSDPTKIRLELNWTAKYTNLQESLEIAWRWQKSH 405
+ R G DP+ + EL W K+T+ +E L W + +
Sbjct: 264 FDHVTDRVGHDLRYAIDPSTLYDELCWAPKHTDFEEGLRTTIDWYRDN 311
>UNIPROTKB|Q9ZAE8 [details] [associations]
symbol:acbB "dTDP-glucose 4,6-dehydratase" species:134676
"Actinoplanes sp. SE50/110" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 GO:GO:0045226 GO:GO:0008460 TIGRFAMs:TIGR01181
KO:K01710 PANTHER:PTHR10366:SF41 EMBL:Y18523 EMBL:CP003170
RefSeq:YP_006266644.1 ProteinModelPortal:Q9ZAE8 SMR:Q9ZAE8
GeneID:12821023 KEGG:ase:ACPL_3681 Uniprot:Q9ZAE8
Length = 320
Score = 195 (73.7 bits), Expect = 5.0e-16, Sum P(2) = 5.0e-16
Identities = 56/187 (29%), Positives = 89/187 (47%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSY-------RVTIVDNLSRGNIGAVKVLQELFPEPGRLQ 125
+LVTGGAG+IGSH L+ +VT+VD L G G ++ L E +P R
Sbjct: 3 ILVTGGAGFIGSHFVTSLISGDIATPQPVTQVTVVDKLGYG--GNLRNLAEASADP-RFS 59
Query: 126 FIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMAR 185
F+ D+ D + + + D V HFAA +V S + + + T V+L++ R
Sbjct: 60 FVRGDICDEGLIEGLMARH--DTVAHFAAETHVDRSVVASGPFVASNLVGTQVLLDAALR 117
Query: 186 HGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMIL 245
H + ++ ST YG + E P AP +PY +K ++ + L + + M V++
Sbjct: 118 HHIGRFLHVSTDEVYGSIDTGSWAEGHPLAPNSPYAASKAGSDLLALAYHQTHGMDVVVT 177
Query: 246 RYFNVIG 252
R N G
Sbjct: 178 RCSNNYG 184
Score = 62 (26.9 bits), Expect = 5.0e-16, Sum P(2) = 5.0e-16
Identities = 26/111 (23%), Positives = 49/111 (44%)
Query: 299 DGTCVRDYIDVNDLVDAHVKALERAQPK-KVG-IYNVGTGKGRSVKEFVEACKKATSANI 356
DG +RD++ V+D H + L A + G +Y++G G + E E +A A
Sbjct: 211 DGRNIRDWLHVSD----HCRGLALALGAGRAGEVYHIGGGWEATNLELTEILLEACGAPA 266
Query: 357 -KVIYEPRRPGDYAEVYSDPTKIRLELNWTAKYTNLQESLEIAWRWQKSHR 406
++ + R G D +KI EL + + + + + W +++R
Sbjct: 267 SRISFVTDRKGHDRRYSLDYSKIAGELGYRPR-VDFTDGIAETVAWYRANR 316
>UNIPROTKB|B0RVL0 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:509169
"Xanthomonas campestris pv. campestris str. B100" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
EMBL:AM920689 GenomeReviews:AM920689_GR GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
KO:K01710 PANTHER:PTHR10366:SF41 EMBL:AF204145
RefSeq:YP_001905139.1 ProteinModelPortal:B0RVL0 SMR:B0RVL0
STRING:B0RVL0 GeneID:6324993 KEGG:xca:xccb100_3734 PATRIC:24087420
OMA:GFIASHM ProtClustDB:CLSK445958 Uniprot:B0RVL0
Length = 351
Score = 177 (67.4 bits), Expect = 5.3e-16, Sum P(2) = 5.3e-16
Identities = 55/189 (29%), Positives = 84/189 (44%)
Query: 74 LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD 133
LVTGGAG+IG + L + RV +D L+ G + L L + F+ D+GD
Sbjct: 5 LVTGGAGFIGGNFVLEAVSRGIRVVNLDALTYA--GNLNTLASLEGNADHI-FVKGDIGD 61
Query: 134 AKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESM---------A 184
V + E+ DAV++FAA ++V S P + TL +LE++
Sbjct: 62 GALVTRLLQEHQPDAVLNFAAESHVDRSIEGPGAFIQTNVVGTLALLEAVRDYWKALPDT 121
Query: 185 RHGVDTLIYSSTCATYGE-PEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVM 243
R ++ ST YG E TE TP AP +PY +K ++ ++ F + V+
Sbjct: 122 RRDAFRFLHVSTDEVYGTLGETGKFTETTPYAPNSPYSASKAASDHLVRAFHHTYGLPVL 181
Query: 244 ILRYFNVIG 252
N G
Sbjct: 182 TTNCSNNYG 190
Score = 87 (35.7 bits), Expect = 5.3e-16, Sum P(2) = 5.3e-16
Identities = 35/114 (30%), Positives = 50/114 (43%)
Query: 299 DGTCVRDYIDVNDLVDAHVKALERAQPK-KVG-IYNVGTGKGRSVKEFVEA-C------- 348
DG VRD++ V+D H +A+ K +VG YNVG R E V+A C
Sbjct: 217 DGKQVRDWLFVSD----HCEAIRTVLAKGRVGETYNVGGNSERQNIEVVQAICALLDQHR 272
Query: 349 --KKATSANIKVIYEPRRPGDYAEVYSDPTKIRLELNWTAKYTNLQE-SLEIAW 399
+ ++ Y RPG D +K++ EL W YT Q +L + W
Sbjct: 273 PREDGKPRESQIAYVTDRPGHDRRYAIDASKLKDELGWEPAYTFEQGIALTVDW 326
>TAIR|locus:2025472 [details] [associations]
symbol:GAE2 "UDP-D-glucuronate 4-epimerase 2"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=ISS] InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370
PRINTS:PR01713 InterPro:IPR016040 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975 GO:GO:0032580
GO:GO:0044237 EMBL:AC020622 HOGENOM:HOG000168000 KO:K08679
ProtClustDB:CLSN2679288 GO:GO:0050378 EMBL:AF334734 EMBL:AY084754
EMBL:AK228396 IPI:IPI00543208 PIR:A86152 RefSeq:NP_171702.1
UniGene:At.17005 ProteinModelPortal:Q9LPC1 SMR:Q9LPC1 STRING:Q9LPC1
PaxDb:Q9LPC1 PRIDE:Q9LPC1 EnsemblPlants:AT1G02000.1 GeneID:839289
KEGG:ath:AT1G02000 TAIR:At1g02000 InParanoid:Q9LPC1 OMA:LFKFVDA
PhylomeDB:Q9LPC1 Genevestigator:Q9LPC1 Uniprot:Q9LPC1
Length = 434
Score = 220 (82.5 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 92/358 (25%), Positives = 164/358 (45%)
Query: 69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIY 128
GV+ VLVTG AG++G+H + L + V +DN + ++K ++ E + +
Sbjct: 91 GVS-VLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDTSLKRSRQALLERSGVFIVE 149
Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLE-SMARHG 187
D+ D + K F F VMH AA A V + +P Y H+ + + +LE + +
Sbjct: 150 GDINDLSLLKKLFEVVPFTHVMHLAAQAGVRYAMENPGSYVHSNIAGFVNLLEVCKSANP 209
Query: 188 VDTLIYSSTCATYGEPEKMPITEE--TPQAPINPYGKAKKMAEDIILDFSKNSDMAVMIL 245
++++S+ + YG K+P +E+ T Q P + Y KK E+I ++ +++ L
Sbjct: 210 QPAIVWASSSSVYGLNTKVPFSEKDRTDQ-PASLYAATKKAGEEIAHTYNHIYGLSLTGL 268
Query: 246 RYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRD 305
R+F V G P GR P++ A F R I+ G + + + GT RD
Sbjct: 269 RFFTVYG--PWGR------PDM--------AYFFFTRDILKGKAISIFEGAN-HGTVARD 311
Query: 306 YIDVNDLVDAHVKALERAQP------KKVG-----IYNVGTGKGRSVKEFVEACKKATSA 354
+ ++D+V + AL+ A+ KK G ++N+G V + V ++
Sbjct: 312 FTYIDDIVKGCLGALDTAEKSTGSGGKKRGAAQLRVFNLGNTSPVPVTDLVSILERLLKV 371
Query: 355 NIK--VIYEPRRPGDYAEVYSDPTKIRLELNWTAKYTNLQESLEIAWRWQKSH--RGG 408
K ++ PR GD +++ + + E + T+LQ L+ RW + +GG
Sbjct: 372 KAKRNMMKLPRN-GDVPFTHANISSAQREFGYKPS-TDLQTGLKKFVRWYLGYYKQGG 427
>UNIPROTKB|Q47Y09 [details] [associations]
symbol:CPS_3643 "NAD-dependent epimerase/dehydratase
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0044237
GO:GO:0000271 GO:GO:0016857 HOGENOM:HOG000167994 RefSeq:YP_270311.1
ProteinModelPortal:Q47Y09 SMR:Q47Y09 STRING:Q47Y09 GeneID:3519571
KEGG:cps:CPS_3643 PATRIC:21470213 KO:K02473 OMA:MIANEEL
BioCyc:CPSY167879:GI48-3665-MONOMER Uniprot:Q47Y09
Length = 344
Score = 216 (81.1 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 90/341 (26%), Positives = 149/341 (43%)
Query: 74 LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQ-ELFPEPGR-LQFIYADL 131
L+TG AG+IGS+ LL + +V +DN + G+ +Q ++ E + F+ D+
Sbjct: 19 LITGCAGFIGSNLLETLLLLNQKVVGLDNFATGHQHNFDEVQTQVSAEQWQNFYFVKGDI 78
Query: 132 GDAKAVNKFFS--ENAFDAVMHFAAVAYVGESTLDPLKYYH-NITSNTLVVLESMARHGV 188
+ S ++ D ++H AA+ V S DPL NIT L +L + V
Sbjct: 79 RQLEDCQTALSHYKSGVDYILHQAALGSVPRSIADPLLTNSANITG-FLTMLTAAKETQV 137
Query: 189 DTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILD-FSKNSDMAVMILRY 247
+ +Y+++ +TYG+ +P E+ P++PY K + E + D F K + LRY
Sbjct: 138 KSFVYAASSSTYGDHPALPKVEDAIGKPLSPYAVTKYVNE-LYADVFHKTYGLNCTGLRY 196
Query: 248 FNVIGS--DPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRD 305
FNV G DP+G A P+ + A L + G DG RD
Sbjct: 197 FNVFGKRQDPDGAYA-AVIPK-----------WTVAMIANEELLING------DGETSRD 238
Query: 306 YIDVNDLVDAHVKALERAQPKKVGIYNVGTGKGRSVKEFVEACKKATSAN-----IKVIY 360
+ V + V A++ A K +YNV G S+ + K A AN Y
Sbjct: 239 FCFVENAVQANILAATANDAGKNQVYNVALGDRTSLNTLFNSLKVALQANGVDYQKSPTY 298
Query: 361 EPRRPGDYAEVYSDPTKIRLELNWTAKYTNLQESLEIAWRW 401
+ R GD +D +K + + + ++ +Q+ ++ A W
Sbjct: 299 QDFRAGDVRHSQADISKAKSLIGFEPEF-KIQQGIDKAMPW 338
>TIGR_CMR|CPS_3643 [details] [associations]
symbol:CPS_3643 "NAD-dependent epimerase/dehydratase
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0044237
GO:GO:0000271 GO:GO:0016857 HOGENOM:HOG000167994 RefSeq:YP_270311.1
ProteinModelPortal:Q47Y09 SMR:Q47Y09 STRING:Q47Y09 GeneID:3519571
KEGG:cps:CPS_3643 PATRIC:21470213 KO:K02473 OMA:MIANEEL
BioCyc:CPSY167879:GI48-3665-MONOMER Uniprot:Q47Y09
Length = 344
Score = 216 (81.1 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 90/341 (26%), Positives = 149/341 (43%)
Query: 74 LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQ-ELFPEPGR-LQFIYADL 131
L+TG AG+IGS+ LL + +V +DN + G+ +Q ++ E + F+ D+
Sbjct: 19 LITGCAGFIGSNLLETLLLLNQKVVGLDNFATGHQHNFDEVQTQVSAEQWQNFYFVKGDI 78
Query: 132 GDAKAVNKFFS--ENAFDAVMHFAAVAYVGESTLDPLKYYH-NITSNTLVVLESMARHGV 188
+ S ++ D ++H AA+ V S DPL NIT L +L + V
Sbjct: 79 RQLEDCQTALSHYKSGVDYILHQAALGSVPRSIADPLLTNSANITG-FLTMLTAAKETQV 137
Query: 189 DTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILD-FSKNSDMAVMILRY 247
+ +Y+++ +TYG+ +P E+ P++PY K + E + D F K + LRY
Sbjct: 138 KSFVYAASSSTYGDHPALPKVEDAIGKPLSPYAVTKYVNE-LYADVFHKTYGLNCTGLRY 196
Query: 248 FNVIGS--DPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRD 305
FNV G DP+G A P+ + A L + G DG RD
Sbjct: 197 FNVFGKRQDPDGAYA-AVIPK-----------WTVAMIANEELLING------DGETSRD 238
Query: 306 YIDVNDLVDAHVKALERAQPKKVGIYNVGTGKGRSVKEFVEACKKATSAN-----IKVIY 360
+ V + V A++ A K +YNV G S+ + K A AN Y
Sbjct: 239 FCFVENAVQANILAATANDAGKNQVYNVALGDRTSLNTLFNSLKVALQANGVDYQKSPTY 298
Query: 361 EPRRPGDYAEVYSDPTKIRLELNWTAKYTNLQESLEIAWRW 401
+ R GD +D +K + + + ++ +Q+ ++ A W
Sbjct: 299 QDFRAGDVRHSQADISKAKSLIGFEPEF-KIQQGIDKAMPW 338
>UNIPROTKB|P95780 [details] [associations]
symbol:rmlB "dTDP-glucose 4,6-dehydratase" species:210007
"Streptococcus mutans UA159" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103 EMBL:AE014133
GenomeReviews:AE014133_GR GO:GO:0045226 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305 KO:K01710
PANTHER:PTHR10366:SF41 EMBL:D78182 RefSeq:NP_721810.1 PDB:1KEP
PDB:1KET PDBsum:1KEP PDBsum:1KET ProteinModelPortal:P95780
SMR:P95780 EnsemblBacteria:EBSTRT00000013418 GeneID:1028708
KEGG:smu:SMU_1457 PATRIC:19664935 OMA:HEDWWKA
ProtClustDB:CLSK877134 EvolutionaryTrace:P95780 Uniprot:P95780
Length = 348
Score = 214 (80.4 bits), Expect = 2.7e-15, P = 2.7e-15
Identities = 93/353 (26%), Positives = 162/353 (45%)
Query: 72 HVLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYA 129
+++VTGGAG+IGS+ + + VT++D L+ G L+E+ + R++ +
Sbjct: 6 NIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYA--GNRANLEEILGD--RVELVVG 61
Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD 189
D+ D++ V+K ++ DA++H+AA ++ S DP + + T ++LE+ ++ +
Sbjct: 62 DIADSELVDKLAAKA--DAIVHYAAESHNDNSLKDPSPFIYTNFVGTYILLEAARKYDI- 118
Query: 190 TLIYSSTCATYGE-P--EKMP---------ITEETPQAPINPYGKAKKMAEDIILDFSKN 237
+ ST YG+ P E +P T ET P +PY K ++ I+ + ++
Sbjct: 119 RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDLIVKAWVRS 178
Query: 238 SDMAVMILRYFNVIGSDPEGRLGE-APRPELREHGRISGACFDAARGIIAGLKVKGTDYS 296
+ I N G P + + PR +I+ I++G+K K Y
Sbjct: 179 FGVKATISNCSNNYG--PYQHIEKFIPR-------QITN--------ILSGIKPKL--YG 219
Query: 297 TADGTCVRDYIDVNDLVDAHVKALERAQPK-KVG-IYNVGTGKGRSVKEFVEACKKATSA 354
+G VRD+I ND H + K ++G Y +G ++ KE +E + S
Sbjct: 220 --EGKNVRDWIHTND----HSTGVWAILTKGRIGETYLIGADGEKNNKEVLELILEKMSQ 273
Query: 355 NIKVIYE--PRRPGDYAEVYSDPTKIRLELNWTAKYTNLQESLEIAWRWQKSH 405
K Y+ R G D TK+R EL W ++TN +E LE +W H
Sbjct: 274 P-KNAYDHVTDRAGHDLRYAIDSTKLREELGWKPQFTNFEEGLEDTIKWYTEH 325
>TIGR_CMR|GSU_2366 [details] [associations]
symbol:GSU_2366 "dTDP-glucose 4,6-dehydratase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0019305
"dTDP-rhamnose biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0008460
TIGRFAMs:TIGR01181 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 HSSP:P26391 OMA:IQYVKDR RefSeq:NP_953413.1
ProteinModelPortal:Q74AI8 SMR:Q74AI8 GeneID:2686639
KEGG:gsu:GSU2366 PATRIC:22027581 ProtClustDB:CLSK828808
BioCyc:GSUL243231:GH27-2368-MONOMER Uniprot:Q74AI8
Length = 358
Score = 213 (80.0 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 85/272 (31%), Positives = 128/272 (47%)
Query: 73 VLVTGGAGYIGSHAALRLL--KDSYRVTIVDNLS-RGNIGAVKVLQELFPEPGRLQFIYA 129
VLVTGGAG+IGS+ L RV +D L+ GN+ + +++ P +F+
Sbjct: 10 VLVTGGAGFIGSNFINHFLPANPGCRVINLDILTYAGNLRNLTAVEQ---NPA-YRFVKG 65
Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH--- 186
D+GDA V + +E DAV+HFAA ++V S L P + T V+LE RH
Sbjct: 66 DIGDADLVRRILAEERIDAVVHFAAESHVDRSILGPEIFVRTNVLGTQVLLEESRRHWES 125
Query: 187 -GVDTL--IYSSTCATYGE-PEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAV 242
++ ++ ST YG E TEETP AP +PY +K ++ ++ +++ + V
Sbjct: 126 GAIERFRFLHVSTDEVYGTLGETGYFTEETPLAPNSPYSASKAGSDLLVRAYNETFGLPV 185
Query: 243 MILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTC 302
+ R N G P + E P L H ++G L V G DG
Sbjct: 186 LTTRCSNNYG--PF-QFPEKLIP-LMIHNIVAGK----------PLPVYG------DGRN 225
Query: 303 VRDYIDVNDLVDAHVKALERAQPKKVGIYNVG 334
VRD++ V D A L+ +P +V +NVG
Sbjct: 226 VRDWLHVKDHSTAIETVLKGGKPGEV--FNVG 255
>UNIPROTKB|P0C7J0 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:190485
"Xanthomonas campestris pv. campestris str. ATCC 33913" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
EMBL:AE008922 GenomeReviews:AE008922_GR GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
ProtClustDB:CLSK445958 RefSeq:NP_636013.1 ProteinModelPortal:P0C7J0
SMR:P0C7J0 GeneID:1001158 KEGG:xcc:XCC0621 PATRIC:24071892
Uniprot:P0C7J0
Length = 351
Score = 169 (64.5 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 54/189 (28%), Positives = 83/189 (43%)
Query: 74 LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD 133
LVTG AG+IG + L + RV +D L+ G + L L + F+ D+GD
Sbjct: 5 LVTGRAGFIGGNFVLEAVSRGIRVVNLDALTYA--GNLNTLASLEGNADHI-FVKGDIGD 61
Query: 134 AKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESM---------A 184
V + E+ DAV++FAA ++V S P + TL +LE++
Sbjct: 62 GALVTRLLQEHQPDAVLNFAAESHVDRSIEGPGAFIQTNVVGTLALLEAVRDYWKALPDT 121
Query: 185 RHGVDTLIYSSTCATYGE-PEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVM 243
R ++ ST YG E TE TP AP +PY +K ++ ++ F + V+
Sbjct: 122 RRDAFRFLHVSTDEVYGTLGETGKFTETTPYAPNSPYSASKAASDHLVRAFHHTYGLPVL 181
Query: 244 ILRYFNVIG 252
N G
Sbjct: 182 TTNCSNNYG 190
Score = 83 (34.3 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 32/103 (31%), Positives = 45/103 (43%)
Query: 299 DGTCVRDYIDVNDLVDAHVKALERAQPK-KVG-IYNVGTGKGRSVKEFVEA-C------- 348
DG VRD++ V+D H +A+ K +VG YNVG R E V+A C
Sbjct: 217 DGKQVRDWLFVSD----HCEAIRTVLAKGRVGETYNVGGNSERQNIEVVQAICALLDQHR 272
Query: 349 --KKATSANIKVIYEPRRPGDYAEVYSDPTKIRLELNWTAKYT 389
+ ++ Y RPG D +K++ EL W YT
Sbjct: 273 PREDGKPRESQIAYVTDRPGHDRRYAIDASKLKDELGWEPAYT 315
>WB|WBGene00018737 [details] [associations]
symbol:F53B1.4 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225 GO:GO:0040017
GeneTree:ENSGT00530000063128 EMBL:FO081052 GO:GO:0008460
eggNOG:COG1088 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 OMA:AYNDARY HSSP:P26391 PIR:T16444
RefSeq:NP_508390.1 UniGene:Cel.908 ProteinModelPortal:Q20697
SMR:Q20697 STRING:Q20697 PaxDb:Q20697 EnsemblMetazoa:F53B1.4
GeneID:180525 KEGG:cel:CELE_F53B1.4 UCSC:F53B1.4 CTD:180525
WormBase:F53B1.4 InParanoid:Q20697 NextBio:909738 Uniprot:Q20697
Length = 342
Score = 195 (73.7 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
Identities = 63/194 (32%), Positives = 96/194 (49%)
Query: 68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGA--VKVLQELFPEPGRLQ 125
E T VL+TGG G+IGS+ + + ++ T N + GA + V +E+ P R +
Sbjct: 6 EEPTCVLITGGCGFIGSNY-INFTFNKWKNTKFINYDKLAFGASPLHVEKEIRESP-RYK 63
Query: 126 FIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPL-KYYHNITSNTLVVLESMA 184
F+ A L D + K EN D V+HFAA+ +V ES D + NI S T +LES+
Sbjct: 64 FVEAALEDQPTLIKTLQENEVDMVIHFAAITHVDESYSDRIGTIQDNIISTT-TLLESIV 122
Query: 185 RH---GVDTLIYSSTCATYGEP--EKMPITEETPQA-PINPYGKAKKMAEDIILDFSKNS 238
GV L++ ST YG+ + P +E P NPY +K E +I + +
Sbjct: 123 NSPYKGVKKLVHISTDEVYGDSFEDTTPKSESASLPNPTNPYAASKAACEMVIRSYWHSY 182
Query: 239 DMAVMILRYFNVIG 252
+ +++R NV G
Sbjct: 183 KLPYVMVRMNNVYG 196
Score = 49 (22.3 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
Identities = 32/119 (26%), Positives = 46/119 (38%)
Query: 288 LKVKGTDYST-ADGTCVRDYIDVNDLVDAHVK-ALERAQPKKVGIYNVGTGKGRSVKEFV 345
L + G Y DG R ++ V D +A + ALE + IYN+GT + E
Sbjct: 211 LALDGKPYPLMGDGLHTRSWMYVEDCSEAITRVALEGTLGE---IYNIGTDFEMTNIELT 267
Query: 346 EAC---------KKATSANIKVIYEPRRPGDYAEVYSDPTKIRLELNWTAKYTNLQESL 395
+ ++ T+ I P RP Y D +KIR + W T E L
Sbjct: 268 KMIHFTVSKLLNREPTAPTFAPI--PDRPYHDRRYYIDFSKIRNAMGWQCT-TPFSEGL 323
>TAIR|locus:2076066 [details] [associations]
symbol:GAE6 "UDP-D-glucuronate 4-epimerase 6"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM;IDA]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006569 "tryptophan catabolic process" evidence=RCA]
[GO:0009684 "indoleacetic acid biosynthetic process" evidence=RCA]
[GO:0005768 "endosome" evidence=IDA] [GO:0005802 "trans-Golgi
network" evidence=IDA] InterPro:IPR001509 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040 GO:GO:0016021
GO:GO:0005794 EMBL:CP002686 GenomeReviews:BA000014_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005975 GO:GO:0005768 GO:GO:0032580 GO:GO:0044237
GO:GO:0005802 EMBL:AP001297 HSSP:P04397 HOGENOM:HOG000168000
KO:K08679 ProtClustDB:CLSN2679288 GO:GO:0050378 EMBL:AJ879893
EMBL:AF083691 EMBL:AF370210 EMBL:AY056117 EMBL:AY062625
EMBL:AY133771 IPI:IPI00538638 RefSeq:NP_189024.1 UniGene:At.24934
UniGene:At.67131 UniGene:At.71799 ProteinModelPortal:Q9LIS3
SMR:Q9LIS3 IntAct:Q9LIS3 STRING:Q9LIS3 PaxDb:Q9LIS3 PRIDE:Q9LIS3
EnsemblPlants:AT3G23820.1 GeneID:821965 KEGG:ath:AT3G23820
TAIR:At3g23820 InParanoid:Q9LIS3 OMA:NTAMPFS PhylomeDB:Q9LIS3
BRENDA:5.1.3.6 Genevestigator:Q9LIS3 Uniprot:Q9LIS3
Length = 460
Score = 208 (78.3 bits), Expect = 3.9e-14, P = 3.9e-14
Identities = 96/353 (27%), Positives = 156/353 (44%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVK-VLQELFPEPGRLQFIYADL 131
VLVTG AG++GSH +L L K V DN + ++K QEL E ++ + DL
Sbjct: 114 VLVTGAAGFVGSHCSLALRKRGDGVLGFDNFNDYYDPSLKRARQELL-EKQQVFIVEGDL 172
Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLE-SMARHGVDT 190
D + K F F ++H AA A V + +P Y + + + +LE + A +
Sbjct: 173 NDGPLLRKLFDVVPFTHILHLAAQAGVRYAMKNPQSYIASNIAGFVNLLEVAKAANPQPA 232
Query: 191 LIYSSTCATYGEPEKMPITEE--TPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYF 248
++++S+ + YG + P +EE T Q P + Y KK E+I ++ +++ LR+F
Sbjct: 233 IVWASSSSVYGLNTENPFSEEHRTDQ-PASLYAATKKAGEEIAHTYNHIYGLSLTGLRFF 291
Query: 249 NVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCV-RDYI 307
V G P GR P++ A F + I+ G + Y T D V RD+
Sbjct: 292 TVYG--PWGR------PDM--------AYFFFTKDILHGKSID--IYRTQDNQEVARDFT 333
Query: 308 DVNDLVDAHVKALERAQP------KKVG-----IYNVGTGKGRSVKEFVEACKK--ATSA 354
++D+V V AL+ A+ KK G +YN+G V V + T A
Sbjct: 334 YIDDIVKGCVGALDTAEKSTGSGGKKRGQAQLRVYNLGNTSPVPVGRLVSILEGLLGTKA 393
Query: 355 NIKVIYEPRRPGDYAEVYSDPTKIRLELNWTAKYTNLQESLEIAWRWQKSHRG 407
+I PR GD +++ + + + T+L L +W + G
Sbjct: 394 KKHLIKMPRN-GDVPYTHANVSLAYKDFGYKPT-TDLAAGLRKFVKWYVGYYG 444
>UNIPROTKB|Q0BYW6 [details] [associations]
symbol:HNE_2639 "UDP-glucuronate 5'-epimerase"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0050379
"UDP-glucuronate 5'-epimerase activity" evidence=ISS]
InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009103 EMBL:CP000158 GenomeReviews:CP000158_GR
HOGENOM:HOG000168000 KO:K08679 GO:GO:0050379 RefSeq:YP_761327.1
ProteinModelPortal:Q0BYW6 STRING:Q0BYW6 GeneID:4289771
KEGG:hne:HNE_2639 PATRIC:32218139 OMA:NSAYSAN
BioCyc:HNEP228405:GI69-2655-MONOMER Uniprot:Q0BYW6
Length = 334
Score = 203 (76.5 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 83/322 (25%), Positives = 139/322 (43%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR---GNIGAVKVLQELFPEPGRLQFIYA 129
+LVTG AG+IGS ALRLLK+ + VT VD + + + + + RL+ I
Sbjct: 3 ILVTGAAGFIGSEMALRLLKEGHSVTGVDCFTPYYDPQLKEDRAARLTAFDDFRLERIRI 62
Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD 189
+ D++A+ F + + V+HFAA A V S P + + +++ RHG
Sbjct: 63 E--DSEAMEAVFQRDTPEMVLHFAAQAGVRYSLDHPRDFIDANIVGSFNIIDLSRRHGTQ 120
Query: 190 TLIYSSTCATYGEPEKMPITE-ETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYF 248
L+ +ST + YG +K P E ++ P+ Y K +E I + + +LR+F
Sbjct: 121 HLVMASTSSAYGANQKFPFEERDSAPYPLTIYAATKLASELIAHSHAHLYGVPTTVLRFF 180
Query: 249 NVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRDYID 308
+V G P GR A L G D G ++ Y +R +D
Sbjct: 181 SVYG--PWGRPDMAFF--LFTDKIFKGQPIDVFNH---GDLLRDFTYIDDLVEAIRRLMD 233
Query: 309 VNDLVDAHVKALERAQP-KKVGIYNVGTGKGRSVKEFVEACKKATSANIKVIYEPRRPGD 367
+V H+ + P + N+G + +++EA + A + +PGD
Sbjct: 234 TPPVVGNHIIRGDSLSPVAPYRLVNIGNASPVRLMDYIEAIEGAIGRKAEKNMIDMQPGD 293
Query: 368 YAEVYSDPTKIRLELNWTAKYT 389
+ ++D +RL L+ YT
Sbjct: 294 VKQTFAD---VRL-LDALTGYT 311
>TAIR|locus:2202960 [details] [associations]
symbol:RHM1 "rhamnose biosynthesis 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=ISS] [GO:0009507 "chloroplast" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0010253
"UDP-rhamnose biosynthetic process" evidence=IDA;IMP] [GO:0050377
"UDP-glucose 4,6-dehydratase activity" evidence=IDA] [GO:0010280
"UDP-L-rhamnose synthase activity" evidence=IDA] [GO:0010315 "auxin
efflux" evidence=IMP] [GO:0051555 "flavonol biosynthetic process"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0009744 "response to sucrose
stimulus" evidence=RCA] [GO:0009813 "flavonoid biosynthetic
process" evidence=RCA] [GO:0010224 "response to UV-B" evidence=RCA]
InterPro:IPR001509 InterPro:IPR005888 InterPro:IPR005913
Pfam:PF01370 Pfam:PF04321 InterPro:IPR016040 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0009506 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0010315 EMBL:AC007260
GO:GO:0051555 eggNOG:COG1091 GO:GO:0008831 GO:GO:0045226
EMBL:AY042833 EMBL:AY081471 IPI:IPI00543019 PIR:C96814
RefSeq:NP_177978.1 UniGene:At.198 UniGene:At.71030
ProteinModelPortal:Q9SYM5 SMR:Q9SYM5 IntAct:Q9SYM5 STRING:Q9SYM5
PaxDb:Q9SYM5 PRIDE:Q9SYM5 EnsemblPlants:AT1G78570.1 GeneID:844193
KEGG:ath:AT1G78570 TAIR:At1g78570 HOGENOM:HOG000167988
InParanoid:Q9SYM5 KO:K12450 OMA:IKFVDNR PhylomeDB:Q9SYM5
ProtClustDB:PLN02260 BioCyc:ARA:AT1G78570-MONOMER
BioCyc:MetaCyc:AT1G78570-MONOMER Genevestigator:Q9SYM5
GO:GO:0008460 GO:GO:0050377 GO:GO:0010280 GO:GO:0010253
TIGRFAMs:TIGR01181 Uniprot:Q9SYM5
Length = 669
Score = 206 (77.6 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 83/316 (26%), Positives = 136/316 (43%)
Query: 72 HVLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYA 129
++L+TG AG+I SH A RL++ Y++ ++D L +K L P +F+
Sbjct: 8 NILITGAAGFIASHVANRLIRSYPDYKIVVLDKLDY--CSNLKNLNPSKHSPN-FKFVKG 64
Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-V 188
D+ A VN D +MHFAA +V S + ++ N T V+LE+ G +
Sbjct: 65 DIASADLVNHLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQI 124
Query: 189 DTLIYSSTCATYGEPEKMPIT--EETPQA-PINPYGKAKKMAEDIILDFSKNSDMAVMIL 245
I+ ST YGE ++ + E Q P NPY K AE +++ + ++ + V+
Sbjct: 125 RRFIHVSTDEVYGETDEDALVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 184
Query: 246 RYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRD 305
R NV G + + E P+ A RG + L + G DG+ VR
Sbjct: 185 RGNNVYGPN---QFPEKLIPKF---------ILLAMRGQV--LPIHG------DGSNVRS 224
Query: 306 YIDVNDLVDAHVKALERAQPKKV-GIYNVGTGKGRSV-KEFVEACKKATSANIKVIYEPR 363
Y+ D+ +A L + + V I + V K+ + ANIK +
Sbjct: 225 YLYCEDVAEAFEVVLHKGEVGHVYNIGTKKERRVNDVAKDICKLFNMDPEANIKFV--DN 282
Query: 364 RPGDYAEVYSDPTKIR 379
RP + + D K++
Sbjct: 283 RPFNDQRYFLDDQKLK 298
>TIGR_CMR|GSU_1975 [details] [associations]
symbol:GSU_1975 "NAD-dependent epimerase/dehydratase
family protein" species:243231 "Geobacter sulfurreducens PCA"
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016829 "lyase activity" evidence=ISS] [GO:0016857 "racemase
and epimerase activity, acting on carbohydrates and derivatives"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE017180 GenomeReviews:AE017180_GR
HOGENOM:HOG000167994 GO:GO:0008460 PANTHER:PTHR10366:SF41
HSSP:P95780 ProtClustDB:CLSK864552 RefSeq:NP_953024.1
ProteinModelPortal:Q74BR6 GeneID:2685764 KEGG:gsu:GSU1975
PATRIC:22026813 OMA:AMKGCDV BioCyc:GSUL243231:GH27-1926-MONOMER
InterPro:IPR026390 TIGRFAMs:TIGR04180 Uniprot:Q74BR6
Length = 336
Score = 193 (73.0 bits), Expect = 7.5e-13, P = 7.5e-13
Identities = 61/189 (32%), Positives = 88/189 (46%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYA- 129
+LVTG G+IGSH LL Y R + N S + G L L PE + ++A
Sbjct: 8 ILVTGADGFIGSHLTEALLMRGYDTRAFVYYN-SFNSWGW---LDHLDPELLKSLDVFAG 63
Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD 189
D+ D V + + D V+H AA+ + S P Y TL V+++ GV
Sbjct: 64 DIRDPHGVRE--AMKGCDVVLHLAALIAIPYSYHSPDTYVDTNVKGTLNVVQAARELGVA 121
Query: 190 TLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFN 249
++++ST YG +PITEE P +PY +K A+ I + F + D V I+R FN
Sbjct: 122 KVVHTSTSEVYGTARFVPITEEHPLQGQSPYSASKIGADQIAMSFYSSFDTPVAIIRPFN 181
Query: 250 VIGSDPEGR 258
G R
Sbjct: 182 TYGPRQSAR 190
>DICTYBASE|DDB_G0279465 [details] [associations]
symbol:tgds "putative dTDP-D-glucose 4,6-dehydratase"
species:44689 "Dictyostelium discoideum" [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=IEA] [GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016829 "lyase activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 dictyBase:DDB_G0279465 GO:GO:0000166
Gene3D:3.40.50.720 GenomeReviews:CM000152_GR GO:GO:0050662
GO:GO:0009225 EMBL:AAFI02000031 GO:GO:0008460 eggNOG:COG1088
HSSP:P27830 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
RefSeq:XP_641641.1 ProteinModelPortal:Q54WS6 STRING:Q54WS6
EnsemblProtists:DDB0231748 GeneID:8622047 KEGG:ddi:DDB_G0279465
ProtClustDB:CLSZ2430684 Uniprot:Q54WS6
Length = 434
Score = 194 (73.4 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 76/282 (26%), Positives = 131/282 (46%)
Query: 70 VTHVLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSR-GNIGAVK-VLQELFPEPGRLQ 125
+ +L+TGGAG+IGSH A+ L K + ++ ++D L NI + VL+EL +
Sbjct: 9 IQKILITGGAGFIGSHLAIYLTKKFKNSKIIVLDKLDYCSNINNLGCVLKEL-----NFK 63
Query: 126 FIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMAR 185
F ++ D++ + F + D V+H AA +V S +K+ N T +LE+
Sbjct: 64 FYKGNILDSELLENIFEKEKIDIVIHLAAYTHVDNSFKQSIKFTENNILGTHYLLETCKN 123
Query: 186 HGVDTLIYSSTCATYG-------EPEKMPITEETPQA----PINPYGKAKKMAEDIILDF 234
+ + IY ST YG + I + + + P NPY +K AE ++ +
Sbjct: 124 YKLKKFIYVSTDEVYGSGLIEDNDDNNNSINQSSNEKSILNPTNPYSASKAGAEHLVQSY 183
Query: 235 SKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTD 294
K+ + V+I R N+ G P+ PE +I + ++ K K T
Sbjct: 184 YKSFKLPVIITRANNIYG--PK------QYPE-----KIIPKFIN----LLLNNK-KCTI 225
Query: 295 YSTADGTCVRDYIDVNDLVDAHVKALERAQPKKVG-IYNVGT 335
+ T T R+Y+ ++D+V A L + + +G +YN+GT
Sbjct: 226 HGTGKNT--RNYLYIDDIVSAFDIILRKGE---IGNVYNIGT 262
>WB|WBGene00005019 [details] [associations]
symbol:sqv-1 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0040025 "vulval development"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0060465 "pharynx development" evidence=IMP]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0009792
GO:GO:0002009 GO:GO:0005737 GO:GO:0018991 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0040025
GeneTree:ENSGT00530000063128 KO:K08678 GO:GO:0048040 EMBL:FO081016
EMBL:AY147933 PIR:T15892 RefSeq:NP_501418.1 UniGene:Cel.19768
ProteinModelPortal:G5EF65 SMR:G5EF65 EnsemblMetazoa:D2096.4.1
EnsemblMetazoa:D2096.4.2 GeneID:177631 KEGG:cel:CELE_D2096.4
CTD:177631 WormBase:D2096.4 OMA:FSEALIM NextBio:897688
Uniprot:G5EF65
Length = 467
Score = 194 (73.4 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 56/194 (28%), Positives = 97/194 (50%)
Query: 65 QHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRL 124
++EE +L+TGGAG++GSH +L+ D + V +DN G K ++ P
Sbjct: 131 RNEETRKRILITGGAGFVGSHLVDKLMLDGHEVIALDNYFTGR---KKNVEHWIGHPN-F 186
Query: 125 QFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMA 184
+ ++ D+ VN +F E D + H A+ A +P+K T T+ +L +A
Sbjct: 187 EMVHHDV-----VNPYFVE--VDQIYHLASPASPPHYMYNPVKTIKTNTLGTINML-GLA 238
Query: 185 RHGVDTLIYSSTCATYGEPEKMPITEETPQAPIN---P---YGKAKKMAEDIILDFSKNS 238
+ T++ +ST YG+PE P ET +N P Y + K++AE +++ ++K
Sbjct: 239 KRVKATVLLASTSEVYGDPEVHP-QPETYWGHVNTIGPRACYDEGKRVAESLMVAYNKQE 297
Query: 239 DMAVMILRYFNVIG 252
++ + I R FN G
Sbjct: 298 NIKIRIARIFNTFG 311
>UNIPROTKB|Q0C421 [details] [associations]
symbol:HNE_0794 "Putative GDP-6-deoxy-D-lyxo-4-hexulose
reductase" species:228405 "Hyphomonas neptunium ATCC 15444"
[GO:0000271 "polysaccharide biosynthetic process" evidence=ISS]
[GO:0003824 "catalytic activity" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 EMBL:CP000158 GenomeReviews:CP000158_GR
GO:GO:0000271 GO:GO:0016857 HOGENOM:HOG000167992 OMA:NLLEACA
RefSeq:YP_759522.1 ProteinModelPortal:Q0C421 STRING:Q0C421
GeneID:4288576 KEGG:hne:HNE_0794 PATRIC:32214396
BioCyc:HNEP228405:GI69-836-MONOMER Uniprot:Q0C421
Length = 324
Score = 189 (71.6 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 80/332 (24%), Positives = 144/332 (43%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
+L+TG G++G + L+ Y+ + + L+ GA + L+ + R DL
Sbjct: 6 ILITGANGFVGGYMIRELVAAGYQHSELHTLTVS--GAEQSLR--IGQAHR-----CDLR 56
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH-NITSNTLV--VLESMARHGVD 189
D+ ++++ E ++H AA+A ++ DP + N + + + + + H V
Sbjct: 57 DSASIHRLLQEVQPTGIVHLAAIALPSQAKADPSAAWAVNFEAVRQLGEAVLACSPHAV- 115
Query: 190 TLIYSSTCATYGEPEKM---PITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILR 246
L+++ + +YG + E T P+ PY A K A D+ L +N + + R
Sbjct: 116 -LVFAGSSESYGASFNTVAGAVNEGTALRPLTPYA-ATKAAADVALGQMRNDGLNAVRFR 173
Query: 247 YFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRDY 306
FN G P G++P ++ S A A IIAG D +RD+
Sbjct: 174 AFNHTG--P----GQSP-----DYVVASFAAQIAQ--IIAGDHPPVIRVGNLDA--MRDF 218
Query: 307 IDVNDLVDAHVKALE-RAQPKKVGIYNVGTGKGRSVKEFVEACKKATSANIKVIYEPR-- 363
+DV D+V + ALE P G++N+ +G RS++ + +I + +P
Sbjct: 219 VDVRDVVRGYRLALETELDPVSEGVFNLASGTPRSIRSILNTLIDIAGVDIAIETDPAKL 278
Query: 364 RPGDYAEVYSDPTKIRLELNWTAKYTNLQESL 395
R D + D + R EL W Y +++L
Sbjct: 279 RKNDVPRTWGDANRARTELGWVP-YLAFEQTL 309
>TIGR_CMR|CBU_0676 [details] [associations]
symbol:CBU_0676 "NAD dependent epimerase/dehydratase"
species:227377 "Coxiella burnetii RSA 493" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GenomeReviews:AE016828_GR GO:GO:0044237 EMBL:AF387640
ProteinModelPortal:Q93N67 PRIDE:Q93N67 PATRIC:17930035
HOGENOM:HOG000168002 ProtClustDB:CLSK905415
BioCyc:CBUR227377:GJ7S-674-MONOMER Uniprot:Q93N67
Length = 337
Score = 188 (71.2 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 58/189 (30%), Positives = 91/189 (48%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFP-EPGRLQFIYADL 131
+LVTGGAGY+GS +LL+ YRVT+ D L G+ + P E L + D+
Sbjct: 8 ILVTGGAGYVGSALVPQLLELGYRVTVYDTLFFGD--------DFLPKENPYLNIVEGDI 59
Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDP-LKYYHNITSNTLVVLESMARHGVDT 190
D + + + F + DAV+ A ++ LD L N+ + +V + A GV
Sbjct: 60 RDTERLKQCFKDA--DAVISLACISNDASFELDETLSTSINLEAFEPMVKAAKAA-GVKR 116
Query: 191 LIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNV 250
IY+S+ + YG E +TEE P P+ Y K K M E ++ ++ + + +R +
Sbjct: 117 FIYASSSSVYGVSETKDVTEEHPLVPLTLYNKYKGMCEPLLFKH-QSPEFVCVTIRPATL 175
Query: 251 IGSDPEGRL 259
G P RL
Sbjct: 176 CGYAPRQRL 184
>FB|FBgn0035848 [details] [associations]
symbol:CG7979 species:7227 "Drosophila melanogaster"
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0044237 "cellular metabolic
process" evidence=IEA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 EMBL:AE014296 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 GO:GO:0008460 KO:K08678 OMA:LGHENFE
EMBL:AY051913 RefSeq:NP_648182.1 UniGene:Dm.20044 HSSP:P93031
SMR:Q9VSE8 STRING:Q9VSE8 EnsemblMetazoa:FBtr0076690 GeneID:38911
KEGG:dme:Dmel_CG7979 UCSC:CG7979-RA FlyBase:FBgn0035848
InParanoid:Q9VSE8 OrthoDB:EOG45HQCS GenomeRNAi:38911 NextBio:810971
Uniprot:Q9VSE8
Length = 441
Score = 169 (64.5 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 54/186 (29%), Positives = 87/186 (46%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
+L+TGGAG++GSH L+ + V +VDN G V+ L E + I+ D+
Sbjct: 118 ILITGGAGFVGSHLVDDLMVQGHEVIVVDNFFTGRKRNVE--HWLGHE--NFELIHHDI- 172
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
VN F E D + H A+ A +P+K T T+ VL +A+ + ++
Sbjct: 173 ----VNPLFIE--IDEIYHLASPASPPHYMYNPVKTIKTNTMGTINVL-GLAKRVMAKVL 225
Query: 193 YSSTCATYGEPEKMPITEETPQAPINP------YGKAKKMAEDIILDFSKNSDMAVMILR 246
+ST YG+P P ET +NP Y + K+++E + ++K + V + R
Sbjct: 226 IASTSEVYGDPTVHP-QPETYWGHVNPIGPRACYDEGKRVSETLSYAYAKQEKVQVRVAR 284
Query: 247 YFNVIG 252
FN G
Sbjct: 285 IFNTYG 290
Score = 64 (27.6 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 25/100 (25%), Positives = 40/100 (40%)
Query: 299 DGTCVRDYIDVNDLVDAHVKALERAQPKKVGIYNVGTGKGRSVKEFVEACKKATSANIKV 358
+G R + V+DLVD + + + V N+G +++ EF E KK +
Sbjct: 319 NGKQTRSFQYVSDLVDGMIALMASNYTQPV---NLGNPVEQTIGEFAEIIKKLVGGPSVI 375
Query: 359 IYEPRRPGDYAEVYSDPTKIRLELNWTAKY---TNLQESL 395
D D T+ R L+W K T LQ ++
Sbjct: 376 KQSKAMEDDPQRRKPDITRARQLLHWEPKVPLETGLQRTI 415
>UNIPROTKB|P26391 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:99287
"Salmonella enterica subsp. enterica serovar Typhimurium str. LT2"
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=ISS]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=ISS] [GO:0070404 "NADH binding" evidence=IDA]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
Gene3D:3.40.50.720 EMBL:AE006468 EMBL:X56793
GenomeReviews:AE006468_GR GO:GO:0009103 GO:GO:0070404 GO:GO:0045226
GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088
GO:GO:0019305 HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
PANTHER:PTHR10366:SF41 OMA:AKKAFRF PIR:S15299 RefSeq:NP_461042.1
PDB:1G1A PDB:1KEU PDB:1KEW PDBsum:1G1A PDBsum:1KEU PDBsum:1KEW
ProteinModelPortal:P26391 SMR:P26391 PRIDE:P26391 GeneID:1253618
KEGG:stm:STM2097 PATRIC:32382777 EvolutionaryTrace:P26391
Uniprot:P26391
Length = 361
Score = 144 (55.7 bits), Expect = 5.2e-12, Sum P(3) = 5.2e-12
Identities = 36/114 (31%), Positives = 61/114 (53%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSYRVTI-VDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
+L+TGGAG+IGS ++K++ + +D L+ G ++ L ++ E R F +AD+
Sbjct: 3 ILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYA--GNLESLSDI-SESNRYNFEHADI 59
Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMAR 185
D+ + + F + DAVMH AA ++V S P + T +LE +AR
Sbjct: 60 CDSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLE-VAR 112
Score = 71 (30.1 bits), Expect = 5.2e-12, Sum P(3) = 5.2e-12
Identities = 29/95 (30%), Positives = 39/95 (41%)
Query: 300 GTCVRDYIDVNDLVDAHVKALERAQPK-KVG-IYNVGTGKGRSVKEFV--------EACK 349
G +RD++ V D H +AL + K G YN+G + + V E
Sbjct: 227 GDQIRDWLYVED----HARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVP 282
Query: 350 KATSANIKVIYEPRRPGDYAEVYSDPTKIRLELNW 384
KATS ++ Y RPG D KI EL W
Sbjct: 283 KATSYREQITYVADRPGHDRRYAIDAGKISRELGW 317
Score = 51 (23.0 bits), Expect = 5.2e-12, Sum P(3) = 5.2e-12
Identities = 11/48 (22%), Positives = 24/48 (50%)
Query: 206 MPI-TEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIG 252
+P+ TE T AP +PY +K ++ ++ + + + ++ N G
Sbjct: 152 LPLFTETTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYG 199
>UNIPROTKB|P37777 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:623
"Shigella flexneri" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:X71970
EMBL:AE005674 EMBL:AE014073 GenomeReviews:AE005674_GR
GenomeReviews:AE014073_GR GO:GO:0009103 GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
PANTHER:PTHR10366:SF41 OMA:AKKAFRF EMBL:L14842 PIR:S41534
RefSeq:NP_707936.1 RefSeq:NP_837663.1 ProteinModelPortal:P37777
SMR:P37777 EnsemblBacteria:EBESCT00000086479
EnsemblBacteria:EBESCT00000092444 GeneID:1025931 GeneID:1078528
KEGG:sfl:SF2104 KEGG:sfx:S2227 PATRIC:18705961 Uniprot:P37777
Length = 361
Score = 147 (56.8 bits), Expect = 5.7e-12, Sum P(3) = 5.7e-12
Identities = 40/115 (34%), Positives = 66/115 (57%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
+LVTGGAG+IGS ++ ++ V VD L+ G ++ L ++ + R F +AD+
Sbjct: 3 ILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYA--GNLESLADV-SDSERYAFEHADI 59
Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH 186
DA A+++ F+++ DAVMH AA ++V S P + T V+LE+ AR+
Sbjct: 60 CDAVAMSRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEA-ARN 113
Score = 62 (26.9 bits), Expect = 5.7e-12, Sum P(3) = 5.7e-12
Identities = 27/100 (27%), Positives = 41/100 (41%)
Query: 300 GTCVRDYIDVNDLVDAHVKALERAQPK-KVG-IYNVGT-GKGRSVKEFVEACK------- 349
G +RD++ V D H +AL + K G YN+G + +++ + C
Sbjct: 227 GDQIRDWLYVED----HARALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVP 282
Query: 350 KATSANIKVIYEPRRPGDYAEVYSDPTKIRLELNWTAKYT 389
K S ++ Y RPG D KI EL W + T
Sbjct: 283 KEKSYREQITYVADRPGHDRRYAIDADKISRELGWKPQET 322
Score = 56 (24.8 bits), Expect = 5.7e-12, Sum P(3) = 5.7e-12
Identities = 12/50 (24%), Positives = 25/50 (50%)
Query: 204 EKMPI-TEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIG 252
E +P+ TE T AP +PY +K ++ ++ + + + ++ N G
Sbjct: 150 EALPLFTETTAYAPSSPYSASKASSDHLVRAWKRTYGLPTIVTNCSNNYG 199
>UNIPROTKB|F1SU22 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0048040 "UDP-glucuronate
decarboxylase activity" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 GO:GO:0048040 OMA:LGHENFE
EMBL:CU929826 Ensembl:ENSSSCT00000008920 Uniprot:F1SU22
Length = 397
Score = 186 (70.5 bits), Expect = 8.6e-12, P = 8.6e-12
Identities = 58/191 (30%), Positives = 87/191 (45%)
Query: 67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQF 126
E+ +L+TGGAG++GSH +L+ D + VT+VDN G V E + +
Sbjct: 62 EKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNV----EHWIGHENFEL 117
Query: 127 IYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH 186
I D+ V + E D + H A+ A +P+K T TL +L R
Sbjct: 118 INHDV-----VEPLYIE--VDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRV 170
Query: 187 GVDTLIYSSTCATYGEPEKMPITEE-----TPQAPINPYGKAKKMAEDIILDFSKNSDMA 241
G L+ +ST YG+PE P TE+ P P Y + K++AE + + K +
Sbjct: 171 GA-RLLLASTSEVYGDPEVHPQTEDYWGHVNPVGPRACYDEGKRVAETMCYAYMKQEGVE 229
Query: 242 VMILRYFNVIG 252
V + R FN G
Sbjct: 230 VRVARIFNTFG 240
>UNIPROTKB|E1BMI4 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050662 "coenzyme binding" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803
InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 GeneTree:ENSGT00530000063128 CTD:80146
KO:K08678 GO:GO:0048040 OMA:LGHENFE EMBL:DAAA02031058
EMBL:DAAA02031059 EMBL:DAAA02031060 IPI:IPI00712240
RefSeq:NP_001192993.1 UniGene:Bt.57545 ProteinModelPortal:E1BMI4
Ensembl:ENSBTAT00000007374 GeneID:534788 KEGG:bta:534788
NextBio:20876532 Uniprot:E1BMI4
Length = 420
Score = 186 (70.5 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 60/191 (31%), Positives = 88/191 (46%)
Query: 67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQF 126
E+ +LVTGGAG++GSH +L+ D + VT+VDN G V E + +
Sbjct: 85 EKDRKRILVTGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNV----EHWIGHENFEL 140
Query: 127 IYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH 186
I D+ V + E D + H A+ A +P+K T TL +L R
Sbjct: 141 INHDV-----VEPLYIE--VDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRV 193
Query: 187 GVDTLIYSSTCATYGEPEKMPITEET--PQAPINP---YGKAKKMAEDIILDFSKNSDMA 241
G L+ +ST YG+PE P TE+ PI P Y + K++AE + + K +
Sbjct: 194 GA-RLLLASTSEVYGDPEVHPQTEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVE 252
Query: 242 VMILRYFNVIG 252
V + R FN G
Sbjct: 253 VRVARIFNTFG 263
>TIGR_CMR|GSU_0626 [details] [associations]
symbol:GSU_0626 "GDP-mannose 4,6-dehydratase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0019673
KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
RefSeq:NP_951684.1 ProteinModelPortal:Q74FI2 SMR:Q74FI2
GeneID:2685242 KEGG:gsu:GSU0626 PATRIC:22024003 OMA:YACAKAY
ProtClustDB:CLSK827959 BioCyc:GSUL243231:GH27-625-MONOMER
Uniprot:Q74FI2
Length = 349
Score = 183 (69.5 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 93/329 (28%), Positives = 137/329 (41%)
Query: 74 LVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNIGAVKVLQELFPEPG-RLQFIYADL 131
L+TG +G GS+ A LL Y V ++ S N G + L EP RL Y DL
Sbjct: 5 LITGISGQDGSYLAELLLGKGYEVHGVIRRSSSFNTGRIDHLYRDPHEPDVRLFLHYGDL 64
Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITS-NTLVVLESMARHGVDT 190
DA ++N+ E D + + A ++V S D +Y I + T+ +LE + G++T
Sbjct: 65 NDASSINRVLREVRPDEIYNLGAQSHVRVS-FDVPEYTGEIDALGTVRLLEGIRETGLNT 123
Query: 191 LIY-SSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFN 249
Y +S+ YG+ + P E TP P +PY AK A I +++ ++ M FN
Sbjct: 124 RFYQASSSELYGKVVETPQKETTPFYPRSPYACAKAYAYYITVNYRESYGMYACNGILFN 183
Query: 250 VIGSDPEGRLGEA--PRPELREHGRISGACFDAARGIIAGLKVK-----GTDYSTADGTC 302
P R GE R R GRI D R + L K DY A
Sbjct: 184 --HESP--RRGETFVTRKITRAAGRIKTGLQD--RLYLGNLDAKRDWGFAGDYVEAMWLM 237
Query: 303 VRDYIDVNDLVDA-----HVKALERAQPKKVGIYNVGTGKGRSVKEFVEACKKATSANIK 357
++ + +D V A V+ ++G+ GKG K S I
Sbjct: 238 LQQQ-EADDFVVATGETWSVREFAERVFARLGMPLEWQGKGGHEKGI-----DTNSGKIV 291
Query: 358 VIYEPR--RPGDYAEVYSDPTKIRLELNW 384
+ +PR RP + + DP K R +L W
Sbjct: 292 IEIDPRYFRPAEVDLLLGDPAKARRQLGW 320
>UNIPROTKB|P37759 [details] [associations]
symbol:rfbB "RmlB" species:83333 "Escherichia coli K-12"
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0019305 "dTDP-rhamnose biosynthetic process" evidence=IEA]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=ISS] [GO:0016829 "lyase activity" evidence=IEA]
[GO:0009103 "lipopolysaccharide biosynthetic process"
evidence=IEA;ISS] [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=IEA;ISS] [GO:0009243 "O antigen biosynthetic
process" evidence=IEA] InterPro:IPR001509 InterPro:IPR005888
Pfam:PF01370 UniPathway:UPA00124 UniPathway:UPA00281
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0009103 OMA:KWWSRVL EMBL:U09876
GO:GO:0045226 GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181
GO:GO:0019305 PIR:H64969 RefSeq:NP_416545.1 RefSeq:YP_490283.1
ProteinModelPortal:P37759 SMR:P37759 DIP:DIP-10680N IntAct:P37759
MINT:MINT-1302103 PRIDE:P37759 EnsemblBacteria:EBESCT00000003521
EnsemblBacteria:EBESCT00000014484 GeneID:12930685 GeneID:945276
KEGG:ecj:Y75_p2004 KEGG:eco:b2041 PATRIC:32119415 EchoBASE:EB2311
EcoGene:EG12412 HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
BioCyc:EcoCyc:DTDPGLUCDEHYDRAT-MONOMER
BioCyc:ECOL316407:JW2026-MONOMER
BioCyc:MetaCyc:DTDPGLUCDEHYDRAT-MONOMER Genevestigator:P37759
PANTHER:PTHR10366:SF41 Uniprot:P37759
Length = 361
Score = 146 (56.5 bits), Expect = 1.6e-11, Sum P(3) = 1.6e-11
Identities = 48/154 (31%), Positives = 79/154 (51%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
+LVTGGAG+IGS ++ ++ V VD L+ G + L ++ + R F +AD+
Sbjct: 3 ILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYA--GNRESLADV-SDSERYVFEHADI 59
Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH--GVD 189
DA A+ + F+++ DAVMH AA ++V S P + T V+LE+ + +D
Sbjct: 60 CDAPAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALD 119
Query: 190 T-------LIYSSTCATYGE---PEKMPITEETP 213
+ + ST YG+ P+++ TEE P
Sbjct: 120 SDKKNSFRFHHISTDEVYGDLPHPDEVNNTEELP 153
Score = 58 (25.5 bits), Expect = 1.6e-11, Sum P(3) = 1.6e-11
Identities = 12/50 (24%), Positives = 26/50 (52%)
Query: 204 EKMPI-TEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIG 252
E++P+ TE T AP +PY +K ++ ++ + + + ++ N G
Sbjct: 150 EELPLFTETTAYAPSSPYSASKASSDHLVRAWKRTYGLPTIVTNCSNNYG 199
Score = 57 (25.1 bits), Expect = 1.6e-11, Sum P(3) = 1.6e-11
Identities = 28/116 (24%), Positives = 45/116 (38%)
Query: 300 GTCVRDYIDVNDLVDAHVKALERAQPK-KVG-IYNVGT-GKGRSVKEFVEACK------- 349
G +RD++ V D H +AL + K G YN+G + +++ + C
Sbjct: 227 GDQIRDWLYVED----HARALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVP 282
Query: 350 KATSANIKVIYEPRRPGDYAEVYSDPTKIRLELNWTAKYTNLQESLEIAWRWQKSH 405
K S ++ Y RPG D KI L W + T + + W S+
Sbjct: 283 KEKSYREQITYVADRPGHDRRYAIDAEKIGRALGWKPQET-FESGIRKTVEWYLSN 337
>ZFIN|ZDB-GENE-020419-37 [details] [associations]
symbol:uxs1 "UDP-glucuronic acid decarboxylase 1"
species:7955 "Danio rerio" [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0051216 "cartilage
development" evidence=IMP] [GO:0001503 "ossification" evidence=IMP]
[GO:0030166 "proteoglycan biosynthetic process" evidence=IMP]
[GO:0030206 "chondroitin sulfate biosynthetic process"
evidence=IMP] [GO:0015012 "heparan sulfate proteoglycan
biosynthetic process" evidence=IGI;IMP] [GO:0030198 "extracellular
matrix organization" evidence=IGI;IMP] [GO:0050650 "chondroitin
sulfate proteoglycan biosynthetic process" evidence=IGI;IMP]
[GO:0016831 "carboxy-lyase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016829 "lyase activity" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0032580
"Golgi cisterna membrane" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 ZFIN:ZDB-GENE-020419-37 GO:GO:0016021
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0030198 GO:GO:0032580 GO:GO:0051216 GO:GO:0001503
GO:GO:0015012 GO:GO:0030206 GeneTree:ENSGT00530000063128
EMBL:AF506235 EMBL:BC074058 IPI:IPI00494152 RefSeq:NP_775349.1
UniGene:Dr.79684 ProteinModelPortal:Q6GMI9 SMR:Q6GMI9 STRING:Q6GMI9
Ensembl:ENSDART00000078525 GeneID:192315 KEGG:dre:192315 CTD:80146
HOGENOM:HOG000168004 HOVERGEN:HBG094144 InParanoid:Q6GMI9 KO:K08678
OrthoDB:EOG4ZW5B0 NextBio:20797152 ArrayExpress:Q6GMI9 Bgee:Q6GMI9
GO:GO:0048040 GO:GO:0033320 Uniprot:Q6GMI9
Length = 418
Score = 184 (69.8 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 59/192 (30%), Positives = 88/192 (45%)
Query: 67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQF 126
E+ +L+TGGAG++GSH +L+ D + VT+VDN G V E + +
Sbjct: 83 EKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNV----EHWIGHENFEL 138
Query: 127 IYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH 186
I D+ V + E D + H A+ A +P+K T TL +L R
Sbjct: 139 INHDV-----VEPLYIE--VDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRV 191
Query: 187 GVDTLIYSSTCATYGEPEKMPITEET--PQAPINP---YGKAKKMAEDIILDFSKNSDMA 241
G L+ +ST YG+PE P E+ PI P Y + K++AE + + K +
Sbjct: 192 GA-RLLLASTSEVYGDPEVHPQNEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVE 250
Query: 242 VMILRYFNVIGS 253
V + R FN GS
Sbjct: 251 VRVARIFNTFGS 262
>UNIPROTKB|B3KV61 [details] [associations]
symbol:UXS1 "UDP-glucuronate decarboxylase 1, isoform
CRA_a" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040
GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CH471127 GO:GO:0044237 EMBL:AC018878 HOVERGEN:HBG094144
GO:GO:0048040 IPI:IPI00658111 UniGene:Hs.469561 HGNC:HGNC:17729
EMBL:AK122696 SMR:B3KV61 STRING:B3KV61 Ensembl:ENST00000540130
Uniprot:B3KV61
Length = 363
Score = 181 (68.8 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 58/191 (30%), Positives = 88/191 (46%)
Query: 67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQF 126
E+ +L+TGGAG++GSH +L+ D + VT+VDN G V E + +
Sbjct: 28 EKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNV----EHWIGHENFEL 83
Query: 127 IYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH 186
I D+ V + E D + H A+ A +P+K T TL +L R
Sbjct: 84 INHDV-----VEPLYIE--VDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRV 136
Query: 187 GVDTLIYSSTCATYGEPEKMPITEET--PQAPINP---YGKAKKMAEDIILDFSKNSDMA 241
G L+ +ST YG+PE P +E+ PI P Y + K++AE + + K +
Sbjct: 137 GA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVE 195
Query: 242 VMILRYFNVIG 252
V + R FN G
Sbjct: 196 VRVARIFNTFG 206
>UNIPROTKB|F1PU61 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001509 InterPro:IPR021761
Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040 GO:GO:0005739
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 GO:GO:0048040 OMA:LGHENFE
EMBL:AAEX03007410 Ensembl:ENSCAFT00000003315 Uniprot:F1PU61
Length = 414
Score = 181 (68.8 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 58/191 (30%), Positives = 88/191 (46%)
Query: 67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQF 126
E+ +L+TGGAG++GSH +L+ D + VT+VDN G V E + +
Sbjct: 79 EKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNV----EHWIGHENFEL 134
Query: 127 IYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH 186
I D+ V + E D + H A+ A +P+K T TL +L R
Sbjct: 135 INHDV-----VEPLYIE--VDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRV 187
Query: 187 GVDTLIYSSTCATYGEPEKMPITEET--PQAPINP---YGKAKKMAEDIILDFSKNSDMA 241
G L+ +ST YG+PE P +E+ PI P Y + K++AE + + K +
Sbjct: 188 GA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVE 246
Query: 242 VMILRYFNVIG 252
V + R FN G
Sbjct: 247 VRVARIFNTFG 257
>UNIPROTKB|Q8NBZ7 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0032580 "Golgi cisterna membrane"
evidence=IEA] [GO:0033320 "UDP-D-xylose biosynthetic process"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 UniPathway:UPA00796 InterPro:IPR016040 GO:GO:0016021
GO:GO:0005739 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0032580 EMBL:AC018878 CTD:80146
HOGENOM:HOG000168004 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040
GO:GO:0033320 EMBL:AY147934 EMBL:AY358541 EMBL:AK027244
EMBL:AK075120 EMBL:AK075170 EMBL:BC009819 IPI:IPI00410544
IPI:IPI00657807 IPI:IPI00658111 RefSeq:NP_001240804.1
RefSeq:NP_001240805.1 RefSeq:NP_079352.2 UniGene:Hs.469561 PDB:2B69
PDB:4GLL PDBsum:2B69 PDBsum:4GLL ProteinModelPortal:Q8NBZ7
SMR:Q8NBZ7 IntAct:Q8NBZ7 STRING:Q8NBZ7 PhosphoSite:Q8NBZ7
DMDM:74730150 PaxDb:Q8NBZ7 PRIDE:Q8NBZ7 DNASU:80146
Ensembl:ENST00000283148 Ensembl:ENST00000409032
Ensembl:ENST00000409501 GeneID:80146 KEGG:hsa:80146 UCSC:uc002tdl.3
UCSC:uc002tdn.3 GeneCards:GC02M106709 H-InvDB:HIX0030285
HGNC:HGNC:17729 HPA:HPA008825 MIM:609749 neXtProt:NX_Q8NBZ7
PharmGKB:PA38465 OMA:LGHENFE EvolutionaryTrace:Q8NBZ7
GenomeRNAi:80146 NextBio:70422 ArrayExpress:Q8NBZ7 Bgee:Q8NBZ7
CleanEx:HS_UXS1 Genevestigator:Q8NBZ7 GermOnline:ENSG00000115652
Uniprot:Q8NBZ7
Length = 420
Score = 181 (68.8 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 58/191 (30%), Positives = 88/191 (46%)
Query: 67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQF 126
E+ +L+TGGAG++GSH +L+ D + VT+VDN G V E + +
Sbjct: 85 EKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNV----EHWIGHENFEL 140
Query: 127 IYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH 186
I D+ V + E D + H A+ A +P+K T TL +L R
Sbjct: 141 INHDV-----VEPLYIE--VDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRV 193
Query: 187 GVDTLIYSSTCATYGEPEKMPITEET--PQAPINP---YGKAKKMAEDIILDFSKNSDMA 241
G L+ +ST YG+PE P +E+ PI P Y + K++AE + + K +
Sbjct: 194 GA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVE 252
Query: 242 VMILRYFNVIG 252
V + R FN G
Sbjct: 253 VRVARIFNTFG 263
>MGI|MGI:1915133 [details] [associations]
symbol:Uxs1 "UDP-glucuronate decarboxylase 1" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016829 "lyase activity"
evidence=IEA] [GO:0016831 "carboxy-lyase activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=ISO] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 MGI:MGI:1915133 GO:GO:0016021 GO:GO:0005739
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0032580 GeneTree:ENSGT00530000063128 CTD:80146
HOVERGEN:HBG094144 KO:K08678 OrthoDB:EOG4ZW5B0 GO:GO:0048040
GO:GO:0033320 OMA:LGHENFE EMBL:AF399958 EMBL:AK075806 EMBL:AK152376
EMBL:BC037049 IPI:IPI00129252 RefSeq:NP_080706.1 UniGene:Mm.387202
ProteinModelPortal:Q91XL3 SMR:Q91XL3 STRING:Q91XL3
PhosphoSite:Q91XL3 PaxDb:Q91XL3 PRIDE:Q91XL3
Ensembl:ENSMUST00000126008 GeneID:67883 KEGG:mmu:67883
UCSC:uc007avq.1 InParanoid:Q91XL3 NextBio:325829 Bgee:Q91XL3
CleanEx:MM_UXS1 Genevestigator:Q91XL3 GermOnline:ENSMUSG00000057363
Uniprot:Q91XL3
Length = 420
Score = 181 (68.8 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 58/191 (30%), Positives = 88/191 (46%)
Query: 67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQF 126
E+ +L+TGGAG++GSH +L+ D + VT+VDN G V E + +
Sbjct: 85 EKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNV----EHWIGHENFEL 140
Query: 127 IYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH 186
I D+ V + E D + H A+ A +P+K T TL +L R
Sbjct: 141 INHDV-----VEPLYIE--VDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRV 193
Query: 187 GVDTLIYSSTCATYGEPEKMPITEET--PQAPINP---YGKAKKMAEDIILDFSKNSDMA 241
G L+ +ST YG+PE P +E+ PI P Y + K++AE + + K +
Sbjct: 194 GA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVE 252
Query: 242 VMILRYFNVIG 252
V + R FN G
Sbjct: 253 VRVARIFNTFG 263
>RGD|628680 [details] [associations]
symbol:Uxs1 "UDP-glucuronate decarboxylase 1" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0032580 "Golgi cisterna membrane" evidence=IEA] [GO:0033320
"UDP-D-xylose biosynthetic process" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IDA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 RGD:628680 GO:GO:0016021 GO:GO:0005794
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0032580
CTD:80146 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040 GO:GO:0033320
EMBL:AF482705 EMBL:BC086988 IPI:IPI00480702 RefSeq:NP_647552.1
UniGene:Rn.3037 ProteinModelPortal:Q5PQX0 SMR:Q5PQX0 PRIDE:Q5PQX0
GeneID:246232 KEGG:rno:246232 NextBio:623518 Genevestigator:Q5PQX0
Uniprot:Q5PQX0
Length = 420
Score = 181 (68.8 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 58/191 (30%), Positives = 88/191 (46%)
Query: 67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQF 126
E+ +L+TGGAG++GSH +L+ D + VT+VDN G V E + +
Sbjct: 85 EKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNV----EHWIGHENFEL 140
Query: 127 IYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH 186
I D+ V + E D + H A+ A +P+K T TL +L R
Sbjct: 141 INHDV-----VEPLYIE--VDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRV 193
Query: 187 GVDTLIYSSTCATYGEPEKMPITEET--PQAPINP---YGKAKKMAEDIILDFSKNSDMA 241
G L+ +ST YG+PE P +E+ PI P Y + K++AE + + K +
Sbjct: 194 GA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVE 252
Query: 242 VMILRYFNVIG 252
V + R FN G
Sbjct: 253 VRVARIFNTFG 263
>UNIPROTKB|Q5PQX0 [details] [associations]
symbol:Uxs1 "UDP-glucuronic acid decarboxylase 1"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803
UniPathway:UPA00796 InterPro:IPR016040 RGD:628680 GO:GO:0016021
GO:GO:0005794 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0032580 CTD:80146 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040
GO:GO:0033320 EMBL:AF482705 EMBL:BC086988 IPI:IPI00480702
RefSeq:NP_647552.1 UniGene:Rn.3037 ProteinModelPortal:Q5PQX0
SMR:Q5PQX0 PRIDE:Q5PQX0 GeneID:246232 KEGG:rno:246232
NextBio:623518 Genevestigator:Q5PQX0 Uniprot:Q5PQX0
Length = 420
Score = 181 (68.8 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 58/191 (30%), Positives = 88/191 (46%)
Query: 67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQF 126
E+ +L+TGGAG++GSH +L+ D + VT+VDN G V E + +
Sbjct: 85 EKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNV----EHWIGHENFEL 140
Query: 127 IYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH 186
I D+ V + E D + H A+ A +P+K T TL +L R
Sbjct: 141 INHDV-----VEPLYIE--VDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRV 193
Query: 187 GVDTLIYSSTCATYGEPEKMPITEET--PQAPINP---YGKAKKMAEDIILDFSKNSDMA 241
G L+ +ST YG+PE P +E+ PI P Y + K++AE + + K +
Sbjct: 194 GA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVE 252
Query: 242 VMILRYFNVIG 252
V + R FN G
Sbjct: 253 VRVARIFNTFG 263
>UNIPROTKB|E1BV28 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 CTD:80146 KO:K08678 GO:GO:0048040
OMA:LGHENFE EMBL:AADN02017868 IPI:IPI00574801 RefSeq:XP_416926.1
ProteinModelPortal:E1BV28 Ensembl:ENSGALT00000027123 GeneID:418728
KEGG:gga:418728 NextBio:20821874 Uniprot:E1BV28
Length = 421
Score = 180 (68.4 bits), Expect = 4.9e-11, P = 4.9e-11
Identities = 58/191 (30%), Positives = 87/191 (45%)
Query: 67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQF 126
E+ +L+TGGAG++GSH +L+ D + VT+VDN G V E + +
Sbjct: 86 EKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNV----EHWIGHENFEL 141
Query: 127 IYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH 186
I D+ V + E D + H A+ A +P+K T TL +L R
Sbjct: 142 INHDV-----VEPLYIE--VDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRV 194
Query: 187 GVDTLIYSSTCATYGEPEKMPITEET--PQAPINP---YGKAKKMAEDIILDFSKNSDMA 241
G L+ +ST YG+PE P E+ PI P Y + K++AE + + K +
Sbjct: 195 GA-RLLLASTSEVYGDPEVHPQNEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVE 253
Query: 242 VMILRYFNVIG 252
V + R FN G
Sbjct: 254 VRVARIFNTFG 264
>UNIPROTKB|P55293 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:562
"Escherichia coli" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AF125322
GO:GO:0009103 GO:GO:0045226 GO:GO:0009243 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
PANTHER:PTHR10366:SF41 PIR:S78542 ProteinModelPortal:P55293
SMR:P55293 PRIDE:P55293 SABIO-RK:P55293 Uniprot:P55293
Length = 361
Score = 145 (56.1 bits), Expect = 8.2e-11, Sum P(3) = 8.2e-11
Identities = 40/120 (33%), Positives = 63/120 (52%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
+LVTGGAG+IGS ++ ++ V VD L+ G ++ L E+ + R F AD+
Sbjct: 3 ILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYA--GNLESLAEI-SDSERYSFENADI 59
Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH--GVD 189
DA+ +F ++ DAVMH AA ++V S P + T V+LE+ + G+D
Sbjct: 60 CDAEGDGLYFGQHQLDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSGLD 119
Score = 60 (26.2 bits), Expect = 8.2e-11, Sum P(3) = 8.2e-11
Identities = 28/100 (28%), Positives = 39/100 (39%)
Query: 300 GTCVRDYIDVNDLVDAHVKALERAQPK-KVG-IYNVGTGKGRSVKEFV--------EACK 349
G +RD++ V D H +AL + K G YN+G + + V E
Sbjct: 227 GDQIRDWLYVED----HARALYTVVTEGKAGETYNIGGHNEKKNIDVVFTICDLLDEIVP 282
Query: 350 KATSANIKVIYEPRRPGDYAEVYSDPTKIRLELNWTAKYT 389
K S ++ Y RPG D KI EL W + T
Sbjct: 283 KEKSYREQITYVADRPGHDRRYAIDADKISRELGWKPQET 322
Score = 49 (22.3 bits), Expect = 8.2e-11, Sum P(3) = 8.2e-11
Identities = 10/44 (22%), Positives = 21/44 (47%)
Query: 209 TEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIG 252
TE T AP +PY +K ++ ++ + + + ++ N G
Sbjct: 156 TETTAYAPSSPYSASKASSDHLVRAWKRTYGLPTIVSNCSNNYG 199
>TIGR_CMR|BA_0507 [details] [associations]
symbol:BA_0507 "NAD-dependent epimerase/dehydratase family
protein" species:198094 "Bacillus anthracis str. Ames" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0044237 KO:K01784
HOGENOM:HOG000168004 HSSP:P32054 RefSeq:NP_843043.1
RefSeq:YP_017126.1 RefSeq:YP_026759.1 ProteinModelPortal:Q81YX3
DNASU:1087740 EnsemblBacteria:EBBACT00000010883
EnsemblBacteria:EBBACT00000018378 EnsemblBacteria:EBBACT00000021242
GeneID:1087740 GeneID:2816749 GeneID:2850006 KEGG:ban:BA_0507
KEGG:bar:GBAA_0507 KEGG:bat:BAS0479 OMA:IRWSYAV
ProtClustDB:CLSK915839 BioCyc:BANT260799:GJAJ-522-MONOMER
BioCyc:BANT261594:GJ7F-544-MONOMER Uniprot:Q81YX3
Length = 321
Score = 173 (66.0 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 56/185 (30%), Positives = 91/185 (49%)
Query: 74 LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD 133
L+TGGAG+IGSH A L+ Y VTIVDN +G K EL E ++ I + D
Sbjct: 6 LITGGAGFIGSHLAEELVGRGYNVTIVDNFYKGKN---KYHDELMKE---IRVIPISVLD 59
Query: 134 AKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIY 193
++ + +++ D V H AA+ V + ++ T +L++ A G +++
Sbjct: 60 KNSIYELVNQH--DVVFHLAAILGVKTTMEKSIELIETNFDGTRNILQA-ALKGKKKVVF 116
Query: 194 SSTCATYGEPEKMPITEETPQ-----APIN-PYGKAKKMAEDIILDFSKNSDMAVMILRY 247
+ST YG+ K P +EE + + I Y K + E + L ++ + V I+RY
Sbjct: 117 ASTSEVYGKA-KPPFSEEGDRLYGATSKIRWSYAICKTLEETLCLGYALEG-LPVTIVRY 174
Query: 248 FNVIG 252
FN+ G
Sbjct: 175 FNIYG 179
Score = 130 (50.8 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 69/275 (25%), Positives = 120/275 (43%)
Query: 144 NAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEP 203
N D V H AA+ V + ++ T +L++ A G ++++ST YG+
Sbjct: 68 NQHDVVFHLAAILGVKTTMEKSIELIETNFDGTRNILQA-ALKGKKKVVFASTSEVYGKA 126
Query: 204 EKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEG--RLGE 261
K P +EE + YG K+ + K + + L Y + P R
Sbjct: 127 -KPPFSEEGDRL----YGATSKIRWSYAI--CKTLE-ETLCLGY--ALEGLPVTIVRYFN 176
Query: 262 APRPELREHGRISGACFDAARGIIAGLKVKGTDYST-ADGTCVRDYIDVNDLVDAHVKAL 320
P ++ G +G R I A L+ G D DG R + V+D V+A ++A+
Sbjct: 177 IYGPRAKD-GPYAGVI---PRFISAALQ--GEDILVYGDGEQTRCFTYVSDAVEATIRAM 230
Query: 321 ERAQPKKVG-IYNVGTGKGRSVKEFVEACKKATSANIKVI---YEPRRPGDYAEVYS--- 373
+ K G I N+G+ +S+KE E KK T ++ K++ +E P + E+ +
Sbjct: 231 DE---KVNGEIINIGSENEKSIKEVAEVIKKLTDSSSKIVQVPFEEVYPHGFEEIPNRRP 287
Query: 374 DPTKIRLELNWTAKYTNLQESLEIAWRWQKSHRGG 408
D TK++ + + AK T ++ L+ +W + G
Sbjct: 288 DVTKLKDLVQFQAKVT-WEDGLKETIKWFREEDNG 321
>UNIPROTKB|C9JW33 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040
GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 EMBL:AC018878 HOGENOM:HOG000168004 GO:GO:0048040
HGNC:HGNC:17729 IPI:IPI00916527 ProteinModelPortal:C9JW33
SMR:C9JW33 STRING:C9JW33 Ensembl:ENST00000457835
ArrayExpress:C9JW33 Bgee:C9JW33 Uniprot:C9JW33
Length = 190
Score = 155 (59.6 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 53/175 (30%), Positives = 81/175 (46%)
Query: 67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQF 126
E+ +L+TGGAG++GSH +L+ D + VT+VDN G V E + +
Sbjct: 28 EKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNV----EHWIGHENFEL 83
Query: 127 IYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH 186
I D+ V + E D + H A+ A +P+K T TL +L R
Sbjct: 84 INHDV-----VEPLYIE--VDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRV 136
Query: 187 GVDTLIYSSTCATYGEPEKMPITEET--PQAPINP---YGKAKKMAEDIILDFSK 236
G L+ +ST YG+PE P +E+ PI P Y + K++AE + + K
Sbjct: 137 GA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMK 190
>UNIPROTKB|Q6MWV3 [details] [associations]
symbol:galE1 "UDP-glucose 4-epimerase" species:1773
"Mycobacterium tuberculosis" [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0040007 "growth" evidence=IMP] InterPro:IPR001509
Pfam:PF01370 UniPathway:UPA00214 InterPro:IPR016040 GO:GO:0005886
GO:GO:0040007 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:BX842583 GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 KO:K01784 PIR:C70562 RefSeq:NP_215015.2
RefSeq:NP_338283.1 RefSeq:YP_006517123.1 HSSP:P09147
ProteinModelPortal:Q6MWV3 SMR:Q6MWV3 PRIDE:Q6MWV3
EnsemblBacteria:EBMYCT00000000637 EnsemblBacteria:EBMYCT00000072644
GeneID:13317242 GeneID:885765 GeneID:926502 KEGG:mtu:Rv3634c
KEGG:mtv:RVBD_3634c PATRIC:18129967 PATRIC:18156681
TubercuList:Rv3634c HOGENOM:HOG000167994 OMA:HSVADPQ
ProtClustDB:CLSK881159 BioCyc:MetaCyc:MONOMER-15254 Uniprot:Q6MWV3
Length = 314
Score = 169 (64.5 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 60/192 (31%), Positives = 91/192 (47%)
Query: 74 LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD 133
LVTG AG+IGS RLL D + V +DN + G A L+ L + F+ AD+
Sbjct: 4 LVTGAAGFIGSTLVDRLLADGHSVVGLDNFATGR--ATN-LEHLADNSAHV-FVEADIVT 59
Query: 134 AKAVNKFFSENAFDAVMHFAAVAYVGESTLDP-LKYYHNITSNTLVVLESMARHGVDTLI 192
A ++ ++ + V H AA V S DP N+ T+ + E+ + GV ++
Sbjct: 60 AD-LHAILEQHRPEVVFHLAAQIDVRRSVADPQFDAAVNVIG-TVRLAEAARQTGVRKIV 117
Query: 193 YSSTCAT-YGEPEKMPITEETPQAPINPYGKAKKMAEDIILD-FSKNSDMAVMILRYFNV 250
++S+ + YG P + P E P P +PY A K+A +I L+ F + + NV
Sbjct: 118 HTSSGGSIYGTPPEYPTPETAPTDPASPYA-AGKVAGEIYLNTFRHLYGLDCSHIAPANV 176
Query: 251 IG--SDPEGRLG 260
G DP G G
Sbjct: 177 YGPRQDPHGEAG 188
>UNIPROTKB|P37761 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:485
"Neisseria gonorrhoeae" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
GO:GO:0045226 GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181
GO:GO:0019305 PANTHER:PTHR10366:SF41 EMBL:Z32742 EMBL:Z21508
PIR:S47045 ProteinModelPortal:P37761 SMR:P37761 Uniprot:P37761
Length = 346
Score = 169 (64.5 bits), Expect = 5.1e-10, P = 5.1e-10
Identities = 96/360 (26%), Positives = 153/360 (42%)
Query: 68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNI-GAVKVLQELFPEPGRLQF 126
EG ++LVTGGAG+IGS A +R + + R ++V NL + G ++ L ++ P R F
Sbjct: 4 EGKKNILVTGGAGFIGS-AVVRHIIQNTRDSVV-NLDKLTYAGNLESLTDIADNP-RYAF 60
Query: 127 IYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLES---- 182
D+ D +++ F++ DAVMH AA ++V + ++ T +LE+
Sbjct: 61 EQVDICDRAELDRVFAQYRPDAVMHLAAESHVDRAIGSAGEFIRTNIVGTFDLLEAARAY 120
Query: 183 ---MARHGVDTLIYS--STCATYGEPEKMP--ITEETPQAPINPYGKAKKMAEDIILDFS 235
M + + ST YG+ TE TP AP +PY +K A+ ++ +
Sbjct: 121 WQQMPSEKREAFRFHHISTDEVYGDLHGTDDLFTETTPYAPSSPYSASKAAADHLVRAWQ 180
Query: 236 KNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDY 295
+ + ++ N G PR + E I +A G L V G
Sbjct: 181 RTYRLPSIVSNCSNNYG----------PR-QFPEK-LIPLMILNALSG--KPLPVYG--- 223
Query: 296 STADGTCVRDYIDVNDLVDAHVKALERAQPKKV-G-IYNVGTGKGRSVKEFVEA-C---- 348
DG +RD++ V D H +AL + + V G YN+G ++ E V+ C
Sbjct: 224 ---DGAQIRDWLFVED----HARALYQVVTEGVVGETYNIGGHNEKTNLEVVKTICALLE 276
Query: 349 -----KKATSANIK--VIYEPRRPGDYAEVYSDPTKIRLELNWTAKYTNLQESLEIAWRW 401
K A A + + + RPG A D KIR +L W T + L +W
Sbjct: 277 ELAPEKPAGVARYEDLITFVQDRPGHDARYAVDAAKIRRDLGWLPLET-FESGLRKTVQW 335
>UNIPROTKB|Q9S642 [details] [associations]
symbol:rfbB1 "dTDP-glucose 4,6-dehydratase" species:122587
"Neisseria meningitidis Z2491" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
OMA:RAYRQQM EMBL:AL157959 GenomeReviews:AL157959_GR GO:GO:0045226
GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088
GO:GO:0019305 HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
EMBL:AF083467 PIR:G82014 RefSeq:YP_002341735.1
RefSeq:YP_002341747.1 ProteinModelPortal:Q9S642 SMR:Q9S642
EnsemblBacteria:EBNEIT00000000158 EnsemblBacteria:EBNEIT00000001121
GeneID:906204 GeneID:906218 KEGG:nma:NMA0189 KEGG:nma:NMA0204
PATRIC:20360960 ProtClustDB:CLSK877380
BioCyc:NMEN122587:GI3Q-220-MONOMER
BioCyc:NMEN122587:GI3Q-233-MONOMER Uniprot:Q9S642
Length = 341
Score = 145 (56.1 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 48/192 (25%), Positives = 88/192 (45%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
+LVTGGAG+IGS +++++ V +D L+ G ++ L ++ P R F D+
Sbjct: 4 ILVTGGAGFIGSAVVRHIIRNTQDSVVNLDKLTYA--GNLESLTDIADNP-RYAFEQVDI 60
Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMA------- 184
D +++ F+++ DAVMH AA ++V S ++ T +LE+
Sbjct: 61 CDRAELDRVFAQHRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAARAYRQQMP 120
Query: 185 --RHGVDTLIYSSTCATYGEPEKMP--ITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
+H + ST YG+ TE P AP +PY +K ++ ++ + + +
Sbjct: 121 SEKHEAFRFHHISTDEVYGDLSGTDDLFTETAPYAPSSPYSASKASSDHLVRAWLRTYGL 180
Query: 241 AVMILRYFNVIG 252
++ N G
Sbjct: 181 PTIVTNCSNNYG 192
Score = 65 (27.9 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 33/117 (28%), Positives = 49/117 (41%)
Query: 299 DGTCVRDYIDVNDLVDAHVKALERAQPKKV-G-IYNVGTGKGRSVKEFVEA-C------- 348
DG +RD++ V D H +AL + + V G YN+G ++ E V+ C
Sbjct: 219 DGMQIRDWLFVED----HARALYQVVTEGVVGETYNIGGHNEKANIEVVKTICALLEELA 274
Query: 349 --KKATSANIK--VIYEPRRPGDYAEVYSDPTKIRLELNWTAKYTNLQESLEIAWRW 401
K A A + + + RPG A D KIR +L W T + L +W
Sbjct: 275 PEKPAGVARYEDLITFVQDRPGHDARYAVDTAKIRRDLGWQPLET-FESGLRKTVQW 330
>UNIPROTKB|F1P299 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0007219 "Notch signaling
pathway" evidence=ISS] [GO:0042351 "'de novo' GDP-L-fucose
biosynthetic process" evidence=ISS] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0019673 "GDP-mannose
metabolic process" evidence=ISS] [GO:0070401 "NADP+ binding"
evidence=ISS] InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 GO:GO:0008446
TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640 OMA:IAYNLTD
EMBL:AADN02036511 EMBL:AADN02036512 EMBL:AADN02036513
EMBL:AADN02036514 EMBL:AADN02036515 EMBL:AADN02036516
EMBL:AADN02036517 EMBL:AADN02036518 IPI:IPI00578850
Ensembl:ENSGALT00000020945 Uniprot:F1P299
Length = 358
Score = 169 (64.5 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 83/331 (25%), Positives = 149/331 (45%)
Query: 74 LVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNIGAVKVLQELFPE--PGRLQFIYAD 130
L+TG G GS+ A LL+ Y V IV S N G ++ L + G ++ Y D
Sbjct: 13 LITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNSQAHIEGNMKLHYGD 72
Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITS-NTLVVLESMARHGVD 189
L D+ + K +E + + + A ++V + + D +Y ++ TL +L+++ G+
Sbjct: 73 LTDSTCLVKIINEVKPNEIYNLGAQSHV-KISFDLAEYTADVDGVGTLRLLDAIKTCGLI 131
Query: 190 TLI--Y-SSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILR 246
+ Y +ST +G+ +++P E TP P +PYG AK A I+++F + ++ +
Sbjct: 132 NSVKFYQASTSELFGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGI 191
Query: 247 YFNVIGSDPEGRLGEAPRPELREHGRISGACFDA-ARGIIAGLKVKG--TDYSTADGTCV 303
FN P R R +I D+ + G + + G DY A +
Sbjct: 192 LFN--HESPRRGANFVTRKISRSVAKIHLGQMDSFSLGNLDAKRDWGHARDYVEAMWLML 249
Query: 304 R-----DYIDVNDLVDAHVKALERAQPKKVGIYNVGTGKGRSVKEFVEACKKATSANIKV 358
+ D++ V + + +E++ K +G V GK + V CK+ ++ V
Sbjct: 250 QTDEPEDFVIATGEVHSVREFVEKSF-KHIGKTIVWEGKNENE---VGRCKETGKIHVTV 305
Query: 359 IYEPRRPGDYAEVYSDPTKIRLELNWTAKYT 389
++ RP + + D TK R +LNW + T
Sbjct: 306 NHKYYRPTEVDFLQGDCTKARQKLNWKPRVT 336
>TIGR_CMR|SO_3188 [details] [associations]
symbol:SO_3188 "dTDP-glucose 4,6-dehydratase"
species:211586 "Shewanella oneidensis MR-1" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0008460
HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
PANTHER:PTHR10366:SF41 HSSP:P26391 RefSeq:NP_718744.1
ProteinModelPortal:Q8ECF4 SMR:Q8ECF4 GeneID:1170881
KEGG:son:SO_3188 PATRIC:23526058 OMA:NAARATW Uniprot:Q8ECF4
Length = 375
Score = 123 (48.4 bits), Expect = 6.2e-10, Sum P(3) = 6.2e-10
Identities = 37/115 (32%), Positives = 57/115 (49%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSYRVTI-VDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
+LVTGGAG+IGS ++ ++ + VD L+ G ++ L + P R F D+
Sbjct: 3 ILVTGGAGFIGSAVVRHIIGNTQDCVVNVDKLTYA--GNLESLTSVADSP-RYTFEKVDI 59
Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH 186
D + + FS + DAVMH AA ++V S + T +LE+ ARH
Sbjct: 60 CDRTELERVFSLHQPDAVMHLAAESHVDRSITGSADFIQTNIVGTYTLLEA-ARH 113
Score = 75 (31.5 bits), Expect = 6.2e-10, Sum P(3) = 6.2e-10
Identities = 32/112 (28%), Positives = 47/112 (41%)
Query: 300 GTCVRDYIDVNDLVDAHVKALERAQPK-KVG-IYNVGTGKGRSVKEFVEA-CK------- 349
G +RD++ V D H +AL + + KVG YN+G + E V+ C
Sbjct: 245 GDQIRDWLYVED----HARALFKVVTEGKVGETYNIGGHNEKRNLEVVQTICSILDSLVP 300
Query: 350 KATSANIKVIYEPRRPGDYAEVYSDPTKIRLELNWTAKYTNLQESLEIAWRW 401
K T ++ Y RPG D TK+ EL+W + T + L W
Sbjct: 301 KNTPYAEQIAYVADRPGHDRRYAIDATKMSAELDWQPQET-FETGLRKTVEW 351
Score = 52 (23.4 bits), Expect = 6.2e-10, Sum P(3) = 6.2e-10
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 206 MPI-TEETPQAPINPYGKAKKMAEDII 231
+P+ TE TP P +PY +K ++ ++
Sbjct: 170 LPLFTETTPYTPSSPYSASKASSDHLV 196
>UNIPROTKB|B5XE59 [details] [associations]
symbol:GMDS "GDP-mannose 4,6 dehydratase" species:8030
"Salmo salar" [GO:0005575 "cellular_component" evidence=ND]
[GO:0007219 "Notch signaling pathway" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS] [GO:0019673
"GDP-mannose metabolic process" evidence=ISS] [GO:0042351 "'de
novo' GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0070401
"NADP+ binding" evidence=ISS] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0005622 GO:GO:0070401 GO:GO:0019673 GO:GO:0042351
GO:GO:0008446 TIGRFAMs:TIGR01472 HOVERGEN:HBG000727 CTD:2762
EMBL:BT049328 RefSeq:NP_001134845.1 UniGene:Ssa.6439
ProteinModelPortal:B5XE59 GeneID:100196344 Uniprot:B5XE59
Length = 370
Score = 168 (64.2 bits), Expect = 8.1e-10, P = 8.1e-10
Identities = 85/332 (25%), Positives = 146/332 (43%)
Query: 74 LVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNIGAVKVLQELFPEP---GRLQFIYA 129
++TG G GS+ A LL+ Y V I+ S N G ++ L + P+ G ++ Y
Sbjct: 25 VITGITGQDGSYLAEFLLEKGYEVHGILRRSSSFNTGRIEHLYQN-PQTHTEGNMKLHYG 83
Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITS-NTLVVLESMARHGV 188
DL D+ + K ++ + + A ++V + + + +Y N+ TL +L+++ G+
Sbjct: 84 DLTDSTCLVKIINQVKPTEIYNLGAQSHV-KISFELAEYTANVDGVGTLRLLDAIKTCGL 142
Query: 189 DTLI--Y-SSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMIL 245
+ Y +ST YG+ +++P E TP P +PYG AK A I+++F + ++ +
Sbjct: 143 TNSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNG 202
Query: 246 RYFNVIGSDPEGRLGEAPRPELREHGRIS-GACFDAARGIIAGLKVKG--TDYSTADGTC 302
FN P R R +I G + G + + G DY A
Sbjct: 203 ILFN--HESPRRGANFVTRKISRSVAKIHLGQLESFSLGNLDSKRDWGHAKDYVEAMWLM 260
Query: 303 VRDYIDVNDLV----DAH-VKALERAQPKKVGIYNVGTGKGRSVKEFVEACKKATSANIK 357
++ + DLV + H V+ K VG V GK + V C++ ++K
Sbjct: 261 LQQE-EPEDLVIATGEVHSVREFVEKSFKHVGKTIVWEGKDENE---VGRCQETGVIHVK 316
Query: 358 VIYEPRRPGDYAEVYSDPTKIRLELNWTAKYT 389
V + RP + + D TK +L W AK T
Sbjct: 317 VDSKYYRPTEVEYLQGDSTKALTKLGWKAKIT 348
>UNIPROTKB|P55294 [details] [associations]
symbol:rfbB1 "dTDP-glucose 4,6-dehydratase" species:122586
"Neisseria meningitidis MC58" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
EMBL:AE002098 GenomeReviews:AE002098_GR GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
ProtClustDB:CLSK877380 EMBL:L09188 PIR:G81242 PIR:S42431
RefSeq:NP_273127.1 RefSeq:NP_273142.1 ProteinModelPortal:P55294
SMR:P55294 EnsemblBacteria:EBNEIT00000009034
EnsemblBacteria:EBNEIT00000009474 GeneID:902170 GeneID:902183
KEGG:nme:NMB0063 KEGG:nme:NMB0079 PATRIC:20355131 OMA:ARSWWNT
BioCyc:NMEN122586:GHGG-64-MONOMER BioCyc:NMEN122586:GHGG-80-MONOMER
Uniprot:P55294
Length = 355
Score = 144 (55.7 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 49/192 (25%), Positives = 87/192 (45%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSYRVTI-VDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
+LVTGGAG+IGS +++++ + VD L+ G ++ L E+ P R F D+
Sbjct: 4 ILVTGGAGFIGSAVVRHIIRNTRDAVVNVDKLTYA--GNLESLTEVADNP-RYAFEQVDI 60
Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMA------- 184
D +++ F++ DAVMH AA ++V S ++ T +LE+
Sbjct: 61 CDRAELDRVFAQYRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAARAYWQQMP 120
Query: 185 --RHGVDTLIYSSTCATYGEPEKMP--ITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
+H + ST YG+ TE P AP +PY +K ++ ++ + + +
Sbjct: 121 SEQHEAFRFHHISTDEVYGDLGGTDDLFTETAPYAPSSPYSASKASSDHLVRAWLRTYGL 180
Query: 241 AVMILRYFNVIG 252
++ N G
Sbjct: 181 PTIVTNCSNNYG 192
Score = 64 (27.6 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 32/129 (24%), Positives = 54/129 (41%)
Query: 299 DGTCVRDYIDVNDLVDAHVKALERAQPKKV-G-IYNVGTGKGRSVKEFVEA-C------- 348
DG +RD++ V D H +AL + + V G YN+G ++ E V+ C
Sbjct: 219 DGMQIRDWLFVED----HARALYQVVTEGVVGETYNIGGHNEKANIEVVKTICALLEELA 274
Query: 349 --KKATSANIK--VIYEPRRPGDYAEVYSDPTKIRLELNWTAKYTNLQESLEIAWRWQKS 404
K A A + + + RPG D KIR +L W T + L +W
Sbjct: 275 PEKPAGVARYEDLITFVQDRPGHDVRYAVDAAKIRRDLGWLPLET-FESGLRKTVQWYLD 333
Query: 405 HRGGYASII 413
++ + +++
Sbjct: 334 NKTWWQNVL 342
>UNIPROTKB|O53634 [details] [associations]
symbol:gca "POSSIBLE GDP-MANNOSE 4,6-DEHYDRATASE GCA
(GDP-D-MANNOSE DEHYDRATASE)" species:83332 "Mycobacterium
tuberculosis H37Rv" [GO:0040007 "growth" evidence=IMP]
InterPro:IPR001509 InterPro:IPR020904 Pfam:PF01370 PROSITE:PS00061
InterPro:IPR016040 GO:GO:0040007 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0016491 EMBL:BX842572 GO:GO:0044237
GO:GO:0055114 KO:K01711 GO:GO:0008446 HOGENOM:HOG000167992
HSSP:P32054 EMBL:CP003248 PIR:C70840 RefSeq:NP_214626.1
RefSeq:NP_334530.1 RefSeq:YP_006513430.1 SMR:O53634 DNASU:886907
EnsemblBacteria:EBMYCT00000003264 EnsemblBacteria:EBMYCT00000070103
GeneID:13316094 GeneID:886907 GeneID:922974 KEGG:mtc:MT0121
KEGG:mtu:Rv0112 KEGG:mtv:RVBD_0112 PATRIC:18121990
TubercuList:Rv0112 OMA:CSGVATR ProtClustDB:CLSK790272
Uniprot:O53634
Length = 318
Score = 164 (62.8 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 84/338 (24%), Positives = 139/338 (41%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
V +TG G +GSH A LL + V R I +P LQF A++
Sbjct: 3 VWITGAGGMMGSHLAEMLLAAGHDVYAT--YCRPTI-----------DPSDLQFNGAEVD 49
Query: 133 DAKAVNKFFSENAF--DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT 190
+ + S F DAV H AA +Y S P++ T +V E++ R
Sbjct: 50 ITDWCSVYDSIATFRPDAVFHLAAQSYPAVSWARPVETLTTNMVGTAIVFEALRRVRPHA 109
Query: 191 -LIYSSTCATYG--EPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRY 247
+I + + A YG +P ++PI E P++PYG +K + + + K+ M ++ R
Sbjct: 110 KIIVAGSSAEYGFVDPSEVPINERRELRPLHPYGVSKAATDMLAYQYHKSYGMHTVVARI 169
Query: 248 FNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRDYI 307
FN G P ++G+A +R + +A + LK K R +
Sbjct: 170 FNCTG--PR-KVGDALSDFVRRCTWLEHHPEQSAIRV-GNLKTK------------RTIV 213
Query: 308 DVNDLVDAHVKALERAQPK---KVGIYNVGTGKGRSVKEFVEACKKATSANIKVIYEPRR 364
DV DL A + L++ + VG ++ G +K+ + ACK+ +V R
Sbjct: 214 DVRDLNRALMLMLDKGEAGADYNVG-GSIAYEMGDVLKQVIAACKRDDIVP-EVDPALLR 271
Query: 365 PGDYAEVYSDPTKIRLELNWTAKYTNLQESLEIAWRWQ 402
P D +Y D +K+ W + Q ++ W+
Sbjct: 272 PTDEKIIYGDCSKLAAITGWQQEICLTQTIADMFDYWR 309
>UNIPROTKB|Q9HTB6 [details] [associations]
symbol:rmd "GDP-6-deoxy-D-mannose reductase" species:208964
"Pseudomonas aeruginosa PAO1" [GO:0033705
"GDP-4-dehydro-6-deoxy-D-mannose reductase activity" evidence=IDA]
[GO:0055114 "oxidation-reduction process" evidence=IDA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 PseudoCAP:PA5454
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
EMBL:AE004091 GenomeReviews:AE004091_GR GO:GO:0033705 EMBL:AF009955
PIR:H82964 RefSeq:NP_254141.1 HSSP:P27830 ProteinModelPortal:Q9HTB6
SMR:Q9HTB6 GeneID:883037 KEGG:pae:PA5454 PATRIC:19845791
HOGENOM:HOG000167992 OMA:NLLEACA ProtClustDB:CLSK869364
Uniprot:Q9HTB6
Length = 304
Score = 161 (61.7 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 61/212 (28%), Positives = 95/212 (44%)
Query: 117 LFPEPGRLQFIYAD-LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSN 175
L P P R + D LGD + E DAV+H A YV E+ DP +
Sbjct: 31 LLPVPHRYDLLEPDSLGD------LWPELP-DAVIHLAGQTYVPEAFRDPARTLQINLLG 83
Query: 176 TLVVLESMARHGVD-TLIYSSTCATYGEPEK--MPITEETPQAPINPYGKAKKMAEDIIL 232
TL +L+++ G T +Y S+ YG+ + +PI EE P NPY +K AE + L
Sbjct: 84 TLNLLQALKARGFSGTFLYISSGDVYGQVAEAALPIHEELIPHPRNPYAVSKLAAESLCL 143
Query: 233 DFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKG 292
+ V++ R FN IG P ++ I+ A AR + GL+
Sbjct: 144 QWGITEGWRVLVARPFNHIG------------PGQKDSFVIASAARQIAR-MKQGLQANR 190
Query: 293 TDYSTADGTCVRDYIDVNDLVDAHVKALERAQ 324
+ D + RD++DV D++ A+++ L +
Sbjct: 191 LEVGDIDVS--RDFLDVQDVLSAYLRLLSHGE 220
Score = 141 (54.7 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 58/265 (21%), Positives = 110/265 (41%)
Query: 147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSSTCATYGEPEK 205
DAV+H A YV E+ DP + TL +L+++ G T +Y S+ YG+ +
Sbjct: 55 DAVIHLAGQTYVPEAFRDPARTLQINLLGTLNLLQALKARGFSGTFLYISSGDVYGQVAE 114
Query: 206 MPITEETPQAPINPYGK--AKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAP 263
+ P +P K+A + + + I + V+ + P +G
Sbjct: 115 AALPIHEELIP-HPRNPYAVSKLAAESLC-------LQWGITEGWRVLVARPFNHIG--- 163
Query: 264 RPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRDYIDVNDLVDAHVKALERA 323
P ++ I+ A AR + GL+ + D + RD++DV D++ A+++ L
Sbjct: 164 -PGQKDSFVIASAARQIAR-MKQGLQANRLEVGDIDVS--RDFLDVQDVLSAYLRLLSHG 219
Query: 324 QPKKVGIYNVGTGKGRSVKEFVEACKKATSANIKVIYEPRRP--GDYAEVYSDPTKIRLE 381
+ V YNV +G+ + ++E +E ++++ +P R + V ++
Sbjct: 220 EAGAV--YNVCSGQEQKIRELIELLADIAQVELEIVQDPARMRRAEQRRVRGSHARLHDT 277
Query: 382 LNWTAKYTNLQESLEIAWRWQKSHR 406
W + T Q I W+ R
Sbjct: 278 TGWKPEITIKQSLRAILSDWESRVR 302
Score = 39 (18.8 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 6/13 (46%), Positives = 10/13 (76%)
Query: 73 VLVTGGAGYIGSH 85
+ VTG +G++G H
Sbjct: 5 LFVTGLSGFVGKH 17
>UNIPROTKB|P27830 [details] [associations]
symbol:rffG "dTDP-glucose 4,6-dehydratase 2" species:83333
"Escherichia coli K-12" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0019305 "dTDP-rhamnose biosynthetic process" evidence=IEA]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=IDA] [GO:0009103 "lipopolysaccharide biosynthetic process"
evidence=IEA;IDA] [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=IEA;IDA] [GO:0009243 "O antigen biosynthetic
process" evidence=IEA] InterPro:IPR001509 InterPro:IPR005888
Pfam:PF01370 UniPathway:UPA00124 UniPathway:UPA00281
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0009103 EMBL:M87049 OMA:RAYRQQM
GO:GO:0045226 GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181
eggNOG:COG1088 GO:GO:0019305 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 PIR:G65182 RefSeq:YP_026255.1
RefSeq:YP_491651.1 PDB:1BXK PDBsum:1BXK ProteinModelPortal:P27830
SMR:P27830 PRIDE:P27830 EnsemblBacteria:EBESCT00000002573
EnsemblBacteria:EBESCT00000015511 GeneID:12933083 GeneID:948300
KEGG:ecj:Y75_p3387 KEGG:eco:b3788 PATRIC:32123069 EchoBASE:EB1422
EcoGene:EG11453 ProtClustDB:PRK10217
BioCyc:EcoCyc:DTDPGLUCDEHYDRAT2-MONOMER
BioCyc:ECOL316407:JW5598-MONOMER
BioCyc:MetaCyc:DTDPGLUCDEHYDRAT2-MONOMER EvolutionaryTrace:P27830
Genevestigator:P27830 Uniprot:P27830
Length = 355
Score = 162 (62.1 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 93/368 (25%), Positives = 150/368 (40%)
Query: 73 VLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLS-RGNIGAVKVLQELFPEPGRLQFIYAD 130
+L+TGGAG+IGS ++ + S V +VD L+ GN+ ++ + + R F D
Sbjct: 4 ILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQ----SERFAFEKVD 59
Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT 190
+ D + + F+E+ D VMH AA ++V S P + T +LE+ AR +
Sbjct: 60 ICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEA-ARAYWNA 118
Query: 191 LI----------YSSTCATYGEPEKMP--ITEETPQAPINPYGKAKKMAEDIILDFSKNS 238
L + ST YG+ TE TP AP +PY +K ++ ++ + +
Sbjct: 119 LTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTY 178
Query: 239 DMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTA 298
+ +I N G PE I +A G L V G
Sbjct: 179 GLPTLITNCSN--------NYGPYHFPEKL----IPLMILNALAG--KSLPVYG------ 218
Query: 299 DGTCVRDYIDVNDLVDAHVKALER-AQPKKVG-IYNVGTGKGRSVKEFVEA-C------- 348
+G +RD++ V D H +AL A KVG YN+G R + VE C
Sbjct: 219 NGQQIRDWLYVED----HARALYCVATTGKVGETYNIGGHNERKNLDVVETICELLEELA 274
Query: 349 --KKATSANIK--VIYEPRRPGDYAEVYSDPTKIRLELNWTAKYTNLQESLEIAWRWQKS 404
K A+ + + + RPG D +KI EL W + T + + +W +
Sbjct: 275 PNKPHGVAHYRDLITFVADRPGHDLRYAIDASKIARELGWLPQET-FESGMRKTVQWYLA 333
Query: 405 HRGGYASI 412
+ + +
Sbjct: 334 NESWWKQV 341
>TAIR|locus:2081675 [details] [associations]
symbol:AUD1 "AT3G62830" species:3702 "Arabidopsis
thaliana" [GO:0003824 "catalytic activity" evidence=ISS]
[GO:0005794 "Golgi apparatus" evidence=ISM;IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0019305
"dTDP-rhamnose biosynthetic process" evidence=ISS] [GO:0016020
"membrane" evidence=TAS] [GO:0042732 "D-xylose metabolic process"
evidence=IDA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IDA] [GO:0000139 "Golgi membrane" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0005768 "endosome" evidence=IDA] [GO:0005802
"trans-Golgi network" evidence=IDA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0005886 EMBL:CP002686 GO:GO:0000139
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005768
EMBL:AL162651 GO:GO:0005802 GO:GO:0042732 GO:GO:0008460
GO:GO:0019305 GO:GO:0048040 OMA:FSEALIM UniGene:At.23561
UniGene:At.27002 UniGene:At.63633 EMBL:AY143897 IPI:IPI00539694
PIR:T48072 RefSeq:NP_001118893.1 RefSeq:NP_191842.1
ProteinModelPortal:Q9LZI2 SMR:Q9LZI2 PRIDE:Q9LZI2
EnsemblPlants:AT3G62830.1 EnsemblPlants:AT3G62830.2 GeneID:825458
KEGG:ath:AT3G62830 TAIR:At3g62830 InParanoid:Q9LZI2
PhylomeDB:Q9LZI2 ProtClustDB:PLN02206 Genevestigator:Q9LZI2
Uniprot:Q9LZI2
Length = 445
Score = 162 (62.1 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 57/186 (30%), Positives = 83/186 (44%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
V+VTGGAG++GSH RL+ V +VDN G V+ F P + I D+
Sbjct: 121 VVVTGGAGFVGSHLVDRLMARGDTVIVVDNFFTGR--KENVMHH-FSNPN-FEMIRHDV- 175
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
V E D + H A A +P+K TL +L R G L+
Sbjct: 176 ----VEPILLE--VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLL 229
Query: 193 YSSTCATYGEPEKMPITEETPQAPINP------YGKAKKMAEDIILDFSKNSDMAVMILR 246
+ST YG+P + P E T +NP Y + K+ AE + +D+ + +++ V I R
Sbjct: 230 -TSTSEVYGDPLQHPQVE-TYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANVEVRIAR 287
Query: 247 YFNVIG 252
FN G
Sbjct: 288 IFNTYG 293
>UNIPROTKB|Q8AVI1 [details] [associations]
symbol:gmds "Gmds-prov protein" species:8355 "Xenopus
laevis" [GO:0005575 "cellular_component" evidence=ND] [GO:0007219
"Notch signaling pathway" evidence=ISS] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0019673 "GDP-mannose
metabolic process" evidence=ISS] [GO:0042351 "'de novo'
GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0070401 "NADP+
binding" evidence=ISS] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0005622 GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 KO:K01711
GO:GO:0008446 TIGRFAMs:TIGR01472 HOVERGEN:HBG000727 CTD:2762
HSSP:P32054 EMBL:BC042270 EMBL:BC111472 RefSeq:NP_001080352.1
UniGene:Xl.10260 SMR:Q8AVI1 GeneID:380044 KEGG:xla:380044
Xenbase:XB-GENE-943021 Uniprot:Q8AVI1
Length = 369
Score = 160 (61.4 bits), Expect = 6.5e-09, P = 6.5e-09
Identities = 83/332 (25%), Positives = 147/332 (44%)
Query: 74 LVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNIGAVKVLQELFPEP-----GRLQFI 127
L+TG G GS+ A LL+ Y V IV S N G + + L+ P G ++
Sbjct: 24 LITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRI---EHLYKNPHAHTEGNMKLH 80
Query: 128 YADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITS-NTLVVLESMARH 186
Y DL D+ + K +E + + A ++V + + D +Y ++ TL +L++
Sbjct: 81 YGDLTDSTCLVKIINEVKPTEIYNLGAQSHV-KISFDLAEYTADVDGLGTLRLLDATKTC 139
Query: 187 G-VDTLIY--SSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVM 243
G ++T+ + +ST YG+ +++P E TP P +PYG AK A I+++F + ++ +
Sbjct: 140 GLINTVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAV 199
Query: 244 ILRYFNVIGSDPEGRLGEAPRPELREHGRIS-GACFDAARGIIAGLKVKG--TDYSTADG 300
FN P R R +I G + G + + G DY A
Sbjct: 200 NGILFN--HESPRRGANFVTRKISRSVAKIHLGQMESFSLGNLDAKRDWGHAKDYVEAMW 257
Query: 301 TCVR-----DYIDVNDLVDAHVKALERAQPKKVGIYNVGTGKGRSVKEFVEACKKATSAN 355
++ D++ V + + +E+A K +G V GK + V C + +
Sbjct: 258 LMLQTDEPEDFVISTGEVHSVREFVEKAF-KHIGKTIVWEGKNENE---VGRCSETGKIH 313
Query: 356 IKVIYEPRRPGDYAEVYSDPTKIRLELNWTAK 387
+KV + RP + + D ++ + +L WT K
Sbjct: 314 VKVDLKYYRPTEVDFLQGDCSQAKNKLGWTPK 345
>TIGR_CMR|GSU_1815 [details] [associations]
symbol:GSU_1815 "NAD-dependent epimerase/dehydratase
family protein" species:243231 "Geobacter sulfurreducens PCA"
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016829 "lyase activity" evidence=ISS] [GO:0016857 "racemase
and epimerase activity, acting on carbohydrates and derivatives"
evidence=ISS] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0044237 KO:K01710
HOGENOM:HOG000168004 OMA:LGHENFE RefSeq:NP_952865.1
ProteinModelPortal:Q74C60 GeneID:2686299 KEGG:gsu:GSU1815
PATRIC:22026487 ProtClustDB:CLSK828578
BioCyc:GSUL243231:GH27-1866-MONOMER Uniprot:Q74C60
Length = 311
Score = 158 (60.7 bits), Expect = 6.8e-09, P = 6.8e-09
Identities = 52/196 (26%), Positives = 92/196 (46%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
+LVTGGAG+IGSH RLL+ + V +DN G+ + L + R + I D+
Sbjct: 3 ILVTGGAGFIGSHLCERLLEQGHDVLCLDNFFTGSKRNIDRLMDFH----RFEVIRHDI- 57
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
+ E D + + A A +P+K T+ +L +A+ ++
Sbjct: 58 ----IEPILLE--VDRIYNLACPASPVHYQYNPVKTIKTSVMGTINML-GLAKRVRARIL 110
Query: 193 YSSTCATYGEPEKMPITEETPQAPINP------YGKAKKMAEDIILDFSKNSDMAVMILR 246
+ST YG+P P E+ +NP Y + K++AE +++D+ + + + + I R
Sbjct: 111 QASTSEVYGDPTIHP-QPESYWGNVNPIGIRSCYDEGKRVAETLLMDYHRQNGVDIRIAR 169
Query: 247 YFNVIG---SDPEGRL 259
FN G ++ +GR+
Sbjct: 170 IFNTYGPRMAEHDGRV 185
Score = 125 (49.1 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 64/253 (25%), Positives = 102/253 (40%)
Query: 147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKM 206
D + + A A +P+K T+ +L +A+ ++ +ST YG+P
Sbjct: 66 DRIYNLACPASPVHYQYNPVKTIKTSVMGTINML-GLAKRVRARILQASTSEVYGDPTIH 124
Query: 207 PITEETPQAPINPYGKAKKMAEDIILDFSKNSDMA-VMILRYFNVIGSDPE-GRLGEAPR 264
P E+ +NP G I + + +A +++ Y G D R+
Sbjct: 125 P-QPESYWGNVNPIG--------IRSCYDEGKRVAETLLMDYHRQNGVDIRIARIFNTYG 175
Query: 265 PELREH-GRI-SGACFDAARGIIAGLKVKGTDYSTADGTCVRDYIDVNDLVDAHVKALER 322
P + EH GR+ S A RG L V G DG+ R + V+DL+D V +E
Sbjct: 176 PRMAEHDGRVVSNFVVQALRG--EDLTVYG------DGSQTRSFCYVDDLLDGLVTLMEH 227
Query: 323 AQPKKVGIYNVGTGKGRSVKEFVEACKKATSANIKVIYEPRRPGDYAEVYSDPTKIRLEL 382
Q G N+G + + EF T ++ ++IY P D + D T R L
Sbjct: 228 DQ--FCGPVNLGNPEETPIIEFARRIIAMTGSSSQIIYRPLPSDDPRQRQPDITLARTIL 285
Query: 383 NWTAKYTNLQESL 395
W + +L E L
Sbjct: 286 GWEPR-VSLDEGL 297
>UNIPROTKB|O60547 [details] [associations]
symbol:GMDS "GDP-mannose 4,6 dehydratase" species:9606
"Homo sapiens" [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IC]
[GO:0070401 "NADP+ binding" evidence=IDA] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=IGI;IDA] [GO:0019673
"GDP-mannose metabolic process" evidence=IGI;IDA] [GO:0007219
"Notch signaling pathway" evidence=ISS] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 GO:GO:0005737 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 EMBL:AL034344
eggNOG:COG1089 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
HOGENOM:HOG000168003 OMA:IAYNLTD HOVERGEN:HBG000727 EMBL:AF042377
EMBL:CR541929 EMBL:CR541947 EMBL:AL033517 EMBL:AL035693
EMBL:AL137179 EMBL:AL158139 EMBL:BC000117 EMBL:AF040260
IPI:IPI00030207 RefSeq:NP_001240775.1 RefSeq:NP_001491.1
UniGene:Hs.144496 UniGene:Hs.660919 PDB:1T2A PDBsum:1T2A
ProteinModelPortal:O60547 SMR:O60547 IntAct:O60547 STRING:O60547
PhosphoSite:O60547 PaxDb:O60547 PeptideAtlas:O60547 PRIDE:O60547
DNASU:2762 Ensembl:ENST00000380815 GeneID:2762 KEGG:hsa:2762
UCSC:uc003mtq.3 CTD:2762 GeneCards:GC06M001624 HGNC:HGNC:4369
HPA:HPA031528 MIM:602884 neXtProt:NX_O60547 PharmGKB:PA28754
InParanoid:O60547 OrthoDB:EOG4FXR7M PhylomeDB:O60547 ChiTaRS:GMDS
EvolutionaryTrace:O60547 GenomeRNAi:2762 NextBio:10866
ArrayExpress:O60547 Bgee:O60547 CleanEx:HS_GMDS
Genevestigator:O60547 GermOnline:ENSG00000112699 Uniprot:O60547
Length = 372
Score = 159 (61.0 bits), Expect = 8.6e-09, P = 8.6e-09
Identities = 85/327 (25%), Positives = 146/327 (44%)
Query: 74 LVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNIGAVKVLQELFPEP---GRLQFIYA 129
L+TG G GS+ A LL+ Y V IV S N G ++ L + P+ G ++ Y
Sbjct: 27 LITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKN-PQAHIEGNMKLHYG 85
Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITS-NTLVVLESMARHGV 188
DL D+ + K +E + + A ++V + + D +Y ++ TL +L+++ G+
Sbjct: 86 DLTDSTCLVKIINEVKPTEIYNLGAQSHV-KISFDLAEYTADVDGVGTLRLLDAVKTCGL 144
Query: 189 DTLI--Y-SSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMIL 245
+ Y +ST YG+ +++P E TP P +PYG AK A I+++F + ++ +
Sbjct: 145 INSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNG 204
Query: 246 RYFNVIGSDPEGRLGEAPRPELREHGRIS-GA--CFDAARGIIAGLKVKG--TDYSTADG 300
FN P R R +I G CF G + + G DY A
Sbjct: 205 ILFN--HESPRRGANFVTRKISRSVAKIYLGQLECFSL--GNLDAKRDWGHAKDYVEAMW 260
Query: 301 TCVRDYIDVNDLVDA--HVKALERAQPKK-VGIYNVGTGKGRSVKEFVEACKKATSANIK 357
+++ + D V A V ++ K + I +G++ E V CK+ ++
Sbjct: 261 LMLQND-EPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENE-VGRCKETGKVHVT 318
Query: 358 VIYEPRRPGDYAEVYSDPTKIRLELNW 384
V + RP + + D TK + +LNW
Sbjct: 319 VDLKYYRPTEVDFLQGDCTKAKQKLNW 345
>UNIPROTKB|F6W0W9 [details] [associations]
symbol:GMDS "GDP-mannose 4,6 dehydratase isoform 1"
species:9544 "Macaca mulatta" [GO:0005575 "cellular_component"
evidence=ND] [GO:0007219 "Notch signaling pathway" evidence=ISS]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=ISS]
[GO:0019673 "GDP-mannose metabolic process" evidence=ISS]
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISS] [GO:0070401 "NADP+ binding" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640 OMA:IAYNLTD
CTD:2762 EMBL:JU322217 EMBL:JV046790 RefSeq:NP_001253718.1
UniGene:Mmu.34300 Ensembl:ENSMMUT00000008111 GeneID:707051
KEGG:mcc:707051 NextBio:19971634 Uniprot:F6W0W9
Length = 372
Score = 159 (61.0 bits), Expect = 8.6e-09, P = 8.6e-09
Identities = 85/327 (25%), Positives = 146/327 (44%)
Query: 74 LVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNIGAVKVLQELFPEP---GRLQFIYA 129
L+TG G GS+ A LL+ Y V IV S N G ++ L + P+ G ++ Y
Sbjct: 27 LITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKN-PQAHIEGNMKLHYG 85
Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITS-NTLVVLESMARHGV 188
DL D+ + K +E + + A ++V + + D +Y ++ TL +L+++ G+
Sbjct: 86 DLTDSTCLVKIINEVKPTEIYNLGAQSHV-KISFDLAEYTADVDGVGTLRLLDAVKTCGL 144
Query: 189 DTLI--Y-SSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMIL 245
+ Y +ST YG+ +++P E TP P +PYG AK A I+++F + ++ +
Sbjct: 145 INSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNG 204
Query: 246 RYFNVIGSDPEGRLGEAPRPELREHGRIS-GA--CFDAARGIIAGLKVKG--TDYSTADG 300
FN P R R +I G CF G + + G DY A
Sbjct: 205 ILFN--HESPRRGANFVTRKISRSVAKIYLGQLECFSL--GNLDAKRDWGHAKDYVEAMW 260
Query: 301 TCVRDYIDVNDLVDA--HVKALERAQPKK-VGIYNVGTGKGRSVKEFVEACKKATSANIK 357
+++ + D V A V ++ K + I +G++ E V CK+ ++
Sbjct: 261 LMLQND-EPEDFVIATGEVHSVREFVEKSFMHIGKTIVWEGKNENE-VGRCKETGKVHVT 318
Query: 358 VIYEPRRPGDYAEVYSDPTKIRLELNW 384
V + RP + + D TK + +LNW
Sbjct: 319 VDLKYYRPTEVDFLQGDCTKAKQKLNW 345
>UNIPROTKB|F7EWI9 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:9483
"Callithrix jacchus" [GO:0005575 "cellular_component" evidence=ND]
[GO:0007219 "Notch signaling pathway" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS] [GO:0019673
"GDP-mannose metabolic process" evidence=ISS] [GO:0042351 "'de
novo' GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0070401
"NADP+ binding" evidence=ISS] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0005622 GO:GO:0070401 GO:GO:0019673 GO:GO:0042351
GO:GO:0008446 TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640
OMA:IAYNLTD CTD:2762 EMBL:ACFV01112271 EMBL:ACFV01112272
EMBL:ACFV01112273 EMBL:ACFV01112274 EMBL:ACFV01112275
EMBL:ACFV01112276 EMBL:ACFV01112277 EMBL:ACFV01112278
EMBL:ACFV01112279 EMBL:ACFV01112280 EMBL:ACFV01112281
EMBL:ACFV01112282 EMBL:ACFV01112283 EMBL:ACFV01112284
EMBL:ACFV01112285 EMBL:ACFV01112286 EMBL:ACFV01112287
EMBL:ACFV01112288 EMBL:ACFV01112289 EMBL:ACFV01112290
EMBL:ACFV01112291 EMBL:ACFV01112292 EMBL:ACFV01112293
EMBL:ACFV01112294 EMBL:ACFV01112295 EMBL:ACFV01112296
EMBL:ACFV01112297 EMBL:ACFV01112298 EMBL:ACFV01112299
EMBL:ACFV01112300 EMBL:ACFV01112301 RefSeq:XP_002746325.1
ProteinModelPortal:F7EWI9 Ensembl:ENSCJAT00000038466
GeneID:100390839 Uniprot:F7EWI9
Length = 372
Score = 159 (61.0 bits), Expect = 8.6e-09, P = 8.6e-09
Identities = 85/327 (25%), Positives = 146/327 (44%)
Query: 74 LVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNIGAVKVLQELFPEP---GRLQFIYA 129
L+TG G GS+ A LL+ Y V IV S N G ++ L + P+ G ++ Y
Sbjct: 27 LITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKN-PQAHIEGNMKLHYG 85
Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITS-NTLVVLESMARHGV 188
DL D+ + K +E + + A ++V + + D +Y ++ TL +L+++ G+
Sbjct: 86 DLTDSTCLVKIINEVKPTEIYNLGAQSHV-KISFDLAEYTADVDGVGTLRLLDAVKTCGL 144
Query: 189 DTLI--Y-SSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMIL 245
+ Y +ST YG+ +++P E TP P +PYG AK A I+++F + ++ +
Sbjct: 145 INSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNG 204
Query: 246 RYFNVIGSDPEGRLGEAPRPELREHGRIS-GA--CFDAARGIIAGLKVKG--TDYSTADG 300
FN P R R +I G CF G + + G DY A
Sbjct: 205 ILFN--HESPRRGANFVTRKISRSVAKIYLGQLECFSL--GNLDAKRDWGHAKDYVEAMW 260
Query: 301 TCVRDYIDVNDLVDA--HVKALERAQPKK-VGIYNVGTGKGRSVKEFVEACKKATSANIK 357
+++ + D V A V ++ K + I +G++ E V CK+ ++
Sbjct: 261 LMLQND-EPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENE-VGRCKETGKVHVT 318
Query: 358 VIYEPRRPGDYAEVYSDPTKIRLELNW 384
V + RP + + D TK + +LNW
Sbjct: 319 VDLKYYRPTEVDFLQGDCTKAKQKLNW 345
>UNIPROTKB|Q6T1X6 [details] [associations]
symbol:rmd "GDP-6-deoxy-D-mannose reductase" species:143495
"Aneurinibacillus thermoaerophilus" [GO:0033705
"GDP-4-dehydro-6-deoxy-D-mannose reductase activity" evidence=IDA]
[GO:0055114 "oxidation-reduction process" evidence=IDA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 EMBL:AY442352
PDB:2PK3 PDBsum:2PK3 ProteinModelPortal:Q6T1X6 SMR:Q6T1X6
BRENDA:1.1.1.281 EvolutionaryTrace:Q6T1X6 GO:GO:0033705
Uniprot:Q6T1X6
Length = 309
Score = 157 (60.3 bits), Expect = 8.8e-09, P = 8.8e-09
Identities = 67/246 (27%), Positives = 109/246 (44%)
Query: 74 LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD 133
L+TG AG++G + A L + + V SR N + P ++ I D+ D
Sbjct: 4 LITGVAGFVGKYLANHLTEQNVEVF---GTSRNN-------EAKLPN---VEMISLDIMD 50
Query: 134 AKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIY 193
++ V K S+ D + H AA + V +S L+ + TL VL+++ +D I
Sbjct: 51 SQRVKKVISDIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRIL 110
Query: 194 S-STCATYGE--PEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNV 250
+ + YG PE+ P++EE P++PYG +K + + K M ++ R FN
Sbjct: 111 TIGSSEEYGMILPEESPVSEENQLRPMSPYGVSKASVGMLARQYVKAYGMDIIHTRTFNH 170
Query: 251 IGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRDYIDVN 310
IG P LG + ++ I + II KV + VRD+ DV
Sbjct: 171 IG--PGQSLGFVTQDFAKQIVDIE---MEKQEPII---KVGNLE-------AVRDFTDVR 215
Query: 311 DLVDAH 316
D+V A+
Sbjct: 216 DIVQAY 221
>TIGR_CMR|CPS_4199 [details] [associations]
symbol:CPS_4199 "GDP-mannose 4,6-dehydratase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005622 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0019673
eggNOG:COG1089 KO:K01711 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 RefSeq:YP_270850.1
ProteinModelPortal:Q47WH2 SMR:Q47WH2 STRING:Q47WH2 GeneID:3519434
KEGG:cps:CPS_4199 PATRIC:21471261 ProtClustDB:CLSK589180
BioCyc:CPSY167879:GI48-4209-MONOMER Uniprot:Q47WH2
Length = 374
Score = 158 (60.7 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 88/345 (25%), Positives = 150/345 (43%)
Query: 74 LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG-NIGAVKVLQELFPEPGRLQFI-YADL 131
L+TG G GS+ A LL+ Y V + S N + + + E + F+ Y DL
Sbjct: 8 LITGITGQDGSYLAELLLEKGYEVHGIKRRSSSLNTERIDHIYQDNHEKNQKFFLHYGDL 67
Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITS-NTLVVLESMARHGVD- 189
D+ + + + D V + A ++V S P +Y ++ + TL +LE++ G++
Sbjct: 68 TDSSNLTRILKDVQPDEVYNLGAQSHVAVSFECP-EYTADVDAIGTLRLLEAIRFLGLEK 126
Query: 190 -TLIY-SSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRY 247
T Y +ST YGE +++P +E TP P +PY AK A I++++ ++ M
Sbjct: 127 KTKFYQASTSELYGEVQEIPQSETTPFHPRSPYAVAKMYAYWIVVNYRESYGMYACNGIL 186
Query: 248 FNVIGSDPEGRLGEAPRP-ELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRDY 306
FN E+PR E +I+ A + A+G+ + L + D + D +DY
Sbjct: 187 FN----------HESPRRGETFVTRKITRAIANIAQGLESCLYLGNMD-ALRDWGHAKDY 235
Query: 307 IDV----------NDLVDAHVKALERAQPKKVGIYNVG---TGKGRSVKEFVEACK---- 349
+ + +D V A K + + + G T G + E K
Sbjct: 236 VRMQWMMLQQEHPDDFVIATGKQISVREFVTLSALEAGIELTFSGEGLDEVARVTKIIGD 295
Query: 350 --KATSA-NIKVIYEPR--RPGDYAEVYSDPTKIRLELNWTAKYT 389
A S +I V +PR RP + + DP+K + +L W + T
Sbjct: 296 NAPALSVGDIMVKVDPRYFRPAEVETLLGDPSKAKEKLGWVPQIT 340
>UNIPROTKB|P67910 [details] [associations]
symbol:rfaD "ADP-L-glycero-D-mannoheptose-6-epimerase"
species:83333 "Escherichia coli K-12" [GO:0097171
"ADP-L-glycero-beta-D-manno-heptose biosynthetic process"
evidence=IEA] [GO:0070401 "NADP+ binding" evidence=IDA] [GO:0016020
"membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006950 "response to stress" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0008712 "ADP-glyceromanno-heptose
6-epimerase activity" evidence=IEA;IDA] [GO:0009244
"lipopolysaccharide core region biosynthetic process"
evidence=IEA;IMP] UniPathway:UPA00356 HAMAP:MF_01601
InterPro:IPR001509 InterPro:IPR011912 Pfam:PF01370
UniPathway:UPA00958 InterPro:IPR016040 GO:GO:0005829 GO:GO:0006950
GO:GO:0016020 eggNOG:COG0451 Gene3D:3.40.50.720 EMBL:U00039
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0009244 GO:GO:0070401 GO:GO:0097171
EMBL:M33577 EMBL:X54492 PIR:JU0299 RefSeq:NP_418076.1
RefSeq:YP_491814.1 PDB:1EQ2 PDB:2X6T PDBsum:1EQ2 PDBsum:2X6T
ProteinModelPortal:P67910 SMR:P67910 DIP:DIP-35958N IntAct:P67910
SWISS-2DPAGE:P67910 PaxDb:P67910 PRIDE:P67910
EnsemblBacteria:EBESCT00000000716 EnsemblBacteria:EBESCT00000000717
EnsemblBacteria:EBESCT00000000718 EnsemblBacteria:EBESCT00000000719
EnsemblBacteria:EBESCT00000016472 GeneID:12934299 GeneID:948134
KEGG:ecj:Y75_p3555 KEGG:eco:b3619 PATRIC:32122725 EchoBASE:EB0831
EcoGene:EG10838 HOGENOM:HOG000167987 KO:K03274 OMA:AVNLWFW
ProtClustDB:PRK11150 BioCyc:EcoCyc:EG10838-MONOMER
BioCyc:ECOL316407:JW3594-MONOMER BioCyc:MetaCyc:EG10838-MONOMER
SABIO-RK:P67910 EvolutionaryTrace:P67910 Genevestigator:P67910
GO:GO:0008712 PANTHER:PTHR10366:SF29 TIGRFAMs:TIGR02197
Uniprot:P67910
Length = 310
Score = 128 (50.1 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 53/195 (27%), Positives = 88/195 (45%)
Query: 73 VLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRG----NIGAVKVLQELFPEPGRLQF 126
++VTGGAG+IGS+ ++ L D + +VDNL G N+ + + + E +Q
Sbjct: 2 IIVTGGAGFIGSNI-VKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQI 60
Query: 127 IYAD-LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMAR 185
+ + GD +A+ F E A + + G+ +D Y S L L
Sbjct: 61 MAGEEFGDVEAI---FHEGACSSTTEWD-----GKYMMDNNYQY----SKEL--LHYCLE 106
Query: 186 HGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMIL 245
+ L Y+S+ ATYG I + P+N YG +K + ++ + ++ ++
Sbjct: 107 REIPFL-YASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGF 165
Query: 246 RYFNVIGSDPEGRLG 260
RYFNV G EG G
Sbjct: 166 RYFNVYGPR-EGHKG 179
Score = 69 (29.3 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 24/79 (30%), Positives = 38/79 (48%)
Query: 304 RDYIDVNDLVDAHVKALERAQPKKVGIYNVGTGKGRSVKEFVEACKKA-TSANIKVIYEP 362
RD++ V D+ D ++ LE GI+N+GTG+ S + +A I+ I P
Sbjct: 209 RDFVYVGDVADVNLWFLENGVS---GIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFP 265
Query: 363 RR-PGDY-AEVYSDPTKIR 379
+ G Y A +D T +R
Sbjct: 266 DKLKGRYQAFTQADLTNLR 284
>UNIPROTKB|P44914 [details] [associations]
symbol:rffG "dTDP-glucose 4,6-dehydratase" species:71421
"Haemophilus influenzae Rd KW20" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:L42023
GenomeReviews:L42023_GR GO:GO:0009103 GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
KO:K01710 PANTHER:PTHR10366:SF41 PIR:C64099 RefSeq:NP_439034.2
ProteinModelPortal:P44914 SMR:P44914 GeneID:949510 KEGG:hin:HI0873
PATRIC:20190401 OMA:AKKAFRF ProtClustDB:CLSK824762 Uniprot:P44914
Length = 338
Score = 156 (60.0 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 91/355 (25%), Positives = 149/355 (41%)
Query: 72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVK-VLQELFPEPGRLQFIYAD 130
++LVTGG+G+IGS A +R + + + ++ N+ + A + L+E+ P R F D
Sbjct: 3 NILVTGGSGFIGS-ALIRYIINHTQDFVI-NIDKLTYAANQSALREVENNP-RYVFEKVD 59
Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMAR--HGV 188
+ D + F + DAVMH AA ++V S + T +LE H +
Sbjct: 60 ICDLNVIENIFEKYQPDAVMHLAAESHVDRSISGAADFVQTNIVGTYTLLEVAKNYWHTL 119
Query: 189 D----TLI---YSSTCATYGEPE--KMPITEETPQAPINPYGKAKKMAEDIILDFSKNSD 239
D T + ST YG+ + TE++P P +PY +K + ++ + +
Sbjct: 120 DEAKKTTFRFHHISTDEVYGDLSLSEPAFTEQSPYHPSSPYSASKAASNHLVQAWHRTYG 179
Query: 240 MAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTAD 299
+ V+I N G+ E P + IS A L + G D
Sbjct: 180 LPVIITNSSNNYGAYQHA---EKLIPLM-----ISNAVMGKP------LPIYG------D 219
Query: 300 GTCVRDYIDVNDLVDAHVKALERAQPKKVGI-YNVGTGKGRSVKEFVEA-CKK----ATS 353
G +RD++ V D V A L + +VG YN+G ++ E V+ C+ A S
Sbjct: 220 GQQIRDWLFVEDHVQASYLVLTKG---RVGENYNIGGNCEKTNLEVVKRICQLLEELAPS 276
Query: 354 A--NIK-----VIYEPRRPGDYAEVYSDPTKIRLELNWTAKYTNLQESLEIAWRW 401
+IK + + RPG D +KI EL W + T ++ L +W
Sbjct: 277 KPNHIKYYEDLMTFVKDRPGHDVRYSLDCSKIHAELGWQPQIT-FEQGLRQTVKW 330
>CGD|CAL0000450 [details] [associations]
symbol:GAL102 species:5476 "Candida albicans" [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IC] [GO:0009272
"fungal-type cell wall biogenesis" evidence=IMP] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 CGD:CAL0000450
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0035690 GO:GO:0009272 EMBL:AACQ01000118 EMBL:AACQ01000119
GO:GO:0008460 eggNOG:COG1088 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:XP_713734.1 RefSeq:XP_713768.1 ProteinModelPortal:Q59VY4
STRING:Q59VY4 GeneID:3644585 GeneID:3644611 KEGG:cal:CaO19.11158
KEGG:cal:CaO19.3674 Uniprot:Q59VY4
Length = 320
Score = 155 (59.6 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 49/183 (26%), Positives = 86/183 (46%)
Query: 73 VLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYAD 130
++V+GGAG+IG H ++K ++ T +D L+ + A ++ E +F++ D
Sbjct: 9 IVVSGGAGFIGIHFLCYMVKKYPNFHFTCIDKLNYAS-NATEI--ENLKSFSNFEFVHLD 65
Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH-GVD 189
L D ++N D +++FAA + V S DP+ + N T +LE + +
Sbjct: 66 LSDNLEYLLKITKNTTD-IINFAAESSVDRSFKDPVYFTKNNILATQNLLECHRLNPSIG 124
Query: 190 TLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFN 249
++ ST YG+ + E P NPY +K + II + + + + ILR N
Sbjct: 125 YFLHISTDEVYGDVYEGDNKENAVMNPTNPYSASKAAIDLIIKSYQYSYKLPITILRPNN 184
Query: 250 VIG 252
V G
Sbjct: 185 VYG 187
>UNIPROTKB|Q59VY4 [details] [associations]
symbol:TGD99 "Putative uncharacterized protein TGD99"
species:237561 "Candida albicans SC5314" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IC] [GO:0009272
"fungal-type cell wall biogenesis" evidence=IMP] [GO:0035690
"cellular response to drug" evidence=IMP] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 CGD:CAL0000450
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0035690 GO:GO:0009272 EMBL:AACQ01000118 EMBL:AACQ01000119
GO:GO:0008460 eggNOG:COG1088 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:XP_713734.1 RefSeq:XP_713768.1 ProteinModelPortal:Q59VY4
STRING:Q59VY4 GeneID:3644585 GeneID:3644611 KEGG:cal:CaO19.11158
KEGG:cal:CaO19.3674 Uniprot:Q59VY4
Length = 320
Score = 155 (59.6 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 49/183 (26%), Positives = 86/183 (46%)
Query: 73 VLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYAD 130
++V+GGAG+IG H ++K ++ T +D L+ + A ++ E +F++ D
Sbjct: 9 IVVSGGAGFIGIHFLCYMVKKYPNFHFTCIDKLNYAS-NATEI--ENLKSFSNFEFVHLD 65
Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH-GVD 189
L D ++N D +++FAA + V S DP+ + N T +LE + +
Sbjct: 66 LSDNLEYLLKITKNTTD-IINFAAESSVDRSFKDPVYFTKNNILATQNLLECHRLNPSIG 124
Query: 190 TLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFN 249
++ ST YG+ + E P NPY +K + II + + + + ILR N
Sbjct: 125 YFLHISTDEVYGDVYEGDNKENAVMNPTNPYSASKAAIDLIIKSYQYSYKLPITILRPNN 184
Query: 250 VIG 252
V G
Sbjct: 185 VYG 187
>MGI|MGI:1891112 [details] [associations]
symbol:Gmds "GDP-mannose 4, 6-dehydratase" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=ISO] [GO:0016829 "lyase activity" evidence=IEA]
[GO:0019673 "GDP-mannose metabolic process" evidence=ISO]
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISO] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0070401 "NADP+ binding" evidence=ISO] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 MGI:MGI:1891112 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0005622 GO:GO:0070401 GO:GO:0019673 GO:GO:0042351
eggNOG:COG1089 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
HOGENOM:HOG000168003 GeneTree:ENSGT00440000033640 OMA:IAYNLTD
HOVERGEN:HBG000727 CTD:2762 OrthoDB:EOG4FXR7M EMBL:AL645643
EMBL:AL645664 EMBL:AL645697 EMBL:AL645783 EMBL:AL645763
EMBL:BC031788 EMBL:BC093502 IPI:IPI00169546 RefSeq:NP_666153.1
UniGene:Mm.247143 ProteinModelPortal:Q8K0C9 SMR:Q8K0C9
STRING:Q8K0C9 PhosphoSite:Q8K0C9 PaxDb:Q8K0C9 PRIDE:Q8K0C9
Ensembl:ENSMUST00000041859 GeneID:218138 KEGG:mmu:218138
UCSC:uc007pzq.1 InParanoid:Q8K0C9 NextBio:376160 Bgee:Q8K0C9
CleanEx:MM_GMDS Genevestigator:Q8K0C9 GermOnline:ENSMUSG00000038372
Uniprot:Q8K0C9
Length = 372
Score = 154 (59.3 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 84/327 (25%), Positives = 146/327 (44%)
Query: 74 LVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNIGAVKVLQELFPEP---GRLQFIYA 129
L+TG G GS+ A LL+ Y V IV S N G ++ L + P+ G ++ Y
Sbjct: 27 LITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKN-PQAHIEGNMKLHYG 85
Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITS-NTLVVLESMARHGV 188
DL D+ + K +E + + A ++V + + D +Y ++ TL +L+++ G+
Sbjct: 86 DLTDSTCLVKIINEVKPTEIYNLGAQSHV-KISFDLAEYTADVDGVGTLRLLDAIKTCGL 144
Query: 189 DTLI--Y-SSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMIL 245
+ Y +ST YG+ +++P E TP P +PYG AK A I+++F + ++ +
Sbjct: 145 INSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNG 204
Query: 246 RYFNVIGSDPEGRLGEAPRPELREHGRIS-GA--CFDAARGIIAGLKVKG--TDYSTADG 300
FN P R R +I G CF G + + G DY A
Sbjct: 205 ILFN--HESPRRGANFVTRKISRSVAKIYLGQLECFSL--GNLDAKRDWGHAKDYVEAMW 260
Query: 301 TCVRDYIDVNDLVDA--HVKALERAQPKK-VGIYNVGTGKGRSVKEFVEACKKATSANIK 357
+++ + D V A V ++ K + I +G++ E V CK+ ++
Sbjct: 261 LMLQND-EPEDFVIATGEVHSVREFVEKSFMHIGKTIVWEGKNENE-VGRCKETGKVHVT 318
Query: 358 VIYEPRRPGDYAEVYSDPTKIRLELNW 384
V + RP + + D +K + +LNW
Sbjct: 319 VDLKYYRPTEVDFLQGDCSKAQQKLNW 345
>POMBASE|SPBPB2B2.11 [details] [associations]
symbol:SPBPB2B2.11 "nucleotide-sugar 4,6-dehydratase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006012 "galactose metabolic process" evidence=IEP] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0031506 "cell wall
glycoprotein biosynthetic process" evidence=NAS] [GO:0033554
"cellular response to stress" evidence=IEP] [GO:0042125 "protein
galactosylation" evidence=NAS] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005888
InterPro:IPR020904 Pfam:PF01370 InterPro:IPR016040
PomBase:SPBPB2B2.11 GO:GO:0005829 GO:GO:0005634 GO:GO:0033554
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
EMBL:CU329671 GO:GO:0016491 GO:GO:0055114 GO:GO:0006012
GO:GO:0042125 GO:GO:0031506 GO:GO:0008460 eggNOG:COG1088
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:NP_596857.1 HSSP:P26391 ProteinModelPortal:Q9HDU4
STRING:Q9HDU4 EnsemblFungi:SPBPB2B2.11.1 GeneID:2541398
KEGG:spo:SPBPB2B2.11 OMA:IQYVKDR OrthoDB:EOG4VX5DN NextBio:20802505
Uniprot:Q9HDU4
Length = 365
Score = 153 (58.9 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 59/205 (28%), Positives = 102/205 (49%)
Query: 66 HEEGVTHVLVTGGAGYIGSHAALRLLKDSY---RVTIVDNLSRGNIGAVKVLQELFPEPG 122
++E + L+TGGAG+IGS+ L D Y T +D LS + L ++ +P
Sbjct: 5 YKEYKGYALITGGAGFIGSNF-LDYAVDKYPDFHFTCIDKLSYVSNYTTVFLSKVLNQPN 63
Query: 123 RLQFIYADLG-DAKAVNKFFSE----NAFDAVMHFAAVAYVGESTLDPLKYY-HNI--TS 174
+F+ DL + K + +F E N +++FAA + V S +DPL + +NI T
Sbjct: 64 -FRFLEMDLATNYKFLYQFMVEDSEINKITHIINFAAESSVDRSFIDPLYFTKNNILSTQ 122
Query: 175 NTL----VVL--ESMARHGVDTLIYSSTCATYGEP-EKMPITEETPQAPINPYGKAKKMA 227
N L ++L + R+ ++ ++ ST YGE E + E++ P +PY +K
Sbjct: 123 NLLECVRILLGKKEELRNRLN-FVHVSTDEVYGEQDENASVDEKSKLNPTSPYAASKAAV 181
Query: 228 EDIILDFSKNSDMAVMILRYFNVIG 252
+ II + + ++V ++R NV G
Sbjct: 182 DLIIQSYRYSYKISVTVIRANNVYG 206
>UNIPROTKB|Q8K3X3 [details] [associations]
symbol:GMDS "GDP-mannose 4,6 dehydratase" species:10029
"Cricetulus griseus" [GO:0005575 "cellular_component" evidence=ND]
[GO:0007219 "Notch signaling pathway" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS] [GO:0019673
"GDP-mannose metabolic process" evidence=ISS] [GO:0042351 "'de
novo' GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0070401
"NADP+ binding" evidence=ISS] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040
Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622 GO:GO:0070401
GO:GO:0019673 GO:GO:0042351 GO:GO:0008446 TIGRFAMs:TIGR01472
EMBL:AF525364 RefSeq:NP_001233625.1 ProteinModelPortal:Q8K3X3
SMR:Q8K3X3 GeneID:100689436 CTD:33716 HOVERGEN:HBG000727
Uniprot:Q8K3X3
Length = 372
Score = 153 (58.9 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 84/327 (25%), Positives = 146/327 (44%)
Query: 74 LVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNIGAVKVLQELFPEP---GRLQFIYA 129
L+TG G GS+ A LL+ Y V IV S N G ++ L + P+ G ++ Y
Sbjct: 27 LITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKN-PQAHIEGNMKLHYG 85
Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITS-NTLVVLESMARHGV 188
DL D+ + K +E + + A ++V + + D +Y ++ TL +L+++ G+
Sbjct: 86 DLTDSTCLVKIINEVKPTEIYNLGAQSHV-KISFDLAEYTADVDGVGTLRLLDAIKTCGL 144
Query: 189 DTLI--Y-SSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMIL 245
+ Y +ST YG+ +++P E TP P +PYG AK A I+++F + ++ +
Sbjct: 145 INSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNG 204
Query: 246 RYFNVIGSDPEGRLGEAPRPELREHGRIS-GA--CFDAARGIIAGLKVKG--TDYSTADG 300
FN P R R +I G CF G + + G DY A
Sbjct: 205 ILFN--HESPRRGANFVTRKISRSVAKIYLGQLECFSL--GNLDAKRDWGHAKDYVEAMW 260
Query: 301 TCVRDYIDVNDLVDA--HVKALERAQPKK-VGIYNVGTGKGRSVKEFVEACKKATSANIK 357
+++ + D V A V ++ K + I +G++ E V CK+ ++
Sbjct: 261 LMLQND-EPEDFVIATGEVHSVREFVEKSFMHIGKTIVWEGKNENE-VGRCKETGKIHVT 318
Query: 358 VIYEPRRPGDYAEVYSDPTKIRLELNW 384
V + RP + + D +K + +LNW
Sbjct: 319 VDLKYYRPTEVDFLQGDCSKAQQKLNW 345
>RGD|1311008 [details] [associations]
symbol:Gmds "GDP-mannose 4, 6-dehydratase" species:10116 "Rattus
norvegicus" [GO:0005575 "cellular_component" evidence=ND]
[GO:0005622 "intracellular" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=ISS] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISO;ISS] [GO:0019673
"GDP-mannose metabolic process" evidence=ISO;ISS] [GO:0042351 "'de
novo' GDP-L-fucose biosynthetic process" evidence=ISO;ISS]
[GO:0070401 "NADP+ binding" evidence=ISO;ISS] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 InterPro:IPR016040 RGD:1311008
Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622 GO:GO:0070401
EMBL:CH473977 GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711
GO:GO:0008446 TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
GeneTree:ENSGT00440000033640 OMA:IAYNLTD HOVERGEN:HBG000727
CTD:2762 OrthoDB:EOG4FXR7M EMBL:BC104708 IPI:IPI00362967
RefSeq:NP_001034695.1 UniGene:Rn.212995 SMR:Q3MHS7 STRING:Q3MHS7
Ensembl:ENSRNOT00000023691 GeneID:291095 KEGG:rno:291095
UCSC:RGD:1311008 InParanoid:Q3MHS7 NextBio:632111
Genevestigator:Q3MHS7 Uniprot:Q3MHS7
Length = 372
Score = 153 (58.9 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 84/327 (25%), Positives = 146/327 (44%)
Query: 74 LVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNIGAVKVLQELFPEP---GRLQFIYA 129
L+TG G GS+ A LL+ Y V IV S N G ++ L + P+ G ++ Y
Sbjct: 27 LITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKN-PQAHIEGNMKLHYG 85
Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITS-NTLVVLESMARHGV 188
DL D+ + K +E + + A ++V + + D +Y ++ TL +L+++ G+
Sbjct: 86 DLTDSTCLVKIINEVKPTEIYNLGAQSHV-KISFDLAEYTADVDGVGTLRLLDAIKTCGL 144
Query: 189 DTLI--Y-SSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMIL 245
+ Y +ST YG+ +++P E TP P +PYG AK A I+++F + ++ +
Sbjct: 145 INSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNG 204
Query: 246 RYFNVIGSDPEGRLGEAPRPELREHGRIS-GA--CFDAARGIIAGLKVKG--TDYSTADG 300
FN P R R +I G CF G + + G DY A
Sbjct: 205 ILFN--HESPRRGANFVTRKISRSVAKIYLGQLECFSL--GNLDAKRDWGHAKDYVEAMW 260
Query: 301 TCVRDYIDVNDLVDA--HVKALERAQPKK-VGIYNVGTGKGRSVKEFVEACKKATSANIK 357
+++ + D V A V ++ K + I +G++ E V CK+ ++
Sbjct: 261 LMLQND-EPEDFVIATGEVHSVREFVEKSFMHIGKTIVWEGKNENE-VGRCKETGKIHVT 318
Query: 358 VIYEPRRPGDYAEVYSDPTKIRLELNW 384
V + RP + + D +K + +LNW
Sbjct: 319 VDLKYYRPTEVDFLQGDCSKAQQKLNW 345
>TAIR|locus:2053275 [details] [associations]
symbol:UXS6 "UDP-XYL synthase 6" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM;IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0042732 "D-xylose metabolic process"
evidence=RCA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005886 GO:GO:0003824 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
EMBL:AC005727 HSSP:P27830 HOGENOM:HOG000168004 OMA:LGHENFE
ProtClustDB:CLSN2683686 EMBL:AY099703 EMBL:AY128899 IPI:IPI00536112
PIR:F84688 RefSeq:NP_001077972.1 RefSeq:NP_180443.1
RefSeq:NP_973555.1 UniGene:At.38572 ProteinModelPortal:Q9ZV36
SMR:Q9ZV36 STRING:Q9ZV36 PRIDE:Q9ZV36 EnsemblPlants:AT2G28760.1
EnsemblPlants:AT2G28760.2 EnsemblPlants:AT2G28760.3 GeneID:817426
KEGG:ath:AT2G28760 TAIR:At2g28760 InParanoid:Q9ZV36
PhylomeDB:Q9ZV36 ArrayExpress:Q9ZV36 Genevestigator:Q9ZV36
Uniprot:Q9ZV36
Length = 343
Score = 151 (58.2 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 55/187 (29%), Positives = 85/187 (45%)
Query: 73 VLVTGGAGYIGSHAALRLLK-DSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
+LVTGGAG+IGSH +L++ + V + DN G+ +K + P R + I D+
Sbjct: 33 ILVTGGAGFIGSHLVDKLMQNEKNEVIVADNYFTGSKDNLK---KWIGHP-RFELIRHDV 88
Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
+ F E D + H A A +P+K TL +L R G L
Sbjct: 89 TEP-----LFVE--VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARIL 141
Query: 192 IYSSTCATYGEPEKMPITEETPQAPINP------YGKAKKMAEDIILDFSKNSDMAVMIL 245
+ +ST YG+P P TE +NP Y + K++AE ++ D+ + + + I
Sbjct: 142 L-TSTSEVYGDPLVHPQTESY-WGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIA 199
Query: 246 RYFNVIG 252
R FN G
Sbjct: 200 RIFNTYG 206
>UNIPROTKB|Q6P621 [details] [associations]
symbol:gmds "GDP-mannose 4,6-dehydratase" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005575 "cellular_component"
evidence=ND] [GO:0007219 "Notch signaling pathway" evidence=ISS]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=ISS]
[GO:0019673 "GDP-mannose metabolic process" evidence=ISS]
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISS] [GO:0070401 "NADP+ binding" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
GeneTree:ENSGT00440000033640 OMA:IAYNLTD HOVERGEN:HBG000727
OrthoDB:EOG4FXR7M EMBL:AAMC01033108 EMBL:AAMC01033109
EMBL:AAMC01033110 EMBL:AAMC01033111 EMBL:AAMC01033112
EMBL:AAMC01033113 EMBL:AAMC01033114 EMBL:AAMC01033115
EMBL:AAMC01033116 EMBL:AAMC01033117 EMBL:AAMC01033118
EMBL:AAMC01033119 EMBL:AAMC01033120 EMBL:AAMC01033121
EMBL:AAMC01033122 EMBL:AAMC01033123 EMBL:AAMC01033124
EMBL:AAMC01033125 EMBL:AAMC01033126 EMBL:AAMC01033127
EMBL:AAMC01033128 EMBL:AAMC01033129 EMBL:AAMC01033130
EMBL:AAMC01033131 EMBL:AAMC01033132 EMBL:BC062513 UniGene:Str.7169
ProteinModelPortal:Q6P621 STRING:Q6P621 Ensembl:ENSXETT00000001321
Xenbase:XB-GENE-943015 InParanoid:Q6P621 Bgee:Q6P621 Uniprot:Q6P621
Length = 383
Score = 151 (58.2 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 82/332 (24%), Positives = 144/332 (43%)
Query: 74 LVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNIGAVKVLQELFPEP-----GRLQFI 127
L+TG G GS+ A LL+ Y V IV S N G + + L+ P G ++
Sbjct: 38 LITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRI---EHLYKNPHAHIEGNMKLH 94
Query: 128 YADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITS-NTLVVLESMARH 186
Y DL D+ + K +E + + A ++V + + D +Y ++ TL +L++
Sbjct: 95 YGDLTDSTCLVKIINEVKPTEIYNLGAQSHV-KISFDLAEYTADVDGLGTLRLLDATKTC 153
Query: 187 GVDTLI--Y-SSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVM 243
G+ + Y +ST YG+ +++P E TP P +PYG AK A I+++F + ++ +
Sbjct: 154 GLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAV 213
Query: 244 ILRYFNVIGSDPEGRLGEAPRPELREHGRIS-GACFDAARGIIAGLKVKG--TDYSTADG 300
FN P R R +I G + G + + G DY A
Sbjct: 214 NGILFN--HESPRRGANFVTRKISRSVAKIHLGQMEFVSLGNLDAKRDWGHAKDYVEAMW 271
Query: 301 TCVR-----DYIDVNDLVDAHVKALERAQPKKVGIYNVGTGKGRSVKEFVEACKKATSAN 355
++ D++ V + + +E+A +G V GK + V C + +
Sbjct: 272 LMLQTDEPEDFVISTGEVHSVREFVEKAF-MHIGKTIVWEGKNENE---VGRCSETGKIH 327
Query: 356 IKVIYEPRRPGDYAEVYSDPTKIRLELNWTAK 387
+KV ++ RP + + D +K + +L W K
Sbjct: 328 VKVDHKYYRPTEVEFLQGDCSKAKNKLGWIPK 359
>UNIPROTKB|P0AC88 [details] [associations]
symbol:gmd "GDP-mannose 4,6-dehydratase" species:83333
"Escherichia coli K-12" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0019673 "GDP-mannose metabolic process"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA] [GO:0016829 "lyase activity" evidence=IEA]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=IEA]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=IEA]
[GO:0009242 "colanic acid biosynthetic process" evidence=IEA]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 UniPathway:UPA00980 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0005622 GO:GO:0009103 GO:GO:0019673 GO:GO:0042351 EMBL:U38473
GO:GO:0009242 eggNOG:COG1089 KO:K01711 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 PIR:D64971 RefSeq:NP_416557.1 RefSeq:YP_490295.1
PDB:1DB3 PDBsum:1DB3 ProteinModelPortal:P0AC88 SMR:P0AC88
DIP:DIP-48216N IntAct:P0AC88 EnsemblBacteria:EBESCT00000004343
EnsemblBacteria:EBESCT00000015616 GeneID:12930696 GeneID:946562
KEGG:ecj:Y75_p2016 KEGG:eco:b2053 PATRIC:32119439 EchoBASE:EB1735
EcoGene:EG11787 HOGENOM:HOG000168003 ProtClustDB:CLSK880276
BioCyc:EcoCyc:GDPMANDEHYDRA-MONOMER
BioCyc:ECOL316407:JW2038-MONOMER
BioCyc:MetaCyc:GDPMANDEHYDRA-MONOMER EvolutionaryTrace:P0AC88
Genevestigator:P0AC88 Uniprot:P0AC88
Length = 373
Score = 150 (57.9 bits), Expect = 8.9e-08, P = 8.9e-08
Identities = 91/349 (26%), Positives = 146/349 (41%)
Query: 74 LVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNIGAVK-VLQELFPEPGRLQFIYADL 131
L+TG G GS+ A LL+ Y V I S N V + Q+ + Y DL
Sbjct: 6 LITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDL 65
Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITS-NTLVVLESMARHGVD- 189
D + + E D V + A+++V S P +Y ++ + TL +LE++ G++
Sbjct: 66 SDTSNLTRILREVQPDEVYNLGAMSHVAVSFESP-EYTADVDAMGTLRLLEAIRFLGLEK 124
Query: 190 -TLIY-SSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRY 247
T Y +ST YG +++P E TP P +PY AK A I +++ ++ M
Sbjct: 125 KTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMYACNGIL 184
Query: 248 FNVIGSDPEGRLGEAPRP-ELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRDY 306
FN E+PR E +I+ A + A+G+ + L + D S D +DY
Sbjct: 185 FN----------HESPRRGETFVTRKITRAIANIAQGLESCLYLGNMD-SLRDWGHAKDY 233
Query: 307 IDVN----------DLVDA-----HVKALERAQPKKVGIYNVGTGKGRSVKEFVEACKKA 351
+ + D V A V+ ++GI G G K V +
Sbjct: 234 VKMQWMMLQQEQPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGH 293
Query: 352 TSANIK-----VIYEPR--RPGDYAEVYSDPTKIRLELNWTAKYTNLQE 393
+ +K + +PR RP + + DPTK +L W + T L+E
Sbjct: 294 DAPGVKPGDVIIAVDPRYFRPAEVETLLGDPTKAHEKLGWKPEIT-LRE 341
>FB|FBgn0031661 [details] [associations]
symbol:Gmd "GDP-mannose 4,6-dehydratase" species:7227
"Drosophila melanogaster" [GO:0008446 "GDP-mannose 4,6-dehydratase
activity" evidence=ISS;IDA] [GO:0042351 "'de novo' GDP-L-fucose
biosynthetic process" evidence=ISS] [GO:0005622 "intracellular"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0019673 "GDP-mannose metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0042350
"GDP-L-fucose biosynthetic process" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=IMP] [GO:2000035 "regulation of
stem cell division" evidence=IMP] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 EMBL:AE014134 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0007219 GO:GO:0005622 GO:GO:2000035
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 OMA:INPKYFR
GO:GO:0008446 TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640
GO:GO:0042350 CTD:33716 EMBL:AM231687 EMBL:AY089519
RefSeq:NP_608888.2 UniGene:Dm.4967 ProteinModelPortal:Q9VMW9
SMR:Q9VMW9 STRING:Q9VMW9 PaxDb:Q9VMW9 EnsemblMetazoa:FBtr0079049
GeneID:33716 KEGG:dme:Dmel_CG8890 FlyBase:FBgn0031661
InParanoid:Q9VMW9 OrthoDB:EOG40K6FB PhylomeDB:Q9VMW9
GenomeRNAi:33716 NextBio:784930 Bgee:Q9VMW9 GermOnline:CG8890
Uniprot:Q9VMW9
Length = 395
Score = 149 (57.5 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 86/338 (25%), Positives = 146/338 (43%)
Query: 74 LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEP-----GRLQFIY 128
L+TG G GS+ A LLK Y V + + R + ++ L+ +P GR++ Y
Sbjct: 50 LITGITGQDGSYLAEFLLKKDYEVHGI--IRRASTFNTTRIEHLYADPKAHKGGRMKLHY 107
Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITS-NTLVVLESMARHG 187
D+ D+ ++ K + + + AA ++V S D +Y + + TL +L+++ G
Sbjct: 108 GDMTDSSSLVKIINMVKPTEIYNLAAQSHVKVS-FDLSEYTAEVDAVGTLRILDAIRTCG 166
Query: 188 VDTLI--Y-SSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMI 244
++ + Y +ST YG+ + P E+TP P +PY AK I++++ + +M
Sbjct: 167 MEKNVRFYQASTSELYGKVVETPQNEQTPFYPRSPYACAKMYGFWIVINYREAYNMYACN 226
Query: 245 LRYFNVIGSDPEGRLGE--APRPELREHGRISGACFDAAR-GIIAGLKVKG--TDYSTAD 299
FN P R GE R R +I + G + + G +DY A
Sbjct: 227 GILFN--HESP--RRGENFVTRKITRSVAKIYHKQMEYFELGNLDSKRDWGHASDYVEAM 282
Query: 300 GTCVR-----DYIDVNDLVDAH-VKALERAQPKKVGIYNVGTGKGRSVKEFVEACKKATS 353
++ DY+ + H V+ A K + T KG+ V E + T
Sbjct: 283 WMMLQRESPSDYVIATG--ETHSVREFVEAAFKHID--REITWKGKGVDEV--GVENGTG 336
Query: 354 ANIKVIYEPR--RPGDYAEVYSDPTKIRLELNWTAKYT 389
++V P+ RP + + D +K ELNWT K T
Sbjct: 337 I-VRVRINPKYFRPTEVDLLQGDASKANRELNWTPKVT 373
>UNIPROTKB|Q06952 [details] [associations]
symbol:rfbD "Probable GDP-mannose 4,6-dehydratase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=ISS]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005622 GO:GO:0009103 GO:GO:0019673
GO:GO:0042351 EMBL:X59554 PIR:S28470 RefSeq:NP_229900.1
ProteinModelPortal:Q06952 SMR:Q06952 DNASU:2614706 GeneID:2614706
KEGG:vch:VC0243 PATRIC:20079530 eggNOG:COG1089 KO:K01711
OMA:INPKYFR ProtClustDB:CLSK793536 BioCyc:MetaCyc:MONOMER-13574
GO:GO:0008446 TIGRFAMs:TIGR01472 Uniprot:Q06952
Length = 373
Score = 148 (57.2 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 88/345 (25%), Positives = 146/345 (42%)
Query: 74 LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGR----LQFIYA 129
L+TG G GS+ A LL+ Y V + R ++ + + L+ +P + Y
Sbjct: 7 LITGITGQDGSYLAEFLLEKGYEVHGIKR--RSSLFNTQRVDHLYKDPHEEDVNFKLHYG 64
Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITS-NTLVVLESMARHGV 188
DL D+ + + +E D V + A ++V S P +Y ++ + TL +LE++ G+
Sbjct: 65 DLTDSSNLTRILAEVQPDEVYNLGAQSHVAVSFQSP-EYTADVDAIGTLRLLEAIRFLGL 123
Query: 189 D--TLIY-SSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMIL 245
T Y +ST YG +++P E TP P +PY AK A I +++ ++ +
Sbjct: 124 TKKTKFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKMYAYWITINYRESYGIYACNG 183
Query: 246 RYFNVIGSDPEGRLGEA--PRPELREHGRISGACFDAA-RGIIAGLKVKG--TDYSTADG 300
FN P R GE R R I+ G + L+ G DY
Sbjct: 184 ILFN--HESP--RRGETFVTRKITRGMANIAQGLEKCLFMGNLDALRDWGHAKDYVKMQW 239
Query: 301 TCV-----RDYIDVNDLVDAHVKALERAQPKKVGIYNVGTGKGRSVKEFVEAC--KKATS 353
+ RD++ V V+ +++GI GKG K V++ KA +
Sbjct: 240 MMLQQDEPRDFVIATG-VQYSVREFIDMSARELGIELEFVGKGVDEKAVVKSVIGTKAPA 298
Query: 354 ---ANIKVIYEPR--RPGDYAEVYSDPTKIRLELNWTAKYTNLQE 393
+I V +P RP + + DP+ + EL W + T LQ+
Sbjct: 299 IKVGDIIVAVDPAYFRPAEVETLLGDPSLAKKELGWVPEIT-LQQ 342
>TIGR_CMR|VC_0243 [details] [associations]
symbol:VC_0243 "GDP-mannose 4,6-dehydratase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005622 GO:GO:0009103 GO:GO:0019673
GO:GO:0042351 EMBL:X59554 PIR:S28470 RefSeq:NP_229900.1
ProteinModelPortal:Q06952 SMR:Q06952 DNASU:2614706 GeneID:2614706
KEGG:vch:VC0243 PATRIC:20079530 eggNOG:COG1089 KO:K01711
OMA:INPKYFR ProtClustDB:CLSK793536 BioCyc:MetaCyc:MONOMER-13574
GO:GO:0008446 TIGRFAMs:TIGR01472 Uniprot:Q06952
Length = 373
Score = 148 (57.2 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 88/345 (25%), Positives = 146/345 (42%)
Query: 74 LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGR----LQFIYA 129
L+TG G GS+ A LL+ Y V + R ++ + + L+ +P + Y
Sbjct: 7 LITGITGQDGSYLAEFLLEKGYEVHGIKR--RSSLFNTQRVDHLYKDPHEEDVNFKLHYG 64
Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITS-NTLVVLESMARHGV 188
DL D+ + + +E D V + A ++V S P +Y ++ + TL +LE++ G+
Sbjct: 65 DLTDSSNLTRILAEVQPDEVYNLGAQSHVAVSFQSP-EYTADVDAIGTLRLLEAIRFLGL 123
Query: 189 D--TLIY-SSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMIL 245
T Y +ST YG +++P E TP P +PY AK A I +++ ++ +
Sbjct: 124 TKKTKFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKMYAYWITINYRESYGIYACNG 183
Query: 246 RYFNVIGSDPEGRLGEA--PRPELREHGRISGACFDAA-RGIIAGLKVKG--TDYSTADG 300
FN P R GE R R I+ G + L+ G DY
Sbjct: 184 ILFN--HESP--RRGETFVTRKITRGMANIAQGLEKCLFMGNLDALRDWGHAKDYVKMQW 239
Query: 301 TCV-----RDYIDVNDLVDAHVKALERAQPKKVGIYNVGTGKGRSVKEFVEAC--KKATS 353
+ RD++ V V+ +++GI GKG K V++ KA +
Sbjct: 240 MMLQQDEPRDFVIATG-VQYSVREFIDMSARELGIELEFVGKGVDEKAVVKSVIGTKAPA 298
Query: 354 ---ANIKVIYEPR--RPGDYAEVYSDPTKIRLELNWTAKYTNLQE 393
+I V +P RP + + DP+ + EL W + T LQ+
Sbjct: 299 IKVGDIIVAVDPAYFRPAEVETLLGDPSLAKKELGWVPEIT-LQQ 342
>TIGR_CMR|CBU_0689 [details] [associations]
symbol:CBU_0689 "GDP-mannose 4,6-dehydratase"
species:227377 "Coxiella burnetii RSA 493" [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005622 GenomeReviews:AE016828_GR GO:GO:0019673 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 HSSP:P93031 EMBL:AF387640
ProteinModelPortal:Q93N54 SMR:Q93N54 PRIDE:Q93N54 PATRIC:17930061
ProtClustDB:CLSK914242 BioCyc:CBUR227377:GJ7S-687-MONOMER
Uniprot:Q93N54
Length = 348
Score = 147 (56.8 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 80/329 (24%), Positives = 134/329 (40%)
Query: 75 VTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNIGAVK-VLQELFPEPGRLQFIYADLG 132
+TG G GS+ A LL+ Y V ++ S N + + +E E RL Y D+
Sbjct: 7 ITGITGQDGSYLAELLLRKDYEVHGMIRRSSSFNTERLSDIYEEKHKENARLFLHYGDIT 66
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESM--ARHGVDT 190
D +NK E V + AA ++V S P+ I TL +LE++ A + +
Sbjct: 67 DGLVLNKLIHEIKPHEVYNLAAQSHVRVSFDIPVYTMETIGLGTLNILEAIKNADNAKEI 126
Query: 191 LIY-SSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFN 249
Y +S+ YG+ + +P TE TP P +PY AK A +++ ++ + FN
Sbjct: 127 RFYQASSSEMYGDVKSVPQTESTPFNPRSPYACAKVFAHYQTINYRESYGLHASTGILFN 186
Query: 250 VIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRDYIDV 309
E+PR R ++ I+AGL+ K + RD+
Sbjct: 187 ----------HESPR---RGETFVTRKITSGIAKILAGLEKK---IYLGNLEAKRDWGYA 230
Query: 310 NDLVDAHVKALERAQPKKVGIYNVGTGKGRSVKEFVEACKKATSANIKVIYEPR-RPGDY 368
D V+A L++ P I T + + E+ + VI RP +
Sbjct: 231 KDYVEAMWLMLQQDTPDDYVIATGETWSVKELLEYSFNLVNLNWRDFVVIDPKYYRPAEV 290
Query: 369 AEVYSDPTKIRLELNWTAKYTNLQESLEI 397
+ +P K + +L W T+ + ++I
Sbjct: 291 DLLLGEPKKAKEKLGWQPN-TSFHKLIKI 318
>UNIPROTKB|F6Z8R0 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:13616
"Monodelphis domestica" [GO:0005575 "cellular_component"
evidence=ND] [GO:0007219 "Notch signaling pathway" evidence=ISS]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=ISS]
[GO:0019673 "GDP-mannose metabolic process" evidence=ISS]
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISS] [GO:0070401 "NADP+ binding" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 GO:GO:0008446
TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640 OMA:IAYNLTD
Ensembl:ENSMODT00000010461 Uniprot:F6Z8R0
Length = 347
Score = 146 (56.5 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 51/169 (30%), Positives = 87/169 (51%)
Query: 74 LVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNIGAVKVLQELFPEP---GRLQFIYA 129
L+TG G GS+ A LL+ Y V IV S N G ++ L + P+ G ++ Y
Sbjct: 27 LITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKN-PQAHIEGNMKLHYG 85
Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITS-NTLVVLESMARHGV 188
DL D+ + K +E + + A ++V + + D +Y ++ TL +L+++ G+
Sbjct: 86 DLTDSTCLVKIINEVKPTEIYNLGAQSHV-KISFDLAEYTADVDGVGTLRLLDAIKTCGL 144
Query: 189 DTLI--Y-SSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDF 234
+ Y +ST YG+ +++P E TP P +PYG AK A I+++F
Sbjct: 145 INSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNF 193
>ASPGD|ASPL0000035041 [details] [associations]
symbol:AN3119 species:162425 "Emericella nidulans"
[GO:0005575 "cellular_component" evidence=ND] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:BN001306 EMBL:AACD01000051 GO:GO:0044237 RefSeq:XP_660723.1
ProteinModelPortal:Q5B8L1 EnsemblFungi:CADANIAT00009957
GeneID:2873998 KEGG:ani:AN3119.2 HOGENOM:HOG000218208 OMA:WFASPRS
OrthoDB:EOG41NXW0 Uniprot:Q5B8L1
Length = 316
Score = 144 (55.7 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 60/192 (31%), Positives = 94/192 (48%)
Query: 72 HVLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLSRGNIGA-VKVLQELFPEPGRLQFIYA 129
H+L+TG AG+IG A LL D SY + + D ++ I A VK +P+ R + A
Sbjct: 2 HILITGAAGFIGQLLARELLNDPSYTLVLTD-INEPPIPAGVK-----YPQNART--VTA 53
Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVG-ESTLDPLKYYHNITSNTLVVLESMARH-- 186
DL KA + + + DAV F + G E+ D L N+ + T +LE++
Sbjct: 54 DL--VKAADTVV-DKSLDAVYAFHGIMSSGSEANFD-LGMTVNVDA-TRKLLEALRATCP 108
Query: 187 GVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILR 246
GV +IYSS+ A YG+P + + P + YG K + E ++ ++++ + LR
Sbjct: 109 GV-RVIYSSSQAVYGQPLPEVVDDTVIPTPQSSYGAEKLICETLVNEYTRRGFITGFTLR 167
Query: 247 YFNVIGSDPEGR 258
F I P GR
Sbjct: 168 -FPTISVRP-GR 177
>UNIPROTKB|E9PI88 [details] [associations]
symbol:GMDS "GDP-mannose 4,6 dehydratase" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=IEA] [GO:0019673 "GDP-mannose
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005622 GO:GO:0019673 EMBL:AL034344 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 EMBL:AL033517 EMBL:AL035693 EMBL:AL137179
EMBL:AL158139 RefSeq:NP_001240775.1 UniGene:Hs.144496
UniGene:Hs.660919 GeneID:2762 KEGG:hsa:2762 CTD:2762 HGNC:HGNC:4369
ChiTaRS:GMDS GenomeRNAi:2762 EMBL:AL354670 EMBL:AL451141
EMBL:AL591048 IPI:IPI00642048 ProteinModelPortal:E9PI88 SMR:E9PI88
Ensembl:ENST00000530927 UCSC:uc021ykn.1 ArrayExpress:E9PI88
Bgee:E9PI88 Uniprot:E9PI88
Length = 342
Score = 143 (55.4 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 81/318 (25%), Positives = 141/318 (44%)
Query: 83 GSHAALRLLKDSYRVT-IVDNLSRGNIGAVKVLQELFPEP---GRLQFIYADLGDAKAVN 138
GS+ A LL+ Y V IV S N G ++ L + P+ G ++ Y DL D+ +
Sbjct: 6 GSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKN-PQAHIEGNMKLHYGDLTDSTCLV 64
Query: 139 KFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITS-NTLVVLESMARHGVDTLI--Y-S 194
K +E + + A ++V + + D +Y ++ TL +L+++ G+ + Y +
Sbjct: 65 KIINEVKPTEIYNLGAQSHV-KISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQA 123
Query: 195 STCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSD 254
ST YG+ +++P E TP P +PYG AK A I+++F + ++ + FN
Sbjct: 124 STSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFN--HES 181
Query: 255 PEGRLGEAPRPELREHGRIS-GA--CFDAARGIIAGLKVKG--TDYSTADGTCVRDYIDV 309
P R R +I G CF G + + G DY A +++ +
Sbjct: 182 PRRGANFVTRKISRSVAKIYLGQLECFSL--GNLDAKRDWGHAKDYVEAMWLMLQND-EP 238
Query: 310 NDLVDA--HVKALERAQPKK-VGIYNVGTGKGRSVKEFVEACKKATSANIKVIYEPRRPG 366
D V A V ++ K + I +G++ E V CK+ ++ V + RP
Sbjct: 239 EDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENE-VGRCKETGKVHVTVDLKYYRPT 297
Query: 367 DYAEVYSDPTKIRLELNW 384
+ + D TK + +LNW
Sbjct: 298 EVDFLQGDCTKAKQKLNW 315
>FB|FBgn0036997 [details] [associations]
symbol:CG5955 species:7227 "Drosophila melanogaster"
[GO:0003978 "UDP-glucose 4-epimerase activity" evidence=ISS]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
EMBL:AE014296 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 GO:GO:0003978
GeneTree:ENSGT00390000014037 KO:K15789 OMA:DYAVEIF EMBL:AY058410
RefSeq:NP_649230.1 UniGene:Dm.4281 SMR:Q9VPE8 STRING:Q9VPE8
EnsemblMetazoa:FBtr0078197 GeneID:40268 KEGG:dme:Dmel_CG5955
UCSC:CG5955-RA FlyBase:FBgn0036997 InParanoid:Q9VPE8
OrthoDB:EOG4VT4CZ GenomeRNAi:40268 NextBio:817884 Uniprot:Q9VPE8
Length = 367
Score = 143 (55.4 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 56/187 (29%), Positives = 88/187 (47%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
+L+TGG G +G A +LL+ Y N+ +I +K Q + E G +I+AD+
Sbjct: 48 ILITGGLGQLGIECA-KLLRTQYGS---QNVILSDI--IKPSQSVL-ENG--PYIFADIL 98
Query: 133 DAKAVNKFFSENAFDAVMHFAAV-AYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
D K + K ++ D ++HF+A+ + VGE + PL NI V+ +A+ +
Sbjct: 99 DFKGLQKIVVDHRIDWLIHFSALLSAVGEQNV-PLAVRVNIEGVHNVI--ELAKQYKLRI 155
Query: 192 IYSSTCATYG-EPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNV 250
ST +G + + P T Q P YG +K AE I + + LR+ V
Sbjct: 156 FVPSTIGAFGPDSPRNPTPNVTIQRPRTIYGVSKVHAELIGEYYYHKFGLDFRCLRFPGV 215
Query: 251 IGSDPEG 257
I SDP G
Sbjct: 216 ISSDPPG 222
>WB|WBGene00015298 [details] [associations]
symbol:C01F1.3 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0018991 "oviposition"
evidence=IMP] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0040007 GO:GO:0018991 GO:GO:0002119
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0040011 GeneTree:ENSGT00530000063128 KO:K12450 GO:GO:0008460
eggNOG:COG1088 OMA:TARMNNI PANTHER:PTHR10366:SF41 HSSP:P26391
EMBL:FO080258 PIR:T15370 RefSeq:NP_001040727.1
ProteinModelPortal:Q17556 SMR:Q17556 STRING:Q17556
World-2DPAGE:0020:Q17556 PaxDb:Q17556 EnsemblMetazoa:C01F1.3a
GeneID:173762 KEGG:cel:CELE_C01F1.3 UCSC:C01F1.3a CTD:173762
WormBase:C01F1.3a HOGENOM:HOG000017218 InParanoid:Q17556
NextBio:880983 ArrayExpress:Q17556 Uniprot:Q17556
Length = 631
Score = 133 (51.9 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 42/188 (22%), Positives = 83/188 (44%)
Query: 72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG--NIGAVKVLQELFPEPGRLQFIYA 129
+V++TGG G+IGS+ + + D++ N+ + N V + + P R + +
Sbjct: 7 NVVITGGCGFIGSNF-VNYIHDAWPTCNFVNIDKLILNSDTQNVAESVRNSP-RYKLVLT 64
Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-V 188
D+ + A+ F +N D V+HFAA + + N + + LE++ +G +
Sbjct: 65 DIKNEAAILNVFEQNEIDTVIHFAADCTSTRCYNETAEAVQNNVLSFIQFLETVRTYGKI 124
Query: 189 DTLIYSSTCATYGEPE----KMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMI 244
++ ST YG+ + + E + P NPY K E + + ++ ++
Sbjct: 125 KRFVHISTDEVYGDSDLSENEQGKVEFSRLVPGNPYAATKIAGEAYVRAYQTQYNLPIVT 184
Query: 245 LRYFNVIG 252
R N+ G
Sbjct: 185 ARMNNIYG 192
Score = 58 (25.5 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 19/75 (25%), Positives = 38/75 (50%)
Query: 289 KVKGTDYSTADGTCVRDYIDVNDLVDAHVKAL-ERAQPKKVGIYNVGTGKGRSVKEFVEA 347
KV+G G +R ++ V+D A +KA+ E+ + + IYN+GT ++V + +
Sbjct: 209 KVRGEYTIQGSGKQLRSWLFVDD-ASAGLKAVCEKGELHE--IYNLGTYYEKNVADLAKT 265
Query: 348 CKKATSANIKVIYEP 362
++ + +EP
Sbjct: 266 IQEEVDLQLGRAHEP 280
>WB|WBGene00022498 [details] [associations]
symbol:hsd-2 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006694 GeneTree:ENSGT00550000074557
HOGENOM:HOG000266975 EMBL:FO081655 PIR:T30003 RefSeq:NP_508851.1
ProteinModelPortal:Q23086 SMR:Q23086 EnsemblMetazoa:ZC8.1
GeneID:191049 KEGG:cel:CELE_ZC8.1 CTD:191049 WormBase:ZC8.1
InParanoid:Q23086 OMA:FERANIT NextBio:947784 Uniprot:Q23086
Length = 374
Score = 143 (55.4 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 63/230 (27%), Positives = 102/230 (44%)
Query: 72 HVLVTGGAGYIGSH--AALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYA 129
H ++ GG G++G+H +AL+ + R+ +VD + +K+ + + +I A
Sbjct: 3 HYVIVGGGGFLGAHVISALQKIGCKERIIVVDPCPQ-EFKTIKI------DKSNISYIKA 55
Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSN-TLVVLESMARHGV 188
D K + N AV+H AAV + G D K HN N T +++ GV
Sbjct: 56 SFLDDKVLENIL--NGASAVVHLAAVGHTGLIAGDR-KSVHNFNVNGTKQLIKQCKALGV 112
Query: 189 DTLIYSSTCAT--YGEPEKMPITEETPQA-P---INPYGKAKKMAEDIILDFSKNSDMAV 242
+Y+S+ A GEP +TE+ P P ++ Y +K AE +L S D
Sbjct: 113 KRFLYASSVAVSFIGEPLDN-VTEDDPLPDPKKYLDFYSASKAEAETYVLSQS-TPDFKT 170
Query: 243 MILRYFNVIG-SDPEGRLGEAPRPE-------LREHGRISGACFDAARGI 284
+ LR+ + G DP L A + + HGR S +C A+ G+
Sbjct: 171 VCLRFRGIYGPEDPNVTLKVANLIKNGLFIGMVSAHGRESVSC--ASSGV 218
>UNIPROTKB|F6W683 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:9796 "Equus
caballus" [GO:0005575 "cellular_component" evidence=ND] [GO:0007219
"Notch signaling pathway" evidence=ISS] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0019673 "GDP-mannose
metabolic process" evidence=ISS] [GO:0042351 "'de novo'
GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0070401 "NADP+
binding" evidence=ISS] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0005622 GO:GO:0070401 GO:GO:0019673 GO:GO:0042351
GO:GO:0008446 TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640
OMA:IAYNLTD Ensembl:ENSECAT00000001963 Uniprot:F6W683
Length = 343
Score = 142 (55.0 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 81/318 (25%), Positives = 140/318 (44%)
Query: 83 GSHAALRLLKDSYRVT-IVDNLSRGNIGAVKVLQELFPEP---GRLQFIYADLGDAKAVN 138
GS+ A LL+ Y V IV S N G ++ L + P+ G ++ Y DL D+ +
Sbjct: 7 GSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKN-PQAHIEGNMKLHYGDLTDSTCLV 65
Query: 139 KFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITS-NTLVVLESMARHGVDTLI--Y-S 194
K +E + + A ++V + + D +Y ++ TL +L+++ G+ + Y +
Sbjct: 66 KIINEVKPTEIYNLGAQSHV-KISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQA 124
Query: 195 STCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSD 254
ST YG+ +++P E TP P +PYG AK A I+++F + ++ + FN
Sbjct: 125 STSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFN--HES 182
Query: 255 PEGRLGEAPRPELREHGRIS-GA--CFDAARGIIAGLKVKG--TDYSTADGTCVRDYIDV 309
P R R +I G CF G + + G DY A +++ +
Sbjct: 183 PRRGANFVTRKISRSVAKIYLGQLECFSL--GNLDAKRDWGHAKDYVEAMWLMLQND-EP 239
Query: 310 NDLVDA--HVKALERAQPKK-VGIYNVGTGKGRSVKEFVEACKKATSANIKVIYEPRRPG 366
D V A V ++ K + I +G++ E V CK+ ++ V RP
Sbjct: 240 EDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENE-VGRCKETGKVHVTVDLRYYRPT 298
Query: 367 DYAEVYSDPTKIRLELNW 384
+ + D TK + +LNW
Sbjct: 299 EVDFLQGDCTKAKQKLNW 316
>CGD|CAL0005951 [details] [associations]
symbol:ERG26 species:5476 "Candida albicans" [GO:0000252 "C-3
sterol dehydrogenase (C-4 sterol decarboxylase) activity"
evidence=IGI;ISS] [GO:0006696 "ergosterol biosynthetic process"
evidence=IGI;ISS] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 CGD:CAL0005951
eggNOG:COG0451 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006696 KO:K07748 GO:GO:0000252 EMBL:AACQ01000084
EMBL:AACQ01000083 RefSeq:XP_715564.1 RefSeq:XP_715620.1
ProteinModelPortal:Q5A1B0 STRING:Q5A1B0 GeneID:3642731
GeneID:3642803 KEGG:cal:CaO19.10427 KEGG:cal:CaO19.2909
Uniprot:Q5A1B0
Length = 350
Score = 128 (50.1 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 46/194 (23%), Positives = 92/194 (47%)
Query: 68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAV-KVLQELFP-EPGRLQ 125
E + VL+ GG+G++G H L++ YR ++ ++ + + L + F +P ++Q
Sbjct: 3 ESLQSVLIIGGSGFLGLH----LIEQFYRHCPNVAITVFDVRPLPEKLSKYFTFDPSKIQ 58
Query: 126 FIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNI----TSNTLVVLE 181
F DL K V+ +++ D ++H A+ + G P + Y + T N L V +
Sbjct: 59 FFKGDLTSDKDVSDAINQSKCDVIVHSASPMH-GL----PQEIYEKVNVQGTKNLLSVAQ 113
Query: 182 SMARHGVDTLIYSSTCATYGEPEKMPITEET---PQAPINPYGKAKKMAEDIILDFSKNS 238
+ H V L+Y+S+ + + +ET P+ ++ Y + K AE+ ++ + N
Sbjct: 114 KL--H-VKALVYTSSAGVIFNGQDVINADETWPYPEVHMDGYNETKAAAEEAVMKANDND 170
Query: 239 DMAVMILRYFNVIG 252
+ + LR + G
Sbjct: 171 QLRTVCLRPAGIFG 184
Score = 55 (24.4 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 13/44 (29%), Positives = 22/44 (50%)
Query: 283 GIIAGLKVKGTDYSTADGTCVRDYIDVNDLVDAHVKALERAQPK 326
G+ A K+ + Y D + D+ V ++ DAHV A ++ K
Sbjct: 193 GLRASAKLGQSKYQLGDNNNLFDWTYVGNVADAHVLAAQKILDK 236
>UNIPROTKB|Q5A1B0 [details] [associations]
symbol:ERG26 "Putative uncharacterized protein ERG26"
species:237561 "Candida albicans SC5314" [GO:0000252 "C-3 sterol
dehydrogenase (C-4 sterol decarboxylase) activity" evidence=IGI]
[GO:0006696 "ergosterol biosynthetic process" evidence=IGI]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 CGD:CAL0005951
eggNOG:COG0451 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006696 KO:K07748 GO:GO:0000252 EMBL:AACQ01000084
EMBL:AACQ01000083 RefSeq:XP_715564.1 RefSeq:XP_715620.1
ProteinModelPortal:Q5A1B0 STRING:Q5A1B0 GeneID:3642731
GeneID:3642803 KEGG:cal:CaO19.10427 KEGG:cal:CaO19.2909
Uniprot:Q5A1B0
Length = 350
Score = 128 (50.1 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 46/194 (23%), Positives = 92/194 (47%)
Query: 68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAV-KVLQELFP-EPGRLQ 125
E + VL+ GG+G++G H L++ YR ++ ++ + + L + F +P ++Q
Sbjct: 3 ESLQSVLIIGGSGFLGLH----LIEQFYRHCPNVAITVFDVRPLPEKLSKYFTFDPSKIQ 58
Query: 126 FIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNI----TSNTLVVLE 181
F DL K V+ +++ D ++H A+ + G P + Y + T N L V +
Sbjct: 59 FFKGDLTSDKDVSDAINQSKCDVIVHSASPMH-GL----PQEIYEKVNVQGTKNLLSVAQ 113
Query: 182 SMARHGVDTLIYSSTCATYGEPEKMPITEET---PQAPINPYGKAKKMAEDIILDFSKNS 238
+ H V L+Y+S+ + + +ET P+ ++ Y + K AE+ ++ + N
Sbjct: 114 KL--H-VKALVYTSSAGVIFNGQDVINADETWPYPEVHMDGYNETKAAAEEAVMKANDND 170
Query: 239 DMAVMILRYFNVIG 252
+ + LR + G
Sbjct: 171 QLRTVCLRPAGIFG 184
Score = 55 (24.4 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 13/44 (29%), Positives = 22/44 (50%)
Query: 283 GIIAGLKVKGTDYSTADGTCVRDYIDVNDLVDAHVKALERAQPK 326
G+ A K+ + Y D + D+ V ++ DAHV A ++ K
Sbjct: 193 GLRASAKLGQSKYQLGDNNNLFDWTYVGNVADAHVLAAQKILDK 236
>UNIPROTKB|F1RX12 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=ISS]
[GO:0019673 "GDP-mannose metabolic process" evidence=ISS]
[GO:0070401 "NADP+ binding" evidence=ISS] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0042351 "'de novo'
GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0005575
"cellular_component" evidence=ND] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640 OMA:IAYNLTD
CTD:2762 EMBL:CT961043 EMBL:CU302446 EMBL:CU682457
RefSeq:XP_003128195.3 Ensembl:ENSSSCT00000001084 GeneID:100520846
KEGG:ssc:100520846 Uniprot:F1RX12
Length = 350
Score = 141 (54.7 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 81/318 (25%), Positives = 139/318 (43%)
Query: 83 GSHAALRLLKDSYRVT-IVDNLSRGNIGAVKVLQELFPEP---GRLQFIYADLGDAKAVN 138
GS+ A LL+ Y V IV S N G ++ L + P+ G ++ Y DL D+ +
Sbjct: 14 GSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKN-PQAHIEGNMKLHYGDLTDSTCLV 72
Query: 139 KFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITS-NTLVVLESMARHGV--DTLIY-S 194
K +E + + A ++V + + D +Y ++ TL +L+++ G+ Y +
Sbjct: 73 KIINEVKPTEIYNLGAQSHV-KISFDLAEYTADVDGVGTLRLLDAVKTCGLIGSVRFYQA 131
Query: 195 STCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSD 254
ST YG+ ++ P E TP P +PYG AK A I+++F + ++ + FN
Sbjct: 132 STSELYGKVQETPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFN--HES 189
Query: 255 PEGRLGEAPRPELREHGRIS-GA--CFDAARGIIAGLKVKG--TDYSTADGTCVRDYIDV 309
P R R +I G CF G + + G DY A ++ +
Sbjct: 190 PRRGANFVTRKISRSVAKIYLGQLECFSL--GNLDAKRDWGHAKDYVEAMWLMLQSD-EP 246
Query: 310 NDLVDA--HVKALERAQPKK-VGIYNVGTGKGRSVKEFVEACKKATSANIKVIYEPRRPG 366
D V A V ++ K + I +G+ E V CK++ +++V + RP
Sbjct: 247 EDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKDEHE-VGRCKESGRVHVRVDLKYYRPT 305
Query: 367 DYAEVYSDPTKIRLELNW 384
+ + D TK + +LNW
Sbjct: 306 EVDFLQGDCTKAKQKLNW 323
>TAIR|locus:2168539 [details] [associations]
symbol:UXS3 "UDP-glucuronic acid decarboxylase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IDA;TAS] [GO:0042732 "D-xylose metabolic process"
evidence=RCA;IDA] [GO:0048040 "UDP-glucuronate decarboxylase
activity" evidence=IDA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0005829 EMBL:CP002688 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0042732
GO:GO:0048040 IPI:IPI00846930 RefSeq:NP_001078768.1
UniGene:At.24136 ProteinModelPortal:F4KHU8 SMR:F4KHU8 PRIDE:F4KHU8
EnsemblPlants:AT5G59290.2 GeneID:836047 KEGG:ath:AT5G59290
OMA:EINMVEN ArrayExpress:F4KHU8 Uniprot:F4KHU8
Length = 357
Score = 141 (54.7 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 50/187 (26%), Positives = 85/187 (45%)
Query: 73 VLVTGGAGYIGSHAALRLLK-DSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
+L++GGAG+IGSH +L++ + V + DN G+ + L++ P R + I D+
Sbjct: 47 ILISGGAGFIGSHLVDKLMENEKNEVVVADNYFTGS---KENLKKWIGHP-RFELIRHDV 102
Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
+ + D + H A A +P+K TL +L R G L
Sbjct: 103 TEPLLIE-------VDRIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARIL 155
Query: 192 IYSSTCATYGEPEKMPITEETPQAPINP------YGKAKKMAEDIILDFSKNSDMAVMIL 245
+ +ST YG+P P E+ +NP Y + K++AE ++ D+ + + + I
Sbjct: 156 L-TSTSEVYGDPLIHP-QPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIA 213
Query: 246 RYFNVIG 252
R FN G
Sbjct: 214 RIFNTYG 220
>ASPGD|ASPL0000052066 [details] [associations]
symbol:AN0746 species:162425 "Emericella nidulans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 EMBL:BN001308
GO:GO:0050662 GO:GO:0044237 EMBL:AACD01000012 HOGENOM:HOG000218208
OrthoDB:EOG41NXW0 RefSeq:XP_658350.1 ProteinModelPortal:Q5BFD4
EnsemblFungi:CADANIAT00001918 GeneID:2876520 KEGG:ani:AN0746.2
OMA:INEYTRR Uniprot:Q5BFD4
Length = 321
Score = 139 (54.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 47/169 (27%), Positives = 82/169 (48%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
VL+TG GY+G A LL S +T+ + ++ A + R + I ADL
Sbjct: 3 VLITGAGGYVGQELASALLASSPDLTV----TLADVVAPVIPASAAQHASRTKCIQADLT 58
Query: 133 DAKAVNKFF-SENAFDAVMHFAAVAYVG-ESTLD-PLKYYHNITSNTLVVLESMARHGVD 189
K V++ F S N +D + + G E+ + ++ + T + L L ++ + GV
Sbjct: 59 SPKVVDELFTSSNRYDTIYLLHGIMSSGAEANFELGMRVNFDATRDILDRLRAV-QPGVK 117
Query: 190 TLIYSSTCATYGEPEKMPITEET--PQAPINPYGKAKKMAEDIILDFSK 236
++++S+ A YG K + +ET P P + YG K M E ++ D+S+
Sbjct: 118 -VVFTSSLAVYGLAPKGFVIDETNFPPVPSSSYGTQKLMIELLLNDYSR 165
>TIGR_CMR|CJE_1611 [details] [associations]
symbol:CJE_1611 "GDP-mannose 4,6-dehydratase"
species:195099 "Campylobacter jejuni RM1221" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0044237 KO:K01711 GO:GO:0008446
HOGENOM:HOG000167992 RefSeq:YP_179592.1 ProteinModelPortal:Q5HSZ3
STRING:Q5HSZ3 GeneID:3232239 KEGG:cjr:CJE1611 PATRIC:20045019
OMA:RISIFYA ProtClustDB:CLSK931088
BioCyc:CJEJ195099:GJC0-1641-MONOMER Uniprot:Q5HSZ3
Length = 343
Score = 118 (46.6 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 41/158 (25%), Positives = 71/158 (44%)
Query: 74 LVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
L+TG G +GS A LL ++ Y V + + + L + + R+ YADL
Sbjct: 6 LITGFTGQVGSQMADFLLANTDYEVIGMMRWQEP-MDNIYHLSDRINKKDRISIFYADLN 64
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESM----ARHGV 188
D ++ K F D + H AA +Y S P++ T +LE++ A+ G
Sbjct: 65 DYSSLQKLFESQRPDVIFHLAAQSYPKTSFDIPIETLQTNIIGTANILENIRILKAKDGY 124
Query: 189 DTLIY-SSTCATYGEPEK-MPITEETPQAPINPYGKAK 224
D +++ S+ YG + + + E+T +PY +K
Sbjct: 125 DPVVHVCSSSEVYGRAKVGIKLNEDTTFHGASPYSISK 162
Score = 63 (27.2 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 30/106 (28%), Positives = 46/106 (43%)
Query: 303 VRDYIDVNDLVDAHVKALERAQPKKV--G-IYNVGTGKGRSVKEFVEACKK-ATSANIKV 358
VR + D D + A+ +Q KV G +N+ + + E +E +T +IK+
Sbjct: 226 VRTFQDARDAIRAYYLLSLESQKGKVPCGEAFNIAGEEAFKLPEVIEILLSFSTRKDIKI 285
Query: 359 IY-EPR-RPGDYAEVYSDPTKIRLELNWTAKYT--NLQESLEIAWR 400
E R RP D D TKI+ +NW + + E L WR
Sbjct: 286 EQDEERLRPIDADYQMFDNTKIKSFINWKPEIAARKMFEDLLNHWR 331
>ZFIN|ZDB-GENE-050419-45 [details] [associations]
symbol:gmds "GDP-mannose 4,6-dehydratase"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0019673 "GDP-mannose metabolic
process" evidence=IEA;ISS] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IEA;ISS] [GO:0008417 "fucosyltransferase activity"
evidence=IMP] [GO:0007219 "Notch signaling pathway" evidence=IMP]
[GO:0010842 "retina layer formation" evidence=IMP] [GO:0036065
"fucosylation" evidence=IMP] [GO:0021744 "dorsal motor nucleus of
vagus nerve development" evidence=IMP] [GO:0021564 "vagus nerve
development" evidence=IMP] [GO:0042351 "'de novo' GDP-L-fucose
biosynthetic process" evidence=ISS] [GO:0070401 "NADP+ binding"
evidence=ISS] InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 ZFIN:ZDB-GENE-050419-45 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0007219 GO:GO:0005622
GO:GO:0010842 GO:GO:0019673 GO:GO:0008417 EMBL:BX510653 KO:K01711
OMA:INPKYFR GO:GO:0008446 TIGRFAMs:TIGR01472
GeneTree:ENSGT00440000033640 CTD:2762 GO:GO:0021744 GO:GO:0021564
EMBL:BX678772 IPI:IPI00650926 RefSeq:NP_956783.3 UniGene:Dr.26662
Ensembl:ENSDART00000103234 GeneID:393461 KEGG:dre:393461
ArrayExpress:F1QPT3 Bgee:F1QPT3 Uniprot:F1QPT3
Length = 377
Score = 140 (54.3 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 85/340 (25%), Positives = 147/340 (43%)
Query: 74 LVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNIGAVKVLQE---------LFPEPGR 123
++TG G GS+ A LL Y V I+ S N G ++ L +
Sbjct: 25 IITGITGQDGSYLAELLLAKGYEVHGILRRSSSFNTGRIEHLYHNPQTHTEGSIGATKDH 84
Query: 124 LQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITS-NTLVVLES 182
++ Y DL D+ + K +E + + A ++V + + D +Y ++ TL +L++
Sbjct: 85 MKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHV-KISFDLAEYTADVDGVGTLRLLDA 143
Query: 183 MARHGV-DTLIY--SSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSD 239
+ G+ DT+ + +ST YG+ +++P E TP P +PYG AK A I+++F + +
Sbjct: 144 VKTCGLTDTVRFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVINFREAYN 203
Query: 240 MAVMILRYFNVIGSDPEGRLGEAPRPELREHGRIS-GA--CFDAARGIIAGLKVKG--TD 294
+ + FN P R R +I G CF G + ++ G D
Sbjct: 204 LFAVNGILFN--HESPRRGSNFVTRKISRSVAKIHLGQLECFSL--GNLDSMRDWGHAKD 259
Query: 295 YSTADGTCVR-----DYIDVNDLVDAHVKALERAQPKKVGIYNVGTGKGRSVKEFVEACK 349
Y A ++ D++ V + + +ERA K VG V GK KE V C+
Sbjct: 260 YVEAMWLMLQQEEPVDFVIATGEVHSVREFVERAF-KHVGKTIVWEGKDE--KE-VGRCQ 315
Query: 350 KATSANIKVIYEPRRPGDYAEVYSDPTKIRLELNWTAKYT 389
+ +++V + RP + + D +K L W + T
Sbjct: 316 ETGVIHVRVDPKYYRPTEVDYLQGDSSKAFKVLGWKPRVT 355
>TAIR|locus:2078206 [details] [associations]
symbol:UXS5 "UDP-XYL synthase 5" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0042732 "D-xylose metabolic process"
evidence=RCA;TAS] [GO:0048040 "UDP-glucuronate decarboxylase
activity" evidence=ISS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009744 "response to sucrose stimulus" evidence=RCA]
[GO:0009749 "response to glucose stimulus" evidence=RCA]
[GO:0009750 "response to fructose stimulus" evidence=RCA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0005829
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0042732
EMBL:AL133298 HSSP:P27830 HOGENOM:HOG000168004 EMBL:AY072098
EMBL:AY096586 EMBL:AY087118 EMBL:AK228600 EMBL:AK317497
IPI:IPI00534151 PIR:T45701 RefSeq:NP_001030820.1 RefSeq:NP_190228.1
UniGene:At.43598 ProteinModelPortal:Q9SN95 SMR:Q9SN95 STRING:Q9SN95
PRIDE:Q9SN95 EnsemblPlants:AT3G46440.1 EnsemblPlants:AT3G46440.2
GeneID:823794 KEGG:ath:AT3G46440 TAIR:At3g46440 InParanoid:Q9SN95
OMA:QISTQNR PhylomeDB:Q9SN95 ProtClustDB:CLSN2683686
ArrayExpress:Q9SN95 Genevestigator:Q9SN95 Uniprot:Q9SN95
Length = 341
Score = 139 (54.0 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 50/187 (26%), Positives = 84/187 (44%)
Query: 73 VLVTGGAGYIGSHAALRLLK-DSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
+L++GGAG+IGSH +L++ + V + DN G+ +K + P R + I D+
Sbjct: 31 ILISGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLK---KWIGHP-RFELIRHDV 86
Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
+ + D + H A A +P+K TL +L R G L
Sbjct: 87 TEPLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARIL 139
Query: 192 IYSSTCATYGEPEKMPITEETPQAPINP------YGKAKKMAEDIILDFSKNSDMAVMIL 245
+ +ST YG+P P E+ +NP Y + K++AE ++ D+ + + + I
Sbjct: 140 L-TSTSEVYGDPLIHP-QPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIA 197
Query: 246 RYFNVIG 252
R FN G
Sbjct: 198 RIFNTYG 204
>WB|WBGene00000266 [details] [associations]
symbol:bre-1 species:6239 "Caenorhabditis elegans"
[GO:0019673 "GDP-mannose metabolic process" evidence=IEA;IDA]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IEA;IDA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0009058 "biosynthetic process"
evidence=IEA] [GO:0008831 "dTDP-4-dehydrorhamnose reductase
activity" evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0071688 "striated muscle myosin thick filament assembly"
evidence=IMP] [GO:0042350 "GDP-L-fucose biosynthetic process"
evidence=IDA] [GO:0055120 "striated muscle dense body"
evidence=IDA] [GO:0030017 "sarcomere" evidence=IDA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 GO:GO:0005783 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0030017 GO:GO:0055120 GO:GO:0071688
GO:GO:0075015 GO:GO:0017085 GO:GO:0019673 GO:GO:0042351
eggNOG:COG1089 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
EMBL:AM231683 EMBL:AM231684 EMBL:Z68215 PIR:T20182
RefSeq:NP_001076668.1 RefSeq:NP_001076669.1 RefSeq:NP_001076670.1
RefSeq:NP_501563.1 RefSeq:NP_501564.1 UniGene:Cel.13248
ProteinModelPortal:Q18801 SMR:Q18801 STRING:Q18801 PaxDb:Q18801
PRIDE:Q18801 EnsemblMetazoa:C53B4.7b GeneID:177717
KEGG:cel:CELE_C53B4.7 UCSC:C53B4.7a.1 CTD:177717 WormBase:C53B4.7a
WormBase:C53B4.7b WormBase:C53B4.7c WormBase:C53B4.7d
WormBase:C53B4.7e GeneTree:ENSGT00440000033640 InParanoid:Q18801
OMA:IAYNLTD NextBio:898062 GO:GO:0042350 Uniprot:Q18801
Length = 399
Score = 138 (53.6 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 86/331 (25%), Positives = 138/331 (41%)
Query: 74 LVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNIGAVKVL-QELFPEPGRLQFI--YA 129
L+TG +G GS+ A LL Y+V I+ S N ++ L G F Y
Sbjct: 54 LITGISGQDGSYLAELLLSKGYKVHGIIRRSSSFNTARIEHLYSNPITHHGDSSFSLHYG 113
Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITS-NTLVVLESM--ARH 186
D+ D+ + K S V H AA ++V S D +Y + + TL +L+++ R
Sbjct: 114 DMTDSSCLIKLISTIEPTEVYHLAAQSHVKVS-FDLPEYTAEVDAVGTLRLLDAIHACRL 172
Query: 187 GVDTLIY-SSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMIL 245
Y +ST YG+ +++P +E+TP P +PY AK I++++ + +M
Sbjct: 173 TEKVRFYQASTSELYGKVQEIPQSEKTPFYPRSPYAVAKMYGYWIVVNYREAYNMFACNG 232
Query: 246 RYFNVIGSDPEGRLGEA--PRPELREHGRIS-GACFDAARGIIAGLKVKG--TDYSTADG 300
FN P R GE R R +IS G G ++ L+ G +Y A
Sbjct: 233 ILFN--HESP--RRGETFVTRKITRSVAKISLGQQESIELGNLSALRDWGHAREYVEAMW 288
Query: 301 TCVRDYIDVNDLVDAHVKALERAQPKKVGIYNVGTGKGRSVKEFVEACKKATSANIKVIY 360
++ + +D V A K + + +G + E VE K I+V
Sbjct: 289 RILQ-HDSPDDFVIATGKQFSVREFCNLAFAEIGEVL-QWEGEGVEEVGKNKDGVIRVKV 346
Query: 361 EPR--RPGDYAEVYSDPTKIRLELNWTAKYT 389
P+ RP + + + K + L W AK T
Sbjct: 347 SPKYYRPTEVETLLGNAEKAKKTLGWEAKVT 377
>UNIPROTKB|Q18801 [details] [associations]
symbol:bre-1 "GDP-mannose 4,6 dehydratase 1" species:6239
"Caenorhabditis elegans" [GO:0017085 "response to insecticide"
evidence=IMP] [GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IDA] [GO:0075015 "formation of infection structure on or
near host" evidence=IMP] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0005783
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0030017
GO:GO:0055120 GO:GO:0071688 GO:GO:0075015 GO:GO:0017085
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 EMBL:AM231683 EMBL:AM231684 EMBL:Z68215
PIR:T20182 RefSeq:NP_001076668.1 RefSeq:NP_001076669.1
RefSeq:NP_001076670.1 RefSeq:NP_501563.1 RefSeq:NP_501564.1
UniGene:Cel.13248 ProteinModelPortal:Q18801 SMR:Q18801
STRING:Q18801 PaxDb:Q18801 PRIDE:Q18801 EnsemblMetazoa:C53B4.7b
GeneID:177717 KEGG:cel:CELE_C53B4.7 UCSC:C53B4.7a.1 CTD:177717
WormBase:C53B4.7a WormBase:C53B4.7b WormBase:C53B4.7c
WormBase:C53B4.7d WormBase:C53B4.7e GeneTree:ENSGT00440000033640
InParanoid:Q18801 OMA:IAYNLTD NextBio:898062 GO:GO:0042350
Uniprot:Q18801
Length = 399
Score = 138 (53.6 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 86/331 (25%), Positives = 138/331 (41%)
Query: 74 LVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNIGAVKVL-QELFPEPGRLQFI--YA 129
L+TG +G GS+ A LL Y+V I+ S N ++ L G F Y
Sbjct: 54 LITGISGQDGSYLAELLLSKGYKVHGIIRRSSSFNTARIEHLYSNPITHHGDSSFSLHYG 113
Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITS-NTLVVLESM--ARH 186
D+ D+ + K S V H AA ++V S D +Y + + TL +L+++ R
Sbjct: 114 DMTDSSCLIKLISTIEPTEVYHLAAQSHVKVS-FDLPEYTAEVDAVGTLRLLDAIHACRL 172
Query: 187 GVDTLIY-SSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMIL 245
Y +ST YG+ +++P +E+TP P +PY AK I++++ + +M
Sbjct: 173 TEKVRFYQASTSELYGKVQEIPQSEKTPFYPRSPYAVAKMYGYWIVVNYREAYNMFACNG 232
Query: 246 RYFNVIGSDPEGRLGEA--PRPELREHGRIS-GACFDAARGIIAGLKVKG--TDYSTADG 300
FN P R GE R R +IS G G ++ L+ G +Y A
Sbjct: 233 ILFN--HESP--RRGETFVTRKITRSVAKISLGQQESIELGNLSALRDWGHAREYVEAMW 288
Query: 301 TCVRDYIDVNDLVDAHVKALERAQPKKVGIYNVGTGKGRSVKEFVEACKKATSANIKVIY 360
++ + +D V A K + + +G + E VE K I+V
Sbjct: 289 RILQ-HDSPDDFVIATGKQFSVREFCNLAFAEIGEVL-QWEGEGVEEVGKNKDGVIRVKV 346
Query: 361 EPR--RPGDYAEVYSDPTKIRLELNWTAKYT 389
P+ RP + + + K + L W AK T
Sbjct: 347 SPKYYRPTEVETLLGNAEKAKKTLGWEAKVT 377
>TIGR_CMR|GSU_0627 [details] [associations]
symbol:GSU_0627 "GDP-fucose synthetase" species:243231
"Geobacter sulfurreducens PCA" [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0016491 "oxidoreductase
activity" evidence=ISS] [GO:0016857 "racemase and epimerase
activity, acting on carbohydrates and derivatives" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0044237 HOGENOM:HOG000168011
KO:K02377 OMA:IHCAGRV RefSeq:NP_951685.1 ProteinModelPortal:Q74FI1
SMR:Q74FI1 GeneID:2685221 KEGG:gsu:GSU0627 PATRIC:22024005
ProtClustDB:CLSK827960 BioCyc:GSUL243231:GH27-626-MONOMER
Uniprot:Q74FI1
Length = 314
Score = 134 (52.2 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 76/309 (24%), Positives = 130/309 (42%)
Query: 105 RGNIGAVKVLQELFPEP-GRLQFIYA---DLGDAKAVNKFFSENAFDAVMHFAAVAYVGE 160
RG +G+ ++++L E G L + DL D AV FF+ D V F A A VG
Sbjct: 13 RGLVGSA-IVRKLTAEGYGNLLLRTSGELDLRDQAAVAAFFAAEQPDYV--FLAAAKVGG 69
Query: 161 STLD---PLKY-YHNITSNTLVVLESMARHGVDTLIY-SSTCATYGEPEKMPITEE-TPQ 214
+ P ++ Y N+ V+ S R GV L++ STC Y + PI EE
Sbjct: 70 IVANNTYPAEFIYDNLMIEANVI-HSSYRTGVSKLLFLGSTCI-YPKMASQPIREEYLLT 127
Query: 215 APINPYGKAKKMAE--DIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGR 272
P+ P +A +A+ I L S N R+ I + P G +L +
Sbjct: 128 GPLEPTNEAYAIAKIAGISLCRSYNRQYGT---RF---IAAMPTNLYGPNDNFDLEKSHV 181
Query: 273 ISGACFDAARGIIAGLKVKGTDYSTADGTCVRDYIDVNDLVDAHVKALERAQPKKVGIYN 332
+ IAG T + T G +R++I V+D+ DA + + + I N
Sbjct: 182 LPALIRKFHEAKIAGAPTV-TVWGT--GAPLREFIHVDDVADAALYLMRHHEGND--IVN 236
Query: 333 VGTGKGRSVKEFVEACKKATSANIKVIYEPRRPGDYAEVYSDPTKIRLELNWTAKYTNLQ 392
+G+G+ S+++ K +++++ +P SD +++ L W + L+
Sbjct: 237 IGSGEEISIRDLALLVKIVVGFEGELVFDASKPDGTPRKLSDVSRLH-SLGWRHRI-GLE 294
Query: 393 ESLEIAWRW 401
+ + + W
Sbjct: 295 DGVRETYEW 303
>UNIPROTKB|Q4K5C5 [details] [associations]
symbol:PFL_5490 "NAD dependent epimerase/dehydratase family
protein" species:220664 "Pseudomonas protegens Pf-5" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000076
GenomeReviews:CP000076_GR GO:GO:0044237 GO:GO:0000271
HOGENOM:HOG000167992 RefSeq:YP_262558.1 ProteinModelPortal:Q4K5C5
STRING:Q4K5C5 GeneID:3479881 KEGG:pfl:PFL_5490 PATRIC:19880467
OMA:EPNPAND ProtClustDB:CLSK881263
BioCyc:PFLU220664:GIX8-5527-MONOMER Uniprot:Q4K5C5
Length = 311
Score = 102 (41.0 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 47/181 (25%), Positives = 75/181 (41%)
Query: 74 LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD 133
L+TG G+ G + A L + Y + + GA + E G + D+ D
Sbjct: 11 LITGLEGFTGRYVADELRRSGYEI-----FGTRHSGADE------REAGCFR---VDICD 56
Query: 134 AKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNI--TSNTLVVLESMARHGVDTL 191
A+ + E + V+H AA+++V D + Y N+ T N L L ++R L
Sbjct: 57 LAALRRVVEEVEPEVVVHLAAISFVAHGEADAI-YRANVVGTRNLLEALAGLSRTPRAVL 115
Query: 192 IYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVI 251
+ SS YG I E AP N Y K+A + + + + ++I R FN
Sbjct: 116 LASSA-NVYGNAPVELIDESVSLAPANDYA-VSKLAMEYMARLWMHR-LPIVIARPFNYT 172
Query: 252 G 252
G
Sbjct: 173 G 173
Score = 74 (31.1 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 28/99 (28%), Positives = 49/99 (49%)
Query: 304 RDYIDVNDLVDAHVKALERAQPKKVGIYNVGTGKGRSVKEFVEACKKATSANIKVIYEPR 363
RD+ DV + A+V+ LE +V NVG+G+ S++E + + I+V P
Sbjct: 205 RDFSDVRVVALAYVRLLEVVPAGQV--VNVGSGQVVSLREVLAMMSGISGHEIEVRVNPE 262
Query: 364 --RPGDYAEVYSDPTKIRLELNWTAKYTNLQESLEIAWR 400
R + + D ++++ EL + T L E+LE +R
Sbjct: 263 FVRANEVKRLQGDVSRLK-ELIGGYQPTPLMETLEWMFR 300
>UNIPROTKB|F1M864 [details] [associations]
symbol:F1M864 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
IPI:IPI00392155 Ensembl:ENSRNOT00000034578 Uniprot:F1M864
Length = 350
Score = 134 (52.2 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 48/166 (28%), Positives = 73/166 (43%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
VLVTGG GY+G L K V ++D L R +P P +FI AD+
Sbjct: 13 VLVTGGGGYLGFSLGSSLAKKGASVILLD-LRRPQ----------WPLPSGTEFIQADVR 61
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
D +A+ + F D V H A+ G L + T +V+ R V L+
Sbjct: 62 DEEALYQAFQ--GVDCVFHVASYGMSGAEKLQKREIESINVGGTKLVINVCVRRRVPRLV 119
Query: 193 YSSTC-ATYG-EPEKMPITEETPQAPINP----YGKAKKMAEDIIL 232
Y+ST T+G +P + + P P++ Y + K +A+ +IL
Sbjct: 120 YTSTVNVTFGGKPIEQGNEDSIPYFPLDKHMDHYSRTKAIADQLIL 165
>UNIPROTKB|Q83AP4 [details] [associations]
symbol:CBU_1837 "UDP-glucose 4-epimerase" species:227377
"Coxiella burnetii RSA 493" [GO:0003824 "catalytic activity"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0044237 GO:GO:0003978
HOGENOM:HOG000168002 RefSeq:NP_820816.2 ProteinModelPortal:Q83AP4
PRIDE:Q83AP4 GeneID:1209749 KEGG:cbu:CBU_1837 PATRIC:17932405
OMA:RMRFDIV ProtClustDB:CLSK915066
BioCyc:CBUR227377:GJ7S-1811-MONOMER Uniprot:Q83AP4
Length = 346
Score = 133 (51.9 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 57/191 (29%), Positives = 83/191 (43%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
VLVTG GYIGS +LL Y V VD R G+ K+ Q P L+ I D+
Sbjct: 6 VLVTGAGGYIGSVLVPKLLNKGYHVKAVD---RFYFGSDKLSQH----P-HLELINEDV- 56
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAY-----VGESTLDPLKYYHNITSNTLVVLESMARHG 187
+ F+ D V+ AAV+ + E + + + S TL + + R+
Sbjct: 57 -RRLQPSLFTN--VDYVIDLAAVSNDPSGDIFEKATWEINHQARVQSATLAKQQKVKRY- 112
Query: 188 VDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRY 247
I S+C+ YG +K + E P+ Y KA + AE IL + + D V ++R
Sbjct: 113 ----ILPSSCSIYGF-QKGAVDETAKTNPLTTYAKANEKAEKEILPLATD-DFTVTVMRQ 166
Query: 248 FNVIGSDPEGR 258
V G P R
Sbjct: 167 ATVYGYSPRMR 177
Score = 40 (19.1 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 8/21 (38%), Positives = 9/21 (42%)
Query: 391 LQESLEIAWRWQKSHRGGYAS 411
L E + I W HR Y S
Sbjct: 259 LDEKIAIEWYGDPDHRSYYVS 279
>TIGR_CMR|CBU_1837 [details] [associations]
symbol:CBU_1837 "NAD-dependent epimerase/dehydratase
family protein, putative" species:227377 "Coxiella burnetii RSA
493" [GO:0008150 "biological_process" evidence=ND] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0044237
GO:GO:0003978 HOGENOM:HOG000168002 RefSeq:NP_820816.2
ProteinModelPortal:Q83AP4 PRIDE:Q83AP4 GeneID:1209749
KEGG:cbu:CBU_1837 PATRIC:17932405 OMA:RMRFDIV
ProtClustDB:CLSK915066 BioCyc:CBUR227377:GJ7S-1811-MONOMER
Uniprot:Q83AP4
Length = 346
Score = 133 (51.9 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 57/191 (29%), Positives = 83/191 (43%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
VLVTG GYIGS +LL Y V VD R G+ K+ Q P L+ I D+
Sbjct: 6 VLVTGAGGYIGSVLVPKLLNKGYHVKAVD---RFYFGSDKLSQH----P-HLELINEDV- 56
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAY-----VGESTLDPLKYYHNITSNTLVVLESMARHG 187
+ F+ D V+ AAV+ + E + + + S TL + + R+
Sbjct: 57 -RRLQPSLFTN--VDYVIDLAAVSNDPSGDIFEKATWEINHQARVQSATLAKQQKVKRY- 112
Query: 188 VDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRY 247
I S+C+ YG +K + E P+ Y KA + AE IL + + D V ++R
Sbjct: 113 ----ILPSSCSIYGF-QKGAVDETAKTNPLTTYAKANEKAEKEILPLATD-DFTVTVMRQ 166
Query: 248 FNVIGSDPEGR 258
V G P R
Sbjct: 167 ATVYGYSPRMR 177
Score = 40 (19.1 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 8/21 (38%), Positives = 9/21 (42%)
Query: 391 LQESLEIAWRWQKSHRGGYAS 411
L E + I W HR Y S
Sbjct: 259 LDEKIAIEWYGDPDHRSYYVS 279
>UNIPROTKB|Q4K8N4 [details] [associations]
symbol:wbpV "Putative UDP-glucose 4-epimerase WbpV"
species:220664 "Pseudomonas protegens Pf-5" [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=ISS] [GO:0006012
"galactose metabolic process" evidence=ISS] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000076
GenomeReviews:CP000076_GR GO:GO:0044237 GO:GO:0003978 GO:GO:0006012
HOGENOM:HOG000167991 RefSeq:YP_261399.1 ProteinModelPortal:Q4K8N4
STRING:Q4K8N4 GeneID:3481462 KEGG:pfl:PFL_4307 PATRIC:19878034
OMA:RRFVFIS BioCyc:PFLU220664:GIX8-4342-MONOMER Uniprot:Q4K8N4
Length = 320
Score = 132 (51.5 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 51/188 (27%), Positives = 87/188 (46%)
Query: 70 VTHVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIY 128
+ +L+TG +G++G L K S +++T+V + A + ++ G
Sbjct: 1 MARILLTGASGFVGGAVHECLSKHSPHKLTVVVRKPIPALAATTSVTQVEQIDG------ 54
Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYV-GESTLDPLKYYHNIT-SNTLVVLESMARH 186
L D ++ N V+H AA +V ES+LDPL+ + + TL + A+
Sbjct: 55 --LTDWSSI--LLDCNV---VVHAAARVHVMHESSLDPLEAFRKVNVEGTLNLARQAAQR 107
Query: 187 GVDTLIYSSTCATYGE--PEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMI 244
GV ++ S+ GE P +P T + AP +PYG +K AE + + + M V+I
Sbjct: 108 GVGRFVFISSIKVNGEGTPLNVPYTADDEPAPTDPYGISKMEAEKGLTLIASQTGMEVVI 167
Query: 245 LRYFNVIG 252
+R V G
Sbjct: 168 IRPVLVYG 175
>UNIPROTKB|P71790 [details] [associations]
symbol:gmdA "GDP-D-mannose dehydratase gmdA (GDP-mannose
4,6 dehydratase) (GMD)" species:83332 "Mycobacterium tuberculosis
H37Rv" [GO:0005886 "plasma membrane" evidence=IDA] [GO:0071456
"cellular response to hypoxia" evidence=IEP] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 InterPro:IPR016040 GO:GO:0005886
GenomeReviews:AL123456_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:BX842576 GO:GO:0071456 GO:GO:0005622
GO:GO:0019673 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
HOGENOM:HOG000168003 OMA:DAIRDWG HSSP:P32054 EMBL:CP003248
PIR:B70714 RefSeq:NP_216027.1 RefSeq:YP_006514898.1
ProteinModelPortal:P71790 SMR:P71790 PRIDE:P71790
EnsemblBacteria:EBMYCT00000003919 GeneID:13320108 GeneID:886529
KEGG:mtu:Rv1511 KEGG:mtv:RVBD_1511 PATRIC:18151910
TubercuList:Rv1511 ProtClustDB:CLSK791213 Uniprot:P71790
Length = 340
Score = 111 (44.1 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 43/153 (28%), Positives = 65/153 (42%)
Query: 74 LVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNIGAVKVLQELFPEPGRLQFI-YADL 131
L+TG G GS+ A LL Y V ++ S N + L +PG F+ Y DL
Sbjct: 5 LITGITGQDGSYLAELLLAKGYEVHGLIRRASTFNTSRIDHLYVDPHQPGARLFLHYGDL 64
Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
D + S D V + AA ++V S +P+ ++ +LE++ V
Sbjct: 65 IDGTRLVTLLSTIEPDEVYNLAAQSHVRVSFDEPVHTGDTTGMGSMRLLEAVRLSRVHCR 124
Query: 192 IYSSTCATYGEPEKMPITEETPQAPINPYGKAK 224
Y ++ + P E TP P +PYG AK
Sbjct: 125 FYQASSSEMFGASPPPQNELTPFYPRSPYGAAK 157
Score = 63 (27.2 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 23/88 (26%), Positives = 41/88 (46%)
Query: 303 VRDYIDVNDLVDAHVKALERAQPKKVGIYNVGTGKGRSVKEFVEACKKATSANIK--VIY 360
VRD+ + V+ + L+ +P + + TG+G +V+EF A + + + V +
Sbjct: 220 VRDWGYAPEYVEGMWRMLQTDEPDD---FVLATGRGFTVREFARAAFEHAGLDWQQYVKF 276
Query: 361 EPR--RPGDYAEVYSDPTKIRLELNWTA 386
+ R RP + + D TK L W A
Sbjct: 277 DQRYLRPTEVDSLIGDATKAAELLGWRA 304
>UNIPROTKB|F1MC60 [details] [associations]
symbol:LOC100847375 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006694 GeneTree:ENSGT00550000074557 EMBL:DAAA02057714
IPI:IPI00716728 Ensembl:ENSBTAT00000017350 OMA:PLEKHMD
Uniprot:F1MC60
Length = 391
Score = 133 (51.9 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 50/166 (30%), Positives = 76/166 (45%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
V+VTGGAGY+G L K V ++D L R EL P G +FI AD+
Sbjct: 11 VVVTGGAGYLGFSLGSSLAKSGTSVILLD-LRRPQ-------WELCP--GT-EFIQADVR 59
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
+A+A+++ F D V H A+ G L + T +V++ R V L+
Sbjct: 60 NAEALHRTFE--GVDCVFHVASYGMSGAEQLQKEQIESINVGGTKLVIDVCVRQRVPRLV 117
Query: 193 YSSTC--ATYGEPEKMPITEETPQAPINP----YGKAKKMAEDIIL 232
Y+ST A G+P + + P P+ Y + K +A+ +IL
Sbjct: 118 YTSTVNVAFGGKPIEQGDEDSVPYFPLEKHTDHYSRTKAIADQLIL 163
>UNIPROTKB|P72586 [details] [associations]
symbol:rfbD "GDP-D-mannose dehydratase" species:1111708
"Synechocystis sp. PCC 6803 substr. Kazusa" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0005622 EMBL:BA000022 GenomeReviews:BA000022_GR
GO:GO:0019673 eggNOG:COG1089 KO:K01711 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 HSSP:P32054 PIR:S74433
RefSeq:NP_439905.1 RefSeq:YP_005649960.1 ProteinModelPortal:P72586
SMR:P72586 IntAct:P72586 STRING:P72586 GeneID:12255298
GeneID:951882 KEGG:syn:sll1212 KEGG:syy:SYNGTS_0007 PATRIC:23836866
ProtClustDB:CLSK892430 Uniprot:P72586
Length = 362
Score = 132 (51.5 bits), Expect = 8.9e-06, P = 8.9e-06
Identities = 75/328 (22%), Positives = 128/328 (39%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNIGAVKVLQELFPEP----GRLQFI 127
VL+TG G GS+ + LL+ Y+V I+ S N + L+ +P +L+
Sbjct: 7 VLLTGITGQDGSYLSELLLEKGYQVHGIIRRTSTFNTDRI---DHLYVDPHDLEAKLRLH 63
Query: 128 YADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMA--- 184
Y DL D + + + + + A ++V S P ++ TL +LE++
Sbjct: 64 YGDLTDGTTLRRILEDVKPTEIYNLGAQSHVRVSFDSPEYTVDSVAMGTLRLLEAIRDYQ 123
Query: 185 -RHGVDTLIYSS-TCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAV 242
R G+ Y + + +G+ +++P E TP P +PY AK +++ ++ D+
Sbjct: 124 HRTGIQVRFYQAGSSEMFGKVQEIPQKETTPFYPRSPYACAKVYGHWQTVNYRESYDLFA 183
Query: 243 MILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTC 302
FN E+PR R ++ A I+AG + K D
Sbjct: 184 CNGILFN----------HESPR---RGETFVTRKITRAIARIVAGTQKK-LYLGNIDSK- 228
Query: 303 VRDYIDVNDLVDAHVKALERAQPKKVGIYNVGTGKGRSVKEFVEACKKATSANIKVIYEP 362
RD+ D V A L++ QP + T + + E N E
Sbjct: 229 -RDWGYAKDYVRAMWAMLQQEQPDDYVVATGETHEVKEFLEIAFGYVNLNWQNYVAFDER 287
Query: 363 R-RPGDYAEVYSDPTKIRLELNWTAKYT 389
RP + + DP K + +L W T
Sbjct: 288 YLRPAEVDLLIGDPAKTKAQLGWEPSVT 315
>UNIPROTKB|E2RC02 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070401 "NADP+ binding" evidence=IEA]
[GO:0019673 "GDP-mannose metabolic process" evidence=IEA]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 InterPro:IPR016040
Gene3D:3.40.50.720 GO:GO:0005622 GO:GO:0070401 GO:GO:0019673
GO:GO:0008446 TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640
OMA:DAIRDWG EMBL:AAEX03017462 Ensembl:ENSCAFT00000014648
Uniprot:E2RC02
Length = 300
Score = 130 (50.8 bits), Expect = 9.8e-06, P = 9.8e-06
Identities = 47/160 (29%), Positives = 82/160 (51%)
Query: 83 GSHAALRLLKDSYRVT-IVDNLSRGNIGAVKVLQELFPEP---GRLQFIYADLGDAKAVN 138
GS+ A LL+ Y V IV S N G ++ L + P+ G ++ Y DL D+ +
Sbjct: 7 GSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKN-PQAHIEGNMKLHYGDLTDSTCLV 65
Query: 139 KFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITS-NTLVVLESMARHGVDTLI--Y-S 194
K +E + + A ++V + + D +Y ++ TL +L+++ G+ + Y +
Sbjct: 66 KIINEVKPTEIYNLGAQSHV-KISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQA 124
Query: 195 STCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDF 234
ST YG+ +++P E TP P +PYG AK A I+++F
Sbjct: 125 STSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNF 164
>UNIPROTKB|G4MZC9 [details] [associations]
symbol:MGG_11399 "Sterol-4-alpha-carboxylate
3-dehydrogenase" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR002225
Pfam:PF01073 InterPro:IPR016040 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0006696 EMBL:CM001232
KO:K07748 GO:GO:0000252 RefSeq:XP_003713491.1
ProteinModelPortal:G4MZC9 EnsemblFungi:MGG_11399T0 GeneID:5051352
KEGG:mgr:MGG_11399 Uniprot:G4MZC9
Length = 371
Score = 131 (51.2 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 48/188 (25%), Positives = 86/188 (45%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
VLV GG G++GSH +R+L D Y+ + V S ++ + +E G +Q+ AD+
Sbjct: 13 VLVVGGCGFLGSHI-VRMLLDDYKCSAV---SAVDLRCTRNRRE-----G-VQYHDADIT 62
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
+A+ + F E D V+H A+ G S + +Y T V+E+ + GV L+
Sbjct: 63 NAERLVSVFDEVRPDVVIHTASPLAQGNSVVHRDIFYKVNVEGTRTVVEACKKAGVKALV 122
Query: 193 YSSTCATYGE--------PEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMI 244
++S+ + + E+ P+ Q Y K AE+I+L ++ +
Sbjct: 123 FTSSASVISDNVSDLINADERWPMIRGDKQTEY--YSDTKAEAEEIVLKANEPGKLLTAA 180
Query: 245 LRYFNVIG 252
+R + G
Sbjct: 181 IRPSGIFG 188
>WB|WBGene00017429 [details] [associations]
symbol:F13D11.4 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0016616 "oxidoreductase activity, acting on the
CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0009058
"biosynthetic process" evidence=IEA] InterPro:IPR002225
Pfam:PF01073 InterPro:IPR016040 eggNOG:COG0451 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
GeneTree:ENSGT00390000002618 HOGENOM:HOG000167998 EMBL:FO081142
PIR:T16059 RefSeq:NP_508978.3 ProteinModelPortal:Q19391 SMR:Q19391
PaxDb:Q19391 EnsemblMetazoa:F13D11.4.1 EnsemblMetazoa:F13D11.4.2
GeneID:184416 KEGG:cel:CELE_F13D11.4 UCSC:F13D11.4.1 CTD:184416
WormBase:F13D11.4 InParanoid:Q19391 OMA:ESDNERI NextBio:924666
Uniprot:Q19391
Length = 343
Score = 128 (50.1 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 49/173 (28%), Positives = 82/173 (47%)
Query: 71 THVLVTGGAGYIGSHAALRLLKDSYRV--TIVDNLSRGNIGAVKVLQELFPEPGRLQFIY 128
T VLVTG +G+IG+H LLK+ YRV T+ D ++ + +K L + L+ +
Sbjct: 6 TKVLVTGASGFIGTHCVEILLKNGYRVRGTVRDLNNKAKVQPIKKLDK----KNHLELVE 61
Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG- 187
ADL D+ K + D V+H A+ + + + T+ VL+++A G
Sbjct: 62 ADLLDSTCWKKAVA--GCDYVLHVASPFPI----VSDERCITTAVEGTMNVLKAIAEDGN 115
Query: 188 VDTLIYSSTCATYGE--PEKMPITEET----PQAPINPYGKAKKMAEDIILDF 234
V L+ +S+CA E + E++ ++ Y K+K +AE DF
Sbjct: 116 VRKLVLTSSCAAVNEGYTQDRVFDEDSWSNLESDMVDCYIKSKTLAEKAAWDF 168
Score = 41 (19.5 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 9/29 (31%), Positives = 18/29 (62%)
Query: 307 IDVNDLVDAHVKALERAQP--KKVGIYNV 333
+DV D+ AH +A+ R + +++ + NV
Sbjct: 223 VDVRDVALAHFEAMRRPESDNERILVTNV 251
>WB|WBGene00010166 [details] [associations]
symbol:gmd-2 species:6239 "Caenorhabditis elegans"
[GO:0019673 "GDP-mannose metabolic process" evidence=IEA;IDA]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IEA;IDA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0009058 "biosynthetic process"
evidence=IEA] [GO:0008831 "dTDP-4-dehydrorhamnose reductase
activity" evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0018991
"oviposition" evidence=IMP] [GO:0042350 "GDP-L-fucose biosynthetic
process" evidence=IDA] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0040007
GO:GO:0018991 GO:GO:0002119 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0010171 GO:GO:0040011 GO:GO:0005622
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
GeneTree:ENSGT00440000033640 GO:GO:0042350 OMA:DAIRDWG EMBL:Z81553
EMBL:AM231685 PIR:T22798 RefSeq:NP_493106.1 UniGene:Cel.18597
ProteinModelPortal:O45583 SMR:O45583 STRING:O45583 PaxDb:O45583
EnsemblMetazoa:F56H6.5 GeneID:186416 KEGG:cel:CELE_F56H6.5
UCSC:F56H6.5 CTD:186416 WormBase:F56H6.5 InParanoid:O45583
NextBio:931756 Uniprot:O45583
Length = 382
Score = 120 (47.3 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 49/172 (28%), Positives = 80/172 (46%)
Query: 74 LVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNIGAVKVLQELFPEP----GRLQFI- 127
L+TG G GS+ A LL Y+V I+ S N + + L+ P G F
Sbjct: 37 LITGITGQDGSYLAELLLSKGYKVHGIIRRSSSFNTARI---EHLYGNPVTHNGSASFSL 93
Query: 128 -YADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITS-NTLVVLESM-- 183
Y D+ D+ + K S + H AA ++V S D +Y + + TL +L+++
Sbjct: 94 HYGDMTDSSCLIKLISTIEPTEIYHLAAQSHVKVS-FDLPEYTAEVDAVGTLRLLDAIHA 152
Query: 184 ARHGVDTLIY-SSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDF 234
R Y +ST YG+ +++P +E TP P +PY AK I++++
Sbjct: 153 CRLTEKVRFYQASTSELYGKVQEIPQSELTPFYPRSPYAVAKMYGYWIVVNY 204
Score = 51 (23.0 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 14/49 (28%), Positives = 21/49 (42%)
Query: 343 EFVEACKKATSANIKVIYEPR--RPGDYAEVYSDPTKIRLELNWTAKYT 389
E V+ K ++V P+ RP + + +P K R L W K T
Sbjct: 312 EGVDEVGKNQDGVVRVKVSPKYYRPTEVETLLGNPAKARKTLGWEPKIT 360
>UNIPROTKB|O45583 [details] [associations]
symbol:gmd-2 "GDP-mannose 4,6 dehydratase 2" species:6239
"Caenorhabditis elegans" [GO:0019673 "GDP-mannose metabolic
process" evidence=IDA] [GO:0008446 "GDP-mannose 4,6-dehydratase
activity" evidence=IDA] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0040007
GO:GO:0018991 GO:GO:0002119 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0010171 GO:GO:0040011 GO:GO:0005622
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
GeneTree:ENSGT00440000033640 GO:GO:0042350 OMA:DAIRDWG EMBL:Z81553
EMBL:AM231685 PIR:T22798 RefSeq:NP_493106.1 UniGene:Cel.18597
ProteinModelPortal:O45583 SMR:O45583 STRING:O45583 PaxDb:O45583
EnsemblMetazoa:F56H6.5 GeneID:186416 KEGG:cel:CELE_F56H6.5
UCSC:F56H6.5 CTD:186416 WormBase:F56H6.5 InParanoid:O45583
NextBio:931756 Uniprot:O45583
Length = 382
Score = 120 (47.3 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 49/172 (28%), Positives = 80/172 (46%)
Query: 74 LVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNIGAVKVLQELFPEP----GRLQFI- 127
L+TG G GS+ A LL Y+V I+ S N + + L+ P G F
Sbjct: 37 LITGITGQDGSYLAELLLSKGYKVHGIIRRSSSFNTARI---EHLYGNPVTHNGSASFSL 93
Query: 128 -YADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITS-NTLVVLESM-- 183
Y D+ D+ + K S + H AA ++V S D +Y + + TL +L+++
Sbjct: 94 HYGDMTDSSCLIKLISTIEPTEIYHLAAQSHVKVS-FDLPEYTAEVDAVGTLRLLDAIHA 152
Query: 184 ARHGVDTLIY-SSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDF 234
R Y +ST YG+ +++P +E TP P +PY AK I++++
Sbjct: 153 CRLTEKVRFYQASTSELYGKVQEIPQSELTPFYPRSPYAVAKMYGYWIVVNY 204
Score = 51 (23.0 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 14/49 (28%), Positives = 21/49 (42%)
Query: 343 EFVEACKKATSANIKVIYEPR--RPGDYAEVYSDPTKIRLELNWTAKYT 389
E V+ K ++V P+ RP + + +P K R L W K T
Sbjct: 312 EGVDEVGKNQDGVVRVKVSPKYYRPTEVETLLGNPAKARKTLGWEPKIT 360
>TAIR|locus:2155036 [details] [associations]
symbol:GMD1 ""GDP-D-mannose 4,6-dehydratase 1""
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=ISM] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=IEA;ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0019673
"GDP-mannose metabolic process" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0005622 EMBL:AB022211 GO:GO:0019673
GO:GO:0042351 eggNOG:COG1089 KO:K01711 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 EMBL:AF195140
IPI:IPI00517362 RefSeq:NP_201429.1 UniGene:At.46822
ProteinModelPortal:Q9SNY3 SMR:Q9SNY3 IntAct:Q9SNY3 STRING:Q9SNY3
PaxDb:Q9SNY3 PRIDE:Q9SNY3 EnsemblPlants:AT5G66280.1 GeneID:836760
KEGG:ath:AT5G66280 TAIR:At5g66280 InParanoid:Q9SNY3
PhylomeDB:Q9SNY3 ProtClustDB:PLN02653 Genevestigator:Q9SNY3
GermOnline:AT5G66280 Uniprot:Q9SNY3
Length = 361
Score = 128 (50.1 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 88/359 (24%), Positives = 144/359 (40%)
Query: 74 LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGR-----LQFIY 128
LVTG G GS+ LL+ Y V + S N + L ++ +P ++ Y
Sbjct: 20 LVTGITGQDGSYLTEFLLEKGYEVHGLIRRS-SNFNTQR-LNHIYVDPHNVNKALMKLHY 77
Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV 188
DL DA ++ ++ D V + AA ++V S P + + L +LE++ H +
Sbjct: 78 GDLSDASSLRRWLDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHNI 137
Query: 189 DT---LIY--SSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVM 243
D + Y + + +G P +E TP P +PY +K A +++ + A
Sbjct: 138 DNGRAIKYYQAGSSEMFGSTPP-PQSETTPFHPRSPYAASKCAAHWYTVNYRE----AYG 192
Query: 244 ILRYFNVIGSDPEGRLGE--APRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGT 301
+ ++ + R GE R R GRI GL+ K +
Sbjct: 193 LYACNGILFNHESPRRGENFVTRKITRALGRIK-----------VGLQTK---LFLGNIQ 238
Query: 302 CVRDYIDVNDLVDAHVKALERAQPKKVGIYNVGTGKGRSVKEFVEACKKATSANIK--VI 359
RD+ D V+A L++ +P Y V T + +VKEF++ N K V
Sbjct: 239 ASRDWGFAGDYVEAMWLMLQQEKPDD---YVVATEESHTVKEFLDVSFGYVGLNWKDHVE 295
Query: 360 YEPR--RPGDYAEVYSDPTKIRLELNWTAK--YTNL-----QESLEIAWRWQKSHRGGY 409
+ R RP + + D +K + L W K + L E LE+A R + GY
Sbjct: 296 IDKRYFRPTEVDNLKGDASKAKEMLGWKPKVGFEKLVKMMVDEDLELAKREKVLADAGY 354
>UNIPROTKB|A6NKP2 [details] [associations]
symbol:SDR42E2 "Putative short-chain
dehydrogenase/reductase family 42E member 2" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006694 HOGENOM:HOG000168007 EMBL:AC009019 IPI:IPI00396920
ProteinModelPortal:A6NKP2 SMR:A6NKP2 STRING:A6NKP2
PhosphoSite:A6NKP2 PRIDE:A6NKP2 Ensembl:ENST00000330898
GeneCards:GC16P022176 HGNC:HGNC:35414 neXtProt:NX_A6NKP2
InParanoid:A6NKP2 OrthoDB:EOG4QNMWF NextBio:20777820 Bgee:A6NKP2
Genevestigator:A6NKP2 Uniprot:A6NKP2
Length = 422
Score = 129 (50.5 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 48/166 (28%), Positives = 72/166 (43%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
VLVTGG GY+G L K V ++D + EL PE +FI AD+
Sbjct: 36 VLVTGGGGYLGFSLGSHLAKSGTSVILLDRR--------RPQWELSPET---KFIQADVR 84
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
D +A+ + F D V H A+ G L + T +V++ R V LI
Sbjct: 85 DEEALYRAFE--GVDCVFHVASYGMSGAEKLQKEQIESINVGGTKLVIDVCVRRRVPRLI 142
Query: 193 YSSTC--ATYGEPEKMPITEETPQAPINP----YGKAKKMAEDIIL 232
Y+ST A G+P + + P P++ Y + K +A+ + L
Sbjct: 143 YTSTVNVAFGGKPIEQGDEDSVPYFPLDEHVDHYSRTKAIADQLTL 188
>TAIR|locus:2030973 [details] [associations]
symbol:GER2 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA;ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0042350 "GDP-L-fucose biosynthetic process"
evidence=ISS] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0006857 "oligopeptide transport" evidence=RCA]
InterPro:IPR001509 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 EMBL:CP002684 GenomeReviews:CT485782_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AC034106 GO:GO:0016853 HOGENOM:HOG000168011 KO:K02377
ProtClustDB:PLN02725 GO:GO:0050577 GO:GO:0042351 EMBL:AY063880
EMBL:AY096364 IPI:IPI00526329 PIR:B86314 RefSeq:NP_564040.1
UniGene:At.15825 ProteinModelPortal:Q9LMU0 SMR:Q9LMU0 STRING:Q9LMU0
PaxDb:Q9LMU0 PRIDE:Q9LMU0 EnsemblPlants:AT1G17890.1 GeneID:838368
KEGG:ath:AT1G17890 GeneFarm:5163 TAIR:At1g17890 InParanoid:Q9LMU0
OMA:IHCAGRV PhylomeDB:Q9LMU0 Genevestigator:Q9LMU0
GermOnline:AT1G17890 Uniprot:Q9LMU0
Length = 328
Score = 107 (42.7 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 28/102 (27%), Positives = 51/102 (50%)
Query: 300 GTCVRDYIDVNDLVDAHVKALERAQPKKVGIYNVGTGKGRSVKEFVEACKKATSANIKVI 359
G+ +R+++ V+DL DA V ++ Q NVG+G ++KE E K+ K++
Sbjct: 221 GSPLREFLHVDDLADACVFLMD--QYSGFEHVNVGSGVEVTIKELAELVKEVVGFKGKLV 278
Query: 360 YEPRRPGDYAEVYSDPTKIRLELNWTAKYTNLQESLEIAWRW 401
++ +P D +K+ L WT K + L++ L + W
Sbjct: 279 WDTTKPDGTPRKLMDSSKLA-SLGWTPKIS-LKDGLSQTYEW 318
Score = 61 (26.5 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 35/147 (23%), Positives = 59/147 (40%)
Query: 90 LLKDSYRVTIVDNLSRGNIGA--VKVLQEL-FPEPGRLQFIYADLGDAKAVNKFFS-ENA 145
+L+ S ++ + + RG +G+ V+ LQ+ F DL V FF+ E
Sbjct: 15 MLEKSAKIFVAGH--RGLVGSAIVRKLQDQGFTNLVLRTHSELDLTSQSDVESFFATEKP 72
Query: 146 FDAVMHFAAVAYVGESTLDPLKYYH-NITSNTLVVLESMARHGVDTLIYSSTCATYGEPE 204
++ A V + + P + N+ T V+ S HGV L++ + Y +
Sbjct: 73 VYVILAAAKVGGIHANNTYPADFIGVNLQIQTNVI-HSAYTHGVKKLLFLGSSCIYPKFA 131
Query: 205 KMPITEET----PQAPINPYGKAKKMA 227
PI E P P N + K+A
Sbjct: 132 PQPIPESALLTGPLEPTNEWYAIAKIA 158
>UNIPROTKB|F1RPD6 [details] [associations]
symbol:SDR42E2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006694 "steroid biosynthetic process" evidence=IEA]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
GeneTree:ENSGT00550000074557 OMA:PLEKHMD EMBL:CU972409
Ensembl:ENSSSCT00000008592 Uniprot:F1RPD6
Length = 392
Score = 128 (50.1 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 49/166 (29%), Positives = 73/166 (43%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
VLVTGG GY+G L K V ++D L R EL P G +FI AD+
Sbjct: 11 VLVTGGGGYLGFTLGSSLAKSGISVILLD-LRRPQ-------WELCP--GT-EFIQADVR 59
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
DA+A+++ F D V H A+ G L + T +V++ R V LI
Sbjct: 60 DAEALHQAFE--GVDCVFHVASYGMSGAEKLQKEQIESINVGGTKLVIDVCVRRRVPRLI 117
Query: 193 YSSTCATY--GEPEKMPITEETPQAPINP----YGKAKKMAEDIIL 232
Y+S+ G+P + + P P+ Y + K +A+ + L
Sbjct: 118 YTSSVNVVFGGKPIEQGDEDSVPYVPLEKHMDHYSRTKAIADQLTL 163
>UNIPROTKB|P77398 [details] [associations]
symbol:arnA "fused UDP-L-Ara4N formyltransferase and
UDP-GlcA C-4''-decarboxylase" species:83333 "Escherichia coli K-12"
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008168 "methyltransferase
activity" evidence=IEA] [GO:0032259 "methylation" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0046677
"response to antibiotic" evidence=IEA;IDA] [GO:0016742
"hydroxymethyl-, formyl- and related transferase activity"
evidence=IEA;IDA] [GO:0016616 "oxidoreductase activity, acting on
the CH-OH group of donors, NAD or NADP as acceptor" evidence=IDA]
[GO:0009245 "lipid A biosynthetic process" evidence=IEA;IDA]
UniPathway:UPA00032 HAMAP:MF_01166 InterPro:IPR001509
InterPro:IPR002376 InterPro:IPR005793 InterPro:IPR011034
InterPro:IPR021168 Pfam:PF00551 Pfam:PF01370 Pfam:PF02911
PIRSF:PIRSF036506 UniPathway:UPA00030 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR SUPFAM:SSF50486 GO:GO:0046677 GO:GO:0009245
GO:GO:0016616 GO:GO:0016742 GO:GO:0008168 Gene3D:3.10.25.10
Gene3D:3.40.50.170 SUPFAM:SSF53328 GO:GO:0009103 EMBL:AY057445
PIR:E64996 RefSeq:NP_416758.1 RefSeq:YP_490494.1 PDB:1U9J PDB:1YRW
PDB:1Z73 PDB:1Z74 PDB:1Z75 PDB:1Z7B PDB:1Z7E PDB:2BLL PDB:2BLN
PDBsum:1U9J PDBsum:1YRW PDBsum:1Z73 PDBsum:1Z74 PDBsum:1Z75
PDBsum:1Z7B PDBsum:1Z7E PDBsum:2BLL PDBsum:2BLN
ProteinModelPortal:P77398 SMR:P77398 DIP:DIP-11961N IntAct:P77398
MINT:MINT-1257581 PaxDb:P77398 PRIDE:P77398
EnsemblBacteria:EBESCT00000003653 EnsemblBacteria:EBESCT00000017866
GeneID:12931503 GeneID:947683 KEGG:ecj:Y75_p2218 KEGG:eco:b2255
PATRIC:32119875 EchoBASE:EB3844 EcoGene:EG14091
HOGENOM:HOG000247761 KO:K10011 OMA:VRYCVKY ProtClustDB:PRK08125
BioCyc:EcoCyc:G7168-MONOMER BioCyc:ECOL316407:JW2249-MONOMER
BioCyc:MetaCyc:G7168-MONOMER SABIO-RK:P77398
EvolutionaryTrace:P77398 Genevestigator:P77398 Uniprot:P77398
Length = 660
Score = 130 (50.8 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 69/287 (24%), Positives = 120/287 (41%)
Query: 71 THVLVTGGAGYIGSHAALRLLK-DSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYA 129
T VL+ G G+IG+H RLL+ D Y V +D IG+ + P F+
Sbjct: 316 TRVLILGVNGFIGNHLTERLLREDHYEVYGLD------IGS-DAISRFLNHP-HFHFVEG 367
Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD 189
D+ ++ + D V+ A+A E T +PL+ + L ++ ++
Sbjct: 368 DISIHSEWIEYHVKKC-DVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-K 425
Query: 190 TLIYSSTCATYGEPEKMPITEETPQ---APIN-P---YGKAKKMAEDIILDFSKNSDMAV 242
+I+ ST YG E+ P+N P Y +K++ + +I + + +
Sbjct: 426 RIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQF 485
Query: 243 MILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADG-T 301
+ R FN +G PR + RI + A +I L V+G+ DG
Sbjct: 486 TLFRPFNWMG----------PRLDNLNAARIGSS--RAITQLILNL-VEGSPIKLIDGGK 532
Query: 302 CVRDYIDVNDLVDAHVKALERAQPKKVG-IYNVGTGKGR-SVKEFVE 346
R + D+ D ++A + +E A + G I N+G + S++E E
Sbjct: 533 QKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGE 579
>UNIPROTKB|Q5QPP9 [details] [associations]
symbol:GALE "UDP-glucose 4-epimerase" species:9606 "Homo
sapiens" [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0006012 "galactose metabolic process"
evidence=IEA] InterPro:IPR005886 HOGENOM:HOG000168001 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 EMBL:AL031295 UniGene:Hs.632380 HGNC:HGNC:4116
SMR:Q5QPP9 Ensembl:ENST00000456977 Uniprot:Q5QPP9
Length = 108
Score = 105 (42.0 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 28/84 (33%), Positives = 41/84 (48%)
Query: 330 IYNVGTGKGR--SVKEFVEACKKATSANIKVIYEPRRPGDYAEVYSDPTKIRLELNWTAK 387
I+ V KG ++++ E C KV+ RR GD A Y++P+ + EL WTA
Sbjct: 28 IHVVDLAKGHIAALRKLKEQC--GCRIPYKVV--ARREGDVAACYANPSLAQEELGWTAA 83
Query: 388 YTNLQESLEIAWRWQKSHRGGYAS 411
L E WRWQK + G+ +
Sbjct: 84 L-GLDRMCEDLWRWQKQNPSGFGT 106
Score = 97 (39.2 bits), Expect = 0.00030, P = 0.00030
Identities = 20/35 (57%), Positives = 22/35 (62%)
Query: 288 LKVKGTDYSTADGTCVRDYIDVNDLVDAHVKALER 322
L V G DY T DGT VRDYI V DL H+ AL +
Sbjct: 9 LNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRK 43
>UNIPROTKB|Q9KV94 [details] [associations]
symbol:VC_0262 "UDP-glucose 4-epimerase" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=ISS] [GO:0006012
"galactose metabolic process" evidence=ISS] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0044237
GO:GO:0003978 GO:GO:0006012 HOGENOM:HOG000167991 OMA:RRFVFIS
PIR:D82345 RefSeq:NP_229918.1 ProteinModelPortal:Q9KV94
DNASU:2614880 GeneID:2614880 KEGG:vch:VC0262 PATRIC:20079564
ProtClustDB:CLSK793549 Uniprot:Q9KV94
Length = 323
Score = 125 (49.1 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 48/178 (26%), Positives = 78/178 (43%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
+LVTG +G++G LR+L + NIG V Q +P + + D+
Sbjct: 11 ILVTGASGFVG----LRVLTQAQ-----------NIGYALVAQSRSQQPYSFEQVLLDIT 55
Query: 133 DAKAVNKFFSENAFDAVMHFAA-VAYVGESTLDPLKYYHNI-TSNTLVVLESMARHGVDT 190
+ D V+H AA V + E+ D LK Y ++ T TL + + GV
Sbjct: 56 PNTDWERALV--GVDCVVHCAARVHQMQETEADALKAYRDVNTQGTLNLAKQAVSAGVKR 113
Query: 191 LIYSSTCATYGEPEKM--PITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILR 246
I+ S+ GE K + P +PYG +K AE +L+ + + + V+I+R
Sbjct: 114 FIFLSSIKVNGEQTKAGSAFQHDDQHIPSDPYGLSKYEAEQQLLELAAETGLEVVIIR 171
>TIGR_CMR|VC_0262 [details] [associations]
symbol:VC_0262 "UDP-glucose 4-epimerase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=ISS] [GO:0006012 "galactose
metabolic process" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 HOGENOM:HOG000167991 OMA:RRFVFIS PIR:D82345
RefSeq:NP_229918.1 ProteinModelPortal:Q9KV94 DNASU:2614880
GeneID:2614880 KEGG:vch:VC0262 PATRIC:20079564
ProtClustDB:CLSK793549 Uniprot:Q9KV94
Length = 323
Score = 125 (49.1 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 48/178 (26%), Positives = 78/178 (43%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
+LVTG +G++G LR+L + NIG V Q +P + + D+
Sbjct: 11 ILVTGASGFVG----LRVLTQAQ-----------NIGYALVAQSRSQQPYSFEQVLLDIT 55
Query: 133 DAKAVNKFFSENAFDAVMHFAA-VAYVGESTLDPLKYYHNI-TSNTLVVLESMARHGVDT 190
+ D V+H AA V + E+ D LK Y ++ T TL + + GV
Sbjct: 56 PNTDWERALV--GVDCVVHCAARVHQMQETEADALKAYRDVNTQGTLNLAKQAVSAGVKR 113
Query: 191 LIYSSTCATYGEPEKM--PITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILR 246
I+ S+ GE K + P +PYG +K AE +L+ + + + V+I+R
Sbjct: 114 FIFLSSIKVNGEQTKAGSAFQHDDQHIPSDPYGLSKYEAEQQLLELAAETGLEVVIIR 171
>UNIPROTKB|Q48FN6 [details] [associations]
symbol:PSPPH_3658 "UDP-glucose 4-epimerase, putative"
species:264730 "Pseudomonas syringae pv. phaseolicola 1448A"
[GO:0003978 "UDP-glucose 4-epimerase activity" evidence=ISS]
[GO:0006012 "galactose metabolic process" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
EMBL:CP000058 GenomeReviews:CP000058_GR GO:GO:0003978 GO:GO:0006012
HOGENOM:HOG000167991 RefSeq:YP_275800.1 ProteinModelPortal:Q48FN6
STRING:Q48FN6 GeneID:3557056 KEGG:psp:PSPPH_3658 PATRIC:19976742
OMA:LEGWCAM ProtClustDB:CLSK458037 Uniprot:Q48FN6
Length = 326
Score = 125 (49.1 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 56/191 (29%), Positives = 89/191 (46%)
Query: 70 VTHVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIY 128
V V +TG G++GS RL+K + + V + GA E R+ +
Sbjct: 5 VALVAITGATGFVGSAVVRRLIKHTGHSVRVAVR------GAYSCSSE------RINVVS 52
Query: 129 ADLGDAKAVNKFFSENAFDA--VMHFAAVAYVGESTLD-P-LKYYH-NITSNTLVVLESM 183
A+ + A + +S+ A V+H AA +V T D P +Y+ N+T+ TL + E
Sbjct: 53 AE---SLAPDNQWSDLVTGAHVVIHCAARVHVLNETADEPDQEYFRANVTA-TLNLAEQA 108
Query: 184 ARHGVDTLIYSSTCATYGE--PEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMA 241
A GV I+ S+ GE P + P P++ YG +K+ AE+ + + S S M
Sbjct: 109 AAAGVRRFIFLSSIKANGEFTHPGAPFRADDPCNPLDAYGVSKQKAEEGLRELSARSGMQ 168
Query: 242 VMILRYFNVIG 252
V+I+R V G
Sbjct: 169 VVIIRPVLVYG 179
>TAIR|locus:2080933 [details] [associations]
symbol:MUR1 "MURUS 1" species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IEA;ISS;IDA] [GO:0019673 "GDP-mannose metabolic process"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009826 "unidimensional cell growth" evidence=IMP] [GO:0005829
"cytosol" evidence=IDA] [GO:0006007 "glucose catabolic process"
evidence=RCA] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IMP] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0005525
GO:GO:0005829 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009826 EMBL:AL132980
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 ProtClustDB:PLN02653
EMBL:U81805 EMBL:BT025710 EMBL:AY084574 IPI:IPI00519785 PIR:T45747
RefSeq:NP_190685.2 UniGene:At.23910 PDB:1N7G PDB:1N7H PDBsum:1N7G
PDBsum:1N7H ProteinModelPortal:P93031 SMR:P93031 STRING:P93031
PaxDb:P93031 PRIDE:P93031 EnsemblPlants:AT3G51160.1 GeneID:824280
KEGG:ath:AT3G51160 GeneFarm:4170 TAIR:At3g51160 InParanoid:P93031
OMA:DAIRDWG PhylomeDB:P93031 BioCyc:MetaCyc:AT3G51160-MONOMER
EvolutionaryTrace:P93031 Genevestigator:P93031 GermOnline:AT3G51160
Uniprot:P93031
Length = 373
Score = 126 (49.4 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 87/359 (24%), Positives = 146/359 (40%)
Query: 74 LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGR-----LQFIY 128
L+TG G GS+ LL Y V + S N ++ ++ +P ++ Y
Sbjct: 32 LITGITGQDGSYLTEFLLGKGYEVHGLIRRS-SNFNTQRI-NHIYIDPHNVNKALMKLHY 89
Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV 188
ADL DA ++ ++ D V + AA ++V S P + + L +LE++ H +
Sbjct: 90 ADLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTI 149
Query: 189 D---TLIY--SSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVM 243
D T+ Y + + +G P +E TP P +PY +K A +++ + A
Sbjct: 150 DSGRTVKYYQAGSSEMFGSTPP-PQSETTPFHPRSPYAASKCAAHWYTVNYRE----AYG 204
Query: 244 ILRYFNVIGSDPEGRLGE--APRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGT 301
+ ++ + R GE R R GRI GL+ K +
Sbjct: 205 LFACNGILFNHESPRRGENFVTRKITRALGRIK-----------VGLQTK---LFLGNLQ 250
Query: 302 CVRDYIDVNDLVDAHVKALERAQPKKVGIYNVGTGKGRSVKEFVEACKKATSANIK--VI 359
RD+ D V+A L++ +P Y V T +G +V+EF++ N K V
Sbjct: 251 ASRDWGFAGDYVEAMWLMLQQEKPDD---YVVATEEGHTVEEFLDVSFGYLGLNWKDYVE 307
Query: 360 YEPR--RPGDYAEVYSDPTKIRLELNWTAK--YTNL-----QESLEIAWRWQKSHRGGY 409
+ R RP + + D +K + L W + + L E LE+A R + GY
Sbjct: 308 IDQRYFRPAEVDNLQGDASKAKEVLGWKPQVGFEKLVKMMVDEDLELAKREKVLVDAGY 366
>TIGR_CMR|SO_3167 [details] [associations]
symbol:SO_3167 "dTDP-glucose 4,6-dehydratase"
species:211586 "Shewanella oneidensis MR-1" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0008460
TIGRFAMs:TIGR01181 HSSP:P27830 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 RefSeq:NP_718723.1 ProteinModelPortal:Q8ECH5
SMR:Q8ECH5 GeneID:1170861 KEGG:son:SO_3167 PATRIC:23526018
OMA:IDLIIHK ProtClustDB:CLSK907039 Uniprot:Q8ECH5
Length = 343
Score = 120 (47.3 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 46/190 (24%), Positives = 83/190 (43%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
+LVTGGAG+IGS A +R+L + ++V N + + + R F+ AD+
Sbjct: 3 ILVTGGAGFIGS-ALVRMLIEQTE-SVVLNFDKLTYASHPESLAGVADNERYHFVQADIC 60
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLES---------M 183
D + + + D +MH AA ++V S P ++ T +LE+
Sbjct: 61 DRARLEQVLQQFQPDLMMHLAAESHVDRSIDGPAEFIQTNIVGTYTLLEACRSYYQTLGQ 120
Query: 184 ARHGVDTLIYSSTCATYGEPEKMPITEETPQA-PINPYGKAKKMAEDIILDFSKNSDMAV 242
A+ L + ST +G + + ET P +PY +K A+ ++ + + + +
Sbjct: 121 AQQRRFRLHHISTDEVFGSLTETGLFSETSAYDPSSPYSASKASADHLVRAWHRTYALPI 180
Query: 243 MILRYFNVIG 252
+I N G
Sbjct: 181 VITNCSNNYG 190
Score = 45 (20.9 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 15/41 (36%), Positives = 17/41 (41%)
Query: 360 YEPRRPGDYAEVYSDPTKIRLELNWTAKYTNLQESLEIAWR 400
Y RPG D +KI+ EL W QES E R
Sbjct: 292 YVVDRPGHDVRYAIDASKIQRELGWRP-----QESFESGLR 327
Score = 38 (18.4 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 29/120 (24%), Positives = 53/120 (44%)
Query: 299 DGTCVRDYIDVNDLVDAHVKALER-AQPKKVG-IYNVGTGKGRSVKEFVEACKKATSANI 356
+G VRD++ V+D HVKAL A ++G YN+G G + + + S
Sbjct: 217 NGQQVRDWLYVDD----HVKALYLVATQGQLGQTYNIG---GSCEQTNLTVVRHICSLLE 269
Query: 357 KVIYEPRRPGDYA---EVYSDPTKIRLE-----LNWTAKYTNLQESLEIAWRWQKSHRGG 408
+++ P P A ++D + ++ + + + +Q E+ WR Q+S G
Sbjct: 270 ELV--PTHPQSLAMGNAGFADLIQYVVDRPGHDVRYAIDASKIQR--ELGWRPQESFESG 325
>UNIPROTKB|G4MQ64 [details] [associations]
symbol:MGG_02304 "Leucoanthocyanidin reductase"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 EMBL:CM001231 RefSeq:XP_003709069.1
ProteinModelPortal:G4MQ64 EnsemblFungi:MGG_02304T0 GeneID:2681401
KEGG:mgr:MGG_02304 Uniprot:G4MQ64
Length = 354
Score = 123 (48.4 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 90/337 (26%), Positives = 137/337 (40%)
Query: 74 LVTGGAGYIGSHAALRLLKDSYRV-TIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
LVTGG GYIG H LL + V T V + + A+ L++ +PGRLQ +ADL
Sbjct: 10 LVTGGNGYIGLHVVTALLSKGFIVHTTVRSNKFKKVAALYALRDRH-QPGRLQIFHADLL 68
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLD-PLKYYHNITSNTLVVLESMAR-HGVDT 190
+ K + V H A+ + E D + VL S+ + V
Sbjct: 69 RPGSFTK--AMKGCTVVHHIASPFLLPEDIKDGETQCIIPAVEGARNVLASVNETYSVKR 126
Query: 191 LIY-SSTCATYGEP----EKMP--ITEE----TPQAPINPYGKAKKMAEDIILDFSKNSD 239
+++ SS A YG+ E M +TEE T + P+ +K +AE SK
Sbjct: 127 VVFMSSVGAIYGDSRDVIEYMDGTLTEEYWNETSTSHHYPFHYSKVLAEKEAWMISKEQS 186
Query: 240 MAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTAD 299
M+ VI P LG P L + G SG+ R I G G
Sbjct: 187 RWDMV-----VIC--PGLALG----PSLSQDGSDSGSVVLMNR-IFGGQLFFGAP----- 229
Query: 300 GTCVRDYIDVNDLVDAHVKALERAQPKKVGIYNVGTGKGRSVKEFVEACKKATSANIKVI 359
+DV ++ AHV+A + P G Y + + RS+ + C++ A+ ++I
Sbjct: 230 -NLHLPVVDVREVATAHVQAADL--PWASGRYILAATETRSLGDIARICRRQKGAS-RLI 285
Query: 360 YEPRRPGDYAEVYSDPTKIRLELNWTAKYTNLQESLE 396
+ P D+ P IRL W ++ + SL+
Sbjct: 286 PTHKVP-DFLLRICAPW-IRLSQYWLSRNLGVGFSLD 320
>DICTYBASE|DDB_G0284553 [details] [associations]
symbol:gmd "GDP-mannose dehydratase" species:44689
"Dictyostelium discoideum" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0019673 "GDP-mannose metabolic process"
evidence=IEA] [GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA;ISS] [GO:0016829 "lyase activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 dictyBase:DDB_G0284553
GenomeReviews:CM000153_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0005622 EMBL:AAFI02000066 GO:GO:0019673
GO:GO:0042351 eggNOG:COG1089 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 RefSeq:XP_001134543.1 ProteinModelPortal:Q1ZXF7
SMR:Q1ZXF7 STRING:Q1ZXF7 EnsemblProtists:DDB0231676 GeneID:8624624
KEGG:ddi:DDB_G0284553 ProtClustDB:CLSZ2432853 Uniprot:Q1ZXF7
Length = 356
Score = 123 (48.4 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 85/340 (25%), Positives = 144/340 (42%)
Query: 74 LVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNIGAVKVLQ---ELFPEPGRLQFIYA 129
L+TG G GS+ L+ Y V I+ + VK + ++ E L Y
Sbjct: 9 LITGITGQDGSYLTEFLISKGYYVHGIIQKIFHHFNTIVKNIYIKIDMLKEKESLTLHYG 68
Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITS-NTLVVLESMARHGV 188
DL DA ++ S+ + + A ++V S D +Y ++ L +L+++ G+
Sbjct: 69 DLTDASNLHSIVSKVNPTEIYNLGAQSHVKVS-FDMSEYTGDVDGLGCLRLLDAIRSCGM 127
Query: 189 DTLI-Y--SSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMIL 245
+ + Y +ST YG+ +++P +E TP P +PY AK+ A I++++ + DM
Sbjct: 128 EKKVKYYQASTSELYGKVQEIPQSETTPFYPRSPYAVAKQYAYWIVVNYREAYDMYACNG 187
Query: 246 RYFNVIGSDPEGRLGEAPRPELREHGR-ISG-ACFDAARGIIAGLKVKGTDYSTADGTCV 303
FN P R G P R+ R ++G AC R I L G + D
Sbjct: 188 ILFN--HESP--RRG--PTFVTRKITRFVAGIAC---GRDEILYL---GNINAKRDWGHA 235
Query: 304 RDYIDV----------NDLV----DAH-VKALERAQPKKVGIYNVGTGKGRSVKEFVEA- 347
RDY++ D V + H V+ K++ I + +G + KE E
Sbjct: 236 RDYVEAMWLMLQQEKPEDFVIATGETHSVREFVEKSFKEIDI--IIKWRGEAEKE--EGY 291
Query: 348 CKKATSANIKVIYEPRRPGDYAEVYSDPTKIRLELNWTAK 387
C+K +K+ + RP + + +P K + L W K
Sbjct: 292 CEKTGKVYVKIDEKYYRPTEVDLLLGNPNKAKKLLQWQIK 331
>TIGR_CMR|CJE_1612 [details] [associations]
symbol:CJE_1612 "GDP-L-fucose synthetase" species:195099
"Campylobacter jejuni RM1221" [GO:0009242 "colanic acid
biosynthetic process" evidence=ISS] [GO:0050577 "GDP-L-fucose
synthase activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:CP000025 GenomeReviews:CP000025_GR
HOGENOM:HOG000168011 KO:K02377 GO:GO:0050577 OMA:IHCAGRV
GO:GO:0042350 RefSeq:YP_179593.1 ProteinModelPortal:Q5HSZ2
STRING:Q5HSZ2 GeneID:3232240 KEGG:cjr:CJE1612 PATRIC:20045021
BioCyc:CJEJ195099:GJC0-1642-MONOMER Uniprot:Q5HSZ2
Length = 349
Score = 97 (39.2 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 25/92 (27%), Positives = 42/92 (45%)
Query: 316 HVKALERAQPKKVGIYNVGTGKGRSVKEFVEACKKATSANIKVIYEPRRPGDYAEVYSDP 375
H+ ++R P N+G K S+KE K + Y +P E +
Sbjct: 262 HINKIDRDNPH----INIGPEKNYSIKELAYLLKTVIQFEGEFRYNLSKPDGTYEKLTCC 317
Query: 376 TKIRLELNWTAKYTNLQESLEIAWRWQKSHRG 407
KI+ ++NW A YT L++ + + W KS++G
Sbjct: 318 DKIK-QMNWQA-YTKLEDGIRSTFHWYKSNKG 347
Score = 68 (29.0 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 34/117 (29%), Positives = 52/117 (44%)
Query: 105 RGNIGAVKVLQELFPEPGRLQFIYA-----DLGDAKAVNKFFSENAFDAVMHFAAVAYVG 159
RG +G+ +L++L + G IY DL D AV FF + D V F A +G
Sbjct: 13 RGLVGSA-ILRKL-KDNGYENLIYKTHSELDLTDQSAVKFFFEKEKPDFV--FLCAAKLG 68
Query: 160 ESTLDPLKY-----YHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEE 211
K+ Y N+ V+ +S + V L++ S+ + Y E +PI EE
Sbjct: 69 GMDAHR-KFRAEFIYDNLQIQNNVIHQSYINN-VKKLLFISSTSVYPEHASLPIKEE 123
>UNIPROTKB|G4NH85 [details] [associations]
symbol:MGG_12095 "NADPH-dependent methylglyoxal reductase
GRE2" species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 EMBL:CM001236 RefSeq:XP_003719963.1
ProteinModelPortal:G4NH85 EnsemblFungi:MGG_12095T0 GeneID:5049859
KEGG:mgr:MGG_12095 Uniprot:G4NH85
Length = 351
Score = 122 (48.0 bits), Expect = 0.00011, P = 0.00011
Identities = 72/297 (24%), Positives = 127/297 (42%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSYRV-TIVDNLSRGNIGAVKVLQELFPEPGR--LQF-IY 128
VL+TGG+G+I +H +LL+ Y+V T V + + K++++ P + L I
Sbjct: 7 VLLTGGSGFIAAHTLDQLLEKGYKVITTVRSEEKA-----KIIRDAHPNVDKDALDIAIV 61
Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH-- 186
D+ A ++ + V+H A+ + DP + T +L+++AR
Sbjct: 62 PDIAKPDAFDEVVKMPGIELVLHTASPFHFNIG--DPKELIDPAVIGTTGILKAIARSAP 119
Query: 187 GVDTLIYSSTCATYGEPEKM-------------PITEE----TPQAPINPYGKAKKMAED 229
GV ++ +S+ A +P + PIT E P N Y +KK+AE+
Sbjct: 120 GVKRVVITSSFAAVVDPNRATDPNTVFDESSWNPITLEKALSNPNDKPNAYRASKKLAEE 179
Query: 230 IILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLK 289
F ++ V F++ +P LG P + + R I++ L+
Sbjct: 180 AAWAFVRDPASDVK----FDLATINPPMVLG----PVVPYFTNLESVNTSNER-IVSLLR 230
Query: 290 VKGT-DYSTADGTCVRDYIDVNDLVDAHVKALE--RAQPKKVGIYNVGTGKGRSVKE 343
K D + D +IDV D+ +AH++A+E A K++ GT R + E
Sbjct: 231 GKWKEDNAIPDTGLAFIWIDVRDVAEAHIRAMEVPEAGGKRL-FTTAGTFSNREIYE 286
>UNIPROTKB|C9JCB7 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005739 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 EMBL:AC018878 HOGENOM:HOG000168004
HGNC:HGNC:17729 IPI:IPI00916638 ProteinModelPortal:C9JCB7
SMR:C9JCB7 STRING:C9JCB7 PRIDE:C9JCB7 Ensembl:ENST00000416298
ArrayExpress:C9JCB7 Bgee:C9JCB7 Uniprot:C9JCB7
Length = 134
Score = 101 (40.6 bits), Expect = 0.00011, P = 0.00011
Identities = 30/94 (31%), Positives = 45/94 (47%)
Query: 164 DPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEET--PQAPINP-- 219
+P+K T TL +L R G L+ +ST YG+PE P +E+ PI P
Sbjct: 3 NPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRA 61
Query: 220 -YGKAKKMAEDIILDFSKNSDMAVMILRYFNVIG 252
Y + K++AE + + K + V + R FN G
Sbjct: 62 CYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFG 95
>UNIPROTKB|C9JFU6 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005739 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 EMBL:AC018878 HGNC:HGNC:17729
IPI:IPI00916816 ProteinModelPortal:C9JFU6 SMR:C9JFU6 STRING:C9JFU6
Ensembl:ENST00000444193 ArrayExpress:C9JFU6 Bgee:C9JFU6
Uniprot:C9JFU6
Length = 121
Score = 101 (40.6 bits), Expect = 0.00011, P = 0.00011
Identities = 30/94 (31%), Positives = 45/94 (47%)
Query: 164 DPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEET--PQAPINP-- 219
+P+K T TL +L R G L+ +ST YG+PE P +E+ PI P
Sbjct: 3 NPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRA 61
Query: 220 -YGKAKKMAEDIILDFSKNSDMAVMILRYFNVIG 252
Y + K++AE + + K + V + R FN G
Sbjct: 62 CYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFG 95
>TAIR|locus:2197264 [details] [associations]
symbol:GER1
""GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase 1""
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0006005 "L-fucose biosynthetic process"
evidence=IDA] [GO:0019853 "L-ascorbic acid biosynthetic process"
evidence=IMP] [GO:0050577 "GDP-L-fucose synthase activity"
evidence=IDA] InterPro:IPR001509 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 EMBL:CP002684 GenomeReviews:CT485782_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0016853 EMBL:AC010556 EMBL:AK228837 EMBL:BT029480
EMBL:AF045286 EMBL:AB034806 IPI:IPI00540212 PIR:F96758
RefSeq:NP_177468.2 UniGene:At.1531 ProteinModelPortal:O49213
SMR:O49213 STRING:O49213 PaxDb:O49213 PRIDE:O49213
EnsemblPlants:AT1G73250.1 GeneID:843659 KEGG:ath:AT1G73250
GeneFarm:5162 TAIR:At1g73250 HOGENOM:HOG000168011 InParanoid:O49213
KO:K02377 OMA:DFISAMP ProtClustDB:PLN02725
BioCyc:ARA:AT1G73250-MONOMER BioCyc:MetaCyc:AT1G73250-MONOMER
Genevestigator:O49213 GermOnline:AT1G73250 GO:GO:0050577
GO:GO:0042351 GO:GO:0006005 Uniprot:O49213
Length = 323
Score = 121 (47.7 bits), Expect = 0.00012, P = 0.00012
Identities = 74/305 (24%), Positives = 120/305 (39%)
Query: 105 RGNIGA--VKVLQEL-FPEPGRLQFIYADLGDAKAVNKFFS-ENAFDAVMHFAAVAYVGE 160
RG +G+ V+ LQE F DL V FFS E ++ A V +
Sbjct: 25 RGLVGSAIVRKLQEQGFTNLVLKTHAELDLTRQADVESFFSQEKPVYVILAAAKVGGIHA 84
Query: 161 STLDPLKYYH-NITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETP-QAPIN 218
+ P + N+ T V+ S HGV L++ + Y + PI E A +
Sbjct: 85 NNTYPADFIGVNLQIQTNVI-HSAYEHGVKKLLFLGSSCIYPKFAPQPIPESALLTASLE 143
Query: 219 PYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACF 278
P + +A+ I + A I ++ I P G P H S
Sbjct: 144 PTNEWYAIAK--IAGIK--TCQAYRIQHGWDAISGMPTNLYG----PNDNFHPENSHV-L 194
Query: 279 DAARGIIAGLKVKGTDYSTADGTC--VRDYIDVNDLVDAHVKALERAQPKKVGIYNVGTG 336
A KV G + GT +R+++ V+DL DA V L+R + N+G+G
Sbjct: 195 PALMRRFHEAKVNGAEEVVVWGTGSPLREFLHVDDLADACVFLLDRYSGLEH--VNIGSG 252
Query: 337 KGRSVKEFVEACKKATSANIKVIYEPRRPGDYAEVYSDPTKIRLELNWTAKYTNLQESLE 396
+ +++E E K+ K+ ++ +P D +K+ L WT K +L++ L
Sbjct: 253 QEVTIRELAELVKEVVGFEGKLGWDCTKPDGTPRKLMDSSKLA-SLGWTPK-VSLRDGLS 310
Query: 397 IAWRW 401
+ W
Sbjct: 311 QTYDW 315
>POMBASE|SPAC513.07 [details] [associations]
symbol:SPAC513.07 "flavonol reductase/cinnamoyl-CoA
reductase family" species:4896 "Schizosaccharomyces pombe"
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0033554 "cellular response to stress" evidence=IEP] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 PomBase:SPAC513.07 GO:GO:0005829 GO:GO:0005634
EMBL:CU329670 GO:GO:0033554 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0016491 GO:GO:0044237
OrthoDB:EOG480N5D HOGENOM:HOG000167998 HSSP:Q9UUN9 PIR:T38902
RefSeq:NP_593981.1 ProteinModelPortal:Q9UT59 PRIDE:Q9UT59
EnsemblFungi:SPAC513.07.1 GeneID:2543471 KEGG:spo:SPAC513.07
OMA:YDICTIN NextBio:20804483 Uniprot:Q9UT59
Length = 336
Score = 106 (42.4 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 52/186 (27%), Positives = 83/186 (44%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFP-EPG---RLQFIY 128
VLVTG G+IG+H A +LL+ YRV RG + +++ EL PG +++F+
Sbjct: 6 VLVTGVTGFIGAHVAEQLLQAGYRV-------RGTVRSMEKADELIRLNPGLKDKIEFVI 58
Query: 129 ADLGDAKAVNKFFSE-NAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLES-MARH 186
D A N F + + H A+ +V T + + TL +LE+
Sbjct: 59 VK--DVSASNAFDGVLKDVELICHIASPFFVENVTDNKSQLLDPAVKGTLGILEAAQGVK 116
Query: 187 GVDTLIYSSTCATYG----EP-------EK--MPITEE---TPQAPINPYGKAKKMAEDI 230
+ ++ +S+ A G +P EK PIT E T I Y +KK+AE+
Sbjct: 117 SIKRIVITSSFAAVGNFQIDPHNNKVYTEKDWNPITYEEALTTDNGIVAYCASKKLAEEA 176
Query: 231 ILDFSK 236
++ K
Sbjct: 177 AREYVK 182
Score = 56 (24.8 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 11/19 (57%), Positives = 14/19 (73%)
Query: 306 YIDVNDLVDAHVKALERAQ 324
Y+DV D+ AHV ALE A+
Sbjct: 236 YVDVRDVAAAHVFALENAK 254
>DICTYBASE|DDB_G0278797 [details] [associations]
symbol:DDB_G0278797 species:44689 "Dictyostelium
discoideum" [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
dictyBase:DDB_G0278797 GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AAFI02000024 GO:GO:0044237
RefSeq:XP_641969.1 ProteinModelPortal:Q54XR1
EnsemblProtists:DDB0206198 GeneID:8621701 KEGG:ddi:DDB_G0278797
InParanoid:Q54XR1 OMA:TGFLGCN Uniprot:Q54XR1
Length = 410
Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
Identities = 46/194 (23%), Positives = 91/194 (46%)
Query: 75 VTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA 134
VTG G++G + +LL Y+V + ++ + + + + + +L + D+ +
Sbjct: 36 VTGSTGFLGCNIVEQLLIQGYQVYALYR-NKNKVLELNSIAKRLNKQDQLILVKGDVTNY 94
Query: 135 KAVNKFFSENAFDAVMHFAAV----AYVGESTL--DPLKYYHNITSNTLVVLESMARHGV 188
K++ K + H AA+ A + ++ ++ Y + T V+E+ + GV
Sbjct: 95 KSLLKGIPDECLYC-FHAAALIDLDASESQQSMKEQQIQQYETNVNGTANVVEACFKKGV 153
Query: 189 DTLIYSSTCATYGEPEKMPITEETPQA--PINPYGKAKKMAEDIILDFSKNSDMAVMILR 246
LIY+ST A Y +++ I E+ P+ P + Y + K++ E + D + AV+I
Sbjct: 154 KRLIYTSTIACYDVKDRI-INEQCPKENLPRSGYSRTKRIGELYVEDAIRRGLEAVIISP 212
Query: 247 YFNVIGSDPEGRLG 260
F +IG E +G
Sbjct: 213 GF-IIGKYDENSVG 225
>UNIPROTKB|G4N5T6 [details] [associations]
symbol:MGG_08527 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 EMBL:CM001234 RefSeq:XP_003716031.1
EnsemblFungi:MGG_08527T0 GeneID:2678789 KEGG:mgr:MGG_08527
Uniprot:G4N5T6
Length = 339
Score = 120 (47.3 bits), Expect = 0.00017, P = 0.00017
Identities = 49/180 (27%), Positives = 79/180 (43%)
Query: 73 VLVTGGAGYIGSHAALRLLK-DSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
+L+TG +G IG A RLL D++RV + D + A V + P I ADL
Sbjct: 9 ILITGASGMIGPLLAARLLSTDTHRVVLTD------VVAPTVPPSV-AHPENAVCIQADL 61
Query: 132 GDAKAVNKFFSENA-FDAVMHFAAVAYVGESTLDP---LKYYHNITSNTLVVLESMARHG 187
+ A+ + + A F + G S DP ++ + T L L S R G
Sbjct: 62 TNPAALEALVAASQPLTAAFVFHGIMSAG-SEADPALAMRVNFDATRALLTHLASTNR-G 119
Query: 188 VDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRY 247
+ ++Y+S+ A YG P +T T P YG K + E ++ D ++ + +R+
Sbjct: 120 L-RVVYASSNAVYGTPLPDLVTPATTPTPTGTYGATKYLCEVLVNDMTRRGLVDAYSVRF 178
>UNIPROTKB|I3L2H6 [details] [associations]
symbol:HSD3B7 "3 beta-hydroxysteroid dehydrogenase type 7"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006694 EMBL:AC135048 HGNC:HGNC:18324 GO:GO:0047016
GO:GO:0001558 Ensembl:ENST00000574447 Bgee:I3L2H6 Uniprot:I3L2H6
Length = 176
Score = 112 (44.5 bits), Expect = 0.00017, P = 0.00017
Identities = 48/168 (28%), Positives = 79/168 (47%)
Query: 74 LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD 133
LVTGG G++G H LL+ R+ + + ++G L+EL P R+ I D+
Sbjct: 13 LVTGGCGFLGEHVVRMLLQREPRLGELRVFDQ-HLGPW--LEELKTGPVRVTAIQGDVTQ 69
Query: 134 AKAVNKFFSENAFDAVMHFAAVAYV-GESTLDPLKYYHNIT-SNTLVVLESMARHGVDTL 191
A V + V+H A + V G ++ P K H + T V+E+ + G L
Sbjct: 70 AHEVAAAVA--GAHVVIHTAGLVDVFGRAS--P-KTIHEVNVQGTRNVIEACVQTGTRFL 124
Query: 192 IYSSTCATYGEPEK-MPI---TEETPQAPIN--PYGKAKKMAEDIILD 233
+Y+S+ G K P E+TP ++ PY +K +AE ++L+
Sbjct: 125 VYTSSMEVVGPNTKGHPFYRGNEDTPYEAVHRHPYPCSKALAEWLVLE 172
>ASPGD|ASPL0000026523 [details] [associations]
symbol:AN5409 species:162425 "Emericella nidulans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:BN001305
GO:GO:0044237 EMBL:AACD01000094 RefSeq:XP_663013.1
ProteinModelPortal:Q5B221 EnsemblFungi:CADANIAT00003683
GeneID:2871704 KEGG:ani:AN5409.2 HOGENOM:HOG000088932
OrthoDB:EOG480N5N Uniprot:Q5B221
Length = 415
Score = 121 (47.7 bits), Expect = 0.00019, P = 0.00019
Identities = 61/195 (31%), Positives = 88/195 (45%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQ--ELFPEPGRLQFIYAD 130
VLVTG GYIG+ A + + I L R AV+ LQ E+ P G++ D
Sbjct: 75 VLVTGANGYIGNAVARAFSRAGW---ITYGLVRSE-SAVRSLQLEEILPVLGQID----D 126
Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMA----RH 186
+ A+ + DA++ ST + L Y NT+ +L +++ RH
Sbjct: 127 IDSHSAILHQLPKT-LDAIV----------STTENLDDYITHHKNTIQLLRTLSLASGRH 175
Query: 187 GVDTL-IYSSTCATYG-------EPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNS 238
GV L I SS C YG + + P TEE+P P +P K M+ L+ KNS
Sbjct: 176 GVRPLVIVSSGCKDYGIGPHYHGDRDLKPHTEESPLNPPDPVSKRANMS----LEIFKNS 231
Query: 239 D-MAVMILRYFNVIG 252
D A +++R NV G
Sbjct: 232 DAFAPVLVRPTNVYG 246
>TIGR_CMR|BA_3248 [details] [associations]
symbol:BA_3248 "3-beta hydroxysteroid
dehydrogenase/isomerase family protein" species:198094 "Bacillus
anthracis str. Ames" [GO:0006694 "steroid biosynthetic process"
evidence=ISS] [GO:0030283 "testosterone dehydrogenase [NAD(P)]
activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 HOGENOM:HOG000167989 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0016853 GO:GO:0044237 OMA:ERFGNKS
RefSeq:NP_845549.1 RefSeq:YP_019886.1 RefSeq:YP_029273.1
ProteinModelPortal:Q81NF3 DNASU:1084046
EnsemblBacteria:EBBACT00000013025 EnsemblBacteria:EBBACT00000016605
EnsemblBacteria:EBBACT00000023035 GeneID:1084046 GeneID:2820109
GeneID:2852271 KEGG:ban:BA_3248 KEGG:bar:GBAA_3248 KEGG:bat:BAS3016
ProtClustDB:CLSK918137 BioCyc:BANT260799:GJAJ-3078-MONOMER
BioCyc:BANT261594:GJ7F-3182-MONOMER Uniprot:Q81NF3
Length = 328
Score = 119 (46.9 bits), Expect = 0.00021, P = 0.00021
Identities = 45/162 (27%), Positives = 71/162 (43%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
+LVTGG G++G A RL Y VT IG KVL++ ++F++ L
Sbjct: 3 MLVTGGTGFLGQKLAFRLKNMGYEVTATGR--NKTIG--KVLEQ-----NGIKFVHCPLE 53
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
D + V + + D + H A + D +Y+ T ++E ++G+ LI
Sbjct: 54 DRERVLQVCKDK--DYIFHSGAHSSPWGKYED---FYNANVLGTKHIIEGSQKYGIKRLI 108
Query: 193 YSSTCATYGE-PEKMPITEET--PQAPINPYGKAKKMAEDII 231
+ ST + Y E+ + E P +N Y K MAE I
Sbjct: 109 HVSTPSIYFYYDERQNVVENAKLPDTFVNHYATTKYMAEQAI 150
>UNIPROTKB|Q4KC82 [details] [associations]
symbol:arnA "Bifunctional polymyxin resistance protein
ArnA" species:220664 "Pseudomonas protegens Pf-5" [GO:0009245
"lipid A biosynthetic process" evidence=ISS] [GO:0016742
"hydroxymethyl-, formyl- and related transferase activity"
evidence=ISS] [GO:0016831 "carboxy-lyase activity" evidence=ISS]
[GO:0046398 "UDP-glucuronate metabolic process" evidence=ISS]
[GO:0046677 "response to antibiotic" evidence=ISS]
UniPathway:UPA00032 HAMAP:MF_01166 InterPro:IPR001509
InterPro:IPR002376 InterPro:IPR005793 InterPro:IPR011034
InterPro:IPR021168 Pfam:PF00551 Pfam:PF01370 Pfam:PF02911
PIRSF:PIRSF036506 UniPathway:UPA00030 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
SUPFAM:SSF50486 GO:GO:0016491 GO:GO:0046677 EMBL:CP000076
GenomeReviews:CP000076_GR GO:GO:0009245 GO:GO:0016742 GO:GO:0008168
Gene3D:3.10.25.10 Gene3D:3.40.50.170 SUPFAM:SSF53328 GO:GO:0009103
HOGENOM:HOG000247761 KO:K10011 OMA:VRYCVKY ProtClustDB:PRK08125
RefSeq:YP_260151.1 ProteinModelPortal:Q4KC82 SMR:Q4KC82
STRING:Q4KC82 GeneID:3475938 KEGG:pfl:PFL_3045 PATRIC:19875401
BioCyc:PFLU220664:GIX8-3059-MONOMER GO:GO:0016831 GO:GO:0046398
Uniprot:Q4KC82
Length = 668
Score = 122 (48.0 bits), Expect = 0.00030, P = 0.00030
Identities = 69/287 (24%), Positives = 121/287 (42%)
Query: 71 THVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYA 129
T VL+ G G+IG+H + RLL+D Y V +D IG+ ++ L P F+
Sbjct: 319 TRVLILGVNGFIGNHLSERLLRDDKYDVYGLD------IGS-DAIERLRSHPN-FHFVEG 370
Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD 189
D+ ++ + D V+ A+A E T +PL+ + L ++ ++
Sbjct: 371 DISIHSEWIEYHIKKC-DVVLPLVAIATPIEYTRNPLRVFELDFEENLKLVRYCVKYN-K 428
Query: 190 TLIYSSTCATYGEPEKMPITEETPQ---APINP----YGKAKKMAEDIILDFSKNSDMAV 242
+I+ ST YG + E+T PIN Y +K++ + +I + +
Sbjct: 429 RVIFPSTSEVYGMCQDKNFDEDTSNLIVGPINKQRWIYSVSKQLLDRVIWAYGAKG-LNF 487
Query: 243 MILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADG-T 301
+ R FN +G PR + + RI + A +I L V+GT DG
Sbjct: 488 TLFRPFNWMG----------PRLDRLDSARIGSS--RAITQLILNL-VEGTPIRLFDGGE 534
Query: 302 CVRDYIDVNDLVDAHVKALERAQPKKVG-IYNVGTGKGR-SVKEFVE 346
R + D+ D ++A + ++ G I N+G S+++ E
Sbjct: 535 QKRCFTDIADGIEALARIVDNENDCCNGQIINIGNPDNEASIRQLGE 581
>TIGR_CMR|CPS_2156 [details] [associations]
symbol:CPS_2156 "3-beta hydroxysteroid
dehydrogenase/isomerase family protein" species:167879 "Colwellia
psychrerythraea 34H" [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=ISS] [GO:0006694 "steroid
biosynthetic process" evidence=ISS] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 eggNOG:COG0451 HOGENOM:HOG000167989
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
GO:GO:0016853 EMBL:CP000083 GenomeReviews:CP000083_GR OMA:KAYFLSN
RefSeq:YP_268881.1 ProteinModelPortal:Q482Y6 STRING:Q482Y6
GeneID:3521240 KEGG:cps:CPS_2156 PATRIC:21467431
ProtClustDB:CLSK906403 BioCyc:CPSY167879:GI48-2226-MONOMER
Uniprot:Q482Y6
Length = 400
Score = 119 (46.9 bits), Expect = 0.00030, P = 0.00030
Identities = 48/172 (27%), Positives = 84/172 (48%)
Query: 72 HVLVTGGAGYIGSHAALRLLK-DSYRVTIVDNLSRGNIGAVKVLQELFPEPGRL--QFIY 128
HV VTG G++G+ A RLL+ + +VT +RG+ +PE ++ +
Sbjct: 46 HVFVTGAGGFLGT-AICRLLRLANIKVT---GFARGH----------YPELSQMGVNMVQ 91
Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV 188
D+ D + + + ++ D V H AA A V S D K N + + +A +
Sbjct: 92 GDITDFALLKE--TMHSCDLVFHVAAKAGVWGSKDDYFKPNVQGAKNIIQACQELA---I 146
Query: 189 DTLIYSST-CATYGEPEKMPITEETPQAP--INPYGKAKKMAEDIILDFSKN 237
L+Y+ST T+ ++ I E P A +N YG++K +AE ++L+ S++
Sbjct: 147 TRLVYTSTPSVTFAGVDEAGIDESQPYADNFLNFYGESKALAEQLVLNASQD 198
>UNIPROTKB|P32055 [details] [associations]
symbol:fcl "Fcl" species:83333 "Escherichia coli K-12"
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA] [GO:0009242 "colanic acid biosynthetic
process" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0016853 "isomerase activity" evidence=IEA]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=IEA]
[GO:0050577 "GDP-L-fucose synthase activity" evidence=IEA;IDA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR001509
Pfam:PF01370 UniPathway:UPA00128 UniPathway:UPA00980
InterPro:IPR016040 GO:GO:0005737 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0016853
GO:GO:0009103 HOGENOM:HOG000168011 KO:K02377 GO:GO:0050577
GO:GO:0042351 EMBL:U38473 PIR:C64971 RefSeq:NP_416556.1
RefSeq:YP_490294.1 PDB:1BSV PDB:1BWS PDB:1E6U PDB:1E7Q PDB:1E7R
PDB:1E7S PDB:1FXS PDB:1GFS PDBsum:1BSV PDBsum:1BWS PDBsum:1E6U
PDBsum:1E7Q PDBsum:1E7R PDBsum:1E7S PDBsum:1FXS PDBsum:1GFS
ProteinModelPortal:P32055 SMR:P32055 IntAct:P32055
EnsemblBacteria:EBESCT00000000077 EnsemblBacteria:EBESCT00000014550
GeneID:12930697 GeneID:946563 KEGG:ecj:Y75_p2015 KEGG:eco:b2052
PATRIC:32119437 EchoBASE:EB1736 EcoGene:EG11788 OMA:ASVHVMN
ProtClustDB:CLSK880275 BioCyc:EcoCyc:FCL-MONOMER
BioCyc:ECOL316407:JW2037-MONOMER BioCyc:MetaCyc:FCL-MONOMER
EvolutionaryTrace:P32055 Genevestigator:P32055 GO:GO:0009242
Uniprot:P32055
Length = 321
Score = 117 (46.2 bits), Expect = 0.00033, P = 0.00033
Identities = 67/285 (23%), Positives = 116/285 (40%)
Query: 130 DLGDAKAVNKFFSENAFDAVMHFAA-VAYVGESTLDPLKY-YHN--ITSNTLVVLESMAR 185
+L D++AV+ FF+ D V AA V + + P + Y N I SN ++ + +
Sbjct: 40 NLLDSRAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESN---IIHAAHQ 96
Query: 186 HGVDTLIYSSTCATYGEPEKMPITE-ETPQA---PIN-PYGKAK----KMAEDIILDFSK 236
+ V+ L++ + Y + K P+ E E Q P N PY AK K+ E + +
Sbjct: 97 NDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGR 156
Query: 237 NSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYS 296
+ +VM + + P R H +A ++ G ++
Sbjct: 157 DY-RSVMPTNLYGPHDNFHPSNSHVIPALLRRFH---EATAQNAPDVVVWGSGTPMREFL 212
Query: 297 TADGTCVRDYIDVNDLVDAHVKALERAQPKKVGIYNVGTGKGRSVKEFVEACKKATSANI 356
D I V +L AH LE QP I NVGTG +++E + K
Sbjct: 213 HVDDMAAAS-IHVMEL--AHEVWLENTQPMLSHI-NVGTGVDCTIRELAQTIAKVVGYKG 268
Query: 357 KVIYEPRRPGDYAEVYSDPTKIRLELNWTAKYTNLQESLEIAWRW 401
+V+++ +P D T++ +L W + + L+ L ++W
Sbjct: 269 RVVFDASKPDGTPRKLLDVTRLH-QLGWYHEIS-LEAGLASTYQW 311
>DICTYBASE|DDB_G0286833 [details] [associations]
symbol:DDB_G0286833 "3-beta-hydroxysteroid
dehydrogenase" species:44689 "Dictyostelium discoideum" [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0016616
"oxidoreductase activity, acting on the CH-OH group of donors, NAD
or NADP as acceptor" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0047012 "sterol-4-alpha-carboxylate 3-dehydrogenase
(decarboxylating) activity" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0016126
"sterol biosynthetic process" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0008203 "cholesterol metabolic process" evidence=IEA]
[GO:0008202 "steroid metabolic process" evidence=IEA] [GO:0006695
"cholesterol biosynthetic process" evidence=IEA] [GO:0006629 "lipid
metabolic process" evidence=IEA] UniPathway:UPA00770
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
dictyBase:DDB_G0286833 GO:GO:0016021 GenomeReviews:CM000153_GR
eggNOG:COG0451 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
KO:K00100 GO:GO:0006695 GO:GO:0047012 EMBL:AAFI02000090
RefSeq:XP_637518.1 ProteinModelPortal:Q54L85
EnsemblProtists:DDB0305146 GeneID:8625816 KEGG:ddi:DDB_G0286833
OMA:SIVHAKN Uniprot:Q54L85
Length = 328
Score = 117 (46.2 bits), Expect = 0.00035, P = 0.00035
Identities = 47/189 (24%), Positives = 82/189 (43%)
Query: 72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
+V +TGG+G++G + L+ + Y+V + N KVL ++ P + + L
Sbjct: 3 NVFLTGGSGFLGKYIIEELISNGYKVFALSRSETSN----KVLSQMGATP-----VMSSL 53
Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLV--VLESMARHGVD 189
D + + + D V+H AA ++ L Y NI + L+ + + V
Sbjct: 54 HDEQGLTEAIK--GCDIVIHCAAKLETNSESVQEL-YKDNIDATELLFNICNQSSTSSVS 110
Query: 190 TLIYSSTCATYGEPEKMP-ITEETPQAPINP---YGKAKKMAEDIILDF-SKNSDMAVMI 244
+ S+ E + TE+TP PI Y K+K ++E +L S S M ++
Sbjct: 111 VFCFISSEGVIMNGENINNATEDTPYPPIEQLGWYNKSKAISEQFLLATQSSMSRMKTIV 170
Query: 245 LRYFNVIGS 253
+R V GS
Sbjct: 171 IRLPLVWGS 179
>TAIR|locus:2041974 [details] [associations]
symbol:AXS1 "UDP-D-apiose/UDP-D-xylose synthase 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=NAS]
[GO:0009226 "nucleotide-sugar biosynthetic process" evidence=IDA]
[GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IDA]
[GO:0051287 "NAD binding" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005829 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:3.40.50.720 GO:GO:0051287 EMBL:AC005824 GO:GO:0048040
KO:K12449 ProtClustDB:PLN02427 EMBL:AF361574 EMBL:AY086830
EMBL:BT001016 EMBL:AY442191 EMBL:AY735589 EMBL:AY924751
IPI:IPI00541963 PIR:G84677 RefSeq:NP_180353.1 UniGene:At.23574
ProteinModelPortal:Q9ZUY6 SMR:Q9ZUY6 STRING:Q9ZUY6 PRIDE:Q9ZUY6
EnsemblPlants:AT2G27860.1 GeneID:817332 KEGG:ath:AT2G27860
TAIR:At2g27860 HOGENOM:HOG000261188 InParanoid:Q9ZUY6 OMA:EYKENAQ
PhylomeDB:Q9ZUY6 BioCyc:ARA:AT2G27860-MONOMER
BioCyc:MetaCyc:AT2G27860-MONOMER ArrayExpress:Q9ZUY6
Genevestigator:Q9ZUY6 GO:GO:0009226 Uniprot:Q9ZUY6
Length = 389
Score = 118 (46.6 bits), Expect = 0.00037, P = 0.00037
Identities = 89/384 (23%), Positives = 158/384 (41%)
Query: 73 VLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFPEP----GRLQFI 127
+ + G G+IGSH +LL ++ ++V +D + +K L E P+ GR+QF
Sbjct: 20 ICMIGAGGFIGSHLCEKLLTETPHKVLALDVYN----DKIKHLLE--PDTVEWSGRIQFH 73
Query: 128 YADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG 187
++ + D +++ AA+ + PL ++ + L V++ + +
Sbjct: 74 RINIKHDSRLEGLVK--MADLIINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN 131
Query: 188 VDTLIYSSTCATYGE------PEKMPITEETP----QAPINP------------YGKAKK 225
LI+ STC YG+ P+ P+ ++ + I+P Y AK+
Sbjct: 132 -KRLIHFSTCEVYGKTIGSFLPKDHPLRDDPAFYVLKEDISPCIFGSIEKQRWSYACAKQ 190
Query: 226 MAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHG--RISGACFDAARG 283
+ E ++ + + I+R FN IG P R+ P + G R+ ACF +
Sbjct: 191 LIERLVYAEGAENGLEFTIVRPFNWIG--P--RMDFIPGIDGPSEGVPRVL-ACF--SNN 243
Query: 284 IIAGLKVKGTDYSTADGTCVRDYIDVNDLVDAHVKALERAQPKKVGIYNVGTGKGR-SVK 342
++ +K D G R ++ +ND ++A + +E + I+NVG +V+
Sbjct: 244 LLRREPLKLVD----GGESQRTFVYINDAIEAVLLMIENPERANGHIFNVGNPNNEVTVR 299
Query: 343 EFVEACKK--ATSANIKVIYEPRRPGD----YAEVYSDPTK-------IRLELNWTAKYT 389
+ E + A + I P Y E Y D K I +L W K T
Sbjct: 300 QLAEMMTEVYAKVSGEGAIESPTVDVSSKEFYGEGYDDSDKRIPDMTIINRQLGWNPK-T 358
Query: 390 NLQESLEIAWRWQKSHRGGYASII 413
+L + LE +Q HR YA +
Sbjct: 359 SLWDLLESTLTYQ--HRT-YAEAV 379
>SGD|S000002949 [details] [associations]
symbol:YDR541C "Putative dihydrokaempferol 4-reductase"
species:4932 "Saccharomyces cerevisiae" [GO:0004090 "carbonyl
reductase (NADPH) activity" evidence=ISA] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 SGD:S000002949
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:BK006938 GO:GO:0044237 GeneTree:ENSGT00390000002618
OrthoDB:EOG480N5D GO:GO:0004090 HOGENOM:HOG000167998 EMBL:U43834
RefSeq:NP_010830.4 GeneID:852154 KEGG:sce:YDR541C EMBL:AY692675
PIR:S62020 ProteinModelPortal:Q03049 SMR:Q03049 DIP:DIP-5276N
IntAct:Q03049 MINT:MINT-490812 STRING:Q03049 PRIDE:Q03049
EnsemblFungi:YDR541C CYGD:YDR541c OMA:GEAFTED NextBio:970585
Genevestigator:Q03049 GermOnline:YDR541C Uniprot:Q03049
Length = 344
Score = 117 (46.2 bits), Expect = 0.00038, P = 0.00038
Identities = 69/271 (25%), Positives = 115/271 (42%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
VLV+G +G+I H +LLK Y+V R + K+L++ P I D+
Sbjct: 5 VLVSGASGFIALHILSQLLKQDYKVI---GTVRSHEKEAKLLRQFQHNPNLTLEIVPDIS 61
Query: 133 DAKAVNKFFSENAFDA--VMHFAAVAYVG--ESTLDPLKYYHNITSNTLVVLESMARHGV 188
A +K + + V+H A+ + E D L T N L ++ A V
Sbjct: 62 HPNAFDKVLQKRGREIRYVLHTASPFHYDTTEYEKDLLIPALEGTKNILNSIKKYAADTV 121
Query: 189 DTLIYSSTCATYGEPEKM--P---ITEET-PQAP--------INPYGKAKKMAEDIILDF 234
+ ++ +S+C KM P TEE+ +A IN Y +KK AE +F
Sbjct: 122 ERVVVTSSCTAIITLAKMDDPSVVFTEESWNEATWESCQIDGINAYFASKKFAEKAAWEF 181
Query: 235 SKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELRE---HGRISGACFDAARGIIAGLKVK 291
+K ++ + F + +P G P+L + HG ++ +C +I GL
Sbjct: 182 TKENEDHIK----FKLTTVNPSLLFG----PQLFDEDVHGHLNTSC-----EMINGLIHT 228
Query: 292 GTDYSTADGTCVRDYIDVNDLVDAHVKALER 322
+ S D + +IDV D+ AH+ A ++
Sbjct: 229 PVNASVPDFHSI--FIDVRDVALAHLYAFQK 257
>UNIPROTKB|Q60AF9 [details] [associations]
symbol:MCA0903 "Polysaccharide biosynthesis protein"
species:243233 "Methylococcus capsulatus str. Bath" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR003869 Pfam:PF02719
InterPro:IPR016040 GO:GO:0009058 GO:GO:0000166 Gene3D:3.40.50.720
EMBL:AE017282 GenomeReviews:AE017282_GR HOGENOM:HOG000257078
RefSeq:YP_113388.1 ProteinModelPortal:Q60AF9 GeneID:3103120
KEGG:mca:MCA0903 PATRIC:22605604 OMA:PIFKKQI
ProtClustDB:CLSK2765708 Uniprot:Q60AF9
Length = 615
Score = 120 (47.3 bits), Expect = 0.00044, P = 0.00044
Identities = 47/203 (23%), Positives = 91/203 (44%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKV-LQELFPEPGRLQFIYADL 131
++VTGG G IGS ++ + S +V N+ V++ L++ FP+ + + D+
Sbjct: 286 IMVTGGGGSIGSELCKQIARFSPGRLVVFEHCEFNLYRVELELRQAFPDMA-IHAVLGDV 344
Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
DA +V + + + H AA +V PL V E++ + + T
Sbjct: 345 TDAASVRRAIDVHKPAIIFHAAAYKHV------PLLQQQ--------VREAVFNNVIGTR 390
Query: 192 IYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVI 251
+ YG E + I+ + P N G K+ AE ++ ++ ++ + +R+ NV+
Sbjct: 391 TVAEVAVEYGVGEFVLISTDKAVNPTNVMGATKRAAELVVQSYNGHTATRFITVRFGNVL 450
Query: 252 GSDPEGRLGEAPRPELREHGRIS 274
GS G + R ++R G ++
Sbjct: 451 GS--AGSVVPLFRKQIRNGGPVT 471
>UNIPROTKB|E1C196 [details] [associations]
symbol:SDR42E2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
GeneTree:ENSGT00550000074557 OMA:PLEKHMD EMBL:AADN02023490
IPI:IPI00574185 Ensembl:ENSGALT00000011282 Uniprot:E1C196
Length = 436
Score = 118 (46.6 bits), Expect = 0.00044, P = 0.00044
Identities = 65/263 (24%), Positives = 109/263 (41%)
Query: 74 LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD 133
+VTGG GY G L V + D + + ++ P + I AD+ D
Sbjct: 53 VVTGGGGYFGYKLGCALASSGASVVLYD-----------IHKPIWEIPNGVVCIQADVRD 101
Query: 134 AKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIY 193
AV F + D V H A+ G L + + T ++++ + + LIY
Sbjct: 102 YDAV--FAACEGADCVFHVASYGMSGREQLHREEIETVNINGTRFIIDACKQRNITRLIY 159
Query: 194 SSTC-ATYGEPEKMPIT---EET-PQAPINP----YGKAKKMAEDIILDFSKNSDMAVMI 244
+ST +G +PI EET P PI Y + K +AE ++L + + +A
Sbjct: 160 TSTVNVVFGG---LPIEDGDEETVPYFPIEKHVDHYSRTKSIAEQMVLA-ANGTPLAGGG 215
Query: 245 LRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVR 304
+ Y +V+ P G G PE + H + + RGI++ + D +
Sbjct: 216 VLYTSVLR--PPGIYG----PEEQRH--LPRLAKNIERGILS--------FKFGDPSAKM 259
Query: 305 DYIDVNDLVDAHVKALERAQPKK 327
+++ V +LV A + A E P+K
Sbjct: 260 NWVHVENLVQAQILAAEALTPEK 282
>SGD|S000003007 [details] [associations]
symbol:YGL039W "Oxidoreductase shown to reduce carbonyl
compounds to chiral alcohols" species:4932 "Saccharomyces
cerevisiae" [GO:0042180 "cellular ketone metabolic process"
evidence=IDA] [GO:0006725 "cellular aromatic compound metabolic
process" evidence=IDA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0004090 "carbonyl reductase (NADPH) activity"
evidence=IDA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0016614 "oxidoreductase activity, acting on CH-OH
group of donors" evidence=IDA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
SGD:S000003007 GO:GO:0005737 EMBL:BK006941 eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0006725
GeneTree:ENSGT00390000002618 OrthoDB:EOG480N5D GO:GO:0004090
HOGENOM:HOG000167998 GO:GO:0042180 EMBL:Z72561 EMBL:AY692765
PIR:S64041 RefSeq:NP_011476.1 ProteinModelPortal:P53183 SMR:P53183
DIP:DIP-5378N IntAct:P53183 MINT:MINT-485633 STRING:P53183
PaxDb:P53183 PeptideAtlas:P53183 EnsemblFungi:YGL039W GeneID:852844
KEGG:sce:YGL039W CYGD:YGL039w OMA:HIEAFER NextBio:972425
Genevestigator:P53183 GermOnline:YGL039W Uniprot:P53183
Length = 348
Score = 116 (45.9 bits), Expect = 0.00050, P = 0.00050
Identities = 67/274 (24%), Positives = 112/274 (40%)
Query: 71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYAD 130
T V V+G G+I H LLK Y+V N G +K + P I D
Sbjct: 6 TVVFVSGATGFIALHVVDDLLKTGYKVIGSGRSQEKNDGLLKKFKS---NPNLSMEIVED 62
Query: 131 LGDAKAVNKFFSENAFD--AVMHFAAVAYVGESTL--DPLKYYHNITSNTLVVLESMARH 186
+ A +K F ++ + V+H A+ + + D L N T + L +++ A
Sbjct: 63 IAAPNAFDKVFQKHGKEIKVVLHIASPVHFNTTDFEKDLLIPAVNGTKSILEAIKNYAAD 122
Query: 187 GVDTLIYSSTCATYGEPEKMPITE-------------ETPQA-PINPYGKAKKMAEDIIL 232
V+ ++ +S+ A P M T E+ QA ++ Y +KK AE
Sbjct: 123 TVEKVVITSSVAALASPGDMKDTSFVVNEESWNKDTWESCQANAVSAYCGSKKFAEKTAW 182
Query: 233 DFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGL-KVK 291
DF + + ++ F + +P G P+L +G +++ IIA L K
Sbjct: 183 DFLEENQSSIK----FTLSTINPGFVFG----PQLFADSLRNG--INSSSAIIANLVSYK 232
Query: 292 -GTDYSTADGTCVRDYIDVNDLVDAHVKALERAQ 324
G ++ G +IDV D+ AH+ A E+ +
Sbjct: 233 LGDNFYNYSGP----FIDVRDVSKAHLLAFEKPE 262
>UNIPROTKB|P0A5D1 [details] [associations]
symbol:MT0522 "Uncharacterized protein Rv0501/MT0522"
species:1773 "Mycobacterium tuberculosis" [GO:0005576
"extracellular region" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0005829
GO:GO:0005886 GO:GO:0005576 GO:GO:0003824 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:BX842573
GO:GO:0044237 KO:K01784 KEGG:mtu:Rv3634c PIR:C70546 PIR:H70745
RefSeq:NP_215050.2 RefSeq:NP_334931.1 RefSeq:YP_006513834.1
ProteinModelPortal:P0A5D1 SMR:P0A5D1 PRIDE:P0A5D1
EnsemblBacteria:EBMYCT00000002993 EnsemblBacteria:EBMYCT00000072795
GeneID:13318375 GeneID:887228 GeneID:923918 KEGG:mtc:MT0522
KEGG:mtu:Rv0501 KEGG:mtv:RVBD_0501 PATRIC:18122858
TubercuList:Rv0501 HOGENOM:HOG000053265 OMA:EVEGYVR
ProtClustDB:CLSK881171 Uniprot:P0A5D1
Length = 376
Score = 113 (44.8 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 48/195 (24%), Positives = 80/195 (41%)
Query: 65 QHEEGVTHVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPG 122
+H + VLVTG ++G + RL ++ RV VD A+ +++ G
Sbjct: 18 EHPQYPKVVLVTGACRFLGGYLTARLAQNPLINRVIAVD--------AIAPSKDMLRRMG 69
Query: 123 RLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLES 182
R +F+ AD+ + + K D V+H AA +Y S N+ +
Sbjct: 70 RAEFVRADIRNP-FIAKVIRNGEVDTVVHAAAASYAPRSGGSAALKELNVMGAMQLFAAC 128
Query: 183 MARHGVDTLIYSSTCATYGEPEKMPI--TEETP-QAPINP-YGKAKKMAEDIILDFSKNS 238
V ++ ST YG P+ TE++ + P + + K E + +
Sbjct: 129 QKAPSVRRVVLKSTSEVYGSSPHDPVMFTEDSSSRRPFSQGFPKDSLDIEGYVRALGRRR 188
Query: 239 -DMAVMILRYFNVIG 252
D+AV ILR N+IG
Sbjct: 189 PDIAVTILRLANMIG 203
Score = 44 (20.5 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 368 YAEVYSDPTKIRLELNWTAKYTNLQ 392
Y V D T++R+EL + K+T ++
Sbjct: 307 YGRVM-DTTRMRVELGYQPKWTTVE 330
>SGD|S000002969 [details] [associations]
symbol:ERG26 "C-3 sterol dehydrogenase" species:4932
"Saccharomyces cerevisiae" [GO:0047012 "sterol-4-alpha-carboxylate
3-dehydrogenase (decarboxylating) activity" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA;IDA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA;IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0006696 "ergosterol biosynthetic
process" evidence=IDA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0016126 "sterol biosynthetic process"
evidence=IEA] [GO:0016616 "oxidoreductase activity, acting on the
CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0008202 "steroid metabolic process" evidence=IEA] [GO:0006629
"lipid metabolic process" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000252 "C-3 sterol dehydrogenase (C-4
sterol decarboxylase) activity" evidence=IDA] UniPathway:UPA00770
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 SGD:S000002969
EMBL:BK006941 eggNOG:COG0451 HOGENOM:HOG000167989 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0005789
GeneTree:ENSGT00550000074557 OMA:IQLQPTF GO:GO:0006696 KO:K07748
OrthoDB:EOG4DNJD4 GO:GO:0000252 GO:GO:0047012 EMBL:Z72523
EMBL:AY693026 PIR:S64003 RefSeq:NP_011514.1
ProteinModelPortal:P53199 SMR:P53199 DIP:DIP-6786N IntAct:P53199
MINT:MINT-666123 STRING:P53199 PaxDb:P53199 PeptideAtlas:P53199
EnsemblFungi:YGL001C GeneID:852883 KEGG:sce:YGL001C CYGD:YGL001c
BioCyc:MetaCyc:YGL001C-MONOMER NextBio:972532 Genevestigator:P53199
GermOnline:YGL001C Uniprot:P53199
Length = 349
Score = 113 (44.8 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 41/189 (21%), Positives = 90/189 (47%)
Query: 70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAV--KVLQELFPEPGRLQFI 127
+ VL+ GG+G++G H L++ + + ++ ++ + K+ ++ ++F
Sbjct: 4 IDSVLIIGGSGFLGLH----LIQQFFDINPKPDIHIFDVRDLPEKLSKQFTFNVDDIKFH 59
Query: 128 YADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG 187
DL + +E+ + V+H A+ + G++ P Y T V++ + G
Sbjct: 60 KGDLTSPDDMENAINESKANVVVHCASPMH-GQN---PDIYDIVNVKGTRNVIDMCKKCG 115
Query: 188 VDTLIYSSTCATYGEPEKMPITEET---PQAPINPYGKAKKMAEDIILDFSK-NSDMAVM 243
V+ L+Y+S+ + + +ET P+ P++ Y + K +AED++L + +SD +
Sbjct: 116 VNILVYTSSAGVIFNGQDVHNADETWPIPEVPMDAYNETKAIAEDMVLKANDPSSDFYTV 175
Query: 244 ILRYFNVIG 252
LR + G
Sbjct: 176 ALRPAGIFG 184
Score = 42 (19.8 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 13/50 (26%), Positives = 24/50 (48%)
Query: 282 RGIIAGL----KVKGTDYSTADGTCVRDYIDVNDLVDAHVKALERA-QPK 326
R ++ GL K+ + + D + D+ ++ DAHV A ++ PK
Sbjct: 188 RQLVPGLRQVAKLGQSKFQIGDNNNLFDWTYAGNVADAHVLAAQKLLDPK 237
>MGI|MGI:2141879 [details] [associations]
symbol:Hsd3b7 "hydroxy-delta-5-steroid dehydrogenase, 3
beta- and steroid delta-isomerase 7" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0001558
"regulation of cell growth" evidence=ISO] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0006694 "steroid biosynthetic process" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0016616 "oxidoreductase activity, acting on the
CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0047016 "cholest-5-ene-3-beta,7-alpha-diol
3-beta-dehydrogenase activity" evidence=ISO] [GO:0055114
"oxidation-reduction process" evidence=ISO] InterPro:IPR002225
Pfam:PF01073 UniPathway:UPA00062 InterPro:IPR016040 MGI:MGI:2141879
GO:GO:0016021 eggNOG:COG0451 HOGENOM:HOG000167989
HOVERGEN:HBG000014 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0005789 GO:GO:0006694 GeneTree:ENSGT00550000074557 CTD:80270
KO:K12408 OMA:PCGLRLV OrthoDB:EOG4N5VX7 GO:GO:0047016 GO:GO:0001558
EMBL:AF277718 EMBL:BC132605 EMBL:BC138589 IPI:IPI00111009
RefSeq:NP_598704.2 UniGene:Mm.486340 ProteinModelPortal:Q9EQC1
SMR:Q9EQC1 STRING:Q9EQC1 PhosphoSite:Q9EQC1 PaxDb:Q9EQC1
PRIDE:Q9EQC1 Ensembl:ENSMUST00000046863 GeneID:101502
KEGG:mmu:101502 UCSC:uc009jwu.1 InParanoid:A2RTR5 ChiTaRS:HSD3B7
NextBio:354976 Bgee:Q9EQC1 Genevestigator:Q9EQC1
GermOnline:ENSMUSG00000042289 Uniprot:Q9EQC1
Length = 369
Score = 115 (45.5 bits), Expect = 0.00072, P = 0.00072
Identities = 47/168 (27%), Positives = 79/168 (47%)
Query: 74 LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD 133
LVTGG G++G H LL+ R+ L ++ L+EL P ++ I D+
Sbjct: 13 LVTGGCGFLGEHIVRMLLEREPRLR---ELRVFDLHLSSWLEELKAGPVQVTAIQGDVTQ 69
Query: 134 AKAVNKFFSENAFDAVMHFAAVAYV-GESTLDPLKYYHNIT-SNTLVVLESMARHGVDTL 191
A V S + V+H A + V G+++ P K H + T V+++ + G L
Sbjct: 70 AHEVAAAMSGS--HVVIHTAGLVDVFGKAS--P-KTIHKVNVQGTQNVIDACVQTGTQYL 124
Query: 192 IYSSTCATYGEPEK-MPI---TEETPQAPIN--PYGKAKKMAEDIILD 233
+Y+S+ G K P E+TP ++ PY +K +AE ++L+
Sbjct: 125 VYTSSMEVVGPNIKGHPFYRGNEDTPYEAVHSHPYPCSKALAEQLVLE 172
>UNIPROTKB|I3L900 [details] [associations]
symbol:SDR42E1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006694 "steroid biosynthetic process" evidence=IEA]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
GeneTree:ENSGT00550000074557 OMA:FYNFQPF Ensembl:ENSSSCT00000025649
Uniprot:I3L900
Length = 390
Score = 106 (42.4 bits), Expect = 0.00077, Sum P(3) = 0.00077
Identities = 45/166 (27%), Positives = 68/166 (40%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
VL+TGG GY G L + RV + D S + PE G ++FI D+
Sbjct: 11 VLITGGGGYFGFRLGCALNQKGLRVILFDVSSPAHT---------IPE-G-VKFIRGDIR 59
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
V + F + V H A+ G L+ + T VL++ GV L+
Sbjct: 60 LLADVERAFEDADVTCVFHIASYGMSGREQLNRSRIEDVNVGGTDNVLQACRSRGVPRLV 119
Query: 193 YSSTC-ATYGEPEKMPITEETPQAPIN--P--YGKAKKMAEDIILD 233
Y+ST +G E P P++ P Y + K +AE +L+
Sbjct: 120 YTSTFNVIFGGQVIRNGDESLPYLPLHLHPDHYSRTKSVAEKKVLE 165
Score = 43 (20.2 bits), Expect = 0.00077, Sum P(3) = 0.00077
Identities = 8/23 (34%), Positives = 15/23 (65%)
Query: 305 DYIDVNDLVDAHVKALERAQPKK 327
+++ V++LV AH+ A E + K
Sbjct: 217 EFVHVDNLVQAHILASEALKADK 239
Score = 43 (20.2 bits), Expect = 0.00077, Sum P(3) = 0.00077
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 372 YSDPTKIRLELNWTAKYTNLQESLEIAWRWQKSHRGG 408
Y K + EL + A+ +LQE +E W K+H G
Sbjct: 320 YFSLEKAKKELGYEAQPFDLQEVVE----WFKAHGHG 352
>TIGR_CMR|SO_1745 [details] [associations]
symbol:SO_1745 "3-beta hydroxysteroid
dehydrogenase/isomerase family protein" species:211586 "Shewanella
oneidensis MR-1" [GO:0006694 "steroid biosynthetic process"
evidence=ISS] [GO:0016229 "steroid dehydrogenase activity"
evidence=ISS] InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006694 GO:GO:0016853 EMBL:AE014299 GenomeReviews:AE014299_GR
OMA:PQVTRYR ProtClustDB:CLSK906403 RefSeq:NP_717355.1
ProteinModelPortal:Q8EG63 GeneID:1169523 KEGG:son:SO_1745
PATRIC:23523115 BioCyc:MetaCyc:MONOMER-17300 Uniprot:Q8EG63
Length = 387
Score = 115 (45.5 bits), Expect = 0.00079, P = 0.00079
Identities = 49/182 (26%), Positives = 84/182 (46%)
Query: 70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYA 129
V+H VTG G++G RL+ +VT +RG ++ L G + +
Sbjct: 53 VSHAFVTGAGGFLGKAICQRLIAAGIKVT---GFARGRYLELEAL-------G-VTMVQG 101
Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYY-HNITSNTLVVLESMARHGV 188
DL + + V + + D V H A+ A V D Y+ N+ V+ A +
Sbjct: 102 DLVNPEQVKQ--AMQGCDIVFHVASKAGVWG---DRDSYFCPNVKGAANVIAACKALK-I 155
Query: 189 DTLIYSST-CATYGEPEKMPITEETPQAP--INPYGKAKKMAEDIILDFSKNSDM-AVMI 244
+ L+Y+ST T+ ++ I E TP A +N Y +K +AE ++LD +++S A +
Sbjct: 156 NKLVYTSTPSVTFAGEDESGINESTPYASRFLNYYAHSKAIAEKMMLDANQSSSTNAAYV 215
Query: 245 LR 246
L+
Sbjct: 216 LK 217
>UNIPROTKB|J9NYA9 [details] [associations]
symbol:SDR42E1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006694 GeneTree:ENSGT00550000074557 CTD:93517 OMA:FYNFQPF
EMBL:AAEX03004035 RefSeq:XP_546811.2 ProteinModelPortal:J9NYA9
Ensembl:ENSCAFT00000043975 GeneID:489691 KEGG:cfa:489691
Uniprot:J9NYA9
Length = 393
Score = 115 (45.5 bits), Expect = 0.00081, P = 0.00081
Identities = 66/263 (25%), Positives = 102/263 (38%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
VL+TGG GY G L + + V + D + PE G ++FI D+
Sbjct: 11 VLITGGGGYFGFRLGCALNQKGFHVILFD---------ISSPTHSIPE-G-IEFIRGDIR 59
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
V K F + V H A+ G L+ T +L+ R GV L+
Sbjct: 60 HLSDVEKAFQDADVTCVFHIASYGMSGREQLNRSLIEEVNVGGTDNILQVCRRRGVPRLV 119
Query: 193 YSSTC-ATYGEPEKMPITEETPQAPIN--P--YGKAKKMAEDIILDFSKNSDMAVMILRY 247
Y+ST +G E P P++ P Y + K +AE +L+ S + +LR
Sbjct: 120 YTSTFNVIFGGQVIRNGDESLPYLPLHLHPDHYSRTKSIAEKKVLEASGTT-----LLRS 174
Query: 248 FNVIGS---DPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVR 304
V+ + P G G E R RI RG+ + D +
Sbjct: 175 DGVLRTCALRPAGIYGPG---EQRHLPRIVSYI---ERGLFK--------FVYGDPRSLV 220
Query: 305 DYIDVNDLVDAHVKALERAQPKK 327
+++ V++LV AH+ A E + K
Sbjct: 221 EFVHVDNLVQAHILASEALKADK 243
>RGD|1308481 [details] [associations]
symbol:Sdr42e1 "short chain dehydrogenase/reductase family 42E,
member 1" species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 RGD:1308481 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006694 OrthoDB:EOG40ZQZ0 IPI:IPI00768842
Ensembl:ENSRNOT00000030725 UCSC:RGD:1308481 Uniprot:D3ZZI8
Length = 278
Score = 112 (44.5 bits), Expect = 0.00091, P = 0.00091
Identities = 44/166 (26%), Positives = 69/166 (41%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
VL+TGG GY G L + RV + D ++ Q L PE G + F+ D+
Sbjct: 11 VLITGGGGYFGFRLGCALNQKGVRVILFD--------IIEPAQNL-PE-G-ITFVRGDIR 59
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
V F + V H A+ G L+ + T +L++ GV +L+
Sbjct: 60 CLSDVEAAFQDADIACVFHIASYGMSGREQLNKTRIEEVNVGGTENILQACLGRGVPSLV 119
Query: 193 YSSTC-ATYGEPEKMPITEETPQAPIN--P--YGKAKKMAEDIILD 233
Y+ST +G E P P++ P Y + K +AE +L+
Sbjct: 120 YTSTFNVIFGGQVIRNGDESLPYLPLHLHPDHYSRTKSIAEKKVLE 165
>UNIPROTKB|I3LIF3 [details] [associations]
symbol:HSD3B7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006694 "steroid biosynthetic process" evidence=IEA]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
GeneTree:ENSGT00550000074557 OMA:PCGLRLV EMBL:CU914342
Ensembl:ENSSSCT00000029053 Uniprot:I3LIF3
Length = 363
Score = 114 (45.2 bits), Expect = 0.00091, P = 0.00091
Identities = 44/164 (26%), Positives = 77/164 (46%)
Query: 74 LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD 133
LVTGG G++G H LL+ R+ L ++ L+EL P ++ I D+
Sbjct: 13 LVTGGCGFLGEHVVRMLLQQEPRLC---ELRVFDLHLGPWLEELETGPVQVTAIQGDVTQ 69
Query: 134 AKAVNKFFSENAFDAVMHFAAVAYV-GESTLDPLKYYHNIT-SNTLVVLESMARHGVDTL 191
A V + V+H A + V G ++ + + H + T V+E+ ++G L
Sbjct: 70 AHEVAAAVA--GAHVVIHTAGLVDVFGRASPETI---HEVNVQGTQNVIEACVQNGTRFL 124
Query: 192 IYSSTCATYGEPEKMPITEETPQ--APINPYGKAKKMAEDIILD 233
+Y+S+ G + E TP A +PY ++K +AE ++L+
Sbjct: 125 VYTSSMEVVGPTTRG--NENTPYEAAHRHPYPRSKALAERLVLE 166
>ZFIN|ZDB-GENE-040426-2379 [details] [associations]
symbol:tdh "L-threonine dehydrogenase"
species:7955 "Danio rerio" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 ZFIN:ZDB-GENE-040426-2379
GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 CTD:157739 GeneTree:ENSGT00390000014037
HOGENOM:HOG000034276 HOVERGEN:HBG062086 KO:K15789 OMA:DYAVEIF
OrthoDB:EOG4B2SXX EMBL:BX510941 EMBL:BC063962 IPI:IPI00488483
RefSeq:NP_998410.1 UniGene:Dr.10250 STRING:Q6P3J8
Ensembl:ENSDART00000025509 Ensembl:ENSDART00000147105 GeneID:406528
KEGG:dre:406528 InParanoid:Q6P3J8 NextBio:20818098 Uniprot:Q6P3J8
Length = 375
Score = 114 (45.2 bits), Expect = 0.00096, P = 0.00096
Identities = 50/190 (26%), Positives = 86/190 (45%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRL----QFIY 128
VL+TGG G +G A +LL+ + + N+ +L ++ P + FIY
Sbjct: 60 VLITGGLGQLGVGLA-KLLRKRF--------GKNNV----ILSDIRKPPSNVFHSGPFIY 106
Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAV-AYVGESTLDPLKYYHNITSNTLVVLESMARHG 187
+D+ D K + + N ++H++A+ + VGE+ + L NIT +L+ A HG
Sbjct: 107 SDILDYKNLREIVVNNRITWLVHYSALLSAVGEANV-ALARAVNITG-LHNILDIAAEHG 164
Query: 188 VDTLIYSSTCATYGEPE-KMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILR 246
+ L ST +G + P + Q P YG +K AE + + + LR
Sbjct: 165 L-RLFVPSTIGAFGPTSPRNPTPDLCVQRPRTIYGVSKVHAELMGEYYHHRYGLDFRCLR 223
Query: 247 YFNVIGSDPE 256
Y +I +D +
Sbjct: 224 YPGIISADSQ 233
>UNIPROTKB|Q74FC2 [details] [associations]
symbol:hpnA "NAD-dependent nucleoside diphosphate-sugar
epimerase/dehydratase" species:243231 "Geobacter sulfurreducens
PCA" [GO:0006694 "steroid biosynthetic process" evidence=ISS]
[GO:0045552 "dihydrokaempferol 4-reductase activity" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006694 GO:GO:0050662 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0044237 GO:GO:0045552
HOGENOM:HOG000168005 KO:K00091 RefSeq:NP_951744.1
ProteinModelPortal:Q74FC2 GeneID:2685417 KEGG:gsu:GSU0687
PATRIC:22024129 OMA:FESSKAT ProtClustDB:CLSK827993
BioCyc:GSUL243231:GH27-722-MONOMER InterPro:IPR017829
TIGRFAMs:TIGR03466 Uniprot:Q74FC2
Length = 328
Score = 113 (44.8 bits), Expect = 0.00097, P = 0.00097
Identities = 47/162 (29%), Positives = 68/162 (41%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSYRVTIV--DNLSRGNIGAVKVLQELFPEPGRLQFIYAD 130
V VTG G+IG+ LLKD V ++ R N+ + V + D
Sbjct: 3 VFVTGATGFIGASIVRELLKDGCHVRVLARPGSDRRNLAGLDV-----------EICEGD 51
Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT 190
L D +A+ A V++ AA Y T P Y T +LE+ R G+
Sbjct: 52 LRDRQALEHGL---AGCEVLYHAAADY-RLWTRTPAAMYAANVDGTRNILEAALRRGIAR 107
Query: 191 LIYSSTCATYGEPEK-MPITEETPQA---PINPYGKAKKMAE 228
++Y+S+ T G P P TE TP + Y K+K +AE
Sbjct: 108 VVYTSSVGTLGNPGNGTPGTETTPVTFADMVGHYKKSKFLAE 149
>TIGR_CMR|GSU_0687 [details] [associations]
symbol:GSU_0687 "dihydroflavonol 4-reductase, putative"
species:243231 "Geobacter sulfurreducens PCA" [GO:0006694 "steroid
biosynthetic process" evidence=ISS] [GO:0045552 "dihydrokaempferol
4-reductase activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
GO:GO:0050662 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0044237
GO:GO:0045552 HOGENOM:HOG000168005 KO:K00091 RefSeq:NP_951744.1
ProteinModelPortal:Q74FC2 GeneID:2685417 KEGG:gsu:GSU0687
PATRIC:22024129 OMA:FESSKAT ProtClustDB:CLSK827993
BioCyc:GSUL243231:GH27-722-MONOMER InterPro:IPR017829
TIGRFAMs:TIGR03466 Uniprot:Q74FC2
Length = 328
Score = 113 (44.8 bits), Expect = 0.00097, P = 0.00097
Identities = 47/162 (29%), Positives = 68/162 (41%)
Query: 73 VLVTGGAGYIGSHAALRLLKDSYRVTIV--DNLSRGNIGAVKVLQELFPEPGRLQFIYAD 130
V VTG G+IG+ LLKD V ++ R N+ + V + D
Sbjct: 3 VFVTGATGFIGASIVRELLKDGCHVRVLARPGSDRRNLAGLDV-----------EICEGD 51
Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT 190
L D +A+ A V++ AA Y T P Y T +LE+ R G+
Sbjct: 52 LRDRQALEHGL---AGCEVLYHAAADY-RLWTRTPAAMYAANVDGTRNILEAALRRGIAR 107
Query: 191 LIYSSTCATYGEPEK-MPITEETPQA---PINPYGKAKKMAE 228
++Y+S+ T G P P TE TP + Y K+K +AE
Sbjct: 108 VVYTSSVGTLGNPGNGTPGTETTPVTFADMVGHYKKSKFLAE 149
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.136 0.400 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 413 392 0.00095 117 3 11 22 0.40 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 217
No. of states in DFA: 609 (65 KB)
Total size of DFA: 243 KB (2132 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 31.86u 0.12s 31.98t Elapsed: 00:00:02
Total cpu time: 31.90u 0.13s 32.03t Elapsed: 00:00:02
Start: Tue May 21 04:39:52 2013 End: Tue May 21 04:39:54 2013
WARNINGS ISSUED: 1