Query 015082
Match_columns 413
No_of_seqs 170 out of 1722
Neff 8.1
Searched_HMMs 46136
Date Fri Mar 29 02:55:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015082.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015082hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02192 3-ketoacyl-CoA syntha 100.0 2.3E-69 5E-74 545.8 33.6 411 3-413 101-511 (511)
2 PLN02932 3-ketoacyl-CoA syntha 100.0 1.8E-67 3.9E-72 530.5 36.9 404 3-407 67-476 (478)
3 PLN02854 3-ketoacyl-CoA syntha 100.0 7.8E-66 1.7E-70 521.2 37.3 407 3-409 113-520 (521)
4 PLN02377 3-ketoacyl-CoA syntha 100.0 4.1E-65 8.8E-70 516.2 36.1 404 3-407 97-500 (502)
5 PLN00415 3-ketoacyl-CoA syntha 100.0 3E-61 6.6E-66 479.6 38.4 405 3-407 59-465 (466)
6 COG0332 FabH 3-oxoacyl-[acyl-c 100.0 1.3E-59 2.9E-64 451.1 21.0 312 1-384 1-323 (323)
7 PLN03172 chalcone synthase fam 100.0 1E-51 2.2E-56 412.4 31.5 347 3-384 16-387 (393)
8 PLN03168 chalcone synthase; Pr 100.0 2.6E-51 5.7E-56 409.6 32.0 347 3-385 15-387 (389)
9 PLN03169 chalcone synthase fam 100.0 5.9E-51 1.3E-55 407.9 32.7 348 3-384 21-389 (391)
10 PLN03173 chalcone synthase; Pr 100.0 1.4E-50 3E-55 404.0 32.8 348 3-385 16-388 (391)
11 cd00831 CHS_like Chalcone and 100.0 1.2E-50 2.7E-55 403.4 31.6 344 4-381 2-361 (361)
12 PLN03170 chalcone synthase; Pr 100.0 1.3E-50 2.9E-55 405.7 31.1 352 3-388 20-395 (401)
13 PLN03171 chalcone synthase-lik 100.0 1.7E-49 3.7E-54 398.0 34.1 345 4-385 23-396 (399)
14 PRK05963 3-oxoacyl-(acyl carri 100.0 2.1E-50 4.5E-55 396.5 25.0 323 3-383 3-326 (326)
15 PRK12880 3-oxoacyl-(acyl carri 100.0 1.2E-49 2.7E-54 393.7 24.3 330 3-385 7-340 (353)
16 COG3424 BcsA Predicted naringe 100.0 5.9E-49 1.3E-53 362.4 26.5 346 4-385 2-354 (356)
17 PRK07204 3-oxoacyl-(acyl carri 100.0 2.9E-48 6.2E-53 381.8 27.0 324 3-383 4-329 (329)
18 CHL00203 fabH 3-oxoacyl-acyl-c 100.0 8.7E-49 1.9E-53 384.9 22.9 324 3-384 2-326 (326)
19 PLN02326 3-oxoacyl-[acyl-carri 100.0 1.4E-48 3.1E-53 390.4 24.5 328 3-383 47-379 (379)
20 PRK12879 3-oxoacyl-(acyl carri 100.0 6.8E-48 1.5E-52 378.4 26.2 321 3-384 4-325 (325)
21 PRK09258 3-oxoacyl-(acyl carri 100.0 6.6E-47 1.4E-51 373.5 27.0 318 3-383 5-338 (338)
22 PRK06840 hypothetical protein; 100.0 1.1E-46 2.4E-51 372.0 25.5 327 3-385 4-337 (339)
23 TIGR00747 fabH 3-oxoacyl-(acyl 100.0 1.9E-46 4.1E-51 367.1 25.0 315 4-383 3-318 (318)
24 cd00830 KAS_III Ketoacyl-acyl 100.0 4.5E-46 9.7E-51 364.5 27.4 318 4-381 2-320 (320)
25 PRK09352 3-oxoacyl-(acyl carri 100.0 3.8E-45 8.3E-50 358.0 26.6 318 1-384 1-319 (319)
26 PRK04262 hypothetical protein; 100.0 1.5E-44 3.2E-49 357.7 24.4 308 3-385 2-310 (347)
27 PRK06816 3-oxoacyl-(acyl carri 100.0 5.5E-44 1.2E-48 357.2 26.0 346 3-384 2-378 (378)
28 TIGR00748 HMG_CoA_syn_Arc hydr 100.0 2.6E-44 5.6E-49 355.2 22.1 313 4-397 2-318 (345)
29 PRK07515 3-oxoacyl-(acyl carri 100.0 1.2E-42 2.6E-47 347.3 26.8 346 3-383 2-371 (372)
30 cd00827 init_cond_enzymes "ini 100.0 5E-41 1.1E-45 329.4 24.3 320 4-381 2-324 (324)
31 PF08392 FAE1_CUT1_RppA: FAE1/ 100.0 3.6E-40 7.7E-45 308.8 27.3 281 3-283 8-288 (290)
32 TIGR01835 HMG-CoA-S_prok 3-hyd 100.0 7.7E-39 1.7E-43 319.8 23.4 307 4-385 1-319 (379)
33 PLN02577 hydroxymethylglutaryl 100.0 1.5E-35 3.2E-40 298.5 22.9 308 3-385 4-372 (459)
34 COG3425 PksG 3-hydroxy-3-methy 100.0 9.6E-35 2.1E-39 280.0 19.2 315 3-390 2-317 (377)
35 TIGR01833 HMG-CoA-S_euk 3-hydr 100.0 5.9E-33 1.3E-37 279.3 20.0 317 3-386 1-376 (454)
36 PF00195 Chal_sti_synt_N: Chal 100.0 4E-33 8.7E-38 255.0 14.1 198 3-202 14-226 (226)
37 cd00327 cond_enzymes Condensin 100.0 3.4E-28 7.3E-33 230.0 13.4 235 78-381 7-254 (254)
38 cd00825 decarbox_cond_enzymes 99.9 5.4E-26 1.2E-30 223.4 11.2 252 78-381 11-332 (332)
39 PF08541 ACP_syn_III_C: 3-Oxoa 99.8 5.2E-21 1.1E-25 152.3 5.6 84 297-383 7-90 (90)
40 PF01154 HMG_CoA_synt_N: Hydro 99.8 8E-20 1.7E-24 159.5 10.2 165 3-202 4-173 (174)
41 PRK06147 3-oxoacyl-(acyl carri 99.8 1.2E-18 2.7E-23 172.3 15.5 314 1-385 2-344 (348)
42 TIGR02845 spore_V_AD stage V s 99.8 1.8E-17 3.9E-22 158.0 19.1 116 78-203 50-173 (327)
43 KOG1393 Hydroxymethylglutaryl- 99.7 5.5E-17 1.2E-21 154.3 14.2 322 3-388 11-381 (462)
44 PF02797 Chal_sti_synt_C: Chal 99.7 2.5E-17 5.5E-22 142.7 11.0 118 239-384 25-150 (151)
45 PRK08304 stage V sporulation p 99.7 2.8E-15 6.1E-20 143.4 18.1 117 78-203 56-179 (337)
46 cd00834 KAS_I_II Beta-ketoacyl 99.6 4.1E-14 8.9E-19 143.1 20.0 187 3-203 2-243 (406)
47 cd00751 thiolase Thiolase are 99.6 1.5E-14 3.3E-19 145.3 15.8 94 78-172 22-116 (386)
48 PRK09051 beta-ketothiolase; Pr 99.6 6.8E-14 1.5E-18 140.6 18.4 94 78-172 27-122 (394)
49 PRK05656 acetyl-CoA acetyltran 99.6 6.5E-14 1.4E-18 140.9 17.2 94 78-172 26-120 (393)
50 smart00825 PKS_KS Beta-ketoacy 99.6 1.1E-13 2.5E-18 140.7 18.8 122 77-203 86-247 (424)
51 PRK06064 acetyl-CoA acetyltran 99.5 6.8E-13 1.5E-17 133.6 18.6 93 78-172 22-117 (389)
52 PF08545 ACP_syn_III: 3-Oxoacy 99.5 2.7E-14 6E-19 110.9 6.2 66 133-203 1-66 (80)
53 cd00829 SCP-x_thiolase Thiolas 99.5 1.5E-12 3.3E-17 130.4 19.3 93 78-172 16-109 (375)
54 cd00828 elong_cond_enzymes "el 99.5 1.1E-12 2.4E-17 132.8 18.0 123 77-203 71-243 (407)
55 PRK08313 acetyl-CoA acetyltran 99.5 1.5E-12 3.2E-17 130.8 18.1 92 78-171 24-117 (386)
56 PRK05790 putative acyltransfer 99.5 2.1E-12 4.5E-17 130.3 17.8 93 78-171 26-119 (393)
57 TIGR03150 fabF beta-ketoacyl-a 99.5 3.2E-12 7E-17 129.4 18.8 188 3-203 2-243 (407)
58 PRK07661 acetyl-CoA acetyltran 99.4 3.5E-12 7.7E-17 128.1 17.3 94 78-172 27-122 (391)
59 cd00833 PKS polyketide synthas 99.4 1.2E-11 2.5E-16 125.7 20.7 122 77-203 86-247 (421)
60 PRK06445 acetyl-CoA acetyltran 99.4 5.5E-12 1.2E-16 127.0 17.4 94 78-172 32-127 (394)
61 PRK12404 stage V sporulation p 99.4 1.4E-11 3E-16 117.5 18.3 119 76-203 52-177 (334)
62 PRK06501 3-oxoacyl-(acyl carri 99.4 1.7E-11 3.7E-16 124.7 20.3 182 3-203 12-257 (425)
63 PRK07314 3-oxoacyl-(acyl carri 99.4 1.2E-11 2.6E-16 125.4 19.1 189 1-203 1-244 (411)
64 PRK06690 acetyl-CoA acetyltran 99.3 1.2E-11 2.7E-16 122.6 14.2 90 78-172 25-114 (361)
65 PRK07108 acetyl-CoA acetyltran 99.3 8.4E-12 1.8E-16 125.5 10.9 94 78-172 27-122 (392)
66 TIGR01930 AcCoA-C-Actrans acet 99.3 7.8E-12 1.7E-16 125.7 10.1 94 78-172 21-115 (386)
67 PRK06333 3-oxoacyl-(acyl carri 99.3 9.1E-11 2E-15 119.5 18.0 121 78-203 82-256 (424)
68 PRK07103 polyketide beta-ketoa 99.3 9.6E-11 2.1E-15 118.8 18.0 121 78-203 80-251 (410)
69 PRK06205 acetyl-CoA acetyltran 99.3 1.1E-11 2.5E-16 125.1 10.4 94 78-172 26-120 (404)
70 PRK08235 acetyl-CoA acetyltran 99.3 1.5E-11 3.3E-16 123.7 10.8 94 78-172 26-120 (393)
71 PRK08439 3-oxoacyl-(acyl carri 99.3 3E-10 6.6E-15 115.0 20.2 190 1-203 1-244 (406)
72 PRK08242 acetyl-CoA acetyltran 99.3 2E-11 4.4E-16 122.7 11.4 94 78-172 28-123 (402)
73 PF00108 Thiolase_N: Thiolase, 99.2 2.9E-11 6.2E-16 115.3 10.1 94 78-172 26-120 (264)
74 PRK09052 acetyl-CoA acetyltran 99.2 4.5E-11 9.7E-16 120.4 11.0 94 78-172 31-127 (399)
75 PRK12578 acetyl-CoA acetyltran 99.2 5.3E-11 1.1E-15 119.7 11.3 93 78-172 21-114 (385)
76 PRK09116 3-oxoacyl-(acyl carri 99.2 9.9E-10 2.1E-14 111.1 20.1 191 1-203 1-245 (405)
77 PRK08722 3-oxoacyl-(acyl carri 99.2 1.7E-09 3.7E-14 109.7 21.4 188 3-203 5-246 (414)
78 PRK08170 acetyl-CoA acetyltran 99.2 6.3E-11 1.4E-15 120.5 10.9 94 78-172 27-121 (426)
79 PRK05952 3-oxoacyl-(acyl carri 99.2 1.3E-09 2.7E-14 109.3 19.6 298 1-382 1-380 (381)
80 PRK06954 acetyl-CoA acetyltran 99.2 8.8E-11 1.9E-15 118.4 10.5 94 78-172 31-125 (397)
81 PRK06059 lipid-transfer protei 99.2 1E-10 2.2E-15 118.2 10.3 93 78-172 23-117 (399)
82 PLN02787 3-oxoacyl-[acyl-carri 99.2 3.8E-09 8.2E-14 109.9 21.4 187 3-203 130-373 (540)
83 cd00826 nondecarbox_cond_enzym 99.2 1.6E-10 3.5E-15 116.3 10.8 93 78-172 23-117 (393)
84 PRK09185 3-oxoacyl-(acyl carri 99.1 7.3E-09 1.6E-13 104.5 22.2 207 115-383 138-390 (392)
85 cd00832 CLF Chain-length facto 99.1 2.9E-09 6.3E-14 107.6 19.3 187 3-203 2-241 (399)
86 PRK06065 acetyl-CoA acetyltran 99.1 2.1E-10 4.5E-15 115.3 10.4 91 78-170 29-121 (392)
87 PRK07967 3-oxoacyl-(acyl carri 99.1 7.7E-09 1.7E-13 104.6 21.4 189 1-203 1-244 (406)
88 PLN02836 3-oxoacyl-[acyl-carri 99.1 5.3E-09 1.1E-13 106.9 19.7 121 78-203 93-267 (437)
89 PTZ00050 3-oxoacyl-acyl carrie 99.1 2.4E-09 5.1E-14 109.0 16.5 121 78-203 77-251 (421)
90 PRK07910 3-oxoacyl-(acyl carri 99.1 8.4E-09 1.8E-13 104.8 20.4 186 2-203 12-254 (418)
91 PLN02287 3-ketoacyl-CoA thiola 99.1 5E-10 1.1E-14 114.2 11.3 95 77-172 70-166 (452)
92 PRK13359 beta-ketoadipyl CoA t 99.1 6.2E-10 1.3E-14 112.1 11.2 94 78-172 26-122 (400)
93 PRK08963 fadI 3-ketoacyl-CoA t 99.1 4.5E-10 9.7E-15 114.3 10.1 94 78-172 29-123 (428)
94 PRK07850 acetyl-CoA acetyltran 99.1 6.9E-10 1.5E-14 111.5 11.1 94 78-172 26-121 (387)
95 PRK08131 acetyl-CoA acetyltran 99.1 7.2E-10 1.6E-14 111.7 11.1 94 78-172 26-121 (401)
96 PRK06633 acetyl-CoA acetyltran 99.1 4.5E-10 9.7E-15 112.7 9.0 94 78-172 27-121 (392)
97 PRK09050 beta-ketoadipyl CoA t 99.0 1E-09 2.2E-14 110.7 10.7 94 78-172 26-122 (401)
98 PRK07851 acetyl-CoA acetyltran 99.0 1.3E-09 2.7E-14 110.3 11.2 93 78-172 27-122 (406)
99 PRK06366 acetyl-CoA acetyltran 99.0 1.3E-09 2.9E-14 109.5 11.0 94 78-172 26-120 (388)
100 TIGR02446 FadI fatty oxidation 99.0 9.4E-10 2E-14 111.8 9.8 94 78-172 31-125 (430)
101 TIGR02430 pcaF beta-ketoadipyl 99.0 1.8E-09 4E-14 108.7 10.6 94 78-172 25-121 (400)
102 PLN02644 acetyl-CoA C-acetyltr 99.0 2.4E-09 5.2E-14 108.0 11.4 94 78-172 25-119 (394)
103 PRK07516 acetyl-CoA acetyltran 99.0 1.6E-09 3.5E-14 109.1 9.9 93 78-172 22-117 (389)
104 PRK06504 acetyl-CoA acetyltran 99.0 2.5E-09 5.4E-14 107.4 11.1 94 78-172 26-121 (390)
105 PTZ00455 3-ketoacyl-CoA thiola 99.0 3.6E-09 7.8E-14 107.7 11.5 94 78-172 48-152 (438)
106 PRK06157 acetyl-CoA acetyltran 99.0 3.9E-09 8.5E-14 106.5 11.1 93 78-172 27-120 (398)
107 PRK06025 acetyl-CoA acetyltran 99.0 4.5E-09 9.7E-14 105.6 11.3 94 78-172 29-124 (417)
108 PRK06289 acetyl-CoA acetyltran 98.9 3.1E-09 6.7E-14 107.5 10.2 91 78-172 26-122 (403)
109 PRK06158 thiolase; Provisional 98.9 2.1E-09 4.5E-14 108.0 8.7 87 78-169 28-115 (384)
110 PRK08947 fadA 3-ketoacyl-CoA t 98.9 3.3E-09 7.2E-14 106.6 10.1 94 78-172 27-123 (387)
111 PRK14691 3-oxoacyl-(acyl carri 98.9 3.8E-08 8.3E-13 97.2 15.7 120 78-203 4-174 (342)
112 PRK06519 3-oxoacyl-(acyl carri 98.9 9.5E-08 2.1E-12 96.3 18.4 220 78-361 73-361 (398)
113 TIGR02445 fadA fatty oxidation 98.9 5.2E-09 1.1E-13 105.1 9.0 94 78-172 25-121 (385)
114 PRK06365 acetyl-CoA acetyltran 98.9 8.4E-09 1.8E-13 105.0 10.6 93 78-172 37-131 (430)
115 PRK09268 acetyl-CoA acetyltran 98.9 1.2E-08 2.6E-13 103.7 11.0 94 78-172 31-125 (427)
116 PF00109 ketoacyl-synt: Beta-k 98.8 3.6E-08 7.8E-13 93.2 13.0 120 77-201 86-251 (254)
117 PRK08256 lipid-transfer protei 98.8 1.1E-08 2.4E-13 103.2 9.9 90 78-172 22-112 (391)
118 PRK07801 acetyl-CoA acetyltran 98.8 1.8E-08 4E-13 101.2 10.3 94 78-172 26-121 (382)
119 TIGR02813 omega_3_PfaA polyket 98.7 1.5E-06 3.3E-11 104.1 22.3 216 116-384 185-462 (2582)
120 PRK08257 acetyl-CoA acetyltran 98.6 3.4E-07 7.3E-12 94.9 11.5 93 78-172 27-121 (498)
121 PRK08142 acetyl-CoA acetyltran 98.6 2.5E-07 5.4E-12 93.0 9.6 89 78-171 25-113 (388)
122 COG0304 FabB 3-oxoacyl-(acyl-c 98.5 5.2E-06 1.1E-10 83.6 17.6 126 74-204 67-245 (412)
123 COG3321 Polyketide synthase mo 98.4 1.9E-05 4.1E-10 88.7 21.6 291 4-352 6-360 (1061)
124 KOG1390 Acetyl-CoA acetyltrans 98.4 4.5E-07 9.8E-12 85.6 7.1 94 78-172 30-124 (396)
125 PRK07855 lipid-transfer protei 98.4 1E-06 2.2E-11 88.6 10.3 85 78-167 24-108 (386)
126 PF07451 SpoVAD: Stage V sporu 98.4 2.3E-06 5E-11 80.9 11.0 121 75-204 48-175 (329)
127 COG0183 PaaJ Acetyl-CoA acetyl 98.4 1.5E-06 3.2E-11 87.5 9.6 94 78-172 27-124 (392)
128 PRK06066 acetyl-CoA acetyltran 98.3 4.8E-06 1E-10 83.6 11.2 89 78-171 25-116 (385)
129 PRK07937 lipid-transfer protei 98.1 2E-05 4.3E-10 78.3 10.2 88 79-171 25-114 (352)
130 KOG1406 Peroxisomal 3-ketoacyl 98.0 8.9E-06 1.9E-10 75.1 5.0 89 79-172 30-119 (408)
131 KOG1391 Acetyl-CoA acetyltrans 98.0 1.4E-05 3E-10 73.6 5.9 94 78-172 28-123 (396)
132 KOG1392 Acetyl-CoA acetyltrans 97.6 4.3E-05 9.3E-10 71.4 3.6 94 78-172 66-160 (465)
133 KOG1389 3-oxoacyl CoA thiolase 97.4 0.0003 6.4E-09 66.7 6.0 94 78-174 61-157 (435)
134 PRK06025 acetyl-CoA acetyltran 97.3 0.00019 4.2E-09 72.5 4.3 73 297-371 331-406 (417)
135 KOG1394 3-oxoacyl-(acyl-carrie 97.3 0.00098 2.1E-08 64.4 7.9 123 76-203 92-269 (440)
136 PF08540 HMG_CoA_synt_C: Hydro 96.4 0.0014 3.1E-08 62.7 1.5 62 327-388 143-206 (282)
137 PF08541 ACP_syn_III_C: 3-Oxoa 95.5 0.015 3.2E-07 45.7 3.4 75 90-168 1-78 (90)
138 PF13723 Ketoacyl-synt_2: Beta 95.3 0.32 6.9E-06 44.9 12.0 113 78-203 34-172 (218)
139 PRK06816 3-oxoacyl-(acyl carri 94.1 0.33 7.1E-06 48.8 9.8 87 76-169 268-365 (378)
140 TIGR00748 HMG_CoA_syn_Arc hydr 94.0 0.19 4.2E-06 49.8 7.9 83 78-166 206-293 (345)
141 PLN02644 acetyl-CoA C-acetyltr 93.9 0.11 2.3E-06 52.6 6.0 86 297-383 307-392 (394)
142 PRK07204 3-oxoacyl-(acyl carri 93.6 0.28 6.1E-06 48.1 8.1 85 76-167 226-316 (329)
143 PRK09258 3-oxoacyl-(acyl carri 93.5 0.24 5.3E-06 48.7 7.6 89 74-169 233-327 (338)
144 CHL00203 fabH 3-oxoacyl-acyl-c 93.3 0.23 5.1E-06 48.7 7.1 82 79-167 225-312 (326)
145 TIGR00747 fabH 3-oxoacyl-(acyl 93.1 0.25 5.4E-06 48.2 6.8 84 77-167 216-305 (318)
146 PRK05963 3-oxoacyl-(acyl carri 92.9 0.24 5.2E-06 48.5 6.5 86 76-168 223-314 (326)
147 PRK09052 acetyl-CoA acetyltran 92.6 0.2 4.3E-06 50.8 5.5 58 297-355 313-370 (399)
148 PRK12879 3-oxoacyl-(acyl carri 92.6 0.46 1E-05 46.4 8.0 83 78-167 223-311 (325)
149 KOG1389 3-oxoacyl CoA thiolase 92.5 0.12 2.6E-06 49.4 3.5 90 297-389 336-429 (435)
150 PRK07801 acetyl-CoA acetyltran 92.2 0.21 4.6E-06 50.2 5.2 85 297-382 296-380 (382)
151 PRK08242 acetyl-CoA acetyltran 92.2 0.24 5.3E-06 50.1 5.6 59 296-355 315-373 (402)
152 PLN02326 3-oxoacyl-[acyl-carri 92.1 0.71 1.5E-05 46.4 8.8 84 77-167 277-366 (379)
153 cd00830 KAS_III Ketoacyl-acyl 92.0 0.49 1.1E-05 46.0 7.4 85 76-167 219-309 (320)
154 PRK07108 acetyl-CoA acetyltran 91.9 0.18 4E-06 50.9 4.3 58 297-355 306-363 (392)
155 KOG1202 Animal-type fatty acid 91.8 1.9 4.2E-05 48.5 11.8 126 78-204 87-248 (2376)
156 TIGR01930 AcCoA-C-Actrans acet 91.8 0.25 5.5E-06 49.8 5.1 84 297-381 302-385 (386)
157 PRK06504 acetyl-CoA acetyltran 91.6 0.43 9.3E-06 48.2 6.5 59 297-356 304-365 (390)
158 PRK08235 acetyl-CoA acetyltran 91.5 0.26 5.5E-06 49.9 4.9 85 297-383 307-392 (393)
159 PRK04262 hypothetical protein; 91.5 0.41 8.8E-06 47.5 6.3 81 80-166 209-294 (347)
160 PRK13359 beta-ketoadipyl CoA t 91.4 0.23 5E-06 50.3 4.4 81 297-382 312-398 (400)
161 PRK07850 acetyl-CoA acetyltran 91.4 0.38 8.3E-06 48.5 6.0 84 297-382 301-385 (387)
162 PRK06954 acetyl-CoA acetyltran 91.4 0.32 6.9E-06 49.3 5.4 84 297-382 311-395 (397)
163 TIGR02430 pcaF beta-ketoadipyl 91.3 0.22 4.8E-06 50.4 4.1 81 297-382 312-398 (400)
164 PRK06840 hypothetical protein; 91.3 0.88 1.9E-05 44.8 8.3 81 80-167 237-322 (339)
165 PRK09050 beta-ketoadipyl CoA t 91.3 0.24 5.3E-06 50.2 4.4 80 297-382 313-399 (401)
166 PRK07851 acetyl-CoA acetyltran 91.2 0.24 5.3E-06 50.3 4.3 85 297-382 319-403 (406)
167 PRK08256 lipid-transfer protei 90.5 0.64 1.4E-05 46.9 6.6 76 297-373 280-380 (391)
168 PRK09352 3-oxoacyl-(acyl carri 90.4 0.97 2.1E-05 44.0 7.7 84 77-167 216-305 (319)
169 COG0332 FabH 3-oxoacyl-[acyl-c 90.3 0.49 1.1E-05 46.4 5.3 60 73-136 216-275 (323)
170 PLN02287 3-ketoacyl-CoA thiola 89.9 0.55 1.2E-05 48.4 5.6 91 297-389 347-440 (452)
171 PRK06205 acetyl-CoA acetyltran 89.2 0.79 1.7E-05 46.5 6.1 85 297-383 314-402 (404)
172 PRK08963 fadI 3-ketoacyl-CoA t 89.0 1.1 2.4E-05 45.9 7.0 86 297-383 325-427 (428)
173 PRK06147 3-oxoacyl-(acyl carri 88.6 0.89 1.9E-05 45.2 5.9 87 82-168 236-330 (348)
174 cd00825 decarbox_cond_enzymes 88.6 1.8 3.8E-05 42.2 8.0 78 80-157 205-286 (332)
175 PRK06366 acetyl-CoA acetyltran 88.2 0.94 2E-05 45.7 5.8 57 298-355 302-358 (388)
176 PRK07515 3-oxoacyl-(acyl carri 88.1 1.4 3E-05 44.1 7.0 86 76-167 267-358 (372)
177 PRK06633 acetyl-CoA acetyltran 87.3 0.91 2E-05 45.9 5.1 53 298-351 307-359 (392)
178 TIGR02445 fadA fatty oxidation 86.8 2.1 4.6E-05 43.1 7.5 85 297-383 296-384 (385)
179 cd00831 CHS_like Chalcone and 86.8 1.6 3.6E-05 43.3 6.6 88 76-167 255-350 (361)
180 cd00327 cond_enzymes Condensin 86.5 3 6.6E-05 38.7 8.0 87 80-166 145-242 (254)
181 PRK08947 fadA 3-ketoacyl-CoA t 85.0 2.3 5E-05 42.9 6.7 74 297-371 298-374 (387)
182 COG3425 PksG 3-hydroxy-3-methy 84.5 6.2 0.00014 39.3 9.1 97 76-200 205-308 (377)
183 PRK07516 acetyl-CoA acetyltran 84.4 2.6 5.6E-05 42.5 6.8 57 297-355 276-351 (389)
184 PF02803 Thiolase_C: Thiolase, 83.3 0.9 2E-05 38.0 2.4 82 298-381 39-121 (123)
185 PRK08131 acetyl-CoA acetyltran 83.3 1.7 3.7E-05 44.1 4.9 57 298-355 313-371 (401)
186 PRK08257 acetyl-CoA acetyltran 83.3 3.3 7.2E-05 43.2 7.1 79 83-166 295-382 (498)
187 COG1214 Inactive homolog of me 82.6 5 0.00011 37.1 7.3 57 80-136 39-96 (220)
188 PRK12880 3-oxoacyl-(acyl carri 81.9 3.7 8.1E-05 40.8 6.6 50 77-130 239-288 (353)
189 PRK06690 acetyl-CoA acetyltran 81.6 4.1 8.9E-05 40.7 6.8 76 82-164 260-343 (361)
190 cd00751 thiolase Thiolase are 81.6 4.9 0.00011 40.4 7.5 41 83-127 288-328 (386)
191 PRK12578 acetyl-CoA acetyltran 81.1 3.8 8.3E-05 41.2 6.5 58 297-355 273-348 (385)
192 cd00827 init_cond_enzymes "ini 81.0 5.2 0.00011 38.8 7.2 88 75-169 218-315 (324)
193 PLN03169 chalcone synthase fam 80.4 6.7 0.00015 39.6 8.0 89 77-167 278-375 (391)
194 TIGR02446 FadI fatty oxidation 79.7 3.9 8.4E-05 41.9 6.0 57 298-355 328-401 (430)
195 PF02803 Thiolase_C: Thiolase, 79.2 3.4 7.3E-05 34.6 4.4 75 83-164 25-107 (123)
196 cd00829 SCP-x_thiolase Thiolas 78.8 7.1 0.00015 38.9 7.6 43 82-128 253-295 (375)
197 PRK06445 acetyl-CoA acetyltran 78.1 13 0.00028 37.5 9.3 75 83-164 295-377 (394)
198 PRK05656 acetyl-CoA acetyltran 77.6 8.8 0.00019 38.8 7.9 41 83-127 294-334 (393)
199 cd00826 nondecarbox_cond_enzym 77.1 5.9 0.00013 40.0 6.4 57 298-355 286-360 (393)
200 PRK09604 UGMP family protein; 76.6 6.8 0.00015 38.6 6.5 55 79-137 52-111 (332)
201 TIGR00329 gcp_kae1 metallohydr 74.9 8.4 0.00018 37.5 6.6 54 80-137 50-108 (305)
202 COG0533 QRI7 Metal-dependent p 74.8 12 0.00025 36.9 7.4 81 83-171 55-139 (342)
203 PRK14878 UGMP family protein; 74.8 9.3 0.0002 37.5 6.9 57 76-137 43-104 (323)
204 PRK09051 beta-ketothiolase; Pr 74.5 9.8 0.00021 38.5 7.2 48 83-136 295-342 (394)
205 TIGR03723 bact_gcp putative gl 73.1 9.4 0.0002 37.3 6.5 54 80-137 51-109 (314)
206 PRK08170 acetyl-CoA acetyltran 72.3 8 0.00017 39.5 6.0 20 184-203 261-280 (426)
207 PRK06519 3-oxoacyl-(acyl carri 72.0 12 0.00025 38.0 7.0 45 82-127 282-327 (398)
208 PRK07661 acetyl-CoA acetyltran 71.3 11 0.00024 38.0 6.7 42 82-127 291-332 (391)
209 PRK06064 acetyl-CoA acetyltran 71.1 12 0.00027 37.6 7.0 40 83-127 261-301 (389)
210 PRK05790 putative acyltransfer 70.3 12 0.00026 37.7 6.8 41 83-127 294-334 (393)
211 TIGR01835 HMG-CoA-S_prok 3-hyd 70.0 11 0.00024 37.9 6.3 52 75-127 200-252 (379)
212 PF07736 CM_1: Chorismate muta 69.8 14 0.00029 30.6 5.6 51 83-137 23-76 (118)
213 PRK06289 acetyl-CoA acetyltran 68.7 24 0.00052 35.7 8.5 42 82-128 278-320 (403)
214 PRK09185 3-oxoacyl-(acyl carri 67.6 15 0.00033 36.9 6.9 73 83-157 263-340 (392)
215 PF00195 Chal_sti_synt_N: Chal 67.2 7.5 0.00016 36.1 4.1 82 284-372 106-191 (226)
216 COG0304 FabB 3-oxoacyl-(acyl-c 67.2 9.4 0.0002 38.8 5.1 73 83-156 279-356 (412)
217 TIGR01796 CM_mono_aroH monofun 66.2 17 0.00038 29.9 5.5 50 84-137 24-76 (117)
218 PRK09268 acetyl-CoA acetyltran 65.8 34 0.00074 35.0 9.0 26 81-106 310-335 (427)
219 TIGR03722 arch_KAE1 universal 65.5 14 0.00031 36.1 6.0 58 75-137 43-105 (322)
220 PRK07314 3-oxoacyl-(acyl carri 64.9 11 0.00023 38.2 5.1 75 83-157 279-359 (411)
221 cd00834 KAS_I_II Beta-ketoacyl 64.8 11 0.00023 37.9 5.1 76 82-157 277-358 (406)
222 TIGR03725 bact_YeaZ universal 64.6 11 0.00024 34.2 4.7 58 79-136 34-92 (202)
223 COG4126 Hydantoin racemase [Am 63.8 49 0.0011 30.5 8.5 94 41-157 123-218 (230)
224 TIGR03150 fabF beta-ketoacyl-a 63.8 11 0.00024 38.0 4.9 45 82-126 277-322 (407)
225 KOG2707 Predicted metalloprote 63.7 12 0.00025 37.0 4.7 52 82-137 86-142 (405)
226 cd00828 elong_cond_enzymes "el 63.5 12 0.00026 37.6 5.2 26 81-106 275-300 (407)
227 PRK09605 bifunctional UGMP fam 62.1 23 0.0005 37.2 7.2 58 75-137 46-108 (535)
228 PLN02787 3-oxoacyl-[acyl-carri 62.0 18 0.00038 38.3 6.2 75 83-157 408-487 (540)
229 cd00832 CLF Chain-length facto 61.8 15 0.00032 37.2 5.5 75 82-157 272-351 (399)
230 PRK06158 thiolase; Provisional 61.5 24 0.00052 35.5 6.9 41 82-127 256-297 (384)
231 PRK06065 acetyl-CoA acetyltran 61.4 91 0.002 31.5 11.0 55 299-355 282-355 (392)
232 PRK07855 lipid-transfer protei 60.7 37 0.00079 34.2 8.0 24 83-106 269-292 (386)
233 KOG2708 Predicted metalloprote 60.4 23 0.00049 32.9 5.7 82 81-169 52-135 (336)
234 PRK07937 lipid-transfer protei 59.3 35 0.00077 33.9 7.5 77 83-166 249-334 (352)
235 PRK05952 3-oxoacyl-(acyl carri 59.3 15 0.00032 37.0 4.9 45 81-125 255-300 (381)
236 PF02801 Ketoacyl-synt_C: Beta 59.0 5.2 0.00011 32.9 1.3 75 83-157 28-110 (119)
237 cd02185 AroH Chorismate mutase 58.9 31 0.00067 28.5 5.7 50 84-137 24-76 (117)
238 PRK14691 3-oxoacyl-(acyl carri 56.3 23 0.00049 35.1 5.6 46 81-126 207-253 (342)
239 PF00814 Peptidase_M22: Glycop 56.1 6 0.00013 37.7 1.4 61 76-137 28-89 (268)
240 PLN03173 chalcone synthase; Pr 55.7 39 0.00084 34.2 7.2 51 76-130 273-323 (391)
241 PTZ00050 3-oxoacyl-acyl carrie 55.1 33 0.00072 34.9 6.8 27 82-108 285-313 (421)
242 PRK06501 3-oxoacyl-(acyl carri 54.1 19 0.00041 36.7 4.8 25 82-106 291-315 (425)
243 COG3053 CitC Citrate lyase syn 54.1 1E+02 0.0022 29.8 9.1 99 5-124 214-313 (352)
244 COG2521 Predicted archaeal met 54.0 9.4 0.0002 35.6 2.2 45 358-402 131-184 (287)
245 PRK09585 anmK anhydro-N-acetyl 52.7 42 0.00091 33.6 6.8 58 70-127 61-126 (365)
246 PTZ00340 O-sialoglycoprotein e 52.4 40 0.00086 33.5 6.5 50 83-137 54-109 (345)
247 PRK09116 3-oxoacyl-(acyl carri 52.3 22 0.00048 36.0 4.9 44 82-125 277-321 (405)
248 PRK06333 3-oxoacyl-(acyl carri 52.3 24 0.00051 35.9 5.1 44 82-125 290-334 (424)
249 PLN03172 chalcone synthase fam 52.1 45 0.00098 33.7 7.0 79 285-370 109-191 (393)
250 PLN03170 chalcone synthase; Pr 51.9 45 0.00097 33.8 7.0 50 77-130 278-327 (401)
251 PRK08722 3-oxoacyl-(acyl carri 51.8 30 0.00064 35.2 5.7 44 82-125 280-324 (414)
252 PRK07910 3-oxoacyl-(acyl carri 51.1 30 0.00066 35.2 5.7 45 82-126 288-333 (418)
253 PTZ00455 3-ketoacyl-CoA thiola 51.0 37 0.00081 34.8 6.3 43 82-128 311-353 (438)
254 KOG1390 Acetyl-CoA acetyltrans 48.7 11 0.00023 36.7 1.7 58 297-356 310-371 (396)
255 smart00825 PKS_KS Beta-ketoacy 47.5 37 0.00081 34.3 5.7 26 81-106 280-305 (424)
256 PLN03168 chalcone synthase; Pr 47.5 60 0.0013 32.7 7.1 79 284-369 107-189 (389)
257 cd00833 PKS polyketide synthas 46.4 43 0.00093 33.7 6.0 27 80-106 279-305 (421)
258 PLN02836 3-oxoacyl-[acyl-carri 46.1 41 0.00089 34.4 5.8 25 82-106 301-325 (437)
259 PRK13410 molecular chaperone D 45.2 84 0.0018 34.2 8.2 67 78-148 307-373 (668)
260 PRK08304 stage V sporulation p 44.0 88 0.0019 30.9 7.3 85 83-169 211-311 (337)
261 PRK05183 hscA chaperone protei 43.6 1E+02 0.0022 33.3 8.4 44 82-127 311-355 (616)
262 TIGR02845 spore_V_AD stage V s 43.5 91 0.002 30.6 7.3 86 83-169 205-304 (327)
263 KOG1394 3-oxoacyl-(acyl-carrie 43.4 18 0.00038 35.8 2.4 46 82-127 303-349 (440)
264 PRK12404 stage V sporulation p 42.5 95 0.0021 30.5 7.2 86 83-169 209-309 (334)
265 TIGR03285 methan_mark_14 putat 41.9 51 0.0011 32.7 5.2 41 74-114 61-103 (445)
266 TIGR01991 HscA Fe-S protein as 41.3 1.5E+02 0.0032 31.8 9.2 44 82-127 295-339 (599)
267 PLN02854 3-ketoacyl-CoA syntha 41.1 1E+02 0.0022 32.4 7.7 42 82-127 387-434 (521)
268 CHL00094 dnaK heat shock prote 40.9 1.2E+02 0.0026 32.7 8.5 54 73-127 299-355 (621)
269 PF02801 Ketoacyl-synt_C: Beta 39.6 22 0.00048 29.1 2.2 57 297-354 41-104 (119)
270 PLN03171 chalcone synthase-lik 39.6 97 0.0021 31.3 7.2 87 77-168 276-382 (399)
271 PRK06066 acetyl-CoA acetyltran 39.3 1.2E+02 0.0025 30.7 7.6 41 83-128 259-302 (385)
272 PRK08142 acetyl-CoA acetyltran 39.1 35 0.00077 34.4 3.9 41 82-127 257-298 (388)
273 PRK06365 acetyl-CoA acetyltran 37.5 91 0.002 31.9 6.7 41 83-128 296-339 (430)
274 PLN02377 3-ketoacyl-CoA syntha 36.9 95 0.0021 32.5 6.7 75 285-369 179-260 (502)
275 PF01135 PCMT: Protein-L-isoas 36.8 37 0.00079 31.1 3.3 38 342-379 53-90 (209)
276 KOG1406 Peroxisomal 3-ketoacyl 36.2 36 0.00078 32.3 3.1 29 78-106 270-298 (408)
277 COG3072 CyaA Adenylate cyclase 35.3 26 0.00056 37.1 2.3 57 297-356 114-193 (853)
278 PTZ00186 heat shock 70 kDa pre 35.3 1.2E+02 0.0027 32.8 7.6 70 73-147 324-397 (657)
279 PRK07103 polyketide beta-ketoa 34.8 80 0.0017 32.0 5.8 24 83-106 284-307 (410)
280 PRK06059 lipid-transfer protei 34.5 75 0.0016 32.0 5.5 58 297-355 289-364 (399)
281 PF12633 Adenyl_cycl_N: Adenyl 33.7 38 0.00083 30.9 2.8 56 298-356 114-192 (204)
282 PLN03184 chloroplast Hsp70; Pr 33.2 1.2E+02 0.0026 33.1 7.1 62 81-147 347-409 (673)
283 PTZ00009 heat shock 70 kDa pro 33.1 1.2E+02 0.0027 32.8 7.2 52 73-126 303-358 (653)
284 COG4401 AroH Chorismate mutase 32.4 1.4E+02 0.0031 24.4 5.5 52 86-141 28-81 (125)
285 PF07451 SpoVAD: Stage V sporu 32.0 42 0.00092 32.6 3.0 85 83-169 206-306 (329)
286 PLN02569 threonine synthase 30.6 74 0.0016 33.2 4.7 45 342-386 407-451 (484)
287 PRK00290 dnaK molecular chaper 30.1 1.5E+02 0.0031 32.0 7.1 65 80-148 307-371 (627)
288 PF12244 DUF3606: Protein of u 29.9 36 0.00078 24.2 1.6 29 311-342 20-48 (57)
289 PRK13411 molecular chaperone D 29.4 1.3E+02 0.0029 32.6 6.6 52 73-126 298-353 (653)
290 PLN02932 3-ketoacyl-CoA syntha 28.1 1.6E+02 0.0035 30.7 6.6 66 295-369 164-236 (478)
291 TIGR02350 prok_dnaK chaperone 28.1 1.3E+02 0.0029 32.1 6.3 47 80-127 305-351 (595)
292 PLN02192 3-ketoacyl-CoA syntha 28.1 1.6E+02 0.0035 30.9 6.7 77 286-369 184-264 (511)
293 PRK08313 acetyl-CoA acetyltran 27.6 90 0.0019 31.4 4.7 42 82-128 257-301 (386)
294 COG3424 BcsA Predicted naringe 27.1 2E+02 0.0043 28.2 6.5 71 281-355 79-153 (356)
295 PF09887 DUF2114: Uncharacteri 27.0 1.4E+02 0.003 29.9 5.5 41 74-114 63-106 (448)
296 PRK06157 acetyl-CoA acetyltran 26.6 1E+02 0.0023 31.0 5.0 42 82-128 268-312 (398)
297 COG2518 Pcm Protein-L-isoaspar 26.4 84 0.0018 28.8 3.8 37 347-384 58-94 (209)
298 PLN00415 3-ketoacyl-CoA syntha 24.9 1.4E+02 0.0031 30.9 5.5 68 296-369 151-222 (466)
299 COG2377 Predicted molecular ch 24.2 1.6E+02 0.0035 29.3 5.5 59 69-127 62-130 (371)
300 PTZ00400 DnaK-type molecular c 23.8 1.4E+02 0.003 32.5 5.6 54 72-127 337-394 (663)
301 KOG1391 Acetyl-CoA acetyltrans 22.5 1.2E+02 0.0026 28.8 4.0 24 83-106 296-319 (396)
302 PF08392 FAE1_CUT1_RppA: FAE1/ 21.6 3E+02 0.0065 26.6 6.7 68 297-370 101-172 (290)
303 TIGR02813 omega_3_PfaA polyket 20.5 1.6E+02 0.0035 37.3 5.7 75 83-157 318-401 (2582)
304 PF11392 DUF2877: Protein of u 20.3 1.4E+02 0.0031 24.2 3.6 46 309-354 64-109 (110)
305 PF03702 UPF0075: Uncharacteri 20.1 1.1E+02 0.0023 30.7 3.5 55 73-127 61-125 (364)
No 1
>PLN02192 3-ketoacyl-CoA synthase
Probab=100.00 E-value=2.3e-69 Score=545.78 Aligned_cols=411 Identities=90% Similarity=1.418 Sum_probs=372.1
Q ss_pred eEEEEeeeeecCCCCccccHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCceeecCCcccCCCCCccHHHHHHHHHHHH
Q 015082 3 FGSISNFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDSTYLPEAVLNIPPNPSMKEARKEAEAVM 82 (413)
Q Consensus 3 ~v~I~~ig~~lP~~~~~v~~~el~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~ma~~~~~~~~la 82 (413)
.||++..++|.|++.++++.+.+.+.....+.++++.+++.+++.+++|+.+..+.++..+..++..+|...++++.+++
T Consensus 101 ~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sglg~~t~~p~~~~~~~~~~~~~~~~~Ea~~~~ 180 (511)
T PLN02192 101 PVYLVDFSCYKPDDSRKCTRKIFMDRSKLTGSFTEENLEFQRKILERSGLGESTYLPEAVLNVPPNPCMAEARKEAETVM 180 (511)
T ss_pred cEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHhcCCCCcccCChhhccCCCCccHHHHHHHHHHHH
Confidence 48999999999998899999999999998888999999999999999999999988887666566779999999999999
Q ss_pred HHHHHHHHHhCCCCCCCcCeEEEEccCCCCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHHcCCCCeE
Q 015082 83 FGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYA 162 (413)
Q Consensus 83 ~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~~g~~~~v 162 (413)
..|+++||+++|++|+|||.||++|++++..|+++..|++++|+++++.+||++++||+||+.||++|.+++++++.++|
T Consensus 181 ~~Aa~~aL~kaGi~p~DIDiLIv~~S~~~~~PSlaa~I~n~lGlr~~i~afdLsgmGCSggl~aLdlA~~lL~a~~~~~a 260 (511)
T PLN02192 181 FGAIDQLLAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNILSYNLGGMGCSAGLISIDLAKHLLQVHPNSYA 260 (511)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCchHHHHHHHHhCCCCCceEEEcccchhhhHHHHHHHHHHHHHcCCCCeE
Confidence 99999999999999999999999988888899999999999999878999999988999999999999999999999999
Q ss_pred EEEEEccccCCCccCCCccchhhhcccccCceEEEEecCCCCcccccceEeeeeeeecCCCCccccccccccCCCCceee
Q 015082 163 LVISMENITLNWYFGNDRSKLVSNCLFRMGGAAILLSNRFSDRRRSKYRLVHTVRTHKGADDNCFACVTQEEDSEGKVGV 242 (413)
Q Consensus 163 LVv~~e~~s~~~~~~~d~~~~~~~~lfGDGAaA~ll~~~~~~~~~~~~~i~~~~~~~~~td~~~~~~~~~~~~~~g~~~~ 242 (413)
|||++|.+|.+++..+||.+++.+.+|||||+|+||++.+....++.|++.+...++..++++.++.++++++.+|+.|+
T Consensus 261 LVVstE~~S~n~y~g~drs~lv~n~LFgDGAaAvLLs~~~~~~~~~k~~L~~~vrt~~~~dd~~~~~v~~~ed~~g~~g~ 340 (511)
T PLN02192 261 LVISMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNKRSDRRRSKYQLVHTVRTHKGADDKCFACVTQEEDSAGKIGV 340 (511)
T ss_pred EEEEEEeccccCCCCCCHHHHhccccccccceEEEEeccccccccccceeeeeEEEEecCChhhccceecccccccceee
Confidence 99999999976666678888777789999999999998643322245677777778888899888888888888888999
Q ss_pred EecchhhHHhHHhhhhhhhhcCCCccchhHHHHHHHHHHHHHhhhhccCCCccchhccccEEEecCCChHHHHHHHHhcC
Q 015082 243 TLSKNLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLQ 322 (413)
Q Consensus 243 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~al~~~~~~~~~did~~i~hq~~~~~~~~i~~~lg 322 (413)
.+++++|...++.++.+++.++|.+.|..++..+++.|.++++|+.+++.+.+....+||+|++||+|+.+++.+++.||
T Consensus 341 ~Lskdl~~vag~al~~ni~~l~p~vlp~~e~~~~~~~m~gr~vfk~~~~~~~p~~~~~Idhf~iHqggr~IId~v~k~Lg 420 (511)
T PLN02192 341 SLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKLKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLQ 420 (511)
T ss_pred EecchhhhhhhhhhhhhhhhcccccCccchhhceeEEEcChHHHHHHhhhccHHHHHhhceEeeccCCHHHHHHHHHHcC
Confidence 99999999988888888888888887777666556678889999888876666677899999999999999999999999
Q ss_pred CCcccchhhHHHHhhhcCCCcchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhhhhhhhhccccCCcccCCCccccccc
Q 015082 323 LSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVWKALRSINSAKEKNPWMDEIHH 402 (413)
Q Consensus 323 i~~e~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~l~~Gd~vll~~~G~G~~~~a~llr~~~~~~~~~~~~~~~~~~~~ 402 (413)
+++++++.++.++++||||+|+|+++.|+++.++|++++||+|++++||+|++|++++|||..++.+.++.|||.|.||+
T Consensus 421 L~~~~~e~sr~tL~rfGNTSSaSI~~aL~~~eakgrik~GDrVl~iaFGsGf~~~sav~~~~~~~~~~~~~~~w~~~i~~ 500 (511)
T PLN02192 421 LSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVWKALRTVNPAKEKNPWMDEIHE 500 (511)
T ss_pred CCchhhhHHHHHHhHcCChHHhHHHHHHHHHHHcCCCCCCCEEEEEEEcchHhhhhhheeeecccCCcccCCCchhhHHh
Confidence 99877777799999999999999999999999999999999999999999999999999999998887777999999999
Q ss_pred CCcCCCCccCC
Q 015082 403 FPVDVPKVSTI 413 (413)
Q Consensus 403 ~~~~~~~~~~~ 413 (413)
|||.+|++.||
T Consensus 501 yp~~~~~~~~~ 511 (511)
T PLN02192 501 FPVDVPKVSTI 511 (511)
T ss_pred CCCCCCCCCCC
Confidence 99999999987
No 2
>PLN02932 3-ketoacyl-CoA synthase
Probab=100.00 E-value=1.8e-67 Score=530.49 Aligned_cols=404 Identities=61% Similarity=1.041 Sum_probs=359.3
Q ss_pred eEEEEeeeeecCCCCccccHHHHHHHHHhc---CCCChhh---HHHHHHHHHHcCCCceeecCCcccCCCCCccHHHHHH
Q 015082 3 FGSISNFSCYKPEESRKCTKRIFMDQSRMT---GTFTEEN---LQFQKKILERSGLGDSTYLPEAVLNIPPNPSMKEARK 76 (413)
Q Consensus 3 ~v~I~~ig~~lP~~~~~v~~~el~~~~~~~---~~~~~~~---~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~ma~~~~ 76 (413)
.||++..++|.|++.++++.+.+.+..... +.++++. +++.+||.+++||++|++.++..+..++..+|..+++
T Consensus 67 ~vyl~d~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~i~~rsGig~~t~~p~~~~~~~~~~~~~~~~~ 146 (478)
T PLN02932 67 PVYLVDFSCYLPPSHLKASIQTIMGHVRRVREAGAWKQESDYLMDFCEKILERSGLGQETYIPEGLQCLPLQQNLAVSRK 146 (478)
T ss_pred cEEEEeeeeecCcccccccHHHHHHHHHhhcccCCCCccchhHHHHHHHHHHHcCCCCceeeccccccCCHHHHHHHHHH
Confidence 489999999999998999999999988654 4577666 8999999999999999998876554445668999999
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCcCeEEEEccCCCCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHHc
Q 015082 77 EAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQV 156 (413)
Q Consensus 77 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~~ 156 (413)
++.+|+.+|+++||+++|++|+|||.||++|+++...|+++.+|+++||+++++.+||++|+||+|++.||++|.+++++
T Consensus 147 ea~~la~~Aa~~aL~~agi~p~dId~lIv~tst~~~~Pslaa~V~~~lGlr~~i~~fdL~gmGCSggl~aL~lA~~ll~~ 226 (478)
T PLN02932 147 ETEEVIIGAVDNLFRNTGISPSDIGILVVNSSTFNPTPSLSSILVNKFKLRDNIKSLNLGGMGCSAGVIAIDAAKSLLQV 226 (478)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCCCCcHHHHHHHHhCCCCCceEEEeccchhhhHHHHHHHHHHHHHc
Confidence 99999999999999999999999999999986555899999999999999878999999988999999999999999999
Q ss_pred CCCCeEEEEEEccccCCCccCCCccchhhhcccccCceEEEEecCCCCcccccceEeeeeeeecCCCCccccccccccCC
Q 015082 157 HPNSYALVISMENITLNWYFGNDRSKLVSNCLFRMGGAAILLSNRFSDRRRSKYRLVHTVRTHKGADDNCFACVTQEEDS 236 (413)
Q Consensus 157 g~~~~vLVv~~e~~s~~~~~~~d~~~~~~~~lfGDGAaA~ll~~~~~~~~~~~~~i~~~~~~~~~td~~~~~~~~~~~~~ 236 (413)
++.++||||++|.+|.++...+++..++++.+|||||+|+||++.+....+..|++.+...++..+|++.++.++++.+.
T Consensus 227 ~~~~~aLVVstE~~S~~~~~~d~r~~l~t~~LFgDGAAAvlLs~~~~~~~~~~~~L~~~v~t~~~ad~~~~~~v~~~~d~ 306 (478)
T PLN02932 227 HRNTYALVVSTENITQNLYLGNNKSMLVTNCLFRIGGAAILLSNRSRDRKRAKYELVHTVRVHTGADDRSYECATQEEDE 306 (478)
T ss_pred CCCCeEEEEEEeecccccCCCcchhhhccceeecccceEEEEecccccccCcceEEEeeeeeeeccCCCccccceeeccc
Confidence 99999999999999996644455555667899999999999998653212245788877788888999999988888776
Q ss_pred CCceeeEecchhhHHhHHhhhhhhhhcCCCccchhHHHHHHHHHHHHHhhhhccCCCccchhccccEEEecCCChHHHHH
Q 015082 237 EGKVGVTLSKNLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDE 316 (413)
Q Consensus 237 ~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~al~~~~~~~~~did~~i~hq~~~~~~~~ 316 (413)
.|..|+.+++++|...++.++.+++.+||.+.|+.+.+.+++.+.++++++.+++.+.+...++||+|++||+|+.+++.
T Consensus 307 ~G~~g~~Lsk~lp~~~~~al~~ni~~~~p~v~p~~e~~~~~~~~~~~~~~k~~~~~~~~~~~~~id~f~iHqggr~IIda 386 (478)
T PLN02932 307 DGIVGVSLSKNLPMVAARTLKINIATLGPLVLPLSEKFHFFVRFVKKKFFNPKLKHYIPDFKLAFEHFCIHAGGRALIDE 386 (478)
T ss_pred CCcceeeECccchHHHHHHHhhhhhccccccccchhhhHHHHHHhHHHHHHHHhhcCcHhHHhhhceEEEccCCHHHHHH
Confidence 77779999999999989999999999999999988888888888999999877766666667899999999999999999
Q ss_pred HHHhcCCCcccchhhHHHHhhhcCCCcchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhhhhhhhhccccCCcccCCCc
Q 015082 317 LEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVWKALRSINSAKEKNPW 396 (413)
Q Consensus 317 i~~~lgi~~e~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~l~~Gd~vll~~~G~G~~~~a~llr~~~~~~~~~~~~~~ 396 (413)
+++.||++++++++|+.++++||||+|+|+++.|+++.++|++++||+|++++||+|++|++++||....+.+.+ .|||
T Consensus 387 v~k~LgL~~~~~e~s~~tL~rfGNTSSaSI~~~L~~~ea~grik~Gd~vl~iaFGsGf~~~s~vw~~~~~~~~~~-~~~w 465 (478)
T PLN02932 387 MEKNLHLTPLDVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMKKGDRIWQIALGSGFKCNSSVWVALRNVKPSA-NNPW 465 (478)
T ss_pred HHHHcCCChHHHHHHHHHHHHhCChhhhHHHHHHHHHHHcCCCCCCCEEEEEEEeccHHHHHHHHHHhcCCCCcC-CCCc
Confidence 999999999888888999999999999999999999999999999999999999999999999999999877653 5999
Q ss_pred ccccccCCcCC
Q 015082 397 MDEIHHFPVDV 407 (413)
Q Consensus 397 ~~~~~~~~~~~ 407 (413)
.|.||+|||.+
T Consensus 466 ~~~i~~yp~~~ 476 (478)
T PLN02932 466 EDCLHKYPVEI 476 (478)
T ss_pred hhhHhhCCCCC
Confidence 99999999953
No 3
>PLN02854 3-ketoacyl-CoA synthase
Probab=100.00 E-value=7.8e-66 Score=521.17 Aligned_cols=407 Identities=72% Similarity=1.214 Sum_probs=356.6
Q ss_pred eEEEEeeeeecCCCCccccHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCceeecCCcccCCCCCccHHHHHHHHHHHH
Q 015082 3 FGSISNFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDSTYLPEAVLNIPPNPSMKEARKEAEAVM 82 (413)
Q Consensus 3 ~v~I~~ig~~lP~~~~~v~~~el~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~ma~~~~~~~~la 82 (413)
.||++..++|.|++.++++.+.+.+.....+.++++.+++.+++.+++|+.+..+.++..+..++..+|+.+++++..+.
T Consensus 113 ~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sg~g~~ty~P~~~~~~~~~~~~~~~r~ea~~v~ 192 (521)
T PLN02854 113 PVYLVDFACYKPEDERKISVDSFLTMTEENGSFEDETVQFQRRISTRSGLGDETYLPRGITSRPPNLCMEEARAEAEAVM 192 (521)
T ss_pred cEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHhcCCCCccccCccccCCCCcchHHHHHHHHHHHH
Confidence 48999999999999899999999999998888999999999999999999999888887665566779999999999999
Q ss_pred HHHHHHHHHhCCCCCCCcCeEEEEccCCCCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHHcCCCCeE
Q 015082 83 FGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYA 162 (413)
Q Consensus 83 ~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~~g~~~~v 162 (413)
..|++++|+++|++|+|||.||++|++++..|+++.+|+++||+++++.++|++|+||+|++.||++|.+++++++.++|
T Consensus 193 ~~~~~~lL~kaGi~p~dID~LIv~cS~~~p~PSlAa~I~n~LGlr~~i~afdLsgmGCSggl~aL~lA~~lL~~~~~~~a 272 (521)
T PLN02854 193 FGALDSLFSKTGVKPRDIGILIVNCSLFNPTPSLSAMIVNHYKLRTDIKSYNLGGMGCSAGLISIDLANDLLKANPNSYA 272 (521)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhCCCCCceEEecccchhhhHHHHHHHHHHHHHhCCCCeE
Confidence 99999999999999999999999888888899999999999999878999999988999999999999999999999999
Q ss_pred EEEEEccccCCCccCCCccchhhhcccccCceEEEEecCCCCcccccceEeeeeeeecCCCCccccccccccCCCCceee
Q 015082 163 LVISMENITLNWYFGNDRSKLVSNCLFRMGGAAILLSNRFSDRRRSKYRLVHTVRTHKGADDNCFACVTQEEDSEGKVGV 242 (413)
Q Consensus 163 LVv~~e~~s~~~~~~~d~~~~~~~~lfGDGAaA~ll~~~~~~~~~~~~~i~~~~~~~~~td~~~~~~~~~~~~~~g~~~~ 242 (413)
|||++|.+|.+++..+||.++++..+|||||+|+||++.+...++..|++.+++.+++.+|++.++.++++++..|..++
T Consensus 273 LVVstE~~S~~~y~g~Drs~lv~~~LFgDGAAAvlLs~~~~~~~~~k~~L~~~v~t~~~ad~~~~~~i~~~~d~~G~~g~ 352 (521)
T PLN02854 273 VVVSTENITLNWYFGNDRSMLLCNCIFRMGGAAVLLSNKARDRKRSKYQLVHTVRTHKGADDKNYNCVYQREDDKGTIGV 352 (521)
T ss_pred EEEEEeeeecCCCCCCchhhhcceeeeccceeEEEEecccccccccchheeeEEEEEEeeCCCccCeEEeccCCCCcccc
Confidence 99999999976655588888777899999999999998653322345788888888888999989988888765565677
Q ss_pred EecchhhHHhHHhhhhhhhhcCCCccchhHHHHHHHHHHHHHhhhhccCCCccchhccccEEEecCCChHHHHHHHHhcC
Q 015082 243 TLSKNLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLQ 322 (413)
Q Consensus 243 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~al~~~~~~~~~did~~i~hq~~~~~~~~i~~~lg 322 (413)
.+++++|...++.++.+++.+|+.+.++.+++.+......+.+.+..++...+..++|||||++||+|+.+++.+++.||
T Consensus 353 ~lsk~l~~va~~~l~~~i~~~g~~Vl~~se~~~f~~~~i~~~L~~~gl~~~~pd~~~didhf~iHqggr~IId~v~k~Lg 432 (521)
T PLN02854 353 SLARELMAVAGDALKTNITTLGPLVLPLSEQFMFFVTLVRRKLLKAKVKPYIPDFKLAFEHFCIHAGGRAVLDELQKNLQ 432 (521)
T ss_pred cccccccchhhhhhhhhhhhccccccchHHHHHHHHHHHHHHHHHcCCCccCCcccccCcEEEECCCCHHHHHHHHHHcC
Confidence 88888887767777888888999999988776544444444444545543334456899999999999999999999999
Q ss_pred CCcccchhhHHHHhhhcCCCcchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhhhhhhhhccccCCcc-cCCCcccccc
Q 015082 323 LSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVWKALRSINSAK-EKNPWMDEIH 401 (413)
Q Consensus 323 i~~e~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~l~~Gd~vll~~~G~G~~~~a~llr~~~~~~~~~-~~~~~~~~~~ 401 (413)
+++++.+.++.++++||||+|||+|+.|+++.++|++++||+|++++||+|++|++++|||...+.+.+ +.|||.|.||
T Consensus 433 L~~~~~e~sr~tL~rfGNTSSASI~~~L~~~~~kGrik~GD~Vl~iaFGsGft~~sav~~~~~~~~~~~~~~~~w~~~i~ 512 (521)
T PLN02854 433 LSDWHMEPSRMTLHRFGNTSSSSLWYELAYTEAKGRVSAGDRVWQIAFGSGFKCNSAVWKALREIPTGESTGNPWADSID 512 (521)
T ss_pred CCcccccchHHHhhhcCChHhhHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhhhheeeEEeccCCccccCCCCchhhHh
Confidence 997666667999999999999999999999999999999999999999999999999999999877752 4599999999
Q ss_pred cCCcCCCC
Q 015082 402 HFPVDVPK 409 (413)
Q Consensus 402 ~~~~~~~~ 409 (413)
+|||.+|+
T Consensus 513 ~yp~~~~~ 520 (521)
T PLN02854 513 RYPVKVPV 520 (521)
T ss_pred hCCCCCCC
Confidence 99999985
No 4
>PLN02377 3-ketoacyl-CoA synthase
Probab=100.00 E-value=4.1e-65 Score=516.21 Aligned_cols=404 Identities=69% Similarity=1.173 Sum_probs=348.2
Q ss_pred eEEEEeeeeecCCCCccccHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCceeecCCcccCCCCCccHHHHHHHHHHHH
Q 015082 3 FGSISNFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDSTYLPEAVLNIPPNPSMKEARKEAEAVM 82 (413)
Q Consensus 3 ~v~I~~ig~~lP~~~~~v~~~el~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~ma~~~~~~~~la 82 (413)
.||++..++|.|++.++++.+.+.+.....+.++++.+++.++|.+++||.+..+.++..+..++..+|+.+++++.+++
T Consensus 97 ~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ri~~~sgig~~t~~p~~~~~~~~~~~~~~~~~ea~~l~ 176 (502)
T PLN02377 97 PVYLVDYSCYRAPDHLKAPFARFMEHSRLTGDFDDSSLEFQRKILERSGLGEDTYVPEAMHYIPPRPSMAAAREEAEQVM 176 (502)
T ss_pred CEEEEeeeeecCCccccccHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCCCccccCchhccCCccchHHHHHHHHHHHH
Confidence 48999999999999899999999999998888999999999999999999887677765544456679999999999999
Q ss_pred HHHHHHHHHhCCCCCCCcCeEEEEccCCCCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHHcCCCCeE
Q 015082 83 FGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYA 162 (413)
Q Consensus 83 ~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~~g~~~~v 162 (413)
..|+++||+++|++|+|||.||+.|++++..|+++.+|+++||+++++.++|++|+||+|++.||++|.+++++++.++|
T Consensus 177 ~~A~~~aL~kaGi~p~dID~LVv~cS~~~~~PSlaa~V~~~LGlr~~v~afdL~gmGCsggl~aL~lA~~ll~~~~~~~a 256 (502)
T PLN02377 177 FGALDNLFANTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAVDLAKDMLQVHRNTYA 256 (502)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhCCCCCCeEEecccchhhHHHHHHHHHHHHHHcCCCCEE
Confidence 99999999999999999999998777888899999999999999888999999988999999999999999999999999
Q ss_pred EEEEEccccCCCccCCCccchhhhcccccCceEEEEecCCCCcccccceEeeeeeeecCCCCccccccccccCCCCceee
Q 015082 163 LVISMENITLNWYFGNDRSKLVSNCLFRMGGAAILLSNRFSDRRRSKYRLVHTVRTHKGADDNCFACVTQEEDSEGKVGV 242 (413)
Q Consensus 163 LVv~~e~~s~~~~~~~d~~~~~~~~lfGDGAaA~ll~~~~~~~~~~~~~i~~~~~~~~~td~~~~~~~~~~~~~~g~~~~ 242 (413)
|||++|.+|.++...+++..++++.+|||||+|+||++.+....+..+++.+++.++..++++.++.++++++..|+.++
T Consensus 257 LVVstE~~S~~~~~~d~~s~lv~n~LFgDGAaAvlLs~~~~~~~~a~~~l~~iv~t~~~~d~~~~~~i~~~~d~~G~~g~ 336 (502)
T PLN02377 257 VVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKSRDKRRSKYKLVHVVRTHRGADDKAFRCVYQEQDDAGKTGV 336 (502)
T ss_pred EEEEEeccccccCCCCCccccccceeeccccEEEEEecccccccccccccceEEEEEEEEcCCccceeeeccccCCCCCC
Confidence 99999999986543344455566799999999999998543322234665567777778888888888877666677788
Q ss_pred EecchhhHHhHHhhhhhhhhcCCCccchhHHHHHHHHHHHHHhhhhccCCCccchhccccEEEecCCChHHHHHHHHhcC
Q 015082 243 TLSKNLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLQ 322 (413)
Q Consensus 243 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~al~~~~~~~~~did~~i~hq~~~~~~~~i~~~lg 322 (413)
++++++|...++.++.+++.+|+.+.++.++...+.....+++++..++...+...+|||+|++||+|+.+++.+++.||
T Consensus 337 ~ls~dl~~v~g~~l~~~i~~lg~~vl~~se~~~~~a~~~~~~~~~~~l~~~~p~~~~didhf~iHqggr~IId~v~k~Lg 416 (502)
T PLN02377 337 SLSKDLMAIAGEALKTNITTLGPLVLPISEQLLFFATLVVKKLFNKKMKPYIPDFKLAFDHFCIHAGGRAVIDELEKNLQ 416 (502)
T ss_pred CCCcchhhHhhHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhhccCCcHhhcCEEEECCCCHHHHHHHHHHcC
Confidence 89999998888888899999999998887765444333344555555543233457899999999999999999999999
Q ss_pred CCcccchhhHHHHhhhcCCCcchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhhhhhhhhccccCCcccCCCccccccc
Q 015082 323 LSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVWKALRSINSAKEKNPWMDEIHH 402 (413)
Q Consensus 323 i~~e~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~l~~Gd~vll~~~G~G~~~~a~llr~~~~~~~~~~~~~~~~~~~~ 402 (413)
++++++++++.++++||||+|||+++.|+++.++|++++||+|++++||+|++|++++|||...+.+.+ .|||.|.||+
T Consensus 417 L~~~~~e~sr~tL~r~GNTSSaSI~~aL~~~~~~grik~Gd~VlliaFGsGf~~~s~v~~~~~~~~~~~-~~~w~~~i~~ 495 (502)
T PLN02377 417 LLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMRKGNRVWQIAFGSGFKCNSAVWEALRHVKPSN-NSPWEDCIDK 495 (502)
T ss_pred CCcccchHHHHHHHhcCCchhhHHHHHHHHHHHcCCCCCCCeEEEEEEccccEeeeEEEEEecCCCCCC-CCCchhhHhh
Confidence 998777778999999999999999999999999999999999999999999999999999999877754 4999999999
Q ss_pred CCcCC
Q 015082 403 FPVDV 407 (413)
Q Consensus 403 ~~~~~ 407 (413)
|||.+
T Consensus 496 yp~~~ 500 (502)
T PLN02377 496 YPVKL 500 (502)
T ss_pred CCCcc
Confidence 99953
No 5
>PLN00415 3-ketoacyl-CoA synthase
Probab=100.00 E-value=3e-61 Score=479.59 Aligned_cols=405 Identities=61% Similarity=1.068 Sum_probs=350.1
Q ss_pred eEEEEeeeeecCCCCccccHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCceeecCCcccCCCCCccHHHHHHHHHHHH
Q 015082 3 FGSISNFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDSTYLPEAVLNIPPNPSMKEARKEAEAVM 82 (413)
Q Consensus 3 ~v~I~~ig~~lP~~~~~v~~~el~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~ma~~~~~~~~la 82 (413)
.||++..++|.|++.++++.+.+.+.....+.++++.+++.++|.+++||.+-.+.++..+..++..+|...++++....
T Consensus 59 ~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~F~~~i~~rSGlg~et~~p~~~~~~~~~~~~~~~~~e~em~i 138 (466)
T PLN00415 59 PVYLVDFSCHQPTDSCKISSETFFNMAKGAQLYTEETIQFMTRILNRSGLGDDTYSPRCMLTSPPTPSMYEARHESELVI 138 (466)
T ss_pred cEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCCCCeeeCCccccCCCCCChhhhHHHHHHHH
Confidence 48999999999998899999999999988888999999999999999999998777765444345567888888888888
Q ss_pred HHHHHHHHHhCCCCCCCcCeEEEEccCCCCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHHcCCCCeE
Q 015082 83 FGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYA 162 (413)
Q Consensus 83 ~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~~g~~~~v 162 (413)
..|+++||+++|++|+|||.||++|++++..|+++..+++++|+++++.++|++++||+|++.||++|.+++++++.++|
T Consensus 139 ~~A~~~aL~~aGi~p~dID~LIvs~T~~~~~Pslaa~l~~~LGLr~~v~~~dL~gmGCsggv~aL~lA~~ll~a~~~~~a 218 (466)
T PLN00415 139 FGALNSLFKKTGIEPREVGIFIVNCSLFNPNPSLSSMIVNRYKLKTDVKTYNLSGMGCSAGAISVDLATNLLKANPNTYA 218 (466)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECcCCCCCchHHHHHHHHhCCCCCceEEEeccccchHHHHHHHHHHHHHHhCCCCEE
Confidence 88999999999999999999998777777799999999999999989999999977999999999999999999999999
Q ss_pred EEEEEccccCCCccCCCccchhhhcccccCceEEEEecCCCCcccccceEeeeeeeecCCCCccccccccccCCCCceee
Q 015082 163 LVISMENITLNWYFGNDRSKLVSNCLFRMGGAAILLSNRFSDRRRSKYRLVHTVRTHKGADDNCFACVTQEEDSEGKVGV 242 (413)
Q Consensus 163 LVv~~e~~s~~~~~~~d~~~~~~~~lfGDGAaA~ll~~~~~~~~~~~~~i~~~~~~~~~td~~~~~~~~~~~~~~g~~~~ 242 (413)
|||++|.+|.+++++.|+.++++.++|||||+|+||++++....++.|++.+++.++...+.+.+..++...+..|..++
T Consensus 219 LVVs~E~~S~~~~~~~dr~~lv~n~LFgDGAAAvlLs~~~~~~~~~~~~L~~~vrt~~~~~d~~~~~~~~~~d~~G~~gv 298 (466)
T PLN00415 219 VIVSTENMTLSMYRGNDRSMLVPNCLFRVGGAAVMLSNRSQDRVRSKYELTHIVRTHKGSSDKHYTCAEQKEDSKGIVGV 298 (466)
T ss_pred EEEEEecccccccCCCcHhHhccceeecccceEEEEecCcccccCccceeeeEEEecCCCChhhhcceeeeecCCCcceE
Confidence 99999999987667788888777899999999999998754333356888777777665554455555566666677799
Q ss_pred EecchhhHHhHHhhhhhhhhcCCCccchhHHHHHHHHHHHHHhhhhccCCCccchhccccEEEecCCChHHHHHHHHhcC
Q 015082 243 TLSKNLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLQ 322 (413)
Q Consensus 243 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~al~~~~~~~~~did~~i~hq~~~~~~~~i~~~lg 322 (413)
.+++++|.+.++.++.+++.+++.+.|+.++.++.....++++++..++...++...-+++|++|++++++++.+++.||
T Consensus 299 ~Lsk~lp~va~~~l~~ni~~l~p~vlp~~e~~~~~~~~i~~~~~~~~~~~~~pd~~~~~~hf~iHpGGraVLdave~~Lg 378 (466)
T PLN00415 299 ALSKELTVVAGDTLKTNLTALGPLVLPLSEKLRFILFLVKSKLFRLKVSPYVPDFKLCFKHFCIHAGGRALLDAVEKGLG 378 (466)
T ss_pred EEChHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHhhhhhhccCCCCCCCccccceeEEecCCcHHHHHHHHHHcC
Confidence 99999999999999999999999999988876655555556666544443333332338899999999999999999999
Q ss_pred CCcccchhhHHHHhhhcCCCcchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhhhhhhhhccccCCcc--cCCCccccc
Q 015082 323 LSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVWKALRSINSAK--EKNPWMDEI 400 (413)
Q Consensus 323 i~~e~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~l~~Gd~vll~~~G~G~~~~a~llr~~~~~~~~~--~~~~~~~~~ 400 (413)
++++++++|+.++++||||+|+++++.|++..++++.++||++++++||+|+++.+++||+..++.+.+ ..|||.|.|
T Consensus 379 L~~~~le~Sr~vL~r~GN~SSsSV~yvL~~~~~~~~~~~Gdrvl~iaFGpGf~~es~v~~~~~~~~~~~~~~~~~w~~~i 458 (466)
T PLN00415 379 LSEFDLEPSRMTLHRFGNTSSSSLWYELAYVEAKCRVKRGDRVWQLAFGSGFKCNSIVWRALRTIPANESLVGNPWGDSV 458 (466)
T ss_pred CCHHHHHHHHHHHHHhCCchhhhHHHHHHHHHhhccCCCCCEEEEEEEcCcchhhHhHHHHhccCCcccccCCCCchhhH
Confidence 999999999999999999999999999999998899999999999999999999999999999877754 359999999
Q ss_pred ccCCcCC
Q 015082 401 HHFPVDV 407 (413)
Q Consensus 401 ~~~~~~~ 407 (413)
|+|||.+
T Consensus 459 ~~yp~~~ 465 (466)
T PLN00415 459 HKYPVHV 465 (466)
T ss_pred HhCCCCC
Confidence 9999953
No 6
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=100.00 E-value=1.3e-59 Score=451.14 Aligned_cols=312 Identities=21% Similarity=0.304 Sum_probs=261.3
Q ss_pred CceEEEEeeeeecCCCCccccHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCceeecCCcccCCCCCccHHHHHHHHHH
Q 015082 1 MIFGSISNFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDSTYLPEAVLNIPPNPSMKEARKEAEA 80 (413)
Q Consensus 1 ~~~v~I~~ig~~lP~~~~~v~~~el~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~ma~~~~~~~~ 80 (413)
|..++|.++|.|+|+ ++++|+++.+.... ++| ||..++||++||++.++| . ..+
T Consensus 1 ~~~a~i~g~G~~lP~--~~vtn~d~e~~~~t----sde------wI~~rtGir~R~~a~~~e----~----------~s~ 54 (323)
T COG0332 1 MMNAKILGIGSYLPE--RVVTNADLEKRVDT----SDE------WIETRTGIRERRIAADDE----T----------TSD 54 (323)
T ss_pred CCcceEEEEEeecCC--cccChHHHHhccCC----Ccc------eeeeecCCceeeecCCCc----c----------HHH
Confidence 567899999999999 99999999966654 554 999999999999998875 2 346
Q ss_pred HHHHHHHHHHHhCCCCCCCcCeEEEEc-cCCCCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHHcCCC
Q 015082 81 VMFGAIDELFAKTSVKPKDIGILIVNC-SLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPN 159 (413)
Q Consensus 81 la~~Aa~~aL~~ag~~~~~Id~li~~s-~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~~g~~ 159 (413)
|+++|+++||+++|++++|||+||++| +|++.+|++|+.||++||+. ++.+||++ .+|+||+.||.+|..+|++|.+
T Consensus 55 la~~Aa~~AL~~Agi~~~dIDlII~aT~tpd~~~Ps~A~~vq~~LG~~-~~~afDl~-aaCsgf~yaL~~A~~~i~sG~~ 132 (323)
T COG0332 55 LAVEAARKALEDAGISPDDIDLIIVATSTPDHLFPSTACLVQARLGLG-GAPAFDLQ-AACSGFLYALSVADGLIRSGGY 132 (323)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEcCCcccCCChHHHHHHHHhCCC-Ccceeech-hhhHHHHHHHHHHHHHHHcCCC
Confidence 779999999999999999999999996 58999999999999999999 59999999 7999999999999999999999
Q ss_pred CeEEEEEEccccCCCccCCCccchhhhcccccCceEEEEecCCCCcccccceEeeeeeeecCCCCccccccccccCCCCc
Q 015082 160 SYALVISMENITLNWYFGNDRSKLVSNCLFRMGGAAILLSNRFSDRRRSKYRLVHTVRTHKGADDNCFACVTQEEDSEGK 239 (413)
Q Consensus 160 ~~vLVv~~e~~s~~~~~~~d~~~~~~~~lfGDGAaA~ll~~~~~~~~~~~~~i~~~~~~~~~td~~~~~~~~~~~~~~g~ 239 (413)
++||||++|++|+ +.++.||.+ ..+|||||+|+||++.+.. . +++.+.+.+|+++++.++.+......
T Consensus 133 k~vLVVg~e~~S~-~ld~~dR~t---~vlFgDGAgAvvl~~~~~~-----~---~i~~~~l~sdg~~~~~l~~~~~~~~~ 200 (323)
T COG0332 133 KNVLVVGAETLSR-ILDWTDRDT---CVLFGDGAGAVVLEATEDD-----N---GILDTDLGSDGSQGDLLYLPGGGSAT 200 (323)
T ss_pred CEEEEEehhHhhc-cCCHhhccc---eEEEcCCceEEEEecCCCC-----c---CeeeeeeeccccCCCeeeccCCCCcc
Confidence 9999999999999 678899976 4799999999999998733 1 45567778899888766655431110
Q ss_pred eeeEecchhhHHhHHhhhhhhhhcCCCccchhHHHHHHHHHHHHHhhhhccCCC----------ccchhccccEEEecCC
Q 015082 240 VGVTLSKNLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPY----------IPDFKLAFEHFCIHAG 309 (413)
Q Consensus 240 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~al~~~----------~~~~~~did~~i~hq~ 309 (413)
...... ..++.|.|+++|++++..+ .+..++|||||+|||+
T Consensus 201 -----~~~~~~------------------------~~~~~m~Gr~vfk~av~~~~~~~~~~L~~~~l~~~dId~~vpHQa 251 (323)
T COG0332 201 -----PKEESG------------------------GGLLVMDGREVFKFAVRAMPKAIEEVLEKAGLTPEDIDWFVPHQA 251 (323)
T ss_pred -----cccccc------------------------ccceeeccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEccccc
Confidence 000000 0112233333433333221 2334799999999999
Q ss_pred ChHHHHHHHHhcCCCcccchhhHHHHhhhcCCCcchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhhhhhhhhc
Q 015082 310 GRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVWKAL 384 (413)
Q Consensus 310 ~~~~~~~i~~~lgi~~e~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~l~~Gd~vll~~~G~G~~~~a~llr~~ 384 (413)
|.++++.++++||+|++|+ ..++++|||+++||+|++|++++++|++++||+++|.+||+|++||++++||.
T Consensus 252 n~ri~~~i~~~l~~~~~k~---~~~~~~yGNtsaAsiplaL~~~~~~g~ik~Gd~ill~~fG~Gltwg~~~~r~~ 323 (323)
T COG0332 252 NLRIIEAIAKKLGIPEEKV---VVTVDKYGNTSAASIPLALDEALREGRIKPGDLVLLEAFGGGLTWGAALVRWG 323 (323)
T ss_pred cHHHHHHHHHHcCCCHHHH---hhHHHHhcccccchHHHHHHHHhhhCCCCCCCEEEEEeecCcceeeeEEEEeC
Confidence 9999999999999999999 78999999999999999999999999999999999999999999999999984
No 7
>PLN03172 chalcone synthase family protein; Provisional
Probab=100.00 E-value=1e-51 Score=412.41 Aligned_cols=347 Identities=18% Similarity=0.216 Sum_probs=266.1
Q ss_pred eEEEEeeeeecCCCCccccHHHHHHHHHhcCCC-ChhhHH-HHHHHHHHcCCCceeecCCcc----cCC-------CCCc
Q 015082 3 FGSISNFSCYKPEESRKCTKRIFMDQSRMTGTF-TEENLQ-FQKKILERSGLGDSTYLPEAV----LNI-------PPNP 69 (413)
Q Consensus 3 ~v~I~~ig~~lP~~~~~v~~~el~~~~~~~~~~-~~~~~~-~~~~i~~~~GI~~R~~~~~~~----~~~-------~~~~ 69 (413)
+++|.++|+..|+ +.++|+|+.+++...++. +...++ .+++|++++||++||++.+.+ ... ....
T Consensus 16 ~~~I~~igta~P~--~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~~ 93 (393)
T PLN03172 16 PATILAIGKATPA--NCVSQADYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYMHLTEEILKENPNMCAYMAPSLDA 93 (393)
T ss_pred CeEEEEEEecCCC--ccccHHHHHHHHHHHhcccCchHHHHHHHHHHHhcCCCceeEeccchhhhhCccccccCCCCHHH
Confidence 4689999999999 999999999988765421 112233 477899999999999865311 110 1133
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcCeEEEEccCCCCCCChHHHHHHHcCCCCCcce-EEecCccchhHHHHHH
Q 015082 70 SMKEARKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIIS-YNLGGMGCSAGLISID 148 (413)
Q Consensus 70 ~ma~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lGl~~~~~~-~~v~~~~C~~~~~al~ 148 (413)
+|..+.+.+.+|+++|+++||+++|++++|||+||++|+++...|+++.+|+++||+++.+.+ ++++ +||+|++.||+
T Consensus 94 r~~~~~~~a~~La~~Aa~~aL~~ag~~~~dId~ii~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~~~~-~gC~g~~~aL~ 172 (393)
T PLN03172 94 RQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLKPSVKRFMMYQ-QGCFAGGTVLR 172 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCcCchHHHHHHHHhCCCCCceEEeeeC-CchHHHHHHHH
Confidence 577899999999999999999999999999999998875544589999999999999866655 6777 89999999999
Q ss_pred HHHHHHHcCCCCeEEEEEEccccCCCccCCCc--cchhhhcccccCceEEEEecCCCCc-ccccceEeeeeeeec-CCCC
Q 015082 149 LANNLLQVHPNSYALVISMENITLNWYFGNDR--SKLVSNCLFRMGGAAILLSNRFSDR-RRSKYRLVHTVRTHK-GADD 224 (413)
Q Consensus 149 ~A~~~i~~g~~~~vLVv~~e~~s~~~~~~~d~--~~~~~~~lfGDGAaA~ll~~~~~~~-~~~~~~i~~~~~~~~-~td~ 224 (413)
+|..++++++.++||||++|.+|.++.++.|+ .++++..+|||||+|+||++++... .++.|++.+..+..+ .+++
T Consensus 173 ~A~~~~~~~~~~~vLVV~~E~~S~~~~~~~d~~~~~~v~~~LFGDGAaAvVl~~~~~~~~~~~~~~i~~~~~~~~~~t~~ 252 (393)
T PLN03172 173 LAKDLAENNAGSRVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGADPDTKIERPLFEIVSAAQTILPDSDG 252 (393)
T ss_pred HHHHHHHcCCCCeEEEEEEehhhhhhcccccccHHhhhccchhcCceEEEEEecCCCCcccCceeEEeeeccEEecCCcc
Confidence 99999999999999999999999756555553 4556679999999999999865421 123356655432222 3444
Q ss_pred ccccccccccCCCCceeeEecchhhHHhHHhhhhhhhhcCCCccchhHHHHHHHHHHHHHhhhhccCCCccchhccccEE
Q 015082 225 NCFACVTQEEDSEGKVGVTLSKNLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDFKLAFEHF 304 (413)
Q Consensus 225 ~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~al~~~~~~~~~did~~ 304 (413)
.....+.. +++.+.+++++|......+...+ +++++ + .+....||++|
T Consensus 253 ~~~~~i~~-----~G~~~~l~~~vp~~~~~~i~~~~----------------------~~~L~----~-~gl~~~di~~~ 300 (393)
T PLN03172 253 AIDGHLRE-----VGLTFHLLKDVPGLISKNIEKSL----------------------VEAFA----P-IGINDWNSIFW 300 (393)
T ss_pred cccceEEc-----CCcEEEEechHHHHHHHHHHHHH----------------------HHHhh----h-cCCCccccceE
Confidence 32222221 22456677777776443222111 12222 1 11225799999
Q ss_pred EecCCChHHHHHHHHhcCCCcccchhhHHHHhhhcCCCcchHHHHHHHHH----HcCCCCCC---CeEEEEeeccchhhh
Q 015082 305 CIHAGGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSE----AKGRIKKG---DRTWQIAFGSGFKCN 377 (413)
Q Consensus 305 i~hq~~~~~~~~i~~~lgi~~e~~~~s~~~l~~~Gn~~sasi~i~L~~~~----~~g~l~~G---d~vll~~~G~G~~~~ 377 (413)
++||+|+++++.++++||++++++..|+.++++||||+||++|++|++++ ++|++++| |++++++||+|++|+
T Consensus 301 ~~Hqgg~~Il~~v~~~Lgl~~~~~~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~g~~~~G~~~~~~ll~afGpG~t~~ 380 (393)
T PLN03172 301 IAHPGGPAILDQVEIKLDLKEEKLRATRHVLSDYGNMSSACVLFILDEMRKKSIEEGKGSTGEGLEWGVLFGFGPGLTVE 380 (393)
T ss_pred EecCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCccHHhHHHHHHHHHHhhhhhcCCCCCCCCcceEEEEEeCCcceee
Confidence 99999999999999999999999988889999999999999999999987 35777777 889999999999999
Q ss_pred hhhhhhc
Q 015082 378 SAVWKAL 384 (413)
Q Consensus 378 a~llr~~ 384 (413)
+++|||.
T Consensus 381 ~~ll~~~ 387 (393)
T PLN03172 381 TVVLHSV 387 (393)
T ss_pred eeeeEec
Confidence 9999994
No 8
>PLN03168 chalcone synthase; Provisional
Probab=100.00 E-value=2.6e-51 Score=409.56 Aligned_cols=347 Identities=18% Similarity=0.210 Sum_probs=257.8
Q ss_pred eEEEEeeeeecCCCCccccHHHHHHHHHhcCC--CChhhHHHHHHHHHHcCCCceeecCCcc---cCC--------CCCc
Q 015082 3 FGSISNFSCYKPEESRKCTKRIFMDQSRMTGT--FTEENLQFQKKILERSGLGDSTYLPEAV---LNI--------PPNP 69 (413)
Q Consensus 3 ~v~I~~ig~~lP~~~~~v~~~el~~~~~~~~~--~~~~~~~~~~~i~~~~GI~~R~~~~~~~---~~~--------~~~~ 69 (413)
+++|.++|+..|+ +.++|+|+.+++...+. ..+...+++++|++++||++||++.+.+ ... ....
T Consensus 15 ~~~i~~i~ta~P~--~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~ps~~~ 92 (389)
T PLN03168 15 PACVLGIGTAVPP--AEFLQSEYPDFFFNITNCGEKEALKAKFKRICDKSGIRKRHMFLTEEVLKANPGICTYMEPSLNV 92 (389)
T ss_pred CeEEEEEeccCCC--cccCHHHHHHHHHHhccccCcHHHHHHHHHHHHhcCCCeeeeeccccchhhCcccccccCCCHHH
Confidence 4789999999999 99999999998876542 1222234578899999999999865321 110 1134
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcCeEEEEccCCCCCCChHHHHHHHcCCCCCc-ceEEecCccchhHHHHHH
Q 015082 70 SMKEARKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNI-ISYNLGGMGCSAGLISID 148 (413)
Q Consensus 70 ~ma~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lGl~~~~-~~~~v~~~~C~~~~~al~ 148 (413)
+|..|.+.+.+|+++|+++||+++|++++|||+||++|++++..|+++.+|+++||+++.+ .++|++ +||+||+.||+
T Consensus 93 r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r~~d~~-~gC~g~~~aL~ 171 (389)
T PLN03168 93 RHDIVVVQVPKLAAEAAQKAIKEWGGRKSDITHIVFATTSGVNMPGADHALAKLLGLKPTVKRVMMYQ-TGCFGGASVLR 171 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCccHHHHHHHHhCcCCcceeeeeeC-CccHHHHHHHH
Confidence 5778999999999999999999999999999999999765466899999999999998654 389999 79999999999
Q ss_pred HHHHHHHcCCCCeEEEEEEccccCCCccCCC--ccchhhhcccccCceEEEEecCCCCc-ccccceEeeeeeeecC-CCC
Q 015082 149 LANNLLQVHPNSYALVISMENITLNWYFGND--RSKLVSNCLFRMGGAAILLSNRFSDR-RRSKYRLVHTVRTHKG-ADD 224 (413)
Q Consensus 149 ~A~~~i~~g~~~~vLVv~~e~~s~~~~~~~d--~~~~~~~~lfGDGAaA~ll~~~~~~~-~~~~~~i~~~~~~~~~-td~ 224 (413)
+|..++++++.++||||++|.+|.++.+..+ ..++++..+|||||+|+||++++... ..+.+++....+..++ +++
T Consensus 172 ~A~~~i~~~~~~~VLVV~~E~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvvl~~~~~~~~~~~~~~~~~~~~~~~p~s~~ 251 (389)
T PLN03168 172 VAKDLAENNKGARVLAVASEVTAVTYRAPSENHLDGLVGSALFGDGAGVYVVGSDPKPEVEKALFEVHWAGETILPESDG 251 (389)
T ss_pred HHHHHHHhCCCCEEEEEEEehhhhhccCcccccHHHHhccccccCccEEEEEecCCCCccCCcceEEEeeeeEEEcCCCC
Confidence 9999999999999999999999986643322 33445678999999999999865421 1122343322222222 222
Q ss_pred ccccccccccCCCCceeeEecchhhHHhHHhhhhhhhhcCCCccchhHHHHHHHHHHHHHhhhhccCCCccchhccccEE
Q 015082 225 NCFACVTQEEDSEGKVGVTLSKNLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDFKLAFEHF 304 (413)
Q Consensus 225 ~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~al~~~~~~~~~did~~ 304 (413)
. .. .... ..++.+.+++++|....+.+ .++++..+.. .+....|+++|
T Consensus 252 ~-~~-~~~~---~~g~~~~l~~~vp~~i~~~~--------------------------~~~l~~~l~~-~~~~~~d~~~~ 299 (389)
T PLN03168 252 A-ID-GHLT---EAGLIFHLMKDVPGLISKNI--------------------------EKFLNEARKC-VGSPDWNEMFW 299 (389)
T ss_pred c-cC-ceEe---cCceEEEECHHHHHHHHHHH--------------------------HHHHHHHHHh-cCCCccccceE
Confidence 1 00 0000 11123445555554432211 1122222221 11223577899
Q ss_pred EecCCChHHHHHHHHhcCCCcccchhhHHHHhhhcCCCcchHHHHHHHHHHcCCCCCC--------CeEEEEeeccchhh
Q 015082 305 CIHAGGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKG--------DRTWQIAFGSGFKC 376 (413)
Q Consensus 305 i~hq~~~~~~~~i~~~lgi~~e~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~l~~G--------d~vll~~~G~G~~~ 376 (413)
++||+|+++++.++++||++++|+..|+.++++||||+||++|++|++++++ ++++| |++++++||+|++|
T Consensus 300 v~Hqgg~~Il~~v~~~Lgl~~ek~~~s~~vl~~yGNtSSaSv~~vL~~~~~~-~~~~g~~~~~~g~~~~ll~afGpG~t~ 378 (389)
T PLN03168 300 AVHPGGPAILDQVEAKLKLTKDKMQGSRDILSEFGNMSSASVLFVLDQIRQR-SVKMGASTLGEGSEFGFFIGFGPGLTL 378 (389)
T ss_pred EecCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCccHhhhHHHHHHHHHHH-HhhcCCCCCCCCccEEEEEEEcchhhh
Confidence 9999999999999999999999998888899999999999999999998865 55554 89999999999999
Q ss_pred hhhhhhhcc
Q 015082 377 NSAVWKALR 385 (413)
Q Consensus 377 ~a~llr~~~ 385 (413)
++++|||..
T Consensus 379 ~~~llr~~~ 387 (389)
T PLN03168 379 EVLVLRAAA 387 (389)
T ss_pred hhhhheecc
Confidence 999999954
No 9
>PLN03169 chalcone synthase family protein; Provisional
Probab=100.00 E-value=5.9e-51 Score=407.85 Aligned_cols=348 Identities=18% Similarity=0.247 Sum_probs=253.8
Q ss_pred eEEEEeeeeecCCCCccccHHHHHHHHHhcCCCChhhH-HHHHHHHHHcCCCceeecCCcc----cC-------CCCCcc
Q 015082 3 FGSISNFSCYKPEESRKCTKRIFMDQSRMTGTFTEENL-QFQKKILERSGLGDSTYLPEAV----LN-------IPPNPS 70 (413)
Q Consensus 3 ~v~I~~ig~~lP~~~~~v~~~el~~~~~~~~~~~~~~~-~~~~~i~~~~GI~~R~~~~~~~----~~-------~~~~~~ 70 (413)
.++|.++|+++|+ +.++|+|+.+.+......+++.+ +.+++|++++||++||++.+.+ .. .....+
T Consensus 21 ~~~I~gigt~~P~--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~~~~~~~r 98 (391)
T PLN03169 21 KATILALGKAFPS--QLVPQEYLVDGYFRDTKCDDPALKEKLERLCKTTTVKTRYVVMSKEILDKYPELATEGTPTIKQR 98 (391)
T ss_pred CeEEEEEEeeCCC--eecCHHHHHHHHHHHhcccCHHHHHHHHHHHHhCCcceeeEeccccchhhCccccccCCCCHHHH
Confidence 4789999999999 99999999986554221122222 3577899999999999875311 00 001224
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCCCCcCeEEEEccCCCCCCChHHHHHHHcCCCCCc-ceEEecCccchhHHHHHHH
Q 015082 71 MKEARKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNI-ISYNLGGMGCSAGLISIDL 149 (413)
Q Consensus 71 ma~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lGl~~~~-~~~~v~~~~C~~~~~al~~ 149 (413)
+..+.+++.+|+++|+++||+++|++++|||+||++|++++..|+.+..|+++||+++.+ .++|++ +||+|++.||.+
T Consensus 99 ~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~lI~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~d~~-~gC~g~~~aL~~ 177 (391)
T PLN03169 99 LDIANEAVTQMAVEASLACIKEWGRPVSDITHLVYVSSSEARLPGGDLYLAKQLGLSPDVQRVMLYF-LGCSGGVAGLRV 177 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECcCCCCCCcHHHHHHHHhCcCCcceeeeccc-ChhHHHHHHHHH
Confidence 556789999999999999999999999999999999877888999999999999998655 379999 799999999999
Q ss_pred HHHHHHcCCCCeEEEEEEccccCCCccCC-C-ccchhhhcccccCceEEEEecCCCCc-ccccceEeeeeeeecCCCCcc
Q 015082 150 ANNLLQVHPNSYALVISMENITLNWYFGN-D-RSKLVSNCLFRMGGAAILLSNRFSDR-RRSKYRLVHTVRTHKGADDNC 226 (413)
Q Consensus 150 A~~~i~~g~~~~vLVv~~e~~s~~~~~~~-d-~~~~~~~~lfGDGAaA~ll~~~~~~~-~~~~~~i~~~~~~~~~td~~~ 226 (413)
|.+++++++.++||||++|.+|.++.... + ....++..+|||||+|+||++++... ..+.+++.......++.....
T Consensus 178 A~~~~~~~~~~~vLvv~~e~~s~~~~~~~~~~~~d~~~~~lFGDGAaA~vl~~~~~~~~~~~~~~l~~~~~~~ip~~~~~ 257 (391)
T PLN03169 178 AKDIAENNPGSRVLLTTSETTILGFRPPSPDRPYDLVGAALFGDGAAAVIIGADPIPVSESPFFELHTAIQQFLPGTEKT 257 (391)
T ss_pred HHHHHHhCCCCeEEEEEEEcChhhccCCCccchhhhhhhhhccCceEEEEEecCCCcccCCcceEEEeeeeeEcCCCccc
Confidence 99999999999999999999887543221 1 22333468999999999999865421 011233222111111100000
Q ss_pred ccccccccCCCCceeeEecchhhHHhHHhhhhhhhhcCCCccchhHHHHHHHHHHHHHhhhhccCCCccchhcccc--EE
Q 015082 227 FACVTQEEDSEGKVGVTLSKNLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDFKLAFE--HF 304 (413)
Q Consensus 227 ~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~al~~~~~~~~~did--~~ 304 (413)
.+. .. ...++.+.+++++|......+ .++++..+++ .+...+|+| +|
T Consensus 258 ~~~-~~---~~~g~~~~~g~~v~~~~~~~~--------------------------~~~i~~~L~~-~gl~~~did~~~~ 306 (391)
T PLN03169 258 IDG-RL---TEEGINFKLGRELPQKIEDNI--------------------------EGFCKKLMKK-AGLVEKDYNDLFW 306 (391)
T ss_pred cCc-ee---cCCceEEEECcHHHHHHHHHH--------------------------HHHHHHHHHH-cCCCCCCCCcceE
Confidence 000 00 011123344455544322111 1122222222 222346788 99
Q ss_pred EecCCChHHHHHHHHhcCCCcccchhhHHHHhhhcCCCcchHHHHHHHHHHcCCCC---CCCeEEEEeeccchhhhhhhh
Q 015082 305 CIHAGGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIK---KGDRTWQIAFGSGFKCNSAVW 381 (413)
Q Consensus 305 i~hq~~~~~~~~i~~~lgi~~e~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~l~---~Gd~vll~~~G~G~~~~a~ll 381 (413)
++||+|++|++.++++||++++|+..|+.++++||||+||++|++|++++++++++ +||++++++||+|++|++++|
T Consensus 307 v~Hq~n~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtsSasip~~L~~~~~~~~~~~~~~gd~~ll~afG~G~s~~~~ll 386 (391)
T PLN03169 307 AVHPGGPAILNRLEKKLKLAPEKLECSRRALMDYGNVSSNTIVYVLEYMREELKKKGEEDEEWGLILAFGPGITFEGILA 386 (391)
T ss_pred EecCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchHhHHHHHHHHHHHhhcccCCCCCcEEEEEEEcccHhHHHHHH
Confidence 99999999999999999999999987778999999999999999999999888776 699999999999999999999
Q ss_pred hhc
Q 015082 382 KAL 384 (413)
Q Consensus 382 r~~ 384 (413)
||.
T Consensus 387 ~~~ 389 (391)
T PLN03169 387 RNL 389 (391)
T ss_pred hhh
Confidence 984
No 10
>PLN03173 chalcone synthase; Provisional
Probab=100.00 E-value=1.4e-50 Score=404.00 Aligned_cols=348 Identities=19% Similarity=0.196 Sum_probs=262.4
Q ss_pred eEEEEeeeeecCCCCccccHHHHHHHHHhcCC--CChhhHHHHHHHHHHcCCCceeecCCcc----cC--C-----CCCc
Q 015082 3 FGSISNFSCYKPEESRKCTKRIFMDQSRMTGT--FTEENLQFQKKILERSGLGDSTYLPEAV----LN--I-----PPNP 69 (413)
Q Consensus 3 ~v~I~~ig~~lP~~~~~v~~~el~~~~~~~~~--~~~~~~~~~~~i~~~~GI~~R~~~~~~~----~~--~-----~~~~ 69 (413)
+++|.++|+..|+ +.++++|+.+.+...+. ..+...+++++|++++||++||++.+.+ +. . ....
T Consensus 16 ~~~i~~i~ta~P~--~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~~ 93 (391)
T PLN03173 16 PATIMAIGTSTPP--NCVDQSTYPDYYFRITNSEHKVELKEKFKRMCEKSMIKKRYMHLTEEILKENPSVCEYMAPSLDA 93 (391)
T ss_pred CeEEEEEEccCCC--cccCHHHHHHHHHHHhccccchhHHHHHHHHHHhCCCCeeeEeccchhhhhCcccccccCCCHHH
Confidence 4789999999999 99999999999876542 1222334578899999999999865321 11 0 1133
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcCeEEEEccCCCCCCChHHHHHHHcCCCCCcc-eEEecCccchhHHHHHH
Q 015082 70 SMKEARKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNII-SYNLGGMGCSAGLISID 148 (413)
Q Consensus 70 ~ma~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lGl~~~~~-~~~v~~~~C~~~~~al~ 148 (413)
++..|.+.+.+|+++|+++||+++|++++|||+||++|++....|+.+.+|+++||+++.+. +++++ +||+|++.||+
T Consensus 94 r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~~~~-~gC~g~~~aL~ 172 (391)
T PLN03173 94 RQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRSSVKRFMMYQ-QGCFAGGTVLR 172 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCcccHHHHHHHHHhCCCccceeeehhc-CccHHHHHHHH
Confidence 57789999999999999999999999999999999987544448999999999999986664 55667 89999999999
Q ss_pred HHHHHHHcCCCCeEEEEEEccccCCCccCCCc--cchhhhcccccCceEEEEecCCCCc-ccccceEeeeeeeec-CCCC
Q 015082 149 LANNLLQVHPNSYALVISMENITLNWYFGNDR--SKLVSNCLFRMGGAAILLSNRFSDR-RRSKYRLVHTVRTHK-GADD 224 (413)
Q Consensus 149 ~A~~~i~~g~~~~vLVv~~e~~s~~~~~~~d~--~~~~~~~lfGDGAaA~ll~~~~~~~-~~~~~~i~~~~~~~~-~td~ 224 (413)
+|.+++++++.++||||++|.+|.++.+++|+ .++++..+|||||+|+||++++... ..+.|++.+..+..+ .+++
T Consensus 173 ~A~~~~~~~~~~~vLVV~~E~~S~~~~~~~d~~~~~~v~~~LFGDGAaAvvl~~~~~~~~~~~~~~l~~~~~~~~~~t~~ 252 (391)
T PLN03173 173 LAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAIIIGSDPVLGVEKPLFELVSAAQTILPDSDG 252 (391)
T ss_pred HHHHHHHhCCCCeEEEEEEehhhhhhCCccccchhhhhhhhhhcCceEEEEEeCCCCCCcCCcceEEEeeeeEEecCCcc
Confidence 99999999999999999999999656665553 3455678999999999999754321 112345444322222 2333
Q ss_pred ccccccccccCCCCceeeEecchhhHHhHHhhhhhhhhcCCCccchhHHHHHHHHHHHHHhhhhccCCCccchhccccEE
Q 015082 225 NCFACVTQEEDSEGKVGVTLSKNLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDFKLAFEHF 304 (413)
Q Consensus 225 ~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~al~~~~~~~~~did~~ 304 (413)
.....+. . +++.+.+++++|....+.++.. -+++++. .+...+|||+|
T Consensus 253 ~~~~~i~-~----~G~~~~l~~~vp~~~~~~~~~~----------------------i~~~L~~-----~gl~~~di~~~ 300 (391)
T PLN03173 253 AIDGHLR-E----VGLTFHLLKDVPGLISKNVEKS----------------------LTEAFKP-----LGISDWNSLFW 300 (391)
T ss_pred ceeeEEE-c----CceEEEEecHHHHHHHHHHHHH----------------------HHHHHHh-----cCCCccccCeE
Confidence 3221111 1 2235666777766543222111 1223321 12225899999
Q ss_pred EecCCChHHHHHHHHhcCCCcccchhhHHHHhhhcCCCcchHHHHHHHHHHc----CCCCC--C-CeEEEEeeccchhhh
Q 015082 305 CIHAGGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAK----GRIKK--G-DRTWQIAFGSGFKCN 377 (413)
Q Consensus 305 i~hq~~~~~~~~i~~~lgi~~e~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~----g~l~~--G-d~vll~~~G~G~~~~ 377 (413)
++||+|+++++.++++||++++|+..|+.++++||||+||++|++|++++++ +.+++ | +++++++||+|++++
T Consensus 301 v~Hqgg~~Il~~v~~~LgL~~ekl~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~~~~~~g~~~~~~l~~afGpG~t~e 380 (391)
T PLN03173 301 IAHPGGPAILDQVEAKLALKPEKLRATRHVLSEYGNMSSACVLFILDEMRKKSAEDGLKSTGEGLEWGVLFGFGPGLTVE 380 (391)
T ss_pred EECCCcHHHHHHHHHHcCCChHHHHHHHHHHHHhCcchhhHHHHHHHHHHHhhhhcCCCCCCCCcceEEEEEeCchHHHH
Confidence 9999999999999999999999998888999999999999999999999953 44433 3 889999999999999
Q ss_pred hhhhhhcc
Q 015082 378 SAVWKALR 385 (413)
Q Consensus 378 a~llr~~~ 385 (413)
++++||..
T Consensus 381 ~~ll~~~~ 388 (391)
T PLN03173 381 TVVLHSVA 388 (391)
T ss_pred HHHHhhcc
Confidence 99999965
No 11
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=100.00 E-value=1.2e-50 Score=403.42 Aligned_cols=344 Identities=40% Similarity=0.593 Sum_probs=260.1
Q ss_pred EEEEeeeeecCCCCccccHHHHHHHHHhcCCC--ChhhHHHHHHHHHHcCCCceeecCC--cccC-------CCCCccHH
Q 015082 4 GSISNFSCYKPEESRKCTKRIFMDQSRMTGTF--TEENLQFQKKILERSGLGDSTYLPE--AVLN-------IPPNPSMK 72 (413)
Q Consensus 4 v~I~~ig~~lP~~~~~v~~~el~~~~~~~~~~--~~~~~~~~~~i~~~~GI~~R~~~~~--~~~~-------~~~~~~ma 72 (413)
++|.++++|+|+ +.++|+++.+.+.....- .+...+.+++|++++||++||++.+ ++.. .....+++
T Consensus 2 ~~I~~~~~~~P~--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gI~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (361)
T cd00831 2 ATILAIGTAVPP--HRVPQSELVDFYRRLFSSDHLPELKEKLKRLCAKTGIETRYLVLPGGEETYAPRPEMSPSLDERND 79 (361)
T ss_pred cEEEEEEEeCCC--CcCCHHHhhHHHHhcCChhhhHHHHHHHHHHHhhcceeEEEEEecCchhhcCCccccCCCcCcchh
Confidence 689999999999 999999999988753210 1223445679999999999999876 3211 11234567
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCCcCeEEEEccCCCCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHH
Q 015082 73 EARKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANN 152 (413)
Q Consensus 73 ~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~ 152 (413)
.+.+++.+|+.+|+++||+++|+++++||+||++|++++..|+++..|+++||+++++.++|++++||+|++.||++|.+
T Consensus 80 ~~~~~~~~la~~Aa~~aL~~a~~~~~~Id~li~~s~~~~~~P~~a~~i~~~lgl~~~~~~~dv~~~~C~~~~~al~~A~~ 159 (361)
T cd00831 80 IALEEARELAEEAARGALDEAGLRPSDIDHLVVNTSTGNPTPSLDAMLINRLGLRPDVKRYNLGGMGCSAGAIALDLAKD 159 (361)
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhCCCcccchhccccccchhHHHHHHHHHH
Confidence 88999999999999999999999999999999997666789999999999999986799999986699999999999999
Q ss_pred HHHcCCCCeEEEEEEccccCCCccCCC-ccchhhhcccccCceEEEEecCCCCcc--cccceEeeeeeeecCCCCccccc
Q 015082 153 LLQVHPNSYALVISMENITLNWYFGND-RSKLVSNCLFRMGGAAILLSNRFSDRR--RSKYRLVHTVRTHKGADDNCFAC 229 (413)
Q Consensus 153 ~i~~g~~~~vLVv~~e~~s~~~~~~~d-~~~~~~~~lfGDGAaA~ll~~~~~~~~--~~~~~i~~~~~~~~~td~~~~~~ 229 (413)
++++++.++||||++|.+|. +.++.| +.+.++..+|||||+|+||++++.... ...+++.+......+ ++ .+.
T Consensus 160 ~~~~~~~~~aLvv~~e~~s~-~~~~~d~~~~~~~~~lfGDgaaA~ll~~~~~~~~~~~~~~~~~~~~~~~~p-~~--~~~ 235 (361)
T cd00831 160 LLEANPGARVLVVSTELCSL-WYRGPDHRSMLVGNALFGDGAAAVLLSNDPRDRRRERPLFELVRAASTLLP-DS--EDA 235 (361)
T ss_pred HHHHCCCCEEEEEEeecccc-eeCCCCcHHHhhhhhhccCCceEEEEEcCCCcccccccceeeecccceeee-cC--CCc
Confidence 99999999999999999998 456666 665556789999999999998765310 112333322111111 10 000
Q ss_pred cccccCCCCceeeEecchhhHHhHHhhhhhhhhcCCCccchhHHHHHHHHHHHHHhhhhccCCCc--cchhccccEEEec
Q 015082 230 VTQEEDSEGKVGVTLSKNLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYI--PDFKLAFEHFCIH 307 (413)
Q Consensus 230 ~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~al~~~~--~~~~~did~~i~h 307 (413)
+..... .....+.++++++... .....++++..+++ . +...+|||+|++|
T Consensus 236 ~~~~~~-~~~~~~~~~~~v~~~~--------------------------~~~~~~~i~~~L~~-~~~g~~~~did~~~~H 287 (361)
T cd00831 236 MGWHLG-EEGLTFVLSRDVPRLV--------------------------EKNLERVLRKLLAR-LGIGLFKLAFDHWCVH 287 (361)
T ss_pred eEEEEE-cceEEEEeChhHHHHH--------------------------HHHHHHHHHHHhcc-ccCCCccccceEEEEC
Confidence 000000 0011122222222110 00112233334433 2 3446899999999
Q ss_pred CCChHHHHHHHHhcCCCcccchhhHHHHhhhcCCCcchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhhhhhh
Q 015082 308 AGGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVW 381 (413)
Q Consensus 308 q~~~~~~~~i~~~lgi~~e~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~l~~Gd~vll~~~G~G~~~~a~ll 381 (413)
|+|+++++.+++.||++++|+..|+.++++|||++|||+|++|++++++|++++||+|++++||+|++|+++++
T Consensus 288 ~~~~~i~~~v~~~lgl~~~~~~~s~~~l~~~GN~~sasi~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~l~ 361 (361)
T cd00831 288 PGGRAVLDAVEKALGLSPEDLEASRMVLRRYGNMSSSSVLYVLAYMEAKGRVKRGDRGLLIAFGPGFTCESAVW 361 (361)
T ss_pred CCChHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhccHHHHHHHHHHhCCCCCCCEEEEEEEcCCceeeeeeC
Confidence 99999999999999999999987789999999999999999999999999999999999999999999999875
No 12
>PLN03170 chalcone synthase; Provisional
Probab=100.00 E-value=1.3e-50 Score=405.69 Aligned_cols=352 Identities=18% Similarity=0.211 Sum_probs=263.3
Q ss_pred eEEEEeeeeecCCCCccccHHHHHHHHHhcCCC-ChhhH-HHHHHHHHHcCCCceeecCCcc---cC-C-------CCCc
Q 015082 3 FGSISNFSCYKPEESRKCTKRIFMDQSRMTGTF-TEENL-QFQKKILERSGLGDSTYLPEAV---LN-I-------PPNP 69 (413)
Q Consensus 3 ~v~I~~ig~~lP~~~~~v~~~el~~~~~~~~~~-~~~~~-~~~~~i~~~~GI~~R~~~~~~~---~~-~-------~~~~ 69 (413)
+++|.+||+..|+ +.++++|+.+++...+.. +...+ +++++|++++||++||++.+++ .. . ....
T Consensus 20 ~~~i~~i~ta~P~--~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~~ 97 (401)
T PLN03170 20 PATVLAIGTATPA--NCVHQADYPDYYFRITKSEHMTELKEKFKRMCDKSQIRKRYMHLTEEYLAENPNMCAYMAPSLDA 97 (401)
T ss_pred CeEEEEEeecCCC--ccccHHHHHHHHHHHccccCchhHHHHHHHHHHhCCCCceeEeccccchhhCccccccCCCCHHH
Confidence 4789999999999 999999999998875421 11223 3578899999999999865321 11 0 1133
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcCeEEEEccCCCCCCChHHHHHHHcCCCCCc-ceEEecCccchhHHHHHH
Q 015082 70 SMKEARKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNI-ISYNLGGMGCSAGLISID 148 (413)
Q Consensus 70 ~ma~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lGl~~~~-~~~~v~~~~C~~~~~al~ 148 (413)
+|..+.+.+.+|+++|+++||+++|++++|||+||++|+++...|+++.+|+++||+++.+ .+++++ +||+|++.||+
T Consensus 98 r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r~~d~~-~gC~G~~~aL~ 176 (401)
T PLN03170 98 RQDIVVVEVPKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVNRLMMYQ-QGCFAGGTVLR 176 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCCCChHHHHHHHHhCcCcccHHHHhhc-ChhHHHHHHHH
Confidence 5778999999999999999999999999999999998765445999999999999998654 478999 79999999999
Q ss_pred HHHHHHHcCCCCeEEEEEEccccCCCccCCC--ccchhhhcccccCceEEEEecCCCCc-ccccceEeeeeeeecCCCCc
Q 015082 149 LANNLLQVHPNSYALVISMENITLNWYFGND--RSKLVSNCLFRMGGAAILLSNRFSDR-RRSKYRLVHTVRTHKGADDN 225 (413)
Q Consensus 149 ~A~~~i~~g~~~~vLVv~~e~~s~~~~~~~d--~~~~~~~~lfGDGAaA~ll~~~~~~~-~~~~~~i~~~~~~~~~td~~ 225 (413)
+|.+++++++.++||||++|.+|.++.++.+ ..+.++..+|||||+|+||++++... ..+.|++....+..++ +++
T Consensus 177 ~A~~l~~~~~~~~vLVV~~E~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvVl~~~~~~~~~~~~~~l~~~~~~~~p-~~~ 255 (401)
T PLN03170 177 VAKDLAENNRGARVLVVCSEITAVTFRGPSESHLDSMVGQALFGDGAAAVIVGADPDERVERPLFQLVSASQTILP-DSE 255 (401)
T ss_pred HHHHHHHcCCCCeEEEEEEehhhhccCCcccchhhhhhhhhhhhceeEEEEEecCCcccccCCceEEeeccceEec-CCc
Confidence 9999999999999999999999986644432 23445568999999999999865421 1112444332111111 111
Q ss_pred cccccccccCCCCceeeEecchhhHHhHHhhhhhhhhcCCCccchhHHHHHHHHHHHHHhhhhccCCCccchhccccEEE
Q 015082 226 CFACVTQEEDSEGKVGVTLSKNLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDFKLAFEHFC 305 (413)
Q Consensus 226 ~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~al~~~~~~~~~did~~i 305 (413)
.. +.+.-.+.++.+.+++++|....+.+. ++++..+++ .+...+|+++|+
T Consensus 256 ~~---~~~~i~~~G~~~~l~~~vp~~~~~~i~--------------------------~~v~~~L~~-~gl~~~di~~~v 305 (401)
T PLN03170 256 GA---IDGHLREVGLTFHLLKDVPGLISKNIE--------------------------RSLEEAFKP-LGITDYNSIFWV 305 (401)
T ss_pred cc---ccceEEcCCeEEEEehHHHHHHHHHHH--------------------------HHHHHHHHh-cCCCccccCeEE
Confidence 11 001001112345556666654332221 112222222 122257899999
Q ss_pred ecCCChHHHHHHHHhcCCCcccchhhHHHHhhhcCCCcchHHHHHHHHH----HcCCCCCC---CeEEEEeeccchhhhh
Q 015082 306 IHAGGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSE----AKGRIKKG---DRTWQIAFGSGFKCNS 378 (413)
Q Consensus 306 ~hq~~~~~~~~i~~~lgi~~e~~~~s~~~l~~~Gn~~sasi~i~L~~~~----~~g~l~~G---d~vll~~~G~G~~~~a 378 (413)
+||+|+++++.+++.||++++|+..|+.++++||||+||++|++|++++ ++|++++| |++++++||+|++|++
T Consensus 306 ~Hqgg~~il~~v~~~Lgl~~~~~~~s~~~l~~~GNtsSasv~~vL~~~~~~~~~~g~~~~G~~~~~~ll~afGpG~t~~~ 385 (401)
T PLN03170 306 AHPGGPAILDQVEAKVGLEKERMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQATTGEGFDWGVLFGFGPGLTVET 385 (401)
T ss_pred ecCCcHHHHHHHHHHcCCChHHHHHHHHHHHHhCccHHhHHHHHHHHHHHhHhhcCCCCCCCCccEEEEEEeCchHhHHh
Confidence 9999999999999999999999988889999999999999999999987 46888888 8999999999999999
Q ss_pred hhhhhccccC
Q 015082 379 AVWKALRSIN 388 (413)
Q Consensus 379 ~llr~~~~~~ 388 (413)
++|||....+
T Consensus 386 ~ll~~~~~~~ 395 (401)
T PLN03170 386 VVLHSVPITT 395 (401)
T ss_pred HHheeccccc
Confidence 9999955433
No 13
>PLN03171 chalcone synthase-like protein; Provisional
Probab=100.00 E-value=1.7e-49 Score=398.03 Aligned_cols=345 Identities=18% Similarity=0.225 Sum_probs=253.8
Q ss_pred EEEEeeeeecCCCCccccHHHHHHHHHhcC---CCChhhHHHHHHHHHHcCCCceeecCCcc----c-------CCCCCc
Q 015082 4 GSISNFSCYKPEESRKCTKRIFMDQSRMTG---TFTEENLQFQKKILERSGLGDSTYLPEAV----L-------NIPPNP 69 (413)
Q Consensus 4 v~I~~ig~~lP~~~~~v~~~el~~~~~~~~---~~~~~~~~~~~~i~~~~GI~~R~~~~~~~----~-------~~~~~~ 69 (413)
++|.|+|+|+|+ ++++|+++.+.+.... .+ ++..+.+++|++++||++||++.+++ . ......
T Consensus 23 ~~I~gigt~~P~--~~v~n~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (399)
T PLN03171 23 AAVLAIGTANPA--NCVPQDEFPDFYFRATKSDHL-TALKDKFKRICQELGVQKRYLHHTEELLSAHPEFLDHDAPSLDA 99 (399)
T ss_pred cEEEEEEeeCCC--cccCHHHHHHHHHHHhccccc-HHHHHHHHHHHHhcCCCceeEeccccccccCccccccCCCCHHH
Confidence 689999999999 9999999999854311 11 11223567999999999999986542 0 001234
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcCeEEEEcc-CCCCCCChHHHHHHHcCCCCCcc-eEEecCccchhHHHHH
Q 015082 70 SMKEARKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNII-SYNLGGMGCSAGLISI 147 (413)
Q Consensus 70 ~ma~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~-~~~~~p~~a~~v~~~lGl~~~~~-~~~v~~~~C~~~~~al 147 (413)
+|..|.+.+.+|+++|+++||+++|++++|||+||++|+ +++ .|+++.+|+++||+++.+. ++++. +||+|++.||
T Consensus 100 r~~~~~~~a~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~-~P~~a~~v~~~LGl~~~~~~~~~~~-~gC~g~~~aL 177 (399)
T PLN03171 100 RLDIAADAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAH-IPGVDFRLVPLLGLRPSVRRTMLHL-NGCFAGAAAL 177 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCC-CCchHHHHHHHhCCCcccceeeccC-CccHHHHHHH
Confidence 577899999999999999999999999999999999975 554 8999999999999985443 56777 7999999999
Q ss_pred HHHHHHHHcCCCCeEEEEEEccccCCCccCCCc---cchhhhcccccCceEEEEecCCCCcccccceEeeeeeeecCCCC
Q 015082 148 DLANNLLQVHPNSYALVISMENITLNWYFGNDR---SKLVSNCLFRMGGAAILLSNRFSDRRRSKYRLVHTVRTHKGADD 224 (413)
Q Consensus 148 ~~A~~~i~~g~~~~vLVv~~e~~s~~~~~~~d~---~~~~~~~lfGDGAaA~ll~~~~~~~~~~~~~i~~~~~~~~~td~ 224 (413)
++|.+++++++.++||||++|.+|.. .++.|+ .++++..+|||||+|+||+++++...++.+++...... +++
T Consensus 178 ~~A~~li~~~~~~~vLVv~~e~~s~~-~~~~d~~~~~~~v~~~LFGDGAaA~vl~~~~~~~~~~~~~l~~~~~~---~~p 253 (399)
T PLN03171 178 RLAKDLAENNRGARVLVVAAEITLLL-FNGPDEGCFQTLLNQGLFGDGAAAVIVGADADAAERPLFEIVSAAQA---IIP 253 (399)
T ss_pred HHHHHHHHhCCCCeEEEEEEeccccc-cCCCCcccHHhhhccccccCccEEEEEecCCCCCCCCceEEEEeeeE---Eec
Confidence 99999999999999999999999984 444444 23445689999999999998664211123455433222 233
Q ss_pred ccccccccccCCCCceeeEec-chhhHHhHHhhhhhhhhcCCCccchhHHHHHHHHHHHHHhhhhccCCC----ccchhc
Q 015082 225 NCFACVTQEEDSEGKVGVTLS-KNLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPY----IPDFKL 299 (413)
Q Consensus 225 ~~~~~~~~~~~~~g~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~al~~~----~~~~~~ 299 (413)
...+.+..... .+++.+.+. +.+|....+.+ +++++..+.+. .+...+
T Consensus 254 ~~~~~~~~~~~-~~g~~~~~~~~~vp~~i~~~l--------------------------~~~l~~~l~~~~~~~~g~~~~ 306 (399)
T PLN03171 254 ESDDAINMHFT-EGGLDGNIGTRQVPGLIGDNI--------------------------ERCLLDAFAPLLGGDGGAEWN 306 (399)
T ss_pred CCchheEEEEE-cCCceEEECchhHHHHHHHHH--------------------------HHHHHHHHHhhcccccCCCcc
Confidence 32232222100 111222333 33443322111 11222111110 112357
Q ss_pred cccEEEecCCChHHHHHHHHhcCCCcccchhhHHHHhhhcCCCcchHHHHHHHHHHcCC--CCCC---CeEEEEeeccch
Q 015082 300 AFEHFCIHAGGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGR--IKKG---DRTWQIAFGSGF 374 (413)
Q Consensus 300 did~~i~hq~~~~~~~~i~~~lgi~~e~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~--l~~G---d~vll~~~G~G~ 374 (413)
|++|+ +||+|+++++.++++||++++|+..|+.++++||||+|||+|++|++++++++ +++| |++++++||+|+
T Consensus 307 di~~~-~Hq~~~~il~~v~~~Lgl~~ek~~~s~~~l~~yGNtssaSip~~L~~~~~~~~~~~~~G~~~d~vll~~fG~Gl 385 (399)
T PLN03171 307 DLFWA-VHPGSSAILDQVDAALGLEPEKLAASRRVLSDYGNMFGATVIFALDELRRQMEEAAAAGAWPELGVMMAFGPGL 385 (399)
T ss_pred cceEE-EcCCcHHHHHHHHHHcCCCHHHhHHHHHHHHHhCcchhhhHHHHHHHHHhhHhhcCCCCCCcceEEEEEEcccH
Confidence 88876 69999999999999999999999777789999999999999999999998764 6788 999999999999
Q ss_pred hhhhhhhhhcc
Q 015082 375 KCNSAVWKALR 385 (413)
Q Consensus 375 ~~~a~llr~~~ 385 (413)
+|++++|+|.+
T Consensus 386 t~~~~ll~~~~ 396 (399)
T PLN03171 386 TVDAMLLHASG 396 (399)
T ss_pred HHHHHHhhccc
Confidence 99999999975
No 14
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=100.00 E-value=2.1e-50 Score=396.49 Aligned_cols=323 Identities=14% Similarity=0.201 Sum_probs=248.1
Q ss_pred eEEEEeeeeecCCCCccccHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCceeecCCcccCCCCCccHHHHHHHHHHHH
Q 015082 3 FGSISNFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDSTYLPEAVLNIPPNPSMKEARKEAEAVM 82 (413)
Q Consensus 3 ~v~I~~ig~~lP~~~~~v~~~el~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~ma~~~~~~~~la 82 (413)
.++|.++|+|+|+ ++++|+|+.+.++. +++ ++.+++||++||++.+++ + +.+|+
T Consensus 3 ~~~I~~~g~~lP~--~~v~~~~~~~~~~~----~~~------~i~~~~Gi~~r~~~~~~e----~----------~~~la 56 (326)
T PRK05963 3 SSRIAGFGHAVPD--RRVENAEIEAQLGL----ETG------WIERRTGIRCRRWAAPDE----T----------LSDLA 56 (326)
T ss_pred ccEEEEEEEECCC--CeecHHHHHHHcCC----CHH------HhhhccCCeEEEEcCCCC----C----------HHHHH
Confidence 5799999999999 99999999987753 333 788999999999987764 2 45777
Q ss_pred HHHHHHHHHhCCCCCCCcCeEEEEc-cCCCCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHHcCCCCe
Q 015082 83 FGAIDELFAKTSVKPKDIGILIVNC-SLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSY 161 (413)
Q Consensus 83 ~~Aa~~aL~~ag~~~~~Id~li~~s-~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~~g~~~~ 161 (413)
++|+++||+++|++++|||+||++| ++++..|+.+.+|+++||++ ++.++|++ ++|+|+++||++|.++++++ .++
T Consensus 57 ~~Aa~~aL~~ag~~~~~Id~li~~t~~~d~~~p~~a~~v~~~Lg~~-~~~~~di~-~~C~g~~~aL~~A~~~l~~~-~~~ 133 (326)
T PRK05963 57 ASAGDMALSDAGIERSDIALTLLATSTPDHLLPPSAPLLAHRLGLQ-NSGAIDLA-GACAGFLYALVLADGFVRAQ-GKP 133 (326)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCcHHHHHHHHhCCC-CCceeecc-chhhHHHHHHHHHHHHHHcC-CCe
Confidence 9999999999999999999999986 47888999999999999998 68999999 69999999999999999998 599
Q ss_pred EEEEEEccccCCCccCCCccchhhhcccccCceEEEEecCCCCcccccceEeeeeeeecCCCCccccccccccCCCCcee
Q 015082 162 ALVISMENITLNWYFGNDRSKLVSNCLFRMGGAAILLSNRFSDRRRSKYRLVHTVRTHKGADDNCFACVTQEEDSEGKVG 241 (413)
Q Consensus 162 vLVv~~e~~s~~~~~~~d~~~~~~~~lfGDGAaA~ll~~~~~~~~~~~~~i~~~~~~~~~td~~~~~~~~~~~~~~g~~~ 241 (413)
||||++|.++. +.++.++.+ ..+|||||+|+||++++... .. ++...+.+++++++.+..+.++..
T Consensus 134 aLVv~~d~~s~-~~~~~~~~~---~~lfGDgA~A~ll~~~~~~~----~~---~l~~~~~t~~~~~~~~~~~~gg~~--- 199 (326)
T PRK05963 134 VLVVAANILSR-RINMAERAS---AVLFADAAGAVVLAPSAKAN----SG---VLGSQLISDGSHYDLIKIPAGGSA--- 199 (326)
T ss_pred EEEEEechhhc-cCCccccCc---eEEEeecceEEEEEecCCCC----Cc---eEEEEEEEcCCCCCeEEeCCCCcC---
Confidence 99999999887 445556543 47999999999999876431 12 233445667777776655543110
Q ss_pred eEecchhhHHhHHhhhhhhhhcCCCccchhHHHHHHHHHHHHHhhhhccCCCccchhccccEEEecCCChHHHHHHHHhc
Q 015082 242 VTLSKNLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNL 321 (413)
Q Consensus 242 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~al~~~~~~~~~did~~i~hq~~~~~~~~i~~~l 321 (413)
.+.+.+.... ...+. +. .+ ...+..+.... .+.++.++++ .+...+|||+|++||+|+++++.+++.|
T Consensus 200 ~~~~~~~~~~-~~~~~--~~-~~------~~~~~~~~~~~-~~~~~~~L~~-~gl~~~did~~~~h~~~~~~~~~~~~~l 267 (326)
T PRK05963 200 RPFAPERDAS-EFLMT--MQ-DG------RAVFTEAVRMM-SGASQNVLAS-AAMTPQDIDRFFPHQANARIVDKVCETI 267 (326)
T ss_pred CCCccccccc-ccceE--ec-CC------HHHHHHHHHHH-HHHHHHHHHH-cCCCHHHCCEEEeCCCCHHHHHHHHHHc
Confidence 0111000000 00000 00 00 00111111111 1223333333 3344789999999999999999999999
Q ss_pred CCCcccchhhHHHHhhhcCCCcchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhhhhhhhh
Q 015082 322 QLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVWKA 383 (413)
Q Consensus 322 gi~~e~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~l~~Gd~vll~~~G~G~~~~a~llr~ 383 (413)
|++++|+ ..++++|||+++|++|++|+++++++++++||+|++++||+|++|++++|||
T Consensus 268 ~l~~~k~---~~~l~~~Gn~~sas~~~~L~~~~~~~~~~~Gd~vll~~~G~G~~~~~~ll~~ 326 (326)
T PRK05963 268 GIPRAKA---ASTLETYGNSSAATIPLSLSLANLEQPLREGERLLFAAAGAGMTGGAVVMRV 326 (326)
T ss_pred CCCHHHh---hhhHHhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEEEehhhhheeeEEeC
Confidence 9999998 6899999999999999999999999999999999999999999999999987
No 15
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=1.2e-49 Score=393.72 Aligned_cols=330 Identities=18% Similarity=0.180 Sum_probs=243.1
Q ss_pred eEEEEeeeeecCCCCccccHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCceeecCCcccCCCCCccHHHHHHHHHHHH
Q 015082 3 FGSISNFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDSTYLPEAVLNIPPNPSMKEARKEAEAVM 82 (413)
Q Consensus 3 ~v~I~~ig~~lP~~~~~v~~~el~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~ma~~~~~~~~la 82 (413)
.++|.++|+|+|+ ++++|+++.+.+.. ++. ...+++.+++||++||++.+++ + +.+|+
T Consensus 7 ~~~I~~~g~~lP~--~~v~~~~~~~~~~~----~~~--~~~~~i~~~~Gi~~R~~~~~~e----~----------~~~la 64 (353)
T PRK12880 7 KAKISGICVSVPE--HKICIDDELESVFS----NDI--KTLKRMKKVIGLNTRYICDENT----C----------VSDLG 64 (353)
T ss_pred ccEEEEEEEECCC--eEecHHHHHHHhcC----cch--hhhhhhhhccCceEEEeCCCCC----C----------HHHHH
Confidence 4799999999999 99999976543321 111 1235788899999999987654 2 46788
Q ss_pred HHHHHHHHHhCCCCCCCcCeEEEEc-cCCCCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHHcCCCCe
Q 015082 83 FGAIDELFAKTSVKPKDIGILIVNC-SLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSY 161 (413)
Q Consensus 83 ~~Aa~~aL~~ag~~~~~Id~li~~s-~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~~g~~~~ 161 (413)
++|+++||+++|++++|||.||++| ++++..|+++..|+++||+++++.+||++ +||+|++.||++|..++++|+.+
T Consensus 65 ~~Aa~~aL~~a~~~~~dId~lI~~t~t~d~~~P~~a~~v~~~Lg~~~~~~~~di~-~~C~g~~~aL~~A~~~i~~~~~~- 142 (353)
T PRK12880 65 KHAANTLLQGLNIDKNSLDALIVVTQSPDFFMPSTACYLHQLLNLSSKTIAFDLG-QACAGYLYGLFVAHSLIQSGLGK- 142 (353)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCCceEEehh-hhhHHHHHHHHHHHHHHHcCCCC-
Confidence 9999999999999999999999996 57999999999999999998788999998 79999999999999999999988
Q ss_pred EEEEEEccccCCCccCCCccchhhhcccccCceEEEEecCCCCcccccceEeeeeeeecCCCCccccccccccCCCCcee
Q 015082 162 ALVISMENITLNWYFGNDRSKLVSNCLFRMGGAAILLSNRFSDRRRSKYRLVHTVRTHKGADDNCFACVTQEEDSEGKVG 241 (413)
Q Consensus 162 vLVv~~e~~s~~~~~~~d~~~~~~~~lfGDGAaA~ll~~~~~~~~~~~~~i~~~~~~~~~td~~~~~~~~~~~~~~g~~~ 241 (413)
||||++|.+|. +.++.|+.. ..+|||||+|+||+++++.. .+ ..+.+++++++.+..|.++.....
T Consensus 143 ~LVv~~e~~S~-~~~~~d~~~---~~lFGDGAaA~vl~~~~~~~--------~~--~~~~~~~~~~~~~~~p~g~~~~~~ 208 (353)
T PRK12880 143 ILLICGDTLSK-FIHPKNMNL---APIFGDGVSATLIEKTDFNE--------AF--FELGSDGKYFDKLIIPKGAMRIPK 208 (353)
T ss_pred EEEEEehhhhc-cCCcccCCc---eeeecccceEEEEEecCCCC--------ce--EEEEecCCCCCeEEecCCCcCCCc
Confidence 99999999998 456666643 47999999999999765421 11 123567777777776654211001
Q ss_pred eEecc-h-hhHHh-HHhhhhhhhhcCCCccchhHHHHHHHHHHHHHhhhhccCCCccchhccccEEEecCCChHHHHHHH
Q 015082 242 VTLSK-N-LMAVA-GDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELE 318 (413)
Q Consensus 242 ~~l~~-~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~al~~~~~~~~~did~~i~hq~~~~~~~~i~ 318 (413)
+.... + .+... .+.. ..+...|+ .-+...+.. -.++++..+++ .+...+|||+|++||+|+++++.++
T Consensus 209 ~~~~~~~~~~~~~~~~~~-~~~~~~g~------~v~~~~~~~-~~~~i~~~L~~-~gl~~~did~~v~HQ~~~~i~~~i~ 279 (353)
T PRK12880 209 ADIFNDDSLMQTEEFRQL-ENLYMDGA------NIFNMALEC-EPKSFKEILEF-SKVDEKDIAFHLFHQSNAYLVDCIK 279 (353)
T ss_pred cccccccccccccccccC-ceEEEcCH------HHHHHHHHH-HHHHHHHHHHH-cCCCHHHCCEEEECCCCHHHHHHHH
Confidence 10000 0 00000 0000 00000000 001111111 11233333332 3344689999999999999999999
Q ss_pred HhcCCCcccchhhHHHHhhhcCCCcchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhhhhhhhhcc
Q 015082 319 KNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVWKALR 385 (413)
Q Consensus 319 ~~lgi~~e~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~l~~Gd~vll~~~G~G~~~~a~llr~~~ 385 (413)
++||++++|+. ..++++|||++|||+|++|++++++++++ ++|++||+|++|+++++||.+
T Consensus 280 ~~Lgl~~ek~~--~~~l~~~GNtssasip~~L~~~~~~~~~~----~ll~~~G~G~s~g~~ll~~~~ 340 (353)
T PRK12880 280 EELKLNDDKVP--NFIMEKYANLSACSLPALLCELDTPKEFK----ASLSAFGAGLSWGSAVLNFKD 340 (353)
T ss_pred HHhCCCHHHhh--hhhHHhhCCHHHHHHHHHHHHHHHcCCcE----EEEEEEchhhhheEeEEEECC
Confidence 99999999982 35689999999999999999999887764 999999999999999999965
No 16
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=5.9e-49 Score=362.38 Aligned_cols=346 Identities=23% Similarity=0.296 Sum_probs=281.0
Q ss_pred EEEEeeeeecCCCCccccHHHHHHHHHhcCCCChhhHHHHHHHHH-HcCCCceeecCCcccCCCC---CccHHHHHHHHH
Q 015082 4 GSISNFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILE-RSGLGDSTYLPEAVLNIPP---NPSMKEARKEAE 79 (413)
Q Consensus 4 v~I~~ig~~lP~~~~~v~~~el~~~~~~~~~~~~~~~~~~~~i~~-~~GI~~R~~~~~~~~~~~~---~~~ma~~~~~~~ 79 (413)
.+|.++++++|+ +.+.|.|+.+.+..... .+..+.+.+.+. +.+|++|++..|.+++.++ ...+..|.|++.
T Consensus 2 a~i~sv~t~~Pp--y~~~Qse~~d~f~~~~~--~~~~~~I~r~l~~~~~i~~R~~v~Pl~~y~e~~~f~ekN~ifie~a~ 77 (356)
T COG3424 2 AVIASVATALPP--YRYNQSEITDSFAELPF--QEGREDIPRVLHANAQINRRHLVLPLDWYREPHGFGEKNEIFIEEAV 77 (356)
T ss_pred ceeeecccCCCc--cccchHHHHHHHHHhcc--ccchHHHHHHHhhccccccceecccHhhccCCCChhhhhhhHHHHHH
Confidence 479999999999 99999999988775432 223444445444 8899999998887765333 224567899999
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCeEEEEccCCCCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHHcCCC
Q 015082 80 AVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPN 159 (413)
Q Consensus 80 ~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~~g~~ 159 (413)
+|+++|+++||+.+++.++|||+|+++|+++...|++..+|.++||++|++..+.++++||+++..+|..|+.++++.|.
T Consensus 78 ~l~v~a~r~aL~~~~l~pedId~vv~vtsTG~~~Ps~dari~~~Lgl~p~~~Rvpv~glGCaaga~glara~~y~ra~P~ 157 (356)
T COG3424 78 PLGVDALRRALDGSPLRPEDIDAVVTVTSTGLATPSLDARIVGELGLSPDTRRVPVWGLGCAAGAAGLARARDYCRAAPD 157 (356)
T ss_pred HHHHHHHHHHhccCCCCHHHCcEEEEEeeccccCCChhHHHHhhcCCCCccceeeeecchhhhhhhHHHHHHHHHhhCcc
Confidence 99999999999999999999999999998888899999999999999999999999999999999999999999999999
Q ss_pred CeEEEEEEccccCCCccCCCcc-chhhhcccccCceEEEEecCCCC--cccccceEeeeeeeecCCCCccccccccccCC
Q 015082 160 SYALVISMENITLNWYFGNDRS-KLVSNCLFRMGGAAILLSNRFSD--RRRSKYRLVHTVRTHKGADDNCFACVTQEEDS 236 (413)
Q Consensus 160 ~~vLVv~~e~~s~~~~~~~d~~-~~~~~~lfGDGAaA~ll~~~~~~--~~~~~~~i~~~~~~~~~td~~~~~~~~~~~~~ 236 (413)
.+||||+.|.||.+++..++.. ++++.++|||||||+|++.+... ..+..+.+.+..++ ..-|++ ..+.|+=.
T Consensus 158 ~~vlvV~vELCSLt~~~~d~t~s~lVgtaLF~DG~AA~vv~gd~~~~~~~~~~p~i~~s~St-L~~dse---~~Mgwdv~ 233 (356)
T COG3424 158 ANVLVVCVELCSLTYVFADDTKSNLVGTALFGDGAAAVVVSGDRRAEGKRPLRPDILDSFST-LYPDSE---DIMGWDVG 233 (356)
T ss_pred ceEEEEEeeeeeeeeecCCCCcccceeeeeecCCeeEEEEeccccccccCCCCceecccccc-cCCccc---cccceeec
Confidence 9999999999999887765554 78888999999999999986542 22233444443222 222332 22333222
Q ss_pred CCceeeEecchhhHHhHHhhhhhhhhcCCCccchhHHHHHHHHHHHHHhhhhccCCCccchhccccEEEecCCChHHHHH
Q 015082 237 EGKVGVTLSKNLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDE 316 (413)
Q Consensus 237 ~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~al~~~~~~~~~did~~i~hq~~~~~~~~ 316 (413)
+-++.+.||+++|+....+++.+++. ++ -.+. ...+||+.|+.|+++++++++
T Consensus 234 d~G~~~vlSrdlp~lIe~~l~~~V~~--------------fL-------~~~~------ls~~dI~~w~~HPGG~KVida 286 (356)
T COG3424 234 DQGLKVVLSRDLPNLIESYLAPNVTT--------------FL-------ATHG------LSIEDIEAWVVHPGGPKVIDA 286 (356)
T ss_pred CCcEEEEEcCchhHHHHHHhhhhHHH--------------HH-------HHcC------CchhhhceeeeCCCCchHHHH
Confidence 33467789999998876655544431 11 1112 336899999999999999999
Q ss_pred HHHhcCCCcccchhhHHHHhhhcCCCcchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhhhhhhhhcc
Q 015082 317 LEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVWKALR 385 (413)
Q Consensus 317 i~~~lgi~~e~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~l~~Gd~vll~~~G~G~~~~a~llr~~~ 385 (413)
+.+.||++++++..|++.+++||||+||++++.|.+.+++. .++|++++++++|+||+...+|++|..
T Consensus 287 ~~~sLgls~e~l~~s~~~L~~~GNMSSatvLfVL~d~l~~~-~~~g~~Gl~~A~GPGf~sElvL~~w~~ 354 (356)
T COG3424 287 YEESLGLSPEALELSWDVLREYGNMSSATVLFVLEDTLQKA-PKSGSRGLMFAMGPGFCSELVLLDWEG 354 (356)
T ss_pred HHHhcCCCHHHHHHHHHHHHHhCCccchhhHHHHHHHHHhc-CCCCcceeeeecCCcceeeeeeEEeec
Confidence 99999999999999999999999999999999999999875 699999999999999999999999986
No 17
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=2.9e-48 Score=381.81 Aligned_cols=324 Identities=13% Similarity=0.174 Sum_probs=242.5
Q ss_pred eEEEEeeeeecCCCCccccHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCceeecCCcccCCCCCccHHHHHHHHHHHH
Q 015082 3 FGSISNFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDSTYLPEAVLNIPPNPSMKEARKEAEAVM 82 (413)
Q Consensus 3 ~v~I~~ig~~lP~~~~~v~~~el~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~ma~~~~~~~~la 82 (413)
.++|.++|+|+|+ ++++|+|+.+.++. +++ ++.+++||++||++. ++ + +.+|+
T Consensus 4 ~~~I~~~g~~lP~--~~v~~~~~~~~~~~----~~~------~i~~~~Gi~~R~~~~-~~----~----------~~~la 56 (329)
T PRK07204 4 YISIKGIGTYLPK--RKVDSLELDKKLDL----PEG------WVLKKSGVKTRHFVD-GE----T----------SSYMG 56 (329)
T ss_pred CcEEEEEEEeCCC--ceecHHHHHHhhCC----CHh------HhhhccCceEEeecC-CC----C----------HHHHH
Confidence 4799999999999 99999999987653 333 788899999999987 43 2 46788
Q ss_pred HHHHHHHHHhCCCCCCCcCeEEEEc-cCCCCCCChHHHHHHHcCCCC-CcceEEecCccchhHHHHHHHHHHHHHcCCCC
Q 015082 83 FGAIDELFAKTSVKPKDIGILIVNC-SLFNPTPSLSAMVINHYKLRG-NIISYNLGGMGCSAGLISIDLANNLLQVHPNS 160 (413)
Q Consensus 83 ~~Aa~~aL~~ag~~~~~Id~li~~s-~~~~~~p~~a~~v~~~lGl~~-~~~~~~v~~~~C~~~~~al~~A~~~i~~g~~~ 160 (413)
.+|+++||+++|++++|||.||+++ ++++..|..+.+|+++||+++ .+++++++ ++|+|++.||++|..++++|..+
T Consensus 57 ~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~p~~a~~v~~~lgl~~~~~~~~~v~-~~C~~~~~al~~a~~~l~~g~~~ 135 (329)
T PRK07204 57 AEAAKKAVEDAKLTLDDIDCIICASGTIQQAIPCTASLIQEQLGLQHSGIPCFDIN-STCLSFITALDTISYAIECGRYK 135 (329)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCccHHHHHHHHhCCCCCCceEEEcc-chhHHHHHHHHHHHHHHHCCCCC
Confidence 9999999999999999999999986 467678999999999999984 37999999 79999999999999999999999
Q ss_pred eEEEEEEccccCCCccCCCccchhhhcccccCceEEEEecCCCCcccccceEeeeeeeecCCCCccccccccccCCCCce
Q 015082 161 YALVISMENITLNWYFGNDRSKLVSNCLFRMGGAAILLSNRFSDRRRSKYRLVHTVRTHKGADDNCFACVTQEEDSEGKV 240 (413)
Q Consensus 161 ~vLVv~~e~~s~~~~~~~d~~~~~~~~lfGDGAaA~ll~~~~~~~~~~~~~i~~~~~~~~~td~~~~~~~~~~~~~~g~~ 240 (413)
+||||++|.+|. ..++.++.+ ..+|||||+|+||++++.. .+++ ...+.+++.+++....+.+..
T Consensus 136 ~~Lvv~~e~~s~-~~~~~~~~~---~~lfGDGAaA~ll~~~~~~-----~~il---~~~~~t~~~~~~~~~~~~~~~--- 200 (329)
T PRK07204 136 RVLIISSEISSV-GLNWGQNES---CILFGDGAAAVVITKGDHS-----SRIL---ASHMETYSSGAHLSEIRGGGT--- 200 (329)
T ss_pred EEEEEEeccccC-CCCcccCcc---eEEEecccEEEEEEEcCCC-----CcEE---EEEEEEecCCCCceEEecCCc---
Confidence 999999999887 445555443 4789999999999987643 2233 233444554433222221100
Q ss_pred eeEecchhhHHhHHhhhhhhhhcCCCccchhHHHHHHHHHHHHHhhhhccCCCccchhccccEEEecCCChHHHHHHHHh
Q 015082 241 GVTLSKNLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKN 320 (413)
Q Consensus 241 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~al~~~~~~~~~did~~i~hq~~~~~~~~i~~~ 320 (413)
.++.+...... ...| .+...+ .....+....-.++++.++++ .+..++|||+|++||+|.++++.+++.
T Consensus 201 ~~~~~~~~~~~-~~~~--~~~~~~-------~~~~~~~~~~~~~~i~~~L~~-~gl~~~did~~~~H~~~~~~~~~i~~~ 269 (329)
T PRK07204 201 MIHPREYSEER-KEDF--LFDMNG-------RAIFKLSSKYLMKFIDKLLMD-AGYTLADIDLIVPHQASGPAMRLIRKK 269 (329)
T ss_pred CCCCccccccc-ccCc--eEEECC-------HHHHHHHHHHHHHHHHHHHHH-cCCCHHHCCEEEeCCCCHHHHHHHHHH
Confidence 00000000000 0000 000000 000000000112334444443 344579999999999999999999999
Q ss_pred cCCCcccchhhHHHHhhhcCCCcchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhhhhhhhh
Q 015082 321 LQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVWKA 383 (413)
Q Consensus 321 lgi~~e~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~l~~Gd~vll~~~G~G~~~~a~llr~ 383 (413)
||++++++ ..++++|||+++|++|++|++++++|++++||+|++++||+|++|++++|||
T Consensus 270 l~l~~e~~---~~~~~~~Gn~~sas~~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~ll~~ 329 (329)
T PRK07204 270 LGVDEERF---VTIFEDHGNMIAASIPVALFEAIKQKKVQRGNKILLLGTSAGLSIGGILLEY 329 (329)
T ss_pred cCCCHHHh---hhhHhhhCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhheeeEEeC
Confidence 99999998 6899999999999999999999999999999999999999999999999986
No 18
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=100.00 E-value=8.7e-49 Score=384.92 Aligned_cols=324 Identities=16% Similarity=0.226 Sum_probs=242.4
Q ss_pred eEEEEeeeeecCCCCccccHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCceeecCCcccCCCCCccHHHHHHHHHHHH
Q 015082 3 FGSISNFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDSTYLPEAVLNIPPNPSMKEARKEAEAVM 82 (413)
Q Consensus 3 ~v~I~~ig~~lP~~~~~v~~~el~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~ma~~~~~~~~la 82 (413)
.++|.++|+|+|+ ++++|+|+.+.++. +++ +|.+++||++||++.+++ + ..+|+
T Consensus 2 ~v~I~~~g~~lP~--~~v~~~e~~~~~~~----~~~------~i~~~~gi~~r~~~~~~~----~----------~~~la 55 (326)
T CHL00203 2 GVHILSTGSSVPN--FSVENQQFEDIIET----SDH------WISTRTGIKKRHLAPSST----S----------LTKLA 55 (326)
T ss_pred ccEEEEEEEECCC--eEEcHHHHHHhcCC----Chh------hEeeccCeEEEEeCCCCC----C----------HHHHH
Confidence 4799999999999 99999999988752 332 678899999999887664 1 46888
Q ss_pred HHHHHHHHHhCCCCCCCcCeEEEEc-cCCCCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHHcCCCCe
Q 015082 83 FGAIDELFAKTSVKPKDIGILIVNC-SLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSY 161 (413)
Q Consensus 83 ~~Aa~~aL~~ag~~~~~Id~li~~s-~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~~g~~~~ 161 (413)
.+|+++||+++|+++++||.||++| +++.. +..+..++++||+. ++++++++ ++|+|++.||++|.++|++|..++
T Consensus 56 ~~A~~~aL~~ag~~~~dId~vi~~s~~~~~~-~~~~~~v~~~Lg~~-~~~~~~v~-~~Casg~~al~~A~~~i~sg~~~~ 132 (326)
T CHL00203 56 AEAANKALDKAHMDPLEIDLIILATSTPDDL-FGSASQLQAEIGAT-RAVAFDIT-AACSGFILALVTATQFIQNGSYKN 132 (326)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeCCCCCC-CchHHHHHHHhCCC-CCceeeec-ccchhHHHHHHHHHHHHHcCCCCE
Confidence 9999999999999999999999986 45433 34578899999998 68999999 799999999999999999999999
Q ss_pred EEEEEEccccCCCccCCCccchhhhcccccCceEEEEecCCCCcccccceEeeeeeeecCCCCccccccccccCCCCcee
Q 015082 162 ALVISMENITLNWYFGNDRSKLVSNCLFRMGGAAILLSNRFSDRRRSKYRLVHTVRTHKGADDNCFACVTQEEDSEGKVG 241 (413)
Q Consensus 162 vLVv~~e~~s~~~~~~~d~~~~~~~~lfGDGAaA~ll~~~~~~~~~~~~~i~~~~~~~~~td~~~~~~~~~~~~~~g~~~ 241 (413)
+|||++|++|. ..++.++.. ..+|||||+|+||++.+.. .+. .....+++++++.+.....+.....
T Consensus 133 ~Lvv~~e~~s~-~~~~~~~~~---~~~fgDga~A~ll~~~~~~------~~~---~~~~~t~g~~~~~~~~~~~~~~~~~ 199 (326)
T CHL00203 133 ILVVGADTLSK-WIDWSDRKT---CILFGDGAGAAIIGASYEN------SIL---GFKLCTDGKLNSHLQLMNKPVNNQS 199 (326)
T ss_pred EEEEEehhhhC-cCCcccCCc---eEEEcceeeEEEEEEcCCC------CeE---EEEEEEcCCCcceEEecCCCCCccc
Confidence 99999999998 456666543 4799999999999986542 122 2334556665443322111000000
Q ss_pred eEecchhhHHhHHhhhhhhhhcCCCccchhHHHHHHHHHHHHHhhhhccCCCccchhccccEEEecCCChHHHHHHHHhc
Q 015082 242 VTLSKNLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNL 321 (413)
Q Consensus 242 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~al~~~~~~~~~did~~i~hq~~~~~~~~i~~~l 321 (413)
+... ..+..... .+...| .+-+...+. ...++++..+++ .+...+|||+|++||+|+++++.+++.|
T Consensus 200 ~~~~-~~~~~~~~----~~~~~g------~~~~~~~~~-~~~~~i~~~L~~-~g~~~~did~~~~hq~~~~~~~~~~~~l 266 (326)
T CHL00203 200 FGTT-KLPQGQYQ----SISMNG------KEVYKFAVF-QVPAVIIKCLNA-LNISIDEVDWFILHQANKRILEAIANRL 266 (326)
T ss_pred cccc-ccccCCcc----eEEECC------HHHHHHHHH-HHHHHHHHHHHH-cCCCHHHCCEEEECCCCHHHHHHHHHHh
Confidence 0000 00000000 000000 000111111 112334444443 3445799999999999999999999999
Q ss_pred CCCcccchhhHHHHhhhcCCCcchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhhhhhhhhc
Q 015082 322 QLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVWKAL 384 (413)
Q Consensus 322 gi~~e~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~l~~Gd~vll~~~G~G~~~~a~llr~~ 384 (413)
|++++|+ ..++++|||++||++|++|++++++|++++||++++++||+|++|+++++||.
T Consensus 267 gl~~~k~---~~~l~~~Gn~~sasi~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~v~~~~ 326 (326)
T CHL00203 267 SVPNSKM---ITNLEKYGNTSAASIPLALDEAIQNNKIQPGQIIVLSGFGAGLTWGAIVLKWK 326 (326)
T ss_pred CCCHHHh---hhHHHhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEEEchhhhheEEEEEeC
Confidence 9999999 67999999999999999999999999999999999999999999999999984
No 19
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=100.00 E-value=1.4e-48 Score=390.45 Aligned_cols=328 Identities=17% Similarity=0.221 Sum_probs=242.3
Q ss_pred eEEEEeeeeecCCCCccccHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCceeecCCcccCCCCCccHHHHHHHHHHHH
Q 015082 3 FGSISNFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDSTYLPEAVLNIPPNPSMKEARKEAEAVM 82 (413)
Q Consensus 3 ~v~I~~ig~~lP~~~~~v~~~el~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~ma~~~~~~~~la 82 (413)
.++|.|+|+|+|+ ++++|+|+.+.++. +++ +|.+++||++|+++.+++ + +.+|+
T Consensus 47 ~~~I~g~g~~lP~--~~v~n~el~~~~~~----~~~------~i~~~tGi~~R~~~~~~~----~----------~~~La 100 (379)
T PLN02326 47 GSKLVGCGSAVPK--LLITNDDLSKLVDT----SDE------WIATRTGIRNRRVLSGDE----T----------LTSLA 100 (379)
T ss_pred CcEEEEEEEECCC--ceecHHHHHHhcCC----chh------heecccCcceEeecCCCC----C----------HHHHH
Confidence 4799999999999 99999999987652 333 788999999999987664 2 46888
Q ss_pred HHHHHHHHHhCCCCCCCcCeEEEEcc-CCCCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHHcCCCCe
Q 015082 83 FGAIDELFAKTSVKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSY 161 (413)
Q Consensus 83 ~~Aa~~aL~~ag~~~~~Id~li~~s~-~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~~g~~~~ 161 (413)
.+|+++||+++|++++|||.||++++ ++. .+..+..++++||++ +++++|++ ++|+|++.||++|.++|++|..++
T Consensus 101 ~~Aa~~aL~~agi~~~dId~li~~s~~~~~-~~~~a~~v~~~LG~~-~~~~~dv~-~~Ca~~~~aL~~A~~~l~~g~~~~ 177 (379)
T PLN02326 101 VEAAKKALEMAGVDPEDVDLVLLCTSSPDD-LFGSAPQVQAALGCT-NALAFDLT-AACSGFVLGLVTAARFIRGGGYKN 177 (379)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeCCCCc-cCcHHHHHHHHhCCC-CCceeecc-ccchHHHHHHHHHHHHHHcCCCCE
Confidence 99999999999999999999999875 444 346788999999998 79999999 799999999999999999999999
Q ss_pred EEEEEEccccCCCccCCCccchhhhcccccCceEEEEecCCCCcccccceEeeeeeeecCCCCccccccccccCCCCce-
Q 015082 162 ALVISMENITLNWYFGNDRSKLVSNCLFRMGGAAILLSNRFSDRRRSKYRLVHTVRTHKGADDNCFACVTQEEDSEGKV- 240 (413)
Q Consensus 162 vLVv~~e~~s~~~~~~~d~~~~~~~~lfGDGAaA~ll~~~~~~~~~~~~~i~~~~~~~~~td~~~~~~~~~~~~~~g~~- 240 (413)
||||++|.+|. +.++.|+.+ ..+|||||+|+||++++... ..+ ....+.+++.+++.+..+..+....
T Consensus 178 vLVv~~e~~s~-~~~~~d~~~---~~lfGDGAaAvlL~~~~~~~----~~i---~~~~~~t~g~~~~~~~~~~~g~~~~~ 246 (379)
T PLN02326 178 VLVIGADALSR-YVDWTDRGT---CILFGDGAGAVVLQACDDDE----DGL---LGFDMHSDGNGHKHLHATFKGEDDDS 246 (379)
T ss_pred EEEEEechhcC-CCCccccCc---eEEEcceeEEEEEEEcCCCC----Cce---EEEEEEEcCCCCCeEEecCCCCcccc
Confidence 99999999988 556677654 36999999999999876431 112 2233455665554433221100000
Q ss_pred eeEecc---hhhHHhHHhhhhhhhhcCCCccchhHHHHHHHHHHHHHhhhhccCCCccchhccccEEEecCCChHHHHHH
Q 015082 241 GVTLSK---NLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDEL 317 (413)
Q Consensus 241 ~~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~al~~~~~~~~~did~~i~hq~~~~~~~~i 317 (413)
...... +.+... ..+ ..++..|. +-+..... .-.++++..+++ .+...+|||+|++||+|+++++.+
T Consensus 247 ~~~~~~~~~~~~~~~-~~~-~~~~~~g~------~v~~~~~~-~~~~~i~~~L~~-~gl~~~dId~~v~Hq~n~~~~~~~ 316 (379)
T PLN02326 247 SGGNTNGVGDFPPKK-ASY-SCIQMNGK------EVFKFAVR-CVPQVIESALQK-AGLTAESIDWLLLHQANQRIIDAV 316 (379)
T ss_pred ccccccccccccccc-ccc-cceEecCH------HHHHHHHH-HHHHHHHHHHHH-cCCCHHHCCEEEECCCCHHHHHHH
Confidence 000000 000000 000 00110000 00110011 011223333332 334468999999999999999999
Q ss_pred HHhcCCCcccchhhHHHHhhhcCCCcchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhhhhhhhh
Q 015082 318 EKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVWKA 383 (413)
Q Consensus 318 ~~~lgi~~e~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~l~~Gd~vll~~~G~G~~~~a~llr~ 383 (413)
++.||++++|+ ..++++|||++|||+|++|++++++|++++||+|++++||+|++|++++++|
T Consensus 317 ~~~Lgl~~ek~---~~~l~~~GNt~sAsi~~~L~~~~~~g~~~~Gd~vll~~~G~G~t~~~~ll~~ 379 (379)
T PLN02326 317 AQRLGIPPEKV---ISNLANYGNTSAASIPLALDEAVRSGKVKKGDVIATAGFGAGLTWGSAIVRW 379 (379)
T ss_pred HHHcCCCHHHe---eecHhhcCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEChhheeeEEEEEC
Confidence 99999999998 5688999999999999999999999999999999999999999999999987
No 20
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=6.8e-48 Score=378.43 Aligned_cols=321 Identities=19% Similarity=0.236 Sum_probs=244.9
Q ss_pred eEEEEeeeeecCCCCccccHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCceeecCCcccCCCCCccHHHHHHHHHHHH
Q 015082 3 FGSISNFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDSTYLPEAVLNIPPNPSMKEARKEAEAVM 82 (413)
Q Consensus 3 ~v~I~~ig~~lP~~~~~v~~~el~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~ma~~~~~~~~la 82 (413)
.++|.++|+|+|+ ++++++|+.+..+. +.+ ++++++||++||++.+++ + ..+|+
T Consensus 4 ~~~I~~ig~~~P~--~~v~~~e~~~~~~~----~~~------~i~~~~Gi~~r~~~~~~~----~----------~~~la 57 (325)
T PRK12879 4 YARITGIGTYVPP--RVLTNDDLETFIDT----SDE------WIVQRTGIKERRIAHVEE----Y----------TSDLA 57 (325)
T ss_pred CCEEEEEEEECCC--cEEcHHHHHHhcCC----CHH------HhhhccCceEEEECCCCC----C----------HHHHH
Confidence 5799999999999 99999999987652 333 688899999999987664 2 46788
Q ss_pred HHHHHHHHHhCCCCCCCcCeEEEEcc-CCCCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHHcCCCCe
Q 015082 83 FGAIDELFAKTSVKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSY 161 (413)
Q Consensus 83 ~~Aa~~aL~~ag~~~~~Id~li~~s~-~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~~g~~~~ 161 (413)
.+|+++||+++|+++++||.||++++ +++..|+.+.+|+++||++ ++++++++ ++|+|++.||.+|.++|++|+.++
T Consensus 58 ~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~a~~l~~~lg~~-~~~~~~v~-~~C~~~~~al~~A~~~l~~g~~~~ 135 (325)
T PRK12879 58 IKAAERALARAGLDAEDIDLIIVATTTPDYLFPSTASQVQARLGIP-NAAAFDIN-AACAGFLYGLETANGLITSGLYKK 135 (325)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHhCCC-CCcEEEEC-ccchHHHHHHHHHHHHHHcCCCCE
Confidence 99999999999999999999999864 6777899999999999998 58999999 799999999999999999999999
Q ss_pred EEEEEEccccCCCccCCCccchhhhcccccCceEEEEecCCCCcccccceEeeeeeeecCCCCccccccccccCCCCcee
Q 015082 162 ALVISMENITLNWYFGNDRSKLVSNCLFRMGGAAILLSNRFSDRRRSKYRLVHTVRTHKGADDNCFACVTQEEDSEGKVG 241 (413)
Q Consensus 162 vLVv~~e~~s~~~~~~~d~~~~~~~~lfGDGAaA~ll~~~~~~~~~~~~~i~~~~~~~~~td~~~~~~~~~~~~~~g~~~ 241 (413)
||||++|++|. +.++.++.. ..+|||||+|+||++++... + +......+++++++.++.+..+.
T Consensus 136 ~Lvv~~e~~s~-~~~~~~~~~---~~~~GDgAaA~ll~~~~~~~-----~---~~~~~~~~~~~~~~~~~~~~~~~---- 199 (325)
T PRK12879 136 VLVIGAERLSK-VTDYTDRTT---CILFGDGAGAVVLEATENEP-----G---FIDYVLGTDGDGGDILYRTGLGT---- 199 (325)
T ss_pred EEEEEehhhcC-cCCccccCc---eEEEeecceEEEEEecCCCC-----C---eEEEEEEEcCCCCCeEEEcCCCC----
Confidence 99999999887 345555543 37899999999999877531 2 22233455666555444332110
Q ss_pred eEecchhhHHhHHhhhhhhhhcCCCccchhHHHHHHHHHHHHHhhhhccCCCccchhccccEEEecCCChHHHHHHHHhc
Q 015082 242 VTLSKNLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNL 321 (413)
Q Consensus 242 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~al~~~~~~~~~did~~i~hq~~~~~~~~i~~~l 321 (413)
....+ +..... .+...+ .+-+....+. -.++++.++++ .+..++|||+|++||+|+++++.++++|
T Consensus 200 -~~~~~-~~~~~~----~~~~~~------~~~~~~~~~~-~~~~i~~~L~~-~g~~~~did~~~~h~~~~~~~~~~~~~l 265 (325)
T PRK12879 200 -TMDRD-ALSGDG----YIVQNG------REVFKWAVRT-MPKGARQVLEK-AGLTKDDIDWVIPHQANLRIIESLCEKL 265 (325)
T ss_pred -CCCcc-ccccCc----cEEEcC------HHHHHHHHHH-HHHHHHHHHHH-cCCCHHHCCEEEECCCCHHHHHHHHHHc
Confidence 00000 000000 000000 0000000110 01223333332 2334789999999999999999999999
Q ss_pred CCCcccchhhHHHHhhhcCCCcchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhhhhhhhhc
Q 015082 322 QLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVWKAL 384 (413)
Q Consensus 322 gi~~e~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~l~~Gd~vll~~~G~G~~~~a~llr~~ 384 (413)
|++.+|+ ..++++|||+++|++|++|++++++|++++||++++++||+|++|+++++||.
T Consensus 266 g~~~~~~---~~~~~~~Gn~~sas~~~~L~~~~~~g~~~~Gd~vll~~~G~G~~~~~~l~~~~ 325 (325)
T PRK12879 266 GIPMEKT---LVSVEYYGNTSAATIPLALDLALEQGKIKPGDTLLLYGFGAGLTWAALLVKWG 325 (325)
T ss_pred CCCHHHh---hhhHhhhCchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhhEEEEEEeC
Confidence 9999998 55899999999999999999999999999999999999999999999999984
No 21
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=6.6e-47 Score=373.47 Aligned_cols=318 Identities=18% Similarity=0.172 Sum_probs=241.8
Q ss_pred eEEEEeeeeecCCCCccccHHHHHHHHHhcC---CCChhhHHHHHHHHHHcCCCceeecCCcccCCCCCccHHHHHHHHH
Q 015082 3 FGSISNFSCYKPEESRKCTKRIFMDQSRMTG---TFTEENLQFQKKILERSGLGDSTYLPEAVLNIPPNPSMKEARKEAE 79 (413)
Q Consensus 3 ~v~I~~ig~~lP~~~~~v~~~el~~~~~~~~---~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~ma~~~~~~~ 79 (413)
.++|.++|+|+|+ ++++|+++.+.+.... ..++ .++.+.+||++||+..+++ + ..
T Consensus 5 ~v~I~~~g~~lP~--~~v~~~~~~~~~~~~~~~~~~~~------~~i~~~~Gi~~R~~~~~~~----~----------~~ 62 (338)
T PRK09258 5 NVAILSLAYELAP--VVVTSSEIEERLAPLYERLRLPP------GQLEALTGIRERRWWPEGT----Q----------LS 62 (338)
T ss_pred ceEEEEEEecCCC--ccCcHHHHHHHhhhcccccCCCh------hHhhhhcCceeEecCCCCC----C----------HH
Confidence 4899999999999 9999999998765422 1122 2677889999999976543 2 46
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCeEEEEc-cCCCCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHHcCC
Q 015082 80 AVMFGAIDELFAKTSVKPKDIGILIVNC-SLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHP 158 (413)
Q Consensus 80 ~la~~Aa~~aL~~ag~~~~~Id~li~~s-~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~~g~ 158 (413)
+|+.+|+++||+++|+++++||.||+++ ++++..|+++..++++||+++++++++++ ++|+|++.||++|.++|++|.
T Consensus 63 ~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~~p~~a~~v~~~lgl~~~~~~~~v~-~~C~~~~~al~~A~~~i~~g~ 141 (338)
T PRK09258 63 DGAIAAGRKALAEAGIDPSDIGLLINTSVCRDYLEPATACRVHHNLGLPKSCANFDVS-NACLGFLNGMLDAANMIELGQ 141 (338)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHcCCCCCCceeehh-hhhHHHHHHHHHHHHHHHcCC
Confidence 7889999999999999999999999987 46888899999999999998668999999 699999999999999999999
Q ss_pred CCeEEEEEEccccCCCccCC------Ccc------chhhhcccccCceEEEEecCCCCcccccceEeeeeeeecCCCCcc
Q 015082 159 NSYALVISMENITLNWYFGN------DRS------KLVSNCLFRMGGAAILLSNRFSDRRRSKYRLVHTVRTHKGADDNC 226 (413)
Q Consensus 159 ~~~vLVv~~e~~s~~~~~~~------d~~------~~~~~~lfGDGAaA~ll~~~~~~~~~~~~~i~~~~~~~~~td~~~ 226 (413)
.++||||++|+++.. .++. +.. ..+...+|||||+|+||++.+... ..+++.+ ....+++++
T Consensus 142 ~~~~Lvv~~e~~s~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~GDGA~A~ll~~~~~~~--~~~~~~~---~~~~~~~~~ 215 (338)
T PRK09258 142 IDYALVVSGESAREI-VEATIDRLLAPETTREDFAQSFATLTLGSGAAAAVLTRGSLHP--RGHRLLG---GVTRAATEH 215 (338)
T ss_pred CCEEEEEEecccchh-ccchhhhhccCccchhhhhhccceEEecccceEEEEecCCCCC--Ccceeee---eeeecCCCc
Confidence 999999999998872 2211 111 112346899999999999865421 1233333 223445544
Q ss_pred ccccccccCCCCceeeEecchhhHHhHHhhhhhhhhcCCCccchhHHHHHHHHHHHHHhhhhccCCCccchhccccEEEe
Q 015082 227 FACVTQEEDSEGKVGVTLSKNLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDFKLAFEHFCI 306 (413)
Q Consensus 227 ~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~al~~~~~~~~~did~~i~ 306 (413)
++.+ .+. ...+..+.+.... .++.. ..++++..+++ .+...+|||+|++
T Consensus 216 ~~~~-~~~------~~~~~~~~~~~~~----------------------~~~~~-~~~~~~~~L~~-~g~~~~did~~i~ 264 (338)
T PRK09258 216 HELC-QGG------RDGMRTDAVGLLK----------------------EGVEL-AVDTWEAFLAQ-LGWAVEQVDRVIC 264 (338)
T ss_pred cccc-ccC------ccceEEcHHHHHH----------------------HHHHH-HHHHHHHHHHH-cCCCHHHCCEEec
Confidence 4321 110 0111112221110 01111 11233333333 3344689999999
Q ss_pred cCCChHHHHHHHHhcCCCcccchhhHHHHhhhcCCCcchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhhhhhhhh
Q 015082 307 HAGGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVWKA 383 (413)
Q Consensus 307 hq~~~~~~~~i~~~lgi~~e~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~l~~Gd~vll~~~G~G~~~~a~llr~ 383 (413)
||+|+++++.+++.||++++|+ +.++++||||++|++|++|++++++|++++||++++++||+|++++++++||
T Consensus 265 H~~~~~~~~~~~~~lgl~~~k~---~~~~~~~GN~~sas~~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~~~~~ 338 (338)
T PRK09258 265 HQVGAAHTRAILKALGIDPEKV---FTTFPTLGNMGPASLPITLAMAAEEGFLKPGDRVALLGIGSGLNCSMLEVKW 338 (338)
T ss_pred CCCCHHHHHHHHHHhCCCHHHc---eehHhhhCCcHHhHHHHHHHHHHHhCCCCCCCEEEEEEechhHhhHhHeeeC
Confidence 9999999999999999999999 5688999999999999999999999999999999999999999999999987
No 22
>PRK06840 hypothetical protein; Validated
Probab=100.00 E-value=1.1e-46 Score=371.96 Aligned_cols=327 Identities=15% Similarity=0.139 Sum_probs=245.1
Q ss_pred eEEEEeeeeecCCCCccccHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCceeecCCcccCCCCCccHHHHHHHHHHHH
Q 015082 3 FGSISNFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDSTYLPEAVLNIPPNPSMKEARKEAEAVM 82 (413)
Q Consensus 3 ~v~I~~ig~~lP~~~~~v~~~el~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~ma~~~~~~~~la 82 (413)
.++|.++++|+|+ ++++|+|+.+..+. +.+ ++.+++||++||++.+++ + ..+|+
T Consensus 4 ~v~I~~~~~~lP~--~~v~~~~l~~~~g~----~~~------~~~~~~Gi~~r~~~~~~~----~----------~~~la 57 (339)
T PRK06840 4 NVGIVGTGVYLPK--DVMTAEEIAEKTGI----PEE------VVIEKFGIYEKPVPGPED----H----------TSDMA 57 (339)
T ss_pred ceEEEEEEEeCCC--cccCHHHHHHHhCC----CHH------HHhhhcCcceEeeCCCCC----C----------HHHHH
Confidence 5899999999999 99999999987763 333 677889999999987654 2 46788
Q ss_pred HHHHHHHHHhCCCCCCCcCeEEEEc-c-CCCCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHHc-CCC
Q 015082 83 FGAIDELFAKTSVKPKDIGILIVNC-S-LFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQV-HPN 159 (413)
Q Consensus 83 ~~Aa~~aL~~ag~~~~~Id~li~~s-~-~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~~-g~~ 159 (413)
.+|+++||+++|++++|||.||+++ + +++..|+.+.+|+++||++ ++++++++ ++|++++.||.+|.+++++ |..
T Consensus 58 ~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~~p~~a~~l~~~lGl~-~~~~~~v~-~~C~~~~~al~~A~~~l~~~g~~ 135 (339)
T PRK06840 58 IAAAKPALKQAGVDPAAIDVVIYIGSEHKDYPVWSSAPKIQHEIGAK-NAWAFDIM-AVCASFPIALKVAKDLLYSDPSI 135 (339)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEeccCCCCCCCCchHHHHHHHhCCC-Cccccccc-ccchHHHHHHHHHHHHHhcCCCc
Confidence 9999999999999999999999764 3 5777899999999999997 68999999 7999999999999999999 778
Q ss_pred CeEEEEEEccccCCCccCCCccchhhhcccccCceEEEEecCCCCcccccceEeeeeeeecCCCCccccccccccCCCCc
Q 015082 160 SYALVISMENITLNWYFGNDRSKLVSNCLFRMGGAAILLSNRFSDRRRSKYRLVHTVRTHKGADDNCFACVTQEEDSEGK 239 (413)
Q Consensus 160 ~~vLVv~~e~~s~~~~~~~d~~~~~~~~lfGDGAaA~ll~~~~~~~~~~~~~i~~~~~~~~~td~~~~~~~~~~~~~~g~ 239 (413)
+++|||++|+.+. +.++.++.+.. ..+|||||+|+||++++.. .++ +.....+++++++.+..+.++.
T Consensus 136 ~~~Lvv~~~~~s~-~~~~~~~~~~~-~~~~GDgAaA~ll~~~~~~-----~~i---l~~~~~t~~~~~~~~~~~~~g~-- 203 (339)
T PRK06840 136 ENVLLVGGYRNSD-LVDYDNPRTRF-MFNFAAGGSAALLKKDAGK-----NRI---LGSAIITDGSFSEDVRVPAGGT-- 203 (339)
T ss_pred cEEEEEeeccccc-ccCcCCCCeee-eccCCCceeEEEEEecCCC-----Cce---EEEEEEEcCCccceEEecCCCc--
Confidence 9999999999887 44554443310 1347999999999987643 233 3344567777776655543311
Q ss_pred eeeEecchhhHHhHHhhhhhhhhcCCCccchhHHHHHHHH----HHHHHhhhhccCCCccchhccccEEEecCCChHHHH
Q 015082 240 VGVTLSKNLMAVAGDALKTNITTLGPLVLPMSEQLLFFAT----LVGKKLFKMKIKPYIPDFKLAFEHFCIHAGGRAVLD 315 (413)
Q Consensus 240 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~v~~~al~~~~~~~~~did~~i~hq~~~~~~~ 315 (413)
..+++.+.... +.. .+...+ .+.+...+. ..-.++++..+++ .+...+|||+|++||.|+++++
T Consensus 204 -~~~~~~~~~~~-~~~---~~~~~~------~~~~~~~~~~~~~~~~~~~i~~~L~~-~gl~~~did~~~~h~~~~~~~~ 271 (339)
T PRK06840 204 -KQPASPETVEN-RQH---YLDVID------PESMKERLDEVSIPNFLKVIREALRK-SGYTPKDIDYLAILHMKRSAHI 271 (339)
T ss_pred -CCCCccccccc-ccc---eEEEcC------cHHHHHHhHhhHHHHHHHHHHHHHHH-cCCCHHHCCEEEECCcCHHHHH
Confidence 11111100000 000 000000 000000000 0012333444433 3345789999999999999999
Q ss_pred HHHHhcCCCcccchhhHHHHhhhcCCCcchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhhhhhhhhcc
Q 015082 316 ELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVWKALR 385 (413)
Q Consensus 316 ~i~~~lgi~~e~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~l~~Gd~vll~~~G~G~~~~a~llr~~~ 385 (413)
.++++||++++|+ . ++++||||++|++|++|+++++++++++||++++++||+|++|+++++||.+
T Consensus 272 ~~~~~Lgl~~~~~---~-~~~~~Gn~~sas~~~~L~~~~~~~~~~~Gd~ill~~~G~G~s~~~~~l~~~~ 337 (339)
T PRK06840 272 ALLEGLGLTEEQA---I-YLDEYGHLGQLDQILSLHLALEQGKLKDGDLVVLVSAGTGYTWAATVIRWGP 337 (339)
T ss_pred HHHHHcCCCHHHe---E-eHHhccchhhhhHHHHHHHHHHcCCCCCCCEEEEEEEehhhheeEEEEEecC
Confidence 9999999999997 2 6899999999999999999999999999999999999999999999999964
No 23
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=100.00 E-value=1.9e-46 Score=367.10 Aligned_cols=315 Identities=21% Similarity=0.288 Sum_probs=244.7
Q ss_pred EEEEeeeeecCCCCccccHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCceeecCCcccCCCCCccHHHHHHHHHHHHH
Q 015082 4 GSISNFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDSTYLPEAVLNIPPNPSMKEARKEAEAVMF 83 (413)
Q Consensus 4 v~I~~ig~~lP~~~~~v~~~el~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~ma~~~~~~~~la~ 83 (413)
++|.++++|+|+ ++++++|+.+.++. ++. ++++++||++||+..+++ + +.+|+.
T Consensus 3 ~~I~~i~~~~P~--~~~~~~~~~~~~~~----~~~------~i~~~~gi~~r~~~~~~~----~----------~~~la~ 56 (318)
T TIGR00747 3 AGILGTGSYLPE--KVLTNADLEKMVDT----SDE------WIVTRTGIKERRIAADDE----T----------SSTMGF 56 (318)
T ss_pred CEEEEEEEECCC--ceecHHHHHHhcCC----chH------HeecccCceEEEECCCCC----C----------HHHHHH
Confidence 799999999999 99999999987753 332 678889999999987664 2 467889
Q ss_pred HHHHHHHHhCCCCCCCcCeEEEEcc-CCCCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHHcCCCCeE
Q 015082 84 GAIDELFAKTSVKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYA 162 (413)
Q Consensus 84 ~Aa~~aL~~ag~~~~~Id~li~~s~-~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~~g~~~~v 162 (413)
+|+++||+++|+++++||.|+++++ +++..|+.+.+++..||++ ++++++++ ++|++++.||++|.++|++|..+++
T Consensus 57 ~A~~~al~~agl~~~~Id~~i~~~~~~~~~~~~~a~~l~~~lGl~-~~~~~~v~-~~C~s~~~al~~A~~~i~~g~~~~~ 134 (318)
T TIGR00747 57 EAAKRAIENAGISKDDIDLIIVATTTPDHAFPSAACMVQAYLGIK-GIPAFDLS-AACAGFIYALSVAKQYIESGKYKTV 134 (318)
T ss_pred HHHHHHHHHcCCCHHHCCEEEEECCCCCCCCChHHHHHHHHhCCC-CCcEeehh-hhhHHHHHHHHHHHHHHHcCCCCEE
Confidence 9999999999999999999999864 6777888999999999998 58999999 7999999999999999999999999
Q ss_pred EEEEEccccCCCccCCCccchhhhcccccCceEEEEecCCCCcccccceEeeeeeeecCCCCccccccccccCCCCceee
Q 015082 163 LVISMENITLNWYFGNDRSKLVSNCLFRMGGAAILLSNRFSDRRRSKYRLVHTVRTHKGADDNCFACVTQEEDSEGKVGV 242 (413)
Q Consensus 163 LVv~~e~~s~~~~~~~d~~~~~~~~lfGDGAaA~ll~~~~~~~~~~~~~i~~~~~~~~~td~~~~~~~~~~~~~~g~~~~ 242 (413)
||+++|.++. +.++.++.. ..+|||||+|+||++++... ++. .....+++++++.++.+.+....
T Consensus 135 Lvv~~e~~~~-~~~~~~~~~---~~~~GDGAaA~lL~~~~~~~-----~i~---~~~~~~~~~~~~~~~~~~~~~~~--- 199 (318)
T TIGR00747 135 LVVGAEKLSS-TLDWTDRGT---CVLFGDGAGAVVLGESEDPG-----GII---STHLGADGTQGEALYLPAGGRPT--- 199 (318)
T ss_pred EEEEehhhcC-cCCcCCCCe---EEEEecceeEEEEeecCCCC-----cEE---EEEEEEcCCCcceEEECCCCcCC---
Confidence 9999999887 445555543 36899999999999876531 222 23345567666665555331100
Q ss_pred EecchhhHHhHHhhhhhhhhcCCCccchhHHHHHHHHHHHHHhhhhccCCCccchhccccEEEecCCChHHHHHHHHhcC
Q 015082 243 TLSKNLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLQ 322 (413)
Q Consensus 243 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~al~~~~~~~~~did~~i~hq~~~~~~~~i~~~lg 322 (413)
... ..+ ....+ .+.+..++.. ..++++.++++ .+..++||++|++||+++++++.+++.||
T Consensus 200 -~~~-------~~~---~~~~~------~~~~~~~~~~-~~~~~~~~l~~-~g~~~~di~~~~~h~~~~~~~~~~~~~lg 260 (318)
T TIGR00747 200 -SGP-------SPF---ITMEG------NEVFKHAVRK-MGDVVEETLEA-NGLDPEDIDWFVPHQANLRIIEALAKRLE 260 (318)
T ss_pred -CCC-------CCc---eEECC------HHHHHHHHHH-HHHHHHHHHHH-cCCCHHHCCEEEECCCCHHHHHHHHHHcC
Confidence 000 000 00000 0001111111 11233333332 33346899999999999999999999999
Q ss_pred CCcccchhhHHHHhhhcCCCcchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhhhhhhhh
Q 015082 323 LSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVWKA 383 (413)
Q Consensus 323 i~~e~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~l~~Gd~vll~~~G~G~~~~a~llr~ 383 (413)
++++|+ ..++++|||+++|++|++|++++++|++++||+|+++++|+|++|+++++||
T Consensus 261 i~~~k~---~~~~~~~Gn~~sas~~~~L~~~~~~~~~~~Gd~vll~~~G~G~t~~~~~l~~ 318 (318)
T TIGR00747 261 LDMSQV---VKTVHKYGNTSAASIPLALDELLRTGRIKPGDLLLLVAFGGGLTWGAALVRF 318 (318)
T ss_pred CCHHHe---eehHhhhCCHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEehhheeeEEEEEC
Confidence 999999 5789999999999999999999999999999999999999999999999997
No 24
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=100.00 E-value=4.5e-46 Score=364.50 Aligned_cols=318 Identities=20% Similarity=0.284 Sum_probs=243.8
Q ss_pred EEEEeeeeecCCCCccccHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCceeecCCcccCCCCCccHHHHHHHHHHHHH
Q 015082 4 GSISNFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDSTYLPEAVLNIPPNPSMKEARKEAEAVMF 83 (413)
Q Consensus 4 v~I~~ig~~lP~~~~~v~~~el~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~ma~~~~~~~~la~ 83 (413)
++|.++++|+|+ ++++++|+.+.++. +.+ ++.+++||++||++.+++ + ..+|+.
T Consensus 2 ~~I~~i~~~lP~--~~~~~~~~~~~~~~----~~~------~~~~~~Gi~~r~~~~~~~----~----------~~~la~ 55 (320)
T cd00830 2 ARILGIGSYLPE--RVVTNDELEKRLDT----SDE------WIRTRTGIRERRIADPGE----T----------TSDLAV 55 (320)
T ss_pred CEEEEEEEECCC--cEEcHHHHHHHcCC----CHH------HhhhccCceEEeeCCCCC----C----------HHHHHH
Confidence 689999999999 99999999988753 332 778899999999987653 2 467889
Q ss_pred HHHHHHHHhCCCCCCCcCeEEEEcc-CCCCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHHcCCCCeE
Q 015082 84 GAIDELFAKTSVKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYA 162 (413)
Q Consensus 84 ~Aa~~aL~~ag~~~~~Id~li~~s~-~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~~g~~~~v 162 (413)
+|++++|+++|+++++||.||++++ +++..|+.+.+++.+||++ ++++++++ ++|++++.||.+|.++|++|+.++|
T Consensus 56 ~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~~~~l~~~lg~~-~~~~~~v~-~~C~s~~~al~~A~~~i~~g~~~~v 133 (320)
T cd00830 56 EAAKKALEDAGIDADDIDLIIVATSTPDYLFPATACLVQARLGAK-NAAAFDIN-AACSGFLYGLSTAAGLIRSGGAKNV 133 (320)
T ss_pred HHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCC-CCcEeecc-ccchHHHHHHHHHHHHHHcCCCCEE
Confidence 9999999999999999999999864 5666899999999999998 79999999 7999999999999999999999999
Q ss_pred EEEEEccccCCCccCCCccchhhhcccccCceEEEEecCCCCcccccceEeeeeeeecCCCCccccccccccCCCCceee
Q 015082 163 LVISMENITLNWYFGNDRSKLVSNCLFRMGGAAILLSNRFSDRRRSKYRLVHTVRTHKGADDNCFACVTQEEDSEGKVGV 242 (413)
Q Consensus 163 LVv~~e~~s~~~~~~~d~~~~~~~~lfGDGAaA~ll~~~~~~~~~~~~~i~~~~~~~~~td~~~~~~~~~~~~~~g~~~~ 242 (413)
|||++|.++. ..++.++.. .++|||||+|+||++++.. +++.+ ....+++.+++.+..+.++.. .
T Consensus 134 Lvv~~e~~s~-~~~~~~~~~---~~~~GDgAaA~ll~~~~~~-----~~i~~---~~~~~~~~~~~~~~~~~~~~~---~ 198 (320)
T cd00830 134 LVVGAETLSR-ILDWTDRST---AVLFGDGAGAVVLEATEED-----PGILD---SVLGSDGSGADLLTIPAGGSR---S 198 (320)
T ss_pred EEEEehhhcc-ccCcccCCc---eEEEeccceEEEEEecCCC-----CcEEE---EEEEEcCCCCCeEEeCCCCcC---C
Confidence 9999999887 334444432 4799999999999987652 23333 344566766665554432110 0
Q ss_pred EecchhhHHhHHhhhhhhhhcCCCccchhHHHHHHHHHHHHHhhhhccCCCccchhccccEEEecCCChHHHHHHHHhcC
Q 015082 243 TLSKNLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLQ 322 (413)
Q Consensus 243 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~al~~~~~~~~~did~~i~hq~~~~~~~~i~~~lg 322 (413)
+.. ....... .+...+. .-+..+.. ...++++..+++ .+..++|||+|++||+|+++++.+++.||
T Consensus 199 ~~~--~~~~~~~----~~~~~~~------~~~~~~~~-~~~~~i~~~l~~-~g~~~~di~~~~~h~~~~~~~~~~~~~lg 264 (320)
T cd00830 199 PFE--DAEGGDP----YLVMDGR------EVFKFAVR-LMPESIEEALEK-AGLTPDDIDWFVPHQANLRIIEAVAKRLG 264 (320)
T ss_pred ccc--cccccCc----cEEEcCh------HHHHHHHH-hhHHHHHHHHHH-cCCCHHHCCEEEECCCCHHHHHHHHHHhC
Confidence 000 0000000 0000000 00001111 112333333433 33457899999999999999999999999
Q ss_pred CCcccchhhHHHHhhhcCCCcchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhhhhhh
Q 015082 323 LSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVW 381 (413)
Q Consensus 323 i~~e~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~l~~Gd~vll~~~G~G~~~~a~ll 381 (413)
++++|+ ..++++|||+++|++|++|+++++++++++||+++++++|+|++|+++++
T Consensus 265 l~~~~~---~~~~~~~Gn~~sas~~~~L~~~~~~~~~~~G~~vll~~~G~G~~~~~~l~ 320 (320)
T cd00830 265 LPEEKV---VVNLDRYGNTSAASIPLALDEAIEEGKLKKGDLVLLLGFGAGLTWGAALL 320 (320)
T ss_pred CCHHHh---hhhHHhhCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchHHhhHHhhC
Confidence 999998 67999999999999999999999999999999999999999999999885
No 25
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=3.8e-45 Score=358.01 Aligned_cols=318 Identities=21% Similarity=0.295 Sum_probs=246.0
Q ss_pred CceEEEEeeeeecCCCCccccHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCceeecCCcccCCCCCccHHHHHHHHHH
Q 015082 1 MIFGSISNFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDSTYLPEAVLNIPPNPSMKEARKEAEA 80 (413)
Q Consensus 1 ~~~v~I~~ig~~lP~~~~~v~~~el~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~ma~~~~~~~~ 80 (413)
|-.|+|.++++|+|+ ++++++++.+..+. +++ +|.+++||++|+++.+++ + ..+
T Consensus 1 ~~~v~I~ai~~~lP~--~~~~~~~~~~~~~~----~~~------~i~~~~gi~~r~~~~~~~----~----------~~~ 54 (319)
T PRK09352 1 MMYAKILGTGSYLPE--RVVTNDDLEKMVDT----SDE------WIVTRTGIKERRIAAPDE----T----------TSD 54 (319)
T ss_pred CCceEEEEEEEECCC--eEEcHHHHHHHcCC----CHH------HhhhhcCeEEEEeCCCCC----C----------HHH
Confidence 667999999999999 99999999988753 332 677889999999876653 1 467
Q ss_pred HHHHHHHHHHHhCCCCCCCcCeEEEEcc-CCCCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHHcCCC
Q 015082 81 VMFGAIDELFAKTSVKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPN 159 (413)
Q Consensus 81 la~~Aa~~aL~~ag~~~~~Id~li~~s~-~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~~g~~ 159 (413)
|+.+|++++|+++|+++++||.|+++++ ++...|+.+..|+.++|+. .+++++++ ++|++++.||..|.++|++|.+
T Consensus 55 la~~A~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~~~i~~~lG~~-~~~~~~v~-~~Casg~~al~~A~~~i~~g~~ 132 (319)
T PRK09352 55 LATEAAKKALEAAGIDPEDIDLIIVATTTPDYAFPSTACLVQARLGAK-NAAAFDLS-AACSGFVYALSTADQFIRSGAY 132 (319)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHHHHhCCC-CCcEeecc-ccchhHHHHHHHHHHHHHcCCC
Confidence 8899999999999999999999999864 5666788899999999996 68999999 7999999999999999999999
Q ss_pred CeEEEEEEccccCCCccCCCccchhhhcccccCceEEEEecCCCCcccccceEeeeeeeecCCCCccccccccccCCCCc
Q 015082 160 SYALVISMENITLNWYFGNDRSKLVSNCLFRMGGAAILLSNRFSDRRRSKYRLVHTVRTHKGADDNCFACVTQEEDSEGK 239 (413)
Q Consensus 160 ~~vLVv~~e~~s~~~~~~~d~~~~~~~~lfGDGAaA~ll~~~~~~~~~~~~~i~~~~~~~~~td~~~~~~~~~~~~~~g~ 239 (413)
++|||+++|+++. ..++.++.. ..+|||||+|+||++++.. ++. ...+.+++++.+.++.|.+....
T Consensus 133 ~~vLvv~~e~~s~-~~~~~~~~~---~~~~gDGaaA~ll~~~~~~------~~~---~~~~~~~~~~~~~~~~~~~~~~~ 199 (319)
T PRK09352 133 KNVLVIGAEKLSR-IVDWTDRST---CVLFGDGAGAVVLGASEEP------GIL---STHLGSDGSYGDLLYLPGGGSRG 199 (319)
T ss_pred CEEEEEEehhhcc-ccCcccCCc---eEEEeccceEEEEEEcCCC------CeE---EEEEEEcCCCCCeEEeCCCCCCC
Confidence 9999999999887 344455443 3699999999999987642 122 23344566655554444331100
Q ss_pred eeeEecchhhHHhHHhhhhhhhhcCCCccchhHHHHHHHHHHHHHhhhhccCCCccchhccccEEEecCCChHHHHHHHH
Q 015082 240 VGVTLSKNLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEK 319 (413)
Q Consensus 240 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~al~~~~~~~~~did~~i~hq~~~~~~~~i~~ 319 (413)
+.+.......+. +-+..+... ..++++.++++ .+..++|||+|++||+|+++++.+++
T Consensus 200 ---~~~~~~~~~~~~-----------------~~~~~~~~~-~~~~i~~~l~~-~g~~~~di~~~~~h~~~~~~~~~~~~ 257 (319)
T PRK09352 200 ---PASPGYLRMEGR-----------------EVFKFAVRE-LAKVAREALEA-AGLTPEDIDWLVPHQANLRIIDATAK 257 (319)
T ss_pred ---CCCCCceEECCH-----------------HHHHHHHHH-HHHHHHHHHHH-cCCCHHHCCEEEECCCCHHHHHHHHH
Confidence 000000000000 000111111 12344444433 33447899999999999999999999
Q ss_pred hcCCCcccchhhHHHHhhhcCCCcchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhhhhhhhhc
Q 015082 320 NLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVWKAL 384 (413)
Q Consensus 320 ~lgi~~e~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~l~~Gd~vll~~~G~G~~~~a~llr~~ 384 (413)
.||++.+++ ..++.+|||+++|+++++|++++++|++++||++++++||+|++|+++++||.
T Consensus 258 ~lg~~~~~~---~~~~~~~Gn~~~a~~~~~L~~~~~~g~~~~Gd~vll~s~G~G~~~~~~ll~~~ 319 (319)
T PRK09352 258 KLGLPMEKV---VVTVDKYGNTSAASIPLALDEAVRDGRIKRGDLVLLEGFGGGLTWGAALVRWP 319 (319)
T ss_pred HhCCCHHHh---hhhHHhhCCHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhheeEEEEEEeC
Confidence 999999998 67899999999999999999999999999999999999999999999999984
No 26
>PRK04262 hypothetical protein; Provisional
Probab=100.00 E-value=1.5e-44 Score=357.71 Aligned_cols=308 Identities=17% Similarity=0.171 Sum_probs=231.7
Q ss_pred eEEEEeeeeecCCCCccccHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCceeecCCcccCCCCCccHHHHHHHHHHHH
Q 015082 3 FGSISNFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDSTYLPEAVLNIPPNPSMKEARKEAEAVM 82 (413)
Q Consensus 3 ~v~I~~ig~~lP~~~~~v~~~el~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~ma~~~~~~~~la 82 (413)
.++|.++|+|+|+ ++++|+|+.+.++. +++ +|.+++||++|+++.+++ + +.+|+
T Consensus 2 ~v~I~~~g~ylP~--~~v~~~el~~~~~~----~~~------~i~~~~Gi~~R~~~~~~~----~----------~~~la 55 (347)
T PRK04262 2 MVGIVGYGAYIPR--YRIKVEEIARVWGD----DPE------AIKRGLGVEEKSVPGPDE----D----------TATIA 55 (347)
T ss_pred ceeEEEEEEeCCC--EEecHHHHHHHhCc----CHH------HHhhccCeeeeecCCCCc----C----------HHHHH
Confidence 3799999999999 99999999988763 443 788999999999987664 2 46788
Q ss_pred HHHHHHHHHhCCCCCCCcCeEEEEc-cCCCCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHHcCCCCe
Q 015082 83 FGAIDELFAKTSVKPKDIGILIVNC-SLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSY 161 (413)
Q Consensus 83 ~~Aa~~aL~~ag~~~~~Id~li~~s-~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~~g~~~~ 161 (413)
.+|+++||+++|++++|||.||+++ ++++..|+.+.+++++||+++++++++++ ++|+|++.+|++|.++|++|+.++
T Consensus 56 ~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~~~~~~~dv~-~~C~~~~~aL~~A~~~i~sg~~~~ 134 (347)
T PRK04262 56 VEAARNALKRAGIDPKEIGAVYVGSESHPYAVKPTATIVAEALGATPDLTAADLE-FACKAGTAALQAAMGLVKSGMIKY 134 (347)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCcccccHHHHHHHHcCCCCCceEEEHH-HhHHHHHHHHHHHHHHHHcCCCCE
Confidence 9999999999999999999999886 46777888999999999998668899999 799999999999999999999999
Q ss_pred EEEEEEccccCCCccCCCccchhhhcccccCceEEEEecCCCCcccccceEeeeeeeecCCCCccccccccccCCCCcee
Q 015082 162 ALVISMENITLNWYFGNDRSKLVSNCLFRMGGAAILLSNRFSDRRRSKYRLVHTVRTHKGADDNCFACVTQEEDSEGKVG 241 (413)
Q Consensus 162 vLVv~~e~~s~~~~~~~d~~~~~~~~lfGDGAaA~ll~~~~~~~~~~~~~i~~~~~~~~~td~~~~~~~~~~~~~~g~~~ 241 (413)
||||++|+... ++.++.. .+|||||+|+||++++. .+++.+.. ...+++. +.+..........+
T Consensus 135 aLVv~~e~~~~---~~~~~~~----~~~GDGA~A~ll~~~~~-----~~~i~~~~--~~~~d~~--d~~~~~~~~~~~~~ 198 (347)
T PRK04262 135 ALAIGADTAQG---APGDALE----YTAAAGGAAFIIGKEEV-----IAEIEATY--SYTTDTP--DFWRREGEPYPRHG 198 (347)
T ss_pred EEEEEEeeecc---CCCCCCC----CcCCCCcEEEEEecCcc-----cceeeccc--cccccch--hhcCCCCCcCCCcC
Confidence 99999998422 3344432 46899999999997542 13333211 1112221 21111000000000
Q ss_pred eEecchhhHHhHHhhhhhhhhcCCCccchhHHHHHHHHHHHHHhhhhccCCCccchhccccEEEecCCChHHHHHHHHhc
Q 015082 242 VTLSKNLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNL 321 (413)
Q Consensus 242 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~al~~~~~~~~~did~~i~hq~~~~~~~~i~~~l 321 (413)
..++.+ + .+++. ..++++..+++ .+...+|||+|++||+|.++++.+++.|
T Consensus 199 ~~~~~~-~--------------------------~~~~~-~~~~i~~~L~~-~gl~~~dId~~v~Hq~n~~~~~~~~~~L 249 (347)
T PRK04262 199 GRFTGE-P--------------------------AYFKH-IISAAKGLMEK-LGLKPSDYDYAVFHQPNGKFPLRVAKML 249 (347)
T ss_pred ceecch-H--------------------------HHHHH-HHHHHHHHHHH-hCcCHHHhceeecCCCchHHHHHHHHHc
Confidence 001000 0 01110 11223333332 2334689999999999999999999999
Q ss_pred CCCcccchhhHHHHhhhcCCCcchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhhhhhhhhcc
Q 015082 322 QLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVWKALR 385 (413)
Q Consensus 322 gi~~e~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~l~~Gd~vll~~~G~G~~~~a~llr~~~ 385 (413)
|++++|+..+. ++++||||+|||+|++|+++++ ++++||++++++||+|++++++++||.+
T Consensus 250 gl~~ek~~~~~-~~~~~GNt~sAsi~~~L~~~~~--~~~~Gd~vll~~~G~G~~~~~~~~~~~~ 310 (347)
T PRK04262 250 GFTKEQVKPGL-LTPYIGNTYSGSALLGLAAVLD--VAKPGDRILVVSFGSGAGSDAFSITVTD 310 (347)
T ss_pred CCCHHHhhccc-hhhhhCChHHHHHHHHHHHHHH--hCCCCCEEEEEecCCCcceeeEEEEech
Confidence 99999984222 5799999999999999999987 4899999999999999999999999975
No 27
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=5.5e-44 Score=357.20 Aligned_cols=346 Identities=15% Similarity=0.139 Sum_probs=238.0
Q ss_pred eEEEEeeeeecCCCCccccHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCceeecCCcccCCCCCccHHHHHHHHHHHH
Q 015082 3 FGSISNFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDSTYLPEAVLNIPPNPSMKEARKEAEAVM 82 (413)
Q Consensus 3 ~v~I~~ig~~lP~~~~~v~~~el~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~ma~~~~~~~~la 82 (413)
.|+|.++|+|+|+ ++++|+++.+.++......+ +...+|++++||++||++.++... +.. ...+|+
T Consensus 2 ~v~I~gig~~lP~--~~v~n~~~~~~~~~~~~~~~---~~~~~i~~~~Gi~~R~~~~~~~~~--~~~-------~~~~La 67 (378)
T PRK06816 2 NVYITSTGAFLPG--EPVSNDEMEAYLGLINGKPS---RARRIILRNNGIKTRHYALDPEGR--PTH-------SNAQMA 67 (378)
T ss_pred CeEEEeeeecCCC--CccCHHHHHHHHhhccCCcH---HHHHHHHHhCCCceEEEEECCCCC--CCC-------CHHHHH
Confidence 4899999999999 99999999988875321111 123489999999999987543100 111 246888
Q ss_pred HHHHHHHHHhCCCCCCCcCeEEEEc-cCCCCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHHcCCCCe
Q 015082 83 FGAIDELFAKTSVKPKDIGILIVNC-SLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSY 161 (413)
Q Consensus 83 ~~Aa~~aL~~ag~~~~~Id~li~~s-~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~~g~~~~ 161 (413)
.+|+++||+++|++++|||.||+++ ++++..|+.+..|+++||++ .+++++++ ++|+|++.||++|..+|++|+.++
T Consensus 68 ~~A~~~aL~~agi~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~-~~~~~~v~-~~Cas~~~al~~A~~~i~sg~~~~ 145 (378)
T PRK06816 68 AEAIRDLLDDAGFSLGDIELLACGTSQPDQLMPGHASMVHGELGAP-PIEVVSSA-GVCAAGMMALKYAYLSVKAGESRN 145 (378)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEECCCCcCChHHHHHHHhhCCCC-CCceeeec-CcCHHHHHHHHHHHHHHHCCCCCE
Confidence 9999999999999999999999986 46777898899999999998 58999999 799999999999999999999999
Q ss_pred EEEEEEccccCCCccCCC------------ccc------hhhhcccccCceEEEEecCCCCcccccceEeeeeeeecCCC
Q 015082 162 ALVISMENITLNWYFGND------------RSK------LVSNCLFRMGGAAILLSNRFSDRRRSKYRLVHTVRTHKGAD 223 (413)
Q Consensus 162 vLVv~~e~~s~~~~~~~d------------~~~------~~~~~lfGDGAaA~ll~~~~~~~~~~~~~i~~~~~~~~~td 223 (413)
||||++|++|..+ ++.+ +.. -...++|||||+|+||++.+... ++.+ .+......++
T Consensus 146 vLvv~~E~~s~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fGDGA~A~vl~~~~~~~---g~~l-~~~~~~~~~~ 220 (378)
T PRK06816 146 AVATASELASRWF-RASRFEAEEEKLAELEENPEIAFEKDFLRWMLSDGAGAVLLENKPRPD---GLSL-RIDWIDLRSY 220 (378)
T ss_pred EEEEeEccchhhh-hhhhhhhHHHHhhcCcccCCCCCCCCCCCEeeecccEEEEEEecCCCC---CceE-EEEEEeeecc
Confidence 9999999998733 3211 100 00124799999999999766521 1111 1111111222
Q ss_pred CccccccccccCC---CCc-eeeE-ecchhhHHhHH-hhhhhhhhcCCCccchhHHHHHHHHHHHHHhhhhccCCCccch
Q 015082 224 DNCFACVTQEEDS---EGK-VGVT-LSKNLMAVAGD-ALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDF 297 (413)
Q Consensus 224 ~~~~~~~~~~~~~---~g~-~~~~-l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~al~~~~~~~ 297 (413)
+.+++.+....+. .+. .++. ...+.+...+. .++.+. ..+...+.....++++.++++ .+..
T Consensus 221 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~i~~~L~~-~gl~ 288 (378)
T PRK06816 221 AGELPVCMYAGAEKNEDGSLKGWSDYPPEEAEAASALSLKQDV-----------RLLNENIVVYTIKPLLELVDK-RNLD 288 (378)
T ss_pred cccCccceecCCccCCCCCccCcccCCHHHHHhccCchHHhHH-----------HHHHHHhHHHHHHHHHHHHHH-cCCC
Confidence 2222222111100 000 0000 00000000000 000000 000000000112233333333 3345
Q ss_pred hccccEEEecCCChHHHHHHHHhc-----CCCcccchhhHHHHhhhcCCCcchHHHHHHHHHHcCCCCCCCeEEEEeecc
Q 015082 298 KLAFEHFCIHAGGRAVLDELEKNL-----QLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGS 372 (413)
Q Consensus 298 ~~did~~i~hq~~~~~~~~i~~~l-----gi~~e~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~l~~Gd~vll~~~G~ 372 (413)
.+|||+|++||+|.++++.++++| |++++|+ +.++++|||+++||+|++|++++++|++++||+|++++.|+
T Consensus 289 ~~DId~~v~Hq~n~~~~~~v~~~l~~~~~gl~~~k~---~~~~~~~GNt~sAsipi~L~~a~~~g~~~~Gd~vl~~~~~s 365 (378)
T PRK06816 289 PDDIDYFLPHYSSEYFREKIVELLAKAGFMIPEEKW---FTNLATVGNTGSASIYIMLDELLNSGRLKPGQKILCFVPES 365 (378)
T ss_pred hhhCCEEeeCcccHHHHHHHHHHHHhccCCCChhhe---EEeccccccccchHHHHHHHHHHHcCCCCCCCEEEEEEecc
Confidence 799999999999999999999987 9999998 67999999999999999999999999999999999998876
Q ss_pred c-hhhhhhhhhhc
Q 015082 373 G-FKCNSAVWKAL 384 (413)
Q Consensus 373 G-~~~~a~llr~~ 384 (413)
| +++++++|+|.
T Consensus 366 ~~~~~~~~~~~~~ 378 (378)
T PRK06816 366 GRFSTAFMLLTVV 378 (378)
T ss_pred cchhheeEEEEEC
Confidence 5 99999999884
No 28
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=100.00 E-value=2.6e-44 Score=355.21 Aligned_cols=313 Identities=16% Similarity=0.152 Sum_probs=233.6
Q ss_pred EEEEeeeeecCCCCccccHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCceeecCCcccCCCCCccHHHHHHHHHHHHH
Q 015082 4 GSISNFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDSTYLPEAVLNIPPNPSMKEARKEAEAVMF 83 (413)
Q Consensus 4 v~I~~ig~~lP~~~~~v~~~el~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~ma~~~~~~~~la~ 83 (413)
++|.++|.|+|+ ++++|+++.+..+. +++ ++.+++||++|+++.+++ + +.+|++
T Consensus 2 ~~I~g~g~~lP~--~~v~n~~l~~~~~~----~~~------~i~~~~Gi~~r~v~~~~~----~----------~~~la~ 55 (345)
T TIGR00748 2 AGIVGYGAYIPM--YRIKVEEIARVWGK----DPE------SISNGLPVEEKAVPGLDE----D----------TATIGV 55 (345)
T ss_pred ccEEEEEEeCCC--eeecHHHHHHHhCC----CHh------HeeeccceeeeecCCCCC----C----------HHHHHH
Confidence 579999999999 99999999987653 443 788899999999987764 2 457779
Q ss_pred HHHHHHHHhCCCCCCCcCeEEEEc-cCCCCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHHcCCCCeE
Q 015082 84 GAIDELFAKTSVKPKDIGILIVNC-SLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYA 162 (413)
Q Consensus 84 ~Aa~~aL~~ag~~~~~Id~li~~s-~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~~g~~~~v 162 (413)
+|+++||+++|++++|||.||+++ ++++..|..+..++++||++++++++|++ ++|+|++.||.+|..+|++|..++|
T Consensus 56 ~Aa~~aL~~agl~~~dID~li~~s~~~~~~~p~~a~~v~~~LGl~~~~~~~dv~-~aC~g~~~al~~A~~~i~sg~~~~v 134 (345)
T TIGR00748 56 EAARNALKRAKIDPKDIGAVYVGSESHPYAVKPTATIVAEAIGATPDLTAADLE-FACKAGTAGIQACMGLVASGMIKYG 134 (345)
T ss_pred HHHHHHHHHcCCCHHHCCEEEEEecCCCccccchHHHHHHHcCCCCCceEEEHH-HhHHHHHHHHHHHHHHHHcCCCCEE
Confidence 999999999999999999999986 46777788999999999997678999999 6999999999999999999999999
Q ss_pred EEEEEccccCCCccCCCccchhhhcccccCceEEEEecCCCCcccccceEeeeeeeecCCCCc-cccccccccCCCCcee
Q 015082 163 LVISMENITLNWYFGNDRSKLVSNCLFRMGGAAILLSNRFSDRRRSKYRLVHTVRTHKGADDN-CFACVTQEEDSEGKVG 241 (413)
Q Consensus 163 LVv~~e~~s~~~~~~~d~~~~~~~~lfGDGAaA~ll~~~~~~~~~~~~~i~~~~~~~~~td~~-~~~~~~~~~~~~g~~~ 241 (413)
|||++|+++. ++.|+.. .+|||||+|+||++.+.. .++.+. ....+++. .+. ..+
T Consensus 135 LVv~~d~~~~---~~~~~~~----~~~GDGAaA~vl~~~~~~-----~~~~~~--~~~~~d~~~~~~----~~~------ 190 (345)
T TIGR00748 135 LAIGADTAQG---APGDALE----YTAGAGGAAYIIGEKNTV-----AYFEGT--YSYTTDTPDFWR----REG------ 190 (345)
T ss_pred EEEEEeeccc---CCCccCc----ccCCCceEEEEEccCCcc-----eEeecc--cceecccccccc----cCC------
Confidence 9999999764 2344432 578999999999975531 122111 11122221 111 000
Q ss_pred eEecchhhHHhHHhhhhhhhhcCCCccchhHHHHHHHHHHHHHhhhhccCCCccchhccccEEEecCCChHHHHHHHHhc
Q 015082 242 VTLSKNLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNL 321 (413)
Q Consensus 242 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~al~~~~~~~~~did~~i~hq~~~~~~~~i~~~l 321 (413)
.. .+..... + ... ..+++.. .++++..+++ .+...+|||+|++||+|.++++.+.+.|
T Consensus 191 ~~----~~~~~~~-~--------------~~~-~~~~~~~-~~~~~~~L~~-~gl~~~did~~i~Hq~~~~~~~~~~~~l 248 (345)
T TIGR00748 191 EP----YPRHGGR-F--------------TGE-PAYFHHV-VTAAKGLMEK-LGLTPEDFDYAVFHQPNGKFYLVAARML 248 (345)
T ss_pred Cc----CCCcCCe-e--------------cCh-HHHHHHH-HHHHHHHHHH-cCCCHHHcCEEEeCCCChHHHHHHHHHc
Confidence 00 0000000 0 000 0011110 1223333332 2334689999999999999999999999
Q ss_pred CCCcccchhhHHH--HhhhcCCCcchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhhhhhhhhccccCCcccCCCcc
Q 015082 322 QLSDWHMEPSRMT--LYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVWKALRSINSAKEKNPWM 397 (413)
Q Consensus 322 gi~~e~~~~s~~~--l~~~Gn~~sasi~i~L~~~~~~g~l~~Gd~vll~~~G~G~~~~a~llr~~~~~~~~~~~~~~~ 397 (413)
|++++|+. .+ .++|||+++||+|++|+++++ ++++||+|++++||+|++|+++++||.+ ..+...||+
T Consensus 249 gl~~ek~~---~~~~~~~~GNt~sAsipl~L~~~~~--~~~~Gd~vll~~~G~G~s~~~~~~~~~~---~~~~~~~~~ 318 (345)
T TIGR00748 249 GFPKEQVK---PGLLTPRIGNTYSGATPVGLSAVLD--IAEPGDRILAVSYGSGAGSDAFSIVVQD---AIEEKRDLA 318 (345)
T ss_pred CCCHHHee---ccccccccCchhhhHHHHHHHHHHH--hcCCCCEEEEEEecCCcceeEEEEEEch---hHHHHhhhh
Confidence 99999984 43 489999999999999999986 6899999999999999999999999975 233344564
No 29
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=1.2e-42 Score=347.27 Aligned_cols=346 Identities=14% Similarity=0.167 Sum_probs=236.0
Q ss_pred eEEEEeeeeecCCCCccccHHHHHHHHHhcC-CCChhh---H----------HHHHHHHHHcCCCceeecCCcc-cC--C
Q 015082 3 FGSISNFSCYKPEESRKCTKRIFMDQSRMTG-TFTEEN---L----------QFQKKILERSGLGDSTYLPEAV-LN--I 65 (413)
Q Consensus 3 ~v~I~~ig~~lP~~~~~v~~~el~~~~~~~~-~~~~~~---~----------~~~~~i~~~~GI~~R~~~~~~~-~~--~ 65 (413)
.++|.++|+|+|+ ++++|+|+.+.++... .++.+. . ...++|++++||++||++.+.. .. .
T Consensus 2 ~~~I~~~g~~lP~--~~v~n~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~ 79 (372)
T PRK07515 2 NVVISGTGLYTPP--ESISNEELVASFNAYVERFNAENAAAIAAGEVEALQPSSSEFIEKASGIKSRYVMDKEGILDPDR 79 (372)
T ss_pred CcEEEEEEeecCC--ccccHHHHHHHHhhhhhhhcccchhhhccccccccCCCCHHHhhhccCCceEEEecccccCcccc
Confidence 4789999999999 9999999998864321 011000 0 0145888999999999875310 00 0
Q ss_pred C-C--CccHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcCeEEEEcc-CCCCCCChHHHHHHHcCCCCCcceEEecCccch
Q 015082 66 P-P--NPSMKEARKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNIISYNLGGMGCS 141 (413)
Q Consensus 66 ~-~--~~~ma~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~-~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~ 141 (413)
. + ..++......+.+|+.+|+++||+++|+++++||.||++++ +++..|+.+..|++.||++ .++++++ ++|+
T Consensus 80 ~~~~~~~r~~~~~~~~~~la~~Aa~~aL~~agl~~~~Id~li~~~~~~~~~~p~~a~~v~~~Lgl~--~~~~~v~-~aCa 156 (372)
T PRK07515 80 MRPRIPERSNDELSIQAEMGVAAARQALARAGRTAEDIDAVIVACSNMQRAYPAMAIEIQQALGIE--GFAFDMN-VACS 156 (372)
T ss_pred cCcccccccccchhhHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhcCCC--CcEEEec-chhH
Confidence 0 0 00111112346789999999999999999999999999874 5677899999999999996 6889999 7999
Q ss_pred hHHHHHHHHHHHHHcCCCCeEEEEEEccccCCCccCCCccchhhhcccccCceEEEEecCCCCcccccceEeeeeeeecC
Q 015082 142 AGLISIDLANNLLQVHPNSYALVISMENITLNWYFGNDRSKLVSNCLFRMGGAAILLSNRFSDRRRSKYRLVHTVRTHKG 221 (413)
Q Consensus 142 ~~~~al~~A~~~i~~g~~~~vLVv~~e~~s~~~~~~~d~~~~~~~~lfGDGAaA~ll~~~~~~~~~~~~~i~~~~~~~~~ 221 (413)
|++.||.+|.++|++|.+++||||++|.++. +.++.|+.+ ..+|||||+|+||++.+....++.+++++. ...
T Consensus 157 sg~~al~~A~~~i~~g~~~~vLvv~~e~~s~-~~~~~d~~~---~~lfGDgAaA~vL~~~~~~~~~~~~~il~~---~~~ 229 (372)
T PRK07515 157 SATFGIQTAANAIRSGSARRVLVVNPEICSG-HLNFRDRDS---HFIFGDVATAVIVERADTATSAGGFEILGT---RLF 229 (372)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEeeecccc-cccccCCCC---CEEecCccEEEEEeeccccccCCCceEEEE---Eee
Confidence 9999999999999999999999999999987 445566643 478999999999998654311123444432 222
Q ss_pred CCCccccccccccCCCCceeeEecchhhHHhHHhhhhhhhhcCCCccchhHHHHHHHHHHHHHhhhhccCCCccchhccc
Q 015082 222 ADDNCFACVTQEEDSEGKVGVTLSKNLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDFKLAF 301 (413)
Q Consensus 222 td~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~al~~~~~~~~~di 301 (413)
++ +.+.+..+.+ . ......+.+......| ...|. .-+..+.. ...++++.++++ .+...+||
T Consensus 230 ~~--~~~~~~~~~G---~-~~~~~~~~~~~~~~~~----~~~g~------~~~~~~~~-~~~~~i~~~L~~-~gl~~~dI 291 (372)
T PRK07515 230 TQ--FSNNIRNNFG---F-LNRADPEGIGARDKLF----VQEGR------KVFKEVCP-MVAEHIVEHLAE-NGLTPADV 291 (372)
T ss_pred cc--cccceecCCC---C-CCCCCccccccccceE----EeccH------HHHHHHHH-HHHHHHHHHHHH-cCCCHHHC
Confidence 21 1122111110 0 0000000000000000 00000 00111111 112334444443 34457999
Q ss_pred cEEEecCCChHHHHHHHHh-cCC--CcccchhhHHHHhhhcCCCcchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhhh
Q 015082 302 EHFCIHAGGRAVLDELEKN-LQL--SDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNS 378 (413)
Q Consensus 302 d~~i~hq~~~~~~~~i~~~-lgi--~~e~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~l~~Gd~vll~~~G~G~~~~a 378 (413)
|+|++||+|.++++.+.++ ||+ +.++. +.++++||||+||++|++|+++. +++++||++++++||+|++|++
T Consensus 292 d~~~~Hq~~~~~~d~~~~~llg~~~~~~~~---~~~~~~~GNt~sasi~~~L~~~~--~~~~~Gd~vll~~~G~G~~~~~ 366 (372)
T PRK07515 292 KRFWLHQANINMNQLIGKKVLGRDATPEEA---PVILDEYANTSSAGSIIAFHKHS--DDLAAGDLGVICSFGAGYSIGS 366 (372)
T ss_pred CEEEECCCCHHHHHHHHHHhccCCCChhhc---eEeHHhcCCchhhHHHHHHHHHh--ccCCCCCEEEEEEecccHHHHH
Confidence 9999999999999999988 565 44554 57899999999999999999985 4789999999999999999999
Q ss_pred hhhhh
Q 015082 379 AVWKA 383 (413)
Q Consensus 379 ~llr~ 383 (413)
++||.
T Consensus 367 ~ll~~ 371 (372)
T PRK07515 367 VIVRK 371 (372)
T ss_pred HHhcc
Confidence 99985
No 30
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=100.00 E-value=5e-41 Score=329.36 Aligned_cols=320 Identities=20% Similarity=0.240 Sum_probs=233.8
Q ss_pred EEEEeeeeecCCCCccccHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCceeecCCcccCCCCCccHHHHHHHHHHHHH
Q 015082 4 GSISNFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDSTYLPEAVLNIPPNPSMKEARKEAEAVMF 83 (413)
Q Consensus 4 v~I~~ig~~lP~~~~~v~~~el~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~ma~~~~~~~~la~ 83 (413)
++|.++++|+|+ ++++|+++.+.++. + ++..++||++|++..+++ + ..+|+.
T Consensus 2 v~I~~i~~~lP~--~~v~~~~~~~~~~~----~--------~~~~~~gi~~r~~~~~~~----~----------~~~l~~ 53 (324)
T cd00827 2 VGIEAIGAYLPR--YRVDNEELAEGLGV----D--------PGKYTTGIGQRHMAGDDE----D----------VPTMAV 53 (324)
T ss_pred ccEEEEEecCCc--eeecHHHHHHHhCC----C--------cceeeeecceeEecCCCC----C----------HHHHHH
Confidence 689999999999 99999999987753 1 566789999999987643 2 467889
Q ss_pred HHHHHHHHhCCCCCCCcCeEEEEcc-CCCCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHHcCCCCeE
Q 015082 84 GAIDELFAKTSVKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYA 162 (413)
Q Consensus 84 ~Aa~~aL~~ag~~~~~Id~li~~s~-~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~~g~~~~v 162 (413)
+|++++|+++|+++++||.||++++ +....|+.+.+++++||++ ++++++++ ++|++++.||.+|.++|++|..+++
T Consensus 54 ~a~~~aL~~ag~~~~~Id~li~~~~~~~~~~~~~~~~i~~~lg~~-~~~~~~v~-~~C~s~~~al~~A~~~i~~g~~~~v 131 (324)
T cd00827 54 EAARRALERAGIDPDDIGLLIVATESPIDKGKSAATYLAELLGLT-NAEAFDLK-QACYGGTAALQLAANLVESGPWRYA 131 (324)
T ss_pred HHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCccHHHHHHHHcCCC-CCceeehh-hhhHHHHHHHHHHHHHHHcCCCCEE
Confidence 9999999999999999999999864 5555788999999999998 79999999 7999999999999999999999999
Q ss_pred EEEEEccccCCCccCCCccchhhhcccccCceEEEEecCCCCcccccceEeeeeeeecCCCCccccccccccCCCCceee
Q 015082 163 LVISMENITLNWYFGNDRSKLVSNCLFRMGGAAILLSNRFSDRRRSKYRLVHTVRTHKGADDNCFACVTQEEDSEGKVGV 242 (413)
Q Consensus 163 LVv~~e~~s~~~~~~~d~~~~~~~~lfGDGAaA~ll~~~~~~~~~~~~~i~~~~~~~~~td~~~~~~~~~~~~~~g~~~~ 242 (413)
||+++|.++... ...... .++|||||+|+||++.+... .+++. .+...+++.+++. +.+.- .+....
T Consensus 132 lvv~~e~~~~~~-~~~~~~----~~~~gdgaaA~ll~~~~~~~---~~~i~---~~~~~~~~~~~~~-~~~~~-~~~~~~ 198 (324)
T cd00827 132 LVVASDIASYLL-DEGSAL----EPTLGDGAAAMLVSRNPGIL---AAGIV---STHSTSDPGYDFS-PYPVM-DGGYPK 198 (324)
T ss_pred EEEEEHHhhhcc-cCCCCc----cccccCceEEEEEecCcccc---cCCce---eeeeecccccccC-cccee-ccCCCc
Confidence 999999988732 212222 47999999999999876520 12333 3344455544320 00000 000000
Q ss_pred EecchhhHHhHHhhhhhhhhcCCCccchhHHHHHHHHHHHHHhhhhccCCCccchhccccEEEecCCCh-HHHHHHHHhc
Q 015082 243 TLSKNLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDFKLAFEHFCIHAGGR-AVLDELEKNL 321 (413)
Q Consensus 243 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~al~~~~~~~~~did~~i~hq~~~-~~~~~i~~~l 321 (413)
+.. ......|..+. .. ..+.+ .+.. ...++++.++.+ .+.. +||++|++||+|+ .+++.+++.|
T Consensus 199 ~~~----~~~~~~~~~~~----~~-~~~~~---~~~~-~~~~~~~~~l~~-~~~~-~~i~~~~~h~~~~~~~~~~~~~~l 263 (324)
T cd00827 199 PCK----LAYAIRLTAEP----AG-RAVFE---AAHK-LIAKVVRKALDR-AGLS-EDIDYFVPHQPNGKKILEAVAKKL 263 (324)
T ss_pred chh----hhhhcceeecC----Cc-cchHH---HHhH-HHHHHHHHHHHH-cccc-cccceeeccCchHHHHHHHHHHHc
Confidence 000 00000000000 00 00000 0111 112334444443 2223 7999999999999 9999999999
Q ss_pred CCCcccchhhHH-HHhhhcCCCcchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhhhhhh
Q 015082 322 QLSDWHMEPSRM-TLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVW 381 (413)
Q Consensus 322 gi~~e~~~~s~~-~l~~~Gn~~sasi~i~L~~~~~~g~l~~Gd~vll~~~G~G~~~~a~ll 381 (413)
+++.+++..+.. ++++|||+++|++|++|+++++++++++||+|+++++|+|++|+++++
T Consensus 264 ~~~~~~~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~~~~~~~Gd~vl~~~~G~G~~~~~~~~ 324 (324)
T cd00827 264 GGPPEKASQTRWILLRRVGNMYAASILLGLASLLESGKLKAGDRVLLFSYGSGFTAEAFVL 324 (324)
T ss_pred cchHhhhccchhhHHHHhCchHHHHHHHHHHHHHhcCCCCCCCEEEEEEeccchhheeccC
Confidence 999888864443 899999999999999999999999999999999999999999998764
No 31
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane
Probab=100.00 E-value=3.6e-40 Score=308.83 Aligned_cols=281 Identities=67% Similarity=1.099 Sum_probs=260.1
Q ss_pred eEEEEeeeeecCCCCccccHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCceeecCCcccCCCCCccHHHHHHHHHHHH
Q 015082 3 FGSISNFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDSTYLPEAVLNIPPNPSMKEARKEAEAVM 82 (413)
Q Consensus 3 ~v~I~~ig~~lP~~~~~v~~~el~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~ma~~~~~~~~la 82 (413)
.||++..++|.|++.++++.+.+.+.....+.++++.+++.++|.+++||.++.+.++..+..++..+|..+++++..++
T Consensus 8 ~VYLvDfac~kP~~~~~v~~~~~~e~~~~~~~f~~~sl~F~~kIlerSGlG~eTy~P~~~~~~p~~~s~~~a~~Eae~v~ 87 (290)
T PF08392_consen 8 PVYLVDFACYKPPDELRVSREEFIEHARRCGRFDEESLDFQRKILERSGLGDETYLPPALHEIPPDPSLAAAREEAEMVI 87 (290)
T ss_pred CEEEEeeeecCCCcccccCHHHHHHHHHhcccCChhHHHHHHHHHHhcCCCccccCCcccccCCCcccHHHHHHHHHHHH
Confidence 48999999999998889999999999998888999999999999999999999998876655456789999999999999
Q ss_pred HHHHHHHHHhCCCCCCCcCeEEEEccCCCCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHHcCCCCeE
Q 015082 83 FGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYA 162 (413)
Q Consensus 83 ~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~~g~~~~v 162 (413)
..|++++|+++|++|+|||.||+.|+.+++.|+++.+|.+++|++.++..+++.|+||++++.++++|.++++..+..+|
T Consensus 88 f~av~~LL~ktgv~p~dIdiLVvncs~f~ptPSLsamIvnr~~mr~di~~~nLsGMGCsAgliai~lA~~lL~~~p~~~A 167 (290)
T PF08392_consen 88 FGAVDDLLAKTGVKPSDIDILVVNCSLFNPTPSLSAMIVNRYGMRSDIKSYNLSGMGCSAGLIAIDLAKDLLQAHPNSYA 167 (290)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECcCCCcCCcHHHHHHHHhCCCcCeeeecccCCcchhhHHHHHHHHHHHHhCCCcEE
Confidence 99999999999999999999999998888999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEccccCCCccCCCccchhhhcccccCceEEEEecCCCCcccccceEeeeeeeecCCCCccccccccccCCCCceee
Q 015082 163 LVISMENITLNWYFGNDRSKLVSNCLFRMGGAAILLSNRFSDRRRSKYRLVHTVRTHKGADDNCFACVTQEEDSEGKVGV 242 (413)
Q Consensus 163 LVv~~e~~s~~~~~~~d~~~~~~~~lfGDGAaA~ll~~~~~~~~~~~~~i~~~~~~~~~td~~~~~~~~~~~~~~g~~~~ 242 (413)
|||++|.+|.+|+..+||..+++++||+|||+|+||++.+....+..|++.+.+.++...+.+.|..+++.+|.+|..|+
T Consensus 168 LVVstE~~s~~~Y~G~~rsmlv~NcLFr~GgAAvLLSn~~~~~~~aky~L~~~vRt~~g~~d~ay~~v~q~eD~~g~~Gv 247 (290)
T PF08392_consen 168 LVVSTENISANWYRGNDRSMLVSNCLFRMGGAAVLLSNKPSDRRRAKYELLHTVRTHTGADDDAYRCVFQEEDEEGIVGV 247 (290)
T ss_pred EEEEEeecccccccCCcHHHhhccccccCCceeEEeecCccccccchhhhhheeeeecCCCCCceeeEEEeEcCCCceEE
Confidence 99999999998888889998889999999999999999888666678999999999888888889999999999999999
Q ss_pred EecchhhHHhHHhhhhhhhhcCCCccchhHHHHHHHHHHHH
Q 015082 243 TLSKNLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGK 283 (413)
Q Consensus 243 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (413)
.++++++.+.++.++.|++.+||.+.|++|.+.+.+.+..+
T Consensus 248 ~lsk~l~~vag~al~~ni~~l~p~vLP~sE~~~~~~~~~~r 288 (290)
T PF08392_consen 248 SLSKDLMKVAGKALKANITTLGPLVLPLSEQLRFAASFIAR 288 (290)
T ss_pred EEecchHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999987765554433
No 32
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=100.00 E-value=7.7e-39 Score=319.78 Aligned_cols=307 Identities=16% Similarity=0.153 Sum_probs=223.9
Q ss_pred EEEEeeeeecCCCCccccHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCceeecCCcccCCCCCccHHHHHHHHHHHHH
Q 015082 4 GSISNFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDSTYLPEAVLNIPPNPSMKEARKEAEAVMF 83 (413)
Q Consensus 4 v~I~~ig~~lP~~~~~v~~~el~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~ma~~~~~~~~la~ 83 (413)
|+|.+++.|+|+ ++++++++.+..+. +++ ++...+|+++|++..++| + +.+|++
T Consensus 1 iGI~~i~~y~P~--~~v~~~ela~~~g~----~~~------~~~~g~G~~~~~~~~~~e----d----------~~~la~ 54 (379)
T TIGR01835 1 IGIDKISFFTPQ--NYLDMTALAEARGV----DPE------KFHIGIGQKKMAVPPIDE----D----------IVTMAA 54 (379)
T ss_pred CCEeEEEEECCC--EEeeHHHHHHHhCC----CHH------HHHhhcCceEEeeCCCCC----C----------HHHHHH
Confidence 589999999999 99999999987763 554 777899999999987764 2 356779
Q ss_pred HHHHHHHHhCCCCCCCcCeEEEEc-cCCCCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHHcCCCCeE
Q 015082 84 GAIDELFAKTSVKPKDIGILIVNC-SLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYA 162 (413)
Q Consensus 84 ~Aa~~aL~~ag~~~~~Id~li~~s-~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~~g~~~~v 162 (413)
+|+++||+++ ++++||.|+++| ++++..|+.+..|+++||++++++++|+. ++|+|++.||++|.++|++|+.++|
T Consensus 55 ~Aa~~aL~~a--~~~~Id~li~~t~s~~~~~~s~a~~v~~~Lgl~~~~~~~dv~-~aC~gg~~aL~~A~~~i~s~~~~~a 131 (379)
T TIGR01835 55 SAAKPILDRN--DKQKIDMVIFGTESGIDQSKAAAVYVHGLLGLQPFCRSFELK-QACYGATAALQMAKGHVALSPDRKV 131 (379)
T ss_pred HHHHHHHHhC--CHhhCCEEEEEeCCCCCCCCCHHHHHHHHhCCCCCceEEEec-cccHHHHHHHHHHHHHHHcCCCCeE
Confidence 9999999998 899999999997 46677899999999999998779999999 7999999999999999999999999
Q ss_pred EEEEEccccCCCccCCCccchhhhcccccCceEEEEecCCCCcccccceEeeee-eeecCCCCccccccccccCCCCcee
Q 015082 163 LVISMENITLNWYFGNDRSKLVSNCLFRMGGAAILLSNRFSDRRRSKYRLVHTV-RTHKGADDNCFACVTQEEDSEGKVG 241 (413)
Q Consensus 163 LVv~~e~~s~~~~~~~d~~~~~~~~lfGDGAaA~ll~~~~~~~~~~~~~i~~~~-~~~~~td~~~~~~~~~~~~~~g~~~ 241 (413)
|||++|.... .. .+.. ..+|||||+|+||++++. +..+. .+...++.. ++ ++.|.+.
T Consensus 132 LVv~~D~a~~--~~-~~~~----~~~~GdGA~A~Ll~~~~~--------i~~~~~~~~~~t~~~-~d-f~~p~~~----- 189 (379)
T TIGR01835 132 LVIASDIAKY--GL-ESPG----EPTQGAGAVAMLVSADPK--------LLAINEDSVLYTDDI-MD-FWRPNYS----- 189 (379)
T ss_pred EEEEeehhhc--cc-CCCC----CccccCccEEEEEecCCC--------eeEEeccceeeecCC-CC-ccCCCCC-----
Confidence 9999998443 11 1222 257999999999997643 11111 111122211 11 1222110
Q ss_pred eEecchhhHHhHHhhhhhhhhcCCCccchhHHHHHHHHHHHHHhhhhccCCCccchhccccEEEecCCChHH----HHHH
Q 015082 242 VTLSKNLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDFKLAFEHFCIHAGGRAV----LDEL 317 (413)
Q Consensus 242 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~al~~~~~~~~~did~~i~hq~~~~~----~~~i 317 (413)
..|.+.++. ....|++.. .++++..+++ .+...+|||+|++||++.++ ++.+
T Consensus 190 -----~~~~v~g~~-----------------s~~~y~~~~-~~~~~~~l~~-~g~~~~did~~i~H~p~~~~~~k~~~~~ 245 (379)
T TIGR01835 190 -----TTALVDGQY-----------------SNEQYLNAF-ENAWNDYAKR-TGLSLADFAAFCFHVPFTKMGLKALRHI 245 (379)
T ss_pred -----CceeECcHH-----------------HHHHHHHHH-HHHHHHHHHH-hCCCHHHcCEEEECCCCCcHHHHHHHHH
Confidence 011111110 011222211 2334433333 33457899999999998877 3446
Q ss_pred HHhcCCCc-ccc----hhhHHHHhhhcCCCcchHHHHHHHHHHcC-CCCCCCeEEEEeeccchhhhhhhhhhcc
Q 015082 318 EKNLQLSD-WHM----EPSRMTLYRFGNTSSSSLWYELAYSEAKG-RIKKGDRTWQIAFGSGFKCNSAVWKALR 385 (413)
Q Consensus 318 ~~~lgi~~-e~~----~~s~~~l~~~Gn~~sasi~i~L~~~~~~g-~l~~Gd~vll~~~G~G~~~~a~llr~~~ 385 (413)
.+.++++. +++ ..|+.+.+++||+++||+|++|+++++++ ++++||+|+|++||+|+......++..+
T Consensus 246 l~~~~~~~~~~~~~~~~~s~~~~~~~GN~~sas~~l~L~~~l~~~~~~~~Gd~ill~s~GsG~~ae~~~~~~~~ 319 (379)
T TIGR01835 246 LKKNYEDEDESVQNAYLESIIYNREVGNLYTGSLYLGLASLLENAFEDTTGDKIGLFSYGSGAVAEFFSGTLVA 319 (379)
T ss_pred HhhcccccHHHHHHHhhhhhhhhhhcCchHhHHHHHHHHHHHHhcccCCCCCEEEEEEecCCcceeeEEEEEcc
Confidence 66777773 222 23456899999999999999999999885 7899999999999999887777766644
No 33
>PLN02577 hydroxymethylglutaryl-CoA synthase
Probab=100.00 E-value=1.5e-35 Score=298.55 Aligned_cols=308 Identities=16% Similarity=0.203 Sum_probs=218.5
Q ss_pred eEEEEeeeeecCCCCccccHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCceeec--CCcccCCCCCccHHHHHHHHHH
Q 015082 3 FGSISNFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDSTYL--PEAVLNIPPNPSMKEARKEAEA 80 (413)
Q Consensus 3 ~v~I~~ig~~lP~~~~~v~~~el~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~--~~~~~~~~~~~~ma~~~~~~~~ 80 (413)
.++|.++|.|+|+ ++|+|+|+.+..+. +++ |+ .+||.+|+++ .++| + +.+
T Consensus 4 ~vgI~gig~Y~P~--~~v~n~eLa~~~g~----~~~------~~--~~GI~~r~~ava~~~E----d----------~~t 55 (459)
T PLN02577 4 NVGILAMEVYFPP--TCVQQEALEAHDGV----SKG------KY--TIGLGQDCMAFCTDVE----D----------VIS 55 (459)
T ss_pred ccEEEEEEEeCCC--eEEcHHHHHHHhCC----CHH------HH--hhccceeEeccCCCCC----C----------HHH
Confidence 4799999999999 99999999988764 554 55 5899999864 3443 2 456
Q ss_pred HHHHHHHHHHHhCCCCCCCcCeEEEEc-cCCCCCCChHHHHH---HHcCCCCCcceEEecCccchhHHHHHHHHHHHHHc
Q 015082 81 VMFGAIDELFAKTSVKPKDIGILIVNC-SLFNPTPSLSAMVI---NHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQV 156 (413)
Q Consensus 81 la~~Aa~~aL~~ag~~~~~Id~li~~s-~~~~~~p~~a~~v~---~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~~ 156 (413)
||++|++++|+++|+++++||+||++| +++...|+++..|+ ++||.+ ++.+||++ ++|.||+.||++|.++|++
T Consensus 56 mA~~AA~~aL~~agid~~~IdllivaTeT~~d~~ps~A~~v~~ll~~LG~~-~~~afDi~-~AC~G~~~AL~~A~~~i~s 133 (459)
T PLN02577 56 MSLTVVKSLLEKYNIDPKQIGRLEVGSETVIDKSKSIKTFLMQLFEESGNT-DIEGVDST-NACYGGTAALLNCVNWVES 133 (459)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCchHHHHHHHHHHhCCC-CcEEeehh-hhhHHHHHHHHHHHHHHHc
Confidence 779999999999999999999999997 56677999998886 678886 79999999 7999999999999999999
Q ss_pred CC--CCeEEEEEEccccCCCccCCCccchhhhcccccCceEEEEecCCCCcccccceEeeeeeeec-CCCCccccccccc
Q 015082 157 HP--NSYALVISMENITLNWYFGNDRSKLVSNCLFRMGGAAILLSNRFSDRRRSKYRLVHTVRTHK-GADDNCFACVTQE 233 (413)
Q Consensus 157 g~--~~~vLVv~~e~~s~~~~~~~d~~~~~~~~lfGDGAaA~ll~~~~~~~~~~~~~i~~~~~~~~-~td~~~~~~~~~~ 233 (413)
|. .++||||++|..+.. ..+ .+ .++||||+|+||++++.. .+.... .+.+.....++.|
T Consensus 134 g~~~~~~aLVV~aD~a~~~-~~~-~e------~t~GdGA~A~lv~~~~~~----------~l~~~~~g~~~~~~~Df~rP 195 (459)
T PLN02577 134 SSWDGRYGLVVAADSAVYA-EGP-AR------PTGGAGAVAMLVGPNAPI----------VFESKYRGSHMAHVYDFYKP 195 (459)
T ss_pred CCCCCCeEEEEEechhhcc-CCC-CC------CCCCcceEEEEEccCCCc----------eeecccccccCcccchhccc
Confidence 86 599999999996652 222 22 357999999999975431 111111 1222111223333
Q ss_pred cCCCCceeeEecchhhHHhHHhhhhhhhhcCCCccchhHHHHHHHHHHHHHhhhhccCCC-----ccchhccccEEEecC
Q 015082 234 EDSEGKVGVTLSKNLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPY-----IPDFKLAFEHFCIHA 308 (413)
Q Consensus 234 ~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~al~~~-----~~~~~~did~~i~hq 308 (413)
.... +.|.+.|+. .+..|++.. .++++..+++. .+...+|+|++++||
T Consensus 196 ~~~~---------~~~~vdG~~-----------------s~~~yl~~~-~~~~~~~~~k~~~~~~~g~~~~d~d~~vfHq 248 (459)
T PLN02577 196 DLAS---------EYPVVDGKL-----------------SQTCYLMAL-DSCYKRFCEKYEKLEGKQFSISDADYFVFHA 248 (459)
T ss_pred CCCC---------CceEEcchH-----------------HHHHHHHHH-HHHHHHHHHHhhcccccCCCHHHcCEEEecC
Confidence 2210 112222210 011222211 11222211110 133478999999999
Q ss_pred CChHHHHHHHHhcCCC----------------------------------------------cccchhhHHHHhhhcCCC
Q 015082 309 GGRAVLDELEKNLQLS----------------------------------------------DWHMEPSRMTLYRFGNTS 342 (413)
Q Consensus 309 ~~~~~~~~i~~~lgi~----------------------------------------------~e~~~~s~~~l~~~Gn~~ 342 (413)
+..+|.+.-.++|.+. .+|+.+|...-+++||++
T Consensus 249 P~~km~~ka~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kv~ps~~~~~~vGN~Y 328 (459)
T PLN02577 249 PYNKLVQKSFARLVYNDFQRNASSVDEDAKEKLAPFAGLSSDESYQNRDLEKVSQQVAKPLYDAKVQPTTLIPKQVGNMY 328 (459)
T ss_pred CccchhHHHHHHHhhhhhhhccccccchhhhccccccccchhhccccchHHHHHHHhhHHHHHHhhccHhHHHHhcCccc
Confidence 9888877765554311 145555666788999999
Q ss_pred cchHHHHHHHHHHcCC-CCCCCeEEEEeeccchhhhhhhhhhcc
Q 015082 343 SSSLWYELAYSEAKGR-IKKGDRTWQIAFGSGFKCNSAVWKALR 385 (413)
Q Consensus 343 sasi~i~L~~~~~~g~-l~~Gd~vll~~~G~G~~~~a~llr~~~ 385 (413)
++|+++.|..+++... ..+|++|+++|||+|......-+++.+
T Consensus 329 TaSlyl~L~SlL~~~~~~~~G~rIg~fSYGSG~~se~fs~~v~~ 372 (459)
T PLN02577 329 TASLYAALASLVHNKHSELAGKRILMFSYGSGLTATMFSLRLHE 372 (459)
T ss_pred chHHHHHHHHHHhhccccCCCCEEEEEeecCCccceeEEEEEeC
Confidence 9999999999997542 449999999999999888777776664
No 34
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=100.00 E-value=9.6e-35 Score=280.01 Aligned_cols=315 Identities=18% Similarity=0.194 Sum_probs=237.4
Q ss_pred eEEEEeeeeecCCCCccccHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCceeecCCcccCCCCCccHHHHHHHHHHHH
Q 015082 3 FGSISNFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDSTYLPEAVLNIPPNPSMKEARKEAEAVM 82 (413)
Q Consensus 3 ~v~I~~ig~~lP~~~~~v~~~el~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~ma~~~~~~~~la 82 (413)
.++|.+++.|+|. ++|+++|+.+..+. +++ ++...+|+++|.+.+.+| ++..||
T Consensus 2 ~iGI~~~g~y~p~--~~i~~~ela~~~g~----d~~------k~~~gl~~~e~sv~~~~E--------------D~vTma 55 (377)
T COG3425 2 MIGIVGIGAYIPR--YRIKLEELARAWGV----DPE------KIKKGLGVEEKSVPPWDE--------------DAVTMA 55 (377)
T ss_pred ccccceEEEeccc--eEeeHHHHHhhcCC----ChH------HhhhccccccccCCCCch--------------hHHHHH
Confidence 3689999999999 99999999988764 444 777889999999988774 356667
Q ss_pred HHHHHHHHHhCCCCCCCcCeEEEEc-cCCCCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHHcCCCCe
Q 015082 83 FGAIDELFAKTSVKPKDIGILIVNC-SLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSY 161 (413)
Q Consensus 83 ~~Aa~~aL~~ag~~~~~Id~li~~s-~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~~g~~~~ 161 (413)
++||+++|+++++|+.+|+.|+++| +..+....++..|++.||+.+++.++|+. .+|.++..||++|..++.+|+.+.
T Consensus 56 veAA~~~l~r~~~D~~~Ig~v~vgTES~~d~~K~~at~v~~~lg~~~~~~~~d~~-~AC~agT~aL~~a~~~v~s~~~~~ 134 (377)
T COG3425 56 VEAARNALKRADIDPSKIGAVIVGSESGPDAVKPTATIVAEALGLNPSARAADVE-FACYAGTAALQAAIGWVESGMISY 134 (377)
T ss_pred HHHHHHHHhccCCCHHHCceEEEecCCCcccccchHHHHHHHhCCCCceehhhHH-HHHHHHHHHHHHHHHHHHcCCccc
Confidence 9999999999999999999999997 44456788999999999999999999999 699999999999999999999999
Q ss_pred EEEEEEccccCCCccCCCccchhhhcccccCceEEEEecCCCCcccccceEeeeeeeecCCCCccccccccccCCCCcee
Q 015082 162 ALVISMENITLNWYFGNDRSKLVSNCLFRMGGAAILLSNRFSDRRRSKYRLVHTVRTHKGADDNCFACVTQEEDSEGKVG 241 (413)
Q Consensus 162 vLVv~~e~~s~~~~~~~d~~~~~~~~lfGDGAaA~ll~~~~~~~~~~~~~i~~~~~~~~~td~~~~~~~~~~~~~~g~~~ 241 (413)
+|||++|+.-. .+.+..+ .+.|+||+|+||++.+.. ...+.+ ....+.. ...++.|.+.
T Consensus 135 ~LvI~sD~a~~---~~~~~~E----~t~GAGavA~lIg~n~~~----~a~~~~---~~syt~d--~~DFwRp~~~----- 193 (377)
T COG3425 135 GLVIGADTAQY---APGDALE----YTAGAGAVAFLIGKNPPI----VAEFEG---TGSYTTD--TPDFWRPDGQ----- 193 (377)
T ss_pred eEEEeehhhcc---CCCcccC----ccCCCceEEEEEccCCCe----EEEecC---ceEEecC--CCcccccCCC-----
Confidence 99999998332 1233332 579999999999986432 111111 1111111 1112333220
Q ss_pred eEecchhhHHhHHhhhhhhhhcCCCccchhHHHHHHHHHHHHHhhhhccCCCccchhccccEEEecCCChHHHHHHHHhc
Q 015082 242 VTLSKNLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNL 321 (413)
Q Consensus 242 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~al~~~~~~~~~did~~i~hq~~~~~~~~i~~~l 321 (413)
..|.+.++ ++ ...|++.. ...++....+ .+..++|+|++++||++.++....++.+
T Consensus 194 -----~yp~~dg~---------------~s--~~~Y~~~~-~~a~~~~~~k-~gls~~dfdy~vfH~P~~k~~~ka~k~l 249 (377)
T COG3425 194 -----PYPYVDGR---------------FS--EPAYFKHV-ENAAKGYMEK-TGLSPDDFDYIVFHQPNGKFPKKAAKSL 249 (377)
T ss_pred -----cccccCce---------------ec--HHHHHHHH-HHHHHHHHHH-hCCChhhhCeEEecCCCCchHHHHHHHh
Confidence 12222211 01 01233221 1122221221 2233789999999999999999999999
Q ss_pred CCCcccchhhHHHHhhhcCCCcchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhhhhhhhhccccCCc
Q 015082 322 QLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVWKALRSINSA 390 (413)
Q Consensus 322 gi~~e~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~l~~Gd~vll~~~G~G~~~~a~llr~~~~~~~~ 390 (413)
+...+++.++....++.||++++|+++.|..+|+..+ .+||+|++++||+|....+.-++..+.++-.
T Consensus 250 ~~~~e~v~~~l~~~~~vGN~YtgS~~L~Las~L~~a~-~~G~rIl~~SYGSGa~s~~fs~~v~~~~~~~ 317 (377)
T COG3425 250 GFKEEQVKPGLVYPQRIGNTYTGSLLLGLASLLDNAK-LPGDRILLFSYGSGAGSEAFSITVTDGIEER 317 (377)
T ss_pred CccHhhcCccchhhhhcCcccchhHHHHHHHHHhhcC-CCCCEEEEEeeCCCcceeEEEEEecccHHHH
Confidence 9999999988888889999999999999999999766 7999999999999987777766666655443
No 35
>TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade. Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes.
Probab=100.00 E-value=5.9e-33 Score=279.34 Aligned_cols=317 Identities=15% Similarity=0.178 Sum_probs=215.5
Q ss_pred eEEEEeeeeecCCCCccccHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCcee--ecCCcccCCCCCccHHHHHHHHHH
Q 015082 3 FGSISNFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDST--YLPEAVLNIPPNPSMKEARKEAEA 80 (413)
Q Consensus 3 ~v~I~~ig~~lP~~~~~v~~~el~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~--~~~~~~~~~~~~~~ma~~~~~~~~ 80 (413)
.|+|.+||.|+|+ ++|+|+|+.+..+. +.+ |+ .+||.+|+ ++.++| + ..+
T Consensus 1 ~vgI~~ig~y~P~--~~v~~~eLa~~~g~----~~~------k~--~~GI~~rr~av~~~~E----d----------~~t 52 (454)
T TIGR01833 1 DVGILALEIYFPS--QYVDQAELEKYDGV----SAG------KY--TIGLGQTKMGFCTDRE----D----------INS 52 (454)
T ss_pred CcEEEEEEEeCCC--eEEcHHHHHHhcCC----CHH------Hh--eechhheecccCCCCC----C----------HHH
Confidence 3799999999999 99999999987663 443 44 59999998 455553 2 467
Q ss_pred HHHHHHHHHHHhCCCCCCCcCeEEEEc-cCCCCCCChHHHHHHHc---CCCCCcceEEecCccchhHHHHHHHHHHHHHc
Q 015082 81 VMFGAIDELFAKTSVKPKDIGILIVNC-SLFNPTPSLSAMVINHY---KLRGNIISYNLGGMGCSAGLISIDLANNLLQV 156 (413)
Q Consensus 81 la~~Aa~~aL~~ag~~~~~Id~li~~s-~~~~~~p~~a~~v~~~l---Gl~~~~~~~~v~~~~C~~~~~al~~A~~~i~~ 156 (413)
|+++|++++|+++++++++||+||++| ++++..|+.+..|++.| |.+ ++.++|++ ++|+|++.||.+|.++|++
T Consensus 53 ma~~AA~~lL~~a~id~~~Id~Liv~TeS~~d~sps~a~~v~~lL~~lG~~-~~~~fDi~-~AC~G~t~AL~~A~~~i~s 130 (454)
T TIGR01833 53 LCLTVVSKLMERYNIDYNQIGRLEVGTETIIDKSKSVKTVLMQLFEESGNT-DVEGIDTT-NACYGGTAALFNAINWIES 130 (454)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCchHHHHHHHHHhcCCC-CceEEecc-ccchhHHHHHHHHHHHHHc
Confidence 779999999999999999999999997 57788999999999855 555 89999999 7999999999999999999
Q ss_pred CC--CCeEEEEEEccccCCCccCCCccchhhhcccccCceEEEEecCCCCcccccceEeeeeeeecCCCCcccccccccc
Q 015082 157 HP--NSYALVISMENITLNWYFGNDRSKLVSNCLFRMGGAAILLSNRFSDRRRSKYRLVHTVRTHKGADDNCFACVTQEE 234 (413)
Q Consensus 157 g~--~~~vLVv~~e~~s~~~~~~~d~~~~~~~~lfGDGAaA~ll~~~~~~~~~~~~~i~~~~~~~~~td~~~~~~~~~~~ 234 (413)
+. .++||||++|+ .. +.+... ..++||||+|+||++++.- .++. ++..++......+ +.|.
T Consensus 131 ~~~~~~~aLVV~sDi-a~----y~~~~~---~~t~GaGAvAmLv~~~~~~----~~~~-~~~~~~~~~~~DF----~rP~ 193 (454)
T TIGR01833 131 SSWDGRYALVVAGDI-AV----YAKGNA---RPTGGAGAVAMLIGPNAPI----VFER-GLRGSHMQHAYDF----YKPD 193 (454)
T ss_pred CCcCCCeEEEEEecc-cc----ccCCCe---eeccccceEEEEeccCccc----eecC-ccceEEEeecccc----cCCC
Confidence 85 59999999998 22 122221 2578999999999977641 1111 0111222211222 2222
Q ss_pred CCCCceeeEecchhhHHhHHhhhhhhhhcCCCccchhHHHHHHHHHHHHHhhhhccCCC---ccchhccccEEEecCCCh
Q 015082 235 DSEGKVGVTLSKNLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPY---IPDFKLAFEHFCIHAGGR 311 (413)
Q Consensus 235 ~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~al~~~---~~~~~~did~~i~hq~~~ 311 (413)
. +.+.|.+.|+. -... +...+...+..|. +....+++.+ .+...+|+|++++|++..
T Consensus 194 ~---------~~~~p~vdg~~-S~~~-----Yl~a~~~~y~~y~-----~~~~~a~~~~~~~~~~~~~dfd~~~fH~P~~ 253 (454)
T TIGR01833 194 L---------ASEYPVVDGKL-SIQC-----YLSALDRCYKSYC-----KKIEKQWGKSGGDRKFTLNDFDYMVFHSPYC 253 (454)
T ss_pred C---------CCcccccCCcc-CHHH-----HHHHHHHHHHHHH-----HHHHHhhhhhccccCCCHhHcCEEeccCCcc
Confidence 1 01122222210 0000 0000111111121 1111122211 123468999999999987
Q ss_pred HHHHHH-HHhc----C-----------------------------------------CCcccchhhHHHHhhhcCCCcch
Q 015082 312 AVLDEL-EKNL----Q-----------------------------------------LSDWHMEPSRMTLYRFGNTSSSS 345 (413)
Q Consensus 312 ~~~~~i-~~~l----g-----------------------------------------i~~e~~~~s~~~l~~~Gn~~sas 345 (413)
++...- +..+ . ...+|+.++...-+++||+.++|
T Consensus 254 km~~ka~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kv~ps~~~~~~vGN~YtaS 333 (454)
T TIGR01833 254 KLVQKSLARLLYNDFLRNPSSIDTALYEGLEALSTLKLEDTYFDRDLEKAFMKASKELFDKKTKPSLLVPNQVGNMYTAS 333 (454)
T ss_pred cHHHHHHHHHHHhhhhhccccccchhhcccchhhccccccccchhhHHHHHHhhhhhhHHHhhcchhHHHHhcCchhhhH
Confidence 777654 2222 1 11255655666777999999999
Q ss_pred HHHHHHHHHHcCC--CCCCCeEEEEeeccchhhhhhhhhhccc
Q 015082 346 LWYELAYSEAKGR--IKKGDRTWQIAFGSGFKCNSAVWKALRS 386 (413)
Q Consensus 346 i~i~L~~~~~~g~--l~~Gd~vll~~~G~G~~~~a~llr~~~~ 386 (413)
+++.|..+++..+ ...|++|+|++||+|.......+++.+.
T Consensus 334 lyl~L~Sll~~~~~~~~~g~ri~~fSYGSG~~se~fs~~v~~~ 376 (454)
T TIGR01833 334 LYGCLASLLSSKSAQELAGKRVGMFSYGSGLAASMFSLRVSQD 376 (454)
T ss_pred HHHHHHHHHhhCCccccCCCEEEEEeccCCcceeeEEEEEeCC
Confidence 9999999997543 4579999999999999888877777754
No 36
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=100.00 E-value=4e-33 Score=254.96 Aligned_cols=198 Identities=22% Similarity=0.276 Sum_probs=160.2
Q ss_pred eEEEEeeeeecCCCCccccHHHHHHHHHhcCCCCh--hhHHHHHHHHHHcCCCceeecCCcccC---------CCC--Cc
Q 015082 3 FGSISNFSCYKPEESRKCTKRIFMDQSRMTGTFTE--ENLQFQKKILERSGLGDSTYLPEAVLN---------IPP--NP 69 (413)
Q Consensus 3 ~v~I~~ig~~lP~~~~~v~~~el~~~~~~~~~~~~--~~~~~~~~i~~~~GI~~R~~~~~~~~~---------~~~--~~ 69 (413)
+.+|.+||+.+|+ ++++|+|+.+.+-.....+. +..+++++|++++||++||..-+.++. ..+ ..
T Consensus 14 ~A~Il~IgTA~P~--~~~~Q~~~~e~~~~~~~~~~~~~~~~~l~ri~~~sgI~~R~~vl~~~~~~~~p~~~~~~~ps~~~ 91 (226)
T PF00195_consen 14 PAYILSIGTAVPP--HRITQEEIAEFFFRITHSDDLPDLRRKLRRIFENSGIEKRHSVLPEEWLDEYPSFWDFADPSLAE 91 (226)
T ss_dssp SEEEEEEEEE-SS--EEEEGCCHHHHHHHHTT-TTGHHHHHHHHHHHHHST-SEEEESS-HHHHHTSGGGHSSSSS-HHH
T ss_pred CeEEEEEEEeCCC--ceecHHHHHHHHHHHhcccchhHHHHHHHhhhhccccceeccccchhhhhcCcchhhccCccHHH
Confidence 4799999999999 99999999987543222232 334688999999999999987543221 011 12
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcCeEEEEccCCCCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHH
Q 015082 70 SMKEARKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDL 149 (413)
Q Consensus 70 ~ma~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~ 149 (413)
+|..|.+.+.+|+.+|+++||+++|++++|||+||++|+++...|+++.+|.++|||++++..+.++++||++++.+|..
T Consensus 92 R~~~~~~~a~~L~~~Aa~~AL~~~g~~~~dIthlv~vs~TG~~~PglD~~l~~~LgL~~~v~R~~i~~~GC~gg~~~L~~ 171 (226)
T PF00195_consen 92 RNALYAEEAPPLAEEAARKALAEAGLDPSDITHLVTVSCTGIAAPGLDARLINRLGLRPDVQRTPIFGMGCAGGAAGLRR 171 (226)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTS-GGGECEEEEEESSSSECS-HHHHHHHHHT--TTSEEEEEES-GGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCcccceEEEEecCCcCCCchhHHHHhcCCCCCCcEEEEEeccchhhHHHHHHH
Confidence 57789999999999999999999999999999999998888889999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCeEEEEEEccccCCCccCC--CccchhhhcccccCceEEEEecCC
Q 015082 150 ANNLLQVHPNSYALVISMENITLNWYFGN--DRSKLVSNCLFRMGGAAILLSNRF 202 (413)
Q Consensus 150 A~~~i~~g~~~~vLVv~~e~~s~~~~~~~--d~~~~~~~~lfGDGAaA~ll~~~~ 202 (413)
|..+.++++..+||||++|.+|.+|+.+. +..++++.+||||||+|+||+.+|
T Consensus 172 A~~~~~~~p~a~VLvv~vElcsl~~~~~~~~~~~~lv~~aLFgDGaAA~vv~~dP 226 (226)
T PF00195_consen 172 AKDIARANPGARVLVVCVELCSLHFQAPNDDSLDNLVANALFGDGAAAVVVGADP 226 (226)
T ss_dssp HHHHHHHSTT-EEEEEEEEEGGGTHHHCCTTSHHHHHHHHHB-EEEEEEEEESS-
T ss_pred HHHHHhCCccceEEEEEEEeeEEEEecCCcccHHHHhHHhhhcCCceEEEEccCC
Confidence 99999999999999999999998776543 467888999999999999999765
No 37
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=99.95 E-value=3.4e-28 Score=230.05 Aligned_cols=235 Identities=17% Similarity=0.152 Sum_probs=179.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCeEEEEcc-CCCCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHHc
Q 015082 78 AEAVMFGAIDELFAKTSVKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQV 156 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~-~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~~ 156 (413)
..+|+.+|++++|+++|++++|||.||++++ +++..|+.+.+++..+|++ +.++++++ .+|++++.||++|.++|++
T Consensus 7 ~~~l~~~A~~~al~~ag~~~~~i~~li~~~~~~~~~~~~~a~~i~~~lg~~-~~~~~~i~-~~C~s~~~al~~A~~~i~~ 84 (254)
T cd00327 7 ASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGIS-GGPAYSVN-QACATGLTALALAVQQVQN 84 (254)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCceEEEEEECCCCccccHHHHHHHHHhCCC-CCCcceec-cHhHHHHHHHHHHHHHHHC
Confidence 5789999999999999999999999999975 6666799999999999997 68999999 7999999999999999999
Q ss_pred CCCCeEEEEEEccccCCCccCCCccchhhhcccccCceEEEEecCCCCcc---cccceEeeeeeeecCCCCccccccccc
Q 015082 157 HPNSYALVISMENITLNWYFGNDRSKLVSNCLFRMGGAAILLSNRFSDRR---RSKYRLVHTVRTHKGADDNCFACVTQE 233 (413)
Q Consensus 157 g~~~~vLVv~~e~~s~~~~~~~d~~~~~~~~lfGDGAaA~ll~~~~~~~~---~~~~~i~~~~~~~~~td~~~~~~~~~~ 233 (413)
|..+++||+++|. .+|||||+|+||++.+.... +...++.+. ....++..+.
T Consensus 85 g~~~~~lv~~~e~-----------------~~~gdGAaa~vL~~~~~a~~~~~~~~~~i~~~---~~~~~~~~~~----- 139 (254)
T cd00327 85 GKADIVLAGGSEE-----------------FVFGDGAAAAVVESEEHALRRGAHPQAEIVST---AATFDGASMV----- 139 (254)
T ss_pred CCCCEEEEEecce-----------------eeecceEEEEEECcHHHHHHCCCceEEEEEEE---EEcCCCCCCC-----
Confidence 9999999999997 37999999999998653210 011222221 1111211100
Q ss_pred cCCCCceeeEecchhhHHhHHhhhhhhhhcCCCccchhHHHHHHHHHHHHHhhhhccCCCccchhccccEEEecCCChHH
Q 015082 234 EDSEGKVGVTLSKNLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDFKLAFEHFCIHAGGRAV 313 (413)
Q Consensus 234 ~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~al~~~~~~~~~did~~i~hq~~~~~ 313 (413)
+.. . .. . +....++++++ .+..++|||+|++|+.+..+
T Consensus 140 --------~~~---~----~~------------------~----~~~~i~~~l~~-----ag~~~~did~~~~h~~~~~~ 177 (254)
T cd00327 140 --------PAV---S----GE------------------G----LARAARKALEG-----AGLTPSDIDYVEAHGTGTPI 177 (254)
T ss_pred --------CCC---C----hH------------------H----HHHHHHHHHHH-----cCCCHHHCCEEEccCCcCcc
Confidence 000 0 00 0 00011223332 22346899999999999999
Q ss_pred HHHHHHhcCCCcccch--hhHHHHhhhcCCCcchHHHHHHHHHHcCCCC-------CCCeEEEEeeccchhhhhhhh
Q 015082 314 LDELEKNLQLSDWHME--PSRMTLYRFGNTSSSSLWYELAYSEAKGRIK-------KGDRTWQIAFGSGFKCNSAVW 381 (413)
Q Consensus 314 ~~~i~~~lgi~~e~~~--~s~~~l~~~Gn~~sasi~i~L~~~~~~g~l~-------~Gd~vll~~~G~G~~~~a~ll 381 (413)
++.+++.++++.++.. ++..+..++||+++|+.++.|.++++..+.+ +|++++++++|.|+++++++|
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~as~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~g~Gg~~~~~~l 254 (254)
T cd00327 178 GDAVELALGLDPDGVRSPAVSATLIMTGHPLGAAGLAILDELLLMLEHEFIPPTPREPRTVLLLGFGLGGTNAAVVL 254 (254)
T ss_pred ccHHHHHHHHHHhCCCCCceeccccccccchHHHHHHHHHHHHHHHhCCCcCCCCCCcCEEEEeeEcCCCcceEEEC
Confidence 9999999998877662 2256788999999999999999998765554 899999999999999998775
No 38
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=99.93 E-value=5.4e-26 Score=223.44 Aligned_cols=252 Identities=15% Similarity=0.119 Sum_probs=177.7
Q ss_pred HHHHHHHHHHHHHHhCCCC----CCCcCeEEEEcc-CCCC---------------------CCChHHHHHHHcCCCCCcc
Q 015082 78 AEAVMFGAIDELFAKTSVK----PKDIGILIVNCS-LFNP---------------------TPSLSAMVINHYKLRGNII 131 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~----~~~Id~li~~s~-~~~~---------------------~p~~a~~v~~~lGl~~~~~ 131 (413)
..+|+.+|+++||+++|++ +++||.||++++ ..+. .|+.+..++..+|++ .+
T Consensus 11 ~~~l~~~aa~~aL~~Ag~~~~~~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--g~ 88 (332)
T cd00825 11 VSILGFEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYVVTKAMFPGASGQIATPLGIH--GP 88 (332)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEEeCCccHHHHhhhhccccccCcchhhcccchHHHHHHHHHhCCC--CC
Confidence 4678899999999999999 999999999864 3332 677899999999994 78
Q ss_pred eEEecCccchhHHHHHHHHHHHHHcCCCCeEEEEEEccccCCCcc----------CCC----ccchhhhcccccCceEEE
Q 015082 132 SYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENITLNWYF----------GND----RSKLVSNCLFRMGGAAIL 197 (413)
Q Consensus 132 ~~~v~~~~C~~~~~al~~A~~~i~~g~~~~vLVv~~e~~s~~~~~----------~~d----~~~~~~~~lfGDGAaA~l 197 (413)
+++++ .+|++++.||+.|.++|++|..+++||+++|..+..+.. ++. ........+|||||+|+|
T Consensus 89 ~~~v~-~~cas~~~al~~A~~~i~~g~~~~~Lv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gdGaaA~v 167 (332)
T cd00825 89 AYDVS-AACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMDCEFDAMGALSTPEKASRTFDAAADGFVFGDGAGALV 167 (332)
T ss_pred ccccc-cHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHhhccccCCCCCCCCCCCCCCCEEEEeeEEEEE
Confidence 99999 799999999999999999999999999999987652211 000 011113579999999999
Q ss_pred EecCCCCcc---cccceEeeeeeeecCCCCccccccccccCCCCceeeEecchhhHHhHHhhhhhhhhcCCCccchhHHH
Q 015082 198 LSNRFSDRR---RSKYRLVHTVRTHKGADDNCFACVTQEEDSEGKVGVTLSKNLMAVAGDALKTNITTLGPLVLPMSEQL 274 (413)
Q Consensus 198 l~~~~~~~~---~~~~~i~~~~~~~~~td~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (413)
|++.+.... +...++.+ ....+++...... .+. .. .
T Consensus 168 L~~~~~a~~~~~~~~~~i~~---~~~~~~~~~~~~~-----------------~~~--~~------------------~- 206 (332)
T cd00825 168 VEELEHALARGAHIYAEIVG---TAATIDGAGMGAF-----------------APS--AE------------------G- 206 (332)
T ss_pred ECcHHHHHHCCCeEEEEEEE---EEEccCCCCCCCC-----------------CcC--HH------------------H-
Confidence 997654210 01112222 1122222211000 000 00 0
Q ss_pred HHHHHHHHHHhhhhccCCCccchhccccEEEecCCChHHHHHHHHhcCCCcccc--hhhHHHHhhhcCCCcchHHHHHHH
Q 015082 275 LFFATLVGKKLFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLQLSDWHM--EPSRMTLYRFGNTSSSSLWYELAY 352 (413)
Q Consensus 275 ~~~~~~~~~~v~~~al~~~~~~~~~did~~i~hq~~~~~~~~i~~~lgi~~e~~--~~s~~~l~~~Gn~~sasi~i~L~~ 352 (413)
... ..+++++. .+..++|||++++|+.+..+.+.+++.++++..+. .....+..+|||+++|+.++.|..
T Consensus 207 --~~~-~i~~al~~-----agl~~~did~~~~h~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~G~~~aas~~~~l~~ 278 (332)
T cd00825 207 --LAR-AAKEALAV-----AGLTVWDIDYLVAHGTGTPIGDVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAVVLAVDE 278 (332)
T ss_pred --HHH-HHHHHHHH-----cCCCHhHCCEEEccCCCCCCCCHHHHHHHHHHhCCCCceeECCCcccccchhHhHHHHHHH
Confidence 000 11223322 23347899999999999999999988877765531 012568889999999999999999
Q ss_pred HHHcCCCC-------------------------CCCeEEEEeeccchhhhhhhh
Q 015082 353 SEAKGRIK-------------------------KGDRTWQIAFGSGFKCNSAVW 381 (413)
Q Consensus 353 ~~~~g~l~-------------------------~Gd~vll~~~G~G~~~~a~ll 381 (413)
++...+.+ +|++++++++|.|.++++++|
T Consensus 279 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~G~Gg~~~~~vl 332 (332)
T cd00825 279 AVLMLEHGFIPPSIHIEELDEAGLNIVTETTPRELRTALLNGFGLGGTNATLVL 332 (332)
T ss_pred HHHHHhcCccCCCCCCCCCCcccCcccCCCCCCCCCEEEEeeecCCCeeEEEeC
Confidence 88754444 789999999999999998875
No 39
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....
Probab=99.83 E-value=5.2e-21 Score=152.29 Aligned_cols=84 Identities=33% Similarity=0.509 Sum_probs=75.1
Q ss_pred hhccccEEEecCCChHHHHHHHHhcCCCcccchhhHHHHhhhcCCCcchHHHHHHHHHHcCCCCCCCeEEEEeeccchhh
Q 015082 297 FKLAFEHFCIHAGGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKC 376 (413)
Q Consensus 297 ~~~did~~i~hq~~~~~~~~i~~~lgi~~e~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~l~~Gd~vll~~~G~G~~~ 376 (413)
..+|||+|++||.|.++++.+++.+|++++++ +.++++|||+++|++|++|++++++|++++||+|+++++|+|++|
T Consensus 7 ~~~did~~i~hq~~~~~~~~~~~~lgi~~~~~---~~~~~~~Gn~~sa~~~~~L~~~~~~g~~~~Gd~vl~~~~G~G~~~ 83 (90)
T PF08541_consen 7 SPDDIDHFIPHQASKKILDSIAKRLGIPPERF---PDNLAEYGNTGSASIPINLADALEEGRIKPGDRVLLVGFGAGFSW 83 (90)
T ss_dssp -GGGESEEEE-SSSHHHHHHHHHHHTS-GGGB---E-THHHH-B-GGGHHHHHHHHHHHTTSSCTTEEEEEEEEETTTEE
T ss_pred CHHHCCEEEeCCCCHHHHHHHHHHcCCcHHHH---HHHHhccCcchhhhHHHHHHHHHHcCCCCCCCEEEEEEEEhhhee
Confidence 36899999999999999999999999999998 578899999999999999999999999999999999999999999
Q ss_pred hhhhhhh
Q 015082 377 NSAVWKA 383 (413)
Q Consensus 377 ~a~llr~ 383 (413)
+++++||
T Consensus 84 ~~~~~~~ 90 (90)
T PF08541_consen 84 GAAVLRW 90 (90)
T ss_dssp EEEEEE-
T ss_pred EEEEEEC
Confidence 9999997
No 40
>PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the N-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1X9E_B 2HDB_B 2WYA_C 2P8U_A 3V4X_A 3V4N_C 3LEH_A 1TXT_D 1TVZ_A 2FA0_A ....
Probab=99.81 E-value=8e-20 Score=159.53 Aligned_cols=165 Identities=19% Similarity=0.230 Sum_probs=125.1
Q ss_pred eEEEEeeeeecCCCCccccHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCceeecCCcccCCCCCccHHHHHHHHHHHH
Q 015082 3 FGSISNFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDSTYLPEAVLNIPPNPSMKEARKEAEAVM 82 (413)
Q Consensus 3 ~v~I~~ig~~lP~~~~~v~~~el~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~ma~~~~~~~~la 82 (413)
.|+|.+|+.|+|. ++++.+|+.+..+. ++. ++....|.+++.|+.+.| ++..||
T Consensus 4 ~VGI~~i~~y~p~--~~v~~~~La~~~g~----d~~------K~~~glgq~~~av~~~~E--------------D~vTmA 57 (174)
T PF01154_consen 4 NVGIDAIEFYIPR--YYVDQEELAEARGV----DPG------KYTIGLGQEKMAVPPPDE--------------DIVTMA 57 (174)
T ss_dssp SEEEEEEEEE-ES--EEEEHHHHHHHTTS-----TC------HHHTTT--SEEEE--TTS---------------HHHHH
T ss_pred cccEeEEEEecCc--eEecHHHHHHHhCC----CHH------HhhhhcCeeEEEeCCCcc--------------cHHHHH
Confidence 4899999999999 99999999987764 444 555667878888887764 356677
Q ss_pred HHHHHHHHHhCCCCCCCcCeEEEEc-cCCCCCCChHHHHHHHcCC--CCCcceEEecCccchhHHHHHHHHHHHHHcCC-
Q 015082 83 FGAIDELFAKTSVKPKDIGILIVNC-SLFNPTPSLSAMVINHYKL--RGNIISYNLGGMGCSAGLISIDLANNLLQVHP- 158 (413)
Q Consensus 83 ~~Aa~~aL~~ag~~~~~Id~li~~s-~~~~~~p~~a~~v~~~lGl--~~~~~~~~v~~~~C~~~~~al~~A~~~i~~g~- 158 (413)
+.|++++|++.++++++|+.|+++| +.-....+.+.+|++.||+ ..++..+++. ++|.|+..||+.|..++++++
T Consensus 58 ~nAa~~ll~~~~id~~~Ig~l~vgTES~vD~sKs~~t~v~~ll~~s~~~~~~~~e~k-~ACygGTaAL~~a~~~v~s~~~ 136 (174)
T PF01154_consen 58 ANAAKPLLDRYNIDPDDIGRLIVGTESGVDKSKSISTYVHQLLGLSGNPDCRGVEMK-QACYGGTAALQNAVNWVASSPW 136 (174)
T ss_dssp HHHHHTTHHHHT-HHHHEEEEEEE-SS-SBSSS-HHHHHHHHTTTTT-SSSEEEEEE-SGGGHHHHHHHHHHHHHCSTTS
T ss_pred HHHHHHHHHHcCCCHHHccEEEEeccccccccccHHHHHHHHhCcCCCCceeeeehh-hhhHHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999998 4333467799999999999 4467889999 799999999999999999984
Q ss_pred -CCeEEEEEEccccCCCccCCCccchhhhcccccCceEEEEecCC
Q 015082 159 -NSYALVISMENITLNWYFGNDRSKLVSNCLFRMGGAAILLSNRF 202 (413)
Q Consensus 159 -~~~vLVv~~e~~s~~~~~~~d~~~~~~~~lfGDGAaA~ll~~~~ 202 (413)
.+++|||++|.. . |-. .+. ..+-|-||+|+||++..
T Consensus 137 ~g~~aLVVasDiA-~-y~~-g~~-----e~TqGAGAVAmLi~~na 173 (174)
T PF01154_consen 137 DGRKALVVASDIA-R-YDL-GSA-----EPTQGAGAVAMLIGPNA 173 (174)
T ss_dssp TTEEEEEEEEEEE----ST-TTT-----GGG-EEEEEEEEEECS-
T ss_pred CCCeEEEEecccc-c-cCC-CCc-----cccccceeEEEEecCCC
Confidence 689999999983 3 222 221 25789999999999753
No 41
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=99.79 E-value=1.2e-18 Score=172.35 Aligned_cols=314 Identities=12% Similarity=0.036 Sum_probs=195.4
Q ss_pred CceEEEEeeeeecCCCCccccHHHHHHHHHhc-CCCChhh-HHH--HHHHHHHcCCCceeecCCcccCCCCCccHHHHHH
Q 015082 1 MIFGSISNFSCYKPEESRKCTKRIFMDQSRMT-GTFTEEN-LQF--QKKILERSGLGDSTYLPEAVLNIPPNPSMKEARK 76 (413)
Q Consensus 1 ~~~v~I~~ig~~lP~~~~~v~~~el~~~~~~~-~~~~~~~-~~~--~~~i~~~~GI~~R~~~~~~~~~~~~~~~ma~~~~ 76 (413)
|-.++|.++|...|=+ .+.++....+..- .++.... ... -++|..++|+.+|++.. . +
T Consensus 2 ~~~v~I~~~g~vs~lG---~~~~~~~aa~ragi~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~--------------~ 63 (348)
T PRK06147 2 MRALAIVGSGMVTAVG---LDAPSSCAAIRARLDNFQETRFIDPPGGEWLIGAPVPLPPPWRG-P--------------E 63 (348)
T ss_pred CCceEEEecceeecCc---CCHHHHHHHHHcccccccccccccCCCCCceEeecCcCCcccCc-h--------------H
Confidence 5679999999999984 4444444444210 0111000 000 02555566776666532 1 2
Q ss_pred HHHHHHHHHHHHHHHhCC-CCCCCcCeEEEEcc------CCCCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHH
Q 015082 77 EAEAVMFGAIDELFAKTS-VKPKDIGILIVNCS------LFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDL 149 (413)
Q Consensus 77 ~~~~la~~Aa~~aL~~ag-~~~~~Id~li~~s~------~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~ 149 (413)
...+|+.+|++++|++++ +++++||.+|+.++ ++...+..+..++.++|+....+++++. .+|++++.||..
T Consensus 64 r~~~La~~Al~~aL~~a~~~~~~~i~lil~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~~~~~~~i~-~~casg~~Al~~ 142 (348)
T PRK06147 64 RLAEMAAPAIAEALEGLPALDASEAPLLLCVAEEERPGRPPDLEERLLRELEARLGLRLEPGSAVIA-RGRVSGAVALAQ 142 (348)
T ss_pred HHHHHHHHHHHHHHHhcccccccCCcEEEEeCchhcCCCCcchHHHHHHHHHHHhCCCCCCCccccc-ccchHHHHHHHH
Confidence 246889999999999999 79999999887633 2233445678999999996456789999 799999999999
Q ss_pred HHHHHHcCCCCeEEEEEEccccCCC-cc---------CCCccchhhhcccccCceEEEEecCCCCcccccceEeeeeeee
Q 015082 150 ANNLLQVHPNSYALVISMENITLNW-YF---------GNDRSKLVSNCLFRMGGAAILLSNRFSDRRRSKYRLVHTVRTH 219 (413)
Q Consensus 150 A~~~i~~g~~~~vLVv~~e~~s~~~-~~---------~~d~~~~~~~~lfGDGAaA~ll~~~~~~~~~~~~~i~~~~~~~ 219 (413)
|.++|++|.++.+||+++|.++... .. ..++. ..++|||||+++||++.+.... .+..+.. ..
T Consensus 143 A~~~i~~G~~~~~lvgg~d~~~~~~~~~~~~~~~~l~~~~~~---~G~v~GEGA~a~vLe~~~~A~~-rga~i~a-~g-- 215 (348)
T PRK06147 143 ARRLIAAGGCPRVLVAGVDSLLTGPTLAHYEARDRLLTSQNS---NGFIPGEAAAAVLLGRPAGGEA-PGLPLLG-LG-- 215 (348)
T ss_pred HHHHHHcCCCCEEEEEeeccccCHHHHHHHHHhhccCCCCCC---CceeeeceEEEEEEccHhhhhc-CCCceEE-EE--
Confidence 9999999999999999999866510 00 01222 2579999999999997654211 1122222 11
Q ss_pred cCCCCccccccccccCCCCceeeEecchhhHHhHHhhhhhhhhcCCCccchhHHHHHHHHHHHHHhhhhccCCCccchhc
Q 015082 220 KGADDNCFACVTQEEDSEGKVGVTLSKNLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDFKL 299 (413)
Q Consensus 220 ~~td~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~al~~~~~~~~~ 299 (413)
...+...+. . +...|. .+. .. .+.++.++++ .+..++
T Consensus 216 ~~~~~~~~~---~------------~~~~p~-~g~------------------gl--------~~ai~~AL~~-agl~~~ 252 (348)
T PRK06147 216 LGREPAPVG---E------------SEDLPL-RGD------------------GL--------TQAIRAALAE-AGCGLE 252 (348)
T ss_pred EeecCCCcc---c------------CCCCCC-ChH------------------HH--------HHHHHHHHHH-cCCCHH
Confidence 111111100 0 000000 000 00 1223333332 233478
Q ss_pred cccEEEecCCChHHHH-----HHHHhcCCCcccchhhHHHHhhhcCCCcchHHHHHHHHH---HcCCCCCCCeEEEEeec
Q 015082 300 AFEHFCIHAGGRAVLD-----ELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSE---AKGRIKKGDRTWQIAFG 371 (413)
Q Consensus 300 did~~i~hq~~~~~~~-----~i~~~lgi~~e~~~~s~~~l~~~Gn~~sasi~i~L~~~~---~~g~l~~Gd~vll~~~G 371 (413)
|||++..|..+....+ .+.+.++-..+... .+.+-..+||+++|+-.+.+.-.+ ++| .-+|+++|+++..
T Consensus 253 dId~v~ah~~gt~~~d~~e~~A~~~~f~~~~~~~~-~~~~k~~~Gh~~aAaG~~~~~~a~~~~~~g-~~~g~~~L~~s~~ 330 (348)
T PRK06147 253 DMDYRIADLNGEQYRFKEAALAEMRLFRVRKEFFD-LWHPAECIGEIGAAIGPALLGVALAASRKG-YGPGPNVLCHLSD 330 (348)
T ss_pred HCCEEEcCCCCCccchHHHHHHHHHHhhhccCCCc-eecchHhhcchHHHHHHHHHHHHHHHHHcC-cCCCCcEEEEecC
Confidence 9999999987655432 23344553222221 145677899999999888887544 444 4579999999998
Q ss_pred cchhhhhhhhhhcc
Q 015082 372 SGFKCNSAVWKALR 385 (413)
Q Consensus 372 ~G~~~~a~llr~~~ 385 (413)
..-.-++++++..+
T Consensus 331 d~g~r~a~~l~~~~ 344 (348)
T PRK06147 331 DDGARAALVLEYRR 344 (348)
T ss_pred CCCceEEEEEeccc
Confidence 76667899988665
No 42
>TIGR02845 spore_V_AD stage V sporulation protein AD. Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.
Probab=99.77 E-value=1.8e-17 Score=158.04 Aligned_cols=116 Identities=15% Similarity=0.137 Sum_probs=98.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCeEEEEccCCCCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHHcC
Q 015082 78 AEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVH 157 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~~g 157 (413)
..+|+.+|+++||+++|++++|||.+|+++.+++ +..+..+++.||+ +.++++ .+|++++.||.+|..+|++|
T Consensus 50 e~eLa~eAa~~ALekAGL~~~DID~IIvGdl~~Q--~~~As~vA~~LGI----P~fdV~-~ACSTf~~AL~lAa~lI~SG 122 (327)
T TIGR02845 50 ERKLMEDAVNLALKKANLKKDDVDFFLAGDLLNQ--IITANFVARDLGI----PFLGLY-GACSTSMETLALGAMLVDGG 122 (327)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEeCCCCc--ccHHHHHHHHhCC----CEEEEe-ccCHHHHHHHHHHHHHHhCC
Confidence 4688999999999999999999999999876543 4568899999997 449999 69999999999999999999
Q ss_pred CCCeEEEEEEccccC---C--Cc-cC--CCccchhhhcccccCceEEEEecCCC
Q 015082 158 PNSYALVISMENITL---N--WY-FG--NDRSKLVSNCLFRMGGAAILLSNRFS 203 (413)
Q Consensus 158 ~~~~vLVv~~e~~s~---~--~~-~~--~d~~~~~~~~lfGDGAaA~ll~~~~~ 203 (413)
.+++|||+++|+.|. . +. +| +++.+ ..+|||||+|+||++.+.
T Consensus 123 ~ad~VLVV~Ssh~S~AErqfr~p~eyg~q~~~t---a~~tgdGAGA~vl~~~~~ 173 (327)
T TIGR02845 123 FADRVLAATSSHYATAERQFRYPTEYGVQKPPT---AQWTVTGAGAVLLASTGG 173 (327)
T ss_pred CCCEEEEEEecccchhhhhcccccccccCCCCe---eeEEEcccEEEEEeecCC
Confidence 999999999988772 1 22 34 45554 479999999999998764
No 43
>KOG1393 consensus Hydroxymethylglutaryl-CoA synthase [Lipid transport and metabolism]
Probab=99.73 E-value=5.5e-17 Score=154.27 Aligned_cols=322 Identities=16% Similarity=0.208 Sum_probs=200.0
Q ss_pred eEEEEeeeeecCCCCccccHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCceeecCCcccCCCCCccHHHHHHHHHHHH
Q 015082 3 FGSISNFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDSTYLPEAVLNIPPNPSMKEARKEAEAVM 82 (413)
Q Consensus 3 ~v~I~~ig~~lP~~~~~v~~~el~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~ma~~~~~~~~la 82 (413)
.|+|.++..|+|. +.|+++|+..+-+. +.. +..=.+|..+--|+.+. |+...|+
T Consensus 11 dvGI~aieiyfP~--~yV~Q~elEk~d~v----s~g------KytIGLGq~~Mgfcsdr--------------EDi~Sl~ 64 (462)
T KOG1393|consen 11 DVGIIAIEIYFPS--QYVDQEELEKFDGV----SAG------KYTIGLGQTQMGFCSDR--------------EDIISLS 64 (462)
T ss_pred ccceeEEEEEcCc--cccChhhHhhcCCc----ccc------ceEeccCcceecccCch--------------hhhhhhh
Confidence 3799999999999 99999999876543 221 11112333333455543 3355677
Q ss_pred HHHHHHHHHhCCCCCCCcCeEEEEccC-CCCCCChHHHHHHHcC--CCCCcceEEecCccchhHHHHHHHHHHHHHcCC-
Q 015082 83 FGAIDELFAKTSVKPKDIGILIVNCSL-FNPTPSLSAMVINHYK--LRGNIISYNLGGMGCSAGLISIDLANNLLQVHP- 158 (413)
Q Consensus 83 ~~Aa~~aL~~ag~~~~~Id~li~~s~~-~~~~p~~a~~v~~~lG--l~~~~~~~~v~~~~C~~~~~al~~A~~~i~~g~- 158 (413)
..++++++++..++++.|+.|-++|.+ -.-..+.-..+.+.++ -+-++.-+|.. ++|.||.+||-.|.+||++..
T Consensus 65 ltvvs~Lmery~i~~~~IGRLEVGTETiiDKSKSVKt~LMqLF~~sgNtdIEGiDtt-nACYGGtaALfnavnWiESssW 143 (462)
T KOG1393|consen 65 LTVVSRLMERYNIDPDSIGRLEVGTETIIDKSKSVKTVLMQLFEESGNTDIEGIDTT-NACYGGTAALFNAVNWIESSSW 143 (462)
T ss_pred HHHHHHHHHHhCCChhhcceEEecceeccccchHHHHHHHHHhhhcCCCcccccccc-ccccccHHHHHHHhhhhhhccc
Confidence 999999999999999999999999742 1124455566666655 23368889999 799999999999999999874
Q ss_pred -CCeEEEEEEccccCCCccCCCccchhhhcccccCceEEEEecCCCCcccccceEeeeeeeecCCCCccccccccccCCC
Q 015082 159 -NSYALVISMENITLNWYFGNDRSKLVSNCLFRMGGAAILLSNRFSDRRRSKYRLVHTVRTHKGADDNCFACVTQEEDSE 237 (413)
Q Consensus 159 -~~~vLVv~~e~~s~~~~~~~d~~~~~~~~lfGDGAaA~ll~~~~~~~~~~~~~i~~~~~~~~~td~~~~~~~~~~~~~~ 237 (413)
.+.+|||++|..- |....-| .+-|-||+|++|++...-. |+ .++..+++.. .|+ +|-|.
T Consensus 144 DGr~aivV~gDIAv--Y~~G~aR------pTGGAgAVAmLIgPnApi~----fe-rglr~thM~h---ayD-FyKPd--- 203 (462)
T KOG1393|consen 144 DGRYAIVVCGDIAV--YAKGNAR------PTGGAGAVAMLIGPNAPII----FE-RGLRATHMQH---AYD-FYKPD--- 203 (462)
T ss_pred CCceeEEEEeeEEE--ecCCCCC------CCCCcceEEEEEcCCCceE----ec-ccchhhhhhh---hhh-ccCCC---
Confidence 7999999999732 2222333 3568999999999876521 22 1121222221 122 23332
Q ss_pred CceeeEecchhhHHhHHhhhhhhhhcCCCccchhHHHHHHHHHHHHHhhhhccCCCccchhccccEEEecCCChHHHHH-
Q 015082 238 GKVGVTLSKNLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDE- 316 (413)
Q Consensus 238 g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~al~~~~~~~~~did~~i~hq~~~~~~~~- 316 (413)
+..+.|-+.|+. .++. +...+...+..| .+++-++-.+. -....+++|++++|.+--++.+.
T Consensus 204 ------l~SEyPvVDGkl---Si~c---Yl~Ald~cY~~~----~kK~~~~~~~~-~~~~l~~fdy~ifHsP~cKlvqKs 266 (462)
T KOG1393|consen 204 ------LLSEYPVVDGKL---SIQC---YLSALDRCYTVY----RKKIAAQWQKS-GSDNLNSFDYIIFHSPYCKLVQKS 266 (462)
T ss_pred ------CCCcCceecCee---hHHH---HHHHHHHHHHHH----HHHHHHHhccc-cCcccccCCeEEEeCchhhhHHHH
Confidence 223455554421 1110 000010011111 11111111110 11124689999999987666554
Q ss_pred HHH-----------------------------------------hcCCCcccchhhHHHHhhhcCCCcchHHHHHHHHHH
Q 015082 317 LEK-----------------------------------------NLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEA 355 (413)
Q Consensus 317 i~~-----------------------------------------~lgi~~e~~~~s~~~l~~~Gn~~sasi~i~L~~~~~ 355 (413)
+++ ...+-.+|..+|.-.-++.||+.++|++..|..++.
T Consensus 267 ~arl~ynDf~~~~~~~~~~~~~~~~~~l~~s~~dr~~ek~~~~~s~~~~~~Kt~~sl~~~~~~GNmYTaSly~~l~sll~ 346 (462)
T KOG1393|consen 267 LARLLYNDFLLNPSQLPESAGLESTLKLDESYTDRDLEKAFIKISKPIFKKKTKPSLLAPRRNGNMYTASLYASLASLLS 346 (462)
T ss_pred HHHhhhhhhhhccccccccccccccccccccccchHHHHHHHHHhHHHHHhhccceeEeeccCCccccHHHHHHHHHHHh
Confidence 111 112222344333334458999999999999999988
Q ss_pred cC--CCCCCCeEEEEeeccchhhhhhhhhhccccC
Q 015082 356 KG--RIKKGDRTWQIAFGSGFKCNSAVWKALRSIN 388 (413)
Q Consensus 356 ~g--~l~~Gd~vll~~~G~G~~~~a~llr~~~~~~ 388 (413)
.. .--.|.+|.++++|+|+.++..-+|+...-+
T Consensus 347 ~~~~d~l~Gkrig~FSYGSGlAAs~fs~~v~~da~ 381 (462)
T KOG1393|consen 347 AVPADELAGKRIGMFSYGSGLAASMFSLRVTQDAT 381 (462)
T ss_pred ccchhhhhccEEEEEeecCcchhheEEEEecCCCC
Confidence 54 3347899999999999988887787776333
No 44
>PF02797 Chal_sti_synt_C: Chalcone and stilbene synthases, C-terminal domain; InterPro: IPR012328 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyze the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group []. This domain of chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in the N-terminal domain. ; GO: 0016746 transferase activity, transferring acyl groups; PDB: 3OV2_A 3OV3_B 1Z1F_A 1Z1E_A 3ALE_C 3OIT_A 2H84_A 1TEE_D 1TED_A 2P0U_A ....
Probab=99.73 E-value=2.5e-17 Score=142.72 Aligned_cols=118 Identities=25% Similarity=0.433 Sum_probs=88.5
Q ss_pred ceeeEecchhhHHhHHhhhhhhhhcCCCccchhHHHHHHHHHHHHHhhh-hccCCCccchhccccEEEecCCChHHHHHH
Q 015082 239 KVGVTLSKNLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFK-MKIKPYIPDFKLAFEHFCIHAGGRAVLDEL 317 (413)
Q Consensus 239 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~al~~~~~~~~~did~~i~hq~~~~~~~~i 317 (413)
++.+.+++++|...++.++..+ .++++ ..+. ..|+.+|++|+++++|++.+
T Consensus 25 Gf~~~Ls~~vP~~i~~~i~~~~----------------------~~~L~~~g~~------~~~~~~wavHPGG~~ILd~v 76 (151)
T PF02797_consen 25 GFHFILSKEVPDLISDNIPPFV----------------------EDLLARHGLS------DWDILFWAVHPGGRKILDAV 76 (151)
T ss_dssp EEEEEE-TTHHHHHHHHHHHHH----------------------HHHHHGGTCC------SGGGSEEEEE-SSHHHHHHH
T ss_pred eEEEEEhhHhHHHHHHHHHHHH----------------------HHHHhhhccc------ccccceeeecCChHHHHHHH
Confidence 4678899999987654333211 12222 1222 23556899999999999999
Q ss_pred HHhcCCCcccchhhHHHHhhhcCCCcchHHHHHHHHHH----cCCCCC---CCeEEEEeeccchhhhhhhhhhc
Q 015082 318 EKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEA----KGRIKK---GDRTWQIAFGSGFKCNSAVWKAL 384 (413)
Q Consensus 318 ~~~lgi~~e~~~~s~~~l~~~Gn~~sasi~i~L~~~~~----~g~l~~---Gd~vll~~~G~G~~~~a~llr~~ 384 (413)
++.||++++++.+|++++++||||+|+++++.|+++++ +|.... ++++++++||||++..++|||..
T Consensus 77 ~~~L~L~~~~l~~Sr~vLr~yGNmSSaTVlfVL~~~~~~~~~~g~~~~~~g~~~gv~~afGPG~t~E~~lLr~~ 150 (151)
T PF02797_consen 77 EEALGLSPEQLRASREVLREYGNMSSATVLFVLERMRRKSAEEGAPPPGEGGEWGVMLAFGPGLTIEGMLLRSV 150 (151)
T ss_dssp HHHHTS-GGGGHHHHHHHHHH-B-GGGHHHHHHHHHHHHHHHTTTSBTTTTBSEEEEEEEETTTEEEEEEEEE-
T ss_pred HHHcCCCHHHHHHHHHHHHhcCCCCCcchHHHHHHHHhhhhhhcccCCCCCCCeEEEEEECCcceEeeEEEeeC
Confidence 99999999999999999999999999999999999887 344433 48999999999999999999853
No 45
>PRK08304 stage V sporulation protein AD; Validated
Probab=99.67 E-value=2.8e-15 Score=143.41 Aligned_cols=117 Identities=21% Similarity=0.204 Sum_probs=97.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCeEEEEccCCCCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHHcC
Q 015082 78 AEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVH 157 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~~g 157 (413)
-.+|+.+|+++||+++|++++|||.+|+++..++ +..+..+++.||+ ++++++ .+|++++.||.+|..+|++|
T Consensus 56 eseLa~eAa~~ALekAGI~~~DID~lI~Gdll~Q--~~sAs~vA~~LGI----Pa~dV~-gACST~~~AL~lAa~lI~SG 128 (337)
T PRK08304 56 ERKMMEDAIQQALQKANLKKSDIDYLLAGDLLNQ--IISANFAARELGI----PFLGLY-GACSTMMESLALGSMLIDGG 128 (337)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCC--cchHHHHHHHhCC----cEEEEe-ccCHHHHHHHHHHHHHHhcC
Confidence 4678899999999999999999999999976443 4578899999987 689999 69999999999999999999
Q ss_pred CCCeEEEEEEccccCC---CccC----CCccchhhhcccccCceEEEEecCCC
Q 015082 158 PNSYALVISMENITLN---WYFG----NDRSKLVSNCLFRMGGAAILLSNRFS 203 (413)
Q Consensus 158 ~~~~vLVv~~e~~s~~---~~~~----~d~~~~~~~~lfGDGAaA~ll~~~~~ 203 (413)
.+++|||+++|+.+.. |..| ..+.. +...++|||+|+||++...
T Consensus 129 ~ad~VLVV~Ssh~s~aerqfr~P~eyg~qrp~--taqwtvtGAGA~i~~~~~~ 179 (337)
T PRK08304 129 FADRVLAATSSHFATAERQFRFPTEYGGQRPP--TAQWTVTGAGAVLLSREGS 179 (337)
T ss_pred CCCEEEEEEcchhhhhhhhccCchhccccCCC--cceEEeeccEEEEEecCCC
Confidence 9999999999998862 3222 12221 2468999999999998754
No 46
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=99.61 E-value=4.1e-14 Score=143.08 Aligned_cols=187 Identities=12% Similarity=0.119 Sum_probs=118.4
Q ss_pred eEEEEeeeeecCCCCccccHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCcee--ecCCcccCCCCCccHHHHHHHHHH
Q 015082 3 FGSISNFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDST--YLPEAVLNIPPNPSMKEARKEAEA 80 (413)
Q Consensus 3 ~v~I~~ig~~lP~~~~~v~~~el~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~--~~~~~~~~~~~~~~ma~~~~~~~~ 80 (413)
.|.|.|+|..+|. -.+.+++++.+..-. +. ++.+.. ++......+. ..........-............+
T Consensus 2 ~i~I~G~g~~~p~---g~~~~~~~~~l~~g~--~~--~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 73 (406)
T cd00834 2 RVVITGLGAVTPL---GNGVEEFWEALLAGR--SG--IRPITR-FDASGFPSRIAGEVPDFDPEDYLDRKELRRMDRFAQ 73 (406)
T ss_pred cEEEECcceeCCC---cCCHHHHHHHHHcCC--Ce--eEECCc-ccccCCCccEEEEcCCCChhhcCCHHHhccCCHHHH
Confidence 4789999999999 368888887764210 00 000000 0001111111 011110000000011111223678
Q ss_pred HHHHHHHHHHHhCCCCCCCcCe----EEEEcc-CC--------------------------CCCCChHHHHHHHcCCCCC
Q 015082 81 VMFGAIDELFAKTSVKPKDIGI----LIVNCS-LF--------------------------NPTPSLSAMVINHYKLRGN 129 (413)
Q Consensus 81 la~~Aa~~aL~~ag~~~~~Id~----li~~s~-~~--------------------------~~~p~~a~~v~~~lGl~~~ 129 (413)
|+.+|+++||+++|++++++|. ++++++ .+ ...+..+.+|+..+|+.
T Consensus 74 l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~-- 151 (406)
T cd00834 74 FALAAAEEALADAGLDPEELDPERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIRLGLR-- 151 (406)
T ss_pred HHHHHHHHHHHHcCCCcccCCccceEEEEccCCcchHHHHHHHHHHHhcCCcccChhHHhhhcccHHHHHHHHHhCCC--
Confidence 9999999999999999877764 555542 11 12245678999999995
Q ss_pred cceEEecCccchhHHHHHHHHHHHHHcCCCCeEEEEEEccccC----------------------CCccCCCccchhhhc
Q 015082 130 IISYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENITL----------------------NWYFGNDRSKLVSNC 187 (413)
Q Consensus 130 ~~~~~v~~~~C~~~~~al~~A~~~i~~g~~~~vLVv~~e~~s~----------------------~~~~~~d~~~~~~~~ 187 (413)
.+.+.++ .+|++++.||..|..+|++|.++++||+++|..+. ...+.+... ...
T Consensus 152 g~~~~v~-~acas~~~Al~~A~~~i~~G~~d~aLvgg~d~~~~p~~~~~~~~~~~l~~~~~~p~~~~~pf~~~~---~g~ 227 (406)
T cd00834 152 GPNYTVS-TACASGAHAIGDAARLIRLGRADVVIAGGAEALITPLTLAGFAALRALSTRNDDPEKASRPFDKDR---DGF 227 (406)
T ss_pred Ccccccc-hHHHHHHHHHHHHHHHHHcCCCCEEEEcCcccccCHHHHHHHHhcCCcCCCCCCCccCCCCCCCCC---CCE
Confidence 5888999 79999999999999999999999999999998761 011111111 247
Q ss_pred ccccCceEEEEecCCC
Q 015082 188 LFRMGGAAILLSNRFS 203 (413)
Q Consensus 188 lfGDGAaA~ll~~~~~ 203 (413)
++||||+|+||++.+.
T Consensus 228 ~~geGA~a~vL~~~~~ 243 (406)
T cd00834 228 VLGEGAGVLVLESLEH 243 (406)
T ss_pred eeeccEEEEEEecHHH
Confidence 8999999999997654
No 47
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=99.60 E-value=1.5e-14 Score=145.32 Aligned_cols=94 Identities=13% Similarity=0.194 Sum_probs=84.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCeEEEEcc-CCCCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHHc
Q 015082 78 AEAVMFGAIDELFAKTSVKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQV 156 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~-~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~~ 156 (413)
..+|+.+|+++||+++|++++|||.||+++. +++..|..+..++..||+++++++++++ ++|++++.+|..|.++|++
T Consensus 22 ~~~La~~A~~~AL~dAgl~~~dID~vi~~~~~~~~~~~~~a~~v~~~lGl~~~~~~~~v~-~~c~s~~~al~~A~~~I~s 100 (386)
T cd00751 22 ADDLGAAVIKALLERAGLDPEEVDDVIMGNVLQAGEGQNPARQAALLAGLPESVPATTVN-RVCGSGLQAVALAAQSIAA 100 (386)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCchhhhc-cccHHHHHHHHHHHHHHHC
Confidence 4688899999999999999999999999864 5555677888899999997447899999 7999999999999999999
Q ss_pred CCCCeEEEEEEccccC
Q 015082 157 HPNSYALVISMENITL 172 (413)
Q Consensus 157 g~~~~vLVv~~e~~s~ 172 (413)
|.+++|||+++|++|.
T Consensus 101 G~~~~vLv~g~e~~s~ 116 (386)
T cd00751 101 GEADVVVAGGVESMSR 116 (386)
T ss_pred CCCCeEEEeeeecccc
Confidence 9999999999998753
No 48
>PRK09051 beta-ketothiolase; Provisional
Probab=99.58 E-value=6.8e-14 Score=140.60 Aligned_cols=94 Identities=17% Similarity=0.226 Sum_probs=82.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCeEEEEcc-CCCCC-CChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHH
Q 015082 78 AEAVMFGAIDELFAKTSVKPKDIGILIVNCS-LFNPT-PSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQ 155 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~-~~~~~-p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~ 155 (413)
..+|+.+|++++|+++|++++|||.||+++. ++... +..+..++..+|+++++++++|+ ++|++++.|+..|.++|+
T Consensus 27 ~~eL~~~A~~~AL~~agi~~~dID~vi~g~~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~V~-~aCaSg~~Al~~A~~~I~ 105 (394)
T PRK09051 27 PTDLGATVVREALARAGVDPDQVGHVVFGHVIPTEPRDMYLSRVAAINAGVPQETPAFNVN-RLCGSGLQAIVSAAQAIL 105 (394)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEeeeccccCCCccHHHHHHHHcCCCCCCceEEec-ccchHHHHHHHHHHHHHH
Confidence 5688899999999999999999999999964 44433 35667777888997568999999 799999999999999999
Q ss_pred cCCCCeEEEEEEccccC
Q 015082 156 VHPNSYALVISMENITL 172 (413)
Q Consensus 156 ~g~~~~vLVv~~e~~s~ 172 (413)
+|..++|||+++|++|.
T Consensus 106 sG~~d~vLvvG~E~mS~ 122 (394)
T PRK09051 106 LGDADVAIGGGAESMSR 122 (394)
T ss_pred cCCCCEEEEEeehhccc
Confidence 99999999999998875
No 49
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=99.57 E-value=6.5e-14 Score=140.92 Aligned_cols=94 Identities=17% Similarity=0.228 Sum_probs=84.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCeEEEEcc-CCCCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHHc
Q 015082 78 AEAVMFGAIDELFAKTSVKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQV 156 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~-~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~~ 156 (413)
..+|+.+|++++|+++|++++|||.||+++. +....+..+..++..+|++..+++++|+ ++|++++.++..|.++|++
T Consensus 26 ~~~La~~A~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~a~~va~~lGl~~~~p~~~V~-~~Casg~~ai~~A~~~I~s 104 (393)
T PRK05656 26 AVELGAAVIRRLLEQTGLDPAQVDEVILGQVLTAGAGQNPARQAAIKAGLPHSVPAMTLN-KVCGSGLKALHLAAQAIRC 104 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCCCCCcHHHHHHHHcCCCCCcceEEec-ccchhHHHHHHHHHHHHHc
Confidence 4688899999999999999999999999975 4333566788999999998458999999 7999999999999999999
Q ss_pred CCCCeEEEEEEccccC
Q 015082 157 HPNSYALVISMENITL 172 (413)
Q Consensus 157 g~~~~vLVv~~e~~s~ 172 (413)
|..+++||+++|++|.
T Consensus 105 G~~d~vLv~G~E~ms~ 120 (393)
T PRK05656 105 GDAEVIIAGGQENMSL 120 (393)
T ss_pred CCCCEEEEEEEhhhcc
Confidence 9999999999997764
No 50
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=99.57 E-value=1.1e-13 Score=140.73 Aligned_cols=122 Identities=15% Similarity=0.158 Sum_probs=94.4
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCcC----eEEEEcc-CCCC-------------------CCChHHHHHHHcCCCCCcce
Q 015082 77 EAEAVMFGAIDELFAKTSVKPKDIG----ILIVNCS-LFNP-------------------TPSLSAMVINHYKLRGNIIS 132 (413)
Q Consensus 77 ~~~~la~~Aa~~aL~~ag~~~~~Id----~li~~s~-~~~~-------------------~p~~a~~v~~~lGl~~~~~~ 132 (413)
....|+.+|+++||+++|+++++|| .|++++. .++. .+..+..++..+|+. .++
T Consensus 86 ~~~~l~~~aa~~Al~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lgl~--g~~ 163 (424)
T smart00825 86 PQQRLLLEVAWEALEDAGIDPESLRGSRTGVFVGAMSSDYAELLARDPEDIEGYAATGTARSFIANRISYFFDLR--GPS 163 (424)
T ss_pred HHHHHHHHHHHHHHHHcCCChhHcCCCCCEEEEEEcHHHHHHHHhhCccccchhhhccchhHHHHHHHHHHhCCC--CCc
Confidence 3567999999999999999999999 7888753 2221 334677899999996 488
Q ss_pred EEecCccchhHHHHHHHHHHHHHcCCCCeEEEEEEccccCC----------C------ccCCCccchhhhcccccCceEE
Q 015082 133 YNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENITLN----------W------YFGNDRSKLVSNCLFRMGGAAI 196 (413)
Q Consensus 133 ~~v~~~~C~~~~~al~~A~~~i~~g~~~~vLVv~~e~~s~~----------~------~~~~d~~~~~~~~lfGDGAaA~ 196 (413)
+.+. .+|++++.||..|.++|++|.++.+||+++|..... + ..+-|.. -...++||||+|+
T Consensus 164 ~~v~-~acasg~~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~--~~g~~~geGAaal 240 (424)
T smart00825 164 VTVD-TACSSSLVALHLACQSLRSGECDMALAGGVNLILSPDTFVGFSRAGMLSPDGRCKTFDAD--ADGYVRGEGVGVV 240 (424)
T ss_pred cccc-cHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeecCCHHHHHHHhhcCCCCCCCCCCCCCCC--CCcccccceEEEE
Confidence 9999 799999999999999999999999999999974320 0 0111111 0246899999999
Q ss_pred EEecCCC
Q 015082 197 LLSNRFS 203 (413)
Q Consensus 197 ll~~~~~ 203 (413)
||++.+.
T Consensus 241 VLe~~e~ 247 (424)
T smart00825 241 VLKRLSD 247 (424)
T ss_pred EEccHHH
Confidence 9997543
No 51
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=99.51 E-value=6.8e-13 Score=133.60 Aligned_cols=93 Identities=16% Similarity=0.131 Sum_probs=82.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCeEEEEcc-CCCC--CCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHH
Q 015082 78 AEAVMFGAIDELFAKTSVKPKDIGILIVNCS-LFNP--TPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLL 154 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~-~~~~--~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i 154 (413)
..+|+.+|++++|+++|+++++||.|+++++ ++.. .+..+..++..+|++ ..++++++ ++|++++.++..|..+|
T Consensus 22 ~~eLa~~a~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~~~a~~va~~lGl~-~~~~~~v~-~aCasg~~ai~~A~~~I 99 (389)
T PRK06064 22 LRDLAVEAGLEALEDAGIDGKDIDAMYVGNMSAGLFVSQEHIAALIADYAGLA-PIPATRVE-AACASGGAALRQAYLAV 99 (389)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccccccHHHHHHHHcCCC-CCCeeEEe-CCcHHHHHHHHHHHHHH
Confidence 4688899999999999999999999998864 4432 466788999999998 68999999 79999999999999999
Q ss_pred HcCCCCeEEEEEEccccC
Q 015082 155 QVHPNSYALVISMENITL 172 (413)
Q Consensus 155 ~~g~~~~vLVv~~e~~s~ 172 (413)
++|.+++|||+++|++|.
T Consensus 100 ~sG~~~~vLv~G~e~~s~ 117 (389)
T PRK06064 100 ASGEADVVLAAGVEKMTD 117 (389)
T ss_pred HCCCCCEEEEEEEEeccc
Confidence 999999999999997653
No 52
>PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways. The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. Acyl-[ACP] + malonyl-[ACP] = 3-oxoacyl-[ACP] + CO(2) + [ACP] The oxoacyl-ACP formed by this reaction subsequently enters the elongation cycle, where the acyl chain is progressively lengthened by the combined activities of several enzymes. The enzymes studied so far are homodimers, where each monomer consists of two domains (N-terminal and C-terminal) which are similar in structure, but not in sequence [, ]. This entry represents a conserved region within the N-terminal domain.; GO: 0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity, 0006633 fatty acid biosynthetic process; PDB: 1ZOW_C 1UB7_B 3IL7_A 3IL3_A 2X3E_B 4DFE_C 3LED_B 3ROW_B 3S23_A 3S1Z_A ....
Probab=99.50 E-value=2.7e-14 Score=110.87 Aligned_cols=66 Identities=24% Similarity=0.384 Sum_probs=55.9
Q ss_pred EEecCccchhHHHHHHHHHHHHHcCCCCeEEEEEEccccCCCccCCCccchhhhcccccCceEEEEecCCC
Q 015082 133 YNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENITLNWYFGNDRSKLVSNCLFRMGGAAILLSNRFS 203 (413)
Q Consensus 133 ~~v~~~~C~~~~~al~~A~~~i~~g~~~~vLVv~~e~~s~~~~~~~d~~~~~~~~lfGDGAaA~ll~~~~~ 203 (413)
||++ ++|+|++.||++|..+|++|..++||||++|+.+. +.++.++.+ ..+|||||+|+||+++++
T Consensus 1 fDi~-~~C~g~~~al~~A~~~i~~g~~~~~Lvv~~d~~s~-~~~~~~~~~---~~~~gDgAaA~vl~~~~~ 66 (80)
T PF08545_consen 1 FDIN-QACAGFLYALDVAAALIASGRAKNALVVGGDRLSR-IVDRTDRQT---AFIFGDGAAAVVLSRDEE 66 (80)
T ss_dssp EEEE--GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEEGGG-GSHTTHHHH---HTTB-EEEEEEEEEEESS
T ss_pred Cccc-ccchHHHHHHHHHHHHHhhccCCEEEEEeeccccc-cccccccCc---ceeecchheEEEEEecCC
Confidence 7999 79999999999999999999999999999999998 666666553 468999999999999754
No 53
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=99.49 E-value=1.5e-12 Score=130.37 Aligned_cols=93 Identities=13% Similarity=0.108 Sum_probs=84.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCeEEEEcc-CCCCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHHc
Q 015082 78 AEAVMFGAIDELFAKTSVKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQV 156 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~-~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~~ 156 (413)
..+|+.+|++++|+++|+++++||.++++++ +....+..+..++..+|++ .++.++++ .+|++++.++..|.++|++
T Consensus 16 ~~eL~~~A~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~a~~va~~lGl~-~~~~~~v~-~~c~sg~~al~~Aa~~I~s 93 (375)
T cd00829 16 PLELAAEAARAALDDAGLEPADIDAVVVGNAAGGRFQSFPGALIAEYLGLL-GKPATRVE-AAGASGSAAVRAAAAAIAS 93 (375)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecccccccccchHHHHHHHcCCC-CcceeeEe-CccHHHHHHHHHHHHHHHh
Confidence 5688899999999999999999999999865 4433577889999999997 78999999 7999999999999999999
Q ss_pred CCCCeEEEEEEccccC
Q 015082 157 HPNSYALVISMENITL 172 (413)
Q Consensus 157 g~~~~vLVv~~e~~s~ 172 (413)
|.++.|||+++|+++.
T Consensus 94 G~~~~vlv~g~e~~s~ 109 (375)
T cd00829 94 GLADVVLVVGAEKMSD 109 (375)
T ss_pred CCCCEEEEEEEeeccc
Confidence 9999999999998774
No 54
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=99.49 E-value=1.1e-12 Score=132.83 Aligned_cols=123 Identities=12% Similarity=0.061 Sum_probs=91.9
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCC-cC----eEEEEccC-----------------------CCCC--CChHHHHHHHcCC
Q 015082 77 EAEAVMFGAIDELFAKTSVKPKD-IG----ILIVNCSL-----------------------FNPT--PSLSAMVINHYKL 126 (413)
Q Consensus 77 ~~~~la~~Aa~~aL~~ag~~~~~-Id----~li~~s~~-----------------------~~~~--p~~a~~v~~~lGl 126 (413)
....|+..|+++||+++|+++++ ++ .++++++. .... ...+..++..+|+
T Consensus 71 ~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (407)
T cd00828 71 RTTLLALVATEEALADAGITDPYEVHPSEVGVVVGSGMGGLRFLRRGGKLDARAVNPYVSPKWMLSPNTVAGWVNILLLS 150 (407)
T ss_pred HHHHHHHHHHHHHHHhCCCCccccCCccCeEEEEeeccCCHHHHHHHHHHHhhccCCcccchhccccchHHHHHHHHhCc
Confidence 46789999999999999998866 44 34455421 0111 4567889999999
Q ss_pred CCCcceEEecCccchhHHHHHHHHHHHHHcCCCCeEEEEEEccccC--------------------CCccCCCccchhhh
Q 015082 127 RGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENITL--------------------NWYFGNDRSKLVSN 186 (413)
Q Consensus 127 ~~~~~~~~v~~~~C~~~~~al~~A~~~i~~g~~~~vLVv~~e~~s~--------------------~~~~~~d~~~~~~~ 186 (413)
. ..+.+.+. .+|++++.||..|.++|++|.++.+||+++|..+. ...++-|+.. ..
T Consensus 151 ~-~Gp~~tv~-~aCaS~~~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~f~~~~~ls~~~~~~~~~~~pfd~~~--~G 226 (407)
T cd00828 151 S-HGPIKTPV-GACATALEALDLAVEAIRSGKADIVVVGGVEDPLEEGLSGFANMGALSTAEEEPEEMSRPFDETR--DG 226 (407)
T ss_pred C-CCCCcCcc-cHHHHHHHHHHHHHHHHHcCCCCEEEEccccccChHHHHHHHHcCCCCCCCCCCCcccCCCcCCC--Cc
Confidence 4 36889999 79999999999999999999999999999998651 0011112111 25
Q ss_pred cccccCceEEEEecCCC
Q 015082 187 CLFRMGGAAILLSNRFS 203 (413)
Q Consensus 187 ~lfGDGAaA~ll~~~~~ 203 (413)
+++||||+++||++.+.
T Consensus 227 ~~~gEGAaalvLe~~~~ 243 (407)
T cd00828 227 FVEAEGAGVLVLERAEL 243 (407)
T ss_pred EEeecceEEEEEeeHHH
Confidence 78999999999998654
No 55
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=99.48 E-value=1.5e-12 Score=130.78 Aligned_cols=92 Identities=15% Similarity=0.066 Sum_probs=79.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCeEEEEccCCCCC--CChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHH
Q 015082 78 AEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPT--PSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQ 155 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~--p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~ 155 (413)
..+|+.+|+++||+++|++++|||.|++++++++.. ...+..+++.||+. ..++++++ .+|+++..+++.|.++|+
T Consensus 24 ~~eL~~eAa~~Al~dAgl~~~dID~iv~~~~~~~~~~~~~~~~~va~~LGl~-~~~~~~v~-~~casg~~al~~A~~~I~ 101 (386)
T PRK08313 24 MAGLVREAIDRALADAGLTWDDIDAVVVGKAPDFFEGVMMPELFLADALGAT-GKPLIRVH-TAGSVGGSTAVVAASLVQ 101 (386)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEeccccccccccCchHHHHHhcCCC-CCceEEEe-ccCHHHHHHHHHHHHHHH
Confidence 468889999999999999999999999887543321 23347899999997 58899999 799999999999999999
Q ss_pred cCCCCeEEEEEEcccc
Q 015082 156 VHPNSYALVISMENIT 171 (413)
Q Consensus 156 ~g~~~~vLVv~~e~~s 171 (413)
+|.+++||||++|+++
T Consensus 102 sG~~~~vLVvg~e~~s 117 (386)
T PRK08313 102 SGVYRRVLAVAWEKQS 117 (386)
T ss_pred CCCCCEEEEEEEEEcc
Confidence 9999999999999764
No 56
>PRK05790 putative acyltransferase; Provisional
Probab=99.46 E-value=2.1e-12 Score=130.26 Aligned_cols=93 Identities=13% Similarity=0.164 Sum_probs=79.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCeEEEEcc-CCCCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHHc
Q 015082 78 AEAVMFGAIDELFAKTSVKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQV 156 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~-~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~~ 156 (413)
..+|+.+|+++||+++|++++|||.|++++. +....+..+..++..+|++..+++++++ ++|++++.++..|.++|++
T Consensus 26 ~~~La~~A~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~gl~~~~~~~~v~-~~Casg~~al~~A~~~I~s 104 (393)
T PRK05790 26 AVELGAIVIKAALERAGVPPEQVDEVIMGQVLQAGAGQNPARQAALKAGLPVEVPALTIN-KVCGSGLKAVALAAQAIRA 104 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCeEEEEEecCCCCCCcHHHHHHHHcCCCCCCceeeec-ccchHHHHHHHHHHHHHHc
Confidence 5688899999999999999999999998864 3222445566677788997557899999 7999999999999999999
Q ss_pred CCCCeEEEEEEcccc
Q 015082 157 HPNSYALVISMENIT 171 (413)
Q Consensus 157 g~~~~vLVv~~e~~s 171 (413)
|.+++|||+++|++|
T Consensus 105 G~~d~vLv~G~e~~s 119 (393)
T PRK05790 105 GDADIVVAGGQESMS 119 (393)
T ss_pred CCCCEEEEEeeeccc
Confidence 999999999999864
No 57
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=99.46 E-value=3.2e-12 Score=129.38 Aligned_cols=188 Identities=10% Similarity=0.033 Sum_probs=115.7
Q ss_pred eEEEEeeeeecCCCCccccHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCceee--cCCcccCCCCCccHHHHHHHHHH
Q 015082 3 FGSISNFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDSTY--LPEAVLNIPPNPSMKEARKEAEA 80 (413)
Q Consensus 3 ~v~I~~ig~~lP~~~~~v~~~el~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~--~~~~~~~~~~~~~ma~~~~~~~~ 80 (413)
.|.|.|+|...|. -.+.+++++.+..-. +. ++.+.+ +...+...+.. ..+......-...-........+
T Consensus 2 ~v~ItG~g~~~p~---g~~~~~~~~~l~~g~--s~--~~~~~~-~~~~~~~~~~~g~i~~f~~~~~~~~~~~~~~~~~~~ 73 (407)
T TIGR03150 2 RVVVTGLGAVTPL---GNGVEEFWENLLAGK--SG--IGPITR-FDASDLPVKIAGEVKDFDPEDYIDKKEARRMDRFIQ 73 (407)
T ss_pred cEEEEcceEECCC---cCCHHHHHHHHHcCC--Ce--eEECCc-ccccCCCCcEEEEeCCcChhhcCCHHHHhhcCHHHH
Confidence 4789999999999 368999998775310 00 000000 00011111110 00000000000000111123578
Q ss_pred HHHHHHHHHHHhCCCCCCCcCe----EEEEccC-CC-------------------------CCC-ChHHHHHHHcCCCCC
Q 015082 81 VMFGAIDELFAKTSVKPKDIGI----LIVNCSL-FN-------------------------PTP-SLSAMVINHYKLRGN 129 (413)
Q Consensus 81 la~~Aa~~aL~~ag~~~~~Id~----li~~s~~-~~-------------------------~~p-~~a~~v~~~lGl~~~ 129 (413)
|+.+|+++||+++|++++++|. +++++.. .. ..+ ..+.++...+|+.
T Consensus 74 l~~~aa~~Al~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~-- 151 (407)
T TIGR03150 74 YALAAAKEAVEDSGLDIEEEDAERVGVIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIRYGAK-- 151 (407)
T ss_pred HHHHHHHHHHHhcCCCcccCCccceEEEEecCCCchHHHHHHHHHHHhcCccccChhhhhcccccHHHHHHHHHhCCC--
Confidence 9999999999999999999986 6665421 00 011 2456788899995
Q ss_pred cceEEecCccchhHHHHHHHHHHHHHcCCCCeEEEEEEccccCC-----------C----------ccCCCccchhhhcc
Q 015082 130 IISYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENITLN-----------W----------YFGNDRSKLVSNCL 188 (413)
Q Consensus 130 ~~~~~v~~~~C~~~~~al~~A~~~i~~g~~~~vLVv~~e~~s~~-----------~----------~~~~d~~~~~~~~l 188 (413)
.+.+.+. .+|++++.||..|..+|++|.++.+||+++|.+... + .++-|... ...+
T Consensus 152 g~~~~v~-~acaSg~~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~--~g~~ 228 (407)
T TIGR03150 152 GPNHAVV-TACATGTHAIGDAFRLIQRGDADVMIAGGAEAAITPLGIAGFAAMKALSTRNDDPEKASRPFDKDR--DGFV 228 (407)
T ss_pred Ccccccc-cHHHHHHHHHHHHHHHHhcCCCCEEEEecccCcCCHHHHHHHHHhCcccCCCCCCCcCCCCCcCCC--CcEE
Confidence 6788899 699999999999999999999999999999963210 0 00111110 2467
Q ss_pred cccCceEEEEecCCC
Q 015082 189 FRMGGAAILLSNRFS 203 (413)
Q Consensus 189 fGDGAaA~ll~~~~~ 203 (413)
.||||+|+||++.+.
T Consensus 229 ~gEGAaalvL~~~~~ 243 (407)
T TIGR03150 229 MGEGAGVLVLEELEH 243 (407)
T ss_pred EeceEEEEEEeeHHH
Confidence 999999999997653
No 58
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=99.44 E-value=3.5e-12 Score=128.11 Aligned_cols=94 Identities=15% Similarity=0.164 Sum_probs=83.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCeEEEEcc-CCCC-CCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHH
Q 015082 78 AEAVMFGAIDELFAKTSVKPKDIGILIVNCS-LFNP-TPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQ 155 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~-~~~~-~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~ 155 (413)
..||+.+|++++|+++|+.+++||.++++++ ++.. .+.++..++..+|++..++++.|+ ++|++++.|+..|...|+
T Consensus 27 ~~eLa~~A~~~AL~~ag~~~~dID~vi~g~~~~~~~~g~~~a~~~~~~lGl~~~~p~~~V~-~aCaSG~~Al~~A~~~I~ 105 (391)
T PRK07661 27 PDDLGALVVKETLKRAGNYEGPIDDLIIGCAMPEAEQGLNMARNIGALAGLPYTVPAITIN-RYCSSGLQSIAYGAERIM 105 (391)
T ss_pred HHHHHHHHHHHHHHhcCCChhHCCEEEEEeccccccccchHHHHHHHHcCCCCCcceeehh-hhhhHHHHHHHHHHHHHH
Confidence 4689999999999999988899999999964 4422 366788899999998559999999 799999999999999999
Q ss_pred cCCCCeEEEEEEccccC
Q 015082 156 VHPNSYALVISMENITL 172 (413)
Q Consensus 156 ~g~~~~vLVv~~e~~s~ 172 (413)
+|.++.+||+++|++|.
T Consensus 106 sG~~d~vLv~G~E~ms~ 122 (391)
T PRK07661 106 LGHSEAVIAGGAESMSL 122 (391)
T ss_pred cCCCCEEEEEEEeeccc
Confidence 99999999999998774
No 59
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=99.43 E-value=1.2e-11 Score=125.74 Aligned_cols=122 Identities=17% Similarity=0.172 Sum_probs=93.2
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCcCe----EEEEcc-CCC-------------------CCCChHHHHHHHcCCCCCcce
Q 015082 77 EAEAVMFGAIDELFAKTSVKPKDIGI----LIVNCS-LFN-------------------PTPSLSAMVINHYKLRGNIIS 132 (413)
Q Consensus 77 ~~~~la~~Aa~~aL~~ag~~~~~Id~----li~~s~-~~~-------------------~~p~~a~~v~~~lGl~~~~~~ 132 (413)
...+|+.+|+++||+++|+++++++. +++++. .++ ..+..+..++..+|+. .++
T Consensus 86 ~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~gl~--g~~ 163 (421)
T cd00833 86 PQQRLLLEVAWEALEDAGYSPESLAGSRTGVFVGASSSDYLELLARDPDEIDAYAATGTSRAFLANRISYFFDLR--GPS 163 (421)
T ss_pred HHHHHHHHHHHHHHHHcCCCchhcCCCCceEEeCcCHHHHHHHHhhcccccCcccccCcchHHHHHHHHHHcCCC--CCc
Confidence 36789999999999999999888774 666643 111 1134677899999996 588
Q ss_pred EEecCccchhHHHHHHHHHHHHHcCCCCeEEEEEEccccCC----------------CccCCCccchhhhcccccCceEE
Q 015082 133 YNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENITLN----------------WYFGNDRSKLVSNCLFRMGGAAI 196 (413)
Q Consensus 133 ~~v~~~~C~~~~~al~~A~~~i~~g~~~~vLVv~~e~~s~~----------------~~~~~d~~~~~~~~lfGDGAaA~ 196 (413)
+.+. .+|++++.||..|..+|++|.++.+||+++|.+... ...+-|.. -...++||||+|+
T Consensus 164 ~~v~-~acas~~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~--~~g~~~geGAaal 240 (421)
T cd00833 164 LTVD-TACSSSLVALHLACQSLRSGECDLALVGGVNLILSPDMFVGFSKAGMLSPDGRCRPFDAD--ADGYVRGEGVGVV 240 (421)
T ss_pred eeec-cHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeccCCHHHHHHHhhCCCCCCCCCCCCCCCC--CCCeeeeceEEEE
Confidence 9999 699999999999999999999999999999975310 01111111 0246899999999
Q ss_pred EEecCCC
Q 015082 197 LLSNRFS 203 (413)
Q Consensus 197 ll~~~~~ 203 (413)
||++.+.
T Consensus 241 vL~~~~~ 247 (421)
T cd00833 241 VLKRLSD 247 (421)
T ss_pred EEeeHHH
Confidence 9997654
No 60
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=99.42 E-value=5.5e-12 Score=127.04 Aligned_cols=94 Identities=19% Similarity=0.245 Sum_probs=75.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCeEEEEcc-CCCCCC-ChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHH
Q 015082 78 AEAVMFGAIDELFAKTSVKPKDIGILIVNCS-LFNPTP-SLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQ 155 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~-~~~~~p-~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~ 155 (413)
..+|+.+|++++|+++|++++|||.+++++. ++...+ ..+....-..+++..+++++|+ ++|++++.++..|.++|+
T Consensus 32 ~~~L~~~a~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~l~a~~~~~~p~~~V~-~~CaSg~~ai~~A~~~I~ 110 (394)
T PRK06445 32 PEELAAMLINRLIEKTGIKPEEIDDIITGCALQVGENWLYGGRHPIFLARLPYNIPAMAVD-RQCASSLTTVSIGAMEIA 110 (394)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCeeEEEeecCCCcccccHHHHHHHHcCCCCCCcchhhh-hhhHHHHHHHHHHHHHHH
Confidence 5688999999999999999999999999874 433222 2233322233334468999999 799999999999999999
Q ss_pred cCCCCeEEEEEEccccC
Q 015082 156 VHPNSYALVISMENITL 172 (413)
Q Consensus 156 ~g~~~~vLVv~~e~~s~ 172 (413)
+|.+++|||+++|++|.
T Consensus 111 sG~~d~vLv~G~e~ms~ 127 (394)
T PRK06445 111 TGMADIVIAGGVEHMTR 127 (394)
T ss_pred cCCCCEEEEeeeccccc
Confidence 99999999999998763
No 61
>PRK12404 stage V sporulation protein AD; Provisional
Probab=99.41 E-value=1.4e-11 Score=117.51 Aligned_cols=119 Identities=15% Similarity=0.208 Sum_probs=91.9
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCcCeEEEEccCCCCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHH
Q 015082 76 KEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQ 155 (413)
Q Consensus 76 ~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~ 155 (413)
+.-.+|+.+|+++||+++|++++|||.++.++..+...|+ ..+++.||++ .+++. ++|+++..||.+|..+|+
T Consensus 52 kAE~~L~~EA~~~AL~kAGI~~~DID~i~vGdL~nQ~ips--sfvar~LGIP----~~gV~-gACSTg~eAL~lAa~~Va 124 (334)
T PRK12404 52 KAERKLLEEACSRAIEKAKLRKEDIQFFLAGDLMNQITPT--SFAARTLGIP----YLGLF-GACSTSMEGLALAALIVN 124 (334)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCcCcH--HHHHHHhCCC----cccee-ecCHHHHHHHHHHHHHHH
Confidence 4456899999999999999999999999999765554554 5999999965 48999 699999999999999999
Q ss_pred cCCCCeEEEEEEccccC---CCccC----CCccchhhhcccccCceEEEEecCCC
Q 015082 156 VHPNSYALVISMENITL---NWYFG----NDRSKLVSNCLFRMGGAAILLSNRFS 203 (413)
Q Consensus 156 ~g~~~~vLVv~~e~~s~---~~~~~----~d~~~~~~~~lfGDGAaA~ll~~~~~ 203 (413)
+|.+++|||+++.+... .|.-| ..|.. +...--=||+|+||++...
T Consensus 125 SG~Ad~VLavtsSH~~~aErqfR~P~eyG~Qrp~--taqwTvTgaga~~l~~~~~ 177 (334)
T PRK12404 125 SGGAKYVLTGASSHNAAVEKQFRYPTEYGGQKPP--TAQWTVTGAGAAILSKTGD 177 (334)
T ss_pred cCCCCEEEEEeCcccchhhhhccCcccccCcCCC--cccEEEEceEEEEEecCCC
Confidence 99999999999877553 22111 11210 1122234899999997654
No 62
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.41 E-value=1.7e-11 Score=124.74 Aligned_cols=182 Identities=15% Similarity=0.144 Sum_probs=113.0
Q ss_pred eEEEEeeeeecCCCCccccHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCceeecCCcccCCCCCccHHHHHHHHHHHH
Q 015082 3 FGSISNFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDSTYLPEAVLNIPPNPSMKEARKEAEAVM 82 (413)
Q Consensus 3 ~v~I~~ig~~lP~~~~~v~~~el~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~ma~~~~~~~~la 82 (413)
.|.|.|+|...|- -.+.+++.+.+..-. +. ++.+.+ +...++..+....-+.........+ .....++
T Consensus 12 ~VvITG~G~vs~~---G~~~~~~~~~L~~G~--s~--i~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~----~~~~~~~ 79 (425)
T PRK06501 12 IVAVTGMGVVTSL---GQGKADNWAALTAGE--SG--IHTITR-FPTEGLRTRIAGTVDFLPESPFGAS----ALSEALA 79 (425)
T ss_pred CEEEEeeeEECCC---CCCHHHHHHHHHcCC--Cc--eEcCCc-ccccCCCCceEEEEeeccccccccc----CHHHHHH
Confidence 5899999999998 368899988775310 00 000000 1112222221100000000000011 1245688
Q ss_pred HHHHHHHHHhCCCCCCCcC------------------eEEEEcc----------------CC-------CCCCChHHHHH
Q 015082 83 FGAIDELFAKTSVKPKDIG------------------ILIVNCS----------------LF-------NPTPSLSAMVI 121 (413)
Q Consensus 83 ~~Aa~~aL~~ag~~~~~Id------------------~li~~s~----------------~~-------~~~p~~a~~v~ 121 (413)
..|+++||+++|++.++++ .++.++. +. ...+..+.+|+
T Consensus 80 ~~aa~~Al~dAgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~ 159 (425)
T PRK06501 80 RLAAEEALAQAGIGKGDFPGPLFLAAPPVELEWPARFALAAAVGDNDAPSYDRLLRAARGGRFDALHERFQFGSIADRLA 159 (425)
T ss_pred HHHHHHHHHHcCCCccccccceeeccccccCCCCceEEEEEecCCccHHHHHHHHhhcCcccCChhhhhhcccHHHHHHH
Confidence 9999999999999654322 1112111 01 13456788999
Q ss_pred HHcCCCCCcceEEecCccchhHHHHHHHHHHHHHcCCCCeEEEEEEcc---------------ccCCC------ccC--C
Q 015082 122 NHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMEN---------------ITLNW------YFG--N 178 (413)
Q Consensus 122 ~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~~g~~~~vLVv~~e~---------------~s~~~------~~~--~ 178 (413)
.++|+. .++++++ .+|++++.||..|.++|++|.++.+||+++|. ++... .++ .
T Consensus 160 ~~~gl~--G~~~~i~-~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~ 236 (425)
T PRK06501 160 DRFGTR--GLPISLS-TACASGATAIQLGVEAIRRGETDRALCIATDGSVSAEALIRFSLLSALSTQNDPPEKASKPFSK 236 (425)
T ss_pred HHhCCC--CCceeec-CccHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHhhccccCCCCCCcccCCCCC
Confidence 999995 6889999 79999999999999999999999999999993 22200 011 2
Q ss_pred CccchhhhcccccCceEEEEecCCC
Q 015082 179 DRSKLVSNCLFRMGGAAILLSNRFS 203 (413)
Q Consensus 179 d~~~~~~~~lfGDGAaA~ll~~~~~ 203 (413)
++. ..++||||+|+||++.+.
T Consensus 237 ~r~----G~v~GEGaaalVLe~~~~ 257 (425)
T PRK06501 237 DRD----GFVMAEGAGALVLESLES 257 (425)
T ss_pred CCC----CeeeeccEEEEEECcHHH
Confidence 233 478999999999998654
No 63
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.41 E-value=1.2e-11 Score=125.43 Aligned_cols=189 Identities=8% Similarity=0.005 Sum_probs=118.1
Q ss_pred CceEEEEeeeeecCCCCccccHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCceee--cCCcccC-CCCCccHHHHHHH
Q 015082 1 MIFGSISNFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDSTY--LPEAVLN-IPPNPSMKEARKE 77 (413)
Q Consensus 1 ~~~v~I~~ig~~lP~~~~~v~~~el~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~--~~~~~~~-~~~~~~ma~~~~~ 77 (413)
|=.|.|.|+|...|. -.+.+++++.+..-. +. ++.+.+ +...+...+.. ..+.... .-+.. -......
T Consensus 1 m~~v~ItG~g~~~p~---g~~~~~~w~~l~~g~--~~--~~~~~~-~~~~~~~~~~~g~i~~f~~~~~~~~~-~~~~~~~ 71 (411)
T PRK07314 1 KRRVVVTGLGAVSPL---GNDVESTWKNLLAGK--SG--IGPITH-FDTSDLAVKIAGEVKDFNPDDYMSRK-EARRMDR 71 (411)
T ss_pred CCcEEEEcceEECCC---cCCHHHHHHHHHhCC--Cc--EEECCc-ccccCCCccEEEEeCCcChhhcCCHH-HhhcCCH
Confidence 556899999999999 378999998775310 00 000000 00111111110 0000000 00000 0011123
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcC----eEEEEccCC----------------------C----CCC-ChHHHHHHHcCC
Q 015082 78 AEAVMFGAIDELFAKTSVKPKDIG----ILIVNCSLF----------------------N----PTP-SLSAMVINHYKL 126 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~~Id----~li~~s~~~----------------------~----~~p-~~a~~v~~~lGl 126 (413)
..+|+..|+++||+++|++++++| .++++++.. . ..+ ..+.++...+|+
T Consensus 72 ~~~l~~~aa~~Al~dAGl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 151 (411)
T PRK07314 72 FIQYGIAAAKQAVEDAGLEITEENADRIGVIIGSGIGGLETIEEQHITLLEKGPRRVSPFFVPMAIINMAAGHVSIRYGA 151 (411)
T ss_pred HHHHHHHHHHHHHHHcCCCcccCCcccEEEEEecCcCChHHHHHHHHHHHhcCccccChhhhhhhcchHHHHHHHHHhCC
Confidence 568999999999999999999888 466664310 0 011 246688999999
Q ss_pred CCCcceEEecCccchhHHHHHHHHHHHHHcCCCCeEEEEEEccccCCC---------------------ccCCCccchhh
Q 015082 127 RGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENITLNW---------------------YFGNDRSKLVS 185 (413)
Q Consensus 127 ~~~~~~~~v~~~~C~~~~~al~~A~~~i~~g~~~~vLVv~~e~~s~~~---------------------~~~~d~~~~~~ 185 (413)
. .+.+.+. .+|++++.||..|..+|++|.++.+||+++|..+..+ .++-|+.. .
T Consensus 152 ~--Gp~~tv~-~acaSgl~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~~--d 226 (411)
T PRK07314 152 K--GPNHSIV-TACATGAHAIGDAARLIAYGDADVMVAGGAEAAITPLGIAGFAAARALSTRNDDPERASRPFDKDR--D 226 (411)
T ss_pred C--Cccccch-hhhHHHHHHHHHHHHHHhcCCCCEEEEeeecccCCHHHHHHHHHhccccCCCCCCCcCcCCCcCCC--C
Confidence 5 5788889 6999999999999999999999999999998643200 01111111 2
Q ss_pred hcccccCceEEEEecCCC
Q 015082 186 NCLFRMGGAAILLSNRFS 203 (413)
Q Consensus 186 ~~lfGDGAaA~ll~~~~~ 203 (413)
..++||||+|+||++.+.
T Consensus 227 G~~~geGAaavvL~~~~~ 244 (411)
T PRK07314 227 GFVMGEGAGILVLEELEH 244 (411)
T ss_pred CEeEEceEEEEEEeeHHH
Confidence 468999999999997643
No 64
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=99.35 E-value=1.2e-11 Score=122.56 Aligned_cols=90 Identities=14% Similarity=0.138 Sum_probs=77.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCeEEEEccCCCCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHHcC
Q 015082 78 AEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVH 157 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~~g 157 (413)
+.+|+..|++++++ |++ ++||.||+++.... ....+..++..+|++..++++.|+ ++|++++.++..|...|++|
T Consensus 25 ~~~L~~~a~~~~~~--gi~-~~Id~vi~G~~~~~-~~~~~r~~~~~~Gl~~~~p~~tV~-~~CaSG~~Ai~~a~~~I~sG 99 (361)
T PRK06690 25 VQQLAAPLLTFLSK--GME-REIDDVILGNVVGP-GGNVARLSALEAGLGLHIPGVTID-RQCGAGLEAIRTACHFIQGG 99 (361)
T ss_pred HHHHHHHHHHHHHc--cch-hhcCEEEEEecCCC-cchHHHHHHHHcCCCCCCCceehh-hhhhHHHHHHHHHHHHHHCC
Confidence 57899999999855 886 89999999975321 245566788999998679999999 79999999999999999999
Q ss_pred CCCeEEEEEEccccC
Q 015082 158 PNSYALVISMENITL 172 (413)
Q Consensus 158 ~~~~vLVv~~e~~s~ 172 (413)
..+.+||+++|++|.
T Consensus 100 ~~d~~l~gG~E~ms~ 114 (361)
T PRK06690 100 AGKCYIAGGVESTST 114 (361)
T ss_pred CCCEEEEeccccccC
Confidence 999999999999875
No 65
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=99.31 E-value=8.4e-12 Score=125.45 Aligned_cols=94 Identities=15% Similarity=0.213 Sum_probs=85.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCeEEEEcc-CCCCCC-ChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHH
Q 015082 78 AEAVMFGAIDELFAKTSVKPKDIGILIVNCS-LFNPTP-SLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQ 155 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~-~~~~~p-~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~ 155 (413)
+.+|+.+|++++|+++|+++++||.||+++. ++...+ ..+..++.++|++.++++++|+ ++|+|++.|+.+|.++|+
T Consensus 27 ~~dL~~~A~~~aL~~agi~~~~ID~vi~G~~~~~~~~~~~~a~~i~~~lGl~~~~p~~~V~-~aCaSg~~Al~~A~~~I~ 105 (392)
T PRK07108 27 GATLGGHVVQHAVERAKLDPAEVEDVIMGCANPEGATGANIARQIALRAGLPVTVPGMTVN-RFCSSGLQTIALAAQRVI 105 (392)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCcEEEEEeecccccccHHHHHHHHHcCCCCCCceeeec-chhhHHHHHHHHHHHHHH
Confidence 5688899999999999999999999999964 555444 4889999999998669999999 799999999999999999
Q ss_pred cCCCCeEEEEEEccccC
Q 015082 156 VHPNSYALVISMENITL 172 (413)
Q Consensus 156 ~g~~~~vLVv~~e~~s~ 172 (413)
+|.++.+||+++|++|.
T Consensus 106 sG~~d~vlagGvE~ms~ 122 (392)
T PRK07108 106 AGEGDVFVAGGVESISC 122 (392)
T ss_pred CCCCCEEEEEEEeccCC
Confidence 99999999999999986
No 66
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=99.30 E-value=7.8e-12 Score=125.68 Aligned_cols=94 Identities=18% Similarity=0.266 Sum_probs=84.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCeEEEEcc-CCCCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHHc
Q 015082 78 AEAVMFGAIDELFAKTSVKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQV 156 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~-~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~~ 156 (413)
..+|+.+|+++||+++|++++|||.|++++. ++...|..+..++..+|++.++++++++ ++|++++.+|..|.++|++
T Consensus 21 ~~~La~~A~~~Al~dAgl~~~dID~vv~g~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~-~~Casg~~al~~A~~~I~s 99 (386)
T TIGR01930 21 AEDLGAAVIKELLERNPLDPELIDDVIFGNVLQAGEQQNIARQAALLAGLPESVPAYTVN-RQCASGLQAVILAAQLIRA 99 (386)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCceeeeec-chhhHHHHHHHHHHHHHHC
Confidence 4688899999999999999999999999864 4444577788999999998558999999 7999999999999999999
Q ss_pred CCCCeEEEEEEccccC
Q 015082 157 HPNSYALVISMENITL 172 (413)
Q Consensus 157 g~~~~vLVv~~e~~s~ 172 (413)
|.+++|||+++|++|.
T Consensus 100 G~~~~vLv~g~e~~s~ 115 (386)
T TIGR01930 100 GEADVVVAGGVESMSR 115 (386)
T ss_pred CCCCEEEEEEehhhcc
Confidence 9999999999999775
No 67
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.30 E-value=9.1e-11 Score=119.52 Aligned_cols=121 Identities=16% Similarity=0.140 Sum_probs=88.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCc-C----eEEEEccC-CC---------------------CCC-----ChHHHHHHHcC
Q 015082 78 AEAVMFGAIDELFAKTSVKPKDI-G----ILIVNCSL-FN---------------------PTP-----SLSAMVINHYK 125 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~~I-d----~li~~s~~-~~---------------------~~p-----~~a~~v~~~lG 125 (413)
...|+..|++++|+++|++++++ + .+++++.. .+ ..+ ..+.+|...+|
T Consensus 82 ~~~l~~~aa~~Al~dAgl~~~~~~~~~~~Gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g 161 (424)
T PRK06333 82 FILFAMAAAKEALAQAGWDPDTLEDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAGHVSIRYG 161 (424)
T ss_pred HHHHHHHHHHHHHHhcCCCccccCCcccEEEEEecCcccHHHHHHHHHHHHhcCCcccChhHHhhhhhhHHHHHHHHHhC
Confidence 66889999999999999988776 3 45565431 10 011 23667888999
Q ss_pred CCCCcceEEecCccchhHHHHHHHHHHHHHcCCCCeEEEEEEccccCC-----------C-----------ccCCCccch
Q 015082 126 LRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENITLN-----------W-----------YFGNDRSKL 183 (413)
Q Consensus 126 l~~~~~~~~v~~~~C~~~~~al~~A~~~i~~g~~~~vLVv~~e~~s~~-----------~-----------~~~~d~~~~ 183 (413)
+. .+++.+. .+|++++.||..|..+|++|.++.+||+++|.+... + .++-|+..
T Consensus 162 l~--Gp~~~v~-~aCaSg~~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~~~~f~~~~~l~~~~~~~p~~~~~Pfd~~~- 237 (424)
T PRK06333 162 FK--GPLGAPV-TACAAGVQAIGDAARLIRSGEADVAVCGGTEAAIDRVSLAGFAAARALSTRFNDAPEQASRPFDRDR- 237 (424)
T ss_pred CC--CCCcccc-chhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHcccccccCCCCCCcCCCCCCCCC-
Confidence 95 6888899 799999999999999999999999999999973210 0 01111110
Q ss_pred hhhcccccCceEEEEecCCC
Q 015082 184 VSNCLFRMGGAAILLSNRFS 203 (413)
Q Consensus 184 ~~~~lfGDGAaA~ll~~~~~ 203 (413)
..++.||||+++||++.+.
T Consensus 238 -~G~~~gEGaa~lvLe~~~~ 256 (424)
T PRK06333 238 -DGFVMGEGAGILVIETLEH 256 (424)
T ss_pred -CCeEEecceEEEEEeeHHH
Confidence 2467899999999997543
No 68
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=99.30 E-value=9.6e-11 Score=118.77 Aligned_cols=121 Identities=14% Similarity=0.226 Sum_probs=85.9
Q ss_pred HHHHHHHHHHHHHHhCCCC---CCCcCeEEEEcc----------------CCCCCC---------ChHHHHHHHcCCCCC
Q 015082 78 AEAVMFGAIDELFAKTSVK---PKDIGILIVNCS----------------LFNPTP---------SLSAMVINHYKLRGN 129 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~---~~~Id~li~~s~----------------~~~~~p---------~~a~~v~~~lGl~~~ 129 (413)
...|+..|+++||+++|++ +++|+.++.++. +++..| ..+.+|+..+|+.
T Consensus 80 ~~~lal~Aa~eAl~dAgl~~~~~~riGvivG~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~-- 157 (410)
T PRK07103 80 SAQAALAAAREAWRDAALGPVDPDRIGLVVGGSNLQQREQALVHETYRDRPAFLRPSYGLSFMDTDLVGLCSEQFGIR-- 157 (410)
T ss_pred HHHHHHHHHHHHHHhcCcCCCCCCCEEEEEccCCcchHHHHHHHHHhccCccccChhhhhhhcchHHHHHHHHHhCCC--
Confidence 5679999999999999986 345554443332 111112 2466788999996
Q ss_pred cceEEecCccchhHHHHHHHHHHHHHcCCCCeEEEEEEccc-cC---------C-------------CccCCCccchhhh
Q 015082 130 IISYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENI-TL---------N-------------WYFGNDRSKLVSN 186 (413)
Q Consensus 130 ~~~~~v~~~~C~~~~~al~~A~~~i~~g~~~~vLVv~~e~~-s~---------~-------------~~~~~d~~~~~~~ 186 (413)
.+++.+. .+|++++.||..|.++|++|.++.+||++++.. +. . ..++-|+.. ..
T Consensus 158 G~~~tv~-~acas~~~Al~~A~~~I~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~rPfd~~~--dG 234 (410)
T PRK07103 158 GEGFTVG-GASASGQLAVIQAARLVQSGSVDACIAVGALMDLSYWECQALRSLGAMGSDRFADEPEAACRPFDQDR--DG 234 (410)
T ss_pred CCccccc-chhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHccccccCccCCCcccCcCCCCCCC--CC
Confidence 5778899 699999999999999999999999999998631 10 0 001111110 24
Q ss_pred cccccCceEEEEecCCC
Q 015082 187 CLFRMGGAAILLSNRFS 203 (413)
Q Consensus 187 ~lfGDGAaA~ll~~~~~ 203 (413)
.++||||+|+||++.+.
T Consensus 235 ~v~gEGaaalvLe~~~~ 251 (410)
T PRK07103 235 FIYGEACGAVVLESAES 251 (410)
T ss_pred eeEeeeEEEEEEccHHH
Confidence 78999999999997654
No 69
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=99.29 E-value=1.1e-11 Score=125.11 Aligned_cols=94 Identities=18% Similarity=0.222 Sum_probs=86.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCeEEEEcc-CCCCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHHc
Q 015082 78 AEAVMFGAIDELFAKTSVKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQV 156 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~-~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~~ 156 (413)
..||+.+|++++|+++|++++|||.|++++. +....+..+..++..+|+++++++++|+ .+|++++.++..|.++|++
T Consensus 26 ~~eLa~~A~~~AL~~agl~~~dID~vv~g~~~~~~~~~~~a~~va~~~Gl~~~~p~~~V~-~~CaSg~~Al~~A~~~I~s 104 (404)
T PRK06205 26 AEELAATVIRALVERTGIDPARIDDVIFGQGYPNGEAPAIGRVAALDAGLPVTVPGMQLD-RRCGSGLQAVITAAMQVQT 104 (404)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCceeehh-hhhhHHHHHHHHHHHHHHc
Confidence 5688999999999999999999999999975 5555677888999999998668999999 7999999999999999999
Q ss_pred CCCCeEEEEEEccccC
Q 015082 157 HPNSYALVISMENITL 172 (413)
Q Consensus 157 g~~~~vLVv~~e~~s~ 172 (413)
|.++.|||+++|++|.
T Consensus 105 G~~d~vLv~G~E~ms~ 120 (404)
T PRK06205 105 GAADVVIAGGAESMSN 120 (404)
T ss_pred CCCCEEEEeeehhhcc
Confidence 9999999999999885
No 70
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=99.28 E-value=1.5e-11 Score=123.69 Aligned_cols=94 Identities=17% Similarity=0.183 Sum_probs=83.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCeEEEEcc-CCCCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHHc
Q 015082 78 AEAVMFGAIDELFAKTSVKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQV 156 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~-~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~~ 156 (413)
..+|+.+|++++|+++|++++|||.||+++. +....+..+..++..+|++.++++++|+ ++|++++.|+..|.++|++
T Consensus 26 ~~eLa~~A~~~aL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~~~V~-~~CaSg~~Al~~A~~~I~s 104 (393)
T PRK08235 26 ATELGGIAIKEALERANVSAEDVEEVIMGTVLQGGQGQIPSRQAARAAGIPWEVQTETVN-KVCASGLRAVTLADQIIRA 104 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCCHHHHHHHHcCCCCCcceeehh-hhhhHHHHHHHHHHHHHHC
Confidence 4688899999999999999999999999975 4212445667789999997579999999 7999999999999999999
Q ss_pred CCCCeEEEEEEccccC
Q 015082 157 HPNSYALVISMENITL 172 (413)
Q Consensus 157 g~~~~vLVv~~e~~s~ 172 (413)
|.+++|||+++|++|.
T Consensus 105 G~~d~vLvvG~E~ms~ 120 (393)
T PRK08235 105 GDASVIVAGGMESMSN 120 (393)
T ss_pred CCCCEEEEEeeecccc
Confidence 9999999999999986
No 71
>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.28 E-value=3e-10 Score=115.00 Aligned_cols=190 Identities=12% Similarity=0.052 Sum_probs=117.0
Q ss_pred CceEEEEeeeeecCCCCccccHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCceeecCCcccCCCC--CccHHHHHHHH
Q 015082 1 MIFGSISNFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDSTYLPEAVLNIPP--NPSMKEARKEA 78 (413)
Q Consensus 1 ~~~v~I~~ig~~lP~~~~~v~~~el~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~--~~~ma~~~~~~ 78 (413)
|-.|.|.|+|...|- -.+.+++.+.+..- . +. ++.+.+ +...+...+.......+.... ...........
T Consensus 1 m~~v~ItG~g~vsp~---G~~~~~~~~~L~~G-~-s~--i~~~~~-~~~~~~~~~~~g~i~~f~~~~~~~~~~~~~~~~~ 72 (406)
T PRK08439 1 MKRVVVTGIGMINSL---GLNKESSFKAICNG-E-CG--IKKITL-FDASDFPVQIAGEITDFDPTEVMDPKEVKKADRF 72 (406)
T ss_pred CCCEEEEeeEEECCC---cCCHHHHHHHHHcC-C-Cc--eEeCCC-ccccCCCCceeEEcCCcChhhcCCHHHHhhcCHH
Confidence 557999999999999 36888888877531 0 00 000000 011111111110000000000 00011112235
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCe----EEEEccC-C-------------------------CCCC-ChHHHHHHHcCCC
Q 015082 79 EAVMFGAIDELFAKTSVKPKDIGI----LIVNCSL-F-------------------------NPTP-SLSAMVINHYKLR 127 (413)
Q Consensus 79 ~~la~~Aa~~aL~~ag~~~~~Id~----li~~s~~-~-------------------------~~~p-~~a~~v~~~lGl~ 127 (413)
..|+..|+++||+++|+++++++. +++++.. . ...+ ..+..|...+|+.
T Consensus 73 ~~l~~~Aa~~AL~dAGl~~~~~~~~r~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~ 152 (406)
T PRK08439 73 IQLGLKAAREAMKDAGFLPEELDAERFGVSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGFISIEHGLK 152 (406)
T ss_pred HHHHHHHHHHHHHHcCCCcccCCCCCEEEEEecCCccHHHHHHHHHHHHhcCccccCchhcccccccHHHHHHHHHhCCC
Confidence 789999999999999999877763 4444321 0 0112 4677899999997
Q ss_pred CCcceEEecCccchhHHHHHHHHHHHHHcCCCCeEEEEEEccc-cC--------------C------CccCCCccchhhh
Q 015082 128 GNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENI-TL--------------N------WYFGNDRSKLVSN 186 (413)
Q Consensus 128 ~~~~~~~v~~~~C~~~~~al~~A~~~i~~g~~~~vLVv~~e~~-s~--------------~------~~~~~d~~~~~~~ 186 (413)
.+.+.+. .+|++++.||..|.++|++|.++.+||+++|.. +. . ..++-|... ..
T Consensus 153 --Gp~~~~~-~acas~~~Al~~A~~~i~~G~~d~~lv~g~d~~l~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~~--~G 227 (406)
T PRK08439 153 --GPNLSSV-TACAAGTHAIIEAVKTIMLGGADKMLVVGAESAICPVGIGGFAAMKALSTRNDDPKKASRPFDKDR--DG 227 (406)
T ss_pred --CCccccc-cHhHHHHHHHHHHHHHHHcCCCCEEEEecchhccCHHHHHHHHHhCccccCCCCCccCcCCccCCC--Cc
Confidence 5778888 699999999999999999999999999999962 11 0 011111111 24
Q ss_pred cccccCceEEEEecCCC
Q 015082 187 CLFRMGGAAILLSNRFS 203 (413)
Q Consensus 187 ~lfGDGAaA~ll~~~~~ 203 (413)
+++|+||+++||++.+.
T Consensus 228 ~v~gEGa~~lvLe~~~~ 244 (406)
T PRK08439 228 FVMGEGAGALVLEEYES 244 (406)
T ss_pred EEeeCceEEEEEccHHH
Confidence 78999999999997543
No 72
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=99.28 E-value=2e-11 Score=122.72 Aligned_cols=94 Identities=11% Similarity=0.225 Sum_probs=83.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCeEEEEcc-CCCC-CCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHH
Q 015082 78 AEAVMFGAIDELFAKTSVKPKDIGILIVNCS-LFNP-TPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQ 155 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~-~~~~-~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~ 155 (413)
+.||+.+|++++|+++|+++++||.||+++. +... .+..+...+..+|++.++++++|+ ++|+|++.|+.+|.++|+
T Consensus 28 ~~dLa~~A~~~al~~agi~p~~ID~vi~G~~~~~~~~~~~~~r~a~~~~Gl~~~~pa~~Vn-~aCaSg~~Ai~~A~~~I~ 106 (402)
T PRK08242 28 PVRLAAGLLEALRDRNGLDTAAVDDVVLGCVTPVGDQGADIARTAVLAAGLPETVPGVQIN-RFCASGLEAVNLAAAKVR 106 (402)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccccccHHHHHHHHcCCCCCCCeEEEc-chhhhHHHHHHHHHHHHH
Confidence 5789999999999999999999999999975 4332 345677777889997679999999 799999999999999999
Q ss_pred cCCCCeEEEEEEccccC
Q 015082 156 VHPNSYALVISMENITL 172 (413)
Q Consensus 156 ~g~~~~vLVv~~e~~s~ 172 (413)
+|..+.+||+++|++|+
T Consensus 107 sG~~d~vLv~G~E~mS~ 123 (402)
T PRK08242 107 SGWDDLVIAGGVESMSR 123 (402)
T ss_pred cCCCCEEEEEEEEccCC
Confidence 99999999999999986
No 73
>PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B ....
Probab=99.25 E-value=2.9e-11 Score=115.28 Aligned_cols=94 Identities=16% Similarity=0.245 Sum_probs=83.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCeEEEEcc-CCCCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHHc
Q 015082 78 AEAVMFGAIDELFAKTSVKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQV 156 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~-~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~~ 156 (413)
+.||+.+|++++|+++++++++||.|++++. +....+..+..+...+|++..++++.|+ +.|++++.|+..|...|++
T Consensus 26 ~~~L~~~a~~~al~~~~i~~~~Id~v~~G~~~~~~~g~~~ar~~~l~aGl~~~vp~~~V~-~~CaSG~~Av~~a~~~I~s 104 (264)
T PF00108_consen 26 PEDLAAEAVKAALERAGIDPEDIDAVIVGNVLQEGEGQNIARQAALAAGLPESVPATTVN-RACASGLQAVHLAAMAIAS 104 (264)
T ss_dssp HHHHHHHHHHHHHHHHTSHGGGEEEEEEE-SSSCTTTCHHHHHHHHHTTS-TTSEEEEEE--GGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhcccchhhhhhcCcccccccccchhhhhhhhhhcccccccceeeeh-hhhhHHHHHHHHhhhhhcC
Confidence 6799999999999999999999999999975 4444667889999999998889999999 7999999999999999999
Q ss_pred CCCCeEEEEEEccccC
Q 015082 157 HPNSYALVISMENITL 172 (413)
Q Consensus 157 g~~~~vLVv~~e~~s~ 172 (413)
|..+.+|++++|++|.
T Consensus 105 G~~dvvlagGvE~mS~ 120 (264)
T PF00108_consen 105 GEADVVLAGGVESMSR 120 (264)
T ss_dssp TS-SEEEEEEEEETTT
T ss_pred CCccEEEEeccccccc
Confidence 9999999999999997
No 74
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=99.23 E-value=4.5e-11 Score=120.41 Aligned_cols=94 Identities=15% Similarity=0.243 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHHHHhC-CCCCCCcCeEEEEcc-CCCCCCC-hHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHH
Q 015082 78 AEAVMFGAIDELFAKT-SVKPKDIGILIVNCS-LFNPTPS-LSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLL 154 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~a-g~~~~~Id~li~~s~-~~~~~p~-~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i 154 (413)
..||+.+|++++|+++ |++++|||.||++++ ++...+. .+..+...+|++..+++++|+ ++|++++.|+..|..+|
T Consensus 31 ~~eLa~~A~~~AL~~a~gl~~~dID~vi~g~~~~~~~~~~~~ar~~~~~~Gl~~~~p~~~V~-~aCaSg~~Al~~A~~~I 109 (399)
T PRK09052 31 PDDLLAHVLRSAVAQVPGLDPKLIEDAIVGCAMPEAEQGLNVARIGALLAGLPNSVGGVTVN-RFCASGLQAVAMAADRI 109 (399)
T ss_pred HHHHHHHHHHHHHHhccCcCHHHCCEEEEEecCCCCCCCchHHHHHHHHcCCCCCCceeeec-chhhHHHHHHHHHHHHH
Confidence 5789999999999997 999999999999964 5544443 444456667998448999999 79999999999999999
Q ss_pred HcCCCCeEEEEEEccccC
Q 015082 155 QVHPNSYALVISMENITL 172 (413)
Q Consensus 155 ~~g~~~~vLVv~~e~~s~ 172 (413)
++|..++|||+++|++|.
T Consensus 110 ~sG~~d~vLv~G~E~mS~ 127 (399)
T PRK09052 110 RVGEADVMIAAGVESMSM 127 (399)
T ss_pred HCCCCCEEEEEEEecccc
Confidence 999999999999999886
No 75
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=99.23 E-value=5.3e-11 Score=119.72 Aligned_cols=93 Identities=15% Similarity=0.226 Sum_probs=81.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCeEEEEcc-CCCCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHHc
Q 015082 78 AEAVMFGAIDELFAKTSVKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQV 156 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~-~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~~ 156 (413)
..+|+.+|++++|+++|++++|||.||++++ +....+..+..++..+|++ ..++++++ ++|++++.+|..|..+|++
T Consensus 21 ~~eLa~~A~~~AL~dAgi~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~-~~~~~~v~-~~casg~~al~~A~~~I~s 98 (385)
T PRK12578 21 VQELAWESIKEALNDAGVSQTDIELVVVGSTAYRGIELYPAPIVAEYSGLT-GKVPLRVE-AMCATGLAASLTAYTAVAS 98 (385)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccCChHHHHHHHhCCC-CCCeeEEe-ccCHHHHHHHHHHHHHHHC
Confidence 4688899999999999999999999999864 3222234578899999998 47789999 7999999999999999999
Q ss_pred CCCCeEEEEEEccccC
Q 015082 157 HPNSYALVISMENITL 172 (413)
Q Consensus 157 g~~~~vLVv~~e~~s~ 172 (413)
|.+++|||+++|++|.
T Consensus 99 G~~~~vLvvg~e~~s~ 114 (385)
T PRK12578 99 GLVDMAIAVGVDKMTE 114 (385)
T ss_pred CCCCEEEEEEEeeccc
Confidence 9999999999998764
No 76
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.22 E-value=9.9e-10 Score=111.10 Aligned_cols=191 Identities=10% Similarity=0.026 Sum_probs=115.2
Q ss_pred CceEEEEeeeeecCCCCccccHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCceeecCCcccCCCCC--ccHHHHHHHH
Q 015082 1 MIFGSISNFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDSTYLPEAVLNIPPN--PSMKEARKEA 78 (413)
Q Consensus 1 ~~~v~I~~ig~~lP~~~~~v~~~el~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~--~~ma~~~~~~ 78 (413)
|-.|.|.|+|...|- -.+.+++.+.+..-. +. ++.+.+.....++..+....-.....+.. ..........
T Consensus 1 m~~VvITG~g~vtp~---G~~~~~~~~~L~~g~--s~--i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~r~~~~~ 73 (405)
T PRK09116 1 MRRVVVTGMGGVTAL---GEDWQTIAARLKAGR--NA--VRRMPEWDRYDGLNTRLAAPIDDFELPAHYTRKKIRSMGRV 73 (405)
T ss_pred CCCEEEEeeEEECCC---CCCHHHHHHHHHcCC--CC--EEeCCchhhccCCCCceEEEecCcChhHhcCHHHHhhCCHH
Confidence 556899999999998 378999998775310 00 00000000011222222111000000000 0001111235
Q ss_pred HHHHHHHHHHHHHhCCCCC-CCcC----eEEEEcc-CC-----------------C--------CCCC-hHHHHHHHcCC
Q 015082 79 EAVMFGAIDELFAKTSVKP-KDIG----ILIVNCS-LF-----------------N--------PTPS-LSAMVINHYKL 126 (413)
Q Consensus 79 ~~la~~Aa~~aL~~ag~~~-~~Id----~li~~s~-~~-----------------~--------~~p~-~a~~v~~~lGl 126 (413)
..|+..|+++||+++|+.. ..++ .|+++++ .. . .+|+ .+.+|+..+|+
T Consensus 74 ~~~al~aa~~Al~dAGl~~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~ 153 (405)
T PRK09116 74 SLMATRASELALEDAGLLGDPILTDGRMGIAYGSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHTTAVNVGLFFGL 153 (405)
T ss_pred HHHHHHHHHHHHHHcCCCCccccCCCcEEEEEeecccchHHHHHHHHHHhhcCccccChhhhhhhcccHHHHHHHHHhCC
Confidence 6789999999999999842 2121 4555542 10 0 1222 57788899999
Q ss_pred CCCcceEEecCccchhHHHHHHHHHHHHHcCCCCeEEEEEEccccCC--------------------CccCCCccchhhh
Q 015082 127 RGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENITLN--------------------WYFGNDRSKLVSN 186 (413)
Q Consensus 127 ~~~~~~~~v~~~~C~~~~~al~~A~~~i~~g~~~~vLVv~~e~~s~~--------------------~~~~~d~~~~~~~ 186 (413)
. -+.+.+. .+|++++.||..|.++|++|.++.+||.++|..+.. ..++-|+.. ..
T Consensus 154 ~--Gp~~ti~-~acas~~~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~f~~l~~~~~~~~~~~~~~rPfd~~~--~G 228 (405)
T PRK09116 154 K--GRVIPTS-SACTSGSQGIGYAYEAIKYGYQTVMLAGGAEELCPTEAAVFDTLFATSTRNDAPELTPRPFDANR--DG 228 (405)
T ss_pred C--CCccccc-chhhhHHHHHHHHHHHHHcCCCCEEEEecchhcChHHHHHHHHhhhhccCCCCCCCCCCCCcCCC--CC
Confidence 6 5888899 699999999999999999999999999999864320 001112111 25
Q ss_pred cccccCceEEEEecCCC
Q 015082 187 CLFRMGGAAILLSNRFS 203 (413)
Q Consensus 187 ~lfGDGAaA~ll~~~~~ 203 (413)
++.|+||+++||++.+.
T Consensus 229 ~v~gEGa~~~vLe~~~~ 245 (405)
T PRK09116 229 LVIGEGAGTLVLEELEH 245 (405)
T ss_pred EeeeccEEEEEEccHHH
Confidence 78999999999997543
No 77
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.21 E-value=1.7e-09 Score=109.73 Aligned_cols=188 Identities=8% Similarity=-0.010 Sum_probs=114.5
Q ss_pred eEEEEeeeeecCCCCccccHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCceeecCCcccCCCC--CccHHHHHHHHHH
Q 015082 3 FGSISNFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDSTYLPEAVLNIPP--NPSMKEARKEAEA 80 (413)
Q Consensus 3 ~v~I~~ig~~lP~~~~~v~~~el~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~--~~~ma~~~~~~~~ 80 (413)
.|.|.|+|...|. -.+.+++.+.+..-. +. ++.+++ ++..++..+....-.++..+. ...-+........
T Consensus 5 ~VvItG~g~~~p~---g~~~~~~w~~L~~g~--s~--i~~~~~-~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~d~~~~ 76 (414)
T PRK08722 5 RVVVTGMGMLSPV---GNTVESSWKALLAGQ--SG--IVNIEH-FDTTNFSTRFAGLVKDFNCEEYMSKKDARKMDLFIQ 76 (414)
T ss_pred CEEEEeeEEECCC---CCCHHHHHHHHHhCC--Ce--eeecCc-cccccCCCceeEEcCCCChhHcCCHHHHhhcCHHHH
Confidence 5899999999999 378899988764210 00 000000 011111111110000000000 0000111122557
Q ss_pred HHHHHHHHHHHhCCCCCCCcC----eEEEEcc-CCC-------------------------CCC-ChHHHHHHHcCCCCC
Q 015082 81 VMFGAIDELFAKTSVKPKDIG----ILIVNCS-LFN-------------------------PTP-SLSAMVINHYKLRGN 129 (413)
Q Consensus 81 la~~Aa~~aL~~ag~~~~~Id----~li~~s~-~~~-------------------------~~p-~~a~~v~~~lGl~~~ 129 (413)
++..|+.+||+++|+++++.+ .|+++++ .+. ..+ ..+.++...+|+.
T Consensus 77 ~~l~a~~~Al~dAGl~~~~~~~~r~Gv~vGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~gl~-- 154 (414)
T PRK08722 77 YGIAAGIQALDDSGLEVTEENAHRIGVAIGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVNMIAGNLSIMRGLR-- 154 (414)
T ss_pred HHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCCcchhHHHHHHHHHhcCcccCCchhcccccccHHHHHHHHHhCCC--
Confidence 889999999999999764433 3555542 110 111 2578888999996
Q ss_pred cceEEecCccchhHHHHHHHHHHHHHcCCCCeEEEEEEccccCCC----------c-----------cCCCccchhhhcc
Q 015082 130 IISYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENITLNW----------Y-----------FGNDRSKLVSNCL 188 (413)
Q Consensus 130 ~~~~~v~~~~C~~~~~al~~A~~~i~~g~~~~vLVv~~e~~s~~~----------~-----------~~~d~~~~~~~~l 188 (413)
-+.+.+. .+|++++.||..|.++|++|.++.+||+++|.....+ . ++-|+.. ..++
T Consensus 155 Gp~~ti~-~aCas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~~--~G~~ 231 (414)
T PRK08722 155 GPNIAIS-TACTTGLHNIGHAARMIAYGDADAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASRPWDKDR--DGFV 231 (414)
T ss_pred CCccccc-cccHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHcCCcccCCCCCccccCcCcCCC--CceE
Confidence 6888999 7999999999999999999999999999999743200 0 1112111 2478
Q ss_pred cccCceEEEEecCCC
Q 015082 189 FRMGGAAILLSNRFS 203 (413)
Q Consensus 189 fGDGAaA~ll~~~~~ 203 (413)
.||||+++||++.+.
T Consensus 232 ~gEGaaalvLe~~~~ 246 (414)
T PRK08722 232 LGDGAGMMVLEEYEH 246 (414)
T ss_pred eeceEEEEEEccHHH
Confidence 999999999997654
No 78
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=99.21 E-value=6.3e-11 Score=120.53 Aligned_cols=94 Identities=15% Similarity=0.290 Sum_probs=83.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCeEEEEcc-CCCCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHHc
Q 015082 78 AEAVMFGAIDELFAKTSVKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQV 156 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~-~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~~ 156 (413)
..+|+.+|++++|+++|++++|||.||+++. +....+..+..++..+|++.++++++++ ++|++++.++.+|.++|++
T Consensus 27 ~~~L~~~A~~~Al~dAgl~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~p~~~v~-~~CaSg~~al~~A~~~I~s 105 (426)
T PRK08170 27 ASDLAVAAGRALLNRQPFAPDDLDEVILGCAMPSPDEANIARVVALRLGCGEKVPAWTVQ-RNCASGMQALDSAAANIAL 105 (426)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcChHHHHHHHHhCcCCCceeeecc-chhhHHHHHHHHHHHHHHC
Confidence 5788999999999999999999999999864 3222456788999999997568999999 7999999999999999999
Q ss_pred CCCCeEEEEEEccccC
Q 015082 157 HPNSYALVISMENITL 172 (413)
Q Consensus 157 g~~~~vLVv~~e~~s~ 172 (413)
|.+++|||+++|++|.
T Consensus 106 G~~d~vLv~G~E~ms~ 121 (426)
T PRK08170 106 GRADLVLAGGVEAMSH 121 (426)
T ss_pred CCCCEEEEEEEecccC
Confidence 9999999999998875
No 79
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.20 E-value=1.3e-09 Score=109.29 Aligned_cols=298 Identities=13% Similarity=0.111 Sum_probs=168.5
Q ss_pred CceEEEEeeeeecCCCCccccHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCce-eecCCcccC----CCCCccHHHHH
Q 015082 1 MIFGSISNFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDS-TYLPEAVLN----IPPNPSMKEAR 75 (413)
Q Consensus 1 ~~~v~I~~ig~~lP~~~~~v~~~el~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R-~~~~~~~~~----~~~~~~ma~~~ 75 (413)
|=.|.|.|+|...|- -. .+++.+.+.. .++||..- .|....... .....+
T Consensus 1 ~~rVvITG~G~vsp~--G~--~~~~~~~l~~----------------G~sgi~~~~~~~~~~~~~~~~~~~~~~~----- 55 (381)
T PRK05952 1 MMKVVVTGIGLVSAL--GD--LEQSWQRLLQ----------------GKSGIKLHQPFPELPPLPLGLIGNQPSS----- 55 (381)
T ss_pred CCeEEEEeeEEECcc--cC--HHHHHHHHHc----------------CCCCeEeCCcccccccccceeecccccc-----
Confidence 557999999999999 54 8888876642 12333311 010000000 000011
Q ss_pred HHHHHHHHHHHHHHHHhCCCCC--CCcCeEEEEcc-CC--------------------C--------CCC-ChHHHHHHH
Q 015082 76 KEAEAVMFGAIDELFAKTSVKP--KDIGILIVNCS-LF--------------------N--------PTP-SLSAMVINH 123 (413)
Q Consensus 76 ~~~~~la~~Aa~~aL~~ag~~~--~~Id~li~~s~-~~--------------------~--------~~p-~~a~~v~~~ 123 (413)
...++..|+++||+++|+++ +++. |+++++ .. . .+| ..+..++..
T Consensus 56 --~~~~~~~a~~~Al~dagl~~~~~~~G-v~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~ 132 (381)
T PRK05952 56 --LEDLTKTVVTAALKDAGLTPPLTDCG-VVIGSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLDTLPHQAAIAAARQ 132 (381)
T ss_pred --ccHHHHHHHHHHHHhcCCCCCCCCEE-EEEeeCcchHHHHHHHHHHHhhcCCccccccCHHHHHHhcccHHHHHHHHH
Confidence 12355789999999999974 4443 555542 10 0 112 246778889
Q ss_pred cCCCCCcceEEecCccchhHHHHHHHHHHHHHcCCCCeEEEEEEcc-ccCC----C----------ccCCCccchhhhcc
Q 015082 124 YKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMEN-ITLN----W----------YFGNDRSKLVSNCL 188 (413)
Q Consensus 124 lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~~g~~~~vLVv~~e~-~s~~----~----------~~~~d~~~~~~~~l 188 (413)
+|+. -+.+.+. .+|++++.||..|.++|++|.++.+||.++|. .+.. | .++-|+.. ..++
T Consensus 133 ~~~~--Gp~~ti~-~aCasg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~rPfd~~r--~G~v 207 (381)
T PRK05952 133 IGTQ--GPVLAPM-AACATGLWAIAQGVELIQTGQCQRVIAGAVEAPITPLTLAGFQQMGALAKTGAYPFDRQR--EGLV 207 (381)
T ss_pred hCCC--Ccccccc-chhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCcCCCCCCCCCCCC--CCcc
Confidence 9996 5888999 69999999999999999999999999999995 2210 0 11112211 2478
Q ss_pred cccCceEEEEecCCCCcccccceEee-eeeeecCCCCccccccccccCCCCceeeEecchhhHHhHHhhhhhhhhcCCCc
Q 015082 189 FRMGGAAILLSNRFSDRRRSKYRLVH-TVRTHKGADDNCFACVTQEEDSEGKVGVTLSKNLMAVAGDALKTNITTLGPLV 267 (413)
Q Consensus 189 fGDGAaA~ll~~~~~~~~~~~~~i~~-~~~~~~~td~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 267 (413)
+||||+++||++.+....+ +..+.. +......+|+.+. .. |...+..
T Consensus 208 ~gEGaa~lvLe~~~~A~~r-g~~i~a~I~g~~~~~d~~~~---~~----------------~~~~~~~------------ 255 (381)
T PRK05952 208 LGEGGAILVLESAELAQKR-GAKIYGQILGFGLTCDAYHM---SA----------------PEPDGKS------------ 255 (381)
T ss_pred ccccEEEEEEeeHHHHHhC-CCceEEEEEEEEecCCCCCC---CC----------------CCCCHHH------------
Confidence 9999999999976432110 111111 1111222333211 00 0000000
Q ss_pred cchhHHHHHHHHHHHHHhhhhccCCCccchhccccEEEecCCChHHHH-----HHHHhcCCCcccchhhHHHHhhhcCCC
Q 015082 268 LPMSEQLLFFATLVGKKLFKMKIKPYIPDFKLAFEHFCIHAGGRAVLD-----ELEKNLQLSDWHMEPSRMTLYRFGNTS 342 (413)
Q Consensus 268 ~~~~~~~~~~~~~~~~~v~~~al~~~~~~~~~did~~i~hq~~~~~~~-----~i~~~lgi~~e~~~~s~~~l~~~Gn~~ 342 (413)
..+.++.++++ .+..++|||++-.|-.+-...+ .+.+.++- ++. ...+-..+||+.
T Consensus 256 --------------~~~ai~~Al~~-agi~p~dId~i~~hgtgt~~~D~~E~~al~~~fg~---~~~-v~s~K~~~GH~~ 316 (381)
T PRK05952 256 --------------AIAAIQQCLAR-SGLTPEDIDYIHAHGTATRLNDQREANLIQALFPH---RVA-VSSTKGATGHTL 316 (381)
T ss_pred --------------HHHHHHHHHHH-hCCCHHHeeEEEccCCCCCCCcHHHHHHHHHHcCC---CCe-eecchhhhccCh
Confidence 01122222322 2233689999999987654433 34555551 221 023445799999
Q ss_pred cchHHHHHHH---HHHcCCCCC---------------------CCeEEEEeeccchhhhhhhhh
Q 015082 343 SSSLWYELAY---SEAKGRIKK---------------------GDRTWQIAFGSGFKCNSAVWK 382 (413)
Q Consensus 343 sasi~i~L~~---~~~~g~l~~---------------------Gd~vll~~~G~G~~~~a~llr 382 (413)
+|+-.+.+.. .++++.+.| =++++..+||.|-.-++++|+
T Consensus 317 ~AaG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~v~~~~~~~~~~~l~~s~gfGG~na~lvl~ 380 (381)
T PRK05952 317 GASGALGVAFSLLALRHQQLPPCVGLQEPEFDLNFVRQAQQSPLQNVLCLSFGFGGQNAAIALG 380 (381)
T ss_pred HHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcCCCcccCCCCEEEEeeecCCCeeEEEEEe
Confidence 9987766654 344555543 145677778877666666554
No 80
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=99.18 E-value=8.8e-11 Score=118.36 Aligned_cols=94 Identities=16% Similarity=0.191 Sum_probs=80.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCeEEEEcc-CCCCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHHc
Q 015082 78 AEAVMFGAIDELFAKTSVKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQV 156 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~-~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~~ 156 (413)
..||+.+|++++|+++|+++++||.||++++ ++......+......+|++.++++++|+ ++|++++.|+..|..+|++
T Consensus 31 ~~eL~~~a~~~aL~~Agi~~~dID~vi~G~~~~~~~~~~~~~~~~l~ag~~~~~p~~~V~-~aCaSG~~Av~~A~~~I~s 109 (397)
T PRK06954 31 APQLGAAAIAAAVERAGLKPEQIDEVVMGCVLPAGQGQAPARQAALGAGLPLSVGCTTVN-KMCGSGMRAAMFAHDMLVA 109 (397)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccchHHHHHHHHcCCCCCCccEeecc-ccchHHHHHHHHHHHHHHC
Confidence 5789999999999999999999999999964 4333334444555667887569999999 7999999999999999999
Q ss_pred CCCCeEEEEEEccccC
Q 015082 157 HPNSYALVISMENITL 172 (413)
Q Consensus 157 g~~~~vLVv~~e~~s~ 172 (413)
|.++.+||+++|++|.
T Consensus 110 G~~d~vLv~G~E~ms~ 125 (397)
T PRK06954 110 GSVDVIVAGGMESMTN 125 (397)
T ss_pred CCCCEEEEEeeeccCC
Confidence 9999999999999985
No 81
>PRK06059 lipid-transfer protein; Provisional
Probab=99.17 E-value=1e-10 Score=118.24 Aligned_cols=93 Identities=12% Similarity=0.044 Sum_probs=81.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCeEEEEcc-C-CCCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHH
Q 015082 78 AEAVMFGAIDELFAKTSVKPKDIGILIVNCS-L-FNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQ 155 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~-~-~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~ 155 (413)
..+|+.+|+++||+++|+++++||.||++++ + .+..+..+..++..||+. .+++++++ .+|++++.+|..|.++|+
T Consensus 23 ~~~La~~A~~~Al~dAgl~~~dId~vi~~~~~~~~~~~~~~a~~va~~lG~~-~~~~~~v~-~~Casg~~al~~A~~~I~ 100 (399)
T PRK06059 23 FVEYGVVAARAALADAGLDWRDVQLVVGADTIRNGYPGFVAGATFAQALGWN-GAPVSSSY-AACASGSQALQSARAQIL 100 (399)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCccCCccHHHHHHHHhCCC-CCceeccc-chhHHHHHHHHHHHHHHH
Confidence 3688899999999999999999999998753 3 333445678999999997 58899999 699999999999999999
Q ss_pred cCCCCeEEEEEEccccC
Q 015082 156 VHPNSYALVISMENITL 172 (413)
Q Consensus 156 ~g~~~~vLVv~~e~~s~ 172 (413)
+|.+++|||+++|++|.
T Consensus 101 sG~~~~vLvvg~e~~s~ 117 (399)
T PRK06059 101 AGLCDVALVVGADTTPK 117 (399)
T ss_pred CCCCCEEEEEEEcccCC
Confidence 99999999999998763
No 82
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=99.16 E-value=3.8e-09 Score=109.88 Aligned_cols=187 Identities=11% Similarity=0.071 Sum_probs=113.0
Q ss_pred eEEEEeeeeecCCCCccccHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCceeecCCc-ccCCC--CCccHHHHHHHHH
Q 015082 3 FGSISNFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDSTYLPEA-VLNIP--PNPSMKEARKEAE 79 (413)
Q Consensus 3 ~v~I~~ig~~lP~~~~~v~~~el~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~-~~~~~--~~~~ma~~~~~~~ 79 (413)
.|.|.|+|...|- -.+.+++.+.+..-. +. ++.+.++ ....+..|. .... .+..+ .............
T Consensus 130 rVvITG~G~vtp~---G~~~~~~w~~L~~G~--s~--i~~~~~f-~~~~~~~~~-ag~i~~f~~~~~l~~k~~r~md~~~ 200 (540)
T PLN02787 130 RVVVTGMGVVSPL---GHDPDVFYNNLLEGV--SG--ISEIERF-DCSQFPTRI-AGEIKSFSTDGWVAPKLSKRMDKFM 200 (540)
T ss_pred CEEEEeeEEECCC---CCCHHHHHHHHHcCC--Cc--ccccCcc-chhhCCccc-cccccccChhhcCCHHHHHhCCHHH
Confidence 4899999999999 378899988775310 00 0000000 011111111 0000 00000 0011111112255
Q ss_pred HHHHHHHHHHHHhCCCCCCC---cC----eEEEEccC-CC------------------------CCC-ChHHHHHHHcCC
Q 015082 80 AVMFGAIDELFAKTSVKPKD---IG----ILIVNCSL-FN------------------------PTP-SLSAMVINHYKL 126 (413)
Q Consensus 80 ~la~~Aa~~aL~~ag~~~~~---Id----~li~~s~~-~~------------------------~~p-~~a~~v~~~lGl 126 (413)
.++..|+++||+++|++++. ++ .|++++.. .. ..+ ..+..|+..+|+
T Consensus 201 ~~al~Aa~eAL~dAGl~~~~~~~~~~~r~GV~vGt~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~~gl 280 (540)
T PLN02787 201 LYLLTAGKKALADGGITEDVMKELDKTKCGVLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNMGSAMLAMDLGW 280 (540)
T ss_pred HHHHHHHHHHHHHcCCCcccccccCCCceEEEEEeccchHHHHHHHHHHHhhccccCCcchhhhhcccHHHHHHHHHhCC
Confidence 78899999999999997642 21 46666431 10 011 135678889999
Q ss_pred CCCcceEEecCccchhHHHHHHHHHHHHHcCCCCeEEEEEEccc-cC--------------C------CccCCCccchhh
Q 015082 127 RGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENI-TL--------------N------WYFGNDRSKLVS 185 (413)
Q Consensus 127 ~~~~~~~~v~~~~C~~~~~al~~A~~~i~~g~~~~vLVv~~e~~-s~--------------~------~~~~~d~~~~~~ 185 (413)
. .+.+.+. .+|++++.||..|.++|++|.++.+||.++|.. +. . ..++-|+.. .
T Consensus 281 ~--Gp~~tis-tACASs~~Ai~~A~~~Ir~G~aD~aLvGG~d~~l~p~~~~~f~~~~aLS~~~~~p~~~~rPFD~~r--d 355 (540)
T PLN02787 281 M--GPNYSIS-TACATSNFCILNAANHIIRGEADVMLCGGSDAAIIPIGLGGFVACRALSQRNDDPTKASRPWDMNR--D 355 (540)
T ss_pred C--CCccccc-cccccHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHHHHHHhhccCCCcccccCCcccCC--C
Confidence 6 6888999 799999999999999999999999999999952 11 0 011112111 2
Q ss_pred hcccccCceEEEEecCCC
Q 015082 186 NCLFRMGGAAILLSNRFS 203 (413)
Q Consensus 186 ~~lfGDGAaA~ll~~~~~ 203 (413)
.+++|+||+++||++.+.
T Consensus 356 Gfv~GEGAa~lVLE~~e~ 373 (540)
T PLN02787 356 GFVMGEGAGVLLLEELEH 373 (540)
T ss_pred CcccccceEEEEEeeHHH
Confidence 578999999999997544
No 83
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=99.15 E-value=1.6e-10 Score=116.30 Aligned_cols=93 Identities=14% Similarity=0.104 Sum_probs=81.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCeEEEEcc-CCCCCCChHH-HHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHH
Q 015082 78 AEAVMFGAIDELFAKTSVKPKDIGILIVNCS-LFNPTPSLSA-MVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQ 155 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~-~~~~~p~~a~-~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~ 155 (413)
+.+|+.+|++++|+++++++++||.||+++. +++..+..+. .+++.+|+. ++++++|+ ++|++++.++.+|..+|+
T Consensus 23 ~~el~~~a~~~Al~~agl~p~dID~vi~g~~~~~~~g~~~~~~~~~~~lg~~-~~p~~~V~-~~Casg~~al~~A~~~I~ 100 (393)
T cd00826 23 AHEAGAKAIAAALEPAGVAAGAVEEACLGQVLGAGEGQNCAQQAAMHAGGLQ-EAPAIGMN-NLCGSGLRALALAMQLIA 100 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEEccCCcccCcHHHHHHHHcCCCC-CCcEEEec-chhHHHHHHHHHHHHHHH
Confidence 5789999999999999999999999999975 4443455555 367788887 69999999 799999999999999999
Q ss_pred cCCCCeEEEEEEccccC
Q 015082 156 VHPNSYALVISMENITL 172 (413)
Q Consensus 156 ~g~~~~vLVv~~e~~s~ 172 (413)
+|.++.+||+++|++|.
T Consensus 101 sG~~~~vlv~g~e~~s~ 117 (393)
T cd00826 101 GGDANCILAGGFEKMET 117 (393)
T ss_pred CCCCCEEEEEeeecccc
Confidence 99999999999999875
No 84
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=99.14 E-value=7.3e-09 Score=104.47 Aligned_cols=207 Identities=13% Similarity=0.027 Sum_probs=124.9
Q ss_pred ChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHHcCCCCeEEEEEEccccCC--------------CccCCCc
Q 015082 115 SLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENITLN--------------WYFGNDR 180 (413)
Q Consensus 115 ~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~~g~~~~vLVv~~e~~s~~--------------~~~~~d~ 180 (413)
..+..|+..+|+. .+++.+. .+|++++.||..|.++|++|.++.|||+++|..+.. ...+-|.
T Consensus 138 ~~a~~ia~~lgl~--Gp~~~i~-~acas~~~Al~~A~~~I~~G~~d~vlvgg~d~~~~~~~~~~~~~~~l~~~~~~Pfd~ 214 (392)
T PRK09185 138 SLADFLRAYLGLS--GPAYTIS-TACSSSAKVFASARRLLEAGLCDAAIVGGVDSLCRLTLNGFNSLESLSPQPCRPFSA 214 (392)
T ss_pred HHHHHHHHHhCCC--CCccccc-ChhHHHHHHHHHHHHHHHcCCCCEEEEeeccccChHHHHHHHhccccCCCccCCCcC
Confidence 4678899999996 4888999 699999999999999999999999999999864321 0111121
Q ss_pred cchhhhcccccCceEEEEecCCCCcccccceEeeeeeeecCCCCccccccccccCCCCceeeEecchhhHHhHHhhhhhh
Q 015082 181 SKLVSNCLFRMGGAAILLSNRFSDRRRSKYRLVHTVRTHKGADDNCFACVTQEEDSEGKVGVTLSKNLMAVAGDALKTNI 260 (413)
Q Consensus 181 ~~~~~~~lfGDGAaA~ll~~~~~~~~~~~~~i~~~~~~~~~td~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~ 260 (413)
.. ...++||||+++||++.... ..+|.++ -..+|+.. +..+ .|...+
T Consensus 215 ~~--~G~~~gEGaa~vVLe~~~~~----~~~I~g~---g~~~d~~~---~~~~--------------~~~~~~------- 261 (392)
T PRK09185 215 NR--DGINIGEAAAFFLLEREDDA----AVALLGV---GESSDAHH---MSAP--------------HPEGLG------- 261 (392)
T ss_pred CC--CccceeceEEEEEEEEcCCC----cEEEEEE---EEeCCCCC---CCCC--------------CCCHHH-------
Confidence 10 24689999999999987322 1233332 11223211 0000 000000
Q ss_pred hhcCCCccchhHHHHHHHHHHHHHhhhhccCCCccchhccccEEEecCCChHH-----HHHHHHhcCCCcccchhhHHHH
Q 015082 261 TTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDFKLAFEHFCIHAGGRAV-----LDELEKNLQLSDWHMEPSRMTL 335 (413)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~al~~~~~~~~~did~~i~hq~~~~~-----~~~i~~~lgi~~e~~~~s~~~l 335 (413)
. .+.++.+++. .+..++|||++.+|-.+-.. ...+.+.++-.. .+ ..+-
T Consensus 262 -------------~--------~~a~~~Al~~-Agl~~~dId~v~~hgtgt~~~D~~E~~al~~~f~~~~-pv---~s~K 315 (392)
T PRK09185 262 -------------A--------ILAMQQALAD-AGLAPADIGYINLHGTATPLNDAMESRAVAAVFGDGV-PC---SSTK 315 (392)
T ss_pred -------------H--------HHHHHHHHHH-cCCCHHHccEEEeCCCCCcCCCHHHHHHHHHHhCCCC-ce---eCCC
Confidence 0 0122222322 23347899999999876543 334555565221 12 2233
Q ss_pred hhhcCCCcchHHHHHHH---HHHcCCCCC------------------------CCeEEEEeeccchhhhhhhhhh
Q 015082 336 YRFGNTSSSSLWYELAY---SEAKGRIKK------------------------GDRTWQIAFGSGFKCNSAVWKA 383 (413)
Q Consensus 336 ~~~Gn~~sasi~i~L~~---~~~~g~l~~------------------------Gd~vll~~~G~G~~~~a~llr~ 383 (413)
..+||+.+|+=.+.|.. .+++|.+.+ -.+++.-+||.|-+-.+++|+.
T Consensus 316 ~~~Gh~~~AaG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~gfgG~n~~lvl~~ 390 (392)
T PRK09185 316 GLTGHTLGAAGAVEAAICWLALRHGLPPHGWNTGQPDPALPPLYLVENAQALAIRYVLSNSFAFGGNNCSLIFGR 390 (392)
T ss_pred cccccChhhcchHHHHHHHHHHhcCCCCCCCCCCCCCCCCCccccCCCCccCCCCEEEEeCccCCceeEEEEEEe
Confidence 45899999986666654 333443221 2457778888777777777653
No 85
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=99.14 E-value=2.9e-09 Score=107.55 Aligned_cols=187 Identities=11% Similarity=0.064 Sum_probs=112.6
Q ss_pred eEEEEeeeeecCCCCccccHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCceeecCCcccCCCC--CccHHHHHHHHHH
Q 015082 3 FGSISNFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDSTYLPEAVLNIPP--NPSMKEARKEAEA 80 (413)
Q Consensus 3 ~v~I~~ig~~lP~~~~~v~~~el~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~--~~~ma~~~~~~~~ 80 (413)
.|.|.|+|...|- -.+.+++.+.+..-. +. ++.+++ +...+...+.-..-..+.... ...-.....-...
T Consensus 2 ~VvItG~G~vsp~---G~~~~~~w~~L~~G~--s~--i~~~~~-~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~d~~~~ 73 (399)
T cd00832 2 RAVVTGIGVVAPN---GLGVEEYWKAVLDGR--SG--LGPITR-FDPSGYPARLAGEVPDFDAAEHLPGRLLPQTDRMTR 73 (399)
T ss_pred CEEEEeeEEeCCC---CCCHHHHHHHHHhCC--Ce--EeeCCc-cccccCCCceeEEeCCcChhhcCCHHHHhhCCHHHH
Confidence 4789999999998 367899988775310 00 000000 000111111000000000000 0000111123567
Q ss_pred HHHHHHHHHHHhCCCCCCCcC----eEEEEccC-CC-----------------CC--------C-ChHHHHHHHcCCCCC
Q 015082 81 VMFGAIDELFAKTSVKPKDIG----ILIVNCSL-FN-----------------PT--------P-SLSAMVINHYKLRGN 129 (413)
Q Consensus 81 la~~Aa~~aL~~ag~~~~~Id----~li~~s~~-~~-----------------~~--------p-~~a~~v~~~lGl~~~ 129 (413)
|+..|+.+||+++|+++++++ .|+++++. .+ .. + ..+.+|+..+|+.
T Consensus 74 ~~l~aa~eAl~dAGl~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~-- 151 (399)
T cd00832 74 LALAAADWALADAGVDPAALPPYDMGVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISIRHGMR-- 151 (399)
T ss_pred HHHHHHHHHHHHcCCCccccCCCceEEEEccCCccHHHHHHHHHHHHhcCccccChhhhhhhhhhHHHHHHHHHhCCC--
Confidence 899999999999999876543 35565431 10 00 1 2456888899996
Q ss_pred cceEEecCccchhHHHHHHHHHHHHHcCCCCeEEEEEEccccCC----------C----------ccCCCccchhhhccc
Q 015082 130 IISYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENITLN----------W----------YFGNDRSKLVSNCLF 189 (413)
Q Consensus 130 ~~~~~v~~~~C~~~~~al~~A~~~i~~g~~~~vLVv~~e~~s~~----------~----------~~~~d~~~~~~~~lf 189 (413)
.+++.+. .+|++++.||..|.++|++|. +.+||.++|..... . .++-|+.. ..++.
T Consensus 152 Gp~~ti~-~acaS~~~Al~~A~~~i~~G~-d~~i~gg~d~~~~p~~~~~~~~~~~ls~~~~p~~~~rPFd~~~--~G~~~ 227 (399)
T cd00832 152 GPSGVVV-AEQAGGLDALAQARRLVRRGT-PLVVSGGVDSALCPWGWVAQLSSGRLSTSDDPARAYLPFDAAA--AGYVP 227 (399)
T ss_pred CCccccc-chhHHHHHHHHHHHHHHHcCC-CeEEEEeeccccCHHHHHHHHhccccCCCCCCCCCcCCCcCCC--CCEee
Confidence 6888899 699999999999999999999 99999999863210 0 01111111 25789
Q ss_pred ccCceEEEEecCCC
Q 015082 190 RMGGAAILLSNRFS 203 (413)
Q Consensus 190 GDGAaA~ll~~~~~ 203 (413)
|+||+++||++.+.
T Consensus 228 gEGa~~lvLe~~~~ 241 (399)
T cd00832 228 GEGGAILVLEDAAA 241 (399)
T ss_pred eceEEEEEEeeHHH
Confidence 99999999998654
No 86
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=99.13 E-value=2.1e-10 Score=115.31 Aligned_cols=91 Identities=9% Similarity=0.051 Sum_probs=80.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCeEEEEccCCCC--CCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHH
Q 015082 78 AEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNP--TPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQ 155 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~--~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~ 155 (413)
..+|+.+|++++|+++|++++|||.+|+++.++.. .+..+..+++.||+. ..++++++ ++|+++..++..|.++|+
T Consensus 29 ~~~L~~~A~~~Al~dagl~~~dID~~i~~~~~~~~~~~~~~a~~l~~~lG~~-~~~~~~V~-~~gasG~~al~~A~~~I~ 106 (392)
T PRK06065 29 PQELAWEAASKALDEAGLELKDIDCVVIGSAPDAFDGVHMKGEYLSHGSGGI-RKPVSRVY-VGGATGVMTAIAGWYHVA 106 (392)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCcccccccHHHHHHHHcCCC-CCCeEEEe-cCchhHHHHHHHHHHHHh
Confidence 46888999999999999999999999998654322 455788899999997 48999999 699999999999999999
Q ss_pred cCCCCeEEEEEEccc
Q 015082 156 VHPNSYALVISMENI 170 (413)
Q Consensus 156 ~g~~~~vLVv~~e~~ 170 (413)
+|.+++||||++|++
T Consensus 107 sG~ad~vLVvg~e~~ 121 (392)
T PRK06065 107 SGLCQKVLAVAEEKM 121 (392)
T ss_pred CCCCCEEEEEEeecc
Confidence 999999999999985
No 87
>PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=99.13 E-value=7.7e-09 Score=104.56 Aligned_cols=189 Identities=13% Similarity=0.194 Sum_probs=116.3
Q ss_pred CceEEEEeeeeecCCCCccccHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCceeecCCcccCCCC--CccHHHHHHHH
Q 015082 1 MIFGSISNFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDSTYLPEAVLNIPP--NPSMKEARKEA 78 (413)
Q Consensus 1 ~~~v~I~~ig~~lP~~~~~v~~~el~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~--~~~ma~~~~~~ 78 (413)
|-.|.|.|+|...|- =.+.+++.+.+..-. +. ++...+ +...+...+.....+ ..... ...........
T Consensus 1 m~rVvITG~G~vsp~---G~~~~~~w~~l~~G~--sg--i~~~~~-~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~r~ 71 (406)
T PRK07967 1 MRRVVITGLGIVSSI---GNNQQEVLASLREGR--SG--ITFSPE-FAEMGMRSQVWGNVK-LDPTGLIDRKVMRFMGDA 71 (406)
T ss_pred CCcEEEEcceEECCC---CCCHHHHHHHHHcCC--Cc--eeECCc-ccccCCCCceEEEcC-CChhhcCCHHHhhcCCHH
Confidence 556899999999998 378899988774200 00 000000 112333333221111 00000 00011111235
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcC----eEEEEcc-CCC--------------------------CCC-ChHHHHHHHcCC
Q 015082 79 EAVMFGAIDELFAKTSVKPKDIG----ILIVNCS-LFN--------------------------PTP-SLSAMVINHYKL 126 (413)
Q Consensus 79 ~~la~~Aa~~aL~~ag~~~~~Id----~li~~s~-~~~--------------------------~~p-~~a~~v~~~lGl 126 (413)
..++..|+++||+++|+++++.+ .|+++++ ... ..+ ..+.+|+..+|+
T Consensus 72 ~~~a~~aa~~Al~dAGl~~~~~~~~rvGv~~gs~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~~l 151 (406)
T PRK07967 72 SAYAYLAMEQAIADAGLSEEQVSNPRTGLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACLATPFKI 151 (406)
T ss_pred HHHHHHHHHHHHHHcCCCCccCCCCCEEEEEecCCccHHHHHHHHHHHHhccCcccCCchhhcccccchHHHHHHHHHCC
Confidence 67889999999999999754433 2444432 110 011 257788999999
Q ss_pred CCCcceEEecCccchhHHHHHHHHHHHHHcCCCCeEEEEEEccccCC----C-----------------ccCCCccchhh
Q 015082 127 RGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENITLN----W-----------------YFGNDRSKLVS 185 (413)
Q Consensus 127 ~~~~~~~~v~~~~C~~~~~al~~A~~~i~~g~~~~vLVv~~e~~s~~----~-----------------~~~~d~~~~~~ 185 (413)
. -+.+.+. .+|++++.||..|.++|+.|.++.+||.++|..+.. | .++-|... .
T Consensus 152 ~--Gp~~tvs-~aCas~~~Ai~~A~~~ir~G~~d~~lvgg~d~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r--~ 226 (406)
T PRK07967 152 K--GVNYSIS-SACATSAHCIGNAVEQIQLGKQDIVFAGGGEELDWEMSCLFDAMGALSTKYNDTPEKASRAYDANR--D 226 (406)
T ss_pred C--CCccccc-cHhHHHHHHHHHHHHHHHcCCCCEEEEeeecccChHHHHHHHHhhhhccCCCCCCCcCCcCCcCCC--C
Confidence 6 5888899 799999999999999999999999999999864320 0 01111111 2
Q ss_pred hcccccCceEEEEecCCC
Q 015082 186 NCLFRMGGAAILLSNRFS 203 (413)
Q Consensus 186 ~~lfGDGAaA~ll~~~~~ 203 (413)
.++.|+||+++||++.+.
T Consensus 227 G~v~gEGaa~lvLe~~~~ 244 (406)
T PRK07967 227 GFVIAGGGGVVVVEELEH 244 (406)
T ss_pred ceeeeceEEEEEEeeHHH
Confidence 478999999999997544
No 88
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=99.11 E-value=5.3e-09 Score=106.94 Aligned_cols=121 Identities=14% Similarity=0.047 Sum_probs=88.2
Q ss_pred HHHHHHHHHHHHHHhCCCCC-----CCcCeEEEEccC-CC-------------------------CCC-ChHHHHHHHcC
Q 015082 78 AEAVMFGAIDELFAKTSVKP-----KDIGILIVNCSL-FN-------------------------PTP-SLSAMVINHYK 125 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~-----~~Id~li~~s~~-~~-------------------------~~p-~~a~~v~~~lG 125 (413)
...|+..|+.+||+++|+++ .+...|+++++. .. ..+ ..+.+|...+|
T Consensus 93 ~~~~~~~aa~~Al~dAg~~~~~~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~g 172 (437)
T PLN02836 93 FIGYALCAADEALSDARWLPSEDEAKERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPRILINMAAGHVSIRYG 172 (437)
T ss_pred HHHHHHHHHHHHHHHcCCCcccccCCcCEEEEEeeccCcHHHHHHHHHHHHhcCCCCCChhhhhhhcccHHHHHHHHHhC
Confidence 55789999999999999854 245567777531 10 011 24568889999
Q ss_pred CCCCcceEEecCccchhHHHHHHHHHHHHHcCCCCeEEEEEEccccC---------------C-------CccCCCccch
Q 015082 126 LRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENITL---------------N-------WYFGNDRSKL 183 (413)
Q Consensus 126 l~~~~~~~~v~~~~C~~~~~al~~A~~~i~~g~~~~vLVv~~e~~s~---------------~-------~~~~~d~~~~ 183 (413)
+. .+++.+. .+|++++.||..|..+|++|.++.+||.++|.... . ..++-|...
T Consensus 173 l~--Gp~~tv~-~acaSg~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~pfd~~~- 248 (437)
T PLN02836 173 FQ--GPNHAAV-TACATGAHSIGDAFRMIQFGDADVMVAGGTESSIDALSIAGFSRSRALSTKFNSCPTEASRPFDCDR- 248 (437)
T ss_pred CC--Cceecee-ChhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHHhhhhhcccCCCcccccCCcccCC-
Confidence 86 6889999 79999999999999999999999999999886311 0 011111111
Q ss_pred hhhcccccCceEEEEecCCC
Q 015082 184 VSNCLFRMGGAAILLSNRFS 203 (413)
Q Consensus 184 ~~~~lfGDGAaA~ll~~~~~ 203 (413)
..++.||||+|+||++.+.
T Consensus 249 -~G~~~gEGaaalVLe~~~~ 267 (437)
T PLN02836 249 -DGFVIGEGAGVLVLEELEH 267 (437)
T ss_pred -CCeeeecCEEEEEEeeHHH
Confidence 2478999999999997643
No 89
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=99.10 E-value=2.4e-09 Score=109.02 Aligned_cols=121 Identities=13% Similarity=0.075 Sum_probs=87.3
Q ss_pred HHHHHHHHHHHHHHhCCCC-CCCcCe----EEEEcc-CCC-----------------C--------CC-ChHHHHHHHcC
Q 015082 78 AEAVMFGAIDELFAKTSVK-PKDIGI----LIVNCS-LFN-----------------P--------TP-SLSAMVINHYK 125 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~-~~~Id~----li~~s~-~~~-----------------~--------~p-~~a~~v~~~lG 125 (413)
..+|+..|+++||+++|++ +++++. ++++++ ... . .+ ..+.+|...+|
T Consensus 77 ~~~l~~~aa~~Al~dAGl~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~ 156 (421)
T PTZ00050 77 ATHFAMAAAREALADAKLDILSEKDQERIGVNIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAIKHK 156 (421)
T ss_pred HHHHHHHHHHHHHHHcCCCcccccCcccEEEEEccCcccHHHHHHHHHHHHhcCcCcCCHHHHHhhhhhHHHHHHHHHhC
Confidence 5789999999999999998 666654 334332 110 0 01 24567788889
Q ss_pred CCCCcceEEecCccchhHHHHHHHHHHHHHcCCCCeEEEEEEccccCC---------------C-------ccCCCccch
Q 015082 126 LRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENITLN---------------W-------YFGNDRSKL 183 (413)
Q Consensus 126 l~~~~~~~~v~~~~C~~~~~al~~A~~~i~~g~~~~vLVv~~e~~s~~---------------~-------~~~~d~~~~ 183 (413)
+. -+++.+. .+|++++.||..|..+|++|.++.+||+++|..... + .++-|+..
T Consensus 157 l~--Gp~~ti~-~aCaSg~~Al~~A~~~I~~G~~d~~lvgG~e~~~~p~~~~~f~~~~~l~~~~~~~p~~~~~pfd~~~- 232 (421)
T PTZ00050 157 LK--GPSGSAV-TACATGAHCIGEAFRWIKYGEADIMICGGTEASITPVSFAGFSRMRALCTKYNDDPQRASRPFDKDR- 232 (421)
T ss_pred CC--Ccccccc-cHhHHHHHHHHHHHHHHHcCCCCEEEECcccccCCHHHHHHHHhhhccccCcCCCCCccCCCCcCCC-
Confidence 86 5888899 799999999999999999999999999999963210 0 01111111
Q ss_pred hhhcccccCceEEEEecCCC
Q 015082 184 VSNCLFRMGGAAILLSNRFS 203 (413)
Q Consensus 184 ~~~~lfGDGAaA~ll~~~~~ 203 (413)
..++.||||+|+||++.+.
T Consensus 233 -~G~~~gEGAaalvLe~~~~ 251 (421)
T PTZ00050 233 -AGFVMGEGAGILVLEELEH 251 (421)
T ss_pred -CCEeeccceEEEEEeeHHH
Confidence 2468899999999997654
No 90
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.10 E-value=8.4e-09 Score=104.75 Aligned_cols=186 Identities=9% Similarity=-0.010 Sum_probs=113.0
Q ss_pred ceEEEEeeeeecCCCCccccHHHHHHHHHhcC-CCChhhHHHHHHHHHHcCCCcee--ecCCcccCCCCCccH--HHHHH
Q 015082 2 IFGSISNFSCYKPEESRKCTKRIFMDQSRMTG-TFTEENLQFQKKILERSGLGDST--YLPEAVLNIPPNPSM--KEARK 76 (413)
Q Consensus 2 ~~v~I~~ig~~lP~~~~~v~~~el~~~~~~~~-~~~~~~~~~~~~i~~~~GI~~R~--~~~~~~~~~~~~~~m--a~~~~ 76 (413)
-.|.|.|+|...|- -.+.+++.+.+..-. .+.+-. ++.....++..+. +.. ..+. ...+. .....
T Consensus 12 ~~VvItGig~~sp~---g~~~~~~w~~L~~G~s~i~~~~----~~~~~~~~~~~~~~g~i~-~~~d--~~~~~~~~~~~d 81 (418)
T PRK07910 12 PNVVVTGIAMTTAL---ATDAETTWKLLLDGQSGIRTLD----DPFVEEFDLPVRIGGHLL-EEFD--HQLTRVELRRMS 81 (418)
T ss_pred CCEEEEeeEEECCC---CCCHHHHHHHHHcCCCeeEeCC----hhhhhccCCCcceEEEec-cCcc--ccCCHHHHhhcc
Confidence 35899999999999 478999998775310 000000 0111122233221 111 1110 00111 11112
Q ss_pred HHHHHHHHHHHHHHHhCCCC---CCCcCeEEEEcc-CCC-------------------------CCC-ChHHHHHHHcCC
Q 015082 77 EAEAVMFGAIDELFAKTSVK---PKDIGILIVNCS-LFN-------------------------PTP-SLSAMVINHYKL 126 (413)
Q Consensus 77 ~~~~la~~Aa~~aL~~ag~~---~~~Id~li~~s~-~~~-------------------------~~p-~~a~~v~~~lGl 126 (413)
....++..|+++||+++|++ ++.+. ++++++ ... ..+ ..+..+...+|+
T Consensus 82 ~~~~~~l~aa~~AledAg~~~~~~~r~G-v~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~ 160 (418)
T PRK07910 82 YLQRMSTVLGRRVWENAGSPEVDTNRLM-VSIGTGLGSAEELVFAYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLERHA 160 (418)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCcccEE-EEEEEccCccHhHHHHHHHHHhcCcccCChhHHHHhccccHHHHHHHHhCC
Confidence 35678899999999999973 44443 444432 110 011 245677788888
Q ss_pred CCCcceEEecCccchhHHHHHHHHHHHHHcCCCCeEEEEEEccccC----------CC-c-----------cCCCccchh
Q 015082 127 RGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENITL----------NW-Y-----------FGNDRSKLV 184 (413)
Q Consensus 127 ~~~~~~~~v~~~~C~~~~~al~~A~~~i~~g~~~~vLVv~~e~~s~----------~~-~-----------~~~d~~~~~ 184 (413)
. .+.+.+. .+|++++.||..|.++|++|.++.+||.++|.... .. . ++-|+..
T Consensus 161 ~--G~~~ti~-taCaS~~~Al~~A~~~I~~G~~d~aivgg~~~~~~~~~~~~f~~~~~~ls~~~~~~~~~~rPFd~~~-- 235 (418)
T PRK07910 161 K--AGVITPV-SACASGSEAIAQAWRQIVLGEADIAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDKDR-- 235 (418)
T ss_pred C--CCccccc-chhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCccccCCCCCCCCcCCCcCCC--
Confidence 6 5778888 69999999999999999999999999999986321 00 0 1111111
Q ss_pred hhcccccCceEEEEecCCC
Q 015082 185 SNCLFRMGGAAILLSNRFS 203 (413)
Q Consensus 185 ~~~lfGDGAaA~ll~~~~~ 203 (413)
..+++|+||+++||++.+.
T Consensus 236 ~G~v~gEGaa~vvLe~~~~ 254 (418)
T PRK07910 236 DGFVFGEGGALMVIETEEH 254 (418)
T ss_pred CCEeeeceEEEEEEeeHHH
Confidence 2578999999999997654
No 91
>PLN02287 3-ketoacyl-CoA thiolase
Probab=99.09 E-value=5e-10 Score=114.24 Aligned_cols=95 Identities=13% Similarity=0.191 Sum_probs=82.9
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCcCeEEEEcc-CCCCCC-ChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHH
Q 015082 77 EAEAVMFGAIDELFAKTSVKPKDIGILIVNCS-LFNPTP-SLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLL 154 (413)
Q Consensus 77 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~-~~~~~p-~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i 154 (413)
...+|+.+|++++|+++|++++|||.||+++. +....+ ..+..++..+|+++.+++++++ .+|++++.++..|...|
T Consensus 70 s~~eLa~eA~~~AL~dAgl~~~dID~vv~G~~~~~~~~~~~~~r~~a~~~Gl~~~~pa~~V~-~~CaSG~~Ai~~Aa~~I 148 (452)
T PLN02287 70 YPDDLLAPVLKAVVEKTGLNPSEVGDIVVGTVLAPGSQRANECRMAAFYAGFPETVPVRTVN-RQCSSGLQAVADVAAAI 148 (452)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCcccccchHHHHHHHHCCCCCCcceEEEe-ccCchHHHHHHHHHHHH
Confidence 36899999999999999999999999999865 443333 3456777888998568999999 79999999999999999
Q ss_pred HcCCCCeEEEEEEccccC
Q 015082 155 QVHPNSYALVISMENITL 172 (413)
Q Consensus 155 ~~g~~~~vLVv~~e~~s~ 172 (413)
++|.++.|||++.|++|.
T Consensus 149 ~sG~~dvvLv~GvE~mS~ 166 (452)
T PLN02287 149 KAGFYDIGIGAGVESMTT 166 (452)
T ss_pred HcCCCCeEEEEeEEecCC
Confidence 999999999999999875
No 92
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=99.08 E-value=6.2e-10 Score=112.10 Aligned_cols=94 Identities=13% Similarity=0.195 Sum_probs=85.2
Q ss_pred HHHHHHHHHHHHHHh-CCCCCCCcCeEEEEcc-CC-CCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHH
Q 015082 78 AEAVMFGAIDELFAK-TSVKPKDIGILIVNCS-LF-NPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLL 154 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~-ag~~~~~Id~li~~s~-~~-~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i 154 (413)
+.+|+.+|++++|++ +|+++++||.||+++. +. ...+..+..++..+|++.+++++.|+ ++|++++.|+..|.+.|
T Consensus 26 ~~~L~~~a~~~al~r~a~i~~~~Id~vi~G~~~~~~~~g~~~ar~~~l~~Gl~~~vp~~tV~-~~CaSG~~Av~~A~~~I 104 (400)
T PRK13359 26 ADDLGAVPLKALVERNPDVDWAAIDDVIYGCANQAGEDNRNVARMSLLLAGLPHGVPGSTIN-RLCGSGMDAVGVAARAI 104 (400)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEEe-ccchhHHHHHHHHHHHH
Confidence 578999999999997 5999999999999975 32 22377899999999999779999999 89999999999999999
Q ss_pred HcCCCCeEEEEEEccccC
Q 015082 155 QVHPNSYALVISMENITL 172 (413)
Q Consensus 155 ~~g~~~~vLVv~~e~~s~ 172 (413)
++|..+.+|+++.|++|.
T Consensus 105 ~sG~~divlagGvEsmS~ 122 (400)
T PRK13359 105 KSGEAALMIAGGVESMSR 122 (400)
T ss_pred HcCCCCEEEEeeeeccCC
Confidence 999999999999999986
No 93
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=99.08 E-value=4.5e-10 Score=114.32 Aligned_cols=94 Identities=11% Similarity=0.209 Sum_probs=83.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCeEEEEccC-CCCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHHc
Q 015082 78 AEAVMFGAIDELFAKTSVKPKDIGILIVNCSL-FNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQV 156 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~-~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~~ 156 (413)
..+|+.+|++++|+++|+++++||.++++++. ....+.++..++..+|++..++++.|+ ++|++++.|+..|++.|++
T Consensus 29 ~~eL~~~a~~~al~~agl~~~~ID~vi~G~~~~~~~~~~~ar~~a~~aGl~~~~P~~tV~-~aCaSG~~Ai~~Aa~~I~s 107 (428)
T PRK08963 29 AVDLGKMVVGELLARSEIDPELIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVS-RACATSFQAVANVAESIMA 107 (428)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCccHHHHHHHHHCCCCCCCcceeeh-hhhHHHHHHHHHHHHHHHC
Confidence 57899999999999999999999999999753 222355677899999998669999999 7999999999999999999
Q ss_pred CCCCeEEEEEEccccC
Q 015082 157 HPNSYALVISMENITL 172 (413)
Q Consensus 157 g~~~~vLVv~~e~~s~ 172 (413)
|.++.|||+++|++|.
T Consensus 108 G~~dvvLvgG~Esms~ 123 (428)
T PRK08963 108 GTIDIGIAGGADSSSV 123 (428)
T ss_pred CCCCEEEEecccccCC
Confidence 9999999999999986
No 94
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=99.07 E-value=6.9e-10 Score=111.46 Aligned_cols=94 Identities=12% Similarity=0.211 Sum_probs=83.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCeEEEEccC-CCC-CCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHH
Q 015082 78 AEAVMFGAIDELFAKTSVKPKDIGILIVNCSL-FNP-TPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQ 155 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~-~~~-~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~ 155 (413)
+.||+.+|++++|+++|+++++||.+++++.. ... ....+..+...+|++.+++++.|+ ++|++++.|+..|.+.|+
T Consensus 26 ~~eL~~~a~~~aL~~agi~~~~Id~v~~G~~~~~~~q~~~~ar~~~l~~Gl~~~~p~~tV~-~~CaSG~~A~~~A~~~I~ 104 (387)
T PRK07850 26 AAELLGAVQRAVLDRAGIDPGDVEQVIGGCVTQAGEQSNNITRTAWLHAGLPYHVGATTID-CQCGSAQQANHLVAGLIA 104 (387)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchHHHHHHHhCCCCCCCceEEEe-cccccHHHHHHHHHHHHH
Confidence 57899999999999999999999999999752 221 244677888889998669999999 799999999999999999
Q ss_pred cCCCCeEEEEEEccccC
Q 015082 156 VHPNSYALVISMENITL 172 (413)
Q Consensus 156 ~g~~~~vLVv~~e~~s~ 172 (413)
+|..+.+|+++.|++|.
T Consensus 105 sG~~dvvla~G~E~mS~ 121 (387)
T PRK07850 105 AGAIDVGIACGVEAMSR 121 (387)
T ss_pred CCCCCEEEEEeEecCCC
Confidence 99999999999999986
No 95
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=99.07 E-value=7.2e-10 Score=111.71 Aligned_cols=94 Identities=15% Similarity=0.202 Sum_probs=84.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCeEEEEcc-CC-CCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHH
Q 015082 78 AEAVMFGAIDELFAKTSVKPKDIGILIVNCS-LF-NPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQ 155 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~-~~-~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~ 155 (413)
+.+|+.+|++++|+++|+++++||.+++++. ++ ...+..+..++..+|++..++++.|+ ++|++++.|+..|.+.|+
T Consensus 26 ~~eL~~~a~~~al~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Glp~~~p~~tV~-~~CaSG~~Ai~~A~~~I~ 104 (401)
T PRK08131 26 PDDLAATVIRRLLEKSGFPGDDIEDVILGCTNQAGEDSRNVARNALLLAGLPVTVPGQTVN-RLCASGLAAVIDAARAIT 104 (401)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHhcCCCCCCceeeee-chhhhHHHHHHHHHHHHH
Confidence 5789999999999999999999999999975 33 22356777889999998679999999 799999999999999999
Q ss_pred cCCCCeEEEEEEccccC
Q 015082 156 VHPNSYALVISMENITL 172 (413)
Q Consensus 156 ~g~~~~vLVv~~e~~s~ 172 (413)
+|.++.+||++.|++|.
T Consensus 105 sG~~dvvlagG~Esms~ 121 (401)
T PRK08131 105 CGEGDLYLAGGVESMSR 121 (401)
T ss_pred CCCCCEEEEEEecCCCC
Confidence 99999999999999986
No 96
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=99.06 E-value=4.5e-10 Score=112.73 Aligned_cols=94 Identities=18% Similarity=0.277 Sum_probs=84.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCeEEEEcc-CCCCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHHc
Q 015082 78 AEAVMFGAIDELFAKTSVKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQV 156 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~-~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~~ 156 (413)
+.+|+.+|++++|+++|+++++||.+++++. ........+..++..+|++.+++++.|+ ++|++++.|+..|...|++
T Consensus 27 ~~~L~~~a~~~al~~agi~~~~Id~vv~G~~~~~~~g~~~~r~~~~~~Gl~~~~p~~~V~-~~CaSG~~Ai~~A~~~I~s 105 (392)
T PRK06633 27 APMLAAHLIKDILQNSKIDPALVNEVILGQVITGGSGQNPARQTLIHAGIPKEVPGYTIN-KVCGSGLKSVALAANSIMT 105 (392)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCccccccHHHHHHHHHCCCCCCccchhhc-chhHHHHHHHHHHHHHHHc
Confidence 6789999999999999999999999999964 3222446778888999998669999999 7999999999999999999
Q ss_pred CCCCeEEEEEEccccC
Q 015082 157 HPNSYALVISMENITL 172 (413)
Q Consensus 157 g~~~~vLVv~~e~~s~ 172 (413)
|.++.+|+++.|++|.
T Consensus 106 G~~dvvla~G~E~ms~ 121 (392)
T PRK06633 106 GDNEIVIAGGQENMSL 121 (392)
T ss_pred CCCCEEEEcccccCCC
Confidence 9999999999999985
No 97
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=99.04 E-value=1e-09 Score=110.69 Aligned_cols=94 Identities=13% Similarity=0.173 Sum_probs=84.1
Q ss_pred HHHHHHHHHHHHHHh-CCCCCCCcCeEEEEcc-C-CCCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHH
Q 015082 78 AEAVMFGAIDELFAK-TSVKPKDIGILIVNCS-L-FNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLL 154 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~-ag~~~~~Id~li~~s~-~-~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i 154 (413)
+.+|+.+|++++|++ +|+++++||.|++++. + ....+..+..++..+|++.+++++.|+ ++|++++.|+..|.+.|
T Consensus 26 ~~~L~~~a~~~al~~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~vP~~tV~-~aCaSG~~Ai~~A~~~I 104 (401)
T PRK09050 26 ADDLGAVPLKALMARNPGVDWEAVDDVIYGCANQAGEDNRNVARMSALLAGLPVSVPGTTIN-RLCGSGMDAVGTAARAI 104 (401)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccchHHHHHHHHcCCCCCCceEEEe-cccccHHHHHHHHHHHH
Confidence 578999999999995 7999999999999975 2 222366788899999998679999999 79999999999999999
Q ss_pred HcCCCCeEEEEEEccccC
Q 015082 155 QVHPNSYALVISMENITL 172 (413)
Q Consensus 155 ~~g~~~~vLVv~~e~~s~ 172 (413)
++|.++.+||++.|++|.
T Consensus 105 ~sG~~dvvlagGvEsmS~ 122 (401)
T PRK09050 105 KAGEAELMIAGGVESMSR 122 (401)
T ss_pred HCCCCCEEEEeccccccc
Confidence 999999999999999986
No 98
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=99.03 E-value=1.3e-09 Score=110.28 Aligned_cols=93 Identities=13% Similarity=0.204 Sum_probs=82.0
Q ss_pred HHHHHHHHHHHHHHhC-CCCCCCcCeEEEEcc-CC-CCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHH
Q 015082 78 AEAVMFGAIDELFAKT-SVKPKDIGILIVNCS-LF-NPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLL 154 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~a-g~~~~~Id~li~~s~-~~-~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i 154 (413)
..||+.+|+++||+++ |++++|||.+++++. +. ...+..+..++..+|++ .++++.++ ++|+++..++..|.+.|
T Consensus 27 ~~eL~~~A~~~AL~da~gl~~~dID~vv~g~~~~~~~~g~~~~~~~a~~lGl~-~~p~~~v~-~~caSG~~av~~Aa~~I 104 (406)
T PRK07851 27 PDDLAAQMVRAALDKVPALDPTDIDDLMLGCGLPGGEQGFNMARVVAVLLGYD-FLPGTTVN-RYCSSSLQTTRMAFHAI 104 (406)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCCEEEEEcccccccccCCHHHHHHHHcCCC-CCCeeeee-ccchhHHHHHHHHHHHH
Confidence 5789999999999997 999999999998853 32 22356678899999997 58999999 79999999999999999
Q ss_pred HcCCCCeEEEEEEccccC
Q 015082 155 QVHPNSYALVISMENITL 172 (413)
Q Consensus 155 ~~g~~~~vLVv~~e~~s~ 172 (413)
++|.++.|||+++|++|.
T Consensus 105 ~sG~~d~vLv~G~e~~s~ 122 (406)
T PRK07851 105 KAGEGDVFISAGVETVSR 122 (406)
T ss_pred HCCCCCEEEEeeEEeccc
Confidence 999999999999999875
No 99
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=99.03 E-value=1.3e-09 Score=109.54 Aligned_cols=94 Identities=15% Similarity=0.226 Sum_probs=82.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCeEEEEcc-CCCCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHHc
Q 015082 78 AEAVMFGAIDELFAKTSVKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQV 156 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~-~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~~ 156 (413)
+.+|+.+|++++|+++|++++|||.+++++. +.......+..++..+|++..++.+.++ ++|++++.++..|.+.|++
T Consensus 26 ~~~L~~~a~~~al~dagi~~~dID~vi~g~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~v~-~~caSg~~av~~Aa~~I~s 104 (388)
T PRK06366 26 APQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGVGQNPAGQAAYHAGLPFGVTKYTVN-VVCASGMLAVESAAREIML 104 (388)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCccCcHHHHHHHHCCCCCCCcceeee-chhhHHHHHHHHHHHHHhc
Confidence 5789999999999999999999999999864 2222334577899999998568999999 7999999999999999999
Q ss_pred CCCCeEEEEEEccccC
Q 015082 157 HPNSYALVISMENITL 172 (413)
Q Consensus 157 g~~~~vLVv~~e~~s~ 172 (413)
|.++.|||++.|++|.
T Consensus 105 G~~d~vla~G~e~ms~ 120 (388)
T PRK06366 105 GERDLVIAGGMENMSN 120 (388)
T ss_pred CCCCEEEEEeeEcccc
Confidence 9999999999999874
No 100
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=99.02 E-value=9.4e-10 Score=111.80 Aligned_cols=94 Identities=13% Similarity=0.182 Sum_probs=83.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCeEEEEcc-CCCCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHHc
Q 015082 78 AEAVMFGAIDELFAKTSVKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQV 156 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~-~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~~ 156 (413)
..+|+.+|++++|+++|+++++||.+|+++. .....+.++..+.-..|++..++++.|+ ++|++++.|+..|++.|++
T Consensus 31 ~~~L~~~a~~~al~~agl~~~~Id~vi~G~~~~~~~~~~~ar~~~l~aGl~~~~p~~~V~-~~CaSG~~A~~~a~~~I~s 109 (430)
T TIGR02446 31 AVDLGKMVVSELLARSEIDPKLIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVT-RACATSFQSAVNVAESIMA 109 (430)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCcCccchHHHHHHHhCCCCCCCchhhhh-hhhhHHHHHHHHHHHHHHC
Confidence 5799999999999999999999999999964 3222245677777778998679999999 7999999999999999999
Q ss_pred CCCCeEEEEEEccccC
Q 015082 157 HPNSYALVISMENITL 172 (413)
Q Consensus 157 g~~~~vLVv~~e~~s~ 172 (413)
|.++.+|+++.|++|.
T Consensus 110 G~~dvvla~G~E~mS~ 125 (430)
T TIGR02446 110 GAIDIGIAGGADSSSV 125 (430)
T ss_pred CCCCEEEEeeeEcccC
Confidence 9999999999999985
No 101
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=99.00 E-value=1.8e-09 Score=108.69 Aligned_cols=94 Identities=16% Similarity=0.201 Sum_probs=84.2
Q ss_pred HHHHHHHHHHHHHHh-CCCCCCCcCeEEEEcc-C-CCCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHH
Q 015082 78 AEAVMFGAIDELFAK-TSVKPKDIGILIVNCS-L-FNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLL 154 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~-ag~~~~~Id~li~~s~-~-~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i 154 (413)
+.+|+.+|++++|++ +|+++++||.|++++. . ....+..+..++..+|++.+++++.|+ ++|++++.|+..|.+.|
T Consensus 25 ~~~L~~~a~~~al~~~a~i~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~~p~~~V~-~~CaSG~~Ai~~a~~~I 103 (400)
T TIGR02430 25 ADDLAAVPIKALLARNPQLDWAAIDDVIYGCANQAGEDNRNVARMAALLAGLPVSVPGTTVN-RLCGSGLDAIGMAARAI 103 (400)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEee-chhhhHHHHHHHHHHHH
Confidence 578999999999995 7999999999999964 2 222367888899999998669999999 79999999999999999
Q ss_pred HcCCCCeEEEEEEccccC
Q 015082 155 QVHPNSYALVISMENITL 172 (413)
Q Consensus 155 ~~g~~~~vLVv~~e~~s~ 172 (413)
++|..+.+|+++.|++|.
T Consensus 104 ~sG~~d~~la~G~E~ms~ 121 (400)
T TIGR02430 104 KAGEADLLIAGGVESMSR 121 (400)
T ss_pred HCCCCCEEEEeccccccC
Confidence 999999999999999986
No 102
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=99.00 E-value=2.4e-09 Score=107.95 Aligned_cols=94 Identities=18% Similarity=0.169 Sum_probs=81.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCeEEEEccC-CCCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHHc
Q 015082 78 AEAVMFGAIDELFAKTSVKPKDIGILIVNCSL-FNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQV 156 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~-~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~~ 156 (413)
..+|+.+|++++|+++|+++++||.|++++.. ....+..+..++..+|++...+++.++ .+|++++.++..|.+.|++
T Consensus 25 ~~~L~~~a~~~al~dAgl~~~~ID~vv~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~~~v~-~~caSg~~av~~Aa~~I~s 103 (394)
T PLN02644 25 ATELGSIAIQAALERAGVDPALVQEVFFGNVLSANLGQAPARQAALGAGLPPSTICTTVN-KVCASGMKAVMLAAQSIQL 103 (394)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCcCCcCCcHHHHHHHhcCCCCCCceEEEe-ccchHHHHHHHHHHHHHHc
Confidence 46899999999999999999999999988642 111234566788999998668899999 7999999999999999999
Q ss_pred CCCCeEEEEEEccccC
Q 015082 157 HPNSYALVISMENITL 172 (413)
Q Consensus 157 g~~~~vLVv~~e~~s~ 172 (413)
|.++.|||++.|++|.
T Consensus 104 G~~d~vlv~G~E~~s~ 119 (394)
T PLN02644 104 GINDVVVAGGMESMSN 119 (394)
T ss_pred CCCCEEEEEeEEecCC
Confidence 9999999999999874
No 103
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=98.99 E-value=1.6e-09 Score=109.11 Aligned_cols=93 Identities=15% Similarity=0.159 Sum_probs=76.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCeEEEEcc-CCCC--CCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHH
Q 015082 78 AEAVMFGAIDELFAKTSVKPKDIGILIVNCS-LFNP--TPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLL 154 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~-~~~~--~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i 154 (413)
..+|+.+|++++|+++|+++++||.|+++++ ++.. ....+..+...+|+. .+++++++ ++|++++.||..|..+|
T Consensus 22 ~~eL~~eA~~~AL~dAgl~~~dId~vi~g~~~~~~~~~~~~~~~~~~~~~gl~-~~p~~~v~-~~CaSg~~Al~~A~~~I 99 (389)
T PRK07516 22 LESLIVRVAREALAHAGIAAGDVDGIFLGHFNAGFSPQDFPASLVLQADPALR-FKPATRVE-NACATGSAAVYAALDAI 99 (389)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCccccccchhHHHHHhcCCC-CCceeeec-cccHHHHHHHHHHHHHH
Confidence 4688899999999999999999999999864 2211 111233344567887 68999999 79999999999999999
Q ss_pred HcCCCCeEEEEEEccccC
Q 015082 155 QVHPNSYALVISMENITL 172 (413)
Q Consensus 155 ~~g~~~~vLVv~~e~~s~ 172 (413)
++|.+++|||+++|++|.
T Consensus 100 ~sG~~d~vLvvg~e~~s~ 117 (389)
T PRK07516 100 EAGRARIVLVVGAEKMTA 117 (389)
T ss_pred HCCCCCEEEEEEehhhcc
Confidence 999999999999998764
No 104
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=98.99 E-value=2.5e-09 Score=107.44 Aligned_cols=94 Identities=13% Similarity=0.216 Sum_probs=81.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCeEEEEcc-C-CCCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHH
Q 015082 78 AEAVMFGAIDELFAKTSVKPKDIGILIVNCS-L-FNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQ 155 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~-~-~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~ 155 (413)
+.||+.+|++++|+++|+++++||.+|+++. + ....+..+..+.-..|++.+++.+.|+ ++|++++.|+..|.+.|+
T Consensus 26 ~~~L~~~a~~~al~~a~l~~~~Id~vi~G~~~~~~~~~~~~ar~~~l~~gl~~~vP~~tV~-~~CaSG~~Ai~~A~~~I~ 104 (390)
T PRK06504 26 PADLAAQVLDALVDRSGADPALIEDVIMGCVSQVGEQATNVARNAVLASKLPESVPGTSID-RQCGSSQQALHFAAQAVM 104 (390)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEEe-chhhHHHHHHHHHHHHHH
Confidence 5789999999999999999999999999964 2 222345666666666887679999999 799999999999999999
Q ss_pred cCCCCeEEEEEEccccC
Q 015082 156 VHPNSYALVISMENITL 172 (413)
Q Consensus 156 ~g~~~~vLVv~~e~~s~ 172 (413)
+|.++.+||++.|++|.
T Consensus 105 sG~~dvvLagGvEsmS~ 121 (390)
T PRK06504 105 SGTMDIVIAAGVESMTR 121 (390)
T ss_pred CCCCCEEEEeeeeecCC
Confidence 99999999999999986
No 105
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=98.97 E-value=3.6e-09 Score=107.74 Aligned_cols=94 Identities=17% Similarity=0.149 Sum_probs=79.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCC--cCeEEEEcc-CCC--CCCChHHHHHHHcCCC------CCcceEEecCccchhHHHH
Q 015082 78 AEAVMFGAIDELFAKTSVKPKD--IGILIVNCS-LFN--PTPSLSAMVINHYKLR------GNIISYNLGGMGCSAGLIS 146 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~~--Id~li~~s~-~~~--~~p~~a~~v~~~lGl~------~~~~~~~v~~~~C~~~~~a 146 (413)
..||+.+|++++|+++|++++| ||.+++++. ... ..+..+..++..+|++ ..++++.|+ ++|++++.|
T Consensus 48 ~~eL~~~a~~~al~~agl~~~d~~ID~vi~G~~~~~~~~~~~~~a~~~~~~~gl~~~~~gl~~~p~~~V~-~~caSG~~A 126 (438)
T PTZ00455 48 LEELLATAIQGTLENTGLDGKAALVDKVVVGNFLGELFSSQGHLGPAAVGSLGQSGASNALLYKPAMRVE-GACASGGLA 126 (438)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCcCEEEEEeccccccccccchHHHHHHhccCcccccccCCCceeEEE-CcCHHHHHH
Confidence 5789999999999999999999 999999864 221 2355677777565554 368999999 799999999
Q ss_pred HHHHHHHHHcCCCCeEEEEEEccccC
Q 015082 147 IDLANNLLQVHPNSYALVISMENITL 172 (413)
Q Consensus 147 l~~A~~~i~~g~~~~vLVv~~e~~s~ 172 (413)
+..|.+.|++|.++.|||+++|++|.
T Consensus 127 i~~A~~~I~sG~~dvvlv~G~E~ms~ 152 (438)
T PTZ00455 127 VQSAWEALLAGTSDIALVVGVEVQTT 152 (438)
T ss_pred HHHHHHHHHCCCCCEEEEEEEeeccc
Confidence 99999999999999999999999876
No 106
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=98.95 E-value=3.9e-09 Score=106.53 Aligned_cols=93 Identities=20% Similarity=0.170 Sum_probs=79.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCeEEEEcc-CCCCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHHc
Q 015082 78 AEAVMFGAIDELFAKTSVKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQV 156 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~-~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~~ 156 (413)
..+|+.+|++++|+++|++++|||.|++++. .++........+++.+|++ ..+++.++ ++|++++.++..|+..|++
T Consensus 27 ~~~L~~ea~~~AL~dagl~~~dID~v~vg~~~~~~~~~~~~~~~a~~lGl~-~~~~~~v~-~~c~sg~~ai~~A~~~I~s 104 (398)
T PRK06157 27 AEDLMVEAFLEALADAGIEPKDIDAAWFGTHYDEIGSGKSGTPLSRALRLP-NIPVTRVE-NFCATGSEAFRGAVYAVAS 104 (398)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchhHHHHHHcCCC-CCCEEEEe-cccHHHHHHHHHHHHHHHC
Confidence 4689999999999999999999999998864 2221122346788899998 48999999 7999999999999999999
Q ss_pred CCCCeEEEEEEccccC
Q 015082 157 HPNSYALVISMENITL 172 (413)
Q Consensus 157 g~~~~vLVv~~e~~s~ 172 (413)
|.++.|||+++|++|.
T Consensus 105 G~~d~vlv~G~e~~s~ 120 (398)
T PRK06157 105 GAYDIALALGVEKLKD 120 (398)
T ss_pred CCCCEEEEEEEeeccc
Confidence 9999999999998764
No 107
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=98.95 E-value=4.5e-09 Score=105.63 Aligned_cols=94 Identities=14% Similarity=0.141 Sum_probs=86.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCeEEEEcc-C-CCCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHH
Q 015082 78 AEAVMFGAIDELFAKTSVKPKDIGILIVNCS-L-FNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQ 155 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~-~-~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~ 155 (413)
+.+|+..+++.+|+++++++++||.||+++. + ....+++++.++-..|++.+++++.|+ ..|+|++.|+.+|++.|+
T Consensus 29 ~~~L~~~~~~~~l~r~~i~~~~id~vi~G~~~~~g~~g~n~aR~~al~aglp~~vp~~tvn-r~C~Sgl~ai~~aa~~I~ 107 (417)
T PRK06025 29 PQHLAATVLKALAERNGLNTADVDDIIWSTSSQRGKQGGDLGRMAALDAGYDIKASGVTLD-RFCGGGITSVNLAAAQIM 107 (417)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHCCEEEEEcCCCcCcccCcHHHHHHHhCCCCCCCCeeeec-cccchHHHHHHHHHHHHH
Confidence 6789999999999999999999999999975 3 322478999999999999899999999 899999999999999999
Q ss_pred cCCCCeEEEEEEccccC
Q 015082 156 VHPNSYALVISMENITL 172 (413)
Q Consensus 156 ~g~~~~vLVv~~e~~s~ 172 (413)
+|..+.+|+.+.|.+|+
T Consensus 108 ~G~~~~~laGG~EsmS~ 124 (417)
T PRK06025 108 SGMEDLVIAGGTEMMSY 124 (417)
T ss_pred cCCCCEEEEeeeeccCC
Confidence 99999999999999996
No 108
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=98.95 E-value=3.1e-09 Score=107.53 Aligned_cols=91 Identities=19% Similarity=0.151 Sum_probs=73.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCeEEEEcc-CCCCC-----CChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHH
Q 015082 78 AEAVMFGAIDELFAKTSVKPKDIGILIVNCS-LFNPT-----PSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLAN 151 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~-~~~~~-----p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~ 151 (413)
..||+.+|++++|+++|++++|||.||+++. +++.. +..... ...++. ..++++++ ++|++++.+|.+|.
T Consensus 26 ~~eLa~eA~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~--~~~~~~-g~~~~~v~-~~Casg~~al~~Aa 101 (403)
T PRK06289 26 FADLTREVVDGTLAAAGVDADDIEVVHVGNFFGELFAGQGHLGAMPAT--VHPALW-GVPASRHE-AACASGSVATLAAM 101 (403)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccccchHHHH--HhhcCC-CCceeecc-cccHHHHHHHHHHH
Confidence 4688899999999999999999999999864 43221 222222 223443 46789999 79999999999999
Q ss_pred HHHHcCCCCeEEEEEEccccC
Q 015082 152 NLLQVHPNSYALVISMENITL 172 (413)
Q Consensus 152 ~~i~~g~~~~vLVv~~e~~s~ 172 (413)
.+|++|.+++|||+++|++|.
T Consensus 102 ~~I~sG~~~~VLvvg~e~~s~ 122 (403)
T PRK06289 102 ADLRAGRYDVALVVGVELMKT 122 (403)
T ss_pred HHHHcCCCCEEEEEEEEecCC
Confidence 999999999999999998764
No 109
>PRK06158 thiolase; Provisional
Probab=98.94 E-value=2.1e-09 Score=108.05 Aligned_cols=87 Identities=16% Similarity=0.060 Sum_probs=74.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCeEEEEccCCCCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHHcC
Q 015082 78 AEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVH 157 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~~g 157 (413)
..+|+.+|+++||+++|++++|||.+++++.. ...|. ..+++.||++ ..++++++ .+|+++..+|+.|..+|++|
T Consensus 28 ~~eL~~eA~~~Al~dAgl~~~dID~iv~~~~~-~~~~~--~~la~~lGl~-~~~~~~~~-~g~~s~~~al~~A~~~I~sG 102 (384)
T PRK06158 28 AMELLAQAAHRALADAGLTMADVDGLFTASPD-DALWG--LSVAEYLGIR-PRFVDGTM-IGGSSFLAHLLPAALALEAG 102 (384)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecCC-CCCcH--HHHHHHcCCC-Ceeecccc-CccHHHHHHHHHHHHHHHcC
Confidence 46888999999999999999999999988642 22333 5799999998 57889998 79999999999999999999
Q ss_pred CCCeEEEE-EEcc
Q 015082 158 PNSYALVI-SMEN 169 (413)
Q Consensus 158 ~~~~vLVv-~~e~ 169 (413)
.+++|||+ +.|+
T Consensus 103 ~~d~vLV~~g~~~ 115 (384)
T PRK06158 103 LCDVALICYGSNQ 115 (384)
T ss_pred CCCEEEEeecccc
Confidence 99999998 4443
No 110
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=98.94 E-value=3.3e-09 Score=106.57 Aligned_cols=94 Identities=13% Similarity=0.161 Sum_probs=82.7
Q ss_pred HHHHHHHHHHHHHHh-CCCCCCCcCeEEEEccC-CCC-CCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHH
Q 015082 78 AEAVMFGAIDELFAK-TSVKPKDIGILIVNCSL-FNP-TPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLL 154 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~-ag~~~~~Id~li~~s~~-~~~-~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i 154 (413)
+.+|+..+++++|++ +|+++++||.+++++.. ... .+..+..++..+|++..++++.|+ ++|++++.|+..|...|
T Consensus 27 ~~~L~~~~~~~al~~~agl~~~~Id~vi~g~~~~~~~~g~~~ar~~~~~~Gl~~~~p~~~V~-~~caSG~~Ai~~A~~~I 105 (387)
T PRK08947 27 AEDLSAHLMRSLLARNPALDPAEIDDIIWGCVQQTLEQGFNIARNAALLAGIPHSVPAVTVN-RLCGSSMQALHDAARAI 105 (387)
T ss_pred HHHHHHHHHHHHHHhccCcChHHhCeEEEEeccccccccccHHHHHHHHcCCCCCCcceeee-chhHHHHHHHHHHHHHH
Confidence 578999999999996 79999999999999753 222 245677888999998669999999 79999999999999999
Q ss_pred HcCCCCeEEEEEEccccC
Q 015082 155 QVHPNSYALVISMENITL 172 (413)
Q Consensus 155 ~~g~~~~vLVv~~e~~s~ 172 (413)
++|.++.+||++.|++|.
T Consensus 106 ~sG~~d~vlv~G~E~ms~ 123 (387)
T PRK08947 106 MTGDGDVFLIGGVEHMGH 123 (387)
T ss_pred HCCCCCEEEEcccccccc
Confidence 999999999999999885
No 111
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=98.90 E-value=3.8e-08 Score=97.16 Aligned_cols=120 Identities=11% Similarity=0.022 Sum_probs=86.1
Q ss_pred HHHHHHHHHHHHHHhCCC--CCCCcCeEEEEcc-CCC-----------------C--------CC-ChHHHHHHHcCCCC
Q 015082 78 AEAVMFGAIDELFAKTSV--KPKDIGILIVNCS-LFN-----------------P--------TP-SLSAMVINHYKLRG 128 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~--~~~~Id~li~~s~-~~~-----------------~--------~p-~~a~~v~~~lGl~~ 128 (413)
...++..|++++|+++|+ +++++. |+++++ ... . ++ ..+.++...+|+.
T Consensus 4 ~~~~~~~a~~~a~~~a~~~~~~~r~G-v~~G~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~~l~- 81 (342)
T PRK14691 4 WWRYKWITFHPSLTHADNTEKQERTA-TIIGAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHVSIKHHFK- 81 (342)
T ss_pred HHHHHHHHHHHHHHhCCCCCCcccEE-EEEecCcccHHHHHHHHHHHHhcCccccChhHHhhhhhhHHHHHHHHHhCCC-
Confidence 356779999999999996 456664 444432 110 0 11 2567888899996
Q ss_pred CcceEEecCccchhHHHHHHHHHHHHHcCCCCeEEEEEEccccCC-----C-----------------ccCCCccchhhh
Q 015082 129 NIISYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENITLN-----W-----------------YFGNDRSKLVSN 186 (413)
Q Consensus 129 ~~~~~~v~~~~C~~~~~al~~A~~~i~~g~~~~vLVv~~e~~s~~-----~-----------------~~~~d~~~~~~~ 186 (413)
-+.+.+. .+|++++.||..|.++|+.|..+.+||.++|..... | .++-|+.. +.
T Consensus 82 -Gp~~ti~-~aCaSg~~Al~~A~~~I~~G~~d~~ivgg~d~~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r--~G 157 (342)
T PRK14691 82 -GPIGAPV-TACAAGVQAIGDAVRMIRNNEADVALCGGAEAVIDTVSLAGFAAARALSTHFNSTPEKASRPFDTAR--DG 157 (342)
T ss_pred -CCccccc-cHhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHhhhhhcCCCCCCCcCCCCCCCCC--CC
Confidence 6888899 699999999999999999999999999999863210 0 01112111 25
Q ss_pred cccccCceEEEEecCCC
Q 015082 187 CLFRMGGAAILLSNRFS 203 (413)
Q Consensus 187 ~lfGDGAaA~ll~~~~~ 203 (413)
+++||||+++||++.+.
T Consensus 158 ~v~gEGAa~lvLes~~~ 174 (342)
T PRK14691 158 FVMGEGAGLLIIEELEH 174 (342)
T ss_pred ccccceEEEEEEeeHHH
Confidence 78999999999997654
No 112
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.89 E-value=9.5e-08 Score=96.27 Aligned_cols=220 Identities=19% Similarity=0.070 Sum_probs=133.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcC----eEEEEcc-CC--C-----------------------------------CCC-
Q 015082 78 AEAVMFGAIDELFAKTSVKPKDIG----ILIVNCS-LF--N-----------------------------------PTP- 114 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~~Id----~li~~s~-~~--~-----------------------------------~~p- 114 (413)
...|+..|+++||+++|++..+.+ .|+++++ .. . .++
T Consensus 73 ~~~~a~~Aa~~Al~dAGl~~~~~~~~r~GvivGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n 152 (398)
T PRK06519 73 WQRLGTYAAGLALDDAGIKGNEELLSTMDMIVAAGGGERDIAVDTAILNEARKRNDRGVLLNERLMTELRPTLFLAQLSN 152 (398)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCCccceEEEEEeCCCchhHHHhhhhhhcccchhHHHHHHHhcCCCccChhhhhhhhhh
Confidence 567889999999999999643322 2444432 11 0 011
Q ss_pred ChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHHcCCCCeEEEEEEccccC----------CCc-----cC-C
Q 015082 115 SLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENITL----------NWY-----FG-N 178 (413)
Q Consensus 115 ~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~~g~~~~vLVv~~e~~s~----------~~~-----~~-~ 178 (413)
..+..|+..+|+. -+.+.+. .+|++++.||..|.++|++|.++.+||+++|.... .+. .+ .
T Consensus 153 ~~a~~is~~~gl~--Gp~~ti~-~acaSg~~Ai~~A~~~I~~G~~d~~lvGG~d~~~~~~~~~~~~~~~~ls~~~~~p~~ 229 (398)
T PRK06519 153 LLAGNISIVHKVT--GSSRTFM-GEESAGVSAIEIAFARIASGQSDHALVGGAYNAERPDMLLLYELGGLLLKGGWAPVW 229 (398)
T ss_pred HHHHHHHHHhCCC--Ccccccc-CCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHcCccCCCCCCchh
Confidence 2467788899996 5888999 79999999999999999999999999999986211 000 01 1
Q ss_pred Ccc--chhhhcccccCceEEEEecCCCCcccccceEeeeeeeecCCCCccccccccccCCCCceeeEecchhhHHhHHhh
Q 015082 179 DRS--KLVSNCLFRMGGAAILLSNRFSDRRRSKYRLVHTVRTHKGADDNCFACVTQEEDSEGKVGVTLSKNLMAVAGDAL 256 (413)
Q Consensus 179 d~~--~~~~~~lfGDGAaA~ll~~~~~~~~~~~~~i~~~~~~~~~td~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~ 256 (413)
|+. . =..++.|+||+++||++.+....+ +-.+...+..+ .++.. +. +. . +
T Consensus 230 d~~~~~-r~G~v~GEGAa~lvLE~~~~A~~R-ga~i~AeI~G~-~~d~~-------~~----------~~---~--~--- 281 (398)
T PRK06519 230 SRGGED-GGGFILGSGGAFLVLESREHAEAR-GARPYARISGV-ESDRA-------RR----------AP---G--D--- 281 (398)
T ss_pred ccCccC-CCCeeeeceEEEEEEeeHHHHHhC-CCceEEEEEEE-eecCC-------CC----------Ch---H--H---
Confidence 210 0 025789999999999986542111 11111111111 11110 00 00 0 0
Q ss_pred hhhhhhcCCCccchhHHHHHHHHHHHHHhhhhccCCCccchhccccEEEecCCChH-----HHHHHHHhcCCCcccchhh
Q 015082 257 KTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDFKLAFEHFCIHAGGRA-----VLDELEKNLQLSDWHMEPS 331 (413)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~al~~~~~~~~~did~~i~hq~~~~-----~~~~i~~~lgi~~e~~~~s 331 (413)
-.+.++.+++. .+. ++|||++..|..+-. -.+.+.+.++++.
T Consensus 282 -------------------------~~~am~~AL~~-Agl-~~~IdyI~ahgtgT~~~D~~E~~Ai~~~f~~pv------ 328 (398)
T PRK06519 282 -------------------------LEASLERLLKP-AGG-LAAPTAVISGATGAHPATAEEKAALEAALAGPV------ 328 (398)
T ss_pred -------------------------HHHHHHHHHHH-CCC-cccCCEEEeCCCCCCCccHHHHHHHHHHcCCCc------
Confidence 01233444443 333 589999999977643 3445667777552
Q ss_pred HHHHhhhcCCCcchHHHHHH---HHHHcCCCCC
Q 015082 332 RMTLYRFGNTSSSSLWYELA---YSEAKGRIKK 361 (413)
Q Consensus 332 ~~~l~~~Gn~~sasi~i~L~---~~~~~g~l~~ 361 (413)
..+-..+||+.+|+=.+.+. ..+++|.+.|
T Consensus 329 sS~Ks~~GH~l~AAGa~e~i~~~lal~~g~vpp 361 (398)
T PRK06519 329 RGIGTLFGHTMEAQFPLGLALAALSVSKGALFP 361 (398)
T ss_pred cccchhhccchHHHHHHHHHHHHHHHhcCccCC
Confidence 23445799999988666664 3555665543
No 113
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=98.88 E-value=5.2e-09 Score=105.06 Aligned_cols=94 Identities=13% Similarity=0.167 Sum_probs=81.7
Q ss_pred HHHHHHHHHHHHHHh-CCCCCCCcCeEEEEccC-C-CCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHH
Q 015082 78 AEAVMFGAIDELFAK-TSVKPKDIGILIVNCSL-F-NPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLL 154 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~-ag~~~~~Id~li~~s~~-~-~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i 154 (413)
+.||+.+|++++|++ +|+++++||.+++++.. . ...+..+..+....|++..++++.|+ ++|++++.|+..|.+.|
T Consensus 25 ~~~L~~~a~~~al~~~agl~~~~Id~v~~G~~~~~~~~g~~~ar~~~~~~g~~~~~p~~tV~-~~CaSG~~Ai~~Aa~~I 103 (385)
T TIGR02445 25 AEDLSAHLMSKLLARNPKVDPAEVEDIYWGCVQQTLEQGFNIARNAALLAQIPHTSAAVTVN-RLCGSSMQALHDAARAI 103 (385)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHcCEEEEecccccccccchHHHHHHHHCCCCCCcchhhhh-hhhHHHHHHHHHHHHHH
Confidence 568999999999996 59999999999999752 1 11244677777788998779999999 79999999999999999
Q ss_pred HcCCCCeEEEEEEccccC
Q 015082 155 QVHPNSYALVISMENITL 172 (413)
Q Consensus 155 ~~g~~~~vLVv~~e~~s~ 172 (413)
++|..+.+|+++.|++|.
T Consensus 104 ~sG~~d~vlagG~E~ms~ 121 (385)
T TIGR02445 104 MTGDADVCLVGGVEHMGH 121 (385)
T ss_pred HCCCCCEEEEeeehhccc
Confidence 999999999999999885
No 114
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=98.88 E-value=8.4e-09 Score=105.00 Aligned_cols=93 Identities=14% Similarity=0.044 Sum_probs=77.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCeEEEEccCC-CCCCChH-HHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHH
Q 015082 78 AEAVMFGAIDELFAKTSVKPKDIGILIVNCSLF-NPTPSLS-AMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQ 155 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a-~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~ 155 (413)
..+|+.+|+++||+++|++++|||.+++++..+ ......+ ..++..||++ .++++.++ .+|+++..++..|+..|+
T Consensus 37 ~~eL~~eA~~~Al~dagl~~~dID~vv~~~~~~~~~g~~~~~~~~~~~lGl~-~~~~~~v~-~~~aSg~~ai~~A~~~I~ 114 (430)
T PRK06365 37 FRERVKKAFDYAMNDAGLTLADIDGSVASYFSDHFQRQLLAGIMVQDYLGLV-PKPSKRIE-GGGATGGLAFQAGYEEIA 114 (430)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEecccccccccchhhHHHHHhcCCC-CCceEEEe-CCcHHHHHHHHHHHHHHH
Confidence 468999999999999999999999988775432 1122233 3467999998 48999999 799999999999999999
Q ss_pred cCCCCeEEEEEEccccC
Q 015082 156 VHPNSYALVISMENITL 172 (413)
Q Consensus 156 ~g~~~~vLVv~~e~~s~ 172 (413)
+|.++.|||+++|++|.
T Consensus 115 sG~~~~vLv~G~e~~s~ 131 (430)
T PRK06365 115 SGRMDCVAVYGFETMSH 131 (430)
T ss_pred cCCCCEEEEEEeeeccc
Confidence 99999999999997653
No 115
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=98.87 E-value=1.2e-08 Score=103.69 Aligned_cols=94 Identities=14% Similarity=0.212 Sum_probs=80.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCeEEEEcc-CCCCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHHc
Q 015082 78 AEAVMFGAIDELFAKTSVKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQV 156 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~-~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~~ 156 (413)
..||+.+|++++|+++|+++++||.+++++. +....+..+..+....|++...+++.|+ ++|++++.++..|...|++
T Consensus 31 ~~eL~~~a~~~al~~agl~~~~Id~vv~G~~~~~~~~~~~~r~~~l~~gl~~~~p~~~V~-~~CaSG~~ai~~A~~~I~s 109 (427)
T PRK09268 31 NQDMLTAALDGLVDRFGLQGERLGEVVAGAVLKHSRDFNLTRECVLGSALSPYTPAYDLQ-QACGTGLEAAILVANKIAL 109 (427)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCccccHHHHHHHHcCCCCCCceeeee-chhhHHHHHHHHHHHHHHC
Confidence 5789999999999999999999999999964 2111244677766666776568999999 7999999999999999999
Q ss_pred CCCCeEEEEEEccccC
Q 015082 157 HPNSYALVISMENITL 172 (413)
Q Consensus 157 g~~~~vLVv~~e~~s~ 172 (413)
|.++.+||+++|++|.
T Consensus 110 G~~d~vlvgG~E~ms~ 125 (427)
T PRK09268 110 GQIDSGIAGGVDTTSD 125 (427)
T ss_pred CCCCEEEEeeEEccCC
Confidence 9999999999999985
No 116
>PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B ....
Probab=98.85 E-value=3.6e-08 Score=93.18 Aligned_cols=120 Identities=19% Similarity=0.252 Sum_probs=84.8
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCcC-----eEEEEcc-CCC-------------------C----CC-ChHHHHHHHcCC
Q 015082 77 EAEAVMFGAIDELFAKTSVKPKDIG-----ILIVNCS-LFN-------------------P----TP-SLSAMVINHYKL 126 (413)
Q Consensus 77 ~~~~la~~Aa~~aL~~ag~~~~~Id-----~li~~s~-~~~-------------------~----~p-~~a~~v~~~lGl 126 (413)
....|+..|+.+||+++|+++++++ .|+++++ .++ . .+ ..+.+|+..+|+
T Consensus 86 ~~~~~~l~aa~~Al~dAg~~~~~~~~~~r~gv~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl 165 (254)
T PF00109_consen 86 RQSRLALAAAREALEDAGLDPDDLDGERRVGVFVGSSSGDYEFYRALDEDGETPRDVSPWFVPNTLPNSAAGRIAILFGL 165 (254)
T ss_dssp HHHHHHHHHHHHHHHHHTSTGGGHTGGGTEEEEEEESSSHHHHHHHHHHHTTCGGGSHTTHHHHHSTTHHHHHHHHHHTB
T ss_pred hhhhHHHHHhhhhcccccccccccccccceeeccccccccccccccccccccccccccccccCcccccccccchhhhcCC
Confidence 4778999999999999999985432 2445543 210 0 22 247789999999
Q ss_pred CCCcceEEecCccchhHHHHHHHHHHHHHcCCCCeEEEEEEc-cccC---------CCcc------CCCccchhhhcccc
Q 015082 127 RGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISME-NITL---------NWYF------GNDRSKLVSNCLFR 190 (413)
Q Consensus 127 ~~~~~~~~v~~~~C~~~~~al~~A~~~i~~g~~~~vLVv~~e-~~s~---------~~~~------~~d~~~~~~~~lfG 190 (413)
. .+++.+. .+|++++.||..|..+|++|.++.+||+++| ..+. .... +-|+.. ..+++|
T Consensus 166 ~--G~~~tv~-~acaSgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~~s~~~~~~pf~~~~--~G~v~g 240 (254)
T PF00109_consen 166 R--GPSYTVS-TACASGLAALEAAYRAIRSGEADVALVGGVDAPLSPFILAGFSALGALSADGPCRPFDPFA--DGFVLG 240 (254)
T ss_dssp ---SSEEEEE--GGGHHHHHHHHHHHHHHTTSSSEEEEEEEE--SSHHHHHHHHHTTBB-TTSGGGSTBTTB---SB-BB
T ss_pred C--Ccccccc-ccccccccccchhccccccccccccccccccccccccccccccccccccccccccccCCCC--CCEEEE
Confidence 6 6888899 7999999999999999999999999999999 3332 0001 112211 358999
Q ss_pred cCceEEEEecC
Q 015082 191 MGGAAILLSNR 201 (413)
Q Consensus 191 DGAaA~ll~~~ 201 (413)
+||+++||++.
T Consensus 241 EGa~~~vLe~~ 251 (254)
T PF00109_consen 241 EGAGALVLERL 251 (254)
T ss_dssp -EEEEEEEEEH
T ss_pred CceEEEEEEEh
Confidence 99999999864
No 117
>PRK08256 lipid-transfer protein; Provisional
Probab=98.85 E-value=1.1e-08 Score=103.16 Aligned_cols=90 Identities=14% Similarity=0.133 Sum_probs=76.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCeEEEEcc-CCCCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHHc
Q 015082 78 AEAVMFGAIDELFAKTSVKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQV 156 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~-~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~~ 156 (413)
..+|+.+|+++||+++|+++++||.+++++. ++.. . ...+...+|+. .+++++++ .+|++++.++..|.++|++
T Consensus 22 ~~~La~~A~~~Al~dAGl~~~dID~~~~g~~~~~~~-~--~~~~~~~lGl~-~~~~~~v~-~~caSg~~ai~~A~~~I~s 96 (391)
T PRK08256 22 YPDMAAEAGRAALADAGIDYDAVQQAYVGYVYGDST-S--GQRALYEVGMT-GIPIVNVN-NNCSTGSTALFLARQAVRS 96 (391)
T ss_pred HHHHHHHHHHHHHHHcCCChHHCCeeEEEEEeCCcc-h--hHHHHHHcCCC-CCCCcccc-cccHHHHHHHHHHHHHHHC
Confidence 4688899999999999999999999988754 3221 1 23467789997 57889999 7999999999999999999
Q ss_pred CCCCeEEEEEEccccC
Q 015082 157 HPNSYALVISMENITL 172 (413)
Q Consensus 157 g~~~~vLVv~~e~~s~ 172 (413)
|.+++|||+++|++|.
T Consensus 97 G~~d~vLv~g~e~~s~ 112 (391)
T PRK08256 97 GAADCALALGFEQMQP 112 (391)
T ss_pred CCCCEEEEEEEeeccc
Confidence 9999999999998763
No 118
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=98.81 E-value=1.8e-08 Score=101.19 Aligned_cols=94 Identities=11% Similarity=0.169 Sum_probs=77.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCeEEEEcc-C-CCCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHH
Q 015082 78 AEAVMFGAIDELFAKTSVKPKDIGILIVNCS-L-FNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQ 155 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~-~-~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~ 155 (413)
..+|+.+|++++|+++|++++|||.|++++. . ....+..+......+|++..++.+.++ ++|++++.++..|.+.|+
T Consensus 26 ~~~L~~~a~~~al~dagl~~~~ID~vv~g~~~~~~~~~~~~~~~~~l~~gl~~~~p~~~v~-~acaSg~~Av~~Aa~~I~ 104 (382)
T PRK07801 26 PADLGAHVLKGLVDRTGIDPAAVDDVIFGCVDTIGPQAGNIARTSWLAAGLPEEVPGVTVD-RQCGSSQQAIHFAAQAVM 104 (382)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEEeeccCCcccccHHHHHHHHcCCCCCCceeeec-chhhhHHHHHHHHHHHHH
Confidence 4689999999999999999999999999864 2 111233455544567886458889999 799999999999999999
Q ss_pred cCCCCeEEEEEEccccC
Q 015082 156 VHPNSYALVISMENITL 172 (413)
Q Consensus 156 ~g~~~~vLVv~~e~~s~ 172 (413)
+|.++.|||++.|++|.
T Consensus 105 sG~~d~vLv~G~e~ms~ 121 (382)
T PRK07801 105 SGTQDLVVAGGVQNMSQ 121 (382)
T ss_pred CCCCCEEEEcchhhhcC
Confidence 99999999999998764
No 119
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=98.68 E-value=1.5e-06 Score=104.13 Aligned_cols=216 Identities=14% Similarity=0.087 Sum_probs=129.9
Q ss_pred hHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHHcCCCCeEEEEEEccccC----------CC------ccCCC
Q 015082 116 LSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENITL----------NW------YFGND 179 (413)
Q Consensus 116 ~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~~g~~~~vLVv~~e~~s~----------~~------~~~~d 179 (413)
.+.+|...+|+. -+.+.|+ .+|+|++.||++|++.|++|.++.+||.+++.... .. .++-|
T Consensus 185 ~A~RIS~~f~L~--Gps~tVd-tACsSSL~Al~~A~~~L~~G~~D~alvGGv~~~~~p~~~~~fs~~~~lS~~g~crpFD 261 (2582)
T TIGR02813 185 ISGRIANRFDLG--GMNCVVD-AACAGSLAAIRMALSELLEGRSEMMITGGVCTDNSPFMYMSFSKTPAFTTNEDIQPFD 261 (2582)
T ss_pred HHHHHHHHhCCC--CCccccc-chhHHHHHHHHHHHHHHHcCCCCEEEEecceeeCCHHHHHHHHhccCcCCCCCccCCC
Confidence 478899999996 6889999 79999999999999999999999999999875221 00 11112
Q ss_pred ccchhhhcccccCceEEEEecCCCCcccccceEeeee-eeecCCCCccccccccccCCCCceeeEecchhhHHhHHhhhh
Q 015082 180 RSKLVSNCLFRMGGAAILLSNRFSDRRRSKYRLVHTV-RTHKGADDNCFACVTQEEDSEGKVGVTLSKNLMAVAGDALKT 258 (413)
Q Consensus 180 ~~~~~~~~lfGDGAaA~ll~~~~~~~~~~~~~i~~~~-~~~~~td~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~ 258 (413)
... .+++.|+|++++||.+-+..... +-.|...+ .+...+||... .++.| ...+
T Consensus 262 ~~a--dG~v~GEGag~vvLkrL~dA~~d-Gd~IyAvI~G~g~~~DG~~~-~itaP----------------~~~g----- 316 (2582)
T TIGR02813 262 IDS--KGMMIGEGIGMMALKRLEDAERD-GDRIYAVIKGVGASSDGKFK-SIYAP----------------RPEG----- 316 (2582)
T ss_pred CCC--CcccccceEEEEEeCcHHHHHhC-CCcEEEEEEEEEEcCCCCCC-CCcCC----------------CHHH-----
Confidence 111 25789999999999875542111 11222222 12223344311 11111 1111
Q ss_pred hhhhcCCCccchhHHHHHHHHHHHHHhhhhccCCCccchhccccEEEecCCChH-----HHHHHHHhcCCCc---ccchh
Q 015082 259 NITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDFKLAFEHFCIHAGGRA-----VLDELEKNLQLSD---WHMEP 330 (413)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~al~~~~~~~~~did~~i~hq~~~~-----~~~~i~~~lgi~~---e~~~~ 330 (413)
..++++.+++. .+..++||+++-.|.-+-. -.+.+.+.++-.. ..+.
T Consensus 317 -----------------------q~~~i~~Al~~-Agi~p~~I~yIeaHGTGT~~gD~~E~~Al~~vf~~~~~~~~~~~- 371 (2582)
T TIGR02813 317 -----------------------QAKALKRAYDD-AGFAPHTCGLIEAHGTGTAAGDVAEFGGLVSVFSQDNDQKQHIA- 371 (2582)
T ss_pred -----------------------HHHHHHHHHHH-cCCCHHHCCEEEecCCCCCCCCHHHHHHHHHHhcccccCCCCce-
Confidence 01233444433 3344789999999986543 3455666676432 1121
Q ss_pred hHHHHhhhcCCCcchHHHHHHH---HHHcCCCCC--------------------------------C--CeEEEEeeccc
Q 015082 331 SRMTLYRFGNTSSSSLWYELAY---SEAKGRIKK--------------------------------G--DRTWQIAFGSG 373 (413)
Q Consensus 331 s~~~l~~~Gn~~sasi~i~L~~---~~~~g~l~~--------------------------------G--d~vll~~~G~G 373 (413)
--.+=..+||+.+|+=...|.. +++++.+.+ | .+.++-+||.|
T Consensus 372 vgSvKs~iGH~~~AAG~a~lik~~lal~~~~iPp~~~~~~pnp~~~~~~~~~~v~~~~~pw~~~~~~~~r~a~vnsfGfG 451 (2582)
T TIGR02813 372 LGSVKSQIGHTKSTAGTAGMIKAVLALHHKVLPPTINVDQPNPKLDIENSPFYLNTETRPWMQREDGTPRRAGISSFGFG 451 (2582)
T ss_pred eeccccccccchHhHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccccceeecCCcccCcccCCCCccEEEEeCccCC
Confidence 0233457899999987777754 333332211 1 34677889988
Q ss_pred hhhhhhhhhhc
Q 015082 374 FKCNSAVWKAL 384 (413)
Q Consensus 374 ~~~~a~llr~~ 384 (413)
-+-..++|+-.
T Consensus 452 GtN~hvvlee~ 462 (2582)
T TIGR02813 452 GTNFHMVLEEY 462 (2582)
T ss_pred CeeEEEEEeec
Confidence 77778888754
No 120
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=98.58 E-value=3.4e-07 Score=94.87 Aligned_cols=93 Identities=13% Similarity=0.011 Sum_probs=77.1
Q ss_pred HHHHHHHHHHHHHHhCCCC--CCCcCeEEEEccCCCCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHH
Q 015082 78 AEAVMFGAIDELFAKTSVK--PKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQ 155 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~--~~~Id~li~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~ 155 (413)
..+|+.+|+++||+++|++ +++||.+++++............++++||+.+ .+..... .||.++..++..|+..|+
T Consensus 27 ~~~L~~eA~~~Al~DAGl~~~~~dID~v~v~~~~~~~~~~~~~~la~~lGl~p-~~~~~~~-~GG~s~~~~v~~Aa~~Ia 104 (498)
T PRK08257 27 PVDLMAAAARAAAADAGADAVLEAIDSVAVVNQLSWRYRDPPGLLAERLGADP-ARTVYSP-VGGNSPQRLVNEAALRIA 104 (498)
T ss_pred HHHHHHHHHHHHHHhcCCCcCHHHCCEEEEeccccccccCHHHHHHHHcCCCC-cceeEec-CCCHHHHHHHHHHHHHHH
Confidence 4689999999999999999 99999999875321112334688999999974 5556666 689899999999999999
Q ss_pred cCCCCeEEEEEEccccC
Q 015082 156 VHPNSYALVISMENITL 172 (413)
Q Consensus 156 ~g~~~~vLVv~~e~~s~ 172 (413)
+|.++.|||+++|+++.
T Consensus 105 sG~advVLv~G~E~~~~ 121 (498)
T PRK08257 105 AGEADVALVAGAEAQST 121 (498)
T ss_pred CCCCCEEEEeeeeeccc
Confidence 99999999999998653
No 121
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=98.56 E-value=2.5e-07 Score=92.97 Aligned_cols=89 Identities=12% Similarity=0.006 Sum_probs=74.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCeEEEEccCCCCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHHcC
Q 015082 78 AEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVH 157 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~~g 157 (413)
..+|+.+|+++||+++|++++|||.++..+... +.....+++.||+. ..+...+. .+|+++..++..|...|++|
T Consensus 25 ~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~~---~~~~~~~~~~lGl~-~~~~~~v~-~gg~s~~~a~~~A~~~I~sG 99 (388)
T PRK08142 25 VAQLHAEVAKGALADAGLSLADVDGYFCAGDAP---GLGPASMVDYLGLK-LRHVDSTE-TGGSSYLAHVGHAAQAIAAG 99 (388)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCC---CccHHHHHHhCCCC-Ceeecccc-CCcHHHHHHHHHHHHHHHcC
Confidence 368899999999999999999999976532211 11124588999997 47888899 79999999999999999999
Q ss_pred CCCeEEEEEEcccc
Q 015082 158 PNSYALVISMENIT 171 (413)
Q Consensus 158 ~~~~vLVv~~e~~s 171 (413)
.+++|||++.|+++
T Consensus 100 ~~d~vLvvg~e~~~ 113 (388)
T PRK08142 100 KCSVALITLAGRPR 113 (388)
T ss_pred CCCEEEEEeeeecc
Confidence 99999999999743
No 122
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.52 E-value=5.2e-06 Score=83.59 Aligned_cols=126 Identities=13% Similarity=0.121 Sum_probs=89.9
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCC-CCCcC--e-EEEEcc-C--C-C-----------------------CCC-ChHHHHH
Q 015082 74 ARKEAEAVMFGAIDELFAKTSVK-PKDIG--I-LIVNCS-L--F-N-----------------------PTP-SLSAMVI 121 (413)
Q Consensus 74 ~~~~~~~la~~Aa~~aL~~ag~~-~~~Id--~-li~~s~-~--~-~-----------------------~~p-~~a~~v~ 121 (413)
+......|+..|+++||+++|++ ..+.+ . +++++. . . . .++ ..+..++
T Consensus 67 ~~d~~~~~a~~Aa~eAl~dAgl~~~~~~~~r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~vs 146 (412)
T COG0304 67 FMDRFSQLAVVAAVEALEDAGLDNELNVDMRVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLAAGNVA 146 (412)
T ss_pred cccHHHHHHHHHHHHHHHHcCCCcccccCccEEEEEeccCCCcchhhhHHHHHHhcCCccCcCchhhhhhccchHHHHHH
Confidence 34457889999999999999998 34443 2 233332 1 1 0 011 2467788
Q ss_pred HHcCCCCCcceEEecCccchhHHHHHHHHHHHHHcCCCCeEEEEEEcc---------------ccCC------CccCCCc
Q 015082 122 NHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMEN---------------ITLN------WYFGNDR 180 (413)
Q Consensus 122 ~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~~g~~~~vLVv~~e~---------------~s~~------~~~~~d~ 180 (413)
..+|+. -+.+.+. .+|+++.+|+..|.++|+.|..+.+++.++|. +|.. ..++-|+
T Consensus 147 ~~~g~~--G~~~~~~-tACatg~~AIg~A~~~I~~G~ad~~iaGG~e~~i~~~~i~gF~am~Alst~nd~p~~asrPfd~ 223 (412)
T COG0304 147 IVFGLK--GPNYTPV-TACATGAHAIGDAVRLIRLGKADVVIAGGAEAAITPLGIAGFEAMRALSTRNDDPEKASRPFDK 223 (412)
T ss_pred HHhCCC--CCcCChh-hhHHhHHHHHHHHHHHHHcCCCCEEEEcccccccCHHHHHHHHHHHHhccCCCCccccCCCCCC
Confidence 889996 5788889 69999999999999999999999999999976 2221 1112222
Q ss_pred cchhhhcccccCceEEEEecCCCC
Q 015082 181 SKLVSNCLFRMGGAAILLSNRFSD 204 (413)
Q Consensus 181 ~~~~~~~lfGDGAaA~ll~~~~~~ 204 (413)
+. ..+++|.||+++||+.-+..
T Consensus 224 ~R--dGfv~gEGag~lVLE~~ehA 245 (412)
T COG0304 224 NR--DGFVIGEGAGALVLEELEHA 245 (412)
T ss_pred CC--CCEEEecceeEEEecChhhH
Confidence 11 25789999999999987653
No 123
>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.45 E-value=1.9e-05 Score=88.74 Aligned_cols=291 Identities=12% Similarity=0.092 Sum_probs=168.3
Q ss_pred EEEEeeeeecCCCCccccHHHHHHHHHhcC----CCChhhHHHHHHHHHHcCC-----Ccee------ecCC-cccC---
Q 015082 4 GSISNFSCYKPEESRKCTKRIFMDQSRMTG----TFTEENLQFQKKILERSGL-----GDST------YLPE-AVLN--- 64 (413)
Q Consensus 4 v~I~~ig~~lP~~~~~v~~~el~~~~~~~~----~~~~~~~~~~~~i~~~~GI-----~~R~------~~~~-~~~~--- 64 (413)
|-|.|+++.+|+ .-+.+++++.+..-. .++.++ |=.+..+- ..+. |+.+ +.+.
T Consensus 6 IAIiGm~~rfPg---a~~~~~~W~~l~~g~~~i~~ip~~r-----wd~~~~~~~~~~~~gk~~~~~ggfl~~~~~FD~~f 77 (1061)
T COG3321 6 IAIIGMACRFPG---ADSPEEFWDLLKEGRDEITEVPADR-----WDVDAYYDPDPTVPGKSYSRWGGFLDDVDDFDALF 77 (1061)
T ss_pred EEEEeccccCCC---CCCHHHHHHHHhcCCceeeecChhh-----hhHhhccCCccccccccccccccccCCccccCHHH
Confidence 789999999999 688999999886422 122221 11122221 1111 1111 1110
Q ss_pred CCCCccHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcC----eEEEEcc-CCCCCC-------------------ChHHHH
Q 015082 65 IPPNPSMKEARKEAEAVMFGAIDELFAKTSVKPKDIG----ILIVNCS-LFNPTP-------------------SLSAMV 120 (413)
Q Consensus 65 ~~~~~~ma~~~~~~~~la~~Aa~~aL~~ag~~~~~Id----~li~~s~-~~~~~p-------------------~~a~~v 120 (413)
..-..+.++..+--..|..+.+-+||+++|+.++.+. .|+.+.+ .+|... ..+.+|
T Consensus 78 FgisPrEA~~mDPQqRllLe~aw~AlEdAG~~~~~l~g~~tgV~~g~~~~~y~~~~~~~~~~~~~~~~~g~~~~~~a~Ri 157 (1061)
T COG3321 78 FGISPREAEAMDPQQRLLLEVAWEALEDAGIYPDSLRGSATGVFAGASVADYLLLLLADDEAEPEYAITGNSSSVAAGRI 157 (1061)
T ss_pred cCCCHHHHHhcCchHhHHHHHHHHHHHHcCCCccccCCcceEEEEeeccCccccccccccccccceecccchhhHHHHHH
Confidence 0001223334444666999999999999999999888 4565543 333221 257899
Q ss_pred HHHcCCCCCcceEEecCccchhHHHHHHHHHHHHHcCCCCeEEEEEEccccC--CCc--------cCCCc----cchhhh
Q 015082 121 INHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENITL--NWY--------FGNDR----SKLVSN 186 (413)
Q Consensus 121 ~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~~g~~~~vLVv~~e~~s~--~~~--------~~~d~----~~~~~~ 186 (413)
+..|+++ .+.+.|+ .+|++.+.|+++|++.|++|.++.+|+.+....-. .++ .++.+ +.-...
T Consensus 158 sy~l~l~--GPs~~vd-taCSSsLvAvhlA~~sL~~Ge~d~alaGgv~l~~~p~~~~~~~~~g~ls~~g~c~~fd~~adG 234 (1061)
T COG3321 158 SYVLGLS--GPSVTVD-TACSSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESSYLFSAGGMLSPDGRCKAFDADADG 234 (1061)
T ss_pred HHHhcCC--CCCcccc-chhhHHHHHHHHHHHHHHcCCCCEEEecceEeccCCcceeeeecccCcCCCCcceecccCCCC
Confidence 9999996 6899999 79999999999999999999999999988865421 000 11111 001135
Q ss_pred cccccCceEEEEecCCCCcccccceEeeeeee-ecCCCCccccccccccCCCCceeeEecchhhHHhHHhhhhhhhhcCC
Q 015082 187 CLFRMGGAAILLSNRFSDRRRSKYRLVHTVRT-HKGADDNCFACVTQEEDSEGKVGVTLSKNLMAVAGDALKTNITTLGP 265 (413)
Q Consensus 187 ~lfGDGAaA~ll~~~~~~~~~~~~~i~~~~~~-~~~td~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~ 265 (413)
++.|.|+++++|.+-..... .+-.|..++.. -...||... .++.| ...+
T Consensus 235 ~v~geG~g~vvLKrl~~A~~-dgd~IyavI~gsavn~dG~~~-gltaP----------------~~~a------------ 284 (1061)
T COG3321 235 YVRGEGAGVVVLKRLSDAER-DGDRIYAVIRGSAVNQDGRSN-GLTAP----------------NLEA------------ 284 (1061)
T ss_pred EEEeeeEEEEEEEEhHHHHh-CCCeEEEEEEeeeeccCCCcC-CCCCC----------------CHHH------------
Confidence 78999999999987543211 12223333322 223344322 22221 1100
Q ss_pred CccchhHHHHHHHHHHHHHhhhhccCCCccchhccccEEEecCCChHH-----HHHHHHhcCCCc-ccchhhHHHHhhhc
Q 015082 266 LVLPMSEQLLFFATLVGKKLFKMKIKPYIPDFKLAFEHFCIHAGGRAV-----LDELEKNLQLSD-WHMEPSRMTLYRFG 339 (413)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~v~~~al~~~~~~~~~did~~i~hq~~~~~-----~~~i~~~lgi~~-e~~~~s~~~l~~~G 339 (413)
..++++.++.. .+..+++|+++=.|.-+..+ +..+.+.++-.. +....--.+-.+.|
T Consensus 285 ----------------Q~~v~~~al~~-a~i~p~tv~yvEaHgTGT~lGDpiE~~aL~~v~~~~~~~~~c~iGSvKsNiG 347 (1061)
T COG3321 285 ----------------QADVIREALAD-AGIDPATVQYVEAHGTGTPLGDPIEANALGAVYGEGAPAQPCAIGSVKSNIG 347 (1061)
T ss_pred ----------------HHHHHHHHHHh-cCCCcccCcEEEecCCCCCCcCHHHHHHHHHHhccCCCCCcccccccccccc
Confidence 12344444433 33346899988899865443 344445554322 22211133445788
Q ss_pred CCCcchHHHHHHH
Q 015082 340 NTSSSSLWYELAY 352 (413)
Q Consensus 340 n~~sasi~i~L~~ 352 (413)
|+.+|.=...|-.
T Consensus 348 H~~~AaGiagliK 360 (1061)
T COG3321 348 HLEAAAGIAGLIK 360 (1061)
T ss_pred cHHHHHHHHHHHH
Confidence 8888776666644
No 124
>KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=98.44 E-value=4.5e-07 Score=85.56 Aligned_cols=94 Identities=17% Similarity=0.157 Sum_probs=86.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCeEEEEcc-CCCCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHHc
Q 015082 78 AEAVMFGAIDELFAKTSVKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQV 156 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~-~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~~ 156 (413)
+.+|+..|++.+|+|++++++|++.||+++. +....-..+++.+--.||+.++++..++ ..|++++.|+.+|++-|+.
T Consensus 30 A~~Lgsvaikaalera~v~~~~v~eVi~GnVl~AnlGQapaRQaalgAGlp~sv~~tTvN-kvCaSgmKAv~laaQsI~~ 108 (396)
T KOG1390|consen 30 ATELGSVAIKAALERAVVPPSDVAEVIFGNVLSANLGQAPARQAALGAGLPYSVPATTVN-KVCASGMKAVILAAQSIQT 108 (396)
T ss_pred hhhHHHHHHHHHHHhcCCCHHHhhhhhhccccccccCcchHHHHHhhcCCCcceeeEeeh-hhhhhhHHHHHHHHHHHhc
Confidence 7899999999999999999999999999964 4444556788998889999899999999 8999999999999999999
Q ss_pred CCCCeEEEEEEccccC
Q 015082 157 HPNSYALVISMENITL 172 (413)
Q Consensus 157 g~~~~vLVv~~e~~s~ 172 (413)
|..+.|+..+.|.||.
T Consensus 109 G~~divVaGGmEsMS~ 124 (396)
T KOG1390|consen 109 GHADIVVAGGMESMSN 124 (396)
T ss_pred CCccEEEecccchhcc
Confidence 9999999999999996
No 125
>PRK07855 lipid-transfer protein; Provisional
Probab=98.44 E-value=1e-06 Score=88.59 Aligned_cols=85 Identities=11% Similarity=0.072 Sum_probs=71.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCeEEEEccCCCCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHHcC
Q 015082 78 AEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVH 157 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~~g 157 (413)
..+|+.+|+++||+++|++++|||.+++.+.. ..+ ...+++.||+.+..+...+. ++|+++..++..|...|++|
T Consensus 24 ~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~--~~~--~~~l~~~lGl~~~~~~~~v~-~gg~sg~~~~~~A~~~I~sG 98 (386)
T PRK07855 24 ELRLACEAVLAALDDAGLAPSDVDGLVTFTMD--TNP--EIAVARALGIGELKFFSRIH-YGGGAACATVQQAAMAVATG 98 (386)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecCc--ccc--HHHHHHHCCCCCCcceeeec-CCcHHHHHHHHHHHHHHHCC
Confidence 46888999999999999999999999864431 112 25688999997425667889 79999999999999999999
Q ss_pred CCCeEEEEEE
Q 015082 158 PNSYALVISM 167 (413)
Q Consensus 158 ~~~~vLVv~~ 167 (413)
.+++|||++.
T Consensus 99 ~~d~vLv~g~ 108 (386)
T PRK07855 99 VADVVVCYRA 108 (386)
T ss_pred CCCEEEEEee
Confidence 9999999987
No 126
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.
Probab=98.41 E-value=2.3e-06 Score=80.88 Aligned_cols=121 Identities=21% Similarity=0.200 Sum_probs=79.0
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCcCeEEEEccCCCCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHH
Q 015082 75 RKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLL 154 (413)
Q Consensus 75 ~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i 154 (413)
++.-..|..+|++.+|++++++++|||.++-+---... ..+.+.++.|++ |.+.+. .+|+++..+|.+|+.++
T Consensus 48 EkAE~~m~~~A~~~al~Ka~l~~~dId~~~aGDLlnQ~--i~s~f~ar~l~i----Pf~Gly-gACST~~e~l~laa~~v 120 (329)
T PF07451_consen 48 EKAESKMQKEAVELALKKAGLKKEDIDYLFAGDLLNQI--ISSSFAARDLGI----PFLGLY-GACSTMMESLALAAMLV 120 (329)
T ss_dssp HHHHHHHHHHHHHHHHHHTT--GGG-SEEEEEETTCCC--CHHHHHHHHHT------EEEB---CCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCeEEEehhhhhhh--HHHHHHHHhcCC----Cccchh-hHHHHHHHHHHHHHHHH
Confidence 34456788999999999999999999999887543222 346788888876 578999 59999999999999999
Q ss_pred HcCCCCeEEEEEEccccC---CCccC----CCccchhhhcccccCceEEEEecCCCC
Q 015082 155 QVHPNSYALVISMENITL---NWYFG----NDRSKLVSNCLFRMGGAAILLSNRFSD 204 (413)
Q Consensus 155 ~~g~~~~vLVv~~e~~s~---~~~~~----~d~~~~~~~~lfGDGAaA~ll~~~~~~ 204 (413)
.+|-+++||+.++.+... .|.-| ..|.. ....--=||+|+||++.+..
T Consensus 121 dgg~a~~vla~tSSH~~tAERQfR~P~EyG~Qrp~--tAqwTVTGaGa~il~~~~~~ 175 (329)
T PF07451_consen 121 DGGFADYVLAATSSHFATAERQFRFPTEYGGQRPP--TAQWTVTGAGAAILSKEGSG 175 (329)
T ss_dssp HTTS-SEEEEEEEE-CCHHHHHT---GGGT----T--T--EE--EEEEEEEESS--S
T ss_pred hCCCcceEEEEeccccchhhhhccCchhccCCCCC--cccEEEeceEEEEEecCCCC
Confidence 999999999999877553 22111 11210 11222348999999987653
No 127
>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism]
Probab=98.37 E-value=1.5e-06 Score=87.55 Aligned_cols=94 Identities=19% Similarity=0.281 Sum_probs=78.3
Q ss_pred HHHHHHHHHHHHHHhC--CCCCCCcCeEEEEcc-C-CCCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHH
Q 015082 78 AEAVMFGAIDELFAKT--SVKPKDIGILIVNCS-L-FNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNL 153 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~a--g~~~~~Id~li~~s~-~-~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~ 153 (413)
+.++.....+..+++. ++++.+||.++++|. + .......+..++..+|++.+++.+.|+ .+|++++.|+..|+..
T Consensus 27 ~e~l~~a~~~a~~~~~~~~vd~~~v~~~~~G~~~~~g~~~~~~ar~~a~~aGl~~~~p~~~V~-~~c~SG~~Av~~A~~~ 105 (392)
T COG0183 27 AEALGAALIDAGLERAPADVDAADVDDVILGCVLQAGEQGQNIARQAALAAGLPGSVPAVTVN-RACASGLAAVRLAAQA 105 (392)
T ss_pred HHHHHHHHHHHHhhhccccCCHHHhhhheeccccccccccccHHHHHHHHcCCCCCCCceEEe-ccchhHHHHHHHHHHH
Confidence 3455555556555433 577778999999864 3 335678899999999999669999999 7999999999999999
Q ss_pred HHcCCCCeEEEEEEccccC
Q 015082 154 LQVHPNSYALVISMENITL 172 (413)
Q Consensus 154 i~~g~~~~vLVv~~e~~s~ 172 (413)
|++|.++.||+++.|++|.
T Consensus 106 I~sG~~dvvlagG~E~mS~ 124 (392)
T COG0183 106 IASGEADVVLAGGVEKMSD 124 (392)
T ss_pred HHCCCCCEEEEEeeeeccC
Confidence 9999999999999999997
No 128
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=98.30 E-value=4.8e-06 Score=83.58 Aligned_cols=89 Identities=12% Similarity=0.126 Sum_probs=68.3
Q ss_pred HHHHHHHHHHHHHHhCC-CCC-CCcCeEEEEccCCC-CCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHH
Q 015082 78 AEAVMFGAIDELFAKTS-VKP-KDIGILIVNCSLFN-PTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLL 154 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~ag-~~~-~~Id~li~~s~~~~-~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i 154 (413)
..+|+.+|+++||+++| +++ +|||.+++++.... ........+++.+|+. ..+.+.+ |+++..++..|...|
T Consensus 25 ~~eL~~eA~~~Al~DAG~l~~~~dId~~~~~~~~~~~~~~~~~~~~~~~lg~~-~~~~~~v----~~sg~~a~~~A~~aV 99 (385)
T PRK06066 25 FREMMFEAASRAYKDAGNINPRRDVDSFISCQEDFWEGIAIADEFAPDQIGGA-MRPTMTV----AGDGLQGLAHAVMHI 99 (385)
T ss_pred HHHHHHHHHHHHHHhcCCCCChhcCCEEEEecCcccCcccccchhHHHHcccC-CCCeEEE----eCcHHHHHHHHHHHH
Confidence 46888999999999999 997 79999987642111 0112234577889985 2454444 778899999999999
Q ss_pred HcCCCCeEEEEEEcccc
Q 015082 155 QVHPNSYALVISMENIT 171 (413)
Q Consensus 155 ~~g~~~~vLVv~~e~~s 171 (413)
++|.+++|||++.|+++
T Consensus 100 ~sG~~d~vLv~g~~~~~ 116 (385)
T PRK06066 100 NSGLANVVVVEAHSKPS 116 (385)
T ss_pred HcCCCCEEEEEEEeecc
Confidence 99999999999999753
No 129
>PRK07937 lipid-transfer protein; Provisional
Probab=98.08 E-value=2e-05 Score=78.29 Aligned_cols=88 Identities=16% Similarity=0.061 Sum_probs=65.2
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCeEEEEccCCCCCC--ChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHHc
Q 015082 79 EAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTP--SLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQV 156 (413)
Q Consensus 79 ~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p--~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~~ 156 (413)
.+|+.+|+++||+++|++++|||.++.++. +.... .....+...+|+.+..+...+. +++..++..|...|++
T Consensus 25 ~el~~eA~~~Al~DAgl~~~dID~~~~~~~-~~~~~~~~~~~~~~~~~G~~~~~~~~~v~----~~g~~a~~~A~~aI~s 99 (352)
T PRK07937 25 VEMLMPCFAELYAELGITKSDIGFWCSGSS-DYLAGRAFSFISAIDSIGAVPPINESHVE----MDAAWALYEAWVKLLT 99 (352)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEcc-ccccccccchhhHHhhccCCCCCceEEec----CcHHHHHHHHHHHHhc
Confidence 478899999999999999999998864433 21111 1123455678885334444444 3577799999999999
Q ss_pred CCCCeEEEEEEcccc
Q 015082 157 HPNSYALVISMENIT 171 (413)
Q Consensus 157 g~~~~vLVv~~e~~s 171 (413)
|.+++|||++.|+++
T Consensus 100 G~~d~VLv~g~~k~~ 114 (352)
T PRK07937 100 GEVDTALVYGFGKSS 114 (352)
T ss_pred CCCCEEEEEEecccC
Confidence 999999999999754
No 130
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]
Probab=97.97 E-value=8.9e-06 Score=75.08 Aligned_cols=89 Identities=16% Similarity=0.233 Sum_probs=74.3
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCeEEEEcc-CCCCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHHcC
Q 015082 79 EAVMFGAIDELFAKTSVKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVH 157 (413)
Q Consensus 79 ~~la~~Aa~~aL~~ag~~~~~Id~li~~s~-~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~~g 157 (413)
.|++.+|+.++|+++++..++|+.-+++-. .+ .....+...++|+. ..+.+.|+ +.|+++-++|-+|.++|++|
T Consensus 30 pd~a~ea~tkal~da~ikys~vqqa~vgyvfgd---stcgqraiyevgmt-gipi~nvn-nncatgssalflakqiiesg 104 (408)
T KOG1406|consen 30 PDFAKEAITKALQDAGIKYSEVQQAVVGYVFGD---STCGQRAIYEVGMT-GIPIYNVN-NNCATGSSALFLAKQIIESG 104 (408)
T ss_pred chHHHHHHHHHHHhcCCCHHHHHhhhheeeecC---CccchHHHHhcccc-Ccceeecc-CccccCchHHHHHHHHHhcC
Confidence 366799999999999999999886554432 12 12335555689998 69999999 79999999999999999999
Q ss_pred CCCeEEEEEEccccC
Q 015082 158 PNSYALVISMENITL 172 (413)
Q Consensus 158 ~~~~vLVv~~e~~s~ 172 (413)
..+.||..+-|++++
T Consensus 105 n~dcvlalgfekm~~ 119 (408)
T KOG1406|consen 105 NSDCVLALGFEKMER 119 (408)
T ss_pred CcceEEeechhhhCC
Confidence 999999999999876
No 131
>KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=97.96 E-value=1.4e-05 Score=73.61 Aligned_cols=94 Identities=15% Similarity=0.080 Sum_probs=79.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCeEEEEcc--CCCCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHH
Q 015082 78 AEAVMFGAIDELFAKTSVKPKDIGILIVNCS--LFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQ 155 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~--~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~ 155 (413)
+.||.+-|++.+|+.+++.++.+|.||++.. .....-.+++.+--+.|++.+++++.++ .=|.++++++..+++-|.
T Consensus 28 aTdL~~~AakAAL~aa~v~~e~VD~VI~GNV~aSSsDgIYl~RHvGL~~GvP~e~pALtiN-RLCGSGFQsiVNgaQ~I~ 106 (396)
T KOG1391|consen 28 ATDLGVVAAKAALKAANVGAEAVDHVIMGNVLASSSDGIYLARHVGLRVGVPKETPALTIN-RLCGSGFQSIVNGAQEIC 106 (396)
T ss_pred hhhHHHHHHHHHHhhcCCChhhcceEEEeeeeeccCCceEeeeccccccCCcCccCceeeh-hhhcccHHHHHhhHHHhh
Confidence 5688899999999999999999999998843 1111123456666677888899999999 899999999999999999
Q ss_pred cCCCCeEEEEEEccccC
Q 015082 156 VHPNSYALVISMENITL 172 (413)
Q Consensus 156 ~g~~~~vLVv~~e~~s~ 172 (413)
-|..+.||.-+.|+||.
T Consensus 107 vgea~ivL~GGtEnMSq 123 (396)
T KOG1391|consen 107 VGEAEIVLCGGTENMSQ 123 (396)
T ss_pred cCcceEEEecCcccccc
Confidence 99999999999999996
No 132
>KOG1392 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=97.62 E-value=4.3e-05 Score=71.42 Aligned_cols=94 Identities=11% Similarity=0.118 Sum_probs=85.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCeEEEEcc-CCCCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHHc
Q 015082 78 AEAVMFGAIDELFAKTSVKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQV 156 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~-~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~~ 156 (413)
+.||+.+|.+.+|++..++.+.||.||+++. .+.-..++|++.+-..|++..+++..+. ++|.+.-.|+-....+|++
T Consensus 66 phdlar~al~~ll~kt~lpke~~dyii~gtviqevktsniareaal~agfsdktpahtvt-macissn~amttgmgliat 144 (465)
T KOG1392|consen 66 PHDLAREALKALLEKTKLPKEQLDYIICGTVIQEVKTSNIAREAALLAGFSDKTPAHTVT-MACISSNVAMTTGMGLIAT 144 (465)
T ss_pred hhHHHHHHHHHHHHhccCCHHHhceeeehhhHHHHhcchHHHHHHHhcCCCCCCccceee-eehhccchhhhccceeEee
Confidence 6899999999999999999999999999985 4555667899999999999889999999 8999999999999999999
Q ss_pred CCCCeEEEEEEccccC
Q 015082 157 HPNSYALVISMENITL 172 (413)
Q Consensus 157 g~~~~vLVv~~e~~s~ 172 (413)
|.++.++..+.|.+|.
T Consensus 145 g~~dvivaggvelmsd 160 (465)
T KOG1392|consen 145 GNADVIVAGGVELMSD 160 (465)
T ss_pred CCcCEEEEcceeeccc
Confidence 9999999999999886
No 133
>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism]
Probab=97.39 E-value=0.0003 Score=66.66 Aligned_cols=94 Identities=15% Similarity=0.210 Sum_probs=80.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCeEEEEcc--CCCCCCChHHHH-HHHcCCCCCcceEEecCccchhHHHHHHHHHHHH
Q 015082 78 AEAVMFGAIDELFAKTSVKPKDIGILIVNCS--LFNPTPSLSAMV-INHYKLRGNIISYNLGGMGCSAGLISIDLANNLL 154 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~--~~~~~p~~a~~v-~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i 154 (413)
..+|...+.+..+++.+++|+.|+.|++++. |.. ....+++ +-..|++..++...++ ..|+++++|+...+.-|
T Consensus 61 pDeLl~~vl~a~ie~t~~dp~~igdi~vG~vL~pg~--ga~e~R~a~~~ag~P~tvpv~tvN-RqCsSGLqaVadiA~~I 137 (435)
T KOG1389|consen 61 PDELLAAVLRAVIEKTNLDPSLIGDIVVGTVLAPGS--GASECRMAAFYAGFPETVPVRTVN-RQCSSGLQAVADIAAKI 137 (435)
T ss_pred hHHHHHHHHHHHHhhcCCCHHHhcceeeeeccCCCc--chHHHHHHHHHcCCCcccchhhhh-hhhhhHHHHHHHHHHHH
Confidence 4678899999999999999999999999974 432 2444444 4567999889999999 89999999999999999
Q ss_pred HcCCCCeEEEEEEccccCCC
Q 015082 155 QVHPNSYALVISMENITLNW 174 (413)
Q Consensus 155 ~~g~~~~vLVv~~e~~s~~~ 174 (413)
++|.++..|-.+.|.|+.++
T Consensus 138 r~G~ydIGla~GvESMt~~~ 157 (435)
T KOG1389|consen 138 RAGFYDIGLAAGVESMTTNY 157 (435)
T ss_pred hcCceeeecccchhhhcccC
Confidence 99999999999999999853
No 134
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=97.33 E-value=0.00019 Score=72.47 Aligned_cols=73 Identities=21% Similarity=0.144 Sum_probs=54.5
Q ss_pred hhccccEEEecCCChHHHHHHHHhcCCCcccchhhHH---HHhhhcCCCcchHHHHHHHHHHcCCCCCCCeEEEEeec
Q 015082 297 FKLAFEHFCIHAGGRAVLDELEKNLQLSDWHMEPSRM---TLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFG 371 (413)
Q Consensus 297 ~~~did~~i~hq~~~~~~~~i~~~lgi~~e~~~~s~~---~l~~~Gn~~sasi~i~L~~~~~~g~l~~Gd~vll~~~G 371 (413)
..+|||+|-+|+........+.+.+|++.+++..+-. ...-+|++|+..+...+.++.+++ .+.| .+.+++.|
T Consensus 331 ~~~DID~~ei~eaFa~~~l~~~~~lg~~~~~vN~~GG~ia~GHp~GaTGa~~v~~ll~qL~~~g-~~~G-l~~~c~~G 406 (417)
T PRK06025 331 TKDDIDLWEINEAFAVVAEKFIRDLDLDRDKVNVNGGAIALGHPIGATGSILIGTVLDELERRG-LKRG-LVTMCAAG 406 (417)
T ss_pred CHHHCcEEEEchHHHHHHHHHHHHcCCChhhccccCCHHhcCCchhHHHHHHHHHHHHHHHHhC-CCeE-EEEEEeec
Confidence 4789999999999998888999999999888732111 112578888888888888887766 5677 55555554
No 135
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.26 E-value=0.00098 Score=64.44 Aligned_cols=123 Identities=14% Similarity=0.131 Sum_probs=86.9
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCC---CcC----eEEEEcc-CC---------------------CCCC-----ChHHHHH
Q 015082 76 KEAEAVMFGAIDELFAKTSVKPK---DIG----ILIVNCS-LF---------------------NPTP-----SLSAMVI 121 (413)
Q Consensus 76 ~~~~~la~~Aa~~aL~~ag~~~~---~Id----~li~~s~-~~---------------------~~~p-----~~a~~v~ 121 (413)
.....++..|+++||+++++.+. +.| .|.+++. .+ +..| -.+.+|.
T Consensus 92 s~~~~~al~aa~eAL~da~~~~~~~~e~dk~~~GV~iGtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~NM~ag~vs 171 (440)
T KOG1394|consen 92 SKFTKLALTAAEEALKDAGLLDVNLSEEDKEKTGVLIGTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILTNMAAGYVS 171 (440)
T ss_pred hHHHHHHHHHHHHHHHhcCCCCcccchhhhhhhceEeccccccHHHHHHHHHHHHHhcccccCccccchhhcccccchhh
Confidence 34788999999999999998765 222 2333322 10 1223 1367888
Q ss_pred HHcCCCCCcceEEecCccchhHHHHHHHHHHHHHcCCCCeEEEEEEccccC-----CC-------c---cC------CCc
Q 015082 122 NHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENITL-----NW-------Y---FG------NDR 180 (413)
Q Consensus 122 ~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~~g~~~~vLVv~~e~~s~-----~~-------~---~~------~d~ 180 (413)
.++|+. .+...+. .+|+++.+++-.|.++|+.|..+..|..++|.+-. .| . ++ -|.
T Consensus 172 m~~gl~--GpnhsvS-TACATg~h~igda~n~Ir~GdaDvmlAGgsE~~I~PlslaGF~r~RALSt~nd~P~~aSRPfD~ 248 (440)
T KOG1394|consen 172 MKYGLR--GPNHSVS-TACATGNHCIGDAFNFIRLGDADVMLAGGSEACINPLSLAGFSRARALSTRNDNPQKASRPFDK 248 (440)
T ss_pred hhhcCc--CCchhhH-hhhhhccchHHHHHHHHHhCccceeeccCcceeecchhhhhHHHHHHhhhcCCCccccCCCCcc
Confidence 899996 6888899 79999999999999999999999999888886322 01 0 11 111
Q ss_pred cchhhhcccccCceEEEEecCCC
Q 015082 181 SKLVSNCLFRMGGAAILLSNRFS 203 (413)
Q Consensus 181 ~~~~~~~lfGDGAaA~ll~~~~~ 203 (413)
.. ..+++|.||+.+||+.-+.
T Consensus 249 ~R--dGFVmGEGagvlvlEelEH 269 (440)
T KOG1394|consen 249 KR--DGFVMGEGAGVLVLEELEH 269 (440)
T ss_pred CC--CceeeccceeEEehHhHHH
Confidence 11 2478999999999987554
No 136
>PF08540 HMG_CoA_synt_C: Hydroxymethylglutaryl-coenzyme A synthase C terminal; InterPro: IPR013746 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the C-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1TXT_D 1TVZ_A 1X9E_B 2HDB_B 3V4X_A 3V4N_C 2P8U_A 2FA0_A 2F9A_A 2F82_A ....
Probab=96.39 E-value=0.0014 Score=62.74 Aligned_cols=62 Identities=24% Similarity=0.277 Sum_probs=44.7
Q ss_pred cchhhHHHHhhhcCCCcchHHHHHHHHH--HcCCCCCCCeEEEEeeccchhhhhhhhhhccccC
Q 015082 327 HMEPSRMTLYRFGNTSSSSLWYELAYSE--AKGRIKKGDRTWQIAFGSGFKCNSAVWKALRSIN 388 (413)
Q Consensus 327 ~~~~s~~~l~~~Gn~~sasi~i~L~~~~--~~g~l~~Gd~vll~~~G~G~~~~a~llr~~~~~~ 388 (413)
|+.+|...-+++||+.+||+++.|..++ .....-.|++|+|+|+|+|+.....-+++.+...
T Consensus 143 kv~psl~~~~~vGN~YTaSly~~L~SlL~~~~~~~l~GkrI~~FSYGSG~~s~~fs~~v~~~~~ 206 (282)
T PF08540_consen 143 KVEPSLLYSRQVGNMYTASLYLGLASLLSSAEADDLAGKRIGMFSYGSGLASEFFSGRVQPGAE 206 (282)
T ss_dssp HCHHHTHHHHHHB--GGGHHHHHHHHHHHHHHSCHHTT-EEEEEEEETTTEEEEEEEEE-TTGG
T ss_pred HHhHHHHHHHHcCceehHHHHHHHHHHhhccCccccCCCEEEEEEecCCcceeEEEEEEeCCcc
Confidence 3344555567899999999999999999 3445558999999999999888777777665433
No 137
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....
Probab=95.46 E-value=0.015 Score=45.70 Aligned_cols=75 Identities=15% Similarity=0.231 Sum_probs=43.8
Q ss_pred HHhCCCCCCCcCeEEEEccCCCCCCChHHHHHHHcCCCCCcceEEec---CccchhHHHHHHHHHHHHHcCCCCeEEEEE
Q 015082 90 FAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLG---GMGCSAGLISIDLANNLLQVHPNSYALVIS 166 (413)
Q Consensus 90 L~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~v~---~~~C~~~~~al~~A~~~i~~g~~~~vLVv~ 166 (413)
|+++|++++|||.+++.... ......+.+++|++++.....+. +.+|++...+|..+..-=+-.+.+++|+++
T Consensus 1 L~~~g~~~~did~~i~hq~~----~~~~~~~~~~lgi~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~~g~~~~Gd~vl~~~ 76 (90)
T PF08541_consen 1 LERAGLSPDDIDHFIPHQAS----KKILDSIAKRLGIPPERFPDNLAEYGNTGSASIPINLADALEEGRIKPGDRVLLVG 76 (90)
T ss_dssp HHHTT--GGGESEEEE-SSS----HHHHHHHHHHHTS-GGGBE-THHHH-B-GGGHHHHHHHHHHHTTSSCTTEEEEEEE
T ss_pred CccccCCHHHCCEEEeCCCC----HHHHHHHHHHcCCcHHHHHHHHhccCcchhhhHHHHHHHHHHcCCCCCCCEEEEEE
Confidence 78999999999999988642 23445688999998543332222 245555555664444322223578898888
Q ss_pred Ec
Q 015082 167 ME 168 (413)
Q Consensus 167 ~e 168 (413)
.-
T Consensus 77 ~G 78 (90)
T PF08541_consen 77 FG 78 (90)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 138
>PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain
Probab=95.28 E-value=0.32 Score=44.92 Aligned_cols=113 Identities=13% Similarity=-0.050 Sum_probs=75.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCeEEEEccCCC----------------CCCC---------hHHHHHHHcCCCCCcce
Q 015082 78 AEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFN----------------PTPS---------LSAMVINHYKLRGNIIS 132 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~----------------~~p~---------~a~~v~~~lGl~~~~~~ 132 (413)
...|++.++.+++++. +++|.+||+|..+. ..|. .+.++.-..|. ..+.
T Consensus 34 ~~rla~~~a~~~~~~~----~~~d~~VfaS~~Gel~~t~~ll~~l~~~~~lSPT~Fs~SVHNA~aG~~sI~~~~--~~~~ 107 (218)
T PF13723_consen 34 LSRLALEAALECLAED----EQPDAIVFASRHGELERTFKLLEALAEEEELSPTAFSQSVHNAAAGYWSIATKN--TGPN 107 (218)
T ss_pred HHHHHHHHHHHHHhcc----CCCCcEEEEeCCCcHHHHHHHHHHHHhCCCcCccchhhhhhhHHHHHHHHHhCC--CCce
Confidence 4577788988888653 57889999875211 2231 23333334444 3677
Q ss_pred EEecCccchhHHHHHHHHHHHHHcCCCCeEEEEEEccccCCCccCC-CccchhhhcccccCceEEEEecCCC
Q 015082 133 YNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENITLNWYFGN-DRSKLVSNCLFRMGGAAILLSNRFS 203 (413)
Q Consensus 133 ~~v~~~~C~~~~~al~~A~~~i~~g~~~~vLVv~~e~~s~~~~~~~-d~~~~~~~~lfGDGAaA~ll~~~~~ 203 (413)
..+. .+-.++-.||.-|..++..| .+.||||+.|-.....+... +.. ....--|.|++|++++.
T Consensus 108 tal~-a~~~sf~~aLleA~~~l~~~-~~~VLlv~~De~~p~~y~~~~~~~-----~~~~~~A~al~L~~~~~ 172 (218)
T PF13723_consen 108 TALA-AGEDSFEAALLEAAAQLAEG-AEPVLLVCYDEPLPEPYQEFRPER-----DPPFPYALALVLSPGDS 172 (218)
T ss_pred EEEe-cCcchHHHHHHHHHHHHHcC-CCCEEEEEeCCCCChhhhhccccc-----CCCcCEEEEEEecCCCC
Confidence 8888 58889999999999999999 99999999997554222211 111 12233688889987665
No 139
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=94.07 E-value=0.33 Score=48.80 Aligned_cols=87 Identities=17% Similarity=0.226 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCcCeEEEEccCCCCCCChHHHHHHHc-----CCCCCcceE---EecCccchhHHHHH
Q 015082 76 KEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHY-----KLRGNIISY---NLGGMGCSAGLISI 147 (413)
Q Consensus 76 ~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~l-----Gl~~~~~~~---~v~~~~C~~~~~al 147 (413)
+...+...++++++|+++|++++|||.++..... ...-..++++| |++++.... .+.+.+|++..-+|
T Consensus 268 ~~~~~~~~~~i~~~L~~~gl~~~DId~~v~Hq~n----~~~~~~v~~~l~~~~~gl~~~k~~~~~~~~GNt~sAsipi~L 343 (378)
T PRK06816 268 ENIVVYTIKPLLELVDKRNLDPDDIDYFLPHYSS----EYFREKIVELLAKAGFMIPEEKWFTNLATVGNTGSASIYIML 343 (378)
T ss_pred HHhHHHHHHHHHHHHHHcCCChhhCCEEeeCccc----HHHHHHHHHHHHhccCCCChhheEEeccccccccchHHHHHH
Confidence 3455666889999999999999999999876542 23345666665 887543222 23334556666666
Q ss_pred HHHHHHHHcC---CCCeEEEEEEcc
Q 015082 148 DLANNLLQVH---PNSYALVISMEN 169 (413)
Q Consensus 148 ~~A~~~i~~g---~~~~vLVv~~e~ 169 (413)
..+ ++.| +.++|++.+.+.
T Consensus 344 ~~a---~~~g~~~~Gd~vl~~~~~s 365 (378)
T PRK06816 344 DEL---LNSGRLKPGQKILCFVPES 365 (378)
T ss_pred HHH---HHcCCCCCCCEEEEEEecc
Confidence 544 3333 468888887775
No 140
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=94.02 E-value=0.19 Score=49.81 Aligned_cols=83 Identities=12% Similarity=0.152 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCeEEEEccCCCCCCChHHHHHHHcCCCCCcceE-----EecCccchhHHHHHHHHHH
Q 015082 78 AEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISY-----NLGGMGCSAGLISIDLANN 152 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lGl~~~~~~~-----~v~~~~C~~~~~al~~A~~ 152 (413)
..+.+.++++++|+++|++++|||.+++.... ...-..++++||++++.... ++.+.++++..-+|..+..
T Consensus 206 ~~~~~~~~~~~~L~~~gl~~~did~~i~Hq~~----~~~~~~~~~~lgl~~ek~~~~~~~~~~GNt~sAsipl~L~~~~~ 281 (345)
T TIGR00748 206 YFHHVVTAAKGLMEKLGLTPEDFDYAVFHQPN----GKFYLVAARMLGFPKEQVKPGLLTPRIGNTYSGATPVGLSAVLD 281 (345)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEeCCCC----hHHHHHHHHHcCCCHHHeeccccccccCchhhhHHHHHHHHHHH
Confidence 34455688999999999999999999987542 22445689999998543322 3344566666667765544
Q ss_pred HHHcCCCCeEEEEE
Q 015082 153 LLQVHPNSYALVIS 166 (413)
Q Consensus 153 ~i~~g~~~~vLVv~ 166 (413)
.+ .+.++||+++
T Consensus 282 ~~--~~Gd~vll~~ 293 (345)
T TIGR00748 282 IA--EPGDRILAVS 293 (345)
T ss_pred hc--CCCCEEEEEE
Confidence 32 2445666665
No 141
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=93.94 E-value=0.11 Score=52.65 Aligned_cols=86 Identities=15% Similarity=-0.042 Sum_probs=56.6
Q ss_pred hhccccEEEecCCChHHHHHHHHhcCCCcccchhhHHHHhhhcCCCcchHHHHHHHHHHcCCCCCCCeEEEEeeccchhh
Q 015082 297 FKLAFEHFCIHAGGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKC 376 (413)
Q Consensus 297 ~~~did~~i~hq~~~~~~~~i~~~lgi~~e~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~l~~Gd~vll~~~G~G~~~ 376 (413)
.++|||.+=+|-.-....-...|.||+..+++..+- -.-.+||..+|+=...+.++..+=+-+.|.+.+....+.|-..
T Consensus 307 ~~~Did~~Ei~d~f~~~~l~~~e~lg~~~~~vN~~G-G~l~~Ghp~gasG~~~~~~~~~~l~~~~~~~g~~~~~~~gg~g 385 (394)
T PLN02644 307 EASQVDYYEINEAFSVVALANQKLLGLDPEKVNVHG-GAVSLGHPIGCSGARILVTLLGVLRSKNGKYGVAGICNGGGGA 385 (394)
T ss_pred CHHHCCEEEeCcHHHHHHHHHHHHhCCCccccCCCC-ChHhhCCCHHHHHHHHHHHHHHHHHhcCCCeEEEEEeccCCce
Confidence 378999999998887777788899999877764311 2335899988887777777665322234556555333333334
Q ss_pred hhhhhhh
Q 015082 377 NSAVWKA 383 (413)
Q Consensus 377 ~a~llr~ 383 (413)
++++|++
T Consensus 386 ~a~~~e~ 392 (394)
T PLN02644 386 SAIVVEL 392 (394)
T ss_pred eEEEEEe
Confidence 5555543
No 142
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=93.57 E-value=0.28 Score=48.11 Aligned_cols=85 Identities=9% Similarity=0.127 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCcCeEEEEccCCCCCCChHHHHHHHcCCCCCcceEEec---CccchhHHHHHHHHHH
Q 015082 76 KEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLG---GMGCSAGLISIDLANN 152 (413)
Q Consensus 76 ~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~v~---~~~C~~~~~al~~A~~ 152 (413)
+.+.+...++++++|+++|++++|||.+++.... ...-..++++||++++.....+. +.+|++...+| ..
T Consensus 226 ~~~~~~~~~~i~~~L~~~gl~~~did~~~~H~~~----~~~~~~i~~~l~l~~e~~~~~~~~~Gn~~sas~~~~L---~~ 298 (329)
T PRK07204 226 KLSSKYLMKFIDKLLMDAGYTLADIDLIVPHQAS----GPAMRLIRKKLGVDEERFVTIFEDHGNMIAASIPVAL---FE 298 (329)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEeCCCC----HHHHHHHHHHcCCCHHHhhhhHhhhCcHHHHHHHHHH---HH
Confidence 3456667789999999999999999999887542 12346889999998543322222 12223333333 34
Q ss_pred HHHcC---CCCeEEEEEE
Q 015082 153 LLQVH---PNSYALVISM 167 (413)
Q Consensus 153 ~i~~g---~~~~vLVv~~ 167 (413)
+++.| +.+++|+++.
T Consensus 299 ~~~~g~~~~Gd~vll~~~ 316 (329)
T PRK07204 299 AIKQKKVQRGNKILLLGT 316 (329)
T ss_pred HHHcCCCCCCCEEEEEEE
Confidence 45544 4577777764
No 143
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=93.49 E-value=0.24 Score=48.70 Aligned_cols=89 Identities=12% Similarity=0.190 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCcCeEEEEccCCCCCCChHHHHHHHcCCCCCcceEE---ecCccchhHHHHHHHH
Q 015082 74 ARKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYN---LGGMGCSAGLISIDLA 150 (413)
Q Consensus 74 ~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~---v~~~~C~~~~~al~~A 150 (413)
..+...+...++.+++|+++|++++|||.+++.... +..-..+.++||++++..... ..+.++++...+|..+
T Consensus 233 ~~~~~~~~~~~~~~~~L~~~g~~~~did~~i~H~~~----~~~~~~~~~~lgl~~~k~~~~~~~~GN~~sas~~~~L~~~ 308 (338)
T PRK09258 233 LLKEGVELAVDTWEAFLAQLGWAVEQVDRVICHQVG----AAHTRAILKALGIDPEKVFTTFPTLGNMGPASLPITLAMA 308 (338)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEecCCCC----HHHHHHHHHHhCCCHHHceehHhhhCCcHHhHHHHHHHHH
Confidence 344556677788999999999999999998887542 234568888999985433322 2223444444455433
Q ss_pred HHHHHcC---CCCeEEEEEEcc
Q 015082 151 NNLLQVH---PNSYALVISMEN 169 (413)
Q Consensus 151 ~~~i~~g---~~~~vLVv~~e~ 169 (413)
++.| +.+++|+++...
T Consensus 309 ---~~~g~~~~Gd~vll~~~G~ 327 (338)
T PRK09258 309 ---AEEGFLKPGDRVALLGIGS 327 (338)
T ss_pred ---HHhCCCCCCCEEEEEEech
Confidence 4433 467888877553
No 144
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=93.35 E-value=0.23 Score=48.68 Aligned_cols=82 Identities=9% Similarity=0.140 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCeEEEEccCCCCCCChHHHHHHHcCCCCCcceEEecCc---cchhHHHHHHHHHHHHH
Q 015082 79 EAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGM---GCSAGLISIDLANNLLQ 155 (413)
Q Consensus 79 ~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~---~C~~~~~al~~A~~~i~ 155 (413)
.+...++++++|+++|++++|||.+++.... ......++++||++++.....+... +|++...+| ..+++
T Consensus 225 ~~~~~~~i~~~L~~~g~~~~did~~~~hq~~----~~~~~~~~~~lgl~~~k~~~~l~~~Gn~~sasi~~~L---~~~~~ 297 (326)
T CHL00203 225 VFQVPAVIIKCLNALNISIDEVDWFILHQAN----KRILEAIANRLSVPNSKMITNLEKYGNTSAASIPLAL---DEAIQ 297 (326)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEECCCC----HHHHHHHHHHhCCCHHHhhhHHHhhCcHHHHHHHHHH---HHHHH
Confidence 3556778999999999999999999887642 2345678999999854433333322 333333444 33444
Q ss_pred cC---CCCeEEEEEE
Q 015082 156 VH---PNSYALVISM 167 (413)
Q Consensus 156 ~g---~~~~vLVv~~ 167 (413)
.| +.+++|+++.
T Consensus 298 ~g~~~~Gd~vll~~~ 312 (326)
T CHL00203 298 NNKIQPGQIIVLSGF 312 (326)
T ss_pred hCCCCCCCEEEEEEE
Confidence 44 4567777764
No 145
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=93.07 E-value=0.25 Score=48.18 Aligned_cols=84 Identities=15% Similarity=0.285 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCcCeEEEEccCCCCCCChHHHHHHHcCCCCCcceEEe---cCccchhHHHHHHHHHHH
Q 015082 77 EAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNL---GGMGCSAGLISIDLANNL 153 (413)
Q Consensus 77 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~v---~~~~C~~~~~al~~A~~~ 153 (413)
...+-..++++++|+++|++++|||.+++... .+..-..++++||++++.....+ .+.+|++.+.+|.. +
T Consensus 216 ~~~~~~~~~~~~~l~~~g~~~~di~~~~~h~~----~~~~~~~~~~~lgi~~~k~~~~~~~~Gn~~sas~~~~L~~---~ 288 (318)
T TIGR00747 216 HAVRKMGDVVEETLEANGLDPEDIDWFVPHQA----NLRIIEALAKRLELDMSQVVKTVHKYGNTSAASIPLALDE---L 288 (318)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHcCCCHHHeeehHhhhCCHHHHHHHHHHHH---H
Confidence 34455677899999999999999999987543 23355778999999853222222 12344444445533 3
Q ss_pred HHcC---CCCeEEEEEE
Q 015082 154 LQVH---PNSYALVISM 167 (413)
Q Consensus 154 i~~g---~~~~vLVv~~ 167 (413)
++.| +.+++|+++.
T Consensus 289 ~~~~~~~~Gd~vll~~~ 305 (318)
T TIGR00747 289 LRTGRIKPGDLLLLVAF 305 (318)
T ss_pred HHcCCCCCCCEEEEEEE
Confidence 3443 3577777774
No 146
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=92.93 E-value=0.24 Score=48.52 Aligned_cols=86 Identities=15% Similarity=0.136 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCcCeEEEEccCCCCCCChHHHHHHHcCCCCCcceEEec---CccchhHHHHHHHHHH
Q 015082 76 KEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLG---GMGCSAGLISIDLANN 152 (413)
Q Consensus 76 ~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~v~---~~~C~~~~~al~~A~~ 152 (413)
+.+.+...++++++|+++|++++|||.+++.... +..-..+.++||++++.....+. +.++++...+|. .
T Consensus 223 ~~~~~~~~~~~~~~L~~~gl~~~did~~~~h~~~----~~~~~~~~~~l~l~~~k~~~~l~~~Gn~~sas~~~~L~---~ 295 (326)
T PRK05963 223 TEAVRMMSGASQNVLASAAMTPQDIDRFFPHQAN----ARIVDKVCETIGIPRAKAASTLETYGNSSAATIPLSLS---L 295 (326)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEeCCCC----HHHHHHHHHHcCCCHHHhhhhHHhhCcHHHHHHHHHHH---H
Confidence 3456667889999999999999999998885431 34556788999998544322221 123333334443 3
Q ss_pred HHHcC---CCCeEEEEEEc
Q 015082 153 LLQVH---PNSYALVISME 168 (413)
Q Consensus 153 ~i~~g---~~~~vLVv~~e 168 (413)
+++.+ +.+++|+++.-
T Consensus 296 ~~~~~~~~~Gd~vll~~~G 314 (326)
T PRK05963 296 ANLEQPLREGERLLFAAAG 314 (326)
T ss_pred HHHhCCCCCCCEEEEEEEe
Confidence 33333 45788887753
No 147
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=92.62 E-value=0.2 Score=50.81 Aligned_cols=58 Identities=10% Similarity=-0.018 Sum_probs=40.8
Q ss_pred hhccccEEEecCCChHHHHHHHHhcCCCcccchhhHHHHhhhcCCCcchHHHHHHHHHH
Q 015082 297 FKLAFEHFCIHAGGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEA 355 (413)
Q Consensus 297 ~~~did~~i~hq~~~~~~~~i~~~lgi~~e~~~~s~~~l~~~Gn~~sasi~i~L~~~~~ 355 (413)
.++|||.+=+|-.-....-.+.+.||+...++..+-- .-.+||..+++=.+.+.+++.
T Consensus 313 ~~~did~~ei~D~f~~~~l~~~e~lg~~~~~vN~~GG-~la~GHp~gasG~~~~~~~~~ 370 (399)
T PRK09052 313 KQDDLDWIELNEAFAAQSLAVIRDLGLDPSKVNPLGG-AIALGHPLGATGAIRTATVVH 370 (399)
T ss_pred CHHHcCEEEeCcHHHHHHHHHHHHhCCCCcccCCCCc-hhhcCchHHHHHHHHHHHHHH
Confidence 3689999998887666666677899998776632111 225899988886666665554
No 148
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=92.56 E-value=0.46 Score=46.37 Aligned_cols=83 Identities=12% Similarity=0.141 Sum_probs=53.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCeEEEEccCCCCCCChHHHHHHHcCCCCCcceEEe---cCccchhHHHHHHHHHHHH
Q 015082 78 AEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNL---GGMGCSAGLISIDLANNLL 154 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~v---~~~~C~~~~~al~~A~~~i 154 (413)
+.+...++++++|+++|++++|||.+++.... +.....++++||++++.....+ .+.+|++...+| ..++
T Consensus 223 ~~~~~~~~i~~~L~~~g~~~~did~~~~h~~~----~~~~~~~~~~lg~~~~~~~~~~~~~Gn~~sas~~~~L---~~~~ 295 (325)
T PRK12879 223 AVRTMPKGARQVLEKAGLTKDDIDWVIPHQAN----LRIIESLCEKLGIPMEKTLVSVEYYGNTSAATIPLAL---DLAL 295 (325)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEECCCC----HHHHHHHHHHcCCCHHHhhhhHhhhCchHHHHHHHHH---HHHH
Confidence 34555678899999999999999999887531 3345678999999753322222 222344444444 3445
Q ss_pred HcC---CCCeEEEEEE
Q 015082 155 QVH---PNSYALVISM 167 (413)
Q Consensus 155 ~~g---~~~~vLVv~~ 167 (413)
+.| +.+++|+++.
T Consensus 296 ~~g~~~~Gd~vll~~~ 311 (325)
T PRK12879 296 EQGKIKPGDTLLLYGF 311 (325)
T ss_pred HcCCCCCCCEEEEEEE
Confidence 554 3567777774
No 149
>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism]
Probab=92.49 E-value=0.12 Score=49.42 Aligned_cols=90 Identities=13% Similarity=0.085 Sum_probs=52.6
Q ss_pred hhccccEEEecCCChHHHHHHHHhcCCCcccchh---hHHHHhhhcCCCcchHHHHHHHHHHcCCCCCCCe-EEEEeecc
Q 015082 297 FKLAFEHFCIHAGGRAVLDELEKNLQLSDWHMEP---SRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDR-TWQIAFGS 372 (413)
Q Consensus 297 ~~~did~~i~hq~~~~~~~~i~~~lgi~~e~~~~---s~~~l~~~Gn~~sasi~i~L~~~~~~g~l~~Gd~-vll~~~G~ 372 (413)
..+|||.|=++..-..=.-.-.++|++++||+.. ++....-.|-+|+=-+.-.|+++.++|+ .+.. |+-+.+|.
T Consensus 336 ~v~did~FEINEAFAsQ~~yc~~KL~ld~ekVN~~GGaiAlGHPlGatGAR~VaTlL~emKrrgk--d~~~GVvSmCIGt 413 (435)
T KOG1389|consen 336 EVDDIDLFEINEAFASQALYCRNKLGLDPEKVNVNGGAIALGHPLGATGARCVATLLHEMKRRGK--DCRFGVVSMCIGT 413 (435)
T ss_pred cccccceeehhHHHHHHHHHHHHHhCCCHHHcCCCCceeeccCCcCCccHhHHHHHHHHHHhhcc--ccccceEEEeecC
Confidence 3689998877654433333346889999999842 1112223455555555555666666554 2322 55556666
Q ss_pred chhhhhhhhhhccccCC
Q 015082 373 GFKCNSAVWKALRSINS 389 (413)
Q Consensus 373 G~~~~a~llr~~~~~~~ 389 (413)
|+.. +++|++.+.+.+
T Consensus 414 GmGa-AAvFer~~~~d~ 429 (435)
T KOG1389|consen 414 GMGA-AAVFERGGGVDE 429 (435)
T ss_pred Ccch-heeeecCCCCch
Confidence 6643 677887765443
No 150
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=92.25 E-value=0.21 Score=50.21 Aligned_cols=85 Identities=11% Similarity=-0.050 Sum_probs=55.2
Q ss_pred hhccccEEEecCCChHHHHHHHHhcCCCcccchhhHHHHhhhcCCCcchHHHHHHHHHHcCCCCCCCeEEEEeeccchhh
Q 015082 297 FKLAFEHFCIHAGGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKC 376 (413)
Q Consensus 297 ~~~did~~i~hq~~~~~~~~i~~~lgi~~e~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~l~~Gd~vll~~~G~G~~~ 376 (413)
.++|||.+=+|-.-....-...|.||+.++++.. .--.-.+||...|+=...+.++.++=+-+.+.+.+....|+|...
T Consensus 296 ~~~did~~e~~d~Fa~~~~~~~e~lG~~~~pvN~-~GG~l~~Ghp~gasG~~~~~e~~~qL~~~~~~~gl~~~~gggg~~ 374 (382)
T PRK07801 296 SIDDIDVVEINEAFAPVVLAWLKETGADPAKVNP-NGGAIALGHPLGATGAKLMTTLLHELERTGGRYGLQTMCEGGGTA 374 (382)
T ss_pred CHHHcCEeeecccchHHHHHHHHHhCCCchhcCC-CcchhhhcCcHHHHHHHHHHHHHHHHHhcCCCEEEEEEcccccce
Confidence 3789999999998888888889999999887642 111345899988887777766655311122334444445545444
Q ss_pred hhhhhh
Q 015082 377 NSAVWK 382 (413)
Q Consensus 377 ~a~llr 382 (413)
.+++|+
T Consensus 375 ~~~vl~ 380 (382)
T PRK07801 375 NVTIIE 380 (382)
T ss_pred eEEEEE
Confidence 444443
No 151
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=92.21 E-value=0.24 Score=50.14 Aligned_cols=59 Identities=8% Similarity=-0.042 Sum_probs=42.6
Q ss_pred chhccccEEEecCCChHHHHHHHHhcCCCcccchhhHHHHhhhcCCCcchHHHHHHHHHH
Q 015082 296 DFKLAFEHFCIHAGGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEA 355 (413)
Q Consensus 296 ~~~~did~~i~hq~~~~~~~~i~~~lgi~~e~~~~s~~~l~~~Gn~~sasi~i~L~~~~~ 355 (413)
..++|||.|=+|-.-....-.+.+.||++.+++.. .--.--+||..+|+=...+.+++.
T Consensus 315 l~~~DID~~ei~daFa~~~l~~~e~lG~~~~~vN~-~GG~la~GHP~GAsG~~~~~~l~~ 373 (402)
T PRK08242 315 LTVDDIDLFELNEAFASVVLRFMQALDIPHDKVNV-NGGAIAMGHPLGATGAMILGTVLD 373 (402)
T ss_pred CCHHHCCEEEecchhhHHHHHHHHHhCCCCcCCCc-CCCHHhcCCcHHHHHHHHHHHHHH
Confidence 34789999999988877777788999998887742 112345899988776666555444
No 152
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=92.08 E-value=0.71 Score=46.39 Aligned_cols=84 Identities=12% Similarity=0.153 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCcCeEEEEccCCCCCCChHHHHHHHcCCCCCcceEEe---cCccchhHHHHHHHHHHH
Q 015082 77 EAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNL---GGMGCSAGLISIDLANNL 153 (413)
Q Consensus 77 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~v---~~~~C~~~~~al~~A~~~ 153 (413)
.+.+...++++++|+++|++++|||.++..... ..+-..++++||++++.....+ .+.++++...+|. .+
T Consensus 277 ~~~~~~~~~i~~~L~~~gl~~~dId~~v~Hq~n----~~~~~~~~~~Lgl~~ek~~~~l~~~GNt~sAsi~~~L~---~~ 349 (379)
T PLN02326 277 FAVRCVPQVIESALQKAGLTAESIDWLLLHQAN----QRIIDAVAQRLGIPPEKVISNLANYGNTSAASIPLALD---EA 349 (379)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCC----HHHHHHHHHHcCCCHHHeeecHhhcCcHHHHHHHHHHH---HH
Confidence 345556788999999999999999998887542 2234568999999864333222 2233344444443 33
Q ss_pred HHcC---CCCeEEEEEE
Q 015082 154 LQVH---PNSYALVISM 167 (413)
Q Consensus 154 i~~g---~~~~vLVv~~ 167 (413)
++.| +.+++|+++.
T Consensus 350 ~~~g~~~~Gd~vll~~~ 366 (379)
T PLN02326 350 VRSGKVKKGDVIATAGF 366 (379)
T ss_pred HHcCCCCCCCEEEEEEE
Confidence 4443 4577777764
No 153
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=92.04 E-value=0.49 Score=45.99 Aligned_cols=85 Identities=19% Similarity=0.280 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCcCeEEEEccCCCCCCChHHHHHHHcCCCCCcceEEe---cCccchhHHHHHHHHHH
Q 015082 76 KEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNL---GGMGCSAGLISIDLANN 152 (413)
Q Consensus 76 ~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~v---~~~~C~~~~~al~~A~~ 152 (413)
+...+...++++++|+++|++++|||.+++.... +..-..+.++||++++.....+ .+.++++....|. +
T Consensus 219 ~~~~~~~~~~i~~~l~~~g~~~~di~~~~~h~~~----~~~~~~~~~~lgl~~~~~~~~~~~~Gn~~sas~~~~L~---~ 291 (320)
T cd00830 219 KFAVRLMPESIEEALEKAGLTPDDIDWFVPHQAN----LRIIEAVAKRLGLPEEKVVVNLDRYGNTSAASIPLALD---E 291 (320)
T ss_pred HHHHHhhHHHHHHHHHHcCCCHHHCCEEEECCCC----HHHHHHHHHHhCCCHHHhhhhHHhhCcHHHHHHHHHHH---H
Confidence 3455677889999999999999999998877542 3344668899999744332222 1123333444443 3
Q ss_pred HHHcC---CCCeEEEEEE
Q 015082 153 LLQVH---PNSYALVISM 167 (413)
Q Consensus 153 ~i~~g---~~~~vLVv~~ 167 (413)
+++.+ +.+++|+++.
T Consensus 292 ~~~~~~~~~G~~vll~~~ 309 (320)
T cd00830 292 AIEEGKLKKGDLVLLLGF 309 (320)
T ss_pred HHHcCCCCCCCEEEEEEE
Confidence 44444 4688888775
No 154
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=91.93 E-value=0.18 Score=50.92 Aligned_cols=58 Identities=5% Similarity=-0.177 Sum_probs=39.0
Q ss_pred hhccccEEEecCCChHHHHHHHHhcCCCcccchhhHHHHhhhcCCCcchHHHHHHHHHH
Q 015082 297 FKLAFEHFCIHAGGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEA 355 (413)
Q Consensus 297 ~~~did~~i~hq~~~~~~~~i~~~lgi~~e~~~~s~~~l~~~Gn~~sasi~i~L~~~~~ 355 (413)
.++|||.+=+|-......-...+.||+.++++.. .--.-.+||..+++=...+.+++.
T Consensus 306 ~~~Did~~ei~eafa~~~l~~~e~lg~~~~~vN~-~GG~~a~GHp~gatG~r~~~~l~~ 363 (392)
T PRK07108 306 KVDDIDLWELNEAFAVQVLYCRDTLGIPMDRLNV-NGGAIAVGHPYGVSGARLTGHALI 363 (392)
T ss_pred CHHHcCchHhhhHHHHHHHHHHHhcCCCccccCC-CCChHHhCcchhhhHHHHHHHHHH
Confidence 3789999988876655545567899998777642 122345899988876655555444
No 155
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=91.81 E-value=1.9 Score=48.49 Aligned_cols=126 Identities=17% Similarity=0.167 Sum_probs=81.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcC----eEEEEc-cC--CC---CCC---------Ch-HHHHHHHcCC--CCCcceEEe
Q 015082 78 AEAVMFGAIDELFAKTSVKPKDIG----ILIVNC-SL--FN---PTP---------SL-SAMVINHYKL--RGNIISYNL 135 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~~Id----~li~~s-~~--~~---~~p---------~~-a~~v~~~lGl--~~~~~~~~v 135 (413)
...|..++.-+|+-++|++|.++. .++.++ .+ .. ..| .. -.+.++++.. +-..|.+.+
T Consensus 87 q~RlLLE~t~EAivDaGiNP~~LRGs~tGv~vg~s~seTs~~~~~dp~t~~Gy~mtgc~raMfaNRiSytFDfqGPS~s~ 166 (2376)
T KOG1202|consen 87 QLRLLLEATWEAIVDAGINPDDLRGSRTGVFVGVSGSETSGALSQDPDTVNGYSMTGCVRAMFANRISYTFDFQGPSFSV 166 (2376)
T ss_pred HHHHHHHHHHHHHHhCCCChhhcCcccceeEEeecCccccccccCCCccccceeecccHHHHhhcceeEEEeccCCchhh
Confidence 567889999999999999998765 244442 21 11 111 11 1233344321 113577888
Q ss_pred cCccchhHHHHHHHHHHHHHcCCCCeEEEEEEccccC-----CCcc-----CC----CccchhhhcccccCceEEEEecC
Q 015082 136 GGMGCSAGLISIDLANNLLQVHPNSYALVISMENITL-----NWYF-----GN----DRSKLVSNCLFRMGGAAILLSNR 201 (413)
Q Consensus 136 ~~~~C~~~~~al~~A~~~i~~g~~~~vLVv~~e~~s~-----~~~~-----~~----d~~~~~~~~lfGDGAaA~ll~~~ 201 (413)
+ .+|++.+.||+.|.+-+++|+++.++|.++-..-. .|.+ ++ ..++.=+.+-=+||.+|++|.+.
T Consensus 167 D-tacsSsl~al~~a~~~~r~gqcd~AiVaG~~liLkPt~slQFlRLgmls~dGsCkaFDeagnGY~Rseg~~avllqrk 245 (2376)
T KOG1202|consen 167 D-TACSSSLMALQNAFQDIRSGQCDAAIVAGANLILKPTTSLQFLRLGMLSPDGSCKAFDEAGNGYCRSEGVVAVLLQRK 245 (2376)
T ss_pred h-hhhHHHHHHHHHHHHhhhccCCchhhhcccceEeccchhhHHHHhcCcCCCCcccchhccCCceeecCceEEEEEehh
Confidence 8 79999999999999999999999999988874321 1211 11 01111123556799999999987
Q ss_pred CCC
Q 015082 202 FSD 204 (413)
Q Consensus 202 ~~~ 204 (413)
...
T Consensus 246 ~~A 248 (2376)
T KOG1202|consen 246 SLA 248 (2376)
T ss_pred HHH
Confidence 653
No 156
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=91.77 E-value=0.25 Score=49.76 Aligned_cols=84 Identities=12% Similarity=-0.072 Sum_probs=53.0
Q ss_pred hhccccEEEecCCChHHHHHHHHhcCCCcccchhhHHHHhhhcCCCcchHHHHHHHHHHcCCCCCCCeEEEEeeccchhh
Q 015082 297 FKLAFEHFCIHAGGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKC 376 (413)
Q Consensus 297 ~~~did~~i~hq~~~~~~~~i~~~lgi~~e~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~l~~Gd~vll~~~G~G~~~ 376 (413)
.++|||.+-+|-......-...|.||+....+.. .--.-.+||+..|+=...+.++..+=+=+.+.+.+..+.+.|-..
T Consensus 302 ~~~did~~e~~d~fa~~~~~~~e~lG~~~~pvn~-~GG~l~~Ghp~gasG~~~~~e~~~qL~g~~~~~gl~~~~~~gG~g 380 (386)
T TIGR01930 302 SISDIDLFEINEAFAAQVLACIKELGLDLEKVNV-NGGAIALGHPLGASGARIVTTLLHELKRRGGRYGLATICIGGGQG 380 (386)
T ss_pred CHHHCCeeehcchhHHHHHHHHHHhCCChhhcCC-CCChHhhCCcHHHHHHHHHHHHHHHHHhcCCCEEEEEEeccCCce
Confidence 3789999999988876666778999986444421 112335899998887777776655311124566666555544344
Q ss_pred hhhhh
Q 015082 377 NSAVW 381 (413)
Q Consensus 377 ~a~ll 381 (413)
.++++
T Consensus 381 ~~~~~ 385 (386)
T TIGR01930 381 IAVIL 385 (386)
T ss_pred EEEEe
Confidence 44444
No 157
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=91.56 E-value=0.43 Score=48.19 Aligned_cols=59 Identities=8% Similarity=-0.085 Sum_probs=43.7
Q ss_pred hhccccEEEecCCChHHHHHHHHhcCCCcccchhhHHHHhhhcCCCcchH---HHHHHHHHHc
Q 015082 297 FKLAFEHFCIHAGGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSL---WYELAYSEAK 356 (413)
Q Consensus 297 ~~~did~~i~hq~~~~~~~~i~~~lgi~~e~~~~s~~~l~~~Gn~~sasi---~i~L~~~~~~ 356 (413)
.++|||.+=+|-.-....-...|.||+.++++..+ -=+--+||..+|+= ...|.+.++.
T Consensus 304 ~~~Did~~Ei~d~Fa~~~l~~~e~lG~~~~pvN~~-GG~la~Ghp~gatG~r~~~~l~~~lr~ 365 (390)
T PRK06504 304 KIDDIDLYEVNEAFASVPLAWLKATGADPERLNVN-GGAIALGHPLGASGTKLMTTLVHALKQ 365 (390)
T ss_pred CHHHCCEEEecccchHHHHHHHHHhCCCCCCcCCC-CcHHhcCCCcchhHHHHHHHHHHHHHh
Confidence 37899999999998888888899999998876321 11345899997776 5566666653
No 158
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=91.55 E-value=0.26 Score=49.88 Aligned_cols=85 Identities=12% Similarity=-0.014 Sum_probs=53.9
Q ss_pred hhccccEEEecCCChHHHHHHHHhcCCCcccchhhHHHHhhhcCCCcchHHHHHHHHHHcCCCCCCCeEEE-Eeeccchh
Q 015082 297 FKLAFEHFCIHAGGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQ-IAFGSGFK 375 (413)
Q Consensus 297 ~~~did~~i~hq~~~~~~~~i~~~lgi~~e~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~l~~Gd~vll-~~~G~G~~ 375 (413)
.++|||.+=+|-.-....-...|.||+.++++.. .--.-.+||..+|+=...+.++..+=+-+.|++.+. +..|.|.
T Consensus 307 ~~~did~~e~~d~f~~~~l~~~e~lg~~~~pvN~-~GG~la~Ghp~gasG~~~~~~l~~qL~~~~~~~g~~~~c~~gG~- 384 (393)
T PRK08235 307 TVEDIDLFEINEAFAAVALASTEIAGIDPEKVNV-NGGAVALGHPIGASGARIIVTLIHELKRRGGGIGIAAICSGGGQ- 384 (393)
T ss_pred CHHHCCeehhcchhHHHHHHHHHHhCCCcccCCc-CCchHHhCCcHHHHHHHHHHHHHHHHHhcCCCeEEEEEcccccc-
Confidence 3689999988888777777788999998777632 112335899988887666666555322235556443 3344443
Q ss_pred hhhhhhhh
Q 015082 376 CNSAVWKA 383 (413)
Q Consensus 376 ~~a~llr~ 383 (413)
..+++|+.
T Consensus 385 g~a~~~e~ 392 (393)
T PRK08235 385 GDAVLIEV 392 (393)
T ss_pred eEEEEEEe
Confidence 44555543
No 159
>PRK04262 hypothetical protein; Provisional
Probab=91.54 E-value=0.41 Score=47.46 Aligned_cols=81 Identities=16% Similarity=0.229 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCeEEEEccCCCCCCChHHHHHHHcCCCCCcceE-----EecCccchhHHHHHHHHHHHH
Q 015082 80 AVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISY-----NLGGMGCSAGLISIDLANNLL 154 (413)
Q Consensus 80 ~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lGl~~~~~~~-----~v~~~~C~~~~~al~~A~~~i 154 (413)
+...++++++|+++|++++|||.+++.... ..+-..++++||++++.... .+.+.++++..-+|..+..
T Consensus 209 ~~~~~~i~~~L~~~gl~~~dId~~v~Hq~n----~~~~~~~~~~Lgl~~ek~~~~~~~~~~GNt~sAsi~~~L~~~~~-- 282 (347)
T PRK04262 209 KHIISAAKGLMEKLGLKPSDYDYAVFHQPN----GKFPLRVAKMLGFTKEQVKPGLLTPYIGNTYSGSALLGLAAVLD-- 282 (347)
T ss_pred HHHHHHHHHHHHHhCcCHHHhceeecCCCc----hHHHHHHHHHcCCCHHHhhccchhhhhCChHHHHHHHHHHHHHH--
Confidence 456788999999999999999998887431 33456788899998543321 2333344555555544433
Q ss_pred HcCCCCeEEEEE
Q 015082 155 QVHPNSYALVIS 166 (413)
Q Consensus 155 ~~g~~~~vLVv~ 166 (413)
+..+.+++|+++
T Consensus 283 ~~~~Gd~vll~~ 294 (347)
T PRK04262 283 VAKPGDRILVVS 294 (347)
T ss_pred hCCCCCEEEEEe
Confidence 223445555554
No 160
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=91.44 E-value=0.23 Score=50.30 Aligned_cols=81 Identities=11% Similarity=-0.038 Sum_probs=49.4
Q ss_pred hhccccEEEecCCChHHHHHHHHhcCCCc--ccchhhHHHHh---hhcCCCcchHHHHHHHHHHcCCCCCCCeEEE-Eee
Q 015082 297 FKLAFEHFCIHAGGRAVLDELEKNLQLSD--WHMEPSRMTLY---RFGNTSSSSLWYELAYSEAKGRIKKGDRTWQ-IAF 370 (413)
Q Consensus 297 ~~~did~~i~hq~~~~~~~~i~~~lgi~~--e~~~~s~~~l~---~~Gn~~sasi~i~L~~~~~~g~l~~Gd~vll-~~~ 370 (413)
.++|||++-+|-.-....-...+.||+.. .++ ++.. -+||..+|+=...+.++.++=+-+.|.+.+. +..
T Consensus 312 ~~~DID~iei~dafa~~~l~~~e~lg~~~~~~pv----N~~GG~la~GHp~gasG~~~v~e~~~qL~~~~~~~g~~~~c~ 387 (400)
T PRK13359 312 TLDQFDVIELNEAFASQGLAVLRELGLADDDARV----NPNGGAIALGHPLGASGARLVTTALYQLERTGGRFALCTMCI 387 (400)
T ss_pred CHHHcCcCccCcHhHHHHHHHHHHcCCCCCCCCE----ECCCchhhcCCchhHHHHHHHHHHHHHHhhcCCCeEEEEEcc
Confidence 37899999988887766777788999843 444 3332 3899987777666666555322134445433 333
Q ss_pred ccchhhhhhhhh
Q 015082 371 GSGFKCNSAVWK 382 (413)
Q Consensus 371 G~G~~~~a~llr 382 (413)
|.|. .++++++
T Consensus 388 ~gG~-g~a~~ie 398 (400)
T PRK13359 388 GVGQ-GIAIAIE 398 (400)
T ss_pred cCCc-eeEEEEE
Confidence 4443 2445544
No 161
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=91.42 E-value=0.38 Score=48.51 Aligned_cols=84 Identities=6% Similarity=-0.075 Sum_probs=53.4
Q ss_pred hhccccEEEecCCChHHHHHHHHhcCCCcccchhhHHHHhhhcCCCcchHHHHHHHHHHcCCCCCCCeEEE-Eeeccchh
Q 015082 297 FKLAFEHFCIHAGGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQ-IAFGSGFK 375 (413)
Q Consensus 297 ~~~did~~i~hq~~~~~~~~i~~~lgi~~e~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~l~~Gd~vll-~~~G~G~~ 375 (413)
.++|||.+=+|-.-....-...+.||++.+++.. .--.-.+||..+|+=...+.++..+=+-+.|.+.+. +..|.|..
T Consensus 301 ~~~did~~ei~d~F~~~~l~~~e~lg~~~~pvN~-~GG~la~Ghp~gatG~~~v~e~~~qL~~~~~~~g~~~~c~~gg~g 379 (387)
T PRK07850 301 KIGDIDLVEINEAFASVVLSWAQVHEPDMDKVNV-NGGAIALGHPVGSTGARLITTALHELERTDKSTALITMCAGGALS 379 (387)
T ss_pred CHHHcCeeeecccchHHHHHHHHHcCCCCCCcCC-CCchhhcCCCcchhHHHHHHHHHHHHHhcCCCeEEEEEccccCce
Confidence 3689999999998877777778999998776632 111345899998887777666555322133444443 34444433
Q ss_pred hhhhhhh
Q 015082 376 CNSAVWK 382 (413)
Q Consensus 376 ~~a~llr 382 (413)
.+++|+
T Consensus 380 -~a~~~e 385 (387)
T PRK07850 380 -TGTIIE 385 (387)
T ss_pred -eEEEEE
Confidence 445554
No 162
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=91.42 E-value=0.32 Score=49.27 Aligned_cols=84 Identities=15% Similarity=0.039 Sum_probs=51.3
Q ss_pred hhccccEEEecCCChHHHHHHHHhcCCCcccchhhHHHHhhhcCCCcchHHHHHHHHHHcCCCCCCCe-EEEEeeccchh
Q 015082 297 FKLAFEHFCIHAGGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDR-TWQIAFGSGFK 375 (413)
Q Consensus 297 ~~~did~~i~hq~~~~~~~~i~~~lgi~~e~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~l~~Gd~-vll~~~G~G~~ 375 (413)
.++|||.+=+|-......-...+.||+..+++.. .--.-.+||..+|+=...+.++..+=+-+.|.+ |..+..|.|..
T Consensus 311 ~~~Did~~ei~d~fa~~~l~~~e~lg~~~~~vN~-~GG~~a~Ghp~gasG~~~~~~~~~qL~~~~g~~~v~~~c~~gg~g 389 (397)
T PRK06954 311 RAAEVDLFEINEAFAVVTMAAMKEHGLPHEKVNV-NGGACALGHPIGASGARILVTLIGALRARGGKRGVASLCIGGGEA 389 (397)
T ss_pred CHHHCCEEehhhHHHHHHHHHHHHhCCCcccCCc-CCChHHhcccHHHHHHHHHHHHHHHHHhcCCCeEEEEEccccchh
Confidence 3689999988887766555567889998887742 122445899998885555555444211134554 44455555543
Q ss_pred hhhhhhh
Q 015082 376 CNSAVWK 382 (413)
Q Consensus 376 ~~a~llr 382 (413)
.+++++
T Consensus 390 -~a~~~e 395 (397)
T PRK06954 390 -TAMGIE 395 (397)
T ss_pred -hEEEEE
Confidence 344443
No 163
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=91.28 E-value=0.22 Score=50.41 Aligned_cols=81 Identities=12% Similarity=-0.005 Sum_probs=48.3
Q ss_pred hhccccEEEecCCChHHHHHHHHhcCCCc--ccchhhHHHHh---hhcCCCcchHHHHHHHHHHcCCCCCCCeEE-EEee
Q 015082 297 FKLAFEHFCIHAGGRAVLDELEKNLQLSD--WHMEPSRMTLY---RFGNTSSSSLWYELAYSEAKGRIKKGDRTW-QIAF 370 (413)
Q Consensus 297 ~~~did~~i~hq~~~~~~~~i~~~lgi~~--e~~~~s~~~l~---~~Gn~~sasi~i~L~~~~~~g~l~~Gd~vl-l~~~ 370 (413)
.++|||++-+|-......-.+.+.||+.. +++ +... -+||..+++=...+.++.++=+-+.|.+.+ .+..
T Consensus 312 ~~~DID~~ei~D~f~~~~l~~~e~lG~~~~~~pv----N~~GG~la~GHp~gasG~~~~~e~~~qLr~~~~~~g~~~~c~ 387 (400)
T TIGR02430 312 SIDQFDVIELNEAFAAQALAVLRELGLADDDARV----NPNGGAIALGHPLGASGARLVLTALRQLERSGGRYALCTMCI 387 (400)
T ss_pred CHHHCCCcccCcHHHHHHHHHHHHcCCCCCCCeE----CCCCchHhccChHHHHHHHHHHHHHHHHHhcCCCEEEEEEcc
Confidence 36899999988887777777889999854 344 2322 389998885555554444421113445443 3444
Q ss_pred ccchhhhhhhhh
Q 015082 371 GSGFKCNSAVWK 382 (413)
Q Consensus 371 G~G~~~~a~llr 382 (413)
|.|.. .+++++
T Consensus 388 ~gG~g-~a~~~e 398 (400)
T TIGR02430 388 GVGQG-IALAIE 398 (400)
T ss_pred ccChh-hEEEEE
Confidence 44543 344444
No 164
>PRK06840 hypothetical protein; Validated
Probab=91.28 E-value=0.88 Score=44.80 Aligned_cols=81 Identities=19% Similarity=0.245 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCeEEEEccCCCCCCChHHHHHHHcCCCCCcce-E-EecCccchhHHHHHHHHHHHHHcC
Q 015082 80 AVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIIS-Y-NLGGMGCSAGLISIDLANNLLQVH 157 (413)
Q Consensus 80 ~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lGl~~~~~~-~-~v~~~~C~~~~~al~~A~~~i~~g 157 (413)
....++++++|+++|++++|||.++..... +..-..++++||++++... + +..+.+|++.+.+| ..+++++
T Consensus 237 ~~~~~~i~~~L~~~gl~~~did~~~~h~~~----~~~~~~~~~~Lgl~~~~~~~~~~~Gn~~sas~~~~L---~~~~~~~ 309 (339)
T PRK06840 237 PNFLKVIREALRKSGYTPKDIDYLAILHMK----RSAHIALLEGLGLTEEQAIYLDEYGHLGQLDQILSL---HLALEQG 309 (339)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECCcC----HHHHHHHHHHcCCCHHHeEeHHhccchhhhhHHHHH---HHHHHcC
Confidence 345689999999999999999998765431 2334568999999853321 1 22222333333344 3444444
Q ss_pred ---CCCeEEEEEE
Q 015082 158 ---PNSYALVISM 167 (413)
Q Consensus 158 ---~~~~vLVv~~ 167 (413)
+.+++|+++.
T Consensus 310 ~~~~Gd~ill~~~ 322 (339)
T PRK06840 310 KLKDGDLVVLVSA 322 (339)
T ss_pred CCCCCCEEEEEEE
Confidence 4577777764
No 165
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=91.27 E-value=0.24 Score=50.15 Aligned_cols=80 Identities=14% Similarity=0.024 Sum_probs=47.2
Q ss_pred hhccccEEEecCCChHHHHHHHHhcCCCcccchhhHHHHh---hhcCCCcch---HHHHHHHHHHcCCCCCCCeEE-EEe
Q 015082 297 FKLAFEHFCIHAGGRAVLDELEKNLQLSDWHMEPSRMTLY---RFGNTSSSS---LWYELAYSEAKGRIKKGDRTW-QIA 369 (413)
Q Consensus 297 ~~~did~~i~hq~~~~~~~~i~~~lgi~~e~~~~s~~~l~---~~Gn~~sas---i~i~L~~~~~~g~l~~Gd~vl-l~~ 369 (413)
.++|||.+-+|-.-....-...|.||+..+... .++.. .+||..+++ ..+.+.+.++. +.|.+.+ .+.
T Consensus 313 ~~~DId~~ei~D~f~~~~l~~~e~lg~~~~~~p--vN~~GG~la~Ghp~gasG~~~~~e~~~qLr~---~~~~~g~~~~c 387 (401)
T PRK09050 313 TIDQFDVIELNEAFAAQGLAVLRQLGLADDDAR--VNPNGGAIALGHPLGMSGARLVLTALHQLER---TGGRYALCTMC 387 (401)
T ss_pred CHHHCCccccCcHhHHHHHHHHHHcCCCCCCCC--EeCCCchHhcCCchhHHHHHHHHHHHHHHHh---cCCCeEEEEEc
Confidence 368999999998877666678899999543221 23332 389999988 44444444432 2344433 334
Q ss_pred eccchhhhhhhhh
Q 015082 370 FGSGFKCNSAVWK 382 (413)
Q Consensus 370 ~G~G~~~~a~llr 382 (413)
.|.|.. .+++++
T Consensus 388 ~~gG~g-~a~~~e 399 (401)
T PRK09050 388 IGVGQG-IALAIE 399 (401)
T ss_pred ccccce-eEEEEE
Confidence 444433 344444
No 166
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=91.19 E-value=0.24 Score=50.27 Aligned_cols=85 Identities=7% Similarity=-0.124 Sum_probs=51.1
Q ss_pred hhccccEEEecCCChHHHHHHHHhcCCCcccchhhHHHHhhhcCCCcchHHHHHHHHHHcCCCCCCCeEEEEeeccchhh
Q 015082 297 FKLAFEHFCIHAGGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKC 376 (413)
Q Consensus 297 ~~~did~~i~hq~~~~~~~~i~~~lgi~~e~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~l~~Gd~vll~~~G~G~~~ 376 (413)
.++|||.+=+|-......-...|.||+.++++.. .--.--+||..+++-...+.++...=+-+.|-+.|...-++|-.-
T Consensus 319 ~~~did~~ei~d~f~~~~l~~le~lg~~~~pvN~-~GG~l~~Ghp~gasg~~~~~~~~~qL~~~~~~~g~~~~~~~gg~g 397 (406)
T PRK07851 319 SIDDIDLVEINEAFAAQVLPSARELGIDEDKLNV-SGGAIALGHPFGMTGARITTTLLNNLQTHDKTFGLETMCVGGGQG 397 (406)
T ss_pred CHHHCCeehhhhHHHHHHHHHHHHhCCCccccCC-CCChHhhcCcHHHHHHHHHHHHHHHHHhcCCCeEEEEEccccChh
Confidence 3689999877776655555566899997665532 122345899999888877777665322234444444333333333
Q ss_pred hhhhhh
Q 015082 377 NSAVWK 382 (413)
Q Consensus 377 ~a~llr 382 (413)
.+++++
T Consensus 398 ~a~~~e 403 (406)
T PRK07851 398 MAMVLE 403 (406)
T ss_pred hEEEEE
Confidence 445554
No 167
>PRK08256 lipid-transfer protein; Provisional
Probab=90.49 E-value=0.64 Score=46.94 Aligned_cols=76 Identities=17% Similarity=0.031 Sum_probs=51.3
Q ss_pred hhccccEEEecCCChHHHHHHHHhcCCCcc------------------cchhhHHHHhhhcCCCcchHHHHHHHHHHc--
Q 015082 297 FKLAFEHFCIHAGGRAVLDELEKNLQLSDW------------------HMEPSRMTLYRFGNTSSSSLWYELAYSEAK-- 356 (413)
Q Consensus 297 ~~~did~~i~hq~~~~~~~~i~~~lgi~~e------------------~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~-- 356 (413)
.++|||.+-+|.......-...|.||+.++ .+..+-- .-.+||...|+=...+.++..+
T Consensus 280 ~~~DiD~~ei~d~f~~~~l~~le~lg~~~~Ge~~~~~~~G~~~~~G~~pvN~~GG-~ls~Ghp~gasG~~~~~e~~~QL~ 358 (391)
T PRK08256 280 GPEDIDVVELHDCFSANELLTYEALGLCPEGEAEKFIDDGDNTYGGRWVVNPSGG-LLSKGHPLGATGLAQCAELTWQLR 358 (391)
T ss_pred CHHHCCEEeeccCCcHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeeCCCCc-cccCCCCccHHHHHHHHHHHHHhc
Confidence 378999999999998888899999999876 3311000 1237999877766666665552
Q ss_pred C-----CCCCCCeEEEEeeccc
Q 015082 357 G-----RIKKGDRTWQIAFGSG 373 (413)
Q Consensus 357 g-----~l~~Gd~vll~~~G~G 373 (413)
| .++.....+..+.|.|
T Consensus 359 g~ag~~Qv~~~~~~l~~~~G~~ 380 (391)
T PRK08256 359 GTAGARQVEGARLALQHNLGLG 380 (391)
T ss_pred CCcCCCcCCccceEEEeccccc
Confidence 2 2233445666777754
No 168
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=90.43 E-value=0.97 Score=43.97 Aligned_cols=84 Identities=11% Similarity=0.134 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCcCeEEEEccCCCCCCChHHHHHHHcCCCCCcceEE---ecCccchhHHHHHHHHHHH
Q 015082 77 EAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYN---LGGMGCSAGLISIDLANNL 153 (413)
Q Consensus 77 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~---v~~~~C~~~~~al~~A~~~ 153 (413)
...+...++.+++|+++|++++|||.++.... .+..-..+.+.||++++..... ..+.+|+..+..| ..+
T Consensus 216 ~~~~~~~~~i~~~l~~~g~~~~di~~~~~h~~----~~~~~~~~~~~lg~~~~~~~~~~~~~Gn~~~a~~~~~L---~~~ 288 (319)
T PRK09352 216 FAVRELAKVAREALEAAGLTPEDIDWLVPHQA----NLRIIDATAKKLGLPMEKVVVTVDKYGNTSAASIPLAL---DEA 288 (319)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHhCCCHHHhhhhHHhhCCHHHHHHHHHH---HHH
Confidence 34455677999999999999999999987643 2334567889999985332211 2212333333334 444
Q ss_pred HHcC---CCCeEEEEEE
Q 015082 154 LQVH---PNSYALVISM 167 (413)
Q Consensus 154 i~~g---~~~~vLVv~~ 167 (413)
++.| +.+++|+++.
T Consensus 289 ~~~g~~~~Gd~vll~s~ 305 (319)
T PRK09352 289 VRDGRIKRGDLVLLEGF 305 (319)
T ss_pred HHcCCCCCCCEEEEEEE
Confidence 4544 3577877774
No 169
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=90.26 E-value=0.49 Score=46.36 Aligned_cols=60 Identities=18% Similarity=0.232 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCCcCeEEEEccCCCCCCChHHHHHHHcCCCCCcceEEec
Q 015082 73 EARKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLG 136 (413)
Q Consensus 73 ~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~v~ 136 (413)
+..+.+..+..++++++|++++++++|||.++..... ..+-..++++||++++.....+.
T Consensus 216 ~vfk~av~~~~~~~~~~L~~~~l~~~dId~~vpHQan----~ri~~~i~~~l~~~~~k~~~~~~ 275 (323)
T COG0332 216 EVFKFAVRAMPKAIEEVLEKAGLTPEDIDWFVPHQAN----LRIIEAIAKKLGIPEEKVVVTVD 275 (323)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEcccccc----HHHHHHHHHHcCCCHHHHhhHHH
Confidence 4566789999999999999999999999999876541 33457788999998655555544
No 170
>PLN02287 3-ketoacyl-CoA thiolase
Probab=89.88 E-value=0.55 Score=48.39 Aligned_cols=91 Identities=13% Similarity=0.025 Sum_probs=56.0
Q ss_pred hhccccEEEecCCChHHHHHHHHhcCCCcccchhhHHHHhhhcCCCcchHHHHHHHHHHcCCCCCC--CeEE-EEeeccc
Q 015082 297 FKLAFEHFCIHAGGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKG--DRTW-QIAFGSG 373 (413)
Q Consensus 297 ~~~did~~i~hq~~~~~~~~i~~~lgi~~e~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~l~~G--d~vl-l~~~G~G 373 (413)
.++|||.+=+|-.-....-...|.||+.++++.. .--.--+||..+|+=...+.+++.+=+-+.| .+.+ .+..|.|
T Consensus 347 ~~~DID~~Ei~daFa~~~l~~~e~lG~~~~pvN~-sGG~la~GHp~gAsG~~~v~~l~~qL~~~~~~~~~gl~~~c~ggG 425 (452)
T PLN02287 347 ELDDIDLFEINEAFASQFVYCCKKLGLDPEKVNV-NGGAIALGHPLGATGARCVATLLHEMKRRGKDCRFGVVSMCIGTG 425 (452)
T ss_pred CHHHCCEEEecchHHHHHHHHHHHcCCCccccCC-CCcHHhccCcHHHHHHHHHHHHHHHHHhcCCCCCeeEEEEccccC
Confidence 3689999989976655555567899998777632 1123348999887766666555542111223 3433 3344444
Q ss_pred hhhhhhhhhhccccCC
Q 015082 374 FKCNSAVWKALRSINS 389 (413)
Q Consensus 374 ~~~~a~llr~~~~~~~ 389 (413)
. ..++++++.+.+..
T Consensus 426 ~-g~a~~ie~~~~~~~ 440 (452)
T PLN02287 426 M-GAAAVFERGDSVDE 440 (452)
T ss_pred c-eeEEEEEecCchhh
Confidence 3 46788888886543
No 171
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=89.21 E-value=0.79 Score=46.50 Aligned_cols=85 Identities=11% Similarity=0.006 Sum_probs=50.1
Q ss_pred hhccccEEEecCCChHHHHHHHHhcCCCc---ccchhhHHHHhhhcCCCcchHHHHHHHHHHcCCCCCCCeEEE-Eeecc
Q 015082 297 FKLAFEHFCIHAGGRAVLDELEKNLQLSD---WHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQ-IAFGS 372 (413)
Q Consensus 297 ~~~did~~i~hq~~~~~~~~i~~~lgi~~---e~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~l~~Gd~vll-~~~G~ 372 (413)
.++|||.+-+|-.-....-...|.||+.. +++.. .--.--+||..+|+=...+.+++++=+-+.|.+.+. +..|.
T Consensus 314 ~~~Did~~ei~d~f~~~~l~~~e~lg~~~~~~~~vN~-~GG~la~Ghp~gatG~~~v~e~~~qL~~~~~~~gl~~~c~~g 392 (404)
T PRK06205 314 TLDDIDLIELNEAFAAQVLAVLKEWGFGADDEERLNV-NGSGISLGHPVGATGGRILATLLRELQRRQARYGLETMCIGG 392 (404)
T ss_pred CHHHCCEeeeccHHHHHHHHHHHHhCcCcccCCCcCC-CCCHHhhCCChhhhHHHHHHHHHHHHHhcCCCeEEEEEeccC
Confidence 36899999999988777777788999876 34421 111335899988776666655554211123344333 33344
Q ss_pred chhhhhhhhhh
Q 015082 373 GFKCNSAVWKA 383 (413)
Q Consensus 373 G~~~~a~llr~ 383 (413)
|. ..+++|++
T Consensus 393 g~-g~a~~~e~ 402 (404)
T PRK06205 393 GQ-GLAAVFER 402 (404)
T ss_pred Ch-hhEEEEEe
Confidence 43 34555543
No 172
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=88.96 E-value=1.1 Score=45.88 Aligned_cols=86 Identities=9% Similarity=-0.066 Sum_probs=50.6
Q ss_pred hhccccEEEecCCChHHHHHHHHhcC-----------------CCcccchhhHHHHhhhcCCCcchHHHHHHHHHHcCCC
Q 015082 297 FKLAFEHFCIHAGGRAVLDELEKNLQ-----------------LSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRI 359 (413)
Q Consensus 297 ~~~did~~i~hq~~~~~~~~i~~~lg-----------------i~~e~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~l 359 (413)
.++|||.+=+|-.-....-...+.|| ++.+++.. .-=+--+||..+|+=...+.++.++=+-
T Consensus 325 ~~~DiD~~Ei~d~Fa~~~l~~~e~l~~~~~~~~~~g~~~~~G~~~~~pvN~-~GG~la~GhP~gasG~~~~~e~~~qLrg 403 (428)
T PRK08963 325 TLADLTLIDMHEAFAAQTLANLQMFASERFAREKLGRSQAIGEVDMSKFNV-LGGSIAYGHPFAATGARMITQTLHELRR 403 (428)
T ss_pred CHHHCCEEEEccccHHHHHHHHHHhcCchhhhhcccccccCCCCCCCccCC-CCCHHhcCCCccccHHHHHHHHHHHHhh
Confidence 36899999999987655555555553 44344421 0112347999888777777666653222
Q ss_pred CCCCeEEEEeeccchhhhhhhhhh
Q 015082 360 KKGDRTWQIAFGSGFKCNSAVWKA 383 (413)
Q Consensus 360 ~~Gd~vll~~~G~G~~~~a~llr~ 383 (413)
+.|.+.+...-++|-...+++|++
T Consensus 404 ~~g~~gl~~~c~ggG~g~a~~ie~ 427 (428)
T PRK08963 404 RGGGLGLTTACAAGGLGAAMVLEV 427 (428)
T ss_pred cCCCEEEEEEccccChhhEEEEEe
Confidence 456776654444443445566653
No 173
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=88.61 E-value=0.89 Score=45.16 Aligned_cols=87 Identities=14% Similarity=0.154 Sum_probs=47.9
Q ss_pred HHHHHHHHHHhCCCCCCCcCeEEEE-ccCCCCCCChHHHHHHHcCCC-CCcceE----EecCccchhHHHHHHHHHHHHH
Q 015082 82 MFGAIDELFAKTSVKPKDIGILIVN-CSLFNPTPSLSAMVINHYKLR-GNIISY----NLGGMGCSAGLISIDLANNLLQ 155 (413)
Q Consensus 82 a~~Aa~~aL~~ag~~~~~Id~li~~-s~~~~~~p~~a~~v~~~lGl~-~~~~~~----~v~~~~C~~~~~al~~A~~~i~ 155 (413)
..++.+++|+++|++++|||.|+.. +...+.....+..+...+|-. ...+.. .+.+.+.+++...+..+...++
T Consensus 236 l~~ai~~AL~~agl~~~dId~v~ah~~gt~~~d~~e~~A~~~~f~~~~~~~~~~~~k~~~Gh~~aAaG~~~~~~a~~~~~ 315 (348)
T PRK06147 236 LTQAIRAALAEAGCGLEDMDYRIADLNGEQYRFKEAALAEMRLFRVRKEFFDLWHPAECIGEIGAAIGPALLGVALAASR 315 (348)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEcCCCCCccchHHHHHHHHHHhhhccCCCceecchHhhcchHHHHHHHHHHHHHHHHH
Confidence 3689999999999999999998865 432111112223333334321 011111 1222233344444445555666
Q ss_pred cC--CCCeEEEEEEc
Q 015082 156 VH--PNSYALVISME 168 (413)
Q Consensus 156 ~g--~~~~vLVv~~e 168 (413)
.| +..++||.+++
T Consensus 316 ~g~~~g~~~L~~s~~ 330 (348)
T PRK06147 316 KGYGPGPNVLCHLSD 330 (348)
T ss_pred cCcCCCCcEEEEecC
Confidence 66 45788888743
No 174
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=88.61 E-value=1.8 Score=42.18 Aligned_cols=78 Identities=14% Similarity=0.091 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCeEEEEcc-CCCCCCChHHHHHHHcCCC---CCcceEEecCccchhHHHHHHHHHHHHH
Q 015082 80 AVMFGAIDELFAKTSVKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLR---GNIISYNLGGMGCSAGLISIDLANNLLQ 155 (413)
Q Consensus 80 ~la~~Aa~~aL~~ag~~~~~Id~li~~s~-~~~~~p~~a~~v~~~lGl~---~~~~~~~v~~~~C~~~~~al~~A~~~i~ 155 (413)
+-..++++++|+++|++++|||.++.... ................+.. .....-.+.+.++++++..|..+...++
T Consensus 205 ~~~~~~i~~al~~agl~~~did~~~~h~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~G~~~aas~~~~l~~~~~~~~ 284 (332)
T cd00825 205 EGLARAAKEALAVAGLTVWDIDYLVAHGTGTPIGDVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAVVLAVDEAVLMLE 284 (332)
T ss_pred HHHHHHHHHHHHHcCCCHhHCCEEEccCCCCCCCCHHHHHHHHHHhCCCCceeECCCcccccchhHhHHHHHHHHHHHHh
Confidence 33468899999999999999999997743 2221111122222233321 0011123344566677777777766665
Q ss_pred cC
Q 015082 156 VH 157 (413)
Q Consensus 156 ~g 157 (413)
.+
T Consensus 285 ~~ 286 (332)
T cd00825 285 HG 286 (332)
T ss_pred cC
Confidence 54
No 175
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=88.23 E-value=0.94 Score=45.72 Aligned_cols=57 Identities=5% Similarity=-0.122 Sum_probs=41.5
Q ss_pred hccccEEEecCCChHHHHHHHHhcCCCcccchhhHHHHhhhcCCCcchHHHHHHHHHH
Q 015082 298 KLAFEHFCIHAGGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEA 355 (413)
Q Consensus 298 ~~did~~i~hq~~~~~~~~i~~~lgi~~e~~~~s~~~l~~~Gn~~sasi~i~L~~~~~ 355 (413)
++|||.+=+|-.-....-...|.||++.+++..+-- +--+||-..|+=...+.++..
T Consensus 302 ~~DiDv~Ei~daFa~~~l~~le~lgl~g~~vN~~GG-~la~GHP~GatG~~~~~~l~~ 358 (388)
T PRK06366 302 IDYYDLVEHNEAFSIASIIVRDQLKIDNERFNVNGG-AVAIGHPIGNSGSRIIVTLIN 358 (388)
T ss_pred HHHcceeeccchhHHHHHHHHHHhCCCCCccCCCCc-hhhhCCCcCCCHHHHHHHHHH
Confidence 689999999999888888889999999887742111 234799877775555554444
No 176
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=88.14 E-value=1.4 Score=44.06 Aligned_cols=86 Identities=12% Similarity=0.165 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCcCeEEEEccCCCCCCChHHHHHHH-cCCCC--Cc-c-eE-EecCccchhHHHHHHH
Q 015082 76 KEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINH-YKLRG--NI-I-SY-NLGGMGCSAGLISIDL 149 (413)
Q Consensus 76 ~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~-lGl~~--~~-~-~~-~v~~~~C~~~~~al~~ 149 (413)
+.+.+...++++++|+++|++++|||.+++.... ..+-..+.++ ||+.. +. + .+ ...+.+|++...+|..
T Consensus 267 ~~~~~~~~~~i~~~L~~~gl~~~dId~~~~Hq~~----~~~~d~~~~~llg~~~~~~~~~~~~~~~GNt~sasi~~~L~~ 342 (372)
T PRK07515 267 KEVCPMVAEHIVEHLAENGLTPADVKRFWLHQAN----INMNQLIGKKVLGRDATPEEAPVILDEYANTSSAGSIIAFHK 342 (372)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCC----HHHHHHHHHHhccCCCChhhceEeHHhcCCchhhHHHHHHHH
Confidence 4567778899999999999999999999987542 1122234455 56532 11 1 11 2233455666666666
Q ss_pred HHHHHHcCCCCeEEEEEE
Q 015082 150 ANNLLQVHPNSYALVISM 167 (413)
Q Consensus 150 A~~~i~~g~~~~vLVv~~ 167 (413)
+...+ .+.+++|+++.
T Consensus 343 ~~~~~--~~Gd~vll~~~ 358 (372)
T PRK07515 343 HSDDL--AAGDLGVICSF 358 (372)
T ss_pred HhccC--CCCCEEEEEEe
Confidence 54333 34577777764
No 177
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=87.29 E-value=0.91 Score=45.88 Aligned_cols=53 Identities=9% Similarity=-0.081 Sum_probs=32.2
Q ss_pred hccccEEEecCCChHHHHHHHHhcCCCcccchhhHHHHhhhcCCCcchHHHHHH
Q 015082 298 KLAFEHFCIHAGGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELA 351 (413)
Q Consensus 298 ~~did~~i~hq~~~~~~~~i~~~lgi~~e~~~~s~~~l~~~Gn~~sasi~i~L~ 351 (413)
++|||++=+|-.-....-...+.|+++..++.. .-..--+||..+|+=.+.+.
T Consensus 307 p~DID~~ei~dafa~~~l~~~~~l~~~~~~vN~-sGg~~a~GHplgAtG~~~~~ 359 (392)
T PRK06633 307 VNDLEVIEVNEAFAAQSIYVNREMKWDMEKVNI-NGGAIAIGHPIGASGGRVLI 359 (392)
T ss_pred HHHcCeeehhhHHHHHHHHHHhhhCCCccccCC-CCchHhhCCcHHHHHHHHHH
Confidence 689999988854322222235778877666532 22344589998887433333
No 178
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=86.82 E-value=2.1 Score=43.10 Aligned_cols=85 Identities=11% Similarity=-0.109 Sum_probs=50.7
Q ss_pred hhccccEEEecCCChHHHHHHHHhcCC-Cc--ccchhhHHHHhhhcCCCcchHHHHHHHHHHc-CCCCCCCeEEEEeecc
Q 015082 297 FKLAFEHFCIHAGGRAVLDELEKNLQL-SD--WHMEPSRMTLYRFGNTSSSSLWYELAYSEAK-GRIKKGDRTWQIAFGS 372 (413)
Q Consensus 297 ~~~did~~i~hq~~~~~~~~i~~~lgi-~~--e~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~-g~l~~Gd~vll~~~G~ 372 (413)
.++|||.+=+|-.-....-...|.||+ ++ +++..+- -.--+||...|+=...+.++++. ++ +.+.+.+....|+
T Consensus 296 ~p~DId~~Ei~daFa~~~l~~~e~lg~~~~g~~~vN~~G-G~la~GhP~GATG~r~v~~l~~~l~~-~~~~~Gl~~~~~g 373 (385)
T TIGR02445 296 SISDIDVFELNEAFAAQALPCLKDLGLLDKMDEKVNLNG-GAIALGHPLGCSGARISTTLLNLMEQ-KDATFGLATMCIG 373 (385)
T ss_pred CHHHcCEEEEccccHHHHHHHHHHcCCCCCCCCCcCCCC-chhhcCCCccccHHHHHHHHHHHHHh-cCCCeEEEEEecc
Confidence 368999999999988888888899998 33 4553211 12347888777655444444432 22 3344555544444
Q ss_pred chhhhhhhhhh
Q 015082 373 GFKCNSAVWKA 383 (413)
Q Consensus 373 G~~~~a~llr~ 383 (413)
|-...+++|++
T Consensus 374 ~g~g~a~~~e~ 384 (385)
T TIGR02445 374 LGQGIATVFER 384 (385)
T ss_pred cChhheEEEEe
Confidence 44445555543
No 179
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=86.77 E-value=1.6 Score=43.32 Aligned_cols=88 Identities=15% Similarity=0.103 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHHHHHhC--CCCCCCcCeEEEEccCCCCCCChHHHHHHHcCCCCCcc------eEEecCccchhHHHHH
Q 015082 76 KEAEAVMFGAIDELFAKT--SVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNII------SYNLGGMGCSAGLISI 147 (413)
Q Consensus 76 ~~~~~la~~Aa~~aL~~a--g~~~~~Id~li~~s~~~~~~p~~a~~v~~~lGl~~~~~------~~~v~~~~C~~~~~al 147 (413)
+.+.+...++++++|+++ |++++|||.+++.... ..+-..++++||++++.. .-+..+.++++...+|
T Consensus 255 ~~~~~~~~~~i~~~L~~~~~g~~~~did~~~~H~~~----~~i~~~v~~~lgl~~~~~~~s~~~l~~~GN~~sasi~~~L 330 (361)
T cd00831 255 RLVEKNLERVLRKLLARLGIGLFKLAFDHWCVHPGG----RAVLDAVEKALGLSPEDLEASRMVLRRYGNMSSSSVLYVL 330 (361)
T ss_pred HHHHHHHHHHHHHHhccccCCCccccceEEEECCCC----hHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhccHHHHH
Confidence 345566778899999999 9999999999887542 233456889999985321 1233334555555666
Q ss_pred HHHHHHHHcCCCCeEEEEEE
Q 015082 148 DLANNLLQVHPNSYALVISM 167 (413)
Q Consensus 148 ~~A~~~i~~g~~~~vLVv~~ 167 (413)
..+..--+-.+.+++|+++.
T Consensus 331 ~~~~~~g~~~~Gd~vll~~~ 350 (361)
T cd00831 331 AYMEAKGRVKRGDRGLLIAF 350 (361)
T ss_pred HHHHHhCCCCCCCEEEEEEE
Confidence 54433111124577877774
No 180
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=86.53 E-value=3 Score=38.74 Aligned_cols=87 Identities=15% Similarity=0.072 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCeEEEEcc-CCCCCCChHHHHHHHcCCC---CCcceEEecCccchhHHHHHHHHHHHHH
Q 015082 80 AVMFGAIDELFAKTSVKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLR---GNIISYNLGGMGCSAGLISIDLANNLLQ 155 (413)
Q Consensus 80 ~la~~Aa~~aL~~ag~~~~~Id~li~~s~-~~~~~p~~a~~v~~~lGl~---~~~~~~~v~~~~C~~~~~al~~A~~~i~ 155 (413)
+...++++++|+++|++++|||.++.... +...............+.. .....-.+.+.++++++..|..+...++
T Consensus 145 ~~~~~~i~~~l~~ag~~~~did~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~as~~~~l~~~~~~~~ 224 (254)
T cd00327 145 EGLARAARKALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDPDGVRSPAVSATLIMTGHPLGAAGLAILDELLLMLE 224 (254)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEccCCcCccccHHHHHHHHHHhCCCCCceeccccccccchHHHHHHHHHHHHHHHh
Confidence 34578899999999999999999887643 2211111111111111221 0111123333456666667766666565
Q ss_pred cC-------CCCeEEEEE
Q 015082 156 VH-------PNSYALVIS 166 (413)
Q Consensus 156 ~g-------~~~~vLVv~ 166 (413)
.+ +.+++|+.+
T Consensus 225 ~~~~~~~~~~~~~~l~~~ 242 (254)
T cd00327 225 HEFIPPTPREPRTVLLLG 242 (254)
T ss_pred CCCcCCCCCCcCEEEEee
Confidence 54 445555554
No 181
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=85.00 E-value=2.3 Score=42.88 Aligned_cols=74 Identities=12% Similarity=-0.146 Sum_probs=46.0
Q ss_pred hhccccEEEecCCChHHHHHHHHhcCCCc---ccchhhHHHHhhhcCCCcchHHHHHHHHHHcCCCCCCCeEEEEeec
Q 015082 297 FKLAFEHFCIHAGGRAVLDELEKNLQLSD---WHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFG 371 (413)
Q Consensus 297 ~~~did~~i~hq~~~~~~~~i~~~lgi~~---e~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~l~~Gd~vll~~~G 371 (413)
.++|||.+=+|-.-....-...|.||+-+ +++.. .--.--+||..+|+=...+.+++++-+-+.+.+.+.-..|
T Consensus 298 ~~~DId~~El~d~F~~~~l~~~e~lg~~~~~~~~vN~-~GG~la~GhP~GAtG~~~v~~l~~~L~~~~~~~gl~~~~~ 374 (387)
T PRK08947 298 SISDIDVFELNEAFAAQSLPCLKDLGLLDKMDEKVNL-NGGAIALGHPLGCSGARISTTLLNLMERKDAQFGLATMCI 374 (387)
T ss_pred CHHHCCEEEecccchHHHHHHHHHcCCCCCCCCCcCC-CCchhhcCCCccccHHHHHHHHHHHHHhcCCCEEEEEEee
Confidence 36899999999998888888889999843 45431 1113347998777665555555543111333444443344
No 182
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=84.45 E-value=6.2 Score=39.31 Aligned_cols=97 Identities=14% Similarity=0.204 Sum_probs=63.8
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCcCeEEEEccCCCCCCChHHHHHHHcCCC-----CCcceE-EecCccchhHHHHHHH
Q 015082 76 KEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLR-----GNIISY-NLGGMGCSAGLISIDL 149 (413)
Q Consensus 76 ~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lGl~-----~~~~~~-~v~~~~C~~~~~al~~ 149 (413)
+.=.+....|+++.+++.|++++|.|.+++.+. .|-....++..+|.+ +..... .|....|++.+-+|
T Consensus 205 ~~Y~~~~~~a~~~~~~k~gls~~dfdy~vfH~P----~~k~~~ka~k~l~~~~e~v~~~l~~~~~vGN~YtgS~~L~L-- 278 (377)
T COG3425 205 PAYFKHVENAAKGYMEKTGLSPDDFDYIVFHQP----NGKFPKKAAKSLGFKEEQVKPGLVYPQRIGNTYTGSLLLGL-- 278 (377)
T ss_pred HHHHHHHHHHHHHHHHHhCCChhhhCeEEecCC----CCchHHHHHHHhCccHhhcCccchhhhhcCcccchhHHHHH--
Confidence 334556688999999999999999999998864 234456666667665 332222 35556677666555
Q ss_pred HHHHHHcC-CCCeEEEEEEccccCCCccCCCccchhhhcccccCceEEEEec
Q 015082 150 ANNLLQVH-PNSYALVISMENITLNWYFGNDRSKLVSNCLFRMGGAAILLSN 200 (413)
Q Consensus 150 A~~~i~~g-~~~~vLVv~~e~~s~~~~~~~d~~~~~~~~lfGDGAaA~ll~~ 200 (413)
|.-|=.+. +.+++|+++ ||.||++-..+-
T Consensus 279 as~L~~a~~~G~rIl~~S----------------------YGSGa~s~~fs~ 308 (377)
T COG3425 279 ASLLDNAKLPGDRILLFS----------------------YGSGAGSEAFSI 308 (377)
T ss_pred HHHHhhcCCCCCEEEEEe----------------------eCCCcceeEEEE
Confidence 23333334 567777665 688888866653
No 183
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=84.43 E-value=2.6 Score=42.50 Aligned_cols=57 Identities=7% Similarity=-0.182 Sum_probs=42.9
Q ss_pred hhccccEEEecCCChHHHHHHHHhcCCCcc----------------cchhhHHH---HhhhcCCCcchHHHHHHHHHH
Q 015082 297 FKLAFEHFCIHAGGRAVLDELEKNLQLSDW----------------HMEPSRMT---LYRFGNTSSSSLWYELAYSEA 355 (413)
Q Consensus 297 ~~~did~~i~hq~~~~~~~~i~~~lgi~~e----------------~~~~s~~~---l~~~Gn~~sasi~i~L~~~~~ 355 (413)
.++|||.+-+|-......-...|.||+.++ ++. .++ +--+||...|+=...+.++..
T Consensus 276 ~~~did~~e~~d~f~~~~~~~~e~lg~~~~G~~~~~~~~g~~~~~g~~p--vN~sGG~la~Ghp~gasG~~~~~e~~~ 351 (389)
T PRK07516 276 TLDDLSFVETHDCFTIAELIEYEAMGLAPPGQGARAIREGWTAKDGKLP--VNPSGGLKAKGHPIGATGVSMHVLAAM 351 (389)
T ss_pred CHHHCCEEEEecCCCHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCee--ecCCCCcccCCCCccHHHHHHHHHHHH
Confidence 378999999999998888888999999864 111 122 335899998888877777655
No 184
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....
Probab=83.35 E-value=0.9 Score=38.03 Aligned_cols=82 Identities=15% Similarity=0.065 Sum_probs=50.7
Q ss_pred hccccEEEecCCChHHHHHHHHhcCCCcccchhhHHHHhhhcCCCcchHHHHHHHHHHcCCCCCCCeEEE-Eeeccchhh
Q 015082 298 KLAFEHFCIHAGGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQ-IAFGSGFKC 376 (413)
Q Consensus 298 ~~did~~i~hq~~~~~~~~i~~~lgi~~e~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~l~~Gd~vll-~~~G~G~~~ 376 (413)
.+|||.|=+|-.-....-...+.||++++++...-- .--+||..+|+=...+.+++.+-+-+.|++.+. +..|.|..
T Consensus 39 ~~did~~Ei~EaFA~~~l~~~~~lg~~~~~vN~~GG-~la~GHP~gasG~r~~~~l~~~L~~~~~~~gla~~~~ggG~g- 116 (123)
T PF02803_consen 39 PDDIDVIEINEAFAAQVLAFLEALGLDPEKVNPNGG-ALALGHPLGASGARLVVELAHQLRRRGGRYGLAAICAGGGQG- 116 (123)
T ss_dssp GGGESEEEE--SBHHHHHHHHHHHTTGGGGBSTT---HHHH-BHTTTHHHHHHHHHHHHHHHHTTSEEEEEEEETTTEE-
T ss_pred ccccchhhccchhhhHHHHhhccccccccccCcccc-cccccccccccccchhhhhHHHHHHhchhhhhHHhcccceee-
Confidence 689999999999988888899999999999853222 234899988776655555544312234566544 33444433
Q ss_pred hhhhh
Q 015082 377 NSAVW 381 (413)
Q Consensus 377 ~a~ll 381 (413)
.++++
T Consensus 117 ~a~ll 121 (123)
T PF02803_consen 117 SAVLL 121 (123)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 34444
No 185
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=83.32 E-value=1.7 Score=44.06 Aligned_cols=57 Identities=11% Similarity=-0.097 Sum_probs=36.8
Q ss_pred hccccEEEecCCChHHHHHHHHhcCCCc--ccchhhHHHHhhhcCCCcchHHHHHHHHHH
Q 015082 298 KLAFEHFCIHAGGRAVLDELEKNLQLSD--WHMEPSRMTLYRFGNTSSSSLWYELAYSEA 355 (413)
Q Consensus 298 ~~did~~i~hq~~~~~~~~i~~~lgi~~--e~~~~s~~~l~~~Gn~~sasi~i~L~~~~~ 355 (413)
++|||.+=+|-.-....-...|.||+.. .++..+ -=.--+||..+|+=...+.+++.
T Consensus 313 ~~did~~ei~d~Fa~~~l~~~e~lg~~~~~~~vN~~-GG~la~GhP~gAtG~~~~~el~~ 371 (401)
T PRK08131 313 LDDMDIIEINEAFASQVLGCLKGLGVDFDDPRVNPN-GGAIAVGHPLGASGARLALTAAR 371 (401)
T ss_pred HHHCCeehhccHHHHHHHHHHHHcCCCCCCCCccCC-ccHHhcCCchhhhHHHHHHHHHH
Confidence 6899999999877655555778999853 344210 01224899987766555555444
No 186
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=83.27 E-value=3.3 Score=43.23 Aligned_cols=79 Identities=18% Similarity=0.125 Sum_probs=49.7
Q ss_pred HHHHHHHHHhCCCCCCCcCeEEEEccCCCCCCChHHHHHHHcCCCCC-cceEEecCccc--------hhHHHHHHHHHHH
Q 015082 83 FGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGN-IISYNLGGMGC--------SAGLISIDLANNL 153 (413)
Q Consensus 83 ~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lGl~~~-~~~~~v~~~~C--------~~~~~al~~A~~~ 153 (413)
..|+++|++.+|++++|||.+=+..+ +|.......+.||+.++ ...+.++| |. +.+++.+.-+...
T Consensus 295 ~~aa~~a~~~AGi~~~Did~~elydc----F~~~~~~~~E~LGl~~~g~~pvN~sG-Gl~s~G~P~~a~g~~~i~E~v~Q 369 (498)
T PRK08257 295 RAAGRRALALAGLGIDDIDAFDLYSC----FPSAVQVAARELGLDLDDPRPLTVTG-GLPFFGGPGNNYVTHAIAEMVER 369 (498)
T ss_pred HHHHHHHHHHhCCCHHHCCEEEeccC----CHHHHHHHHHHcCcCCCCCCCcCCCc-ChhhcCCchhhHHHHHHHHHHHH
Confidence 46999999999999999998865432 13333455678998743 12344442 32 2345555555666
Q ss_pred HHcCCCCeEEEEE
Q 015082 154 LQVHPNSYALVIS 166 (413)
Q Consensus 154 i~~g~~~~vLVv~ 166 (413)
|+..+.++.||.+
T Consensus 370 LRg~~~~~gLv~~ 382 (498)
T PRK08257 370 LRANPGRRGLVTA 382 (498)
T ss_pred HhhcCCCEEEEEC
Confidence 6655566676654
No 187
>COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=82.63 E-value=5 Score=37.13 Aligned_cols=57 Identities=18% Similarity=0.152 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCeEEEEccCCCCCC-ChHHHHHHHcCCCCCcceEEec
Q 015082 80 AVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTP-SLSAMVINHYKLRGNIISYNLG 136 (413)
Q Consensus 80 ~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p-~~a~~v~~~lGl~~~~~~~~v~ 136 (413)
+.....++++|.++|++..|||.|.+++.|+.... -++.-+++-|.+..+.+.+.|+
T Consensus 39 e~l~~~i~~ll~~~~~~~~dld~iav~~GPGSFTGlRIG~~~AkgLA~~l~iplvgvs 96 (220)
T COG1214 39 ERLMPMIDELLKEAGLSLQDLDAIAVAKGPGSFTGLRIGVAFAKGLALALNIPLVGVS 96 (220)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEccCCCcccchhhHHHHHHHHHHHcCCCEEEeC
Confidence 45578899999999999999999999998754333 3444444445444456778877
No 188
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=81.93 E-value=3.7 Score=40.82 Aligned_cols=50 Identities=20% Similarity=0.175 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCcCeEEEEccCCCCCCChHHHHHHHcCCCCCc
Q 015082 77 EAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNI 130 (413)
Q Consensus 77 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lGl~~~~ 130 (413)
.+.+....+++++|+++|++++|||.+++.... ..+-..+.++||++++.
T Consensus 239 ~~~~~~~~~i~~~L~~~gl~~~did~~v~HQ~~----~~i~~~i~~~Lgl~~ek 288 (353)
T PRK12880 239 MALECEPKSFKEILEFSKVDEKDIAFHLFHQSN----AYLVDCIKEELKLNDDK 288 (353)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCC----HHHHHHHHHHhCCCHHH
Confidence 355666788999999999999999999987642 33456889999998643
No 189
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=81.63 E-value=4.1 Score=40.70 Aligned_cols=76 Identities=16% Similarity=0.214 Sum_probs=46.8
Q ss_pred HHHHHHHHHHhCCCCCCCcCeEEEEccCCCCCCChHHHHHHHcCCCCCcceEEec--------CccchhHHHHHHHHHHH
Q 015082 82 MFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLG--------GMGCSAGLISIDLANNL 153 (413)
Q Consensus 82 a~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~v~--------~~~C~~~~~al~~A~~~ 153 (413)
...|++++|+++|++++|||.+..... .........+.||+++. .+..+ -.|++|.........++
T Consensus 260 ~~~a~~~al~~Agl~~~Did~~ei~ea----fa~~~~~~~e~lgl~~~--~vn~~GG~la~Ghp~GatG~~~~~~~~~ql 333 (361)
T PRK06690 260 PIFAVNKLLNEMNMKVEDIDYFEINEA----FASKVVACAKELQIPYE--KLNVNGGAIALGHPYGASGAMLVTRLFYQA 333 (361)
T ss_pred HHHHHHHHHHHcCCCHHHcCEeeecch----hHHHHHHHHHhcCCCch--hcccCCcHHhccCchhhhHHHHHHHHHHHH
Confidence 468999999999999999999876422 12334455678888632 22222 13555555555555555
Q ss_pred HHcCCCCeEEE
Q 015082 154 LQVHPNSYALV 164 (413)
Q Consensus 154 i~~g~~~~vLV 164 (413)
-+.| .++.++
T Consensus 334 ~~~~-~~~g~~ 343 (361)
T PRK06690 334 KRED-MKYGIA 343 (361)
T ss_pred HHhC-CCEEEE
Confidence 5433 445443
No 190
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=81.62 E-value=4.9 Score=40.44 Aligned_cols=41 Identities=15% Similarity=0.243 Sum_probs=29.1
Q ss_pred HHHHHHHHHhCCCCCCCcCeEEEEccCCCCCCChHHHHHHHcCCC
Q 015082 83 FGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLR 127 (413)
Q Consensus 83 ~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lGl~ 127 (413)
..|++++|+++|++++|||.+-..-. .........+.||+.
T Consensus 288 ~~a~~~a~~~Agi~~~did~~e~~d~----f~~~~~~~~e~lg~~ 328 (386)
T cd00751 288 VPAIPKALKRAGLTLDDIDLIEINEA----FAAQALACLKELGLD 328 (386)
T ss_pred HHHHHHHHHHcCCCHHHcCEEEeech----hHHHHHHHHHHhCCC
Confidence 58999999999999999998765411 112234445678875
No 191
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=81.06 E-value=3.8 Score=41.19 Aligned_cols=58 Identities=9% Similarity=-0.142 Sum_probs=39.9
Q ss_pred hhccccEEEecCCChHHHHHHHHhcCCCcc------------------cchhhHHHHhhhcCCCcchHHHHHHHHHH
Q 015082 297 FKLAFEHFCIHAGGRAVLDELEKNLQLSDW------------------HMEPSRMTLYRFGNTSSSSLWYELAYSEA 355 (413)
Q Consensus 297 ~~~did~~i~hq~~~~~~~~i~~~lgi~~e------------------~~~~s~~~l~~~Gn~~sasi~i~L~~~~~ 355 (413)
.++|||.+-+|-....+.-...|.||+.+. ++.. .-=+--+||...|+=...+.++..
T Consensus 273 ~~~DiD~~ei~d~ft~~~l~~le~lGl~~~G~~~~~~~~G~~~~~G~~pvN~-~GG~la~GhP~gatG~~~v~e~~~ 348 (385)
T PRK12578 273 TPNDIEVATVHDAFTIAEIMGYEDLGFTEKGKGGKFIEEGQSEKGGKVGVNL-FGGLKAKGHPLGATGLSMIYEITK 348 (385)
T ss_pred CHHHCCEEEecCcChHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeeCC-CCCcccCCCCccHHHHHHHHHHHH
Confidence 368999999999998888888899999752 2210 000223799887776666666544
No 192
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=80.98 E-value=5.2 Score=38.79 Aligned_cols=88 Identities=11% Similarity=0.117 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCcCeEEEEccCCCCCCChHHHHHHHcCCCCCcc-------eEEecCccchhHHHHH
Q 015082 75 RKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNII-------SYNLGGMGCSAGLISI 147 (413)
Q Consensus 75 ~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lGl~~~~~-------~~~v~~~~C~~~~~al 147 (413)
.+.+.+...++++++|+++|++ ++||.++...... +..-..+.++|++++... .-.+.+.+|++...+|
T Consensus 218 ~~~~~~~~~~~~~~~l~~~~~~-~~i~~~~~h~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~Gn~~sa~~~~~L 293 (324)
T cd00827 218 FEAAHKLIAKVVRKALDRAGLS-EDIDYFVPHQPNG---KKILEAVAKKLGGPPEKASQTRWILLRRVGNMYAASILLGL 293 (324)
T ss_pred HHHHhHHHHHHHHHHHHHcccc-cccceeeccCchH---HHHHHHHHHHccchHhhhccchhhHHHHhCchHHHHHHHHH
Confidence 4456777889999999999999 9999877665321 155678888999752111 1223334455555555
Q ss_pred HHHHHHHHcC---CCCeEEEEEEcc
Q 015082 148 DLANNLLQVH---PNSYALVISMEN 169 (413)
Q Consensus 148 ~~A~~~i~~g---~~~~vLVv~~e~ 169 (413)
..+ ++.+ +.+++|+++...
T Consensus 294 ~~~---~~~~~~~~Gd~vl~~~~G~ 315 (324)
T cd00827 294 ASL---LESGKLKAGDRVLLFSYGS 315 (324)
T ss_pred HHH---HhcCCCCCCCEEEEEEecc
Confidence 433 4444 357888887543
No 193
>PLN03169 chalcone synthase family protein; Provisional
Probab=80.42 E-value=6.7 Score=39.60 Aligned_cols=89 Identities=13% Similarity=0.199 Sum_probs=54.4
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCcCeEEEEccCCCCCCChHHHHHHHcCCCCCcce------EEecCccchhHHHHHHHH
Q 015082 77 EAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIIS------YNLGGMGCSAGLISIDLA 150 (413)
Q Consensus 77 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lGl~~~~~~------~~v~~~~C~~~~~al~~A 150 (413)
-+.+-....++++|+++|++++|||.+.+...+. ...+-..++++||++++... -+..++++++...+|+.+
T Consensus 278 ~~~~~~~~~i~~~L~~~gl~~~did~~~~v~Hq~--n~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtsSasip~~L~~~ 355 (391)
T PLN03169 278 KIEDNIEGFCKKLMKKAGLVEKDYNDLFWAVHPG--GPAILNRLEKKLKLAPEKLECSRRALMDYGNVSSNTIVYVLEYM 355 (391)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCcceEEecCC--CHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchHhHHHHHHHHH
Confidence 3455556678999999999999999554433322 24466788999999854332 234445666666677555
Q ss_pred HHH--HH-cCCCCeEEEEEE
Q 015082 151 NNL--LQ-VHPNSYALVISM 167 (413)
Q Consensus 151 ~~~--i~-~g~~~~vLVv~~ 167 (413)
..- ++ .++.+++|+++.
T Consensus 356 ~~~~~~~~~~~gd~~ll~af 375 (391)
T PLN03169 356 REELKKKGEEDEEWGLILAF 375 (391)
T ss_pred HHhhcccCCCCCcEEEEEEE
Confidence 421 11 113467776663
No 194
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=79.71 E-value=3.9 Score=41.88 Aligned_cols=57 Identities=5% Similarity=-0.109 Sum_probs=36.3
Q ss_pred hccccEEEecCCChHHHHHHHHhcC-----------------CCcccchhhHHHHhhhcCCCcchHHHHHHHHHH
Q 015082 298 KLAFEHFCIHAGGRAVLDELEKNLQ-----------------LSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEA 355 (413)
Q Consensus 298 ~~did~~i~hq~~~~~~~~i~~~lg-----------------i~~e~~~~s~~~l~~~Gn~~sasi~i~L~~~~~ 355 (413)
++|||.+=+|-.-....-...|.|| ++.+++..+- =.--+||...|+=...+.++.+
T Consensus 328 ~~Did~~Ei~daFa~~~l~~~e~lg~~~~~~~~~g~~~~~G~~~~~pvN~~G-G~la~GhP~gatG~~~v~e~~~ 401 (430)
T TIGR02446 328 LSDLTLIDMHEAFAAQTLANVQMFASDKFAQENLGRSKAMGEIDMSKFNVLG-GSIAYGHPFAATGARMITQTLR 401 (430)
T ss_pred HHHCCEEEeccccHHHHHHHHHHhcCcchhhhcccccccCCCCCCCccCCCC-CHHhcCCCccccHHHHHHHHHH
Confidence 6899999999987666556666675 4444442100 1234799987776666655554
No 195
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....
Probab=79.15 E-value=3.4 Score=34.58 Aligned_cols=75 Identities=20% Similarity=0.336 Sum_probs=43.8
Q ss_pred HHHHHHHHHhCCCCCCCcCeEEEEccCCCCCCChHHHHHHHcCCCCCcceEEecC--------ccchhHHHHHHHHHHHH
Q 015082 83 FGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGG--------MGCSAGLISIDLANNLL 154 (413)
Q Consensus 83 ~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~--------~~C~~~~~al~~A~~~i 154 (413)
..|++++|+++|++++|||.+=+.-. +....-...+.||+++ ..+.++| .||+|....++.+.++-
T Consensus 25 ~~A~~~al~~ag~~~~did~~Ei~Ea----FA~~~l~~~~~lg~~~--~~vN~~GG~la~GHP~gasG~r~~~~l~~~L~ 98 (123)
T PF02803_consen 25 VPAARKALERAGLTPDDIDVIEINEA----FAAQVLAFLEALGLDP--EKVNPNGGALALGHPLGASGARLVVELAHQLR 98 (123)
T ss_dssp HHHHHHHHHHHT--GGGESEEEE--S----BHHHHHHHHHHHTTGG--GGBSTT--HHHH-BHTTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCccccchhhccch----hhhHHHHhhccccccc--cccCcccccccccccccccccchhhhhHHHHH
Confidence 68999999999999999998765522 1233455667788863 3344442 24455555555555555
Q ss_pred HcCCCCeEEE
Q 015082 155 QVHPNSYALV 164 (413)
Q Consensus 155 ~~g~~~~vLV 164 (413)
..+ .++.++
T Consensus 99 ~~~-~~~gla 107 (123)
T PF02803_consen 99 RRG-GRYGLA 107 (123)
T ss_dssp HHT-TSEEEE
T ss_pred Hhc-hhhhhH
Confidence 443 455443
No 196
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=78.78 E-value=7.1 Score=38.90 Aligned_cols=43 Identities=9% Similarity=0.094 Sum_probs=31.3
Q ss_pred HHHHHHHHHHhCCCCCCCcCeEEEEccCCCCCCChHHHHHHHcCCCC
Q 015082 82 MFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRG 128 (413)
Q Consensus 82 a~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lGl~~ 128 (413)
...|++++|+++|++++|||.+-+... .+.......+.||+.+
T Consensus 253 ~~~a~~~al~~Agl~~~did~~ei~d~----F~~~~l~~~e~lGl~~ 295 (375)
T cd00829 253 ARLAARRAYKMAGITPDDIDVAELYDC----FTIAELLALEDLGFCE 295 (375)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecCc----ChHHHHHHHHHcCCCC
Confidence 467999999999999999998765432 1233455566788764
No 197
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=78.13 E-value=13 Score=37.52 Aligned_cols=75 Identities=21% Similarity=0.284 Sum_probs=44.6
Q ss_pred HHHHHHHHHhCCCCCCCcCeEEEEccCCCCCCChHHHHHHHcCCCCCcceEEecC--------ccchhHHHHHHHHHHHH
Q 015082 83 FGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGG--------MGCSAGLISIDLANNLL 154 (413)
Q Consensus 83 ~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~--------~~C~~~~~al~~A~~~i 154 (413)
..|++++|+++|++++|||.+=+.-. .+.......+.||+.+. .+..+| .||+|...-++.+.++-
T Consensus 295 ~~a~~~al~~Agl~~~dId~~e~~d~----f~~~~l~~~e~lg~~~~--~vN~~GG~la~Ghp~gatG~~~v~e~~~qL~ 368 (394)
T PRK06445 295 VPASKKALEKAGLSVKDIDLWEINEA----FAVVVLYAIKELGLDPE--TVNIKGGAIAIGHPLGATGARIVGTLARQLQ 368 (394)
T ss_pred HHHHHHHHHHcCCCHHHcCEEEeccc----chHHHHHHHHHhCCCcc--ccCCCCCHHHcCCCccchHHHHHHHHHHHHH
Confidence 67999999999999999998755421 12334555678887632 233332 24444444455555553
Q ss_pred HcCCCCeEEE
Q 015082 155 QVHPNSYALV 164 (413)
Q Consensus 155 ~~g~~~~vLV 164 (413)
..+ .++.|+
T Consensus 369 ~~~-~~~gl~ 377 (394)
T PRK06445 369 IKG-KDYGVA 377 (394)
T ss_pred hcC-CCEEEE
Confidence 322 344443
No 198
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=77.65 E-value=8.8 Score=38.75 Aligned_cols=41 Identities=12% Similarity=0.067 Sum_probs=29.9
Q ss_pred HHHHHHHHHhCCCCCCCcCeEEEEccCCCCCCChHHHHHHHcCCC
Q 015082 83 FGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLR 127 (413)
Q Consensus 83 ~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lGl~ 127 (413)
..|++++|+++|++++|||.+-+.-. .+.......+.||+.
T Consensus 294 ~~a~~~al~~agl~~~dId~~e~~d~----f~~~~~~~~e~lg~~ 334 (393)
T PRK05656 294 VSATRRCLDKAGWSLAELDLIEANEA----FAAQSLAVGKELGWD 334 (393)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEecCc----cHHHHHHHHHHhCCC
Confidence 58999999999999999998875321 223334556778875
No 199
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=77.09 E-value=5.9 Score=40.01 Aligned_cols=57 Identities=14% Similarity=-0.074 Sum_probs=39.9
Q ss_pred hccccEEEecCCChHHHHHHHHhcCCCc------------------ccchhhHHHHhhhcCCCcchHHHHHHHHHH
Q 015082 298 KLAFEHFCIHAGGRAVLDELEKNLQLSD------------------WHMEPSRMTLYRFGNTSSSSLWYELAYSEA 355 (413)
Q Consensus 298 ~~did~~i~hq~~~~~~~~i~~~lgi~~------------------e~~~~s~~~l~~~Gn~~sasi~i~L~~~~~ 355 (413)
++|||.+=+|-.-....-...|.||+.+ .++..+- =.--+||...|+=...+.++..
T Consensus 286 ~~DID~~Ei~d~Fa~~~l~~~e~lgl~~~g~~~~~~~~g~~~~~G~~pvN~~G-G~la~GhP~gAtG~~~~~e~~~ 360 (393)
T cd00826 286 IGDLDLIEAHDAFAANACATNEALGLCPEGQGGALVDRGDNTYGGKSIINPNG-GAIAIGHPIGASGAAICAELCF 360 (393)
T ss_pred HHHcCeeehhhhhHHHHHHHHHHhCCCcccchhhhhhcCccccCCcceECCCC-chhhcCCCccccHHHHHHHHHH
Confidence 6899999999998777778889999875 2332100 0224899987776666666554
No 200
>PRK09604 UGMP family protein; Validated
Probab=76.60 E-value=6.8 Score=38.63 Aligned_cols=55 Identities=11% Similarity=0.045 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCeEEEEccCCCCCC-----ChHHHHHHHcCCCCCcceEEecC
Q 015082 79 EAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTP-----SLSAMVINHYKLRGNIISYNLGG 137 (413)
Q Consensus 79 ~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p-----~~a~~v~~~lGl~~~~~~~~v~~ 137 (413)
.+.....++++|+++|++++|||.|.++..|+.... +.|..++..+++ +.+.+++
T Consensus 52 ~~~l~~~i~~~L~~~~~~~~did~iavt~GPG~~tglrvg~~~Ak~La~~~~i----pl~~v~h 111 (332)
T PRK09604 52 VENIVPLIEEALKEAGLTLEDIDAIAVTAGPGLVGALLVGVSFAKALALALNK----PLIGVNH 111 (332)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCcHHhHHHHHHHHHHHHHHhCC----CEEeecC
Confidence 344577889999999999999999999988753222 234555555544 4555554
No 201
>TIGR00329 gcp_kae1 metallohydrolase, glycoprotease/Kae1 family. This subfamily includes the well-studied secreted O-sialoglycoprotein endopeptidase (glycoprotease, EC 3.4.24.57) of Pasteurella haemolytica, a pathogen. A member from Riemerella anatipestifer, associated with cohemolysin activity, likewise is exported without benefit of a classical signal peptide and shows glycoprotease activity on the test substrate glycophorin. However, archaeal members of this subfamily show unrelated activities as demonstrated in Pyrococcus abyssi: DNA binding, iron binding, apurinic endonuclease activity, genomic association with a kinase domain, and no glycoprotease activity. This family thus pulls together a set of proteins as a homology group that appears to be near-universal in life, yet heterogeneous in assayed function between bacteria and archaea.
Probab=74.86 E-value=8.4 Score=37.46 Aligned_cols=54 Identities=4% Similarity=-0.013 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCeEEEEccCCCCCC-----ChHHHHHHHcCCCCCcceEEecC
Q 015082 80 AVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTP-----SLSAMVINHYKLRGNIISYNLGG 137 (413)
Q Consensus 80 ~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p-----~~a~~v~~~lGl~~~~~~~~v~~ 137 (413)
+.....++++|+++|++++|||.|.++..|+.... +.|..++..++ ++...++.
T Consensus 50 ~~l~~~i~~~l~~~~~~~~did~iav~~GPG~~tglrvg~~~Ak~la~~~~----~p~~~v~h 108 (305)
T TIGR00329 50 ENIPPLLERALIESNVDKSEIDLIAYTQGPGLGGSLRVGATFARSLALSLD----KPLIGVNH 108 (305)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEecCCCchhhHHHHHHHHHHHHHHhC----CCEeeccc
Confidence 34467789999999999999999999988764222 13444444444 45566664
No 202
>COG0533 QRI7 Metal-dependent proteases with possible chaperone activity [Posttranslational modification, protein turnover, chaperones]
Probab=74.84 E-value=12 Score=36.93 Aligned_cols=81 Identities=17% Similarity=0.096 Sum_probs=50.0
Q ss_pred HHHHHHHHHhCCCCCCCcCeEEEEccCCCCCCC--hHHHHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHHcC-C-
Q 015082 83 FGAIDELFAKTSVKPKDIGILIVNCSLFNPTPS--LSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVH-P- 158 (413)
Q Consensus 83 ~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~--~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~~g-~- 158 (413)
...++++|+++|++.+|||.|-++..|+. .++ .....++.|.+.-+.|.+.|++ |-|=+ -..++..+ .
T Consensus 55 ~~li~~al~eA~~~~~dID~IA~T~gPGL-~gaL~VG~~~Ak~LA~a~~kPli~VnH--~~gHi-----~a~~l~~~~~~ 126 (342)
T COG0533 55 PPLIEEALAEAGVSLEDIDAIAVTAGPGL-GGALLVGATAAKALALALNKPLIPVNH--LEGHI-----EAARLETGLAF 126 (342)
T ss_pred HHHHHHHHHHcCCCcccCCEEEEecCCCc-hhHHHHHHHHHHHHHHHhCCCEeecch--HHHHH-----HHHHhccCCCC
Confidence 67889999999999999999999888764 222 1223333333333467788884 54422 23344343 3
Q ss_pred CCeEEEEEEcccc
Q 015082 159 NSYALVISMENIT 171 (413)
Q Consensus 159 ~~~vLVv~~e~~s 171 (413)
.=.+|+|++-+..
T Consensus 127 p~v~LlVSGGHTq 139 (342)
T COG0533 127 PPVALLVSGGHTQ 139 (342)
T ss_pred CcEEEEEecCceE
Confidence 3456777766543
No 203
>PRK14878 UGMP family protein; Provisional
Probab=74.82 E-value=9.3 Score=37.51 Aligned_cols=57 Identities=12% Similarity=0.065 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCcCeEEEEccCCCCCC-----ChHHHHHHHcCCCCCcceEEecC
Q 015082 76 KEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTP-----SLSAMVINHYKLRGNIISYNLGG 137 (413)
Q Consensus 76 ~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p-----~~a~~v~~~lGl~~~~~~~~v~~ 137 (413)
.+...+ ..+++++|+++|++++|||.|.++..|+.... +.|..++..+++ +...+++
T Consensus 43 ~h~~~l-~~~i~~~l~~a~~~~~did~Iavt~gPG~~~~lrvg~~~Ak~la~~~~~----p~~~v~h 104 (323)
T PRK14878 43 HHAEVA-PELLRKALEKAGISIEDIDAVAVSQGPGLGPALRVGATAARALALKYNK----PLVPVNH 104 (323)
T ss_pred HHHHHH-HHHHHHHHHHcCCCHHHCCEEEEecCCCcccchHHHHHHHHHHHHHhCC----Cccccch
Confidence 344444 48899999999999999999999988754222 235566666655 3445553
No 204
>PRK09051 beta-ketothiolase; Provisional
Probab=74.46 E-value=9.8 Score=38.46 Aligned_cols=48 Identities=13% Similarity=0.158 Sum_probs=33.2
Q ss_pred HHHHHHHHHhCCCCCCCcCeEEEEccCCCCCCChHHHHHHHcCCCCCcceEEec
Q 015082 83 FGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLG 136 (413)
Q Consensus 83 ~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~v~ 136 (413)
..|++++|+++|++++|||.+=+.-. .........+.||+.+ ..+..+
T Consensus 295 ~~a~~~al~~agi~~~did~~ei~d~----f~~~~~~~~e~lg~~~--~~vN~~ 342 (394)
T PRK09051 295 VPATQKALERAGLTVADLDVIEANEA----FAAQACAVTRELGLDP--AKVNPN 342 (394)
T ss_pred HHHHHHHHHHcCCCHHHcCEEEecCc----cHHHHHHHHHHhCCCc--cccCCC
Confidence 68999999999999999998765311 2233445567889863 334444
No 205
>TIGR03723 bact_gcp putative glycoprotease GCP. This model represents bacterial members of a protein family that is widely distributed. In a few pathogenic species, the protein is exported in a way that may represent an exceptional secondary function. This model plus companion (archaeal) model TIGR03722 together span the prokaryotic member sequences of TIGR00329, a protein family that appears universal in life, and whose broad function is unknown. A member of TIGR03722 has been characterized as a DNA-binding protein with apurinic endopeptidase activity. In contrast, the rare characterized members of the present family show O-sialoglycoprotein endopeptidase (EC. 3.4.24.57) activity after export. These include glycoprotease (gcp) from Pasteurella haemolytica A1 and a cohemolysin from Riemerella anatipestifer (GB|AAG39646.1). The member from Staphylococcus aureus is essential and is related to cell wall dynamics and the modulation of autolysis, but members are also found in the Mycoplasmas
Probab=73.11 E-value=9.4 Score=37.32 Aligned_cols=54 Identities=13% Similarity=0.053 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCeEEEEccCCCCCC-----ChHHHHHHHcCCCCCcceEEecC
Q 015082 80 AVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTP-----SLSAMVINHYKLRGNIISYNLGG 137 (413)
Q Consensus 80 ~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p-----~~a~~v~~~lGl~~~~~~~~v~~ 137 (413)
+.....++++|++++++.+|||.|.++..|+.... +.|.-++..++ ++.+.+++
T Consensus 51 ~~l~~~i~~~l~~~~~~~~~id~iav~~GPGsftglrig~~~Ak~la~~~~----~p~~~v~h 109 (314)
T TIGR03723 51 EAIPPLIEEALAEAGLTLSDIDAIAVTAGPGLIGALLVGVSFAKALALALN----KPLIGVNH 109 (314)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEecCCChHHhHHHHHHHHHHHHHHhC----CCEEeccc
Confidence 34467889999999999999999999988864222 23444444444 45666664
No 206
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=72.32 E-value=8 Score=39.55 Aligned_cols=20 Identities=15% Similarity=0.155 Sum_probs=15.9
Q ss_pred hhhcccccCceEEEEecCCC
Q 015082 184 VSNCLFRMGGAAILLSNRFS 203 (413)
Q Consensus 184 ~~~~lfGDGAaA~ll~~~~~ 203 (413)
.+.+..+|||+|+||.+.+.
T Consensus 261 ~~~s~~~DGAaA~vl~s~e~ 280 (426)
T PRK08170 261 GNSSQITDGACWLLLASEEA 280 (426)
T ss_pred cccCCCCCceEEEEEecHHH
Confidence 34577899999999997654
No 207
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=71.97 E-value=12 Score=38.04 Aligned_cols=45 Identities=9% Similarity=-0.004 Sum_probs=30.1
Q ss_pred HHHHHHHHHHhCCCCCCCcCeEEEE-ccCCCCCCChHHHHHHHcCCC
Q 015082 82 MFGAIDELFAKTSVKPKDIGILIVN-CSLFNPTPSLSAMVINHYKLR 127 (413)
Q Consensus 82 a~~Aa~~aL~~ag~~~~~Id~li~~-s~~~~~~p~~a~~v~~~lGl~ 127 (413)
..++.++||+++|+ ++|||.|... +.+......-..-+.+.++.+
T Consensus 282 ~~~am~~AL~~Agl-~~~IdyI~ahgtgT~~~D~~E~~Ai~~~f~~p 327 (398)
T PRK06519 282 LEASLERLLKPAGG-LAAPTAVISGATGAHPATAEEKAALEAALAGP 327 (398)
T ss_pred HHHHHHHHHHHCCC-cccCCEEEeCCCCCCCccHHHHHHHHHHcCCC
Confidence 36899999999999 8999998755 433211222344556666653
No 208
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=71.32 E-value=11 Score=38.04 Aligned_cols=42 Identities=26% Similarity=0.295 Sum_probs=29.3
Q ss_pred HHHHHHHHHHhCCCCCCCcCeEEEEccCCCCCCChHHHHHHHcCCC
Q 015082 82 MFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLR 127 (413)
Q Consensus 82 a~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lGl~ 127 (413)
...|++++|+++|++++|||.+-+.-. .+.......+.||+.
T Consensus 291 ~~~a~~~al~~agl~~~did~~ei~d~----f~~~~l~~~e~lg~~ 332 (391)
T PRK07661 291 PIAAIPKALKLAGLELSDIGLFELNEA----FASQSIQVIRELGLD 332 (391)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEeCCH----HHHHHHHHHHHcCCC
Confidence 368999999999999999998874421 122223334578875
No 209
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=71.11 E-value=12 Score=37.57 Aligned_cols=40 Identities=18% Similarity=0.341 Sum_probs=29.1
Q ss_pred HHHHHHHHHhCCCCCCCcCeEEEE-ccCCCCCCChHHHHHHHcCCC
Q 015082 83 FGAIDELFAKTSVKPKDIGILIVN-CSLFNPTPSLSAMVINHYKLR 127 (413)
Q Consensus 83 ~~Aa~~aL~~ag~~~~~Id~li~~-s~~~~~~p~~a~~v~~~lGl~ 127 (413)
..|++++|+++|++++|||.+-.. +.+ .......+.||+.
T Consensus 261 ~~a~~~al~~aGi~~~did~~e~~d~ft-----~~~~~~~e~lgl~ 301 (389)
T PRK06064 261 VVAAEKAYKMAGIEPKDIDVAEVHDCFT-----IAEILAYEDLGFA 301 (389)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEecCCCc-----HHHHHHHHHcCCC
Confidence 579999999999999999987654 332 1334456677774
No 210
>PRK05790 putative acyltransferase; Provisional
Probab=70.25 E-value=12 Score=37.68 Aligned_cols=41 Identities=17% Similarity=0.184 Sum_probs=28.8
Q ss_pred HHHHHHHHHhCCCCCCCcCeEEEEccCCCCCCChHHHHHHHcCCC
Q 015082 83 FGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLR 127 (413)
Q Consensus 83 ~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lGl~ 127 (413)
..|++++|+++|++++|||.+-+.-. .........+.||+.
T Consensus 294 ~~a~~~a~~~Agi~~~did~~e~~d~----f~~~~l~~~e~lg~~ 334 (393)
T PRK05790 294 VPAIRKALEKAGWSLADLDLIEINEA----FAAQALAVEKELGLD 334 (393)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEeCcH----HHHHHHHHHHHhCCC
Confidence 57999999999999999998864311 122233455678875
No 211
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=70.04 E-value=11 Score=37.87 Aligned_cols=52 Identities=8% Similarity=0.036 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCcCeEEEEcc-CCCCCCChHHHHHHHcCCC
Q 015082 75 RKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLR 127 (413)
Q Consensus 75 ~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~-~~~~~p~~a~~v~~~lGl~ 127 (413)
.+...+...++.++.|+++|++++|||.+++.+. +....... ..+.++++++
T Consensus 200 ~~~y~~~~~~~~~~~l~~~g~~~~did~~i~H~p~~~~~~k~~-~~~l~~~~~~ 252 (379)
T TIGR01835 200 NEQYLNAFENAWNDYAKRTGLSLADFAAFCFHVPFTKMGLKAL-RHILKKNYED 252 (379)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHcCEEEECCCCCcHHHHHH-HHHHhhcccc
Confidence 3345566788999999999999999999998763 21111122 2344566654
No 212
>PF07736 CM_1: Chorismate mutase type I; InterPro: IPR008243 Chorismate mutase (CM; 5.4.99.5 from EC) catalyses the reaction at the branch point of the biosynthetic pathway leading to the three aromatic amino acids, phenylalanine, tryptophan and tyrosine (chorismic acid is the last common intermediate, and CM leads to the L-phenylalanine/L-tyrosine branch). It is part of the shikimate pathway, which is present only in bacteria, fungi and plants. This entry represents a family of monofunctional (non-fused) chorismate mutases from Gram-positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus). They are monofunctional, homotrimeric, nonallosteric enzymes and are not regulated by the end-product aromatic amino acids. The three types of CM are AroQ class, Prokaryotic type (e.g., IPR008239 from INTERPRO amongst others); AroQ class, Eukaryotic type (IPR008238 from INTERPRO); and AroH class. They fall into two structural folds (AroQ class and AroH class) which are completely unrelated []. The two types of the AroQ structural class (the Escherichia coli CM dimer and the yeast CM monomer) can be structurally superimposed, and the topology of the four-helix bundle forming the active site is conserved []. For additional information please see [, , , , , , ].; PDB: 2CHS_K 2CHT_L 1COM_J 1FNJ_A 1FNK_A 1DBF_C 1UI9_A 1ODE_A 1UFY_A 1XHO_C ....
Probab=69.80 E-value=14 Score=30.64 Aligned_cols=51 Identities=12% Similarity=0.187 Sum_probs=33.3
Q ss_pred HHHHHHHHHhCCCCCCCcCeEEEEccCC--CCCCChHHHHHHHc-CCCCCcceEEecC
Q 015082 83 FGAIDELFAKTSVKPKDIGILIVNCSLF--NPTPSLSAMVINHY-KLRGNIISYNLGG 137 (413)
Q Consensus 83 ~~Aa~~aL~~ag~~~~~Id~li~~s~~~--~~~p~~a~~v~~~l-Gl~~~~~~~~v~~ 137 (413)
.+-.++.+++.+++++||-.++|+.|+| ...|+.+ +.++ |+. +++.+....
T Consensus 23 ~eLl~~i~~~N~l~~~dIvSi~FT~T~DL~a~fPA~a---~R~~~g~~-~Vpl~c~~E 76 (118)
T PF07736_consen 23 RELLEEILERNELSPEDIVSIIFTVTPDLDAAFPAAA---ARELPGWD-DVPLMCAQE 76 (118)
T ss_dssp HHHHHHHHHHTT--GGGEEEEEEEE-TT--SS-TCHH---HHHTTTGT-TSEEEEEE-
T ss_pred HHHHHHHHHHcCCCHHHEEEEEEEeCCCcCccChHHH---HHccCCCC-ccceeccCc
Confidence 3445666789999999999999998875 4456543 3344 887 788887773
No 213
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=68.67 E-value=24 Score=35.69 Aligned_cols=42 Identities=21% Similarity=0.358 Sum_probs=30.7
Q ss_pred HHHHHHHHHHhCCCCCCCcCeEEEE-ccCCCCCCChHHHHHHHcCCCC
Q 015082 82 MFGAIDELFAKTSVKPKDIGILIVN-CSLFNPTPSLSAMVINHYKLRG 128 (413)
Q Consensus 82 a~~Aa~~aL~~ag~~~~~Id~li~~-s~~~~~~p~~a~~v~~~lGl~~ 128 (413)
...|+++|++++|++++|||.+-+. +. ........+.||+.+
T Consensus 278 ~~~aa~~a~~~Agi~~~Didv~el~D~f-----a~~~l~~le~lGl~~ 320 (403)
T PRK06289 278 VRQAVLDAYRRAGVGLDDLDGFEVHDCF-----TPSEYLAIDHIGLTG 320 (403)
T ss_pred HHHHHHHHHHHcCCCHHHCeEEeeeccc-----hHHHHHHHHHcCCCC
Confidence 3579999999999999999987654 32 223445567788763
No 214
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=67.64 E-value=15 Score=36.93 Aligned_cols=73 Identities=16% Similarity=0.130 Sum_probs=41.9
Q ss_pred HHHHHHHHHhCCCCCCCcCeEEEE-ccCCCCCCChHHHHHHHcCCCCCcceEE----ecCccchhHHHHHHHHHHHHHcC
Q 015082 83 FGAIDELFAKTSVKPKDIGILIVN-CSLFNPTPSLSAMVINHYKLRGNIISYN----LGGMGCSAGLISIDLANNLLQVH 157 (413)
Q Consensus 83 ~~Aa~~aL~~ag~~~~~Id~li~~-s~~~~~~p~~a~~v~~~lGl~~~~~~~~----v~~~~C~~~~~al~~A~~~i~~g 157 (413)
.++++++|+++|++++|||.+... +.+....+.-..-+.+.+|-+ .+... +.+..+++++..+..+...++.|
T Consensus 263 ~~a~~~Al~~Agl~~~dId~v~~hgtgt~~~D~~E~~al~~~f~~~--~pv~s~K~~~Gh~~~AaG~~~l~~~~~~l~~~ 340 (392)
T PRK09185 263 ILAMQQALADAGLAPADIGYINLHGTATPLNDAMESRAVAAVFGDG--VPCSSTKGLTGHTLGAAGAVEAAICWLALRHG 340 (392)
T ss_pred HHHHHHHHHHcCCCHHHccEEEeCCCCCcCCCHHHHHHHHHHhCCC--CceeCCCcccccChhhcchHHHHHHHHHHhcC
Confidence 589999999999999999998754 432211222234445555532 22111 22234455555555555556655
No 215
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=67.25 E-value=7.5 Score=36.13 Aligned_cols=82 Identities=10% Similarity=-0.023 Sum_probs=44.8
Q ss_pred HhhhhccCCCccchhccccEEEe----cCCChHHHHHHHHhcCCCcccchhhHHHHhhhcCCCcchHHHHHHHHHHcCCC
Q 015082 284 KLFKMKIKPYIPDFKLAFEHFCI----HAGGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRI 359 (413)
Q Consensus 284 ~v~~~al~~~~~~~~~did~~i~----hq~~~~~~~~i~~~lgi~~e~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~l 359 (413)
+..+.++++ .+..++||+++|+ -...+.+.-.+.++||++++--+ .- .+-+|++.=...|..+.+=-+-
T Consensus 106 ~Aa~~AL~~-~g~~~~dIthlv~vs~TG~~~PglD~~l~~~LgL~~~v~R---~~---i~~~GC~gg~~~L~~A~~~~~~ 178 (226)
T PF00195_consen 106 EAARKALAE-AGLDPSDITHLVTVSCTGIAAPGLDARLINRLGLRPDVQR---TP---IFGMGCAGGAAGLRRAKDIARA 178 (226)
T ss_dssp HHHHHHHHH-HTS-GGGECEEEEEESSSSECS-HHHHHHHHHT--TTSEE---EE---EES-GGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-cCCCCcccceEEEEecCCcCCCchhHHHHhcCCCCCCcEE---EE---EeccchhhHHHHHHHHHHHHhC
Confidence 333344443 2344789999995 23466777789999999875431 22 4455555555555433321122
Q ss_pred CCCCeEEEEeecc
Q 015082 360 KKGDRTWQIAFGS 372 (413)
Q Consensus 360 ~~Gd~vll~~~G~ 372 (413)
.||.+||+++.=.
T Consensus 179 ~p~a~VLvv~vEl 191 (226)
T PF00195_consen 179 NPGARVLVVCVEL 191 (226)
T ss_dssp STT-EEEEEEEEE
T ss_pred CccceEEEEEEEe
Confidence 5899999988753
No 216
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=67.17 E-value=9.4 Score=38.81 Aligned_cols=73 Identities=15% Similarity=0.163 Sum_probs=43.0
Q ss_pred HHHHHHHHHhCCCCCCCcCeEEEE-ccCCCCCCChHHHHHHHcCCCCC----cceEEecCccchhHHHHHHHHHHHHHc
Q 015082 83 FGAIDELFAKTSVKPKDIGILIVN-CSLFNPTPSLSAMVINHYKLRGN----IISYNLGGMGCSAGLISIDLANNLLQV 156 (413)
Q Consensus 83 ~~Aa~~aL~~ag~~~~~Id~li~~-s~~~~~~p~~a~~v~~~lGl~~~----~~~~~v~~~~C~~~~~al~~A~~~i~~ 156 (413)
.+|.+.||+++|++++|||.|-.. |++..-...-...|..-+|-... ...-...| -|.|..-+++.+..++..
T Consensus 279 ~~am~~AL~~Agl~~~~idYinaHgTsT~~nD~~E~~ai~~vfg~~~~~~~vsstKs~tG-H~lGAaGaveai~~~l~l 356 (412)
T COG0304 279 IRAMRAALADAGLTPEDIDYINAHGTSTPANDKAESLAIKRVFGEHAKSLPVSSTKSLTG-HTLGAAGAVEAIISLLAL 356 (412)
T ss_pred HHHHHHHHHHcCCCHhHCCEEeCCCccCCCccHHHHHHHHHHhcccccCceeeecccccc-cChhhHHHHHHHHHHHHH
Confidence 699999999999999999999854 54432233334455555562211 11222332 455555555555655543
No 217
>TIGR01796 CM_mono_aroH monofunctional chorismate mutase, gram positive type, clade 1. This model represents a family of monofunctional (non-fused) chorismate mutases from gram positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus).
Probab=66.19 E-value=17 Score=29.92 Aligned_cols=50 Identities=12% Similarity=0.159 Sum_probs=36.7
Q ss_pred HHHHHHHHhCCCCCCCcCeEEEEccCC--CCCCChHHHHHHHc-CCCCCcceEEecC
Q 015082 84 GAIDELFAKTSVKPKDIGILIVNCSLF--NPTPSLSAMVINHY-KLRGNIISYNLGG 137 (413)
Q Consensus 84 ~Aa~~aL~~ag~~~~~Id~li~~s~~~--~~~p~~a~~v~~~l-Gl~~~~~~~~v~~ 137 (413)
+-.++.+++.+++++||-.++|+.|+| ..+|+ ..+.++ |+. +++.++...
T Consensus 24 eLl~~ii~~N~l~~edivSv~FT~T~DL~a~FPA---~aaR~~~Gw~-~Vplmc~qE 76 (117)
T TIGR01796 24 ELLTELMERNELTPEDLISVIFTVTEDLHADFPA---AAARGLPGWT-DVPVMCAQE 76 (117)
T ss_pred HHHHHHHHHcCCCHHHEEEEEEEecCcccccChH---HHHHhccCCC-CcceeccCc
Confidence 334566789999999999999998765 33553 445566 998 788887774
No 218
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=65.76 E-value=34 Score=34.98 Aligned_cols=26 Identities=15% Similarity=0.234 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHhCCCCCCCcCeEEEE
Q 015082 81 VMFGAIDELFAKTSVKPKDIGILIVN 106 (413)
Q Consensus 81 la~~Aa~~aL~~ag~~~~~Id~li~~ 106 (413)
....|++++++++|++++|||.+=+.
T Consensus 310 ~~~~a~~~a~~~AGl~~~Did~~Ei~ 335 (427)
T PRK09268 310 APAYAVPRLLARNGLTLQDFDFYEIH 335 (427)
T ss_pred cHHHHHHHHHHHcCCCHHHCCEEEec
Confidence 34579999999999999999988654
No 219
>TIGR03722 arch_KAE1 universal archaeal protein Kae1. This family represents the archaeal protein Kae1. Its partner Bud32 is fused with it in about half of the known archaeal genomes. The pair, which appears universal in the archaea, corresponds to EKC/KEOPS complex in eukaryotes. A recent characterization of the member from Pyrococcus abyssi, as an iron-binding, atypical DNA-binding protein with an apurinic lyase activity, challenges the common annotation of close homologs as O-sialoglycoprotein endopeptidase. The latter annotation is based on a characterized protein from the bacterium Pasteurella haemolytica.
Probab=65.47 E-value=14 Score=36.13 Aligned_cols=58 Identities=12% Similarity=0.015 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCcCeEEEEccCCCCCC-----ChHHHHHHHcCCCCCcceEEecC
Q 015082 75 RKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTP-----SLSAMVINHYKLRGNIISYNLGG 137 (413)
Q Consensus 75 ~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p-----~~a~~v~~~lGl~~~~~~~~v~~ 137 (413)
+++...|. .+++++|+++|++++|||.|.++..|..... ..+..++..+++ +...|++
T Consensus 43 ~~H~~~l~-~~i~~~l~~~~~~~~did~Iavt~gPg~~~~l~vg~~~ak~la~~~~~----p~~~v~h 105 (322)
T TIGR03722 43 EHHAEVAP-KLIKEALEEAGVSLEDIDAVAFSQGPGLGPCLRVGATAARALALKLNK----PLVGVNH 105 (322)
T ss_pred HHHHHHHH-HHHHHHHHHcCCCHHHCCEEEEecCCchHHhHHHHHHHHHHHHHHhCC----Ceechhh
Confidence 34444554 4599999999999999999999987653211 124555555554 4555553
No 220
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=64.88 E-value=11 Score=38.21 Aligned_cols=75 Identities=11% Similarity=0.099 Sum_probs=41.1
Q ss_pred HHHHHHHHHhCCCCCCCcCeEEEE-ccCCCCCCChHHHHHHHcCCC-CCcceEE----ecCccchhHHHHHHHHHHHHHc
Q 015082 83 FGAIDELFAKTSVKPKDIGILIVN-CSLFNPTPSLSAMVINHYKLR-GNIISYN----LGGMGCSAGLISIDLANNLLQV 156 (413)
Q Consensus 83 ~~Aa~~aL~~ag~~~~~Id~li~~-s~~~~~~p~~a~~v~~~lGl~-~~~~~~~----v~~~~C~~~~~al~~A~~~i~~ 156 (413)
.+|+++||+++|++++|||.+-.. +.+....+.-..-+...+|.. .+++... +.+..+++++..+..+...++.
T Consensus 279 ~~a~~~Al~~agi~~~dId~v~~hgtgt~~~d~~E~~al~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~~i~~~l~l~~ 358 (411)
T PRK07314 279 ARAMKLALKDAGINPEDIDYINAHGTSTPAGDKAETQAIKRVFGEHAYKVAVSSTKSMTGHLLGAAGAVEAIFSVLAIRD 358 (411)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEccccCCccccHHHHHHHHHHhcccCCCCeeECccchhchhHHHHHHHHHHHHHHHHhC
Confidence 579999999999999999998754 433222222233455555532 1122211 1212334444455555555555
Q ss_pred C
Q 015082 157 H 157 (413)
Q Consensus 157 g 157 (413)
+
T Consensus 359 ~ 359 (411)
T PRK07314 359 Q 359 (411)
T ss_pred C
Confidence 5
No 221
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=64.85 E-value=11 Score=37.91 Aligned_cols=76 Identities=14% Similarity=0.083 Sum_probs=45.5
Q ss_pred HHHHHHHHHHhCCCCCCCcCeEEEE-ccCCCCCCChHHHHHHHcCCC-CCcceEE----ecCccchhHHHHHHHHHHHHH
Q 015082 82 MFGAIDELFAKTSVKPKDIGILIVN-CSLFNPTPSLSAMVINHYKLR-GNIISYN----LGGMGCSAGLISIDLANNLLQ 155 (413)
Q Consensus 82 a~~Aa~~aL~~ag~~~~~Id~li~~-s~~~~~~p~~a~~v~~~lGl~-~~~~~~~----v~~~~C~~~~~al~~A~~~i~ 155 (413)
..++++++|+++|++++|||.|... +.+....+.-+.-+...++-. ..++... +.+..+++++..+..+...++
T Consensus 277 ~~~~i~~al~~agi~~~dId~v~~h~tgt~~~d~~E~~al~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~ 356 (406)
T cd00834 277 AARAMRAALADAGLSPEDIDYINAHGTSTPLNDAAESKAIKRVFGEHAKKVPVSSTKSMTGHLLGAAGAVEAIATLLALR 356 (406)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEecccccCccccHHHHHHHHHHhcccCCCCceeCcchhhccchhhhhHHHHHHHHHHHh
Confidence 3678999999999999999998865 433222222333444444431 0122111 122356667777777777777
Q ss_pred cC
Q 015082 156 VH 157 (413)
Q Consensus 156 ~g 157 (413)
.|
T Consensus 357 ~~ 358 (406)
T cd00834 357 DG 358 (406)
T ss_pred cC
Confidence 66
No 222
>TIGR03725 bact_YeaZ universal bacterial protein YeaZ. This family describes a protein family, YeaZ, that appears to be universal in bacteria, but whose function is unknown. This family is related to the gcp (glycoprotease) protein family, also universal in bacteria and unknown in function. In Gram-positive lineages, members of these two related families often belong to the same operon, along with the ribosomal-protein-alanine acetyltransferase gene. Members of this family may occur as fusions with gcp or the ribosomal protein N-acetyltransferase rimI, and is frequently encoded next to rimI.
Probab=64.58 E-value=11 Score=34.18 Aligned_cols=58 Identities=16% Similarity=0.179 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCeEEEEccCCCCCC-ChHHHHHHHcCCCCCcceEEec
Q 015082 79 EAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTP-SLSAMVINHYKLRGNIISYNLG 136 (413)
Q Consensus 79 ~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p-~~a~~v~~~lGl~~~~~~~~v~ 136 (413)
.+.....++++|+++|++++|||.|.++..|+.... -.+..+++-|....+++.+.++
T Consensus 34 ~~~l~~~i~~~l~~~~~~~~~i~~iav~~GPGSfTGlRig~~~akgla~~~~~p~~~vs 92 (202)
T TIGR03725 34 SEILLPMIEELLAEAGLSLQDLDAIAVGVGPGSFTGLRIGLATAKGLALALGIPLVGVS 92 (202)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecCCChHHhHHHHHHHHHHHHHHhCCCEEecC
Confidence 344467889999999999999999999988764333 1222233322222235666666
No 223
>COG4126 Hydantoin racemase [Amino acid transport and metabolism]
Probab=63.85 E-value=49 Score=30.53 Aligned_cols=94 Identities=17% Similarity=0.289 Sum_probs=60.7
Q ss_pred HHHHHHHHHcCCCceeecC--CcccCCCCCccHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcCeEEEEccCCCCCCChHH
Q 015082 41 QFQKKILERSGLGDSTYLP--EAVLNIPPNPSMKEARKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSA 118 (413)
Q Consensus 41 ~~~~~i~~~~GI~~R~~~~--~~~~~~~~~~~ma~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~ 118 (413)
..+..+.+..|+..+++.. .+. +..++..-.+.+..+....+++++++- .-|.|+++|.. +..++.
T Consensus 123 ~il~~lv~~~g~s~~~~~vrstdl----~vL~l~~~~~~~~~~l~~~~~~a~~ed-----gAeaIiLGCAG---ms~la~ 190 (230)
T COG4126 123 PILEELVRSYGLSRHCRSVRSTDL----PVLALEGPPEEAEALLVIEAAEALKED-----GAEAIILGCAG---MSDLAD 190 (230)
T ss_pred HHHHHHHHhcCccccccceeeCCC----CcccccCChHHHHHHHHHHHHHHhhhc-----CCCEEEEcCcc---HHHHHH
Confidence 3455667788888876531 110 112222223556677777777776653 57889999874 456799
Q ss_pred HHHHHcCCCCCcceEEecCccchhHHHHHHHHHHHHHcC
Q 015082 119 MVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVH 157 (413)
Q Consensus 119 ~v~~~lGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~~g 157 (413)
+++..+|++ . +++ ...+..+|..++..|
T Consensus 191 ~Lq~~~gvP----V--IDg-----v~Aav~~a~~L~~~~ 218 (230)
T COG4126 191 QLQKAFGVP----V--IDG-----VAAAVKLAEGLLGMG 218 (230)
T ss_pred HHHHHhCCC----c--ccc-----hHHHHHHHHHHHhhc
Confidence 999999976 1 343 456777888887766
No 224
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=63.85 E-value=11 Score=37.96 Aligned_cols=45 Identities=9% Similarity=0.099 Sum_probs=30.1
Q ss_pred HHHHHHHHHHhCCCCCCCcCeEEEE-ccCCCCCCChHHHHHHHcCC
Q 015082 82 MFGAIDELFAKTSVKPKDIGILIVN-CSLFNPTPSLSAMVINHYKL 126 (413)
Q Consensus 82 a~~Aa~~aL~~ag~~~~~Id~li~~-s~~~~~~p~~a~~v~~~lGl 126 (413)
..+++++||+++|++++|||.+... +.+....+.-...+...+|-
T Consensus 277 ~~~ai~~Al~~Agi~~~dId~ve~h~tgt~~~D~~E~~a~~~~~~~ 322 (407)
T TIGR03150 277 AARAMRAALKDAGINPEDVDYINAHGTSTPLGDKAETKAIKRVFGD 322 (407)
T ss_pred HHHHHHHHHHHcCCCHhHCCEEeCcCCCCCCCCHHHHHHHHHHhcc
Confidence 3689999999999999999998754 43322123333445555553
No 225
>KOG2707 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]
Probab=63.72 E-value=12 Score=36.96 Aligned_cols=52 Identities=13% Similarity=0.102 Sum_probs=38.2
Q ss_pred HHHHHHHHHHhCCCCCCCcCeEEEEccCCCCCC-----ChHHHHHHHcCCCCCcceEEecC
Q 015082 82 MFGAIDELFAKTSVKPKDIGILIVNCSLFNPTP-----SLSAMVINHYKLRGNIISYNLGG 137 (413)
Q Consensus 82 a~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p-----~~a~~v~~~lGl~~~~~~~~v~~ 137 (413)
-.++.++||+++|+.++|+|+|-+...|+...+ +.|..++.++.. |-+.|.+
T Consensus 86 i~~~iqral~aa~~~p~dldaIAVT~gPGl~lsL~vGl~fA~glA~~l~k----PlipVHH 142 (405)
T KOG2707|consen 86 IPRLIQRALDAAGLSPKDLDAIAVTRGPGLPLSLKVGLSFAKGLAVKLQK----PLIPVHH 142 (405)
T ss_pred HHHHHHHHHHHcCCCcccceeEEEecCCCceeehhhhHHHHHHHHHhccC----CccchhH
Confidence 357889999999999999999988877765433 356677776654 4455664
No 226
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=63.53 E-value=12 Score=37.65 Aligned_cols=26 Identities=19% Similarity=0.289 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHhCCCCCCCcCeEEEE
Q 015082 81 VMFGAIDELFAKTSVKPKDIGILIVN 106 (413)
Q Consensus 81 la~~Aa~~aL~~ag~~~~~Id~li~~ 106 (413)
-..++++++|+++|++++|||.|...
T Consensus 275 ~~~~a~~~Al~~Agi~~~dId~i~~h 300 (407)
T cd00828 275 GIARAIRTALAKAGLSLDDLDVISAH 300 (407)
T ss_pred HHHHHHHHHHHHcCCCHHHcCEEecc
Confidence 34789999999999999999998754
No 227
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=62.06 E-value=23 Score=37.23 Aligned_cols=58 Identities=16% Similarity=0.157 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCcCeEEEEccCCCCCC-----ChHHHHHHHcCCCCCcceEEecC
Q 015082 75 RKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTP-----SLSAMVINHYKLRGNIISYNLGG 137 (413)
Q Consensus 75 ~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p-----~~a~~v~~~lGl~~~~~~~~v~~ 137 (413)
+.+...|. .+++++|+++|++++|||.|.++..|+.... +.|..++..+|+ +...|++
T Consensus 46 ~~H~~~l~-~~i~~~l~~~~~~~~~id~iav~~gPg~~~~l~vg~~~ak~la~~~~~----~~~~v~h 108 (535)
T PRK09605 46 EHHAEAIP-KVIKEALEEAGLKPEDIDLVAFSQGPGLGPCLRVVATAARALALSLDV----PLIGVNH 108 (535)
T ss_pred HHHHHHHH-HHHHHHHHHcCCCHhhCCEEEECCCCCcHhhHHHHHHHHHHHHHHhCC----CeecccH
Confidence 34455554 8899999999999999999998887753211 124445555554 4555664
No 228
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=62.01 E-value=18 Score=38.31 Aligned_cols=75 Identities=11% Similarity=0.125 Sum_probs=40.9
Q ss_pred HHHHHHHHHhCCCCCCCcCeEEEE-ccCCCCCCChHHHHHHHcCCCCCcceEE----ecCccchhHHHHHHHHHHHHHcC
Q 015082 83 FGAIDELFAKTSVKPKDIGILIVN-CSLFNPTPSLSAMVINHYKLRGNIISYN----LGGMGCSAGLISIDLANNLLQVH 157 (413)
Q Consensus 83 ~~Aa~~aL~~ag~~~~~Id~li~~-s~~~~~~p~~a~~v~~~lGl~~~~~~~~----v~~~~C~~~~~al~~A~~~i~~g 157 (413)
.++.++||+++|++++|||.|-.. +.+....+.-...|.+.+|-.+..+... +.+..+++++..+..+...|+.|
T Consensus 408 ~~am~~AL~~AGl~p~dIdyInaHGTGT~~gD~~E~~Ai~~~Fg~~~~~pV~S~Ks~iGH~~gAAGa~eli~~~lal~~g 487 (540)
T PLN02787 408 ILCIEKALAQSGVSKEDVNYINAHATSTKAGDLKEYQALMRCFGQNPELRVNSTKSMIGHLLGAAGAVEAIATVQAIRTG 487 (540)
T ss_pred HHHHHHHHHHcCCCHHHCcEEEccCccCCCCCHHHHHHHHHHhCCCCCceeeCCCCCcCCCcccchHHHHHHHHHHHhcC
Confidence 688999999999999999988754 4322111222344555555322222221 12223333444444455556555
No 229
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=61.80 E-value=15 Score=37.17 Aligned_cols=75 Identities=13% Similarity=0.170 Sum_probs=42.4
Q ss_pred HHHHHHHHHHhCCCCCCCcCeEEEE-ccCCCCCCChHHHHHHHcCCCCCcceEEe----cCccchhHHHHHHHHHHHHHc
Q 015082 82 MFGAIDELFAKTSVKPKDIGILIVN-CSLFNPTPSLSAMVINHYKLRGNIISYNL----GGMGCSAGLISIDLANNLLQV 156 (413)
Q Consensus 82 a~~Aa~~aL~~ag~~~~~Id~li~~-s~~~~~~p~~a~~v~~~lGl~~~~~~~~v----~~~~C~~~~~al~~A~~~i~~ 156 (413)
..+|.+++|+++|+++++||.|... +.+....+.-..-+.+-+|-. ..+...+ .+..+++++..+..+...++.
T Consensus 272 ~~~a~~~al~~ag~~~~~i~~v~~hgtgt~~~D~~E~~al~~~fg~~-~~pv~s~K~~~Gh~~~aaG~~~l~~~~l~l~~ 350 (399)
T cd00832 272 LARAIRLALADAGLTPEDVDVVFADAAGVPELDRAEAAALAAVFGPR-GVPVTAPKTMTGRLYAGGAPLDVATALLALRD 350 (399)
T ss_pred HHHHHHHHHHHcCCCHHHccEEEeccCcCCCCCHHHHHHHHHHhCCC-CCceeCCCchhcchHHHHHHHHHHHHHHHHhC
Confidence 4688999999999999999988755 433222233344555556643 2232222 212234444444444455555
Q ss_pred C
Q 015082 157 H 157 (413)
Q Consensus 157 g 157 (413)
+
T Consensus 351 ~ 351 (399)
T cd00832 351 G 351 (399)
T ss_pred C
Confidence 4
No 230
>PRK06158 thiolase; Provisional
Probab=61.48 E-value=24 Score=35.50 Aligned_cols=41 Identities=12% Similarity=0.166 Sum_probs=28.9
Q ss_pred HHHHHHHHHHhCCCCCCCcCeEEEE-ccCCCCCCChHHHHHHHcCCC
Q 015082 82 MFGAIDELFAKTSVKPKDIGILIVN-CSLFNPTPSLSAMVINHYKLR 127 (413)
Q Consensus 82 a~~Aa~~aL~~ag~~~~~Id~li~~-s~~~~~~p~~a~~v~~~lGl~ 127 (413)
...|++++++++|++++|||.+=+. +. +.......+.||+.
T Consensus 256 ~~~aa~~A~~~AGi~p~DId~~ElyD~F-----s~~~l~~~E~lG~~ 297 (384)
T PRK06158 256 AAESGPRAFAMAGLTPADIDVVELYDAF-----TINTILFLEDLGFC 297 (384)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEecCCc-----hHHHHHHHHHcCCC
Confidence 3679999999999999999987554 33 22223344667765
No 231
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=61.36 E-value=91 Score=31.48 Aligned_cols=55 Identities=11% Similarity=-0.145 Sum_probs=37.4
Q ss_pred ccccEEEecCCChHHHHHHHHhcCCCcccchhhHHHH-------------------hhhcCCCcchHHHHHHHHHH
Q 015082 299 LAFEHFCIHAGGRAVLDELEKNLQLSDWHMEPSRMTL-------------------YRFGNTSSSSLWYELAYSEA 355 (413)
Q Consensus 299 ~did~~i~hq~~~~~~~~i~~~lgi~~e~~~~s~~~l-------------------~~~Gn~~sasi~i~L~~~~~ 355 (413)
+|||.+=+|-.-..+.-...|.||+-+.=- ....+ -.+||.+.|+=+..+.++.+
T Consensus 282 ~diD~~ei~D~Fs~~~l~~~E~lG~~~~G~--~~~~~~~g~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~ 355 (392)
T PRK06065 282 KEIDVAEPYDPFDYKELHHLEGLQLAKRGE--APKLLKEGVFDIDGDIPSSPSGGLLGVGNPIAAAGLMKVISIYW 355 (392)
T ss_pred hhCcEEEecCCChHHHHHHHHHcCCCCCCc--HHHHHHCCCccCCCCeeecCCCccccCCCCccHHHHHHHHHHHH
Confidence 799999999987777667778888654310 01111 22799988877777776655
No 232
>PRK07855 lipid-transfer protein; Provisional
Probab=60.68 E-value=37 Score=34.23 Aligned_cols=24 Identities=25% Similarity=0.332 Sum_probs=21.1
Q ss_pred HHHHHHHHHhCCCCCCCcCeEEEE
Q 015082 83 FGAIDELFAKTSVKPKDIGILIVN 106 (413)
Q Consensus 83 ~~Aa~~aL~~ag~~~~~Id~li~~ 106 (413)
..|+++|++++|++++|||.+-+.
T Consensus 269 ~~aa~~a~~~AGi~~~DiDv~El~ 292 (386)
T PRK07855 269 GLVARQLWAQSGLGPADIDTAILY 292 (386)
T ss_pred HHHHHHHHHHcCCCHHHCcEEEec
Confidence 479999999999999999987544
No 233
>KOG2708 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]
Probab=60.37 E-value=23 Score=32.89 Aligned_cols=82 Identities=17% Similarity=0.219 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHhCCCCCCCcCeEEEEccCCCCCCCh-HHHHHHHcC-CCCCcceEEecCccchhHHHHHHHHHHHHHcCC
Q 015082 81 VMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSL-SAMVINHYK-LRGNIISYNLGGMGCSAGLISIDLANNLLQVHP 158 (413)
Q Consensus 81 la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~-a~~v~~~lG-l~~~~~~~~v~~~~C~~~~~al~~A~~~i~~g~ 158 (413)
....-++.+|++++++.+|||.+.+.-.|+...|-. ...++.-|. +. +.|-..++ -|.+-+ .+... |..-.
T Consensus 52 ~il~Lv~~al~ea~v~~~diD~icyTKGPGmgaPL~~vaivaRtlsllw-~kPlv~VN--HCigHI---EMGR~-iTgA~ 124 (336)
T KOG2708|consen 52 WILGLVKQALEEAGVTSDDIDCICYTKGPGMGAPLSVVAIVARTLSLLW-NKPLVGVN--HCIGHI---EMGRE-ITGAQ 124 (336)
T ss_pred HHHHHHHHHHHHcCCChhhCCEEEEcCCCCCCCchhhHHHHHHHHHHHh-CCCcccch--hhhhhh---hhcce-eccCC
Confidence 334557888999999999999888877776656632 233343333 23 56777777 677633 33332 22223
Q ss_pred CCeEEEEEEcc
Q 015082 159 NSYALVISMEN 169 (413)
Q Consensus 159 ~~~vLVv~~e~ 169 (413)
.-.||-|++-+
T Consensus 125 nPvvLYvSGGN 135 (336)
T KOG2708|consen 125 NPVVLYVSGGN 135 (336)
T ss_pred CCEEEEEeCCc
Confidence 45667676655
No 234
>PRK07937 lipid-transfer protein; Provisional
Probab=59.32 E-value=35 Score=33.91 Aligned_cols=77 Identities=14% Similarity=0.003 Sum_probs=42.9
Q ss_pred HHHHHHHHHh-CCCCCCCcCeEEEE-ccCCCCCCChHHHHHHHcCCCCCcceEEecCc-------cchhHHHHHHHHHHH
Q 015082 83 FGAIDELFAK-TSVKPKDIGILIVN-CSLFNPTPSLSAMVINHYKLRGNIISYNLGGM-------GCSAGLISIDLANNL 153 (413)
Q Consensus 83 ~~Aa~~aL~~-ag~~~~~Id~li~~-s~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~-------~C~~~~~al~~A~~~ 153 (413)
..++++++++ +|++++|||.+=+. +. +.......+.||+..+ ..+..+|. || +++.-+.-+...
T Consensus 249 ~~~~~~a~~~aAgi~~~diD~~Ei~D~F-----~~~~l~~~e~lGl~g~-~pvN~~GG~l~ghp~ga-tG~~~~~e~~~Q 321 (352)
T PRK07937 249 SPSTALAAEAATGGDAGGVDVAELHAPF-----THQELILREALGLGDK-TKVNPSGGALAANPMFA-AGLERIGEAARH 321 (352)
T ss_pred HHHHHHHHHHhcCCCHHHCCEEEEeCCC-----hHHHHHHHHHcCCCCC-CCcCCCccchhcCchhH-HHHHHHHHHHHH
Confidence 3444556666 59999999988554 32 2333455678888522 23334421 23 344444444455
Q ss_pred HHcCCCCeEEEEE
Q 015082 154 LQVHPNSYALVIS 166 (413)
Q Consensus 154 i~~g~~~~vLVv~ 166 (413)
|+.+..+++|+.+
T Consensus 322 L~g~~a~~~l~~~ 334 (352)
T PRK07937 322 IWDGSARRALAHA 334 (352)
T ss_pred HhccCCCEEEEec
Confidence 5555567777654
No 235
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=59.31 E-value=15 Score=36.99 Aligned_cols=45 Identities=13% Similarity=0.247 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHhCCCCCCCcCeEEEE-ccCCCCCCChHHHHHHHcC
Q 015082 81 VMFGAIDELFAKTSVKPKDIGILIVN-CSLFNPTPSLSAMVINHYK 125 (413)
Q Consensus 81 la~~Aa~~aL~~ag~~~~~Id~li~~-s~~~~~~p~~a~~v~~~lG 125 (413)
-..+|++++|+++|++++|||.|-.. +.+....+.-...+.+-+|
T Consensus 255 ~~~~ai~~Al~~agi~p~dId~i~~hgtgt~~~D~~E~~al~~~fg 300 (381)
T PRK05952 255 SAIAAIQQCLARSGLTPEDIDYIHAHGTATRLNDQREANLIQALFP 300 (381)
T ss_pred HHHHHHHHHHHHhCCCHHHeeEEEccCCCCCCCcHHHHHHHHHHcC
Confidence 34799999999999999999998754 4332112222334444555
No 236
>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....
Probab=59.02 E-value=5.2 Score=32.92 Aligned_cols=75 Identities=16% Similarity=0.166 Sum_probs=39.6
Q ss_pred HHHHHHHHHhCCCCCCCcCeEEEE-ccCCCCCCChHHHHHHHcCCCC---CcceEEe----cCccchhHHHHHHHHHHHH
Q 015082 83 FGAIDELFAKTSVKPKDIGILIVN-CSLFNPTPSLSAMVINHYKLRG---NIISYNL----GGMGCSAGLISIDLANNLL 154 (413)
Q Consensus 83 ~~Aa~~aL~~ag~~~~~Id~li~~-s~~~~~~p~~a~~v~~~lGl~~---~~~~~~v----~~~~C~~~~~al~~A~~~i 154 (413)
.++++++|+++|++++|||.|... +.+....+.-+.-+.+-++-.. .++...+ .+..+++++..|..+...+
T Consensus 28 ~~~i~~al~~agi~~~~I~~i~~hg~Gt~~~D~~E~~ai~~~~~~~~~~~~~~v~s~K~~~Gh~~~asG~~~l~~~~l~l 107 (119)
T PF02801_consen 28 ARAIRRALADAGISPEDIDYIEAHGTGTPLGDAAEAEAIARVFGDSARQQPVPVGSVKSNIGHTEAASGLLSLAKALLAL 107 (119)
T ss_dssp HHHHHHHHHHHTS-GGGEEEEE----SSHHHHHHHHHHHHHHHGGGGGTSTSEEE-THHHH-B-GGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhccccccceeeeeeccccccchhhhhhhhhhhhcccccccccceeccccccccccccchHHHHHHHHHHH
Confidence 788999999999999999998865 4321111222333333333221 1222221 2234566666776666666
Q ss_pred HcC
Q 015082 155 QVH 157 (413)
Q Consensus 155 ~~g 157 (413)
+.+
T Consensus 108 ~~~ 110 (119)
T PF02801_consen 108 EHG 110 (119)
T ss_dssp HHT
T ss_pred hcC
Confidence 655
No 237
>cd02185 AroH Chorismate mutase (AroH) is one of at least five chorismate-utilizing enzymes present in microorganisms that catalyze the rearrangement of chorismate to prephenic acid, the first committed step in the biosynthesis of aromatic amino acids. In prokaryotes, chorismate mutase may be fused to prephenate dehydratase, prephenate dehydrogenase, or 3-deoxy-D-arabino-heptulosonat-7-phosphate (DAHP) as part of a bifunctional enzyme. The AroH domain forms a homotrimer with three-fold symmetry.
Probab=58.90 E-value=31 Score=28.47 Aligned_cols=50 Identities=16% Similarity=0.221 Sum_probs=35.5
Q ss_pred HHHHHHHHhCCCCCCCcCeEEEEccCC--CCCCChHHHHHHHc-CCCCCcceEEecC
Q 015082 84 GAIDELFAKTSVKPKDIGILIVNCSLF--NPTPSLSAMVINHY-KLRGNIISYNLGG 137 (413)
Q Consensus 84 ~Aa~~aL~~ag~~~~~Id~li~~s~~~--~~~p~~a~~v~~~l-Gl~~~~~~~~v~~ 137 (413)
+-.++.+++.+++++||-.++|+.|+| ..+| ...+.++ |.. +++.++...
T Consensus 24 eLl~~i~~~N~l~~edivSv~FT~T~DL~a~FP---A~aaR~~~~~~-~Vplmc~qE 76 (117)
T cd02185 24 ELLEEIIERNNIKPEDIISVIFTVTPDLDAAFP---AKAARELGGWK-YVPLMCAQE 76 (117)
T ss_pred HHHHHHHHHcCCCHHHEEEEEEEeCCcccccCh---HHHHHhcCCCC-CcceeecCc
Confidence 344566789999999999999998875 3355 3445556 454 788887774
No 238
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=56.26 E-value=23 Score=35.12 Aligned_cols=46 Identities=9% Similarity=0.057 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHhCCCCCCCcCeEEEE-ccCCCCCCChHHHHHHHcCC
Q 015082 81 VMFGAIDELFAKTSVKPKDIGILIVN-CSLFNPTPSLSAMVINHYKL 126 (413)
Q Consensus 81 la~~Aa~~aL~~ag~~~~~Id~li~~-s~~~~~~p~~a~~v~~~lGl 126 (413)
-..+|++++|+++|++++|||.|-.. +.+....+.-..-|.+-+|-
T Consensus 207 ~~~~ai~~AL~~Agl~p~dIdyIeaHgtgT~~~D~~E~~Ai~~~fg~ 253 (342)
T PRK14691 207 GAYRAMKIALRQAGITPEQVQHLNAHATSTPVGDLGEINAIKHLFGE 253 (342)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEecCCCCcCCCHHHHHHHHHHhCC
Confidence 34789999999999999999987654 53322223334555555653
No 239
>PF00814 Peptidase_M22: Glycoprotease family; InterPro: IPR000905 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M22 (clan MK). The type example being O-sialoglycoprotein endopeptidase (3.4.24.57 from EC) from Pasteurella haemolytica (Mannheimia haemolytica). O-Sialoglycoprotein endopeptidase is secreted by the bacterium P. haemolytica, and digests only proteins that are heavily sialylated, in particular those with sialylated serine and threonine residues []. Substrate proteins include glycophorin A and leukocyte surface antigens CD34, CD43, CD44 and CD45 [, ]. Removal of glycosylation, by treatment with neuraminidase, completely negates susceptibility to O-sialoglycoprotein endopeptidase digestion [, ]. Sequence similarity searches have revealed other members of the M22 family, from yeast, Mycobacterium, Haemophilus influenzae and the cyanobacterium Synechocystis []. The zinc-binding and catalytic residues of this family have not been determined, although the motif HMEGH may be a zinc-binding region [].; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis; PDB: 2A6A_A 2GEL_G 2GEM_B 1OKJ_B 3ENO_A 3EN9_B 2VWB_B 3ENH_B 2IVO_D 2IVP_A ....
Probab=56.09 E-value=6 Score=37.73 Aligned_cols=61 Identities=18% Similarity=0.130 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCcCeEEEEccCCCCCC-ChHHHHHHHcCCCCCcceEEecC
Q 015082 76 KEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTP-SLSAMVINHYKLRGNIISYNLGG 137 (413)
Q Consensus 76 ~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p-~~a~~v~~~lGl~~~~~~~~v~~ 137 (413)
++...| ...++++|++++++++|||.|.++..|+...+ -.+..++.-|...-+.+.+.|+.
T Consensus 28 ~H~~~L-~~~i~~~l~~~~~~~~did~iavt~GPGsftgLrvG~~~Ak~La~~~~~Pli~v~~ 89 (268)
T PF00814_consen 28 QHSENL-PPLIEELLKEAGISLSDIDAIAVTRGPGSFTGLRVGLSFAKGLALALNIPLIGVSH 89 (268)
T ss_dssp HHHHHH-HHHHHHHHHHHTS-GGGESEEEEEEESS-HHHHHHHHHHHHHHHHHTT--EEEEEH
T ss_pred HHHHHH-HHHHHHHHHHcCCCHHHCCEEEEecCCCcccccHHHHHHHHHHHHHhCCCeEeecc
Confidence 334444 68889999999999999999999988864322 12223333332222467777874
No 240
>PLN03173 chalcone synthase; Provisional
Probab=55.67 E-value=39 Score=34.16 Aligned_cols=51 Identities=12% Similarity=0.070 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCcCeEEEEccCCCCCCChHHHHHHHcCCCCCc
Q 015082 76 KEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNI 130 (413)
Q Consensus 76 ~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lGl~~~~ 130 (413)
+.+.+.....++++|+++|++.+|||.+++... .+.+-..++++||++++.
T Consensus 273 ~~~~~~~~~~i~~~L~~~gl~~~di~~~v~Hqg----g~~Il~~v~~~LgL~~ek 323 (391)
T PLN03173 273 GLISKNVEKSLTEAFKPLGISDWNSLFWIAHPG----GPAILDQVEAKLALKPEK 323 (391)
T ss_pred HHHHHHHHHHHHHHHHhcCCCccccCeEEECCC----cHHHHHHHHHHcCCChHH
Confidence 345666677888999999999999999766543 245667889999998644
No 241
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=55.09 E-value=33 Score=34.87 Aligned_cols=27 Identities=7% Similarity=0.192 Sum_probs=23.0
Q ss_pred HHHHHHHHHHh-CCCCCCCcCeEEEE-cc
Q 015082 82 MFGAIDELFAK-TSVKPKDIGILIVN-CS 108 (413)
Q Consensus 82 a~~Aa~~aL~~-ag~~~~~Id~li~~-s~ 108 (413)
..+|+++||++ +|++++|||.|-.. +.
T Consensus 285 ~~~ai~~Al~~~Agi~~~dId~ie~hgtg 313 (421)
T PTZ00050 285 ARRCMENALKDGANININDVDYVNAHATS 313 (421)
T ss_pred HHHHHHHHHHhccCCChhhCCEEECCCcc
Confidence 46899999999 99999999998754 43
No 242
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=54.13 E-value=19 Score=36.74 Aligned_cols=25 Identities=24% Similarity=0.454 Sum_probs=22.4
Q ss_pred HHHHHHHHHHhCCCCCCCcCeEEEE
Q 015082 82 MFGAIDELFAKTSVKPKDIGILIVN 106 (413)
Q Consensus 82 a~~Aa~~aL~~ag~~~~~Id~li~~ 106 (413)
..++++++|+++|++++|||.|...
T Consensus 291 ~~~ai~~AL~~agi~p~dId~i~~H 315 (425)
T PRK06501 291 AIGAIRAALADAGLTPEQIDYINAH 315 (425)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEec
Confidence 3688999999999999999999865
No 243
>COG3053 CitC Citrate lyase synthetase [Energy production and conversion]
Probab=54.11 E-value=1e+02 Score=29.79 Aligned_cols=99 Identities=13% Similarity=0.125 Sum_probs=56.9
Q ss_pred EEEeeeeecCCCCccccHHHHHHHHHhcCCCChhhHHHH-HHHHHHcCCCceeecCCcccCCCCCccHHHHHHHHHHHHH
Q 015082 5 SISNFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQ-KKILERSGLGDSTYLPEAVLNIPPNPSMKEARKEAEAVMF 83 (413)
Q Consensus 5 ~I~~ig~~lP~~~~~v~~~el~~~~~~~~~~~~~~~~~~-~~i~~~~GI~~R~~~~~~~~~~~~~~~ma~~~~~~~~la~ 83 (413)
||.+-++ +|. +-+..+.....+.. .-+++.. ++|.+..||.+|++-.+.. ... ...--
T Consensus 214 YiISrAT-FP~--YFiKeq~vv~~s~t-----~iDl~iFr~~iA~aLgIThRfVG~EP~------c~v-------T~~YN 272 (352)
T COG3053 214 YIISRAT-FPA--YFIKEQSVVNDSQT-----EIDLKIFRKYIAPALGITHRFVGTEPF------CRV-------TAIYN 272 (352)
T ss_pred eEEEecc-cch--hhhhhHHHHHHHHH-----HHHHHHHHHHHHHHhCcceeeecCCCC------cHH-------HHHHH
Confidence 3444433 466 66666666655432 2334433 4688999999998754431 111 11223
Q ss_pred HHHHHHHHhCCCCCCCcCeEEEEccCCCCCCChHHHHHHHc
Q 015082 84 GAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHY 124 (413)
Q Consensus 84 ~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~l 124 (413)
+..++-|++++.+..-|+.++.--......|-.|.+|...|
T Consensus 273 q~M~~~L~~~~~~~p~I~vvei~Rk~~~~~~ISAS~VR~~l 313 (352)
T COG3053 273 QQMRYWLEDPTISAPPIEVVEIERKKYQEMPISASRVRQLL 313 (352)
T ss_pred HHHHHHHhccCCCCCceEEEEeehhhhcCCcccHHHHHHHH
Confidence 44567788888888889988877321112454555555544
No 244
>COG2521 Predicted archaeal methyltransferase [General function prediction only]
Probab=53.98 E-value=9.4 Score=35.61 Aligned_cols=45 Identities=24% Similarity=0.522 Sum_probs=30.4
Q ss_pred CCCCCCeEEEEeeccchhhhhhhhh-------hccccC--CcccCCCccccccc
Q 015082 358 RIKKGDRTWQIAFGSGFKCNSAVWK-------ALRSIN--SAKEKNPWMDEIHH 402 (413)
Q Consensus 358 ~l~~Gd~vll~~~G~G~~~~a~llr-------~~~~~~--~~~~~~~~~~~~~~ 402 (413)
+++.|++|+=...|.|+++-+++=| +...-+ -++.+|||+.++-.
T Consensus 131 ~~~~G~rVLDtC~GLGYtAi~a~~rGA~~VitvEkdp~VLeLa~lNPwSr~l~~ 184 (287)
T COG2521 131 KVKRGERVLDTCTGLGYTAIEALERGAIHVITVEKDPNVLELAKLNPWSRELFE 184 (287)
T ss_pred ccccCCEeeeeccCccHHHHHHHHcCCcEEEEEeeCCCeEEeeccCCCCccccc
Confidence 4567999999999999987655322 111111 23679999998753
No 245
>PRK09585 anmK anhydro-N-acetylmuramic acid kinase; Reviewed
Probab=52.72 E-value=42 Score=33.56 Aligned_cols=58 Identities=16% Similarity=0.255 Sum_probs=41.7
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcCeEEEEccCCCCCC--------ChHHHHHHHcCCC
Q 015082 70 SMKEARKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTP--------SLSAMVINHYKLR 127 (413)
Q Consensus 70 ~ma~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p--------~~a~~v~~~lGl~ 127 (413)
.+...+....++-.+|++++++++++++++||.|=+...+-+..| .....|++++|++
T Consensus 61 ~l~~l~~~lg~~~a~av~~~~~~~~l~~~~id~IgsHGQTv~H~P~~~~TlQiG~~~~iA~~tgi~ 126 (365)
T PRK09585 61 RLAELDTALGRLFAEAVNALLAEAGLSPEDIDAIGSHGQTVRHRPGEGFTLQIGDGALIAELTGIT 126 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCccCccEEEeCCcccccCCCCCCeEEcCCHHHHHHHHCcC
Confidence 344445556778899999999999999999998876532211222 2467888999886
No 246
>PTZ00340 O-sialoglycoprotein endopeptidase-like protein; Provisional
Probab=52.41 E-value=40 Score=33.49 Aligned_cols=50 Identities=8% Similarity=0.116 Sum_probs=35.9
Q ss_pred HHHHHHHHHhCCCCCCCcCeEEEEccCCCCCCC------hHHHHHHHcCCCCCcceEEecC
Q 015082 83 FGAIDELFAKTSVKPKDIGILIVNCSLFNPTPS------LSAMVINHYKLRGNIISYNLGG 137 (413)
Q Consensus 83 ~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~------~a~~v~~~lGl~~~~~~~~v~~ 137 (413)
...++++|+++|++++|||.|.++..|+. .++ .|.-++..+ +.|.+.+++
T Consensus 54 ~~~i~~~l~~a~~~~~did~Iavt~GPGl-~~~LrVG~~~Ak~LA~a~----~~PligV~H 109 (345)
T PTZ00340 54 LSLVKEALEEAKITPSDISLICYTKGPGM-GAPLSVGAVVARTLSLLW----GKPLVGVNH 109 (345)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEecCCCc-HhhHHHHHHHHHHHHHHc----CCCEeecch
Confidence 57789999999999999999999888763 222 344444444 456677774
No 247
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=52.34 E-value=22 Score=36.03 Aligned_cols=44 Identities=16% Similarity=0.157 Sum_probs=31.0
Q ss_pred HHHHHHHHHHhCCCCCCCcCeEEEE-ccCCCCCCChHHHHHHHcC
Q 015082 82 MFGAIDELFAKTSVKPKDIGILIVN-CSLFNPTPSLSAMVINHYK 125 (413)
Q Consensus 82 a~~Aa~~aL~~ag~~~~~Id~li~~-s~~~~~~p~~a~~v~~~lG 125 (413)
..++++++|+++|++++|||.|... +.+....+.-...|.+.+|
T Consensus 277 ~~~ai~~AL~~Agi~p~dId~I~~Hgtgt~~~D~~E~~Ai~~~fg 321 (405)
T PRK09116 277 MQIAMELALKDAGLAPEDIGYVNAHGTATDRGDIAESQATAAVFG 321 (405)
T ss_pred HHHHHHHHHHHhCCCHHHcCEEECcCccCCCCCHHHHHHHHHHhC
Confidence 3688999999999999999998754 5432222334455666666
No 248
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=52.27 E-value=24 Score=35.88 Aligned_cols=44 Identities=11% Similarity=0.040 Sum_probs=29.7
Q ss_pred HHHHHHHHHHhCCCCCCCcCeEEEE-ccCCCCCCChHHHHHHHcC
Q 015082 82 MFGAIDELFAKTSVKPKDIGILIVN-CSLFNPTPSLSAMVINHYK 125 (413)
Q Consensus 82 a~~Aa~~aL~~ag~~~~~Id~li~~-s~~~~~~p~~a~~v~~~lG 125 (413)
..+|+++||+++|++++|||.|-.. +.+....+.-...+...+|
T Consensus 290 ~~~a~~~Al~~Agi~p~dId~i~~hgtgt~~~D~~E~~al~~~fg 334 (424)
T PRK06333 290 ARRAMLIALRQAGIPPEEVQHLNAHATSTPVGDLGEVAAIKKVFG 334 (424)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEeccCCCCccchHHHHHHHHHHhC
Confidence 4789999999999999999998654 4332112223345555665
No 249
>PLN03172 chalcone synthase family protein; Provisional
Probab=52.12 E-value=45 Score=33.70 Aligned_cols=79 Identities=14% Similarity=-0.026 Sum_probs=44.8
Q ss_pred hhhhccCCCccchhccccEEEecC----CChHHHHHHHHhcCCCcccchhhHHHHhhhcCCCcchHHHHHHHHHHcCCCC
Q 015082 285 LFKMKIKPYIPDFKLAFEHFCIHA----GGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIK 360 (413)
Q Consensus 285 v~~~al~~~~~~~~~did~~i~hq----~~~~~~~~i~~~lgi~~e~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~l~ 360 (413)
..+.++++ .+..++|||+++... ..+.+--.+.++||++.+-.. . -..|+++++-...|..+..-=+-.
T Consensus 109 Aa~~aL~~-ag~~~~dId~ii~~t~t~~~~P~~a~~l~~~LGl~~~~~~----~--~~~~~gC~g~~~aL~~A~~~~~~~ 181 (393)
T PLN03172 109 AAAKAIKE-WGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLKPSVKR----F--MMYQQGCFAGGTVLRLAKDLAENN 181 (393)
T ss_pred HHHHHHHH-cCCCHHHCCEEEEEccCCCcCchHHHHHHHHhCCCCCceE----E--eeeCCchHHHHHHHHHHHHHHHcC
Confidence 34444443 334578999987322 244566678999999865210 0 134667777777776543310113
Q ss_pred CCCeEEEEee
Q 015082 361 KGDRTWQIAF 370 (413)
Q Consensus 361 ~Gd~vll~~~ 370 (413)
++.++|+++.
T Consensus 182 ~~~~vLVV~~ 191 (393)
T PLN03172 182 AGSRVLVVCS 191 (393)
T ss_pred CCCeEEEEEE
Confidence 5667776553
No 250
>PLN03170 chalcone synthase; Provisional
Probab=51.91 E-value=45 Score=33.81 Aligned_cols=50 Identities=10% Similarity=0.080 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCcCeEEEEccCCCCCCChHHHHHHHcCCCCCc
Q 015082 77 EAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNI 130 (413)
Q Consensus 77 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lGl~~~~ 130 (413)
.+.+.....++++|+++|++.+|||..++... .+.+-..+.++||++++.
T Consensus 278 ~~~~~i~~~v~~~L~~~gl~~~di~~~v~Hqg----g~~il~~v~~~Lgl~~~~ 327 (401)
T PLN03170 278 LISKNIERSLEEAFKPLGITDYNSIFWVAHPG----GPAILDQVEAKVGLEKER 327 (401)
T ss_pred HHHHHHHHHHHHHHHhcCCCccccCeEEecCC----cHHHHHHHHHHcCCChHH
Confidence 45666677888999999999999998766543 244567888999998544
No 251
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=51.80 E-value=30 Score=35.24 Aligned_cols=44 Identities=11% Similarity=-0.014 Sum_probs=29.7
Q ss_pred HHHHHHHHHHhCCCCCCCcCeEEEE-ccCCCCCCChHHHHHHHcC
Q 015082 82 MFGAIDELFAKTSVKPKDIGILIVN-CSLFNPTPSLSAMVINHYK 125 (413)
Q Consensus 82 a~~Aa~~aL~~ag~~~~~Id~li~~-s~~~~~~p~~a~~v~~~lG 125 (413)
..+|++++|+++|++++|||.|-.. +.+....+.-..-|.+.+|
T Consensus 280 ~~~a~~~Al~~agi~~~did~ie~hgtgt~~~D~~E~~al~~~fg 324 (414)
T PRK08722 280 GALAMEAAMRDAGVTGEQIGYVNAHGTSTPAGDVAEIKGIKRALG 324 (414)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEccCccCCCCCHHHHHHHHHHhc
Confidence 3688999999999999999988644 5332222333445555555
No 252
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=51.06 E-value=30 Score=35.22 Aligned_cols=45 Identities=11% Similarity=-0.015 Sum_probs=31.3
Q ss_pred HHHHHHHHHHhCCCCCCCcCeEEEE-ccCCCCCCChHHHHHHHcCC
Q 015082 82 MFGAIDELFAKTSVKPKDIGILIVN-CSLFNPTPSLSAMVINHYKL 126 (413)
Q Consensus 82 a~~Aa~~aL~~ag~~~~~Id~li~~-s~~~~~~p~~a~~v~~~lGl 126 (413)
..+++++||+++|++++|||.|-.. +.+....+.-...+..-+|-
T Consensus 288 ~~~a~~~Al~~agi~~~did~ie~hgtgt~~~D~~E~~Al~~~fg~ 333 (418)
T PRK07910 288 AGHAMTRAIELAGLTPGDIDHVNAHATGTSVGDVAEGKAINNALGG 333 (418)
T ss_pred HHHHHHHHHHHhCCCHHHCCEEEcCCcCCCCCCHHHHHHHHHHhCC
Confidence 4789999999999999999998644 43322223344566666663
No 253
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=51.02 E-value=37 Score=34.83 Aligned_cols=43 Identities=14% Similarity=0.162 Sum_probs=30.8
Q ss_pred HHHHHHHHHHhCCCCCCCcCeEEEEccCCCCCCChHHHHHHHcCCCC
Q 015082 82 MFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRG 128 (413)
Q Consensus 82 a~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lGl~~ 128 (413)
+..|++++|+++|++++|||.+=+.-. .+.......+.||+.+
T Consensus 311 ~~~A~~~a~~~AGl~~~DiD~~Ei~da----Fa~~~l~~~e~lGl~~ 353 (438)
T PTZ00455 311 SRAAAQKALSMAGVKPSDLQVAEVHDC----FTIAELLMYEALGIAE 353 (438)
T ss_pred HHHHHHHHHHHcCCCHHHCcEeeeccc----ChHHHHHHHHHcCCCC
Confidence 468999999999999999998755421 1233345566788764
No 254
>KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=48.75 E-value=11 Score=36.75 Aligned_cols=58 Identities=14% Similarity=0.061 Sum_probs=44.2
Q ss_pred hhccccEEEecCCChHHHHHHHHhcCCCcccchhhHHH-HhhhcC---CCcchHHHHHHHHHHc
Q 015082 297 FKLAFEHFCIHAGGRAVLDELEKNLQLSDWHMEPSRMT-LYRFGN---TSSSSLWYELAYSEAK 356 (413)
Q Consensus 297 ~~~did~~i~hq~~~~~~~~i~~~lgi~~e~~~~s~~~-l~~~Gn---~~sasi~i~L~~~~~~ 356 (413)
..+|||+|=++-.-.-..-...+.||++++++.. +- .-..|| ++.|-++..|.+.+++
T Consensus 310 ~~sdVd~~EiNEAFs~v~lA~iK~LgldP~kVNv--~GGAValGHPlG~SGaRi~~tL~~~L~~ 371 (396)
T KOG1390|consen 310 EQSDVDYWEINEAFSVVVLANIKKLGLDPSKVNV--HGGAVALGHPLGMSGARILVTLLHTLEQ 371 (396)
T ss_pred chhhhhHHhhhhhhhHHHHHHHHHhCCCHhhccC--CCceeecCCCcCCcchhHHHHHHHHHHh
Confidence 3689999988888777777888999999999831 10 113566 5778899999998875
No 255
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=47.54 E-value=37 Score=34.28 Aligned_cols=26 Identities=19% Similarity=0.330 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHhCCCCCCCcCeEEEE
Q 015082 81 VMFGAIDELFAKTSVKPKDIGILIVN 106 (413)
Q Consensus 81 la~~Aa~~aL~~ag~~~~~Id~li~~ 106 (413)
....+++++|+++|++++|||.+...
T Consensus 280 ~~~~a~~~al~~Agl~~~dId~i~~h 305 (424)
T smart00825 280 AQARLIRQALARAGVDPADVDYVEAH 305 (424)
T ss_pred HHHHHHHHHHHHhCCCHHHccEEEee
Confidence 34679999999999999999998865
No 256
>PLN03168 chalcone synthase; Provisional
Probab=47.50 E-value=60 Score=32.73 Aligned_cols=79 Identities=18% Similarity=0.036 Sum_probs=45.7
Q ss_pred HhhhhccCCCccchhccccEEEecCC----ChHHHHHHHHhcCCCcccchhhHHHHhhhcCCCcchHHHHHHHHHHcCCC
Q 015082 284 KLFKMKIKPYIPDFKLAFEHFCIHAG----GRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRI 359 (413)
Q Consensus 284 ~v~~~al~~~~~~~~~did~~i~hq~----~~~~~~~i~~~lgi~~e~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~l 359 (413)
+..+.++++ .+..++|||++|+... .+..--.+.++||++..-.. . --.|+++++-...|..+..==+-
T Consensus 107 ~Aa~~AL~~-ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r----~--~d~~~gC~g~~~aL~~A~~~i~~ 179 (389)
T PLN03168 107 EAAQKAIKE-WGGRKSDITHIVFATTSGVNMPGADHALAKLLGLKPTVKR----V--MMYQTGCFGGASVLRVAKDLAEN 179 (389)
T ss_pred HHHHHHHHH-cCCCHHHCCEEEEECCCCCCCccHHHHHHHHhCcCCccee----e--eeeCCccHHHHHHHHHHHHHHHh
Confidence 344445544 3445799999986533 34455678999999864210 0 13456777777777544321011
Q ss_pred CCCCeEEEEe
Q 015082 360 KKGDRTWQIA 369 (413)
Q Consensus 360 ~~Gd~vll~~ 369 (413)
.++.+||+++
T Consensus 180 ~~~~~VLVV~ 189 (389)
T PLN03168 180 NKGARVLAVA 189 (389)
T ss_pred CCCCEEEEEE
Confidence 3566777655
No 257
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=46.44 E-value=43 Score=33.67 Aligned_cols=27 Identities=22% Similarity=0.375 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCeEEEE
Q 015082 80 AVMFGAIDELFAKTSVKPKDIGILIVN 106 (413)
Q Consensus 80 ~la~~Aa~~aL~~ag~~~~~Id~li~~ 106 (413)
+-..++++++|+++|++++|||.+...
T Consensus 279 ~~~~~a~~~al~~Agi~~~did~i~~h 305 (421)
T cd00833 279 EAQAALIRRAYARAGVDPSDIDYVEAH 305 (421)
T ss_pred HHHHHHHHHHHHHhCCCHHHCcEEEee
Confidence 344689999999999999999998865
No 258
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=46.14 E-value=41 Score=34.44 Aligned_cols=25 Identities=8% Similarity=0.252 Sum_probs=22.0
Q ss_pred HHHHHHHHHHhCCCCCCCcCeEEEE
Q 015082 82 MFGAIDELFAKTSVKPKDIGILIVN 106 (413)
Q Consensus 82 a~~Aa~~aL~~ag~~~~~Id~li~~ 106 (413)
..+|+++||+++|++++|||.|-..
T Consensus 301 ~~~a~~~Al~~Agi~~~dId~ve~h 325 (437)
T PLN02836 301 AVLAMTRALQQSGLHPNQVDYVNAH 325 (437)
T ss_pred HHHHHHHHHHHcCCCHhHcCEEEcc
Confidence 3678999999999999999998754
No 259
>PRK13410 molecular chaperone DnaK; Provisional
Probab=45.19 E-value=84 Score=34.21 Aligned_cols=67 Identities=12% Similarity=0.112 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCeEEEEccCCCCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHH
Q 015082 78 AEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISID 148 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~ 148 (413)
..+-..+.++++|+++|+++++||.|++....- -+|.+-..+.+.+|..+ ...++..-|.+.-.|++
T Consensus 307 l~~r~~~~i~~~L~~ag~~~~dId~VvLVGGss-RiP~V~~~l~~~fg~~~---~~~~npdeaVA~GAAi~ 373 (668)
T PRK13410 307 LLDRLLRPVKRALKDAGLSPEDIDEVVLVGGST-RMPMVQQLVRTLIPREP---NQNVNPDEVVAVGAAIQ 373 (668)
T ss_pred HHHHHHHHHHHHHHHcCCChhhCcEEEEECCcc-ccHHHHHHHHHHcCCCc---ccCCCCchHHHHhHHHH
Confidence 333445567899999999999999998763211 37888888888888642 33445333444444443
No 260
>PRK08304 stage V sporulation protein AD; Validated
Probab=44.04 E-value=88 Score=30.88 Aligned_cols=85 Identities=16% Similarity=0.191 Sum_probs=49.0
Q ss_pred HHHHHHHHHhCCCCCCCcCeEEEEccCCCCCCChHHHHHHHcCCCC-----C--cceEEec-------Cc--cchhHHHH
Q 015082 83 FGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRG-----N--IISYNLG-------GM--GCSAGLIS 146 (413)
Q Consensus 83 ~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lGl~~-----~--~~~~~v~-------~~--~C~~~~~a 146 (413)
+..+.+=|++.|.+|+|-|+|+.+--.. ....+...+..+-|++- + ...||.. +. ||++.+ -
T Consensus 211 ~dti~~h~~d~~~~~~~yDli~tGDlg~-vG~~i~~~ll~~~g~~~~~~~~DcG~~iy~~~~q~~~aGgSGc~csa~v-~ 288 (337)
T PRK08304 211 ADTIQQHFKDTGRSPEDYDLIVTGDLGR-VGREILKELLKEEGYDIGDNYNDCGLMIYDSEQQDVFAGGSGCACSAVV-T 288 (337)
T ss_pred HHHHHHHHHHcCCChhhccEEEEcchHH-HHHHHHHHHHHHhCCChhhcccccCeEEeccCCCcccCCCcccchhHHH-H
Confidence 4445566789999999999999874210 11234455554445421 1 1334311 12 344322 2
Q ss_pred HHHHHHHHHcCCCCeEEEEEEcc
Q 015082 147 IDLANNLLQVHPNSYALVISMEN 169 (413)
Q Consensus 147 l~~A~~~i~~g~~~~vLVv~~e~ 169 (413)
--.-...++.|..++||+|+.-.
T Consensus 289 ~~~~~~~~~~g~~~rvl~v~tGa 311 (337)
T PRK08304 289 YGYLLKELQKGKLKRVLVVATGA 311 (337)
T ss_pred HHHHHHHHhcCCceEEEEEEchh
Confidence 33445566788899999999764
No 261
>PRK05183 hscA chaperone protein HscA; Provisional
Probab=43.63 E-value=1e+02 Score=33.25 Aligned_cols=44 Identities=11% Similarity=0.135 Sum_probs=35.0
Q ss_pred HHHHHHHHHHhCCCCCCCcCeEEEEc-cCCCCCCChHHHHHHHcCCC
Q 015082 82 MFGAIDELFAKTSVKPKDIGILIVNC-SLFNPTPSLSAMVINHYKLR 127 (413)
Q Consensus 82 a~~Aa~~aL~~ag~~~~~Id~li~~s-~~~~~~p~~a~~v~~~lGl~ 127 (413)
..+.++++|+++++.+++||.|++.. +. .+|.+-..|.+.+|..
T Consensus 311 ~~~~i~~~L~~a~~~~~~i~~ViLvGGss--riP~v~~~l~~~fg~~ 355 (616)
T PRK05183 311 TLLACRRALRDAGVEADEVKEVVMVGGST--RVPLVREAVGEFFGRT 355 (616)
T ss_pred HHHHHHHHHHHcCCCcccCCEEEEECCcc--cChHHHHHHHHHhccC
Confidence 34556899999999999999999763 32 3788888999988865
No 262
>TIGR02845 spore_V_AD stage V sporulation protein AD. Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.
Probab=43.46 E-value=91 Score=30.65 Aligned_cols=86 Identities=13% Similarity=0.226 Sum_probs=47.7
Q ss_pred HHHHHHHHHhCCCCCCCcCeEEEEccCCCCCCChHHHHHHHcCCCC-----C--cceEE------ecCccchh-HHHHHH
Q 015082 83 FGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRG-----N--IISYN------LGGMGCSA-GLISID 148 (413)
Q Consensus 83 ~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lGl~~-----~--~~~~~------v~~~~C~~-~~~al~ 148 (413)
+..+.+=|++.|.+|++-|.|+.+--. .....+...+..+=|++- + ...|| -.+.||.- .+.---
T Consensus 205 ~dti~~h~~d~~~~~~~yd~i~tgdlg-~vg~~i~~~ll~~~g~~~~~~~~dcg~~iy~~~~~~~aggsgc~csa~v~~~ 283 (327)
T TIGR02845 205 ADTIEAHFKDTGRSVDDYDLIVTGDLA-RVGSEILRKLLKERGYDVTERYDDCGVMIYRPDQQVFAGGSGCACSAVVTYG 283 (327)
T ss_pred HHHHHHHHHHcCCChhhccEEEecchH-HHHHHHHHHHHHHcCCChhhccccCCeEEEcCCCcccCCCcccchhHHHHHH
Confidence 444566678999999999999987421 011233444444444421 1 11222 22234421 222233
Q ss_pred HHHHHHHcCCCCeEEEEEEcc
Q 015082 149 LANNLLQVHPNSYALVISMEN 169 (413)
Q Consensus 149 ~A~~~i~~g~~~~vLVv~~e~ 169 (413)
.-...++.|..+++|+|+.-.
T Consensus 284 ~~~~~~~~g~~~r~l~v~tga 304 (327)
T TIGR02845 284 HILKEMLRGKLKKVLVVATGA 304 (327)
T ss_pred HHHHHHhcCcceEEEEEEchh
Confidence 444566788899999999764
No 263
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=43.42 E-value=18 Score=35.85 Aligned_cols=46 Identities=11% Similarity=0.093 Sum_probs=30.1
Q ss_pred HHHHHHHHHHhCCCCCCCcCeEE-EEccCCCCCCChHHHHHHHcCCC
Q 015082 82 MFGAIDELFAKTSVKPKDIGILI-VNCSLFNPTPSLSAMVINHYKLR 127 (413)
Q Consensus 82 a~~Aa~~aL~~ag~~~~~Id~li-~~s~~~~~~p~~a~~v~~~lGl~ 127 (413)
+..|.++||+++|+.|+|||.|= ++|++..-.-.-+..|.+-++-.
T Consensus 303 a~~am~raL~~Agl~pe~i~YvNAHATST~~GD~aE~~Ai~~vf~~~ 349 (440)
T KOG1394|consen 303 AVLAMERALKDAGLSPEDIDYVNAHATSTPLGDAAEAEAIKRVFGEH 349 (440)
T ss_pred HHHHHHHHHHHcCCChhhcCeeecccccCcCchHHHHHHHHHHhccC
Confidence 47889999999999999999986 44543111112234455555543
No 264
>PRK12404 stage V sporulation protein AD; Provisional
Probab=42.53 E-value=95 Score=30.54 Aligned_cols=86 Identities=8% Similarity=0.139 Sum_probs=48.9
Q ss_pred HHHHHHHHHhCCCCCCCcCeEEEEccCCCCCCChHHHHHHHcCCCC------C--cceEEe------cCccch-hHHHHH
Q 015082 83 FGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRG------N--IISYNL------GGMGCS-AGLISI 147 (413)
Q Consensus 83 ~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lGl~~------~--~~~~~v------~~~~C~-~~~~al 147 (413)
+..+.+=|++.|.+|++-|+|+.+--. .....+...+..+=|++- + ...||- .+.||. +.+.--
T Consensus 209 ~dti~~h~~d~~~~~~~yDlI~TGDLg-~vG~~i~~~ll~~~g~~~~~~~~~DCG~~iyd~~~~~~aGgSGcgcsA~v~~ 287 (334)
T PRK12404 209 VDTIEAHLRDRQIDASYYDLIVTGDLG-HVGREIAKDLLHKHGVKVPEEQFQDCGLLIYREGQPVIAGASGPGCSATVTY 287 (334)
T ss_pred HHHHHHHHHHhCCChhhccEEEEcchH-HHHHHHHHHHHHHcCCCCCcccccccCeEEecCCCcccCCCcccchHHHHHH
Confidence 444566678999999999999987421 011234455555445431 0 112221 223442 122233
Q ss_pred HHHHHHHHcCCCCeEEEEEEcc
Q 015082 148 DLANNLLQVHPNSYALVISMEN 169 (413)
Q Consensus 148 ~~A~~~i~~g~~~~vLVv~~e~ 169 (413)
-.....++.|..++||+|+.-.
T Consensus 288 g~~~~~~~~g~~~rvL~v~TGA 309 (334)
T PRK12404 288 GHLLNRMKRGELKRILVVATGA 309 (334)
T ss_pred HHHHHHHhcCCceEEEEEEchh
Confidence 4445667788899999999764
No 265
>TIGR03285 methan_mark_14 putative methanogenesis marker protein 14. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=41.95 E-value=51 Score=32.73 Aligned_cols=41 Identities=12% Similarity=0.251 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCcCeEEEEcc--CCCCCC
Q 015082 74 ARKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCS--LFNPTP 114 (413)
Q Consensus 74 ~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~--~~~~~p 114 (413)
.+|...||......+++++++++.+|+|+|+=++. ..+..|
T Consensus 61 tresV~elV~dtl~e~~k~A~l~i~DL~FVVRSTGV~Agf~sp 103 (445)
T TIGR03285 61 TRESVAELVKDTLKESLKKAGLDIDDLDFVVRSTGVTAGFASP 103 (445)
T ss_pred cHHHHHHHHHHHHHHHHHHcCCChhhccEEEeccceeeccCCH
Confidence 46778899999999999999999999999987653 344445
No 266
>TIGR01991 HscA Fe-S protein assembly chaperone HscA. The Heat Shock Cognate proteins HscA and HscB act together as chaperones. HscA resembles DnaK but belongs in a separate clade. The apparent function is to aid assembly of iron-sulfur cluster proteins. Homologs from Buchnera and Wolbachia are clearly in the same clade but are highly derived and score lower than some examples of DnaK.
Probab=41.27 E-value=1.5e+02 Score=31.85 Aligned_cols=44 Identities=9% Similarity=0.125 Sum_probs=35.4
Q ss_pred HHHHHHHHHHhCCCCCCCcCeEEEEc-cCCCCCCChHHHHHHHcCCC
Q 015082 82 MFGAIDELFAKTSVKPKDIGILIVNC-SLFNPTPSLSAMVINHYKLR 127 (413)
Q Consensus 82 a~~Aa~~aL~~ag~~~~~Id~li~~s-~~~~~~p~~a~~v~~~lGl~ 127 (413)
..+.++++|+++++++++||.|++.. +. .+|.+-..+.+.+|..
T Consensus 295 i~~~i~~~L~~a~~~~~~id~ViLvGGss--riP~V~~~l~~~f~~~ 339 (599)
T TIGR01991 295 TLSICRRALRDAGLSVEEIKGVVLVGGST--RMPLVRRAVAELFGQE 339 (599)
T ss_pred HHHHHHHHHHHcCCChhhCCEEEEECCcC--CChHHHHHHHHHhCCC
Confidence 45667899999999999999998763 32 3788888999988865
No 267
>PLN02854 3-ketoacyl-CoA synthase
Probab=41.09 E-value=1e+02 Score=32.41 Aligned_cols=42 Identities=12% Similarity=0.199 Sum_probs=32.0
Q ss_pred HHHHHHHHHHhCCCCC------CCcCeEEEEccCCCCCCChHHHHHHHcCCC
Q 015082 82 MFGAIDELFAKTSVKP------KDIGILIVNCSLFNPTPSLSAMVINHYKLR 127 (413)
Q Consensus 82 a~~Aa~~aL~~ag~~~------~~Id~li~~s~~~~~~p~~a~~v~~~lGl~ 127 (413)
+...+++.|.++|+++ ++||+++.... ....-..++++||++
T Consensus 387 ~~~~i~~~L~~~gl~~~~pd~~~didhf~iHqg----gr~IId~v~k~LgL~ 434 (521)
T PLN02854 387 FVTLVRRKLLKAKVKPYIPDFKLAFEHFCIHAG----GRAVLDELQKNLQLS 434 (521)
T ss_pred HHHHHHHHHHHcCCCccCCcccccCcEEEECCC----CHHHHHHHHHHcCCC
Confidence 5667889999999987 68988776643 134556889999997
No 268
>CHL00094 dnaK heat shock protein 70
Probab=40.91 E-value=1.2e+02 Score=32.71 Aligned_cols=54 Identities=7% Similarity=0.141 Sum_probs=39.4
Q ss_pred HHHHHHHHHH---HHHHHHHHHhCCCCCCCcCeEEEEccCCCCCCChHHHHHHHcCCC
Q 015082 73 EARKEAEAVM---FGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLR 127 (413)
Q Consensus 73 ~~~~~~~~la---~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lGl~ 127 (413)
.+++.+.++. ...++++|+++++++++||.|++....- .+|.+-..+.+.+|..
T Consensus 299 ~fe~l~~~l~~~~~~~i~~~L~~a~~~~~~i~~ViLvGGss-riP~v~~~l~~~fg~~ 355 (621)
T CHL00094 299 KFEELCSDLINRCRIPVENALKDAKLDKSDIDEVVLVGGST-RIPAIQELVKKLLGKK 355 (621)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCChhhCcEEEEECCcc-CChHHHHHHHHHhCCC
Confidence 4444444444 4457899999999999999998763211 3788888999988864
No 269
>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....
Probab=39.62 E-value=22 Score=29.09 Aligned_cols=57 Identities=16% Similarity=0.052 Sum_probs=31.2
Q ss_pred hhccccEEEecCCChHHHHHH-----HHhcCCCc--ccchhhHHHHhhhcCCCcchHHHHHHHHH
Q 015082 297 FKLAFEHFCIHAGGRAVLDEL-----EKNLQLSD--WHMEPSRMTLYRFGNTSSSSLWYELAYSE 354 (413)
Q Consensus 297 ~~~did~~i~hq~~~~~~~~i-----~~~lgi~~--e~~~~s~~~l~~~Gn~~sasi~i~L~~~~ 354 (413)
.++|||++..|-.+....+.. .+.++-.. ..+. ....-..+||+.+++=.+.|...+
T Consensus 41 ~~~~I~~i~~hg~Gt~~~D~~E~~ai~~~~~~~~~~~~~~-v~s~K~~~Gh~~~asG~~~l~~~~ 104 (119)
T PF02801_consen 41 SPEDIDYIEAHGTGTPLGDAAEAEAIARVFGDSARQQPVP-VGSVKSNIGHTEAASGLLSLAKAL 104 (119)
T ss_dssp -GGGEEEEE----SSHHHHHHHHHHHHHHHGGGGGTSTSE-EE-THHHH-B-GGGHHHHHHHHHH
T ss_pred ccccceeeeeeccccccchhhhhhhhhhhhcccccccccc-eeccccccccccccchHHHHHHHH
Confidence 478999999999888766543 34444322 1121 023445799999999988887543
No 270
>PLN03171 chalcone synthase-like protein; Provisional
Probab=39.58 E-value=97 Score=31.34 Aligned_cols=87 Identities=8% Similarity=0.130 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHHHHh---------CCCCCCCcCeEEEEccCCCCCCChHHHHHHHcCCCCCcce-----E-EecCccch
Q 015082 77 EAEAVMFGAIDELFAK---------TSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIIS-----Y-NLGGMGCS 141 (413)
Q Consensus 77 ~~~~la~~Aa~~aL~~---------ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lGl~~~~~~-----~-~v~~~~C~ 141 (413)
...++..++++++|++ +|++++||+.++ ... ...+-..+.++||++++... + +..++.++
T Consensus 276 ~vp~~i~~~l~~~l~~~l~~~~~~~~g~~~~di~~~~-Hq~----~~~il~~v~~~Lgl~~ek~~~s~~~l~~yGNtssa 350 (399)
T PLN03171 276 QVPGLIGDNIERCLLDAFAPLLGGDGGAEWNDLFWAV-HPG----SSAILDQVDAALGLEPEKLAASRRVLSDYGNMFGA 350 (399)
T ss_pred hHHHHHHHHHHHHHHHHHHhhcccccCCCcccceEEE-cCC----cHHHHHHHHHHcCCCHHHhHHHHHHHHHhCcchhh
Confidence 3445555666666665 578889988764 221 13556788999999854332 2 22223444
Q ss_pred hHHHHHHHHHHHHHc--CCC---CeEEEEEEc
Q 015082 142 AGLISIDLANNLLQV--HPN---SYALVISME 168 (413)
Q Consensus 142 ~~~~al~~A~~~i~~--g~~---~~vLVv~~e 168 (413)
+...+|..+..-.+. .+. +++|+++.-
T Consensus 351 Sip~~L~~~~~~~~~~~~~G~~~d~vll~~fG 382 (399)
T PLN03171 351 TVIFALDELRRQMEEAAAAGAWPELGVMMAFG 382 (399)
T ss_pred hHHHHHHHHHhhHhhcCCCCCCcceEEEEEEc
Confidence 455566544332211 122 677777643
No 271
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=39.30 E-value=1.2e+02 Score=30.69 Aligned_cols=41 Identities=15% Similarity=0.093 Sum_probs=28.5
Q ss_pred HHHHHHHHHhCCCC--CCCcCeEEEE-ccCCCCCCChHHHHHHHcCCCC
Q 015082 83 FGAIDELFAKTSVK--PKDIGILIVN-CSLFNPTPSLSAMVINHYKLRG 128 (413)
Q Consensus 83 ~~Aa~~aL~~ag~~--~~~Id~li~~-s~~~~~~p~~a~~v~~~lGl~~ 128 (413)
..|++++++++|++ ++|||.+-+. +. ........+.||+.+
T Consensus 259 ~~Aa~~a~~~AGi~~p~~DiD~~ei~D~F-----t~~~l~~~e~lG~~~ 302 (385)
T PRK06066 259 RIAADMAYKMAGIESPRKEVDAAEVDDRY-----SYKELQHIEALRLSE 302 (385)
T ss_pred HHHHHHHHHHcCCCCCHHHCcEEEEecCC-----hHHHHHHHHHcCCCC
Confidence 37999999999997 6999988654 32 222344456677653
No 272
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=39.08 E-value=35 Score=34.39 Aligned_cols=41 Identities=17% Similarity=0.110 Sum_probs=28.2
Q ss_pred HHHHHHHHHHhCCCCCCCcCeEEEE-ccCCCCCCChHHHHHHHcCCC
Q 015082 82 MFGAIDELFAKTSVKPKDIGILIVN-CSLFNPTPSLSAMVINHYKLR 127 (413)
Q Consensus 82 a~~Aa~~aL~~ag~~~~~Id~li~~-s~~~~~~p~~a~~v~~~lGl~ 127 (413)
...|++++++++|++++|||.+-+. +. +.......+.||+.
T Consensus 257 ~~~aa~~a~~~AGi~~~did~~elyD~F-----s~~~~~~~E~lGl~ 298 (388)
T PRK08142 257 AAWSGPAAFAEAGVTPADIKYASIYDSF-----TITVLMQLEDLGFC 298 (388)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEeccc-----hHHHHHHHHHcCCC
Confidence 4679999999999999999977544 32 22223334566663
No 273
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=37.49 E-value=91 Score=31.93 Aligned_cols=41 Identities=12% Similarity=0.125 Sum_probs=29.1
Q ss_pred HHHHHHHHHhCCCC--CCCcCeEEEE-ccCCCCCCChHHHHHHHcCCCC
Q 015082 83 FGAIDELFAKTSVK--PKDIGILIVN-CSLFNPTPSLSAMVINHYKLRG 128 (413)
Q Consensus 83 ~~Aa~~aL~~ag~~--~~~Id~li~~-s~~~~~~p~~a~~v~~~lGl~~ 128 (413)
..|++++++++|++ ++|||.+-+. +. +.......+.||+.+
T Consensus 296 ~~a~~~a~~~AGl~~~~~DiD~~Ei~D~F-----a~~~l~~lE~lGl~~ 339 (430)
T PRK06365 296 RMAAKEAYEMAGITDPLNDLDLIELHDAY-----TSSEIQTYEDLGLCK 339 (430)
T ss_pred HHHHHHHHHHcCCCCCHHHCCEEEeecCC-----cHHHHHHHHHcCCCC
Confidence 57999999999997 7999988654 33 222344456677764
No 274
>PLN02377 3-ketoacyl-CoA synthase
Probab=36.85 E-value=95 Score=32.53 Aligned_cols=75 Identities=4% Similarity=-0.091 Sum_probs=41.3
Q ss_pred hhhhccCCCccchhccccEEEecC----CChHHHHHHHHhcCCCcccchhhHHHHhhhcCCCcchHHHHHH---HHHHcC
Q 015082 285 LFKMKIKPYIPDFKLAFEHFCIHA----GGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELA---YSEAKG 357 (413)
Q Consensus 285 v~~~al~~~~~~~~~did~~i~hq----~~~~~~~~i~~~lgi~~e~~~~s~~~l~~~Gn~~sasi~i~L~---~~~~~g 357 (413)
..+.++++ .+..++|||.++.+- +.+..--.+.++||+..+-.. ++ .+-+|+++-+++|+ ++++.+
T Consensus 179 A~~~aL~k-aGi~p~dID~LVv~cS~~~~~PSlaa~V~~~LGlr~~v~a--fd----L~gmGCsggl~aL~lA~~ll~~~ 251 (502)
T PLN02377 179 ALDNLFAN-TNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRS--FN----LGGMGCSAGVIAVDLAKDMLQVH 251 (502)
T ss_pred HHHHHHHH-cCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhCCCCCCeE--Ee----cccchhhHHHHHHHHHHHHHHcC
Confidence 33344433 334579999998732 345677788999999754321 12 23344455555554 344332
Q ss_pred CCCCCCeEEEEe
Q 015082 358 RIKKGDRTWQIA 369 (413)
Q Consensus 358 ~l~~Gd~vll~~ 369 (413)
++.++|+++
T Consensus 252 ---~~~~aLVVs 260 (502)
T PLN02377 252 ---RNTYAVVVS 260 (502)
T ss_pred ---CCCEEEEEE
Confidence 455555444
No 275
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=36.85 E-value=37 Score=31.12 Aligned_cols=38 Identities=26% Similarity=0.253 Sum_probs=24.9
Q ss_pred CcchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhhhh
Q 015082 342 SSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSA 379 (413)
Q Consensus 342 ~sasi~i~L~~~~~~g~l~~Gd~vll~~~G~G~~~~a~ 379 (413)
.+-+.|...+++++.=.++||++||=++.|.|+..+.+
T Consensus 53 ~~is~P~~~a~~l~~L~l~pg~~VLeIGtGsGY~aAll 90 (209)
T PF01135_consen 53 QTISAPSMVARMLEALDLKPGDRVLEIGTGSGYQAALL 90 (209)
T ss_dssp EEE--HHHHHHHHHHTTC-TT-EEEEES-TTSHHHHHH
T ss_pred eechHHHHHHHHHHHHhcCCCCEEEEecCCCcHHHHHH
Confidence 44555667777777657999999999999999875433
No 276
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]
Probab=36.16 E-value=36 Score=32.28 Aligned_cols=29 Identities=24% Similarity=0.392 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCeEEEE
Q 015082 78 AEAVMFGAIDELFAKTSVKPKDIGILIVN 106 (413)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~ 106 (413)
-.||...|++++.+++|++|.||+.|-+.
T Consensus 270 gfdm~~~aa~~l~aksgltpndvqvielh 298 (408)
T KOG1406|consen 270 GFDMTRLAAKRLFAKSGLTPNDVQVIELH 298 (408)
T ss_pred cchHHHHHHHHHHHHcCCCcccceEEEee
Confidence 56888999999999999999999988665
No 277
>COG3072 CyaA Adenylate cyclase [Nucleotide transport and metabolism]
Probab=35.32 E-value=26 Score=37.09 Aligned_cols=57 Identities=11% Similarity=0.059 Sum_probs=40.5
Q ss_pred hhccccEEEecCCCh------------HHHHHHHHhcCCCcccchhhHHHHhhh-----------cCCCcchHHHHHHHH
Q 015082 297 FKLAFEHFCIHAGGR------------AVLDELEKNLQLSDWHMEPSRMTLYRF-----------GNTSSSSLWYELAYS 353 (413)
Q Consensus 297 ~~~did~~i~hq~~~------------~~~~~i~~~lgi~~e~~~~s~~~l~~~-----------Gn~~sasi~i~L~~~ 353 (413)
..+|+|.|++|+... ..++.|++..|+...-+ ..+-.+| +||||+--++.|++.
T Consensus 114 ~sSDLD~WVCh~~~Ls~~er~~L~rKc~lie~WA~s~gvEvnff---L~D~~RFr~~~~s~~l~gedcGstQh~LLLDEF 190 (853)
T COG3072 114 CSSDLDIWVCHQDWLSTEERQLLQRKCSLLEDWAASQGVEVNFF---LIDENRFRQHNESGSLGGEDCGSTQHILLLDEF 190 (853)
T ss_pred cccccceEEEecccCChhHHHHHHHHHHHHHHHHHHhCceEEEE---EecHHhhhcccccCCCCCcCCcchhhhHHHHHH
Confidence 358999999999842 34566888888754433 2233333 599999999999987
Q ss_pred HHc
Q 015082 354 EAK 356 (413)
Q Consensus 354 ~~~ 356 (413)
.++
T Consensus 191 YRS 193 (853)
T COG3072 191 YRS 193 (853)
T ss_pred HHH
Confidence 764
No 278
>PTZ00186 heat shock 70 kDa precursor protein; Provisional
Probab=35.29 E-value=1.2e+02 Score=32.84 Aligned_cols=70 Identities=9% Similarity=0.028 Sum_probs=46.2
Q ss_pred HHHHHHHHH---HHHHHHHHHHhCCCCCCCcCeEEEEc-cCCCCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHH
Q 015082 73 EARKEAEAV---MFGAIDELFAKTSVKPKDIGILIVNC-SLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISI 147 (413)
Q Consensus 73 ~~~~~~~~l---a~~Aa~~aL~~ag~~~~~Id~li~~s-~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al 147 (413)
++++.+.++ ....++++|+++|+++++||.|++.. ++ -+|.+-..|.+.+|-.+ ...++-.-|.+.-+|+
T Consensus 324 efe~l~~~l~~r~~~~v~~~L~~a~~~~~dId~VvLVGGss--riP~V~~~l~~~fg~~~---~~~~nPdeaVA~GAAi 397 (657)
T PTZ00186 324 KFEGITQRLIERSIAPCKQCMKDAGVELKEINDVVLVGGMT--RMPKVVEEVKKFFQKDP---FRGVNPDEAVALGAAT 397 (657)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCChhhCCEEEEECCcc--cChHHHHHHHHHhCCCc---cccCCCchHHHHhHHH
Confidence 444444444 34557889999999999999998763 32 37888899999998642 2345533444444444
No 279
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=34.79 E-value=80 Score=31.98 Aligned_cols=24 Identities=17% Similarity=0.339 Sum_probs=21.5
Q ss_pred HHHHHHHHHhCCCCCCCcCeEEEE
Q 015082 83 FGAIDELFAKTSVKPKDIGILIVN 106 (413)
Q Consensus 83 ~~Aa~~aL~~ag~~~~~Id~li~~ 106 (413)
.++++++|+++|++++|||.|...
T Consensus 284 ~~a~~~Al~~Agi~~~dId~v~~h 307 (410)
T PRK07103 284 MRVIRAALRRAGLGPEDIDYVNPH 307 (410)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEcc
Confidence 589999999999999999988754
No 280
>PRK06059 lipid-transfer protein; Provisional
Probab=34.53 E-value=75 Score=32.04 Aligned_cols=58 Identities=12% Similarity=-0.034 Sum_probs=39.1
Q ss_pred hhccccEEEecCCChHHHHHHHHhcCCCcc------------------cchhhHHHHhhhcCCCcchHHHHHHHHHH
Q 015082 297 FKLAFEHFCIHAGGRAVLDELEKNLQLSDW------------------HMEPSRMTLYRFGNTSSSSLWYELAYSEA 355 (413)
Q Consensus 297 ~~~did~~i~hq~~~~~~~~i~~~lgi~~e------------------~~~~s~~~l~~~Gn~~sasi~i~L~~~~~ 355 (413)
.++|||.+=+|-......-...|.||+.+. .+.. .-=+--+||...++=...+.++..
T Consensus 289 ~~~Did~~El~d~f~~~~l~~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~-~GG~la~Ghp~gatG~~~~~e~~~ 364 (399)
T PRK06059 289 GPEDLSLAEVYDLSTALELDWYEHLGLCPKGEAEALLRSGATTLGGRIPVNP-SGGLACFGEAIPAQAIAQVCELTW 364 (399)
T ss_pred CHHHCcEEeecccChHHHHHHHHHcCCCCCCcHHHHHHCCCccCCCCeeecC-CCccccCCccCCccHHHHHHHHHH
Confidence 368999999999865555555699999753 2210 000224799998888777777655
No 281
>PF12633 Adenyl_cycl_N: Adenylate cyclase NT domain; InterPro: IPR024685 Adenylate cyclase is the enzyme responsible for the synthesis of cAMP from ATP. On the basis of sequence similarity, it has been proposed that there are three different classes of adenylate cyclases [, ]. Class I cyclases are found in enterobacteria and related Gram-negative bacteria. This entry represents the N-terminal domain of class-I adenylate cyclases.
Probab=33.72 E-value=38 Score=30.90 Aligned_cols=56 Identities=5% Similarity=0.014 Sum_probs=38.9
Q ss_pred hccccEEEecCCCh------------HHHHHHHHhcCCC-------cccchhhHHHHh----hhcCCCcchHHHHHHHHH
Q 015082 298 KLAFEHFCIHAGGR------------AVLDELEKNLQLS-------DWHMEPSRMTLY----RFGNTSSSSLWYELAYSE 354 (413)
Q Consensus 298 ~~did~~i~hq~~~------------~~~~~i~~~lgi~-------~e~~~~s~~~l~----~~Gn~~sasi~i~L~~~~ 354 (413)
.+|+|.|++|+... ..++.+++.+|+. ++++. .+-. .--|+|||--++-|++..
T Consensus 114 ~SDlDiWvCh~~~L~~~~~~~Lq~K~~~i~~WA~~~gvEv~FfLmd~~~fr---~~~~~~~~~~E~~GSaQh~LLLdEFY 190 (204)
T PF12633_consen 114 SSDLDIWVCHDSDLSPEERQLLQQKCDLIEQWAASFGVEVHFFLMDEERFR---HNRSGSPLTGESCGSAQHLLLLDEFY 190 (204)
T ss_pred CCCCeEEEEcCCCCCHHHHHHHHHHHHHHHHHHHHcCCEEEEEEECHHHHh---cCCcccCCCCCCChHHHHHHHHHHHH
Confidence 68999999999743 2345677888874 44442 1111 124799999999999988
Q ss_pred Hc
Q 015082 355 AK 356 (413)
Q Consensus 355 ~~ 356 (413)
++
T Consensus 191 RT 192 (204)
T PF12633_consen 191 RT 192 (204)
T ss_pred HH
Confidence 75
No 282
>PLN03184 chloroplast Hsp70; Provisional
Probab=33.20 E-value=1.2e+02 Score=33.05 Aligned_cols=62 Identities=13% Similarity=0.062 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHhCCCCCCCcCeEEEEc-cCCCCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHH
Q 015082 81 VMFGAIDELFAKTSVKPKDIGILIVNC-SLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISI 147 (413)
Q Consensus 81 la~~Aa~~aL~~ag~~~~~Id~li~~s-~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al 147 (413)
=..+.++++|+++++++++||.|++.. +. -+|.+-..|.+.+|..+ ...++..-|.+.-.|+
T Consensus 347 r~~~~i~~~L~~a~~~~~dId~ViLvGGss--riP~V~~~i~~~fg~~~---~~~~npdeaVA~GAAi 409 (673)
T PLN03184 347 RCKTPVENALRDAKLSFKDIDEVILVGGST--RIPAVQELVKKLTGKDP---NVTVNPDEVVALGAAV 409 (673)
T ss_pred HHHHHHHHHHHHcCCChhHccEEEEECCcc--ccHHHHHHHHHHhCCCc---ccccCcchHHHHHHHH
Confidence 344567889999999999999998763 32 37888889999888652 3345533444333344
No 283
>PTZ00009 heat shock 70 kDa protein; Provisional
Probab=33.09 E-value=1.2e+02 Score=32.77 Aligned_cols=52 Identities=4% Similarity=0.204 Sum_probs=38.3
Q ss_pred HHHHHHHHH---HHHHHHHHHHhCCCCCCCcCeEEEEc-cCCCCCCChHHHHHHHcCC
Q 015082 73 EARKEAEAV---MFGAIDELFAKTSVKPKDIGILIVNC-SLFNPTPSLSAMVINHYKL 126 (413)
Q Consensus 73 ~~~~~~~~l---a~~Aa~~aL~~ag~~~~~Id~li~~s-~~~~~~p~~a~~v~~~lGl 126 (413)
++++.+.++ ....++++|+++++++++||.|++.. +. -+|..-..|.+.+|-
T Consensus 303 ~fe~l~~~l~~~~~~~i~~~L~~a~~~~~~i~~ViLvGGss--riP~v~~~i~~~f~~ 358 (653)
T PTZ00009 303 RFEELCGDYFRNTLQPVEKVLKDAGMDKRSVHEVVLVGGST--RIPKVQSLIKDFFNG 358 (653)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCcEEEEECCCC--CChhHHHHHHHHhCC
Confidence 444444444 34567899999999999999998763 22 378888889888864
No 284
>COG4401 AroH Chorismate mutase [Amino acid transport and metabolism]
Probab=32.36 E-value=1.4e+02 Score=24.35 Aligned_cols=52 Identities=12% Similarity=0.059 Sum_probs=37.2
Q ss_pred HHHHHHhCCCCCCCcCeEEEEccCC--CCCCChHHHHHHHcCCCCCcceEEecCccch
Q 015082 86 IDELFAKTSVKPKDIGILIVNCSLF--NPTPSLSAMVINHYKLRGNIISYNLGGMGCS 141 (413)
Q Consensus 86 a~~aL~~ag~~~~~Id~li~~s~~~--~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~ 141 (413)
.++.+++.-.+|+|+--++++-++| ..+| |..+...-|.. +++.++++ +-|.
T Consensus 28 l~~i~~~N~~~pedv~sv~~svT~Dl~A~FP--Aka~R~~~gw~-~Vpv~~~Q-em~V 81 (125)
T COG4401 28 LEEIEEENITDPEDVVSVILSVTEDLDAIFP--AKAVRELPGWE-YVPVMCMQ-EMPV 81 (125)
T ss_pred HHHHHHhcCCChhheeeEEEEeccchhhhCc--HHHhccCCCCc-ccceeeee-eccC
Confidence 3444557788999999999887764 3344 45555666887 89999999 5664
No 285
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.
Probab=32.00 E-value=42 Score=32.56 Aligned_cols=85 Identities=14% Similarity=0.124 Sum_probs=43.1
Q ss_pred HHHHHHHHHhCCCCCCCcCeEEEEccCCCCCCChHHHHHHHcCCCCCcce------------EEec--Ccc--chhHHHH
Q 015082 83 FGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIIS------------YNLG--GMG--CSAGLIS 146 (413)
Q Consensus 83 ~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lGl~~~~~~------------~~v~--~~~--C~~~~~a 146 (413)
+..+.+=|++.|.+|+|-|+||.+--. .....+...+..+-|++-.... -|+. +.| |++.+ -
T Consensus 206 ~dTI~~h~~D~g~~p~dYDlIvTGDLg-~vG~~il~~Ll~~~G~~i~~~~~DCG~~iyd~~~Qdv~aGGSGcgCSA~V-~ 283 (329)
T PF07451_consen 206 ADTIEQHFKDTGRSPDDYDLIVTGDLG-KVGRKILRDLLKEKGYDISENYNDCGLMIYDPEKQDVHAGGSGCGCSAVV-L 283 (329)
T ss_dssp HHHHHHHHHHCT--GGG-SEEEESS-H-HHHHHHHHHHHHHTT---GGGEEEHHHCSS-TT-S--TT-EESHHHHHHH-H
T ss_pred HHHHHHHHHHhCCChhhcCeEEecchH-HHHHHHHHHHHHHcCCCCccccccCCeEeecCCccccccCCCCcchHHHH-H
Confidence 344456678999999999999987320 0012345566666666421111 1222 123 33222 2
Q ss_pred HHHHHHHHHcCCCCeEEEEEEcc
Q 015082 147 IDLANNLLQVHPNSYALVISMEN 169 (413)
Q Consensus 147 l~~A~~~i~~g~~~~vLVv~~e~ 169 (413)
.-.-...++.|..++||+|+.-.
T Consensus 284 ~g~ll~~l~~g~~krvL~vaTGA 306 (329)
T PF07451_consen 284 CGYLLPKLRKGELKRVLFVATGA 306 (329)
T ss_dssp HHCHHHHHHTTS-SEEEEEEEEE
T ss_pred HHHHHHHHHcCCceEEEEEEchh
Confidence 23334567789999999998764
No 286
>PLN02569 threonine synthase
Probab=30.60 E-value=74 Score=33.17 Aligned_cols=45 Identities=20% Similarity=0.153 Sum_probs=37.3
Q ss_pred CcchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhhhhhhhhccc
Q 015082 342 SSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVWKALRS 386 (413)
Q Consensus 342 ~sasi~i~L~~~~~~g~l~~Gd~vll~~~G~G~~~~a~llr~~~~ 386 (413)
++|..+..+.++.++|.++++++|+++.-|.|+-.....+.++..
T Consensus 407 ssAaalAal~kl~~~g~i~~~~~VV~i~Tg~GlK~~~~~~~~~~~ 451 (484)
T PLN02569 407 HTGVALAALKKLRASGVIGPTDRTVVVSTAHGLKFTQSKIDYHSK 451 (484)
T ss_pred hHHHHHHHHHHHHHcCCCCCCCcEEEEeCCCcccChhHHHHhccc
Confidence 556666777778888889999999999999999988888877763
No 287
>PRK00290 dnaK molecular chaperone DnaK; Provisional
Probab=30.07 E-value=1.5e+02 Score=32.03 Aligned_cols=65 Identities=11% Similarity=0.080 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCeEEEEccCCCCCCChHHHHHHHcCCCCCcceEEecCccchhHHHHHH
Q 015082 80 AVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISID 148 (413)
Q Consensus 80 ~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~~C~~~~~al~ 148 (413)
+=..+.++++|+++++++++||.|++..... .+|.+-..+.+.+|... ...++-.-|.+.-.|+.
T Consensus 307 ~~~~~~i~~~l~~a~~~~~~id~ViLvGGss-riP~v~~~l~~~fg~~~---~~~~npdeava~GAa~~ 371 (627)
T PRK00290 307 ERTIEPCKQALKDAGLSVSDIDEVILVGGST-RMPAVQELVKEFFGKEP---NKGVNPDEVVAIGAAIQ 371 (627)
T ss_pred HHHHHHHHHHHHHcCCChhhCcEEEEECCcC-CChHHHHHHHHHhCCCC---CcCcCChHHHHHhHHHH
Confidence 3345567899999999999999998763211 37888889998887642 22344334444444443
No 288
>PF12244 DUF3606: Protein of unknown function (DUF3606); InterPro: IPR022037 This family of proteins is found in bacteria. Proteins in this family are typically between 58 and 85 amino acids in length. There is a single completely conserved residue G that may be functionally important.
Probab=29.89 E-value=36 Score=24.24 Aligned_cols=29 Identities=14% Similarity=0.207 Sum_probs=24.6
Q ss_pred hHHHHHHHHhcCCCcccchhhHHHHhhhcCCC
Q 015082 311 RAVLDELEKNLQLSDWHMEPSRMTLYRFGNTS 342 (413)
Q Consensus 311 ~~~~~~i~~~lgi~~e~~~~s~~~l~~~Gn~~ 342 (413)
..-++.|+++||++++++ ..-+.++||..
T Consensus 20 ~~ev~ywa~~~gvt~~~L---~~AV~~vG~~~ 48 (57)
T PF12244_consen 20 PYEVRYWAKRFGVTEEQL---REAVRAVGNSR 48 (57)
T ss_pred HHHHHHHHHHHCcCHHHH---HHHHHHHCcCH
Confidence 456788999999999999 67888999973
No 289
>PRK13411 molecular chaperone DnaK; Provisional
Probab=29.37 E-value=1.3e+02 Score=32.56 Aligned_cols=52 Identities=13% Similarity=0.273 Sum_probs=38.2
Q ss_pred HHHHHHHHH---HHHHHHHHHHhCCCCCCCcCeEEEEc-cCCCCCCChHHHHHHHcCC
Q 015082 73 EARKEAEAV---MFGAIDELFAKTSVKPKDIGILIVNC-SLFNPTPSLSAMVINHYKL 126 (413)
Q Consensus 73 ~~~~~~~~l---a~~Aa~~aL~~ag~~~~~Id~li~~s-~~~~~~p~~a~~v~~~lGl 126 (413)
++++...++ ..+.++++|+++++++++||.|++.. +. .+|.+-..|.+.+|-
T Consensus 298 ~fe~l~~~l~~~~~~~i~~~L~~a~~~~~~id~ViLvGGss--riP~v~~~l~~~f~~ 353 (653)
T PRK13411 298 KFEELTKDLVEATIEPMQQALKDAGLKPEDIDRVILVGGST--RIPAVQEAIQKFFGG 353 (653)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCcEEEEECCCC--CcchHHHHHHHHcCC
Confidence 344444444 34567899999999999999998763 32 378888899988874
No 290
>PLN02932 3-ketoacyl-CoA synthase
Probab=28.08 E-value=1.6e+02 Score=30.66 Aligned_cols=66 Identities=8% Similarity=-0.015 Sum_probs=39.8
Q ss_pred cchhccccEEEecC----CChHHHHHHHHhcCCCcccchhhHHHHhhhcCCCcchHHHHHHH---HHHcCCCCCCCeEEE
Q 015082 295 PDFKLAFEHFCIHA----GGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAY---SEAKGRIKKGDRTWQ 367 (413)
Q Consensus 295 ~~~~~did~~i~hq----~~~~~~~~i~~~lgi~~e~~~~s~~~l~~~Gn~~sasi~i~L~~---~~~~g~l~~Gd~vll 367 (413)
+..++|||.+|... +.+.+--.+.++||++.+-.. + ..+-+|+++-+++|+- +++.+ ++.++|+
T Consensus 164 gi~p~dId~lIv~tst~~~~Pslaa~V~~~lGlr~~i~~--f----dL~gmGCSggl~aL~lA~~ll~~~---~~~~aLV 234 (478)
T PLN02932 164 GISPSDIGILVVNSSTFNPTPSLSSILVNKFKLRDNIKS--L----NLGGMGCSAGVIAIDAAKSLLQVH---RNTYALV 234 (478)
T ss_pred CCCHHHCCEEEEEccCCCCCCcHHHHHHHHhCCCCCceE--E----EeccchhhhHHHHHHHHHHHHHcC---CCCeEEE
Confidence 34578999997533 455667778999999754321 2 2444666666677654 34333 4555554
Q ss_pred Ee
Q 015082 368 IA 369 (413)
Q Consensus 368 ~~ 369 (413)
++
T Consensus 235 Vs 236 (478)
T PLN02932 235 VS 236 (478)
T ss_pred EE
Confidence 44
No 291
>TIGR02350 prok_dnaK chaperone protein DnaK. Members of this family are the chaperone DnaK, of the DnaK-DnaJ-GrpE chaperone system. All members of the seed alignment were taken from completely sequenced bacterial or archaeal genomes and (except for Mycoplasma sequence) found clustered with other genes of this systems. This model excludes DnaK homologs that are not DnaK itself, such as the heat shock cognate protein HscA (TIGR01991). However, it is not designed to distinguish among DnaK paralogs in eukaryotes. Note that a number of dnaK genes have shadow ORFs in the same reverse (relative to dnaK) reading frame, a few of which have been assigned glutamate dehydrogenase activity. The significance of this observation is unclear; lengths of such shadow ORFs are highly variable as if the presumptive protein product is not conserved.
Probab=28.07 E-value=1.3e+02 Score=32.07 Aligned_cols=47 Identities=11% Similarity=0.183 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCeEEEEccCCCCCCChHHHHHHHcCCC
Q 015082 80 AVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLR 127 (413)
Q Consensus 80 ~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lGl~ 127 (413)
+=..+.++++|+++|+++++||.|++....- .+|.+-..+.+.+|..
T Consensus 305 ~~~~~~i~~~l~~a~~~~~~i~~V~LvGGss-riP~v~~~i~~~f~~~ 351 (595)
T TIGR02350 305 ERTKEPVRQALKDAGLSASDIDEVILVGGST-RIPAVQELVKDFFGKE 351 (595)
T ss_pred HHHHHHHHHHHHHcCCCHhHCcEEEEECCcc-cChHHHHHHHHHhCCc
Confidence 3345567899999999999999998763211 3788888899888853
No 292
>PLN02192 3-ketoacyl-CoA synthase
Probab=28.06 E-value=1.6e+02 Score=30.87 Aligned_cols=77 Identities=6% Similarity=0.020 Sum_probs=43.1
Q ss_pred hhhccCCCccchhccccEEEec----CCChHHHHHHHHhcCCCcccchhhHHHHhhhcCCCcchHHHHHHHHHHcCCCCC
Q 015082 286 FKMKIKPYIPDFKLAFEHFCIH----AGGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKK 361 (413)
Q Consensus 286 ~~~al~~~~~~~~~did~~i~h----q~~~~~~~~i~~~lgi~~e~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~l~~ 361 (413)
.++++++ .+..++|||.+|.. ++.+..--.+.+++|+..+-. ++ ..+-+|+++-+++|+-+..-=+..+
T Consensus 184 a~~aL~k-aGi~p~DIDiLIv~~S~~~~~PSlaa~I~n~lGlr~~i~--af----dLsgmGCSggl~aLdlA~~lL~a~~ 256 (511)
T PLN02192 184 IDQLLAK-TSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIL--SY----NLGGMGCSAGLISIDLAKHLLQVHP 256 (511)
T ss_pred HHHHHHH-cCCCHHHCCEEEEECCCCCCCchHHHHHHHHhCCCCCce--EE----EcccchhhhHHHHHHHHHHHHHcCC
Confidence 3334433 34457999998854 334567777899999974322 02 2444555555666643322111245
Q ss_pred CCeEEEEe
Q 015082 362 GDRTWQIA 369 (413)
Q Consensus 362 Gd~vll~~ 369 (413)
+.++|+++
T Consensus 257 ~~~aLVVs 264 (511)
T PLN02192 257 NSYALVIS 264 (511)
T ss_pred CCeEEEEE
Confidence 67777665
No 293
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=27.64 E-value=90 Score=31.39 Aligned_cols=42 Identities=10% Similarity=0.097 Sum_probs=28.6
Q ss_pred HHHHHHHHHHhCCCC--CCCcCeEEEE-ccCCCCCCChHHHHHHHcCCCC
Q 015082 82 MFGAIDELFAKTSVK--PKDIGILIVN-CSLFNPTPSLSAMVINHYKLRG 128 (413)
Q Consensus 82 a~~Aa~~aL~~ag~~--~~~Id~li~~-s~~~~~~p~~a~~v~~~lGl~~ 128 (413)
...|+++|++++|++ ++|||.+=+. +. +.......+.||+.+
T Consensus 257 ~~~a~~~a~~~Agi~~p~~Did~~el~d~F-----~~~~~~~~e~lGl~~ 301 (386)
T PRK08313 257 GRDAAAALWKAAGITDPRDEIDVAEIYVPF-----SWFEPMWLENLGFAP 301 (386)
T ss_pred HHHHHHHHHHHcCCCCChhhCCEEEeccCC-----hHHHHHHHHHcCCCC
Confidence 457999999999997 6999977544 32 222334456677653
No 294
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=27.06 E-value=2e+02 Score=28.16 Aligned_cols=71 Identities=10% Similarity=0.054 Sum_probs=44.7
Q ss_pred HHHHhhhhccCCCccchhccccEEEecCC----ChHHHHHHHHhcCCCcccchhhHHHHhhhcCCCcchHHHHHHHHHH
Q 015082 281 VGKKLFKMKIKPYIPDFKLAFEHFCIHAG----GRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEA 355 (413)
Q Consensus 281 ~~~~v~~~al~~~~~~~~~did~~i~hq~----~~~~~~~i~~~lgi~~e~~~~s~~~l~~~Gn~~sasi~i~L~~~~~ 355 (413)
.+-++.+++++. .+..++|||.+++-.. -+.+.-.+..+||+++..- +.-+--.|..++++=+-.+.+..+
T Consensus 79 l~v~a~r~aL~~-~~l~pedId~vv~vtsTG~~~Ps~dari~~~Lgl~p~~~---Rvpv~glGCaaga~glara~~y~r 153 (356)
T COG3424 79 LGVDALRRALDG-SPLRPEDIDAVVTVTSTGLATPSLDARIVGELGLSPDTR---RVPVWGLGCAAGAAGLARARDYCR 153 (356)
T ss_pred HHHHHHHHHhcc-CCCCHHHCcEEEEEeeccccCCChhHHHHhhcCCCCccc---eeeeecchhhhhhhHHHHHHHHHh
Confidence 345566667765 4455799999986443 3455667899999998643 233334566666655555555554
No 295
>PF09887 DUF2114: Uncharacterized protein conserved in archaea (DUF2114); InterPro: IPR008303 There are currently no experimental data for members of this group or their homologues. The exact function of this protein is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=27.00 E-value=1.4e+02 Score=29.90 Aligned_cols=41 Identities=15% Similarity=0.207 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCC-CcCeEEEEcc--CCCCCC
Q 015082 74 ARKEAEAVMFGAIDELFAKTSVKPK-DIGILIVNCS--LFNPTP 114 (413)
Q Consensus 74 ~~~~~~~la~~Aa~~aL~~ag~~~~-~Id~li~~s~--~~~~~p 114 (413)
.+|...||......+++++++++.+ |+|+|+=++. ..+..|
T Consensus 63 TrEsV~elVrdtl~e~~k~A~l~i~~DL~FVVRSTGVvAgf~sp 106 (448)
T PF09887_consen 63 TRESVAELVRDTLLESHKKAHLDIKKDLDFVVRSTGVVAGFDSP 106 (448)
T ss_pred cHHHHHHHHHHHHHHHHHHcCCCccccceEEEeecceeeccCCH
Confidence 4677889999999999999999987 9999987653 344445
No 296
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=26.64 E-value=1e+02 Score=31.05 Aligned_cols=42 Identities=10% Similarity=0.197 Sum_probs=29.6
Q ss_pred HHHHHHHHHHhCCCC--CCCcCeEEEE-ccCCCCCCChHHHHHHHcCCCC
Q 015082 82 MFGAIDELFAKTSVK--PKDIGILIVN-CSLFNPTPSLSAMVINHYKLRG 128 (413)
Q Consensus 82 a~~Aa~~aL~~ag~~--~~~Id~li~~-s~~~~~~p~~a~~v~~~lGl~~ 128 (413)
...|++++++++|++ ++|||.+=+. +. ........+.||+.+
T Consensus 268 ~~~aa~~a~~~AGl~~~~~Did~~Ei~D~F-----s~~~l~~~e~lGl~~ 312 (398)
T PRK06157 268 TRIAARKAYREAGITDPREELSMAEVHDCF-----SITELVTMEDLGLSE 312 (398)
T ss_pred HHHHHHHHHHHcCCCCchhcCCEEEEecCC-----hHHHHHHHHHcCCCC
Confidence 457999999999998 7999987544 32 223445556778764
No 297
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=26.40 E-value=84 Score=28.82 Aligned_cols=37 Identities=24% Similarity=0.283 Sum_probs=25.1
Q ss_pred HHHHHHHHHcCCCCCCCeEEEEeeccchhhhhhhhhhc
Q 015082 347 WYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVWKAL 384 (413)
Q Consensus 347 ~i~L~~~~~~g~l~~Gd~vll~~~G~G~~~~a~llr~~ 384 (413)
|...+.+++.=.+++|++||=++-|+|+..+ ++=+..
T Consensus 58 P~~vA~m~~~L~~~~g~~VLEIGtGsGY~aA-vla~l~ 94 (209)
T COG2518 58 PHMVARMLQLLELKPGDRVLEIGTGSGYQAA-VLARLV 94 (209)
T ss_pred cHHHHHHHHHhCCCCCCeEEEECCCchHHHH-HHHHHh
Confidence 3444444444478999999999999998754 443333
No 298
>PLN00415 3-ketoacyl-CoA synthase
Probab=24.94 E-value=1.4e+02 Score=30.87 Aligned_cols=68 Identities=6% Similarity=-0.034 Sum_probs=39.1
Q ss_pred chhccccEEEecCC----ChHHHHHHHHhcCCCcccchhhHHHHhhhcCCCcchHHHHHHHHHHcCCCCCCCeEEEEe
Q 015082 296 DFKLAFEHFCIHAG----GRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIA 369 (413)
Q Consensus 296 ~~~~did~~i~hq~----~~~~~~~i~~~lgi~~e~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~l~~Gd~vll~~ 369 (413)
..++|||++|.+.. .+..--.+.+++|++++.. .+ ..+.+|+++-++.|..+.+==+..++.++|+++
T Consensus 151 i~p~dID~LIvs~T~~~~~Pslaa~l~~~LGLr~~v~-----~~-dL~gmGCsggv~aL~lA~~ll~a~~~~~aLVVs 222 (466)
T PLN00415 151 IEPREVGIFIVNCSLFNPNPSLSSMIVNRYKLKTDVK-----TY-NLSGMGCSAGAISVDLATNLLKANPNTYAVIVS 222 (466)
T ss_pred CCHHHCCEEEEECcCCCCCchHHHHHHHHhCCCCCce-----EE-EeccccchHHHHHHHHHHHHHHhCCCCEEEEEE
Confidence 34789999886432 3455567889999984432 12 244455555555554432211224677777655
No 299
>COG2377 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases [Posttranslational modification, protein turnover, chaperones]
Probab=24.25 E-value=1.6e+02 Score=29.33 Aligned_cols=59 Identities=14% Similarity=0.201 Sum_probs=42.8
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcCeEEEEccCCCCCC----------ChHHHHHHHcCCC
Q 015082 69 PSMKEARKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTP----------SLSAMVINHYKLR 127 (413)
Q Consensus 69 ~~ma~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p----------~~a~~v~~~lGl~ 127 (413)
..++..++.-..+-+.|++.+|++.++.+++|+.|.+...+...-| .....++++.|++
T Consensus 62 ~~~~~l~~~l~~~~a~av~~ll~~~~l~~~~i~~iG~HGQTV~H~p~~~~~~t~Qlgd~~~iA~~TGi~ 130 (371)
T COG2377 62 AELAELDRALALLHAQAVAALLAEQGLLPRDIRAIGCHGQTVLHRPPGHAPDTVQLGDGPLIAELTGIT 130 (371)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHhCceeecCCccccCCCCCCCCceeecCchHHHHHHhCCc
Confidence 3455566677788899999999999999999997766522211111 2467899999997
No 300
>PTZ00400 DnaK-type molecular chaperone; Provisional
Probab=23.81 E-value=1.4e+02 Score=32.47 Aligned_cols=54 Identities=11% Similarity=0.179 Sum_probs=39.7
Q ss_pred HHHHHHHHHHH---HHHHHHHHHhCCCCCCCcCeEEEEc-cCCCCCCChHHHHHHHcCCC
Q 015082 72 KEARKEAEAVM---FGAIDELFAKTSVKPKDIGILIVNC-SLFNPTPSLSAMVINHYKLR 127 (413)
Q Consensus 72 a~~~~~~~~la---~~Aa~~aL~~ag~~~~~Id~li~~s-~~~~~~p~~a~~v~~~lGl~ 127 (413)
.++++...++. ...++++|+++|+++++||.|++.. +. .+|.+-..|.+.+|..
T Consensus 337 ~efe~l~~~l~~~~~~~i~~~L~~a~~~~~~i~~ViLvGGss--riP~v~~~l~~~f~~~ 394 (663)
T PTZ00400 337 AKLEELTHDLLKKTIEPCEKCIKDAGVKKDELNDVILVGGMT--RMPKVSETVKKIFGKE 394 (663)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCcEEEEECCcc--CChHHHHHHHHHhCCC
Confidence 34555555444 4556899999999999999998763 32 3788888898888864
No 301
>KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=22.51 E-value=1.2e+02 Score=28.79 Aligned_cols=24 Identities=38% Similarity=0.513 Sum_probs=14.7
Q ss_pred HHHHHHHHHhCCCCCCCcCeEEEE
Q 015082 83 FGAIDELFAKTSVKPKDIGILIVN 106 (413)
Q Consensus 83 ~~Aa~~aL~~ag~~~~~Id~li~~ 106 (413)
+-|++.+|+++|+..+|||.+=+.
T Consensus 296 vPAI~~vLKksGlkl~DiDl~EvN 319 (396)
T KOG1391|consen 296 VPAISGVLKKSGLKLKDIDLVEVN 319 (396)
T ss_pred cHHHHHHHHHcCCcccccceEEec
Confidence 346666666666666666655444
No 302
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane
Probab=21.59 E-value=3e+02 Score=26.62 Aligned_cols=68 Identities=1% Similarity=-0.047 Sum_probs=42.6
Q ss_pred hhccccEEEec----CCChHHHHHHHHhcCCCcccchhhHHHHhhhcCCCcchHHHHHHHHHHcCCCCCCCeEEEEee
Q 015082 297 FKLAFEHFCIH----AGGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAF 370 (413)
Q Consensus 297 ~~~did~~i~h----q~~~~~~~~i~~~lgi~~e~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~l~~Gd~vll~~~ 370 (413)
.++|||.+|.+ .+.+.+-..+.+++|+..+-. ..+ .+=+|.++-+++++-+.+==+..||..+++++.
T Consensus 101 ~p~dIdiLVvncs~f~ptPSLsamIvnr~~mr~di~---~~n---LsGMGCsAgliai~lA~~lL~~~p~~~ALVVst 172 (290)
T PF08392_consen 101 KPSDIDILVVNCSLFNPTPSLSAMIVNRYGMRSDIK---SYN---LSGMGCSAGLIAIDLAKDLLQAHPNSYALVVST 172 (290)
T ss_pred CHHHCCEEEEECcCCCcCCcHHHHHHHHhCCCcCee---eec---ccCCcchhhHHHHHHHHHHHHhCCCcEEEEEEE
Confidence 47899988854 356688889999999987643 123 344444444444443222113467888888774
No 303
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=20.53 E-value=1.6e+02 Score=37.32 Aligned_cols=75 Identities=12% Similarity=0.139 Sum_probs=46.0
Q ss_pred HHHHHHHHHhCCCCCCCcCeEEEE-ccCCCCCCChHHHHHHHcCCCC----Ccce----EEecCccchhHHHHHHHHHHH
Q 015082 83 FGAIDELFAKTSVKPKDIGILIVN-CSLFNPTPSLSAMVINHYKLRG----NIIS----YNLGGMGCSAGLISIDLANNL 153 (413)
Q Consensus 83 ~~Aa~~aL~~ag~~~~~Id~li~~-s~~~~~~p~~a~~v~~~lGl~~----~~~~----~~v~~~~C~~~~~al~~A~~~ 153 (413)
.++.+++|+++|+++++||.|-.. |.+...-+.-..-+.+-+|-.. .++. -.+.+..+++|+.+|.-+.-.
T Consensus 318 ~~~i~~Al~~Agi~p~~I~yIeaHGTGT~~gD~~E~~Al~~vf~~~~~~~~~~~vgSvKs~iGH~~~AAG~a~lik~~la 397 (2582)
T TIGR02813 318 AKALKRAYDDAGFAPHTCGLIEAHGTGTAAGDVAEFGGLVSVFSQDNDQKQHIALGSVKSQIGHTKSTAGTAGMIKAVLA 397 (2582)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEecCCCCCCCCHHHHHHHHHHhcccccCCCCceeeccccccccchHhHHHHHHHHHHHH
Confidence 689999999999999999988654 5332222333344444444210 1111 123445567777777777766
Q ss_pred HHcC
Q 015082 154 LQVH 157 (413)
Q Consensus 154 i~~g 157 (413)
++.+
T Consensus 398 l~~~ 401 (2582)
T TIGR02813 398 LHHK 401 (2582)
T ss_pred HhcC
Confidence 7665
No 304
>PF11392 DUF2877: Protein of unknown function (DUF2877); InterPro: IPR021530 This bacterial family of proteins are putative carboxylase proteins however this cannot be confirmed.
Probab=20.28 E-value=1.4e+02 Score=24.24 Aligned_cols=46 Identities=15% Similarity=0.063 Sum_probs=28.5
Q ss_pred CChHHHHHHHHhcCCCcccchhhHHHHhhhcCCCcchHHHHHHHHH
Q 015082 309 GGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSE 354 (413)
Q Consensus 309 ~~~~~~~~i~~~lgi~~e~~~~s~~~l~~~Gn~~sasi~i~L~~~~ 354 (413)
.+..+.+.+..-.+-+.+.+..+...+-++||++.++.+.-+...+
T Consensus 64 ~~~~~~~l~~~l~~~~~~~~~~~i~~ll~iGhTSG~D~L~Gi~~~l 109 (110)
T PF11392_consen 64 FSEPLLRLLHALSSGDSEDLEEAIRRLLAIGHTSGADTLLGILLGL 109 (110)
T ss_pred chHHHHHHHHHHHcCCchHHHHHHHHHHHcCCCchHHHHHHHHHHh
Confidence 3444444433333333344444567788899999999998887654
No 305
>PF03702 UPF0075: Uncharacterised protein family (UPF0075); InterPro: IPR005338 Anhydro-N-acetylmuramic acid kinase catalyzes the specific phosphorylation of 1,6-anhydro-N-acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. It is also required for the utilisation of anhMurNAc, either imported from the medium, or derived from its own cell wall murein, and in so doing plays a role in cell wall recycling [, ]. ; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0006040 amino sugar metabolic process, 0009254 peptidoglycan turnover; PDB: 3QBX_B 3QBW_A 3CQY_B.
Probab=20.08 E-value=1.1e+02 Score=30.71 Aligned_cols=55 Identities=16% Similarity=0.306 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCCcCeEEEE-cc----CCCCCC-----ChHHHHHHHcCCC
Q 015082 73 EARKEAEAVMFGAIDELFAKTSVKPKDIGILIVN-CS----LFNPTP-----SLSAMVINHYKLR 127 (413)
Q Consensus 73 ~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~-s~----~~~~~p-----~~a~~v~~~lGl~ 127 (413)
.....-.++-++|+++.|+++++++++||.|=.. .| |....+ .....|++++|++
T Consensus 61 ~l~~~lg~~~a~av~~~l~~~~i~~~~I~~IgsHGQTv~H~P~~~~~~TlQiG~~~~iA~~tgi~ 125 (364)
T PF03702_consen 61 ELDRELGELFADAVNQFLKKNGISPSDIDLIGSHGQTVFHRPEGQHPFTLQIGDPAVIAERTGIT 125 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCT--GGGEEEEEE--EEEEEECCCTTTEEEEES-HHHHHHHHSS-
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcccccEEEeCCcceecCcCCCCCceEecCCHHHHHHHHCcC
Confidence 3344566778999999999999999999988654 33 321112 2478889999986
Done!