Query 015084
Match_columns 413
No_of_seqs 393 out of 2545
Neff 6.1
Searched_HMMs 29240
Date Mon Mar 25 06:23:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015084.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015084hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1mzk_A Kinase associated prote 99.9 1.2E-24 4.2E-29 191.6 15.1 135 175-309 5-139 (139)
2 4h87_A Kanadaptin; FHA domain 99.9 3.4E-22 1.2E-26 174.4 12.9 110 167-288 10-128 (130)
3 3gqs_A Adenylate cyclase-like 99.8 7.4E-21 2.5E-25 159.7 12.8 100 176-290 3-103 (106)
4 1uht_A Expressed protein; FHA 99.8 1.3E-20 4.4E-25 161.1 11.3 105 174-292 9-114 (118)
5 3va4_A Mediator of DNA damage 99.8 1.7E-20 5.9E-25 164.0 12.3 104 175-291 22-128 (132)
6 2xt9_B Putative signal transdu 99.8 1.4E-19 4.7E-24 154.2 13.6 97 175-289 9-105 (115)
7 2jpe_A Nuclear inhibitor of pr 99.8 1.5E-20 5E-25 165.6 6.2 110 167-288 24-134 (140)
8 2kb3_A Oxoglutarate dehydrogen 99.8 2.5E-19 8.5E-24 158.7 13.6 96 175-288 44-139 (143)
9 3po8_A RV0020C protein, putati 99.8 2E-19 6.8E-24 149.4 11.7 93 176-288 4-96 (100)
10 1r21_A Antigen KI-67; beta san 99.8 1.9E-19 6.5E-24 156.0 10.5 104 171-291 6-110 (128)
11 2kfu_A RV1827 PThr 22; FHA dom 99.8 6E-19 2.1E-23 159.4 13.3 96 176-289 54-149 (162)
12 3hx1_A SLR1951 protein; P74513 99.8 1.3E-18 4.5E-23 151.8 11.4 101 176-292 9-117 (131)
13 3oun_A Putative uncharacterize 99.7 3.4E-18 1.2E-22 153.6 10.4 91 176-286 66-156 (157)
14 1lgp_A Cell cycle checkpoint p 99.7 3.8E-18 1.3E-22 145.2 9.6 93 176-282 3-96 (116)
15 3els_A PRE-mRNA leakage protei 99.7 5.7E-18 2E-22 152.4 10.9 96 175-282 29-145 (158)
16 1dmz_A Protein (protein kinase 99.7 4.3E-18 1.5E-22 153.0 8.9 101 176-288 4-122 (158)
17 1qu5_A Protein kinase SPK1; FH 99.7 3.7E-18 1.3E-22 156.9 8.0 103 174-288 26-146 (182)
18 1g3g_A Protien kinase SPK1; FH 99.7 9.2E-18 3.1E-22 151.7 10.2 97 176-282 32-135 (164)
19 3elv_A PRE-mRNA leakage protei 99.7 2.8E-17 9.6E-22 153.2 11.6 96 176-283 77-193 (205)
20 2jqj_A DNA damage response pro 99.7 8.2E-17 2.8E-21 143.4 13.6 99 175-288 16-121 (151)
21 2pie_A E3 ubiquitin-protein li 99.7 1E-16 3.5E-21 140.7 13.9 85 183-281 14-102 (138)
22 1gxc_A CHK2, CDS1, serine/thre 99.7 9.2E-17 3.1E-21 142.9 12.2 92 176-283 29-132 (149)
23 2csw_A Ubiquitin ligase protei 99.7 5.3E-17 1.8E-21 143.8 9.8 91 177-282 17-111 (145)
24 1wln_A Afadin; beta sandwich, 99.7 1.2E-16 4.3E-21 136.9 11.5 95 177-288 11-113 (120)
25 1g6g_A Protein kinase RAD53; b 99.7 1.5E-16 5E-21 137.8 11.4 97 177-283 5-108 (127)
26 2ff4_A Probable regulatory pro 99.6 2E-15 6.8E-20 153.0 11.7 86 188-290 297-382 (388)
27 4ejq_A Kinesin-like protein KI 99.5 4.7E-14 1.6E-18 126.2 11.0 92 177-283 38-137 (154)
28 3fm8_A Kinesin-like protein KI 99.5 6.8E-14 2.3E-18 121.0 10.7 90 177-284 26-118 (124)
29 4a0e_A YSCD, type III secretio 99.5 1.4E-13 4.7E-18 118.4 9.3 97 176-291 3-100 (123)
30 2isn_A NYSGXRC-8828Z, phosphat 99.4 5.3E-14 1.8E-18 141.7 5.9 86 313-410 21-111 (364)
31 3qn1_B Protein phosphatase 2C 99.4 1.2E-13 4E-18 137.4 6.4 98 313-410 22-161 (337)
32 3kdj_B Protein phosphatase 2C 99.4 3.5E-13 1.2E-17 132.5 9.6 98 313-410 17-132 (316)
33 3huf_A DNA repair and telomere 99.4 1E-12 3.6E-17 129.0 9.1 96 177-286 1-109 (325)
34 4da1_A Protein phosphatase 1K, 99.4 7.8E-13 2.7E-17 134.1 8.3 125 267-410 86-225 (389)
35 2i0o_A Ser/Thr phosphatase; be 99.3 1.1E-12 3.7E-17 128.3 7.8 88 313-410 31-140 (304)
36 2irm_A Mitogen-activated prote 99.3 8.7E-13 3E-17 132.2 6.3 70 318-396 36-106 (358)
37 2pnq_A [pyruvate dehydrogenase 99.3 1.4E-12 4.9E-17 135.5 6.7 98 312-411 45-210 (467)
38 2p8e_A PPM1B beta isoform vari 99.3 1.6E-12 5.3E-17 127.4 6.0 98 313-410 32-142 (307)
39 3d8k_A PP2C, protein phosphata 99.3 1.4E-12 4.9E-17 131.9 5.9 86 313-410 21-113 (377)
40 2i44_A Serine-threonine phosph 99.3 2.8E-12 9.7E-17 126.0 7.5 97 313-409 30-145 (324)
41 2j4o_A Mitogen-activated prote 99.3 1.8E-12 6E-17 132.1 4.8 72 316-396 46-118 (401)
42 2iq1_A Protein phosphatase 2C 99.3 9.8E-12 3.4E-16 119.6 9.0 86 313-410 16-111 (274)
43 1a6q_A Phosphatase 2C; catalyt 99.3 2.9E-12 9.9E-17 129.8 5.4 97 313-410 30-135 (382)
44 3kt9_A Aprataxin; FHA domain, 99.2 1.6E-10 5.6E-15 96.5 11.7 94 177-287 4-97 (102)
45 3uv0_A Mutator 2, isoform B; F 99.2 4.1E-11 1.4E-15 99.1 8.0 77 191-286 14-97 (102)
46 3i6u_A CDS1, serine/threonine- 99.1 9.2E-11 3.2E-15 118.7 9.0 94 176-285 9-114 (419)
47 2brf_A Bifunctional polynucleo 99.1 6.4E-10 2.2E-14 94.0 9.9 90 175-282 7-98 (110)
48 1txo_A Putative bacterial enzy 99.0 2.2E-10 7.4E-15 107.0 7.0 83 313-410 13-104 (237)
49 2pk0_A Serine/threonine protei 99.0 7.5E-10 2.6E-14 104.1 7.9 90 313-410 14-112 (250)
50 2j82_A TPPHA, protein serine-t 98.9 2E-09 6.9E-14 100.4 8.7 89 313-410 9-106 (240)
51 1yj5_C 5' polynucleotide kinas 98.9 5.3E-09 1.8E-13 91.7 8.6 95 175-287 7-105 (143)
52 1ujx_A Polynucleotide kinase 3 98.8 2.6E-09 9E-14 91.3 5.1 87 175-279 14-102 (119)
53 4egx_A Kinesin-like protein KI 98.8 2.2E-08 7.7E-13 91.9 11.3 92 177-284 68-168 (184)
54 2jfr_A Ser-Thr phosphatase MSP 98.7 1.3E-08 4.5E-13 94.6 6.9 73 316-410 18-98 (234)
55 1wv3_A Similar to DNA segregat 98.7 2.1E-08 7E-13 95.5 7.1 74 203-290 93-170 (238)
56 3rnr_A Stage II sporulation E 98.1 4.6E-06 1.6E-10 76.9 7.9 69 333-410 8-80 (211)
57 3t91_A Stage II sporulation pr 75.8 3.3 0.00011 37.7 5.3 76 319-410 23-101 (242)
58 3pu9_A Protein serine/threonin 57.7 58 0.002 29.5 9.9 44 319-365 26-69 (242)
59 3f79_A Probable two-component 43.8 74 0.0025 28.7 8.2 70 335-409 64-135 (255)
60 2k9y_A Ephrin type-A receptor 40.9 23 0.00078 23.6 3.1 9 20-28 30-38 (41)
61 1p9k_A ORF, hypothetical prote 37.1 23 0.00079 26.8 3.0 32 246-286 46-77 (79)
62 2l6w_A Beta-type platelet-deri 38.0 9.8 0.00034 25.8 0.0 21 9-29 16-36 (39)
63 2l8s_A Integrin alpha-1; trans 28.4 64 0.0022 23.3 3.8 14 14-27 20-33 (54)
64 2cu3_A Unknown function protei 27.2 34 0.0012 24.8 2.3 26 248-279 32-57 (64)
65 2k1k_A Ephrin type-A receptor 27.1 57 0.002 21.7 3.2 13 16-28 24-36 (38)
66 1wv3_A Similar to DNA segregat 27.1 1E+02 0.0036 28.3 6.2 41 191-239 14-54 (238)
67 1nkz_B Light-harvesting protei 22.5 88 0.003 21.4 3.4 21 10-30 19-39 (41)
68 2rdd_B UPF0092 membrane protei 21.8 49 0.0017 21.7 2.0 11 20-30 14-24 (37)
69 1tyg_B YJBS; alpha beta barrel 21.3 52 0.0018 25.8 2.5 26 248-279 55-80 (87)
70 3ega_A Pellino-2, protein pell 21.1 4E+02 0.014 25.1 8.8 29 204-232 90-135 (263)
71 1lgh_B LH II, B800/850, light 20.5 1E+02 0.0034 21.5 3.4 22 9-30 23-44 (45)
72 3hvz_A Uncharacterized protein 20.4 52 0.0018 25.2 2.3 25 247-281 43-67 (78)
73 2jwa_A Receptor tyrosine-prote 20.0 60 0.002 22.5 2.2 14 14-27 21-34 (44)
No 1
>1mzk_A Kinase associated protein phosphatase; beta sandwich, hydrolase; NMR {Arabidopsis thaliana} SCOP: b.26.1.2
Probab=99.92 E-value=1.2e-24 Score=191.60 Aligned_cols=135 Identities=65% Similarity=1.051 Sum_probs=106.9
Q ss_pred CceEEEEEEeCCCCCeEEEeccCCCCCCcEEeCCCCCCCeEeCCcccccceeEEEEeCCcceEEEEEcCCCCceeeCCee
Q 015084 175 RSCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQP 254 (413)
Q Consensus 175 ~~~~~L~vi~G~~~g~~~~L~~~~~~~~~~~IGR~~~~divl~d~~VSr~HA~I~~~~~~~~~~L~DlgStNGT~VNg~~ 254 (413)
...+.|+++.|+..|..+.|..+...+.+++|||.+.|||+|+|+.|||+||+|.++.+++.|+|+|++|+|||||||++
T Consensus 5 ~~~~~L~v~~G~~~g~~~~l~~~~~~~~~~~IGR~~~~di~l~d~~VSr~Ha~i~~~~~~~~~~l~DlgS~NGT~vNg~~ 84 (139)
T 1mzk_A 5 SSWLFLEVIAGPAIGLQHAVNSTSSSKLPVKLGRVSPSDLALKDSEVSGKHAQITWNSTKFKWELVDMGSLNGTLVNSHS 84 (139)
T ss_dssp SEEEEEEECSSTTCSCEEEECTTCSTTCSEEEESSSSCSEECCCTTSSSEEEEEEEETTTTEEEEEETTCSSCCEETTEE
T ss_pred CCeEEEEEEeCCCCCeEEEecCCCCccceEEeeCCCCCCEEeCCCCCChHHcEEEEECCCCEEEEEECCCCCCEEECCEE
Confidence 35799999999999999999986433346999999999999999999999999999987458999999999999999999
Q ss_pred cCCCCCCCCCCCCceecCCCCEEEEcceeEEEEeeecccccccCCccccccCchh
Q 015084 255 INHPDSGSRHWGKPMELTSGDIITLGTTSSIHVQITSETVSQIPFGVGVASDPMA 309 (413)
Q Consensus 255 i~~~~~~~r~~g~~~~L~~GD~I~lG~~~~~~~~~~~~~~~~~~~~v~~~~d~~~ 309 (413)
+..|+.+.+.+++++.|++||+|+||.+.+.|+....++..++|+++++++|+|+
T Consensus 85 i~~~~~~~~~~~~~~~L~~GD~I~iG~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 139 (139)
T 1mzk_A 85 ISHPDLGSRKWGNPVELASDDIITLGTTTKVYVRISSQNEFQIPFKIGVASDPMA 139 (139)
T ss_dssp SSCCCTTTCCCCCCEECCTTEEEECSSSCEEEEEEEECCC---------------
T ss_pred CcCcccccccCCceEECCCCCEEEECCEEEEEEEcCCCccccCCCCcccccccCC
Confidence 9976556666678899999999999999999999988887789999999999874
No 2
>4h87_A Kanadaptin; FHA domain of PF00498, mRNA processing, nucleus, structural joint center for structural genomics, JCSG, protein structu initiative; HET: SO4; 1.55A {Homo sapiens}
Probab=99.88 E-value=3.4e-22 Score=174.41 Aligned_cols=110 Identities=25% Similarity=0.326 Sum_probs=91.5
Q ss_pred CCccccCCCceEEEEEEeCCCCCeEEEeccCCCCCCcEEeCCCCCCCeEeCCcccccceeEEEEe---------CCcceE
Q 015084 167 LPKAIADQRSCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWN---------PNKLKW 237 (413)
Q Consensus 167 ~p~~~~~~~~~~~L~vi~G~~~g~~~~L~~~~~~~~~~~IGR~~~~divl~d~~VSr~HA~I~~~---------~~~~~~ 237 (413)
.|.++......+.|+|++|+.....+.|.... .++|||.+.|||+|+|+.|||+||.|.++ ..++.|
T Consensus 10 ~P~wa~~p~~~~~L~v~k~g~~~~~~~L~~~~----~~~IGR~~~~di~l~~~~VSr~HA~I~~r~~~~~~~~~~~~~~~ 85 (130)
T 4h87_A 10 EPPWGGPATAPYSLETLKGGTILGTRSLKGTS----YCLFGRLSGCDVCLEHPSVSRYHAVLQHRASGPDGECDSNGPGF 85 (130)
T ss_dssp CCTTBCCCCSCCEEEEEETTEEEEEEECTTCS----EEEEESSTTSSEECCCTTSCSSCEEEEEBCCCCCC------CCE
T ss_pred CCCCccCCCCCEEEEEEECCeeeeeEEeCCCc----eEEEcCCcCCCEEeCCCCcchhcEEEEEecccCccceeccCCcc
Confidence 34445445567899999998877888887653 48999999999999999999999999763 223579
Q ss_pred EEEEcCCCCceeeCCeecCCCCCCCCCCCCceecCCCCEEEEcceeEEEEe
Q 015084 238 ELVDMGSLNGTLLNSQPINHPDSGSRHWGKPMELTSGDIITLGTTSSIHVQ 288 (413)
Q Consensus 238 ~L~DlgStNGT~VNg~~i~~~~~~~r~~g~~~~L~~GD~I~lG~~~~~~~~ 288 (413)
+|+|++|+|||||||++|.. +.+++|++||+|+||.+++.|+.
T Consensus 86 ~l~Dl~StNGT~vNg~ri~~--------~~~~~L~~GD~I~~G~str~yvl 128 (130)
T 4h87_A 86 YLYDLGSTHGTFLNKTRIPP--------RTYCRVHVGHVVRFGGSTRLFIL 128 (130)
T ss_dssp EEEECSCSSCEEETTEECCT--------TCCEECCTTCEEEETTCSEEEEE
T ss_pred eEeeCCCCCceEECCEECCC--------CceeECCCCCEEEECCceEEEEE
Confidence 99999999999999999986 56799999999999998877754
No 3
>3gqs_A Adenylate cyclase-like protein; FHA domain, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.20A {Chlamydia trachomatis}
Probab=99.85 E-value=7.4e-21 Score=159.74 Aligned_cols=100 Identities=27% Similarity=0.424 Sum_probs=89.6
Q ss_pred ceEEEEEEeCCCCCeEEEeccCCCCCCcEEeCCCC-CCCeEeCCcccccceeEEEEeCCcceEEEEEcCCCCceeeCCee
Q 015084 176 SCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVS-PSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQP 254 (413)
Q Consensus 176 ~~~~L~vi~G~~~g~~~~L~~~~~~~~~~~IGR~~-~~divl~d~~VSr~HA~I~~~~~~~~~~L~DlgStNGT~VNg~~ 254 (413)
..+.|+++.|+..|..+.|..+. +++|||.+ .||++|+|+.||++||+|.++.+ +.|+|+|++|+|||||||++
T Consensus 3 ~~~~L~v~~G~~~g~~~~l~~~~----~~~iGR~~~~~di~l~d~~vSr~Ha~i~~~~~-~~~~l~Dl~S~nGt~vng~~ 77 (106)
T 3gqs_A 3 SRFLLKVLAGANIGAEFHLDSGK----TYIVGSDPQVADIVLSDMSISRQHAKIIIGND-NSVLIEDLGSKNGVIVEGRK 77 (106)
T ss_dssp CEEEEEECC-CCTTCEEEECTTC----EEEEESCTTTCSEECCCTTSCSSCEEEEECTT-SCEEEEECSCSSCCEETTEE
T ss_pred ceEEEEEEeCCCCcEEEEECCCC----EEEEeECCCcCCEEeCCCCcchhhcEEEECCC-CcEEEEECcCCCCeEECCEE
Confidence 46899999999999999999874 48999999 79999999999999999999854 47999999999999999999
Q ss_pred cCCCCCCCCCCCCceecCCCCEEEEcceeEEEEeee
Q 015084 255 INHPDSGSRHWGKPMELTSGDIITLGTTSSIHVQIT 290 (413)
Q Consensus 255 i~~~~~~~r~~g~~~~L~~GD~I~lG~~~~~~~~~~ 290 (413)
+.. ++.|++||+|+||.+.+.|....
T Consensus 78 i~~----------~~~L~~Gd~i~~G~~~~~~~~~~ 103 (106)
T 3gqs_A 78 IEH----------QSTLSANQVVALGTTLFLLVDYA 103 (106)
T ss_dssp CSS----------EEECCTTCCEEETTEEEEEEEEC
T ss_pred CCC----------CeECCCCCEEEECCEEEEEEccC
Confidence 985 47999999999999999988643
No 4
>1uht_A Expressed protein; FHA domain, beta-sandwich, antiparallel beta-sheets, phosphopeptide binding motif, structural genomics; NMR {Arabidopsis thaliana} SCOP: b.26.1.2
Probab=99.83 E-value=1.3e-20 Score=161.09 Aligned_cols=105 Identities=33% Similarity=0.571 Sum_probs=94.7
Q ss_pred CCceEEEEEEeCCCCCeEEEeccCCCCCCcEEeCCC-CCCCeEeCCcccccceeEEEEeCCcceEEEEEcCCCCceeeCC
Q 015084 174 QRSCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRV-SPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNS 252 (413)
Q Consensus 174 ~~~~~~L~vi~G~~~g~~~~L~~~~~~~~~~~IGR~-~~~divl~d~~VSr~HA~I~~~~~~~~~~L~DlgStNGT~VNg 252 (413)
..+.+.|.+++|+..+..+.|..+. +++|||. +.|||+|+|+.||++||+|.++.+ .|+|+|++|+|||||||
T Consensus 9 ~~p~l~L~v~~g~~~g~~~~l~~~~----~~~iGR~~~~~di~l~d~~vSr~Ha~i~~~~~--~~~l~Dl~S~nGT~vng 82 (118)
T 1uht_A 9 VTPSLRLVFVKGPREGDALDYKPGS----TIRVGRIVRGNEIAIKDAGISTKHLRIESDSG--NWVIQDLGSSNGTLLNS 82 (118)
T ss_dssp CSCEEEEEESSSTTTTCBCCBCTTC----CEEEESSSTTCSEECCSSSSCTTCEEEEECSS--SEEEECCCCSSCCEESS
T ss_pred CCCeEEEEEEeCCCCCcEEEECCCC----EEEEcCCCCCCCEEeCCCCCchHHeEEEEECC--EEEEEECCCCCCeEECC
Confidence 3468999999999999999998753 5899999 799999999999999999999875 79999999999999999
Q ss_pred eecCCCCCCCCCCCCceecCCCCEEEEcceeEEEEeeecc
Q 015084 253 QPINHPDSGSRHWGKPMELTSGDIITLGTTSSIHVQITSE 292 (413)
Q Consensus 253 ~~i~~~~~~~r~~g~~~~L~~GD~I~lG~~~~~~~~~~~~ 292 (413)
+++.+ ++++.|++||+|+||.+.+.++.+...
T Consensus 83 ~~l~~--------~~~~~L~~gd~i~lG~~~~~~~~~~~~ 114 (118)
T 1uht_A 83 NALDP--------ETSVNLGDGDVIKLGEYTSILVNFVSG 114 (118)
T ss_dssp SBCCT--------TCEEECCTTEEEEETTTEEEEEEEECS
T ss_pred EECCC--------CCeEEcCCCCEEEECCeEEEEEEEecC
Confidence 99986 567999999999999999999887654
No 5
>3va4_A Mediator of DNA damage checkpoint protein 1; cell cycle, FHA domain, DNA-damage, CHK2 and MDC1 dimerizati; HET: TPO; 1.54A {Mus musculus} PDB: 3va1_A* 3umz_A 3unm_A 3unn_A* 3uot_A* 3un0_B
Probab=99.83 E-value=1.7e-20 Score=164.04 Aligned_cols=104 Identities=22% Similarity=0.226 Sum_probs=92.3
Q ss_pred CceEEEEEEeCCC-CCeEEEeccCCCCCCcEEeCCCCCCCeEeCCcccccceeEEEEeCCcceEEEEEcCCCCceeeCCe
Q 015084 175 RSCLSLEVVSGPS-RGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQ 253 (413)
Q Consensus 175 ~~~~~L~vi~G~~-~g~~~~L~~~~~~~~~~~IGR~~~~divl~d~~VSr~HA~I~~~~~~~~~~L~DlgStNGT~VNg~ 253 (413)
+....|++++|+. .++.+.|..+ .++|||.+.|||+|+|+.|||+||+|.++..++.|+|+|++|+|||||||+
T Consensus 22 ~p~g~L~v~~g~~~~g~~~~L~~~-----~~~IGR~~~~di~l~d~~VSr~HA~i~~~~~~~~~~l~Dl~S~NGT~vNg~ 96 (132)
T 3va4_A 22 EPIGQLRLFSGTHGPERDFPLYLG-----KNVVGRSPDCSVALPFPSISKQHAVIEISAWNKAPILQDCGSLNGTQIVKP 96 (132)
T ss_dssp CCSEEEEECCBTTBSCEEEEECSE-----EEEEESSTTSSEECCCTTSCTTCEEEEECSTTSCCEEEECSCSSCEEETTT
T ss_pred CCcEEEEEEeCCCCCceEEEECCC-----CEEEccCCCCCEEeCCCCcChhHEEEEEEcCCCEEEEEECCCCCCeEECCE
Confidence 3568999999998 9999999987 589999999999999999999999999985335899999999999999999
Q ss_pred ec--CCCCCCCCCCCCceecCCCCEEEEcceeEEEEeeec
Q 015084 254 PI--NHPDSGSRHWGKPMELTSGDIITLGTTSSIHVQITS 291 (413)
Q Consensus 254 ~i--~~~~~~~r~~g~~~~L~~GD~I~lG~~~~~~~~~~~ 291 (413)
++ .+ ++++.|++||+|+||.+.+.|.....
T Consensus 97 ~i~l~~--------~~~~~L~~GD~I~lG~~~l~f~~~~~ 128 (132)
T 3va4_A 97 PRVLPP--------GVSHRLRDQELILFADFPCQYHRLDV 128 (132)
T ss_dssp TEEECT--------TCCEECCTTCEEEETTEEEEEEECCC
T ss_pred EcccCC--------CCEEECCCCCEEEECCEEEEEEECCC
Confidence 84 43 46799999999999999999987544
No 6
>2xt9_B Putative signal transduction protein GARA; lyase-signaling protein complex, KDH, KGD; HET: TPP; 2.20A {Mycobacterium smegmatis}
Probab=99.82 E-value=1.4e-19 Score=154.17 Aligned_cols=97 Identities=31% Similarity=0.515 Sum_probs=88.6
Q ss_pred CceEEEEEEeCCCCCeEEEeccCCCCCCcEEeCCCCCCCeEeCCcccccceeEEEEeCCcceEEEEEcCCCCceeeCCee
Q 015084 175 RSCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQP 254 (413)
Q Consensus 175 ~~~~~L~vi~G~~~g~~~~L~~~~~~~~~~~IGR~~~~divl~d~~VSr~HA~I~~~~~~~~~~L~DlgStNGT~VNg~~ 254 (413)
+..+.|+++.|+..+..+.|..+ +++|||.+.|||+|+|+.||++||+|.++.+ .|+|+|++|+|||||||++
T Consensus 9 ~~~~~L~v~~g~~~g~~~~l~~~-----~~~IGR~~~~di~l~d~~vSr~Ha~i~~~~~--~~~l~Dl~S~nGt~vng~~ 81 (115)
T 2xt9_B 9 SGSALLVVKRGPNAGSRFLLDQP-----TTSAGRHPDSDIFLDDVTVSRRHAEFRLEGG--EFQVVDVGSLNGTYVNREP 81 (115)
T ss_dssp CSCEEEEEEESTTTTCEEEECSS-----EEEEESSTTSSEECCSTTSCSSCEEEEEETT--EEEEEECSCSSCEEETTEE
T ss_pred CCcEEEEEEeCCCCCeEEEECCC-----CEEECCCCCCCEEeCCcccChhheEEEEECC--EEEEEECCCCCCeEECCEE
Confidence 45789999999999999999876 5899999999999999999999999999865 7999999999999999999
Q ss_pred cCCCCCCCCCCCCceecCCCCEEEEcceeEEEEee
Q 015084 255 INHPDSGSRHWGKPMELTSGDIITLGTTSSIHVQI 289 (413)
Q Consensus 255 i~~~~~~~r~~g~~~~L~~GD~I~lG~~~~~~~~~ 289 (413)
+.. +.|++||+|+||.+.+.|...
T Consensus 82 i~~-----------~~L~~gd~i~iG~~~l~~~~~ 105 (115)
T 2xt9_B 82 VDS-----------AVLANGDEVQIGKFRLVFLTG 105 (115)
T ss_dssp CSE-----------EEECTTCEEEETTEEEEEEC-
T ss_pred cce-----------EECCCCCEEEECCEEEEEEeC
Confidence 985 899999999999998887653
No 7
>2jpe_A Nuclear inhibitor of protein phosphatase 1; FHA domain, NIPP1, mRNA splicing, transcription; NMR {Mus musculus}
Probab=99.81 E-value=1.5e-20 Score=165.59 Aligned_cols=110 Identities=19% Similarity=0.283 Sum_probs=94.0
Q ss_pred CCccccCCCceEEEEEEeCCCCCeEEEeccCCCCCCcEEeCCCCC-CCeEeCCcccccceeEEEEeCCcceEEEEEcCCC
Q 015084 167 LPKAIADQRSCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSP-SDVLLKDSEVSGKHALINWNPNKLKWELVDMGSL 245 (413)
Q Consensus 167 ~p~~~~~~~~~~~L~vi~G~~~g~~~~L~~~~~~~~~~~IGR~~~-~divl~d~~VSr~HA~I~~~~~~~~~~L~DlgSt 245 (413)
.|.+.......+.|+++.|+..+..+.|..+. +++|||.+. |||+|+|+.|||+||+|.++..++.|+|+|++|+
T Consensus 24 ~P~~a~~p~~~~~L~v~~g~~~g~~~~l~~~~----~~~IGR~~~~~di~l~d~~VSr~Ha~i~~~~~~~~~~l~Dl~S~ 99 (140)
T 2jpe_A 24 CPTWAGKPPPGLHLDVVKGDKLIEKLIIDEKK----YYLFGRNPDLCDFTIDHQSCSRVHAALVYHKHLKRVFLIDLNST 99 (140)
T ss_dssp CCSSBCCCCSSCBEEEESSSSEEEEECCSSCS----BCCBSSCTTTSSSCCCCSSSCTTSBEEEEBSSSCCEEEECCSCS
T ss_pred CCCcccCCCcCEEEEEEcCCCcceEEEeCCCC----eEEecCCCccCCEEeCCCCcChhheEEEEECCCCcEEEEECCCC
Confidence 44444444456889999999989999998753 489999998 9999999999999999999973347999999999
Q ss_pred CceeeCCeecCCCCCCCCCCCCceecCCCCEEEEcceeEEEEe
Q 015084 246 NGTLLNSQPINHPDSGSRHWGKPMELTSGDIITLGTTSSIHVQ 288 (413)
Q Consensus 246 NGT~VNg~~i~~~~~~~r~~g~~~~L~~GD~I~lG~~~~~~~~ 288 (413)
|||||||+++.+ ++++.|++||+|+||.+.+.|..
T Consensus 100 NGT~vNg~~l~~--------~~~~~L~~gd~i~~G~~~~~f~~ 134 (140)
T 2jpe_A 100 HGTFLGHIRLEP--------HKPQQIPIDSTVSFGASTRAYTL 134 (140)
T ss_dssp SCEESSSCEECS--------SSCCEECTTCCBBCSSCCCCBCC
T ss_pred CCeEECCEECCC--------CccEECCCCCEEEECCceEEEEE
Confidence 999999999996 56799999999999999877643
No 8
>2kb3_A Oxoglutarate dehydrogenase inhibitor; forkhead-associated domain, kinase substrate, GARA, FHA, cytoplasm, phosphoprotein; HET: TPO; NMR {Corynebacterium glutamicum} PDB: 2kb4_A
Probab=99.81 E-value=2.5e-19 Score=158.71 Aligned_cols=96 Identities=35% Similarity=0.541 Sum_probs=88.4
Q ss_pred CceEEEEEEeCCCCCeEEEeccCCCCCCcEEeCCCCCCCeEeCCcccccceeEEEEeCCcceEEEEEcCCCCceeeCCee
Q 015084 175 RSCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQP 254 (413)
Q Consensus 175 ~~~~~L~vi~G~~~g~~~~L~~~~~~~~~~~IGR~~~~divl~d~~VSr~HA~I~~~~~~~~~~L~DlgStNGT~VNg~~ 254 (413)
+..+.|+++.|+..+..+.|..+ .++|||.+.|||+|+|+.|||+||+|.++.+ .|+|+|++|+|||||||++
T Consensus 44 ~~~~~L~v~~G~~~g~~~~L~~~-----~~~IGR~~~~di~l~d~~VSr~Ha~I~~~~~--~~~l~DlgS~NGT~VNg~~ 116 (143)
T 2kb3_A 44 AGSALLVVKRGPNAGARFLLDQP-----TTTAGRHPESDIFLDDVTVSRRHAEFRINEG--EFEVVDVGSLNGTYVNREP 116 (143)
T ss_dssp SSCEEEEEEESTTTTCEEEECSS-----EEEESSCTTCSBCCCCSSCCSSSEEEEEETT--EEEEEESCCSSCCEETTEE
T ss_pred CccEEEEEEeCCCCCeEEEeCCC-----CeeccCCCCCCEEeCCCCcChhhEEEEEECC--EEEEEECCCcCCeEECCEE
Confidence 35789999999999999999876 5899999999999999999999999999765 7999999999999999999
Q ss_pred cCCCCCCCCCCCCceecCCCCEEEEcceeEEEEe
Q 015084 255 INHPDSGSRHWGKPMELTSGDIITLGTTSSIHVQ 288 (413)
Q Consensus 255 i~~~~~~~r~~g~~~~L~~GD~I~lG~~~~~~~~ 288 (413)
+.. +.|++||+|+||.+.+.|..
T Consensus 117 i~~-----------~~L~~GD~I~iG~~~l~f~~ 139 (143)
T 2kb3_A 117 RNA-----------QVMQTGDEIQIGKFRLVFLA 139 (143)
T ss_dssp CSE-----------EECCTTEEEEETTEEEEEEE
T ss_pred cce-----------EECCCCCEEEECCEEEEEEe
Confidence 985 89999999999999888764
No 9
>3po8_A RV0020C protein, putative uncharacterized protein TB39.8; FHA domain, synthetic peptide, peptide binding protein; 1.50A {Mycobacterium tuberculosis} SCOP: b.26.1.0 PDB: 3poa_A* 2lc1_A
Probab=99.80 E-value=2e-19 Score=149.36 Aligned_cols=93 Identities=29% Similarity=0.493 Sum_probs=83.5
Q ss_pred ceEEEEEEeCCCCCeEEEeccCCCCCCcEEeCCCCCCCeEeCCcccccceeEEEEeCCcceEEEEEcCCCCceeeCCeec
Q 015084 176 SCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQPI 255 (413)
Q Consensus 176 ~~~~L~vi~G~~~g~~~~L~~~~~~~~~~~IGR~~~~divl~d~~VSr~HA~I~~~~~~~~~~L~DlgStNGT~VNg~~i 255 (413)
..+.|.+..|+ ++.+.+..+ +++|||.+.||++++|+.||++||+|.++++ .|+|+|++|+|||||||+++
T Consensus 4 ~~~~l~~~~g~--g~~~~l~~~-----~~~IGR~~~~di~l~d~~vSr~Ha~i~~~~~--~~~l~Dl~S~nGt~vng~~i 74 (100)
T 3po8_A 4 TSVTLQLDDGS--GRTYQLREG-----SNIIGRGQDAQFRLPDTGVSRRHLEIRWDGQ--VALLADLNSTNGTTVNNAPV 74 (100)
T ss_dssp EEEEEEECSSS--CCEEECCSE-----EEEEESSTTCSEECCCTTSCSSCEEEEECSS--CEEEEECSCSSCCEETTEEC
T ss_pred cEEEEEEECCC--CcEEEECCC-----CEEEeCCCCCCEECCCCCcChhhCEEEEeCC--EEEEEECCCCCCEEECCEEC
Confidence 46788887775 789999886 5899999999999999999999999999765 79999999999999999999
Q ss_pred CCCCCCCCCCCCceecCCCCEEEEcceeEEEEe
Q 015084 256 NHPDSGSRHWGKPMELTSGDIITLGTTSSIHVQ 288 (413)
Q Consensus 256 ~~~~~~~r~~g~~~~L~~GD~I~lG~~~~~~~~ 288 (413)
.+ +.|++||+|+||.+.+.|.-
T Consensus 75 ~~-----------~~L~~gd~i~iG~~~~~~~~ 96 (100)
T 3po8_A 75 QE-----------WQLADGDVIRLGHSEIIVRM 96 (100)
T ss_dssp SE-----------EECCTTCEEEETTEEEEEEE
T ss_pred ce-----------EECCCCCEEEECCEEEEEEE
Confidence 75 89999999999999887754
No 10
>1r21_A Antigen KI-67; beta sandwich, cell cycle; NMR {Homo sapiens} SCOP: b.26.1.2 PDB: 2aff_A*
Probab=99.79 E-value=1.9e-19 Score=155.98 Aligned_cols=104 Identities=21% Similarity=0.208 Sum_probs=89.1
Q ss_pred ccCCCceEEEEEEe-CCCCCeEEEeccCCCCCCcEEeCCCCCCCeEeCCcccccceeEEEEeCCcceEEEEEcCCCCcee
Q 015084 171 IADQRSCLSLEVVS-GPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTL 249 (413)
Q Consensus 171 ~~~~~~~~~L~vi~-G~~~g~~~~L~~~~~~~~~~~IGR~~~~divl~d~~VSr~HA~I~~~~~~~~~~L~DlgStNGT~ 249 (413)
.+..+.+..|.++. ++..+..+.|..+ .++|||.+.|||+|+|+.||++||+|.++.+ .|+|+|++|+||||
T Consensus 6 ~g~~~~~~~L~v~~~~~~~g~~~~l~~~-----~~~IGR~~~~di~l~d~~VSr~Ha~i~~~~~--~~~l~Dl~S~nGt~ 78 (128)
T 1r21_A 6 PGGMWPTRRLVTIKRSGVDGPHFPLSLS-----TCLFGRGIECDIRIQLPVVSKQHCKIEIHEQ--EAILHNFSSTNPTQ 78 (128)
T ss_dssp ---CCCCEEEEEEEETTEEEEEEECCSS-----EEEEESSTTSSEECCCTTSCTTCEEEEECSS--CEEECCCCSSSCCE
T ss_pred CCCCCCceEEEEEeCCCCCceEEEECCC-----CEEECCCCCCCEEECCCCCChhHEEEEEECC--EEEEEECCCCCCEE
Confidence 34455678999997 5777889999875 5899999999999999999999999999875 79999999999999
Q ss_pred eCCeecCCCCCCCCCCCCceecCCCCEEEEcceeEEEEeeec
Q 015084 250 LNSQPINHPDSGSRHWGKPMELTSGDIITLGTTSSIHVQITS 291 (413)
Q Consensus 250 VNg~~i~~~~~~~r~~g~~~~L~~GD~I~lG~~~~~~~~~~~ 291 (413)
|||+++.. ++.|++||+|+||.+.+.|.....
T Consensus 79 vNg~~i~~----------~~~L~~Gd~i~iG~~~~~~~~~~~ 110 (128)
T 1r21_A 79 VNGSVIDE----------PVRLKHGDVITIIDRSFRYENESL 110 (128)
T ss_dssp ETTEECSS----------CEECCTTEEEECSSCEEEEEEC--
T ss_pred ECCEECCC----------cEEcCCCCEEEECCEEEEEEeCCc
Confidence 99999984 489999999999999988876543
No 11
>2kfu_A RV1827 PThr 22; FHA domain, phosphorylation, intramolecular interaction, glutamate metabolism, phosphoprotein, protein binding; HET: TPO; NMR {Mycobacterium tuberculosis} PDB: 2kkl_A
Probab=99.79 E-value=6e-19 Score=159.37 Aligned_cols=96 Identities=33% Similarity=0.531 Sum_probs=88.3
Q ss_pred ceEEEEEEeCCCCCeEEEeccCCCCCCcEEeCCCCCCCeEeCCcccccceeEEEEeCCcceEEEEEcCCCCceeeCCeec
Q 015084 176 SCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQPI 255 (413)
Q Consensus 176 ~~~~L~vi~G~~~g~~~~L~~~~~~~~~~~IGR~~~~divl~d~~VSr~HA~I~~~~~~~~~~L~DlgStNGT~VNg~~i 255 (413)
..+.|+++.|+..+..+.|..+ .++|||.+.|||+|+|+.|||+||+|.++.+ .|+|+|++|+|||||||+++
T Consensus 54 ~~~~L~v~~G~~~g~~~~L~~~-----~~~IGR~~~~di~l~d~~VSr~HA~I~~~~~--~~~l~DlgS~NGT~VNg~~i 126 (162)
T 2kfu_A 54 GSALLVVKRGPNAGSRFLLDQA-----ITSAGRHPDSDIFLDDVTVSRRHAEFRLENN--EFNVVDVGSLNGTYVNREPV 126 (162)
T ss_dssp SCCEEEEEESTTCSCEEETTSS-----EEEEESCSSSSEESTTTSSSSCSEEEEEETT--EEEEECCCCSSCEEETTBCC
T ss_pred ccEEEEEEeCCCCCeEEEECCC-----CEEECCCCCCCEEECCCCcChhhEEEEEECC--EEEEEECCCCCCeEECCEEc
Confidence 4679999999999999999876 5899999999999999999999999999875 79999999999999999998
Q ss_pred CCCCCCCCCCCCceecCCCCEEEEcceeEEEEee
Q 015084 256 NHPDSGSRHWGKPMELTSGDIITLGTTSSIHVQI 289 (413)
Q Consensus 256 ~~~~~~~r~~g~~~~L~~GD~I~lG~~~~~~~~~ 289 (413)
.. +.|++||+|+||.+.+.|...
T Consensus 127 ~~-----------~~L~~GD~I~iG~~~l~f~~~ 149 (162)
T 2kfu_A 127 DS-----------AVLANGDEVQIGKFRLVFLTG 149 (162)
T ss_dssp SE-----------EECCSSCEEEETTEEEEEECS
T ss_pred ce-----------EECCCCCEEEECCEEEEEEeC
Confidence 85 899999999999998888753
No 12
>3hx1_A SLR1951 protein; P74513_SYNY3, adenylate cyclase-like protein, NESG, structural genomics, PSI-2, protein structure initiative; 2.50A {Synechocystis SP}
Probab=99.77 E-value=1.3e-18 Score=151.78 Aligned_cols=101 Identities=19% Similarity=0.313 Sum_probs=85.3
Q ss_pred ceEEEEEEeCCCCCeEEEeccCCCCCCcEEeCCCCCCCeEeCCcccccceeEEEEeCCc---ceEEEEEc-----CCCCc
Q 015084 176 SCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNK---LKWELVDM-----GSLNG 247 (413)
Q Consensus 176 ~~~~L~vi~G~~~g~~~~L~~~~~~~~~~~IGR~~~~divl~d~~VSr~HA~I~~~~~~---~~~~L~Dl-----gStNG 247 (413)
....+.++.++..++.+.|... .++|||.+.|||+|+++.|||.||+|.++... +.|+|+|+ +|+||
T Consensus 9 ~~~~~lvv~~~~~~~~~~l~~~-----~~~IGR~~~~di~l~d~~VSr~Ha~I~~~~~~~g~~~~~l~Dl~~~~~~S~NG 83 (131)
T 3hx1_A 9 LQEHILIILDDAGRREVLLTET-----FYTIGRSPRADIRIKSQFVSRIHAVLVRKSSDDVQAAYRIIDGDEDGQSSVNG 83 (131)
T ss_dssp CCEEEEEEEETTEEEEEEECSS-----EEEEESSTTSSEECCCSSSCTTCEEEEEC------CCEEEEESCTTSCCCSSC
T ss_pred CcceEEEEECCCCcEEEEECCC-----CEEECCCCCCCEEECCCCcChhheEEEEEccCCCceEEEEEECCCCCCCCCCc
Confidence 4456666666666788999876 58999999999999999999999999987421 25999999 89999
Q ss_pred eeeCCeecCCCCCCCCCCCCceecCCCCEEEEcceeEEEEeeecc
Q 015084 248 TLLNSQPINHPDSGSRHWGKPMELTSGDIITLGTTSSIHVQITSE 292 (413)
Q Consensus 248 T~VNg~~i~~~~~~~r~~g~~~~L~~GD~I~lG~~~~~~~~~~~~ 292 (413)
|||||+++.. +.|++||+|+||.+.+.++.....
T Consensus 84 T~vNg~~i~~-----------~~L~~GD~I~iG~~~~~~~~~~~~ 117 (131)
T 3hx1_A 84 LMINGKKVQE-----------HIIQTGDEIVMGPQVSVRYEYRRR 117 (131)
T ss_dssp EEETTEEESE-----------EECCTTCEEECSTTCEEEEEEECC
T ss_pred eEECCEEeEe-----------EECCCCCEEEECCEEEEEEEEecC
Confidence 9999999985 899999999999999998876653
No 13
>3oun_A Putative uncharacterized protein TB39.8; peptidoglycan, Ser/Thr kinase, pseudokinase, FHA domain, REG phosphorylation; HET: TPO; 2.71A {Mycobacterium tuberculosis}
Probab=99.75 E-value=3.4e-18 Score=153.60 Aligned_cols=91 Identities=30% Similarity=0.515 Sum_probs=81.0
Q ss_pred ceEEEEEEeCCCCCeEEEeccCCCCCCcEEeCCCCCCCeEeCCcccccceeEEEEeCCcceEEEEEcCCCCceeeCCeec
Q 015084 176 SCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQPI 255 (413)
Q Consensus 176 ~~~~L~vi~G~~~g~~~~L~~~~~~~~~~~IGR~~~~divl~d~~VSr~HA~I~~~~~~~~~~L~DlgStNGT~VNg~~i 255 (413)
..+.|.+..|+ ++.+.|..+ .++|||.+.|||+|+|+.|||+||+|.++.+ .|+|+|++|+|||||||++|
T Consensus 66 ~~l~L~v~~g~--g~~~~L~~~-----~~~IGR~~~~dI~L~d~~VSr~HA~I~~~~~--~~~l~DlgStNGT~VNG~~i 136 (157)
T 3oun_A 66 TSVTLQLDDGS--GRTYQLREG-----SNIIGRGQDAQFRLPDTGVSRRHLEIRWDGQ--VALLADLNSTNGTTVNNAPV 136 (157)
T ss_dssp -CCEEEETTTT--CCEEECCSE-----EEEEESSTTCSEECCCTTSCTTCEEEEECSS--CEEEEECSCSSCCEETTEEC
T ss_pred cEEEEEEcCCC--CeEEEECCC-----cEEEEeCCCCCEEeCCCCcChhHEEEEEECC--EEEEEECCCCCCeEECCEEC
Confidence 35666666665 789999886 5899999999999999999999999999775 69999999999999999999
Q ss_pred CCCCCCCCCCCCceecCCCCEEEEcceeEEE
Q 015084 256 NHPDSGSRHWGKPMELTSGDIITLGTTSSIH 286 (413)
Q Consensus 256 ~~~~~~~r~~g~~~~L~~GD~I~lG~~~~~~ 286 (413)
.+ +.|++||+|+||.+.+.|
T Consensus 137 ~~-----------~~L~~GD~I~lG~~~l~f 156 (157)
T 3oun_A 137 QE-----------WQLADGDVIRLGHSEIIV 156 (157)
T ss_dssp SE-----------EECCTTCEEEETTEEEEE
T ss_pred ce-----------EECCCCCEEEECCEEEEE
Confidence 85 899999999999998876
No 14
>1lgp_A Cell cycle checkpoint protein CHFR; FHA, tungstate, domain swapping; 2.00A {Homo sapiens} SCOP: b.26.1.2 PDB: 1lgq_A
Probab=99.74 E-value=3.8e-18 Score=145.17 Aligned_cols=93 Identities=23% Similarity=0.241 Sum_probs=80.0
Q ss_pred ceEEEEEEeCCCCCeEEEeccCCCCCCcEEeCCCCCCCeEeCCc-ccccceeEEEEeCCcceEEEEEcCCCCceeeCCee
Q 015084 176 SCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDS-EVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQP 254 (413)
Q Consensus 176 ~~~~L~vi~G~~~g~~~~L~~~~~~~~~~~IGR~~~~divl~d~-~VSr~HA~I~~~~~~~~~~L~DlgStNGT~VNg~~ 254 (413)
.+..|..+.+...+..+.|... +++|||.+.||++|+++ .|||+||+|.++..++.|+|+| +|+|||||||++
T Consensus 3 ~wg~L~~~~~~~~~~~~~l~~~-----~~~iGR~~~~di~l~~~~~vSr~Ha~i~~~~~~~~~~l~D-~S~NGt~vng~~ 76 (116)
T 1lgp_A 3 PWGRLLRLGAEEGEPHVLLRKR-----EWTIGRRRGCDLSFPSNKLVSGDHCRIVVDEKSGQVTLED-TSTSGTVINKLK 76 (116)
T ss_dssp CCEEECCTTCCSSSCCEEECSS-----EEEEESSTTSSEECTTCTTSCTTCEEEEECTTTCCEEEEE-CSSSCCCCCCCC
T ss_pred CEEEEEEeCCCCCccEEEECCC-----CEEECCCCCCCEEeCCCCCCChhHeEEEEECCCCeEEEEE-CCcCCcEECCEE
Confidence 3567777766566678888866 68999999999999875 8999999999984335899999 999999999999
Q ss_pred cCCCCCCCCCCCCceecCCCCEEEEcce
Q 015084 255 INHPDSGSRHWGKPMELTSGDIITLGTT 282 (413)
Q Consensus 255 i~~~~~~~r~~g~~~~L~~GD~I~lG~~ 282 (413)
+.+ ++++.|++||+|+||..
T Consensus 77 l~~--------~~~~~L~~GD~i~~G~~ 96 (116)
T 1lgp_A 77 VVK--------KQTCPLQTGDVIYLVYR 96 (116)
T ss_dssp CCC--------SSCCCCCTTCEEEEECC
T ss_pred cCC--------CCcEECCCCCEEEEecc
Confidence 986 56799999999999986
No 15
>3els_A PRE-mRNA leakage protein 1; intrinsically unstructured domain, forkhead-associated domai domain, PRE-mRNA retention and splicing; 1.80A {Saccharomyces cerevisiae}
Probab=99.74 E-value=5.7e-18 Score=152.36 Aligned_cols=96 Identities=26% Similarity=0.342 Sum_probs=82.2
Q ss_pred CceEEEEEEeCCC----CCeEEEeccCCCCCCcEEeCCCC---------------CCCeEeCCcccccceeEEEEeCCcc
Q 015084 175 RSCLSLEVVSGPS----RGIRCSVQSANASRLPLTLGRVS---------------PSDVLLKDSEVSGKHALINWNPNKL 235 (413)
Q Consensus 175 ~~~~~L~vi~G~~----~g~~~~L~~~~~~~~~~~IGR~~---------------~~divl~d~~VSr~HA~I~~~~~~~ 235 (413)
+..+.|.+.+|+. ..+.+.|.... .++|||.+ .|||+|+++.|||+||+|.+..+++
T Consensus 29 ~~~~~l~v~k~g~~~~~~~~~~~L~~~~----~~~IGR~~~~~~~~~~~~~n~~~~~Di~l~~~~VSr~HA~I~~~~~~~ 104 (158)
T 3els_A 29 RTMYELVIYRKNDKDKGPWKRYDLNGRS----CYLVGRELGHSLDTDLDDRTEIVVADIGIPEETSSKQHCVIQFRNVRG 104 (158)
T ss_dssp SCCEEEEEEEGGGGGGCCSEEEECSSCS----EEEEEECCCC---------CCCCCCSEEECCTTSCSSCEEEEEEEETT
T ss_pred CCceEEEEEeCCccCcccceEEEecCCC----ceEeccccccccccccccccccccCCEEcCCCCCCcccEEEEEEccCC
Confidence 3568999997765 55789998765 59999995 4999999999999999999987521
Q ss_pred --eEEEEEcCCCCceeeCCeecCCCCCCCCCCCCceecCCCCEEEEcce
Q 015084 236 --KWELVDMGSLNGTLLNSQPINHPDSGSRHWGKPMELTSGDIITLGTT 282 (413)
Q Consensus 236 --~~~L~DlgStNGT~VNg~~i~~~~~~~r~~g~~~~L~~GD~I~lG~~ 282 (413)
.|+|+|++|+|||||||+++.. +.+++|++||+|+||..
T Consensus 105 ~~~~~l~Dl~StNGT~VNg~ri~~--------~~~~~L~~GD~I~~G~s 145 (158)
T 3els_A 105 ILKCYVMDLDSSNGTCLNNVVIPG--------ARYIELRSGDVLTLSEF 145 (158)
T ss_dssp EEEEEEEECSCSSCCEETTEECCT--------TCCEECCTTEEEESSSC
T ss_pred eeEEEEEeCCCCCccEECCEEcCC--------CceEEcCCCCEEEECCC
Confidence 3999999999999999999997 56799999999999954
No 16
>1dmz_A Protein (protein kinase SPK1); beta-sandwich, antiparallel beta-sheets, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2 PDB: 1fhq_A 1fhr_A* 1j4k_A* 1j4l_A* 1k2m_A* 1k2n_A*
Probab=99.73 E-value=4.3e-18 Score=153.03 Aligned_cols=101 Identities=18% Similarity=0.183 Sum_probs=88.3
Q ss_pred ceEEEEEEeCCCCCeEEEeccCCCCCCcEEeCCCCCCCeEeCCcccccceeEEEEeCC-------------cceEEEEEc
Q 015084 176 SCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPN-------------KLKWELVDM 242 (413)
Q Consensus 176 ~~~~L~vi~G~~~g~~~~L~~~~~~~~~~~IGR~~~~divl~d~~VSr~HA~I~~~~~-------------~~~~~L~Dl 242 (413)
..+.|.++.+...++.+.|..+.. +++|||.+.||++|+|+.|||+||+|.++.. .+.|+|+|+
T Consensus 4 ~~l~L~p~~~~~~~~~i~L~~~~~---~~~IGR~~~~di~l~d~~VSr~Ha~I~~~~~~~g~~~~~~~~~~~~~~~l~Dl 80 (158)
T 1dmz_A 4 RFLTLKPLPDSIIQESLEIQQGVN---PFFIGRSEDCNCKIEDNRLSRVHCFIFKKRHAVGKSMYESPAQGLDDIWYCHT 80 (158)
T ss_dssp CCEEEEECTTSSCCCCEEETTSCS---CEEEESSTTSSEECCCTTSCSSSEEEEEEECCCCCCCSSCSCSSCEEEEEEEC
T ss_pred eEEEEEeCCCCccceEEEEcCCCc---eEEECCCCCCCEEeCCCCcChHHeEEEEecCccccccccccccccccEEEEEC
Confidence 468899998888888999987632 6999999999999999999999999998751 047999999
Q ss_pred CCCCceeeCCeecCCCCCCCCCCCCceecCCCCEEEE-----cceeEEEEe
Q 015084 243 GSLNGTLLNSQPINHPDSGSRHWGKPMELTSGDIITL-----GTTSSIHVQ 288 (413)
Q Consensus 243 gStNGT~VNg~~i~~~~~~~r~~g~~~~L~~GD~I~l-----G~~~~~~~~ 288 (413)
|+|||||||++|.+ ++++.|++||+|+| |.+.+.|..
T Consensus 81 -StNGT~VNg~ri~~--------~~~~~L~~GD~I~l~~d~~G~~~l~f~~ 122 (158)
T 1dmz_A 81 -GTNVSYLNNNRMIQ--------GTKFLLQDGDEIKIIWDKNNKFVIGFKV 122 (158)
T ss_dssp -STTCCEETTEECCS--------SEEEECCSSCCEESCCCTTTTCCCCEEE
T ss_pred -CcCCeEECCEEcCC--------CceEEcCCCCEEEEeecCCCCEEEEEEE
Confidence 99999999999997 67899999999999 998877754
No 17
>1qu5_A Protein kinase SPK1; FHA, RAD53, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2
Probab=99.73 E-value=3.7e-18 Score=156.93 Aligned_cols=103 Identities=17% Similarity=0.179 Sum_probs=87.4
Q ss_pred CCceEEEEEEeCCCCCeEEEeccCCCCCCcEEeCCCCCCCeEeCCcccccceeEEEEeCC-------------cceEEEE
Q 015084 174 QRSCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPN-------------KLKWELV 240 (413)
Q Consensus 174 ~~~~~~L~vi~G~~~g~~~~L~~~~~~~~~~~IGR~~~~divl~d~~VSr~HA~I~~~~~-------------~~~~~L~ 240 (413)
....+.|....++..+..+.|..+.. +++|||.+.|||+|+++.|||.||+|.+... .+.|+|+
T Consensus 26 ~g~~l~L~~~~~~~~~~~i~L~~~~~---~~~IGR~~~~di~l~d~~VSr~HA~I~~~~~~~g~~~~e~~~~~~~~~~l~ 102 (182)
T 1qu5_A 26 NGRFLTLKPLPDSIIQESLEIQQGVN---PFFIGRSEDCNCKIEDNRLSRVHCFIFKKRHAVGKSMYESPAQGLDDIWYC 102 (182)
T ss_dssp SSCCEEECCCTTSSSCSCCCBTTCCS---SEEESSSTTSSSCCCCTTSCSSCEEEEEECCCCCSSCCSSCCCSCCEEEEC
T ss_pred CccEEEEEeCCCCCcceEEEEcCCCc---eEEECCCCCCCEEECCCCcChHHeEEEEecCccccccccccccccceEEEE
Confidence 34567777777777778888887632 5999999999999999999999999999761 0479999
Q ss_pred EcCCCCceeeCCeecCCCCCCCCCCCCceecCCCCEEEE-----cceeEEEEe
Q 015084 241 DMGSLNGTLLNSQPINHPDSGSRHWGKPMELTSGDIITL-----GTTSSIHVQ 288 (413)
Q Consensus 241 DlgStNGT~VNg~~i~~~~~~~r~~g~~~~L~~GD~I~l-----G~~~~~~~~ 288 (413)
|+ |+|||||||++|.+ +.++.|++||+|+| |.+.+.|..
T Consensus 103 Dl-StNGT~VNg~ri~~--------~~~~~L~~GD~I~l~~d~~G~~~l~f~~ 146 (182)
T 1qu5_A 103 HT-GTNVSYLNNNRMIQ--------GTKFLLQDGDEIKIIWDKNNKFVIGFKV 146 (182)
T ss_dssp CC-SSSCCEETTEECCS--------SEEEECCTTBCCEEEEEGGGTEEEECCE
T ss_pred EC-CcCCeEECCEEcCC--------CcceEcCCCCEEEEEEcCCCCEEEEEEE
Confidence 99 99999999999997 67899999999999 998877654
No 18
>1g3g_A Protien kinase SPK1; FHA domain, RAD53, phosphopeptide, phosphoprotein, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2 PDB: 1j4o_A 1j4p_A* 1j4q_A* 1k3j_A 1k3n_A* 1k3q_A* 2a0t_A* 2jqi_A*
Probab=99.73 E-value=9.2e-18 Score=151.71 Aligned_cols=97 Identities=27% Similarity=0.270 Sum_probs=83.9
Q ss_pred ceEEEEEEeCCCCCeEEEeccC------CCCCCcEEeCCCCCCCeEeCCc-ccccceeEEEEeCCcceEEEEEcCCCCce
Q 015084 176 SCLSLEVVSGPSRGIRCSVQSA------NASRLPLTLGRVSPSDVLLKDS-EVSGKHALINWNPNKLKWELVDMGSLNGT 248 (413)
Q Consensus 176 ~~~~L~vi~G~~~g~~~~L~~~------~~~~~~~~IGR~~~~divl~d~-~VSr~HA~I~~~~~~~~~~L~DlgStNGT 248 (413)
..+.|.++.|+..+..+.+..+ ...+..++|||.+.|||+|+|+ .||+.||+|.++.+ +.|+|+|+ |+|||
T Consensus 32 ~~~~L~v~~G~~~g~~~~l~~~~v~~~~~~~~~~~~IGR~~~~di~l~d~~~vSr~Ha~I~~~~~-g~~~l~Dl-S~NGT 109 (164)
T 1g3g_A 32 IVCRVICTTGQIPIRDLSADISQVLKEKRSIKKVWTFGRNPACDYHLGNISRLSNKHFQILLGED-GNLLLNDI-STNGT 109 (164)
T ss_dssp CCEEEECSSSSSCCEEECCCHHHHHHCSSSCCEEEEEESSSSSSEECCCCTTTTSSCEEEEECST-TCEEEEEC-CSSCE
T ss_pred ccEEEEEecCCCCCeEEEeccccccccccccCCcEEECCCCCCCEEeCCcCCcChhHEEEEECCC-CCEEEEEC-CCCCe
Confidence 4689999999999999998853 0011248999999999999998 69999999999644 47999999 99999
Q ss_pred eeCCeecCCCCCCCCCCCCceecCCCCEEEEcce
Q 015084 249 LLNSQPINHPDSGSRHWGKPMELTSGDIITLGTT 282 (413)
Q Consensus 249 ~VNg~~i~~~~~~~r~~g~~~~L~~GD~I~lG~~ 282 (413)
||||+++.+ +.++.|++||+|+||.+
T Consensus 110 ~vNg~~i~~--------~~~~~L~~GD~I~iG~~ 135 (164)
T 1g3g_A 110 WLNGQKVEK--------NSNQLLSQGDEITVGVG 135 (164)
T ss_dssp EETTEEECT--------TEEEECCTTCEEEESCS
T ss_pred EECCEEcCC--------CCceEcCCCCEEEECCC
Confidence 999999997 56799999999999996
No 19
>3elv_A PRE-mRNA leakage protein 1; intrinsically unstructured domain, forkhead-associated domai domain, PRE-mRNA retention and splicing; 2.40A {Saccharomyces cerevisiae} PDB: 2jkd_A
Probab=99.71 E-value=2.8e-17 Score=153.17 Aligned_cols=96 Identities=25% Similarity=0.326 Sum_probs=80.8
Q ss_pred ceEEEEEEeCCC----CCeEEEeccCCCCCCcEEeCCCC---------------CCCeEeCCcccccceeEEEEeCCcc-
Q 015084 176 SCLSLEVVSGPS----RGIRCSVQSANASRLPLTLGRVS---------------PSDVLLKDSEVSGKHALINWNPNKL- 235 (413)
Q Consensus 176 ~~~~L~vi~G~~----~g~~~~L~~~~~~~~~~~IGR~~---------------~~divl~d~~VSr~HA~I~~~~~~~- 235 (413)
..+.|.|..++. ....+.|.... .++|||.+ .|||+|+++.||++||.|.+..+++
T Consensus 77 ~~~~L~v~k~g~k~~~~i~~~~L~~~s----~y~IGR~~~~~~~~~~~~~~e~~~cDIvL~dp~VSR~HA~I~~~~~~~~ 152 (205)
T 3elv_A 77 TMYELVIYRKNDKDKGPWKRYDLNGRS----CYLVGRELGHSLDTDLDDRTEIVVADIGIPEETSSKQHCVIQFRNVRGI 152 (205)
T ss_dssp CCEEEEEEEGGGCTTCCSEEEECSSCS----EEEEEECCCC---------CCCCCCSEEECCTTSCTTCEEEEEEEETTE
T ss_pred CceEEEEEeCCCcccccceEEEecCCC----ceeecccccccccccccccccCccceEEeCCCCCCcccEEEEEecCCCc
Confidence 358999997654 45689997654 59999995 3999999999999999999876422
Q ss_pred -eEEEEEcCCCCceeeCCeecCCCCCCCCCCCCceecCCCCEEEEccee
Q 015084 236 -KWELVDMGSLNGTLLNSQPINHPDSGSRHWGKPMELTSGDIITLGTTS 283 (413)
Q Consensus 236 -~~~L~DlgStNGT~VNg~~i~~~~~~~r~~g~~~~L~~GD~I~lG~~~ 283 (413)
.|+|+|++|+|||||||++|.. +.++.|++||+|+||...
T Consensus 153 ~~~~l~DLgStNGTfVNG~rI~~--------~~~~~L~~GD~I~fG~s~ 193 (205)
T 3elv_A 153 LKCYVMDLDSSNGTCLNNVVIPG--------ARYIELRSGDVLTLSEFE 193 (205)
T ss_dssp EEEEEEECSCSSCCEETTEECCB--------TSCEECCTTCEEESSSSG
T ss_pred eeEEEEeCCCCCCCeECCEECCC--------CceeECCCCCEEEECCCC
Confidence 4999999999999999999986 466899999999999643
No 20
>2jqj_A DNA damage response protein kinase DUN1; protein/phosphopeptide, cell cycle; HET: DNA; NMR {Saccharomyces cerevisiae} PDB: 2jql_A*
Probab=99.71 E-value=8.2e-17 Score=143.42 Aligned_cols=99 Identities=24% Similarity=0.339 Sum_probs=81.3
Q ss_pred CceEEEEEEeCCCCCeEEEeccCCCCCCcEEeCCCCCCCeEeCCcccccceeEEEEe----C--CcceEEEEEcCCCCce
Q 015084 175 RSCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWN----P--NKLKWELVDMGSLNGT 248 (413)
Q Consensus 175 ~~~~~L~vi~G~~~g~~~~L~~~~~~~~~~~IGR~~~~divl~d~~VSr~HA~I~~~----~--~~~~~~L~DlgStNGT 248 (413)
+.+..|.++. +..+..+.|.... .++|||.+.|||+|+|+.||+.||+|.+. + .++.|+|+|+ |+|||
T Consensus 16 ~~~~~L~~~~-~~~g~~~~l~~~~----~~~IGR~~~~di~l~d~~VSr~Ha~I~~~~~~~~~~~~~~~~l~Dl-S~NGT 89 (151)
T 2jqj_A 16 TCLGHLVNLI-PGKEQKVEITNRN----VTTIGRSRSCDVILSEPDISTFHAEFHLLQMDVDNFQRNLINVIDK-SRNGT 89 (151)
T ss_dssp CEEEEEEEEE-TTEEEEEEEECCS----CEEEESSTTSSEECCCTTCCTTSEEEEEEEEEETTEEEEEEEEEEC-CSSCE
T ss_pred CceEEEEEec-CCCceEEEEcCCC----eEEeCCCCCCCEEECCCCCccccCEEEEecccCCcCcCCEEEEEEC-CCCCe
Confidence 3577787775 3457888887532 58999999999999999999999999993 1 2258999999 99999
Q ss_pred eeCCeecCCCCCCCCCCCCceecCCCCEEEEcce-eEEEEe
Q 015084 249 LLNSQPINHPDSGSRHWGKPMELTSGDIITLGTT-SSIHVQ 288 (413)
Q Consensus 249 ~VNg~~i~~~~~~~r~~g~~~~L~~GD~I~lG~~-~~~~~~ 288 (413)
||||++|.+ + ++.|++||+|+||.+ .+.|.-
T Consensus 90 ~VNg~~i~~--------~-~~~L~~GD~I~lG~~~~~~f~~ 121 (151)
T 2jqj_A 90 FINGNRLVK--------K-DYILKNGDRIVFGKSCSFLFKY 121 (151)
T ss_dssp EETTEECCS--------S-CEEECSSEEEEETTTEEEEEEE
T ss_pred EECCEEcCC--------C-ceECCCCCEEEECCCcEEEEEE
Confidence 999999986 4 699999999999995 444443
No 21
>2pie_A E3 ubiquitin-protein ligase RNF8; FHA domain, complex, ligase, signaling protein; HET: TPO; 1.35A {Homo sapiens} SCOP: b.26.1.2
Probab=99.71 E-value=1e-16 Score=140.74 Aligned_cols=85 Identities=28% Similarity=0.415 Sum_probs=73.3
Q ss_pred EeCCCCCeEEEeccCCCCCCcEEeCCCCCCCeEeCCcc----cccceeEEEEeCCcceEEEEEcCCCCceeeCCeecCCC
Q 015084 183 VSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSE----VSGKHALINWNPNKLKWELVDMGSLNGTLLNSQPINHP 258 (413)
Q Consensus 183 i~G~~~g~~~~L~~~~~~~~~~~IGR~~~~divl~d~~----VSr~HA~I~~~~~~~~~~L~DlgStNGT~VNg~~i~~~ 258 (413)
..|+..+ .+.+..+. +++|||.+.||++|+++. |||+||+|.++.+ +.|+|+|++|+|||||||+++.+
T Consensus 14 ~~G~~~~-~~~l~~~~----~~~IGR~~~~di~l~~~~~~~~VSr~Ha~i~~~~~-g~~~l~Dl~S~NGT~vNg~~l~~- 86 (138)
T 2pie_A 14 RVGMSAG-WLLLEDGC----EVTVGRGFGVTYQLVSKICPLMISRNHCVLKQNPE-GQWTIMDNKSLNGVWLNRARLEP- 86 (138)
T ss_dssp ETTCSSC-BEEECTTC----CEEEESSSSSSEECCCSSCTTSSCSSCEEEEECTT-SCEEEEECSCSSCEEETTEECCT-
T ss_pred EeCCCCC-EEEecCCC----eEEECCCCCCCEEeCCCCcCCCCChhHeEEEEcCC-CcEEEEECCCCCCeEECCEEcCC-
Confidence 3465554 67776432 589999999999999998 9999999999654 47999999999999999999987
Q ss_pred CCCCCCCCCceecCCCCEEEEcc
Q 015084 259 DSGSRHWGKPMELTSGDIITLGT 281 (413)
Q Consensus 259 ~~~~r~~g~~~~L~~GD~I~lG~ 281 (413)
++++.|++||+|+||.
T Consensus 87 -------~~~~~L~~GD~I~lG~ 102 (138)
T 2pie_A 87 -------LRVYSIHQGDYIQLGV 102 (138)
T ss_dssp -------TCCEECCTTCEEEESC
T ss_pred -------CCcEECCCCCEEEECC
Confidence 6789999999999998
No 22
>1gxc_A CHK2, CDS1, serine/threonine-protein kinase CHK2; phosphoprotein-binding domain, checkpoint kinase, transferase; HET: TPO; 2.7A {Homo sapiens} SCOP: b.26.1.2
Probab=99.70 E-value=9.2e-17 Score=142.86 Aligned_cols=92 Identities=20% Similarity=0.161 Sum_probs=78.3
Q ss_pred ceEEEEEEeCCCCCeEEEeccCCCCCCcEEeCCCCCCCeEeCCcc---------cccceeEEEEeCCc---ceEEEEEcC
Q 015084 176 SCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSE---------VSGKHALINWNPNK---LKWELVDMG 243 (413)
Q Consensus 176 ~~~~L~vi~G~~~g~~~~L~~~~~~~~~~~IGR~~~~divl~d~~---------VSr~HA~I~~~~~~---~~~~L~Dlg 243 (413)
.+..|..+.+... .+.|... .++|||.+.||++|+++. |||+||+|.++.++ +.|+|+|+
T Consensus 29 ~w~~L~~~~~~~~--~i~L~~~-----~~~IGR~~~~di~l~d~~~~~~~~~~~VSr~Ha~I~~~~~~~~~~~~~i~D~- 100 (149)
T 1gxc_A 29 PWARLWALQDGFA--NLECVND-----NYWFGRDKSCEYCFDEPLLKRTDKYRTYSKKHFRIFREVGPKNSYIAYIEDH- 100 (149)
T ss_dssp CCEEEEECSTTCC--CEEECSS-----EEEEESSTTCSEECCCGGGGGSSGGGGSCTTCEEEEEEECTTSSEEEEEEEC-
T ss_pred eeEEEEEcCCCCc--eEEECCC-----CEEecCCCCCCEEECCccccccccCCcCchhheEEEEECCCCceeEEEEEEC-
Confidence 5678888776443 4777765 589999999999999985 99999999998751 27999996
Q ss_pred CCCceeeCCeecCCCCCCCCCCCCceecCCCCEEEEccee
Q 015084 244 SLNGTLLNSQPINHPDSGSRHWGKPMELTSGDIITLGTTS 283 (413)
Q Consensus 244 StNGT~VNg~~i~~~~~~~r~~g~~~~L~~GD~I~lG~~~ 283 (413)
|+|||||||++|.+ +.++.|++||+|+||...
T Consensus 101 StNGT~VNg~~i~~--------~~~~~L~~GD~I~lG~~~ 132 (149)
T 1gxc_A 101 SGNGTFVNTELVGK--------GKRRPLNNNSEIALSLSR 132 (149)
T ss_dssp CSSCEEETTEECCT--------TCEEECCTTEEEEESSTT
T ss_pred CCCCeEECCEECCC--------CCeEECCCCCEEEECCCC
Confidence 99999999999997 678999999999999964
No 23
>2csw_A Ubiquitin ligase protein RNF8; 11-stranded beta sandwich, ring finger protein 8, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.26.1.2
Probab=99.69 E-value=5.3e-17 Score=143.78 Aligned_cols=91 Identities=27% Similarity=0.403 Sum_probs=76.6
Q ss_pred eEEEEEEeCCCCCeEEEeccCCCCCCcEEeCCCCCCCeEeCCcc----cccceeEEEEeCCcceEEEEEcCCCCceeeCC
Q 015084 177 CLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSE----VSGKHALINWNPNKLKWELVDMGSLNGTLLNS 252 (413)
Q Consensus 177 ~~~L~vi~G~~~g~~~~L~~~~~~~~~~~IGR~~~~divl~d~~----VSr~HA~I~~~~~~~~~~L~DlgStNGT~VNg 252 (413)
.+.|+ ..|+..+ .+.+..+. +++|||.+.||++|+++. |||+||+|.++.+ +.|+|+|++|+|||||||
T Consensus 17 ~w~L~-~~G~~~~-~~~l~~~~----~~~IGR~~~~di~l~~~~~~~~VSr~Ha~i~~~~~-g~~~l~Dl~S~NGT~vNg 89 (145)
T 2csw_A 17 SWCLR-RVGMSAG-WLLLEDGC----EVTVGRGFGVTYQLVSKICPLMISRNHCVLKQNPE-GQWTIMDNKSLNGVWLNR 89 (145)
T ss_dssp EEEEC-CTTCSCC-BEECCTTC----CEEEESSTTSSEECCCSSCGGGSCTTCEEEEECTT-SCEEEEBSSCSSCEEESS
T ss_pred cEEEE-EeCCCCC-eEEeCCCC----cEEECCCCCCCEEECCCCcCCCCChhHeEEEEcCC-CeEEEEECCCCCCeEECC
Confidence 45555 6676665 55664432 589999999999999998 9999999999654 479999999999999999
Q ss_pred eecCCCCCCCCCCCCceecCCCCEEEEcce
Q 015084 253 QPINHPDSGSRHWGKPMELTSGDIITLGTT 282 (413)
Q Consensus 253 ~~i~~~~~~~r~~g~~~~L~~GD~I~lG~~ 282 (413)
+++.+ ++++.|++||+|+||..
T Consensus 90 ~~i~~--------~~~~~L~~GD~I~iG~~ 111 (145)
T 2csw_A 90 ARLEP--------LRVYSIHQGDYIQLGVP 111 (145)
T ss_dssp CBCCB--------TCCEECCSSCCEEESCC
T ss_pred EECCC--------CccEECCCCCEEEECCC
Confidence 99986 57899999999999993
No 24
>1wln_A Afadin; beta sandwich, FHA domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.26.1.2
Probab=99.69 E-value=1.2e-16 Score=136.91 Aligned_cols=95 Identities=17% Similarity=0.086 Sum_probs=79.5
Q ss_pred eEEEEEEeC-CCC----CeEEEeccCCCCCCcEEeCC--CCCCCeEeCCcccccceeEEEEeCCcceEEEEEcCCCCcee
Q 015084 177 CLSLEVVSG-PSR----GIRCSVQSANASRLPLTLGR--VSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTL 249 (413)
Q Consensus 177 ~~~L~vi~G-~~~----g~~~~L~~~~~~~~~~~IGR--~~~~divl~d~~VSr~HA~I~~~~~~~~~~L~DlgStNGT~ 249 (413)
...|.++.+ +.. +..+.|..+ .++||| .+.|||+|+++.||++||+|.+..+ .|+|+|++|+||||
T Consensus 11 ~p~Lv~l~~d~~~s~~~~~~~~L~~~-----~~~IGr~r~~~~di~l~~~~vSr~Ha~i~~~~~--~~~l~dl~S~ngt~ 83 (120)
T 1wln_A 11 LPYLVELSPDGSDSRDKPKLYRLQLS-----VTEVGTEKFDDNSIQLFGPGIQPHHCDLTNMDG--VVTVTPRSMDAETY 83 (120)
T ss_dssp CCEEEEECSSSCCCSSCCCEEECCSE-----EEECSSSCCSTTCCCCCCTTCCSSCEEEEESSS--CEEEEESCSSSCEE
T ss_pred cCEEEEeCCChhhccCccEEEEECCC-----CEEECCCCCCCCcEEECCCCCchhheEEEEcCC--EEEEEECCCCCCEE
Confidence 456777764 222 788999877 479996 4799999999999999999999764 79999999999999
Q ss_pred eCCeecCCCCCCCCCCCCceecCCCCEEEEcc-eeEEEEe
Q 015084 250 LNSQPINHPDSGSRHWGKPMELTSGDIITLGT-TSSIHVQ 288 (413)
Q Consensus 250 VNg~~i~~~~~~~r~~g~~~~L~~GD~I~lG~-~~~~~~~ 288 (413)
|||++|.. ++.|++||+|+||. ..+.|..
T Consensus 84 vNg~~i~~----------~~~L~~GD~I~iG~~~~~~f~~ 113 (120)
T 1wln_A 84 VDGQRISE----------TTMLQSGMRLQFGTSHVFKFVD 113 (120)
T ss_dssp ETSCBCSS----------CEEECTTCEEEETTTEEEEEEC
T ss_pred ECCEEcCC----------CEECCCCCEEEECCceEEEEEC
Confidence 99999985 48999999999999 5555543
No 25
>1g6g_A Protein kinase RAD53; beta-sandwich, phosphopeptide complex, cell cycle; HET: TPO; 1.60A {Saccharomyces cerevisiae} SCOP: b.26.1.2
Probab=99.68 E-value=1.5e-16 Score=137.80 Aligned_cols=97 Identities=27% Similarity=0.272 Sum_probs=79.0
Q ss_pred eEEEEEEeCCCCCeEEEeccC------CCCCCcEEeCCCCCCCeEeCCc-ccccceeEEEEeCCcceEEEEEcCCCCcee
Q 015084 177 CLSLEVVSGPSRGIRCSVQSA------NASRLPLTLGRVSPSDVLLKDS-EVSGKHALINWNPNKLKWELVDMGSLNGTL 249 (413)
Q Consensus 177 ~~~L~vi~G~~~g~~~~L~~~------~~~~~~~~IGR~~~~divl~d~-~VSr~HA~I~~~~~~~~~~L~DlgStNGT~ 249 (413)
..+|....|......+....+ ...+.+++|||.+.||++|+|+ .||+.||+|.++.+ +.|+|+|+ |+||||
T Consensus 5 ~~~L~~~~~~~p~~~l~~~~~~i~~~~~~~~~~~~IGR~~~~di~l~~~~~vSr~Ha~i~~~~~-g~~~l~Dl-S~NGT~ 82 (127)
T 1g6g_A 5 VCRVICTTGQIPIRDLSADISQVLKEKRSIKKVWTFGRNPACDYHLGNISRLSNKHFQILLGED-GNLLLNDI-STNGTW 82 (127)
T ss_dssp EEEEEESSSSSCCEEEEECHHHHHHCCSSCCEEEEEESSTTSSEECCSCTTSCSSCEEEEECTT-SCEEEEEC-CSSCCE
T ss_pred EEEEEECCCCCCceEeeccccceeeeeecCCCCEEECCCCCCCEEeCCCCCCChhHeEEEECCC-CcEEEEEC-CcCCeE
Confidence 567777777776666655421 0112258999999999999997 69999999999644 47999999 999999
Q ss_pred eCCeecCCCCCCCCCCCCceecCCCCEEEEccee
Q 015084 250 LNSQPINHPDSGSRHWGKPMELTSGDIITLGTTS 283 (413)
Q Consensus 250 VNg~~i~~~~~~~r~~g~~~~L~~GD~I~lG~~~ 283 (413)
|||+++.+ ++++.|++||+|+||.+.
T Consensus 83 vNg~~l~~--------~~~~~L~~Gd~I~lG~~~ 108 (127)
T 1g6g_A 83 LNGQKVEK--------NSNQLLSQGDEITVGVGV 108 (127)
T ss_dssp ETTEECCT--------TCCEECCTTCEEEECTTS
T ss_pred ECCEEcCC--------CCeEEcCCCCEEEECCCc
Confidence 99999997 678999999999999974
No 26
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=99.61 E-value=2e-15 Score=152.96 Aligned_cols=86 Identities=24% Similarity=0.357 Sum_probs=77.3
Q ss_pred CCeEEEeccCCCCCCcEEeCCCCCCCeEeCCcccccceeEEEEeCCcceEEEEEcCCCCceeeCCeecCCCCCCCCCCCC
Q 015084 188 RGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQPINHPDSGSRHWGK 267 (413)
Q Consensus 188 ~g~~~~L~~~~~~~~~~~IGR~~~~divl~d~~VSr~HA~I~~~~~~~~~~L~DlgStNGT~VNg~~i~~~~~~~r~~g~ 267 (413)
.|..+.|..+ +++|||.+.|||+|+|+.||++||.|.++++ .|+|+|++|+|||||||+++..
T Consensus 297 ~g~~~~l~~~-----~~~iGR~~~~di~l~~~~vSr~Ha~i~~~~~--~~~l~Dl~S~nGt~vng~~i~~---------- 359 (388)
T 2ff4_A 297 SGRGYPLQAA-----ATRIGRLHDNDIVLDSANVSRHHAVIVDTGT--NYVINDLRSSNGVHVQHERIRS---------- 359 (388)
T ss_dssp TCCEEECCSS-----EEEEESSTTSSEECCCTTSCTTCEEEEECSS--CEEEEECSCSSCCEETTEECSS----------
T ss_pred CCcEEEECCC-----CEEEecCCCCeEEECCCccChhHeEEEEECC--EEEEEECCCCCCeEECCEECCC----------
Confidence 3678999886 5899999999999999999999999999765 7999999999999999999963
Q ss_pred ceecCCCCEEEEcceeEEEEeee
Q 015084 268 PMELTSGDIITLGTTSSIHVQIT 290 (413)
Q Consensus 268 ~~~L~~GD~I~lG~~~~~~~~~~ 290 (413)
++.|++||+|+||.+.+.|....
T Consensus 360 ~~~L~~gd~i~~G~~~~~~~~~~ 382 (388)
T 2ff4_A 360 AVTLNDGDHIRICDHEFTFQISA 382 (388)
T ss_dssp EEEECTTCEEEETTEEEEEECSC
T ss_pred ceECCCCCEEEECCEEEEEEeCC
Confidence 48999999999999998887543
No 27
>4ejq_A Kinesin-like protein KIF1A; homodimer, FHA domain, transport protein; 1.89A {Homo sapiens} PDB: 2eh0_A 2g1l_A
Probab=99.52 E-value=4.7e-14 Score=126.15 Aligned_cols=92 Identities=16% Similarity=0.237 Sum_probs=74.6
Q ss_pred eEEEEEEe-CCCC-C-eEEEeccCCCCCCcEEeCCCC---CCCeEeCCcccccceeEEEEeCCc--ceEEEEEcCCCCce
Q 015084 177 CLSLEVVS-GPSR-G-IRCSVQSANASRLPLTLGRVS---PSDVLLKDSEVSGKHALINWNPNK--LKWELVDMGSLNGT 248 (413)
Q Consensus 177 ~~~L~vi~-G~~~-g-~~~~L~~~~~~~~~~~IGR~~---~~divl~d~~VSr~HA~I~~~~~~--~~~~L~DlgStNGT 248 (413)
...|.-++ .|.. + ..|.|..+ ..+|||.. .|||+|.++.||++||.|.++.++ ..+++.|++|+|||
T Consensus 38 ~PhLvnLn~Dp~ls~~lvy~L~~g-----~t~IGR~~~~~~~DI~L~~~~Vs~~H~~i~~~~~~~~~~~~~~d~~S~ngt 112 (154)
T 4ejq_A 38 TPHLVNLNEDPLMSECLLYYIKDG-----ITRVGREDGERRQDIVLSGHFIKEEHCVFRSDSRGGSEAVVTLEPCEGADT 112 (154)
T ss_dssp SCEEEECCCCTTCSSEEEEECCSE-----EEEEECSSCSSCCSEECCCTTCCSEEEEEEEECTTSSSCEEEEEECTTCCE
T ss_pred CceEEEecCCcccCceEEEEeCCC-----CEEEcCCCCCCCCCEEECCCCcccccEEEEEecCCCceeEEEEecCCCCce
Confidence 34565553 3332 2 45778877 47999976 799999999999999999998753 25889999999999
Q ss_pred eeCCeecCCCCCCCCCCCCceecCCCCEEEEccee
Q 015084 249 LLNSQPINHPDSGSRHWGKPMELTSGDIITLGTTS 283 (413)
Q Consensus 249 ~VNg~~i~~~~~~~r~~g~~~~L~~GD~I~lG~~~ 283 (413)
||||++|.. ++.|++||+|.||.+.
T Consensus 113 ~VNG~~i~~----------~~~L~~GD~I~~G~~~ 137 (154)
T 4ejq_A 113 YVNGKKVTE----------PSILRSGNRIIMGKSH 137 (154)
T ss_dssp EETTEECCS----------CEECCTTCEEEETTTE
T ss_pred EECCEEcCC----------ceECCCCCEEEECCcE
Confidence 999999974 4899999999999875
No 28
>3fm8_A Kinesin-like protein KIF13B; kinesin, GAP, GTPase activation, structural genomics consort ATP-binding, cytoskeleton, microtubule, motor protein, NUCL binding; 2.30A {Homo sapiens} PDB: 3mdb_A*
Probab=99.51 E-value=6.8e-14 Score=121.00 Aligned_cols=90 Identities=18% Similarity=0.241 Sum_probs=72.8
Q ss_pred eEEEEEEeC-CCC--CeEEEeccCCCCCCcEEeCCCCCCCeEeCCcccccceeEEEEeCCcceEEEEEcCCCCceeeCCe
Q 015084 177 CLSLEVVSG-PSR--GIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQ 253 (413)
Q Consensus 177 ~~~L~vi~G-~~~--g~~~~L~~~~~~~~~~~IGR~~~~divl~d~~VSr~HA~I~~~~~~~~~~L~DlgStNGT~VNg~ 253 (413)
...|..+++ +.. ...+.|..+ .+|||.+.|||+|.++.||++||.|.++.+ +.|+|+|++ +|||||||+
T Consensus 26 ~PhLvnLn~Dp~~s~~l~y~L~~~------t~IGR~~~~DI~L~~~~Vs~~Ha~I~~~~~-g~~~l~dl~-~ngt~VNG~ 97 (124)
T 3fm8_A 26 KCFLVNLNADPALNELLVYYLKEH------TLIGSANSQDIQLCGMGILPEHCIIDITSE-GQVMLTPQK-NTRTFVNGS 97 (124)
T ss_dssp -CEEEETTCCTTSSCCCEEECCSE------EEEESSTTCSEECCSTTCCSSCEEEEECTT-SCEEEEECT-TCCEEETTE
T ss_pred ccEEEEeCCCCccCceEEEECCCC------eEECCCCCCCEEECCCCeecceEEEEECCC-CeEEEEECC-CCCEEECCE
Confidence 446666644 332 245667654 699999999999999999999999998654 479999995 899999999
Q ss_pred ecCCCCCCCCCCCCceecCCCCEEEEcceeE
Q 015084 254 PINHPDSGSRHWGKPMELTSGDIITLGTTSS 284 (413)
Q Consensus 254 ~i~~~~~~~r~~g~~~~L~~GD~I~lG~~~~ 284 (413)
+|.. ++.|++||+|.||...+
T Consensus 98 ~V~~----------~~~L~~GD~I~lG~~~~ 118 (124)
T 3fm8_A 98 SVSS----------PIQLHHGDRILWGNNHF 118 (124)
T ss_dssp ECCS----------CEEECTTCEEEETTTEE
T ss_pred EcCC----------cEECCCCCEEEECCCeE
Confidence 9985 48999999999997653
No 29
>4a0e_A YSCD, type III secretion protein; transport protein, SAD phasing, type III secretion system; 2.04A {Yersinia pestis} PDB: 4d9v_A
Probab=99.46 E-value=1.4e-13 Score=118.44 Aligned_cols=97 Identities=20% Similarity=0.279 Sum_probs=87.8
Q ss_pred ceEEEEEEeCCCCCeEEEeccCCCCCCcEEeCCCC-CCCeEeCCcccccceeEEEEeCCcceEEEEEcCCCCceeeCCee
Q 015084 176 SCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVS-PSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQP 254 (413)
Q Consensus 176 ~~~~L~vi~G~~~g~~~~L~~~~~~~~~~~IGR~~-~~divl~d~~VSr~HA~I~~~~~~~~~~L~DlgStNGT~VNg~~ 254 (413)
..+.|++++|+..|..+.|..+ .++||.++ .||++|.|+.||+.||+|....+ .|+|+ +|+||||+||++
T Consensus 3 ~~~klrvlsG~~~G~~l~L~~~-----~~~IGs~~~~~DLvL~D~~Vs~~H~~L~~~~~--g~~L~--~s~ngt~vdG~~ 73 (123)
T 4a0e_A 3 GSWVCRFYQGKHRGVEVELPHG-----RCVFGSDPLQSDIVLSDSEIAPVHLVLMVDEE--GIRLT--DSAEPLLQEGLP 73 (123)
T ss_dssp CCEEEEECSGGGTTCEEEECSE-----EEEEESCTTTCSEECCCTTSCSSCEEEEEETT--EEEEE--EESSCCEETTEE
T ss_pred ceEEEEEecCCCCCcEEEcCCC-----cEEECCCCCCCCEEEeCCCccceeEEEEECCC--eEEEE--eccCCEEECCEE
Confidence 3588999999999999999987 59999999 99999999999999999999987 69998 589999999999
Q ss_pred cCCCCCCCCCCCCceecCCCCEEEEcceeEEEEeeec
Q 015084 255 INHPDSGSRHWGKPMELTSGDIITLGTTSSIHVQITS 291 (413)
Q Consensus 255 i~~~~~~~r~~g~~~~L~~GD~I~lG~~~~~~~~~~~ 291 (413)
+.. ...|.+|+.|.+|.+.+.|.....
T Consensus 74 v~~----------~~~L~~g~~l~lG~~~l~~~~~~~ 100 (123)
T 4a0e_A 74 VPL----------GTLLRAGSCLEVGFLLWTFVAVGQ 100 (123)
T ss_dssp CCT----------TCBCCTTSCEEETTEEEEEEETTS
T ss_pred ccc----------ccccCCCCEEEEccEEEEEEcCCC
Confidence 875 248999999999999999987543
No 30
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii}
Probab=99.44 E-value=5.3e-14 Score=141.67 Aligned_cols=86 Identities=13% Similarity=0.108 Sum_probs=68.7
Q ss_pred CCcccCCCceeeeecCCCCCCcceEEEEecCCChhHHHHHHhhhHHHHHHHHhhhhhhhhhccCcccHHHHHHHHHHHHH
Q 015084 313 GAKKLPMEDVCYYHWPLPGVDKFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKRERLLSQCDASDVLRDAFFQTE 392 (413)
Q Consensus 313 ggrr~tMEDah~~~~~l~~~~~~~~FGVFDGHGG~~aA~fas~~L~~~I~~~l~~~~~~~~~~~~~~i~~aL~~AF~~~D 392 (413)
.|+|.+|||+|++..++....+.+||||||||||..||+||+++|+++|.+... ...++|++||.++|
T Consensus 21 ~G~R~~nED~~~v~~~~~~~~~~~lf~VfDGHGG~~as~~a~~~l~~~l~~~~~------------~~~~~l~~a~~~~d 88 (364)
T 2isn_A 21 LGRRPTDEDAILVSAPATSRPNVRIKAVFDGHAGEATSQYCAKHAAKHLGKLSE------------FTFAEVKKACLSLD 88 (364)
T ss_dssp CTTSSSCCEEEEEECC----CCEEEEEEEEEESCSHHHHHHHHHHHHHHTTCSS------------CCHHHHHHHHHHHH
T ss_pred CCCCCcCCCeeEEeccCCCCCCeEEEEEEECCCCHHHHHHHHHHHHHHHHHhhc------------ccHHHHHHHHHHHH
Confidence 456789999999988877777889999999999999999999999998864211 12578999999999
Q ss_pred HHhccC-----CCCceeEEEEEe
Q 015084 393 ASMNHH-----YEVLFHTRFLLF 410 (413)
Q Consensus 393 ~~l~~~-----~sG~TA~vvlI~ 410 (413)
+.|.+. ..|||+++++|.
T Consensus 89 ~~i~~~~~~~~~~GtT~v~~~i~ 111 (364)
T 2isn_A 89 AEIIRKLGPKHVAGSTGIIVAIE 111 (364)
T ss_dssp HHHHHHHCSSSCCEECEEEEEEE
T ss_pred HHHHHhcccCCCCCcceehhhhh
Confidence 998543 579999999885
No 31
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B*
Probab=99.42 E-value=1.2e-13 Score=137.40 Aligned_cols=98 Identities=17% Similarity=0.143 Sum_probs=74.1
Q ss_pred CCcccCCCceeeeecCCCC------------------CCcceEEEEecCCChhHHHHHHhhhHHHHHHHHhhhhhhh---
Q 015084 313 GAKKLPMEDVCYYHWPLPG------------------VDKFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKR--- 371 (413)
Q Consensus 313 ggrr~tMEDah~~~~~l~~------------------~~~~~~FGVFDGHGG~~aA~fas~~L~~~I~~~l~~~~~~--- 371 (413)
.|+|..|||+|.+.+++.. ..+.+||||||||||..+++||++++++.|.+.+......
T Consensus 22 ~G~R~~nEDa~~~~~~~~~~p~~~~~~~~~g~~~~~~~~~~~l~~V~DGhGG~~~~~~as~~~~~~l~~~~~~~~~~~~~ 101 (337)
T 3qn1_B 22 QGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCK 101 (337)
T ss_dssp CTTSSSCCEEEEEEEEEEEEEGGGTC----------CEEEEEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHTC-----
T ss_pred eeCCchhhhHHHHHhhhhcccchhcccccccccccccCCCeEEEEEEeCCCChhHHHHHHHHHHHHHHHHHHhhhhhhhc
Confidence 5667889999999876432 1257799999999999999999999999998866531100
Q ss_pred h--hccCcccHHHHHHHHHHHHHHHhccC-------------------CCCceeEEEEEe
Q 015084 372 E--RLLSQCDASDVLRDAFFQTEASMNHH-------------------YEVLFHTRFLLF 410 (413)
Q Consensus 372 ~--~~~~~~~i~~aL~~AF~~~D~~l~~~-------------------~sG~TA~vvlI~ 410 (413)
. .......++++|++||.++|+.+... ..|||+++++|.
T Consensus 102 ~~~~~~~~~~~~~~l~~a~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~ 161 (337)
T 3qn1_B 102 RNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVC 161 (337)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHTSSCBCCTTCSSCBCCCSSCTTCEECEEEEEEC
T ss_pred cccccchHHHHHHHHHHHHHHhhHHHHhhhhccccccccccccccccCCCCceEEEEEEE
Confidence 0 01113478999999999999998753 359999999875
No 32
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B*
Probab=99.41 E-value=3.5e-13 Score=132.50 Aligned_cols=98 Identities=17% Similarity=0.175 Sum_probs=75.4
Q ss_pred CCcccCCCceeeeecCCCCC-------------CcceEEEEecCCChhHHHHHHhhhHHHHHHHHhhhhhhh--hhccCc
Q 015084 313 GAKKLPMEDVCYYHWPLPGV-------------DKFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKR--ERLLSQ 377 (413)
Q Consensus 313 ggrr~tMEDah~~~~~l~~~-------------~~~~~FGVFDGHGG~~aA~fas~~L~~~I~~~l~~~~~~--~~~~~~ 377 (413)
+|+|..|||+|.+.+++... ....+|||||||||..+++||++++++.|.+.+...... ......
T Consensus 17 ~G~R~~nEDa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~DG~GG~~~~~~as~~~~~~l~~~~~~~~~~~~~~~~~~ 96 (316)
T 3kdj_B 17 CGRRPEMEDAVSTIPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHGGSQVANYCRERMHLALAEEIAKEKPMLSDGDTWL 96 (316)
T ss_dssp CTTSSSCCEEEEEETTCC-----------CCGGGGCEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHHCCCGGGTHHHH
T ss_pred EeCCCCCccceeeecccccccccccccccccCCCCeEEEEEEeCCCcHHHHHHHHHHHHHHHHHHHHhhhcccccccchH
Confidence 67778999999998775432 357899999999999999999999999998865531000 000012
Q ss_pred ccHHHHHHHHHHHHHHHhccC---CCCceeEEEEEe
Q 015084 378 CDASDVLRDAFFQTEASMNHH---YEVLFHTRFLLF 410 (413)
Q Consensus 378 ~~i~~aL~~AF~~~D~~l~~~---~sG~TA~vvlI~ 410 (413)
..+.++|++||.++|+.+... ..||||++++|.
T Consensus 97 ~~~~~~l~~a~~~~~~~~~~~~~~~~GtT~~~~~i~ 132 (316)
T 3kdj_B 97 EKWKKALFNSFLRVDSEIESVAPETVGSTSVVAVVF 132 (316)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTSCTTCEECEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHhcccCCCCCCcEEEEEEE
Confidence 357899999999999999765 679999999875
No 33
>3huf_A DNA repair and telomere maintenance protein NBS1; NBS1, FHA domain, BRCT domain, phosphoprotein binding, phosp binding, DNA repair; HET: DNA TPO; 2.15A {Schizosaccharomyces pombe} PDB: 3hue_A* 3i0m_A* 3i0n_A*
Probab=99.36 E-value=1e-12 Score=129.04 Aligned_cols=96 Identities=17% Similarity=0.186 Sum_probs=75.7
Q ss_pred eEEEEEEeCCCCCeEEEeccCCCCCCcEEeCCCCCCC---eEeCCcccccceeEEEEeCC---------cceEEEEEcCC
Q 015084 177 CLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSD---VLLKDSEVSGKHALINWNPN---------KLKWELVDMGS 244 (413)
Q Consensus 177 ~~~L~vi~G~~~g~~~~L~~~~~~~~~~~IGR~~~~d---ivl~d~~VSr~HA~I~~~~~---------~~~~~L~DlgS 244 (413)
+|.|+.-.+...|+.+.|..+ .++|||...++ |.++|+.|||+||+|.++.- ...++|+|+||
T Consensus 1 MWiL~~~~d~~~Gkr~~L~pg-----~YlIGR~~~~~~~lI~idD~SISRqHA~I~v~~v~~~dg~~~~~~~l~I~DLgS 75 (325)
T 3huf_A 1 MWIIEAEGDILKGKSRILFPG-----TYIVGRNVSDDSSHIQVISKSISKRHARFTILTPSEKDYFTGGPCEFEVKDLDT 75 (325)
T ss_dssp CEEEEESTTTTTTCCEEECSE-----EEEEESSCCCBTTEEECCCTTSCSSCEEEEECCCCHHHHHHCCCCCEEEEECSC
T ss_pred CcEEeccCccCCCeEEEecCC-----eEEECCCCCccCceeecCCCCccccceEEEEecccccccccCCcceEEEEECCC
Confidence 466666433457888999887 49999998543 68899999999999998631 13699999999
Q ss_pred CCceeeCCeecCCCCCCCCCCCCceec-CCCCEEEEcceeEEE
Q 015084 245 LNGTLLNSQPINHPDSGSRHWGKPMEL-TSGDIITLGTTSSIH 286 (413)
Q Consensus 245 tNGT~VNg~~i~~~~~~~r~~g~~~~L-~~GD~I~lG~~~~~~ 286 (413)
+|||||||+++.. ..+.| .+||.|++|.....|
T Consensus 76 knGTfVNGerI~~---------~~~~L~~dgd~I~fG~~~~~f 109 (325)
T 3huf_A 76 KFGTKVNEKVVGQ---------NGDSYKEKDLKIQLGKCPFTI 109 (325)
T ss_dssp SSCEEETTEECCT---------TCEEECSSEEEEEETTCSSCE
T ss_pred CCCEEECCEECCC---------ceeeecCCCCEEEecCCcceE
Confidence 9999999999974 34555 479999999986554
No 34
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A
Probab=99.36 E-value=7.8e-13 Score=134.07 Aligned_cols=125 Identities=24% Similarity=0.276 Sum_probs=74.3
Q ss_pred CceecCCCCEEE-----EcceeEEEEeeecccccccCCccccccCchhhhcCCcccCCCceeeeecCCCCCCcceEEEEe
Q 015084 267 KPMELTSGDIIT-----LGTTSSIHVQITSETVSQIPFGVGVASDPMALRRGAKKLPMEDVCYYHWPLPGVDKFGLFGIC 341 (413)
Q Consensus 267 ~~~~L~~GD~I~-----lG~~~~~~~~~~~~~~~~~~~~v~~~~d~~~~~Rggrr~tMEDah~~~~~l~~~~~~~~FGVF 341 (413)
+...+.+||+|. .|+..+.+..-.+.+. .-...++..++ .|+|..|||++++... .....+||||
T Consensus 86 ~~l~med~d~i~~~~~q~gg~n~~~~~g~p~p~-~~~~~~g~~s~------~G~R~~NED~~~~~~~---~~~~~l~~Va 155 (389)
T 4da1_A 86 EDLDMEDNDIIEAHREQIGGENLYFQAGKPIPK-ISLENVGCASQ------IGKRKENEDRFDFAQL---TDEVLYFAVY 155 (389)
T ss_dssp ----------------------------------CCGGGCEEEEE------CTTSSSCCEEEEEEEC---SSSEEEEEEE
T ss_pred HHcCCCCCCEeeeeeccccccccceeEcCcCCc-ccceeEEEecC------CCCCCCCcceeeeeec---CCCEEEEEEE
Confidence 457789999984 3444333322211111 00112233322 4567889999987543 3456799999
Q ss_pred cCCChhHHHHHHhhhHHHHHHHHhhhhhhhhhccCcccHHHHHHHHHHHHHHHhccC----------CCCceeEEEEEe
Q 015084 342 DGHGGSAAAKSASEILPKMVAAILSDSLKRERLLSQCDASDVLRDAFFQTEASMNHH----------YEVLFHTRFLLF 410 (413)
Q Consensus 342 DGHGG~~aA~fas~~L~~~I~~~l~~~~~~~~~~~~~~i~~aL~~AF~~~D~~l~~~----------~sG~TA~vvlI~ 410 (413)
|||||..+++||++++++.|.+.+.. ..++.++|++||.++|+.+.+. ..||||++++|.
T Consensus 156 DG~GG~~~g~~as~~~~~~l~~~~~~---------~~~~~~~l~~a~~~~n~~i~~~~~~~~~~~~~~~GtT~~~~li~ 225 (389)
T 4da1_A 156 DGHGGPAAADFCHTHMEKCIMDLLPK---------EKNLETLLTLAFLEIDKAFSSHARLSADATLLTSGTTATVALLR 225 (389)
T ss_dssp EEESSTHHHHHHHHHHHHHHHHHTTT---------CCCHHHHHHHHHHHHHHHHHHHHHHSSCGGGGGCEECEEEEEEE
T ss_pred ECCCCHHHHHHHHHHHHHHHHHHhcc---------ccCHHHHHHHHHHHHHHHHHHHhhhccccccCCCCCeEEEEEEE
Confidence 99999999999999999999887654 4578899999999999998753 369999999885
No 35
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae}
Probab=99.34 E-value=1.1e-12 Score=128.28 Aligned_cols=88 Identities=22% Similarity=0.322 Sum_probs=70.8
Q ss_pred CCcccCCCceeeeecCCCCCCcceEEEEecCCChhHHHHHHhhhHHHHHHHHhhhhhhhhhccCcccHHHHHHHHHHHHH
Q 015084 313 GAKKLPMEDVCYYHWPLPGVDKFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKRERLLSQCDASDVLRDAFFQTE 392 (413)
Q Consensus 313 ggrr~tMEDah~~~~~l~~~~~~~~FGVFDGHGG~~aA~fas~~L~~~I~~~l~~~~~~~~~~~~~~i~~aL~~AF~~~D 392 (413)
.|+|..|||++++..++. ....+|||||||||..+|+||++++++.|.+.... ...++.++|++||.++|
T Consensus 31 ~G~R~~nED~~~~~~~~~--~~~~l~~V~DGhGG~~~a~~as~~~~~~l~~~~~~--------~~~~~~~~l~~a~~~~~ 100 (304)
T 2i0o_A 31 QGWRISQEDAHNCILNFD--DQCSFFAVYDGHGGAEVAQYCSLHLPTFLKTVEAY--------GRKEFEKALKEAFLGFD 100 (304)
T ss_dssp EESSSCCCEEEEEEEEEE--TTEEEEEEEECSSCSHHHHHHHHHHHHHHHHSHHH--------HTTCHHHHHHHHHHHHH
T ss_pred CCCCCCccCEEEEEeccC--CCeEEEEEEcCCCCHHHHHHHHHHHHHHHHhhhhc--------ccccHHHHHHHHHHHHH
Confidence 355688999998875542 35689999999999999999999999999765432 13468899999999999
Q ss_pred HHhcc------------------C----CCCceeEEEEEe
Q 015084 393 ASMNH------------------H----YEVLFHTRFLLF 410 (413)
Q Consensus 393 ~~l~~------------------~----~sG~TA~vvlI~ 410 (413)
+.|.+ + ..||||++++|.
T Consensus 101 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~ 140 (304)
T 2i0o_A 101 ATLLQEKVIEELKVLSGDSAGSDAEPGKDSGCTAVVALLH 140 (304)
T ss_dssp HHTTSHHHHHHHHHHHCC-----CCTTTSCEEEEEEEEEE
T ss_pred HHHHhhhhHHHHhhhccccccccccCCCCCCccEEEEEEE
Confidence 98763 1 479999999875
No 36
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae}
Probab=99.33 E-value=8.7e-13 Score=132.16 Aligned_cols=70 Identities=17% Similarity=0.228 Sum_probs=56.4
Q ss_pred CCCceeeeecCCCCCCcceEEEEecCCChhHHHHHHhhhHHHHHHH-HhhhhhhhhhccCcccHHHHHHHHHHHHHHHhc
Q 015084 318 PMEDVCYYHWPLPGVDKFGLFGICDGHGGSAAAKSASEILPKMVAA-ILSDSLKRERLLSQCDASDVLRDAFFQTEASMN 396 (413)
Q Consensus 318 tMEDah~~~~~l~~~~~~~~FGVFDGHGG~~aA~fas~~L~~~I~~-~l~~~~~~~~~~~~~~i~~aL~~AF~~~D~~l~ 396 (413)
+|||+|++.. ...+.++|||||||||..||+||+++|++.|.+ .+.. .....+++++|++||.++|+.|.
T Consensus 36 ~nED~~~~~~---~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~l~~------~~~~~~~~~~l~~a~~~~d~~i~ 106 (358)
T 2irm_A 36 ESRDKKCLCI---SDNNTSLYAILSGHNGVTVAENALQEMAAELLLGQLNV------CNTDEAVKELIRQSFMSVEKGYF 106 (358)
T ss_dssp SCCEEEEEEE---CSSSEEEEEEEEEESCSHHHHHHHHHHHHHSSSSTTTT------CCSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCceEEEEE---CCCCEEEEEEEcCCCCHHHHHHHHHHHHHHHHHhhhcc------ccchhhHHHHHHHHHHHHHHHHH
Confidence 5999998765 245678999999999999999999999999875 2221 11245789999999999999874
No 37
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A
Probab=99.31 E-value=1.4e-12 Score=135.49 Aligned_cols=98 Identities=23% Similarity=0.238 Sum_probs=71.9
Q ss_pred cCCcccCCCceeeeecCCCCCCcceEEEEecCCChhHHHHHHhhhHHHHHHHHh------hhh---hhh-----------
Q 015084 312 RGAKKLPMEDVCYYHWPLPGVDKFGLFGICDGHGGSAAAKSASEILPKMVAAIL------SDS---LKR----------- 371 (413)
Q Consensus 312 Rggrr~tMEDah~~~~~l~~~~~~~~FGVFDGHGG~~aA~fas~~L~~~I~~~l------~~~---~~~----------- 371 (413)
.++.|..|||++.+..++. ....||||||||||..||+||+++|+.+|.+.+ ... ...
T Consensus 45 ~g~~R~~nED~~~v~~~~~--~~~~lfgVfDGHGG~~aa~~as~~L~~~i~~~l~~~~~l~~~~~~~~~~~~~~~~l~~~ 122 (467)
T 2pnq_A 45 RLPANAPIEDRRSATTCLQ--TRGMLLGVFDGHAGCACSQAVSERLFYYIAVSLLPHETLLEIENAVESGRALLPILQWH 122 (467)
T ss_dssp EECCSSSCCEEEEEEEESS--SSCEEEEEEEEESSSHHHHHHHHHHHHHHHHHHCCHHHHHHHHTTTC----CCCCEEEC
T ss_pred ccCCCCCCCCceeeeeccC--CCcEEEEEECCCCCHHHHHHHHHHHHHHHHHhhcchhhhhhhhhhhhcccccccccccc
Confidence 3667788999998766543 245799999999999999999999999997542 110 000
Q ss_pred ------------------------h--hcc----CcccHHHHHHHHHHHHHHHhccC------------------CCCce
Q 015084 372 ------------------------E--RLL----SQCDASDVLRDAFFQTEASMNHH------------------YEVLF 403 (413)
Q Consensus 372 ------------------------~--~~~----~~~~i~~aL~~AF~~~D~~l~~~------------------~sG~T 403 (413)
+ ... ...++.++|++||.++|++|.+. .+|||
T Consensus 123 ~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~aL~~af~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~GtT 202 (467)
T 2pnq_A 123 KHPNDYFSKEASKLYFNGLRTYWQELIDLNTGESADIDVKEALINAFKRLDNDISLEAQVGDPNSFLNYLVLRVAFSGAT 202 (467)
T ss_dssp CCTTCCCCSTTHHHHHHHHHHHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHSEEC
T ss_pred ccccccchhhhhhhhhcchhhhhhhhccccccccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccccccccCCCCcce
Confidence 0 000 11278999999999999998642 47999
Q ss_pred eEEEEEec
Q 015084 404 HTRFLLFL 411 (413)
Q Consensus 404 A~vvlI~~ 411 (413)
|++++|..
T Consensus 203 a~v~li~~ 210 (467)
T 2pnq_A 203 ACVAHVDG 210 (467)
T ss_dssp EEEEEEET
T ss_pred EEEEEEEC
Confidence 99999863
No 38
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens}
Probab=99.30 E-value=1.6e-12 Score=127.38 Aligned_cols=98 Identities=19% Similarity=0.266 Sum_probs=71.9
Q ss_pred CCcccCCCceeeeecCCCC-CCcceEEEEecCCChhHHHHHHhhhHHHHHHHH--hhhhhhh--hhccCcccHHHHHHHH
Q 015084 313 GAKKLPMEDVCYYHWPLPG-VDKFGLFGICDGHGGSAAAKSASEILPKMVAAI--LSDSLKR--ERLLSQCDASDVLRDA 387 (413)
Q Consensus 313 ggrr~tMEDah~~~~~l~~-~~~~~~FGVFDGHGG~~aA~fas~~L~~~I~~~--l~~~~~~--~~~~~~~~i~~aL~~A 387 (413)
.|+|..|||++++..+++. .....+|||||||||..+|+||++++++.|.+. +...... ....+...+.++|++|
T Consensus 32 ~G~R~~nED~~~~~~~~~~~~~~~~l~~V~DGhGG~~~a~~as~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 111 (307)
T 2p8e_A 32 QGWRVEMEDAHTAVVGIPHGLEDWSFFAVYDGHAGSRVANYCSTHLLEHITTNEDFRAAGKSGSALELSVENVKNGIRTG 111 (307)
T ss_dssp EETSSSCCEEEEEEEEETTTEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSTTTC-----------CHHHHHHHHHHH
T ss_pred CCCCCcccceEEEEecCCCCCCCeEEEEEECCCCCHHHHHHHHHHHHHHHHhhHhhhhcccccccccccHHHHHHHHHHH
Confidence 3556889999998766543 235789999999999999999999999999752 2110000 0011234678999999
Q ss_pred HHHHHHHhccC--------CCCceeEEEEEe
Q 015084 388 FFQTEASMNHH--------YEVLFHTRFLLF 410 (413)
Q Consensus 388 F~~~D~~l~~~--------~sG~TA~vvlI~ 410 (413)
|.++|+.|.+. ..||||++++|.
T Consensus 112 ~~~~~~~i~~~~~~~~~~~~~GtT~~~~~i~ 142 (307)
T 2p8e_A 112 FLKIDEYMRNFSDLRNGMDRSGSTAVGVMIS 142 (307)
T ss_dssp HHHHHHHHHTSTTTC---CCCEECEEEEEEC
T ss_pred HHHHHHHHHhhhhhccCCCCCCCeEEEEEEE
Confidence 99999998763 469999999874
No 39
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii}
Probab=99.30 E-value=1.4e-12 Score=131.94 Aligned_cols=86 Identities=9% Similarity=0.034 Sum_probs=68.2
Q ss_pred CCcccCCCcee-----eeecCCCCCCcceEEEEecCCChhHHHHHHhhhHHHHHHHHhhhhhhhhhccCcccHHHHHHHH
Q 015084 313 GAKKLPMEDVC-----YYHWPLPGVDKFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKRERLLSQCDASDVLRDA 387 (413)
Q Consensus 313 ggrr~tMEDah-----~~~~~l~~~~~~~~FGVFDGHGG~~aA~fas~~L~~~I~~~l~~~~~~~~~~~~~~i~~aL~~A 387 (413)
.|+|.+|||+| ++...+.+..+.+||||||||||..||+||+++|++.|.+.. ....++|++|
T Consensus 21 ~G~R~~~ED~~neD~~~~~~~~~~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~------------~~~~~al~~a 88 (377)
T 3d8k_A 21 RNRRPTSESPHSDDVVVVEGMLRGRPETRVHAMFDGFQGRHSAMWLAQNVMNYLNDLR------------DVNEEEITRQ 88 (377)
T ss_dssp CEEEEEECC---CEEEEEEEECSSCTTEEEEEEEEBSSSSHHHHHHHHHHHHHHTTCS------------SSSHHHHHHH
T ss_pred cCCCCccccchhcceEEEecccCCCCCeEEEEEEcCCCcHHHHHHHHHHHHHHHHHhc------------ccHHHHHHHH
Confidence 46678898766 333345556778899999999999999999999999986422 1247899999
Q ss_pred HHHHHHHhccC--CCCceeEEEEEe
Q 015084 388 FFQTEASMNHH--YEVLFHTRFLLF 410 (413)
Q Consensus 388 F~~~D~~l~~~--~sG~TA~vvlI~ 410 (413)
|.++|+.|.+. .+||||+++++.
T Consensus 89 f~~~d~~l~~~~~~~GtTa~~~~i~ 113 (377)
T 3d8k_A 89 FERMDGDLRAANLPGGSSALIIFVR 113 (377)
T ss_dssp HHHHHHHHHHHTCCCCBCEEEEEEE
T ss_pred HHHHHHHHHhcccCCCCceEEEEEe
Confidence 99999999876 679999999885
No 40
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii}
Probab=99.29 E-value=2.8e-12 Score=125.98 Aligned_cols=97 Identities=15% Similarity=0.155 Sum_probs=71.2
Q ss_pred CCcccCCCceeeeecCC-CCCCcceEEEEecCCChhHHHHHHhhhHHHHHHHHhhhhhhh----hh-------ccCcccH
Q 015084 313 GAKKLPMEDVCYYHWPL-PGVDKFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKR----ER-------LLSQCDA 380 (413)
Q Consensus 313 ggrr~tMEDah~~~~~l-~~~~~~~~FGVFDGHGG~~aA~fas~~L~~~I~~~l~~~~~~----~~-------~~~~~~i 380 (413)
.|+|.+|||++++..+. +......+|||||||||..+++||++++++.|.+........ .. .....++
T Consensus 30 ~G~R~~nED~~~~~~~~~~~~~~~~l~~V~DGhGG~~~~~~as~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 109 (324)
T 2i44_A 30 IGGRKHQEDRFTLCPQLVPGRDDCAFFGVFDGTVGDFASENVKDLVVPQLISSPAWQEVTEMLRSDVPATEVDEKLPQLL 109 (324)
T ss_dssp CTTSSSCCEEEEEESCCSTTCSSEEEEEEEEEESSSHHHHHHHHHHHHHHHTCHHHHHHHHHHTSCCCHHHHHHHHHHHH
T ss_pred CCCCCccCCeEEEEecCCCCCCCeEEEEEeCCCCchHHHHHHHHHHHHHHHhhhHHHHHHHHhhccCCccccccccchhH
Confidence 45578899999988653 345567899999999999999999999999997632110000 00 0013467
Q ss_pred HHHHHHHHHHHHHHhccC-------CCCceeEEEEE
Q 015084 381 SDVLRDAFFQTEASMNHH-------YEVLFHTRFLL 409 (413)
Q Consensus 381 ~~aL~~AF~~~D~~l~~~-------~sG~TA~vvlI 409 (413)
.++|++||.++|+.|.+. +.|||+|+++|
T Consensus 110 ~~~l~~a~~~~~~~i~~~~~~~~~~~~g~gtt~~~i 145 (324)
T 2i44_A 110 DQAVDDMYKNADNELVKMCEQLNKDYASSTSVTAVL 145 (324)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCSSCEECEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEE
Confidence 899999999999998643 56888888875
No 41
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A
Probab=99.27 E-value=1.8e-12 Score=132.13 Aligned_cols=72 Identities=24% Similarity=0.262 Sum_probs=55.6
Q ss_pred ccCCCceeeeecCCCCCCcceEEEEecCCChhHHHHHHhhhHHHHHHHH-hhhhhhhhhccCcccHHHHHHHHHHHHHHH
Q 015084 316 KLPMEDVCYYHWPLPGVDKFGLFGICDGHGGSAAAKSASEILPKMVAAI-LSDSLKRERLLSQCDASDVLRDAFFQTEAS 394 (413)
Q Consensus 316 r~tMEDah~~~~~l~~~~~~~~FGVFDGHGG~~aA~fas~~L~~~I~~~-l~~~~~~~~~~~~~~i~~aL~~AF~~~D~~ 394 (413)
|.+|||+|++.. .....+||||||||||..||+||+++|++.|.+. +.. . ....++.++|++||.++|+.
T Consensus 46 r~~nED~~~~~~---~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~~~~----~--~~~~~~~~~l~~af~~~~~~ 116 (401)
T 2j4o_A 46 SHPPEDSWLKFR---SENNCFLYGVFNGYDGNRVTNFVAQRLSAELLLGQLNA----E--HAEADVRRVLLQAFDVVERS 116 (401)
T ss_dssp CCCCCEEEEEEE---ETTTEEEEEEEEEESSSHHHHHHHHHHHHTTSSSSCCT----T--SCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCceEEEec---CCCCeEEEEEEcCCCCHHHHHHHHHHHHHHHHHhhhhc----c--cchhhHHHHHHHHHHHHHHH
Confidence 447999998754 2455789999999999999999999999988642 211 0 12347889999999999887
Q ss_pred hc
Q 015084 395 MN 396 (413)
Q Consensus 395 l~ 396 (413)
|.
T Consensus 117 i~ 118 (401)
T 2j4o_A 117 FL 118 (401)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 42
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens}
Probab=99.26 E-value=9.8e-12 Score=119.57 Aligned_cols=86 Identities=26% Similarity=0.306 Sum_probs=70.7
Q ss_pred CCcccCCCceeeeecCCCCCCcceEEEEecCCChhHHHHHHhhhHHHHHHHHhhhhhhhhhccCcccHHHHHHHHHHHHH
Q 015084 313 GAKKLPMEDVCYYHWPLPGVDKFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKRERLLSQCDASDVLRDAFFQTE 392 (413)
Q Consensus 313 ggrr~tMEDah~~~~~l~~~~~~~~FGVFDGHGG~~aA~fas~~L~~~I~~~l~~~~~~~~~~~~~~i~~aL~~AF~~~D 392 (413)
.|+|..|||++.+... ..+..+|||||||||..+|+||++.+++.|.+.+.. ..+++++|++||.++|
T Consensus 16 ~G~R~~nED~~~~~~~---~~~~~l~~V~DG~GG~~~a~~as~~~~~~l~~~~~~---------~~~~~~~l~~a~~~~~ 83 (274)
T 2iq1_A 16 IGKRKENEDRFDFAQL---TDEVLYFAVYDGHGGPAAADFCHTHMEKCIMDLLPK---------EKNLETLLTLAFLEID 83 (274)
T ss_dssp CCSSSSCCEEEEEEEC---SSSEEEEEEEEEESSTHHHHHHHHHHHHHHHHHTTT---------CCCHHHHHHHHHHHHH
T ss_pred ccCCCCccceEEEeeC---CCCeEEEEEECCCCCHHHHHHHHHHHHHHHHHHhcc---------cccHHHHHHHHHHHHH
Confidence 3557889999987642 245689999999999999999999999999876543 4578899999999999
Q ss_pred HHhccC----------CCCceeEEEEEe
Q 015084 393 ASMNHH----------YEVLFHTRFLLF 410 (413)
Q Consensus 393 ~~l~~~----------~sG~TA~vvlI~ 410 (413)
+.|.+. ..||||++++|.
T Consensus 84 ~~i~~~~~~~~~~~~~~~GtT~~~~~i~ 111 (274)
T 2iq1_A 84 KAFSSHARLSADATLLTSGTTATVALLR 111 (274)
T ss_dssp HHHHHHHHC---CCGGGCEECEEEEEEE
T ss_pred HHHHHHhhhccccCCCCCCCcEEEEEEE
Confidence 998642 469999998875
No 43
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A
Probab=99.25 E-value=2.9e-12 Score=129.84 Aligned_cols=97 Identities=21% Similarity=0.234 Sum_probs=72.5
Q ss_pred CCcccCCCceeeeecCCCC-CCcceEEEEecCCChhHHHHHHhhhHHHHHHHHhhhhhhhhhccCcccHHHHHHHHHHHH
Q 015084 313 GAKKLPMEDVCYYHWPLPG-VDKFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKRERLLSQCDASDVLRDAFFQT 391 (413)
Q Consensus 313 ggrr~tMEDah~~~~~l~~-~~~~~~FGVFDGHGG~~aA~fas~~L~~~I~~~l~~~~~~~~~~~~~~i~~aL~~AF~~~ 391 (413)
.|+|..|||+|++..++++ .....+|||||||||..+|+||++++++.|.+...... .....+...+.++|++||.++
T Consensus 30 ~G~R~~nEDa~~~~~~~~~~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~~~~~-~~~~~~~~~~~~~l~~af~~~ 108 (382)
T 1a6q_A 30 QGWRVEMEDAHTAVIGLPSGLESWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKG-SAGAPSVENVKNGIRTGFLEI 108 (382)
T ss_dssp EETSSSCCEEEEEEEEETTTEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSHHHHC-SSSSCCHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCceeEEecCCCCCCCCeEEEEEEcCCCcHHHHHHHHHHHHHHHHhhhhhhc-cCCCCCHHHHHHHHHHHHHHH
Confidence 3456889999998776543 23578999999999999999999999999975221100 000112346789999999999
Q ss_pred HHHhccC--------CCCceeEEEEEe
Q 015084 392 EASMNHH--------YEVLFHTRFLLF 410 (413)
Q Consensus 392 D~~l~~~--------~sG~TA~vvlI~ 410 (413)
|+.|.+. .+||||++++|.
T Consensus 109 n~~i~~~~~~~~~~~~~GtT~~~~li~ 135 (382)
T 1a6q_A 109 DEHMRVMSEKKHGADRSGSTAVGVLIS 135 (382)
T ss_dssp HHHHHHHHHHTTCCCCCEECEEEEEEC
T ss_pred HHHHHhhhhhccCCCCCcceEEEEEEE
Confidence 9998742 579999999875
No 44
>3kt9_A Aprataxin; FHA domain, beta sandwich, beta sheet, AMP hydrolase, alternative splicing, disease mutation, DNA damage, DNA repair, DNA-binding; 1.65A {Homo sapiens} SCOP: b.26.1.0
Probab=99.19 E-value=1.6e-10 Score=96.47 Aligned_cols=94 Identities=16% Similarity=0.202 Sum_probs=78.5
Q ss_pred eEEEEEEeCCCCCeEEEeccCCCCCCcEEeCCCCCCCeEeCCcccccceeEEEEeCCcceEEEEEcCCCCceeeCCeecC
Q 015084 177 CLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQPIN 256 (413)
Q Consensus 177 ~~~L~vi~G~~~g~~~~L~~~~~~~~~~~IGR~~~~divl~d~~VSr~HA~I~~~~~~~~~~L~DlgStNGT~VNg~~i~ 256 (413)
..+|+..++. ...+.|..+. +++|||++.+.| .|..+||+|++|..+.+++.+.|.++| +|+++|||+++.
T Consensus 4 ~c~L~~~~~~--~~~I~L~~g~----~v~iGR~p~t~I--~DkrcSR~h~~L~~~~~~g~v~vk~lg-~Np~~vng~~l~ 74 (102)
T 3kt9_A 4 VCWLVRQDSR--HQRIRLPHLE----AVVIGRGPETKI--TDKKCSRQQVQLKAECNKGYVKVKQVG-VNPTSIDSVVIG 74 (102)
T ss_dssp EEEEEETTST--TCEEECCBTC----EEEECSSTTTCC--CCTTSCSSCEEEEEETTTTEEEEEECS-SSCCEETTEECC
T ss_pred eEEEEecCCC--CCcEEcCCCC----cEEeccCCcccc--ccCcccCcceEEEEecCCCEEEEEECc-CCCCeECCEEcC
Confidence 3566666654 3578888885 478999998855 699999999999999866788999995 999999999999
Q ss_pred CCCCCCCCCCCceecCCCCEEEEcceeEEEE
Q 015084 257 HPDSGSRHWGKPMELTSGDIITLGTTSSIHV 287 (413)
Q Consensus 257 ~~~~~~r~~g~~~~L~~GD~I~lG~~~~~~~ 287 (413)
+ ++.+.|++||+|.+-...+.|.
T Consensus 75 k--------~~~~~L~~GD~l~Ll~~~~~~~ 97 (102)
T 3kt9_A 75 K--------DQEVKLQPGQVLHMVNELYPYI 97 (102)
T ss_dssp B--------TCEEEECTTCCEEEETTEEEEE
T ss_pred C--------CCeEEeCCCCEEEEccCCceEE
Confidence 8 7889999999999988876664
No 45
>3uv0_A Mutator 2, isoform B; FHA, protein binding, dimerization; 1.90A {Drosophila melanogaster}
Probab=99.19 E-value=4.1e-11 Score=99.06 Aligned_cols=77 Identities=13% Similarity=0.146 Sum_probs=63.2
Q ss_pred EEEeccCCCCCCcEEeCCCCCCCeEeCCcccccceeEEEEeCCcceEEEEEcCCCCc-eeeCCeecCCCCCCCCCCCCce
Q 015084 191 RCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNG-TLLNSQPINHPDSGSRHWGKPM 269 (413)
Q Consensus 191 ~~~L~~~~~~~~~~~IGR~~~~divl~d~~VSr~HA~I~~~~~~~~~~L~DlgStNG-T~VNg~~i~~~~~~~r~~g~~~ 269 (413)
...|+.+. -++|||.+.|++.|+|+.||+.||.|....+ + .++. . |+|| +||||+++.. .
T Consensus 14 ~v~l~~~~----~~rIGR~~~~~l~LddpsVs~~HAti~~~~~-G-~~~l-~-S~nGtVFVNGqrv~~-----------~ 74 (102)
T 3uv0_A 14 AILLKADT----IYRIGRQKGLEISIADESMELAHATACILRR-G-VVRL-A-ALVGKIFVNDQEETV-----------V 74 (102)
T ss_dssp CEECCTTC----CEEEESSTTSTEECCCTTSCTTCEEEEEEET-T-EEEE-E-ESSSCEEETTEEESE-----------E
T ss_pred cEEeecCc----EEEEcCCCCCcEEECCcccccceEEEEecCC-c-eEEE-E-eccCcEEECCEEeee-----------E
Confidence 45566665 4999999999999999999999999998876 2 4443 3 9999 5999999943 9
Q ss_pred ecCCCCE------EEEcceeEEE
Q 015084 270 ELTSGDI------ITLGTTSSIH 286 (413)
Q Consensus 270 ~L~~GD~------I~lG~~~~~~ 286 (413)
.|..||. ++||+.+-.+
T Consensus 75 ~I~~gDtI~g~v~lrFGnvea~l 97 (102)
T 3uv0_A 75 DIGMENAVAGKVKLRFGNVEARL 97 (102)
T ss_dssp EECGGGCBTTEEEEEETTEEEEE
T ss_pred EccCCcccccEEEEEecCEEEEE
Confidence 9999999 7888876443
No 46
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=99.12 E-value=9.2e-11 Score=118.73 Aligned_cols=94 Identities=19% Similarity=0.163 Sum_probs=76.6
Q ss_pred ceEEEEEEeCCCCCeEEEeccCCCCCCcEEeCCCCCCCeEeCCccc---------ccceeEEEEeCCc---ceEEEEEcC
Q 015084 176 SCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEV---------SGKHALINWNPNK---LKWELVDMG 243 (413)
Q Consensus 176 ~~~~L~vi~G~~~g~~~~L~~~~~~~~~~~IGR~~~~divl~d~~V---------Sr~HA~I~~~~~~---~~~~L~Dlg 243 (413)
.+..|.++..... .+.+..+ .++|||.+.||++++|+.| |++||+|++..+. ..|+|+| +
T Consensus 9 ~~g~l~~~~~~~~--~~~l~~~-----~~~iGR~~~~~~~~~~~~~~~~~~~~~vS~~H~~i~~~~~~~~~~~~~i~D-~ 80 (419)
T 3i6u_A 9 PWARLWALQDGFA--NLECVND-----NYWFGRDKSCEYCFDEPLLKRTDKYRTYSKKHFRIFREVGPKNSYIAYIED-H 80 (419)
T ss_dssp CSEEEEECSSSSC--CEEECSS-----EEEEESSTTSSEETTCTTGGGCSGGGGSCTTCEEEECCEETTTEECCEEEE-C
T ss_pred CceEeeecCCCCC--ceEecCC-----CEEecCCCccCEEECCcccccccccccccccceEEEEEcCCCCceEEEEEE-C
Confidence 5778877765433 5777766 5899999999999999865 9999999865321 2399999 6
Q ss_pred CCCceeeCCeecCCCCCCCCCCCCceecCCCCEEEEcceeEE
Q 015084 244 SLNGTLLNSQPINHPDSGSRHWGKPMELTSGDIITLGTTSSI 285 (413)
Q Consensus 244 StNGT~VNg~~i~~~~~~~r~~g~~~~L~~GD~I~lG~~~~~ 285 (413)
|+|||||||+++.+ +....|.+||.|.+|.+...
T Consensus 81 S~nGt~vn~~~~~~--------~~~~~l~~~d~i~~~~~~~~ 114 (419)
T 3i6u_A 81 SGNGTFVNTELVGK--------GKRRPLNNNSEIALSLSRNK 114 (419)
T ss_dssp CSSCEEETTEECCT--------TCEEECCTTEEEEESSTTCE
T ss_pred CcCCceECcccccC--------CCcccCCCCCEeeeeccccc
Confidence 99999999999987 56789999999999987644
No 47
>2brf_A Bifunctional polynucleotide phosphatase/kinase; hydrolase/transferase, FHA, forkhead-associated, PNKP, PNK, polynucleotide kinase 3' phosphatase; 1.40A {Homo sapiens} SCOP: b.26.1.2 PDB: 2w3o_A* 1yjm_A*
Probab=99.06 E-value=6.4e-10 Score=93.95 Aligned_cols=90 Identities=20% Similarity=0.221 Sum_probs=73.1
Q ss_pred CceEEEEEEeCCCCCeEEEec--cCCCCCCcEEeCCCCCCCeEeCCcccccceeEEEEeCCcceEEEEEcCCCCceeeCC
Q 015084 175 RSCLSLEVVSGPSRGIRCSVQ--SANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNS 252 (413)
Q Consensus 175 ~~~~~L~vi~G~~~g~~~~L~--~~~~~~~~~~IGR~~~~divl~d~~VSr~HA~I~~~~~~~~~~L~DlgStNGT~VNg 252 (413)
+...+|+.+++... .+.|. .+ +.+|||++.. .+.|..+||+|+++.++..++.+.+.++ ++|++++||
T Consensus 7 ~~~c~L~~~~~~~~--~I~Lp~~~g-----~~viGR~p~t--~I~DkrcSR~hv~L~ad~~~~~v~vk~l-G~Np~~vng 76 (110)
T 2brf_A 7 PGRLWLESPPGEAP--PIFLPSDGQ-----ALVLGRGPLT--QVTDRKCSRTQVELVADPETRTVAVKQL-GVNPSTTGT 76 (110)
T ss_dssp -CEEEEECSTTSSC--CEECCSTTC-----CEEECSBTTT--TBCCTTSCSSCEEEEEETTTTEEEEEEC-SSSCCEEC-
T ss_pred CcEEEEEeCCCCCC--cEEeccCCC-----CEEEcCCCCc--ccccccceeeeEEEEEecCCCEEEEEEc-ccCCcEECC
Confidence 35677877776643 67784 34 5899999954 4679999999999999988778999999 589999999
Q ss_pred eecCCCCCCCCCCCCceecCCCCEEEEcce
Q 015084 253 QPINHPDSGSRHWGKPMELTSGDIITLGTT 282 (413)
Q Consensus 253 ~~i~~~~~~~r~~g~~~~L~~GD~I~lG~~ 282 (413)
+++.+ ++.+.|++||+|.|=..
T Consensus 77 ~~l~k--------~~~~~L~~GD~leLl~g 98 (110)
T 2brf_A 77 QELKP--------GLEGSLGVGDTLYLVNG 98 (110)
T ss_dssp CBCCT--------TCEEEEETTCEEEEETT
T ss_pred EEcCC--------CCEEEecCCCEEEEccC
Confidence 99998 78899999999998433
No 48
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A
Probab=99.04 E-value=2.2e-10 Score=106.96 Aligned_cols=83 Identities=23% Similarity=0.205 Sum_probs=65.9
Q ss_pred CC-cccCCCceeeeecCCCCCCcceEEEEecCCChhHHHHHHhhhHHHHHHHHhhhhhhhhhccCcccHHHHHHHHHHHH
Q 015084 313 GA-KKLPMEDVCYYHWPLPGVDKFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKRERLLSQCDASDVLRDAFFQT 391 (413)
Q Consensus 313 gg-rr~tMEDah~~~~~l~~~~~~~~FGVFDGHGG~~aA~fas~~L~~~I~~~l~~~~~~~~~~~~~~i~~aL~~AF~~~ 391 (413)
.| .|..|||++++ ...+|||||||||..+++++++.+.+.+.+.+.. ....++.++|++||.++
T Consensus 13 ~G~~r~~nED~~~~--------~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~-------~~~~~~~~~l~~a~~~~ 77 (237)
T 1txo_A 13 RGLVRANNEDSVYA--------GARLLALADGMGGHAAGEVASQLVIAALAHLDDD-------EPGGDLLAKLDAAVRAG 77 (237)
T ss_dssp CCSSCSSCCEEEEE--------CSSEEEEEEEECTTTHHHHHHHHHHHHHGGGGSS-------CCCSCHHHHHHHHHHHH
T ss_pred CCCCCCcCCCcccc--------CCCEEEEEeCCCCcHHHHHHHHHHHHHHHHHhhh-------CCchhHHHHHHHHHHHH
Confidence 34 37789999975 2359999999999999999999999998765432 12347889999999999
Q ss_pred HHHhccC--------CCCceeEEEEEe
Q 015084 392 EASMNHH--------YEVLFHTRFLLF 410 (413)
Q Consensus 392 D~~l~~~--------~sG~TA~vvlI~ 410 (413)
++.+.+. ..|||++++++-
T Consensus 78 ~~~i~~~~~~~~~~~~~gtT~~~~~i~ 104 (237)
T 1txo_A 78 NSAIAAQVEMEPDLEGMGTTLTAILFA 104 (237)
T ss_dssp HHHHHHHHHHCGGGTTCEECEEEEEEE
T ss_pred HHHHHHHHhhCCCCCCCcceEEEEEEE
Confidence 9988653 368999888764
No 49
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae}
Probab=98.97 E-value=7.5e-10 Score=104.09 Aligned_cols=90 Identities=12% Similarity=0.017 Sum_probs=69.6
Q ss_pred CCc-ccCCCceeeeecCCCCCCcceEEEEecCCChhHHHHHHhhhHHHHHH-HHhhhhhhhhhccCcccHHHHHHHHHHH
Q 015084 313 GAK-KLPMEDVCYYHWPLPGVDKFGLFGICDGHGGSAAAKSASEILPKMVA-AILSDSLKRERLLSQCDASDVLRDAFFQ 390 (413)
Q Consensus 313 ggr-r~tMEDah~~~~~l~~~~~~~~FGVFDGHGG~~aA~fas~~L~~~I~-~~l~~~~~~~~~~~~~~i~~aL~~AF~~ 390 (413)
.|+ |..|||++.+.... ....+|+|||||||..+++++++.+.+.+. +.+... ......+.++|+++|.+
T Consensus 14 ~G~~r~~neD~~~~~~~~---~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~-----~~~~~~~~~~l~~~~~~ 85 (250)
T 2pk0_A 14 IGQRRSNNQDFINQFENK---AGVPLIILADGMGGHRAGNIASEMTVTDLGSDWAETD-----FSELSEIRDWMLVSIET 85 (250)
T ss_dssp CCTTCSCCCEEEEEEECT---TCCEEEEEEEEECTTTHHHHHHHHHHHHHHHHHTTCC-----CCSHHHHHHHHHHHHHH
T ss_pred CCCCCCcCCCceEeccCC---CCcEEEEEEeCCCCcHHHHHHHHHHHHHHHHHHhhcc-----cCChhhHHHHHHHHHHH
Confidence 344 78899999887653 345799999999999999999999999998 433220 00134678899999999
Q ss_pred HHHHhccC-------CCCceeEEEEEe
Q 015084 391 TEASMNHH-------YEVLFHTRFLLF 410 (413)
Q Consensus 391 ~D~~l~~~-------~sG~TA~vvlI~ 410 (413)
+|+.+.+. ..|||+++++|.
T Consensus 86 ~~~~l~~~~~~~~~~~~gtT~~~~~i~ 112 (250)
T 2pk0_A 86 ENRKIYELGQSDDYKGMGTTIEAVAIV 112 (250)
T ss_dssp HHHHHHHHHHHTTCTTCEECEEEEEEE
T ss_pred HHHHHHHHHhhCCCCCCcceEEEEEEE
Confidence 99998764 368999998874
No 50
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A
Probab=98.92 E-value=2e-09 Score=100.39 Aligned_cols=89 Identities=22% Similarity=0.254 Sum_probs=63.8
Q ss_pred CCc-ccCCCceeeeecCCCCCCcceEEEEecCCChhHHHHHHhhhHHHHHHHHhhhhhhhhhccCcccHHHHHHHHHHHH
Q 015084 313 GAK-KLPMEDVCYYHWPLPGVDKFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKRERLLSQCDASDVLRDAFFQT 391 (413)
Q Consensus 313 ggr-r~tMEDah~~~~~l~~~~~~~~FGVFDGHGG~~aA~fas~~L~~~I~~~l~~~~~~~~~~~~~~i~~aL~~AF~~~ 391 (413)
.|+ |..|||++ +..+- ... +|+|||||||..+++++++.+.+.+.+.+...... ....+.++|+++|.++
T Consensus 9 ~G~~r~~neD~~-~~~~~---~~~-~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~----~~~~~~~~l~~~~~~~ 79 (240)
T 2j82_A 9 CGLIRKSNQDAF-YIDEK---HQR-FFIVADGMGGHAGGEEASRLAVDHIRQYLETHLED----LQHDPVTLLRQAFLAA 79 (240)
T ss_dssp CCSSCSSCCEEE-EECTT---TCC-EEEEEEBC---CHHHHHHHHHHHHHHHHHHHHHHH----HTTSHHHHHHHHHHHH
T ss_pred CCCCCCcCCCcc-EecCC---CCe-EEEEEcCCCCchHHHHHHHHHHHHHHHHHHhcccc----cchhHHHHHHHHHHHH
Confidence 344 78899999 65431 234 99999999999999999999988887655431100 0336789999999999
Q ss_pred HHHhccC--------CCCceeEEEEEe
Q 015084 392 EASMNHH--------YEVLFHTRFLLF 410 (413)
Q Consensus 392 D~~l~~~--------~sG~TA~vvlI~ 410 (413)
|+.+.+. ..|||+++++|.
T Consensus 80 ~~~l~~~~~~~~~~~~~gtT~~~~~i~ 106 (240)
T 2j82_A 80 NHAIVEQQRQNSARADMGTTAVVILLD 106 (240)
T ss_dssp HHHHHHHHTTSCSCTTCCBCEEEEEEC
T ss_pred HHHHHHHhhcccCCCCCCceEEEEEEE
Confidence 9998754 259999998875
No 51
>1yj5_C 5' polynucleotide kinase-3' phosphatase FHA domai; beta sandwich, P-loop, transferase; 2.80A {Mus musculus} SCOP: b.26.1.2
Probab=98.87 E-value=5.3e-09 Score=91.66 Aligned_cols=95 Identities=19% Similarity=0.243 Sum_probs=76.4
Q ss_pred CceEEEEEEeCCCCCeEEEec--cCCCCCCcEEeCCCCCCCeEeCCcccccceeEEEEeCCcceEEEEEcCCCCceeeCC
Q 015084 175 RSCLSLEVVSGPSRGIRCSVQ--SANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNS 252 (413)
Q Consensus 175 ~~~~~L~vi~G~~~g~~~~L~--~~~~~~~~~~IGR~~~~divl~d~~VSr~HA~I~~~~~~~~~~L~DlgStNGT~VNg 252 (413)
+...+|+.+++... .+.|. .+ +++|||++.. .|.|..+||+|+.+.++..++.+.|.++ ++|+++|||
T Consensus 7 ~~~c~L~p~d~~~~--~I~Lp~~~g-----~vvIGRgPet--~ItDkRcSR~qv~L~ad~~~g~V~Vk~l-G~NP~~vng 76 (143)
T 1yj5_C 7 RGRLWLQSPTGGPP--PIFLPSDGQ-----ALVLGRGPLT--QVTDRKCSRNQVELIADPESRTVAVKQL-GVNPSTVGV 76 (143)
T ss_dssp CEEEEEECCTTSCC--CEECCTTTC-----EEEECSBTTT--TBCCSSSCSSCEEEEEETTTTEEEEEEC-SSSCCEETT
T ss_pred CCeEEEEecCCCCC--cEEeccCCC-----CEEEcCCCcc--ccccccccceeEEEEEecCCCeEEEEEc-ccCCcEECC
Confidence 35678888876643 67774 34 6899999944 5779999999999999987778999999 489999999
Q ss_pred eecCCCCCCCCCCCCceecCCCCEEEE--cceeEEEE
Q 015084 253 QPINHPDSGSRHWGKPMELTSGDIITL--GTTSSIHV 287 (413)
Q Consensus 253 ~~i~~~~~~~r~~g~~~~L~~GD~I~l--G~~~~~~~ 287 (413)
..+.+ ++.+.|++||+|.| |...+.++
T Consensus 77 ~~L~k--------~~~~~L~~GD~LeLl~g~y~f~V~ 105 (143)
T 1yj5_C 77 HELKP--------GLSGSLSLGDVLYLVNGLYPLTLR 105 (143)
T ss_dssp EECCT--------TCEEEECTTCEEESSSSCSEEEEE
T ss_pred EEecC--------CCEEEecCCCEEEEecCCceEEEE
Confidence 99998 78899999999985 44444433
No 52
>1ujx_A Polynucleotide kinase 3'-phosphatase; DNA repair, FHA domain, beta-sandwich, antiparallel beta-sheets, phosphopeptide binding motif; NMR {Mus musculus} SCOP: b.26.1.2
Probab=98.82 E-value=2.6e-09 Score=91.30 Aligned_cols=87 Identities=22% Similarity=0.305 Sum_probs=72.7
Q ss_pred CceEEEEEEeCCCCCeEEEec--cCCCCCCcEEeCCCCCCCeEeCCcccccceeEEEEeCCcceEEEEEcCCCCceeeCC
Q 015084 175 RSCLSLEVVSGPSRGIRCSVQ--SANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNS 252 (413)
Q Consensus 175 ~~~~~L~vi~G~~~g~~~~L~--~~~~~~~~~~IGR~~~~divl~d~~VSr~HA~I~~~~~~~~~~L~DlgStNGT~VNg 252 (413)
+...+|+.+++... .+.|. .+ +++|||.+.. .+.|..+||+|+++.++..++.+.+.++| +|+|+|||
T Consensus 14 ~~~c~L~~~~~~~~--~I~Lp~~~g-----~~viGRgp~t--~I~DkrcSR~qv~L~ad~~~~~v~vk~lG-~NP~~vng 83 (119)
T 1ujx_A 14 RGRLWLQSPTGGPP--PIFLPSDGQ-----ALVLGRGPLT--QVTDRKCSRNQVELIADPESRTVAVKQLG-VNPSTVGV 83 (119)
T ss_dssp CCCEEEECCSSSCC--CCCCCTTSC-----CEEESBBTTT--TBCCTTSCTTSEEEEEETTTTEEEEEECS-SSCCBSSS
T ss_pred cceEEEEeCCCCCC--cEEeccCCC-----CEEEcCCCCc--ccccccccceeEEEEEecCCCEEEEEEcc-cCCcEECC
Confidence 45788888876643 56664 33 6899999944 56899999999999999887789999995 89999999
Q ss_pred eecCCCCCCCCCCCCceecCCCCEEEE
Q 015084 253 QPINHPDSGSRHWGKPMELTSGDIITL 279 (413)
Q Consensus 253 ~~i~~~~~~~r~~g~~~~L~~GD~I~l 279 (413)
+++.+ ++.+.|++||+|.|
T Consensus 84 ~~l~k--------~~~~~L~~GD~l~L 102 (119)
T 1ujx_A 84 QELKP--------GLSGSLSLGDVLYL 102 (119)
T ss_dssp SBCCT--------TCEEEEETTCCCBC
T ss_pred EEecC--------CCEEEecCCCEEEE
Confidence 99998 78899999999985
No 53
>4egx_A Kinesin-like protein KIF1A; FHA domain, transport protein; 2.51A {Homo sapiens}
Probab=98.81 E-value=2.2e-08 Score=91.86 Aligned_cols=92 Identities=17% Similarity=0.243 Sum_probs=72.4
Q ss_pred eEEEEEEeC-CCC-C-eEEEeccCCCCCCcEEeCCCC---CCCeEeCCcccccceeEEEEeCCc---ceEEEEEcCCCCc
Q 015084 177 CLSLEVVSG-PSR-G-IRCSVQSANASRLPLTLGRVS---PSDVLLKDSEVSGKHALINWNPNK---LKWELVDMGSLNG 247 (413)
Q Consensus 177 ~~~L~vi~G-~~~-g-~~~~L~~~~~~~~~~~IGR~~---~~divl~d~~VSr~HA~I~~~~~~---~~~~L~DlgStNG 247 (413)
...|.-++. |.. + ..|.|..+. .+|||.. .|||+|.++.|++.||.|..+.++ +.++|... +.+.
T Consensus 68 ~PhLvnLn~Dp~ls~~l~y~L~~g~-----t~VGr~~~~~~~dI~L~G~~I~~~Hc~i~~~~~~~~~~~vtl~p~-~~a~ 141 (184)
T 4egx_A 68 TPHLVNLNEDPLMSECLLYYIKDGI-----TRVGREDGERRQDIVLSGHFIKEEHCVFRSDSRGGSEAVVTLEPC-EGAD 141 (184)
T ss_dssp SCEEEECCCCTTCSSCSEEECCSEE-----EEEECSSSSSCCSEECCSTTCCSEEEEEEEECCSSCSCEEEEEEC-TTCC
T ss_pred CceEEeccCCcccCceEEEEECCCc-----CcCCCCCcCCCCeEEECccccccccEEEEEcCCCCceEEEEEeeC-CCCe
Confidence 345666533 332 2 478888874 6999965 699999999999999999987642 35788886 6788
Q ss_pred eeeCCeecCCCCCCCCCCCCceecCCCCEEEEcceeE
Q 015084 248 TLLNSQPINHPDSGSRHWGKPMELTSGDIITLGTTSS 284 (413)
Q Consensus 248 T~VNg~~i~~~~~~~r~~g~~~~L~~GD~I~lG~~~~ 284 (413)
|||||++|.. ++.|++||+|.||...+
T Consensus 142 t~VNG~~I~~----------~~~L~~GDrI~lG~~h~ 168 (184)
T 4egx_A 142 TYVNGKKVTE----------PSILRSGNRIIMGKSHV 168 (184)
T ss_dssp EEETTEECCS----------CEECCTTCEEEETTTEE
T ss_pred EEEcCEEccc----------cEEcCCCCEEEECCCCE
Confidence 9999999985 59999999999998863
No 54
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A
Probab=98.72 E-value=1.3e-08 Score=94.58 Aligned_cols=73 Identities=25% Similarity=0.248 Sum_probs=57.9
Q ss_pred ccCCCceeeeecCCCCCCcceEEEEecCCChh--HHHHHHhhhHHHHHHHHhhhhhhhhhccCcccHHHHHHHHHHHHHH
Q 015084 316 KLPMEDVCYYHWPLPGVDKFGLFGICDGHGGS--AAAKSASEILPKMVAAILSDSLKRERLLSQCDASDVLRDAFFQTEA 393 (413)
Q Consensus 316 r~tMEDah~~~~~l~~~~~~~~FGVFDGHGG~--~aA~fas~~L~~~I~~~l~~~~~~~~~~~~~~i~~aL~~AF~~~D~ 393 (413)
|..|||++++ ...+|+|||||||. .||+++.+.|.+.+... . + .+.|+++|.++++
T Consensus 18 r~~neD~~~~--------~~~~~~V~DG~Gg~G~~as~~~~~~l~~~~~~~------------~-~-~~~l~~~~~~~~~ 75 (234)
T 2jfr_A 18 RENNQDACLA--------DGILYAVADGFGARGHHASATALKTLSAGFAAA------------P-D-RDGLLEAVQQANL 75 (234)
T ss_dssp CSSCCEEEEE--------ETTEEEEEEEESTTHHHHHHHHHHHHHHHHHHS------------C-S-HHHHHHHHHHHHH
T ss_pred CCcCCCccee--------CCcEEEEEeCCCccHHHHHHHHHHHHHHHHhcC------------C-c-HHHHHHHHHHHHH
Confidence 7889999965 34699999999965 88999999888765431 1 2 6789999999999
Q ss_pred HhccC------CCCceeEEEEEe
Q 015084 394 SMNHH------YEVLFHTRFLLF 410 (413)
Q Consensus 394 ~l~~~------~sG~TA~vvlI~ 410 (413)
.+.+. +.|||+++++|.
T Consensus 76 ~l~~~~~~~~~~~gtT~~~~~i~ 98 (234)
T 2jfr_A 76 RVFELLGDEPTVSGTTLTAVAVF 98 (234)
T ss_dssp HHHHHHTTSSSCCEECEEEEECC
T ss_pred HHHHhhccCCCCCCccEEEEEEE
Confidence 88764 279999998874
No 55
>1wv3_A Similar to DNA segregation ATPase and related proteins; structural genomics, unknown function; 1.75A {Staphylococcus aureus subsp} SCOP: b.26.1.4 b.26.1.4
Probab=98.69 E-value=2.1e-08 Score=95.54 Aligned_cols=74 Identities=14% Similarity=0.029 Sum_probs=61.8
Q ss_pred cEEeCCCCCCCeEeCCcccccceeEEEEeC-Cc-ceEEEEEcCCCCce-eeCCeecCCCCCCCCCCCCceecC-CCCEEE
Q 015084 203 PLTLGRVSPSDVLLKDSEVSGKHALINWNP-NK-LKWELVDMGSLNGT-LLNSQPINHPDSGSRHWGKPMELT-SGDIIT 278 (413)
Q Consensus 203 ~~~IGR~~~~divl~d~~VSr~HA~I~~~~-~~-~~~~L~DlgStNGT-~VNg~~i~~~~~~~r~~g~~~~L~-~GD~I~ 278 (413)
.++|||.+.|||+|++. + ||.+..+. .+ +.|+|+|++|+||| ||||+++.. +..|+ .||.|.
T Consensus 93 ~itIG~~~~~dI~l~~~-~---~~~~~~~~~~~~~~~~l~~l~s~ngtvyvNg~~i~~----------~~~L~~~GD~I~ 158 (238)
T 1wv3_A 93 TMTIGPNAYDDMVIQSL-M---NAIIIKDFQSIQESQYVRIVHDKNTDVYINYELQEQ----------LTNKAYIGDHIY 158 (238)
T ss_dssp EEEEESSTTSSEECTTC-S---SCEEEECGGGHHHHCEEEEECCTTCCEEETTEECCS----------SEEEEETTCEEE
T ss_pred eEEEeCCCCCeEEeCCC-e---eEEEEecccCcCCcEEEEEccCCCCCEEECCEEecc----------ceeccCCcCEEE
Confidence 69999999999999988 3 58776661 10 26999999999996 999999985 37899 999999
Q ss_pred EcceeEEEEeee
Q 015084 279 LGTTSSIHVQIT 290 (413)
Q Consensus 279 lG~~~~~~~~~~ 290 (413)
+|+..+.+....
T Consensus 159 ig~~~~~~~~~~ 170 (238)
T 1wv3_A 159 VEGIWLEVQADG 170 (238)
T ss_dssp ETTEEEEECSSE
T ss_pred ECCEEEEEECCE
Confidence 999998886543
No 56
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans}
Probab=98.13 E-value=4.6e-06 Score=76.88 Aligned_cols=69 Identities=12% Similarity=0.010 Sum_probs=49.8
Q ss_pred CcceEEEEecCCChhHHHHHHhhhHHHHHHHHhhhhhhhhhccCcccHHHHHHHHHHHHHHHhccC----CCCceeEEEE
Q 015084 333 DKFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKRERLLSQCDASDVLRDAFFQTEASMNHH----YEVLFHTRFL 408 (413)
Q Consensus 333 ~~~~~FGVFDGHGG~~aA~fas~~L~~~I~~~l~~~~~~~~~~~~~~i~~aL~~AF~~~D~~l~~~----~sG~TA~vvl 408 (413)
++..+|+|+|||||..+++++++...+.+.+.+.. .....++++.|...+.+..... ..|||+++++
T Consensus 8 ~~~~l~~VaDG~GG~~~g~~AS~~~~~~l~~~~~~---------~~~~~~~~~~an~~l~~~~~~~~~~~~~GtT~~~~~ 78 (211)
T 3rnr_A 8 GDKAYCVVVDGMGGMIRGDEAAQRALSASVGVLDA---------GGSPLDAVLAAQAAVHRWASQGGILGRTGATMAVAA 78 (211)
T ss_dssp TTEEEEEEEEECTTSTTHHHHHHHHHHHHHHHHHT---------TCCHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEE
T ss_pred CCccEEEEEeCCcCcHHHHHHHHHHHHHHHHHHhc---------cCCHHHHHHHHHHHHHHHHhhccCCCCcchhheeee
Confidence 45679999999999999999999999998876554 1234455555555554443322 4689999988
Q ss_pred Ee
Q 015084 409 LF 410 (413)
Q Consensus 409 I~ 410 (413)
|.
T Consensus 79 i~ 80 (211)
T 3rnr_A 79 VN 80 (211)
T ss_dssp EE
T ss_pred ee
Confidence 75
No 57
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A*
Probab=75.77 E-value=3.3 Score=37.65 Aligned_cols=76 Identities=17% Similarity=0.015 Sum_probs=41.2
Q ss_pred CCceeeeecCCCCCCcceEEEEecCCChhHHHHHHhhhHHHHHHHHhhhhhhhhhccCcccHHHHHHHHHHHHHHHhccC
Q 015084 319 MEDVCYYHWPLPGVDKFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKRERLLSQCDASDVLRDAFFQTEASMNHH 398 (413)
Q Consensus 319 MEDah~~~~~l~~~~~~~~FGVFDGHGG~~aA~fas~~L~~~I~~~l~~~~~~~~~~~~~~i~~aL~~AF~~~D~~l~~~ 398 (413)
-.|.+.+... .....+|+|.||.|+...|..++..+...+...... ..+. .+++..++..+...
T Consensus 23 ~GD~y~~~~~---~~~~~~~~vaDg~G~G~~aa~~s~~~~~~l~~~~~~---------~~~~----~~~l~~~n~~l~~~ 86 (242)
T 3t91_A 23 SGDSYSMMEL---GARKYAAAISDGMGNGARAHFESNETIKLLEKILES---------GIDE----KIAIKTINSILSLR 86 (242)
T ss_dssp CSCEEEEEEE---TTTEEEEEEECC-----CCSEEECHHHHHHHHHHHH---------TCCH----HHHHHHHHHHHTTC
T ss_pred CCcEEEEEEe---CCCeEEEEEEeeCCCCHHHHHHHHHHHHHHHHHHHh---------CCCH----HHHHHHHHHHHHhc
Confidence 5677655432 122346999999998877777777666666554332 1123 34445556666544
Q ss_pred ---CCCceeEEEEEe
Q 015084 399 ---YEVLFHTRFLLF 410 (413)
Q Consensus 399 ---~sG~TA~vvlI~ 410 (413)
..++|++++++-
T Consensus 87 ~~~~~~~T~~~~~id 101 (242)
T 3t91_A 87 TTDEIYSTLDLSIID 101 (242)
T ss_dssp ----CCCCEEEEEEE
T ss_pred CCCCeEeEEEEEEEE
Confidence 346888887764
No 58
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus}
Probab=57.68 E-value=58 Score=29.51 Aligned_cols=44 Identities=23% Similarity=0.152 Sum_probs=28.4
Q ss_pred CCceeeeecCCCCCCcceEEEEecCCChhHHHHHHhhhHHHHHHHHh
Q 015084 319 MEDVCYYHWPLPGVDKFGLFGICDGHGGSAAAKSASEILPKMVAAIL 365 (413)
Q Consensus 319 MEDah~~~~~l~~~~~~~~FGVFDGHGG~~aA~fas~~L~~~I~~~l 365 (413)
-.|.+.+... + ...-+|.|.||-|+...|..++...-..+.+.+
T Consensus 26 gGD~y~~~~~-~--~~~~~~~vaD~~G~G~~aa~~s~~~~~~l~~~~ 69 (242)
T 3pu9_A 26 SGDTVELVER-P--GGGFSAVLVDGQGSGAGAKRLSLLVAGAAVRLL 69 (242)
T ss_dssp CSEEEEEEEC-T--TSEEEEEEEEESSSHHHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEEe-C--CCEEEEEEEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 5577765432 1 223468999999888877777776666655443
No 59
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A
Probab=43.82 E-value=74 Score=28.74 Aligned_cols=70 Identities=13% Similarity=0.043 Sum_probs=36.4
Q ss_pred ceEEEEecCCChhHHHHHHhhhHHHHHHHHhhhhhhhhhccCcccHHHHHHHHHHHHHHHhccC--CCCceeEEEEE
Q 015084 335 FGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKRERLLSQCDASDVLRDAFFQTEASMNHH--YEVLFHTRFLL 409 (413)
Q Consensus 335 ~~~FGVFDGHGG~~aA~fas~~L~~~I~~~l~~~~~~~~~~~~~~i~~aL~~AF~~~D~~l~~~--~sG~TA~vvlI 409 (413)
..+|.|.||-|+-..|..++..+...+........ +. .......+.+++..++..+.+. ..|+|++++++
T Consensus 64 ~~~~~vaD~~GhG~~aa~~s~~~~~~~~~~~~~~~-~~----~~~~~~~p~~~l~~ln~~l~~~~~~~~~T~~~~~i 135 (255)
T 3f79_A 64 RVAFYLADVSGHGASSAFVTVLLKFMTTRLLYESR-RN----GTLPEFKPSEVLAHINRGLINTKLGKHVTMLGGVI 135 (255)
T ss_dssp EEEEEEEEESSCSHHHHHHHHHHHHHHHHHHHHHT-TC----CC----CHHHHHHHHHHHHBTTBSSCCEEEEEEEE
T ss_pred EEEEEEEEecCCCHHHHHHHHHHHHHHHHHHHhhc-cc----cccccCCHHHHHHHHHHHHHhcCCCCEEEEEEEEE
Confidence 35789999888655555555554444443222100 00 0111222455566677777654 34677777665
No 60
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=40.93 E-value=23 Score=23.57 Aligned_cols=9 Identities=11% Similarity=-0.049 Sum_probs=3.4
Q ss_pred HHHHHhhcc
Q 015084 20 LLFIFIACK 28 (413)
Q Consensus 20 ~~~~~~~~~ 28 (413)
+++++|.||
T Consensus 30 v~~~~~~~r 38 (41)
T 2k9y_A 30 AGVGFFIHR 38 (41)
T ss_dssp HHHHHSSSS
T ss_pred HHHheeEee
Confidence 333333344
No 61
>1p9k_A ORF, hypothetical protein; alfal motif, RNA-binding protein, E.coli, montreal-kingston structural genomics initiative, BSGI; NMR {Escherichia coli} SCOP: d.66.1.6
Probab=37.10 E-value=23 Score=26.82 Aligned_cols=32 Identities=6% Similarity=0.114 Sum_probs=24.2
Q ss_pred CceeeCCeecCCCCCCCCCCCCceecCCCCEEEEcceeEEE
Q 015084 246 NGTLLNSQPINHPDSGSRHWGKPMELTSGDIITLGTTSSIH 286 (413)
Q Consensus 246 NGT~VNg~~i~~~~~~~r~~g~~~~L~~GD~I~lG~~~~~~ 286 (413)
..++|||+.+..+ ...+..||.|++++..+.+
T Consensus 46 G~V~VNG~~v~~~---------~~~v~~gd~I~v~~~~~~~ 77 (79)
T 1p9k_A 46 GQVKVDGAVETRK---------RCKIVAGQTVSFAGHSVQV 77 (79)
T ss_dssp HHHEETTBCCCCS---------SCCCCSSEEEEETTEEEEE
T ss_pred CEEEECCEEecCC---------CCCCCCCCEEEECCEEEEE
Confidence 4578999987652 3568899999998877654
No 62
>2l6w_A Beta-type platelet-derived growth factor receptor; transmembrane helix, receptor tyrosine kinase, heptad repeat membrane protein; NMR {Homo sapiens}
Probab=37.99 E-value=9.8 Score=25.80 Aligned_cols=21 Identities=33% Similarity=0.604 Sum_probs=9.6
Q ss_pred HHHHHHHHHHHHHHHHhhccc
Q 015084 9 VFTVLLMLILILLFIFIACKP 29 (413)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~ 29 (413)
++++++++.||++++++--||
T Consensus 16 al~vi~iisLIiLi~~w~qKP 36 (39)
T 2l6w_A 16 ALVVLTIISLIILIMLWQKKP 36 (39)
Confidence 344444444445444444444
No 63
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=28.41 E-value=64 Score=23.34 Aligned_cols=14 Identities=21% Similarity=0.617 Sum_probs=5.6
Q ss_pred HHHHHHHHHHHhhc
Q 015084 14 LMLILILLFIFIAC 27 (413)
Q Consensus 14 ~~~~~~~~~~~~~~ 27 (413)
|.||++++++++-|
T Consensus 20 LLLL~Lii~~LwK~ 33 (54)
T 2l8s_A 20 LLLLMLLILALWKI 33 (54)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHc
Confidence 33333344444433
No 64
>2cu3_A Unknown function protein; thermus thermophilus HB8, structural genomics, riken structu genomics/proteomics initiative, RSGI, NPPSFA; 1.70A {Thermus thermophilus} SCOP: d.15.3.2 PDB: 2htm_E
Probab=27.16 E-value=34 Score=24.77 Aligned_cols=26 Identities=23% Similarity=0.337 Sum_probs=17.9
Q ss_pred eeeCCeecCCCCCCCCCCCCceecCCCCEEEE
Q 015084 248 TLLNSQPINHPDSGSRHWGKPMELTSGDIITL 279 (413)
Q Consensus 248 T~VNg~~i~~~~~~~r~~g~~~~L~~GD~I~l 279 (413)
+.|||+-+.+ .+| ....|++||.|.|
T Consensus 32 vavN~~~v~~-----~~~-~~~~L~dgD~v~i 57 (64)
T 2cu3_A 32 VLLNEEAFLG-----LEV-PDRPLRDGDVVEV 57 (64)
T ss_dssp EEETTEEEEG-----GGC-CCCCCCTTCEEEE
T ss_pred EEECCEECCc-----ccc-CCcCCCCCCEEEE
Confidence 4577776664 223 4478999999976
No 65
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=27.12 E-value=57 Score=21.75 Aligned_cols=13 Identities=15% Similarity=0.296 Sum_probs=5.5
Q ss_pred HHHHHHHHHhhcc
Q 015084 16 LILILLFIFIACK 28 (413)
Q Consensus 16 ~~~~~~~~~~~~~ 28 (413)
++++.++++|.+|
T Consensus 24 v~li~~l~~~~~r 36 (38)
T 2k1k_A 24 AALLLGILVFRSR 36 (38)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHee
Confidence 3334444444443
No 66
>1wv3_A Similar to DNA segregation ATPase and related proteins; structural genomics, unknown function; 1.75A {Staphylococcus aureus subsp} SCOP: b.26.1.4 b.26.1.4
Probab=27.11 E-value=1e+02 Score=28.30 Aligned_cols=41 Identities=17% Similarity=0.300 Sum_probs=31.5
Q ss_pred EEEeccCCCCCCcEEeCCCCCCCeEeCCcccccceeEEEEeCCcceEEE
Q 015084 191 RCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWEL 239 (413)
Q Consensus 191 ~~~L~~~~~~~~~~~IGR~~~~divl~d~~VSr~HA~I~~~~~~~~~~L 239 (413)
.+.|.... .++||....|+|.|++. ..|++|.++++ +.|.+
T Consensus 14 ~~~L~~~~----~~tiG~~~~~~itl~~~---~~~i~l~~~~~-~~~~v 54 (238)
T 1wv3_A 14 MLNLRDGK----TYTISEDERADITLKSL---GEVIHLEQNNQ-GTWQA 54 (238)
T ss_dssp EEECCTTC----CEEEESCTTSSEECTTC---CCCEEEEECTT-SCEEE
T ss_pred EEecCCCc----EEEECCCccceEEecCC---CccEEEEEccC-CeEEE
Confidence 45555332 59999999999999977 77888988774 46776
No 67
>1nkz_B Light-harvesting protein B-800/850, beta chain; light harvesting complex II, trans-membrane helices, rhodopi glucoside; HET: CXM RG1 BOG BCL; 2.00A {Rhodoblastus acidophilus} SCOP: f.3.1.1 PDB: 1kzu_B* 2fkw_B* 1ijd_B*
Probab=22.52 E-value=88 Score=21.35 Aligned_cols=21 Identities=33% Similarity=0.678 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHHHHHhhcccC
Q 015084 10 FTVLLMLILILLFIFIACKPW 30 (413)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~ 30 (413)
+.+...+.++-=+++++.|||
T Consensus 19 ~~~F~~iA~vAH~l~w~wrPW 39 (41)
T 1nkz_B 19 TRVFLGLALVAHFLAFSATPW 39 (41)
T ss_dssp HHHHHHHHHHHHHHHHHHSST
T ss_pred HHHHHHHHHHHHHHHHHhCCC
Confidence 444444555566778899999
No 68
>2rdd_B UPF0092 membrane protein YAJC; drug resistance, multidrug efflux, transporter, antiporter, novel transmembrane helix, ACRB, inner membrane; HET: AIC; 3.50A {Escherichia coli}
Probab=21.83 E-value=49 Score=21.74 Aligned_cols=11 Identities=36% Similarity=0.845 Sum_probs=6.1
Q ss_pred HHHHHhhcccC
Q 015084 20 LLFIFIACKPW 30 (413)
Q Consensus 20 ~~~~~~~~~~~ 30 (413)
.++.+|..||=
T Consensus 14 ~ifYFl~iRPQ 24 (37)
T 2rdd_B 14 LIFYFMILRPQ 24 (37)
T ss_dssp HHHHHHTHHHH
T ss_pred HHHHHHHhhhH
Confidence 44556666663
No 69
>1tyg_B YJBS; alpha beta barrel, protein-protein complex, THis, BIOS protein; 3.15A {Bacillus subtilis} SCOP: d.15.3.2
Probab=21.28 E-value=52 Score=25.81 Aligned_cols=26 Identities=23% Similarity=0.397 Sum_probs=18.0
Q ss_pred eeeCCeecCCCCCCCCCCCCceecCCCCEEEE
Q 015084 248 TLLNSQPINHPDSGSRHWGKPMELTSGDIITL 279 (413)
Q Consensus 248 T~VNg~~i~~~~~~~r~~g~~~~L~~GD~I~l 279 (413)
+.|||+-+.+ ..| ....|++||.|.|
T Consensus 55 VavNg~iV~~-----~~~-~~~~L~dGD~Vei 80 (87)
T 1tyg_B 55 VERNKEIIGK-----ERY-HEVELCDRDVIEI 80 (87)
T ss_dssp EEETTEEECG-----GGT-TTSBCCSSSEEEE
T ss_pred EEECCEECCh-----hhc-CCcCCCCCCEEEE
Confidence 5577776664 233 3478999999976
No 70
>3ega_A Pellino-2, protein pellino homolog 2; FHA domain, E3 ubiquitin ligase, substrate binding phosphoprotein, protein binding; 1.80A {Homo sapiens} PDB: 3egb_A
Probab=21.07 E-value=4e+02 Score=25.07 Aligned_cols=29 Identities=28% Similarity=0.430 Sum_probs=20.7
Q ss_pred EEeCCCC--CCCeEeCC---------------cccccceeEEEEeC
Q 015084 204 LTLGRVS--PSDVLLKD---------------SEVSGKHALINWNP 232 (413)
Q Consensus 204 ~~IGR~~--~~divl~d---------------~~VSr~HA~I~~~~ 232 (413)
+-|||+. ..|+++.| ..|||.-|+|..+.
T Consensus 90 FQIGRste~pIDFvV~dt~~g~~~~~~~~~~~StISRfACRI~~dR 135 (263)
T 3ega_A 90 FQVGRSTESPIDFVVTDTISGSQNTDEAQITQSTISRFACRIVCDR 135 (263)
T ss_dssp EEEESCCSTTCSEECCCC----------CCCCCCSCSSCEEEEEES
T ss_pred hhhcCCCCCCCCeEEeccccccccCCcCCcccchhhheeEEEEecc
Confidence 5688888 45666532 35999999998754
No 71
>1lgh_B LH II, B800/850, light harvesting complex II; bacteriochlorophyll, dexter energy transfer, foerster exciton transfer mechanism; HET: BCL LYC DET HTO; 2.40A {Phaeospirillum molischianum} SCOP: f.3.1.1
Probab=20.49 E-value=1e+02 Score=21.50 Aligned_cols=22 Identities=23% Similarity=0.655 Sum_probs=14.5
Q ss_pred HHHHHHHHHHHHHHHHhhcccC
Q 015084 9 VFTVLLMLILILLFIFIACKPW 30 (413)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~ 30 (413)
++.+...+.++-=+++++.|||
T Consensus 23 ~~~~F~~iA~vAH~L~~~wrPW 44 (45)
T 1lgh_B 23 TFSAFIILAAVAHVLVWVWKPW 44 (45)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHHHHHhcCC
Confidence 3444444555566778899999
No 72
>3hvz_A Uncharacterized protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.20A {Clostridium leptum}
Probab=20.40 E-value=52 Score=25.23 Aligned_cols=25 Identities=20% Similarity=0.392 Sum_probs=18.6
Q ss_pred ceeeCCeecCCCCCCCCCCCCceecCCCCEEEEcc
Q 015084 247 GTLLNSQPINHPDSGSRHWGKPMELTSGDIITLGT 281 (413)
Q Consensus 247 GT~VNg~~i~~~~~~~r~~g~~~~L~~GD~I~lG~ 281 (413)
|..|||+.+.- .++|++||+|+|=.
T Consensus 43 ~AkVNG~~v~L----------~~~L~~gd~VeIit 67 (78)
T 3hvz_A 43 GAKVDGRIVPI----------DYKVKTGEIIDVLT 67 (78)
T ss_dssp EEEETTEEECT----------TCBCCTTCBEEEEE
T ss_pred EEEECCEEcCC----------CcccCCCCEEEEEc
Confidence 45678887774 37799999997743
No 73
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=20.00 E-value=60 Score=22.52 Aligned_cols=14 Identities=21% Similarity=0.491 Sum_probs=6.3
Q ss_pred HHHHHHHHHHHhhc
Q 015084 14 LMLILILLFIFIAC 27 (413)
Q Consensus 14 ~~~~~~~~~~~~~~ 27 (413)
+.+++|+++++|.+
T Consensus 21 vll~vi~~l~~~~~ 34 (44)
T 2jwa_A 21 ILLVVVLGVVFGIL 34 (44)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhh
Confidence 33444444444444
Done!