BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015085
(413 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P54453|YQEH_BACSU Uncharacterized protein YqeH OS=Bacillus subtilis (strain 168)
GN=yqeH PE=1 SV=1
Length = 366
Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/256 (31%), Positives = 135/256 (52%), Gaps = 39/256 (15%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSF 213
V+C RC L++Y +++DV+ L D DF + L S+V+ +VD DF+GS+
Sbjct: 34 VICQRCFRLKNYNEIQDVS----LTDDDFLNI----LHGIGETDSLVVKIVDIFDFNGSW 85
Query: 214 PRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARED 273
+ ++V G P ++LV K D+LP SL R W+++ A+E
Sbjct: 86 INGLQRLV----------------GGNP-ILLVGNKADILPKSLKRERLIQWMKREAKEL 128
Query: 274 GISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAG 333
G+ K + VSA + G++ +ID + + +V+ +G N GKST +N I K V
Sbjct: 129 GL-KPVDVFLVSAGRGQGIREVIDAIEHYRNGK-DVYVVGCTNVGKSTFINRIIKEVS-- 184
Query: 334 RGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQ 393
GEE I T + PGTTL + + L + L+DTPG+++ +Q+ + +++
Sbjct: 185 ----GEEDII----TTSQFPGTTLDAIEIP--LDDGSSLYDTPGIINNHQMAHYVNKKDL 234
Query: 394 KLVNINKELKPRTYRI 409
K+++ KELKPRT+++
Sbjct: 235 KILSPKKELKPRTFQL 250
>sp|Q66GP9|NOA1_ARATH NO-associated protein 1, chloroplastic/mitochondrial OS=Arabidopsis
thaliana GN=NOA1 PE=1 SV=1
Length = 561
Score = 75.5 bits (184), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 130/312 (41%), Gaps = 71/312 (22%)
Query: 81 LTVCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEA 140
++ C GCG +Q ++ PG+ LV +E
Sbjct: 105 VSCCYGCGAPLQTSDVDSPGFV-------------------------------DLVTYEL 133
Query: 141 ENETSEVKKHE--KPVVCARCHALRHYGKVKDVTVENLLP---DFDFDHTVGRKLMSASG 195
+ KKH + ++C RC L H + V P F + KL
Sbjct: 134 K------KKHHQLRTMICGRCQLLSHGHMITAVGGNGGYPGGKQFVSADELREKLSHLRH 187
Query: 196 ARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPS 255
+++++ +VD DF+GSF +V +V G P ++LV+TKIDLLP
Sbjct: 188 EKALIVKLVDIVDFNGSFLARVRDLV----------------GANP-IILVITKIDLLPK 230
Query: 256 SLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQ 315
WV + ++ + +H S+ G+ + ++ R +V+ +GA
Sbjct: 231 GTDMNCIGDWVVEVTMRKKLN-VLSVHLTSSKSLDGVSGVASEIQKEKKGR-DVYILGAA 288
Query: 316 NAGKSTLLNAIAKSV---DAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKL 372
N GKS +NA+ K++ D + K I ++ VPGTTLG +++ + + KL
Sbjct: 289 NVGKSAFINALLKTMAERDPVAAAAQKYKPI-----QSAVPGTTLGPIQINAFVGGE-KL 342
Query: 373 FDTPGL-LHPNQ 383
+DTPG+ LH Q
Sbjct: 343 YDTPGVHLHHRQ 354
>sp|Q6YPG5|NOS_ORYSJ Putative nitric oxide synthase OS=Oryza sativa subsp. japonica
GN=Os02g0104700 PE=3 SV=1
Length = 547
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 131/313 (41%), Gaps = 69/313 (22%)
Query: 79 PKLTVCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVF 138
P C GCG +Q + PGY VH A + LKK
Sbjct: 95 PSAAACYGCGAPLQTADEAAPGY----------------VHPA-----TYDLKK------ 127
Query: 139 EAENETSEVKKHE-KPVVCARCHALRHYGKVKDVTVENLLP---DFDFDHTVGRKLMSAS 194
+ H+ + V+C RC L H + V P F + KL
Sbjct: 128 ---------RHHQLRTVLCGRCKLLSHGHMITAVGGHGGYPGGKQFVSADQLRDKLSYLR 178
Query: 195 GARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLP 254
+++++ +VD DF+GSF +V D A N ++LV+TK+DLLP
Sbjct: 179 HEKALIIKLVDIVDFNGSFLARV----RDFAGANP-------------IILVITKVDLLP 221
Query: 255 SSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGA 314
WV + + ++ + +H S+ G+ +I ++ R +V+ +G+
Sbjct: 222 RDTDLNCIGDWVVEAVVKKKLN-VLSVHLTSSKSLVGVTGVISEIQQEKKGR-DVYILGS 279
Query: 315 QNAGKSTLLNAIAKSV---DAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAK 371
N GKS ++A+ +++ D + K I ++ VPGTTLG +++E L K
Sbjct: 280 ANVGKSAFISAMLRTMAYKDPVAAAAQKYKPI-----QSAVPGTTLGPIQIEAFL-GGGK 333
Query: 372 LFDTPGL-LHPNQ 383
L+DTPG+ LH Q
Sbjct: 334 LYDTPGVHLHHRQ 346
>sp|C4QZZ7|GEP3_PICPG Genetic interactor of prohibitins 3, mitochondrial OS=Komagataella
pastoris (strain GS115 / ATCC 20864) GN=GEP3 PE=3 SV=1
Length = 576
Score = 62.0 bits (149), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 141/348 (40%), Gaps = 80/348 (22%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPS-----QNLNKVRKSHLVHVANESEFSNSLKKGGLVVF 138
CP CGV++Q +P GY + P +N K L E ++ L
Sbjct: 61 CPSCGVVLQTEHPDKDGYCLLPKGERKVKNYQNELKEKLFLNVKREELADRLGH------ 114
Query: 139 EAENETSEVKK--HEKP-----VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLM 191
E ++E+ + K ++KP +VC RC ++Y + D ++ P+ K++
Sbjct: 115 EVDSESLIIPKEMYQKPRTPKRLVCQRCFKSQNYSLI-DHSIREENPE--------HKIL 165
Query: 192 SASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKID 251
+ + ++ V+ A DF +++ T ++ V+TK D
Sbjct: 166 DEIPSNANIVHVLSAVDFPLGLSKELVNRFKPT-----------------QITYVITKSD 208
Query: 252 -LLPSSLSPTRFEHWVRQRAREDGISKIT-----KLHFVSAVKNWGLKSLIDDVVDLAGK 305
P L R ED + K+ K+ VS +NWGLK L+ +
Sbjct: 209 VFFPDKLGLQR----TGAAYFEDSLVKLVGADPRKVVLVSGKRNWGLKQLLSTL-----P 259
Query: 306 RGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNI-----VSHLTEAPVPGTTLGIV 360
RG + +G N GKSTL+ +I G D +K VSHL P T +
Sbjct: 260 RGPNYFLGMTNTGKSTLIRSIV-------GKDYSKKQTENGPGVSHL-----PSFTRKPM 307
Query: 361 RVEGVLPAQAKLFDTPGLLHPNQITTRLTREE--QKLVNINKELKPRT 406
+ + + +L D PG PN + +EE + ++N+ K+LKP T
Sbjct: 308 KFK-MDNNSLELVDLPGYTAPNGGVYKYLKEENYRDILNV-KQLKPLT 353
>sp|C5DEU6|GEP3_LACTC Genetic interactor of prohibitins 3, mitochondrial OS=Lachancea
thermotolerans (strain ATCC 56472 / CBS 6340 / NRRL
Y-8284) GN=GEP3 PE=3 SV=1
Length = 535
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 117/307 (38%), Gaps = 47/307 (15%)
Query: 80 KLTVCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFE 139
+ C CGV +Q+ N + G++ P + RK ++ FS L+ +
Sbjct: 20 RFVSCTSCGVTLQNNNVRGTGFYTPPKAQIE--RKRPVIEDLKYLLFSQDLQS-----LK 72
Query: 140 AENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSV 199
+E E K KP++C RC+ H+ N DF +++ A +
Sbjct: 73 SELSAEERPKKNKPLICKRCNDALHH---------NTFSKEDFRRYSMQEVYRHVPAGAD 123
Query: 200 VLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSP 259
+ VV DF P ++ V + N P L+ K +P
Sbjct: 124 IYHVVPLTDF----PLQLNSAVLKDSRYNSALLLSKGDQVTPDKSLLQRK--------AP 171
Query: 260 TRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGK 319
F+ +R + + I SA K W ++S+ + R N + IG N+GK
Sbjct: 172 QFFKDMLRLKMNYNSNKSIA----FSASKGWNIQSVYSVL------RSNSFLIGCPNSGK 221
Query: 320 STLLNAIAK---SVDAGRGGDGEEKNIVSHLTEAPVPGTTLGI------VRVEGVLPAQA 370
STL+NA+ K S+ G + E IV + +P T + +V LP +
Sbjct: 222 STLVNALLKKFPSLKPSEGNNASEAEIVRGAGVSNIPNMTRDLQSYNIGSKVINDLPGYS 281
Query: 371 KLFDTPG 377
+ +PG
Sbjct: 282 TNYGSPG 288
>sp|A7TQC5|GEP3_VANPO Genetic interactor of prohibitins 3, mitochondrial
OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM
70294) GN=GEP3 PE=3 SV=1
Length = 551
Score = 58.5 bits (140), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 133/316 (42%), Gaps = 63/316 (19%)
Query: 81 LTVCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEA 140
L C CG+ +Q NP GY+ +P +V K + FS ++K + E
Sbjct: 24 LQACSSCGIKLQSKNPALIGYYTKPKP--LEVGKVETLEDVKYMLFSQDIQK----IKEI 77
Query: 141 ENETS-EVKKHEKP--VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR 197
E+ T+ E +K+ P ++C RC H K DV DF + ++++ +
Sbjct: 78 EDGTTLEDEKNRIPHSLICKRCSDAVHQNKY-DV--------MDFKNCSLKEVIRSVPND 128
Query: 198 SVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKID--LLPS 255
++ + + FP V K + + +E+ VLV TK D L S
Sbjct: 129 KPIVSIASLPE----FPFHVNKNILENEKES---------------VLVFTKADQVLKTS 169
Query: 256 SLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQ 315
S + TR + + + ++ K+ VS++K W L L+ ++ R N + +G
Sbjct: 170 SATSTRLPIFFKDYFKYHLGLQVNKVLAVSSLKKWNLSGLLSNL------RNNSYFLGNP 223
Query: 316 NAGKSTLLNAIAKSVDAGR-----------GGDGEEKNIVSHLTEAPVPGTTL--GIVR- 361
N GKSTL+N++ + + + D + K HL +A + G + + R
Sbjct: 224 NVGKSTLMNSLIQRYNGTKLDFNSNISDDMVNDAQHK----HLRKAQLAGVSHIPNLTRE 279
Query: 362 VEGVLPAQAKLFDTPG 377
+G + +++D PG
Sbjct: 280 CQGYQVDKKRIYDLPG 295
>sp|C4XXL5|GEP3_CLAL4 Genetic interactor of prohibitins 3, mitochondrial OS=Clavispora
lusitaniae (strain ATCC 42720) GN=GEP3 PE=3 SV=1
Length = 619
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 103/262 (39%), Gaps = 47/262 (17%)
Query: 75 DEATPKLTVCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLV---HVANESEFSNSLK 131
D PK C CGVL+Q+ + PG+++ P + + +++ +V H+A+ E L
Sbjct: 59 DAILPK---CSSCGVLLQNEDRSKPGFYLAPGSSRDFRKETDVVYEKHLASLEEADRDLL 115
Query: 132 KGGLVVFEAENETSEVKKHEKP---VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGR 188
G + + K ++P V C RC +D + P F
Sbjct: 116 LNGAQGLQVSGQKETPKSQKQPANKVSCIRC---------RDSHYRSQFPLDQFAVAAVS 166
Query: 189 KLMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPR-VVLVV 247
+M + A + + VV A DF S V + S PR + VV
Sbjct: 167 DVMHSIPAYANLAYVVSATDFPMSINEDVFRHRS------------------PREMQFVV 208
Query: 248 TKIDLL---PSSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAG 304
TK DL S S + + R + + +H VS +W + L D +
Sbjct: 209 TKNDLFFQKNSVASKYGLQFYQDYFWRMFNVP-VENVHCVSGTVDWNTEKLFDSL----- 262
Query: 305 KRGNVWAIGAQNAGKSTLLNAI 326
R N + IG N+GKSTL+ ++
Sbjct: 263 -RDNTYFIGCVNSGKSTLIQSL 283
>sp|A5DDR3|GEP3_PICGU Genetic interactor of prohibitins 3, mitochondrial OS=Meyerozyma
guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 /
JCM 1539 / NBRC 10279 / NRRL Y-324) GN=GEP3 PE=3 SV=2
Length = 599
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 109/259 (42%), Gaps = 52/259 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLV---------HVANESEFSNSLKKGG 134
C CG+ +Q T+P PG++ P VRK +LV + ++S ++
Sbjct: 59 CNSCGITLQKTDPDRPGFYREPGTGQKLVRKENLVASNAYNGLDDDDLKLLLNSSGEEKD 118
Query: 135 LVVFEAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSAS 194
+ +F+ NE S K + + C RC + + ++ P D +M++
Sbjct: 119 ISLFKQRNEPSP-KVAPQSIQCIRCRE----AQFRSEYSQDEFPIESLD-----AIMTSL 168
Query: 195 GARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLP 254
+ ++ V+ AADF S +V S ++ V+TK DLL
Sbjct: 169 PPDAKLVYVISAADFPMSLDSRVFSYRSAL-----------------EILFVITKCDLLF 211
Query: 255 SSLSPTR------FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGK-RG 307
+L+ F+ + R+ G+S + S +W + +L+ + GK R
Sbjct: 212 PTLNLANKYGLPFFQDYF---YRKHGVSG-ENVVLTSGKIDWNIPTLLKN-----GKIRD 262
Query: 308 NVWAIGAQNAGKSTLLNAI 326
N + IG+ N+GKSTLL ++
Sbjct: 263 NSYLIGSVNSGKSTLLKSM 281
>sp|Q09700|YA29_SCHPO Uncharacterized protein C2F7.09c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC2F7.09c PE=4 SV=1
Length = 491
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 145/359 (40%), Gaps = 74/359 (20%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRP---SQNLNKVRKSHLV--HVANESEFSNSLKKGGLVV 137
C GCG +Q N GY I+P S +K S+L+ ++ ++ F+N+ K +
Sbjct: 6 FCRGCGQTLQSANESATGY-IKPLKLSGIFSKGSVSNLLKKNLDEQAIFNNAFKNLNPQI 64
Query: 138 FEAENETSEVKKHEKPV------VCARCHALRHYGKVKDVTV----ENLLPDFDFDHTVG 187
+ T+ HEK + C RCH L+ + +++ + + LPD
Sbjct: 65 KKHFPNTTSFPFHEKEIGRTDLLWCQRCHDLKFHSRIRPKELLQEPQTTLPDI------- 117
Query: 188 RKLMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVV 247
+ + + +S L++ V D E + + V +
Sbjct: 118 --ISTVNNDKSTCLII----------------QVIDVTEVIFQDFVSATQYTHFPVFHLF 159
Query: 248 TKIDLLPSSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRG 307
T D+LP P + +W+ GIS + + S N + L+ + L RG
Sbjct: 160 THADVLP----PKK-PYWLFPGL---GISSKYAMLYTSHSFNL-VDKLLGRINPLLCSRG 210
Query: 308 NVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGI----VRVE 363
+V+ +G N+GKSTLL +AK G+G + L ++ +PGTT I +
Sbjct: 211 HVYVVGEANSGKSTLLKTLAKR------GNGVFNEL---LLDSFLPGTTQAIKGYPTQYF 261
Query: 364 GVLPAQAK---LFDTPGL------LHPNQITTRLTREEQKLVNINKEL--KPRTYRIKV 411
G Q +FDTPG L P T LT K + NK+L KP YR++
Sbjct: 262 GSCFKQLSEGLIFDTPGYRGNLKSLLPWVDTKLLTSLVPKTRSRNKQLTSKPVQYRVRF 320
>sp|Q8NC60|NOA1_HUMAN Nitric oxide-associated protein 1 OS=Homo sapiens GN=NOA1 PE=1 SV=2
Length = 698
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 64/127 (50%), Gaps = 8/127 (6%)
Query: 278 ITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKS-VDAGRGG 336
+ + +SA +G++ LI + RG+V+ +GA NAGKSTL N + +S +G
Sbjct: 310 VRDVRLISAKTGYGVEELISALQRSWRYRGDVYLVGATNAGKSTLFNTLLESDYCTAKGS 369
Query: 337 DGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN--QITTRLTREEQK 394
+ ++ +S P PGTTL +++ P ++F L + Q L+ +EQ
Sbjct: 370 EAIDRATIS-----PWPGTTLNLLKFPICNPTPYRMFKRHQRLKKDSTQAEEDLSEQEQN 424
Query: 395 LVNINKE 401
+N+ K+
Sbjct: 425 QLNVLKK 431
>sp|Q75B55|GEP3_ASHGO Genetic interactor of prohibitins 3, mitochondrial OS=Ashbya
gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 /
NRRL Y-1056) GN=GEP3 PE=3 SV=2
Length = 547
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 102/256 (39%), Gaps = 53/256 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAE-- 141
C CG+ +Q+ PGYF+ P + + A + E + L G + E +
Sbjct: 17 CKSCGIELQNKIKDGPGYFVTPQKAIRPA--------AKQLELAKQLLYGERLRIEKQLT 68
Query: 142 ---NETSEVKKHEKPVVCARCHALRHYGKVKDVTV-ENLLPDFDFDHTVGRKLMSASGAR 197
T E K P C RC H+ + E+ L D VG+ + +
Sbjct: 69 GPDRNTLEKWKELVPPSCKRCMDALHHNRYDTAEFPEHTLED------VGKGVPRDA--- 119
Query: 198 SVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLL---P 254
VV + F R+V + + +V ++ +KID++ P
Sbjct: 120 -VVYHIAPLWQFPMGLDRRVLQ-------------------SSKKVCVLFSKIDMVVQRP 159
Query: 255 SSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGA 314
S + P + + D KIT F SA+K W ++++ + + + + +G
Sbjct: 160 SHM-PQDVGAFFQSLLYHDLHVKITNFRFFSALKQWNIQTVRNALSKES------YLLGG 212
Query: 315 QNAGKSTLLNAIAKSV 330
NAGKS+L+NA+ ++V
Sbjct: 213 PNAGKSSLINALMRTV 228
>sp|Q9JJG9|NOA1_MOUSE Nitric oxide-associated protein 1 OS=Mus musculus GN=Noa1 PE=1 SV=1
Length = 693
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 74/357 (20%), Positives = 126/357 (35%), Gaps = 102/357 (28%)
Query: 79 PKLTVCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVF 138
P C GCG + +P PGY E +F ++
Sbjct: 137 PSGIYCSGCGAELHCQHPGLPGYL-------------------PEEKFRDA--------- 168
Query: 139 EAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARS 198
A+ E + VC RC L H+G+ + V +R
Sbjct: 169 -AQAEGGPAR-----TVCQRCWLLVHHGRALRLQV----------------------SRD 200
Query: 199 VVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLS 258
L +V AA P V MV+ + K +++++ K+DLLP +
Sbjct: 201 QYLELVSAA-LRRPGPALVLYMVNLLDLPDALLPDLPKLVGPKQLIVLGNKVDLLPQD-A 258
Query: 259 PTRFEHWVRQRAREDGI-----------------------------------SKITKLHF 283
P + +R+R +D I + + +
Sbjct: 259 PGYLKR-LRKRLWDDCIRAGLVVAPGHQGPQYPAGDEPLEEIKNQNPSSRSRTVVKDVRL 317
Query: 284 VSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKS-VDAGRGGDGEEKN 342
+SA +G++ +I + RG+V+ +G NAGKSTL N + +S +G + ++
Sbjct: 318 ISAKTGYGVEEMISALQRSWRYRGDVYLVGTTNAGKSTLFNTLLESDYCTAKGSEAIDRA 377
Query: 343 IVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTR--LTREEQKLVN 397
+S P PGTTL +++ P ++F L + L+ EEQ +N
Sbjct: 378 TIS-----PWPGTTLNLLKFPICNPTPYRMFKRQRRLQEDATKAEEDLSEEEQSQLN 429
>sp|Q6BMA8|GEP3_DEBHA Genetic interactor of prohibitins 3, mitochondrial OS=Debaryomyces
hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC
0083 / IGC 2968) GN=GEP3 PE=3 SV=2
Length = 593
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 106/275 (38%), Gaps = 62/275 (22%)
Query: 81 LTVCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLV---- 136
C CG+ +Q+ NP PG++ PS V+ E E N L G V
Sbjct: 38 FATCNSCGIKLQNENPSKPGFYRPPSARPKLVKP--------EDESFNRLMDGLSVEDRK 89
Query: 137 -VFEAENET-------------SEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDF 182
+ + + T + K E + C RC + K + LP
Sbjct: 90 LLLNSSDATLPQPVTASTAAATTTNTKKEGDIQCIRCREAMY----KSNFSWDELPVESI 145
Query: 183 DHTVGRKLMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPR 242
D K+MS V+ +V+A DF S R + K N +
Sbjct: 146 D-----KIMSTIPPDGNVVYIVNAVDFPLSLNRSIFKY-----------------RNPSQ 183
Query: 243 VVLVVTKIDLL-PSSLSPTRF--EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDV 299
+ +VTK DLL PS+ R+ + +R G + K+ S + +W +K +I +
Sbjct: 184 ITFLVTKCDLLFPSAQLSNRYGATFFKDYLSRTHG-ADPEKVFVTSGMIDWNMKDIIKAL 242
Query: 300 VDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAGR 334
D N + +G N+GKST++ ++ +++ +
Sbjct: 243 PD------NSYMVGGVNSGKSTVIKSLLYTMEKSK 271
>sp|C5DY82|GEP3_ZYGRC Genetic interactor of prohibitins 3, mitochondrial
OS=Zygosaccharomyces rouxii (strain ATCC 2623 / CBS 732
/ NBRC 1130 / NCYC 568 / NRRL Y-229) GN=GEP3 PE=3 SV=1
Length = 565
Score = 48.9 bits (115), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 108/259 (41%), Gaps = 54/259 (20%)
Query: 80 KLTVCPGCGVLMQDTNPKHPGYFIRPSQ-NLNKVRKSHLV-HVANESEFSNSLKKGGLVV 137
+L C CG+ +Q+ NPK GY+I+P + +NK++ V ++ + + ++ +
Sbjct: 33 RLINCNSCGIKLQNENPKTIGYYIKPKKPTVNKLQSLEDVKYLLFSQDLQHVKEQQDVGS 92
Query: 138 FEAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR 197
E NET E P++C RC+ H + D+ +F ++
Sbjct: 93 LEELNETM-----ESPLICKRCNDALHRNQY-DLK--------EFGRYTITDVLEKIPRG 138
Query: 198 SVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRV--VLVVTKIDLLPS 255
S +L VV +F F + + + VP L++TK D L +
Sbjct: 139 SNILHVVPLPEFPFHFEKSLLE--------------------VPHFNTSLLLTKGDQLAN 178
Query: 256 S------LSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNV 309
S F+ +++ + GI K VS +KNW ++S A N
Sbjct: 179 DKNTLQRRSLVFFKDFLKYQL---GIIS-NKTVAVSGLKNWNIQSA------YAAMNANS 228
Query: 310 WAIGAQNAGKSTLLNAIAK 328
+ +G N GKSTL+N++ +
Sbjct: 229 YLVGDANVGKSTLINSVMQ 247
>sp|Q32LB9|NOA1_BOVIN Nitric oxide-associated protein 1 OS=Bos taurus GN=NOA1 PE=2 SV=1
Length = 694
Score = 48.5 bits (114), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 64/127 (50%), Gaps = 8/127 (6%)
Query: 278 ITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKS-VDAGRGG 336
+ + +SA +G++ LI + RG+V+ +G+ NAGKSTL N + +S +G
Sbjct: 311 LRDVRLISAKTGYGVEELISALQRSWRYRGDVYLVGSTNAGKSTLFNTLLESDYCIAKGA 370
Query: 337 DGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTR--LTREEQK 394
+ ++ +S P PGTTL +++ P ++F L + L+++EQ
Sbjct: 371 EAIDRATIS-----PWPGTTLNLLKFPICNPTPYRMFQRQKRLKRDATEAEEDLSQQEQN 425
Query: 395 LVNINKE 401
+N+ K+
Sbjct: 426 KLNLLKK 432
>sp|Q7SHR8|NOG2_NEUCR Nucleolar GTP-binding protein 2 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=nog-2 PE=3 SV=1
Length = 619
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 87/194 (44%), Gaps = 45/194 (23%)
Query: 199 VVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLS 258
V+L V+DA D G+ R V K ++ A ++ V+ KIDL+PS +
Sbjct: 234 VILHVIDARDPLGTRCRHVEKYLATEAPHKH-------------LIFVLNKIDLVPSKTA 280
Query: 259 PTRFEHWVRQRAREDGISKITKLHFVSAVKN-WGLKSLID-----DVVDLAGKRGNVWAI 312
W+R ++ + S++KN +G SLID ++ K+ +V +
Sbjct: 281 AA----WIRVLQKDHPTCAMR-----SSIKNPFGRGSLIDLLRQFSILHKDRKQISVGLV 331
Query: 313 GAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKL 372
G N GKS+++NA+ RG V+ + AP+PG T V L + L
Sbjct: 332 GYPNVGKSSIINAL-------RG------KPVAKV--APIPGETKVWQYV--TLMRRIYL 374
Query: 373 FDTPGLLHPNQITT 386
D PG++ PNQ T
Sbjct: 375 IDCPGIVPPNQNDT 388
>sp|Q6CLQ8|GEP3_KLULA Genetic interactor of prohibitins 3, mitochondrial OS=Kluyveromyces
lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC
1267 / NRRL Y-1140 / WM37) GN=GEP3 PE=3 SV=2
Length = 550
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 99/254 (38%), Gaps = 46/254 (18%)
Query: 80 KLTVCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKS-----HLVHVANESEFSNSLKKGG 134
+ C CGV +Q NP GY+ P VRK L ++ E LKK
Sbjct: 13 RFVSCKSCGVELQSKNPSVTGYYKPP----RAVRKDAGTIEDLKYLMFTQEL--QLKKHE 66
Query: 135 LVVFEAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSAS 194
+ + + + + + K +VC RC D N DF + A
Sbjct: 67 IGLLDPDTDPDYKEPIPKRLVCKRC---------VDAISHNRYNSSDFPIHSFNDIKGAL 117
Query: 195 GARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLL- 253
+ V VV +DF S + + AE+N R + L+++K D +
Sbjct: 118 PHAANVYHVVSLSDFPLSLDKTIL------AEKNNRNY------------LLLSKADQIT 159
Query: 254 -PSSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAI 312
SS+ P + + + R + K+ S +NW + S V++ KR + +
Sbjct: 160 YKSSMLPHKGSAFFAEFCRRHIGVHVKKVVLFSNPRNWNIPS----VINALAKR--CYLL 213
Query: 313 GAQNAGKSTLLNAI 326
G N GK++L+N++
Sbjct: 214 GNPNVGKTSLINSL 227
>sp|O74791|GRN1_SCHPO GTPase grn1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=grn1 PE=1 SV=1
Length = 470
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 84/200 (42%), Gaps = 42/200 (21%)
Query: 196 ARSVVLMVVDAADFDGSFPRKVAKMV-SDTAEENERAWKEGKSGNVPRVVLVVTKIDLLP 254
A V+L V+DA D +G+ + V + V + +AEE R++ V+ KIDL+P
Sbjct: 162 ASDVILYVLDARDPEGTRSKDVERQVLASSAEEK-------------RLIFVINKIDLVP 208
Query: 255 SSLSPTRFEHWVRQR--------AREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKR 306
S + WV R S + L SA + + +L+ + + K+
Sbjct: 209 SEV----LNKWVTYLRNFFPTIPMRSASGSGNSNLKHQSASASSTISNLLKSLKSYSAKK 264
Query: 307 G-----NVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVR 361
V IG N GKS+++NA+ GR N V G T +
Sbjct: 265 KLKSSLTVGVIGYPNVGKSSVINALVNRSANGRSAPCPAGN---------VAGMTTSLRE 315
Query: 362 VEGVLPAQAKLFDTPGLLHP 381
V+ L + +L D+PG++ P
Sbjct: 316 VK--LDNKLRLVDSPGIVFP 333
>sp|Q8TFK7|GEP3_CANGA Genetic interactor of prohibitins 3, mitochondrial OS=Candida
glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC
0622 / NRRL Y-65) GN=GEP3 PE=3 SV=1
Length = 526
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 103/278 (37%), Gaps = 75/278 (26%)
Query: 80 KLTVCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFE 139
+L C CGV +Q+ P GY+ + NL V+K L V F +++ + +
Sbjct: 13 RLIDCNSCGVKLQNKQPGALGYYTKKDDNL--VKKITLEDVKYLI-FGQDIQRIKEMTVD 69
Query: 140 AENETSEVKKHEKPVVCARCHALRHYGK-----VKDVTVENL-------------LPDFD 181
EN ++ EKP++C RC H K KD+ E + P +
Sbjct: 70 TENYDIKL---EKPLICKRCSEALHNNKYNATEFKDIPFEEVEKQIPLHSNVVHTAPILE 126
Query: 182 FDHTVGRKLMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVP 241
F + +L+ + MV AD R +K K
Sbjct: 127 FPFHINSQLLKNRTFNTT--MVFTKAD---------------------RVFKNKKQ---- 159
Query: 242 RVVLVVTKIDLLPSSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVD 301
V +I + + FE ++ +A + ++ S + W L +L +
Sbjct: 160 ----VQKQIPIFLDAF----FETYLNSKATRNIVT--------STLNRWNLDTLFSFL-- 201
Query: 302 LAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAG--RGGD 337
G + +G N+GKSTL+NA+ + + RG D
Sbjct: 202 ----HGTNYFVGEPNSGKSTLINALLRRLFGVKIRGND 235
>sp|Q8G1P9|ERA_BRUSU GTPase Era OS=Brucella suis biovar 1 (strain 1330) GN=era PE=3 SV=1
Length = 311
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 46/89 (51%), Gaps = 23/89 (25%)
Query: 305 KRGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVR--- 361
+ G V IGA NAGKSTL+N + G + +IV+H + TT +VR
Sbjct: 18 RSGFVALIGAPNAGKSTLVNQLV----------GTKVSIVTHKVQ-----TTRALVRGIF 62
Query: 362 VEGVLPAQAKLFDTPGLLHPNQITTRLTR 390
+EG PAQ L DTPG+ P + RL R
Sbjct: 63 IEG--PAQIVLVDTPGIFRPKR---RLDR 86
>sp|Q8YG75|ERA_BRUME GTPase Era OS=Brucella melitensis biotype 1 (strain 16M / ATCC
23456 / NCTC 10094) GN=era PE=3 SV=1
Length = 311
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 46/89 (51%), Gaps = 23/89 (25%)
Query: 305 KRGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVR--- 361
+ G V IGA NAGKSTL+N + G + +IV+H + TT +VR
Sbjct: 18 RSGFVALIGAPNAGKSTLVNQLV----------GTKVSIVTHKVQ-----TTRALVRGIF 62
Query: 362 VEGVLPAQAKLFDTPGLLHPNQITTRLTR 390
+EG PAQ L DTPG+ P + RL R
Sbjct: 63 IEG--PAQIVLVDTPGIFRPKR---RLDR 86
>sp|E7KI83|GEP3_YEASA Genetic interactor of prohibitins 3, mitochondrial OS=Saccharomyces
cerevisiae (strain AWRI796) GN=GEP3 PE=3 SV=1
Length = 596
Score = 41.6 bits (96), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 95/263 (36%), Gaps = 69/263 (26%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C C + +QD +P PGY+ +P +S+ + L+ ++F + +
Sbjct: 24 CASCSIKLQDQDPSKPGYYTKPKS-------------LPDSKLNPDLQDLKYLLFSQDIQ 70
Query: 144 TSEVKKHEKP-----------VVCARC-HALRHYGKVKDVTVENLLPDFDFDHTVGRKLM 191
S+ P V+C RC +AL H N P+ +F + ++
Sbjct: 71 LSKQAIQNDPDLKTKRDLLLRVICKRCSNALHH---------NNYNPE-EFPESTLNDIL 120
Query: 192 SASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKID 251
+ S V+ +V +F V K N LV+TK D
Sbjct: 121 NYVPRGSNVMHIVPFVEFPLHLDPNVLKR------------------NDLETTLVLTKSD 162
Query: 252 LL------PSSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGK 305
+ S P + +++ R D K +SA+KNW + +
Sbjct: 163 QVFKDKNAVSKKVPIFMKQFLKNTLRIDS----NKTFAISALKNWNISMFYNYF------ 212
Query: 306 RGNVWAIGAQNAGKSTLLNAIAK 328
+ + +G N GKSTL+N + +
Sbjct: 213 KNYTYLLGNPNVGKSTLINTLLQ 235
>sp|Q08622|GEP3_YEAST Genetic interactor of prohibitins 3, mitochondrial OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=GEP3 PE=1
SV=1
Length = 556
Score = 41.6 bits (96), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 95/263 (36%), Gaps = 69/263 (26%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C C + +QD +P PGY+ +P +S+ + L+ ++F + +
Sbjct: 24 CASCSIKLQDQDPSKPGYYTKPKS-------------LPDSKLNPDLQDLKYLLFSQDIQ 70
Query: 144 TSEVKKHEKP-----------VVCARC-HALRHYGKVKDVTVENLLPDFDFDHTVGRKLM 191
S+ P V+C RC +AL H N P+ +F + ++
Sbjct: 71 LSKQATQNDPDLKTKRDLLLRVICKRCSNALHH---------NNYNPE-EFPESTLNDIL 120
Query: 192 SASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKID 251
+ S V+ +V +F V K N LV+TK D
Sbjct: 121 NYVPRGSNVMHIVPFVEFPLHLDPNVLKR------------------NDLDTTLVLTKSD 162
Query: 252 LL------PSSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGK 305
+ S P + +++ R D K +SA+KNW + +
Sbjct: 163 QVFKDKNAVSKKVPIFMKQFLKNTLRIDS----NKTFAISALKNWNISMFYNYF------ 212
Query: 306 RGNVWAIGAQNAGKSTLLNAIAK 328
+ + +G N GKSTL+N + +
Sbjct: 213 KNYTYLLGNPNVGKSTLINTLLQ 235
>sp|C8ZGW1|GEP3_YEAS8 Genetic interactor of prohibitins 3, mitochondrial OS=Saccharomyces
cerevisiae (strain Lalvin EC1118 / Prise de mousse)
GN=GEP3 PE=3 SV=1
Length = 556
Score = 41.6 bits (96), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 95/263 (36%), Gaps = 69/263 (26%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C C + +QD +P PGY+ +P +S+ + L+ ++F + +
Sbjct: 24 CASCSIKLQDQDPSKPGYYTKPKS-------------LPDSKLNPDLQDLKYLLFSQDIQ 70
Query: 144 TSEVKKHEKP-----------VVCARC-HALRHYGKVKDVTVENLLPDFDFDHTVGRKLM 191
S+ P V+C RC +AL H N P+ +F + ++
Sbjct: 71 LSKQAIQNDPDLKTKRDLLLRVICKRCSNALHH---------NNYNPE-EFPESTLNDIL 120
Query: 192 SASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKID 251
+ S V+ +V +F V K N LV+TK D
Sbjct: 121 NYVPRGSNVMHIVPFVEFPLHLDPNVLKR------------------NDLETTLVLTKSD 162
Query: 252 LL------PSSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGK 305
+ S P + +++ R D K +SA+KNW + +
Sbjct: 163 QVFKDKNAVSKKVPIFMKQFLKNTLRIDS----NKTFAISALKNWNISMFYNYF------ 212
Query: 306 RGNVWAIGAQNAGKSTLLNAIAK 328
+ + +G N GKSTL+N + +
Sbjct: 213 KNYTYLLGNPNVGKSTLINTLLQ 235
>sp|C7GWH7|GEP3_YEAS2 Genetic interactor of prohibitins 3, mitochondrial OS=Saccharomyces
cerevisiae (strain JAY291) GN=GEP3 PE=3 SV=1
Length = 556
Score = 40.8 bits (94), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 95/263 (36%), Gaps = 69/263 (26%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C C + +QD +P PGY+ +P +S+ + L+ ++F + +
Sbjct: 24 CASCSIKLQDQDPSKPGYYTKPKS-------------LPDSKLNPDLQDLKYLLFSQDIQ 70
Query: 144 TSEVKKHEKP-----------VVCARC-HALRHYGKVKDVTVENLLPDFDFDHTVGRKLM 191
S+ P V+C RC +AL H N P+ +F + ++
Sbjct: 71 LSKQAIQNDPDLKTKRDLLLRVICKRCSNALHH---------NNYNPE-EFPESTLNDIL 120
Query: 192 SASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKID 251
+ S V+ +V +F V K N LV+TK D
Sbjct: 121 NYVPRGSNVMHIVPFVEFPLHLDPNVLKR------------------NDLDTTLVLTKSD 162
Query: 252 LL------PSSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGK 305
+ S P + +++ R D K +SA+KNW + +
Sbjct: 163 QVFKDKNAVSKKVPIFMKQFLKNTLRIDS----NKTFAISALKNWNISMFYNYF------ 212
Query: 306 RGNVWAIGAQNAGKSTLLNAIAK 328
+ + +G N GKSTL+N + +
Sbjct: 213 KNYTYLLGNPNVGKSTLINTLLQ 235
>sp|B3LJN0|GEP3_YEAS1 Genetic interactor of prohibitins 3, mitochondrial OS=Saccharomyces
cerevisiae (strain RM11-1a) GN=GEP3 PE=3 SV=1
Length = 556
Score = 40.8 bits (94), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 95/263 (36%), Gaps = 69/263 (26%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C C + +QD +P PGY+ +P +S+ + L+ ++F + +
Sbjct: 24 CASCSIKLQDQDPSKPGYYTKPKS-------------LPDSKLNPDLQDLKYLLFSQDIQ 70
Query: 144 TSEVKKHEKP-----------VVCARC-HALRHYGKVKDVTVENLLPDFDFDHTVGRKLM 191
S+ P V+C RC +AL H N P+ +F + ++
Sbjct: 71 LSKQAIQNDPDLKTKRDLLLRVICKRCSNALHH---------NNYNPE-EFPESTLNDIL 120
Query: 192 SASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKID 251
+ S V+ +V +F V K N LV+TK D
Sbjct: 121 NYVPRGSNVMHIVPFVEFPLHLDPNVLKR------------------NDLDTTLVLTKSD 162
Query: 252 LL------PSSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGK 305
+ S P + +++ R D K +SA+KNW + +
Sbjct: 163 QVFKDKNAVSKKVPIFMKQFLKNTLRIDS----NKTFAISALKNWNISMFYNYF------ 212
Query: 306 RGNVWAIGAQNAGKSTLLNAIAK 328
+ + +G N GKSTL+N + +
Sbjct: 213 KNYTYLLGNPNVGKSTLINTLLQ 235
>sp|B5VS87|GEP3_YEAS6 Genetic interactor of prohibitins 3, mitochondrial OS=Saccharomyces
cerevisiae (strain AWRI1631) GN=GEP3 PE=3 SV=1
Length = 556
Score = 40.8 bits (94), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 95/263 (36%), Gaps = 69/263 (26%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C C + +QD +P PGY+ +P +S+ + L+ ++F + +
Sbjct: 24 CASCSIKLQDQDPSKPGYYTKPKS-------------LPDSKLNPDLQDLKYLLFSQDIQ 70
Query: 144 TSEVKKHEKP-----------VVCARC-HALRHYGKVKDVTVENLLPDFDFDHTVGRKLM 191
S+ P V+C RC +AL H N P+ +F + ++
Sbjct: 71 LSKQAIQNDPDLKTKRDLLLRVICKRCSNALHH---------NNYNPE-EFPESTLNDIL 120
Query: 192 SASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKID 251
+ S V+ +V +F V K N LV+TK D
Sbjct: 121 NYVPRGSNVMHIVPFVEFPLHLDPNVLKR------------------NDLDTTLVLTKSD 162
Query: 252 LL------PSSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGK 305
+ S P + +++ R D K +SA+KNW + +
Sbjct: 163 QVFKDKNAVSKKVPIFMKQFLKNTLRIDS----NKTFAISALKNWNISMFYNYF------ 212
Query: 306 RGNVWAIGAQNAGKSTLLNAIAK 328
+ + +G N GKSTL+N + +
Sbjct: 213 KNYTYLLGNPNVGKSTLINTLLQ 235
>sp|E7QKV3|GEP3_YEASZ Genetic interactor of prohibitins 3, mitochondrial OS=Saccharomyces
cerevisiae (strain Zymaflore VL3) GN=GEP3 PE=3 SV=1
Length = 556
Score = 40.8 bits (94), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 95/263 (36%), Gaps = 69/263 (26%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C C + +QD +P PGY+ +P +S+ + L+ ++F + +
Sbjct: 24 CASCSIKLQDQDPSKPGYYTKPKS-------------LPDSKLNPDLQDLKYLLFSQDIQ 70
Query: 144 TSEVKKHEKP-----------VVCARC-HALRHYGKVKDVTVENLLPDFDFDHTVGRKLM 191
S+ P V+C RC +AL H N P+ +F + ++
Sbjct: 71 LSKQAIQNDPDLKTKRDLLLRVICKRCSNALHH---------NNYNPE-EFPESTLNDIL 120
Query: 192 SASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKID 251
+ S V+ +V +F V K N LV+TK D
Sbjct: 121 NYVPRGSNVMHIVPFVEFPLHLDPNVLKR------------------NDLDTTLVLTKSD 162
Query: 252 LL------PSSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGK 305
+ S P + +++ R D K +SA+KNW + +
Sbjct: 163 QVFKDKNAVSKKVPIFMKQFLKNTLRIDS----NKTFAISALKNWNISMFYNYF------ 212
Query: 306 RGNVWAIGAQNAGKSTLLNAIAK 328
+ + +G N GKSTL+N + +
Sbjct: 213 KNYTYLLGNPNVGKSTLINTLLQ 235
>sp|A6ZP48|GEP3_YEAS7 Genetic interactor of prohibitins 3, mitochondrial OS=Saccharomyces
cerevisiae (strain YJM789) GN=GEP3 PE=3 SV=1
Length = 556
Score = 40.8 bits (94), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 95/263 (36%), Gaps = 69/263 (26%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C C + +QD +P PGY+ +P +S+ + L+ ++F + +
Sbjct: 24 CASCSIKLQDQDPSKPGYYTKPKS-------------LPDSKLNPDLQDLKYLLFSQDIQ 70
Query: 144 TSEVKKHEKP-----------VVCARC-HALRHYGKVKDVTVENLLPDFDFDHTVGRKLM 191
S+ P V+C RC +AL H N P+ +F + ++
Sbjct: 71 LSKQAIQNDPDLKTKRDLLLRVICKRCSNALHH---------NNYNPE-EFPESTLNDIL 120
Query: 192 SASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKID 251
+ S V+ +V +F V K N LV+TK D
Sbjct: 121 NYVPRGSNVMHIVPFVEFPLHLDPNVLKR------------------NDLDTTLVLTKSD 162
Query: 252 LL------PSSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGK 305
+ S P + +++ R D K +SA+KNW + +
Sbjct: 163 QVFKDKNAVSKKVPIFMKQFLKNTLRIDS----NKTFAISALKNWNISMFYNYF------ 212
Query: 306 RGNVWAIGAQNAGKSTLLNAIAK 328
+ + +G N GKSTL+N + +
Sbjct: 213 KNYTYLLGNPNVGKSTLINTLLQ 235
>sp|B9KZ43|DER_THERP GTPase Der OS=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159
/ P-2) GN=der PE=3 SV=1
Length = 460
Score = 40.8 bits (94), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 51/118 (43%), Gaps = 26/118 (22%)
Query: 284 VSAVKNWGLKSLIDDVVDLAGKRGN----------VWAIGAQNAGKSTLLNAIAKSVDAG 333
VSA+ G+ L+D + + +R + +G N GKS LLNAI
Sbjct: 151 VSALHGRGIADLLDAIAERLPRREEDGTAEAEAPKIAIVGRPNVGKSALLNAIL------ 204
Query: 334 RGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQ-AKLFDTPGLLHPNQITTRLTR 390
G+ + IVS P+PGTT V E V Q L DT G+ P +I + R
Sbjct: 205 ----GQPRQIVS-----PIPGTTRDAVDTELVWKGQPIVLIDTAGIRRPGRIERGIER 253
>sp|A0Q125|DER_CLONN GTPase Der OS=Clostridium novyi (strain NT) GN=der PE=3 SV=1
Length = 438
Score = 40.8 bits (94), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 85/210 (40%), Gaps = 65/210 (30%)
Query: 198 SVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSL 257
VVL +VD R+VA M+ K KS +VL V KID
Sbjct: 85 DVVLFIVDGKQGLTDADREVAHMLR----------KASKS-----IVLAVNKID------ 123
Query: 258 SPTRFEHWVRQRAREDGISKITKLHF-----VSAVKNWGLKSLIDDVVDLAGKRGNVW-- 310
+R +D I + L +SA + GL L+D+V++ GNV
Sbjct: 124 ----------RRQLDDNIYEFYNLGLGDPMPISASQGLGLGDLLDEVIE-KFPEGNVEEE 172
Query: 311 --------AIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRV 362
IG N GKS+L+N I GEEK+IVS+ +PGTT V
Sbjct: 173 EDEYIRIAMIGRPNVGKSSLINKIL----------GEEKHIVSN-----IPGTTRDAVD- 216
Query: 363 EGVLPAQAK--LFDTPGLLHPNQITTRLTR 390
V + K L DT GL ++I ++ R
Sbjct: 217 SYVETEEGKFVLIDTAGLRRKSKIKEQVER 246
>sp|O14236|NOG2_SCHPO Nucleolar GTP-binding protein 2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=nog2 PE=1 SV=1
Length = 537
Score = 40.4 bits (93), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 70/145 (48%), Gaps = 32/145 (22%)
Query: 243 VVLVVTKIDLLPSSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKN-WGLKSLIDDVVD 301
++LV+ K+DL+P+S++ WV+ A+E + F +++ N +G SLI +
Sbjct: 250 MILVLNKVDLVPTSVAAA----WVKILAKE-----YPTIAFHASINNSFGKGSLIQILRQ 300
Query: 302 LAG-----KRGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTT 356
A K+ +V IG NAGKS+++N + K K + + AP+PG T
Sbjct: 301 FASLHSDKKQISVGLIGFPNAGKSSIINTLRK------------KKVCNV---APIPGET 345
Query: 357 LGIVRVEGVLPAQAKLFDTPGLLHP 381
V L + L D PG++ P
Sbjct: 346 KVWQYV--ALMKRIFLIDCPGIVPP 368
>sp|Q30YQ7|MNME_DESDG tRNA modification GTPase MnmE OS=Desulfovibrio desulfuricans
(strain G20) GN=mnmE PE=3 SV=1
Length = 468
Score = 40.0 bits (92), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 81/196 (41%), Gaps = 42/196 (21%)
Query: 217 VAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRAREDGIS 276
VA+M++ A E R + G + R I+ L L R + V ED +
Sbjct: 139 VAEMIAAPAAEGVRLAQARLDGMLGR------HINALRERLELVRVQLCVAVDFPEDEVE 192
Query: 277 KITKLHFVSAVKNWG--LKSLIDDVVDLAGKRGNVWAIGAQ-------NAGKSTLLNAIA 327
+ F+ AV+ ++ LI + +R W GAQ NAGKS+LLNA+
Sbjct: 193 CLAPADFMHAVEETADAIRKLIGNY-----ERARCWREGAQVVLAGQVNAGKSSLLNALL 247
Query: 328 KSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQA-KLFDTPGLLHPNQITT 386
G ++ IV+ VPGTT + L A +L DT GL I
Sbjct: 248 ----------GRKRAIVTD-----VPGTTRDFLEESITLDGLAVRLVDTAGLRETGDIV- 291
Query: 387 RLTREEQKLVNINKEL 402
EQ+ V ++++L
Sbjct: 292 -----EQEGVRMSRDL 302
>sp|P40010|NUG1_YEAST Nuclear GTP-binding protein NUG1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=NUG1 PE=1 SV=1
Length = 520
Score = 40.0 bits (92), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 93/215 (43%), Gaps = 63/215 (29%)
Query: 196 ARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPS 255
A V+L V+DA D + + RKV + V + +GK R++L++ K+DL+P
Sbjct: 175 ASDVILYVLDARDPESTRSRKVEEAVLQS---------QGK-----RLILILNKVDLIP- 219
Query: 256 SLSPTRFEHWVRQ----------RAREDGIS------KITKLHFVSAVKNWGLKSLIDDV 299
P E W+ RA ++ K+++ SA+ L+SL
Sbjct: 220 ---PHVLEQWLNYLKSSFPTIPLRASSGAVNGTSFNRKLSQTTTASAL----LESLKTYS 272
Query: 300 VDLAGKRG-NVWAIGAQNAGKSTLLNAIAKSVDAGRGGD------GEEKNIVSHLTEAPV 352
+ KR V IG N GKS+++NA+ A RGG G E + + L E
Sbjct: 273 NNSNLKRSIVVGVIGYPNVGKSSVINALL----ARRGGQSKACPVGNEAGVTTSLRE--- 325
Query: 353 PGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTR 387
++++ L K+ D+PG+ P++ R
Sbjct: 326 -------IKIDNKL----KILDSPGICFPSENKKR 349
>sp|Q9PG37|DER_XYLFA GTPase Der OS=Xylella fastidiosa (strain 9a5c) GN=der PE=3 SV=1
Length = 465
Score = 39.7 bits (91), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 110/266 (41%), Gaps = 51/266 (19%)
Query: 133 GGLVVFEAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRK-LM 191
G +F A T + H++P V RHYG + + + L D VG++ +
Sbjct: 14 GKSTLFNALTLTRDALVHDQPGVTRD----RHYGVCR-IDGQPLFAVVDTGGMVGKEDGL 68
Query: 192 SASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKID 251
+ + AR L +A F V + VS +++ AW S +LV+ KID
Sbjct: 69 AGATARQARLAAAEADVV--LFVVNVREGVS-ALDDDILAWLRKLSQPT---LLVINKID 122
Query: 252 LLPSSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRG---- 307
+ + + F H+ G S + VSA GL LI+ V+ +RG
Sbjct: 123 GVSDATVHSEFAHY--------GFSDVVP---VSAAHRQGLDDLIEQVLAWLPERGIGEA 171
Query: 308 --------NVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGI 359
++ +G N GKSTL+N + GEE+ IVS VPGTT
Sbjct: 172 LDEDSERIHIAFVGRPNVGKSTLVNRLL----------GEERMIVS-----DVPGTTRDS 216
Query: 360 VRVEGVL-PAQAKLFDTPGLLHPNQI 384
+ V+ + +L DT GL +++
Sbjct: 217 ITVDLERDECRYRLVDTAGLRRKSKV 242
>sp|Q9TLX6|MNME_CYACA Probable tRNA modification GTPase mnmE OS=Cyanidium caldarium
GN=mnmE PE=3 SV=1
Length = 465
Score = 39.3 bits (90), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 37/71 (52%), Gaps = 16/71 (22%)
Query: 309 VWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVL-P 367
V IG N GKS+LLNAIAK E +IV++ PGTT IV E +L
Sbjct: 224 VCIIGKPNVGKSSLLNAIAK----------RECSIVTNF-----PGTTRDIVSFETMLGN 268
Query: 368 AQAKLFDTPGL 378
+L+DT G+
Sbjct: 269 TLVRLYDTAGI 279
>sp|B3ETH9|MNME_AMOA5 tRNA modification GTPase MnmE OS=Amoebophilus asiaticus (strain
5a2) GN=mnmE PE=3 SV=1
Length = 455
Score = 39.3 bits (90), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 47/101 (46%), Gaps = 29/101 (28%)
Query: 292 LKSLIDDVVDLAGKR------GNVW-------AIGAQNAGKSTLLNAIAKSVDAGRGGDG 338
L+SLI +++ + GK GNV +G N GKSTLLNA+ +
Sbjct: 192 LESLIQELLTIIGKLIQSFSLGNVIKNGLPIAIVGKPNVGKSTLLNALLQ---------- 241
Query: 339 EEKNIVSHLTEAPVPGTTLGIVRVE-GVLPAQAKLFDTPGL 378
EE+ IVS P+PGTT + E + + DT GL
Sbjct: 242 EERAIVS-----PIPGTTRDFIEAEINIGGIHCRFIDTAGL 277
>sp|Q92KW1|MNME_RHIME tRNA modification GTPase MnmE OS=Rhizobium meliloti (strain 1021)
GN=mnmE PE=3 SV=2
Length = 439
Score = 39.3 bits (90), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 72/166 (43%), Gaps = 40/166 (24%)
Query: 251 DLLPSSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVW 310
D +P S+S +E R R DG H A GL +I D + +
Sbjct: 180 DDVPGSVSAVIWEDVGRLRQEIDG-------HIARA----GLAEIIRDGL-------KIV 221
Query: 311 AIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPA-Q 369
G NAGKS+LLNA+A + ++ +TE V GTT ++ V+ L
Sbjct: 222 IAGEPNAGKSSLLNALA-------------RRDIAIVTE--VAGTTRDVLSVDLSLAGFS 266
Query: 370 AKLFDTPGLLHPNQITTR--LTREEQKLVNINKEL----KPRTYRI 409
KLFDT GL +++ R + R Q + + + L KP +RI
Sbjct: 267 VKLFDTAGLRETDELVEREGIRRARQVIADADLVLLLSEKPGHFRI 312
>sp|A8I264|MNME_AZOC5 tRNA modification GTPase MnmE OS=Azorhizobium caulinodans (strain
ATCC 43989 / DSM 5975 / ORS 571) GN=mnmE PE=3 SV=1
Length = 435
Score = 38.9 bits (89), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 41/82 (50%), Gaps = 17/82 (20%)
Query: 305 KRGNVWAI-GAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVE 363
+ G + AI G NAGKSTLLN +A G E IVS PVPGTT ++ V
Sbjct: 217 RDGFIIAIAGPPNAGKSTLLNRLA----------GREAAIVS-----PVPGTTRDVLEVH 261
Query: 364 GVLPAQA-KLFDTPGLLHPNQI 384
L QA L DT GL + +
Sbjct: 262 LHLAGQAVTLVDTAGLRETDDL 283
>sp|A5E047|GEP3_LODEL Genetic interactor of prohibitins 3, mitochondrial OS=Lodderomyces
elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 /
NBRC 1676 / NRRL YB-4239) GN=GEP3 PE=3 SV=1
Length = 665
Score = 38.9 bits (89), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 11/54 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVV 137
C CG+ +QD N PGY+I+P + LN + FS +K GLVV
Sbjct: 33 CRSCGIKVQDKNKDEPGYYIKPVKLLN-----------DSKTFSEQTQKLGLVV 75
>sp|A6U7A9|ERA_SINMW GTPase Era OS=Sinorhizobium medicae (strain WSM419) GN=era PE=3
SV=1
Length = 310
Score = 38.9 bits (89), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 42/87 (48%), Gaps = 19/87 (21%)
Query: 305 KRGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEG 364
+ G V IGA NAGKSTL+N + G + +IVSH + TT IVR
Sbjct: 17 RSGFVALIGATNAGKSTLINRLV----------GAKVSIVSHKVQ-----TTRAIVRGIA 61
Query: 365 VLP-AQAKLFDTPGLLHPNQITTRLTR 390
+ AQ DTPG+ P + RL R
Sbjct: 62 IHDNAQIVFMDTPGIFKPRR---RLDR 85
>sp|C0QT02|DER_PERMH GTPase Der OS=Persephonella marina (strain DSM 14350 / EX-H1)
GN=der PE=3 SV=1
Length = 447
Score = 38.5 bits (88), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 59/130 (45%), Gaps = 38/130 (29%)
Query: 272 EDGISKITKLHF-----VSAVKNWGLKSLIDDVV-DL----------AGKRGN------V 309
E I + +L F VS+++ +G+ L+D VV D+ G++ V
Sbjct: 126 EKAIYEFYELGFEKVFPVSSIQKYGVADLLDAVVQDIPEYEREASKEVGEKEEKSDVIKV 185
Query: 310 WAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQ 369
+G NAGKS+LLNAI GEE+ +VS +PGTT +V Q
Sbjct: 186 AIVGKPNAGKSSLLNAIL----------GEERAVVSE-----IPGTTRDVVDTLFEWKDQ 230
Query: 370 AKLF-DTPGL 378
LF DT GL
Sbjct: 231 KFLFLDTAGL 240
>sp|Q85FG3|MNME_CYAME Probable tRNA modification GTPase mnmE OS=Cyanidioschyzon merolae
GN=mnmE PE=3 SV=1
Length = 446
Score = 38.5 bits (88), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 36/70 (51%), Gaps = 20/70 (28%)
Query: 312 IGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQA- 370
+G NAGKSTL NA+ GEE++IV+ P+ GTT + VE L Q
Sbjct: 224 LGPANAGKSTLFNALI----------GEERSIVT-----PIAGTTTDV--VEATLQWQQI 266
Query: 371 --KLFDTPGL 378
+ FDT GL
Sbjct: 267 CFRFFDTAGL 276
>sp|Q92R46|ERA_RHIME GTPase Era OS=Rhizobium meliloti (strain 1021) GN=era PE=3 SV=1
Length = 313
Score = 38.5 bits (88), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 43/89 (48%), Gaps = 23/89 (25%)
Query: 305 KRGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVR--- 361
+ G V IGA NAGKSTL+N + G + +IVSH + TT I+R
Sbjct: 20 RSGFVALIGATNAGKSTLVNRLV----------GAKVSIVSHKVQ-----TTRAIIRGIA 64
Query: 362 VEGVLPAQAKLFDTPGLLHPNQITTRLTR 390
+ G AQ DTPG+ P + RL R
Sbjct: 65 IHG--SAQIVFMDTPGIFKPRR---RLDR 88
>sp|A8Z608|DER_SULMW GTPase Der OS=Sulcia muelleri (strain GWSS) GN=der PE=3 SV=1
Length = 433
Score = 38.5 bits (88), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 85/206 (41%), Gaps = 50/206 (24%)
Query: 182 FDHTVGRKLMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVP 241
FD + + + A V+L +VD ++ ++ + ++R K KS
Sbjct: 68 FDKKICEQFLFALAESDVILFLVDPSN----------DILGIDYDISKRIRKLKKS---- 113
Query: 242 RVVLVVTKIDLLPSSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVD 301
+ LV+ KID+ + + ++ + ITK + +S++ G + L+D +V
Sbjct: 114 -IYLVINKIDIYKNIYNTYKYCKF-----------GITKTYCISSINGTGTEKLLDSIVS 161
Query: 302 LAGKRGNVW--------AIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVP 353
K ++ +G N GKSTL+N + + KNIV++++
Sbjct: 162 NFDKNIKIYKKNIPRIAIVGRPNVGKSTLINTLL----------NKNKNIVTNIS----- 206
Query: 354 GTTLGIVRV-EGVLPAQAKLFDTPGL 378
GTT + V + L DT G+
Sbjct: 207 GTTRDSIDVLYSKFGIECILVDTAGI 232
>sp|Q3ANQ3|MNME_CHLCH tRNA modification GTPase MnmE OS=Chlorobium chlorochromatii (strain
CaD3) GN=mnmE PE=3 SV=1
Length = 473
Score = 37.7 bits (86), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 16/68 (23%)
Query: 312 IGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQA- 370
+G+ NAGKSTLLNA+ GEE++IVSH PGTT + +L +
Sbjct: 234 VGSPNAGKSTLLNALL----------GEERSIVSH-----QPGTTRDYIEEPLLLGSTLF 278
Query: 371 KLFDTPGL 378
+L DT GL
Sbjct: 279 RLIDTAGL 286
>sp|Q9JXL4|MNME_NEIMB tRNA modification GTPase MnmE OS=Neisseria meningitidis serogroup B
(strain MC58) GN=mnmE PE=3 SV=1
Length = 448
Score = 37.4 bits (85), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 28/114 (24%)
Query: 291 GLKSLIDDVVDLAGKRG------NVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIV 344
GL+ +DDV+ A + NV +GA N GKS+LLNA+A G+E IV
Sbjct: 195 GLRRAVDDVLANAQQGAILREGLNVVLVGAPNVGKSSLLNALA----------GDEVAIV 244
Query: 345 SHLTEAPVPGTTLGIVR----VEGVLPAQAKLFDTPGLLHPNQITTRLTREEQK 394
+ + GTT VR ++GV P + DT GL + + R+ E +
Sbjct: 245 TD-----IAGTTRDAVRERILIDGV-PVH--IVDTAGLRETDDVVERIGIERSR 290
>sp|A1KW66|MNME_NEIMF tRNA modification GTPase MnmE OS=Neisseria meningitidis serogroup C
/ serotype 2a (strain ATCC 700532 / FAM18) GN=mnmE PE=3
SV=1
Length = 448
Score = 37.4 bits (85), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 28/114 (24%)
Query: 291 GLKSLIDDVVDLAGKRG------NVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIV 344
GL+ +DDV+ A + NV +GA N GKS+LLNA+A G+E IV
Sbjct: 195 GLRRAVDDVLANAQQGAILREGLNVVLVGAPNVGKSSLLNALA----------GDEVAIV 244
Query: 345 SHLTEAPVPGTTLGIVR----VEGVLPAQAKLFDTPGLLHPNQITTRLTREEQK 394
+ + GTT VR ++GV P + DT GL + + R+ E +
Sbjct: 245 TD-----IAGTTRDAVRERILIDGV-PVH--IVDTAGLRETDDVVERIGIERSR 290
>sp|A5I4V0|DER_CLOBH GTPase Der OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC
13319 / Type A) GN=der PE=3 SV=1
Length = 439
Score = 37.4 bits (85), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 69/159 (43%), Gaps = 38/159 (23%)
Query: 243 VVLVVTKIDLLPSSLSPTRFEHWVRQRAREDGISK-ITKLHFVSAVKNWGLKSLIDDVVD 301
VVLVV KID L + F + GI +T +S+ + GL ++D VV+
Sbjct: 115 VVLVVNKIDKLKDENNAYEFYNL--------GIGDPVT----ISSSQALGLGDMLDRVVE 162
Query: 302 L------AGK---RGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPV 352
AG+ R N+ IG N GKS+L+N + GEE+ IVS +
Sbjct: 163 YFKDDESAGEDDERINIAFIGKPNVGKSSLINKLL----------GEERLIVSD-----I 207
Query: 353 PGTTL-GIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTR 390
PGTT I + L DT GL +++ + R
Sbjct: 208 PGTTRDSIDSYVDTDFGEFTLIDTAGLRRKSKVKEEIER 246
>sp|A7FW89|DER_CLOB1 GTPase Der OS=Clostridium botulinum (strain ATCC 19397 / Type A)
GN=der PE=3 SV=1
Length = 439
Score = 37.4 bits (85), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 69/159 (43%), Gaps = 38/159 (23%)
Query: 243 VVLVVTKIDLLPSSLSPTRFEHWVRQRAREDGISK-ITKLHFVSAVKNWGLKSLIDDVVD 301
VVLVV KID L + F + GI +T +S+ + GL ++D VV+
Sbjct: 115 VVLVVNKIDKLKDENNAYEFYNL--------GIGDPVT----ISSSQALGLGDMLDRVVE 162
Query: 302 L------AGK---RGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPV 352
AG+ R N+ IG N GKS+L+N + GEE+ IVS +
Sbjct: 163 YFKDDESAGEDDERINIAFIGKPNVGKSSLINKLL----------GEERLIVSD-----I 207
Query: 353 PGTTL-GIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTR 390
PGTT I + L DT GL +++ + R
Sbjct: 208 PGTTRDSIDSYVDTDFGEFTLIDTAGLRRKSKVKEEIER 246
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.131 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 154,441,418
Number of Sequences: 539616
Number of extensions: 6605043
Number of successful extensions: 29239
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 347
Number of HSP's that attempted gapping in prelim test: 28979
Number of HSP's gapped (non-prelim): 592
length of query: 413
length of database: 191,569,459
effective HSP length: 120
effective length of query: 293
effective length of database: 126,815,539
effective search space: 37156952927
effective search space used: 37156952927
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 62 (28.5 bits)