Query 015088
Match_columns 413
No_of_seqs 267 out of 2877
Neff 10.5
Searched_HMMs 29240
Date Mon Mar 25 06:28:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015088.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015088hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3nyc_A D-arginine dehydrogenas 100.0 6.1E-46 2.1E-50 348.7 35.3 365 5-392 7-380 (381)
2 2gf3_A MSOX, monomeric sarcosi 100.0 1.4E-45 4.9E-50 347.1 36.8 372 7-394 3-381 (389)
3 1y56_B Sarcosine oxidase; dehy 100.0 3.3E-45 1.1E-49 343.8 37.7 373 4-401 2-379 (382)
4 2oln_A NIKD protein; flavoprot 100.0 4.5E-44 1.5E-48 337.7 40.7 368 6-394 3-391 (397)
5 2uzz_A N-methyl-L-tryptophan o 100.0 1.4E-44 4.7E-49 338.4 34.8 362 7-392 2-372 (372)
6 2gag_B Heterotetrameric sarcos 100.0 7.5E-42 2.6E-46 323.5 38.7 372 5-402 19-400 (405)
7 3axb_A Putative oxidoreductase 100.0 1.5E-41 5E-46 325.4 32.3 371 6-396 22-446 (448)
8 3dje_A Fructosyl amine: oxygen 100.0 1.2E-40 4.2E-45 318.2 35.3 369 1-391 1-398 (438)
9 3ps9_A TRNA 5-methylaminomethy 100.0 1.4E-40 4.8E-45 333.2 33.8 365 7-402 272-673 (676)
10 3pvc_A TRNA 5-methylaminomethy 100.0 1.7E-40 5.6E-45 332.9 34.0 364 7-403 264-678 (689)
11 1ryi_A Glycine oxidase; flavop 100.0 8.3E-41 2.9E-45 313.8 29.9 356 5-394 15-380 (382)
12 1pj5_A N,N-dimethylglycine oxi 100.0 3.2E-38 1.1E-42 322.9 36.1 372 6-395 3-397 (830)
13 3dme_A Conserved exported prot 100.0 1.5E-37 5.2E-42 290.2 34.0 345 6-374 3-368 (369)
14 3g3e_A D-amino-acid oxidase; F 100.0 8.2E-36 2.8E-40 276.4 17.0 312 8-375 1-332 (351)
15 3c4n_A Uncharacterized protein 100.0 4.3E-35 1.5E-39 276.4 19.3 325 6-377 35-398 (405)
16 1c0p_A D-amino acid oxidase; a 100.0 2E-33 6.7E-38 261.7 20.2 317 4-374 3-355 (363)
17 2qcu_A Aerobic glycerol-3-phos 100.0 1.5E-29 5.2E-34 244.6 32.7 342 7-375 3-371 (501)
18 2rgh_A Alpha-glycerophosphate 100.0 3.9E-29 1.3E-33 244.5 35.6 342 6-375 31-410 (571)
19 3da1_A Glycerol-3-phosphate de 100.0 1.9E-27 6.3E-32 232.2 30.0 342 6-375 17-390 (561)
20 3ihg_A RDME; flavoenzyme, anth 99.8 1.6E-16 5.4E-21 155.0 25.6 223 148-391 115-356 (535)
21 3nix_A Flavoprotein/dehydrogen 99.7 2E-17 6.8E-22 156.7 16.4 209 148-375 101-324 (421)
22 3cgv_A Geranylgeranyl reductas 99.7 3.6E-17 1.2E-21 153.7 13.9 287 7-374 4-312 (397)
23 3i6d_A Protoporphyrinogen oxid 99.7 4.8E-16 1.6E-20 149.4 18.3 207 153-374 235-465 (470)
24 3fmw_A Oxygenase; mithramycin, 99.7 2.4E-16 8.4E-21 153.8 15.1 221 148-393 143-379 (570)
25 3i3l_A Alkylhalidase CMLS; fla 99.7 3.3E-16 1.1E-20 153.1 14.4 210 147-375 122-344 (591)
26 2qa2_A CABE, polyketide oxygen 99.7 9.3E-15 3.2E-19 140.7 24.1 304 5-392 10-334 (499)
27 3ka7_A Oxidoreductase; structu 99.7 1.2E-15 4E-20 144.7 17.5 60 153-217 196-257 (425)
28 3rp8_A Flavoprotein monooxygen 99.7 5.9E-16 2E-20 145.8 15.0 161 6-214 22-182 (407)
29 2qa1_A PGAE, polyketide oxygen 99.7 1.1E-14 3.8E-19 140.2 23.5 310 4-392 8-333 (500)
30 3oz2_A Digeranylgeranylglycero 99.7 1.9E-16 6.5E-21 148.6 10.8 72 149-225 98-172 (397)
31 2weu_A Tryptophan 5-halogenase 99.6 7.6E-16 2.6E-20 149.4 13.0 215 147-387 167-386 (511)
32 3atr_A Conserved archaeal prot 99.6 1.2E-14 4.3E-19 138.6 19.7 200 148-374 95-317 (453)
33 3nrn_A Uncharacterized protein 99.6 4.9E-14 1.7E-18 133.3 23.0 56 152-213 188-243 (421)
34 3nks_A Protoporphyrinogen oxid 99.6 1.3E-14 4.4E-19 139.7 19.2 204 153-376 234-473 (477)
35 3v76_A Flavoprotein; structura 99.6 9.4E-15 3.2E-19 137.0 17.3 158 4-213 24-187 (417)
36 3e1t_A Halogenase; flavoprotei 99.6 9E-15 3.1E-19 141.6 15.6 177 1-223 1-180 (512)
37 3lov_A Protoporphyrinogen oxid 99.6 2.8E-14 9.5E-19 137.2 18.1 206 154-375 237-463 (475)
38 2gmh_A Electron transfer flavo 99.6 4.1E-14 1.4E-18 138.7 19.3 65 148-214 139-218 (584)
39 2aqj_A Tryptophan halogenase, 99.6 2.1E-14 7.1E-19 140.0 13.7 216 145-387 157-378 (538)
40 3alj_A 2-methyl-3-hydroxypyrid 99.6 1.4E-13 4.9E-18 128.2 17.8 65 148-220 102-166 (379)
41 2i0z_A NAD(FAD)-utilizing dehy 99.5 3.8E-14 1.3E-18 134.9 13.7 166 6-213 25-191 (447)
42 1y0p_A Fumarate reductase flav 99.5 4.6E-13 1.6E-17 131.3 21.9 181 6-214 125-318 (571)
43 1qo8_A Flavocytochrome C3 fuma 99.5 2.8E-13 9.6E-18 132.7 20.2 189 5-214 119-313 (566)
44 2dkh_A 3-hydroxybenzoate hydro 99.5 1.5E-13 5.2E-18 136.3 18.3 73 149-225 137-221 (639)
45 2e4g_A Tryptophan halogenase; 99.5 4.8E-14 1.7E-18 137.6 12.7 212 147-387 188-409 (550)
46 4dgk_A Phytoene dehydrogenase; 99.5 1.4E-13 5E-18 133.1 14.5 58 153-213 221-278 (501)
47 2gqf_A Hypothetical protein HI 99.5 1E-13 3.5E-18 129.6 12.9 157 7-213 4-168 (401)
48 2r0c_A REBC; flavin adenine di 99.5 2.5E-13 8.6E-18 132.4 15.0 70 149-227 134-208 (549)
49 3nlc_A Uncharacterized protein 99.5 1.2E-12 4E-17 126.2 18.7 174 7-226 107-292 (549)
50 1pn0_A Phenol 2-monooxygenase; 99.5 6.9E-12 2.4E-16 124.6 24.6 221 149-392 115-407 (665)
51 2wdq_A Succinate dehydrogenase 99.5 1.1E-12 3.9E-17 128.4 18.2 197 1-215 1-208 (588)
52 2x3n_A Probable FAD-dependent 99.5 3.9E-13 1.3E-17 126.2 13.9 71 148-224 102-175 (399)
53 4at0_A 3-ketosteroid-delta4-5a 99.5 3.3E-13 1.1E-17 130.6 13.2 58 154-213 203-264 (510)
54 1yvv_A Amine oxidase, flavin-c 99.4 7.1E-11 2.4E-15 108.0 26.0 40 8-47 3-42 (336)
55 2bs2_A Quinol-fumarate reducta 99.4 4.5E-12 1.5E-16 125.2 18.9 61 152-215 157-222 (660)
56 1k0i_A P-hydroxybenzoate hydro 99.4 3.4E-12 1.2E-16 119.6 17.1 61 151-214 101-164 (394)
57 2pyx_A Tryptophan halogenase; 99.4 4.1E-12 1.4E-16 123.4 18.1 65 147-214 169-234 (526)
58 4gde_A UDP-galactopyranose mut 99.4 7.1E-13 2.4E-17 128.7 12.4 49 1-49 4-53 (513)
59 1d4d_A Flavocytochrome C fumar 99.4 1.1E-11 3.7E-16 121.4 20.5 189 6-214 125-318 (572)
60 1chu_A Protein (L-aspartate ox 99.4 2.2E-12 7.7E-17 125.1 14.9 186 5-214 6-209 (540)
61 4a9w_A Monooxygenase; baeyer-v 99.4 1.3E-12 4.3E-17 120.6 12.6 136 7-220 3-139 (357)
62 3qj4_A Renalase; FAD/NAD(P)-bi 99.4 9.6E-13 3.3E-17 120.8 11.5 159 8-211 2-163 (342)
63 2h88_A Succinate dehydrogenase 99.4 8E-12 2.7E-16 122.6 17.6 189 6-215 17-219 (621)
64 2vou_A 2,6-dihydroxypyridine h 99.4 6.4E-12 2.2E-16 117.7 15.0 58 151-214 97-154 (397)
65 2bcg_G Secretory pathway GDP d 99.4 2.2E-12 7.5E-17 122.8 11.9 61 153-216 242-303 (453)
66 1kf6_A Fumarate reductase flav 99.4 1.2E-11 4.1E-16 121.4 17.1 188 5-215 3-199 (602)
67 1rp0_A ARA6, thiazole biosynth 99.4 1E-11 3.5E-16 110.6 14.5 157 6-233 38-216 (284)
68 2e5v_A L-aspartate oxidase; ar 99.3 2.4E-11 8E-16 116.1 17.4 174 9-214 1-177 (472)
69 3p1w_A Rabgdi protein; GDI RAB 99.3 2E-11 6.9E-16 115.1 16.5 65 143-212 249-313 (475)
70 3k7m_X 6-hydroxy-L-nicotine ox 99.3 1E-11 3.6E-16 117.7 14.5 42 8-49 2-43 (431)
71 3gwf_A Cyclohexanone monooxyge 99.3 5.8E-12 2E-16 122.1 12.5 145 6-220 7-154 (540)
72 4ap3_A Steroid monooxygenase; 99.3 2E-12 6.9E-17 125.6 9.2 145 6-220 20-166 (549)
73 3gyx_A Adenylylsulfate reducta 99.3 1.3E-11 4.5E-16 121.8 15.0 188 6-214 21-234 (662)
74 3uox_A Otemo; baeyer-villiger 99.3 6.5E-12 2.2E-16 121.9 11.9 148 5-222 7-156 (545)
75 3o0h_A Glutathione reductase; 99.3 1.9E-11 6.7E-16 117.4 14.7 59 152-214 231-289 (484)
76 2zbw_A Thioredoxin reductase; 99.3 2.5E-11 8.6E-16 111.0 13.9 119 5-213 3-121 (335)
77 1mo9_A ORF3; nucleotide bindin 99.3 4.5E-11 1.5E-15 115.9 16.3 69 152-223 254-327 (523)
78 1w4x_A Phenylacetone monooxyge 99.3 2.7E-11 9.3E-16 118.0 14.7 66 153-220 94-161 (542)
79 2xdo_A TETX2 protein; tetracyc 99.3 3.6E-11 1.2E-15 112.7 14.4 59 150-214 125-183 (398)
80 3lzw_A Ferredoxin--NADP reduct 99.3 1E-11 3.5E-16 113.3 10.2 117 6-212 6-122 (332)
81 3c96_A Flavin-containing monoo 99.3 6.2E-11 2.1E-15 111.5 15.7 61 149-214 103-170 (410)
82 2ywl_A Thioredoxin reductase r 99.3 6.1E-11 2.1E-15 98.0 13.8 65 151-223 54-118 (180)
83 2vvm_A Monoamine oxidase N; FA 99.3 5.8E-11 2E-15 114.6 15.7 57 153-213 255-312 (495)
84 2zxi_A TRNA uridine 5-carboxym 99.3 9.7E-12 3.3E-16 120.3 10.1 61 149-213 119-180 (637)
85 1s3e_A Amine oxidase [flavin-c 99.3 3.7E-11 1.3E-15 116.6 14.3 45 6-50 3-47 (520)
86 3ab1_A Ferredoxin--NADP reduct 99.3 3.9E-11 1.3E-15 110.8 13.4 119 6-213 13-131 (360)
87 3f8d_A Thioredoxin reductase ( 99.3 2.9E-11 1E-15 109.8 12.3 58 151-213 68-125 (323)
88 3ces_A MNMG, tRNA uridine 5-ca 99.3 4.5E-11 1.5E-15 116.1 14.1 61 149-213 120-181 (651)
89 3d1c_A Flavin-containing putat 99.3 1.9E-11 6.6E-16 113.3 10.9 60 150-214 85-144 (369)
90 2ivd_A PPO, PPOX, protoporphyr 99.3 3.2E-11 1.1E-15 115.9 12.8 47 6-52 15-61 (478)
91 2cul_A Glucose-inhibited divis 99.3 7.5E-11 2.6E-15 101.7 13.6 61 151-215 66-127 (232)
92 4hb9_A Similarities with proba 99.3 5.2E-11 1.8E-15 112.0 13.6 56 153-214 112-167 (412)
93 1jnr_A Adenylylsulfate reducta 99.2 1.1E-10 3.9E-15 115.6 16.3 178 6-215 21-220 (643)
94 3cp8_A TRNA uridine 5-carboxym 99.2 1E-10 3.6E-15 113.5 15.2 62 149-214 113-175 (641)
95 2bry_A NEDD9 interacting prote 99.2 1E-10 3.6E-15 112.4 14.8 135 6-214 91-231 (497)
96 2gv8_A Monooxygenase; FMO, FAD 99.2 7.4E-11 2.5E-15 112.2 13.7 65 150-218 112-182 (447)
97 4fk1_A Putative thioredoxin re 99.2 8.6E-11 2.9E-15 105.8 12.5 36 6-41 5-40 (304)
98 1d5t_A Guanine nucleotide diss 99.2 5.5E-10 1.9E-14 105.6 18.6 58 153-214 234-291 (433)
99 4a5l_A Thioredoxin reductase; 99.2 1.7E-10 5.9E-15 104.3 13.5 118 6-212 3-120 (314)
100 4dna_A Probable glutathione re 99.2 1.2E-10 4.1E-15 111.3 12.9 59 152-214 210-269 (463)
101 2q0l_A TRXR, thioredoxin reduc 99.2 1E-10 3.5E-15 105.7 11.7 58 151-213 57-114 (311)
102 2yg5_A Putrescine oxidase; oxi 99.2 5.1E-10 1.8E-14 106.7 17.2 45 6-50 4-48 (453)
103 3itj_A Thioredoxin reductase 1 99.2 1.1E-10 3.8E-15 106.7 11.6 58 151-213 82-142 (338)
104 2b9w_A Putative aminooxidase; 99.2 2.3E-10 7.8E-15 108.2 13.8 46 5-50 4-50 (424)
105 3lxd_A FAD-dependent pyridine 99.2 1.4E-09 4.7E-14 102.4 18.6 71 151-225 192-263 (415)
106 2xve_A Flavin-containing monoo 99.2 1.6E-10 5.3E-15 110.3 12.0 71 150-222 98-175 (464)
107 1vdc_A NTR, NADPH dependent th 99.2 1.3E-10 4.3E-15 106.2 10.9 57 151-213 68-124 (333)
108 3jsk_A Cypbp37 protein; octame 99.2 3.6E-10 1.2E-14 101.6 13.2 38 7-44 79-118 (344)
109 3cty_A Thioredoxin reductase; 99.1 3.3E-10 1.1E-14 102.7 12.9 55 153-213 72-126 (319)
110 2q7v_A Thioredoxin reductase; 99.1 2.2E-10 7.5E-15 104.2 11.2 117 5-213 6-123 (325)
111 4gut_A Lysine-specific histone 99.1 3.7E-10 1.3E-14 113.4 13.7 42 7-48 336-377 (776)
112 3fbs_A Oxidoreductase; structu 99.1 3.6E-10 1.2E-14 101.2 12.3 58 151-213 54-112 (297)
113 4dsg_A UDP-galactopyranose mut 99.1 3.4E-10 1.2E-14 108.5 12.5 45 4-48 6-51 (484)
114 2jae_A L-amino acid oxidase; o 99.1 8.8E-10 3E-14 106.1 15.5 45 5-49 9-53 (489)
115 1rsg_A FMS1 protein; FAD bindi 99.1 3.2E-10 1.1E-14 109.9 12.3 44 6-49 7-51 (516)
116 1zk7_A HGII, reductase, mercur 99.1 7.7E-10 2.6E-14 105.8 14.8 58 152-214 215-272 (467)
117 1xdi_A RV3303C-LPDA; reductase 99.1 2.6E-10 9.1E-15 109.9 10.4 59 152-214 222-280 (499)
118 2gjc_A Thiazole biosynthetic e 99.1 3.3E-09 1.1E-13 94.9 16.5 39 6-44 64-104 (326)
119 2v3a_A Rubredoxin reductase; a 99.1 1.3E-09 4.3E-14 101.6 14.5 69 152-225 186-255 (384)
120 3iwa_A FAD-dependent pyridine 99.1 1.1E-09 3.8E-14 104.9 14.3 68 152-224 201-269 (472)
121 1fl2_A Alkyl hydroperoxide red 99.1 5.9E-10 2E-14 100.6 11.6 59 153-213 56-115 (310)
122 4gcm_A TRXR, thioredoxin reduc 99.1 8.2E-10 2.8E-14 99.8 12.4 38 5-42 4-41 (312)
123 2hqm_A GR, grase, glutathione 99.1 1.1E-09 3.7E-14 105.1 13.2 60 153-214 226-286 (479)
124 2r9z_A Glutathione amide reduc 99.1 4.5E-09 1.6E-13 100.2 17.4 58 153-214 207-265 (463)
125 3urh_A Dihydrolipoyl dehydroge 99.1 9.2E-10 3.1E-14 106.0 12.2 58 152-213 238-300 (491)
126 3lad_A Dihydrolipoamide dehydr 99.1 3.3E-09 1.1E-13 101.7 16.0 58 152-213 220-280 (476)
127 1ges_A Glutathione reductase; 99.1 2.3E-09 7.9E-14 101.9 14.7 59 153-214 208-266 (450)
128 3fg2_P Putative rubredoxin red 99.1 8.4E-09 2.9E-13 96.7 18.3 70 152-225 183-253 (404)
129 2yqu_A 2-oxoglutarate dehydrog 99.0 2.2E-09 7.4E-14 102.4 14.1 58 153-214 208-265 (455)
130 1trb_A Thioredoxin reductase; 99.0 1.3E-09 4.3E-14 98.9 11.6 56 152-213 61-116 (320)
131 2qae_A Lipoamide, dihydrolipoy 99.0 2E-09 6.9E-14 102.9 13.5 58 153-214 215-277 (468)
132 2a87_A TRXR, TR, thioredoxin r 99.0 1.2E-09 4.1E-14 99.8 11.2 56 152-213 70-126 (335)
133 3s5w_A L-ornithine 5-monooxyge 99.0 2.5E-10 8.6E-15 109.2 6.9 57 153-211 127-190 (463)
134 1ojt_A Surface protein; redox- 99.0 9.3E-10 3.2E-14 105.6 10.8 40 4-43 3-42 (482)
135 3l8k_A Dihydrolipoyl dehydroge 99.0 1.4E-09 4.8E-14 103.9 11.1 39 6-44 3-41 (466)
136 3c4a_A Probable tryptophan hyd 99.0 1E-10 3.4E-15 108.9 2.8 51 149-214 94-144 (381)
137 1v59_A Dihydrolipoamide dehydr 99.0 1E-09 3.5E-14 105.3 9.8 39 5-43 3-41 (478)
138 1fec_A Trypanothione reductase 99.0 1.4E-09 4.7E-14 104.6 10.4 59 153-214 231-289 (490)
139 1hyu_A AHPF, alkyl hydroperoxi 99.0 3.1E-09 1E-13 102.9 12.3 60 152-213 266-326 (521)
140 4b1b_A TRXR, thioredoxin reduc 99.0 7.2E-09 2.5E-13 100.0 14.5 57 153-213 263-319 (542)
141 3qvp_A Glucose oxidase; oxidor 99.0 9E-09 3.1E-13 100.0 15.1 35 6-40 18-53 (583)
142 3k30_A Histamine dehydrogenase 99.0 6.8E-09 2.3E-13 104.0 14.7 41 5-45 389-429 (690)
143 3dk9_A Grase, GR, glutathione 99.0 6E-09 2E-13 99.9 13.7 59 153-213 228-293 (478)
144 2eq6_A Pyruvate dehydrogenase 99.0 1.2E-08 4.1E-13 97.3 15.6 59 152-214 209-272 (464)
145 1dxl_A Dihydrolipoamide dehydr 98.9 7.9E-09 2.7E-13 98.9 14.0 40 5-44 4-43 (470)
146 2jbv_A Choline oxidase; alcoho 98.9 6.8E-09 2.3E-13 100.8 13.5 37 6-42 12-49 (546)
147 1zmd_A Dihydrolipoyl dehydroge 98.9 7.9E-09 2.7E-13 99.0 13.7 60 152-214 219-283 (474)
148 3qfa_A Thioredoxin reductase 1 98.9 1.4E-08 4.6E-13 98.3 15.1 36 5-40 30-65 (519)
149 3r9u_A Thioredoxin reductase; 98.9 3.1E-09 1E-13 96.0 9.8 56 151-212 60-117 (315)
150 2iid_A L-amino-acid oxidase; f 98.9 2E-08 6.7E-13 96.9 16.0 46 4-49 30-75 (498)
151 2wpf_A Trypanothione reductase 98.9 5.1E-09 1.7E-13 100.7 11.6 59 153-214 235-293 (495)
152 3ef6_A Toluene 1,2-dioxygenase 98.9 1.6E-08 5.3E-13 95.0 14.6 69 152-225 184-253 (410)
153 3dgz_A Thioredoxin reductase 2 98.9 1.1E-08 3.8E-13 98.3 13.3 35 5-39 4-38 (488)
154 1b37_A Protein (polyamine oxid 98.9 8.2E-09 2.8E-13 98.8 12.0 44 6-49 3-47 (472)
155 3ic9_A Dihydrolipoamide dehydr 98.9 1.6E-08 5.4E-13 97.2 13.8 56 153-213 215-274 (492)
156 1y56_A Hypothetical protein PH 98.9 1.2E-09 4.1E-14 105.0 5.8 67 161-233 265-332 (493)
157 2a8x_A Dihydrolipoyl dehydroge 98.9 1.4E-08 4.8E-13 97.0 12.9 33 7-39 3-35 (464)
158 3kkj_A Amine oxidase, flavin-c 98.9 1.5E-09 5E-14 96.5 5.6 41 8-48 3-43 (336)
159 3ics_A Coenzyme A-disulfide re 98.9 1.3E-08 4.6E-13 100.1 12.9 64 153-223 228-292 (588)
160 1ebd_A E3BD, dihydrolipoamide 98.9 1.4E-08 4.7E-13 96.7 12.4 33 7-39 3-35 (455)
161 1onf_A GR, grase, glutathione 98.9 2.4E-08 8.2E-13 96.2 14.0 59 153-214 217-276 (500)
162 3dgh_A TRXR-1, thioredoxin red 98.8 4.8E-08 1.6E-12 93.7 15.4 35 5-39 7-41 (483)
163 2bc0_A NADH oxidase; flavoprot 98.8 8.4E-09 2.9E-13 99.2 9.3 36 7-42 35-73 (490)
164 3ntd_A FAD-dependent pyridine 98.8 8E-08 2.7E-12 94.1 16.0 68 153-223 192-277 (565)
165 3klj_A NAD(FAD)-dependent dehy 98.8 1.2E-08 3.9E-13 94.8 9.4 37 6-42 8-44 (385)
166 3q9t_A Choline dehydrogenase a 98.8 4.5E-09 1.5E-13 102.2 6.7 37 5-41 4-41 (577)
167 3kd9_A Coenzyme A disulfide re 98.8 1.6E-08 5.4E-13 96.2 10.3 36 7-42 3-40 (449)
168 3h8l_A NADH oxidase; membrane 98.8 3E-08 1E-12 93.1 11.9 59 153-219 218-276 (409)
169 3oc4_A Oxidoreductase, pyridin 98.8 1.1E-08 3.9E-13 97.2 9.0 35 8-42 3-39 (452)
170 2gqw_A Ferredoxin reductase; f 98.8 6E-08 2E-12 90.9 13.5 65 152-225 186-251 (408)
171 3sx6_A Sulfide-quinone reducta 98.8 1.7E-08 5.7E-13 95.6 8.9 34 7-40 4-40 (437)
172 1q1r_A Putidaredoxin reductase 98.7 3.2E-08 1.1E-12 93.4 9.9 35 7-41 4-40 (431)
173 1nhp_A NADH peroxidase; oxidor 98.7 3.4E-08 1.2E-12 93.8 9.7 35 8-42 1-37 (447)
174 2cdu_A NADPH oxidase; flavoenz 98.7 4.4E-08 1.5E-12 93.2 9.8 35 8-42 1-37 (452)
175 1v0j_A UDP-galactopyranose mut 98.7 1.1E-08 3.8E-13 95.5 5.6 50 1-50 1-51 (399)
176 3cgb_A Pyridine nucleotide-dis 98.7 5.3E-08 1.8E-12 93.3 10.3 36 7-42 36-73 (480)
177 3hyw_A Sulfide-quinone reducta 98.7 4.6E-07 1.6E-11 85.5 16.4 62 153-220 200-263 (430)
178 3fim_B ARYL-alcohol oxidase; A 98.7 3.4E-08 1.1E-12 95.9 8.6 36 7-42 2-38 (566)
179 1lvl_A Dihydrolipoamide dehydr 98.7 1.8E-07 6E-12 89.1 13.1 35 6-40 4-38 (458)
180 1kdg_A CDH, cellobiose dehydro 98.7 2.6E-07 8.9E-12 90.0 14.5 37 5-41 5-41 (546)
181 3t37_A Probable dehydrogenase; 98.7 9.6E-08 3.3E-12 92.7 11.4 36 6-41 16-52 (526)
182 1ju2_A HydroxynitrIle lyase; f 98.7 1E-07 3.4E-12 92.4 10.9 35 6-41 25-59 (536)
183 1xhc_A NADH oxidase /nitrite r 98.6 1.1E-08 3.7E-13 94.5 3.8 35 7-42 8-42 (367)
184 1ps9_A 2,4-dienoyl-COA reducta 98.6 2.3E-06 8E-11 85.3 18.8 40 6-45 372-411 (671)
185 3h28_A Sulfide-quinone reducta 98.6 1.7E-08 5.9E-13 95.3 2.8 35 8-42 3-39 (430)
186 2x8g_A Thioredoxin glutathione 98.6 4.9E-07 1.7E-11 89.1 12.9 34 6-39 106-139 (598)
187 1n4w_A CHOD, cholesterol oxida 98.6 4E-07 1.4E-11 87.6 12.0 36 6-41 4-39 (504)
188 1o94_A Tmadh, trimethylamine d 98.5 2.7E-06 9.3E-11 85.5 17.6 40 6-45 388-427 (729)
189 3hdq_A UDP-galactopyranose mut 98.5 8.4E-08 2.9E-12 88.7 5.8 45 5-49 27-71 (397)
190 3vrd_B FCCB subunit, flavocyto 98.5 3.7E-07 1.3E-11 85.3 10.2 59 158-220 207-265 (401)
191 1q1r_A Putidaredoxin reductase 98.5 1.6E-06 5.5E-11 81.8 14.5 68 155-225 193-262 (431)
192 2e1m_A L-glutamate oxidase; L- 98.5 1E-07 3.6E-12 87.3 6.1 46 5-50 42-88 (376)
193 3fpz_A Thiazole biosynthetic e 98.5 1.1E-07 3.6E-12 86.4 5.9 41 6-46 64-106 (326)
194 1gpe_A Protein (glucose oxidas 98.5 1.3E-06 4.6E-11 85.4 14.0 37 6-42 23-60 (587)
195 2gag_A Heterotetrameric sarcos 98.5 6.1E-07 2.1E-11 92.9 10.9 37 7-43 128-164 (965)
196 1v59_A Dihydrolipoamide dehydr 98.4 1.5E-06 5E-11 83.3 12.5 57 156-214 227-288 (478)
197 1ebd_A E3BD, dihydrolipoamide 98.4 2E-06 6.9E-11 81.7 12.6 55 156-214 214-271 (455)
198 1nhp_A NADH peroxidase; oxidor 98.4 1.8E-06 6.3E-11 81.8 12.1 55 155-214 193-247 (447)
199 1sez_A Protoporphyrinogen oxid 98.4 2.3E-07 7.7E-12 89.6 5.5 45 6-50 12-56 (504)
200 1i8t_A UDP-galactopyranose mut 98.4 1.9E-07 6.3E-12 86.1 4.6 43 8-50 2-44 (367)
201 4b63_A L-ornithine N5 monooxyg 98.4 4.5E-07 1.5E-11 87.2 7.2 57 153-211 145-212 (501)
202 1ojt_A Surface protein; redox- 98.4 1.9E-06 6.6E-11 82.5 11.2 55 156-214 229-287 (482)
203 3cgb_A Pyridine nucleotide-dis 98.4 2.7E-06 9.2E-11 81.4 12.1 60 156-220 230-290 (480)
204 1m6i_A Programmed cell death p 98.3 5E-06 1.7E-10 79.8 13.4 61 156-220 229-290 (493)
205 2a8x_A Dihydrolipoyl dehydroge 98.3 5.2E-06 1.8E-10 79.1 13.4 54 157-214 216-272 (464)
206 3oc4_A Oxidoreductase, pyridin 98.3 7E-06 2.4E-10 77.9 13.3 54 155-213 191-244 (452)
207 2cdu_A NADPH oxidase; flavoenz 98.3 9.1E-06 3.1E-10 77.1 13.8 55 155-214 193-248 (452)
208 4g6h_A Rotenone-insensitive NA 98.3 4.1E-07 1.4E-11 87.3 4.4 35 6-40 41-75 (502)
209 1xhc_A NADH oxidase /nitrite r 98.3 3.5E-06 1.2E-10 77.6 10.5 58 157-224 187-245 (367)
210 2bi7_A UDP-galactopyranose mut 98.3 5.4E-07 1.8E-11 83.5 4.9 43 7-49 3-45 (384)
211 1lvl_A Dihydrolipoamide dehydr 98.3 5.2E-06 1.8E-10 78.9 11.8 36 7-42 171-206 (458)
212 2bc0_A NADH oxidase; flavoprot 98.3 7.3E-06 2.5E-10 78.6 12.8 55 155-214 238-292 (490)
213 4eqs_A Coenzyme A disulfide re 98.3 1.4E-06 4.9E-11 82.2 7.4 34 9-42 2-37 (437)
214 1dxl_A Dihydrolipoamide dehydr 98.2 5.2E-06 1.8E-10 79.2 11.2 55 156-214 221-280 (470)
215 3ihm_A Styrene monooxygenase A 98.2 6.5E-07 2.2E-11 84.4 4.2 35 6-40 21-55 (430)
216 4g6h_A Rotenone-insensitive NA 98.2 1.1E-05 3.9E-10 77.3 11.7 63 154-220 273-339 (502)
217 3pl8_A Pyranose 2-oxidase; sub 98.2 1.4E-06 4.8E-11 85.8 5.4 39 6-44 45-83 (623)
218 4eqs_A Coenzyme A disulfide re 98.1 1.1E-05 3.6E-10 76.2 10.8 48 158-213 193-240 (437)
219 3s5w_A L-ornithine 5-monooxyge 98.1 4.6E-05 1.6E-09 72.5 14.2 36 7-42 227-264 (463)
220 3g5s_A Methylenetetrahydrofola 98.1 4.8E-06 1.7E-10 75.4 6.8 36 8-43 2-37 (443)
221 2vdc_G Glutamate synthase [NAD 98.1 3.2E-06 1.1E-10 80.1 5.7 39 6-44 121-159 (456)
222 1trb_A Thioredoxin reductase; 98.0 4.7E-05 1.6E-09 68.4 12.7 33 8-40 146-178 (320)
223 3dgh_A TRXR-1, thioredoxin red 98.0 4.2E-05 1.4E-09 73.2 12.7 55 156-213 230-289 (483)
224 2zbw_A Thioredoxin reductase; 98.0 5.2E-05 1.8E-09 68.7 12.3 34 8-41 153-186 (335)
225 2xag_A Lysine-specific histone 98.0 5.7E-06 1.9E-10 83.8 6.1 43 6-48 277-319 (852)
226 3d1c_A Flavin-containing putat 98.0 4.8E-05 1.6E-09 69.9 12.0 57 155-215 216-274 (369)
227 2z3y_A Lysine-specific histone 98.0 5.5E-06 1.9E-10 82.4 5.8 43 6-48 106-148 (662)
228 3kd9_A Coenzyme A disulfide re 98.0 3.8E-05 1.3E-09 72.8 11.3 34 8-41 149-182 (449)
229 3dgz_A Thioredoxin reductase 2 98.0 7.7E-05 2.6E-09 71.5 13.3 33 7-39 185-217 (488)
230 3ab1_A Ferredoxin--NADP reduct 97.9 5.1E-05 1.7E-09 69.6 11.0 34 8-41 164-197 (360)
231 3qfa_A Thioredoxin reductase 1 97.8 0.00019 6.4E-09 69.3 13.5 32 8-39 211-242 (519)
232 3f8d_A Thioredoxin reductase ( 97.8 7E-05 2.4E-09 67.3 9.9 34 8-41 155-188 (323)
233 3cty_A Thioredoxin reductase; 97.8 8.2E-05 2.8E-09 66.9 9.5 33 8-40 156-188 (319)
234 3itj_A Thioredoxin reductase 1 97.8 0.00012 4.2E-09 66.2 10.7 34 8-41 174-207 (338)
235 3l8k_A Dihydrolipoyl dehydroge 97.8 0.00018 6.2E-09 68.4 11.9 35 7-41 172-206 (466)
236 2x8g_A Thioredoxin glutathione 97.8 0.00036 1.2E-08 68.6 14.4 32 8-39 287-318 (598)
237 3uox_A Otemo; baeyer-villiger 97.8 0.00019 6.3E-09 69.6 11.9 35 7-41 185-219 (545)
238 1vg0_A RAB proteins geranylger 97.7 3.1E-05 1.1E-09 75.4 6.3 56 153-210 378-434 (650)
239 3ayj_A Pro-enzyme of L-phenyla 97.7 1.3E-05 4.5E-10 79.1 3.3 36 7-42 56-100 (721)
240 1lqt_A FPRA; NADP+ derivative, 97.7 2.6E-05 8.9E-10 73.9 4.7 38 7-44 3-47 (456)
241 2q0l_A TRXR, thioredoxin reduc 97.7 0.0004 1.4E-08 62.0 12.3 34 8-41 144-177 (311)
242 2q7v_A Thioredoxin reductase; 97.7 0.00016 5.4E-09 65.2 9.7 34 8-41 153-186 (325)
243 3r9u_A Thioredoxin reductase; 97.7 0.00017 5.7E-09 64.6 9.7 34 8-41 148-181 (315)
244 1gte_A Dihydropyrimidine dehyd 97.7 3.9E-05 1.3E-09 80.0 5.8 39 7-45 187-226 (1025)
245 3gwf_A Cyclohexanone monooxyge 97.6 0.00056 1.9E-08 66.1 13.3 35 7-41 178-212 (540)
246 1m6i_A Programmed cell death p 97.6 4E-05 1.4E-09 73.4 5.3 38 5-42 9-48 (493)
247 1cjc_A Protein (adrenodoxin re 97.6 4.4E-05 1.5E-09 72.4 5.2 39 6-44 5-45 (460)
248 1coy_A Cholesterol oxidase; ox 97.6 5.1E-05 1.7E-09 72.9 5.4 37 5-41 9-45 (507)
249 4ap3_A Steroid monooxygenase; 97.6 0.00019 6.4E-09 69.6 9.0 35 7-41 191-225 (549)
250 1fl2_A Alkyl hydroperoxide red 97.6 0.00026 9E-09 63.2 9.4 34 8-41 145-178 (310)
251 1vdc_A NTR, NADPH dependent th 97.5 0.00032 1.1E-08 63.3 9.6 34 8-41 160-193 (333)
252 3lzw_A Ferredoxin--NADP reduct 97.5 0.00029 9.9E-09 63.5 8.4 34 8-41 155-188 (332)
253 3fbs_A Oxidoreductase; structu 97.5 0.00027 9.3E-09 62.6 8.0 52 161-220 182-234 (297)
254 2a87_A TRXR, TR, thioredoxin r 97.5 0.00031 1.1E-08 63.6 8.3 33 8-40 156-188 (335)
255 1cjc_A Protein (adrenodoxin re 97.4 0.0014 4.9E-08 61.9 12.0 35 7-41 145-200 (460)
256 1lqt_A FPRA; NADP+ derivative, 97.1 0.0013 4.6E-08 62.1 9.0 58 156-215 249-328 (456)
257 1hyu_A AHPF, alkyl hydroperoxi 97.1 0.0015 5E-08 63.0 9.2 34 8-41 356-389 (521)
258 2gag_A Heterotetrameric sarcos 96.9 0.0023 7.7E-08 66.4 9.3 33 8-40 285-317 (965)
259 1w4x_A Phenylacetone monooxyge 96.9 0.017 5.9E-07 55.8 14.6 33 8-40 187-219 (542)
260 2g1u_A Hypothetical protein TM 96.7 0.0016 5.6E-08 51.5 5.0 35 6-40 18-52 (155)
261 3llv_A Exopolyphosphatase-rela 96.7 0.0021 7.2E-08 49.9 5.1 33 8-40 7-39 (141)
262 1gte_A Dihydropyrimidine dehyd 96.6 0.012 4E-07 61.5 11.3 33 8-40 333-366 (1025)
263 3h28_A Sulfide-quinone reducta 96.5 0.008 2.7E-07 56.3 8.8 58 156-219 203-262 (430)
264 4a9w_A Monooxygenase; baeyer-v 96.5 0.0043 1.5E-07 56.3 6.8 32 8-40 164-195 (357)
265 3fwz_A Inner membrane protein 96.5 0.0044 1.5E-07 48.0 5.7 35 6-40 6-40 (140)
266 1lss_A TRK system potassium up 96.4 0.0032 1.1E-07 48.5 4.7 33 8-40 5-37 (140)
267 3sx6_A Sulfide-quinone reducta 96.4 0.014 4.9E-07 54.7 9.8 51 157-213 212-269 (437)
268 3ic5_A Putative saccharopine d 96.2 0.0046 1.6E-07 46.0 4.6 34 7-40 5-39 (118)
269 1id1_A Putative potassium chan 96.2 0.0068 2.3E-07 47.7 5.4 33 7-39 3-35 (153)
270 3klj_A NAD(FAD)-dependent dehy 96.1 0.005 1.7E-07 56.8 5.1 35 8-42 147-181 (385)
271 4gcm_A TRXR, thioredoxin reduc 96.1 0.0042 1.4E-07 55.4 4.3 35 8-42 146-180 (312)
272 4fk1_A Putative thioredoxin re 96.0 0.025 8.4E-07 50.1 9.0 53 164-220 191-244 (304)
273 3ado_A Lambda-crystallin; L-gu 96.0 0.0064 2.2E-07 54.0 4.9 33 7-39 6-38 (319)
274 4b63_A L-ornithine N5 monooxyg 95.9 0.039 1.3E-06 52.7 10.4 33 8-40 247-281 (501)
275 1pzg_A LDH, lactate dehydrogen 95.8 0.01 3.5E-07 53.3 5.5 36 5-40 7-43 (331)
276 2eq6_A Pyruvate dehydrogenase 95.8 0.0083 2.9E-07 56.8 5.1 35 8-42 170-204 (464)
277 2hmt_A YUAA protein; RCK, KTN, 95.8 0.0097 3.3E-07 46.0 4.5 33 8-40 7-39 (144)
278 1y6j_A L-lactate dehydrogenase 95.8 0.0097 3.3E-07 53.1 5.0 40 1-40 1-42 (318)
279 2yqu_A 2-oxoglutarate dehydrog 95.7 0.01 3.4E-07 56.1 5.1 35 8-42 168-202 (455)
280 4a5l_A Thioredoxin reductase; 95.6 0.009 3.1E-07 53.1 4.3 34 8-41 153-186 (314)
281 2v3a_A Rubredoxin reductase; a 95.5 0.012 4.3E-07 54.1 5.1 36 7-42 145-180 (384)
282 3l4b_C TRKA K+ channel protien 95.5 0.011 3.9E-07 49.5 4.4 32 9-40 2-33 (218)
283 3g0o_A 3-hydroxyisobutyrate de 95.5 0.013 4.3E-07 52.1 4.9 40 1-40 1-40 (303)
284 3c85_A Putative glutathione-re 95.5 0.013 4.6E-07 47.5 4.6 33 8-40 40-73 (183)
285 1f0y_A HCDH, L-3-hydroxyacyl-C 95.5 0.015 5.1E-07 51.6 5.3 32 8-39 16-47 (302)
286 4e12_A Diketoreductase; oxidor 95.4 0.016 5.6E-07 50.8 5.3 33 8-40 5-37 (283)
287 1ges_A Glutathione reductase; 95.4 0.014 4.8E-07 55.0 5.1 36 7-42 167-202 (450)
288 2gqw_A Ferredoxin reductase; f 95.4 0.015 5.1E-07 54.0 5.1 36 7-42 145-180 (408)
289 2dpo_A L-gulonate 3-dehydrogen 95.3 0.016 5.6E-07 51.6 4.9 34 7-40 6-39 (319)
290 3l6d_A Putative oxidoreductase 95.3 0.024 8.3E-07 50.3 6.0 35 6-40 8-42 (306)
291 2ewd_A Lactate dehydrogenase,; 95.3 0.017 6E-07 51.5 5.1 34 7-40 4-38 (317)
292 3i83_A 2-dehydropantoate 2-red 95.3 0.016 5.6E-07 51.8 4.9 33 8-40 3-35 (320)
293 4b1b_A TRXR, thioredoxin reduc 95.2 0.023 7.9E-07 54.7 5.9 36 6-41 222-257 (542)
294 2r9z_A Glutathione amide reduc 95.2 0.018 6.2E-07 54.4 5.1 35 8-42 167-201 (463)
295 3hn2_A 2-dehydropantoate 2-red 95.1 0.017 5.8E-07 51.5 4.5 33 8-40 3-35 (312)
296 2hqm_A GR, grase, glutathione 95.1 0.043 1.5E-06 52.1 7.5 35 8-42 186-220 (479)
297 3ef6_A Toluene 1,2-dioxygenase 95.1 0.068 2.3E-06 49.6 8.6 36 7-42 143-178 (410)
298 3ghy_A Ketopantoate reductase 95.1 0.023 7.8E-07 51.2 5.2 32 8-39 4-35 (335)
299 3k96_A Glycerol-3-phosphate de 95.1 0.023 7.8E-07 51.6 5.1 33 7-39 29-61 (356)
300 2y0c_A BCEC, UDP-glucose dehyd 95.0 0.02 6.8E-07 54.2 4.9 34 7-40 8-41 (478)
301 4g65_A TRK system potassium up 95.0 0.0093 3.2E-07 56.2 2.6 34 7-40 3-36 (461)
302 1zmd_A Dihydrolipoyl dehydroge 95.0 0.023 7.9E-07 53.9 5.1 35 8-42 179-213 (474)
303 1vg0_A RAB proteins geranylger 94.9 0.075 2.6E-06 51.9 8.5 45 3-47 4-48 (650)
304 3ic9_A Dihydrolipoamide dehydr 94.9 0.025 8.5E-07 54.0 5.1 36 7-42 174-209 (492)
305 1lld_A L-lactate dehydrogenase 94.9 0.025 8.5E-07 50.5 4.9 33 7-39 7-41 (319)
306 3ktd_A Prephenate dehydrogenas 94.9 0.032 1.1E-06 50.2 5.4 40 1-40 2-41 (341)
307 1zej_A HBD-9, 3-hydroxyacyl-CO 94.8 0.026 8.8E-07 49.5 4.7 34 6-40 11-44 (293)
308 2ew2_A 2-dehydropantoate 2-red 94.8 0.026 8.8E-07 50.2 4.8 32 8-39 4-35 (316)
309 2raf_A Putative dinucleotide-b 94.8 0.031 1E-06 46.5 4.9 35 7-41 19-53 (209)
310 3g17_A Similar to 2-dehydropan 94.8 0.021 7.3E-07 50.3 4.2 33 8-40 3-35 (294)
311 1t2d_A LDH-P, L-lactate dehydr 94.8 0.032 1.1E-06 49.8 5.3 34 7-40 4-38 (322)
312 3dfz_A SIRC, precorrin-2 dehyd 94.8 0.03 1E-06 46.8 4.7 33 7-39 31-63 (223)
313 1ks9_A KPA reductase;, 2-dehyd 94.8 0.029 9.8E-07 49.3 4.9 32 9-40 2-33 (291)
314 3pid_A UDP-glucose 6-dehydroge 94.7 0.026 8.8E-07 52.4 4.5 33 7-40 36-68 (432)
315 3lk7_A UDP-N-acetylmuramoylala 94.7 0.029 9.9E-07 52.8 5.0 34 7-40 9-42 (451)
316 3qha_A Putative oxidoreductase 94.7 0.021 7.2E-07 50.4 3.8 35 7-41 15-49 (296)
317 1onf_A GR, grase, glutathione 94.7 0.028 9.5E-07 53.8 4.8 36 7-42 176-211 (500)
318 3tl2_A Malate dehydrogenase; c 94.6 0.04 1.4E-06 48.9 5.4 33 7-39 8-41 (315)
319 1kyq_A Met8P, siroheme biosynt 94.6 0.019 6.6E-07 49.6 3.1 34 7-40 13-46 (274)
320 1bg6_A N-(1-D-carboxylethyl)-L 94.6 0.032 1.1E-06 50.7 4.9 32 8-39 5-36 (359)
321 3gg2_A Sugar dehydrogenase, UD 94.6 0.033 1.1E-06 52.2 4.9 33 8-40 3-35 (450)
322 4a7p_A UDP-glucose dehydrogena 94.5 0.035 1.2E-06 51.9 5.0 36 6-41 7-42 (446)
323 3vtf_A UDP-glucose 6-dehydroge 94.5 0.034 1.2E-06 51.6 4.8 35 6-40 20-54 (444)
324 2wpf_A Trypanothione reductase 94.5 0.08 2.7E-06 50.5 7.6 35 8-42 192-229 (495)
325 3k6j_A Protein F01G10.3, confi 94.4 0.045 1.5E-06 51.2 5.4 33 8-40 55-87 (460)
326 3doj_A AT3G25530, dehydrogenas 94.4 0.045 1.5E-06 48.6 5.2 34 7-40 21-54 (310)
327 1zk7_A HGII, reductase, mercur 94.4 0.039 1.3E-06 52.2 5.1 35 8-42 177-211 (467)
328 2qyt_A 2-dehydropantoate 2-red 94.4 0.029 9.8E-07 50.0 3.9 32 7-38 8-45 (317)
329 2qae_A Lipoamide, dihydrolipoy 94.3 0.04 1.4E-06 52.1 5.1 36 7-42 174-209 (468)
330 3pqe_A L-LDH, L-lactate dehydr 94.3 0.043 1.5E-06 48.9 5.0 34 6-39 4-39 (326)
331 3g79_A NDP-N-acetyl-D-galactos 94.3 0.03 1E-06 52.7 4.1 35 7-41 18-54 (478)
332 2hjr_A Malate dehydrogenase; m 94.3 0.046 1.6E-06 48.9 5.1 33 8-40 15-48 (328)
333 2x5o_A UDP-N-acetylmuramoylala 94.3 0.028 9.6E-07 52.7 3.8 35 8-42 6-40 (439)
334 1jw9_B Molybdopterin biosynthe 94.2 0.04 1.4E-06 47.2 4.3 35 7-41 31-66 (249)
335 2xve_A Flavin-containing monoo 94.2 0.039 1.3E-06 52.2 4.6 34 8-41 198-231 (464)
336 3ego_A Probable 2-dehydropanto 94.2 0.045 1.6E-06 48.5 4.7 31 8-39 3-33 (307)
337 2v6b_A L-LDH, L-lactate dehydr 94.2 0.047 1.6E-06 48.3 4.8 32 9-40 2-35 (304)
338 3urh_A Dihydrolipoyl dehydroge 94.1 0.044 1.5E-06 52.2 4.8 36 7-42 198-233 (491)
339 3hwr_A 2-dehydropantoate 2-red 94.1 0.047 1.6E-06 48.7 4.7 32 7-39 19-50 (318)
340 3l9w_A Glutathione-regulated p 94.1 0.053 1.8E-06 50.2 5.1 34 7-40 4-37 (413)
341 3dk9_A Grase, GR, glutathione 94.0 0.054 1.8E-06 51.4 5.1 35 8-42 188-222 (478)
342 3lxd_A FAD-dependent pyridine 93.9 0.055 1.9E-06 50.3 5.1 36 7-42 152-187 (415)
343 2vns_A Metalloreductase steap3 93.9 0.065 2.2E-06 44.7 5.1 33 7-39 28-60 (215)
344 3ntd_A FAD-dependent pyridine 93.9 0.052 1.8E-06 52.7 5.1 35 8-42 152-186 (565)
345 3fg2_P Putative rubredoxin red 93.9 0.058 2E-06 49.9 5.1 35 8-42 143-177 (404)
346 1z82_A Glycerol-3-phosphate de 93.9 0.055 1.9E-06 48.6 4.9 33 7-39 14-46 (335)
347 3mog_A Probable 3-hydroxybutyr 93.9 0.061 2.1E-06 50.9 5.3 33 8-40 6-38 (483)
348 1zcj_A Peroxisomal bifunctiona 93.9 0.058 2E-06 50.9 5.1 33 8-40 38-70 (463)
349 3dtt_A NADP oxidoreductase; st 93.9 0.06 2.1E-06 46.0 4.8 34 7-40 19-52 (245)
350 4dio_A NAD(P) transhydrogenase 93.9 0.063 2.2E-06 49.1 5.1 34 7-40 190-223 (405)
351 1mv8_A GMD, GDP-mannose 6-dehy 93.8 0.044 1.5E-06 51.3 4.2 32 9-40 2-33 (436)
352 3pef_A 6-phosphogluconate dehy 93.8 0.061 2.1E-06 47.2 4.8 33 8-40 2-34 (287)
353 2uyy_A N-PAC protein; long-cha 93.8 0.081 2.8E-06 47.1 5.7 34 7-40 30-63 (316)
354 2gv8_A Monooxygenase; FMO, FAD 93.8 0.051 1.7E-06 51.1 4.5 33 8-40 213-246 (447)
355 2q3e_A UDP-glucose 6-dehydroge 93.7 0.048 1.6E-06 51.5 4.3 33 8-40 6-40 (467)
356 3dfu_A Uncharacterized protein 93.6 0.021 7.2E-07 48.0 1.4 33 7-39 6-38 (232)
357 1ldn_A L-lactate dehydrogenase 93.6 0.076 2.6E-06 47.3 5.2 34 6-39 5-40 (316)
358 1txg_A Glycerol-3-phosphate de 93.6 0.057 1.9E-06 48.5 4.4 30 9-38 2-31 (335)
359 1fec_A Trypanothione reductase 93.6 0.06 2E-06 51.3 4.8 36 7-42 187-225 (490)
360 2a9f_A Putative malic enzyme ( 93.6 0.063 2.2E-06 48.6 4.6 34 7-40 188-222 (398)
361 4e21_A 6-phosphogluconate dehy 93.6 0.069 2.4E-06 48.4 4.9 34 7-40 22-55 (358)
362 3d1l_A Putative NADP oxidoredu 93.6 0.072 2.5E-06 46.1 4.8 33 7-39 10-43 (266)
363 3p2y_A Alanine dehydrogenase/p 93.6 0.064 2.2E-06 48.6 4.5 34 7-40 184-217 (381)
364 3eag_A UDP-N-acetylmuramate:L- 93.6 0.064 2.2E-06 48.0 4.6 33 8-40 5-38 (326)
365 1guz_A Malate dehydrogenase; o 93.5 0.074 2.5E-06 47.2 4.9 32 9-40 2-35 (310)
366 3cky_A 2-hydroxymethyl glutara 93.4 0.062 2.1E-06 47.4 4.3 33 7-39 4-36 (301)
367 3gvi_A Malate dehydrogenase; N 93.4 0.088 3E-06 46.9 5.2 34 7-40 7-41 (324)
368 1mo9_A ORF3; nucleotide bindin 93.3 0.078 2.7E-06 51.0 5.1 35 8-42 215-249 (523)
369 3lad_A Dihydrolipoamide dehydr 93.3 0.078 2.7E-06 50.3 5.1 36 7-42 180-215 (476)
370 3pdu_A 3-hydroxyisobutyrate de 93.3 0.064 2.2E-06 47.0 4.2 32 9-40 3-34 (287)
371 1vl6_A Malate oxidoreductase; 93.3 0.076 2.6E-06 48.0 4.6 35 6-40 191-226 (388)
372 3h8v_A Ubiquitin-like modifier 93.3 0.079 2.7E-06 46.3 4.6 35 7-41 36-71 (292)
373 3gpi_A NAD-dependent epimerase 93.3 0.1 3.4E-06 45.6 5.4 34 8-41 4-37 (286)
374 3qsg_A NAD-binding phosphogluc 93.2 0.074 2.5E-06 47.3 4.5 33 7-39 24-57 (312)
375 1xdi_A RV3303C-LPDA; reductase 93.2 0.093 3.2E-06 50.1 5.4 36 7-42 182-217 (499)
376 3vps_A TUNA, NAD-dependent epi 93.2 0.093 3.2E-06 46.5 5.1 35 7-41 7-42 (321)
377 1jay_A Coenzyme F420H2:NADP+ o 93.2 0.082 2.8E-06 43.9 4.4 31 9-39 2-33 (212)
378 1a5z_A L-lactate dehydrogenase 93.2 0.078 2.7E-06 47.3 4.5 31 9-39 2-34 (319)
379 4dll_A 2-hydroxy-3-oxopropiona 93.1 0.075 2.6E-06 47.4 4.4 33 8-40 32-64 (320)
380 1ur5_A Malate dehydrogenase; o 93.1 0.097 3.3E-06 46.4 5.0 33 8-40 3-36 (309)
381 2aef_A Calcium-gated potassium 93.1 0.037 1.3E-06 46.9 2.2 34 6-40 8-41 (234)
382 4huj_A Uncharacterized protein 93.1 0.06 2.1E-06 45.1 3.5 32 8-39 24-56 (220)
383 2h78_A Hibadh, 3-hydroxyisobut 93.1 0.075 2.5E-06 47.0 4.2 33 8-40 4-36 (302)
384 3rui_A Ubiquitin-like modifier 93.0 0.1 3.6E-06 46.5 5.0 35 7-41 34-69 (340)
385 1dlj_A UDP-glucose dehydrogena 93.0 0.064 2.2E-06 49.5 3.8 31 9-40 2-32 (402)
386 3ics_A Coenzyme A-disulfide re 93.0 0.091 3.1E-06 51.3 5.1 35 8-42 188-222 (588)
387 3d0o_A L-LDH 1, L-lactate dehy 93.0 0.096 3.3E-06 46.6 4.8 33 7-39 6-40 (317)
388 3c24_A Putative oxidoreductase 93.0 0.12 4E-06 45.3 5.3 32 8-39 12-44 (286)
389 3oj0_A Glutr, glutamyl-tRNA re 93.0 0.033 1.1E-06 43.1 1.6 32 8-39 22-53 (144)
390 3p7m_A Malate dehydrogenase; p 92.9 0.12 4.3E-06 45.9 5.3 33 8-40 6-39 (321)
391 3phh_A Shikimate dehydrogenase 92.9 0.11 3.9E-06 44.7 4.9 33 8-40 119-151 (269)
392 2vdc_G Glutamate synthase [NAD 92.8 0.11 3.9E-06 48.8 5.3 34 8-41 265-299 (456)
393 4ezb_A Uncharacterized conserv 92.8 0.1 3.6E-06 46.4 4.7 33 8-40 25-58 (317)
394 2zyd_A 6-phosphogluconate dehy 92.7 0.1 3.6E-06 49.3 4.9 33 7-39 15-47 (480)
395 1oju_A MDH, malate dehydrogena 92.7 0.1 3.5E-06 45.8 4.5 32 9-40 2-35 (294)
396 2o3j_A UDP-glucose 6-dehydroge 92.7 0.09 3.1E-06 49.8 4.4 33 8-40 10-44 (481)
397 2p4q_A 6-phosphogluconate dehy 92.7 0.13 4.5E-06 48.8 5.4 34 7-40 10-43 (497)
398 3ggo_A Prephenate dehydrogenas 92.6 0.14 4.9E-06 45.4 5.4 33 8-40 34-68 (314)
399 2izz_A Pyrroline-5-carboxylate 92.6 0.12 4E-06 46.2 4.9 34 7-40 22-59 (322)
400 3dhn_A NAD-dependent epimerase 92.6 0.088 3E-06 44.1 3.9 33 8-40 5-38 (227)
401 2f1k_A Prephenate dehydrogenas 92.6 0.12 4E-06 45.1 4.8 31 9-39 2-32 (279)
402 2rcy_A Pyrroline carboxylate r 92.6 0.12 4.3E-06 44.4 4.9 33 8-40 5-41 (262)
403 1nyt_A Shikimate 5-dehydrogena 92.6 0.12 4.2E-06 44.8 4.8 32 8-39 120-151 (271)
404 1hyh_A L-hicdh, L-2-hydroxyiso 92.6 0.1 3.5E-06 46.2 4.4 31 9-39 3-35 (309)
405 1yqg_A Pyrroline-5-carboxylate 92.5 0.11 3.8E-06 44.7 4.5 31 9-39 2-33 (263)
406 2i6t_A Ubiquitin-conjugating e 92.5 0.11 3.9E-06 45.7 4.5 34 7-40 14-49 (303)
407 3iwa_A FAD-dependent pyridine 92.5 0.11 3.8E-06 49.1 4.8 36 7-42 159-195 (472)
408 4gwg_A 6-phosphogluconate dehy 92.5 0.14 5E-06 48.2 5.5 34 7-40 4-37 (484)
409 3ew7_A LMO0794 protein; Q8Y8U8 92.5 0.14 4.7E-06 42.6 4.9 31 9-39 2-33 (221)
410 1ez4_A Lactate dehydrogenase; 92.4 0.12 4.2E-06 45.9 4.7 35 5-39 3-39 (318)
411 2pv7_A T-protein [includes: ch 92.4 0.13 4.4E-06 45.3 4.8 33 8-40 22-55 (298)
412 3ius_A Uncharacterized conserv 92.4 0.1 3.6E-06 45.5 4.2 33 8-40 6-38 (286)
413 2pgd_A 6-phosphogluconate dehy 92.4 0.14 4.9E-06 48.5 5.3 33 8-40 3-35 (482)
414 1vpd_A Tartronate semialdehyde 92.3 0.11 3.6E-06 45.8 4.2 32 8-39 6-37 (299)
415 3h2s_A Putative NADH-flavin re 92.3 0.14 4.8E-06 42.7 4.7 31 9-39 2-33 (224)
416 2r6j_A Eugenol synthase 1; phe 92.3 0.13 4.6E-06 45.6 4.8 33 8-40 12-45 (318)
417 1evy_A Glycerol-3-phosphate de 92.2 0.069 2.3E-06 48.7 2.9 31 9-39 17-47 (366)
418 1x13_A NAD(P) transhydrogenase 92.2 0.13 4.4E-06 47.4 4.7 33 8-40 173-205 (401)
419 1x0v_A GPD-C, GPDH-C, glycerol 92.2 0.086 2.9E-06 47.8 3.5 34 8-41 9-49 (354)
420 1zud_1 Adenylyltransferase THI 92.2 0.12 4.1E-06 44.2 4.2 35 7-41 28-63 (251)
421 3d3w_A L-xylulose reductase; u 92.2 0.2 6.7E-06 42.5 5.6 39 1-39 1-40 (244)
422 2wtb_A MFP2, fatty acid multif 92.2 0.15 5.1E-06 50.9 5.4 33 8-40 313-345 (725)
423 1pjc_A Protein (L-alanine dehy 92.2 0.13 4.6E-06 46.6 4.7 32 8-39 168-199 (361)
424 3tri_A Pyrroline-5-carboxylate 92.1 0.19 6.3E-06 43.9 5.4 33 8-40 4-39 (280)
425 1yj8_A Glycerol-3-phosphate de 92.1 0.12 3.9E-06 47.4 4.3 34 8-41 22-62 (375)
426 1pgj_A 6PGDH, 6-PGDH, 6-phosph 92.1 0.15 5.2E-06 48.2 5.2 32 8-39 2-33 (478)
427 2gf2_A Hibadh, 3-hydroxyisobut 92.1 0.14 4.8E-06 45.0 4.6 32 9-40 2-33 (296)
428 3nep_X Malate dehydrogenase; h 92.0 0.15 5E-06 45.2 4.6 32 9-40 2-35 (314)
429 3o0h_A Glutathione reductase; 92.0 0.16 5.4E-06 48.3 5.1 36 7-42 191-226 (484)
430 4dna_A Probable glutathione re 92.0 0.16 5.4E-06 47.9 5.1 36 7-42 170-205 (463)
431 1coy_A Cholesterol oxidase; ox 91.9 0.2 6.9E-06 47.8 5.8 59 160-220 233-301 (507)
432 3ldh_A Lactate dehydrogenase; 91.9 0.17 5.8E-06 45.0 4.8 33 7-39 21-55 (330)
433 3vku_A L-LDH, L-lactate dehydr 91.8 0.17 5.8E-06 45.0 4.8 34 6-39 8-43 (326)
434 2iz1_A 6-phosphogluconate dehy 91.8 0.19 6.6E-06 47.5 5.5 33 7-39 5-37 (474)
435 4b4o_A Epimerase family protei 91.8 0.17 5.7E-06 44.5 4.8 32 9-40 2-34 (298)
436 1hdo_A Biliverdin IX beta redu 91.8 0.2 6.7E-06 41.1 5.0 33 8-40 4-37 (206)
437 1l7d_A Nicotinamide nucleotide 91.8 0.17 5.7E-06 46.5 4.9 34 7-40 172-205 (384)
438 3ojo_A CAP5O; rossmann fold, c 91.7 0.13 4.5E-06 47.7 4.1 33 8-40 12-44 (431)
439 1p77_A Shikimate 5-dehydrogena 91.7 0.13 4.4E-06 44.7 3.9 32 8-39 120-151 (272)
440 4ffl_A PYLC; amino acid, biosy 91.7 0.18 6.3E-06 45.7 5.1 33 9-41 3-35 (363)
441 2egg_A AROE, shikimate 5-dehyd 91.6 0.16 5.4E-06 44.7 4.4 32 8-39 142-174 (297)
442 3e8x_A Putative NAD-dependent 91.6 0.18 6.3E-06 42.4 4.7 34 7-40 21-55 (236)
443 2eez_A Alanine dehydrogenase; 91.6 0.17 5.7E-06 46.1 4.7 32 8-39 167-198 (369)
444 4aj2_A L-lactate dehydrogenase 91.5 0.21 7.3E-06 44.5 5.1 34 6-39 18-53 (331)
445 1pjq_A CYSG, siroheme synthase 91.5 0.17 5.7E-06 47.6 4.6 33 7-39 12-44 (457)
446 3u62_A Shikimate dehydrogenase 91.5 0.22 7.5E-06 42.6 5.0 32 9-40 110-142 (253)
447 2g5c_A Prephenate dehydrogenas 91.5 0.19 6.6E-06 43.7 4.8 31 9-39 3-35 (281)
448 3gt0_A Pyrroline-5-carboxylate 91.5 0.25 8.4E-06 42.1 5.3 32 8-39 3-38 (247)
449 3h5n_A MCCB protein; ubiquitin 91.4 0.17 5.8E-06 45.7 4.5 35 7-41 118-153 (353)
450 3c7a_A Octopine dehydrogenase; 91.4 0.099 3.4E-06 48.4 3.0 30 8-37 3-33 (404)
451 1wdk_A Fatty oxidation complex 91.3 0.15 5.2E-06 50.8 4.4 33 8-40 315-347 (715)
452 3don_A Shikimate dehydrogenase 91.3 0.18 6.1E-06 43.8 4.3 34 7-40 117-151 (277)
453 2hk9_A Shikimate dehydrogenase 91.3 0.19 6.4E-06 43.7 4.5 32 8-39 130-161 (275)
454 3fi9_A Malate dehydrogenase; s 91.3 0.24 8.2E-06 44.4 5.2 33 7-39 8-43 (343)
455 4gsl_A Ubiquitin-like modifier 91.2 0.21 7.3E-06 48.0 5.0 35 7-41 326-361 (615)
456 2ahr_A Putative pyrroline carb 91.2 0.17 5.7E-06 43.5 4.0 32 8-39 4-35 (259)
457 2cvz_A Dehydrogenase, 3-hydrox 91.1 0.17 6E-06 44.2 4.1 30 9-39 3-32 (289)
458 1cyd_A Carbonyl reductase; sho 91.1 0.28 9.5E-06 41.5 5.3 33 7-39 7-40 (244)
459 1i36_A Conserved hypothetical 90.9 0.19 6.5E-06 43.3 4.2 30 9-38 2-31 (264)
460 1y7t_A Malate dehydrogenase; N 90.9 0.17 5.6E-06 45.3 3.9 33 7-39 4-44 (327)
461 2vhw_A Alanine dehydrogenase; 90.9 0.22 7.5E-06 45.5 4.7 33 7-39 168-200 (377)
462 3vh1_A Ubiquitin-like modifier 90.8 0.22 7.4E-06 47.9 4.7 35 7-41 327-362 (598)
463 3oig_A Enoyl-[acyl-carrier-pro 90.8 0.29 1E-05 42.1 5.3 40 1-40 1-43 (266)
464 1np3_A Ketol-acid reductoisome 90.8 0.27 9.4E-06 44.1 5.2 32 8-39 17-48 (338)
465 1b8p_A Protein (malate dehydro 90.8 0.17 5.9E-06 45.2 3.8 33 7-39 5-45 (329)
466 1yb4_A Tartronic semialdehyde 90.8 0.14 4.8E-06 44.9 3.2 32 8-40 4-35 (295)
467 3tnl_A Shikimate dehydrogenase 90.7 0.27 9.1E-06 43.5 4.9 33 7-39 154-187 (315)
468 3zwc_A Peroxisomal bifunctiona 90.7 0.19 6.6E-06 50.0 4.4 33 8-40 317-349 (742)
469 3jyo_A Quinate/shikimate dehyd 90.7 0.28 9.5E-06 42.8 5.0 33 7-39 127-160 (283)
470 1edz_A 5,10-methylenetetrahydr 90.7 0.18 6.3E-06 44.4 3.8 33 7-39 177-210 (320)
471 3enk_A UDP-glucose 4-epimerase 90.6 0.3 1E-05 43.6 5.4 35 7-41 5-40 (341)
472 4gx0_A TRKA domain protein; me 90.6 0.25 8.6E-06 47.9 5.1 35 8-42 349-383 (565)
473 1y1p_A ARII, aldehyde reductas 90.5 0.32 1.1E-05 43.4 5.5 33 7-39 11-44 (342)
474 2d5c_A AROE, shikimate 5-dehyd 90.5 0.3 1E-05 42.1 5.0 31 9-39 118-148 (263)
475 1o94_A Tmadh, trimethylamine d 90.5 0.17 5.7E-06 50.8 3.8 33 8-40 529-563 (729)
476 3hyw_A Sulfide-quinone reducta 90.5 0.058 2E-06 50.4 0.4 32 9-40 4-37 (430)
477 3pwz_A Shikimate dehydrogenase 90.5 0.3 1E-05 42.2 5.0 33 7-39 120-153 (272)
478 4gbj_A 6-phosphogluconate dehy 90.4 0.19 6.5E-06 44.2 3.7 33 9-41 7-39 (297)
479 3fbt_A Chorismate mutase and s 90.3 0.25 8.5E-06 43.0 4.3 34 7-40 122-156 (282)
480 1y8q_A Ubiquitin-like 1 activa 90.3 0.27 9.3E-06 44.2 4.7 35 7-41 36-71 (346)
481 1tt5_B Ubiquitin-activating en 90.3 0.28 9.6E-06 45.5 4.8 35 7-41 40-75 (434)
482 3r6d_A NAD-dependent epimerase 90.2 0.39 1.3E-05 39.9 5.4 32 9-40 7-40 (221)
483 2d4a_B Malate dehydrogenase; a 90.2 0.3 1E-05 43.1 4.8 32 9-40 1-33 (308)
484 4id9_A Short-chain dehydrogena 90.2 0.31 1.1E-05 43.7 5.1 36 6-41 18-54 (347)
485 2zqz_A L-LDH, L-lactate dehydr 90.2 0.31 1.1E-05 43.4 5.0 35 5-39 7-43 (326)
486 2x0j_A Malate dehydrogenase; o 90.2 0.26 8.8E-06 43.1 4.3 32 9-40 2-35 (294)
487 1dhr_A Dihydropteridine reduct 90.0 0.31 1.1E-05 41.2 4.7 41 1-41 1-42 (241)
488 1nvt_A Shikimate 5'-dehydrogen 90.0 0.21 7.3E-06 43.6 3.7 31 8-39 129-159 (287)
489 3o8q_A Shikimate 5-dehydrogena 89.9 0.31 1.1E-05 42.4 4.6 33 7-39 126-159 (281)
490 3ond_A Adenosylhomocysteinase; 89.9 0.31 1.1E-05 45.6 4.8 32 8-39 266-297 (488)
491 3b1f_A Putative prephenate deh 89.8 0.29 1E-05 42.8 4.5 32 8-39 7-40 (290)
492 3tpc_A Short chain alcohol deh 89.8 0.41 1.4E-05 41.0 5.3 35 7-41 7-42 (257)
493 1npy_A Hypothetical shikimate 89.8 0.31 1E-05 42.2 4.4 32 8-39 120-152 (271)
494 2rir_A Dipicolinate synthase, 89.8 0.32 1.1E-05 42.8 4.7 33 7-39 157-189 (300)
495 2gdz_A NAD+-dependent 15-hydro 89.7 0.44 1.5E-05 41.0 5.5 39 1-39 1-40 (267)
496 3t4e_A Quinate/shikimate dehyd 89.7 0.37 1.3E-05 42.6 4.9 33 7-39 148-181 (312)
497 1mld_A Malate dehydrogenase; o 89.6 0.25 8.6E-06 43.8 3.9 32 9-40 2-36 (314)
498 3d4o_A Dipicolinate synthase s 89.6 0.34 1.2E-05 42.5 4.7 33 7-39 155-187 (293)
499 3sxp_A ADP-L-glycero-D-mannohe 89.6 0.44 1.5E-05 43.1 5.6 34 7-40 10-46 (362)
500 3nyw_A Putative oxidoreductase 89.5 0.36 1.2E-05 41.1 4.7 40 1-40 1-41 (250)
No 1
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=100.00 E-value=6.1e-46 Score=348.69 Aligned_cols=365 Identities=17% Similarity=0.187 Sum_probs=282.0
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCcccCCCceeecccCCCChHHHHHHHHHHHHHHHHHhCC
Q 015088 5 GEKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESRTIRATYPEDYYHPMVLESCLLWEQAQSEIGY 84 (413)
Q Consensus 5 ~~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~gg~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 84 (413)
+.++||+|||||++|+++|++|+ +|++|+|||++...+ .++|..+.+.+...+....+..+...+.+.|.++.+..+.
T Consensus 7 ~~~~dv~IIGaGi~Gls~A~~La-~G~~V~vlE~~~~~g-~~as~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 84 (381)
T 3nyc_A 7 PIEADYLVIGAGIAGASTGYWLS-AHGRVVVLEREAQPG-YHSTGRSAAHYTVAYGTPQVRALTAASRAFFDNPPAGFCE 84 (381)
T ss_dssp EEECSEEEECCSHHHHHHHHHHT-TTSCEEEECSSSSTT-SSGGGSCCCEECSSSSCHHHHHHHHHHHHHHHSCCTTSCS
T ss_pred CCcCCEEEECCcHHHHHHHHHHh-CCCCEEEEECCCCcc-ccccccccceeecccCCHHHHHHHHHHHHHHHHhhhhhCC
Confidence 34689999999999999999999 699999999986554 3566677788877777766778888888888887655432
Q ss_pred -eeEEeeceeeeCCCC-hhhHHHHHHHHhhCCCCccccCHHHHHHHcCCcccCCCCeEEEEecCCceeChHHHHHHHHHH
Q 015088 85 -KVYFKAHQFDMGPSE-NKSLRSVIASCRKNSVPHQVLDCRQVLEKYSGRIEIPENWVGVATELGGVIKPTKAVSMFQTL 162 (413)
Q Consensus 85 -~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 162 (413)
..+...+.+.....+ ...+....+.+...+++.+.++.+++.+.+|. +..+....+++.+.++.++|..++..|.+.
T Consensus 85 ~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~-l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 163 (381)
T 3nyc_A 85 HPLLSPRPEMVVDFSDDPEELRRQYESGKALVPQMRLLDAEQACSIVPV-LRRDKVFGATYDPTGADIDTDALHQGYLRG 163 (381)
T ss_dssp SCSEEECCEEEECSSCCHHHHHHHHHHHHHHCTTCEEECHHHHHHHSTT-BCGGGCCCEEEETTCEEECHHHHHHHHHHH
T ss_pred cccccccceEEEechHHHHHHHHHHHHHHHcCCCcEEeCHHHHHHhCCC-cccccceEEEEcCCCceECHHHHHHHHHHH
Confidence 235666766665433 34456667777788888999999999999887 543335578899999999999999999999
Q ss_pred HHHCCCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCChHHhhhhhcCCc-cceeEEEEEEEEEEecC
Q 015088 163 AIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWVGKLVKRITGLE-LPIQAVETTVCYWRIKE 241 (413)
Q Consensus 163 ~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s~~l~~~~~g~~-~~~~~~~g~~~~~~~~~ 241 (413)
+++.|++|+++++|++|.. + ++.+.|++.+| +++||.||+|+|.|+..+.+.+ +.. +|+.|.+++++.++.++
T Consensus 164 a~~~Gv~i~~~~~V~~i~~--~--~~~~~V~t~~g-~i~a~~VV~A~G~~s~~l~~~~-g~~~~~~~p~rg~~~~~~~~~ 237 (381)
T 3nyc_A 164 IRRNQGQVLCNHEALEIRR--V--DGAWEVRCDAG-SYRAAVLVNAAGAWCDAIAGLA-GVRPLGLQPKRRSAFIFAPPP 237 (381)
T ss_dssp HHHTTCEEESSCCCCEEEE--E--TTEEEEECSSE-EEEESEEEECCGGGHHHHHHHH-TCCCCCCEEEEEEEEEECCCT
T ss_pred HHHCCCEEEcCCEEEEEEE--e--CCeEEEEeCCC-EEEcCEEEECCChhHHHHHHHh-CCCCCceeeeEEEEEEECCCc
Confidence 9999999999999999988 6 45688999888 5999999999999999998887 776 79999999998876543
Q ss_pred CCCCccccCCCCCeEEEcCCCceEecCCCCCCCcEEEecCCCCCCCCCCCCCCCchhHHHHHHHHHhhcCCCCCCCCCee
Q 015088 242 GNEADYAVGGDFPSFASYGDPYIYGTPSLEYPGLIKIALHGGYPCDPDRRPWGPGLLLDSLKEWIQGRFAGRVDSNGPVA 321 (413)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~y~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~ 321 (413)
... . ..+|.+...+ ..+|++|.. +.+.++.......++.....+ ....+.+.+.+.. +|.+.+. ++..
T Consensus 238 ~~~----~-~~~p~~~~~~-~~~y~~p~~---g~~~ig~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~l~~~-~~~~ 305 (381)
T 3nyc_A 238 GID----C-HDWPMLVSLD-ESFYLKPDA---GMLLGSPANADPVEAHDVQPE-QLDIATGMYLIEE-ATTLTIR-RPEH 305 (381)
T ss_dssp TCC----C-TTCCEEEETT-SSCEEEEET---TEEEEECCCCEECCSSCCCCC-HHHHHHHHHHHHH-HBSCCCC-CCSE
T ss_pred CCC----c-CccceEEeCC-CCEEEEeCC---CcEEEeCCcCCCCCcccCCCC-hHHHHHHHHHHHh-cCCCccc-ceee
Confidence 211 1 2356665443 347898875 334444432221111111111 1145677777766 5666653 6788
Q ss_pred eceeeeeecCCCCeEecCCCCCCCCCEEEEeCCCCCCCccchHHHHHHHHHHhcCCCCc------cccccccccccc
Q 015088 322 TQLCMYSITPDEDFVIDFLGGEFGEDVVVAGGFSGHGFKMAPAVGRILADLVLSGEAQG------VELQHFRISRFK 392 (413)
Q Consensus 322 ~~~g~~~~t~d~~p~ig~~~~~~~~~~~~~~G~~~~G~~~a~~~a~~la~~i~~g~~~~------~~~~~~~~~R~~ 392 (413)
.|+|+||+|+|+.|+||++|.. +|+|+++||+|+|+++||++|+++|++|.++.++. .+++.|+|+||.
T Consensus 306 ~w~G~r~~t~D~~p~ig~~~~~--~~l~~a~G~~g~G~~~ap~~g~~la~~i~g~~~~~~~~~~~~d~~~~~~~Rf~ 380 (381)
T 3nyc_A 306 TWAGLRSFVADGDLVAGYAANA--EGFFWVAAQGGYGIQTSAAMGEASAALIRHQPLPAHLREHGLDEAMLSPRRLS 380 (381)
T ss_dssp EEEEEEEECTTSCCEEEECTTS--TTEEEEECCTTCTTTTHHHHHHHHHHHHTTCCCCHHHHTTTCCHHHHCGGGGC
T ss_pred eeEEccccCCCCCceecCCCCC--CCeEEEEcCCChhHhhCHHHHHHHHHHHhCCCCCcccccccCcccccCccccC
Confidence 9999999999999999999987 99999999999999999999999999998555531 579999999995
No 2
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=100.00 E-value=1.4e-45 Score=347.15 Aligned_cols=372 Identities=33% Similarity=0.567 Sum_probs=289.9
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCcccCCCceeecccCC-CChHHHHHHHHHHHHHHHHHhCCe
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESRTIRATYPE-DYYHPMVLESCLLWEQAQSEIGYK 85 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~gg~~~s~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~ 85 (413)
++||+|||||++|+++|++|+++|++|+|||+...++..++|....+.++..+.. ..+..+...+.+.|+++.+..+.+
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~ 82 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDPPHTNGSHHGDTRIIRHAYGEGREYVPLALRSQELWYELEKETHHK 82 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSSCSSSSSCSSEEEECSSCTTCGGGHHHHHHHHHHHHHHHHHCSSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCcchhhhhhhcCCchHHHHHHHHHHHHHHHHHHhCCc
Confidence 5899999999999999999999999999999988765345666666666655433 356788889999999998887766
Q ss_pred eEEeeceeeeCCC-ChhhHHHHHHHHhhCCCCccccCHHHHHHHcCCcccCCCCeEEEEecCCceeChHHHHHHHHHHHH
Q 015088 86 VYFKAHQFDMGPS-ENKSLRSVIASCRKNSVPHQVLDCRQVLEKYSGRIEIPENWVGVATELGGVIKPTKAVSMFQTLAI 164 (413)
Q Consensus 86 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 164 (413)
.+...+.+.+... ....+....+.....+++.+.++.+++.+.+|. +..+....+++.+.+++++|..+++.|.+.++
T Consensus 83 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 161 (389)
T 2gf3_A 83 IFTKTGVLVFGPKGESAFVAETMEAAKEHSLTVDLLEGDEINKRWPG-ITVPENYNAIFEPNSGVLFSENCIRAYRELAE 161 (389)
T ss_dssp CEECCCEEEEEETTCCHHHHHHHHHHHHTTCCCEEEETHHHHHHSTT-CCCCTTEEEEEETTCEEEEHHHHHHHHHHHHH
T ss_pred ceeecceEEEcCCCchHHHHHHHHHHHHcCCCcEEcCHHHHHHhCCC-cccCCCceEEEeCCCcEEeHHHHHHHHHHHHH
Confidence 6666666665443 334456666677788888889999999988887 55556677889999999999999999999999
Q ss_pred HCCCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCChHHhhhhhcCCccceeEEEEEEEEEEecCCCC
Q 015088 165 KNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWVGKLVKRITGLELPIQAVETTVCYWRIKEGNE 244 (413)
Q Consensus 165 ~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s~~l~~~~~g~~~~~~~~~g~~~~~~~~~~~~ 244 (413)
+.|++++++++|+++.. + ++.+.|++.+| +++||.||+|+|.|+..+++.+ +..+|+.+.++++++++.+..
T Consensus 162 ~~Gv~i~~~~~v~~i~~--~--~~~~~v~~~~g-~~~a~~vV~A~G~~~~~l~~~~-g~~~pl~~~rg~~~~~~~~~~-- 233 (389)
T 2gf3_A 162 ARGAKVLTHTRVEDFDI--S--PDSVKIETANG-SYTADKLIVSMGAWNSKLLSKL-NLDIPLQPYRQVVGFFESDES-- 233 (389)
T ss_dssp HTTCEEECSCCEEEEEE--C--SSCEEEEETTE-EEEEEEEEECCGGGHHHHGGGG-TEECCCEEEEEEEEEECCCHH--
T ss_pred HCCCEEEcCcEEEEEEe--c--CCeEEEEeCCC-EEEeCEEEEecCccHHHHhhhh-ccCCceEEEEEEEEEEecCcc--
Confidence 99999999999999988 6 34577888777 4999999999999999888876 777899999999998864320
Q ss_pred CccccCCCCCeEEEc-CCCceEecCCCCCCCcEEEec-CCCCCCCCCCCCCC---CchhHHHHHHHHHhhcCCCCCCCCC
Q 015088 245 ADYAVGGDFPSFASY-GDPYIYGTPSLEYPGLIKIAL-HGGYPCDPDRRPWG---PGLLLDSLKEWIQGRFAGRVDSNGP 319 (413)
Q Consensus 245 ~~~~~~~~~~~~~~~-~~~~~y~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~l~~~~~~~~p~~~~~~~~ 319 (413)
.+.....+|.+... .+..+|++|..+..+ +.+|. ..+...+|+..+.. ..+..+.+.+.+.+++|.+.+ .+
T Consensus 234 -~~~~~~~~p~~~~~~~~~~~y~~p~~~g~~-~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~P~l~~--~~ 309 (389)
T 2gf3_A 234 -KYSNDIDFPGFMVEVPNGIYYGFPSFGGCG-LKLGYHTFGQKIDPDTINREFGVYPEDESNLRAFLEEYMPGANG--EL 309 (389)
T ss_dssp -HHBGGGTCCEEEEEETTEEEEEECBSTTCC-EEEEESSCCEECCTTTCCCCTTSSHHHHHHHHHHHHHHCGGGCS--CE
T ss_pred -cccccccCCEEEEeCCCCcEEEcCCCCCCc-EEEEEcCCCCccCcccccCccCCCHHHHHHHHHHHHHhCCCCCC--Cc
Confidence 11000125655433 222579988765323 44443 22222233222211 123678999999999999874 57
Q ss_pred eeeceeeeeecCCCCeEecCCCCCCCCCEEEEeCCCCCCCccchHHHHHHHHHHhcCCCCccccccccccccccC
Q 015088 320 VATQLCMYSITPDEDFVIDFLGGEFGEDVVVAGGFSGHGFKMAPAVGRILADLVLSGEAQGVELQHFRISRFKEN 394 (413)
Q Consensus 320 ~~~~~g~~~~t~d~~p~ig~~~~~~~~~~~~~~G~~~~G~~~a~~~a~~la~~i~~g~~~~~~~~~~~~~R~~~~ 394 (413)
...|+|+|+.|+|+.|+||++|.. +|+|+++|++|+|++++|++|+++|++|.++.+ +.+++.|+|+||...
T Consensus 310 ~~~w~g~r~~t~D~~p~ig~~~~~--~~l~~a~G~~g~G~~~ap~~g~~la~~i~~~~~-~~~~~~~~~~Rf~~~ 381 (389)
T 2gf3_A 310 KRGAVCMYTKTLDEHFIIDLHPEH--SNVVIAAGFSGHGFKFSSGVGEVLSQLALTGKT-EHDISIFSINRPALK 381 (389)
T ss_dssp EEEEEEEEEECTTSCCEEEEETTE--EEEEEEECCTTCCGGGHHHHHHHHHHHHHHSCC-SSCCGGGCTTCGGGT
T ss_pred eEEEEEEeccCCCCCeEEccCCCC--CCEEEEECCccccccccHHHHHHHHHHHcCCCC-CCCcccccccccccc
Confidence 789999999999999999999877 899999999999999999999999999995554 678899999999765
No 3
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=100.00 E-value=3.3e-45 Score=343.77 Aligned_cols=373 Identities=23% Similarity=0.294 Sum_probs=286.6
Q ss_pred CCCcccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCcccCCCceeecccCCCChHHHHHHHHHHHHHHHHHhC
Q 015088 4 PGEKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESRTIRATYPEDYYHPMVLESCLLWEQAQSEIG 83 (413)
Q Consensus 4 ~~~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~gg~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 83 (413)
|+.++||+|||||++|+++|++|+++|++|+|||+.... .++|..+.+.++..+.......+...+.+.|+++.+..+
T Consensus 2 m~~~~dVvIIGgGi~Gl~~A~~La~~G~~V~lle~~~~~--~gas~~~~g~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~ 79 (382)
T 1y56_B 2 LPEKSEIVVIGGGIVGVTIAHELAKRGEEVTVIEKRFIG--SGSTFRCGTGIRQQFNDEANVRVMKRSVELWKKYSEEYG 79 (382)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTT--CSHHHHCCCCCCCCCSSHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCC--CCccccccCeeeecCCChHHHHHHHHHHHHHHHHHHHhC
Confidence 445799999999999999999999999999999998544 356666667777666666566778888999999988877
Q ss_pred CeeEEeeceeeeCCCC--hhhHHHHHHHHhhCCCCccccCHHHHHHHcCCcccCCCCeEEEEecCCceeChHHHHHHHHH
Q 015088 84 YKVYFKAHQFDMGPSE--NKSLRSVIASCRKNSVPHQVLDCRQVLEKYSGRIEIPENWVGVATELGGVIKPTKAVSMFQT 161 (413)
Q Consensus 84 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 161 (413)
. .+...+.+...... .+.+....+.+...+.+.+.++.+++.+.+|. +..+....+++.+.++.++|..+++.|.+
T Consensus 80 ~-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 157 (382)
T 1y56_B 80 F-SFKQTGYLFLLYDDEEVKTFKRNIEIQNKFGVPTKLITPEEAKEIVPL-LDISEVIAASWNPTDGKADPFEATTAFAV 157 (382)
T ss_dssp C-CEECCCEEEEECSHHHHHHHHHHHHHHHHTTCCCEEECHHHHHHSSTT-CCCTTCCEEEEETTCCEECHHHHHHHHHH
T ss_pred C-CeeccceEEEEeCHHHHHHHHHHHHHHHhcCCCcEEeCHHHHHHhCCC-CCcccceEEEEcCCCeeECHHHHHHHHHH
Confidence 6 44555665554332 23345556667778988899999999888886 44345567888899999999999999999
Q ss_pred HHHHCCCEEEcCceEEEEEEecccCCCeEE-EEcCCCcEEEcCEEEEcCCCChHHhhhhhcCCc--cceeEEEEEEEEEE
Q 015088 162 LAIKNGAVLRDNMEVKTVLKVKDAVKGGVT-VVTSNGEKFWGKKCVVTAGAWVGKLVKRITGLE--LPIQAVETTVCYWR 238 (413)
Q Consensus 162 ~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~-v~~~~g~~i~ad~VV~A~G~~s~~l~~~~~g~~--~~~~~~~g~~~~~~ 238 (413)
.+++.|++++++++|+++.. + ++.+. |++.+| +++||.||+|+|.|+..+.+.+ +.. +|+.+.+++++.++
T Consensus 158 ~~~~~Gv~i~~~~~v~~i~~--~--~~~v~gv~~~~g-~i~a~~VV~A~G~~s~~l~~~~-g~~~~~~~~~~~g~~~~~~ 231 (382)
T 1y56_B 158 KAKEYGAKLLEYTEVKGFLI--E--NNEIKGVKTNKG-IIKTGIVVNATNAWANLINAMA-GIKTKIPIEPYKHQAVITQ 231 (382)
T ss_dssp HHHHTTCEEECSCCEEEEEE--S--SSBEEEEEETTE-EEECSEEEECCGGGHHHHHHHH-TCCSCCCCEEEEEEEEEEC
T ss_pred HHHHCCCEEECCceEEEEEE--E--CCEEEEEEECCc-EEECCEEEECcchhHHHHHHHc-CCCcCcCCCeeEeEEEEEc
Confidence 99999999999999999988 6 34555 888888 5999999999999998888776 877 89999999988776
Q ss_pred ecCCCCCccccCCCCCeEEEcCCCceEecCCCCCCCcEEEecCCCCCCCCCCCCCCCchhHHHHHHHHHhhcCCCCCCCC
Q 015088 239 IKEGNEADYAVGGDFPSFASYGDPYIYGTPSLEYPGLIKIALHGGYPCDPDRRPWGPGLLLDSLKEWIQGRFAGRVDSNG 318 (413)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~ 318 (413)
.... .. ..+.+.......+|++|..+ |++.++.......+.+ .. ...+..+.+.+.+.+++|.+.+. +
T Consensus 232 ~~~~----~~---~~~~~~~~~~~~~y~~p~~~--g~~iG~~~~~~~~~~~-~~-~~~~~~~~l~~~~~~~~p~l~~~-~ 299 (382)
T 1y56_B 232 PIKR----GT---INPMVISFKYGHAYLTQTFH--GGIIGGIGYEIGPTYD-LT-PTYEFLREVSYYFTKIIPALKNL-L 299 (382)
T ss_dssp CCST----TS---SCSEEEESTTTTEEEECCSS--SCCEEECSCCBSSCCC-CC-CCHHHHHHHHHHHHHHCGGGGGS-E
T ss_pred cCCc----cc---CCCeEEecCCCeEEEEEeCC--eEEEecCCCCCCCCCC-CC-CCHHHHHHHHHHHHHhCCCcCCC-C
Confidence 3221 10 12445443324589999865 4444422111111111 11 11236788999999999988764 6
Q ss_pred CeeeceeeeeecCCCCeEecCCCCCCCCCEEEEeCCCCCCCccchHHHHHHHHHHhcCCCCccccccccccccccCCCCC
Q 015088 319 PVATQLCMYSITPDEDFVIDFLGGEFGEDVVVAGGFSGHGFKMAPAVGRILADLVLSGEAQGVELQHFRISRFKENPKGN 398 (413)
Q Consensus 319 ~~~~~~g~~~~t~d~~p~ig~~~~~~~~~~~~~~G~~~~G~~~a~~~a~~la~~i~~g~~~~~~~~~~~~~R~~~~~~~~ 398 (413)
+...|+|+||.|+|+.|+||++|.. +|+|+++|++|+|+++||++|+++|++|.++.+ ..+++.|+|+||...++..
T Consensus 300 ~~~~~~g~r~~t~d~~p~ig~~~~~--~~~~~~~G~~g~G~~~a~~~g~~la~~i~~~~~-~~~~~~~~~~Rf~~~~~~~ 376 (382)
T 1y56_B 300 ILRTWAGYYAKTPDSNPAIGRIEEL--NDYYIAAGFSGHGFMMAPAVGEMVAELITKGKT-KLPVEWYDPYRFERGELRT 376 (382)
T ss_dssp EEEEEEEEEEECTTSCCEEEEESSS--BTEEEEECCTTCHHHHHHHHHHHHHHHHHHSSC-SSCGGGGCGGGTTTTCCC-
T ss_pred ceEEEEeccccCCCCCcEeccCCCC--CCEEEEEecCcchHhhhHHHHHHHHHHHhCCCC-cCcccccCHhhhccCCCCC
Confidence 7789999999999999999999977 899999999999999999999999999995554 5689999999999988776
Q ss_pred Ccc
Q 015088 399 VKD 401 (413)
Q Consensus 399 ~~~ 401 (413)
|+.
T Consensus 377 ~~~ 379 (382)
T 1y56_B 377 AAL 379 (382)
T ss_dssp ---
T ss_pred ccc
Confidence 654
No 4
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=100.00 E-value=4.5e-44 Score=337.69 Aligned_cols=368 Identities=24% Similarity=0.412 Sum_probs=283.0
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCcccCCCceeecccCCCChHHHHHHHHHHHHHHHHHhCCe
Q 015088 6 EKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESRTIRATYPEDYYHPMVLESCLLWEQAQSEIGYK 85 (413)
Q Consensus 6 ~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~gg~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 85 (413)
.++||+|||||++|+++|++|+++|++|+|||+....+..+++....+.+...+....+..+...+...|.++.+..+..
T Consensus 3 ~~~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~~~~~~gas~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 82 (397)
T 2oln_A 3 ESYDVVVVGGGPVGLATAWQVAERGHRVLVLERHTFFNENGGTSGAERHWRLQYTQEDLFRLTLETLPLWRALESRCERR 82 (397)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTCSSSSCCSSEEEECSCCSSHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCCCCCCCCcCeEEEeccCcchhhhHHHHHHHHHHHHHHHhCcc
Confidence 36899999999999999999999999999999988764345666666666555555556677788889999998887766
Q ss_pred eEEeeceeeeCCCCh----hhHHHHHHHHhhCCCCccccCHHHHHHHcCCcccCCCCeEEEEecCCceeChHHHHHHHHH
Q 015088 86 VYFKAHQFDMGPSEN----KSLRSVIASCRKNSVPHQVLDCRQVLEKYSGRIEIPENWVGVATELGGVIKPTKAVSMFQT 161 (413)
Q Consensus 86 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 161 (413)
++...+.+....... ..+....+.+...+.+.+.++.+++.+.+|. +..+....+++.+.++.++|..++..|.+
T Consensus 83 ~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~-~~~~~~~~~~~~~~~g~~~~~~~~~~l~~ 161 (397)
T 2oln_A 83 LIHEIGSLWFGDTDVVTNEGQISGTAAMMDKLSVRYEWLKATDIERRFGF-RGLPRDYEGFLQPDGGTIDVRGTLAALFT 161 (397)
T ss_dssp CEECCCEEEEECSSCCBTTBCHHHHHHHHHHTTCCCEEEEHHHHHHHHCC-CSCCTTCEEEEETTCEEEEHHHHHHHHHH
T ss_pred HHHHCCcEEEcCCCccchhHHHHHHHHHHHHcCCCceecCHHHHHhhCcC-ccCCCceeEEEcCCCCEEcHHHHHHHHHH
Confidence 666666666554332 4456667777778888888898888888887 55455677889999999999999999999
Q ss_pred HHHHCCCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCChHHhhhhhcCCccceeEEEEEEEEEEecC
Q 015088 162 LAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWVGKLVKRITGLELPIQAVETTVCYWRIKE 241 (413)
Q Consensus 162 ~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s~~l~~~~~g~~~~~~~~~g~~~~~~~~~ 241 (413)
.+++.|++++++++|++|.. + ++.+.|.+.+++ ++||.||+|+|+|+..+++.+ +..+|+.+.++++++++.+.
T Consensus 162 ~a~~~Gv~i~~~~~V~~i~~--~--~~~v~v~t~~g~-i~a~~VV~A~G~~s~~l~~~~-g~~~p~~~~~~~~~~~~~~~ 235 (397)
T 2oln_A 162 LAQAAGATLRAGETVTELVP--D--ADGVSVTTDRGT-YRAGKVVLACGPYTNDLLEPL-GARLAYSVYEMAIAAYRQAT 235 (397)
T ss_dssp HHHHTTCEEEESCCEEEEEE--E--TTEEEEEESSCE-EEEEEEEECCGGGHHHHHGGG-TCCCCEEEEEEEEEEEEBCS
T ss_pred HHHHcCCEEECCCEEEEEEE--c--CCeEEEEECCCE-EEcCEEEEcCCcChHHHhhhc-CCCCCeeEEEEEEEEEeecC
Confidence 99999999999999999988 6 456778887774 999999999999998888877 88899999999999887443
Q ss_pred CCCCccccCCCCCeEEEcC-CC-----ceEecCCCCCCC--cEEEecCC--CCCCCCCCCCCC-CchhHHHHHHHHHhhc
Q 015088 242 GNEADYAVGGDFPSFASYG-DP-----YIYGTPSLEYPG--LIKIALHG--GYPCDPDRRPWG-PGLLLDSLKEWIQGRF 310 (413)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~-~~-----~~y~~p~~~~~~--~~~~~~~~--~~~~~~~~~~~~-~~~~~~~l~~~~~~~~ 310 (413)
. .+ .+|.+.... .. .+|++|..+..+ .+++|.+. +...+++..+.. ..+..+.+.+.+.++|
T Consensus 236 ~---~~----~~p~~~~~~~~~~~~~~~~y~~p~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 308 (397)
T 2oln_A 236 P---VT----EAPFWFAFQQPTPQDTNLFYGFGHNPWAPGEFVRCGPDFEVDPLDHPSAATGVADRRQMDRLSGWLRDHL 308 (397)
T ss_dssp C---CS----CCCEEEEECCCCSSSCCCEEECCCCSSSSSSEEEEEECCCCSCCSSGGGCCSSCCHHHHHHHHHHHHHHC
T ss_pred c---cc----CCCEEEEecCCCCcccceEEECCCCCCCCCceEEEEecCCCCCcCCCccccCCCCHHHHHHHHHHHHHhC
Confidence 1 11 256554322 11 589999765321 45555322 222223222221 1236788999999999
Q ss_pred CCCCCCCCCeeeceeeee--ecCCCCeEecCCCC----CCCCCEEEEeCCCCCCCccchHHHHHHHHHHhcCCCCccccc
Q 015088 311 AGRVDSNGPVATQLCMYS--ITPDEDFVIDFLGG----EFGEDVVVAGGFSGHGFKMAPAVGRILADLVLSGEAQGVELQ 384 (413)
Q Consensus 311 p~~~~~~~~~~~~~g~~~--~t~d~~p~ig~~~~----~~~~~~~~~~G~~~~G~~~a~~~a~~la~~i~~g~~~~~~~~ 384 (413)
|.+.+ .+...|+|+++ +|+|+.|+||++|. . +|+|+++| |+|++++|++|+++|++|.++.+ ..+++
T Consensus 309 p~l~~--~~~~~~~g~~~~p~t~D~~p~ig~~~~~~~~~--~~l~~a~G--g~G~~~ap~~g~~la~~i~~~~~-~~~~~ 381 (397)
T 2oln_A 309 PTVDP--DPVRTSTCLAVLPTDPERQFFLGTARDLMTHG--EKLVVYGA--GWAFKFVPLFGRICADLAVEDST-AYDIS 381 (397)
T ss_dssp TTBCS--SCSEEEEEEEEEESSTTCCCEEEESTTTSTTG--GGEEEEEE--SSCGGGHHHHHHHHHHHHHHSCC-SSCCG
T ss_pred CCCCC--CceeEEEEEecCCcCCCCCeEeecCCccccCC--CCEEEEeC--cchhhccHHHHHHHHHHHhCCCC-CCCcc
Confidence 99874 46778999988 99999999999986 6 89999999 69999999999999999995554 67899
Q ss_pred cccccccccC
Q 015088 385 HFRISRFKEN 394 (413)
Q Consensus 385 ~~~~~R~~~~ 394 (413)
.|+++||...
T Consensus 382 ~f~~~Rf~~~ 391 (397)
T 2oln_A 382 RLAPQSALLE 391 (397)
T ss_dssp GGSCCC----
T ss_pred ccccChhhhh
Confidence 9999999653
No 5
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=100.00 E-value=1.4e-44 Score=338.39 Aligned_cols=362 Identities=30% Similarity=0.583 Sum_probs=280.1
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCcccCCCceeecccCC-CChHHHHHHHHHHHHHHHHHhCC-
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESRTIRATYPE-DYYHPMVLESCLLWEQAQSEIGY- 84 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~gg~~~s~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~- 84 (413)
++||+|||||++|+++|++|+++|++|+|||+....++.+++++..+.++..+.. ..+..+...+.+.|+++. +.+.
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~-~~~~~ 80 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMPPHQHGSHHGDTRLIRHAYGEGEKYVPLVLRAQMLWDELS-RHNED 80 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHTTCCEEEECSSCSSSSSSSCCSSEEEECSSCTTCGGGHHHHHHHHHHHHHHH-TTCSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCccceeeeccCCCchHHHHHHHHHHHHHHHH-HhCCC
Confidence 4899999999999999999999999999999998776555665555566543332 456778888999999988 6665
Q ss_pred -eeEEeeceeeeCCCChhhHHHHHHHHhhCCCCccccCHHHHHHHcCCcccCCCCeEEEEecCCceeChHHHHHHHHHHH
Q 015088 85 -KVYFKAHQFDMGPSENKSLRSVIASCRKNSVPHQVLDCRQVLEKYSGRIEIPENWVGVATELGGVIKPTKAVSMFQTLA 163 (413)
Q Consensus 85 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 163 (413)
..+...+.+.+.....+.+....+.++..+.+.+.++.+++.+.+|. +..+....+++.+.+++++|..+++.|.+.+
T Consensus 81 ~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~-~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~ 159 (372)
T 2uzz_A 81 DPIFVRSGVINLGPADSTFLANVAHSAEQWQLNVEKLDAQGIMARWPE-IRVPDNYIGLFETDSGFLRSELAIKTWIQLA 159 (372)
T ss_dssp SCSEECCCEEEEEETTCHHHHHHHHHHHHTTCCEEEEEHHHHHHHCTT-CCCCTTEEEEEESSCEEEEHHHHHHHHHHHH
T ss_pred ccceeeeceEEEeCCCcHHHHHHHHHHHHcCCCcEecCHHHHHhhCCC-ccCCCCceEEEeCCCcEEcHHHHHHHHHHHH
Confidence 44566676666554445566667777888999999999999999887 5556667789999999999999999999999
Q ss_pred HHCCCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCChHHhhhhhcCCccceeEEEEEEEEEEecCCC
Q 015088 164 IKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWVGKLVKRITGLELPIQAVETTVCYWRIKEGN 243 (413)
Q Consensus 164 ~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s~~l~~~~~g~~~~~~~~~g~~~~~~~~~~~ 243 (413)
++.|++++++++|++|.. + ++.+.|++.+|+ ++||.||+|+|.|+..+++ .+|+.|.++++++++.+..
T Consensus 160 ~~~G~~i~~~~~V~~i~~--~--~~~~~v~~~~g~-~~a~~vV~a~G~~s~~l~~-----~l~~~p~rg~~~~~~~~~~- 228 (372)
T 2uzz_A 160 KEAGCAQLFNCPVTAIRH--D--DDGVTIETADGE-YQAKKAIVCAGTWVKDLLP-----ELPVQPVRKVFAWYQADGR- 228 (372)
T ss_dssp HHTTCEEECSCCEEEEEE--C--SSSEEEEESSCE-EEEEEEEECCGGGGGGTST-----TCCCEEEECCEEEECCCGG-
T ss_pred HHCCCEEEcCCEEEEEEE--c--CCEEEEEECCCe-EEcCEEEEcCCccHHhhcc-----ccCceEEEEEEEEEEeccc-
Confidence 999999999999999988 6 345788888886 9999999999999987765 3489999999988774321
Q ss_pred CCccccCCCCCeEEEc--CCCceEecCCCCCCCcEEEecCC-CCCCCC--CCCCCCC-chhHHHHHHHHHhhcCCCCCCC
Q 015088 244 EADYAVGGDFPSFASY--GDPYIYGTPSLEYPGLIKIALHG-GYPCDP--DRRPWGP-GLLLDSLKEWIQGRFAGRVDSN 317 (413)
Q Consensus 244 ~~~~~~~~~~~~~~~~--~~~~~y~~p~~~~~~~~~~~~~~-~~~~~~--~~~~~~~-~~~~~~l~~~~~~~~p~~~~~~ 317 (413)
+.....+|.+... +....|++|..+ +.+.+|.+. +...++ +..+... .+..+.+.+.+.+++|.+.
T Consensus 229 ---~~~~~~~p~~~~~~~~~~~~y~~p~~~--~~~~iG~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~P~l~--- 300 (372)
T 2uzz_A 229 ---YSVKNKFPAFTGELPNGDQYYGFPAEN--DALKIGKHNGGQVIHSADERVPFAEVVSDGSEAFPFLRNVLPGIG--- 300 (372)
T ss_dssp ---GSTTTTCCEEEEECTTCCEEEEECCSS--SCEEEEESSCCEECCSGGGCCCTTTSTTGGGSSHHHHHHHSCSCC---
T ss_pred ---cCccccCCEEEEecCCCCeEEecCCCC--CeEEEEecCCCCccCChhhccCCCCCHHHHHHHHHHHHHHCCCCC---
Confidence 1111125655432 223578888754 334444422 111111 1111111 1256778999999999887
Q ss_pred CCeeeceeeeeecCCCCeEecCCCCCCCCCEEEEeCCCCCCCccchHHHHHHHHHHhcCCCCccccccccccccc
Q 015088 318 GPVATQLCMYSITPDEDFVIDFLGGEFGEDVVVAGGFSGHGFKMAPAVGRILADLVLSGEAQGVELQHFRISRFK 392 (413)
Q Consensus 318 ~~~~~~~g~~~~t~d~~p~ig~~~~~~~~~~~~~~G~~~~G~~~a~~~a~~la~~i~~g~~~~~~~~~~~~~R~~ 392 (413)
.+...|+|+|+.|+|+.|+||++|+. +|+|+++||+|+|++++|++|+++|++|.++ .++.+++.|+|+||.
T Consensus 301 ~~~~~~~g~r~~t~d~~p~ig~~~~~--~~l~~~~G~~g~G~~~ap~~g~~la~~i~~~-~~~~~~~~~~~~Rf~ 372 (372)
T 2uzz_A 301 CCLYGAACTYDNSPDEDFIIDTLPGH--DNTLLITGLSGHGFKFASVLGEIAADFAQDK-KSDFDLTPFRLSRFQ 372 (372)
T ss_dssp CEEEECCCEEEECTTSCCCEEEETTE--EEEEEECCCCSCCGGGHHHHHHHHHHHHTTC-CCSSCCGGGCSTTCC
T ss_pred ccceeeEEeeccCCCCCeEEecCCCC--CCEEEEeCCCccchhccHHHHHHHHHHHhCC-CCCCCccccCcCCCC
Confidence 35778999999999999999999877 8999999999999999999999999999854 446789999999994
No 6
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=100.00 E-value=7.5e-42 Score=323.51 Aligned_cols=372 Identities=21% Similarity=0.200 Sum_probs=287.5
Q ss_pred CCcccEEEECCCHHHHHHHHHHHH-cC-CcEEEEcccCCCCCCCcccCCCceeecccCCCChHHHHHHHHHHHHHHHHHh
Q 015088 5 GEKFDVIVVGAGIMGSSAAYQLAK-RG-QKTLLLEQFDFLHHRGSSHGESRTIRATYPEDYYHPMVLESCLLWEQAQSEI 82 (413)
Q Consensus 5 ~~~~dvvIIGaG~aG~~~A~~L~~-~g-~~V~liE~~~~~gg~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 82 (413)
+.++||+|||||++|+++|++|++ +| ++|+|||++... .++|..+.+.+...+.......+...+.+.|.++.+..
T Consensus 19 ~~~~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~~~~--~gas~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 96 (405)
T 2gag_B 19 KKSYDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGWLA--GGNMARNTTIIRSNYLWDESAGIYEKSLKLWEQLPEDL 96 (405)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSSSTT--CSGGGTSCCCBCCCCSSHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCCCCC--CCcccccCceeeecCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 346899999999999999999999 99 999999999854 35666677777776666666777888889999998887
Q ss_pred CCee-EEeeceeeeCCCC--hhhHHHHHHHHhhCCCCccccCHHHHHHHcCCcccC-----CCCeEEEEecCCceeChHH
Q 015088 83 GYKV-YFKAHQFDMGPSE--NKSLRSVIASCRKNSVPHQVLDCRQVLEKYSGRIEI-----PENWVGVATELGGVIKPTK 154 (413)
Q Consensus 83 ~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 154 (413)
+.++ +...+.+...... .+.+....+.+...+.+.+.++.+++.+.+|. +.. .....+++.+.+++++|..
T Consensus 97 ~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (405)
T 2gag_B 97 EYDFLFSQRGVLNLAHTLGDVRESVRRVEANKLNGVDAEWLDPSQVKEACPI-INTSDDIRYPVMGATWQPRAGIAKHDH 175 (405)
T ss_dssp TCCCCCBCCCEEEEECSHHHHHHHHHHHHHHHTBTCCCEEECHHHHHHHCTT-SCCSTTSSSCCCEEEEETTCBBCCHHH
T ss_pred CCCcCEecccEEEEEcCHHHHHHHHHHHHHHHhcCCCceEeCHHHHHhhCCC-CcccccccccceeEEEeCCCccCCHHH
Confidence 7665 3344555544332 23345566667788888899999999988886 443 2456788899999999999
Q ss_pred HHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCChHHhhhhhcCCccceeEEEEEE
Q 015088 155 AVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWVGKLVKRITGLELPIQAVETTV 234 (413)
Q Consensus 155 ~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s~~l~~~~~g~~~~~~~~~g~~ 234 (413)
+++.|.+.+++.|++++++++|+++.. ++ +..+.|++.+|+ ++||.||+|+|.|+..+.+.+ +..+|+.+.++++
T Consensus 176 ~~~~l~~~~~~~g~~i~~~~~v~~i~~--~~-~~~~~v~~~~g~-~~a~~vV~a~G~~s~~l~~~~-g~~~~~~~~~~~~ 250 (405)
T 2gag_B 176 VAWAFARKANEMGVDIIQNCEVTGFIK--DG-EKVTGVKTTRGT-IHAGKVALAGAGHSSVLAEMA-GFELPIQSHPLQA 250 (405)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEE--SS-SBEEEEEETTCC-EEEEEEEECCGGGHHHHHHHH-TCCCCEEEEEEEE
T ss_pred HHHHHHHHHHHCCCEEEcCCeEEEEEE--eC-CEEEEEEeCCce-EECCEEEECCchhHHHHHHHc-CCCCCccccceeE
Confidence 999999999999999999999999988 62 346778888884 999999999999998887776 8889999999998
Q ss_pred EEEEecCCCCCccccCCCCCeEEEcCCCceEecCCCCCCCcEEEecCCCCCCCCCCCCCCCchhHHHHHHHHHhhcCCCC
Q 015088 235 CYWRIKEGNEADYAVGGDFPSFASYGDPYIYGTPSLEYPGLIKIALHGGYPCDPDRRPWGPGLLLDSLKEWIQGRFAGRV 314 (413)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~ 314 (413)
+.++..... + .+.+.. .+..+|++|..+ +.+.++.......+.+ .. ...+..+.+.+.+.+++|.+.
T Consensus 251 ~~~~~~~~~---~-----~~~~~~-~~~~~y~~p~~~--g~~~ig~~~~~~~~~~-~~-~~~~~~~~l~~~~~~~~p~l~ 317 (405)
T 2gag_B 251 LVSELFEPV---H-----PTVVMS-NHIHVYVSQAHK--GELVMGAGIDSYNGYG-QR-GAFHVIQEQMAAAVELFPIFA 317 (405)
T ss_dssp EEEEEBCSC---C-----CSEEEE-TTTTEEEEECTT--SEEEEEEEECSSCCCS-SC-CCTHHHHHHHHHHHHHCGGGG
T ss_pred EEecCCccc---c-----CceEEe-CCCcEEEEEcCC--CcEEEEeccCCCCccc-cC-CCHHHHHHHHHHHHHhCCccc
Confidence 877522110 1 123322 334588888654 4444443211110111 11 112267889999999999887
Q ss_pred CCCCCeeeceeeeeecCCCCeEecCCCCCCCCCEEEEeCCCCCCCccchHHHHHHHHHHhcCCCCccccccccccccccC
Q 015088 315 DSNGPVATQLCMYSITPDEDFVIDFLGGEFGEDVVVAGGFSGHGFKMAPAVGRILADLVLSGEAQGVELQHFRISRFKEN 394 (413)
Q Consensus 315 ~~~~~~~~~~g~~~~t~d~~p~ig~~~~~~~~~~~~~~G~~~~G~~~a~~~a~~la~~i~~g~~~~~~~~~~~~~R~~~~ 394 (413)
+. ++...|+|+|++|+|+.|+||++| . +|+|+++|++|+|+++||.+|+++|++|.++.+ ..+++.|+|+||...
T Consensus 318 ~~-~~~~~w~g~~~~t~d~~p~ig~~~-~--~~l~~~~G~~g~G~~~a~~~g~~la~~i~g~~~-~~~~~~~~~~R~~~~ 392 (405)
T 2gag_B 318 RA-HVLRTWGGIVDTTMDASPIISKTP-I--QNLYVNCGWGTGGFKGTPGAGFTLAHTIANDEP-HELNKPFSLERFETG 392 (405)
T ss_dssp GC-EECEEEEEEEEEETTSCCEEEECS-S--BTEEEEECCGGGCSTTHHHHHHHHHHHHHHTSC-CTTTTTSCSTHHHHT
T ss_pred cC-CcceEEeeccccCCCCCCEecccC-C--CCEEEEecCCCchhhHHHHHHHHHHHHHhCCCC-CccccccCcchhcCC
Confidence 54 567799999999999999999987 4 899999999999999999999999999995554 568999999999998
Q ss_pred CCCCCccc
Q 015088 395 PKGNVKDY 402 (413)
Q Consensus 395 ~~~~~~~~ 402 (413)
++.++...
T Consensus 393 ~~~~~~~~ 400 (405)
T 2gag_B 393 HLIDEHGA 400 (405)
T ss_dssp CCCCCTTT
T ss_pred ccccCccc
Confidence 88877765
No 7
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=100.00 E-value=1.5e-41 Score=325.43 Aligned_cols=371 Identities=19% Similarity=0.206 Sum_probs=270.0
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcC-CcEEEEcccCCCCCCCcccCCCceeecccCCCChHHHHHHHHHHHHHHHHHhCC
Q 015088 6 EKFDVIVVGAGIMGSSAAYQLAKRG-QKTLLLEQFDFLHHRGSSHGESRTIRATYPEDYYHPMVLESCLLWEQAQSEIGY 84 (413)
Q Consensus 6 ~~~dvvIIGaG~aG~~~A~~L~~~g-~~V~liE~~~~~gg~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 84 (413)
.++||+|||||++|+++|++|+++| ++|+|||+....+ .++|..+.+.+...+.......+...+...|+++... +.
T Consensus 22 ~~~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~~~~~~-~g~S~~~~g~i~~~~~~~~~~~l~~~~~~~~~~l~~~-g~ 99 (448)
T 3axb_A 22 PRFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDAGHAPG-SGDSGRSMAAFRTFFSSTMNRLVAGSTVRLFEDAQRG-GE 99 (448)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHHCSCEEEEESSSSTT-CSGGGSSCCEEECCCSSHHHHHHHHHHHHHHHHHHHT-TC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCcEEEEccCCCCC-CCcccCCCcEecccCCCHHHHHHHHHHHHHHHHHHhc-Cc
Confidence 3689999999999999999999999 9999999943332 4566777788877776666677888888999998877 65
Q ss_pred ee-EEeeceeeeCCCC-hhhHHHHHHHHhhCCCCc-----ccc-----------CHHHHHHHcCCcccCCCCeEEEEecC
Q 015088 85 KV-YFKAHQFDMGPSE-NKSLRSVIASCRKNSVPH-----QVL-----------DCRQVLEKYSGRIEIPENWVGVATEL 146 (413)
Q Consensus 85 ~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~-----~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (413)
++ +...+.+...... ...+....+.+...+.+. +.+ +.+++.+ .. .+....+++.+.
T Consensus 100 ~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~g~~~~p~~~~~l~~~g~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~ 174 (448)
T 3axb_A 100 DLGLVKSGYLFVYDRERWREVEEPLREAGEEGRDYLIIPPEELERRLGMNTRVSDGEEAEV-LG----VGDVEGAVLIRS 174 (448)
T ss_dssp CCCCBCCCEEEEECHHHHHHHHHHHTTSCCBTTTEEEECHHHHHHHHCCCCCCTTSSHHHH-HT----CCCCCEEEEESS
T ss_pred ccccccCCEEEEcCHHHHHHHHHHHHHHHhhCCCccccchhhhhhcccccccCCCHHHHHh-cc----CCCceEEEEeCC
Confidence 44 3344444421111 112223333334456555 555 6666655 22 234556788888
Q ss_pred CceeChHHHHHHHHHHHHHCCCEEEcCceEEEEEEecc--------------cCCCeEEEEcCCCcEE--EcCEEEEcCC
Q 015088 147 GGVIKPTKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKD--------------AVKGGVTVVTSNGEKF--WGKKCVVTAG 210 (413)
Q Consensus 147 ~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~--------------~~~~~~~v~~~~g~~i--~ad~VV~A~G 210 (413)
+++++|..++..|.+.+++.|++++++++|++|.. + +++..+.|.+.+|+ + +||.||+|+|
T Consensus 175 ~~~~~~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~--~~~~~~~~~~~~~~~~~~~v~~V~t~~g~-i~~~Ad~VV~AtG 251 (448)
T 3axb_A 175 AGFLDAEKVVDYYYRRASGAGVEFIFGRRVVGVEL--KPRVELGIEGEPLPWQEARASAAVLSDGT-RVEVGEKLVVAAG 251 (448)
T ss_dssp EEECCHHHHHHHHHHHHHHTTCEEEESCCEEEEEE--EESSCCCCTTSSCTTSCEEEEEEEETTSC-EEEEEEEEEECCG
T ss_pred CeEEcHHHHHHHHHHHHHhCCCEEEcCCeEEEEEe--cccccccccccccccCCCceEEEEeCCCE-EeecCCEEEECCC
Confidence 89999999999999999999999999999999975 3 22344578888885 8 9999999999
Q ss_pred CChHHhhhhhcCCccceeEEEEEEEEEEecCCCCCc------cccCCCCCeEEEcCCCceEecCCCCCCCcEEEecCCCC
Q 015088 211 AWVGKLVKRITGLELPIQAVETTVCYWRIKEGNEAD------YAVGGDFPSFASYGDPYIYGTPSLEYPGLIKIALHGGY 284 (413)
Q Consensus 211 ~~s~~l~~~~~g~~~~~~~~~g~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~y~~p~~~~~~~~~~~~~~~~ 284 (413)
.|+..+++.+ +..+|+.+.+++++.++.+...... +.....+|.+... ..+|++|..+. |.+++|.....
T Consensus 252 ~~s~~l~~~~-g~~~~~~p~rg~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~~~y~~p~~~~-g~~~iG~~~~~ 327 (448)
T 3axb_A 252 VWSNRLLNPL-GIDTFSRPKKRMVFRVSASTEGLRRIMREGDLAGAGAPPLIILP--KRVLVRPAPRE-GSFWVQLSDNL 327 (448)
T ss_dssp GGHHHHHGGG-TCCCSEEEEEEEEEEEECCSHHHHHHHHHCCTTSSSSCCEEEET--TTEEEEEETTT-TEEEEEECCCT
T ss_pred cCHHHHHHHc-CCCCcccccceEEEEeCCcccccccccccccccccCCCceEEcC--CceEEeecCCC-CeEEEecCCcc
Confidence 9999898887 8889999999999988743210000 1111224665543 45899987642 43444443221
Q ss_pred CCCCCCCCC--C-Cchh-HHHHHHHHHhhcCCCCCCCCCeeeceeeeee-cCCCCeEecCCCCCCCCCEEEEeCCCCCCC
Q 015088 285 PCDPDRRPW--G-PGLL-LDSLKEWIQGRFAGRVDSNGPVATQLCMYSI-TPDEDFVIDFLGGEFGEDVVVAGGFSGHGF 359 (413)
Q Consensus 285 ~~~~~~~~~--~-~~~~-~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~-t~d~~p~ig~~~~~~~~~~~~~~G~~~~G~ 359 (413)
. +++..+. . ..+. .+.+.+.+.+++|.+.+. .+...|+|+|++ |+|+.|+||++| +|+|+++|++|+|+
T Consensus 328 ~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~P~l~~~-~~~~~w~G~r~~~t~d~~p~ig~~~----~~l~~a~G~~g~G~ 401 (448)
T 3axb_A 328 G-RPFALEEDPQPEEHYYSLAILPILSLYLPQFQDA-YPSGGWAGHYDISFDANPVVFEPWE----SGIVVAAGTSGSGI 401 (448)
T ss_dssp T-SCBCCCSSCCCCHHHHHHHTHHHHHHHCGGGTTC-CCSEEEEEEEEEETTSSCEEECGGG----CSEEEEECCTTCCG
T ss_pred c-CCcccccccCCChHHHHHHHHHHHHHhCcCcccC-CcccceEEEeccccCCCCcEeeecC----CCEEEEECCCchhH
Confidence 1 1111111 1 1225 788999999999998864 677899999999 999999999987 78999999999999
Q ss_pred ccchHHHHHHHHHHhcCCCC------cccccccc-ccc-cccCCC
Q 015088 360 KMAPAVGRILADLVLSGEAQ------GVELQHFR-ISR-FKENPK 396 (413)
Q Consensus 360 ~~a~~~a~~la~~i~~g~~~------~~~~~~~~-~~R-~~~~~~ 396 (413)
+++|++|+++|++|.++..+ ..+++.|+ |+| |...++
T Consensus 402 ~~ap~~g~~la~~i~~~~~~~~~~~~~~~~~~~~~~~R~f~~~~~ 446 (448)
T 3axb_A 402 MKSDSIGRVAAAVALGMESVELYGGVEMPVKWMGLEGRRYEQERL 446 (448)
T ss_dssp GGHHHHHHHHHHHHTTCSEEECTTSCEEEGGGGSSTTCCCCCCSC
T ss_pred hHhHHHHHHHHHHHcCCCcccccccceecHhHcCccccccccCCc
Confidence 99999999999999955542 16799999 999 987654
No 8
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=100.00 E-value=1.2e-40 Score=318.23 Aligned_cols=369 Identities=19% Similarity=0.244 Sum_probs=265.0
Q ss_pred CCCCCCcccEEEECCCHHHHHHHHHHHHcCC-cEEEEcccCCCCCCCcccCCCceeecccCCCChH------HHHHHHHH
Q 015088 1 MEFPGEKFDVIVVGAGIMGSSAAYQLAKRGQ-KTLLLEQFDFLHHRGSSHGESRTIRATYPEDYYH------PMVLESCL 73 (413)
Q Consensus 1 m~~~~~~~dvvIIGaG~aG~~~A~~L~~~g~-~V~liE~~~~~gg~~~s~~~~~~~~~~~~~~~~~------~l~~~~~~ 73 (413)
|. ++.++||+|||||++|+++|++|+++|+ +|+|||+....++.+++......+...+....+. .+...+..
T Consensus 1 M~-~~~~~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 79 (438)
T 3dje_A 1 MA-VTKSSSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYPVPSAISAGNDVNKVISSGQYSNNKDEIEVNEILAEEAFN 79 (438)
T ss_dssp -C-CCTTSCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSCSSCTTCTTCSSCEEECCCCSCCCHHHHHHHHHHHHHHHH
T ss_pred CC-CCCCCCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCCCCCCCccCCCCccEEEeccCCchhhhcchhHHHHHHHHH
Confidence 44 4457999999999999999999999999 9999999988766555545555566556666666 77778888
Q ss_pred HHHHHHHHhCCeeEEeeceeeeCCCChhhHHHHHHHHh-hCCCCc-cccCHHHHHHHcCC-cccCCCCeE--EEEecCC-
Q 015088 74 LWEQAQSEIGYKVYFKAHQFDMGPSENKSLRSVIASCR-KNSVPH-QVLDCRQVLEKYSG-RIEIPENWV--GVATELG- 147 (413)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~-~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~- 147 (413)
.|.++. .....+...+.+..... ...+..+..... ..+... +.++.+++.+.+|. ... ..... +++.+.+
T Consensus 80 ~~~~~~--~~~~~~~~~g~l~~~~~-~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~p~~l~~-~~~~g~~g~~~~~~~ 155 (438)
T 3dje_A 80 GWKNDP--LFKPYYHDTGLLMSACS-QEGLDRLGVRVRPGEDPNLVELTRPEQFRKLAPEGVLQ-GDFPGWKGYFARSGA 155 (438)
T ss_dssp HHHHCT--TTGGGEECCCEEEEECS-HHHHHHHHHHHCGGGCTTCEEECSHHHHHTTSCTTTSC-SCCTTCEEEEESSSC
T ss_pred HHhhCc--cccCcEeccceEEEecC-cchHHHHHHHHhhcccCCceecCCHHHHHHhCCccccc-CCCCCceEEEeCCCC
Confidence 777652 11122445555554432 222222222221 345555 67788888887773 111 22233 8888999
Q ss_pred ceeChHHHHHHHHHHHHHCCCEEEcCc---eEEEEEEecccCCCeEE-EEcCCCcEEEcCEEEEcCCCChHHhhhhhcCC
Q 015088 148 GVIKPTKAVSMFQTLAIKNGAVLRDNM---EVKTVLKVKDAVKGGVT-VVTSNGEKFWGKKCVVTAGAWVGKLVKRITGL 223 (413)
Q Consensus 148 ~~~~~~~~~~~l~~~~~~~Gv~i~~~~---~V~~i~~~~~~~~~~~~-v~~~~g~~i~ad~VV~A~G~~s~~l~~~~~g~ 223 (413)
+.+++..++..|.+.+++.|++|++++ +|++|.. + ++.+. |++.+|++++||.||+|+|+|+..+++ +
T Consensus 156 g~~~~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~--~--~~~v~gV~t~~G~~i~Ad~VV~AtG~~s~~l~~-l--- 227 (438)
T 3dje_A 156 GWAHARNALVAAAREAQRMGVKFVTGTPQGRVVTLIF--E--NNDVKGAVTADGKIWRAERTFLCAGASAGQFLD-F--- 227 (438)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEE--E--TTEEEEEEETTTEEEECSEEEECCGGGGGGTSC-C---
T ss_pred EEecHHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEe--c--CCeEEEEEECCCCEEECCEEEECCCCChhhhcC-c---
Confidence 999999999999999999999999999 9999988 6 34555 999999779999999999999988876 3
Q ss_pred ccceeEEEEEEEEEEecCCCCCccccCCCCCeEEEcCCCceEecCCCCCCCcEEEecC-CCCCC-----------CCCCC
Q 015088 224 ELPIQAVETTVCYWRIKEGNEADYAVGGDFPSFASYGDPYIYGTPSLEYPGLIKIALH-GGYPC-----------DPDRR 291 (413)
Q Consensus 224 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~p~~~~~~~~~~~~~-~~~~~-----------~~~~~ 291 (413)
..++.+.+.++.++.+++.....+ ..+|++.... ..+|+.|..+ ++.++++.+ .+... .|...
T Consensus 228 ~~~~~p~~~~~~~~~l~~~~~~~~---~~~p~~~~~~-~~~~~~p~~~-~~~l~i~~~~~g~~~~~~~~~~~~~~~p~~~ 302 (438)
T 3dje_A 228 KNQLRPTAWTLVHIALKPEERALY---KNIPVIFNIE-RGFFFEPDEE-RGEIKICDEHPGYTNMVQSADGTMMSIPFEK 302 (438)
T ss_dssp TTCCEEEEEEEEEEECCGGGHHHH---TTCCEEEETT-TEEECSCCTT-TCEEEEEECCSCEECEEECTTCCEEECCCCC
T ss_pred ccceeeEEEEEEEEEcChHHhhhh---cCCCEEEECC-CceecCCCCC-CCeEEEEeCCCCccCCccCCCcccccCCccc
Confidence 335677777776666544221112 2367665443 4578777644 355555432 12211 01111
Q ss_pred CCCCchhHHHHHHHHHhhcCCCCCCCCCeeeceeeeeecCCCCeEecCCCCCCCCCEEEEeCCCCCCCccchHHHHHHHH
Q 015088 292 PWGPGLLLDSLKEWIQGRFAGRVDSNGPVATQLCMYSITPDEDFVIDFLGGEFGEDVVVAGGFSGHGFKMAPAVGRILAD 371 (413)
Q Consensus 292 ~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~t~d~~p~ig~~~~~~~~~~~~~~G~~~~G~~~a~~~a~~la~ 371 (413)
...+.+..+.+.+.+.++||.+.+. ++...|+|+|++|||+.|+||++|.. +|+|+++|++|+|++++|++|+++|+
T Consensus 303 ~~~~~~~~~~l~~~~~~~~P~l~~~-~~~~~~~g~~~~t~D~~piig~~p~~--~~l~~a~G~~g~G~~~ap~~g~~la~ 379 (438)
T 3dje_A 303 TQIPKEAETRVRALLKETMPQLADR-PFSFARICWCADTANREFLIDRHPQY--HSLVLGCGASGRGFKYLPSIGNLIVD 379 (438)
T ss_dssp SSCBHHHHHHHHHHHHHHCGGGTTC-CCSEEEEEEEEECTTSCCEEEECSSC--TTEEEEECCTTCCGGGTTTHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHhCcccccC-CcceeeEEEeCcCCCCCeEEeecCCC--CCEEEEECCCCcchhhhHHHHHHHHH
Confidence 1223336788999999999999875 67889999999999999999999987 99999999999999999999999999
Q ss_pred HHhcCCCCcccccccccccc
Q 015088 372 LVLSGEAQGVELQHFRISRF 391 (413)
Q Consensus 372 ~i~~g~~~~~~~~~~~~~R~ 391 (413)
+|. |+.++...+.|+++|.
T Consensus 380 ~i~-g~~~~~~~~~~~~~~~ 398 (438)
T 3dje_A 380 AME-GKVPQKIHELIKWNPD 398 (438)
T ss_dssp HHH-TCCCHHHHHHHSCCHH
T ss_pred HHh-CCCChhhccccCCCCc
Confidence 998 5554567788888775
No 9
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=100.00 E-value=1.4e-40 Score=333.18 Aligned_cols=365 Identities=15% Similarity=0.128 Sum_probs=265.0
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCcccCCCceeecccCCCC--hHHHHHHHHHHHHHHHHHhCC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESRTIRATYPEDY--YHPMVLESCLLWEQAQSEIGY 84 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~gg~~~s~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~ 84 (413)
.+||+|||||++|+++|++|+++|++|+|||++...+ .++|....+.+........ ...+...+.....++.+..+.
T Consensus 272 ~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~g-~gaS~~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 350 (676)
T 3ps9_A 272 KREAAIIGGGIASALLSLALLRRGWQVTLYCADEAPA-LGASGNRQGALYPLLSKHDEALNRFFSNAFTFARRFYDQLPV 350 (676)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSS-CSTTCCSCEEECCCCCSSCHHHHHHHHHHHHHHHHHHHHCCS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCccc-ccCccCCCceecCcCCCCccHHHHHHHHHHHHHHHHHHHCCC
Confidence 4899999999999999999999999999999976654 3455555666665443322 333333334444445555555
Q ss_pred ee-EEeeceeeeCCCChhhHHHHHHHHhhCCCCcc---ccCHHHHHHHcCCcccCCCCeEEEEecCCceeChHHHHHHHH
Q 015088 85 KV-YFKAHQFDMGPSENKSLRSVIASCRKNSVPHQ---VLDCRQVLEKYSGRIEIPENWVGVATELGGVIKPTKAVSMFQ 160 (413)
Q Consensus 85 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 160 (413)
.+ +...+.+.... ...... ....+...+++.+ .++.+++.+..+. +....+++.+.++.++|..++..|.
T Consensus 351 ~~~~~~~g~l~~~~-~~~~~~-~~~~~~~~g~~~~~~~~l~~~~~~~~~~l----~~~~gg~~~p~~g~v~p~~l~~aL~ 424 (676)
T 3ps9_A 351 KFDHDWCGVTQLGW-DEKSQH-KIAQMLSMDLPAELAVAVEANAVEQITGV----ATNCSGITYPQGGWLCPAELTRNVL 424 (676)
T ss_dssp CCCEECCCEEEECC-SHHHHH-HHHHHHTSCCCTTTCEEECHHHHHHHHSS----CCSSCEEEETTCEEECHHHHHHHHH
T ss_pred CcCcCcCCeeeecC-CHHHHH-HHHHHHhcCCcHHHhhhCCHHHHHHhhCC----CccCCcEEecCCeeeCHHHHHHHHH
Confidence 44 23345444433 222222 2233445666655 8888888887663 4556788999999999999999999
Q ss_pred HHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCChHHhhhhhcCCccceeEEEEEEEEEEec
Q 015088 161 TLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWVGKLVKRITGLELPIQAVETTVCYWRIK 240 (413)
Q Consensus 161 ~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s~~l~~~~~g~~~~~~~~~g~~~~~~~~ 240 (413)
+.+++.|++|+++++|++|.. + ++.|.|++.+|.+++||.||+|+|.|+..+.... .+|+.+.+|+++.+..+
T Consensus 425 ~~a~~~Gv~i~~~t~V~~l~~--~--~~~v~V~t~~G~~i~Ad~VVlAtG~~s~~l~~~~---~lpl~p~rGq~~~~~~~ 497 (676)
T 3ps9_A 425 ELAQQQGLQIYYQYQLQNFSR--K--DDCWLLNFAGDQQATHSVVVLANGHQISRFSQTS---TLPVYSVAGQVSHIPTT 497 (676)
T ss_dssp HHHHHTTCEEEESCCEEEEEE--E--TTEEEEEETTSCEEEESEEEECCGGGGGCSTTTT---TCSCEEEEEEEEEEECC
T ss_pred HHHHhCCCEEEeCCeeeEEEE--e--CCeEEEEECCCCEEECCEEEECCCcchhcccccc---CCcceeecCEEEEECCC
Confidence 999999999999999999998 6 4568899888777999999999999998777654 46899999999988743
Q ss_pred CCCCCccccCCCCCeEEEcCCCceEecCCCCCCCcEEEec-CCCCCCCCCCCCCCCchhHHHHHHHHHhhcCCCC---CC
Q 015088 241 EGNEADYAVGGDFPSFASYGDPYIYGTPSLEYPGLIKIAL-HGGYPCDPDRRPWGPGLLLDSLKEWIQGRFAGRV---DS 316 (413)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~y~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~---~~ 316 (413)
+. .. .++.....+ .|++|....++.+.+|. ......++ ... .+..+.+++.+.+++|.+. +.
T Consensus 498 ~~----~~---~l~~~l~~~---~Yl~P~~~~~g~~~iG~t~~~~~~d~---~~~-~~~~~~~l~~l~~~~P~l~~~~~~ 563 (676)
T 3ps9_A 498 PE----LA---ELKQVLCYD---GYLTPQNPANQHHCIGASYHRGSEDT---AYS-EDDQQQNRQRLIDCFPQAQWAKEV 563 (676)
T ss_dssp TT----GG---GCCSEEESS---SEECCCBTTTTEEEEECCCEETCCCC---CCC-HHHHHHHHHHHHHHSTTCHHHHTC
T ss_pred cc----cc---cCCceeECC---eeeccccCCCCeEEEeeccCCCCCCC---CCC-HHHHHHHHHHHHHhCCCccccccC
Confidence 32 11 133344433 69999862235454443 22111111 111 2256788889999999865 11
Q ss_pred -CCCeeeceeeeeecCCCCeEecCCCC-----------------------CCCCCEEEEeCCCCCCCccchHHHHHHHHH
Q 015088 317 -NGPVATQLCMYSITPDEDFVIDFLGG-----------------------EFGEDVVVAGGFSGHGFKMAPAVGRILADL 372 (413)
Q Consensus 317 -~~~~~~~~g~~~~t~d~~p~ig~~~~-----------------------~~~~~~~~~~G~~~~G~~~a~~~a~~la~~ 372 (413)
..+...|+|+|++|+|++|+||++|+ . +|+|+++|+||+|+++||++|++||++
T Consensus 564 d~~~~~~~~G~R~~t~D~lPiiG~~p~~~~~~~~y~~l~~~~~~~~~~~~~--~~l~~a~G~g~~Gl~~Ap~~ae~lA~~ 641 (676)
T 3ps9_A 564 DVSDKEARCGVRCATRDHLPMVGNVPDYEATLVEYASLAEQKDEAVSAPVF--DDLFMFAALGSRGLCSAPLCAEILAAQ 641 (676)
T ss_dssp CCTTCCEEEEEEEECTTCCCEEEEEECHHHHHHHTTTTTSCCTTCCSCCEE--EEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cccccceEEEEeCccCCcCCccCcCCChHHHHHHHHhhhccccccccCCCC--CCEeeeecccccHHHHHHHHHHHHHHH
Confidence 24678999999999999999999875 4 799999999999999999999999999
Q ss_pred HhcCCCCccc---cccccccccccCCCCCCccc
Q 015088 373 VLSGEAQGVE---LQHFRISRFKENPKGNVKDY 402 (413)
Q Consensus 373 i~~g~~~~~~---~~~~~~~R~~~~~~~~~~~~ 402 (413)
|. |++.+.+ ++.|+|+||...++.++++.
T Consensus 642 i~-g~~~pl~~~~l~~~~p~Rf~~r~l~~~~~~ 673 (676)
T 3ps9_A 642 MS-DEPIPMDASTLAALNPNRLWVRKLLKGKAV 673 (676)
T ss_dssp HT-TCCCSSBHHHHHTTCTTHHHHHHHHTTC--
T ss_pred Hc-CCCCCCCHHHHhhhChHHhHHHHHhccCCC
Confidence 98 7765666 79999999998877766654
No 10
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=100.00 E-value=1.7e-40 Score=332.92 Aligned_cols=364 Identities=16% Similarity=0.133 Sum_probs=264.9
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCcccCCCceeecccCCC--ChHHH----HHHHHHHHHHHHH
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESRTIRATYPED--YYHPM----VLESCLLWEQAQS 80 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~gg~~~s~~~~~~~~~~~~~~--~~~~l----~~~~~~~~~~~~~ 80 (413)
.+||+|||||++|+++|++|+++|++|+|||++...+ .+++....+.+....... ....+ ...+...|.++..
T Consensus 264 ~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~g-~gaS~~~~G~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~l~~ 342 (689)
T 3pvc_A 264 CDDIAIIGGGIVSALTALALQRRGAVVTLYCADAQPA-QGASGNRQGALYPLLNGKNDALETFFTSAFTFARRQYDQLLE 342 (689)
T ss_dssp CSSEEEECCSHHHHHHHHHHHTTTCCEEEEESSSSTT-CSGGGCSCEEECCCCCSSCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCcEEEEeCCCccc-cccccccCCEEecCCCCCChHHHHHHHHHHHHHHHHHHHhhh
Confidence 4899999999999999999999999999999987654 345556666666544322 12232 2335566666622
Q ss_pred HhCCee-EEeeceeeeCCCChhhHHHHHHHHhhCCCCcc---ccCHHHHHHHcCCcccCCCCeEEEEecCCceeChHHHH
Q 015088 81 EIGYKV-YFKAHQFDMGPSENKSLRSVIASCRKNSVPHQ---VLDCRQVLEKYSGRIEIPENWVGVATELGGVIKPTKAV 156 (413)
Q Consensus 81 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (413)
.+..+ +...+.+.+... ..... ....+...+++.+ .++.+++.+..+. +....+++.+.++.++|..++
T Consensus 343 -~~~~~~~~~~g~l~~~~~-~~~~~-~~~~~~~~g~~~~~~~~l~~~~~~~~~~l----~~~~gg~~~p~~g~v~p~~l~ 415 (689)
T 3pvc_A 343 -QGIAFDHQWCGVSQLAFD-DKSRG-KIEKMLHTQWPVEFAEAMSREQLSELAGL----DCAHDGIHYPAGGWLCPSDLT 415 (689)
T ss_dssp -TTCCCCEECCCEEEECCS-HHHHH-HHHHHTTSCCCTTTCEEECHHHHHHHHSS----CCSSCEEEETTCEEECHHHHH
T ss_pred -hccccccccCceEEeccC-HHHHH-HHHHHHhcCCChHHhhccCHHHHHHhcCC----CcccceEEecCCeEECHHHHH
Confidence 23333 334455554432 22222 2233445566655 8888888887763 456678899999999999999
Q ss_pred HHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcCCCc-EEEcCEEEEcCCCChHHhhhhhcCCccceeEEEEEEE
Q 015088 157 SMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGE-KFWGKKCVVTAGAWVGKLVKRITGLELPIQAVETTVC 235 (413)
Q Consensus 157 ~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~-~i~ad~VV~A~G~~s~~l~~~~~g~~~~~~~~~g~~~ 235 (413)
..|.+.+++.|++|+++++|++|.. + ++.|.|++.+|. +++||.||+|+|.|+..+...+ .+|+.+.+|+++
T Consensus 416 ~aL~~~a~~~Gv~i~~~t~V~~l~~--~--~~~v~V~t~~G~~~i~Ad~VVlAtG~~s~~l~~~~---~lpl~p~rGq~~ 488 (689)
T 3pvc_A 416 HALMMLAQQNGMTCHYQHELQRLKR--I--DSQWQLTFGQSQAAKHHATVILATGHRLPEWEQTH---HLPLSAVRGQVS 488 (689)
T ss_dssp HHHHHHHHHTTCEEEESCCEEEEEE--C--SSSEEEEEC-CCCCEEESEEEECCGGGTTCSTTTT---TSCCEEEEEEEE
T ss_pred HHHHHHHHhCCCEEEeCCeEeEEEE--e--CCeEEEEeCCCcEEEECCEEEECCCcchhcccccc---CCccccccCcEE
Confidence 9999999999999999999999998 7 345889998886 6999999999999998777654 468999999999
Q ss_pred EEEecCCCCCccccCCCCCeEEEcCCCceEecCCCCCCCcEEEecC-CCCCCCCCCCCCCCchhHHHHHHHHHhhcCCCC
Q 015088 236 YWRIKEGNEADYAVGGDFPSFASYGDPYIYGTPSLEYPGLIKIALH-GGYPCDPDRRPWGPGLLLDSLKEWIQGRFAGRV 314 (413)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~ 314 (413)
.+..++. .. .++.+...+ .|++|....+|.+.+|.. .....+++ .. .+..+.+++.+.+++|.+.
T Consensus 489 ~~~~~~~----~~---~l~~v~~~~---~Yl~P~~~~~g~~~iGat~~~~~~d~~---~~-~~~~~~ll~~l~~~~P~l~ 554 (689)
T 3pvc_A 489 HIPTTPV----LS---QLQQVLCYD---GYLTPVNPANQHHCIGASYQRGDIATD---FR-LTEQQENRERLLRCLPQVS 554 (689)
T ss_dssp EEECCTT----GG---GCCSEEESS---SEECCCBTTTTEEEEECCCEETBCCCC---CC-HHHHHHHHHHHHHHCTTCS
T ss_pred EECCCCc----cc---cCCeeEeCC---ceEccccCCCCeEEEEEeccCCCCCCC---CC-HHHHHHHHHHHHHhCCCcc
Confidence 8874432 11 134444433 699998622355555432 21111211 11 2256788899999999876
Q ss_pred -----CCCCCeeeceeeeeecCCCCeEecCCCC-------------------------------CCCCCEEEEeCCCCCC
Q 015088 315 -----DSNGPVATQLCMYSITPDEDFVIDFLGG-------------------------------EFGEDVVVAGGFSGHG 358 (413)
Q Consensus 315 -----~~~~~~~~~~g~~~~t~d~~p~ig~~~~-------------------------------~~~~~~~~~~G~~~~G 358 (413)
+. .+...|+|+|++|+|+.|+||++|+ . +|+|+++|+||+|
T Consensus 555 ~~~~~~~-~~~~~w~G~R~~t~D~lPiiG~~p~~~~~~~~y~~l~~~~~~~~~~~~~~~~~~~~~--~~l~~a~G~g~~G 631 (689)
T 3pvc_A 555 WPQQVDV-SDNQARCGVRCAIRDHLPMVGAVPDYAATLAQYQDLSRRIQHGGESEVNDIAVAPVW--PELFMVGGLGSRG 631 (689)
T ss_dssp GGGGCCC-TTCCEEEEEEEECTTSCCEEEEEECHHHHHHHSTTHHHHC--------CCCCCCCEE--EEEEEEECCTTCH
T ss_pred ccccccc-cccceeEEEeeecCCCCcccCcCCCHHHHHHHHHhhhccccccccccccccccCCCC--CChHHhhcccccH
Confidence 22 4678999999999999999999875 4 7999999999999
Q ss_pred CccchHHHHHHHHHHhcCCCCccc---cccccccccccCCCCCCcccc
Q 015088 359 FKMAPAVGRILADLVLSGEAQGVE---LQHFRISRFKENPKGNVKDYE 403 (413)
Q Consensus 359 ~~~a~~~a~~la~~i~~g~~~~~~---~~~~~~~R~~~~~~~~~~~~~ 403 (413)
+++||++|++||++|+ |++.+.+ ++.|+|+||...++.++|+..
T Consensus 632 l~~ap~~ae~lA~~i~-g~~~p~~~~~l~~~~p~Rf~~r~l~~~~~~~ 678 (689)
T 3pvc_A 632 LCSAPLVAEILAAQMF-GEPLPLDAKTLAALNPNRFWIRKLLKGRPVQ 678 (689)
T ss_dssp HHHHHHHHHHHHHHHT-TCCCSSCHHHHHTTCTTHHHHHHHTTC----
T ss_pred HHHHHHHHHHHHHHHc-CCCCCCCHHHHhhcChhHHHHHHHhcCCccc
Confidence 9999999999999998 7766666 899999999998888777763
No 11
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=100.00 E-value=8.3e-41 Score=313.83 Aligned_cols=356 Identities=19% Similarity=0.224 Sum_probs=262.1
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCcccCCCceeecccC---CCChHHHHHHHHHHHHHHHHH
Q 015088 5 GEKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESRTIRATYP---EDYYHPMVLESCLLWEQAQSE 81 (413)
Q Consensus 5 ~~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~gg~~~s~~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~~~~ 81 (413)
+.++||+|||||++|+++|++|+++|++|+|||+....+ ++|..+.+.+..... ...+..+...+.+.|.++.+.
T Consensus 15 ~~~~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~~~~--g~s~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 92 (382)
T 1ryi_A 15 KRHYEAVVIGGGIIGSAIAYYLAKENKNTALFESGTMGG--RTTSAAAGMLGAHAECEERDAFFDFAMHSQRLYKGLGEE 92 (382)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTT--THHHHCCCBCCGGGSCSSCSHHHHHHHHHHHHTTTHHHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCc--ccchhcCceeccCccCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 356999999999999999999999999999999987653 455555666655443 234567777777777665544
Q ss_pred h----CCee-EEeeceeeeCCCChhhHHHHHHHHhhCCCCccccCHHHHHHHcCCcccCCCCeEEEEecCCceeChHHHH
Q 015088 82 I----GYKV-YFKAHQFDMGPSENKSLRSVIASCRKNSVPHQVLDCRQVLEKYSGRIEIPENWVGVATELGGVIKPTKAV 156 (413)
Q Consensus 82 ~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (413)
. +..+ +...+.+.+... ......+..... . ...+.++.+++.+.+|. +. .....+++.+.++.++|..+.
T Consensus 93 ~~~~~~~~~~~~~~g~l~~~~~-~~~~~~~~~~~~-~-~~~~~l~~~~~~~~~p~-~~-~~~~~~~~~~~~~~~~~~~~~ 167 (382)
T 1ryi_A 93 LYALSGVDIRQHNGGMFKLAFS-EEDVLQLRQMDD-L-DSVSWYSKEEVLEKEPY-AS-GDIFGASFIQDDVHVEPYFVC 167 (382)
T ss_dssp HHHHHCCCCCCBCCCEEEEESS-HHHHHHHHTTTT-S-TTEEEEEHHHHHHHCTT-SC-TTCCEEEEETTCCBCCHHHHH
T ss_pred HHHhhCCCcCeeecceEEEEeC-HHHHHHHHHHhh-c-CCeEEECHHHHHHhCCC-CC-cccceEEEeCCCeEEcHHHHH
Confidence 3 5554 334455544332 222222222211 1 45678888888888886 43 344567888889999999999
Q ss_pred HHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCChHHhhhhhcCCccceeEEEEEEEE
Q 015088 157 SMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWVGKLVKRITGLELPIQAVETTVCY 236 (413)
Q Consensus 157 ~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s~~l~~~~~g~~~~~~~~~g~~~~ 236 (413)
+.|.+.+++.|++++++++|++|.. + ++.+.|.+.+| +++||.||+|+|.|+..+.+.+ +..+++.+.+++++.
T Consensus 168 ~~l~~~~~~~g~~i~~~~~v~~i~~--~--~~~~~v~~~~g-~~~a~~vV~A~G~~s~~l~~~~-~~~~~~~~~~g~~~~ 241 (382)
T 1ryi_A 168 KAYVKAAKMLGAEIFEHTPVLHVER--D--GEALFIKTPSG-DVWANHVVVASGVWSGMFFKQL-GLNNAFLPVKGECLS 241 (382)
T ss_dssp HHHHHHHHHTTCEEETTCCCCEEEC--S--SSSEEEEETTE-EEEEEEEEECCGGGTHHHHHHT-TCCCCCEEEEEEEEE
T ss_pred HHHHHHHHHCCCEEEcCCcEEEEEE--E--CCEEEEEcCCc-eEEcCEEEECCChhHHHHHHhc-CCCCceeccceEEEE
Confidence 9999999999999999999999987 6 34567888777 5999999999999998888876 888899999999988
Q ss_pred EEecCCCCCccccCCCCCeEEEcCCCceEecCCCCCCCcEEEecCCCC-CCCCCCCCCCCchhHHHHHHHHHhhcCCCCC
Q 015088 237 WRIKEGNEADYAVGGDFPSFASYGDPYIYGTPSLEYPGLIKIALHGGY-PCDPDRRPWGPGLLLDSLKEWIQGRFAGRVD 315 (413)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~ 315 (413)
++.+... + ... +.. ...|++|..+ +.+.+|..... ..++. ...+..+.+.+.+.+++|.+.+
T Consensus 242 ~~~~~~~---~----~~~-~~~---~~~~~~p~~~--g~~~vG~~~~~~~~~~~----~~~~~~~~l~~~~~~~~p~l~~ 304 (382)
T 1ryi_A 242 VWNDDIP---L----TKT-LYH---DHCYIVPRKS--GRLVVGATMKPGDWSET----PDLGGLESVMKKAKTMLPAIQN 304 (382)
T ss_dssp EECCSSC---C----CSE-EEE---TTEEEEECTT--SEEEEECCCEETCCCCS----CCHHHHHHHHHHHHHHCGGGGG
T ss_pred ECCCCCC---c----cce-EEc---CCEEEEEcCC--CeEEEeecccccCCCCC----CCHHHHHHHHHHHHHhCCCcCC
Confidence 8743211 1 111 222 2478888754 44555542211 11111 1123678899999999998875
Q ss_pred CCCCeeeceeeeeecCCCCeEecCCCCCCCCCEEEEeCCCCCCCccchHHHHHHHHHHhcCCCCcccc-ccccccccccC
Q 015088 316 SNGPVATQLCMYSITPDEDFVIDFLGGEFGEDVVVAGGFSGHGFKMAPAVGRILADLVLSGEAQGVEL-QHFRISRFKEN 394 (413)
Q Consensus 316 ~~~~~~~~~g~~~~t~d~~p~ig~~~~~~~~~~~~~~G~~~~G~~~a~~~a~~la~~i~~g~~~~~~~-~~~~~~R~~~~ 394 (413)
. .+...|+|+|++|+|+.|+||++|.. +|+|+++|++|+|+++||.+|+++|++|.++.. +.++ +.|+|+||...
T Consensus 305 ~-~~~~~w~g~~~~t~d~~p~ig~~~~~--~~l~~~~G~~g~G~~~a~~~g~~la~~i~~~~~-~~~~~~~~~~~Rf~~~ 380 (382)
T 1ryi_A 305 M-KVDRFWAGLRPGTKDGKPYIGRHPED--SRILFAAGHFRNGILLAPATGALISDLIMNKEV-NQDWLHAFRIDRKEAV 380 (382)
T ss_dssp S-EEEEEEEEEEEECSSSCCEEEEETTE--EEEEEEECCSSCTTTTHHHHHHHHHHHHTTCCC-CHHHHHHTCSCCC---
T ss_pred C-ceeeEEEEecccCCCCCcEeccCCCc--CCEEEEEcCCcchHHHhHHHHHHHHHHHhCCCC-CchhhcCCChhhcccC
Confidence 4 56789999999999999999999876 899999999999999999999999999985544 5677 99999999754
No 12
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=100.00 E-value=3.2e-38 Score=322.91 Aligned_cols=372 Identities=17% Similarity=0.189 Sum_probs=274.5
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCC-cEEEEcccCCCCCCCcccCCCceeecccCCCChHHHHHHHHHHHHHHHHHhCC
Q 015088 6 EKFDVIVVGAGIMGSSAAYQLAKRGQ-KTLLLEQFDFLHHRGSSHGESRTIRATYPEDYYHPMVLESCLLWEQAQSEIGY 84 (413)
Q Consensus 6 ~~~dvvIIGaG~aG~~~A~~L~~~g~-~V~liE~~~~~gg~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 84 (413)
.++||+|||||++|+++|++|+++|+ +|+|||++...+..+++..+.+.+...........+...+.+.|.++.. .+.
T Consensus 3 ~~~dVvIIGgGi~Gls~A~~La~~G~~~V~vlE~~~~~~~~gss~~~~G~~~~~~~~~~~~~l~~~s~~~~~~l~~-~~~ 81 (830)
T 1pj5_A 3 STPRIVIIGAGIVGTNLADELVTRGWNNITVLDQGPLNMPGGSTSHAPGLVFQTNPSKTMASFAKYTVEKLLSLTE-DGV 81 (830)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSCTTCCCSGGGTCCCEECCCCSCHHHHHHHHHHHHHHHHCEE-TTE
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEeCCCCCCCcccceeCCceeecCCCCHHHHHHHHHHHHHHHHHHh-hCC
Confidence 36899999999999999999999998 9999999886533345555556665544444556677777888887742 333
Q ss_pred eeEEeeceeeeCCCC--hhhHHHHHHHHhhCCCCccccCHHHHHHHcCCcccCCCCeEEEEecCCceeChHHHHHHHHHH
Q 015088 85 KVYFKAHQFDMGPSE--NKSLRSVIASCRKNSVPHQVLDCRQVLEKYSGRIEIPENWVGVATELGGVIKPTKAVSMFQTL 162 (413)
Q Consensus 85 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 162 (413)
..+...+.+.+.... ...+....+.....|++.+.++.+++.+.+|. +.......+++.+.++.++|..++..|.+.
T Consensus 82 ~~~~~~G~l~~~~~~~~~~~l~~~~~~~~~~G~~~~~l~~~e~~~~~p~-l~~~~~~gg~~~~~~g~v~p~~l~~~L~~~ 160 (830)
T 1pj5_A 82 SCFNQVGGLEVATTETRLADLKRKLGYAAAWGIEGRLLSPAECQELYPL-LDGENILGGLHVPSDGLASAARAVQLLIKR 160 (830)
T ss_dssp ESEECCCEEEEESSHHHHHHHHHHHHHHHHHTCCCEEECHHHHHHHCTT-SCGGGCCEEEEETTCEEECHHHHHHHHHHH
T ss_pred CCeeecCcEEEEeCHHHHHHHHHHHHHHHHcCCCeEEECHHHHHHhCcc-CCccceEEEEEECCCceEcHHHHHHHHHHH
Confidence 445566666654432 22344555566778888999999999999887 543445678899999999999999999999
Q ss_pred HHHCCCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCChHHhhhhhcCCccceeEEEEEEEEEEecCC
Q 015088 163 AIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWVGKLVKRITGLELPIQAVETTVCYWRIKEG 242 (413)
Q Consensus 163 ~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s~~l~~~~~g~~~~~~~~~g~~~~~~~~~~ 242 (413)
+++.|++|+++++|++|.. ++ +..+.|.+.+|+ ++||.||+|+|.|+..+.+.+ +..+|+.|.+++++.+...+.
T Consensus 161 a~~~Gv~i~~~t~V~~i~~--~~-~~v~~V~t~~G~-i~Ad~VV~AaG~~s~~l~~~~-g~~~pl~p~~g~~~~~~~~~~ 235 (830)
T 1pj5_A 161 TESAGVTYRGSTTVTGIEQ--SG-GRVTGVQTADGV-IPADIVVSCAGFWGAKIGAMI-GMAVPLLPLAHQYVKTTPVPA 235 (830)
T ss_dssp HHHTTCEEECSCCEEEEEE--ET-TEEEEEEETTEE-EECSEEEECCGGGHHHHHHTT-TCCCCCEEEEEEEEEESCCGG
T ss_pred HHHcCCEEECCceEEEEEE--eC-CEEEEEEECCcE-EECCEEEECCccchHHHHHHh-CCCccceeceeEEEEEecCcc
Confidence 9999999999999999987 62 234568888884 999999999999998887766 888999999999987753221
Q ss_pred CCC-cc-ccCCCCCeEEEcCCCceEecCCCCCCCcEEEecCCCC-CCCCC-----------------CCCCCCchhHHHH
Q 015088 243 NEA-DY-AVGGDFPSFASYGDPYIYGTPSLEYPGLIKIALHGGY-PCDPD-----------------RRPWGPGLLLDSL 302 (413)
Q Consensus 243 ~~~-~~-~~~~~~~~~~~~~~~~~y~~p~~~~~~~~~~~~~~~~-~~~~~-----------------~~~~~~~~~~~~l 302 (413)
... .. .....+|++...+ ..+|++|..+ +++.+++.... ..+|+ ..... .+..+.+
T Consensus 236 ~~~~~~~~~~~~~pv~~~~~-~~~y~r~~~~--~l~iG~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~-~~~~~~l 311 (830)
T 1pj5_A 236 QQGRNDQPNGARLPILRHQD-QDLYYREHGD--RYGIGSYAHRPMPVDVDTLGAYAPETVSEHHMPSRLDFT-LEDFLPA 311 (830)
T ss_dssp GTTTSCTTTCCCSCEEEEGG-GTEEEEEETT--EEEEEECCSCCCBCCGGGSCCCCGGGCBTTBSTTEECCC-HHHHHHH
T ss_pred cccccccccCCCCCeEEcCC-CCEEEEEeCC--eEEEeccCCCCcccCcccccccccccccccccccccCCC-HHHHHHH
Confidence 100 00 0012356554332 3478888653 44344332110 01110 00111 2256788
Q ss_pred HHHHHhhcCCCCCCCCCeeeceeeeeecCCCCeEecCCCCCCCCCEEEEeCCCCCCCccchHHHHHHHHHHhcCCCCccc
Q 015088 303 KEWIQGRFAGRVDSNGPVATQLCMYSITPDEDFVIDFLGGEFGEDVVVAGGFSGHGFKMAPAVGRILADLVLSGEAQGVE 382 (413)
Q Consensus 303 ~~~~~~~~p~~~~~~~~~~~~~g~~~~t~d~~p~ig~~~~~~~~~~~~~~G~~~~G~~~a~~~a~~la~~i~~g~~~~~~ 382 (413)
.+.+.+++|.+.+. .+...|+|+|++|+|+.|+||++|+. +|+|+++|+ |+++||++|+++|++|.++.+ +.+
T Consensus 312 ~~~~~~~~P~l~~~-~i~~~w~G~r~~t~D~~PiIG~~p~~--~gl~va~G~---G~~~ap~~g~~la~li~~~~~-~~d 384 (830)
T 1pj5_A 312 WEATKQLLPALADS-EIEDGFNGIFSFTPDGGPLLGESKEL--DGFYVAEAV---WVTHSAGVAKAMAELLTTGRS-ETD 384 (830)
T ss_dssp HHHHHHHCGGGGGS-CEEEEEEEEEEECTTSCCEEEECSSS--BTEEEEESC---CGGGHHHHHHHHHHHHHHSSC-SSC
T ss_pred HHHHHHhCcccccc-CcceEEEeecccCCCCCeeeccCCCC--CCEEEEECc---hHHhhHHHHHHHHHHHhCCCC-Ccc
Confidence 99999999998864 67789999999999999999999987 999999986 799999999999999996665 567
Q ss_pred cccccccccccCC
Q 015088 383 LQHFRISRFKENP 395 (413)
Q Consensus 383 ~~~~~~~R~~~~~ 395 (413)
+..|+|+||...+
T Consensus 385 l~~~~~~Rf~~~~ 397 (830)
T 1pj5_A 385 LGECDITRFEDVQ 397 (830)
T ss_dssp CTTTBGGGCCGGG
T ss_pred ccccChhhhcccc
Confidence 8999999998643
No 13
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=100.00 E-value=1.5e-37 Score=290.21 Aligned_cols=345 Identities=17% Similarity=0.146 Sum_probs=251.9
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCcccCCCceeecccC---CCChHHHHHHHHHHHHHHHHHh
Q 015088 6 EKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESRTIRATYP---EDYYHPMVLESCLLWEQAQSEI 82 (413)
Q Consensus 6 ~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~gg~~~s~~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~ 82 (413)
.++||+|||||++|+++|++|+++|++|+|||++...+ .+++..+.+.++.... ......+...+...|.++....
T Consensus 3 ~~~dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~~~~~-~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (369)
T 3dme_A 3 TDIDCIVIGAGVVGLAIARALAAGGHEVLVAEAAEGIG-TGTSSRNSEVIHAGIYYPADSLKARLCVRGKHLLYEYCAAR 81 (369)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSS-CSTTSSSCCEECCCCSSCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCC-CccCcCCccccccCccCCCCCHhHHHHHHHHHHHHHHHHHc
Confidence 36899999999999999999999999999999986543 3455556666654332 2224567777888888888887
Q ss_pred CCeeEEeeceeeeCCCC--hhhHHHHHHHHhhCCCC-ccccCHHHHHHHcCCcccCCCCeEEEEecCCceeChHHHHHHH
Q 015088 83 GYKVYFKAHQFDMGPSE--NKSLRSVIASCRKNSVP-HQVLDCRQVLEKYSGRIEIPENWVGVATELGGVIKPTKAVSMF 159 (413)
Q Consensus 83 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 159 (413)
+.. +...+.+.+.... ...+....+.....+++ .+.++.+++.+.+|. + ....+.+.+..+.+++..+.+.|
T Consensus 82 ~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~-~---~~~~~~~~~~~~~~~~~~~~~~l 156 (369)
T 3dme_A 82 GVP-HQRLGKLIVATSDAEASQLDSIARRAGANGVDDLQHIDGAAARRLEPA-L---HCTAALVSPSTGIVDSHALMLAY 156 (369)
T ss_dssp TCC-EECCCEEEEECSHHHHTTHHHHHHHHHHTTCCCCEEEEHHHHHHHCTT-C---CCSEEEEETTCEEECHHHHHHHH
T ss_pred CCC-cccCCEEEEecCHHHHHHHHHHHHHHHHcCCCceeecCHHHHHHhCCC-c---eeeeeeECCCCEEECHHHHHHHH
Confidence 766 3455555554322 22345666677788887 889999999998887 3 35678888999999999999999
Q ss_pred HHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcCCC--cEEEcCEEEEcCCCChHHhhhhhcCCc----cceeEEEEE
Q 015088 160 QTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNG--EKFWGKKCVVTAGAWVGKLVKRITGLE----LPIQAVETT 233 (413)
Q Consensus 160 ~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g--~~i~ad~VV~A~G~~s~~l~~~~~g~~----~~~~~~~g~ 233 (413)
.+.+++.|++++++++|++|.. ++ ++.+.|.+.+| .+++||.||+|+|.|+..+++.+.|+. .++.|.+|+
T Consensus 157 ~~~~~~~Gv~i~~~~~v~~i~~--~~-~~~~~v~~~~g~~~~~~a~~VV~A~G~~s~~l~~~~~g~~~~~~~~i~p~rG~ 233 (369)
T 3dme_A 157 QGDAESDGAQLVFHTPLIAGRV--RP-EGGFELDFGGAEPMTLSCRVLINAAGLHAPGLARRIEGIPRDSIPPEYLCKGS 233 (369)
T ss_dssp HHHHHHTTCEEECSCCEEEEEE--CT-TSSEEEEECTTSCEEEEEEEEEECCGGGHHHHHHTEETSCGGGSCCCEEEEEE
T ss_pred HHHHHHCCCEEECCCEEEEEEE--cC-CceEEEEECCCceeEEEeCEEEECCCcchHHHHHHhcCCCccccceeeecceE
Confidence 9999999999999999999988 63 24477888888 379999999999999998887653553 479999999
Q ss_pred EEEEEecCCCCCccccCCCCCeEEEc--CCCceEecCCCCCCCcEEEecCCCCCCCCCCCCCCCchhHHHHHHHHHhhcC
Q 015088 234 VCYWRIKEGNEADYAVGGDFPSFASY--GDPYIYGTPSLEYPGLIKIALHGGYPCDPDRRPWGPGLLLDSLKEWIQGRFA 311 (413)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~y~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p 311 (413)
++.++.+... ....+... +...+++.+..+ |.+.+|.+.....+ .....+ .+..+.+.+.+.+++|
T Consensus 234 ~~~~~~~~~~--------~~~~~~~p~~~~~~~~~~~~~~--g~~~iG~t~e~~~~-~~~~~~-~~~~~~l~~~~~~~~P 301 (369)
T 3dme_A 234 YFTLAGRAPF--------SRLIYPVPQHAGLGVHLTLDLG--GQAKFGPDTEWIAT-EDYTLD-PRRADVFYAAVRSYWP 301 (369)
T ss_dssp EEECSSSCSC--------SSEEEECTTCSSCCCCEEECTT--SCEEECCCCEEESS-CCCCCC-GGGGGGHHHHHHTTCT
T ss_pred EEEECCCCcc--------CceeecCCCCCCceEEEeCccC--CcEEECCCcccccc-cccccC-HHHHHHHHHHHHHHCC
Confidence 8766532110 01111110 111233333332 44555442211001 111111 2267889999999999
Q ss_pred CCCCCCCCeeeceeeeeec-----CCCCeEe-cC-CCCCCCCCEEEEeCCCCCCCccchHHHHHHHHHHh
Q 015088 312 GRVDSNGPVATQLCMYSIT-----PDEDFVI-DF-LGGEFGEDVVVAGGFSGHGFKMAPAVGRILADLVL 374 (413)
Q Consensus 312 ~~~~~~~~~~~~~g~~~~t-----~d~~p~i-g~-~~~~~~~~~~~~~G~~~~G~~~a~~~a~~la~~i~ 374 (413)
.+.+. .+...|+|+||.+ +|+.|+| |+ ++.. +|+|+++|++++|++++|++|+++|++|.
T Consensus 302 ~l~~~-~v~~~w~G~Rp~~~~~~~~d~~p~i~g~~~~~~--~~l~~~~G~~~~G~t~ap~~a~~~a~~i~ 368 (369)
T 3dme_A 302 ALPDG-ALAPGYTGIRPKISGPHEPAADFAIAGPASHGV--AGLVNLYGIESPGLTASLAIAEETLARLA 368 (369)
T ss_dssp TCCTT-CCEEEEEEEEEESSCTTSCCCCCEEECHHHHCC--TTEEEEECCCTTHHHHHHHHHHHHHHHHC
T ss_pred CCChh-hceecceeccccccCCCCCcCCeEEecccccCC--CCEEEEeCCCCchHhccHHHHHHHHHHhh
Confidence 99864 6788999999996 5789988 87 4665 89999999999999999999999999984
No 14
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=100.00 E-value=8.2e-36 Score=276.44 Aligned_cols=312 Identities=10% Similarity=0.001 Sum_probs=220.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHcC------CcEEEEcccCCCCCCCcccCCCceeecccCC---CChHHHHHHHHHHHHHH
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRG------QKTLLLEQFDFLHHRGSSHGESRTIRATYPE---DYYHPMVLESCLLWEQA 78 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g------~~V~liE~~~~~gg~~~s~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~ 78 (413)
+||+|||||++|+++|++|+++| ++|+|||+.... .++|..+++.+...... .....+...+.+.|.++
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~~--~~aS~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFTP--LTTTDVAAGLWQPYLSDPNNPQEADWSQQTFDYLLSH 78 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCGG--GSGGGTCCCBCCCCSSCCSCTHHHHHHHHHHHHHHTT
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCCC--CCccccCcceeecccCCCchHHHHHHHHHHHHHHHHH
Confidence 38999999999999999999998 999999998754 35666667776653322 22334445555555554
Q ss_pred HHHhC---CeeEEeeceeeeCCCChhhHHHHHHHHhhCCCCccccCHHHHHHHcCCcccCCCCeEEEEecCCceeChHHH
Q 015088 79 QSEIG---YKVYFKAHQFDMGPSENKSLRSVIASCRKNSVPHQVLDCRQVLEKYSGRIEIPENWVGVATELGGVIKPTKA 155 (413)
Q Consensus 79 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (413)
..+.. ..+....+.+....... ...+...+.+++.++.+++ +.+|. ...+++.+ +++++|..+
T Consensus 79 ~~~~~~~~~~~~~~~g~~~~~~~~~------~~~~~~~~~~~~~l~~~e~-~~~p~------~~~~~~~~-~~~v~p~~~ 144 (351)
T 3g3e_A 79 VHSPNAENLGLFLISGYNLFHEAIP------DPSWKDTVLGFRKLTPREL-DMFPD------YGYGWFHT-SLILEGKNY 144 (351)
T ss_dssp TTSTTHHHHTEEEEEEEEEESSCCC------CCGGGGTSEEEEECCHHHH-TTCTT------CCEEEEEE-EEEECHHHH
T ss_pred hhccCCCCccEEEEEEEEEecCCcc------ccCHHHhCCCceECCHHHh-ccCCC------CceEEEec-ceEEcHHHH
Confidence 43321 12223444444333221 1223456677788898887 34443 34566666 589999999
Q ss_pred HHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCChHHhhhhhcCCccceeEEEEEEE
Q 015088 156 VSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWVGKLVKRITGLELPIQAVETTVC 235 (413)
Q Consensus 156 ~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s~~l~~~~~g~~~~~~~~~g~~~ 235 (413)
++.|.+.+++.|+++++ ++|+++.. .+ . ++||.||+|+|.|+..+++. .++.|.+|+++
T Consensus 145 ~~~l~~~~~~~Gv~i~~-~~V~~i~~--~~------------~-~~a~~VV~A~G~~s~~l~~~-----~~l~p~rg~~~ 203 (351)
T 3g3e_A 145 LQWLTERLTERGVKFFQ-RKVESFEE--VA------------R-EGADVIVNCTGVWAGALQRD-----PLLQPGRGQIM 203 (351)
T ss_dssp HHHHHHHHHHTTCEEEE-CCCCCHHH--HH------------H-TTCSEEEECCGGGGGGTSCC-----TTCEEEEEEEE
T ss_pred HHHHHHHHHHCCCEEEE-EEeCCHHH--hh------------c-CCCCEEEECCCcChHhhcCC-----CceeecCCcEE
Confidence 99999999999999998 88888755 31 1 67999999999999877643 68999999999
Q ss_pred EEEecCCCCCccccCCCCCeEEE----cCCCceEecCCCCCCCcEEEecCCCCCCCCCCCCCCCchhHHHHHHHHHhhcC
Q 015088 236 YWRIKEGNEADYAVGGDFPSFAS----YGDPYIYGTPSLEYPGLIKIALHGGYPCDPDRRPWGPGLLLDSLKEWIQGRFA 311 (413)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~y~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p 311 (413)
.++.+. . ..+++.. ..+..+|++|..+ +++.+++......++. . ..+..+.+.+.+.+++|
T Consensus 204 ~~~~~~-~--------~~~~~~~~~~~~~~~~~y~~p~~~--~~~iGg~~~~~~~~~~---~-~~~~~~~l~~~~~~~~P 268 (351)
T 3g3e_A 204 KVDAPW-M--------KHFILTHDPERGIYNSPYIIPGTQ--TVTLGGIFQLGNWSEL---N-NIQDHNTIWEGCCRLEP 268 (351)
T ss_dssp EEECTT-C--------CSEEEECCTTTCTTCSCEEEECSS--CEEEECCCEETCCCCS---C-CHHHHHHHHHHHHHHCG
T ss_pred EEeCCC-c--------ceEEEeccccCCCCceeEEEeCCC--cEEEeeeeecCCCCCC---C-CHHHHHHHHHHHHHhCC
Confidence 887421 1 1233221 1234589999865 5555444221111111 1 12368899999999999
Q ss_pred CCCCCCCCeeeceeeeeecCCCCeE----ecCCCCCCCCCEEEEeCCCCCCCccchHHHHHHHHHHhc
Q 015088 312 GRVDSNGPVATQLCMYSITPDEDFV----IDFLGGEFGEDVVVAGGFSGHGFKMAPAVGRILADLVLS 375 (413)
Q Consensus 312 ~~~~~~~~~~~~~g~~~~t~d~~p~----ig~~~~~~~~~~~~~~G~~~~G~~~a~~~a~~la~~i~~ 375 (413)
.+.+. ++...|+|+||+|+| .|+ ||.+|.. +|+|+++||+|+|+++||++|+++|++|.+
T Consensus 269 ~l~~~-~i~~~w~G~r~~t~D-~p~~~~~ig~~~~~--~~~~~~~G~~g~G~~~ap~~g~~la~li~~ 332 (351)
T 3g3e_A 269 TLKNA-RIIGERTGFRPVRPQ-IRLEREQLRTGPSN--TEVIHNYGHGGYGLTIHWGCALEAAKLFGR 332 (351)
T ss_dssp GGGGC-EEEEEEEEEEEECSS-CEEEEEEECCSSSC--EEEEEEECCTTCHHHHHHHHHHHHHHHHHH
T ss_pred CccCC-cEeeeeEeeCCCCCC-ccceeeeccCCCCC--CeEEEEeCCCcchHhhhHHHHHHHHHHHHH
Confidence 98764 678899999999999 874 7777766 899999999999999999999999999984
No 15
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=100.00 E-value=4.3e-35 Score=276.42 Aligned_cols=325 Identities=17% Similarity=0.108 Sum_probs=219.0
Q ss_pred CcccEEEECCCHHHHHHHHHHHHc--CCcEEEEcccCCCCCCCcccCCCc-ee--ecccCCCChHHHHHHHHHHHHHHHH
Q 015088 6 EKFDVIVVGAGIMGSSAAYQLAKR--GQKTLLLEQFDFLHHRGSSHGESR-TI--RATYPEDYYHPMVLESCLLWEQAQS 80 (413)
Q Consensus 6 ~~~dvvIIGaG~aG~~~A~~L~~~--g~~V~liE~~~~~gg~~~s~~~~~-~~--~~~~~~~~~~~l~~~~~~~~~~~~~ 80 (413)
.++||+|||||++|+++|++|+++ |++|+|||+....++ ++..+.+ .+ ...+... +..+...+.+.|.+
T Consensus 35 ~~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~~~--~s~~~~g~~i~~~~~~~~~-~~~l~~~~~~~~~~--- 108 (405)
T 3c4n_A 35 EAFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLPNE--EGATILAPGVWTAQDIPAG-QEAQAEWTREQLLG--- 108 (405)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSSCT--TSHHHHCCCEECGGGCCTT-CHHHHHHHHHHHHT---
T ss_pred CcCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCCCc--chhccCCcceeecccCCch-HHHHHHHHHHHHHH---
Confidence 358999999999999999999999 999999999866533 2222223 12 3333333 56677777777765
Q ss_pred HhCC--ee-EEeeceeeeCCCChhhHHHHHHHHhhCCCCccccCHHHHHHHcCCccc----CCCCeEEEEecCCceeChH
Q 015088 81 EIGY--KV-YFKAHQFDMGPSENKSLRSVIASCRKNSVPHQVLDCRQVLEKYSGRIE----IPENWVGVATELGGVIKPT 153 (413)
Q Consensus 81 ~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 153 (413)
..+. +. +...+.+..... ....+ .++.+++.+.+|. +. .+....+++.+..+++++.
T Consensus 109 ~~~~~~~~~~~~~g~l~~~~~-----------~~~~g----~l~~~~~~~~~p~-~~~~~~~~~~~~~~~~~~~g~v~~~ 172 (405)
T 3c4n_A 109 ALGSGKTLEVEDRPLLHLLPA-----------GEGSG----LTPTLDALADFPE-ALALLDPARLPVARVDPRALTYRPG 172 (405)
T ss_dssp GGGSSCCCCEEECCEEEEESS-----------CCSSS----CEEHHHHTTTCHH-HHTTSCTTTSCEEEEETTCEEECHH
T ss_pred HhCCCCCCcEEeeCeEEehhh-----------HhHCC----CCCHHHHHHhCCC-ccccccCCcceEEEEcCCCEEEcHH
Confidence 3333 22 344444432111 01112 3444444444332 22 1456678889999999999
Q ss_pred HHHHHHHHHHHHCCCEEEcCceEE---------EEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCChHHhhh-hhcCC
Q 015088 154 KAVSMFQTLAIKNGAVLRDNMEVK---------TVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWVGKLVK-RITGL 223 (413)
Q Consensus 154 ~~~~~l~~~~~~~Gv~i~~~~~V~---------~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s~~l~~-~~~g~ 223 (413)
.++..|.+.+++.|++++++++|+ ++.. + ++.+.|++.+| +++||.||+|+|.|+..+.+ .+ +.
T Consensus 173 ~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~--~--~~~v~v~~~~g-~i~a~~VV~A~G~~s~~l~~~~~-g~ 246 (405)
T 3c4n_A 173 SLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTV--T--NTHQIVVHETR-QIRAGVIIVAAGAAGPALVEQGL-GL 246 (405)
T ss_dssp HHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC-----------CBCCE-EEEEEEEEECCGGGHHHHHHHHH-CC
T ss_pred HHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEe--e--CCeEEEEECCc-EEECCEEEECCCccHHHHHHHhc-CC
Confidence 999999999999999999999999 8876 5 34557777777 59999999999999988888 66 88
Q ss_pred ccceeEEEEEEEEEEecCCCCCccccCCCCCeEEEcCCCceEecCCCCCCCcEEEecCC---CCCCCCCC------CCCC
Q 015088 224 ELPIQAVETTVCYWRIKEGNEADYAVGGDFPSFASYGDPYIYGTPSLEYPGLIKIALHG---GYPCDPDR------RPWG 294 (413)
Q Consensus 224 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~p~~~~~~~~~~~~~~---~~~~~~~~------~~~~ 294 (413)
.+++.+.+++++.++.+.. .+ .+.+. . ..+|++|..+ +.+.+|... ....+++. ....
T Consensus 247 ~~~~~~~~g~~~~~~~~~~---~~-----~~~~~-~--~~~y~~p~~~--g~~~~G~t~~~~~~~~~~~~~~~~~~~~~~ 313 (405)
T 3c4n_A 247 HTRHGRAYRQFPRLDLLSG---AQ-----TPVLR-A--SGLTLRPQNG--GYTLVPAIHHRDPHGYHPAGGSLTGVPTGL 313 (405)
T ss_dssp CCCCEEEEEECCEECSCCC---TT-----CCEEE-E--TTEEEEEETT--EEEEECCCCSCBCSSCCCCCCCBTTBCCSS
T ss_pred CCCcccceeEEEEECCCCc---cC-----CCeEE-C--CcEEEEEcCC--CeEEEeccccccccCcCcccccccccccCC
Confidence 8899999999877653221 00 12222 2 2489998765 555554421 11112110 0111
Q ss_pred CchhHHHHHHHHHhhcCCCCCCC--------CCeeeceeeeeecCCCCeEecCCCCCCCCCEEEEeCCCCCCCccchHHH
Q 015088 295 PGLLLDSLKEWIQGRFAGRVDSN--------GPVATQLCMYSITPDEDFVIDFLGGEFGEDVVVAGGFSGHGFKMAPAVG 366 (413)
Q Consensus 295 ~~~~~~~l~~~~~~~~p~~~~~~--------~~~~~~~g~~~~t~d~~p~ig~~~~~~~~~~~~~~G~~~~G~~~a~~~a 366 (413)
..+..+.+.+.+ ++||.+.+.. .+...|+|+||+|+|+.|+||+++ +|+|+++|++|+ ++++|++|
T Consensus 314 ~~~~~~~l~~~~-~~~P~l~~~~~~~~r~~~~i~~~w~G~r~~t~D~~P~ig~~~----~gl~~a~G~~g~-~~~ap~~a 387 (405)
T 3c4n_A 314 RRELLEDLVGLM-DAVPALAGEGLELGRSSADVPGAWLALPGGRPDAPPQAEELA----PGLHLLLGGPLA-DTLGLAAA 387 (405)
T ss_dssp CHHHHHHHHHHT-TTCGGGGSSCBCCCSSGGGSCEEEEEEGGGCTTCCCEEEEEE----TTEEEEECCTTH-HHHHHHHH
T ss_pred CHHHHHHHHHHH-HhCCCccccCccccccccceeeEEEeecCcCCCCCCEecccC----CCeEEEEccCcH-HHHHHHHH
Confidence 122455565544 8899887541 167799999999999999999987 789999999886 59999999
Q ss_pred HHHHHHHhcCC
Q 015088 367 RILADLVLSGE 377 (413)
Q Consensus 367 ~~la~~i~~g~ 377 (413)
+++|++|.++.
T Consensus 388 ~~la~~i~~~~ 398 (405)
T 3c4n_A 388 HELAQRVSASL 398 (405)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHhCch
Confidence 99999998543
No 16
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=100.00 E-value=2e-33 Score=261.66 Aligned_cols=317 Identities=13% Similarity=0.016 Sum_probs=213.2
Q ss_pred CCCcccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCC---cccCCCceeeccc---CCCChHHHHHHHHHHHHH
Q 015088 4 PGEKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRG---SSHGESRTIRATY---PEDYYHPMVLESCLLWEQ 77 (413)
Q Consensus 4 ~~~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~gg~~---~s~~~~~~~~~~~---~~~~~~~l~~~~~~~~~~ 77 (413)
|+.++||+|||||++|+++|++|+++|++|+|||+.....+.. ++...++.+.... .......+...+.+.|.+
T Consensus 3 m~~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~~~g~s~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (363)
T 1c0p_A 3 MHSQKRVVVLGSGVIGLSSALILARKGYSVHILARDLPEDVSSQTFASPWAGANWTPFMTLTDGPRQAKWEESTFKKWVE 82 (363)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCTTCTTCTTSSGGGCCCBCCCCSCTTTCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCCCCcCCcCcccCcccccccCcccCCCchHHHHHHHHHHHHHHH
Confidence 4557899999999999999999999999999999987553211 1222223332221 223345666677777777
Q ss_pred HHHH-hCCeeEEeeceeeeCCCChhhHHHHHHHHhhCCCCccccCHHHHHHHcCCcccCCCCeEEEEecCCceeChHHHH
Q 015088 78 AQSE-IGYKVYFKAHQFDMGPSENKSLRSVIASCRKNSVPHQVLDCRQVLEKYSGRIEIPENWVGVATELGGVIKPTKAV 156 (413)
Q Consensus 78 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (413)
+... .++. ..+.+.+...+.. ...++++..+.+++.++.+++ |. ...+.+. .+++++|..++
T Consensus 83 ~~~~~~g~~---~~~~~~~~~~~~~---~~~~~~~~~g~~~~~l~~~~~----p~------~~~g~~~-~~~~v~p~~~~ 145 (363)
T 1c0p_A 83 LVPTGHAMW---LKGTRRFAQNEDG---LLGHWYKDITPNYRPLPSSEC----PP------GAIGVTY-DTLSVHAPKYC 145 (363)
T ss_dssp HTTTTSSEE---EEEEEEEESSGGG---GGGGTTTTTSTTCEECCGGGS----ST------TCEEEEE-EEEECCHHHHH
T ss_pred hCcccCCeE---EECCEEEEecCcc---chhHHHHHhCCCcEECCHHHC----CC------ceEEEEE-ecceecHHHHH
Confidence 7544 4433 2223322222211 122234455666677776543 21 2235555 67899999999
Q ss_pred HHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCChHHhhhhhcCCccceeEEEEEEEE
Q 015088 157 SMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWVGKLVKRITGLELPIQAVETTVCY 236 (413)
Q Consensus 157 ~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s~~l~~~~~g~~~~~~~~~g~~~~ 236 (413)
..|.+.+++.|++++. ++|+++.. + . + +||.||+|+|.|+..+... ...++.|.+|+++.
T Consensus 146 ~~l~~~~~~~G~~i~~-~~v~~l~~--~--------~-----~-~a~~VV~A~G~~s~~l~~~---~~~~~~p~rg~~~~ 205 (363)
T 1c0p_A 146 QYLARELQKLGATFER-RTVTSLEQ--A--------F-----D-GADLVVNATGLGAKSIAGI---DDQAAEPIRGQTVL 205 (363)
T ss_dssp HHHHHHHHHTTCEEEE-CCCSBGGG--T--------C-----S-SCSEEEECCGGGGGTSBTT---CCTTEEEEEEEEEE
T ss_pred HHHHHHHHHCCCEEEE-EEcccHhh--c--------C-----c-CCCEEEECCCcchhhccCc---ccCCccccCCeEEE
Confidence 9999999999999998 88888744 2 1 1 6999999999999877653 36789999999998
Q ss_pred EEecCCCCCccccCCCCCeEEEc-CCCceEecCCCCCCCcEEEecCCCC-CCCCCCCCCCCchhHHHHHHHHHhhcCCCC
Q 015088 237 WRIKEGNEADYAVGGDFPSFASY-GDPYIYGTPSLEYPGLIKIALHGGY-PCDPDRRPWGPGLLLDSLKEWIQGRFAGRV 314 (413)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~y~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~ 314 (413)
++.+.. ++.+... .....|++|..+ +.+.+|.+... ..+. .. ..+..+.+.+.+.+++|.+.
T Consensus 206 ~~~~~~----------~~~~~~~~~~~~~y~~p~~~--g~~~iG~t~~~~~~~~---~~-~~~~~~~l~~~~~~~~P~l~ 269 (363)
T 1c0p_A 206 VKSPCK----------RCTMDSSDPASPAYIIPRPG--GEVICGGTYGVGDWDL---SV-NPETVQRILKHCLRLDPTIS 269 (363)
T ss_dssp EECCCC----------CCEEECSCTTCCEEEEEETT--TEEEEECCCEETCCCC---SC-CHHHHHHHHHHHHHHCGGGS
T ss_pred EeCCcc----------cceEeeccCCCcEEEEEcCC--CEEEEEeeeccCCCCC---CC-CHHHHHHHHHHHHHhCcccc
Confidence 874331 1111111 112378888763 44555442211 1111 11 12267899999999999883
Q ss_pred ------CCCCCeeeceeeeeecCCCCeEecCC-C-------C----------CC-C--CCEEEEeCCCCCCCccchHHHH
Q 015088 315 ------DSNGPVATQLCMYSITPDEDFVIDFL-G-------G----------EF-G--EDVVVAGGFSGHGFKMAPAVGR 367 (413)
Q Consensus 315 ------~~~~~~~~~~g~~~~t~d~~p~ig~~-~-------~----------~~-~--~~~~~~~G~~~~G~~~a~~~a~ 367 (413)
+. +++..|+|+||+|+|+.|++|+. + + .+ . +|+|+++||+|+|+++||++|+
T Consensus 270 ~~~~~~~~-~i~~~w~G~rp~t~d~~piig~~~~~~~~~~~~~~d~~~~~g~~p~~~~~~~~~a~G~~g~G~~~a~~~g~ 348 (363)
T 1c0p_A 270 SDGTIEGI-EVLRHNVGLRPARRGGPRVEAERIVLPLDRTKSPLSLGRGSARAAKEKEVTLVHAYGFSSAGYQQSWGAAE 348 (363)
T ss_dssp SSSSGGGC-EEEEEEEEEEEEETTSCEEEEEEEEESCCTTTCTTCSSCTTCCCSCCEEEEEEEEECCTTCHHHHHHHHHH
T ss_pred CCcccccc-eEeeceEEECCCCCCCceeEEEecccccccccCccccccccccccccccceEEEecCCCCcchheeccHHH
Confidence 23 57789999999999999998873 1 0 00 1 4799999999999999999999
Q ss_pred HHHHHHh
Q 015088 368 ILADLVL 374 (413)
Q Consensus 368 ~la~~i~ 374 (413)
++|++|.
T Consensus 349 ~~a~li~ 355 (363)
T 1c0p_A 349 DVAQLVD 355 (363)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999997
No 17
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.97 E-value=1.5e-29 Score=244.58 Aligned_cols=342 Identities=16% Similarity=0.131 Sum_probs=226.2
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCcccCCCceeecccC--CCChHHHHHHHHHHHHHHHHHhCC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESRTIRATYP--EDYYHPMVLESCLLWEQAQSEIGY 84 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~gg~~~s~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~ 84 (413)
++||+|||||++|+++|+.|+++|++|+|||+.+.. .++|..+++.++.... ......+..++...+..+.+....
T Consensus 3 ~~DVvIIGgGi~G~~~A~~La~~G~~V~llE~~~~~--~gtS~~s~gli~~g~~~~~~~~~~l~~~~~~~~~~l~~~~~~ 80 (501)
T 2qcu_A 3 TKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQDLA--CATSSASSKLIHGGLRYLEHYEFRLVSEALAEREVLLKMAPH 80 (501)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTT--CSGGGSSCCEECCCGGGGGGTCHHHHHHHHHHHHHHHHHCTT
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCEEEEECCCCC--CCccccccccccccchhhhhchHHHHHHHHHHHHHHHHhCCc
Confidence 589999999999999999999999999999998754 3566677777664321 123356666777777666544332
Q ss_pred eeEEeeceeeeCCCC---hhhHHHHHHHHhhCCCCccccCHHHHHHHc--CCcccCCCCeEEEEecCCceeChHHHHHHH
Q 015088 85 KVYFKAHQFDMGPSE---NKSLRSVIASCRKNSVPHQVLDCRQVLEKY--SGRIEIPENWVGVATELGGVIKPTKAVSMF 159 (413)
Q Consensus 85 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 159 (413)
+....+.+...... ..............+ ..+.++.+++.+.+ |. +. .....+++. .+++++|..++..+
T Consensus 81 -l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~P~-l~-~~~~~~~~~-~~g~v~~~~l~~~l 155 (501)
T 2qcu_A 81 -IAFPMRFRLPHRPHLRPAWMIRIGLFMYDHLG-KRTSLPGSTGLRFGANSV-LK-PEIKRGFEY-SDCWVDDARLVLAN 155 (501)
T ss_dssp -TEEEEEEEEECCTTTSCHHHHHHHHHHHHSSS-CCSSSCCCEEEECCTTSS-BC-TTCCEEEEE-EEEEECHHHHHHHH
T ss_pred -cccccCeEeccCcccchHHHHHHHHHHHHhcC-CcEEECHHHHHHhhcCCC-cc-hhceEEEEe-eCCEEcHHHHHHHH
Confidence 22222222111111 111111222222222 45666666555555 55 33 123334444 56889999999999
Q ss_pred HHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEc---CCCc--EEEcCEEEEcCCCChHHhhhh-hcCC--ccceeEEE
Q 015088 160 QTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVT---SNGE--KFWGKKCVVTAGAWVGKLVKR-ITGL--ELPIQAVE 231 (413)
Q Consensus 160 ~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~---~~g~--~i~ad~VV~A~G~~s~~l~~~-~~g~--~~~~~~~~ 231 (413)
.+.+.+.|++++++++|+++.. + ++.+.|.+ .+|+ +++||.||+|+|+|+..+.+. + +. ..++.|.+
T Consensus 156 ~~~a~~~Gv~i~~~~~V~~l~~--~--~~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~~l~~~~l-~~~~~~~i~p~r 230 (501)
T 2qcu_A 156 AQMVVRKGGEVLTRTRATSARR--E--NGLWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFDDGM-HLPSPYGIRLIK 230 (501)
T ss_dssp HHHHHHTTCEEECSEEEEEEEE--E--TTEEEEEEEETTTCCEEEEEESCEEECCGGGHHHHHHHHT-CCCCSSCBCCEE
T ss_pred HHHHHHcCCEEEcCcEEEEEEE--e--CCEEEEEEEECCCCCEEEEECCEEEECCChhHHHHHHHhc-cCCcccccccce
Confidence 9999999999999999999988 6 35666766 3564 699999999999999988875 4 33 36899999
Q ss_pred EEEEEEEecCCCCCccccCCCCCeEEE-cCCCceEecCCCCCCCcEEEecCCC-CCCCCCCCCCCCchhHHHHHHHHHhh
Q 015088 232 TTVCYWRIKEGNEADYAVGGDFPSFAS-YGDPYIYGTPSLEYPGLIKIALHGG-YPCDPDRRPWGPGLLLDSLKEWIQGR 309 (413)
Q Consensus 232 g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~y~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~ 309 (413)
|+++.++. . . . ...+.+.. .++..+|++|..+ +.+.+|+++. ...+++....+ .+..+.|++.+.++
T Consensus 231 G~~~~~~~-~-~----~--~~~~~~~~~~dg~~~~~~P~~~--g~~~iG~t~~~~~~~~~~~~~~-~~~~~~l~~~~~~~ 299 (501)
T 2qcu_A 231 GSHIVVPR-V-H----T--QKQAYILQNEDKRIVFVIPWMD--EFSIIGTTDVEYKGDPKAVKIE-ESEINYLLNVYNTH 299 (501)
T ss_dssp EEEEEEEC-S-S----S--CSCEEEEECTTSCEEEEEEETT--TEEEEECCCEECCSCGGGCCCC-HHHHHHHHHHHHHH
T ss_pred eEEEEECC-C-C----C--CceEEEeecCCCCEEEEEEcCC--CcEEEcCCCCCCCCCcCCCCCC-HHHHHHHHHHHHHh
Confidence 99987762 1 1 1 11233332 2345689999764 5555554321 11122111111 22688999999999
Q ss_pred cC-CCCCCCCCeeeceeeeeecCCCCeEecCCCCC---------CCCCEEEEeCCCCCCCccchHHHHHHHHHHhc
Q 015088 310 FA-GRVDSNGPVATQLCMYSITPDEDFVIDFLGGE---------FGEDVVVAGGFSGHGFKMAPAVGRILADLVLS 375 (413)
Q Consensus 310 ~p-~~~~~~~~~~~~~g~~~~t~d~~p~ig~~~~~---------~~~~~~~~~G~~~~G~~~a~~~a~~la~~i~~ 375 (413)
|| .+.+. .++..|+|+||.++|+.|+++.++.. ..++++.++| .|++.+|.+|+.+++++.+
T Consensus 300 ~p~~l~~~-~v~~~~aG~Rp~~~d~~p~~~~~~~~~~i~~~~~~~~~gl~~i~G---g~~t~~~~~Ae~~~~~~~~ 371 (501)
T 2qcu_A 300 FKKQLSRD-DIVWTYSGVRPLCDDESDSPQAITRDYTLDIHDENGKAPLLSVFG---GKLTTYRKLAEHALEKLTP 371 (501)
T ss_dssp BSSCCCGG-GCCEEEEEEECCBCCCCSSGGGSCCCCEEEEEEETTEEEEEEEEC---CCGGGHHHHHHHHHHHHGG
T ss_pred cCCCCCcc-cEEEEEEEEeeecCCCCCccccCcCceEEEecccCCCCCeEEEeC---ccccchHHHHHHHHHHHHH
Confidence 99 67653 57789999999999999988877531 0023444443 3799999999999999984
No 18
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.97 E-value=3.9e-29 Score=244.49 Aligned_cols=342 Identities=15% Similarity=0.100 Sum_probs=223.3
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCcccCCCceeecccC--CCChHHHHHHHHHHHHHHHHHhC
Q 015088 6 EKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESRTIRATYP--EDYYHPMVLESCLLWEQAQSEIG 83 (413)
Q Consensus 6 ~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~gg~~~s~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~ 83 (413)
.++||+|||||++|+++|+.|+++|++|+|||+++.. .++|..+++.++.... ......+..++...+..+.....
T Consensus 31 ~~~DVvVIGgGi~G~~~A~~La~rG~~V~LlE~~~~~--~GtS~~s~gli~~g~ryl~~~~~~l~~~~~~e~~~l~~~~~ 108 (571)
T 2rgh_A 31 EELDLLIIGGGITGAGVAVQAAASGIKTGLIEMQDFA--EGTSSRSTKLVHGGIRYLKTFDVEVVADTVGERAVVQGIAP 108 (571)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTT--CSGGGSSCSEECCCGGGGGGTCHHHHHHHHHHHHHHHHHCT
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCC--CCcccccccccccccchhhccChHHHHHHHHHHHHHHHhCc
Confidence 3689999999999999999999999999999998765 3566666666654321 12223444555444443333211
Q ss_pred CeeEEeeceee--eCCC-----Chhh---HHHHHHHHh---hCCCCccccCHHHHHHHcCCcccCCCCeEEEEecCCcee
Q 015088 84 YKVYFKAHQFD--MGPS-----ENKS---LRSVIASCR---KNSVPHQVLDCRQVLEKYSGRIEIPENWVGVATELGGVI 150 (413)
Q Consensus 84 ~~~~~~~~~~~--~~~~-----~~~~---~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (413)
.+....+.+. .... .... .....+++. ..+...+.++.+++.+.+|. +..+....+++.+. +++
T Consensus 109 -~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~e~~~~~P~-l~~~~~~gg~~~~d-g~v 185 (571)
T 2rgh_A 109 -HIPKPDPMLLPIYEDEGATTFNMFSVKVAMDLYDKLANVTGTKYENYTLTPEEVLEREPF-LKKEGLKGAGVYLD-FRN 185 (571)
T ss_dssp -TSSEECCEEEEEESSSSSCSCCHHHHHHHHHHHHHHHTCSSSTTCCEEECHHHHHHHCTT-SCCTTEEEEEEECC-EEC
T ss_pred -ccccccCceEEeecccccccccHHHHHHHHHHHHHHhhhhccCCCcEEECHHHHHHhCcC-CchhhceEEEEecC-CeE
Confidence 1111222221 1110 0111 122233332 34556788999999999987 54333444556654 788
Q ss_pred ChHHHHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcC---CC--cEEEcCEEEEcCCCChHHhhhhhcCCc-
Q 015088 151 KPTKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTS---NG--EKFWGKKCVVTAGAWVGKLVKRITGLE- 224 (413)
Q Consensus 151 ~~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~---~g--~~i~ad~VV~A~G~~s~~l~~~~~g~~- 224 (413)
+|.+++..+.+.+++.|++|+++++|+++.. ++ +..+.|++. +| .+++||.||+|+|+|+..+.+.. +..
T Consensus 186 ~~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~--~~-~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws~~l~~~~-g~~~ 261 (571)
T 2rgh_A 186 NDARLVIDNIKKAAEDGAYLVSKMKAVGFLY--EG-DQIVGVKARDLLTDEVIEIKAKLVINTSGPWVDKVRNLN-FTRP 261 (571)
T ss_dssp CHHHHHHHHHHHHHHTTCEEESSEEEEEEEE--ET-TEEEEEEEEETTTCCEEEEEBSCEEECCGGGHHHHHTTC-CSSC
T ss_pred chHHHHHHHHHHHHHcCCeEEeccEEEEEEE--eC-CEEEEEEEEEcCCCCEEEEEcCEEEECCChhHHHHHHhh-ccCc
Confidence 9999999999999999999999999999988 63 244455531 23 26999999999999999888765 543
Q ss_pred --cceeEEEEEEEEEEecCCCCCccccCCCCCeEEE---cCCCceEecCCCCCCCcEEEecCCC-CCCCCCCCCCCCchh
Q 015088 225 --LPIQAVETTVCYWRIKEGNEADYAVGGDFPSFAS---YGDPYIYGTPSLEYPGLIKIALHGG-YPCDPDRRPWGPGLL 298 (413)
Q Consensus 225 --~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~y~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 298 (413)
.++.|.+|+++.++..... ...+.+.. .++..+|++|.. +.+.+|+++. ...++..... ..+.
T Consensus 262 ~~~~i~p~rG~~l~~~~~~~~-------~~~~~~~~~~~~dgr~~~~~P~~---~~~~iG~t~~~~~~~~~~~~~-~~~~ 330 (571)
T 2rgh_A 262 VSPKMRPTKGIHLVVDAKKLP-------VPQPTYFDTGKQDGRMVFAIPRE---NKTYFGTTDTDYQGDFTDPKV-TQED 330 (571)
T ss_dssp CCCCBCCEEEEEEEEEGGGSC-------CSSCEEEECSSSSSCEEEEEEET---TEEEECCCCEECCSCSSSCCC-CHHH
T ss_pred cCceeeccceEEEEeccccCC-------CCcEEEEeccCCCCcEEEEEEcC---CeEEEcCCCcCCCCCcCCCCC-CHHH
Confidence 5699999999988632210 11344443 234457888874 3455554331 1112211111 1236
Q ss_pred HHHHHHHHHhhcCCC--CCCCCCeeeceeeeeecCCCC---------eEecCCCCCCCCCEEEEeCCCCCCCccchHHHH
Q 015088 299 LDSLKEWIQGRFAGR--VDSNGPVATQLCMYSITPDED---------FVIDFLGGEFGEDVVVAGGFSGHGFKMAPAVGR 367 (413)
Q Consensus 299 ~~~l~~~~~~~~p~~--~~~~~~~~~~~g~~~~t~d~~---------p~ig~~~~~~~~~~~~~~G~~~~G~~~a~~~a~ 367 (413)
.+.|++.+.++||.+ .+. .++..|+|+||.++|+. |+|+..+ ++++.++| |. ++.++.+|+
T Consensus 331 ~~~ll~~~~~~~P~~~l~~~-~v~~~waG~Rp~~~d~~~~~~~~~r~~~i~~~~----~gl~~v~G--Gk-~Tt~r~~Ae 402 (571)
T 2rgh_A 331 VDYLLDVINHRYPEANITLA-DIEASWAGLRPLLIGNSGSPSTISRGSSLEREP----DGLLTLSG--GK-ITDYRKMAE 402 (571)
T ss_dssp HHHHHHHHHHHSTTTCCCGG-GCCEEEEEEECCBCC-----------EEEEECT----TSCEEEEE--CC-GGGHHHHHH
T ss_pred HHHHHHHHHHhcCccCCchh-ceeEEeEEeeeccCCCCCCcccCCCCcEEecCC----CCeEEEeC--cc-hhhHHHHHH
Confidence 889999999999974 432 56789999999998753 6776532 77886654 22 999999999
Q ss_pred HHHHHHhc
Q 015088 368 ILADLVLS 375 (413)
Q Consensus 368 ~la~~i~~ 375 (413)
.+++++.+
T Consensus 403 ~~~~~i~~ 410 (571)
T 2rgh_A 403 GALRLIRQ 410 (571)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998874
No 19
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.96 E-value=1.9e-27 Score=232.16 Aligned_cols=342 Identities=18% Similarity=0.154 Sum_probs=208.0
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCcccCCCceeecccC--CCChHHHHHHHHHHHHHHHHHhC
Q 015088 6 EKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESRTIRATYP--EDYYHPMVLESCLLWEQAQSEIG 83 (413)
Q Consensus 6 ~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~gg~~~s~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~ 83 (413)
..+||+|||||++|+++|+.|+++|++|+|||+++..+ ++|..+++.++.... ......+..+.......+.+...
T Consensus 17 ~~~DVvVIGgGi~Gl~~A~~La~~G~~V~LlEk~d~~~--GtS~~ss~lihgG~ryl~~~~~~l~~e~~~e~~~l~~~ap 94 (561)
T 3da1_A 17 KQLDLLVIGGGITGAGIALDAQVRGIQTGLVEMNDFAS--GTSSRSTKLVHGGLRYLKQFEIKLVAEVGKERAIVYENAP 94 (561)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSSTTC--SGGGSSCCEECC---------------CHHHHHHHHHHCT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCcEEEEECCCCCC--CcccCCcCccccchHHHHhcCHHHHHHHHHHHHHHHHhCc
Confidence 46999999999999999999999999999999997664 445555555543221 11111222222222222222211
Q ss_pred C---ee--EEe---eceeeeCC-CChhhHHHHHHHHhhCCCCccccCHHHHHHHcCCcccCCCCeEEEEecCCceeChHH
Q 015088 84 Y---KV--YFK---AHQFDMGP-SENKSLRSVIASCRKNSVPHQVLDCRQVLEKYSGRIEIPENWVGVATELGGVIKPTK 154 (413)
Q Consensus 84 ~---~~--~~~---~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (413)
. .. ... .+.+.... .....+....... ......+.++.+++.+.+|. +.......+++.+ ++++++.+
T Consensus 95 ~l~~~~~~~~p~~~~~~~~~~~~~~g~~~~d~l~~~-~~~~~~~~l~~~~~~~~~P~-l~~~~~~gg~~~~-dg~vd~~~ 171 (561)
T 3da1_A 95 HVTTPEWMLLPIFKDGTFGKFSTSLGLKVYDYLADV-RKDERRYMLNEKQTLEKEPL-LRKENLKGGGIYV-EYRTDDAR 171 (561)
T ss_dssp TTCEEEEEEEEECC----------------------------CEEECHHHHHHHCTT-SCCTTCCEEEEEE-EEECCHHH
T ss_pred hhccccceeEeecCCccHHHHHHHhHHHHHHHhhcc-cCCCCcEEECHHHHHHhCcc-CChhhceeEEEec-CceEcHHH
Confidence 1 10 010 00110000 0000111111111 11334678899999999887 5433344455555 45999999
Q ss_pred HHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcC---CC--cEEEcCEEEEcCCCChHHhhhhhcCCc--cce
Q 015088 155 AVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTS---NG--EKFWGKKCVVTAGAWVGKLVKRITGLE--LPI 227 (413)
Q Consensus 155 ~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~---~g--~~i~ad~VV~A~G~~s~~l~~~~~g~~--~~~ 227 (413)
++..+.+.+++.|++++++++|+++.. ++ +..+.|++. +| .+++|+.||+|+|+|+..+.+.+ +.. .++
T Consensus 172 l~~~L~~~a~~~G~~i~~~~~V~~l~~--~~-g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s~~l~~~~-g~~~~~~v 247 (561)
T 3da1_A 172 LTLEIMKEAVARGAVALNYMKVESFIY--DQ-GKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWVDTLREKD-RSKHGKYL 247 (561)
T ss_dssp HHHHHHHHHHHTTCEEEESEEEEEEEE--ET-TEEEEEEEEETTTCCEEEEEEEEEEECCGGGHHHHHHTT-TCCCSSEE
T ss_pred HHHHHHHHHHHcCCEEEcCCEEEEEEE--cC-CeEEEEEEEEcCCCceEEEECCEEEECCCcchHHHHHhc-CCCCCceE
Confidence 999999999999999999999999988 63 234455543 23 37999999999999999888876 654 689
Q ss_pred eEEEEEEEEEEecCCCCCccccCCCCCeEEE--cCCCceEecCCCCCCCcEEEecCCC-CCCCCCCCCCCCchhHHHHHH
Q 015088 228 QAVETTVCYWRIKEGNEADYAVGGDFPSFAS--YGDPYIYGTPSLEYPGLIKIALHGG-YPCDPDRRPWGPGLLLDSLKE 304 (413)
Q Consensus 228 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~y~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~ 304 (413)
.+.+|+++.+..+... ...+.+.. .++..+|++|. + |.+.+|+++. +..++.....+ .+..+.|++
T Consensus 248 ~p~kG~~lvl~~~~~~-------~~~~~~~~~~~dgr~v~~iP~-~--g~~~iGtT~~~~~~~~~~~~~t-~~~i~~ll~ 316 (561)
T 3da1_A 248 KLSKGVHLVVDQSRFP-------LRQAVYFDTESDGRMIFAIPR-E--GKTYIGTTDTFYDKDIASPRMT-VEDRDYILA 316 (561)
T ss_dssp EEEEEEEEEEEGGGSC-------CSSEEEECCSSSCCCEEEEEE-T--TEEEECCCCEEECSCTTCCCCC-HHHHHHHHH
T ss_pred EeccEEEEEECCccCC-------CceEEEeccCCCCcEEEEEec-C--CCEEEcCCCCccCCCcCCCCCC-HHHHHHHHH
Confidence 9999999887633211 11233322 23445788888 2 4555555432 11122211112 237889999
Q ss_pred HHHhhcCCCC--CCCCCeeeceeeeeecCCC---------CeEecCCCCCCCCCEEEEeCCCCCCCccchHHHHHHHHHH
Q 015088 305 WIQGRFAGRV--DSNGPVATQLCMYSITPDE---------DFVIDFLGGEFGEDVVVAGGFSGHGFKMAPAVGRILADLV 373 (413)
Q Consensus 305 ~~~~~~p~~~--~~~~~~~~~~g~~~~t~d~---------~p~ig~~~~~~~~~~~~~~G~~~~G~~~a~~~a~~la~~i 373 (413)
.+++++|.+. . ..++..|+|+||.+.|. ..+|...+ ++++.+.| |. ++.++.+|+.+++++
T Consensus 317 ~~~~~~P~l~~~~-~~v~~~~aGlRPl~~~~~~~~~~~sR~~~i~~~~----~gli~i~G--gk-~Tt~r~mAe~~~d~~ 388 (561)
T 3da1_A 317 AANYMFPSLRLTA-DDVESSWAGLRPLIHEEGKKASEISRKDEIFFSD----SGLISIAG--GK-LTGYRKMAERTVDAV 388 (561)
T ss_dssp HHHHHCTTCCCCT-TTEEEEEEEEEEEEEC-----------CCEEECS----SCCEEECC--CC-STTHHHHHHHHHHHH
T ss_pred HHHHhCCCCCCCh-hhEEEEeEEeccccCCCCCCccccccceEEEecC----CCeEEEeC--Ch-hhhHHHHHHHHHHHH
Confidence 9999999875 3 25788999999987551 23333322 67777765 34 999999999999988
Q ss_pred hc
Q 015088 374 LS 375 (413)
Q Consensus 374 ~~ 375 (413)
.+
T Consensus 389 ~~ 390 (561)
T 3da1_A 389 AQ 390 (561)
T ss_dssp HH
T ss_pred HH
Confidence 74
No 20
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.76 E-value=1.6e-16 Score=155.01 Aligned_cols=223 Identities=14% Similarity=0.018 Sum_probs=119.9
Q ss_pred ceeChHHHHHHHHHHHHHCCCEEEcCceEEEEEEecccCCC----eEEEEcCCC---cEEEcCEEEEcCCCChHHhhhhh
Q 015088 148 GVIKPTKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKG----GVTVVTSNG---EKFWGKKCVVTAGAWVGKLVKRI 220 (413)
Q Consensus 148 ~~~~~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~----~~~v~~~~g---~~i~ad~VV~A~G~~s~~l~~~~ 220 (413)
..++...+...|.+.+++.|++++++++|++++. + ++ ++.+++.++ .+++||+||.|+|.+| .+.+.+
T Consensus 115 ~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~--~--~~~~~~~v~v~~~~~~~~~~i~a~~vV~AdG~~S-~vR~~l 189 (535)
T 3ihg_A 115 AMLSQDKLEPILLAQARKHGGAIRFGTRLLSFRQ--H--DDDAGAGVTARLAGPDGEYDLRAGYLVGADGNRS-LVRESL 189 (535)
T ss_dssp BCCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEE--E--CGGGCSEEEEEEEETTEEEEEEEEEEEECCCTTC-HHHHHT
T ss_pred cccCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEE--C--CCCccccEEEEEEcCCCeEEEEeCEEEECCCCcc-hHHHHc
Confidence 4566788999999999999999999999999988 6 34 677776655 5799999999999998 455555
Q ss_pred cCCccceeEEEEEEEEEEecCCCCCccccCCCC-CeEEEcCCCceEecCCCCCCCcEEEecCCCCCCCCCCCCCCCchhH
Q 015088 221 TGLELPIQAVETTVCYWRIKEGNEADYAVGGDF-PSFASYGDPYIYGTPSLEYPGLIKIALHGGYPCDPDRRPWGPGLLL 299 (413)
Q Consensus 221 ~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~y~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (413)
|+..+..+.....+.+....... .+...... -.+........++.|......+...... +++..+....-..
T Consensus 190 -gi~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~p~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 262 (535)
T 3ihg_A 190 -GIGRYGHGTLTHMVGVIFDADLS-GIMEPGTTGWYYLHHPEFKGTFGPTDRPDRHTLFVEY-----DPDEGERPEDFTP 262 (535)
T ss_dssp -TCCEEEEEEEEEEEEEEEECCGG-GTSCTTCCEEEEEECSSCEEEEEECSSTTEEEEEEEE-----CTTTTCCGGGCCH
T ss_pred -CCCcCCCCccceEEEEEEeccCh-hhccCCceEEEEEECCCceEEEEEecCCCEEEEEEee-----CccccCccccCCH
Confidence 77666555544444333323211 11111101 1122222223344444332222221111 1111000001024
Q ss_pred HHHHHHHHhhcCCCCCCCCCeeeceeee--------eecCCCCeEecCCCCCCCCCEEEEeCCCCCCCccchHHHHHHHH
Q 015088 300 DSLKEWIQGRFAGRVDSNGPVATQLCMY--------SITPDEDFVIDFLGGEFGEDVVVAGGFSGHGFKMAPAVGRILAD 371 (413)
Q Consensus 300 ~~l~~~~~~~~p~~~~~~~~~~~~~g~~--------~~t~d~~p~ig~~~~~~~~~~~~~~G~~~~G~~~a~~~a~~la~ 371 (413)
+.+.+.+.+.++.... .....+.... .+..++..++|.. .+...-++|.|+.++..-|..|+.
T Consensus 263 e~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~a~~~~~grv~LvGDA-------AH~~~P~~GqG~n~ai~DA~~La~ 333 (535)
T 3ihg_A 263 QRCVELIGLALDAPEV--KPELVDIQGWEMAARIAERWREGRVFLAGDA-------AKVTPPTGGMSGNAAVADGFDLAW 333 (535)
T ss_dssp HHHHHHHHHHHTCSSC--CCEEEEEEEEEEEEEEESCSEETTEEECTTT-------TEECCSTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCC--ceeEEEeeEeeeeEEEECccccCCEEEEecc-------cccCCCccCCccccccccHHHHHH
Confidence 4566666666653221 1111122211 1233455555543 456667788888877766666655
Q ss_pred HHh---cCCCCcccccccccccc
Q 015088 372 LVL---SGEAQGVELQHFRISRF 391 (413)
Q Consensus 372 ~i~---~g~~~~~~~~~~~~~R~ 391 (413)
.|. ++......++.|+-+|.
T Consensus 334 ~La~~l~g~~~~~lL~~Ye~eR~ 356 (535)
T 3ihg_A 334 KLAAVLQGQAGAGLLDTYEDERK 356 (535)
T ss_dssp HHHHHHTTSSCTTHHHHHHHHHH
T ss_pred HHHHHhcCCCcHHHHHhhHHHHH
Confidence 443 24433445666665554
No 21
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.75 E-value=2e-17 Score=156.74 Aligned_cols=209 Identities=11% Similarity=0.014 Sum_probs=119.0
Q ss_pred ceeChHHHHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcCCCc--EEEcCEEEEcCCCChHHhhhhhcCCcc
Q 015088 148 GVIKPTKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGE--KFWGKKCVVTAGAWVGKLVKRITGLEL 225 (413)
Q Consensus 148 ~~~~~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~--~i~ad~VV~A~G~~s~~l~~~~~g~~~ 225 (413)
..+++..+.+.|.+.+++.|++++++++|+++.. ++++..+.+.+.+|+ +++||.||.|+|.++ .+.+.+ +...
T Consensus 101 ~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~--~~~~~~v~v~~~~g~~~~~~a~~vV~A~G~~s-~l~~~~-g~~~ 176 (421)
T 3nix_A 101 WQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKF--FGTDSVTTIEDINGNKREIEARFIIDASGYGR-VIPRMF-GLDK 176 (421)
T ss_dssp EECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEE--ETTEEEEEEEETTSCEEEEEEEEEEECCGGGC-HHHHHT-TCEE
T ss_pred eEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEE--eCCEEEEEEEcCCCCEEEEEcCEEEECCCCch-hhHHhc-CCCC
Confidence 5678899999999999999999999999999988 633334677778887 799999999999987 444444 7666
Q ss_pred ceeEEEEEEEEEEecCCCC-CccccCCCCCeEEE--cCCCceEecCCCCCCCcEEEecCCCCCCCCCCCCCCCchhHHHH
Q 015088 226 PIQAVETTVCYWRIKEGNE-ADYAVGGDFPSFAS--YGDPYIYGTPSLEYPGLIKIALHGGYPCDPDRRPWGPGLLLDSL 302 (413)
Q Consensus 226 ~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~y~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 302 (413)
+........+...+..... ..+.. ........ ....++|.+|..+ +.+.++.......... .. . ..+.+
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~P~~~--~~~~vg~~~~~~~~~~-~~---~-~~~~~ 248 (421)
T 3nix_A 177 PSGFESRRTLFTHIKDVKRPVAAEM-EGNRITAVVHKPKVWIWVIPFSN--GNTSVGFVGEPSYFDE-YT---G-TPEER 248 (421)
T ss_dssp CCSSCCCEEEEEEEECTTCCC-----CCSEEEEEEEETTEEEEEEECTT--SEEEEEEEECHHHHTT-SC---S-CHHHH
T ss_pred CCcCCCcEEEEEEECCCcCCCccCC-CCeEEEEEeCCCCEEEEEEEECC--CCEEEEEEecHHHhhh-cC---C-CHHHH
Confidence 5544444444444333211 11111 11222221 2334567777654 3332222110000000 00 0 12233
Q ss_pred HHHHHhhcCCCC----CC--CCCeeecee----eeeecCCCCeEecCCCCCCCCCEEEEeCCCCCCCccchHHHHHHHHH
Q 015088 303 KEWIQGRFAGRV----DS--NGPVATQLC----MYSITPDEDFVIDFLGGEFGEDVVVAGGFSGHGFKMAPAVGRILADL 372 (413)
Q Consensus 303 ~~~~~~~~p~~~----~~--~~~~~~~~g----~~~~t~d~~p~ig~~~~~~~~~~~~~~G~~~~G~~~a~~~a~~la~~ 372 (413)
.+.+.+..|.+. +. ...+..+.+ ...+..++.+++|...+ ....+.|.|+.+|...|..+|+.
T Consensus 249 l~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAa~-------~~~P~~G~G~~~A~~~a~~la~~ 321 (421)
T 3nix_A 249 MRAMIANEGHIAERFKSEEFLFEPRTIEGYAISASKLYGDGFVLTGNATE-------FLDPIFSSGATFAMESGSKGGKL 321 (421)
T ss_dssp HHHHHHTCTTTHHHHTTCCBSSCCEEEECCCBEESCSEETTEEECGGGTC-------BCCSTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCcHHHHHHhcCccccCceeecccceeeeeeccCCEEEeccccc-------ccCCcccccHHHHHHHHHHHHHH
Confidence 334334455432 11 011122211 22345577788886543 34567899999999999999988
Q ss_pred Hhc
Q 015088 373 VLS 375 (413)
Q Consensus 373 i~~ 375 (413)
|..
T Consensus 322 l~~ 324 (421)
T 3nix_A 322 AVQ 324 (421)
T ss_dssp HHH
T ss_pred HHH
Confidence 863
No 22
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.72 E-value=3.6e-17 Score=153.67 Aligned_cols=287 Identities=18% Similarity=0.174 Sum_probs=150.1
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCcccCCCceeecccCCCChHHHHHHHHHHHHHHHHHhCCe-
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESRTIRATYPEDYYHPMVLESCLLWEQAQSEIGYK- 85 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~gg~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~- 85 (413)
++||+|||||++|+++|+.|+++|++|+|||+....+.... .++.+. . ++.+.+++.
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~---~~~~~~--------~-----------~~~~~lg~~~ 61 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVR---CGEGLS--------K-----------GILNEADIKA 61 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCC---SCCEEE--------T-----------HHHHHTTCCC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcc---cccccC--------H-----------HHHHHcCCCC
Confidence 58999999999999999999999999999999876532111 111111 0 011122210
Q ss_pred ---e-EEeeceeeeCCCChhhHHHHHHHHhhCCCCccccCHHHHHHHcCCcccCCCCeEEEEecCCceeChHHHHHHHHH
Q 015088 86 ---V-YFKAHQFDMGPSENKSLRSVIASCRKNSVPHQVLDCRQVLEKYSGRIEIPENWVGVATELGGVIKPTKAVSMFQT 161 (413)
Q Consensus 86 ---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 161 (413)
. ......+.+.... +.....+.. . ....+....++...+.+.|.+
T Consensus 62 ~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~-------------~----~~~~~~~~~~~~~~l~~~L~~ 110 (397)
T 3cgv_A 62 DRSFIANEVKGARIYGPS--------------EKRPIILQS-------------E----KAGNEVGYVLERDKFDKHLAA 110 (397)
T ss_dssp CTTTEEEEESEEEEECTT--------------CSSCEEEC----------------------CCCEEEECHHHHHHHHHH
T ss_pred ChHHhhhhcceEEEEcCC--------------CCEEEEEec-------------c----ccCCceeEEEeHHHHHHHHHH
Confidence 0 0111111111000 000000000 0 000122356788899999999
Q ss_pred HHHHCCCEEEcCceEEEEEEecccCCCeEE-EEc---CCCcEEEcCEEEEcCCCChHHhhhhhcCCcc-ce---eEEEEE
Q 015088 162 LAIKNGAVLRDNMEVKTVLKVKDAVKGGVT-VVT---SNGEKFWGKKCVVTAGAWVGKLVKRITGLEL-PI---QAVETT 233 (413)
Q Consensus 162 ~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~-v~~---~~g~~i~ad~VV~A~G~~s~~l~~~~~g~~~-~~---~~~~g~ 233 (413)
.+++.|++++++++|+++.. + ++.+. |.+ .++.+++||.||.|+|.++ .+.+.+ +... +. ....+.
T Consensus 111 ~~~~~gv~i~~~~~v~~i~~--~--~~~v~gv~~~~~~~~~~~~a~~vV~A~G~~s-~~~~~~-g~~~~~~~~~~~~~~~ 184 (397)
T 3cgv_A 111 LAAKAGADVWVKSPALGVIK--E--NGKVAGAKIRHNNEIVDVRAKMVIAADGFES-EFGRWA-GLKSVILARNDIISAL 184 (397)
T ss_dssp HHHHHTCEEESSCCEEEEEE--E--TTEEEEEEEEETTEEEEEEEEEEEECCCTTC-HHHHHH-TCCTTCCCGGGEEEEE
T ss_pred HHHhCCCEEEECCEEEEEEE--e--CCEEEEEEEEECCeEEEEEcCEEEECCCcch-HhHHhc-CCCccCCChhheeEEE
Confidence 99999999999999999988 6 34443 554 3455799999999999998 455554 6555 22 112222
Q ss_pred EEEEEecCCCCCccccCCCCCeEEE--cCCCceEecCCCCCCCcEEEecCCCCCCCCCCCCCCCchhHHHHHHHHHhhcC
Q 015088 234 VCYWRIKEGNEADYAVGGDFPSFAS--YGDPYIYGTPSLEYPGLIKIALHGGYPCDPDRRPWGPGLLLDSLKEWIQGRFA 311 (413)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~y~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p 311 (413)
. +.++... +.+ .....+.. ....+.|..|..+ +.+.++... ..+.. .......+.+.+.+. .+|
T Consensus 185 ~--~~~~~~~---~~~-~~~~~~~~~~~~~g~~~~~P~~~--~~~~vg~~~----~~~~~-~~~~~~~~~l~~~~~-~~~ 250 (397)
T 3cgv_A 185 Q--YRMINVD---VDP-DYTDFYLGSIAPAGYIWVFPKGE--GMANVGIGS----SINWI-HNRFELKNYLDRFIE-NHP 250 (397)
T ss_dssp E--EEEESCC---CCT-TEEEEECSTTSTTEEEEEEEEET--TEEEEEEEE----ETTTC-SCHHHHHHHHHHHHH-TCH
T ss_pred E--EEeccCC---CCC-CcEEEEeCCcCCCceEEEEECCC--CeEEEEEEe----ccccc-cCCCCHHHHHHHHHH-hCc
Confidence 1 1222211 111 00111111 1234466777644 322222110 00000 011112333333333 334
Q ss_pred CCCCCCCCeeeceeeeeec-------CCCCeEecCCCCCCCCCEEEEeCCCCCCCccchHHHHHHHHHHh
Q 015088 312 GRVDSNGPVATQLCMYSIT-------PDEDFVIDFLGGEFGEDVVVAGGFSGHGFKMAPAVGRILADLVL 374 (413)
Q Consensus 312 ~~~~~~~~~~~~~g~~~~t-------~d~~p~ig~~~~~~~~~~~~~~G~~~~G~~~a~~~a~~la~~i~ 374 (413)
.+... ++...|.+..|.+ .++..++|.. .+....++|.|+.+|...|..+|+.|.
T Consensus 251 ~~~~~-~~~~~~~~~~p~~~~~~~~~~~~v~liGDA-------a~~~~P~~G~G~~~a~~~a~~la~~l~ 312 (397)
T 3cgv_A 251 GLKKG-QDIQLVTGGVSVSKVKMPITMPGLMLVGDA-------ARLIDPITGGGIANAIVSGMYAAQVTK 312 (397)
T ss_dssp HHHTS-EEEEEEEEEEECCCCCSCCEETTEEECGGG-------GTCSCTTTCCCHHHHHHHHHHHHHHHH
T ss_pred CCCCC-eEEeeeeeeeecCCCccceeeCCEEEEEcc-------ccCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 33332 4566777777653 2333344432 223356789999999998888877665
No 23
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.70 E-value=4.8e-16 Score=149.36 Aligned_cols=207 Identities=14% Similarity=0.063 Sum_probs=106.9
Q ss_pred HHHHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCChH-HhhhhhcCC-----ccc
Q 015088 153 TKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWVG-KLVKRITGL-----ELP 226 (413)
Q Consensus 153 ~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s~-~l~~~~~g~-----~~~ 226 (413)
..+.+.|.+.+.+ ++|+++++|++|.. + ++++.|++.+|++++||+||+|++.+.. .++... .. .++
T Consensus 235 ~~l~~~l~~~l~~--~~i~~~~~V~~i~~--~--~~~~~v~~~~g~~~~ad~vi~a~p~~~~~~l~~~~-~~~~~~~~~~ 307 (470)
T 3i6d_A 235 QTLVEEIEKQLKL--TKVYKGTKVTKLSH--S--GSCYSLELDNGVTLDADSVIVTAPHKAAAGMLSEL-PAISHLKNMH 307 (470)
T ss_dssp HHHHHHHHHTCCS--EEEECSCCEEEEEE--C--SSSEEEEESSSCEEEESEEEECSCHHHHHHHTTTS-TTHHHHHTCE
T ss_pred HHHHHHHHHhcCC--CEEEeCCceEEEEE--c--CCeEEEEECCCCEEECCEEEECCCHHHHHHHcCCc-hhhHHHhcCC
Confidence 3455555443322 69999999999988 6 4568999999977999999999998652 332211 11 123
Q ss_pred eeEEEEEEEEEEecCC-CCCccccCCCCCeEEEcCCC-ce----Ee---cC--CCCCCCcEEEecCCCCCCCCCCCCCCC
Q 015088 227 IQAVETTVCYWRIKEG-NEADYAVGGDFPSFASYGDP-YI----YG---TP--SLEYPGLIKIALHGGYPCDPDRRPWGP 295 (413)
Q Consensus 227 ~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~----y~---~p--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (413)
..++....+.++ .. ..... ..+-.+...... .+ +. .| .++... +..+...+ .........+.
T Consensus 308 ~~~~~~v~l~~~--~~~~~~~~---~~~g~l~~~~~~~~~~~~~~~s~~~~~~~p~~~~-~l~~~~~~-~~~~~~~~~~~ 380 (470)
T 3i6d_A 308 STSVANVALGFP--EGSVQMEH---EGTGFVISRNSDFAITACTWTNKKWPHAAPEGKT-LLRAYVGK-AGDESIVDLSD 380 (470)
T ss_dssp EEEEEEEEEEES--STTCCCSS---CSSEEEECSTTCCSEEEEEEHHHHCGGGSCTTCE-EEEEEECC-SSCCGGGTSCH
T ss_pred CCceEEEEEEEC--chhcCCCC---CCeEEEccCCCCCCceEEEEEcCcCCCcCCCCCE-EEEEEECC-CCCccccCCCH
Confidence 334333333332 21 11110 001111111111 00 00 01 111112 22121111 11111112223
Q ss_pred chhHHHHHHHHHhhcCCCCCCCC--Ceeeceeeee-ecCCCCeEecCCCC---CCCCCEEEEeC-CCCCCCccchHHHHH
Q 015088 296 GLLLDSLKEWIQGRFAGRVDSNG--PVATQLCMYS-ITPDEDFVIDFLGG---EFGEDVVVAGG-FSGHGFKMAPAVGRI 368 (413)
Q Consensus 296 ~~~~~~l~~~~~~~~p~~~~~~~--~~~~~~g~~~-~t~d~~p~ig~~~~---~~~~~~~~~~G-~~~~G~~~a~~~a~~ 368 (413)
++..+.+++.+.+++|...+. . .+..|..-.| ++++..+.+..... .+.++||+++. ++|.|+..+...|+.
T Consensus 381 ~~~~~~~~~~l~~~~g~~~~p-~~~~~~~w~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~~aG~~~~g~gv~~a~~sG~~ 459 (470)
T 3i6d_A 381 NDIINIVLEDLKKVMNINGEP-EMTCVTRWHESMPQYHVGHKQRIKELREALASAYPGVYMTGASFEGVGIPDCIDQGKA 459 (470)
T ss_dssp HHHHHHHHHHHGGGSCCCSCC-SEEEEEEEEEEEEECBTTHHHHHHHHHHHHHHHSTTEEECSTTTSCCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCCc-eEEEEEEcCCccCCCCCCHHHHHHHHHHHHHhhCCCEEEEeecCCCCCHHHHHHHHHH
Confidence 347788888899999864421 1 2345665444 55554322211100 01168998888 677788889999999
Q ss_pred HHHHHh
Q 015088 369 LADLVL 374 (413)
Q Consensus 369 la~~i~ 374 (413)
+|+.|+
T Consensus 460 aA~~i~ 465 (470)
T 3i6d_A 460 AVSDAL 465 (470)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998886
No 24
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.69 E-value=2.4e-16 Score=153.77 Aligned_cols=221 Identities=13% Similarity=0.068 Sum_probs=119.9
Q ss_pred ceeChHHHHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEc--CCC-cEEEcCEEEEcCCCChHHhhhhhcCCc
Q 015088 148 GVIKPTKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVT--SNG-EKFWGKKCVVTAGAWVGKLVKRITGLE 224 (413)
Q Consensus 148 ~~~~~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~--~~g-~~i~ad~VV~A~G~~s~~l~~~~~g~~ 224 (413)
..++...+.+.|.+.+++.|++|+++++|++++. + ++.+.|++ .+| ++++||+||.|+|.+| .+-+.+ |+.
T Consensus 143 ~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~--~--~~~v~v~~~~~~G~~~~~a~~vV~ADG~~S-~vR~~l-Gi~ 216 (570)
T 3fmw_A 143 GLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQ--D--AEAVEVTVAGPSGPYPVRARYGVGCDGGRS-TVRRLA-ADR 216 (570)
T ss_dssp BCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCB--C--SSCEEEEEEETTEEEEEEESEEEECSCSSC-HHHHHT-TCC
T ss_pred EEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEE--c--CCeEEEEEEeCCCcEEEEeCEEEEcCCCCc-hHHHHc-CCC
Confidence 4577888999999999989999999999999987 6 35566665 778 5799999999999998 444444 777
Q ss_pred cceeEEEEEEEEEEecCCCCCccccCCCCCeEEEcCCCceEe-cCCCCCCC-cEEEecCCCCCCCCCCCCCCCchhHHHH
Q 015088 225 LPIQAVETTVCYWRIKEGNEADYAVGGDFPSFASYGDPYIYG-TPSLEYPG-LIKIALHGGYPCDPDRRPWGPGLLLDSL 302 (413)
Q Consensus 225 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~-~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l 302 (413)
.+..+.....+...+...... . . +. +.......+++ .|..+..- .+.+...... +. ........+.+
T Consensus 217 ~~~~~~~~~~~~~~v~~~~~~-~-~---~~-~~~~~~G~~~~~~P~~~g~~~~i~~~~~~~~---~~--~~~~~~~~~~~ 285 (570)
T 3fmw_A 217 FPGTEATVRALIGYVTTPERE-V-P---RR-WERTPDGILVLAFPPEGGLGPGWSSSSTGHS---PA--ADEGPVTLEDL 285 (570)
T ss_dssp CCCCCCCEEEEEEECCCCSCS-S-C---CC-CCCCCSSCEEECCCC------CEEEEEESCC----------CCCCHHHH
T ss_pred CccceeeeEEEEEEEEecCCC-c-c---eE-EEecCCEEEEEEeecCCCeEEEEEEEeCCCC---cc--ccccCCCHHHH
Confidence 665555555444443221111 0 0 00 00111222333 46544211 1222211110 00 00011145677
Q ss_pred HHHHHhhcCCCCCCCCCeeeceeeee--------ecCCCCeEecCCCCCCCCCEEEEeCCCCCCCccchHHHHHHHHHHh
Q 015088 303 KEWIQGRFAGRVDSNGPVATQLCMYS--------ITPDEDFVIDFLGGEFGEDVVVAGGFSGHGFKMAPAVGRILADLVL 374 (413)
Q Consensus 303 ~~~~~~~~p~~~~~~~~~~~~~g~~~--------~t~d~~p~ig~~~~~~~~~~~~~~G~~~~G~~~a~~~a~~la~~i~ 374 (413)
.+.+.+.++....... ...|...++ +..++..++|. -.+...-++|+|+.++..-|..|+..|.
T Consensus 286 ~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~grv~LvGD-------AAH~~~P~~GqG~n~gl~DA~~La~~La 357 (570)
T 3fmw_A 286 GAAVARVRGTPLTLTE-PVSWLSRFGDASRQAKRYRSGRVLLAGD-------AAHVHFPIGGQGLNTGLQDAVNLGWKLA 357 (570)
T ss_dssp HHHTTSSSSCCCCCCS-CCEEEEEECCCCEECSCSEETTEEECGG-------GTEECCCCSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhcccccce-eeeeeEEeecccccccccccCCEEEEEe-------cceecCCCcCcCHhHHHHHHHHHHHHHH
Confidence 7777777774432211 111433332 12233344443 3355566778888887766666555443
Q ss_pred ---cCCCCcccccccccccccc
Q 015088 375 ---SGEAQGVELQHFRISRFKE 393 (413)
Q Consensus 375 ---~g~~~~~~~~~~~~~R~~~ 393 (413)
.+......++.|.-+|...
T Consensus 358 ~~~~g~~~~~lL~~Ye~eR~~~ 379 (570)
T 3fmw_A 358 ARVRGWGSEELLDTYHDERHPV 379 (570)
T ss_dssp HHHHSCCCHHHHHHHHHHHHHH
T ss_pred HHHcCCCcHHHHHHHHHHHHHH
Confidence 2433344467776666443
No 25
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.68 E-value=3.3e-16 Score=153.10 Aligned_cols=210 Identities=11% Similarity=0.032 Sum_probs=115.3
Q ss_pred CceeChHHHHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcC-CC--cEEEcCEEEEcCCCChHHhhhhhcCC
Q 015088 147 GGVIKPTKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTS-NG--EKFWGKKCVVTAGAWVGKLVKRITGL 223 (413)
Q Consensus 147 ~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~-~g--~~i~ad~VV~A~G~~s~~l~~~~~g~ 223 (413)
...++...+.+.|.+.+++.|++++++++|+++.. ++ +..+.|.+. +| .+++||.||.|+|.++. +.+.+ +.
T Consensus 122 ~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~--~~-g~~~~V~~~~~G~~~~i~AdlVV~AdG~~S~-lr~~l-g~ 196 (591)
T 3i3l_A 122 AVQVKREEFDKLLLDEARSRGITVHEETPVTDVDL--SD-PDRVVLTVRRGGESVTVESDFVIDAGGSGGP-ISRKL-GV 196 (591)
T ss_dssp EEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEC--CS-TTCEEEEEEETTEEEEEEESEEEECCGGGCH-HHHHH-TC
T ss_pred eEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEE--cC-CCEEEEEEecCCceEEEEcCEEEECCCCcch-hHHHc-CC
Confidence 45678889999999999999999999999999987 52 356777765 66 47999999999999873 44444 65
Q ss_pred ccceeEEEEEEEEEEecCCCCCccccCCCCCeEEEcCCCceEecCCCCCCCcEEEecCCCCCCCCCCCCCCCchhHHHHH
Q 015088 224 ELPIQAVETTVCYWRIKEGNEADYAVGGDFPSFASYGDPYIYGTPSLEYPGLIKIALHGGYPCDPDRRPWGPGLLLDSLK 303 (413)
Q Consensus 224 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 303 (413)
..+....+...++........... +..............+|..|..+ +.+.++... +++..+.......+.+.
T Consensus 197 ~~~~~~~~~~av~~~~~~~~~~~~-~~~~~~~~~~~~~G~~w~iPl~~--~~~sv~~~~----~~~~~~~l~~~~~~~~~ 269 (591)
T 3i3l_A 197 RQYDEFYRNFAVWSYFKLKDPFEG-DLKGTTYSITFEDGWVWMIPIKD--DLYSVGLVV----DRSKSAEVREQGADAFY 269 (591)
T ss_dssp EEEEEEEEEEEEEEEEECCCSCCS-TTTTCEEEEEETTEEEEEEECSS--SEEEEEEEE----EGGGHHHHHHHCHHHHH
T ss_pred CCCCccccceEEEEEEecCccccC-CCCCceEEEEcCCcEEEEEECCC--CeEEEEEEc----CHHHHhhhccCCHHHHH
Confidence 443333333333322211110000 00001112222344567777653 333222210 00000000000112233
Q ss_pred HHHHhhcCCC----CC-----CCCCeeecee-eeeecCCCCeEecCCCCCCCCCEEEEeCCCCCCCccchHHHHHHHHHH
Q 015088 304 EWIQGRFAGR----VD-----SNGPVATQLC-MYSITPDEDFVIDFLGGEFGEDVVVAGGFSGHGFKMAPAVGRILADLV 373 (413)
Q Consensus 304 ~~~~~~~p~~----~~-----~~~~~~~~~g-~~~~t~d~~p~ig~~~~~~~~~~~~~~G~~~~G~~~a~~~a~~la~~i 373 (413)
+.+...+|.+ .. ....+..|.+ ...+..++..+||...+ ....+.|.|+.+|...|..+|+.|
T Consensus 270 ~~l~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~rvvLIGDAAh-------~~~Pl~GqGinlAl~dA~~LA~~L 342 (591)
T 3i3l_A 270 SSTLAKCAKAMDILGGAEQVDEVRIVQDWSYDTEVFSADRFFLCGDAAC-------FTDPLFSQGVHLASQSAVSAAAAI 342 (591)
T ss_dssp HHHHTTCHHHHHHHTTCEECSCCEEEEEEEEEESCSEETTEEECGGGTC-------BCCGGGCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCHHHHHHHhcCccccCceEecccccchhhcccCCEEEEccccc-------cCCCcccccHHHHHHHHHHHHHHH
Confidence 3332222221 10 0122334554 23455677788886543 345678899999999988888877
Q ss_pred hc
Q 015088 374 LS 375 (413)
Q Consensus 374 ~~ 375 (413)
..
T Consensus 343 ~~ 344 (591)
T 3i3l_A 343 DR 344 (591)
T ss_dssp HH
T ss_pred HH
Confidence 63
No 26
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.67 E-value=9.3e-15 Score=140.71 Aligned_cols=304 Identities=16% Similarity=0.138 Sum_probs=158.2
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCcccCCCceeecccCCCChHHHHHHHHHHHHHHHHHhCC
Q 015088 5 GEKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESRTIRATYPEDYYHPMVLESCLLWEQAQSEIGY 84 (413)
Q Consensus 5 ~~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~gg~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 84 (413)
+.++||+|||||++|+++|+.|+++|++|+|||+.......+. +..+ ...+++.++++ |+
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r----~~~l------------~~~~~~~l~~l----Gl 69 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESR----GLGF------------TARTMEVFDQR----GI 69 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCC----SEEE------------CHHHHHHHHHT----TC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCc----eeEE------------CHHHHHHHHHC----CC
Confidence 4579999999999999999999999999999999865532111 1111 11222322221 21
Q ss_pred ee-EE---eeceeeeCCCChhhHHHHHHHHhhCCCCccccCHHHHHHHcCCcccCCCCeEEEEecCCceeChHHHHHHHH
Q 015088 85 KV-YF---KAHQFDMGPSENKSLRSVIASCRKNSVPHQVLDCRQVLEKYSGRIEIPENWVGVATELGGVIKPTKAVSMFQ 160 (413)
Q Consensus 85 ~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 160 (413)
.- +. ......+ .+.. ++... . .... +....++...+.+.|.
T Consensus 70 ~~~~~~~~~~~~~~~-----------------~~~~---~~~~~----~------~~~~-----~~~~~i~~~~l~~~L~ 114 (499)
T 2qa2_A 70 LPAFGPVETSTQGHF-----------------GGRP---VDFGV----L------EGAH-----YGVKAVPQSTTESVLE 114 (499)
T ss_dssp GGGGCSCCEESEEEE-----------------TTEE---EEGGG----S------TTCC-----CEEEEEEHHHHHHHHH
T ss_pred HHHHHhcccccccee-----------------ccee---ccccc----C------CCCC-----CceEecCHHHHHHHHH
Confidence 00 00 0000000 0000 00000 0 0000 1123456678899999
Q ss_pred HHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcCCCc---EEEcCEEEEcCCCChHHhhhhhcCCccceeEEEEEEEEE
Q 015088 161 TLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGE---KFWGKKCVVTAGAWVGKLVKRITGLELPIQAVETTVCYW 237 (413)
Q Consensus 161 ~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~---~i~ad~VV~A~G~~s~~l~~~~~g~~~~~~~~~g~~~~~ 237 (413)
+.+.+.|++|+++++|++++. + ++.+.+++.++. +++||+||.|+|.+|. +-+.+ |+..+-.......+..
T Consensus 115 ~~~~~~gv~v~~~~~v~~i~~--~--~~~v~v~~~~~~g~~~~~a~~vVgADG~~S~-VR~~l-g~~~~~~~~~~~~~~~ 188 (499)
T 2qa2_A 115 EWALGRGAELLRGHTVRALTD--E--GDHVVVEVEGPDGPRSLTTRYVVGCDGGRST-VRKAA-GFDFPGTSASREMFLA 188 (499)
T ss_dssp HHHHHTTCEEEESCEEEEEEE--C--SSCEEEEEECSSCEEEEEEEEEEECCCTTCH-HHHHT-TCCCCEECCCCCEEEE
T ss_pred HHHHhCCCEEEcCCEEEEEEE--e--CCEEEEEEEcCCCcEEEEeCEEEEccCcccH-HHHHc-CCCCCCCCCccEEEEE
Confidence 999999999999999999988 6 356777766653 6999999999999984 43444 6655443322222222
Q ss_pred EecCCCCCccccCCCCCeEEEcCCCceEecCCCCCCCcEEEec--CCCCCCCCCCCCCCCchhHHHHHHHHHhhcCCCCC
Q 015088 238 RIKEGNEADYAVGGDFPSFASYGDPYIYGTPSLEYPGLIKIAL--HGGYPCDPDRRPWGPGLLLDSLKEWIQGRFAGRVD 315 (413)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~p~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~ 315 (413)
.+.... . + ..+ .+....+..+++.|..+ +.+.+.. ..... . +.......+.+.+.+.+.++....
T Consensus 189 ~v~~~~---~-~-~~~-~~~~~~~g~~~~~P~~~--g~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~l~~~~~~~~~ 255 (499)
T 2qa2_A 189 DIRGCE---I-T-PRP-IGETVPLGMVMSAPLGD--GVDRIIVCERGAPA---R--RRTGPPPYQEVAAAWQRLTGQDIS 255 (499)
T ss_dssp EEESCC---C-C-CEE-EEEEETTEEEEEEECSS--SCEEEEEEETTCCC---C--CCSSSCCHHHHHHHHHHHHSCCCT
T ss_pred EEEECC---C-C-cce-EEEECCCeEEEEEEcCC--CEEEEEEEecCCCC---c--cccCCCCHHHHHHHHHHHhCCCCC
Confidence 221110 0 1 001 11222233456666643 3332221 11110 0 000111355666777777663221
Q ss_pred CCCCeeeceeeee--------ecCCCCeEecCCCCCCCCCEEEEeCCCCCCCccchHHHHHH----HHHHhcCCCCcccc
Q 015088 316 SNGPVATQLCMYS--------ITPDEDFVIDFLGGEFGEDVVVAGGFSGHGFKMAPAVGRIL----ADLVLSGEAQGVEL 383 (413)
Q Consensus 316 ~~~~~~~~~g~~~--------~t~d~~p~ig~~~~~~~~~~~~~~G~~~~G~~~a~~~a~~l----a~~i~~g~~~~~~~ 383 (413)
. ... .|...++ +..++..++|. -.+...-++|.|+.++..-|..| +..+. |......+
T Consensus 256 ~-~~~-~~~~~~~~~~~~a~~~~~grv~L~GD-------AAH~~~P~~GqG~n~gi~DA~~La~~La~~l~-g~~~~~~L 325 (499)
T 2qa2_A 256 H-GEP-VWVSAFGDPARQVSAYRRGRVLLAGD-------SAHVHLPAGGQGMNVSVQDSVNLGWKLAAVVS-GRAPAGLL 325 (499)
T ss_dssp T-CEE-EEEEEECCCEEECSCSEETTEEECGG-------GTEEECCCSSCHHHHHHHHHHHHHHHHHHHHT-TSSCTHHH
T ss_pred c-cce-eEEEEEeCCcEEcccccCCCEEEEec-------ccccCCCccccchhhhHHHHHHHHHHHHHHHc-CCCChHHH
Confidence 1 111 2332221 12233444443 34566778899988877666555 44443 54434457
Q ss_pred ccccccccc
Q 015088 384 QHFRISRFK 392 (413)
Q Consensus 384 ~~~~~~R~~ 392 (413)
+.|+-+|..
T Consensus 326 ~~Ye~eR~~ 334 (499)
T 2qa2_A 326 DTYHEERHP 334 (499)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 777776654
No 27
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.67 E-value=1.2e-15 Score=144.70 Aligned_cols=60 Identities=15% Similarity=0.247 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEE-EEcCCCcEEEcCEEEEcCCCChH-Hhh
Q 015088 153 TKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVT-VVTSNGEKFWGKKCVVTAGAWVG-KLV 217 (413)
Q Consensus 153 ~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~-v~~~~g~~i~ad~VV~A~G~~s~-~l~ 217 (413)
..+.+.|.+.++++|++|+++++|++|.. + ++.+. |.++ |++++||.||+|++.+.. .++
T Consensus 196 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~--~--~~~~~gv~~~-g~~~~ad~VV~a~~~~~~~~ll 257 (425)
T 3ka7_A 196 KGIIDALETVISANGGKIHTGQEVSKILI--E--NGKAAGIIAD-DRIHDADLVISNLGHAATAVLC 257 (425)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEE--E--TTEEEEEEET-TEEEECSEEEECSCHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCEEEECCceeEEEE--E--CCEEEEEEEC-CEEEECCEEEECCCHHHHHHhc
Confidence 67889999999999999999999999988 6 34444 6665 667999999999999764 444
No 28
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.67 E-value=5.9e-16 Score=145.83 Aligned_cols=161 Identities=16% Similarity=0.146 Sum_probs=94.1
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCcccCCCceeecccCCCChHHHHHHHHHHHHHHHHHhCCe
Q 015088 6 EKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESRTIRATYPEDYYHPMVLESCLLWEQAQSEIGYK 85 (413)
Q Consensus 6 ~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~gg~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 85 (413)
.++||+|||||++|+++|+.|+++|++|+|||+.......+... .+. +.... .......+..+... +..
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~~~~----~l~-----~~~~~-~l~~lg~~~~~~~~-~~~ 90 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKPVGAAI----SVW-----PNGVK-CMAHLGMGDIMETF-GGP 90 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC----CEE----EEC-----HHHHH-HHHHTTCHHHHHHH-SCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcCeeE----EEC-----HHHHH-HHHHCCCHHHHHhh-cCC
Confidence 46899999999999999999999999999999986542211110 000 00000 00111112222221 100
Q ss_pred eEEeeceeeeCCCChhhHHHHHHHHhhCCCCccccCHHHHHHHcCCcccCCCCeEEEEecCCceeChHHHHHHHHHHHHH
Q 015088 86 VYFKAHQFDMGPSENKSLRSVIASCRKNSVPHQVLDCRQVLEKYSGRIEIPENWVGVATELGGVIKPTKAVSMFQTLAIK 165 (413)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 165 (413)
. ..+.+.... .+.....++..+.....+ .....++...+.+.|.+.+.+
T Consensus 91 ~----~~~~~~~~~-------------~g~~~~~~~~~~~~~~~~--------------~~~~~i~r~~l~~~L~~~~~~ 139 (407)
T 3rp8_A 91 L----RRMAYRDFR-------------SGENMTQFSLAPLIERTG--------------SRPCPVSRAELQREMLDYWGR 139 (407)
T ss_dssp C----CEEEEEETT-------------TCCEEEEEECHHHHHHHS--------------SCCEEEEHHHHHHHHHHHHCG
T ss_pred C----cceEEEECC-------------CCCEeEEecchhhhhhcC--------------CceEEEEHHHHHHHHHHhCCc
Confidence 0 000000000 000001111111111111 123456778888899888876
Q ss_pred CCCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCChH
Q 015088 166 NGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWVG 214 (413)
Q Consensus 166 ~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s~ 214 (413)
++|+++++|++++. + ++.+.|++.+|++++||.||.|+|.+|.
T Consensus 140 --~~i~~~~~v~~i~~--~--~~~v~v~~~~g~~~~a~~vV~AdG~~S~ 182 (407)
T 3rp8_A 140 --DSVQFGKRVTRCEE--D--ADGVTVWFTDGSSASGDLLIAADGSHSA 182 (407)
T ss_dssp --GGEEESCCEEEEEE--E--TTEEEEEETTSCEEEESEEEECCCTTCS
T ss_pred --CEEEECCEEEEEEe--c--CCcEEEEEcCCCEEeeCEEEECCCcChH
Confidence 89999999999988 6 4678899999988999999999999874
No 29
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.67 E-value=1.1e-14 Score=140.17 Aligned_cols=310 Identities=16% Similarity=0.163 Sum_probs=157.0
Q ss_pred CCCcccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCcccCCCceeecccCCCChHHHHHHHHHHHHHHHHHhC
Q 015088 4 PGEKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESRTIRATYPEDYYHPMVLESCLLWEQAQSEIG 83 (413)
Q Consensus 4 ~~~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~gg~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 83 (413)
++.++||+|||||++|+++|+.|+++|++|+|||+.......+.. ..+ ...+++.++. .|
T Consensus 8 ~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~----~~l------------~~~~~~~l~~----lG 67 (500)
T 2qa1_A 8 HRSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRG----LGF------------TARTMEVFDQ----RG 67 (500)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCS----EEE------------CHHHHHHHHT----TT
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCc----ceE------------CHHHHHHHHH----CC
Confidence 456799999999999999999999999999999998655321111 111 1122222222 11
Q ss_pred Cee-EEeeceeeeCCCChhhHHHHHHHHhhCCCCccccCHHHHHHHcCCcccCCCCeEEEEecCCceeChHHHHHHHHHH
Q 015088 84 YKV-YFKAHQFDMGPSENKSLRSVIASCRKNSVPHQVLDCRQVLEKYSGRIEIPENWVGVATELGGVIKPTKAVSMFQTL 162 (413)
Q Consensus 84 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 162 (413)
+.- +... .. .....+ .+.. ++... . .... +....++...+.+.|.+.
T Consensus 68 l~~~~~~~---~~--~~~~~~---------~~~~---~~~~~----~------~~~~-----~~~~~i~~~~l~~~L~~~ 115 (500)
T 2qa1_A 68 ILPRFGEV---ET--STQGHF---------GGLP---IDFGV----L------EGAW-----QAAKTVPQSVTETHLEQW 115 (500)
T ss_dssp CGGGGCSC---CB--CCEEEE---------TTEE---EEGGG----S------TTGG-----GCEEEEEHHHHHHHHHHH
T ss_pred CHHHHHhc---cc--cccccc---------ccee---ccccc----C------CCCC-----CceeecCHHHHHHHHHHH
Confidence 100 0000 00 000000 0000 00000 0 0000 112345567888999999
Q ss_pred HHHCCCEEEcCceEEEEEEecccCCCeEEEEcCCCc---EEEcCEEEEcCCCChHHhhhhhcCCccceeEEEEEEEEEEe
Q 015088 163 AIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGE---KFWGKKCVVTAGAWVGKLVKRITGLELPIQAVETTVCYWRI 239 (413)
Q Consensus 163 ~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~---~i~ad~VV~A~G~~s~~l~~~~~g~~~~~~~~~g~~~~~~~ 239 (413)
+++.|++++++++|++++. + ++.+.+++.++. +++||+||.|+|.+|. +-+.+ |+..+-.......+...+
T Consensus 116 ~~~~gv~v~~~~~v~~i~~--~--~~~v~v~~~~~~g~~~~~a~~vVgADG~~S~-VR~~l-g~~~~~~~~~~~~~~~~~ 189 (500)
T 2qa1_A 116 ATGLGADIRRGHEVLSLTD--D--GAGVTVEVRGPEGKHTLRAAYLVGCDGGRSS-VRKAA-GFDFPGTAATMEMYLADI 189 (500)
T ss_dssp HHHTTCEEEETCEEEEEEE--E--TTEEEEEEEETTEEEEEEESEEEECCCTTCH-HHHHT-TCCCCEECCCCEEEEEEE
T ss_pred HHHCCCEEECCcEEEEEEE--c--CCeEEEEEEcCCCCEEEEeCEEEECCCcchH-HHHHc-CCCcCCCccceEEEEEEE
Confidence 9999999999999999988 6 456777766553 6999999999999984 44444 665554332222222222
Q ss_pred cCCCCCccccCCCCCeEEEcCCCceEecCCCCCCCcEEEecCCCCCCCCCCCCCCCchhHHHHHHHHHhhcCCCCCCCCC
Q 015088 240 KEGNEADYAVGGDFPSFASYGDPYIYGTPSLEYPGLIKIALHGGYPCDPDRRPWGPGLLLDSLKEWIQGRFAGRVDSNGP 319 (413)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~y~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~ 319 (413)
.... . + ..+ .+....+..+++.|..+ +.+.+.... . ++...+.......+.+.+.+.+.++..... ..
T Consensus 190 ~~~~---~-~-~~~-~~~~~~~g~~~~~p~~~--g~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~ 257 (500)
T 2qa1_A 190 KGVE---L-Q-PRM-IGETLPGGMVMVGPLPG--GITRIIVCE-R--GTPPQRRETPPSWHEVADAWKRLTGDDIAH-AE 257 (500)
T ss_dssp ESCC---C-C-CEE-EEEEETTEEEEEEEETT--TEEEEEEEE-T--TCCC-----CCCHHHHHHHHHHHHSCCCTT-SE
T ss_pred EeCC---C-C-Cce-EEEECCCcEEEEEEcCC--CEEEEEEEc-C--CCCCccccCCCCHHHHHHHHHHhcCCCCCc-cc
Confidence 2110 0 1 001 11122233455556543 333222110 0 000000000113456666777766532211 11
Q ss_pred eeeceeeee--------ecCCCCeEecCCCCCCCCCEEEEeCCCCCCCccchHHHHHH----HHHHhcCCCCcccccccc
Q 015088 320 VATQLCMYS--------ITPDEDFVIDFLGGEFGEDVVVAGGFSGHGFKMAPAVGRIL----ADLVLSGEAQGVELQHFR 387 (413)
Q Consensus 320 ~~~~~g~~~--------~t~d~~p~ig~~~~~~~~~~~~~~G~~~~G~~~a~~~a~~l----a~~i~~g~~~~~~~~~~~ 387 (413)
. .|...++ +..++..++|. -.+...-++|.|+.++..-|..| +..+. |......++.|+
T Consensus 258 ~-~~~~~~~~~~~~a~~~~~grv~L~GD-------AAH~~~P~~GqG~n~gi~DA~~La~~La~~~~-g~~~~~~L~~Y~ 328 (500)
T 2qa1_A 258 P-VWVSAFGNATRQVTEYRRGRVILAGD-------SAHIHLPAGGQGMNTSIQDAVNLGWKLGAVVN-GTATEELLDSYH 328 (500)
T ss_dssp E-EEEEEEECCEEECSCSEETTEEECGG-------GTEECCCCSSCHHHHHHHHHHHHHHHHHHHHT-TSSCHHHHHHHH
T ss_pred e-eEEEEeccCcEEccccccCCEEEEEc-------cccCCCCccccchhhhHHHHHHHHHHHHHHHc-CCCChHHHHHHH
Confidence 1 2322221 12233445443 34566677888888877655554 44443 544344577777
Q ss_pred ccccc
Q 015088 388 ISRFK 392 (413)
Q Consensus 388 ~~R~~ 392 (413)
-+|..
T Consensus 329 ~eR~~ 333 (500)
T 2qa1_A 329 SERHA 333 (500)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66654
No 30
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.66 E-value=1.9e-16 Score=148.59 Aligned_cols=72 Identities=19% Similarity=0.132 Sum_probs=52.0
Q ss_pred eeChHHHHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEc-CCC--cEEEcCEEEEcCCCChHHhhhhhcCCcc
Q 015088 149 VIKPTKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVT-SNG--EKFWGKKCVVTAGAWVGKLVKRITGLEL 225 (413)
Q Consensus 149 ~~~~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~-~~g--~~i~ad~VV~A~G~~s~~l~~~~~g~~~ 225 (413)
.++...+.+.|.+.+.+.|++++++++|+++.. +++ ....+.. .++ .+++||.||.|+|.+|. +.+.+ +...
T Consensus 98 ~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~--~~~-~~~~v~~~~~~~~~~~~a~~vIgAdG~~S~-vr~~~-g~~~ 172 (397)
T 3oz2_A 98 VLERDKFDKHLAALAAKAGADVWVKSPALGVIK--ENG-KVAGAKIRHNNEIVDVRAKMVIAADGFESE-FGRWA-GLKS 172 (397)
T ss_dssp EECHHHHHHHHHHHHHHHTCEEESSCCEEEEEE--ETT-EEEEEEEEETTEEEEEEEEEEEECCCTTCH-HHHHH-TCGG
T ss_pred EEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeee--ccc-eeeeeeecccccceEEEEeEEEeCCccccH-HHHHc-CCCc
Confidence 467788889999999999999999999999887 632 3333322 233 26899999999999873 33333 5443
No 31
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.65 E-value=7.6e-16 Score=149.42 Aligned_cols=215 Identities=10% Similarity=0.063 Sum_probs=122.8
Q ss_pred CceeChHHHHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCChHHhhhhhcCCcc-
Q 015088 147 GGVIKPTKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWVGKLVKRITGLEL- 225 (413)
Q Consensus 147 ~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s~~l~~~~~g~~~- 225 (413)
...+++..+.+.|.+.+++.|++++++ +|+++.. ++++..+.|++.+|++++||.||.|+|.++.-+...+ +...
T Consensus 167 ~~~~~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~--~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~~~~~~~-g~~~~ 242 (511)
T 2weu_A 167 AYHFDADEVARYLSEYAIARGVRHVVD-DVQHVGQ--DERGWISGVHTKQHGEISGDLFVDCTGFRGLLINQTL-GGRFQ 242 (511)
T ss_dssp EEEECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEE--CTTSCEEEEEESSSCEEECSEEEECCGGGCCCCCCCT-CCCEE
T ss_pred eEEEcHHHHHHHHHHHHHHCCCEEEEC-eEeEEEE--cCCCCEEEEEECCCCEEEcCEEEECCCcchHHHHHHh-CCCCc
Confidence 456888999999999999999999999 9999987 6333457788888877999999999999885322222 4432
Q ss_pred ---ceeEEEEEEEEEEecCCCCCccccCCCCCeEEEcCCCceEecCCCCCCCcEEEecCCCCCCCCCCCCCCCchhHHHH
Q 015088 226 ---PIQAVETTVCYWRIKEGNEADYAVGGDFPSFASYGDPYIYGTPSLEYPGLIKIALHGGYPCDPDRRPWGPGLLLDSL 302 (413)
Q Consensus 226 ---~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 302 (413)
+..+....+ .+...........+ ...........+|..|..+ . ..++... .++ ..+.++..+.+
T Consensus 243 ~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~g~~~~~P~~~--~-~~~g~~~----~~~--~~~~~~~~~~l 309 (511)
T 2weu_A 243 SFSDVLPNNRAV-ALRVPRENDEDMRP---YTTATAMSAGWMWTIPLFK--R-DGNGYVY----SDE--FISPEEAEREL 309 (511)
T ss_dssp ECTTTCCCCEEE-EEEEECSSGGGCCS---SEEEEEETTEEEEEEECSS--E-EEEEEEE----CTT--TSCHHHHHHHH
T ss_pred cccccCcccceE-EEEeccCCCCCCCc---ceeceecCCCcEEEEECCC--c-eEEEEEE----CCC--CCCHHHHHHHH
Confidence 112222222 22221111100111 1111122234567777654 2 2222110 010 11112233444
Q ss_pred HHHHHhhcCCCCCCCCCeeeceeeeee-cCCCCeEecCCCCCCCCCEEEEeCCCCCCCccchHHHHHHHHHHhcCCCCcc
Q 015088 303 KEWIQGRFAGRVDSNGPVATQLCMYSI-TPDEDFVIDFLGGEFGEDVVVAGGFSGHGFKMAPAVGRILADLVLSGEAQGV 381 (413)
Q Consensus 303 ~~~~~~~~p~~~~~~~~~~~~~g~~~~-t~d~~p~ig~~~~~~~~~~~~~~G~~~~G~~~a~~~a~~la~~i~~g~~~~~ 381 (413)
.+.+ ...|.+.+. ..+..|.+.++. ..++.++||... .....+.|.|+.+|...|..||+.+.++.....
T Consensus 310 ~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~rv~liGDAA-------h~~~P~~g~G~~~a~~da~~La~~l~~~~~~~~ 380 (511)
T 2weu_A 310 RSTV-APGRDDLEA-NHIQMRIGRNERTWINNCVAVGLSA-------AFVEPLESTGIFFIQHAIEQLVKHFPGERWDPV 380 (511)
T ss_dssp HHHH-CTTCTTSCC-EEEECCCEEESCSEETTEEECGGGT-------EECCGGGCCHHHHHHHHHHHHHHTCCCTTCCHH
T ss_pred HHHh-Ccccccccc-eeEEeeccccccccCCCEEEEechh-------hccCccccccHHHHHHHHHHHHHHhccCCCCHH
Confidence 4433 223333322 345566776653 347777887653 455678899999999999999999875433222
Q ss_pred cccccc
Q 015088 382 ELQHFR 387 (413)
Q Consensus 382 ~~~~~~ 387 (413)
.++.|+
T Consensus 381 ~l~~Y~ 386 (511)
T 2weu_A 381 LISAYN 386 (511)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 344444
No 32
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.63 E-value=1.2e-14 Score=138.61 Aligned_cols=200 Identities=14% Similarity=0.026 Sum_probs=107.5
Q ss_pred ceeChHHHHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCe--EEEEcC-CCc--EEEcCEEEEcCCCChHHhhhhhcC
Q 015088 148 GVIKPTKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGG--VTVVTS-NGE--KFWGKKCVVTAGAWVGKLVKRITG 222 (413)
Q Consensus 148 ~~~~~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~--~~v~~~-~g~--~i~ad~VV~A~G~~s~~l~~~~~g 222 (413)
..++...+.+.|.+.+.+.|++++++++|+++.. +++ .. +.+.+. +|+ +++||.||.|+|.++. +.+.+ +
T Consensus 95 ~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~--~~~-~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~-vr~~l-~ 169 (453)
T 3atr_A 95 FELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIF--EDG-YVKGAVLFNRRTNEELTVYSKVVVEATGYSRS-FRSKL-P 169 (453)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEE--ETT-EEEEEEEEETTTTEEEEEECSEEEECCGGGCT-TGGGS-C
T ss_pred EEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEE--ECC-EEEEEEEEEcCCCceEEEEcCEEEECcCCchh-hHHhc-C
Confidence 4577888999999999999999999999999987 622 22 333333 665 7999999999999874 33333 5
Q ss_pred Cccce----eE---EEEEEEEEEecCCCCCccccCCCCCeEEE----cCCCceEecCCCCCCCcEEEecCCCCCCCCCCC
Q 015088 223 LELPI----QA---VETTVCYWRIKEGNEADYAVGGDFPSFAS----YGDPYIYGTPSLEYPGLIKIALHGGYPCDPDRR 291 (413)
Q Consensus 223 ~~~~~----~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~y~~p~~~~~~~~~~~~~~~~~~~~~~~ 291 (413)
...|. .+ .......+....... .+ .+..+.. ..+.++++.|..+ +.+.++........+
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~g~~~~~P~~~--~~~~vg~~~~~~~~~--- 239 (453)
T 3atr_A 170 PELPITEDLDDKDADVAYREVLLTKEDIE---DH--DYLRIFIDQETSPGGYWWYFPKGK--NKVNVGLGIQGGMGY--- 239 (453)
T ss_dssp TTSGGGCCCCGGGEEEEEEEEEEESSCCT---TT--TEEEEECCTTTSTTSCEEEEEEET--TEEEEEEEEESSSCC---
T ss_pred CCCCcccCCCcccceeeeEEEEecCCCcc---CC--CeEEEEECCCCCCCcEEEEEECCC--CeEEEEEEecCCCCC---
Confidence 43321 11 111111222222110 00 1111111 1233456666543 333222110000011
Q ss_pred CCCCchhHHHHHHHHHhhcCCCCCCCCCeeeceeeeeecCCCCeEecCCCCCCCCCEEEE-------eCCCCCCCccchH
Q 015088 292 PWGPGLLLDSLKEWIQGRFAGRVDSNGPVATQLCMYSITPDEDFVIDFLGGEFGEDVVVA-------GGFSGHGFKMAPA 364 (413)
Q Consensus 292 ~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~t~d~~p~ig~~~~~~~~~~~~~-------~G~~~~G~~~a~~ 364 (413)
. + ..+.+.+.+.++.|.+.+. +++..+.+..|.. .|+ +....++++++ ..+.|.|+.+|..
T Consensus 240 -~--~-~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~p~~---~~~----~~~~~~~v~lvGDAAh~~~P~~G~G~~~Ai~ 307 (453)
T 3atr_A 240 -P--S-IHEYYKKYLDKYAPDVDKS-KLLVKGGALVPTR---RPL----YTMAWNGIIVIGDSGFTVNPVHGGGKGSAMI 307 (453)
T ss_dssp -C--C-HHHHHHHHHHHHCTTEEEE-EEEEEEEEEEECS---SCC----SCSEETTEEECGGGGTCSCTTTCCCHHHHHH
T ss_pred -C--C-HHHHHHHHHHhhhhhcCCC-eEEeccceeccCC---CCC----CceecCCEEEEeCcccCCCCCccccHHHHHH
Confidence 1 1 3455566666666655532 3444555554431 111 11111455433 2378999999999
Q ss_pred HHHHHHHHHh
Q 015088 365 VGRILADLVL 374 (413)
Q Consensus 365 ~a~~la~~i~ 374 (413)
.|..+|+.+.
T Consensus 308 da~~la~~l~ 317 (453)
T 3atr_A 308 SGYCAAKAIL 317 (453)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9988888875
No 33
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.63 E-value=4.9e-14 Score=133.33 Aligned_cols=56 Identities=11% Similarity=0.149 Sum_probs=47.9
Q ss_pred hHHHHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCCh
Q 015088 152 PTKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWV 213 (413)
Q Consensus 152 ~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s 213 (413)
+..+.+.|.+.+++.|++|+++++|++|.. + ++.+ |.+ +|++++||.||+|+|.+.
T Consensus 188 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~--~--~~~v-V~~-~g~~~~ad~Vv~a~~~~~ 243 (421)
T 3nrn_A 188 CKAVIDELERIIMENKGKILTRKEVVEINI--E--EKKV-YTR-DNEEYSFDVAISNVGVRE 243 (421)
T ss_dssp HHHHHHHHHHHHHTTTCEEESSCCEEEEET--T--TTEE-EET-TCCEEECSEEEECSCHHH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCeEEEEEE--E--CCEE-EEe-CCcEEEeCEEEECCCHHH
Confidence 478899999999999999999999999988 6 4566 654 566799999999999875
No 34
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.63 E-value=1.3e-14 Score=139.68 Aligned_cols=204 Identities=15% Similarity=0.085 Sum_probs=110.0
Q ss_pred HHHHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCChH-HhhhhhcC------Ccc
Q 015088 153 TKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWVG-KLVKRITG------LEL 225 (413)
Q Consensus 153 ~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s~-~l~~~~~g------~~~ 225 (413)
..+.+.|.+.+.+.|++|+++++|++|.. ++ ++.+.|.+.++ +++||+||+|++++.. .+++.... ..+
T Consensus 234 ~~l~~~l~~~l~~~g~~i~~~~~V~~i~~--~~-~~~~~v~~~~~-~~~ad~vv~a~p~~~~~~ll~~~~~~~~~~l~~~ 309 (477)
T 3nks_A 234 EMLPQALETHLTSRGVSVLRGQPVCGLSL--QA-EGRWKVSLRDS-SLEADHVISAIPASVLSELLPAEAAPLARALSAI 309 (477)
T ss_dssp THHHHHHHHHHHHTTCEEECSCCCCEEEE--CG-GGCEEEECSSC-EEEESEEEECSCHHHHHHHSCGGGHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEE--cC-CceEEEEECCe-EEEcCEEEECCCHHHHHHhccccCHHHHHHHhcC
Confidence 57889999999999999999999999988 62 23488877555 5999999999998653 33322100 012
Q ss_pred ceeEEEEEEEEEEecCCCCCccccCCCCCeEEEcCCCceEecCCCCCCCc--------------------EEEecCCCC-
Q 015088 226 PIQAVETTVCYWRIKEGNEADYAVGGDFPSFASYGDPYIYGTPSLEYPGL--------------------IKIALHGGY- 284 (413)
Q Consensus 226 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~p~~~~~~~--------------------~~~~~~~~~- 284 (413)
+..+..- +.+..+... + +... ..|+.|..+.... +......+.
T Consensus 310 ~~~~~~~--v~l~~~~~~---~-~~~~----------~g~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~l~~~~gg~~ 373 (477)
T 3nks_A 310 TAVSVAV--VNLQYQGAH---L-PVQG----------FGHLVPSSEDPGVLGIVYDSVAFPEQDGSPPGLRVTVMLGGSW 373 (477)
T ss_dssp CEEEEEE--EEEEETTCC---C-SSCS----------SEEECCTTTCSSEEEEECHHHHCGGGSTTTTCEEEEEEECHHH
T ss_pred CCCcEEE--EEEEECCCC---C-CCCC----------ceEEccCCCCCCceEEEEeccccCCCCCCCCceEEEEEECCcc
Confidence 3333322 222222211 1 1011 1222222111111 110000000
Q ss_pred C--CCCCCCCCCCchhHHHHHHHHHhhcCCCCCCC-CCeeece-eeeeecCCCCeEecCCCCC---CCCCEEEEeC-CCC
Q 015088 285 P--CDPDRRPWGPGLLLDSLKEWIQGRFAGRVDSN-GPVATQL-CMYSITPDEDFVIDFLGGE---FGEDVVVAGG-FSG 356 (413)
Q Consensus 285 ~--~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~-~~~~~~~-g~~~~t~d~~p~ig~~~~~---~~~~~~~~~G-~~~ 356 (413)
. ...+..+.+.++..+.+++.+.++++...+.. ..+..|. ++-.++++..+.++.+... ..+++++++. +.|
T Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~v~rw~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~l~G~~~~G 453 (477)
T 3nks_A 374 LQTLEASGCVLSQELFQQRAQEAAATQLGLKEMPSHCLVHLHKNCIPQYTLGHWQKLESARQFLTAHRLPLTLAGASYEG 453 (477)
T ss_dssp HHHHHHSSCCCCHHHHHHHHHHHHHHHHCCCSCCSEEEEEEEEEEEECCBTTHHHHHHHHHHHHHHTTCSEEECSTTTSC
T ss_pred ccccccccCCCCHHHHHHHHHHHHHHHhCCCCCCcEEEEEEcCCccCCCCCCHHHHHHHHHHHHHhcCCCEEEEccCCCC
Confidence 0 00000011223366777778888876433210 0122343 4444677777655433210 0157888765 677
Q ss_pred CCCccchHHHHHHHHHHhcC
Q 015088 357 HGFKMAPAVGRILADLVLSG 376 (413)
Q Consensus 357 ~G~~~a~~~a~~la~~i~~g 376 (413)
.|+.-+...|+.+|+.|+..
T Consensus 454 ~gv~~a~~sg~~aA~~il~~ 473 (477)
T 3nks_A 454 VAVNDCIESGRQAAVSVLGT 473 (477)
T ss_dssp CSHHHHHHHHHHHHHHHHHC
T ss_pred CcHHHHHHHHHHHHHHHHhc
Confidence 88888999999999999843
No 35
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.62 E-value=9.4e-15 Score=137.03 Aligned_cols=158 Identities=18% Similarity=0.212 Sum_probs=97.3
Q ss_pred CCCcccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCc-ccCCCceeecccCCCC-----hHHHHHHHHHHHHH
Q 015088 4 PGEKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGS-SHGESRTIRATYPEDY-----YHPMVLESCLLWEQ 77 (413)
Q Consensus 4 ~~~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~gg~~~-s~~~~~~~~~~~~~~~-----~~~l~~~~~~~~~~ 77 (413)
+..++||+|||||++|+++|+.|+++|++|+|||+....++... +.+....+........ ...+.....
T Consensus 24 ~~~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l----- 98 (417)
T 3v76_A 24 VAEKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSAL----- 98 (417)
T ss_dssp ----CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHH-----
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHH-----
Confidence 34568999999999999999999999999999999987643211 1111111111100000 000000000
Q ss_pred HHHHhCCeeEEeeceeeeCCCChhhHHHHHHHHhhCCCCccccCHHHHHHHcCCcccCCCCeEEEEecCCceeChHHHHH
Q 015088 78 AQSEIGYKVYFKAHQFDMGPSENKSLRSVIASCRKNSVPHQVLDCRQVLEKYSGRIEIPENWVGVATELGGVIKPTKAVS 157 (413)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
... ......++....+++..... ....+. ......+.+
T Consensus 99 --~~~-------------------~~~~~~~~~~~~Gi~~~~~~-----------------~g~~~~----~~~~~~l~~ 136 (417)
T 3v76_A 99 --ARY-------------------RPQDFVALVERHGIGWHEKT-----------------LGQLFC----DHSAKDIIR 136 (417)
T ss_dssp --HHS-------------------CHHHHHHHHHHTTCCEEECS-----------------TTEEEE----SSCHHHHHH
T ss_pred --Hhc-------------------CHHHHHHHHHHcCCCcEEee-----------------CCEEee----CCCHHHHHH
Confidence 000 01233344444454322111 011111 234578889
Q ss_pred HHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCCh
Q 015088 158 MFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWV 213 (413)
Q Consensus 158 ~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s 213 (413)
.|.+.+++.|++++++++|+++.. + ++.+.|.+.+| +++||.||+|+|+++
T Consensus 137 ~L~~~l~~~Gv~i~~~~~V~~i~~--~--~~~~~V~~~~g-~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 137 MLMAEMKEAGVQLRLETSIGEVER--T--ASGFRVTTSAG-TVDAASLVVASGGKS 187 (417)
T ss_dssp HHHHHHHHHTCEEECSCCEEEEEE--E--TTEEEEEETTE-EEEESEEEECCCCSS
T ss_pred HHHHHHHHCCCEEEECCEEEEEEE--e--CCEEEEEECCc-EEEeeEEEECCCCcc
Confidence 999999999999999999999988 6 45788999888 599999999999998
No 36
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.60 E-value=9e-15 Score=141.63 Aligned_cols=177 Identities=21% Similarity=0.283 Sum_probs=98.6
Q ss_pred CCCCCCcccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCcccCCCceeecccCCCChHHHHHHHHHHHHHHHH
Q 015088 1 MEFPGEKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESRTIRATYPEDYYHPMVLESCLLWEQAQS 80 (413)
Q Consensus 1 m~~~~~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~gg~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 80 (413)
|+++..++||+|||||++|+++|+.|+++|++|+|||+....... . + ..+. +............+..+..
T Consensus 1 M~~~~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~-~--g--~~~~-----~~~~~~~l~~lgl~~~~~~ 70 (512)
T 3e1t_A 1 MSTRPEVFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQ-I--G--ESLL-----PATVHGICAMLGLTDEMKR 70 (512)
T ss_dssp ----CEEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCC-S--C--CBCC-----HHHHTTHHHHTTCHHHHHT
T ss_pred CCCCCccCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCCCC-C--C--cccC-----cchHHHHHHHhCcHHHHHH
Confidence 555556799999999999999999999999999999998754211 0 0 0000 0000001111122222221
Q ss_pred HhCCeeEEeeceeeeCCCChhhHHHHHHHHhhCCCCccccCHHHHHHHcCCcccCCCCeEEEEecCCceeChHHHHHHHH
Q 015088 81 EIGYKVYFKAHQFDMGPSENKSLRSVIASCRKNSVPHQVLDCRQVLEKYSGRIEIPENWVGVATELGGVIKPTKAVSMFQ 160 (413)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 160 (413)
. +... .....+....... ..... +.. ... ........++...+.+.|.
T Consensus 71 ~-~~~~-~~~~~~~~~~~~~-------------~~~~~----------~~~----~~~---~~~~~~~~v~r~~l~~~L~ 118 (512)
T 3e1t_A 71 A-GFPI-KRGGTFRWGKEPE-------------PWTFG----------FTR----HPD---DPYGFAYQVERARFDDMLL 118 (512)
T ss_dssp T-TCCE-ECEEEEECSSCSS-------------CEEEE----------SSS----SSS---STTCCEEBCCHHHHHHHHH
T ss_pred c-CCcc-ccCceEEecCCcc-------------ccccc----------ccc----CCC---CCcceeeEecHHHHHHHHH
Confidence 1 1111 1111111110000 00000 000 000 0001124577889999999
Q ss_pred HHHHHCCCEEEcCceEEEEEEecccCC-CeEEEEcCCCc--EEEcCEEEEcCCCChHHhhhhhcCC
Q 015088 161 TLAIKNGAVLRDNMEVKTVLKVKDAVK-GGVTVVTSNGE--KFWGKKCVVTAGAWVGKLVKRITGL 223 (413)
Q Consensus 161 ~~~~~~Gv~i~~~~~V~~i~~~~~~~~-~~~~v~~~~g~--~i~ad~VV~A~G~~s~~l~~~~~g~ 223 (413)
+.+++.|++++++++|+++.. +++. .++.+.+.+|+ +++||.||.|+|.++. +.+.+ +.
T Consensus 119 ~~a~~~Gv~i~~~~~V~~v~~--~~~~v~gv~~~~~dG~~~~i~ad~VI~AdG~~S~-vr~~l-g~ 180 (512)
T 3e1t_A 119 RNSERKGVDVRERHEVIDVLF--EGERAVGVRYRNTEGVELMAHARFIVDASGNRTR-VSQAV-GE 180 (512)
T ss_dssp HHHHHTTCEEESSCEEEEEEE--ETTEEEEEEEECSSSCEEEEEEEEEEECCCTTCS-SGGGT-CC
T ss_pred HHHHhCCCEEEcCCEEEEEEE--ECCEEEEEEEEeCCCCEEEEEcCEEEECCCcchH-HHHHc-CC
Confidence 999999999999999999988 6321 13566666774 7999999999999873 44444 43
No 37
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.60 E-value=2.8e-14 Score=137.23 Aligned_cols=206 Identities=11% Similarity=0.083 Sum_probs=108.8
Q ss_pred HHHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCCh-HHhhhhhcCC----cccee
Q 015088 154 KAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWV-GKLVKRITGL----ELPIQ 228 (413)
Q Consensus 154 ~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s-~~l~~~~~g~----~~~~~ 228 (413)
.+.+.|.+.+.+ ++|+++++|++|.. + ++.+.|++.+| +++||+||+|++.+. ..++... .. .++..
T Consensus 237 ~l~~~l~~~l~~--~~i~~~~~V~~i~~--~--~~~~~v~~~~g-~~~ad~vV~a~p~~~~~~ll~~~-~~~~~~~~~~~ 308 (475)
T 3lov_A 237 SLIERLEEVLER--SEIRLETPLLAISR--E--DGRYRLKTDHG-PEYADYVLLTIPHPQVVQLLPDA-HLPELEQLTTH 308 (475)
T ss_dssp HHHHHHHHHCSS--CEEESSCCCCEEEE--E--TTEEEEECTTC-CEEESEEEECSCHHHHHHHCTTS-CCHHHHTCCEE
T ss_pred HHHHHHHhhccC--CEEEcCCeeeEEEE--e--CCEEEEEECCC-eEECCEEEECCCHHHHHHHcCcc-CHHHHhcCCCC
Confidence 344444443322 79999999999988 6 46789999889 599999999999876 3443321 11 24555
Q ss_pred EEEEEEEEEEecCCCCCccccCCCCCeEEEcCCC-ce----Ee---cCCCCCCCcEEEecCCCCCCCCCCCCCCCchhHH
Q 015088 229 AVETTVCYWRIKEGNEADYAVGGDFPSFASYGDP-YI----YG---TPSLEYPGLIKIALHGGYPCDPDRRPWGPGLLLD 300 (413)
Q Consensus 229 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----y~---~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (413)
++...++.++-+. .... ..+-.+...... .+ |. .|.......+..+...+ .........+.++..+
T Consensus 309 ~~~~v~l~~~~~~--~~~~---~g~g~l~~~~~~~~~~~~~~~s~~~~~~~p~~~~l~~~~~~-~~~~~~~~~~~e~~~~ 382 (475)
T 3lov_A 309 STATVTMIFDQQQ--SLPI---EGTGFVVNRRAPYSITACTAIDQKWNHSAPDHTVLRAFVGR-PGNDHLVHESDEVLQQ 382 (475)
T ss_dssp EEEEEEEEEECCS--SCSS---SSSEEEECTTSSCSEEEEEEHHHHCTTTCTTEEEEEEEECB-TTBCGGGGSCHHHHHH
T ss_pred eEEEEEEEECCcC--CCCC---CCEEEEecCCCCCceEEEEEEcccCCCCCCCcEEEEEEeCC-CCCCcccCCCHHHHHH
Confidence 6555555555222 1110 001111111111 01 00 01111001111111111 1111111122334778
Q ss_pred HHHHHHHhhcCCCCCC-CCCeeeceeeee-ecCCCCeEecCC-----CCCCCCCEEEEe-CCCCCCCccchHHHHHHHHH
Q 015088 301 SLKEWIQGRFAGRVDS-NGPVATQLCMYS-ITPDEDFVIDFL-----GGEFGEDVVVAG-GFSGHGFKMAPAVGRILADL 372 (413)
Q Consensus 301 ~l~~~~~~~~p~~~~~-~~~~~~~~g~~~-~t~d~~p~ig~~-----~~~~~~~~~~~~-G~~~~G~~~a~~~a~~la~~ 372 (413)
.+++.+.++++...+. ...+..|....| ++++....+..+ ... ++||+++ .+.+.|+.-+...|+.+|+.
T Consensus 383 ~~~~~L~~~~g~~~~p~~~~v~~w~~a~p~~~~g~~~~~~~~~~~l~~~~--~~l~~aG~~~~g~g~~~a~~sG~~aA~~ 460 (475)
T 3lov_A 383 AVLQDLEKICGRTLEPKQVIISRLMDGLPAYTVGHADRIQRVREEVLAQY--PGIYLAGLAYDGVGLPDCVASAKTMIES 460 (475)
T ss_dssp HHHHHHHHHHSSCCCCSEEEEEEEEEEEECCCTTHHHHHHHHHHHHHHHS--TTEEECSTTTSCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCeEEEEEEcccCCCCCCCChHHHHHHHHHHHHhhC--CCEEEEccCCCCCCHHHHHHHHHHHHHH
Confidence 8888899998753321 012345655444 555543211111 012 6899887 57777899999999999999
Q ss_pred Hhc
Q 015088 373 VLS 375 (413)
Q Consensus 373 i~~ 375 (413)
|+.
T Consensus 461 i~~ 463 (475)
T 3lov_A 461 IEL 463 (475)
T ss_dssp HHH
T ss_pred HHH
Confidence 984
No 38
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.59 E-value=4.1e-14 Score=138.67 Aligned_cols=65 Identities=15% Similarity=0.111 Sum_probs=52.1
Q ss_pred ceeChHHHHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcC------CC---------cEEEcCEEEEcCCCC
Q 015088 148 GVIKPTKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTS------NG---------EKFWGKKCVVTAGAW 212 (413)
Q Consensus 148 ~~~~~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~------~g---------~~i~ad~VV~A~G~~ 212 (413)
..++...+.+.|.+.+++.|++|+++++|+++.. ++++..+.|.+. +| .+++||.||+|+|.+
T Consensus 139 ~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~--~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~ 216 (584)
T 2gmh_A 139 YVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILF--HEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCH 216 (584)
T ss_dssp EECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEE--CTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTT
T ss_pred EEEeHHHHHHHHHHHHHHcCCEEEcCCEEEEEEE--cCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCC
Confidence 4556788999999999999999999999999988 633234446654 33 579999999999998
Q ss_pred hH
Q 015088 213 VG 214 (413)
Q Consensus 213 s~ 214 (413)
+.
T Consensus 217 S~ 218 (584)
T 2gmh_A 217 GH 218 (584)
T ss_dssp CH
T ss_pred ch
Confidence 74
No 39
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.56 E-value=2.1e-14 Score=140.00 Aligned_cols=216 Identities=7% Similarity=-0.034 Sum_probs=115.8
Q ss_pred cCCceeChHHHHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCChHHhhhhhcCCc
Q 015088 145 ELGGVIKPTKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWVGKLVKRITGLE 224 (413)
Q Consensus 145 ~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s~~l~~~~~g~~ 224 (413)
+....+++..+.+.|.+.+++.|++++++ +|+++.. ++++..+.|.+.+|++++||.||.|+|.++.-....+ +..
T Consensus 157 ~~~~~i~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~--~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~~~~~~l-g~~ 232 (538)
T 2aqj_A 157 SHAWHFDAHLVADFLKRWAVERGVNRVVD-EVVDVRL--NNRGYISNLLTKEGRTLEADLFIDCSGMRGLLINQAL-KEP 232 (538)
T ss_dssp CCEEEECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEE--CTTSCEEEEEETTSCEECCSEEEECCGGGCCCCCCCT-CCC
T ss_pred CccEEEeHHHHHHHHHHHHHHCCCEEEEe-eEeEEEE--cCCCcEEEEEECCCcEEEeCEEEECCCCchhhHHHHh-CCC
Confidence 44567899999999999999999999999 8999987 6333456788888877999999999999885322222 432
Q ss_pred cce----eEEEEEEEEEEecCCCC-CccccCCCCCeEEEcCCCceEecCCCCCCCcEEEecCCCCCCCCCCCCCCCchhH
Q 015088 225 LPI----QAVETTVCYWRIKEGNE-ADYAVGGDFPSFASYGDPYIYGTPSLEYPGLIKIALHGGYPCDPDRRPWGPGLLL 299 (413)
Q Consensus 225 ~~~----~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~y~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (413)
..- .+... .+.+..+.... ..+.+ ...........++..|..+ +. .++... ..+ ..+.++..
T Consensus 233 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~g~~~~~p~~~--~~-~~g~v~----~~~--~~~~~~~~ 299 (538)
T 2aqj_A 233 FIDMSDYLLCDS-AVASAVPNDDARDGVEP---YTSSIAMNSGWTWKIPMLG--RF-GSGYVF----SSH--FTSRDQAT 299 (538)
T ss_dssp EEECTTTCCCCE-EEEEEEECCHHHHCCCS---SEEEEECSSEEEEEEEETT--EE-EEEEEE----CTT--TSCHHHHH
T ss_pred ccccccccccce-EEEEecccCCcccCCCC---ceeeeecCCceEEEecCCC--ce-EEEEEE----cCC--CCChHHHH
Confidence 210 11111 12222221100 00111 1111122233456666543 21 111100 000 00111133
Q ss_pred HHHHHHHHhhcCCCCCCCCCeeeceeeee-ecCCCCeEecCCCCCCCCCEEEEeCCCCCCCccchHHHHHHHHHHhcCCC
Q 015088 300 DSLKEWIQGRFAGRVDSNGPVATQLCMYS-ITPDEDFVIDFLGGEFGEDVVVAGGFSGHGFKMAPAVGRILADLVLSGEA 378 (413)
Q Consensus 300 ~~l~~~~~~~~p~~~~~~~~~~~~~g~~~-~t~d~~p~ig~~~~~~~~~~~~~~G~~~~G~~~a~~~a~~la~~i~~g~~ 378 (413)
+.+.+.+.. +.+.+. ..+..+.+.++ +..++..++|.. .+....++|.|+.+|...|..|++.+.++..
T Consensus 300 ~~l~~~~~~--~~~~~~-~~~~~~~~~~~~~~~grvvliGDA-------Ah~~~P~~gqG~~~a~~da~~La~~L~~~~~ 369 (538)
T 2aqj_A 300 ADFLKLWGL--SDNQPL-NQIKFRVGRNKRAWVNNCVSIGLS-------SCFLEPLESTGIYFIYAALYQLVKHFPDTSF 369 (538)
T ss_dssp HHHHHHHTC--CTTCCC-EEEECCCEEESCSEETTEEECGGG-------TEECCGGGSCHHHHHHHHHHHHHHTCCBTTC
T ss_pred HHHHHHhcC--CCCCCc-eEEeeccccccccccCCEEEEccc-------ccccCcchhccHHHHHHHHHHHHHHhhccCC
Confidence 333333322 112221 23334445433 234445555533 3455777899999999999999998874433
Q ss_pred Ccccccccc
Q 015088 379 QGVELQHFR 387 (413)
Q Consensus 379 ~~~~~~~~~ 387 (413)
....++.|+
T Consensus 370 ~~~~l~~Y~ 378 (538)
T 2aqj_A 370 DPRLSDAFN 378 (538)
T ss_dssp CHHHHHHHH
T ss_pred CHHHHHHHH
Confidence 223345553
No 40
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.55 E-value=1.4e-13 Score=128.21 Aligned_cols=65 Identities=15% Similarity=0.083 Sum_probs=53.5
Q ss_pred ceeChHHHHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCChHHhhhhh
Q 015088 148 GVIKPTKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWVGKLVKRI 220 (413)
Q Consensus 148 ~~~~~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s~~l~~~~ 220 (413)
..++...+.+.|.+.+.+.|++++++++|++++. + + .|++.+|+++++|.||.|+|.++. +.+.+
T Consensus 102 ~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~---~--~v~~~~g~~~~ad~vV~AdG~~s~-vr~~l 166 (379)
T 3alj_A 102 RIMTRSHLHDALVNRARALGVDISVNSEAVAADP--V---G--RLTLQTGEVLEADLIVGADGVGSK-VRDSI 166 (379)
T ss_dssp EEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET--T---T--EEEETTSCEEECSEEEECCCTTCH-HHHHH
T ss_pred EEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe--C---C--EEEECCCCEEEcCEEEECCCccHH-HHHHh
Confidence 4567788999999999999999999999999965 4 3 677778888999999999999884 33434
No 41
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.55 E-value=3.8e-14 Score=134.86 Aligned_cols=166 Identities=20% Similarity=0.180 Sum_probs=97.7
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCcccCCC-ceeecccCCCChHHHHHHHHHHHHHHHHHhCC
Q 015088 6 EKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGES-RTIRATYPEDYYHPMVLESCLLWEQAQSEIGY 84 (413)
Q Consensus 6 ~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~gg~~~s~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 84 (413)
.++||+|||||++|+++|+.|+++|.+|+|||+....++.....+.+ ..+... .. +..+...++.
T Consensus 25 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~---~~-----------~~~~~~~~~~ 90 (447)
T 2i0z_A 25 MHYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNR---LP-----------LDEIVKHIPG 90 (447)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEEC---SC-----------HHHHHHTCTB
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCc---cc-----------HHHHHHHhcc
Confidence 45899999999999999999999999999999987654211111110 011100 00 0011111100
Q ss_pred eeEEeeceeeeCCCChhhHHHHHHHHhhCCCCccccCHHHHHHHcCCcccCCCCeEEEEecCCceeChHHHHHHHHHHHH
Q 015088 85 KVYFKAHQFDMGPSENKSLRSVIASCRKNSVPHQVLDCRQVLEKYSGRIEIPENWVGVATELGGVIKPTKAVSMFQTLAI 164 (413)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 164 (413)
. ..+....-.........+++...|+++.... ...++... .....+.+.|.+.++
T Consensus 91 ~-----~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~-----------------~g~~~p~~---~~~~~l~~~L~~~~~ 145 (447)
T 2i0z_A 91 N-----GRFLYSAFSIFNNEDIITFFENLGVKLKEED-----------------HGRMFPVS---NKAQSVVDALLTRLK 145 (447)
T ss_dssp T-----GGGGHHHHHHSCHHHHHHHHHHTTCCEEECG-----------------GGEEEETT---CCHHHHHHHHHHHHH
T ss_pred C-----hHHHHHHHHhcCHHHHHHHHHhcCCceEEee-----------------CCEEECCC---CCHHHHHHHHHHHHH
Confidence 0 0000000000001223334444454322110 01111111 134788899999999
Q ss_pred HCCCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCCh
Q 015088 165 KNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWV 213 (413)
Q Consensus 165 ~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s 213 (413)
+.|++++++++|++|.. ++ +..+.|++.+|++++||.||+|+|+++
T Consensus 146 ~~GV~i~~~~~V~~i~~--~~-~~v~~V~~~~G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 146 DLGVKIRTNTPVETIEY--EN-GQTKAVILQTGEVLETNHVVIAVGGKS 191 (447)
T ss_dssp HTTCEEECSCCEEEEEE--ET-TEEEEEEETTCCEEECSCEEECCCCSS
T ss_pred HCCCEEEeCcEEEEEEe--cC-CcEEEEEECCCCEEECCEEEECCCCCc
Confidence 99999999999999987 52 244888888887799999999999998
No 42
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.55 E-value=4.6e-13 Score=131.33 Aligned_cols=181 Identities=18% Similarity=0.162 Sum_probs=104.9
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCcccCCCceeecccCCCChHHHH--HHHHHHHHHHHHHhC
Q 015088 6 EKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESRTIRATYPEDYYHPMV--LESCLLWEQAQSEIG 83 (413)
Q Consensus 6 ~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~gg~~~s~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~ 83 (413)
..+||+|||||++|+++|+.|+++|++|+||||....++... ...+.+..... .....+. .....++..+...-.
T Consensus 125 ~~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~--~a~gg~~~~~~-~~~~~~g~~ds~~~~~~~~~~~g~ 201 (571)
T 1y0p_A 125 DTVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAK--LAAGGMNAAWT-DQQKAKKITDSPELMFEDTMKGGQ 201 (571)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGG--GCCSCEECSSC-HHHHHTTCCCCHHHHHHHHHHHTT
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchh--hcCceEEeCCC-HHHHHhCCCCCHHHHHHHHHHhcC
Confidence 368999999999999999999999999999999987754322 22222221110 0000000 000011111111100
Q ss_pred CeeEEeeceeeeCCCChhh-------HHHHHHHHhhCCCCccccCHHHHHHHcCCcccCCCCeEEEEecCCceeChHHHH
Q 015088 84 YKVYFKAHQFDMGPSENKS-------LRSVIASCRKNSVPHQVLDCRQVLEKYSGRIEIPENWVGVATELGGVIKPTKAV 156 (413)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (413)
. ..+.+. .....+++...|+++..+. ..+. ......+.+.++...+..+.
T Consensus 202 ~------------~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~------~~~g-----~~~~r~~~~~~g~~~g~~l~ 258 (571)
T 1y0p_A 202 N------------INDPALVKVLSSHSKDSVDWMTAMGADLTDVG------MMGG-----ASVNRAHRPTGGAGVGAHVV 258 (571)
T ss_dssp T------------CSCHHHHHHHHHHHHHHHHHHHHTTCCCCEEE------CCTT-----CSSCCEEESTTTCCHHHHHH
T ss_pred C------------CCCHHHHHHHHHccHHHHHHHHhcCCCCccCc------ccCC-----cCCCeeEecCCCCCCHHHHH
Confidence 0 000111 1233445555665542110 0011 11122334444556678899
Q ss_pred HHHHHHHHHCCCEEEcCceEEEEEEecccCCCe--EEEEcCCCc--EEEcCEEEEcCCCChH
Q 015088 157 SMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGG--VTVVTSNGE--KFWGKKCVVTAGAWVG 214 (413)
Q Consensus 157 ~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~--~~v~~~~g~--~i~ad~VV~A~G~~s~ 214 (413)
+.|.+.+++.|++|+++++|++|.. ++++.. +.+.+.+|+ +++||.||+|+|+++.
T Consensus 259 ~~L~~~~~~~gv~i~~~~~v~~l~~--~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~~ 318 (571)
T 1y0p_A 259 QVLYDNAVKRNIDLRMNTRGIEVLK--DDKGTVKGILVKGMYKGYYWVKADAVILATGGFAK 318 (571)
T ss_dssp HHHHHHHHHTTCEEESSEEEEEEEE--CTTSCEEEEEEEETTTEEEEEECSEEEECCCCCTT
T ss_pred HHHHHHHHhcCCEEEeCCEeeEeEE--cCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCccc
Confidence 9999999999999999999999988 642233 334443665 6899999999999874
No 43
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.55 E-value=2.8e-13 Score=132.66 Aligned_cols=189 Identities=16% Similarity=0.102 Sum_probs=107.6
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCcccCCCceeecccCCCChHH--HHHHHHHHHHHHHHHh
Q 015088 5 GEKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESRTIRATYPEDYYHP--MVLESCLLWEQAQSEI 82 (413)
Q Consensus 5 ~~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~gg~~~s~~~~~~~~~~~~~~~~~~--l~~~~~~~~~~~~~~~ 82 (413)
+..+||+|||||++|+++|+.|+++|.+|+||||....++. +....+.+...... .... +......++..+.+..
T Consensus 119 ~~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~--s~~s~gg~~~~~~~-~~~~~g~~ds~~~~~~~~~~~~ 195 (566)
T 1qo8_A 119 SETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGN--SMISAGGMNAVGTK-QQTAHGVEDKVEWFIEDAMKGG 195 (566)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTT--GGGCCSCEECSSCH-HHHHTTCCCCHHHHHHHHHHHT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCc--ccccCceeEccCCH-HHHHhCCCCCHHHHHHHHHHhc
Confidence 35689999999999999999999999999999999877533 22222222211100 0000 0000011122221111
Q ss_pred CCeeEEeeceeeeCCCChhhHHHHHHHHhhCCCCccccCHHHHHHHcCCcccCCCCeEEEEecCCceeChHHHHHHHHHH
Q 015088 83 GYKVYFKAHQFDMGPSENKSLRSVIASCRKNSVPHQVLDCRQVLEKYSGRIEIPENWVGVATELGGVIKPTKAVSMFQTL 162 (413)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 162 (413)
... .....+. .-.......++++...|+++..+. ..+. ......+.+.++.+.+..+.+.|.+.
T Consensus 196 ~~~--~~~~~~~---~~~~~~~~~i~~l~~~Gv~~~~~~------~~~g-----~~~~r~~~~~~~~~~~~~l~~~L~~~ 259 (566)
T 1qo8_A 196 RQQ--NDIKLVT---ILAEQSADGVQWLESLGANLDDLK------RSGG-----ARVDRTHRPHGGKSSGPEIIDTLRKA 259 (566)
T ss_dssp TTC--SCHHHHH---HHHHHHHHHHHHHHHTTCCCCEEE------CCTT-----CSSCCEEECSSSSCHHHHHHHHHHHH
T ss_pred CCC--CCHHHHH---HHHhccHHHHHHHHhcCCcccccc------ccCC-----CCCCceeecCCCCCCHHHHHHHHHHH
Confidence 000 0000000 000011234455556666543211 0111 11112234445556778899999999
Q ss_pred HHHCCCEEEcCceEEEEEEecccCCCe--EEEEcCCCc--EEEcCEEEEcCCCChH
Q 015088 163 AIKNGAVLRDNMEVKTVLKVKDAVKGG--VTVVTSNGE--KFWGKKCVVTAGAWVG 214 (413)
Q Consensus 163 ~~~~Gv~i~~~~~V~~i~~~~~~~~~~--~~v~~~~g~--~i~ad~VV~A~G~~s~ 214 (413)
+++.|++|+++++|++|.. ++++.. +.+.+.+|+ +++||.||+|+|+++.
T Consensus 260 ~~~~gv~i~~~~~v~~l~~--~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s~ 313 (566)
T 1qo8_A 260 AKEQGIDTRLNSRVVKLVV--NDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYGM 313 (566)
T ss_dssp HHHTTCCEECSEEEEEEEE--CTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCTT
T ss_pred HHhcCCEEEeCCEEEEEEE--CCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCccc
Confidence 9999999999999999988 631233 344444675 6899999999999885
No 44
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=99.54 E-value=1.5e-13 Score=136.29 Aligned_cols=73 Identities=19% Similarity=0.156 Sum_probs=54.9
Q ss_pred eeChHHHHHHHHHHHHHCCC--EEEcCceEEEEEEecccC--CCeEEEEcC------CC--cEEEcCEEEEcCCCChHHh
Q 015088 149 VIKPTKAVSMFQTLAIKNGA--VLRDNMEVKTVLKVKDAV--KGGVTVVTS------NG--EKFWGKKCVVTAGAWVGKL 216 (413)
Q Consensus 149 ~~~~~~~~~~l~~~~~~~Gv--~i~~~~~V~~i~~~~~~~--~~~~~v~~~------~g--~~i~ad~VV~A~G~~s~~l 216 (413)
.++...+.+.|.+.+.+.|+ +|+++++|++++. +++ +..+.|++. +| ++++||+||.|+|.+|. +
T Consensus 137 ~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~--~~~~~~~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S~-v 213 (639)
T 2dkh_A 137 ILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKV--DHGAADYPVTVTLERCDAAHAGQIETVQARYVVGCDGARSN-V 213 (639)
T ss_dssp ECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEE--CTTCSSCCEEEEEEECSGGGTTCEEEEEEEEEEECCCTTCH-H
T ss_pred eeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEE--CCCCCcCCEEEEEEeccccCCCCeEEEEeCEEEECCCcchH-H
Confidence 45667889999999999987 9999999999988 632 125666543 45 47999999999999985 4
Q ss_pred hhhhcCCcc
Q 015088 217 VKRITGLEL 225 (413)
Q Consensus 217 ~~~~~g~~~ 225 (413)
-+.+ |+..
T Consensus 214 R~~l-g~~~ 221 (639)
T 2dkh_A 214 RRAI-GRQL 221 (639)
T ss_dssp HHHT-TCCC
T ss_pred HHHh-CCCC
Confidence 3444 6544
No 45
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.53 E-value=4.8e-14 Score=137.61 Aligned_cols=212 Identities=11% Similarity=0.017 Sum_probs=115.0
Q ss_pred CceeChHHHHHHHHHHHHHC-CCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCChHHhhhhhcCCcc
Q 015088 147 GGVIKPTKAVSMFQTLAIKN-GAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWVGKLVKRITGLEL 225 (413)
Q Consensus 147 ~~~~~~~~~~~~l~~~~~~~-Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s~~l~~~~~g~~~ 225 (413)
...+++..+.+.|.+.+++. |++++++ +|+++.. ++++..+.|.+.+|++++||.||.|+|.++.-+.+.+ +...
T Consensus 188 ~~~~~~~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~--~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S~~~~~~l-g~~~ 263 (550)
T 2e4g_A 188 AWHFDAHLVADFLRRFATEKLGVRHVED-RVEHVQR--DANGNIESVRTATGRVFDADLFVDCSGFRGLLINKAM-EEPF 263 (550)
T ss_dssp EEEECHHHHHHHHHHHHHHHSCCEEEEC-CEEEEEE--CTTSCEEEEEETTSCEEECSEEEECCGGGCCCCCCCT-CCCE
T ss_pred ceEEcHHHHHHHHHHHHHhcCCcEEEEC-eEeEEEE--cCCCCEEEEEECCCCEEECCEEEECCCCchhhHHHHh-CCCc
Confidence 35688899999999999998 9999999 9999987 5333457788888888999999999999885333333 4332
Q ss_pred c----eeEEEEEEEEEEecCCCC-CccccCCCCCeEEEcCCCceEecCCCCCCCcEEEecCCCCCCCCCCCCCCCchhHH
Q 015088 226 P----IQAVETTVCYWRIKEGNE-ADYAVGGDFPSFASYGDPYIYGTPSLEYPGLIKIALHGGYPCDPDRRPWGPGLLLD 300 (413)
Q Consensus 226 ~----~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~y~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (413)
+ ..+... .+.+....... ....+ ............+.+|..+ . ...+.... .. ..+ .+
T Consensus 264 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~g~~~~ipl~~--~-~~~g~v~~----~~--~~~----~~ 326 (550)
T 2e4g_A 264 LDMSDHLLNDS-AVATQVPHDDDANGVEP---FTSAIAMKSGWTWKIPMLG--R-FGTGYVYS----SR--FAT----ED 326 (550)
T ss_dssp EECTTTCCCCE-EEEEEEECCHHHHCCCS---SEEEEECSSEEEEEEECSS--E-EEEEEEEC----TT--TSC----HH
T ss_pred ccccccccccc-eEEEeecccCCcccCCC---ceeeeecCCceEEEccCCC--c-cceEEEEe----cC--CCC----hH
Confidence 1 011111 11111111000 00001 1112222333456666543 1 11111000 00 001 12
Q ss_pred HHHHHHHhhcC---CCCCCCCCeeeceeeee-ecCCCCeEecCCCCCCCCCEEEEeCCCCCCCccchHHHHHHHHHHhcC
Q 015088 301 SLKEWIQGRFA---GRVDSNGPVATQLCMYS-ITPDEDFVIDFLGGEFGEDVVVAGGFSGHGFKMAPAVGRILADLVLSG 376 (413)
Q Consensus 301 ~l~~~~~~~~p---~~~~~~~~~~~~~g~~~-~t~d~~p~ig~~~~~~~~~~~~~~G~~~~G~~~a~~~a~~la~~i~~g 376 (413)
...+.+.+.+. .+.+. ..+..+.+.++ +..++..+||... .....+.|.|+.++...|..||+.+.++
T Consensus 327 ~~~~~l~~~~~~~p~l~~~-~~i~~~~~~~~~~~~~rvvliGDAA-------h~~~P~~GqGi~~a~~da~~La~~L~~~ 398 (550)
T 2e4g_A 327 EAVREFCEMWHLDPETQPL-NRIRFRVGRNRRAWVGNCVSIGTSS-------CFVEPLESTGIYFVYAALYQLVKHFPDK 398 (550)
T ss_dssp HHHHHHHHHTTCCTTTSCC-EEEECCCEEESCSEETTEEECSTTT-------EECCGGGSCHHHHHHHHHHHHHHTCCCT
T ss_pred HHHHHHHHhhCcCcccCCC-ceEEecCCCccccccCCEEEEehhh-------cccCccchhhHHHHHHHHHHHHHhcccc
Confidence 22333334443 23321 23334455444 3345555665432 3445668999999999999999998744
Q ss_pred CCCcccccccc
Q 015088 377 EAQGVELQHFR 387 (413)
Q Consensus 377 ~~~~~~~~~~~ 387 (413)
......++.|+
T Consensus 399 ~~~~~~l~~Y~ 409 (550)
T 2e4g_A 399 SLNPVLTARFN 409 (550)
T ss_dssp TCCHHHHHHHH
T ss_pred CCCHHHHHHHH
Confidence 33233345553
No 46
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.51 E-value=1.4e-13 Score=133.14 Aligned_cols=58 Identities=16% Similarity=0.069 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCCh
Q 015088 153 TKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWV 213 (413)
Q Consensus 153 ~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s 213 (413)
..+.+.|.+.+++.|++|+++++|++|.. ++ ++...|++.+|+++.||.||.+++++.
T Consensus 221 ~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~--~~-~~~~gV~~~~g~~~~ad~VV~~a~~~~ 278 (501)
T 4dgk_A 221 GALVQGMIKLFQDLGGEVVLNARVSHMET--TG-NKIEAVHLEDGRRFLTQAVASNADVVH 278 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEE--ET-TEEEEEEETTSCEEECSCEEECCC---
T ss_pred cchHHHHHHHHHHhCCceeeecceeEEEe--eC-CeEEEEEecCCcEEEcCEEEECCCHHH
Confidence 67889999999999999999999999998 63 355668999999999999999999864
No 47
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.51 E-value=1e-13 Score=129.57 Aligned_cols=157 Identities=17% Similarity=0.112 Sum_probs=96.1
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCc-ccCCCceeecccCCCC--h---HHHHHHHHHHHHHHHH
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGS-SHGESRTIRATYPEDY--Y---HPMVLESCLLWEQAQS 80 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~gg~~~-s~~~~~~~~~~~~~~~--~---~~l~~~~~~~~~~~~~ 80 (413)
++||+|||||++|+++|+.|+++|.+|+|||++...++... +.+....+.+....+. + ..+..... .
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l-------~ 76 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSAL-------A 76 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHH-------H
T ss_pred CCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHH-------H
Confidence 68999999999999999999999999999999876532111 1110000111000000 0 00000000 0
Q ss_pred HhCCeeEEeeceeeeCCCChhhHHHHHHHHhhCCCCccccCHHHHHHHcCCcccCCCCeEEEEecCCceeChHHHHHHHH
Q 015088 81 EIGYKVYFKAHQFDMGPSENKSLRSVIASCRKNSVPHQVLDCRQVLEKYSGRIEIPENWVGVATELGGVIKPTKAVSMFQ 160 (413)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 160 (413)
. .......+++...|+++...+ ...++ +.. ++..+.+.|.
T Consensus 77 ~-------------------~~~~~~~~~~~~~Gi~~~~~~-----------------~g~~~-p~~---~~~~l~~~L~ 116 (401)
T 2gqf_A 77 R-------------------YTNWDFISLVAEQGITYHEKE-----------------LGQLF-CDE---GAEQIVEMLK 116 (401)
T ss_dssp H-------------------SCHHHHHHHHHHTTCCEEECS-----------------TTEEE-ETT---CTHHHHHHHH
T ss_pred h-------------------CCHHHHHHHHHhCCCceEECc-----------------CCEEc-cCC---CHHHHHHHHH
Confidence 0 001123344445555432110 11112 211 5678889999
Q ss_pred HHHHHCCCEEEcCceEEEEEEecccC--CCeEEEEcCCCcEEEcCEEEEcCCCCh
Q 015088 161 TLAIKNGAVLRDNMEVKTVLKVKDAV--KGGVTVVTSNGEKFWGKKCVVTAGAWV 213 (413)
Q Consensus 161 ~~~~~~Gv~i~~~~~V~~i~~~~~~~--~~~~~v~~~~g~~i~ad~VV~A~G~~s 213 (413)
+.+++.|++++++++|+++.. +++ ++.+.|.+.++ +++||.||+|+|.++
T Consensus 117 ~~~~~~Gv~i~~~~~v~~i~~--~~~g~~~~~~v~~~~g-~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 117 SECDKYGAKILLRSEVSQVER--IQNDEKVRFVLQVNST-QWQCKNLIVATGGLS 168 (401)
T ss_dssp HHHHHHTCEEECSCCEEEEEE--CCSCSSCCEEEEETTE-EEEESEEEECCCCSS
T ss_pred HHHHHCCCEEEeCCEEEEEEc--ccCcCCCeEEEEECCC-EEECCEEEECCCCcc
Confidence 999999999999999999987 521 23478888777 599999999999988
No 48
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=99.49 E-value=2.5e-13 Score=132.44 Aligned_cols=70 Identities=14% Similarity=0.203 Sum_probs=50.9
Q ss_pred eeChHHHHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcCC---C--cEEEcCEEEEcCCCChHHhhhhhcCC
Q 015088 149 VIKPTKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSN---G--EKFWGKKCVVTAGAWVGKLVKRITGL 223 (413)
Q Consensus 149 ~~~~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~---g--~~i~ad~VV~A~G~~s~~l~~~~~g~ 223 (413)
.++...+.+.|.+.+.+. |+++++|++++. + ++.+.+++.+ | ++++||+||.|+|.+|. +-+.+ |+
T Consensus 134 ~i~~~~l~~~L~~~a~~~---v~~~~~v~~~~~--~--~~~v~v~~~~~~~G~~~~i~a~~vVgADG~~S~-vR~~l-g~ 204 (549)
T 2r0c_A 134 ICPQHWLAPLLAEAVGER---LRTRSRLDSFEQ--R--DDHVRATITDLRTGATRAVHARYLVACDGASSP-TRKAL-GI 204 (549)
T ss_dssp ECCHHHHHHHHHHHHGGG---EECSEEEEEEEE--C--SSCEEEEEEETTTCCEEEEEEEEEEECCCTTCH-HHHHH-TC
T ss_pred ccCHHHHHHHHHHHHHHh---cccCcEEEEEEE--e--CCEEEEEEEECCCCCEEEEEeCEEEECCCCCcH-HHHHc-CC
Confidence 445567778888888776 899999999988 6 3456565443 6 37999999999999985 44444 65
Q ss_pred ccce
Q 015088 224 ELPI 227 (413)
Q Consensus 224 ~~~~ 227 (413)
..+-
T Consensus 205 ~~~g 208 (549)
T 2r0c_A 205 DAPP 208 (549)
T ss_dssp CCCB
T ss_pred CCCC
Confidence 5443
No 49
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.49 E-value=1.2e-12 Score=126.21 Aligned_cols=174 Identities=20% Similarity=0.250 Sum_probs=105.1
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCcccCCCceeecccCCCChHHHHHHHHHHHHHHH--HHhCC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESRTIRATYPEDYYHPMVLESCLLWEQAQ--SEIGY 84 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~gg~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~ 84 (413)
.+||+|||||++|+++|+.|+++|++|+|||++...+++. ......|.... .....
T Consensus 107 ~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~----------------------~~~~g~w~~~~~~~~~~i 164 (549)
T 3nlc_A 107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERT----------------------KDTFGFWRKRTLNPESNV 164 (549)
T ss_dssp CCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHH----------------------HHHHHHHHHCCCCTTSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccc----------------------cchhcccccccccccccc
Confidence 4899999999999999999999999999999976442100 00001111100 00000
Q ss_pred ee------EEeeceeeeCCCC-hhhHHHHHHHHhhCCCCccccCHHHHHHHcCCcccCCCCeEEEEecCCceeChHHHHH
Q 015088 85 KV------YFKAHQFDMGPSE-NKSLRSVIASCRKNSVPHQVLDCRQVLEKYSGRIEIPENWVGVATELGGVIKPTKAVS 157 (413)
Q Consensus 85 ~~------~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
.+ .+..+.+...... ........+.+...+.+...... . .+..+......+.+
T Consensus 165 ~~g~gGag~~sdgkl~~~i~~~~~~~~~v~~~~~~~G~~~~i~~~--------~------------~p~~G~~~~~~l~~ 224 (549)
T 3nlc_A 165 QFGEGGAGTFSDGKLYSQVKDPNFYGRKVITEFVEAGAPEEILYV--------S------------KPHIGTFKLVTMIE 224 (549)
T ss_dssp SSSTTGGGTTSCCCCCCCSCCTTCHHHHHHHHHHHTTCCGGGGTB--------S------------SCCCCHHHHHHHHH
T ss_pred eeccCCcccccCCceEEEeccccccHHHHHHHHHHcCCCceEeec--------c------------ccccccchHHHHHH
Confidence 00 0000011100000 11113344445555554322210 0 12224445678889
Q ss_pred HHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCChHH---hhhhhcCCccc
Q 015088 158 MFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWVGK---LVKRITGLELP 226 (413)
Q Consensus 158 ~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s~~---l~~~~~g~~~~ 226 (413)
.|.+.+++.|++++++++|++|.. ++ +..+.|.+.+|++++||.||+|+|.++.. ++... |+.+.
T Consensus 225 ~L~~~l~~~Gv~I~~~t~V~~I~~--~~-~~v~gV~l~~G~~i~Ad~VVlA~G~~s~~~~~~l~~~-Gi~~~ 292 (549)
T 3nlc_A 225 KMRATIIELGGEIRFSTRVDDLHM--ED-GQITGVTLSNGEEIKSRHVVLAVGHSARDTFEMLHER-GVYME 292 (549)
T ss_dssp HHHHHHHHTTCEEESSCCEEEEEE--SS-SBEEEEEETTSCEEECSCEEECCCTTCHHHHHHHHHT-TCCCE
T ss_pred HHHHHHHhcCCEEEeCCEEEEEEE--eC-CEEEEEEECCCCEEECCEEEECCCCChhhHHHHHHHc-CCCcc
Confidence 999999999999999999999988 62 24566888889889999999999999864 33433 55443
No 50
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=99.48 E-value=6.9e-12 Score=124.64 Aligned_cols=221 Identities=12% Similarity=0.078 Sum_probs=113.7
Q ss_pred eeChHHHHHHHHHHHHHCC---CEEEcCceEEEEEEecccC------CCeEEEEc-------------------------
Q 015088 149 VIKPTKAVSMFQTLAIKNG---AVLRDNMEVKTVLKVKDAV------KGGVTVVT------------------------- 194 (413)
Q Consensus 149 ~~~~~~~~~~l~~~~~~~G---v~i~~~~~V~~i~~~~~~~------~~~~~v~~------------------------- 194 (413)
.++...+.+.|.+.+.+.| ++++++++|++++. ++. +..+.++.
T Consensus 115 ~l~q~~le~~L~~~~~~~g~~~v~v~~g~~v~~~~~--d~~~~~~~~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (665)
T 1pn0_A 115 VLHQGRIERRILDSIAEISDTRIKVERPLIPEKMEI--DSSKAEDPEAYPVTMTLRYMSEDESTPLQFGHKTENGLFRSN 192 (665)
T ss_dssp ECCHHHHHHHHHHHHHHHHTTSSCEECSEEEEEEEE--CGGGTTCTTCCCEEEEEEECCGGGSCCCTTCCCCCSSSCCCH
T ss_pred EeeHHHHHHHHHHHHHhcCCCceEEEeCCEEEEEEe--cCcccccCCCCCEEEEEEeccccccccccccccccccccccc
Confidence 4566788889999988877 89999999999987 631 13455532
Q ss_pred -----------------CCC--cEEEcCEEEEcCCCChHHhhhhhcCCccceeEEEEEEEEEEecCCCCCccccCCCCCe
Q 015088 195 -----------------SNG--EKFWGKKCVVTAGAWVGKLVKRITGLELPIQAVETTVCYWRIKEGNEADYAVGGDFPS 255 (413)
Q Consensus 195 -----------------~~g--~~i~ad~VV~A~G~~s~~l~~~~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 255 (413)
.+| ++++||+||.|.|.+|. +-+.+ ++..+-.........+.+.... .+.. .....
T Consensus 193 l~~~~~~d~~~~~~~~~~~G~~~~i~A~~VVGADG~~S~-VR~~l-g~~~~g~~~~~~~~v~d~~~~~--~~p~-~~~~~ 267 (665)
T 1pn0_A 193 LQTQEEEDANYRLPEGKEAGEIETVHCKYVIGCDGGHSW-VRRTL-GFEMIGEQTDYIWGVLDAVPAS--NFPD-IRSRC 267 (665)
T ss_dssp HHHHHHHHTSCCCSTTCCTTCEEEEEEEEEEECCCTTCH-HHHHH-TCCCEEEEEEEEEEEEEEEEEC--CCTT-TTSEE
T ss_pred ccccccccccccccccCCCCceEEEEeCEEEeccCCCCH-HHHhc-CCCCCCCCccEEEEEEEEEECC--CCCC-cceEE
Confidence 245 47999999999999884 43444 7655444333322222221100 1110 01112
Q ss_pred EEEc-CCCceEecCCCCCCCcEEEecC-CCCCCC---CCCCCCCCchhHHHHHHHHHhhcCCCC-CCCCCeeeceeeee-
Q 015088 256 FASY-GDPYIYGTPSLEYPGLIKIALH-GGYPCD---PDRRPWGPGLLLDSLKEWIQGRFAGRV-DSNGPVATQLCMYS- 328 (413)
Q Consensus 256 ~~~~-~~~~~y~~p~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~p~~~-~~~~~~~~~~g~~~- 328 (413)
.... ....+.+.|..+ +.+.+... .....+ ...... ..+.+.+.+++.+.... .. ..+ .|...++
T Consensus 268 ~~~~~~~g~~~~~P~~~--~~~r~~~~~~~~~~~~~~~~~~~~----t~e~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~ 339 (665)
T 1pn0_A 268 AIHSAESGSIMIIPREN--NLVRFYVQLQARAEKGGRVDRTKF----TPEVVIANAKKIFHPYTFDV-QQL-DWFTAYHI 339 (665)
T ss_dssp EEECSSSCEEEEEECST--TCEEEEEEECC----------CCC----CHHHHHHHHHHHHTTSCCEE-EEE-EEEEEEEE
T ss_pred EEEeCCCceEEEEEcCC--CEEEEEEEeCCccccccccCcCCC----CHHHHHHHHHHHhCcccCce-eeE-EEEEeeec
Confidence 2221 234456666644 33332211 111000 001111 34566666766664322 11 112 2333222
Q ss_pred -------ec-CCCCeEecCCCCCCCCCEEEEeCCCCCCCccchHHHH----HHHHHHhcCCCCccccccccccccc
Q 015088 329 -------IT-PDEDFVIDFLGGEFGEDVVVAGGFSGHGFKMAPAVGR----ILADLVLSGEAQGVELQHFRISRFK 392 (413)
Q Consensus 329 -------~t-~d~~p~ig~~~~~~~~~~~~~~G~~~~G~~~a~~~a~----~la~~i~~g~~~~~~~~~~~~~R~~ 392 (413)
+. .++..++|. -.+...-++|.|+.+|..-|. .|+..+. |......++.|.-+|..
T Consensus 340 ~~r~a~~~~~~gRV~L~GD-------AAH~~~P~~GqG~N~gi~DA~nLawkLa~vl~-g~a~~~lL~tYe~eR~p 407 (665)
T 1pn0_A 340 GQRVTEKFSKDERVFIAGD-------ACHTHSPKAGQGMNTSMMDTYNLGWKLGLVLT-GRAKRDILKTYEEERQP 407 (665)
T ss_dssp EEEECSCSEETTTEEECGG-------GTEECCSTTCCHHHHHHHHHHHHHHHHHHHHT-TCBCGGGGHHHHHHHHH
T ss_pred cceehhhcccCCCEEEEEC-------ccccCCCcccCCcchhHHHHHHHHHHHHHHHc-CCCcHHHHHHHHHHHHH
Confidence 12 233444443 345666778888888776664 4455543 55444457777766643
No 51
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.48 E-value=1.1e-12 Score=128.36 Aligned_cols=197 Identities=17% Similarity=0.158 Sum_probs=105.3
Q ss_pred CCCCCCcccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCcccCCCceeecccCC-CChHHHHHHHHHHHHHHH
Q 015088 1 MEFPGEKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESRTIRATYPE-DYYHPMVLESCLLWEQAQ 79 (413)
Q Consensus 1 m~~~~~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~gg~~~s~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~ 79 (413)
|...+.++||+|||||++|+++|+.|+++|.+|+||||....++ .++...+++....... ...... .+.+..
T Consensus 1 m~~~~~~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~~~g-~s~~a~GGi~~~~~~~~~ds~~~------~~~d~~ 73 (588)
T 2wdq_A 1 MKLPVREFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRS-HTVSAQGGITVALGNTHEDNWEW------HMYDTV 73 (588)
T ss_dssp CCSCEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGS-GGGGCCSCEECCCCSSSCCCHHH------HHHHHH
T ss_pred CCCccccCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCCCC-cchhhCCccEEcCCCCCCCCHHH------HHHHHH
Confidence 55555679999999999999999999999999999999876532 1222222222111110 111110 111111
Q ss_pred HHhCCeeEEeeceeeeCCCChhhHHHHHHHHhhCCCCccccCHHHHH-HHcCCcccCC----CCeEEEEecCCceeChHH
Q 015088 80 SEIGYKVYFKAHQFDMGPSENKSLRSVIASCRKNSVPHQVLDCRQVL-EKYSGRIEIP----ENWVGVATELGGVIKPTK 154 (413)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 154 (413)
...... .....+.. -.......++++...|+++.......+. ..++. .... ......+.. ...+..
T Consensus 74 ~~g~~~--~d~~~v~~---~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~~g-~~~~~~~~~~~r~~~~~---d~~g~~ 144 (588)
T 2wdq_A 74 KGSDYI--GDQDAIEY---MCKTGPEAILELEHMGLPFSRLDDGRIYQRPFGG-QSKNFGGEQAARTAAAA---DRTGHA 144 (588)
T ss_dssp HHTTTC--SCHHHHHH---HHHHHHHHHHHHHHTTCCCCBCTTSSBCEECCTT-CBSTTTCSBCCCEECST---TCHHHH
T ss_pred HhcCCC--CCHHHHHH---HHHhHHHHHHHHHHcCCCcccCCCCcEeeeecCC-ccccccccCcceEEEcC---CCCHHH
Confidence 110000 00000000 0001123445566677665432211100 00111 0000 011111111 113467
Q ss_pred HHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEE---cCCCc--EEEcCEEEEcCCCChHH
Q 015088 155 AVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVV---TSNGE--KFWGKKCVVTAGAWVGK 215 (413)
Q Consensus 155 ~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~---~~~g~--~i~ad~VV~A~G~~s~~ 215 (413)
+...|.+.+++.|++|+++++|++|.. ++++..+.|. +.+|+ ++.|+.||+|+|+++..
T Consensus 145 l~~~L~~~~~~~gv~i~~~~~v~~L~~--~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~~~ 208 (588)
T 2wdq_A 145 LLHTLYQQNLKNHTTIFSEWYALDLVK--NQDGAVVGCTALCIETGEVVYFKARATVLATGGAGRI 208 (588)
T ss_dssp HHHHHHHHHHHTTCEEEETEEEEEEEE--CTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCCGGG
T ss_pred HHHHHHHHHHhCCCEEEeCcEEEEEEE--CCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCCccc
Confidence 889999999999999999999999987 5223333333 25665 68999999999998754
No 52
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.47 E-value=3.9e-13 Score=126.21 Aligned_cols=71 Identities=10% Similarity=-0.004 Sum_probs=58.4
Q ss_pred ceeChHHHHHHHHHHHHHC-CCEEEcCceEEEEEEecccCCCeE--EEEcCCCcEEEcCEEEEcCCCChHHhhhhhcCCc
Q 015088 148 GVIKPTKAVSMFQTLAIKN-GAVLRDNMEVKTVLKVKDAVKGGV--TVVTSNGEKFWGKKCVVTAGAWVGKLVKRITGLE 224 (413)
Q Consensus 148 ~~~~~~~~~~~l~~~~~~~-Gv~i~~~~~V~~i~~~~~~~~~~~--~v~~~~g~~i~ad~VV~A~G~~s~~l~~~~~g~~ 224 (413)
..++...+.+.|.+.+++. |++++++++|++++. + ++.+ .|++.+|+++++|.||.|+|.++. +.+.+ +..
T Consensus 102 ~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~--~--~~~v~g~v~~~~g~~~~ad~vV~AdG~~s~-vr~~l-g~~ 175 (399)
T 2x3n_A 102 ILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQR--D--ERHAIDQVRLNDGRVLRPRVVVGADGIASY-VRRRL-LDI 175 (399)
T ss_dssp EECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEE--C--TTSCEEEEEETTSCEEEEEEEEECCCTTCH-HHHHT-SCC
T ss_pred ccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEE--c--CCceEEEEEECCCCEEECCEEEECCCCChH-HHHHh-CCC
Confidence 4567889999999999988 999999999999988 6 3456 788888888999999999999985 44443 544
No 53
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.47 E-value=3.3e-13 Score=130.56 Aligned_cols=58 Identities=21% Similarity=0.276 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcC-CCc--EEEcC-EEEEcCCCCh
Q 015088 154 KAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTS-NGE--KFWGK-KCVVTAGAWV 213 (413)
Q Consensus 154 ~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~-~g~--~i~ad-~VV~A~G~~s 213 (413)
.+...|.+.+++.|++|+++++|++|.. ++++..+.|.+. +++ +++|+ .||+|+|+++
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~--~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVT--DDTGRVVGIVAKQYGKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEE--CTTCCEEEEEEEETTEEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEE--CCCCcEEEEEEEECCcEEEEEeCCeEEEeCCChh
Confidence 8899999999999999999999999988 633344444432 332 68995 9999999987
No 54
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.44 E-value=7.1e-11 Score=107.97 Aligned_cols=40 Identities=30% Similarity=0.385 Sum_probs=36.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCc
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGS 47 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~gg~~~ 47 (413)
+||+|||||++|+++|+.|+++|++|+|||+....++...
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~ 42 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMS 42 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGC
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccce
Confidence 6999999999999999999999999999999987765443
No 55
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=99.43 E-value=4.5e-12 Score=125.18 Aligned_cols=61 Identities=13% Similarity=0.212 Sum_probs=47.8
Q ss_pred hHHHHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCe--EEEE-cCCCc--EEEcCEEEEcCCCChHH
Q 015088 152 PTKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGG--VTVV-TSNGE--KFWGKKCVVTAGAWVGK 215 (413)
Q Consensus 152 ~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~--~~v~-~~~g~--~i~ad~VV~A~G~~s~~ 215 (413)
+..+...|.+.+.+.|++|++++.|++|.. ++ +.. +.+. +.+|+ .+.|+.||+|||+++..
T Consensus 157 G~~l~~~L~~~a~~~gv~i~~~~~v~~L~~--~~-g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~ 222 (660)
T 2bs2_A 157 GHTMLFAVANECLKLGVSIQDRKEAIALIH--QD-GKCYGAVVRDLVTGDIIAYVAKGTLIATGGYGRI 222 (660)
T ss_dssp HHHHHHHHHHHHHHHTCEEECSEEEEEEEE--ET-TEEEEEEEEETTTCCEEEEECSEEEECCCCCGGG
T ss_pred HHHHHHHHHHHHHhCCCEEEECcEEEEEEe--cC-CEEEEEEEEECCCCcEEEEEcCEEEEccCcchhh
Confidence 457889999999889999999999999987 53 232 3332 35675 58999999999998843
No 56
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.43 E-value=3.4e-12 Score=119.57 Aligned_cols=61 Identities=11% Similarity=-0.107 Sum_probs=49.1
Q ss_pred ChHHHHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEc-CCCc--EEEcCEEEEcCCCChH
Q 015088 151 KPTKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVT-SNGE--KFWGKKCVVTAGAWVG 214 (413)
Q Consensus 151 ~~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~-~~g~--~i~ad~VV~A~G~~s~ 214 (413)
+...+.+.|.+.+.+.|++++++++|+++.. +++ +.+.|++ .+|+ +++||.||.|+|.+|.
T Consensus 101 ~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~--~~~-~~~~v~~~~~g~~~~~~a~~vV~AdG~~S~ 164 (394)
T 1k0i_A 101 GQTEVTRDLMEAREACGATTVYQAAEVRLHD--LQG-ERPYVTFERDGERLRLDCDYIAGCDGFHGI 164 (394)
T ss_dssp CHHHHHHHHHHHHHHTTCEEESSCEEEEEEC--TTS-SSCEEEEEETTEEEEEECSEEEECCCTTCS
T ss_pred chHHHHHHHHHHHHhcCCeEEeceeEEEEEE--ecC-CceEEEEecCCcEEEEEeCEEEECCCCCcH
Confidence 4467778888888888999999999999987 532 3455665 5776 6999999999999885
No 57
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=99.43 E-value=4.1e-12 Score=123.40 Aligned_cols=65 Identities=12% Similarity=0.137 Sum_probs=53.9
Q ss_pred CceeChHHHHHHHHHHHHH-CCCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCChH
Q 015088 147 GGVIKPTKAVSMFQTLAIK-NGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWVG 214 (413)
Q Consensus 147 ~~~~~~~~~~~~l~~~~~~-~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s~ 214 (413)
...++...+.+.|.+.+++ .|++++++ +|+++.. ++++..+.|.+.+|.+++||.||.|+|.++.
T Consensus 169 ~~~~~r~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~--~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~ 234 (526)
T 2pyx_A 169 GYHLNAAKFSQLLTEHCTQKLGVTHIRD-HVSQIIN--NQHGDIEKLITKQNGEISGQLFIDCTGAKSL 234 (526)
T ss_dssp EEEECHHHHHHHHHHHHHHTSCCEEEEC-CEEEEEE--CTTSCEEEEEESSSCEEECSEEEECSGGGCC
T ss_pred eEEEcHHHHHHHHHHHHHhcCCCEEEEe-EEEEEEe--cCCCcEEEEEECCCCEEEcCEEEECCCcchH
Confidence 3567889999999999999 89999999 6999987 6333456777877767999999999999874
No 58
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.42 E-value=7.1e-13 Score=128.68 Aligned_cols=49 Identities=29% Similarity=0.403 Sum_probs=41.9
Q ss_pred CCCCCCcccEEEECCCHHHHHHHHHHHHc-CCcEEEEcccCCCCCCCccc
Q 015088 1 MEFPGEKFDVIVVGAGIMGSSAAYQLAKR-GQKTLLLEQFDFLHHRGSSH 49 (413)
Q Consensus 1 m~~~~~~~dvvIIGaG~aG~~~A~~L~~~-g~~V~liE~~~~~gg~~~s~ 49 (413)
|+..+.++||||||||++||+||++|+++ |++|+|+|+++.+||...|.
T Consensus 4 Ms~p~~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~~~T~ 53 (513)
T 4gde_A 4 MTHPDISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLASTD 53 (513)
T ss_dssp --CCSEEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGGGCEE
T ss_pred CCCCCCCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCCeeeE
Confidence 44455679999999999999999999985 99999999999999877663
No 59
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.42 E-value=1.1e-11 Score=121.37 Aligned_cols=189 Identities=17% Similarity=0.166 Sum_probs=102.5
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCcccCCCceeecccCCC-ChHHHHHHHHHHHHHHHHHhCC
Q 015088 6 EKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESRTIRATYPED-YYHPMVLESCLLWEQAQSEIGY 84 (413)
Q Consensus 6 ~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~gg~~~s~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~ 84 (413)
..+||+|||+|++|+++|+.|+++|++|+|+|+....++.. ....+.+....... ....+......++..+.+. +.
T Consensus 125 ~~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~--~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~-g~ 201 (572)
T 1d4d_A 125 ETTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNT--KLAAGGMNAAETKPQAKLGIEDKKQIMIDDTMKG-GR 201 (572)
T ss_dssp EECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTG--GGCCSCEECCSSSTTGGGTCCCCTHHHHHHHHHH-TT
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcch--hhhCCeeEccCCHHHHHhCCCCCHHHHHHHHHHh-cC
Confidence 36799999999999999999999999999999998775432 21222221111100 0000000000111111111 10
Q ss_pred eeEEeeceeeeCCCChhhHHHHHHHHhhCCCCccccCHHHHHHHcCCcccCCCCeEEEEecCCceeChHHHHHHHHHHHH
Q 015088 85 KVYFKAHQFDMGPSENKSLRSVIASCRKNSVPHQVLDCRQVLEKYSGRIEIPENWVGVATELGGVIKPTKAVSMFQTLAI 164 (413)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 164 (413)
.. .....+.. -.+.....++++...|+++..+. .... ......+.+.++......+...|.+.++
T Consensus 202 ~~-~~~~~v~~---~~~~~~~~i~~l~~~Gv~~~~~~------~~gg-----~~~~r~~~~~~~~~~g~~l~~~L~~~~~ 266 (572)
T 1d4d_A 202 NI-NDPELVKV---LANNSSDSIDWLTSMGADMTDVG------RMGG-----ASVNRSHRPTGGAGVGAHVAQVLWDNAV 266 (572)
T ss_dssp TC-SCHHHHHH---HHHTHHHHHHHHHHHTCCCCEEE------CCTT-----CSSCCEEESTTTCCHHHHHHHHHHHHHH
T ss_pred CC-CCHHHHHH---HHHccHHHHHHHHhcCCcccccc------ccCC-----CcCCeeEecCCCCCCHHHHHHHHHHHHH
Confidence 00 00000000 00011233444555555542211 0011 0111122333444556788999999999
Q ss_pred HCCCEEEcCceEEEEEEecccCCCe--EEEEcCCCc--EEEcCEEEEcCCCChH
Q 015088 165 KNGAVLRDNMEVKTVLKVKDAVKGG--VTVVTSNGE--KFWGKKCVVTAGAWVG 214 (413)
Q Consensus 165 ~~Gv~i~~~~~V~~i~~~~~~~~~~--~~v~~~~g~--~i~ad~VV~A~G~~s~ 214 (413)
+.|++|+++++|++|.. ++++.. +.+.+.+|+ ++.||.||+|+|+++.
T Consensus 267 ~~gv~i~~~t~v~~l~~--~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~~ 318 (572)
T 1d4d_A 267 KRGTDIRLNSRVVRILE--DASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFAK 318 (572)
T ss_dssp HTTCEEESSEEEEEEEE--C--CCEEEEEEEETTTEEEEEECSEEEECCCCCTT
T ss_pred HcCCeEEecCEEEEEEE--CCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCcc
Confidence 99999999999999987 631233 344444664 6899999999999874
No 60
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.41 E-value=2.2e-12 Score=125.09 Aligned_cols=186 Identities=15% Similarity=0.110 Sum_probs=89.2
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCcccCCCceeecccCCCChHHHHHHHHH-HHHHHHHHhC
Q 015088 5 GEKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESRTIRATYPEDYYHPMVLESCL-LWEQAQSEIG 83 (413)
Q Consensus 5 ~~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~gg~~~s~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~ 83 (413)
+..+||+|||||++|+++|+.|++ |.+|+||||....++ ++....+.+....... .+.+ .+.+......
T Consensus 6 ~~~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~g--~s~~a~Ggi~~~~~~~-------ds~~~~~~d~l~~g~ 75 (540)
T 1chu_A 6 EHSCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTEG--STFYAQGGIAAVFDET-------DSIDSHVEDTLIAGA 75 (540)
T ss_dssp SEECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC---------------CCSH-------HHHHHHHHHHHHHTT
T ss_pred CCCCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCCC--ChhhcCCCEEEecCCC-------CCHHHHHHHHHHhhc
Confidence 457899999999999999999999 999999999876542 2222223222221110 1111 1111111110
Q ss_pred CeeEEeeceeeeCCCChhhHHHHHHHHhhCCCCccccC----HHHH-HHHcCCcccCCCCeEEEEecCCceeChHHHHHH
Q 015088 84 YKVYFKAHQFDMGPSENKSLRSVIASCRKNSVPHQVLD----CRQV-LEKYSGRIEIPENWVGVATELGGVIKPTKAVSM 158 (413)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (413)
..+ ....+.. -.......++++...|+++.... ..++ ....+. .. ....++. ....+..+.+.
T Consensus 76 g~~--d~~~v~~---~~~~~~~~i~~l~~~Gv~f~~~~~~~~~g~~~~~~~gg-~~---~~r~~~~---~d~~g~~l~~~ 143 (540)
T 1chu_A 76 GIC--DRHAVEF---VASNARSCVQWLIDQGVLFDTHIQPNGEESYHLTREGG-HS---HRRILHA---ADATGREVETT 143 (540)
T ss_dssp TCC--CHHHHHH---HHHHHHHHHHHHHHTTCC---------------------------------------------CC
T ss_pred ccC--CHHHHHH---HHHhHHHHHHHHHHcCCCcccCcccCcCCccccccccc-cc---cCeEEEe---CCCCHHHHHHH
Confidence 000 0000000 00011234556666777654322 1111 011111 00 0000010 11233567778
Q ss_pred HHHHHHH-CCCEEEcCceEEEEEEecccCC------CeEEEEc---CCCc--EEEcCEEEEcCCCChH
Q 015088 159 FQTLAIK-NGAVLRDNMEVKTVLKVKDAVK------GGVTVVT---SNGE--KFWGKKCVVTAGAWVG 214 (413)
Q Consensus 159 l~~~~~~-~Gv~i~~~~~V~~i~~~~~~~~------~~~~v~~---~~g~--~i~ad~VV~A~G~~s~ 214 (413)
|.+.+++ .|++|+++++|++|.. ++++ ..+.|.+ .+|+ ++.|+.||+|+|+++.
T Consensus 144 L~~~~~~~~gv~i~~~~~v~~L~~--~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~ 209 (540)
T 1chu_A 144 LVSKALNHPNIRVLERTNAVDLIV--SDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGASK 209 (540)
T ss_dssp CHHHHHHCTTEEEECSEEEEEEEE--GGGTTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCCGG
T ss_pred HHHHHHcCCCCEEEeCcEEEEEEE--cCCCCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCccc
Confidence 8888888 6999999999999987 5323 3333433 3565 6899999999999885
No 61
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.41 E-value=1.3e-12 Score=120.60 Aligned_cols=136 Identities=16% Similarity=0.239 Sum_probs=91.5
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCcccCCCceeecccCCCChHHHHHHHHHHHHHHHHHhCCee
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESRTIRATYPEDYYHPMVLESCLLWEQAQSEIGYKV 86 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~gg~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 86 (413)
++||+|||||++|+++|+.|+++|++|+|||++...|+.... .++. ..
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~---------~~~~----------------------~~- 50 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQH---------AWHS----------------------LH- 50 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGG---------SCTT----------------------CB-
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccC---------CCCC----------------------cE-
Confidence 589999999999999999999999999999998766422100 0000 00
Q ss_pred EEeeceeeeCCCChhhHHHHHHHHhhCCCCccccCHHHHHHHcCCcccCCCCeEEEEecCCceeChHHHHHHHHHHHHHC
Q 015088 87 YFKAHQFDMGPSENKSLRSVIASCRKNSVPHQVLDCRQVLEKYSGRIEIPENWVGVATELGGVIKPTKAVSMFQTLAIKN 166 (413)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 166 (413)
..... .... ++. +..+ ...........+...+.+.+++.
T Consensus 51 --------~~~~~-----------~~~~--------------~~~-~~~~-------~~~~~~~~~~~~~~~l~~~~~~~ 89 (357)
T 4a9w_A 51 --------LFSPA-----------GWSS--------------IPG-WPMP-------ASQGPYPARAEVLAYLAQYEQKY 89 (357)
T ss_dssp --------CSSCG-----------GGSC--------------CSS-SCCC-------CCSSSSCBHHHHHHHHHHHHHHT
T ss_pred --------ecCch-----------hhhh--------------CCC-CCCC-------CCccCCCCHHHHHHHHHHHHHHc
Confidence 00000 0000 000 0000 01112233467788888888999
Q ss_pred CCEEEcCceEEEEEEecccCCCeEE-EEcCCCcEEEcCEEEEcCCCChHHhhhhh
Q 015088 167 GAVLRDNMEVKTVLKVKDAVKGGVT-VVTSNGEKFWGKKCVVTAGAWVGKLVKRI 220 (413)
Q Consensus 167 Gv~i~~~~~V~~i~~~~~~~~~~~~-v~~~~g~~i~ad~VV~A~G~~s~~l~~~~ 220 (413)
|++++++++|+++.. + ++.+. |.+.+| ++++|+||+|+|.++....+.+
T Consensus 90 ~~~~~~~~~v~~i~~--~--~~~~~~v~~~~g-~~~~d~vV~AtG~~~~~~~~~~ 139 (357)
T 4a9w_A 90 ALPVLRPIRVQRVSH--F--GERLRVVARDGR-QWLARAVISATGTWGEAYTPEY 139 (357)
T ss_dssp TCCEECSCCEEEEEE--E--TTEEEEEETTSC-EEEEEEEEECCCSGGGBCCCCC
T ss_pred CCEEEcCCEEEEEEE--C--CCcEEEEEeCCC-EEEeCEEEECCCCCCCCCCCCC
Confidence 999999999999988 6 56788 999888 5999999999998876544333
No 62
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.41 E-value=9.6e-13 Score=120.81 Aligned_cols=159 Identities=16% Similarity=0.113 Sum_probs=87.2
Q ss_pred ccEEEECCCHHHHHHHHHHHH---cCCcEEEEcccCCCCCCCcccCCCceeecccCCCChHHHHHHHHHHHHHHHHHhCC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAK---RGQKTLLLEQFDFLHHRGSSHGESRTIRATYPEDYYHPMVLESCLLWEQAQSEIGY 84 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~---~g~~V~liE~~~~~gg~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 84 (413)
+||+|||||++|+++|+.|++ +|++|+|+||+...|++.++...... . +.
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~~~~~~~~~-----~----------------------~~ 54 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRMTTACSPHN-----P----------------------QC 54 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGGCEEECSSC-----T----------------------TC
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCccceeeeecCCC-----C----------------------Cc
Confidence 589999999999999999999 99999999998877654333211000 0 00
Q ss_pred eeEEeeceeeeCCCChhhHHHHHHHHhhCCCCccccCHHHHHHHcCCcccCCCCeEEEEecCCceeChHHHHHHHHHHHH
Q 015088 85 KVYFKAHQFDMGPSENKSLRSVIASCRKNSVPHQVLDCRQVLEKYSGRIEIPENWVGVATELGGVIKPTKAVSMFQTLAI 164 (413)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 164 (413)
.+......+.........+...++.+...+....+... ... ...... ...+....+. ..+.+.+.+.
T Consensus 55 ~~d~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~------~~~-~~~~~~-~~~~~~~~g~---~~l~~~l~~~-- 121 (342)
T 3qj4_A 55 TADLGAQYITCTPHYAKKHQRFYDELLAYGVLRPLSSP------IEG-MVMKEG-DCNFVAPQGI---SSIIKHYLKE-- 121 (342)
T ss_dssp EEESSCCCEEECSSHHHHTHHHHHHHHHTTSCEECCSC------EET-CCC--C-CEEEECTTCT---THHHHHHHHH--
T ss_pred eEecCCceEEcCchHHHHHHHHHHHHHhCCCeecCchh------hcc-eeccCC-ccceecCCCH---HHHHHHHHHh--
Confidence 00000000111111111122222322222221111000 000 000000 1122222222 3444444443
Q ss_pred HCCCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCC
Q 015088 165 KNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGA 211 (413)
Q Consensus 165 ~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~ 211 (413)
.|++|+++++|++|.. + +++|.|.+.+|+++++|.||+|+.+
T Consensus 122 -~g~~i~~~~~V~~i~~--~--~~~~~v~~~~g~~~~ad~vV~A~p~ 163 (342)
T 3qj4_A 122 -SGAEVYFRHRVTQINL--R--DDKWEVSKQTGSPEQFDLIVLTMPV 163 (342)
T ss_dssp -HTCEEESSCCEEEEEE--C--SSSEEEEESSSCCEEESEEEECSCH
T ss_pred -cCCEEEeCCEEEEEEE--c--CCEEEEEECCCCEEEcCEEEECCCH
Confidence 3899999999999988 6 4678899988877899999999985
No 63
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=99.39 E-value=8e-12 Score=122.56 Aligned_cols=189 Identities=13% Similarity=0.177 Sum_probs=101.4
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCcccCCCceeecccC---CCChHHHHHHHHHHHHHHHHHh
Q 015088 6 EKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESRTIRATYP---EDYYHPMVLESCLLWEQAQSEI 82 (413)
Q Consensus 6 ~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~gg~~~s~~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~ 82 (413)
..+||||||||++|+++|+.|+++|.+|+||||....++ .+....+.+..... ........ .+.+....
T Consensus 17 ~~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~~~~g--~s~~a~GGi~a~~~~~~~ds~~~~~------~dtl~~g~ 88 (621)
T 2h88_A 17 HEFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRS--HTVAAQGGINAALGNMEDDNWRWHF------YDTVKGSD 88 (621)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGS--GGGGCCSCEECCCCSSSCCCHHHHH------HHHHHHTT
T ss_pred ccCCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCCC--CchhhCCCcEecCCCCCCCCHHHHH------HHHHHhcC
Confidence 458999999999999999999999999999999876532 22222222222111 11111110 01111100
Q ss_pred CCeeEEeeceeeeCCCChhhHHHHHHHHhhCCCCccccCHHHHH-HHcCCcccCC-----CCeEEEEecCCceeChHHHH
Q 015088 83 GYKVYFKAHQFDMGPSENKSLRSVIASCRKNSVPHQVLDCRQVL-EKYSGRIEIP-----ENWVGVATELGGVIKPTKAV 156 (413)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 156 (413)
+. .....+.. -.......++++..+|+++.......+. ..++. ...+ ......+.. ...+..+.
T Consensus 89 ~l---~d~~~v~~---l~~~s~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg-~s~~~g~~~~~~R~~~~~---d~tG~~l~ 158 (621)
T 2h88_A 89 WL---GDQDAIHY---MTEQAPAAVIELENYGMPFSRTEEGKIYQRAFGG-QSLQFGKGGQAHRCCCVA---DRTGHSLL 158 (621)
T ss_dssp TC---SCHHHHHH---HHHHHHHHHHHHHHTTCCCCBCTTSSBCEECCTT-CBSTTTTSCBCCCEECST---TCHHHHHH
T ss_pred CC---CCHHHHHH---HHHHHHHHHHHHHHcCCCcccCCCCceeccccCc-ccccccCCCcceeEEEec---CCCHHHHH
Confidence 00 00000000 0001123455566677765432211110 11111 0000 000111111 11346788
Q ss_pred HHHHHHHHHCCCEEEcCceEEEEEEecccCCCeE--EEEc-CCCc--EEEcCEEEEcCCCChHH
Q 015088 157 SMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGV--TVVT-SNGE--KFWGKKCVVTAGAWVGK 215 (413)
Q Consensus 157 ~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~--~v~~-~~g~--~i~ad~VV~A~G~~s~~ 215 (413)
..|.+.+.+.|++|++++.|++|.. ++ +... .+.. .+|+ .+.|+.||+|+|+++..
T Consensus 159 ~~L~~~~~~~gv~i~~~~~v~~Li~--~~-g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~ 219 (621)
T 2h88_A 159 HTLYGRSLRYDTSYFVEYFALDLLM--EN-GECRGVIALCIEDGTIHRFRAKNTVIATGGYGRT 219 (621)
T ss_dssp HHHHHHHTTSCCEEEETEEEEEEEE--ET-TEEEEEEEEETTTCCEEEEEEEEEEECCCCCGGG
T ss_pred HHHHHHHHhCCCEEEEceEEEEEEE--EC-CEEEEEEEEEcCCCcEEEEEcCeEEECCCccccc
Confidence 9999999889999999999999987 63 2333 3332 4665 68999999999998853
No 64
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.38 E-value=6.4e-12 Score=117.75 Aligned_cols=58 Identities=12% Similarity=-0.018 Sum_probs=47.3
Q ss_pred ChHHHHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCChH
Q 015088 151 KPTKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWVG 214 (413)
Q Consensus 151 ~~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s~ 214 (413)
+...+.+.|.+.+ .|++++++++|+++.. + ++.+.|++.+|+++++|.||.|+|.+|.
T Consensus 97 ~~~~l~~~L~~~~--~~~~i~~~~~v~~i~~--~--~~~v~v~~~~g~~~~ad~vV~AdG~~S~ 154 (397)
T 2vou_A 97 SYDSIYGGLYELF--GPERYHTSKCLVGLSQ--D--SETVQMRFSDGTKAEANWVIGADGGASV 154 (397)
T ss_dssp EHHHHHHHHHHHH--CSTTEETTCCEEEEEE--C--SSCEEEEETTSCEEEESEEEECCCTTCH
T ss_pred CHHHHHHHHHHhC--CCcEEEcCCEEEEEEe--c--CCEEEEEECCCCEEECCEEEECCCcchh
Confidence 3355666666654 5899999999999988 6 4568888888988999999999999884
No 65
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=99.37 E-value=2.2e-12 Score=122.84 Aligned_cols=61 Identities=15% Similarity=0.037 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHHCCCEEEcCceEEEEEEeccc-CCCeEEEEcCCCcEEEcCEEEEcCCCChHHh
Q 015088 153 TKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDA-VKGGVTVVTSNGEKFWGKKCVVTAGAWVGKL 216 (413)
Q Consensus 153 ~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~-~~~~~~v~~~~g~~i~ad~VV~A~G~~s~~l 216 (413)
..+.+.|.+.+++.|++++++++|++|.. +. ++..+.|++ +|++++||.||+|+|.|+..+
T Consensus 242 ~~l~~al~~~~~~~G~~i~~~~~V~~i~~--~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~~~~l 303 (453)
T 2bcg_G 242 GELPQGFARLSAIYGGTYMLDTPIDEVLY--KKDTGKFEGVKT-KLGTFKAPLVIADPTYFPEKC 303 (453)
T ss_dssp THHHHHHHHHHHHTTCEEECSCCCCEEEE--ETTTTEEEEEEE-TTEEEECSCEEECGGGCGGGE
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEE--ECCCCeEEEEEE-CCeEEECCEEEECCCccchhh
Confidence 58899999999999999999999999988 61 234456766 467799999999999997543
No 66
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.37 E-value=1.2e-11 Score=121.37 Aligned_cols=188 Identities=12% Similarity=0.043 Sum_probs=100.0
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHcC--CcEEEEcccCCCCCCCcccCCCceeecccCCCChHHHHHHHHHHHHHHHHHh
Q 015088 5 GEKFDVIVVGAGIMGSSAAYQLAKRG--QKTLLLEQFDFLHHRGSSHGESRTIRATYPEDYYHPMVLESCLLWEQAQSEI 82 (413)
Q Consensus 5 ~~~~dvvIIGaG~aG~~~A~~L~~~g--~~V~liE~~~~~gg~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 82 (413)
+.++||+|||||++|+++|+.|+++| .+|+||||....++ .++...+++.. .......... ...+.+....
T Consensus 3 ~~~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~~~-~s~~a~GGi~~-~~~~~ds~~~-----~~~d~~~~g~ 75 (602)
T 1kf6_A 3 TFQADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRS-HTVAAEGGSAA-VAQDHDSFEY-----HFHDTVAGGD 75 (602)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGGGS-GGGGCCSCEEC-CCSTTCCHHH-----HHHHHHHHTT
T ss_pred cccCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCCCC-hHHHhcCccEE-eCCCCCCHHH-----HHHHHHHhcC
Confidence 34689999999999999999999999 99999999865532 12222223221 1111111110 0001111000
Q ss_pred CCeeEEeeceeeeCCCChhhHHHHHHHHhhCCCCccccCHHHH-HHHcCCcccCCCCeEEEEecCCceeChHHHHHHHHH
Q 015088 83 GYKVYFKAHQFDMGPSENKSLRSVIASCRKNSVPHQVLDCRQV-LEKYSGRIEIPENWVGVATELGGVIKPTKAVSMFQT 161 (413)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 161 (413)
+. .....+.. -.......++++..+|+++.......+ ...+++ .......+.. ......+...|.+
T Consensus 76 ~~---~d~~~v~~---~~~~~~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg----~~~~r~~~~~---d~tg~~l~~~L~~ 142 (602)
T 1kf6_A 76 WL---CEQDVVDY---FVHHCPTEMTQLELWGCPWSRRPDGSVNVRRFGG----MKIERTWFAA---DKTGFHMLHTLFQ 142 (602)
T ss_dssp TC---SCHHHHHH---HHHHHHHHHHHHHHTTCCCCBCTTSSBCCBCCTT----CSSCCEECST---TCHHHHHHHHHHH
T ss_pred CC---CCHHHHHH---HHHHHHHHHHHHHHcCCCcccCCCCcccccccCC----ccCCeEEEcC---CCCHHHHHHHHHH
Confidence 00 00000000 000112344555666766432211000 000111 0001111111 1124678888999
Q ss_pred HHHHCC-CEEEcCceEEEEEEecccCCCe--EEEE-cCCCc--EEEcCEEEEcCCCChHH
Q 015088 162 LAIKNG-AVLRDNMEVKTVLKVKDAVKGG--VTVV-TSNGE--KFWGKKCVVTAGAWVGK 215 (413)
Q Consensus 162 ~~~~~G-v~i~~~~~V~~i~~~~~~~~~~--~~v~-~~~g~--~i~ad~VV~A~G~~s~~ 215 (413)
.+.+.| ++++++++|++|.. ++ +.. +.+. +.+|+ .+.|+.||+|+|+++..
T Consensus 143 ~~~~~gnv~i~~~~~v~~l~~--~~-g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s~~ 199 (602)
T 1kf6_A 143 TSLQFPQIQRFDEHFVLDILV--DD-GHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRV 199 (602)
T ss_dssp HHTTCTTEEEEETEEEEEEEE--ET-TEEEEEEEEETTTTEEEEEECSCEEECCCCCGGG
T ss_pred HHHhCCCcEEEeCCEEEEEEE--eC-CEEEEEEEEEcCCCcEEEEEcCeEEECCCCCccc
Confidence 888888 99999999999987 63 232 3233 36776 68999999999998854
No 67
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.36 E-value=1e-11 Score=110.62 Aligned_cols=157 Identities=19% Similarity=0.159 Sum_probs=94.0
Q ss_pred CcccEEEECCCHHHHHHHHHHHHc-CCcEEEEcccCCCCCCCcccCCCceeecccCCCChHHHHHHHHHHHHHHHHHhCC
Q 015088 6 EKFDVIVVGAGIMGSSAAYQLAKR-GQKTLLLEQFDFLHHRGSSHGESRTIRATYPEDYYHPMVLESCLLWEQAQSEIGY 84 (413)
Q Consensus 6 ~~~dvvIIGaG~aG~~~A~~L~~~-g~~V~liE~~~~~gg~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 84 (413)
.++||+|||||++|+++|+.|+++ |.+|+|||+....++... ..++.+..
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~--~~~~~~~~--------------------------- 88 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAW--LGGQLFSA--------------------------- 88 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTT--CCSTTCCC---------------------------
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCcee--cCCcchHH---------------------------
Confidence 357999999999999999999997 999999999877643211 11111100
Q ss_pred eeEEeeceeeeCCCChhhHHHHHHHHhhCCCCccccCHHHHHHHcCCcccCCCCeEEEEecCCceeChHHHHHHHHHHHH
Q 015088 85 KVYFKAHQFDMGPSENKSLRSVIASCRKNSVPHQVLDCRQVLEKYSGRIEIPENWVGVATELGGVIKPTKAVSMFQTLAI 164 (413)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 164 (413)
.. .... ..+++...|+++.. ...+ +. ..+...+...+.+.+.
T Consensus 89 -~~-------~~~~-------~~~~l~~~G~~~~~----------------~~~~---~~----~~~~~~~~~~l~~~~~ 130 (284)
T 1rp0_A 89 -MI-------VRKP-------AHLFLDEIGVAYDE----------------QDTY---VV----VKHAALFTSTIMSKLL 130 (284)
T ss_dssp -EE-------EETT-------THHHHHHHTCCCEE----------------CSSE---EE----ESCHHHHHHHHHHHHH
T ss_pred -HH-------cCcH-------HHHHHHHcCCCccc----------------CCCE---EE----ecCHHHHHHHHHHHHH
Confidence 00 0000 01122223333211 0000 00 1134567777777776
Q ss_pred H-CCCEEEcCceEEEEEEecccCCCeEEEEcC---------CC-----cEEEcCEEEEcCCCCh------HHhhhhhcCC
Q 015088 165 K-NGAVLRDNMEVKTVLKVKDAVKGGVTVVTS---------NG-----EKFWGKKCVVTAGAWV------GKLVKRITGL 223 (413)
Q Consensus 165 ~-~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~---------~g-----~~i~ad~VV~A~G~~s------~~l~~~~~g~ 223 (413)
+ .|++++++++|+++.. ++ +....+.+. +| .+++||.||+|+|..+ ..++..+ +.
T Consensus 131 ~~~gv~i~~~~~V~~i~~--~~-~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~~~~~~~~~~~~~-g~ 206 (284)
T 1rp0_A 131 ARPNVKLFNAVAAEDLIV--KG-NRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSI-GM 206 (284)
T ss_dssp TSTTEEEEETEEEEEEEE--ET-TEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSSTTTTHHHHHHHHT-TS
T ss_pred hcCCCEEEcCcEEEEEEe--cC-CeEEEEEEeccccccccCccccCceEEEECCEEEECCCCchHHHHHHHHHhhhc-cC
Confidence 6 6999999999999987 52 222233321 22 4699999999999543 3444333 55
Q ss_pred ccceeEEEEE
Q 015088 224 ELPIQAVETT 233 (413)
Q Consensus 224 ~~~~~~~~g~ 233 (413)
..++.+.++.
T Consensus 207 ~~~v~~~~g~ 216 (284)
T 1rp0_A 207 IDHVPGMKAL 216 (284)
T ss_dssp SSCCCCCEEE
T ss_pred CCCcCCcCCc
Confidence 5677777774
No 68
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.35 E-value=2.4e-11 Score=116.13 Aligned_cols=174 Identities=15% Similarity=0.109 Sum_probs=94.2
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCcccCCCceeecccC-CCChHHHHHHHHHHHHHHHHHhCCeeE
Q 015088 9 DVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESRTIRATYP-EDYYHPMVLESCLLWEQAQSEIGYKVY 87 (413)
Q Consensus 9 dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~gg~~~s~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~ 87 (413)
||+|||||++|+++|+.|+++|++|+||||. ..+ +++....+.+..... .......... .+....+..
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~-~~~--g~s~~a~Ggi~~~~~~~d~~~~~~~d------~l~~g~~~~-- 69 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR-IDG--GSTPIAKGGVAASVGSDDSPELHAQD------TIRVGDGLC-- 69 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS-TTC--SSGGGCCSCEECCCSTTCCHHHHHHH------HHHHHTTCS--
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCC--chHHHHhCCeEEeCCCCCCHHHHHHH------HHHhcCCcC--
Confidence 7999999999999999999999999999998 432 222222222222221 1111111111 111110000
Q ss_pred EeeceeeeCCCChhhHHHHHHHHhhCCCCccccCHHHHHHHcCCcccCCCCeEEEEecCCceeChHHHHHHHHHHHHHCC
Q 015088 88 FKAHQFDMGPSENKSLRSVIASCRKNSVPHQVLDCRQVLEKYSGRIEIPENWVGVATELGGVIKPTKAVSMFQTLAIKNG 167 (413)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G 167 (413)
....+.. -........+++..+|+++... ....+. .. .....+. +...+..+.+.|.+.+++.|
T Consensus 70 -d~~~v~~---~~~~~~~~i~~l~~~Gv~~~~~-----~~~~~g-~~---~~r~~~~---~d~~g~~l~~~L~~~~~~~g 133 (472)
T 2e5v_A 70 -DVKTVNY---VTSEAKNVIETFESWGFEFEED-----LRLEGG-HT---KRRVLHR---TDETGREIFNFLLKLAREEG 133 (472)
T ss_dssp -CHHHHHH---HHHHHHHHHHHHHHTTCCCCSS-----CBCCTT-CS---SCCEECS---SSCHHHHHHHHHHHHHHHTT
T ss_pred -CHHHHHH---HHHHHHHHHHHHHHcCCCCCcc-----cccccC-cC---cCcEEEe---CCCCHHHHHHHHHHHHHhCC
Confidence 0000000 0001123445556667654321 001111 00 0111111 22345678888988888889
Q ss_pred CEEEcCceEEEEEEecccCCCeE--EEEcCCCcEEEcCEEEEcCCCChH
Q 015088 168 AVLRDNMEVKTVLKVKDAVKGGV--TVVTSNGEKFWGKKCVVTAGAWVG 214 (413)
Q Consensus 168 v~i~~~~~V~~i~~~~~~~~~~~--~v~~~~g~~i~ad~VV~A~G~~s~ 214 (413)
++++++++| ++.. ++ +... .+.+.+|+ +.+|.||+|+|+++.
T Consensus 134 v~i~~~~~v-~l~~--~~-~~v~Gv~v~~~~g~-~~a~~VVlAtGg~~~ 177 (472)
T 2e5v_A 134 IPIIEDRLV-EIRV--KD-GKVTGFVTEKRGLV-EDVDKLVLATGGYSY 177 (472)
T ss_dssp CCEECCCEE-EEEE--ET-TEEEEEEETTTEEE-CCCSEEEECCCCCGG
T ss_pred CEEEECcEE-EEEE--eC-CEEEEEEEEeCCCe-EEeeeEEECCCCCcc
Confidence 999999999 9987 52 2332 33334454 889999999999874
No 69
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=99.35 E-value=2e-11 Score=115.13 Aligned_cols=65 Identities=18% Similarity=0.156 Sum_probs=52.8
Q ss_pred EecCCceeChHHHHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCC
Q 015088 143 ATELGGVIKPTKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAW 212 (413)
Q Consensus 143 ~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~ 212 (413)
..+.+|. ..+.+.|.+.+++.|++++++++|++|.. ++++..+.|++.+|++++||.||.|++.+
T Consensus 249 ~yp~gG~---~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~--d~~g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 249 IYPLYGL---GGIPEGFSRMCAINGGTFMLNKNVVDFVF--DDDNKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp EEETTCT---THHHHHHHHHHHHC--CEESSCCEEEEEE--CTTSCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred EEECCCH---HHHHHHHHHHHHHcCCEEEeCCeEEEEEE--ecCCeEEEEEECCCcEEECCEEEECCCcc
Confidence 3444443 68899999999999999999999999987 54456788999999889999999999987
No 70
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.34 E-value=1e-11 Score=117.68 Aligned_cols=42 Identities=45% Similarity=0.594 Sum_probs=38.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCccc
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSH 49 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~gg~~~s~ 49 (413)
+||+|||||++|+++|++|+++|++|+|||+++..||+..+.
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~t~ 43 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGGRAYSR 43 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEE
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccCeecce
Confidence 799999999999999999999999999999988887766543
No 71
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.34 E-value=5.8e-12 Score=122.10 Aligned_cols=145 Identities=19% Similarity=0.195 Sum_probs=95.8
Q ss_pred CcccEEEECCCHHHHHHHHHHH-HcCCcEEEEcccCCCCCCCcccCCCceeecccCCCChHHHHHHHHHHHHHHHHHhCC
Q 015088 6 EKFDVIVVGAGIMGSSAAYQLA-KRGQKTLLLEQFDFLHHRGSSHGESRTIRATYPEDYYHPMVLESCLLWEQAQSEIGY 84 (413)
Q Consensus 6 ~~~dvvIIGaG~aG~~~A~~L~-~~g~~V~liE~~~~~gg~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 84 (413)
.++||+|||||++|+++|+.|+ +.|++|+|||+++..||...... + .+.
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~--------y----------------------pg~ 56 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNR--------Y----------------------PGA 56 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCC--------C----------------------TTC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccC--------C----------------------CCc
Confidence 4689999999999999999999 89999999999876653211000 0 011
Q ss_pred eeEEeeceeeeCCCChhhHHHHHHHHhhCCCCccccCHHHHHHHcCCcccCCCCeEEEEecCCceeChHHHHHHHHHHHH
Q 015088 85 KVYFKAHQFDMGPSENKSLRSVIASCRKNSVPHQVLDCRQVLEKYSGRIEIPENWVGVATELGGVIKPTKAVSMFQTLAI 164 (413)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 164 (413)
.+......+... +. .+.....+. . ....+...+...+.+.++
T Consensus 57 ~~d~~s~~~~~~-----------------------~~-~~~~~~~~~----~----------~~~~~~~ei~~~l~~~~~ 98 (540)
T 3gwf_A 57 LSDTESHLYRFS-----------------------FD-RDLLQESTW----K----------TTYITQPEILEYLEDVVD 98 (540)
T ss_dssp EEEEEGGGSSCC-----------------------SC-HHHHHHCCC----S----------BSEEEHHHHHHHHHHHHH
T ss_pred eecCCcceeeec-----------------------cc-cccccCCCC----c----------ccCCCHHHHHHHHHHHHH
Confidence 111111110000 00 001111111 1 123345677888888888
Q ss_pred HCCC--EEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCChHHhhhhh
Q 015088 165 KNGA--VLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWVGKLVKRI 220 (413)
Q Consensus 165 ~~Gv--~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s~~l~~~~ 220 (413)
+.|+ +++++++|+++.. +++...|.|++.+|+++++|+||+|+|.++....+.+
T Consensus 99 ~~g~~~~i~~~~~V~~i~~--~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s~p~~p~i 154 (540)
T 3gwf_A 99 RFDLRRHFKFGTEVTSALY--LDDENLWEVTTDHGEVYRAKYVVNAVGLLSAINFPNL 154 (540)
T ss_dssp HTTCGGGEEESCCEEEEEE--ETTTTEEEEEETTSCEEEEEEEEECCCSCCSBCCCCC
T ss_pred HcCCcceeEeccEEEEEEE--eCCCCEEEEEEcCCCEEEeCEEEECCcccccCCCCCC
Confidence 8888 8999999999988 6444689999999988999999999998775544433
No 72
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.34 E-value=2e-12 Score=125.57 Aligned_cols=145 Identities=17% Similarity=0.162 Sum_probs=94.2
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCcccCCCceeecccCCCChHHHHHHHHHHHHHHHHHhCCe
Q 015088 6 EKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESRTIRATYPEDYYHPMVLESCLLWEQAQSEIGYK 85 (413)
Q Consensus 6 ~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~gg~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 85 (413)
.++||+|||||++|+++|+.|++.|++|+|||++...||.-......+ ..
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg------------------------------~~ 69 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPG------------------------------AR 69 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTT------------------------------CB
T ss_pred CCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCC------------------------------ce
Confidence 468999999999999999999999999999999876653211000000 00
Q ss_pred eEEeeceeeeCCCChhhHHHHHHHHhhCCCCccccCHHHHHHHcCCcccCCCCeEEEEecCCceeChHHHHHHHHHHHHH
Q 015088 86 VYFKAHQFDMGPSENKSLRSVIASCRKNSVPHQVLDCRQVLEKYSGRIEIPENWVGVATELGGVIKPTKAVSMFQTLAIK 165 (413)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 165 (413)
+..+...+ ... +. .+....... .........+...+.+.+++
T Consensus 70 ~dv~s~~y--------------------~~~---f~-~~~~~~~~~--------------~~~~~~~~ei~~yl~~~~~~ 111 (549)
T 4ap3_A 70 CDVESIDY--------------------SYS---FS-PELEQEWNW--------------SEKYATQPEILAYLEHVADR 111 (549)
T ss_dssp CSSCTTTS--------------------SCC---SC-HHHHHHCCC--------------SSSSCBHHHHHHHHHHHHHH
T ss_pred eCCCchhc--------------------ccc---cc-cccccCCCC--------------ccCCCCHHHHHHHHHHHHHH
Confidence 00000000 000 00 000000010 01223446777888888888
Q ss_pred CCC--EEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCChHHhhhhh
Q 015088 166 NGA--VLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWVGKLVKRI 220 (413)
Q Consensus 166 ~Gv--~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s~~l~~~~ 220 (413)
.|+ +++++++|+++.. +++...|.|++.+|+++++|+||+|+|.++....+.+
T Consensus 112 ~g~~~~i~~~~~V~~i~~--~~~~~~w~V~~~~G~~i~ad~lV~AtG~~s~p~~p~i 166 (549)
T 4ap3_A 112 FDLRRDIRFDTRVTSAVL--DEEGLRWTVRTDRGDEVSARFLVVAAGPLSNANTPAF 166 (549)
T ss_dssp TTCGGGEECSCCEEEEEE--ETTTTEEEEEETTCCEEEEEEEEECCCSEEECCCCCC
T ss_pred cCCCccEEECCEEEEEEE--cCCCCEEEEEECCCCEEEeCEEEECcCCCCCCCCCCC
Confidence 887 8999999999987 6444689999999988999999999997765444433
No 73
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=99.33 E-value=1.3e-11 Score=121.79 Aligned_cols=188 Identities=12% Similarity=0.115 Sum_probs=100.3
Q ss_pred CcccEEEECCCHHHHHHHHHHHHc------CCcEEEEcccCCCCCCCcccCCCc-eeecccCCCChHHHHHHHHHHHHHH
Q 015088 6 EKFDVIVVGAGIMGSSAAYQLAKR------GQKTLLLEQFDFLHHRGSSHGESR-TIRATYPEDYYHPMVLESCLLWEQA 78 (413)
Q Consensus 6 ~~~dvvIIGaG~aG~~~A~~L~~~------g~~V~liE~~~~~gg~~~s~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~ 78 (413)
.++||||||||++|++||+.|+++ |.+|+||||....++ ++...++ .+......... ...+...
T Consensus 21 ~~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~~~s--~s~AqG~~gi~a~l~~ds~-------e~~~~~~ 91 (662)
T 3gyx_A 21 HSVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASLERS--GAVAQGLSAINTYLGDNNA-------DDYVRMV 91 (662)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCTTTC--STTTTCEEEECCCCTTSCH-------HHHHHHH
T ss_pred EEcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCCCCC--cccccCcchheeecCCCCH-------HHHHHHH
Confidence 468999999999999999999998 999999999876532 2222220 22222211111 1111111
Q ss_pred HHH-hCCeeEEeeceeeeCCCChhhHHHHHHHHhhCCCCcccc-CH-----HHHHHHcCCcccCCCCeEEEEecC---Cc
Q 015088 79 QSE-IGYKVYFKAHQFDMGPSENKSLRSVIASCRKNSVPHQVL-DC-----RQVLEKYSGRIEIPENWVGVATEL---GG 148 (413)
Q Consensus 79 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~---~~ 148 (413)
... .+.. ....+.. -.......+.++..+|+++... .. ......++. +.... +..... ..
T Consensus 92 ~~~~~gl~---d~~~v~~---l~~~a~~~i~~L~~~Gv~f~~~~~~G~~~~g~~~~~fg~-~~~~g---g~~~~r~~~~~ 161 (662)
T 3gyx_A 92 RTDLMGLV---REDLIYD---LGRHVDDSVHLFEEWGLPVWIKDEHGHNLDGAQAKAAGK-SLRNG---DKPVRSGRWQI 161 (662)
T ss_dssp HHHTTTCC---CHHHHHH---HHHHHHHHHHHHHHHTCCBCEECSSSCEECHHHHHHHTC-CTTTT---CCBCCSSTTCE
T ss_pred HHhcCCCc---cHHHHHH---HHHHHHHHHHHHHHcCCCceecCCCCccccchhhhcccc-ccccC---ccccccceecc
Confidence 111 0100 0000000 0001123344555667665332 10 111122222 11000 000000 12
Q ss_pred eeChHHHHHHHHHHHHHC--CCEEEcCceEEEEEEecccC--CCeEEEE---cCCCc--EEEcCEEEEcCCCChH
Q 015088 149 VIKPTKAVSMFQTLAIKN--GAVLRDNMEVKTVLKVKDAV--KGGVTVV---TSNGE--KFWGKKCVVTAGAWVG 214 (413)
Q Consensus 149 ~~~~~~~~~~l~~~~~~~--Gv~i~~~~~V~~i~~~~~~~--~~~~~v~---~~~g~--~i~ad~VV~A~G~~s~ 214 (413)
.+.+..+.+.|.+.+++. |++|+.++.|++|.. +++ +....|. ..+|+ .+.|+.||+|||+++.
T Consensus 162 ~~~G~~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~--~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG~g~ 234 (662)
T 3gyx_A 162 MINGESYKVIVAEAAKNALGQDRIIERIFIVKLLL--DKNTPNRIAGAVGFNLRANEVHIFKANAMVVACGGAVN 234 (662)
T ss_dssp EEEETSHHHHHHHHHHHHHCTTTEECSEEECCCEE--CSSSTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCS
T ss_pred cCCHHHHHHHHHHHHHhcCCCcEEEEceEEEEEEE--eCCccceEEEEEEEEcCCCcEEEEEeCEEEECCCcccc
Confidence 234567888888888887 999999999999987 643 1333332 24554 6899999999999774
No 74
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.32 E-value=6.5e-12 Score=121.91 Aligned_cols=148 Identities=16% Similarity=0.135 Sum_probs=93.1
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCcccCCCceeecccCCCChHHHHHHHHHHHHHHHHHhCC
Q 015088 5 GEKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESRTIRATYPEDYYHPMVLESCLLWEQAQSEIGY 84 (413)
Q Consensus 5 ~~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~gg~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 84 (413)
..++||+|||||++|+++|+.|++.|++|+|||+++..||.-.. ..++. .
T Consensus 7 ~~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~--------~~yPg----------------------~ 56 (545)
T 3uox_A 7 SPALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYW--------NRYPG----------------------C 56 (545)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHH--------CCCTT----------------------C
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccc--------CCCCc----------------------e
Confidence 34689999999999999999999999999999998776532100 00110 0
Q ss_pred eeEEeeceeeeCCCChhhHHHHHHHHhhCCCCccccCHHHHHHHcCCcccCCCCeEEEEecCCceeChHHHHHHHHHHHH
Q 015088 85 KVYFKAHQFDMGPSENKSLRSVIASCRKNSVPHQVLDCRQVLEKYSGRIEIPENWVGVATELGGVIKPTKAVSMFQTLAI 164 (413)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 164 (413)
.+ +... ..+...-.... ... . ...........+...+...++
T Consensus 57 ~~------------d~~~--~~y~~~f~~~~-------------~~~-~----------~~~~~~~~~~ei~~yl~~~~~ 98 (545)
T 3uox_A 57 RL------------DTES--YAYGYFALKGI-------------IPE-W----------EWSENFASQPEMLRYVNRAAD 98 (545)
T ss_dssp BC------------SSCH--HHHCHHHHTTS-------------STT-C----------CCSBSSCBHHHHHHHHHHHHH
T ss_pred ee------------cCch--hhcccccCccc-------------ccC-C----------CccccCCCHHHHHHHHHHHHH
Confidence 00 0000 00000000000 000 0 001122344667777888888
Q ss_pred HCCC--EEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCChHHhhhhhcC
Q 015088 165 KNGA--VLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWVGKLVKRITG 222 (413)
Q Consensus 165 ~~Gv--~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s~~l~~~~~g 222 (413)
+.|+ .++++++|+++.. +++...|.|++.+|+++++|+||+|+|.++....+.+.|
T Consensus 99 ~~~l~~~i~~~~~V~~~~~--~~~~~~w~V~~~~G~~~~ad~lV~AtG~~s~p~~p~ipG 156 (545)
T 3uox_A 99 AMDVRKHYRFNTRVTAARY--VENDRLWEVTLDNEEVVTCRFLISATGPLSASRMPDIKG 156 (545)
T ss_dssp HHTCGGGEECSCCEEEEEE--EGGGTEEEEEETTTEEEEEEEEEECCCSCBC---CCCTT
T ss_pred HcCCcCcEEECCEEEEEEE--eCCCCEEEEEECCCCEEEeCEEEECcCCCCCCcCCCCCC
Confidence 8787 8999999999987 644578999999998899999999999877555444433
No 75
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=99.31 E-value=1.9e-11 Score=117.40 Aligned_cols=59 Identities=14% Similarity=0.219 Sum_probs=50.2
Q ss_pred hHHHHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCChH
Q 015088 152 PTKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWVG 214 (413)
Q Consensus 152 ~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s~ 214 (413)
...+.+.+.+.+++.|++++++++|+++.. + ++.+.+.+.+|+++.+|.||+|+|...+
T Consensus 231 ~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~--~--~~~v~v~~~~g~~i~aD~Vi~A~G~~p~ 289 (484)
T 3o0h_A 231 DYDLRQLLNDAMVAKGISIIYEATVSQVQS--T--ENCYNVVLTNGQTICADRVMLATGRVPN 289 (484)
T ss_dssp CHHHHHHHHHHHHHHTCEEESSCCEEEEEE--C--SSSEEEEETTSCEEEESEEEECCCEEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCEEEEEEe--e--CCEEEEEECCCcEEEcCEEEEeeCCCcC
Confidence 356778888889999999999999999988 6 4567888888888999999999997554
No 76
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.30 E-value=2.5e-11 Score=110.96 Aligned_cols=119 Identities=21% Similarity=0.289 Sum_probs=85.4
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCcccCCCceeecccCCCChHHHHHHHHHHHHHHHHHhCC
Q 015088 5 GEKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESRTIRATYPEDYYHPMVLESCLLWEQAQSEIGY 84 (413)
Q Consensus 5 ~~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~gg~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 84 (413)
..++||+|||||++|+++|+.|+++|++|+|||++...++.... .++.
T Consensus 3 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~---------~~~~----------------------- 50 (335)
T 2zbw_A 3 ADHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLTA---------LYPE----------------------- 50 (335)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHHH---------TCTT-----------------------
T ss_pred CCcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeec---------cCCC-----------------------
Confidence 34689999999999999999999999999999998655311000 0000
Q ss_pred eeEEeeceeeeCCCChhhHHHHHHHHhhCCCCccccCHHHHHHHcCCcccCCCCeEEEEecCCceeChHHHHHHHHHHHH
Q 015088 85 KVYFKAHQFDMGPSENKSLRSVIASCRKNSVPHQVLDCRQVLEKYSGRIEIPENWVGVATELGGVIKPTKAVSMFQTLAI 164 (413)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 164 (413)
.... . .+. + ..+.+..+...+.+.+.
T Consensus 51 ~~~~-------------------------~--------------~~~-~--------------~~~~~~~~~~~l~~~~~ 76 (335)
T 2zbw_A 51 KYIY-------------------------D--------------VAG-F--------------PKVYAKDLVKGLVEQVA 76 (335)
T ss_dssp SEEC-------------------------C--------------STT-C--------------SSEEHHHHHHHHHHHHG
T ss_pred ceee-------------------------c--------------cCC-C--------------CCCCHHHHHHHHHHHHH
Confidence 0000 0 000 0 01234567777778888
Q ss_pred HCCCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCCh
Q 015088 165 KNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWV 213 (413)
Q Consensus 165 ~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s 213 (413)
+.+++++++++|+++.. + ++.+.|.+.+|+++++|+||+|+|..+
T Consensus 77 ~~~~~~~~~~~v~~i~~--~--~~~~~v~~~~g~~~~~~~lv~AtG~~~ 121 (335)
T 2zbw_A 77 PFNPVYSLGERAETLER--E--GDLFKVTTSQGNAYTAKAVIIAAGVGA 121 (335)
T ss_dssp GGCCEEEESCCEEEEEE--E--TTEEEEEETTSCEEEEEEEEECCTTSE
T ss_pred HcCCEEEeCCEEEEEEE--C--CCEEEEEECCCCEEEeCEEEECCCCCC
Confidence 88999999999999988 6 347888888887799999999999853
No 77
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=99.30 E-value=4.5e-11 Score=115.86 Aligned_cols=69 Identities=20% Similarity=0.203 Sum_probs=54.4
Q ss_pred hHHHHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCe--EEEEcCCCc-EEEcCEEEEcCCCChHH--hhhhhcCC
Q 015088 152 PTKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGG--VTVVTSNGE-KFWGKKCVVTAGAWVGK--LVKRITGL 223 (413)
Q Consensus 152 ~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~--~~v~~~~g~-~i~ad~VV~A~G~~s~~--l~~~~~g~ 223 (413)
+..+.+.+.+.+++.|++++++++|+++.. ++++.. +.|++.+|+ ++.+|.||+|+|.+.+. ++..+ |+
T Consensus 254 ~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~--~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~~~~~l~~~-gl 327 (523)
T 1mo9_A 254 DNETRAYVLDRMKEQGMEIISGSNVTRIEE--DANGRVQAVVAMTPNGEMRIETDFVFLGLGEQPRSAELAKIL-GL 327 (523)
T ss_dssp SHHHHHHHHHHHHHTTCEEESSCEEEEEEE--CTTSBEEEEEEEETTEEEEEECSCEEECCCCEECCHHHHHHH-TC
T ss_pred cHHHHHHHHHHHHhCCcEEEECCEEEEEEE--cCCCceEEEEEEECCCcEEEEcCEEEECcCCccCCccCHHHc-CC
Confidence 457788899999999999999999999987 532211 678888886 79999999999987753 55554 54
No 78
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.30 E-value=2.7e-11 Score=117.96 Aligned_cols=66 Identities=14% Similarity=0.135 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHHCC--CEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCChHHhhhhh
Q 015088 153 TKAVSMFQTLAIKNG--AVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWVGKLVKRI 220 (413)
Q Consensus 153 ~~~~~~l~~~~~~~G--v~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s~~l~~~~ 220 (413)
..+.+.+...+++.+ .+++++++|+++.. +++.+.|.|++.+|++++||+||+|+|.++....+.+
T Consensus 94 ~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~--~~~~~~w~V~~~~G~~~~ad~vV~AtG~~s~p~~p~i 161 (542)
T 1w4x_A 94 PEILRYINFVADKFDLRSGITFHTTVTAAAF--DEATNTWTVDTNHGDRIRARYLIMASGQLSVPQLPNF 161 (542)
T ss_dssp HHHHHHHHHHHHHTTGGGGEECSCCEEEEEE--ETTTTEEEEEETTCCEEEEEEEEECCCSCCCCCCCCC
T ss_pred HHHHHHHHHHHHHcCCCceEEcCcEEEEEEE--cCCCCeEEEEECCCCEEEeCEEEECcCCCCCCCCCCC
Confidence 456666666666665 67999999999987 6434679999989988999999999999876554433
No 79
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.29 E-value=3.6e-11 Score=112.68 Aligned_cols=59 Identities=8% Similarity=-0.009 Sum_probs=47.4
Q ss_pred eChHHHHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCChH
Q 015088 150 IKPTKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWVG 214 (413)
Q Consensus 150 ~~~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s~ 214 (413)
++...+.+.|.+.+. +++++++++|++++. + ++.+.|++.+|+++++|.||.|+|.+|.
T Consensus 125 i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~--~--~~~v~v~~~~g~~~~ad~vV~AdG~~S~ 183 (398)
T 2xdo_A 125 INRNDLRAILLNSLE--NDTVIWDRKLVMLEP--G--KKKWTLTFENKPSETADLVILANGGMSK 183 (398)
T ss_dssp ECHHHHHHHHHHTSC--TTSEEESCCEEEEEE--C--SSSEEEEETTSCCEEESEEEECSCTTCS
T ss_pred ECHHHHHHHHHhhcC--CCEEEECCEEEEEEE--C--CCEEEEEECCCcEEecCEEEECCCcchh
Confidence 455667777776553 378999999999988 6 4568888888878999999999999873
No 80
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.28 E-value=1e-11 Score=113.34 Aligned_cols=117 Identities=23% Similarity=0.348 Sum_probs=85.7
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCcccCCCceeecccCCCChHHHHHHHHHHHHHHHHHhCCe
Q 015088 6 EKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESRTIRATYPEDYYHPMVLESCLLWEQAQSEIGYK 85 (413)
Q Consensus 6 ~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~gg~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 85 (413)
..+||+|||||++|+++|+.|+++|++|+|||+.+..||.. ...++. ..
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~---------~~~~~~----------------------~~ 54 (332)
T 3lzw_A 6 KVYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQL---------SALYPE----------------------KY 54 (332)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHH---------HHHCTT----------------------SE
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCcee---------hhcCCC----------------------ce
Confidence 46899999999999999999999999999999987653210 000000 00
Q ss_pred eEEeeceeeeCCCChhhHHHHHHHHhhCCCCccccCHHHHHHHcCCcccCCCCeEEEEecCCceeChHHHHHHHHHHHHH
Q 015088 86 VYFKAHQFDMGPSENKSLRSVIASCRKNSVPHQVLDCRQVLEKYSGRIEIPENWVGVATELGGVIKPTKAVSMFQTLAIK 165 (413)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 165 (413)
. .. ++. + + .+.+..+...+.+.+++
T Consensus 55 -~-------------------------~~--------------~~~-~--~------------~~~~~~~~~~~~~~~~~ 79 (332)
T 3lzw_A 55 -I-------------------------YD--------------VAG-F--P------------KIRAQELINNLKEQMAK 79 (332)
T ss_dssp -E-------------------------CC--------------STT-C--S------------SEEHHHHHHHHHHHHTT
T ss_pred -E-------------------------ec--------------cCC-C--C------------CCCHHHHHHHHHHHHHH
Confidence 0 00 000 0 0 12346777888888888
Q ss_pred CCCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCC
Q 015088 166 NGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAW 212 (413)
Q Consensus 166 ~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~ 212 (413)
.|++++++++|+++.. .+ ++.+.|.+.+|+ +.+|+||+|+|..
T Consensus 80 ~~~~~~~~~~v~~i~~--~~-~~~~~v~~~~g~-~~~d~vVlAtG~~ 122 (332)
T 3lzw_A 80 FDQTICLEQAVESVEK--QA-DGVFKLVTNEET-HYSKTVIITAGNG 122 (332)
T ss_dssp SCCEEECSCCEEEEEE--CT-TSCEEEEESSEE-EEEEEEEECCTTS
T ss_pred hCCcEEccCEEEEEEE--CC-CCcEEEEECCCE-EEeCEEEECCCCC
Confidence 8999999999999988 62 247889998887 9999999999984
No 81
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.28 E-value=6.2e-11 Score=111.53 Aligned_cols=61 Identities=13% Similarity=0.219 Sum_probs=47.2
Q ss_pred eeChHHHHHHHHHHHHHC-C-CEEEcCceEEEEEEecccCCCeEEEEcCC---C--cEEEcCEEEEcCCCChH
Q 015088 149 VIKPTKAVSMFQTLAIKN-G-AVLRDNMEVKTVLKVKDAVKGGVTVVTSN---G--EKFWGKKCVVTAGAWVG 214 (413)
Q Consensus 149 ~~~~~~~~~~l~~~~~~~-G-v~i~~~~~V~~i~~~~~~~~~~~~v~~~~---g--~~i~ad~VV~A~G~~s~ 214 (413)
.++...+.+.|.+.+.+. | ++++++++|+++.. + +++.+.+.+ | ++++||.||.|+|.+|.
T Consensus 103 ~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~--~---~~v~v~~~~~~~g~~~~~~ad~vV~AdG~~S~ 170 (410)
T 3c96_A 103 SIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE--R---DGRVLIGARDGHGKPQALGADVLVGADGIHSA 170 (410)
T ss_dssp EEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE--E---TTEEEEEEEETTSCEEEEEESEEEECCCTTCH
T ss_pred eeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec--C---CccEEEEecCCCCCceEEecCEEEECCCccch
Confidence 456678888888888763 6 58999999999976 4 345565543 6 47999999999999884
No 82
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.28 E-value=6.1e-11 Score=98.05 Aligned_cols=65 Identities=22% Similarity=0.175 Sum_probs=52.9
Q ss_pred ChHHHHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCChHHhhhhhcCC
Q 015088 151 KPTKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWVGKLVKRITGL 223 (413)
Q Consensus 151 ~~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s~~l~~~~~g~ 223 (413)
.+..+.+.+.+.+++.|++++++ +|+++.. + ++.+.+++++| ++++|.||+|+|.++ .+.+.+ ++
T Consensus 54 ~~~~~~~~l~~~~~~~gv~v~~~-~v~~i~~--~--~~~~~v~~~~g-~i~ad~vI~A~G~~~-~~~~~~-g~ 118 (180)
T 2ywl_A 54 SGEELLRRLEAHARRYGAEVRPG-VVKGVRD--M--GGVFEVETEEG-VEKAERLLLCTHKDP-TLPSLL-GL 118 (180)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEEC-CCCEEEE--C--SSSEEEECSSC-EEEEEEEEECCTTCC-HHHHHH-TC
T ss_pred CHHHHHHHHHHHHHHcCCEEEeC-EEEEEEE--c--CCEEEEEECCC-EEEECEEEECCCCCC-CccccC-CC
Confidence 34577888888899999999999 9999988 6 45688888888 699999999999987 455554 54
No 83
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=99.28 E-value=5.8e-11 Score=114.64 Aligned_cols=57 Identities=21% Similarity=0.239 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHHCC-CEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCCh
Q 015088 153 TKAVSMFQTLAIKNG-AVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWV 213 (413)
Q Consensus 153 ~~~~~~l~~~~~~~G-v~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s 213 (413)
..+.+.|.+.+.+.| ++|+++++|++|.. + ++.+.|++.+|++++||+||+|+|...
T Consensus 255 ~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~--~--~~~v~v~~~~g~~~~ad~vI~a~~~~~ 312 (495)
T 2vvm_A 255 SAFARRFWEEAAGTGRLGYVFGCPVRSVVN--E--RDAARVTARDGREFVAKRVVCTIPLNV 312 (495)
T ss_dssp HHHHHHHHHHHHTTTCEEEESSCCEEEEEE--C--SSSEEEEETTCCEEEEEEEEECCCGGG
T ss_pred HHHHHHHHHHhhhcCceEEEeCCEEEEEEE--c--CCEEEEEECCCCEEEcCEEEECCCHHH
Confidence 577888888888888 99999999999988 6 456888888887799999999999754
No 84
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.28 E-value=9.7e-12 Score=120.30 Aligned_cols=61 Identities=18% Similarity=0.248 Sum_probs=50.2
Q ss_pred eeChHHHHHHHHHHHHH-CCCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCCh
Q 015088 149 VIKPTKAVSMFQTLAIK-NGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWV 213 (413)
Q Consensus 149 ~~~~~~~~~~l~~~~~~-~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s 213 (413)
.++...+...+.+.+++ .|++++ +++|++|.. ++ +..+.|.+.+|.++.|+.||+|+|.++
T Consensus 119 ~~Dr~~~~~~L~~~Le~~~GVeI~-~~~Vt~L~~--e~-g~V~GV~t~dG~~i~AdaVVLATG~~s 180 (637)
T 2zxi_A 119 QADKKRYREYMKKVCENQENLYIK-QEEVVDIIV--KN-NQVVGVRTNLGVEYKTKAVVVTTGTFL 180 (637)
T ss_dssp EECHHHHHHHHHHHHHTCTTEEEE-ESCEEEEEE--SS-SBEEEEEETTSCEEECSEEEECCTTCB
T ss_pred hCCHHHHHHHHHHHHHhCCCCEEE-EeEEEEEEe--cC-CEEEEEEECCCcEEEeCEEEEccCCCc
Confidence 45677888999999988 599995 789999987 62 345678888898899999999999874
No 85
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=99.28 E-value=3.7e-11 Score=116.65 Aligned_cols=45 Identities=38% Similarity=0.467 Sum_probs=40.7
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCcccC
Q 015088 6 EKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHG 50 (413)
Q Consensus 6 ~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~gg~~~s~~ 50 (413)
.++||+|||||++|++||++|+++|++|+|+|+++..||+..+..
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~t~~ 47 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLR 47 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEEC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCceeecc
Confidence 467999999999999999999999999999999999988766544
No 86
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.27 E-value=3.9e-11 Score=110.84 Aligned_cols=119 Identities=18% Similarity=0.198 Sum_probs=85.7
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCcccCCCceeecccCCCChHHHHHHHHHHHHHHHHHhCCe
Q 015088 6 EKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESRTIRATYPEDYYHPMVLESCLLWEQAQSEIGYK 85 (413)
Q Consensus 6 ~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~gg~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 85 (413)
.++||+|||||++|+++|+.|+++|++|+|||+....++... ......
T Consensus 13 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~--------------------------------~~~~~~ 60 (360)
T 3ab1_A 13 DMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLA--------------------------------ALYPEK 60 (360)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHH--------------------------------HTCTTS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccc--------------------------------ccCCCc
Confidence 368999999999999999999999999999999765531100 000000
Q ss_pred eEEeeceeeeCCCChhhHHHHHHHHhhCCCCccccCHHHHHHHcCCcccCCCCeEEEEecCCceeChHHHHHHHHHHHHH
Q 015088 86 VYFKAHQFDMGPSENKSLRSVIASCRKNSVPHQVLDCRQVLEKYSGRIEIPENWVGVATELGGVIKPTKAVSMFQTLAIK 165 (413)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 165 (413)
.. +. .+. + + .+++..+.+.+.+.+.+
T Consensus 61 ~~-------------------------~~--------------~~~-~--~------------~~~~~~~~~~l~~~~~~ 86 (360)
T 3ab1_A 61 HI-------------------------YD--------------VAG-F--P------------EVPAIDLVESLWAQAER 86 (360)
T ss_dssp EE-------------------------CC--------------STT-C--S------------SEEHHHHHHHHHHHHHT
T ss_pred cc-------------------------cc--------------CCC-C--C------------CCCHHHHHHHHHHHHHH
Confidence 00 00 000 0 0 12446677778888888
Q ss_pred CCCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCCh
Q 015088 166 NGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWV 213 (413)
Q Consensus 166 ~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s 213 (413)
.|++++++++|+++.. ++ ++.+.|.+.+|+++++|+||+|+|..+
T Consensus 87 ~~~~~~~~~~v~~i~~--~~-~~~~~v~~~~g~~~~~~~li~AtG~~~ 131 (360)
T 3ab1_A 87 YNPDVVLNETVTKYTK--LD-DGTFETRTNTGNVYRSRAVLIAAGLGA 131 (360)
T ss_dssp TCCEEECSCCEEEEEE--CT-TSCEEEEETTSCEEEEEEEEECCTTCS
T ss_pred hCCEEEcCCEEEEEEE--CC-CceEEEEECCCcEEEeeEEEEccCCCc
Confidence 8999999999999987 62 247888888887899999999999854
No 87
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.27 E-value=2.9e-11 Score=109.77 Aligned_cols=58 Identities=12% Similarity=0.094 Sum_probs=47.6
Q ss_pred ChHHHHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCCh
Q 015088 151 KPTKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWV 213 (413)
Q Consensus 151 ~~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s 213 (413)
.+..+...+.+.+++.|+++++ ++|+++.. + ++.+.+.+.+|.++.+|.||+|+|...
T Consensus 68 ~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~--~--~~~~~v~~~~g~~~~~d~lvlAtG~~~ 125 (323)
T 3f8d_A 68 QASDMIKVFNKHIEKYEVPVLL-DIVEKIEN--R--GDEFVVKTKRKGEFKADSVILGIGVKR 125 (323)
T ss_dssp EHHHHHHHHHHHHHTTTCCEEE-SCEEEEEE--C----CEEEEESSSCEEEEEEEEECCCCEE
T ss_pred CHHHHHHHHHHHHHHcCCEEEE-EEEEEEEe--c--CCEEEEEECCCCEEEcCEEEECcCCCC
Confidence 3456777788888888999998 89999988 6 467888888888899999999999863
No 88
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.27 E-value=4.5e-11 Score=116.14 Aligned_cols=61 Identities=20% Similarity=0.210 Sum_probs=50.5
Q ss_pred eeChHHHHHHHHHHHHH-CCCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCCh
Q 015088 149 VIKPTKAVSMFQTLAIK-NGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWV 213 (413)
Q Consensus 149 ~~~~~~~~~~l~~~~~~-~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s 213 (413)
.++...+...+.+.+++ .|++++ +++|+++.. ++ +..+.|.+.+|.+++||.||+|+|.++
T Consensus 120 ~~Dr~~~~~~L~e~Le~~~GV~I~-~~~V~~L~~--e~-g~V~GV~t~dG~~I~Ad~VVLATGt~s 181 (651)
T 3ces_A 120 QADRVLYRQAVRTALENQPNLMIF-QQAVEDLIV--EN-DRVVGAVTQMGLKFRAKAVVLTVGTFL 181 (651)
T ss_dssp EECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEE--SS-SBEEEEEETTSEEEEEEEEEECCSTTT
T ss_pred hCCHHHHHHHHHHHHHhCCCCEEE-EEEEEEEEe--cC-CEEEEEEECCCCEEECCEEEEcCCCCc
Confidence 56777888999999988 699995 789999987 52 345678888888899999999999975
No 89
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.26 E-value=1.9e-11 Score=113.30 Aligned_cols=60 Identities=17% Similarity=0.165 Sum_probs=49.8
Q ss_pred eChHHHHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCChH
Q 015088 150 IKPTKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWVG 214 (413)
Q Consensus 150 ~~~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s~ 214 (413)
+.+..+...+.+.+++.|++++++++|+++.. + ++.+.|.+.+++ +.+|+||+|+|.++.
T Consensus 85 ~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~--~--~~~~~v~~~~g~-~~~d~vVlAtG~~~~ 144 (369)
T 3d1c_A 85 ISGETYAEYLQVVANHYELNIFENTVVTNISA--D--DAYYTIATTTET-YHADYIFVATGDYNF 144 (369)
T ss_dssp CBHHHHHHHHHHHHHHTTCEEECSCCEEEEEE--C--SSSEEEEESSCC-EEEEEEEECCCSTTS
T ss_pred CCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEE--C--CCeEEEEeCCCE-EEeCEEEECCCCCCc
Confidence 34567777888888889999999999999988 6 356888887775 999999999999763
No 90
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=99.26 E-value=3.2e-11 Score=115.92 Aligned_cols=47 Identities=34% Similarity=0.445 Sum_probs=40.8
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCcccCCC
Q 015088 6 EKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGES 52 (413)
Q Consensus 6 ~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~gg~~~s~~~~ 52 (413)
..+||+|||||++|+++|+.|+++|++|+|+|+++..||+..+....
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~~t~~~~ 61 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVGTHALA 61 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTCCEEEET
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeeeeccC
Confidence 45899999999999999999999999999999999998887765433
No 91
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.25 E-value=7.5e-11 Score=101.69 Aligned_cols=61 Identities=20% Similarity=0.141 Sum_probs=48.9
Q ss_pred ChHHHHHHHHHHHHHC-CCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCChHH
Q 015088 151 KPTKAVSMFQTLAIKN-GAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWVGK 215 (413)
Q Consensus 151 ~~~~~~~~l~~~~~~~-Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s~~ 215 (413)
+...+.+.+.+.+++. |++++ +++|+++.. ++ +..+.|.+.+|++++||.||+|+|.++..
T Consensus 66 ~~~~~~~~l~~~~~~~~gv~i~-~~~v~~i~~--~~-~~v~~v~~~~g~~i~a~~VV~A~G~~s~~ 127 (232)
T 2cul_A 66 RVWAFHARAKYLLEGLRPLHLF-QATATGLLL--EG-NRVVGVRTWEGPPARGEKVVLAVGSFLGA 127 (232)
T ss_dssp CHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEE--ET-TEEEEEEETTSCCEECSEEEECCTTCSSC
T ss_pred CHHHHHHHHHHHHHcCCCcEEE-EeEEEEEEE--eC-CEEEEEEECCCCEEECCEEEECCCCChhh
Confidence 4467788888888887 99998 679999987 62 24456788888779999999999998753
No 92
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=99.25 E-value=5.2e-11 Score=112.03 Aligned_cols=56 Identities=13% Similarity=0.058 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCChH
Q 015088 153 TKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWVG 214 (413)
Q Consensus 153 ~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s~ 214 (413)
..+.+.|.+. .+.+|+++++|++++. .+ ++.+.|++.+|++++||.||-|.|.+|.
T Consensus 112 ~~L~~~L~~~---~~~~v~~~~~v~~~~~--~~-~~~v~v~~~dG~~~~adlvVgADG~~S~ 167 (412)
T 4hb9_A 112 TELKEILNKG---LANTIQWNKTFVRYEH--IE-NGGIKIFFADGSHENVDVLVGADGSNSK 167 (412)
T ss_dssp HHHHHHHHTT---CTTTEECSCCEEEEEE--CT-TSCEEEEETTSCEEEESEEEECCCTTCH
T ss_pred HHHHHHHHhh---ccceEEEEEEEEeeeE--cC-CCeEEEEECCCCEEEeeEEEECCCCCcc
Confidence 4444444432 3567999999999987 53 3578899999999999999999999884
No 93
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=99.25 E-value=1.1e-10 Score=115.55 Aligned_cols=178 Identities=15% Similarity=0.147 Sum_probs=97.0
Q ss_pred CcccEEEECCCHHHHHHHHHHH---H-cCCcEEEEcccCCCCCCCcccCCCceeecc--cC-------CCChHHHHHHHH
Q 015088 6 EKFDVIVVGAGIMGSSAAYQLA---K-RGQKTLLLEQFDFLHHRGSSHGESRTIRAT--YP-------EDYYHPMVLESC 72 (413)
Q Consensus 6 ~~~dvvIIGaG~aG~~~A~~L~---~-~g~~V~liE~~~~~gg~~~s~~~~~~~~~~--~~-------~~~~~~l~~~~~ 72 (413)
.++||+|||||++|+++|+.|+ + +|.+|+||||....++. +. ..+..... .. ......
T Consensus 21 ~~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~~~s~--~~-a~G~~~~~~~~~~~~~~g~~ds~~~------ 91 (643)
T 1jnr_A 21 VETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAVERSG--AV-AQGLSAINTYIDLTGRSERQNTLED------ 91 (643)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCTTTCS--TT-TTCEEEESCCCCSSSSBSCCCCHHH------
T ss_pred ccCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCCCCCc--ce-ecccccccchhhHHHhcCCCCCHHH------
Confidence 3589999999999999999999 6 89999999998764321 11 12221111 10 011111
Q ss_pred HHHHHHHHHhCCeeEEeeceeeeCCCChhhHHHHHHHHhhCCCCccccCHHHHHHHcCCcccCCCCeEEEEecCCceeCh
Q 015088 73 LLWEQAQSEIGYKVYFKAHQFDMGPSENKSLRSVIASCRKNSVPHQVLDCRQVLEKYSGRIEIPENWVGVATELGGVIKP 152 (413)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (413)
.+...... +... .....+.. -........+++..+|+++..... .. +...... ...+++
T Consensus 92 -~~~~~~~~-g~~l-~d~~~v~~---~~~~~~~~i~~l~~~Gv~f~~~~~-------g~-~~~~~~~-------~~~~~g 150 (643)
T 1jnr_A 92 -YVRYVTLD-MMGL-AREDLVAD---YARHVDGTVHLFEKWGLPIWKTPD-------GK-YVREGQW-------QIMIHG 150 (643)
T ss_dssp -HHHHHHHH-TTTC-CCHHHHHH---HHHHHHHHHHHHHHTTCCBCBCTT-------SC-BCBSSSS-------CEEEEE
T ss_pred -HHHHHHHH-hcCc-CcHHHHHH---HHHHHHHHHHHHHHcCCcceeCCC-------CC-ccCCCcc-------ccCCCc
Confidence 11111111 0000 00000000 001112345556666766432110 00 0000000 012344
Q ss_pred HHHHHHHHHHHHHC-CC-EEEcCceEEEEEEecccC--CCeEEEE---cCCCc--EEEcCEEEEcCCCChHH
Q 015088 153 TKAVSMFQTLAIKN-GA-VLRDNMEVKTVLKVKDAV--KGGVTVV---TSNGE--KFWGKKCVVTAGAWVGK 215 (413)
Q Consensus 153 ~~~~~~l~~~~~~~-Gv-~i~~~~~V~~i~~~~~~~--~~~~~v~---~~~g~--~i~ad~VV~A~G~~s~~ 215 (413)
..+.+.|.+.+++. |+ +|++++.|++|.. +++ +....|. ..+|+ .+.|+.||+|+|+++..
T Consensus 151 ~~~~~~l~~~~~~~~gv~~i~~~~~v~~L~~--~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~~~ 220 (643)
T 1jnr_A 151 ESYKPIIAEAAKMAVGEENIYERVFIFELLK--DNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGATLL 220 (643)
T ss_dssp TTHHHHHHHHHHHHHCGGGEECSEEEEEEEE--CTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCSS
T ss_pred HHHHHHHHHHHHhcCCCcEEEecCEEEEEEE--cCCccceeEEEEEEEecCCcEEEEEcCEEEECCCccccc
Confidence 56778888888887 99 9999999999987 633 1333333 35565 68999999999998853
No 94
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.24 E-value=1e-10 Score=113.53 Aligned_cols=62 Identities=13% Similarity=0.142 Sum_probs=49.4
Q ss_pred eeChHHHHHHHHHHHHHC-CCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCChH
Q 015088 149 VIKPTKAVSMFQTLAIKN-GAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWVG 214 (413)
Q Consensus 149 ~~~~~~~~~~l~~~~~~~-Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s~ 214 (413)
.++...+...+.+.+++. |++++ +.+|+++.. ++ +....|.+.+|++++||.||+|+|.|+.
T Consensus 113 ~~Dr~~l~~~L~~~l~~~~GV~I~-~~~V~~L~~--d~-g~V~GV~t~~G~~i~Ad~VVLATG~~s~ 175 (641)
T 3cp8_A 113 QADKTQYSLYMRRIVEHEPNIDLL-QDTVIGVSA--NS-GKFSSVTVRSGRAIQAKAAILACGTFLN 175 (641)
T ss_dssp EECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEE--ET-TEEEEEEETTSCEEEEEEEEECCTTCBT
T ss_pred hcCHHHHHHHHHHHHHhCCCCEEE-eeEEEEEEe--cC-CEEEEEEECCCcEEEeCEEEECcCCCCC
Confidence 567778889999988884 99996 568999987 52 2344488888888999999999998854
No 95
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.23 E-value=1e-10 Score=112.41 Aligned_cols=135 Identities=16% Similarity=0.105 Sum_probs=87.3
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCcccCCCceeecccCCCChHHHHHHHHHHHHHHHHHhCCe
Q 015088 6 EKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESRTIRATYPEDYYHPMVLESCLLWEQAQSEIGYK 85 (413)
Q Consensus 6 ~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~gg~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 85 (413)
..+||+|||||++|+++|+.|+++|++|+|||+.+..+... ... .. ......+. ..+..
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~~-------~~~-~~---------~~~~~~l~----~~g~~ 149 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRHN-------VLH-LW---------PFTIHDLR----ALGAK 149 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCCC-------EEE-CC---------HHHHHHHH----TTTHH
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCCC-------ccc-CC---------hhHHHHHH----HcCCc
Confidence 46899999999999999999999999999999987653210 000 00 00111110 11100
Q ss_pred eEEeeceeeeCCCChhhHHHHHHHHhhCCCCccccCHHHHHHHcCCcccCCCCeEEEEecCCceeChHHHHHHHHHHHHH
Q 015088 86 VYFKAHQFDMGPSENKSLRSVIASCRKNSVPHQVLDCRQVLEKYSGRIEIPENWVGVATELGGVIKPTKAVSMFQTLAIK 165 (413)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 165 (413)
.. . +. +.... -..++...+...|.+.+++
T Consensus 150 ----------------------~~---~----------------~~-~~~~~---------~~~~~~~~l~~~L~~~~~~ 178 (497)
T 2bry_A 150 ----------------------KF---Y----------------GR-FCTGT---------LDHISIRQLQLLLLKVALL 178 (497)
T ss_dssp ----------------------HH---C----------------TT-TTCTT---------CCEEEHHHHHHHHHHHHHH
T ss_pred ----------------------cc---c----------------cc-ccccc---------cccCCHHHHHHHHHHHHHh
Confidence 00 0 00 00000 0123446788888898988
Q ss_pred CCCEEEcCceEEEEEEeccc-CCCeEEEEc--C-CC--cEEEcCEEEEcCCCChH
Q 015088 166 NGAVLRDNMEVKTVLKVKDA-VKGGVTVVT--S-NG--EKFWGKKCVVTAGAWVG 214 (413)
Q Consensus 166 ~Gv~i~~~~~V~~i~~~~~~-~~~~~~v~~--~-~g--~~i~ad~VV~A~G~~s~ 214 (413)
.|++++++++|+++.. ++ +++.+.|.+ . +| +++++|.||+|+|.++.
T Consensus 179 ~gv~v~~~~~v~~i~~--~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~ 231 (497)
T 2bry_A 179 LGVEIHWGVKFTGLQP--PPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFV 231 (497)
T ss_dssp TTCEEEESCEEEEEEC--CCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCC
T ss_pred CCCEEEeCCEEEEEEE--ecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCcc
Confidence 9999999999999986 52 124556655 4 66 36899999999999873
No 96
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.23 E-value=7.4e-11 Score=112.24 Aligned_cols=65 Identities=12% Similarity=0.042 Sum_probs=50.2
Q ss_pred eChHHHHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcCC---Cc---EEEcCEEEEcCCCChHHhhh
Q 015088 150 IKPTKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSN---GE---KFWGKKCVVTAGAWVGKLVK 218 (413)
Q Consensus 150 ~~~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~---g~---~i~ad~VV~A~G~~s~~l~~ 218 (413)
.....+.+.+.+.+++.+..++++++|+++.. . ++.|.|++.+ |+ ++.+|.||+|+|.++.+..+
T Consensus 112 ~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~--~--~~~~~V~~~~~~~G~~~~~~~~d~VVvAtG~~s~p~~p 182 (447)
T 2gv8_A 112 PHRHTIQEYQRIYAQPLLPFIKLATDVLDIEK--K--DGSWVVTYKGTKAGSPISKDIFDAVSICNGHYEVPYIP 182 (447)
T ss_dssp CBHHHHHHHHHHHHGGGGGGEECSEEEEEEEE--E--TTEEEEEEEESSTTCCEEEEEESEEEECCCSSSSBCBC
T ss_pred CCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEe--C--CCeEEEEEeecCCCCeeEEEEeCEEEECCCCCCCCCCC
Confidence 34467777888887777888999999999987 6 4567777654 65 69999999999998754433
No 97
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.22 E-value=8.6e-11 Score=105.85 Aligned_cols=36 Identities=25% Similarity=0.374 Sum_probs=33.1
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCC
Q 015088 6 EKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDF 41 (413)
Q Consensus 6 ~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~ 41 (413)
++|||+|||||++|++||++|+++|++|+|||++..
T Consensus 5 ~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~ 40 (304)
T 4fk1_A 5 KYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNTN 40 (304)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCC
T ss_pred CCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 469999999999999999999999999999998754
No 98
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=99.22 E-value=5.5e-10 Score=105.55 Aligned_cols=58 Identities=17% Similarity=0.113 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCChH
Q 015088 153 TKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWVG 214 (413)
Q Consensus 153 ~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s~ 214 (413)
..+.+.|.+.+++.|++|+++++|++|.. ++ +..+.|.+ +|++++||+||+|+|.++.
T Consensus 234 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~--~~-~~v~~v~~-~g~~~~ad~VV~a~~~~~~ 291 (433)
T 1d5t_A 234 GELPQGFARLSAIYGGTYMLNKPVDDIIM--EN-GKVVGVKS-EGEVARCKQLICDPSYVPD 291 (433)
T ss_dssp THHHHHHHHHHHHHTCCCBCSCCCCEEEE--ET-TEEEEEEE-TTEEEECSEEEECGGGCGG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEE--eC-CEEEEEEE-CCeEEECCEEEECCCCCcc
Confidence 68899999999999999999999999987 62 23333554 6777999999999999975
No 99
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.19 E-value=1.7e-10 Score=104.29 Aligned_cols=118 Identities=19% Similarity=0.311 Sum_probs=79.3
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCcccCCCceeecccCCCChHHHHHHHHHHHHHHHHHhCCe
Q 015088 6 EKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESRTIRATYPEDYYHPMVLESCLLWEQAQSEIGYK 85 (413)
Q Consensus 6 ~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~gg~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 85 (413)
+.|||+|||||+||++||.+|+++|++|+|+|+...++... .+.+... .
T Consensus 3 ~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~~-----~G~~~~~--------------------------~ 51 (314)
T 4a5l_A 3 NIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAA-----GGQLTTT--------------------------T 51 (314)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCCT-----TCGGGGS--------------------------S
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCccc-----CCCcCCh--------------------------H
Confidence 46999999999999999999999999999999976542110 0111000 0
Q ss_pred eEEeeceeeeCCCChhhHHHHHHHHhhCCCCccccCHHHHHHHcCCcccCCCCeEEEEecCCceeChHHHHHHHHHHHHH
Q 015088 86 VYFKAHQFDMGPSENKSLRSVIASCRKNSVPHQVLDCRQVLEKYSGRIEIPENWVGVATELGGVIKPTKAVSMFQTLAIK 165 (413)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 165 (413)
.. .+ +|. + +. .+.+..+...+.+.+++
T Consensus 52 ~i-------------------------~~--------------~~g-~--~~-----------~i~~~~l~~~~~~~~~~ 78 (314)
T 4a5l_A 52 II-------------------------EN--------------FPG-F--PN-----------GIDGNELMMNMRTQSEK 78 (314)
T ss_dssp EE-------------------------CC--------------STT-C--TT-----------CEEHHHHHHHHHHHHHH
T ss_pred Hh-------------------------hh--------------ccC-C--cc-----------cCCHHHHHHHHHHHHhh
Confidence 00 00 011 0 00 12345677777888888
Q ss_pred CCCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCC
Q 015088 166 NGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAW 212 (413)
Q Consensus 166 ~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~ 212 (413)
.+.++... .|..+.. . .....+.+.++.++++|.||+|||..
T Consensus 79 ~~~~~~~~-~v~~~~~--~--~~~~~~~~~~~~~~~~~~liiATG~~ 120 (314)
T 4a5l_A 79 YGTTIITE-TIDHVDF--S--TQPFKLFTEEGKEVLTKSVIIATGAT 120 (314)
T ss_dssp TTCEEECC-CEEEEEC--S--SSSEEEEETTCCEEEEEEEEECCCEE
T ss_pred cCcEEEEe-EEEEeec--C--CCceEEEECCCeEEEEeEEEEccccc
Confidence 89998854 5656555 4 35566777788889999999999974
No 100
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=99.19 E-value=1.2e-10 Score=111.28 Aligned_cols=59 Identities=14% Similarity=0.157 Sum_probs=49.7
Q ss_pred hHHHHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEE-cCCCcEEEcCEEEEcCCCChH
Q 015088 152 PTKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVV-TSNGEKFWGKKCVVTAGAWVG 214 (413)
Q Consensus 152 ~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~-~~~g~~i~ad~VV~A~G~~s~ 214 (413)
+..+.+.+.+.+++.|++++++++|+++.. ++ ++.+.|. +.+|+ +.+|.||+|+|...+
T Consensus 210 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~--~~-~~~~~v~~~~~g~-i~aD~Vv~a~G~~p~ 269 (463)
T 4dna_A 210 DQDMRRGLHAAMEEKGIRILCEDIIQSVSA--DA-DGRRVATTMKHGE-IVADQVMLALGRMPN 269 (463)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEE--CT-TSCEEEEESSSCE-EEESEEEECSCEEES
T ss_pred CHHHHHHHHHHHHHCCCEEECCCEEEEEEE--cC-CCEEEEEEcCCCe-EEeCEEEEeeCcccC
Confidence 357788889999999999999999999987 62 2446788 88898 999999999998654
No 101
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.19 E-value=1e-10 Score=105.72 Aligned_cols=58 Identities=16% Similarity=0.232 Sum_probs=47.3
Q ss_pred ChHHHHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCCh
Q 015088 151 KPTKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWV 213 (413)
Q Consensus 151 ~~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s 213 (413)
++..+.+.+.+.+.+.|++++. ++|+++.. + ++.+.+.+.+|+++++|.||+|+|.++
T Consensus 57 ~~~~~~~~l~~~~~~~~v~~~~-~~v~~i~~--~--~~~~~v~~~~g~~~~~~~vv~AtG~~~ 114 (311)
T 2q0l_A 57 SGLDFMQPWQEQCFRFGLKHEM-TAVQRVSK--K--DSHFVILAEDGKTFEAKSVIIATGGSP 114 (311)
T ss_dssp CHHHHHHHHHHHHHTTSCEEEC-SCEEEEEE--E--TTEEEEEETTSCEEEEEEEEECCCEEE
T ss_pred CHHHHHHHHHHHHHHcCCEEEE-EEEEEEEE--c--CCEEEEEEcCCCEEECCEEEECCCCCC
Confidence 4456777777888888999997 78999987 6 456778777887899999999999754
No 102
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=99.19 E-value=5.1e-10 Score=106.70 Aligned_cols=45 Identities=33% Similarity=0.338 Sum_probs=40.3
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCcccC
Q 015088 6 EKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHG 50 (413)
Q Consensus 6 ~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~gg~~~s~~ 50 (413)
.++||+|||||++|+++|++|+++|++|+|+|++...||+..+..
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~ 48 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTWTDT 48 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCCEEE
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCceeccc
Confidence 468999999999999999999999999999999998887765543
No 103
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.18 E-value=1.1e-10 Score=106.71 Aligned_cols=58 Identities=14% Similarity=0.125 Sum_probs=47.0
Q ss_pred ChHHHHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEc---CCCcEEEcCEEEEcCCCCh
Q 015088 151 KPTKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVT---SNGEKFWGKKCVVTAGAWV 213 (413)
Q Consensus 151 ~~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~---~~g~~i~ad~VV~A~G~~s 213 (413)
.+..+...+.+.+++.|+++++++ |+++.. + ++.+.+.+ .++.++.+|.||+|+|...
T Consensus 82 ~~~~~~~~~~~~~~~~gv~i~~~~-v~~i~~--~--~~~~~v~~~~~~~~~~~~~d~vvlAtG~~~ 142 (338)
T 3itj_A 82 TGSELMDRMREQSTKFGTEIITET-VSKVDL--S--SKPFKLWTEFNEDAEPVTTDAIILATGASA 142 (338)
T ss_dssp EHHHHHHHHHHHHHHTTCEEECSC-EEEEEC--S--SSSEEEEETTCSSSCCEEEEEEEECCCEEE
T ss_pred CHHHHHHHHHHHHHHcCCEEEEeE-EEEEEE--c--CCEEEEEEEecCCCcEEEeCEEEECcCCCc
Confidence 346777888888889999999988 999987 6 46777776 3566799999999999853
No 104
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=99.18 E-value=2.3e-10 Score=108.18 Aligned_cols=46 Identities=24% Similarity=0.376 Sum_probs=41.4
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHcC-CcEEEEcccCCCCCCCcccC
Q 015088 5 GEKFDVIVVGAGIMGSSAAYQLAKRG-QKTLLLEQFDFLHHRGSSHG 50 (413)
Q Consensus 5 ~~~~dvvIIGaG~aG~~~A~~L~~~g-~~V~liE~~~~~gg~~~s~~ 50 (413)
..++||+|||||++|+++|++|+++| ++|+|+|+++..||+..+..
T Consensus 4 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~~t~~ 50 (424)
T 2b9w_A 4 SKDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCHSPN 50 (424)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCCCCE
T ss_pred CCCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcccccC
Confidence 35689999999999999999999999 89999999999988776654
No 105
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=99.17 E-value=1.4e-09 Score=102.40 Aligned_cols=71 Identities=14% Similarity=0.086 Sum_probs=56.8
Q ss_pred ChHHHHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCChH-HhhhhhcCCcc
Q 015088 151 KPTKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWVG-KLVKRITGLEL 225 (413)
Q Consensus 151 ~~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s~-~l~~~~~g~~~ 225 (413)
.+..+.+.+.+.+++.|++++++++|+++.. ++ +....|.+.+|+++.+|.||+|+|...+ .++..+ ++..
T Consensus 192 ~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~--~~-~~v~~v~l~dG~~i~aD~Vv~a~G~~p~~~l~~~~-gl~~ 263 (415)
T 3lxd_A 192 AGEALSEFYQAEHRAHGVDLRTGAAMDCIEG--DG-TKVTGVRMQDGSVIPADIVIVGIGIVPCVGALISA-GASG 263 (415)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEETCCEEEEEE--SS-SBEEEEEESSSCEEECSEEEECSCCEESCHHHHHT-TCCC
T ss_pred cCHHHHHHHHHHHHhCCCEEEECCEEEEEEe--cC-CcEEEEEeCCCCEEEcCEEEECCCCccChHHHHhC-CCCc
Confidence 3567888899999999999999999999987 62 2445788889988999999999998765 466554 5543
No 106
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.16 E-value=1.6e-10 Score=110.30 Aligned_cols=71 Identities=17% Similarity=0.064 Sum_probs=53.1
Q ss_pred eChHHHHHHHHHHHHHCCCE--EEcCceEEEEEEecccCCCeEEEEcCC---C--cEEEcCEEEEcCCCChHHhhhhhcC
Q 015088 150 IKPTKAVSMFQTLAIKNGAV--LRDNMEVKTVLKVKDAVKGGVTVVTSN---G--EKFWGKKCVVTAGAWVGKLVKRITG 222 (413)
Q Consensus 150 ~~~~~~~~~l~~~~~~~Gv~--i~~~~~V~~i~~~~~~~~~~~~v~~~~---g--~~i~ad~VV~A~G~~s~~l~~~~~g 222 (413)
.....+.+.+.+.+++.|++ ++++++|+++.. .++.+.|.|++.+ | .++.+|.||+|+|.++.+..+.+.|
T Consensus 98 ~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~--~~~~~~~~V~~~~~~~g~~~~~~~d~VVvAtG~~s~p~~p~ipG 175 (464)
T 2xve_A 98 PPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEF--NEDSQTFTVTVQDHTTDTIYSEEFDYVVCCTGHFSTPYVPEFEG 175 (464)
T ss_dssp CBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEE--ETTTTEEEEEEEETTTTEEEEEEESEEEECCCSSSSBCCCCCBT
T ss_pred CCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEE--cCCCCcEEEEEEEcCCCceEEEEcCEEEECCCCCCCCccCCCCC
Confidence 35567888888888888988 999999999988 6333477777654 4 4689999999999876554444334
No 107
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.16 E-value=1.3e-10 Score=106.17 Aligned_cols=57 Identities=12% Similarity=0.149 Sum_probs=46.4
Q ss_pred ChHHHHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCCh
Q 015088 151 KPTKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWV 213 (413)
Q Consensus 151 ~~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s 213 (413)
++..+...+.+.+++.|++++.++ |+++.. + ++.+.|.+ +|+++++|.||+|+|.++
T Consensus 68 ~~~~~~~~l~~~~~~~gv~~~~~~-v~~i~~--~--~~~~~v~~-~~~~~~~~~vv~A~G~~~ 124 (333)
T 1vdc_A 68 LGVELTDKFRKQSERFGTTIFTET-VTKVDF--S--SKPFKLFT-DSKAILADAVILAIGAVA 124 (333)
T ss_dssp EHHHHHHHHHHHHHHTTCEEECCC-CCEEEC--S--SSSEEEEC-SSEEEEEEEEEECCCEEE
T ss_pred CHHHHHHHHHHHHHHCCCEEEEeE-EEEEEE--c--CCEEEEEE-CCcEEEcCEEEECCCCCc
Confidence 345677778888888999999886 889877 5 45677887 677799999999999875
No 108
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.15 E-value=3.6e-10 Score=101.58 Aligned_cols=38 Identities=32% Similarity=0.369 Sum_probs=34.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHc--CCcEEEEcccCCCCC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKR--GQKTLLLEQFDFLHH 44 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~--g~~V~liE~~~~~gg 44 (413)
.+||+|||||++|+++|++|+++ |++|+|||+....++
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GG 118 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGG 118 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCT
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCC
Confidence 58999999999999999999997 999999999877643
No 109
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.15 E-value=3.3e-10 Score=102.71 Aligned_cols=55 Identities=22% Similarity=0.431 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCCh
Q 015088 153 TKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWV 213 (413)
Q Consensus 153 ~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s 213 (413)
..+...+.+.+++.|+++++ .+|+++.. + ++.+.|.+ ++.++++|+||+|+|.+.
T Consensus 72 ~~~~~~~~~~~~~~~v~~~~-~~v~~i~~--~--~~~~~v~~-~~~~~~~~~li~AtG~~~ 126 (319)
T 3cty_A 72 SELAKLFADHAANYAKIREG-VEVRSIKK--T--QGGFDIET-NDDTYHAKYVIITTGTTH 126 (319)
T ss_dssp HHHHHHHHHHHHTTSEEEET-CCEEEEEE--E--TTEEEEEE-SSSEEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHHHHcCCEEEE-eeEEEEEE--e--CCEEEEEE-CCCEEEeCEEEECCCCCc
Confidence 45666677778888999997 78999987 5 45677777 455699999999999754
No 110
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.14 E-value=2.2e-10 Score=104.21 Aligned_cols=117 Identities=23% Similarity=0.266 Sum_probs=80.7
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCcccCCCceeecccCCCChHHHHHHHHHHHHHHHHHhCC
Q 015088 5 GEKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESRTIRATYPEDYYHPMVLESCLLWEQAQSEIGY 84 (413)
Q Consensus 5 ~~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~gg~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 84 (413)
..++||+|||||++|+++|+.|+++|++|+|||+.. .|+..... .
T Consensus 6 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~gg~~~~~---~------------------------------- 50 (325)
T 2q7v_A 6 AHDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKGM-PGGQIAWS---E------------------------------- 50 (325)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTGGGGGC---S-------------------------------
T ss_pred cccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCCC-CCcccccc---c-------------------------------
Confidence 456899999999999999999999999999999983 32211000 0
Q ss_pred eeEEeeceeeeCCCChhhHHHHHHHHhhCCCCccccCHHHHHHHcCCcccCCCCeEEEEecCCceeChHHHHHHHHHHHH
Q 015088 85 KVYFKAHQFDMGPSENKSLRSVIASCRKNSVPHQVLDCRQVLEKYSGRIEIPENWVGVATELGGVIKPTKAVSMFQTLAI 164 (413)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 164 (413)
. + . .++. + + ..+....+.+.+.+.++
T Consensus 51 ~-------~------------------------~---------~~~~-~--~-----------~~~~~~~~~~~l~~~~~ 76 (325)
T 2q7v_A 51 E-------V------------------------E---------NFPG-F--P-----------EPIAGMELAQRMHQQAE 76 (325)
T ss_dssp C-------B------------------------C---------CSTT-C--S-----------SCBCHHHHHHHHHHHHH
T ss_pred c-------c------------------------c---------cCCC-C--C-----------CCCCHHHHHHHHHHHHH
Confidence 0 0 0 0000 0 0 01233566777778888
Q ss_pred HCCCEEEcCceEEEEEEeccc-CCCeEEEEcCCCcEEEcCEEEEcCCCCh
Q 015088 165 KNGAVLRDNMEVKTVLKVKDA-VKGGVTVVTSNGEKFWGKKCVVTAGAWV 213 (413)
Q Consensus 165 ~~Gv~i~~~~~V~~i~~~~~~-~~~~~~v~~~~g~~i~ad~VV~A~G~~s 213 (413)
+.|++++. .+|+++.. +. ++..+.+.+.+|+++++|+||+|+|.+.
T Consensus 77 ~~gv~~~~-~~v~~i~~--~~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~ 123 (325)
T 2q7v_A 77 KFGAKVEM-DEVQGVQH--DATSHPYPFTVRGYNGEYRAKAVILATGADP 123 (325)
T ss_dssp HTTCEEEE-CCEEEEEE--CTTSSSCCEEEEESSCEEEEEEEEECCCEEE
T ss_pred HcCCEEEe-eeEEEEEe--ccCCCceEEEEECCCCEEEeCEEEECcCCCc
Confidence 88999987 68999977 51 1122667777777899999999999854
No 111
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=99.13 E-value=3.7e-10 Score=113.39 Aligned_cols=42 Identities=38% Similarity=0.387 Sum_probs=37.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCcc
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSS 48 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~gg~~~s 48 (413)
.+||+|||||++|+++|+.|++.|++|+|+|+....||+..+
T Consensus 336 ~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ggri~T 377 (776)
T 4gut_A 336 NKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGGRVWD 377 (776)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTTCCE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceeceeee
Confidence 479999999999999999999999999999999888775443
No 112
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.13 E-value=3.6e-10 Score=101.24 Aligned_cols=58 Identities=10% Similarity=0.047 Sum_probs=45.7
Q ss_pred ChHHHHHHHHHHHHHC-CCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCCh
Q 015088 151 KPTKAVSMFQTLAIKN-GAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWV 213 (413)
Q Consensus 151 ~~~~~~~~l~~~~~~~-Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s 213 (413)
.+..+...+.+.+.+. +++++ +++|+++.. + ++.+.+.+.+|+++++|.||+|+|...
T Consensus 54 ~~~~~~~~~~~~~~~~~~v~~~-~~~v~~i~~--~--~~~~~v~~~~g~~~~~d~vviAtG~~~ 112 (297)
T 3fbs_A 54 APGEIIAEARRQIERYPTIHWV-EGRVTDAKG--S--FGEFIVEIDGGRRETAGRLILAMGVTD 112 (297)
T ss_dssp CHHHHHHHHHHHHTTCTTEEEE-ESCEEEEEE--E--TTEEEEEETTSCEEEEEEEEECCCCEE
T ss_pred CHHHHHHHHHHHHHhcCCeEEE-EeEEEEEEE--c--CCeEEEEECCCCEEEcCEEEECCCCCC
Confidence 3356667777777776 67776 469999988 6 467889998888899999999999854
No 113
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=99.12 E-value=3.4e-10 Score=108.49 Aligned_cols=45 Identities=27% Similarity=0.230 Sum_probs=39.9
Q ss_pred CCCcccEEEECCCHHHHHHHHHHHHcC-CcEEEEcccCCCCCCCcc
Q 015088 4 PGEKFDVIVVGAGIMGSSAAYQLAKRG-QKTLLLEQFDFLHHRGSS 48 (413)
Q Consensus 4 ~~~~~dvvIIGaG~aG~~~A~~L~~~g-~~V~liE~~~~~gg~~~s 48 (413)
+..++||+|||||++|+++|++|+++| .+|+|+|+++..||...+
T Consensus 6 ~~~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~~ 51 (484)
T 4dsg_A 6 ELLTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSRS 51 (484)
T ss_dssp -CCSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGCE
T ss_pred cccCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeeee
Confidence 345789999999999999999999998 799999999988877666
No 114
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=99.12 E-value=8.8e-10 Score=106.13 Aligned_cols=45 Identities=29% Similarity=0.337 Sum_probs=40.2
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCccc
Q 015088 5 GEKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSH 49 (413)
Q Consensus 5 ~~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~gg~~~s~ 49 (413)
...+||+|||||++|+++|++|+++|++|+|+|+++..||+..+.
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~~~~~ 53 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGRVWTA 53 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCCEE
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCceeee
Confidence 456899999999999999999999999999999999988865443
No 115
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=99.12 E-value=3.2e-10 Score=109.93 Aligned_cols=44 Identities=41% Similarity=0.495 Sum_probs=40.4
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcC-CcEEEEcccCCCCCCCccc
Q 015088 6 EKFDVIVVGAGIMGSSAAYQLAKRG-QKTLLLEQFDFLHHRGSSH 49 (413)
Q Consensus 6 ~~~dvvIIGaG~aG~~~A~~L~~~g-~~V~liE~~~~~gg~~~s~ 49 (413)
..+||+|||||++|++||++|+++| ++|+|+|+++.+||+..+.
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~~t~ 51 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRLQTV 51 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTCCEE
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCceeee
Confidence 4689999999999999999999999 9999999999999887654
No 116
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=99.12 E-value=7.7e-10 Score=105.82 Aligned_cols=58 Identities=12% Similarity=0.132 Sum_probs=48.2
Q ss_pred hHHHHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCChH
Q 015088 152 PTKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWVG 214 (413)
Q Consensus 152 ~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s~ 214 (413)
+..+.+.+.+.+++.|++++++++|+++.. + ++.+.+.+++ .++++|.||+|+|.+.+
T Consensus 215 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~--~--~~~~~v~~~~-~~i~aD~Vv~a~G~~p~ 272 (467)
T 1zk7_A 215 DPAIGEAVTAAFRAEGIEVLEHTQASQVAH--M--DGEFVLTTTH-GELRADKLLVATGRTPN 272 (467)
T ss_dssp CHHHHHHHHHHHHHTTCEEETTCCEEEEEE--E--TTEEEEEETT-EEEEESEEEECSCEEES
T ss_pred CHHHHHHHHHHHHhCCCEEEcCCEEEEEEE--e--CCEEEEEECC-cEEEcCEEEECCCCCcC
Confidence 457788899999999999999999999987 6 4566677764 46999999999998764
No 117
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=99.10 E-value=2.6e-10 Score=109.93 Aligned_cols=59 Identities=20% Similarity=0.295 Sum_probs=50.2
Q ss_pred hHHHHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCChH
Q 015088 152 PTKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWVG 214 (413)
Q Consensus 152 ~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s~ 214 (413)
+..+.+.+.+.+++.|++++++++|+++.. + ++.+.+.+.+|+++++|.||+|+|.+.+
T Consensus 222 d~~~~~~l~~~l~~~GV~i~~~~~V~~i~~--~--~~~v~v~~~~g~~i~aD~Vv~a~G~~p~ 280 (499)
T 1xdi_A 222 DADAALVLEESFAERGVRLFKNARAASVTR--T--GAGVLVTMTDGRTVEGSHALMTIGSVPN 280 (499)
T ss_dssp SHHHHHHHHHHHHHTTCEEETTCCEEEEEE--C--SSSEEEEETTSCEEEESEEEECCCEEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCEEEEEEE--e--CCEEEEEECCCcEEEcCEEEECCCCCcC
Confidence 356778888999999999999999999987 6 3457787888888999999999998764
No 118
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=99.09 E-value=3.3e-09 Score=94.86 Aligned_cols=39 Identities=41% Similarity=0.424 Sum_probs=35.3
Q ss_pred CcccEEEECCCHHHHHHHHHHHHc--CCcEEEEcccCCCCC
Q 015088 6 EKFDVIVVGAGIMGSSAAYQLAKR--GQKTLLLEQFDFLHH 44 (413)
Q Consensus 6 ~~~dvvIIGaG~aG~~~A~~L~~~--g~~V~liE~~~~~gg 44 (413)
..+||+|||||++|+++|+.|+++ |++|+|+|+....++
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~gg 104 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGG 104 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCT
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccc
Confidence 357999999999999999999998 999999999887753
No 119
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=99.09 E-value=1.3e-09 Score=101.59 Aligned_cols=69 Identities=19% Similarity=0.109 Sum_probs=56.5
Q ss_pred hHHHHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCChH-HhhhhhcCCcc
Q 015088 152 PTKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWVG-KLVKRITGLEL 225 (413)
Q Consensus 152 ~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s~-~l~~~~~g~~~ 225 (413)
+..+.+.+.+.+++.|++++++++|+++.. + ++.+.+.+.+|+++++|.||+|+|.+.+ .++..+ ++.+
T Consensus 186 ~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~--~--~~~~~v~~~~g~~i~~d~vv~a~G~~p~~~l~~~~-g~~~ 255 (384)
T 2v3a_A 186 HPAAAKAVQAGLEGLGVRFHLGPVLASLKK--A--GEGLEAHLSDGEVIPCDLVVSAVGLRPRTELAFAA-GLAV 255 (384)
T ss_dssp CHHHHHHHHHHHHTTTCEEEESCCEEEEEE--E--TTEEEEEETTSCEEEESEEEECSCEEECCHHHHHT-TCCB
T ss_pred CHHHHHHHHHHHHHcCCEEEeCCEEEEEEe--c--CCEEEEEECCCCEEECCEEEECcCCCcCHHHHHHC-CCCC
Confidence 567888899999999999999999999987 6 4567888888888999999999998765 366555 5443
No 120
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=99.09 E-value=1.1e-09 Score=104.90 Aligned_cols=68 Identities=21% Similarity=0.267 Sum_probs=54.7
Q ss_pred hHHHHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCChH-HhhhhhcCCc
Q 015088 152 PTKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWVG-KLVKRITGLE 224 (413)
Q Consensus 152 ~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s~-~l~~~~~g~~ 224 (413)
+..+.+.+.+.+++.|++++++++|+++.. + ++.+.+.+.+|+++.+|.||+|+|...+ .++..+ |+.
T Consensus 201 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~--~--~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~~l~~~~-gl~ 269 (472)
T 3iwa_A 201 SKSLSQMLRHDLEKNDVVVHTGEKVVRLEG--E--NGKVARVITDKRTLDADLVILAAGVSPNTQLARDA-GLE 269 (472)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEE--S--SSBEEEEEESSCEEECSEEEECSCEEECCHHHHHH-TCC
T ss_pred CHHHHHHHHHHHHhcCCEEEeCCEEEEEEc--c--CCeEEEEEeCCCEEEcCEEEECCCCCcCHHHHHhC-Ccc
Confidence 357788888999999999999999999987 6 4556677778888999999999998754 455554 543
No 121
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=99.08 E-value=5.9e-10 Score=100.58 Aligned_cols=59 Identities=17% Similarity=0.182 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHHCCCEEEcCceEEEEEEecccC-CCeEEEEcCCCcEEEcCEEEEcCCCCh
Q 015088 153 TKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAV-KGGVTVVTSNGEKFWGKKCVVTAGAWV 213 (413)
Q Consensus 153 ~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~-~~~~~v~~~~g~~i~ad~VV~A~G~~s 213 (413)
..+...+.+.+++.|++++++++|+.+.. +.. ++.+.+.+.+|+++++|+||+|+|.+.
T Consensus 56 ~~~~~~~~~~~~~~~v~~~~~~~v~~i~~--~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~ 115 (310)
T 1fl2_A 56 QKLAGALKVHVDEYDVDVIDSQSASKLIP--AAVEGGLHQIETASGAVLKARSIIVATGAKW 115 (310)
T ss_dssp HHHHHHHHHHHHTSCEEEECSCCEEEEEC--CSSTTCCEEEEETTSCEEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHHHHcCCeEEccCEEEEEEe--cccCCceEEEEECCCCEEEeCEEEECcCCCc
Confidence 45667777778888999999999999976 421 246888888887799999999999854
No 122
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.08 E-value=8.2e-10 Score=99.80 Aligned_cols=38 Identities=29% Similarity=0.352 Sum_probs=34.3
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCC
Q 015088 5 GEKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFL 42 (413)
Q Consensus 5 ~~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~ 42 (413)
+..|||+|||||+||++||.+|+++|++|+|||+...+
T Consensus 4 e~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~~g 41 (312)
T 4gcm_A 4 EIDFDIAIIGAGPAGMTAAVYASRANLKTVMIERGIPG 41 (312)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCC
Confidence 34699999999999999999999999999999986543
No 123
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=99.07 E-value=1.1e-09 Score=105.08 Aligned_cols=60 Identities=10% Similarity=0.007 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcCCC-cEEEcCEEEEcCCCChH
Q 015088 153 TKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNG-EKFWGKKCVVTAGAWVG 214 (413)
Q Consensus 153 ~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g-~~i~ad~VV~A~G~~s~ 214 (413)
..+.+.+.+.+++.|++++++++|+++.. ++++..+.|.+.+| +++.+|.||+|+|...+
T Consensus 226 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~--~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~ 286 (479)
T 2hqm_A 226 ECIQNTITDHYVKEGINVHKLSKIVKVEK--NVETDKLKIHMNDSKSIDDVDELIWTIGRKSH 286 (479)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEE--CC-CCCEEEEETTSCEEEEESEEEECSCEEEC
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEE--cCCCcEEEEEECCCcEEEEcCEEEECCCCCCc
Confidence 56777888888999999999999999987 52222477888888 67999999999997543
No 124
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=99.06 E-value=4.5e-09 Score=100.22 Aligned_cols=58 Identities=14% Similarity=0.083 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcCCCc-EEEcCEEEEcCCCChH
Q 015088 153 TKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGE-KFWGKKCVVTAGAWVG 214 (413)
Q Consensus 153 ~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~-~i~ad~VV~A~G~~s~ 214 (413)
..+.+.+.+.+++.|++++++++|+++.. + ++.+.+.+.+|+ ++.+|.||+|+|...+
T Consensus 207 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~--~--~~~~~v~~~~G~~~i~~D~vv~a~G~~p~ 265 (463)
T 2r9z_A 207 PLLSATLAENMHAQGIETHLEFAVAALER--D--AQGTTLVAQDGTRLEGFDSVIWAVGRAPN 265 (463)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEEE--E--TTEEEEEETTCCEEEEESEEEECSCEEES
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEE--e--CCeEEEEEeCCcEEEEcCEEEECCCCCcC
Confidence 46677888889999999999999999987 5 345778888888 8999999999997653
No 125
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=99.06 E-value=9.2e-10 Score=105.97 Aligned_cols=58 Identities=16% Similarity=0.223 Sum_probs=45.6
Q ss_pred hHHHHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcC---CC--cEEEcCEEEEcCCCCh
Q 015088 152 PTKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTS---NG--EKFWGKKCVVTAGAWV 213 (413)
Q Consensus 152 ~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~---~g--~~i~ad~VV~A~G~~s 213 (413)
+..+.+.+.+.+++.|++++++++|.++.. + ++.+.+... +| +++.+|.||+|+|...
T Consensus 238 d~~~~~~l~~~l~~~gV~v~~~~~v~~i~~--~--~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~~p 300 (491)
T 3urh_A 238 DGEVAKQLQRMLTKQGIDFKLGAKVTGAVK--S--GDGAKVTFEPVKGGEATTLDAEVVLIATGRKP 300 (491)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSEEEEEEEE--E--TTEEEEEEEETTSCCCEEEEESEEEECCCCEE
T ss_pred CHHHHHHHHHHHHhCCCEEEECCeEEEEEE--e--CCEEEEEEEecCCCceEEEEcCEEEEeeCCcc
Confidence 356778888889999999999999999987 6 344545443 24 4799999999999754
No 126
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=99.05 E-value=3.3e-09 Score=101.68 Aligned_cols=58 Identities=19% Similarity=0.100 Sum_probs=45.7
Q ss_pred hHHHHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcCC--C-cEEEcCEEEEcCCCCh
Q 015088 152 PTKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSN--G-EKFWGKKCVVTAGAWV 213 (413)
Q Consensus 152 ~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~--g-~~i~ad~VV~A~G~~s 213 (413)
+..+.+.+.+.+++.|++++++++|+++.. + ++.+.+...+ | +++.+|.||+|+|...
T Consensus 220 ~~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~--~--~~~~~v~~~~~~g~~~~~~D~vi~a~G~~p 280 (476)
T 3lad_A 220 DEQVAKEAQKILTKQGLKILLGARVTGTEV--K--NKQVTVKFVDAEGEKSQAFDKLIVAVGRRP 280 (476)
T ss_dssp CHHHHHHHHHHHHHTTEEEEETCEEEEEEE--C--SSCEEEEEESSSEEEEEEESEEEECSCEEE
T ss_pred CHHHHHHHHHHHHhCCCEEEECCEEEEEEE--c--CCEEEEEEEeCCCcEEEECCEEEEeeCCcc
Confidence 356778888889999999999999999987 6 3445555443 3 5799999999999743
No 127
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=99.05 E-value=2.3e-09 Score=101.90 Aligned_cols=59 Identities=17% Similarity=0.146 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCChH
Q 015088 153 TKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWVG 214 (413)
Q Consensus 153 ~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s~ 214 (413)
..+.+.+.+.+++.|++++++++|+++.. ++ ++.+.+.+.+|+++++|.||+|+|...+
T Consensus 208 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~--~~-~~~~~v~~~~g~~i~~D~vv~a~G~~p~ 266 (450)
T 1ges_A 208 PMISETLVEVMNAEGPQLHTNAIPKAVVK--NT-DGSLTLELEDGRSETVDCLIWAIGREPA 266 (450)
T ss_dssp HHHHHHHHHHHHHHSCEEECSCCEEEEEE--CT-TSCEEEEETTSCEEEESEEEECSCEEES
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEE--eC-CcEEEEEECCCcEEEcCEEEECCCCCcC
Confidence 46778888889999999999999999987 52 2347788888888999999999997654
No 128
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=99.05 E-value=8.4e-09 Score=96.66 Aligned_cols=70 Identities=17% Similarity=0.200 Sum_probs=56.6
Q ss_pred hHHHHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCChH-HhhhhhcCCcc
Q 015088 152 PTKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWVG-KLVKRITGLEL 225 (413)
Q Consensus 152 ~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s~-~l~~~~~g~~~ 225 (413)
+..+.+.+.+.+++.|++++++++|+++.. ++ +....|.+.+|+++.+|.||+|+|...+ .+++.+ ++.+
T Consensus 183 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~--~~-~~v~~V~~~dG~~i~aD~Vv~a~G~~p~~~l~~~~-gl~~ 253 (404)
T 3fg2_P 183 TPEISSYFHDRHSGAGIRMHYGVRATEIAA--EG-DRVTGVVLSDGNTLPCDLVVVGVGVIPNVEIAAAA-GLPT 253 (404)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEE--ET-TEEEEEEETTSCEEECSEEEECCCEEECCHHHHHT-TCCB
T ss_pred CHHHHHHHHHHHHhCCcEEEECCEEEEEEe--cC-CcEEEEEeCCCCEEEcCEEEECcCCccCHHHHHhC-CCCC
Confidence 467888899999999999999999999987 52 2455688889988999999999998664 466655 5544
No 129
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=99.04 E-value=2.2e-09 Score=102.35 Aligned_cols=58 Identities=19% Similarity=0.263 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCChH
Q 015088 153 TKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWVG 214 (413)
Q Consensus 153 ~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s~ 214 (413)
..+.+.+.+.+++.|++++++++|+++.. + ++.+.+.+.+|+++++|.||+|+|...+
T Consensus 208 ~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~--~--~~~v~v~~~~g~~i~~D~vv~A~G~~p~ 265 (455)
T 2yqu_A 208 LEVSRAAERVFKKQGLTIRTGVRVTAVVP--E--AKGARVELEGGEVLEADRVLVAVGRRPY 265 (455)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEE--E--TTEEEEEETTSCEEEESEEEECSCEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEECCEEEEEEE--e--CCEEEEEECCCeEEEcCEEEECcCCCcC
Confidence 56778888888889999999999999987 6 4567777777888999999999998764
No 130
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=99.03 E-value=1.3e-09 Score=98.87 Aligned_cols=56 Identities=9% Similarity=0.062 Sum_probs=43.5
Q ss_pred hHHHHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCCh
Q 015088 152 PTKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWV 213 (413)
Q Consensus 152 ~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s 213 (413)
+..+...+.+.+++.|++++.++ |+++.. + ++.+.+ +.++.++.+|+||+|+|...
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~-v~~i~~--~--~~~~~v-~~~~~~~~~~~lv~AtG~~~ 116 (320)
T 1trb_A 61 GPLLMERMHEHATKFETEIIFDH-INKVDL--Q--NRPFRL-NGDNGEYTCDALIIATGASA 116 (320)
T ss_dssp HHHHHHHHHHHHHHTTCEEECCC-EEEEEC--S--SSSEEE-EESSCEEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHHHHHCCCEEEEee-eeEEEe--c--CCEEEE-EeCCCEEEcCEEEECCCCCc
Confidence 34566677777888899999886 888877 5 456666 55677799999999999754
No 131
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=99.03 E-value=2e-09 Score=102.94 Aligned_cols=58 Identities=12% Similarity=0.067 Sum_probs=45.2
Q ss_pred HHHHHHHHHHH-HHCCCEEEcCceEEEEEEecccCCCeEEEEcC--CC--cEEEcCEEEEcCCCChH
Q 015088 153 TKAVSMFQTLA-IKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTS--NG--EKFWGKKCVVTAGAWVG 214 (413)
Q Consensus 153 ~~~~~~l~~~~-~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~--~g--~~i~ad~VV~A~G~~s~ 214 (413)
..+.+.+.+.+ ++.|++++++++|+++.. + ++.+.+.+. +| +++++|.||+|+|...+
T Consensus 215 ~~~~~~l~~~l~~~~gv~i~~~~~v~~i~~--~--~~~~~v~~~~~~g~~~~i~~D~vv~a~G~~p~ 277 (468)
T 2qae_A 215 EDVTNALVGALAKNEKMKFMTSTKVVGGTN--N--GDSVSLEVEGKNGKRETVTCEALLVSVGRRPF 277 (468)
T ss_dssp HHHHHHHHHHHHHHTCCEEECSCEEEEEEE--C--SSSEEEEEECC---EEEEEESEEEECSCEEEC
T ss_pred HHHHHHHHHHHhhcCCcEEEeCCEEEEEEE--c--CCeEEEEEEcCCCceEEEECCEEEECCCcccC
Confidence 56778888888 899999999999999987 6 334555543 56 57999999999998654
No 132
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=99.03 E-value=1.2e-09 Score=99.75 Aligned_cols=56 Identities=23% Similarity=0.329 Sum_probs=43.5
Q ss_pred hHHHHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEE-EcCCCcEEEcCEEEEcCCCCh
Q 015088 152 PTKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTV-VTSNGEKFWGKKCVVTAGAWV 213 (413)
Q Consensus 152 ~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v-~~~~g~~i~ad~VV~A~G~~s 213 (413)
...+...+.+.+++.|+++++++ |.++.. . +.+.| .+.+|+++++|+||+|+|...
T Consensus 70 ~~~~~~~l~~~~~~~~v~~~~~~-v~~i~~--~---~~~~v~~~~~g~~~~~d~lviAtG~~~ 126 (335)
T 2a87_A 70 GPELMDEMREQALRFGADLRMED-VESVSL--H---GPLKSVVTADGQTHRARAVILAMGAAA 126 (335)
T ss_dssp HHHHHHHHHHHHHHTTCEEECCC-EEEEEC--S---SSSEEEEETTSCEEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHHHHHcCCEEEEee-EEEEEe--C---CcEEEEEeCCCCEEEeCEEEECCCCCc
Confidence 34566777777888899999886 888865 3 44566 677787899999999999854
No 133
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.03 E-value=2.5e-10 Score=109.18 Aligned_cols=57 Identities=16% Similarity=0.056 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHHCCCEEEcCceEEEEEEecccC-CCe--EEEEcCCCc----EEEcCEEEEcCCC
Q 015088 153 TKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAV-KGG--VTVVTSNGE----KFWGKKCVVTAGA 211 (413)
Q Consensus 153 ~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~-~~~--~~v~~~~g~----~i~ad~VV~A~G~ 211 (413)
..+...+...+++.+++++++++|+++.. +++ ++. +.|.+.+|. ++++|+||+|+|.
T Consensus 127 ~~~~~~l~~~~~~~~~~i~~~~~V~~i~~--~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlAtG~ 190 (463)
T 3s5w_A 127 MEFNDYLRWVASHFQEQSRYGEEVLRIEP--MLSAGQVEALRVISRNADGEELVRTTRALVVSPGG 190 (463)
T ss_dssp HHHHHHHHHHHTTCTTTEEESEEEEEEEE--EEETTEEEEEEEEEEETTSCEEEEEESEEEECCCC
T ss_pred HHHHHHHHHHHHHcCCeEEeCCEEEEEEE--ecCCCceEEEEEEEecCCCceEEEEeCEEEECCCC
Confidence 45666677777777899999999999987 521 233 467766664 7999999999997
No 134
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=99.02 E-value=9.3e-10 Score=105.64 Aligned_cols=40 Identities=35% Similarity=0.601 Sum_probs=35.7
Q ss_pred CCCcccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCC
Q 015088 4 PGEKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLH 43 (413)
Q Consensus 4 ~~~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~g 43 (413)
|+.++||+|||||++|+++|+.|++.|++|+|||++...|
T Consensus 3 m~~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~G 42 (482)
T 1ojt_A 3 ADAEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLG 42 (482)
T ss_dssp SEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSS
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCC
Confidence 3457999999999999999999999999999999976554
No 135
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=99.00 E-value=1.4e-09 Score=103.91 Aligned_cols=39 Identities=36% Similarity=0.486 Sum_probs=35.2
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCC
Q 015088 6 EKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHH 44 (413)
Q Consensus 6 ~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~gg 44 (413)
.++||+|||||++|+++|..|+++|++|+|||+.+..||
T Consensus 3 ~~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG 41 (466)
T 3l8k_A 3 LKYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGG 41 (466)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSH
T ss_pred ccceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCC
Confidence 369999999999999999999999999999998776643
No 136
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=99.00 E-value=1e-10 Score=108.94 Aligned_cols=51 Identities=10% Similarity=-0.079 Sum_probs=41.6
Q ss_pred eeChHHHHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCChH
Q 015088 149 VIKPTKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWVG 214 (413)
Q Consensus 149 ~~~~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s~ 214 (413)
.++...+.+.|.+.+.+.|++++++++|++++. . . ++++|.||.|+|.+|.
T Consensus 94 ~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~---~----------~~~ad~vV~AdG~~S~ 144 (381)
T 3c4a_A 94 GVERRGLVHALRDKCRSQGIAIRFESPLLEHGE--L---P----------LADYDLVVLANGVNHK 144 (381)
T ss_dssp EEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGG--C---C----------GGGCSEEEECCGGGGG
T ss_pred eecHHHHHHHHHHHHHHCCCEEEeCCEeccchh--c---c----------cccCCEEEECCCCCch
Confidence 355678899999999999999999999987743 2 0 2579999999999885
No 137
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=99.00 E-value=1e-09 Score=105.35 Aligned_cols=39 Identities=31% Similarity=0.402 Sum_probs=35.1
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCC
Q 015088 5 GEKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLH 43 (413)
Q Consensus 5 ~~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~g 43 (413)
..++||+|||||++|+++|+.|+++|++|+|||++...|
T Consensus 3 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~G 41 (478)
T 1v59_A 3 NKSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLG 41 (478)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcC
Confidence 346899999999999999999999999999999976554
No 138
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.99 E-value=1.4e-09 Score=104.57 Aligned_cols=59 Identities=19% Similarity=0.143 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCChH
Q 015088 153 TKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWVG 214 (413)
Q Consensus 153 ~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s~ 214 (413)
..+.+.+.+.+++.|++++++++|+++.. ++ ++.+.|.+.+|+++.+|.||+|+|...+
T Consensus 231 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~--~~-~~~~~v~~~~G~~i~~D~vv~a~G~~p~ 289 (490)
T 1fec_A 231 SELRKQLTEQLRANGINVRTHENPAKVTK--NA-DGTRHVVFESGAEADYDVVMLAIGRVPR 289 (490)
T ss_dssp HHHHHHHHHHHHHTTEEEEETCCEEEEEE--CT-TSCEEEEETTSCEEEESEEEECSCEEES
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEE--cC-CCEEEEEECCCcEEEcCEEEEccCCCcC
Confidence 56778888999999999999999999987 52 2357788888878999999999998654
No 139
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.97 E-value=3.1e-09 Score=102.86 Aligned_cols=60 Identities=13% Similarity=0.154 Sum_probs=48.1
Q ss_pred hHHHHHHHHHHHHHCCCEEEcCceEEEEEEecccC-CCeEEEEcCCCcEEEcCEEEEcCCCCh
Q 015088 152 PTKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAV-KGGVTVVTSNGEKFWGKKCVVTAGAWV 213 (413)
Q Consensus 152 ~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~-~~~~~v~~~~g~~i~ad~VV~A~G~~s 213 (413)
...+...+.+.+.+.|++++.+++|+++.. +.. ++.+.|.+.+|+++++|+||+|+|.+.
T Consensus 266 ~~~l~~~l~~~~~~~gv~v~~~~~v~~i~~--~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~ 326 (521)
T 1hyu_A 266 GQKLAGALKAHVSDYDVDVIDSQSASKLVP--AATEGGLHQIETASGAVLKARSIIIATGAKW 326 (521)
T ss_dssp HHHHHHHHHHHHHTSCEEEECSCCEEEEEC--CSSTTSCEEEEETTSCEEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHHHHHcCCEEEcCCEEEEEEe--ccCCCceEEEEECCCCEEEcCEEEECCCCCc
Confidence 345667777888888999999999999975 421 246888888888899999999999854
No 140
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.97 E-value=7.2e-09 Score=99.98 Aligned_cols=57 Identities=11% Similarity=0.070 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCCh
Q 015088 153 TKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWV 213 (413)
Q Consensus 153 ~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s 213 (413)
..+...+.+.+++.|+++++++.|.++.. . ++.+.+.+.++.++.+|.|++|+|-..
T Consensus 263 ~ei~~~l~~~l~~~gi~~~~~~~v~~~~~--~--~~~~~v~~~~~~~~~~D~vLvAvGR~P 319 (542)
T 4b1b_A 263 QQCAVKVKLYMEEQGVMFKNGILPKKLTK--M--DDKILVEFSDKTSELYDTVLYAIGRKG 319 (542)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEE--E--TTEEEEEETTSCEEEESEEEECSCEEE
T ss_pred hhHHHHHHHHHHhhcceeecceEEEEEEe--c--CCeEEEEEcCCCeEEEEEEEEcccccC
Confidence 56788889999999999999999999988 6 567888888888899999999999643
No 141
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=98.96 E-value=9e-09 Score=100.04 Aligned_cols=35 Identities=26% Similarity=0.458 Sum_probs=32.6
Q ss_pred CcccEEEECCCHHHHHHHHHHHHc-CCcEEEEcccC
Q 015088 6 EKFDVIVVGAGIMGSSAAYQLAKR-GQKTLLLEQFD 40 (413)
Q Consensus 6 ~~~dvvIIGaG~aG~~~A~~L~~~-g~~V~liE~~~ 40 (413)
..||+||||||.||+++|.+|++. +.+|+|||++.
T Consensus 18 ~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 469999999999999999999985 88999999987
No 142
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.96 E-value=6.8e-09 Score=103.96 Aligned_cols=41 Identities=39% Similarity=0.377 Sum_probs=36.7
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCC
Q 015088 5 GEKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHR 45 (413)
Q Consensus 5 ~~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~gg~ 45 (413)
..++||+|||||++|+++|+.|+++|++|+|||++...||.
T Consensus 389 ~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~ 429 (690)
T 3k30_A 389 ESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGR 429 (690)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTH
T ss_pred cccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCE
Confidence 34689999999999999999999999999999998876543
No 143
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.96 E-value=6e-09 Score=99.94 Aligned_cols=59 Identities=15% Similarity=-0.078 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcCC-------CcEEEcCEEEEcCCCCh
Q 015088 153 TKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSN-------GEKFWGKKCVVTAGAWV 213 (413)
Q Consensus 153 ~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~-------g~~i~ad~VV~A~G~~s 213 (413)
..+.+.+.+.+++.|++++++++|+++.. .+++..+.+.+.+ |+++.+|.||+|+|...
T Consensus 228 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~--~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p 293 (478)
T 3dk9_A 228 SMISTNCTEELENAGVEVLKFSQVKEVKK--TLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVP 293 (478)
T ss_dssp HHHHHHHHHHHHHTTCEEETTEEEEEEEE--CSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEE--cCCCcEEEEEEccCCCCcccceEEEcCEEEEeecccc
Confidence 56778888889999999999999999987 5322135666554 25689999999999754
No 144
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.96 E-value=1.2e-08 Score=97.34 Aligned_cols=59 Identities=20% Similarity=0.243 Sum_probs=47.3
Q ss_pred hHHHHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcC-C--Cc--EEEcCEEEEcCCCChH
Q 015088 152 PTKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTS-N--GE--KFWGKKCVVTAGAWVG 214 (413)
Q Consensus 152 ~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~-~--g~--~i~ad~VV~A~G~~s~ 214 (413)
...+.+.+.+.+++.|++++++++|+++.. + ++.+.+.+. + |+ ++.+|.||+|+|...+
T Consensus 209 ~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~--~--~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~~p~ 272 (464)
T 2eq6_A 209 DPETAALLRRALEKEGIRVRTKTKAVGYEK--K--KDGLHVRLEPAEGGEGEEVVVDKVLVAVGRKPR 272 (464)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSEEEEEEEE--E--TTEEEEEEEETTCCSCEEEEESEEEECSCEEES
T ss_pred CHHHHHHHHHHHHhcCCEEEcCCEEEEEEE--e--CCEEEEEEeecCCCceeEEEcCEEEECCCcccC
Confidence 356778888889999999999999999987 6 345666654 5 65 7999999999997553
No 145
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.95 E-value=7.9e-09 Score=98.89 Aligned_cols=40 Identities=33% Similarity=0.390 Sum_probs=36.0
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCC
Q 015088 5 GEKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHH 44 (413)
Q Consensus 5 ~~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~gg 44 (413)
+.++||+|||||++|+++|..|+++|++|+|||+++..||
T Consensus 4 ~~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG 43 (470)
T 1dxl_A 4 SDENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGG 43 (470)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCC
T ss_pred CccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccc
Confidence 3568999999999999999999999999999999866644
No 146
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=98.95 E-value=6.8e-09 Score=100.85 Aligned_cols=37 Identities=32% Similarity=0.393 Sum_probs=34.1
Q ss_pred CcccEEEECCCHHHHHHHHHHHHc-CCcEEEEcccCCC
Q 015088 6 EKFDVIVVGAGIMGSSAAYQLAKR-GQKTLLLEQFDFL 42 (413)
Q Consensus 6 ~~~dvvIIGaG~aG~~~A~~L~~~-g~~V~liE~~~~~ 42 (413)
..+|+||||+|.+|+++|++|++. |.+|+|||++...
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~ 49 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDD 49 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcC
Confidence 569999999999999999999998 8999999998654
No 147
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.94 E-value=7.9e-09 Score=98.98 Aligned_cols=60 Identities=20% Similarity=0.155 Sum_probs=47.2
Q ss_pred hHHHHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEE-----cCCCcEEEcCEEEEcCCCChH
Q 015088 152 PTKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVV-----TSNGEKFWGKKCVVTAGAWVG 214 (413)
Q Consensus 152 ~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~-----~~~g~~i~ad~VV~A~G~~s~ 214 (413)
+..+.+.+.+.+++.|++++++++|+++.. +++ ..+.+. +.+++++++|.||+|+|...+
T Consensus 219 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~--~~~-~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~p~ 283 (474)
T 1zmd_A 219 DMEISKNFQRILQKQGFKFKLNTKVTGATK--KSD-GKIDVSIEAASGGKAEVITCDVLLVCIGRRPF 283 (474)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSEEEEEEEE--CTT-SCEEEEEEETTSCCCEEEEESEEEECSCEEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEeCceEEEEEE--cCC-ceEEEEEEecCCCCceEEEcCEEEECcCCCcC
Confidence 456778888999999999999999999987 622 225555 356667999999999997654
No 148
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.93 E-value=1.4e-08 Score=98.31 Aligned_cols=36 Identities=31% Similarity=0.551 Sum_probs=33.3
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015088 5 GEKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 5 ~~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
..++||+|||||++|+++|..|++.|++|+|||+.+
T Consensus 30 ~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~ 65 (519)
T 3qfa_A 30 SYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVT 65 (519)
T ss_dssp SCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccC
Confidence 346999999999999999999999999999999964
No 149
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.93 E-value=3.1e-09 Score=96.00 Aligned_cols=56 Identities=13% Similarity=0.131 Sum_probs=42.1
Q ss_pred ChHHHHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEE--EEcCCCcEEEcCEEEEcCCCC
Q 015088 151 KPTKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVT--VVTSNGEKFWGKKCVVTAGAW 212 (413)
Q Consensus 151 ~~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~--v~~~~g~~i~ad~VV~A~G~~ 212 (413)
.+..+...+.+.+++.|++++++ +|.++ . ++..+.+. +.+.+ ++.+|+||+|+|..
T Consensus 60 ~~~~~~~~~~~~~~~~~v~~~~~-~v~~i-~--~~~~~~~~v~~~~~~--~~~~d~lvlAtG~~ 117 (315)
T 3r9u_A 60 DGISFMAPWSEQCMRFGLKHEMV-GVEQI-L--KNSDGSFTIKLEGGK--TELAKAVIVCTGSA 117 (315)
T ss_dssp CHHHHHHHHHHHHTTTCCEEECC-CEEEE-E--ECTTSCEEEEETTSC--EEEEEEEEECCCEE
T ss_pred CHHHHHHHHHHHHHHcCcEEEEE-EEEEE-e--cCCCCcEEEEEecCC--EEEeCEEEEeeCCC
Confidence 34567777888888889999987 89999 7 62115677 44444 69999999999973
No 150
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=98.93 E-value=2e-08 Score=96.91 Aligned_cols=46 Identities=35% Similarity=0.437 Sum_probs=40.4
Q ss_pred CCCcccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCccc
Q 015088 4 PGEKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSH 49 (413)
Q Consensus 4 ~~~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~gg~~~s~ 49 (413)
+...+||+|||||++|+++|+.|+++|++|+|+|+++..||...+.
T Consensus 30 ~~~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~~~~ 75 (498)
T 2iid_A 30 TSNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVRTY 75 (498)
T ss_dssp CSSCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTCCEE
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCceeee
Confidence 3446899999999999999999999999999999999888765543
No 151
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.92 E-value=5.1e-09 Score=100.68 Aligned_cols=59 Identities=14% Similarity=0.091 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCChH
Q 015088 153 TKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWVG 214 (413)
Q Consensus 153 ~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s~ 214 (413)
..+.+.+.+.+++.|++++++++|.++.. ++ ++.+.|.+.+|+++++|.||+|+|...+
T Consensus 235 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~--~~-~~~~~v~~~~G~~i~~D~vv~a~G~~p~ 293 (495)
T 2wpf_A 235 ETIREEVTKQLTANGIEIMTNENPAKVSL--NT-DGSKHVTFESGKTLDVDVVMMAIGRIPR 293 (495)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEE--CT-TSCEEEEETTSCEEEESEEEECSCEEEC
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEE--cC-CceEEEEECCCcEEEcCEEEECCCCccc
Confidence 46778888889999999999999999987 52 2357788888888999999999997553
No 152
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.92 E-value=1.6e-08 Score=94.97 Aligned_cols=69 Identities=17% Similarity=0.210 Sum_probs=55.9
Q ss_pred hHHHHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCChH-HhhhhhcCCcc
Q 015088 152 PTKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWVG-KLVKRITGLEL 225 (413)
Q Consensus 152 ~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s~-~l~~~~~g~~~ 225 (413)
+..+.+.+.+.+++.|++++++++|.++.. + +....|.+.+|+++.+|.||+|+|...+ .++..+ |+.+
T Consensus 184 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~--~--~~~~~v~~~dg~~i~aD~Vv~a~G~~p~~~l~~~~-gl~~ 253 (410)
T 3ef6_A 184 GRRIGAWLRGLLTELGVQVELGTGVVGFSG--E--GQLEQVMASDGRSFVADSALICVGAEPADQLARQA-GLAC 253 (410)
T ss_dssp CHHHHHHHHHHHHHHTCEEECSCCEEEEEC--S--SSCCEEEETTSCEEECSEEEECSCEEECCHHHHHT-TCCB
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCEEEEEec--c--CcEEEEEECCCCEEEcCEEEEeeCCeecHHHHHhC-CCcc
Confidence 356778888889999999999999999977 5 3556788888988999999999998765 566655 6544
No 153
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.90 E-value=1.1e-08 Score=98.25 Aligned_cols=35 Identities=29% Similarity=0.500 Sum_probs=32.7
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHcCCcEEEEccc
Q 015088 5 GEKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 5 ~~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~ 39 (413)
+.++||+|||||++|+++|..|+++|++|+|||+.
T Consensus 4 ~~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~ 38 (488)
T 3dgz_A 4 QQSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYV 38 (488)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEec
Confidence 45799999999999999999999999999999984
No 154
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=98.90 E-value=8.2e-09 Score=98.84 Aligned_cols=44 Identities=41% Similarity=0.471 Sum_probs=38.4
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCC-cEEEEcccCCCCCCCccc
Q 015088 6 EKFDVIVVGAGIMGSSAAYQLAKRGQ-KTLLLEQFDFLHHRGSSH 49 (413)
Q Consensus 6 ~~~dvvIIGaG~aG~~~A~~L~~~g~-~V~liE~~~~~gg~~~s~ 49 (413)
..+||+|||||++|+++|+.|+++|+ +|+|+|++...||+..+.
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~~~~ 47 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRMHKT 47 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTSCEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCceeec
Confidence 46899999999999999999999999 899999998888775553
No 155
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.89 E-value=1.6e-08 Score=97.24 Aligned_cols=56 Identities=9% Similarity=0.040 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcC--CC--cEEEcCEEEEcCCCCh
Q 015088 153 TKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTS--NG--EKFWGKKCVVTAGAWV 213 (413)
Q Consensus 153 ~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~--~g--~~i~ad~VV~A~G~~s 213 (413)
..+.+.+.+.+++. ++++++++|+++.. + ++.+.+.+. +| +++.+|.||+|+|...
T Consensus 215 ~~~~~~l~~~l~~~-V~i~~~~~v~~i~~--~--~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~~p 274 (492)
T 3ic9_A 215 EEMKRYAEKTFNEE-FYFDAKARVISTIE--K--EDAVEVIYFDKSGQKTTESFQYVLAATGRKA 274 (492)
T ss_dssp HHHHHHHHHHHHTT-SEEETTCEEEEEEE--C--SSSEEEEEECTTCCEEEEEESEEEECSCCEE
T ss_pred HHHHHHHHHHHhhC-cEEEECCEEEEEEE--c--CCEEEEEEEeCCCceEEEECCEEEEeeCCcc
Confidence 56777888888877 99999999999987 6 344556543 66 5799999999999754
No 156
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.89 E-value=1.2e-09 Score=105.01 Aligned_cols=67 Identities=13% Similarity=0.064 Sum_probs=50.5
Q ss_pred HHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCChH-HhhhhhcCCccceeEEEEE
Q 015088 161 TLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWVG-KLVKRITGLELPIQAVETT 233 (413)
Q Consensus 161 ~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s~-~l~~~~~g~~~~~~~~~g~ 233 (413)
+.+++.|+++++++.|+++.. + +....+.+.+|+++.+|.||+|+|.+.+ .+++.+ |..+.+.+ +|.
T Consensus 265 ~~l~~~GV~v~~~~~v~~i~~--~--~~v~~v~~~~g~~i~aD~Vv~a~G~~p~~~l~~~~-g~~~~~~~-~g~ 332 (493)
T 1y56_A 265 QELERWGIDYVHIPNVKRVEG--N--EKVERVIDMNNHEYKVDALIFADGRRPDINPITQA-GGKLRFRR-GYY 332 (493)
T ss_dssp HHHHHHTCEEEECSSEEEEEC--S--SSCCEEEETTCCEEECSEEEECCCEEECCHHHHHT-TCCEEEET-TEE
T ss_pred HHHHhCCcEEEeCCeeEEEec--C--CceEEEEeCCCeEEEeCEEEECCCcCcCchHHHhc-CCCccccC-Cce
Confidence 667778999999999999977 5 3455566778888999999999998765 477665 66544333 443
No 157
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.88 E-value=1.4e-08 Score=96.99 Aligned_cols=33 Identities=39% Similarity=0.531 Sum_probs=32.0
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEEccc
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~ 39 (413)
++||+|||||++|+++|..|+++|++|+|||++
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~ 35 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK 35 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 589999999999999999999999999999997
No 158
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.88 E-value=1.5e-09 Score=96.47 Aligned_cols=41 Identities=32% Similarity=0.393 Sum_probs=37.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCcc
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSS 48 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~gg~~~s 48 (413)
+||+|||||++|+++|+.|+++|++|+||||++.+||+..+
T Consensus 3 ~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~~~~ 43 (336)
T 3kkj_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSS 43 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccc
Confidence 79999999999999999999999999999999888766544
No 159
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.87 E-value=1.3e-08 Score=100.10 Aligned_cols=64 Identities=14% Similarity=0.110 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCChH-HhhhhhcCC
Q 015088 153 TKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWVG-KLVKRITGL 223 (413)
Q Consensus 153 ~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s~-~l~~~~~g~ 223 (413)
..+.+.+.+.+++.|++++++++|.++.. + ++ .|.+.+|+++.+|.||+|+|...+ .++..+ |+
T Consensus 228 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~--~--~~--~v~~~~g~~i~~D~Vi~a~G~~p~~~~l~~~-g~ 292 (588)
T 3ics_A 228 YEMAAYVHEHMKNHDVELVFEDGVDALEE--N--GA--VVRLKSGSVIQTDMLILAIGVQPESSLAKGA-GL 292 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEG--G--GT--EEEETTSCEEECSEEEECSCEEECCHHHHHT-TC
T ss_pred HHHHHHHHHHHHHcCCEEEECCeEEEEec--C--CC--EEEECCCCEEEcCEEEEccCCCCChHHHHhc-Cc
Confidence 57788888999999999999999999977 5 23 355677888999999999998654 455544 44
No 160
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.87 E-value=1.4e-08 Score=96.74 Aligned_cols=33 Identities=39% Similarity=0.469 Sum_probs=32.0
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEEccc
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~ 39 (413)
++||+|||||++|+++|..|++.|++|+|||+.
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~ 35 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG 35 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 589999999999999999999999999999997
No 161
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.87 E-value=2.4e-08 Score=96.20 Aligned_cols=59 Identities=12% Similarity=0.080 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcCCCcE-EEcCEEEEcCCCChH
Q 015088 153 TKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEK-FWGKKCVVTAGAWVG 214 (413)
Q Consensus 153 ~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~-i~ad~VV~A~G~~s~ 214 (413)
..+...+.+.+++.|++++++++|+++.. +++ +.+.+.+.+|++ +.+|.||+|+|...+
T Consensus 217 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~--~~~-~~~~v~~~~g~~~~~~D~vi~a~G~~p~ 276 (500)
T 1onf_A 217 ESVINVLENDMKKNNINIVTFADVVEIKK--VSD-KNLSIHLSDGRIYEHFDHVIYCVGRSPD 276 (500)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEE--SST-TCEEEEETTSCEEEEESEEEECCCBCCT
T ss_pred hhhHHHHHHHHHhCCCEEEECCEEEEEEE--cCC-ceEEEEECCCcEEEECCEEEECCCCCcC
Confidence 56778888899999999999999999987 522 347778888887 999999999997654
No 162
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.85 E-value=4.8e-08 Score=93.72 Aligned_cols=35 Identities=26% Similarity=0.452 Sum_probs=32.4
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHcCCcEEEEccc
Q 015088 5 GEKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 5 ~~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~ 39 (413)
+.++||+|||||++|+++|++|+++|++|+|||+.
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~ 41 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVLNGARVACLDFV 41 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEec
Confidence 35799999999999999999999999999999964
No 163
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.82 E-value=8.4e-09 Score=99.16 Aligned_cols=36 Identities=17% Similarity=0.282 Sum_probs=33.0
Q ss_pred cccEEEECCCHHHHHHHHHHHHcC---CcEEEEcccCCC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRG---QKTLLLEQFDFL 42 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g---~~V~liE~~~~~ 42 (413)
++||+|||||++|+++|..|+++| .+|+|||++...
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~ 73 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNI 73 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCC
Confidence 489999999999999999999988 999999997643
No 164
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.81 E-value=8e-08 Score=94.15 Aligned_cols=68 Identities=21% Similarity=0.277 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHHCCCEEEcCceEEEEEEeccc-----------------CCCeEEEEcCCCcEEEcCEEEEcCCCChH-
Q 015088 153 TKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDA-----------------VKGGVTVVTSNGEKFWGKKCVVTAGAWVG- 214 (413)
Q Consensus 153 ~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~-----------------~~~~~~v~~~~g~~i~ad~VV~A~G~~s~- 214 (413)
..+...+.+.+++.|++++++++|.++.. +. .++.+.+.+.+|+++.+|.||+|+|...+
T Consensus 192 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~ 269 (565)
T 3ntd_A 192 REMAGFAHQAIRDQGVDLRLGTALSEVSY--QVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIMAIGVRPET 269 (565)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEE--ECCCCCCCGGGTCCCTTCCTTCEEEEEETTSCEEEESEEEECSCEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEeCCeEEEEec--cccccccccccccccccccCCCcEEEEEcCCCEEEcCEEEECcCCccch
Confidence 56778888889999999999999999976 31 13456677788888999999999998664
Q ss_pred HhhhhhcCC
Q 015088 215 KLVKRITGL 223 (413)
Q Consensus 215 ~l~~~~~g~ 223 (413)
.++..+ |+
T Consensus 270 ~l~~~~-g~ 277 (565)
T 3ntd_A 270 QLARDA-GL 277 (565)
T ss_dssp HHHHHH-TC
T ss_pred HHHHhC-Cc
Confidence 455544 44
No 165
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.81 E-value=1.2e-08 Score=94.81 Aligned_cols=37 Identities=22% Similarity=0.364 Sum_probs=33.4
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCC
Q 015088 6 EKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFL 42 (413)
Q Consensus 6 ~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~ 42 (413)
++.+|+|||||++|+++|..|...+.+|+|||+++..
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~ 44 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYL 44 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSC
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCC
Confidence 5689999999999999999997778999999998654
No 166
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=98.80 E-value=4.5e-09 Score=102.23 Aligned_cols=37 Identities=32% Similarity=0.478 Sum_probs=33.8
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHcC-CcEEEEcccCC
Q 015088 5 GEKFDVIVVGAGIMGSSAAYQLAKRG-QKTLLLEQFDF 41 (413)
Q Consensus 5 ~~~~dvvIIGaG~aG~~~A~~L~~~g-~~V~liE~~~~ 41 (413)
...||+||||||.||+++|.+|++.| .+|+|||++..
T Consensus 4 ~~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 4 GSHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp TCEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CCcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 45799999999999999999999997 69999999865
No 167
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.80 E-value=1.6e-08 Score=96.19 Aligned_cols=36 Identities=22% Similarity=0.387 Sum_probs=32.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHc--CCcEEEEcccCCC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKR--GQKTLLLEQFDFL 42 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~--g~~V~liE~~~~~ 42 (413)
++||+|||||++|+++|+.|++. |++|+|||+++..
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~ 40 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWV 40 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCC
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCcc
Confidence 47999999999999999999998 8899999998654
No 168
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.80 E-value=3e-08 Score=93.11 Aligned_cols=59 Identities=12% Similarity=0.142 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCChHHhhhh
Q 015088 153 TKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWVGKLVKR 219 (413)
Q Consensus 153 ~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s~~l~~~ 219 (413)
..+.+.+.+.+++.|++++++++|++++. + . +.+.+|+++++|.||+|+|...+.++..
T Consensus 218 ~~~~~~~~~~l~~~gV~~~~~~~v~~i~~--~----~--v~~~~g~~~~~D~vi~a~G~~~~~~l~~ 276 (409)
T 3h8l_A 218 PNSRKAVASIYNQLGIKLVHNFKIKEIRE--H----E--IVDEKGNTIPADITILLPPYTGNPALKN 276 (409)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEECS--S----E--EEETTSCEEECSEEEEECCEECCHHHHT
T ss_pred HHHHHHHHHHHHHCCCEEEcCCceEEECC--C----e--EEECCCCEEeeeEEEECCCCCccHHHHh
Confidence 57788888999999999999999999865 4 2 5667888899999999999877666554
No 169
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.79 E-value=1.1e-08 Score=97.21 Aligned_cols=35 Identities=23% Similarity=0.417 Sum_probs=32.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHc--CCcEEEEcccCCC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKR--GQKTLLLEQFDFL 42 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~--g~~V~liE~~~~~ 42 (413)
+||+|||||++|+++|++|+++ |++|+|||++...
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~ 39 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATV 39 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCC
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCC
Confidence 5899999999999999999998 8999999998765
No 170
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.79 E-value=6e-08 Score=90.90 Aligned_cols=65 Identities=20% Similarity=0.289 Sum_probs=51.5
Q ss_pred hHHHHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCChH-HhhhhhcCCcc
Q 015088 152 PTKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWVG-KLVKRITGLEL 225 (413)
Q Consensus 152 ~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s~-~l~~~~~g~~~ 225 (413)
+..+.+.+.+.+++.|++++++++|+++.. + .|.+.+|+++.+|.||+|+|...+ .++..+ ++.+
T Consensus 186 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~-----~---~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~-gl~~ 251 (408)
T 2gqw_A 186 PATLADFVARYHAAQGVDLRFERSVTGSVD-----G---VVLLDDGTRIAADMVVVGIGVLANDALARAA-GLAC 251 (408)
T ss_dssp CHHHHHHHHHHHHHTTCEEEESCCEEEEET-----T---EEEETTSCEEECSEEEECSCEEECCHHHHHH-TCCB
T ss_pred CHHHHHHHHHHHHHcCcEEEeCCEEEEEEC-----C---EEEECCCCEEEcCEEEECcCCCccHHHHHhC-CCCC
Confidence 457788888999999999999999998843 2 566678888999999999998654 566665 5543
No 171
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.76 E-value=1.7e-08 Score=95.64 Aligned_cols=34 Identities=32% Similarity=0.594 Sum_probs=31.7
Q ss_pred cccEEEECCCHHHHHHHHHHHH---cCCcEEEEcccC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAK---RGQKTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~---~g~~V~liE~~~ 40 (413)
+.||+|||||++|+++|+.|++ .|++|+|||+++
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~ 40 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISAND 40 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSS
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCC
Confidence 4689999999999999999999 899999999975
No 172
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.73 E-value=3.2e-08 Score=93.42 Aligned_cols=35 Identities=26% Similarity=0.460 Sum_probs=32.2
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCC--cEEEEcccCC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQ--KTLLLEQFDF 41 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~--~V~liE~~~~ 41 (413)
.+||+|||||++|+++|..|+++|+ +|+|||+...
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~ 40 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATV 40 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCS
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCC
Confidence 5899999999999999999999998 7999998753
No 173
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.72 E-value=3.4e-08 Score=93.84 Aligned_cols=35 Identities=29% Similarity=0.359 Sum_probs=32.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHc--CCcEEEEcccCCC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKR--GQKTLLLEQFDFL 42 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~--g~~V~liE~~~~~ 42 (413)
+||+|||||++|+++|..|++. |++|+|||++...
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~ 37 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFI 37 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCcc
Confidence 3899999999999999999998 9999999998654
No 174
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.70 E-value=4.4e-08 Score=93.20 Aligned_cols=35 Identities=29% Similarity=0.257 Sum_probs=32.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHc--CCcEEEEcccCCC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKR--GQKTLLLEQFDFL 42 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~--g~~V~liE~~~~~ 42 (413)
+||+|||||++|+++|..|+++ |++|+|||++...
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~ 37 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNI 37 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCC
Confidence 4899999999999999999998 9999999998643
No 175
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.70 E-value=1.1e-08 Score=95.50 Aligned_cols=50 Identities=28% Similarity=0.461 Sum_probs=42.3
Q ss_pred CCCCCCcccEEEECCCHHHHHHHHHHHHc-CCcEEEEcccCCCCCCCcccC
Q 015088 1 MEFPGEKFDVIVVGAGIMGSSAAYQLAKR-GQKTLLLEQFDFLHHRGSSHG 50 (413)
Q Consensus 1 m~~~~~~~dvvIIGaG~aG~~~A~~L~~~-g~~V~liE~~~~~gg~~~s~~ 50 (413)
|..|+.++||+|||||++|+++|++|+++ |++|+|+|+++..||...+..
T Consensus 1 m~~m~~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~~~~ 51 (399)
T 1v0j_A 1 MQPMTARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYSEA 51 (399)
T ss_dssp ---CCCSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGCEEE
T ss_pred CCcccccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeecc
Confidence 55555679999999999999999999999 999999999999988776654
No 176
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.70 E-value=5.3e-08 Score=93.33 Aligned_cols=36 Identities=22% Similarity=0.441 Sum_probs=32.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHc--CCcEEEEcccCCC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKR--GQKTLLLEQFDFL 42 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~--g~~V~liE~~~~~ 42 (413)
++||+|||||++|+++|..|++. |.+|+|||+....
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~ 73 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIY 73 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCC
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCC
Confidence 36999999999999999999996 8999999997654
No 177
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.69 E-value=4.6e-07 Score=85.45 Aligned_cols=62 Identities=15% Similarity=0.061 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcCCC--cEEEcCEEEEcCCCChHHhhhhh
Q 015088 153 TKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNG--EKFWGKKCVVTAGAWVGKLVKRI 220 (413)
Q Consensus 153 ~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g--~~i~ad~VV~A~G~~s~~l~~~~ 220 (413)
....+.+.+.++++|+++++++.|++++. +.+.+...+| +++.+|.+|+|+|...+.++...
T Consensus 200 ~~~~~~l~~~l~~~GV~~~~~~~v~~v~~------~~~~~~~~~g~~~~i~~d~vi~~~G~~~~~~~~~~ 263 (430)
T 3hyw_A 200 GASKRLVEDLFAERNIDWIANVAVKAIEP------DKVIYEDLNGNTHEVPAKFTMFMPSFQGPEVVASA 263 (430)
T ss_dssp TTHHHHHHHHHHHTTCEEECSCEEEEECS------SEEEEECTTSCEEEEECSEEEEECEEECCHHHHTT
T ss_pred HHHHHHHHHHHHhCCeEEEeCceEEEEeC------CceEEEeeCCCceEeecceEEEeccCCCchHHHhc
Confidence 34566778888899999999999999855 3455665554 47999999999998766666554
No 178
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=98.68 E-value=3.4e-08 Score=95.86 Aligned_cols=36 Identities=36% Similarity=0.402 Sum_probs=33.0
Q ss_pred cccEEEECCCHHHHHHHHHHHH-cCCcEEEEcccCCC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAK-RGQKTLLLEQFDFL 42 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~-~g~~V~liE~~~~~ 42 (413)
.||+||||||.+|+.+|.+|++ .+.+|+|||++...
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 4899999999999999999999 69999999998644
No 179
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.67 E-value=1.8e-07 Score=89.11 Aligned_cols=35 Identities=26% Similarity=0.352 Sum_probs=32.6
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015088 6 EKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 6 ~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
.++||+|||||++|+++|.+|++.|++|+|||+..
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~ 38 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQA 38 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEccCC
Confidence 46899999999999999999999999999999943
No 180
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=98.67 E-value=2.6e-07 Score=90.00 Aligned_cols=37 Identities=43% Similarity=0.543 Sum_probs=33.8
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCC
Q 015088 5 GEKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDF 41 (413)
Q Consensus 5 ~~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~ 41 (413)
+..+|+||||+|++|+++|++|++.|++|+|||++..
T Consensus 5 ~~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~ 41 (546)
T 1kdg_A 5 ATPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGP 41 (546)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CCceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 3569999999999999999999999999999999864
No 181
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=98.67 E-value=9.6e-08 Score=92.74 Aligned_cols=36 Identities=31% Similarity=0.478 Sum_probs=32.5
Q ss_pred CcccEEEECCCHHHHHHHHHHHH-cCCcEEEEcccCC
Q 015088 6 EKFDVIVVGAGIMGSSAAYQLAK-RGQKTLLLEQFDF 41 (413)
Q Consensus 6 ~~~dvvIIGaG~aG~~~A~~L~~-~g~~V~liE~~~~ 41 (413)
.+||+||||||.+|+.+|.+|++ .|++|+|||++..
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEE 52 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBC
T ss_pred CCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCC
Confidence 46999999999999999999998 6789999999854
No 182
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=98.65 E-value=1e-07 Score=92.40 Aligned_cols=35 Identities=31% Similarity=0.518 Sum_probs=32.7
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCC
Q 015088 6 EKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDF 41 (413)
Q Consensus 6 ~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~ 41 (413)
..||+||||||.+|+.+|.+|++ |.+|+|||++..
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~ 59 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSL 59 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBC
T ss_pred CcccEEEECccHHHHHHHHHHhc-CCcEEEEecCCC
Confidence 46899999999999999999999 999999999864
No 183
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.65 E-value=1.1e-08 Score=94.50 Aligned_cols=35 Identities=23% Similarity=0.254 Sum_probs=31.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFL 42 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~ 42 (413)
-.||+|||||++|+++|..|+++| +|+|||++...
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~ 42 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVP 42 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSC
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCC
Confidence 369999999999999999999999 99999997653
No 184
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=98.58 E-value=2.3e-06 Score=85.33 Aligned_cols=40 Identities=30% Similarity=0.414 Sum_probs=36.0
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCC
Q 015088 6 EKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHR 45 (413)
Q Consensus 6 ~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~gg~ 45 (413)
..+||+|||||++|+++|..|+++|++|+|||+++..|+.
T Consensus 372 ~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~ 411 (671)
T 1ps9_A 372 QKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQ 411 (671)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTT
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCe
Confidence 4589999999999999999999999999999998776543
No 185
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.57 E-value=1.7e-08 Score=95.32 Aligned_cols=35 Identities=29% Similarity=0.525 Sum_probs=32.0
Q ss_pred ccEEEECCCHHHHHHHHHHHH--cCCcEEEEcccCCC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAK--RGQKTLLLEQFDFL 42 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~--~g~~V~liE~~~~~ 42 (413)
.||+|||||++|+++|++|++ .|++|+|||+++..
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~ 39 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYF 39 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEE
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCC
Confidence 589999999999999999999 78999999997543
No 186
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.56 E-value=4.9e-07 Score=89.11 Aligned_cols=34 Identities=38% Similarity=0.558 Sum_probs=32.0
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEEccc
Q 015088 6 EKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 6 ~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~ 39 (413)
.++||+|||||++|+++|.+|+++|++|+|||+.
T Consensus 106 ~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 106 YDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred ccccEEEECCCccHHHHHHHHHhCCCeEEEEecc
Confidence 4689999999999999999999999999999984
No 187
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=98.56 E-value=4e-07 Score=87.63 Aligned_cols=36 Identities=28% Similarity=0.433 Sum_probs=33.7
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCC
Q 015088 6 EKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDF 41 (413)
Q Consensus 6 ~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~ 41 (413)
.++|++|||+|++|+++|++|++.|++|+|||++..
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~ 39 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQL 39 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCC
Confidence 469999999999999999999999999999999864
No 188
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=98.53 E-value=2.7e-06 Score=85.54 Aligned_cols=40 Identities=33% Similarity=0.380 Sum_probs=36.3
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCC
Q 015088 6 EKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHR 45 (413)
Q Consensus 6 ~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~gg~ 45 (413)
..+||+|||||++|+++|+.|+++|++|+|||+.+..||.
T Consensus 388 ~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~ 427 (729)
T 1o94_A 388 NKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGH 427 (729)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTT
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCe
Confidence 4579999999999999999999999999999998877554
No 189
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.52 E-value=8.4e-08 Score=88.68 Aligned_cols=45 Identities=31% Similarity=0.514 Sum_probs=40.0
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCccc
Q 015088 5 GEKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSH 49 (413)
Q Consensus 5 ~~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~gg~~~s~ 49 (413)
...+||+|||||++|+++|++|+++|++|+|+|+++..||...+.
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~ 71 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAYDC 71 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGCCE
T ss_pred CCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCcccee
Confidence 346899999999999999999999999999999998887766544
No 190
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.51 E-value=3.7e-07 Score=85.34 Aligned_cols=59 Identities=19% Similarity=0.141 Sum_probs=46.1
Q ss_pred HHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCChHHhhhhh
Q 015088 158 MFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWVGKLVKRI 220 (413)
Q Consensus 158 ~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s~~l~~~~ 220 (413)
.+.+.+++.|+++++++++..++. + .....+.+.+|+++++|.||+|+|...+.++...
T Consensus 207 ~~~~~l~~~gi~v~~~~~v~~v~~--~--~~~~~v~~~~g~~i~~D~vi~~~g~~~~~~~~~~ 265 (401)
T 3vrd_B 207 LYGFGTENALIEWHPGPDAAVVKT--D--TEAMTVETSFGETFKAAVINLIPPQRAGKIAQSA 265 (401)
T ss_dssp HSCTTSTTCSEEEECTTTTCEEEE--E--TTTTEEEETTSCEEECSEEEECCCEEECHHHHHT
T ss_pred HHHHHHHhcCcEEEeCceEEEEEe--c--ccceEEEcCCCcEEEeeEEEEecCcCCchhHhhc
Confidence 333344667999999999999887 5 4556788889999999999999997666666654
No 191
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.51 E-value=1.6e-06 Score=81.76 Aligned_cols=68 Identities=15% Similarity=0.239 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHCCCEEEcCceEEEEEEecc-cCCCeEEEEcCCCcEEEcCEEEEcCCCChH-HhhhhhcCCcc
Q 015088 155 AVSMFQTLAIKNGAVLRDNMEVKTVLKVKD-AVKGGVTVVTSNGEKFWGKKCVVTAGAWVG-KLVKRITGLEL 225 (413)
Q Consensus 155 ~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~-~~~~~~~v~~~~g~~i~ad~VV~A~G~~s~-~l~~~~~g~~~ 225 (413)
+.+.+.+.+++.|++++++++|+++.. + +++....|.+.+|+++.+|.||+|+|...+ .++..+ ++.+
T Consensus 193 ~~~~l~~~l~~~GV~i~~~~~v~~i~~--~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~~p~~~l~~~~-gl~~ 262 (431)
T 1q1r_A 193 VSAFYEHLHREAGVDIRTGTQVCGFEM--STDQQKVTAVLCEDGTRLPADLVIAGIGLIPNCELASAA-GLQV 262 (431)
T ss_dssp HHHHHHHHHHHHTCEEECSCCEEEEEE--CTTTCCEEEEEETTSCEEECSEEEECCCEEECCHHHHHT-TCCB
T ss_pred HHHHHHHHHHhCCeEEEeCCEEEEEEe--ccCCCcEEEEEeCCCCEEEcCEEEECCCCCcCcchhhcc-CCCC
Confidence 344456667778999999999999865 3 223444778888888999999999997654 566655 5543
No 192
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.51 E-value=1e-07 Score=87.32 Aligned_cols=46 Identities=28% Similarity=0.395 Sum_probs=40.6
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHcCCcEEEEccc-CCCCCCCcccC
Q 015088 5 GEKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQF-DFLHHRGSSHG 50 (413)
Q Consensus 5 ~~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~-~~~gg~~~s~~ 50 (413)
...+||+|||||++|+++|++|+++|++|+|+|++ +..||+..+..
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~~t~~ 88 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIKTFH 88 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCCEEC
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCceeeec
Confidence 45689999999999999999999999999999999 88887765543
No 193
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.50 E-value=1.1e-07 Score=86.38 Aligned_cols=41 Identities=39% Similarity=0.389 Sum_probs=35.8
Q ss_pred CcccEEEECCCHHHHHHHHHHHH--cCCcEEEEcccCCCCCCC
Q 015088 6 EKFDVIVVGAGIMGSSAAYQLAK--RGQKTLLLEQFDFLHHRG 46 (413)
Q Consensus 6 ~~~dvvIIGaG~aG~~~A~~L~~--~g~~V~liE~~~~~gg~~ 46 (413)
..+||+|||||++|++||++|++ .|++|+|||++..+||..
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~ 106 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGS 106 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTT
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceE
Confidence 35899999999999999999986 499999999998776543
No 194
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=98.50 E-value=1.3e-06 Score=85.41 Aligned_cols=37 Identities=27% Similarity=0.472 Sum_probs=33.9
Q ss_pred CcccEEEECCCHHHHHHHHHHHH-cCCcEEEEcccCCC
Q 015088 6 EKFDVIVVGAGIMGSSAAYQLAK-RGQKTLLLEQFDFL 42 (413)
Q Consensus 6 ~~~dvvIIGaG~aG~~~A~~L~~-~g~~V~liE~~~~~ 42 (413)
..+|+||||+|.+|+++|.+|++ .|.+|+|||++...
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 46999999999999999999999 79999999998644
No 195
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=98.46 E-value=6.1e-07 Score=92.91 Aligned_cols=37 Identities=35% Similarity=0.500 Sum_probs=34.5
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLH 43 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~g 43 (413)
++||+|||||++|+++|..|+++|++|+|||++...|
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~G 164 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAG 164 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 5899999999999999999999999999999987664
No 196
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.44 E-value=1.5e-06 Score=83.29 Aligned_cols=57 Identities=18% Similarity=0.149 Sum_probs=41.5
Q ss_pred HHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcC-----CCcEEEcCEEEEcCCCChH
Q 015088 156 VSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTS-----NGEKFWGKKCVVTAGAWVG 214 (413)
Q Consensus 156 ~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~-----~g~~i~ad~VV~A~G~~s~ 214 (413)
.+.+.+.+++.|++++++++|+++.. .++++.+.+.+. +++++.+|.||+|+|...+
T Consensus 227 ~~~l~~~l~~~gv~i~~~~~v~~i~~--~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~ 288 (478)
T 1v59_A 227 AKATQKFLKKQGLDFKLSTKVISAKR--NDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRPY 288 (478)
T ss_dssp HHHHHHHHHHTTCEEECSEEEEEEEE--ETTTTEEEEEEEETTTTEEEEEEESEEEECSCEEEC
T ss_pred HHHHHHHHHHCCCEEEeCCEEEEEEE--ecCCCeEEEEEEEcCCCCceEEECCEEEECCCCCcC
Confidence 44456667788999999999999975 312345555543 3457999999999997653
No 197
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.41 E-value=2e-06 Score=81.72 Aligned_cols=55 Identities=20% Similarity=0.197 Sum_probs=41.1
Q ss_pred HHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcC---CCcEEEcCEEEEcCCCChH
Q 015088 156 VSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTS---NGEKFWGKKCVVTAGAWVG 214 (413)
Q Consensus 156 ~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~---~g~~i~ad~VV~A~G~~s~ 214 (413)
.+.+.+.+++.|++++++++|+++.. + ++.+.+.+. +++++++|.||+|+|...+
T Consensus 214 ~~~l~~~l~~~gv~i~~~~~v~~i~~--~--~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~ 271 (455)
T 1ebd_A 214 AAIIKKRLKKKGVEVVTNALAKGAEE--R--EDGVTVTYEANGETKTIDADYVLVTVGRRPN 271 (455)
T ss_dssp HHHHHHHHHHTTCEEEESEEEEEEEE--E--TTEEEEEEEETTEEEEEEESEEEECSCEEES
T ss_pred HHHHHHHHHHCCCEEEeCCEEEEEEE--e--CCeEEEEEEeCCceeEEEcCEEEECcCCCcc
Confidence 34455667788999999999999987 5 344555543 4457999999999997553
No 198
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.40 E-value=1.8e-06 Score=81.81 Aligned_cols=55 Identities=16% Similarity=0.107 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCChH
Q 015088 155 AVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWVG 214 (413)
Q Consensus 155 ~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s~ 214 (413)
+.+.+.+.+++.|++++++++|+++.. + +..+.+.+ +++++++|.||+|+|...+
T Consensus 193 ~~~~l~~~l~~~gv~i~~~~~v~~i~~--~--~~v~~v~~-~~~~i~~d~vi~a~G~~p~ 247 (447)
T 1nhp_A 193 FTDVLTEEMEANNITIATGETVERYEG--D--GRVQKVVT-DKNAYDADLVVVAVGVRPN 247 (447)
T ss_dssp HHHHHHHHHHTTTEEEEESCCEEEEEC--S--SBCCEEEE-SSCEEECSEEEECSCEEES
T ss_pred HHHHHHHHHHhCCCEEEcCCEEEEEEc--c--CcEEEEEE-CCCEEECCEEEECcCCCCC
Confidence 344556677788999999999999977 5 33334555 4456999999999997654
No 199
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=98.39 E-value=2.3e-07 Score=89.61 Aligned_cols=45 Identities=29% Similarity=0.325 Sum_probs=40.1
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCcccC
Q 015088 6 EKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHG 50 (413)
Q Consensus 6 ~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~gg~~~s~~ 50 (413)
..+||+|||||++|+++|++|+++|++|+|+|+++..||...+..
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~ 56 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVS 56 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceeeec
Confidence 358999999999999999999999999999999999988766543
No 200
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=98.39 E-value=1.9e-07 Score=86.14 Aligned_cols=43 Identities=28% Similarity=0.551 Sum_probs=38.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCcccC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHG 50 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~gg~~~s~~ 50 (413)
+||+|||||++|+++|++|+++|++|+|+|+++..||...+..
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~ 44 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNAYTED 44 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGGCEEE
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcceEeec
Confidence 6999999999999999999999999999999988887765543
No 201
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.38 E-value=4.5e-07 Score=87.17 Aligned_cols=57 Identities=19% Similarity=0.103 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHHCCCEEEcCceEEEEEEecccCC------CeEEEEcCCC-----cEEEcCEEEEcCCC
Q 015088 153 TKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVK------GGVTVVTSNG-----EKFWGKKCVVTAGA 211 (413)
Q Consensus 153 ~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~------~~~~v~~~~g-----~~i~ad~VV~A~G~ 211 (413)
..+...|...+++.+..++++++|+++.. .+.+ +.|.|++.++ +++.|++||+|+|.
T Consensus 145 ~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~--~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~ 212 (501)
T 4b63_A 145 LEFEDYMRWCAQQFSDVVAYGEEVVEVIP--GKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGG 212 (501)
T ss_dssp HHHHHHHHHHHHTTGGGEEESEEEEEEEE--ECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHHHcCCceEcceEEEeecc--ccccccccccceEEEEEecCCCceEEEEEeCEEEECcCC
Confidence 45666666666667778999999999987 4321 3588876543 26889999999995
No 202
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.36 E-value=1.9e-06 Score=82.50 Aligned_cols=55 Identities=20% Similarity=0.085 Sum_probs=41.9
Q ss_pred HHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcCC----CcEEEcCEEEEcCCCChH
Q 015088 156 VSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSN----GEKFWGKKCVVTAGAWVG 214 (413)
Q Consensus 156 ~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~----g~~i~ad~VV~A~G~~s~ 214 (413)
.+.+.+.+++.|++++++++|.++.. + ++.+.+.+.+ |+++.+|.||+|+|...+
T Consensus 229 ~~~l~~~l~~~gV~i~~~~~v~~i~~--~--~~~~~v~~~~~~~~g~~~~~D~vv~a~G~~p~ 287 (482)
T 1ojt_A 229 VKVWQKQNEYRFDNIMVNTKTVAVEP--K--EDGVYVTFEGANAPKEPQRYDAVLVAAGRAPN 287 (482)
T ss_dssp HHHHHHHHGGGEEEEECSCEEEEEEE--E--TTEEEEEEESSSCCSSCEEESCEEECCCEEEC
T ss_pred HHHHHHHHHhcCCEEEECCEEEEEEE--c--CCeEEEEEeccCCCceEEEcCEEEECcCCCcC
Confidence 34455666778999999999999987 6 3455666555 667899999999997653
No 203
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.36 E-value=2.7e-06 Score=81.42 Aligned_cols=60 Identities=17% Similarity=0.146 Sum_probs=44.0
Q ss_pred HHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCChH-Hhhhhh
Q 015088 156 VSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWVG-KLVKRI 220 (413)
Q Consensus 156 ~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s~-~l~~~~ 220 (413)
.+.+.+.+++.|++++++++|+++.. + +....+.+.++ ++++|.||+|+|...+ .++..+
T Consensus 230 ~~~l~~~l~~~Gv~i~~~~~v~~i~~--~--~~v~~v~~~~~-~i~~D~vi~a~G~~p~~~~l~~~ 290 (480)
T 3cgb_A 230 AEYIYKEADKHHIEILTNENVKAFKG--N--ERVEAVETDKG-TYKADLVLVSVGVKPNTDFLEGT 290 (480)
T ss_dssp HHHHHHHHHHTTCEEECSCCEEEEEE--S--SBEEEEEETTE-EEECSEEEECSCEEESCGGGTTS
T ss_pred HHHHHHHHHHcCcEEEcCCEEEEEEc--C--CcEEEEEECCC-EEEcCEEEECcCCCcChHHHHhC
Confidence 34456667788999999999999987 5 34445666544 6999999999998654 354443
No 204
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.33 E-value=5e-06 Score=79.77 Aligned_cols=61 Identities=18% Similarity=0.138 Sum_probs=47.9
Q ss_pred HHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCChH-Hhhhhh
Q 015088 156 VSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWVG-KLVKRI 220 (413)
Q Consensus 156 ~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s~-~l~~~~ 220 (413)
.+.+.+.+++.|++++++++|+++.. + ++.+.|.+.+|+++.+|.||+|+|...+ .++..+
T Consensus 229 ~~~~~~~l~~~GV~v~~~~~V~~i~~--~--~~~~~v~l~dG~~i~aD~Vv~a~G~~pn~~l~~~~ 290 (493)
T 1m6i_A 229 SNWTMEKVRREGVKVMPNAIVQSVGV--S--SGKLLIKLKDGRKVETDHIVAAVGLEPNVELAKTG 290 (493)
T ss_dssp HHHHHHHHHTTTCEEECSCCEEEEEE--E--TTEEEEEETTSCEEEESEEEECCCEEECCTTHHHH
T ss_pred HHHHHHHHHhcCCEEEeCCEEEEEEe--c--CCeEEEEECCCCEEECCEEEECCCCCccHHHHHHc
Confidence 34455667778999999999999987 5 3556788888988999999999998654 455554
No 205
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.33 E-value=5.2e-06 Score=79.08 Aligned_cols=54 Identities=17% Similarity=0.217 Sum_probs=40.6
Q ss_pred HHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcC-CC--cEEEcCEEEEcCCCChH
Q 015088 157 SMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTS-NG--EKFWGKKCVVTAGAWVG 214 (413)
Q Consensus 157 ~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~-~g--~~i~ad~VV~A~G~~s~ 214 (413)
+.+.+.+++.|++++++++|+++.. + ++.+.+.+. +| +++.+|.||+|+|...+
T Consensus 216 ~~l~~~l~~~gv~i~~~~~v~~i~~--~--~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~ 272 (464)
T 2a8x_A 216 KEIEKQFKKLGVTILTATKVESIAD--G--GSQVTVTVTKDGVAQELKAEKVLQAIGFAPN 272 (464)
T ss_dssp HHHHHHHHHHTCEEECSCEEEEEEE--C--SSCEEEEEESSSCEEEEEESEEEECSCEEEC
T ss_pred HHHHHHHHHcCCEEEeCcEEEEEEE--c--CCeEEEEEEcCCceEEEEcCEEEECCCCCcc
Confidence 3455566778999999999999987 6 334555543 55 57999999999997543
No 206
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.30 E-value=7e-06 Score=77.93 Aligned_cols=54 Identities=13% Similarity=0.088 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCCh
Q 015088 155 AVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWV 213 (413)
Q Consensus 155 ~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s 213 (413)
+.+.+.+.+++.|++++++++|+++.. . ++.+.|.++++ ++++|.||+|+|...
T Consensus 191 ~~~~l~~~l~~~GV~i~~~~~v~~i~~--~--~~~v~v~~~~g-~i~aD~Vv~A~G~~p 244 (452)
T 3oc4_A 191 MVAEVQKSLEKQAVIFHFEETVLGIEE--T--ANGIVLETSEQ-EISCDSGIFALNLHP 244 (452)
T ss_dssp HHHHHHHHHHTTTEEEEETCCEEEEEE--C--SSCEEEEESSC-EEEESEEEECSCCBC
T ss_pred HHHHHHHHHHHcCCEEEeCCEEEEEEc--c--CCeEEEEECCC-EEEeCEEEECcCCCC
Confidence 445566677788999999999999986 5 34557777777 699999999999754
No 207
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.28 E-value=9.1e-06 Score=77.13 Aligned_cols=55 Identities=11% Similarity=0.073 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeE-EEEcCCCcEEEcCEEEEcCCCChH
Q 015088 155 AVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGV-TVVTSNGEKFWGKKCVVTAGAWVG 214 (413)
Q Consensus 155 ~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~-~v~~~~g~~i~ad~VV~A~G~~s~ 214 (413)
+.+.+.+.+++.|++++++++|+++.. + ++.+ .+.+ +|+++++|.||+|+|...+
T Consensus 193 ~~~~l~~~l~~~Gv~i~~~~~v~~i~~--~--~~~v~~v~~-~g~~i~~D~vv~a~G~~p~ 248 (452)
T 2cdu_A 193 FTDILAKDYEAHGVNLVLGSKVAAFEE--V--DDEIITKTL-DGKEIKSDIAILCIGFRPN 248 (452)
T ss_dssp HHHHHHHHHHHTTCEEEESSCEEEEEE--E--TTEEEEEET-TSCEEEESEEEECCCEEEC
T ss_pred HHHHHHHHHHHCCCEEEcCCeeEEEEc--C--CCeEEEEEe-CCCEEECCEEEECcCCCCC
Confidence 344556677888999999999999987 5 3344 3555 6777999999999997543
No 208
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.28 E-value=4.1e-07 Score=87.30 Aligned_cols=35 Identities=14% Similarity=0.240 Sum_probs=32.1
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015088 6 EKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 6 ~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
.+.+|||||||.+|+++|..|.+.+++|+|||+++
T Consensus 41 ~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~ 75 (502)
T 4g6h_A 41 DKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRS 75 (502)
T ss_dssp SSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSS
T ss_pred CCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCC
Confidence 35689999999999999999999999999999864
No 209
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.28 E-value=3.5e-06 Score=77.62 Aligned_cols=58 Identities=22% Similarity=0.303 Sum_probs=42.9
Q ss_pred HHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCChH-HhhhhhcCCc
Q 015088 157 SMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWVG-KLVKRITGLE 224 (413)
Q Consensus 157 ~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s~-~l~~~~~g~~ 224 (413)
+.+.+.+++.|++++++++|+++.. + .+.+.+|+ +++|.||+|+|...+ .++..+ ++.
T Consensus 187 ~~l~~~l~~~gV~i~~~~~v~~i~~--~------~v~~~~g~-i~~D~vi~a~G~~p~~~ll~~~-gl~ 245 (367)
T 1xhc_A 187 NMIKDMLEETGVKFFLNSELLEANE--E------GVLTNSGF-IEGKVKICAIGIVPNVDLARRS-GIH 245 (367)
T ss_dssp HHHHHHHHHTTEEEECSCCEEEECS--S------EEEETTEE-EECSCEEEECCEEECCHHHHHT-TCC
T ss_pred HHHHHHHHHCCCEEEcCCEEEEEEe--e------EEEECCCE-EEcCEEEECcCCCcCHHHHHhC-CCC
Confidence 3455667778999999999998854 2 25567787 999999999997654 466554 543
No 210
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=98.28 E-value=5.4e-07 Score=83.55 Aligned_cols=43 Identities=26% Similarity=0.472 Sum_probs=38.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCccc
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSH 49 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~gg~~~s~ 49 (413)
++||+|||||++|+++|++|+++|++|+|+|+++..||...+.
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~ 45 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNSYDA 45 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGGCEE
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCccccc
Confidence 3799999999999999999999999999999999888766553
No 211
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.27 E-value=5.2e-06 Score=78.90 Aligned_cols=36 Identities=22% Similarity=0.370 Sum_probs=32.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFL 42 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~ 42 (413)
..+|+|||||.+|+.+|..|++.|.+|+|+|+.+..
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 206 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERI 206 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCcc
Confidence 357999999999999999999999999999987543
No 212
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.27 E-value=7.3e-06 Score=78.60 Aligned_cols=55 Identities=13% Similarity=0.112 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCChH
Q 015088 155 AVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWVG 214 (413)
Q Consensus 155 ~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s~ 214 (413)
+.+.+.+.+++.|++++++++|+++.. + +....+.+ +|+++++|.||+|+|...+
T Consensus 238 ~~~~l~~~l~~~GV~i~~~~~v~~i~~--~--~~v~~v~~-~g~~i~~D~Vi~a~G~~p~ 292 (490)
T 2bc0_A 238 LTDLMAKNMEEHGIQLAFGETVKEVAG--N--GKVEKIIT-DKNEYDVDMVILAVGFRPN 292 (490)
T ss_dssp HHHHHHHHHHTTTCEEEETCCEEEEEC--S--SSCCEEEE-SSCEEECSEEEECCCEEEC
T ss_pred HHHHHHHHHHhCCeEEEeCCEEEEEEc--C--CcEEEEEE-CCcEEECCEEEECCCCCcC
Confidence 344456667788999999999999976 5 33333445 5667999999999997543
No 213
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.25 E-value=1.4e-06 Score=82.20 Aligned_cols=34 Identities=24% Similarity=0.363 Sum_probs=30.2
Q ss_pred cEEEECCCHHHHHHHHHHHHcC--CcEEEEcccCCC
Q 015088 9 DVIVVGAGIMGSSAAYQLAKRG--QKTLLLEQFDFL 42 (413)
Q Consensus 9 dvvIIGaG~aG~~~A~~L~~~g--~~V~liE~~~~~ 42 (413)
+|+|||||++|+++|..|++.| .+|+|||++...
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~ 37 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDM 37 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCS
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCC
Confidence 6999999999999999999988 479999997543
No 214
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.24 E-value=5.2e-06 Score=79.24 Aligned_cols=55 Identities=22% Similarity=0.171 Sum_probs=40.8
Q ss_pred HHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcC---CC--cEEEcCEEEEcCCCChH
Q 015088 156 VSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTS---NG--EKFWGKKCVVTAGAWVG 214 (413)
Q Consensus 156 ~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~---~g--~~i~ad~VV~A~G~~s~ 214 (413)
.+.+.+.+++.|++++++++|.++.. + ++.+.+.+. +| +++.+|.||+|+|...+
T Consensus 221 ~~~l~~~l~~~gv~i~~~~~v~~i~~--~--~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~ 280 (470)
T 1dxl_A 221 RKQFQRSLEKQGMKFKLKTKVVGVDT--S--GDGVKLTVEPSAGGEQTIIEADVVLVSAGRTPF 280 (470)
T ss_dssp HHHHHHHHHHSSCCEECSEEEEEEEC--S--SSSEEEEEEESSSCCCEEEEESEEECCCCEEEC
T ss_pred HHHHHHHHHHcCCEEEeCCEEEEEEE--c--CCeEEEEEEecCCCcceEEECCEEEECCCCCcC
Confidence 34456667788999999999999987 5 333555432 44 57999999999997653
No 215
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=98.22 E-value=6.5e-07 Score=84.42 Aligned_cols=35 Identities=20% Similarity=0.204 Sum_probs=31.9
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015088 6 EKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 6 ~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
.++||+|||||++|+++|+.|+++|++|+|||+..
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 34799999999999999999999999999999976
No 216
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.17 E-value=1.1e-05 Score=77.28 Aligned_cols=63 Identities=11% Similarity=0.018 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcCCCc----EEEcCEEEEcCCCChHHhhhhh
Q 015088 154 KAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGE----KFWGKKCVVTAGAWVGKLVKRI 220 (413)
Q Consensus 154 ~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~----~i~ad~VV~A~G~~s~~l~~~~ 220 (413)
.+.+.+.+.+++.|++++++++|++++. + +....+.+.+|+ ++.+|.||+|+|...+++...+
T Consensus 273 ~~~~~~~~~L~~~GV~v~~~~~v~~v~~--~--~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~~~~~~~~l 339 (502)
T 4g6h_A 273 KLSSYAQSHLENTSIKVHLRTAVAKVEE--K--QLLAKTKHEDGKITEETIPYGTLIWATGNKARPVITDL 339 (502)
T ss_dssp HHHHHHHHHHHHTTCEEETTEEEEEECS--S--EEEEEEECTTSCEEEEEEECSEEEECCCEECCHHHHHH
T ss_pred HHHHHHHHHHHhcceeeecCceEEEEeC--C--ceEEEEEecCcccceeeeccCEEEEccCCcCCHHHHhH
Confidence 4556677788899999999999999866 4 234445556664 6999999999997655544433
No 217
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.16 E-value=1.4e-06 Score=85.78 Aligned_cols=39 Identities=28% Similarity=0.459 Sum_probs=35.6
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCC
Q 015088 6 EKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHH 44 (413)
Q Consensus 6 ~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~gg 44 (413)
..+||+|||||++|+++|+.|+++|++|+|||+....++
T Consensus 45 ~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg 83 (623)
T 3pl8_A 45 IKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSG 83 (623)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSS
T ss_pred ccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCC
Confidence 468999999999999999999999999999999887754
No 218
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.14 E-value=1.1e-05 Score=76.21 Aligned_cols=48 Identities=13% Similarity=0.024 Sum_probs=38.4
Q ss_pred HHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCCh
Q 015088 158 MFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWV 213 (413)
Q Consensus 158 ~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s 213 (413)
.+.+.+++.|++++++++|++++. . .+.+++|+++++|.||+|+|...
T Consensus 193 ~~~~~l~~~gV~i~~~~~v~~~~~--~------~v~~~~g~~~~~D~vl~a~G~~P 240 (437)
T 4eqs_A 193 PILDELDKREIPYRLNEEINAING--N------EITFKSGKVEHYDMIIEGVGTHP 240 (437)
T ss_dssp HHHHHHHHTTCCEEESCCEEEEET--T------EEEETTSCEEECSEEEECCCEEE
T ss_pred HHHHHhhccceEEEeccEEEEecC--C------eeeecCCeEEeeeeEEEEeceec
Confidence 345667788999999999988754 3 35667888899999999999654
No 219
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.09 E-value=4.6e-05 Score=72.48 Aligned_cols=36 Identities=14% Similarity=0.258 Sum_probs=32.5
Q ss_pred cccEEEECCCHHHHHHHHHHHHc--CCcEEEEcccCCC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKR--GQKTLLLEQFDFL 42 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~--g~~V~liE~~~~~ 42 (413)
..+|+|||+|.+|+-+|..|++. +.+|+++++....
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~ 264 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASAL 264 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSC
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCC
Confidence 46899999999999999999998 8999999997643
No 220
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=98.09 E-value=4.8e-06 Score=75.43 Aligned_cols=36 Identities=39% Similarity=0.393 Sum_probs=33.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLH 43 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~g 43 (413)
+||+|||||.+|+.+|+.|+++|++|+|+|++....
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~~ 37 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKRM 37 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTSC
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCcC
Confidence 589999999999999999999999999999987543
No 221
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.07 E-value=3.2e-06 Score=80.06 Aligned_cols=39 Identities=28% Similarity=0.413 Sum_probs=35.7
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCC
Q 015088 6 EKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHH 44 (413)
Q Consensus 6 ~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~gg 44 (413)
..+||+|||||++|+++|+.|+++|++|+|+|+.+..||
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG 159 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGG 159 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCST
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCC
Confidence 457999999999999999999999999999999877654
No 222
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.04 E-value=4.7e-05 Score=68.45 Aligned_cols=33 Identities=24% Similarity=0.319 Sum_probs=30.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
.+|+|||+|.+|+-+|..|++.|.+|+++++..
T Consensus 146 ~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 178 (320)
T 1trb_A 146 QKVAVIGGGNTAVEEALYLSNIASEVHLIHRRD 178 (320)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCC
Confidence 479999999999999999999999999999864
No 223
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.03 E-value=4.2e-05 Score=73.17 Aligned_cols=55 Identities=15% Similarity=-0.001 Sum_probs=40.2
Q ss_pred HHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcCCCc-----EEEcCEEEEcCCCCh
Q 015088 156 VSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGE-----KFWGKKCVVTAGAWV 213 (413)
Q Consensus 156 ~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~-----~i~ad~VV~A~G~~s 213 (413)
.+.+.+.+++.|++++++++|.++.. .++ +.+.|.+.++. ++.+|.||+|+|...
T Consensus 230 ~~~l~~~l~~~Gv~i~~~~~v~~i~~--~~~-~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~p 289 (483)
T 3dgh_A 230 AELVAASMEERGIPFLRKTVPLSVEK--QDD-GKLLVKYKNVETGEESEDVYDTVLWAIGRKG 289 (483)
T ss_dssp HHHHHHHHHHTTCCEEETEEEEEEEE--CTT-SCEEEEEEETTTCCEEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHhCCCEEEeCCEEEEEEE--cCC-CcEEEEEecCCCCceeEEEcCEEEECccccc
Confidence 34456667788999999999999987 532 33555544332 689999999999744
No 224
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.01 E-value=5.2e-05 Score=68.69 Aligned_cols=34 Identities=21% Similarity=0.249 Sum_probs=31.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDF 41 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~ 41 (413)
.+|+|||+|..|+-+|..|++.|.+|+++++...
T Consensus 153 ~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~ 186 (335)
T 2zbw_A 153 KRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQ 186 (335)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCc
Confidence 4799999999999999999999999999998643
No 225
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=98.00 E-value=5.7e-06 Score=83.84 Aligned_cols=43 Identities=35% Similarity=0.433 Sum_probs=38.6
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCcc
Q 015088 6 EKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSS 48 (413)
Q Consensus 6 ~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~gg~~~s 48 (413)
..++|+|||||++|+++|++|+++|++|+|+|+....||...+
T Consensus 277 ~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG~~~~ 319 (852)
T 2xag_A 277 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVAT 319 (852)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCCE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCCceee
Confidence 3579999999999999999999999999999999988876444
No 226
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.00 E-value=4.8e-05 Score=69.93 Aligned_cols=57 Identities=11% Similarity=0.127 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHCC-CEEEcCceEEEEEEecccCCCeEEEEcCCCcEEE-cCEEEEcCCCChHH
Q 015088 155 AVSMFQTLAIKNG-AVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFW-GKKCVVTAGAWVGK 215 (413)
Q Consensus 155 ~~~~l~~~~~~~G-v~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~-ad~VV~A~G~~s~~ 215 (413)
+.+.+.+.+++.| ++++++++|.++.. + ++.+.+.+.+|+++. +|.||+|+|...+.
T Consensus 216 ~~~~l~~~l~~~g~v~~~~~~~v~~i~~--~--~~~~~v~~~~g~~~~~~d~vi~a~G~~~~~ 274 (369)
T 3d1c_A 216 TRQRLGNVIKQGARIEMNVHYTVKDIDF--N--NGQYHISFDSGQSVHTPHEPILATGFDATK 274 (369)
T ss_dssp HHHHHHHHHHTTCCEEEECSCCEEEEEE--E--TTEEEEEESSSCCEEESSCCEECCCBCGGG
T ss_pred HHHHHHHHHhhCCcEEEecCcEEEEEEe--c--CCceEEEecCCeEeccCCceEEeeccCCcc
Confidence 3445566667776 99999999999976 5 356677778887665 59999999986543
No 227
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.99 E-value=5.5e-06 Score=82.39 Aligned_cols=43 Identities=35% Similarity=0.433 Sum_probs=38.7
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCcc
Q 015088 6 EKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSS 48 (413)
Q Consensus 6 ~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~gg~~~s 48 (413)
..+||+|||||++|+++|+.|+++|++|+|+|+.+..||...+
T Consensus 106 ~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~~ 148 (662)
T 2z3y_A 106 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVAT 148 (662)
T ss_dssp CCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTCCE
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCCcccc
Confidence 4589999999999999999999999999999999888776444
No 228
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.99 E-value=3.8e-05 Score=72.79 Aligned_cols=34 Identities=21% Similarity=0.422 Sum_probs=31.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDF 41 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~ 41 (413)
.+++|||+|..|+.+|..|++.|.+|+|+++.+.
T Consensus 149 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 182 (449)
T 3kd9_A 149 ENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGER 182 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCc
Confidence 4899999999999999999999999999998754
No 229
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.97 E-value=7.7e-05 Score=71.46 Aligned_cols=33 Identities=24% Similarity=0.190 Sum_probs=30.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEEccc
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~ 39 (413)
..+++|||+|..|+-+|..|++.|.+|+++++.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~ 217 (488)
T 3dgz_A 185 PGKTLVVGASYVALECAGFLTGIGLDTTVMMRS 217 (488)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEcC
Confidence 347999999999999999999999999999975
No 230
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.94 E-value=5.1e-05 Score=69.56 Aligned_cols=34 Identities=21% Similarity=0.164 Sum_probs=30.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDF 41 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~ 41 (413)
.+|+|||+|..|+-+|..|++.|.+|+++++...
T Consensus 164 ~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~ 197 (360)
T 3ab1_A 164 KRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHE 197 (360)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCC
Confidence 4799999999999999999999999999998643
No 231
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.84 E-value=0.00019 Score=69.27 Aligned_cols=32 Identities=25% Similarity=0.196 Sum_probs=29.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEccc
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~ 39 (413)
.+++|||+|..|+-+|..|++.|.+|+|+++.
T Consensus 211 ~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~ 242 (519)
T 3qfa_A 211 GKTLVVGASYVALECAGFLAGIGLDVTVMVRS 242 (519)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEecc
Confidence 46999999999999999999999999999974
No 232
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=97.83 E-value=7e-05 Score=67.30 Aligned_cols=34 Identities=26% Similarity=0.231 Sum_probs=31.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDF 41 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~ 41 (413)
.+|+|||+|..|+-+|..|++.|.+|+++++...
T Consensus 155 ~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~ 188 (323)
T 3f8d_A 155 RVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDT 188 (323)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCC
Confidence 5799999999999999999999999999998654
No 233
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.79 E-value=8.2e-05 Score=66.91 Aligned_cols=33 Identities=21% Similarity=0.356 Sum_probs=30.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
.+|+|||+|..|+-+|..|++.|.+|+++++.+
T Consensus 156 ~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~ 188 (319)
T 3cty_A 156 KRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMP 188 (319)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTBSEEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCC
Confidence 479999999999999999999999999999854
No 234
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=97.79 E-value=0.00012 Score=66.16 Aligned_cols=34 Identities=29% Similarity=0.360 Sum_probs=31.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDF 41 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~ 41 (413)
.+|+|||+|..|+-+|..|++.|.+|+++++...
T Consensus 174 ~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~ 207 (338)
T 3itj_A 174 KPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDH 207 (338)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCc
Confidence 5799999999999999999999999999998654
No 235
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.76 E-value=0.00018 Score=68.42 Aligned_cols=35 Identities=29% Similarity=0.466 Sum_probs=31.9
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDF 41 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~ 41 (413)
..+++|||+|..|+-+|..|++.|.+|+|+++.+.
T Consensus 172 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 206 (466)
T 3l8k_A 172 PQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDR 206 (466)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCc
Confidence 35799999999999999999999999999998654
No 236
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.76 E-value=0.00036 Score=68.58 Aligned_cols=32 Identities=22% Similarity=0.213 Sum_probs=30.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEccc
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~ 39 (413)
.+|+|||||.+|+-+|..|++.|.+|+|+++.
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 47999999999999999999999999999985
No 237
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.75 E-value=0.00019 Score=69.58 Aligned_cols=35 Identities=17% Similarity=0.168 Sum_probs=32.2
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDF 41 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~ 41 (413)
..+|+|||+|.+|+-+|..|++.+.+|+|+++.+.
T Consensus 185 ~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~ 219 (545)
T 3uox_A 185 GKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPN 219 (545)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCC
T ss_pred CCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCC
Confidence 35799999999999999999999999999999764
No 238
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.75 E-value=3.1e-05 Score=75.45 Aligned_cols=56 Identities=13% Similarity=0.194 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHHCCCEEEcCceEEEEEEecccC-CCeEEEEcCCCcEEEcCEEEEcCC
Q 015088 153 TKAVSMFQTLAIKNGAVLRDNMEVKTVLKVKDAV-KGGVTVVTSNGEKFWGKKCVVTAG 210 (413)
Q Consensus 153 ~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~-~~~~~v~~~~g~~i~ad~VV~A~G 210 (413)
..+.++|.+.++..|++++++++|.+|.. +++ +....|.+.+|++++||+||....
T Consensus 378 g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~--~~~~g~v~gV~~~~Ge~i~A~~VVs~~~ 434 (650)
T 1vg0_A 378 GELPQCFCRMCAVFGGIYCLRHSVQCLVV--DKESRKCKAVIDQFGQRIISKHFIIEDS 434 (650)
T ss_dssp THHHHHHHHHHHHTTCEEESSCCEEEEEE--ETTTCCEEEEEETTSCEEECSEEEEEGG
T ss_pred hHHHHHHHHHHHHcCCEEEeCCEeeEEEE--eCCCCeEEEEEeCCCCEEEcCEEEEChh
Confidence 78899999999999999999999999988 632 345566677898999999988544
No 239
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=97.72 E-value=1.3e-05 Score=79.08 Aligned_cols=36 Identities=22% Similarity=0.400 Sum_probs=33.9
Q ss_pred cccEEEECCCHHHHHHHHHHHHcC--------CcEEEEcccC-CC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRG--------QKTLLLEQFD-FL 42 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g--------~~V~liE~~~-~~ 42 (413)
..+|+|||||++|+++|++|+++| ++|+|+|+++ ..
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 578999999999999999999998 9999999998 77
No 240
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.69 E-value=2.6e-05 Score=73.86 Aligned_cols=38 Identities=24% Similarity=0.200 Sum_probs=34.5
Q ss_pred cccEEEECCCHHHHHHHHHHHH-c------CCcEEEEcccCCCCC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAK-R------GQKTLLLEQFDFLHH 44 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~-~------g~~V~liE~~~~~gg 44 (413)
.+||+|||||++|+++|..|++ + |++|+|||+.+..++
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg 47 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWG 47 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCST
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCC
Confidence 5799999999999999999999 7 999999999876654
No 241
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.68 E-value=0.0004 Score=62.03 Aligned_cols=34 Identities=29% Similarity=0.283 Sum_probs=31.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDF 41 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~ 41 (413)
.+|+|||+|..|+-+|..|++.|.+|+++++.+.
T Consensus 144 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 177 (311)
T 2q0l_A 144 KEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDG 177 (311)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCc
Confidence 5799999999999999999999999999998643
No 242
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.68 E-value=0.00016 Score=65.19 Aligned_cols=34 Identities=21% Similarity=0.281 Sum_probs=31.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDF 41 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~ 41 (413)
.+|+|||+|..|+-+|..|++.|.+|+++++.+.
T Consensus 153 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 186 (325)
T 2q7v_A 153 KKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDT 186 (325)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCc
Confidence 4799999999999999999999999999998643
No 243
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.68 E-value=0.00017 Score=64.60 Aligned_cols=34 Identities=29% Similarity=0.273 Sum_probs=31.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDF 41 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~ 41 (413)
.+++|||+|..|+-+|..|++.|.+|+++++...
T Consensus 148 ~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~ 181 (315)
T 3r9u_A 148 KEVAVLGGGDTALEEALYLANICSKIYLIHRRDE 181 (315)
T ss_dssp SEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCC
Confidence 5799999999999999999999999999998643
No 244
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.65 E-value=3.9e-05 Score=80.05 Aligned_cols=39 Identities=23% Similarity=0.326 Sum_probs=35.2
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCC-cEEEEcccCCCCCC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQ-KTLLLEQFDFLHHR 45 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~-~V~liE~~~~~gg~ 45 (413)
.+||+|||||++|+++|++|+++|+ +|+|+|+.+..||.
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~ 226 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGL 226 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTH
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCcc
Confidence 5799999999999999999999999 79999998776543
No 245
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.64 E-value=0.00056 Score=66.15 Aligned_cols=35 Identities=20% Similarity=0.167 Sum_probs=32.2
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDF 41 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~ 41 (413)
..+|+|||+|.+|+-+|..|++.+.+|+|+++.+.
T Consensus 178 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 178 GRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred cceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 35799999999999999999999999999999764
No 246
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.64 E-value=4e-05 Score=73.44 Aligned_cols=38 Identities=21% Similarity=0.368 Sum_probs=33.9
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHc--CCcEEEEcccCCC
Q 015088 5 GEKFDVIVVGAGIMGSSAAYQLAKR--GQKTLLLEQFDFL 42 (413)
Q Consensus 5 ~~~~dvvIIGaG~aG~~~A~~L~~~--g~~V~liE~~~~~ 42 (413)
..++||+|||||++|+++|..|.++ |.+|+|||++...
T Consensus 9 ~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~ 48 (493)
T 1m6i_A 9 PSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPEL 48 (493)
T ss_dssp CSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSC
T ss_pred CCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCC
Confidence 4568999999999999999999887 8899999998654
No 247
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.62 E-value=4.4e-05 Score=72.39 Aligned_cols=39 Identities=23% Similarity=0.192 Sum_probs=34.8
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcC--CcEEEEcccCCCCC
Q 015088 6 EKFDVIVVGAGIMGSSAAYQLAKRG--QKTLLLEQFDFLHH 44 (413)
Q Consensus 6 ~~~dvvIIGaG~aG~~~A~~L~~~g--~~V~liE~~~~~gg 44 (413)
..+||+|||||++|+.+|..|+++| ++|+|||+.+..++
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg 45 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFG 45 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCT
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCc
Confidence 4579999999999999999999998 99999999877653
No 248
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=97.60 E-value=5.1e-05 Score=72.94 Aligned_cols=37 Identities=30% Similarity=0.481 Sum_probs=34.1
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCC
Q 015088 5 GEKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDF 41 (413)
Q Consensus 5 ~~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~ 41 (413)
..++|++|||+|.+|+.+|++|++.|.+|+|||++..
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~ 45 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRS 45 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 4579999999999999999999999999999999853
No 249
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=97.58 E-value=0.00019 Score=69.60 Aligned_cols=35 Identities=17% Similarity=0.237 Sum_probs=32.1
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDF 41 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~ 41 (413)
..+|+|||+|.+|+-+|..|++.+.+|+|+++.+.
T Consensus 191 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 191 GKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSAN 225 (549)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 35799999999999999999999999999999764
No 250
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.58 E-value=0.00026 Score=63.22 Aligned_cols=34 Identities=35% Similarity=0.281 Sum_probs=30.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDF 41 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~ 41 (413)
.+|+|||+|.+|+-+|..|++.|.+|+++++.+.
T Consensus 145 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 178 (310)
T 1fl2_A 145 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPE 178 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcc
Confidence 4799999999999999999999999999998643
No 251
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.54 E-value=0.00032 Score=63.35 Aligned_cols=34 Identities=26% Similarity=0.319 Sum_probs=31.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDF 41 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~ 41 (413)
.+|+|||+|..|+-+|..|++.|.+|+++++...
T Consensus 160 ~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~ 193 (333)
T 1vdc_A 160 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDA 193 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred CeEEEECCChHHHHHHHHHHhcCCeEEEEecCCc
Confidence 5799999999999999999999999999998653
No 252
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.48 E-value=0.00029 Score=63.51 Aligned_cols=34 Identities=18% Similarity=0.179 Sum_probs=30.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDF 41 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~ 41 (413)
.+++|||+|..|+-+|..|++.|.+|+++++...
T Consensus 155 ~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~ 188 (332)
T 3lzw_A 155 RRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDK 188 (332)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSS
T ss_pred CEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCc
Confidence 5799999999999999999999999999998643
No 253
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=97.47 E-value=0.00027 Score=62.56 Aligned_cols=52 Identities=10% Similarity=0.184 Sum_probs=39.0
Q ss_pred HHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCCh-HHhhhhh
Q 015088 161 TLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWV-GKLVKRI 220 (413)
Q Consensus 161 ~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s-~~l~~~~ 220 (413)
+.+++.|++++. ++|.++.. + + .+.+.+|+++.+|.||+|+|... ..++..+
T Consensus 182 ~~l~~~gv~i~~-~~v~~i~~--~---~--~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~~ 234 (297)
T 3fbs_A 182 ALLAARGVRVET-TRIREIAG--H---A--DVVLADGRSIALAGLFTQPKLRITVDWIEKL 234 (297)
T ss_dssp HHHHHTTCEEEC-SCEEEEET--T---E--EEEETTSCEEEESEEEECCEEECCCSCHHHH
T ss_pred HHHHHCCcEEEc-ceeeeeec--C---C--eEEeCCCCEEEEEEEEEccCcccCchhHHhc
Confidence 345567999995 88988866 4 2 67777888899999999999753 2555554
No 254
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.45 E-value=0.00031 Score=63.60 Aligned_cols=33 Identities=24% Similarity=0.312 Sum_probs=30.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
.+|+|||+|..|+-+|..|++.|.+|+++++..
T Consensus 156 ~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~ 188 (335)
T 2a87_A 156 QDIAVIGGGDSAMEEATFLTRFARSVTLVHRRD 188 (335)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCC
Confidence 579999999999999999999999999999864
No 255
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.37 E-value=0.0014 Score=61.94 Aligned_cols=35 Identities=11% Similarity=0.095 Sum_probs=29.8
Q ss_pred cccEEEECCCHHHHHHHHHHH--------------------HcCC-cEEEEcccCC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLA--------------------KRGQ-KTLLLEQFDF 41 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~--------------------~~g~-~V~liE~~~~ 41 (413)
..+|+|||+|..|+-+|..|+ +.|. +|+|++++..
T Consensus 145 ~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~ 200 (460)
T 1cjc_A 145 CDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGP 200 (460)
T ss_dssp SSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCG
T ss_pred CCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCCh
Confidence 357999999999999999999 5676 6999998654
No 256
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.13 E-value=0.0013 Score=62.08 Aligned_cols=58 Identities=12% Similarity=0.055 Sum_probs=38.5
Q ss_pred HHHHHHHHHH------CCCEEEcCceEEEEEEecccCCCeEEEEc--------------CCC--cEEEcCEEEEcCCCCh
Q 015088 156 VSMFQTLAIK------NGAVLRDNMEVKTVLKVKDAVKGGVTVVT--------------SNG--EKFWGKKCVVTAGAWV 213 (413)
Q Consensus 156 ~~~l~~~~~~------~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~--------------~~g--~~i~ad~VV~A~G~~s 213 (413)
.+.|.+.+.+ .|+++++++.+.+|.. ++.-..+.+.. .+| +++.+|.||+|+|...
T Consensus 249 ~~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~--~~~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~~p 326 (456)
T 1lqt_A 249 IKVLRGYADREPRPGHRRMVFRFLTSPIEIKG--KRKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGYRG 326 (456)
T ss_dssp HHHHHHHHTCC-CTTSEEEEEECSEEEEEEEC--SSSCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECSEEEECSCEEC
T ss_pred HHHHHHHhhcCCCCCCceEEEEeCCCCeEEec--CCcEeEEEEEEEEecCCCcccccccCCCceEEEEcCEEEEcccccc
Confidence 4455555555 7899999999999976 51112243331 134 3689999999999765
Q ss_pred HH
Q 015088 214 GK 215 (413)
Q Consensus 214 ~~ 215 (413)
+.
T Consensus 327 ~~ 328 (456)
T 1lqt_A 327 VP 328 (456)
T ss_dssp CC
T ss_pred CC
Confidence 44
No 257
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.11 E-value=0.0015 Score=63.00 Aligned_cols=34 Identities=35% Similarity=0.281 Sum_probs=31.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDF 41 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~ 41 (413)
.+|+|||+|.+|+-+|..|++.|.+|+++++.+.
T Consensus 356 k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~ 389 (521)
T 1hyu_A 356 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPE 389 (521)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcc
Confidence 4799999999999999999999999999998643
No 258
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=96.95 E-value=0.0023 Score=66.38 Aligned_cols=33 Identities=12% Similarity=0.087 Sum_probs=30.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
..|+|||+|..|+-+|..|++.|.+|+|+|+.+
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~ 317 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARS 317 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCS
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCC
Confidence 479999999999999999999999999999864
No 259
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=96.90 E-value=0.017 Score=55.83 Aligned_cols=33 Identities=24% Similarity=0.356 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
..|+|||+|.+|+-+|..|++.+.+|+++++.+
T Consensus 187 k~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~ 219 (542)
T 1w4x_A 187 QRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTP 219 (542)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHBSEEEEEESSC
T ss_pred CEEEEECCCccHHHHHHHHhhcCceEEEEEcCC
Confidence 579999999999999999999999999999864
No 260
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.74 E-value=0.0016 Score=51.50 Aligned_cols=35 Identities=17% Similarity=0.391 Sum_probs=31.8
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015088 6 EKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 6 ~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
....|+|||+|..|..+|..|.+.|++|+++|++.
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 34679999999999999999999999999999864
No 261
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=96.67 E-value=0.0021 Score=49.86 Aligned_cols=33 Identities=24% Similarity=0.494 Sum_probs=30.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
..|+|+|+|..|..+|..|.++|++|+++|++.
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 579999999999999999999999999999864
No 262
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=96.57 E-value=0.012 Score=61.53 Aligned_cols=33 Identities=27% Similarity=0.275 Sum_probs=30.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCC-cEEEEcccC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQ-KTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~-~V~liE~~~ 40 (413)
-+|+|||||..|+-+|..|.+.|. +|+|+++++
T Consensus 333 ~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 333 GAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CcEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 389999999999999999999996 899999864
No 263
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=96.49 E-value=0.008 Score=56.30 Aligned_cols=58 Identities=16% Similarity=0.054 Sum_probs=41.8
Q ss_pred HHHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEEcC--CCcEEEcCEEEEcCCCChHHhhhh
Q 015088 156 VSMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTS--NGEKFWGKKCVVTAGAWVGKLVKR 219 (413)
Q Consensus 156 ~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~--~g~~i~ad~VV~A~G~~s~~l~~~ 219 (413)
...+.+.+++.|++++++++|++|+. + .+.+... +++++.+|.||+|+|......+..
T Consensus 203 ~~~l~~~l~~~GV~i~~~~~v~~v~~--~----~v~~~~~~~~g~~i~~D~vv~a~G~~~~~~l~~ 262 (430)
T 3h28_A 203 KRLVEDLFAERNIDWIANVAVKAIEP--D----KVIYEDLNGNTHEVPAKFTMFMPSFQGPEVVAS 262 (430)
T ss_dssp HHHHHHHHHHTTCEEECSCEEEEECS--S----EEEEECTTSCEEEEECSEEEEECEEECCHHHHT
T ss_pred HHHHHHHHHHCCCEEEeCCEEEEEeC--C----eEEEEecCCCceEEeeeEEEECCCCccchhHhh
Confidence 34456677888999999999999855 3 3444432 256899999999999765454444
No 264
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=96.49 E-value=0.0043 Score=56.25 Aligned_cols=32 Identities=19% Similarity=0.378 Sum_probs=29.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
.+|+|||+|.+|+-+|..|++.| +|+++.+..
T Consensus 164 ~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~ 195 (357)
T 4a9w_A 164 MRVAIIGGGNSGAQILAEVSTVA-ETTWITQHE 195 (357)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTS-EEEEECSSC
T ss_pred CEEEEECCCcCHHHHHHHHHhhC-CEEEEECCC
Confidence 57999999999999999999998 699999863
No 265
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.46 E-value=0.0044 Score=47.98 Aligned_cols=35 Identities=20% Similarity=0.195 Sum_probs=32.0
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015088 6 EKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 6 ~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
.+-+|+|||.|..|..+|..|.+.|++|+++|++.
T Consensus 6 ~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 6 ICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 34579999999999999999999999999999864
No 266
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=96.42 E-value=0.0032 Score=48.54 Aligned_cols=33 Identities=24% Similarity=0.489 Sum_probs=30.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
++|+|||+|..|...|..|.+.|++|+++|++.
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 579999999999999999999999999999853
No 267
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=96.39 E-value=0.014 Score=54.72 Aligned_cols=51 Identities=12% Similarity=-0.025 Sum_probs=36.8
Q ss_pred HHHHHHHHHCCCEEEcCceEEEEEEecccCCCeEEEE--cCC-----CcEEEcCEEEEcCCCCh
Q 015088 157 SMFQTLAIKNGAVLRDNMEVKTVLKVKDAVKGGVTVV--TSN-----GEKFWGKKCVVTAGAWV 213 (413)
Q Consensus 157 ~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~--~~~-----g~~i~ad~VV~A~G~~s 213 (413)
..+.+.+++.|++++++++|++++. + .+.+. ..+ ++++.+|.+|+|+|...
T Consensus 212 ~~~~~~l~~~gI~~~~~~~v~~v~~--~----~v~~~~~~~~g~~~~~~~i~~D~vv~~~g~~~ 269 (437)
T 3sx6_A 212 GILTKGLKEEGIEAYTNCKVTKVED--N----KMYVTQVDEKGETIKEMVLPVKFGMMIPAFKG 269 (437)
T ss_dssp HHHHHHHHHTTCEEECSEEEEEEET--T----EEEEEEECTTSCEEEEEEEECSEEEEECCEEC
T ss_pred HHHHHHHHHCCCEEEcCCEEEEEEC--C----eEEEEecccCCccccceEEEEeEEEEcCCCcC
Confidence 3455667788999999999999865 3 33333 233 45789999999998543
No 268
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=96.25 E-value=0.0046 Score=46.02 Aligned_cols=34 Identities=24% Similarity=0.330 Sum_probs=30.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHcC-CcEEEEcccC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRG-QKTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g-~~V~liE~~~ 40 (413)
...|+|+|+|..|..++..|.+.| ++|++++++.
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 357999999999999999999999 8999999853
No 269
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=96.18 E-value=0.0068 Score=47.70 Aligned_cols=33 Identities=30% Similarity=0.485 Sum_probs=30.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEEccc
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~ 39 (413)
+..|+|+|+|..|...|..|.+.|++|+++|++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 357999999999999999999999999999986
No 270
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=96.14 E-value=0.005 Score=56.76 Aligned_cols=35 Identities=17% Similarity=0.339 Sum_probs=32.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFL 42 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~ 42 (413)
.+|+|||||..|+-+|..|++.|.+|+|+|+.+..
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~ 181 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIIDSGTPASIGIILEYP 181 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCcc
Confidence 47999999999999999999999999999997654
No 271
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=96.10 E-value=0.0042 Score=55.36 Aligned_cols=35 Identities=23% Similarity=0.248 Sum_probs=32.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFL 42 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~ 42 (413)
.+|+|||||..|+-+|..|++.|.+|+|+|+.+..
T Consensus 146 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 180 (312)
T 4gcm_A 146 KRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDEL 180 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeccccc
Confidence 47999999999999999999999999999987654
No 272
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=96.04 E-value=0.025 Score=50.12 Aligned_cols=53 Identities=6% Similarity=0.056 Sum_probs=35.0
Q ss_pred HHCCCEEEcCceEEEEEEecccCCCeEEEEcCCCcEEEcCEEEEcCCCChH-Hhhhhh
Q 015088 164 IKNGAVLRDNMEVKTVLKVKDAVKGGVTVVTSNGEKFWGKKCVVTAGAWVG-KLVKRI 220 (413)
Q Consensus 164 ~~~Gv~i~~~~~V~~i~~~~~~~~~~~~v~~~~g~~i~ad~VV~A~G~~s~-~l~~~~ 220 (413)
++.|++++.+ .+..+.. ++ +....+++.+|+++.+|.+|+++|...+ .++..+
T Consensus 191 ~~~g~~~~~~-~v~~~~~--~~-~~~~~v~~~~g~~i~~~~~vi~~g~~~~~~~~~~~ 244 (304)
T 4fk1_A 191 SNKNIPVITE-SIRTLQG--EG-GYLKKVEFHSGLRIERAGGFIVPTFFRPNQFIEQL 244 (304)
T ss_dssp HTTTCCEECS-CEEEEES--GG-GCCCEEEETTSCEECCCEEEECCEEECSSCHHHHT
T ss_pred hccceeEeee-eEEEeec--CC-CeeeeeeccccceeeecceeeeeccccCChhhhhc
Confidence 4457777755 4666655 42 2445678889988999999998886443 444444
No 273
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=96.01 E-value=0.0064 Score=54.00 Aligned_cols=33 Identities=33% Similarity=0.457 Sum_probs=30.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEEccc
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~ 39 (413)
...|.|||+|..|...|..++.+|++|+|+|..
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~ 38 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIE 38 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSC
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECC
Confidence 457999999999999999999999999999975
No 274
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=95.93 E-value=0.039 Score=52.74 Aligned_cols=33 Identities=24% Similarity=0.422 Sum_probs=29.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHc--CCcEEEEcccC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKR--GQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~--g~~V~liE~~~ 40 (413)
.+|+|||+|-+|+-++..|++. +.+|+++=++.
T Consensus 247 KrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~ 281 (501)
T 4b63_A 247 YNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDS 281 (501)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSS
T ss_pred cEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCC
Confidence 4699999999999999999975 67999998864
No 275
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=95.83 E-value=0.01 Score=53.33 Aligned_cols=36 Identities=22% Similarity=0.460 Sum_probs=32.1
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHcCC-cEEEEcccC
Q 015088 5 GEKFDVIVVGAGIMGSSAAYQLAKRGQ-KTLLLEQFD 40 (413)
Q Consensus 5 ~~~~dvvIIGaG~aG~~~A~~L~~~g~-~V~liE~~~ 40 (413)
+....|+|||+|..|..+|..|++.|+ +|+|+|.+.
T Consensus 7 ~~~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 7 QRRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 334689999999999999999999998 999999864
No 276
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=95.80 E-value=0.0083 Score=56.82 Aligned_cols=35 Identities=20% Similarity=0.358 Sum_probs=32.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFL 42 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~ 42 (413)
.+++|||||.+|+.+|..|++.|.+|+|+|+.+..
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 204 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEI 204 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCcc
Confidence 57999999999999999999999999999997654
No 277
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=95.76 E-value=0.0097 Score=45.98 Aligned_cols=33 Identities=24% Similarity=0.414 Sum_probs=30.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
..|+|+|+|..|..+|..|.+.|++|+++|++.
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 469999999999999999999999999999853
No 278
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=95.76 E-value=0.0097 Score=53.13 Aligned_cols=40 Identities=35% Similarity=0.650 Sum_probs=30.9
Q ss_pred CCCCCCcccEEEECCCHHHHHHHHHHHHcCC--cEEEEcccC
Q 015088 1 MEFPGEKFDVIVVGAGIMGSSAAYQLAKRGQ--KTLLLEQFD 40 (413)
Q Consensus 1 m~~~~~~~dvvIIGaG~aG~~~A~~L~~~g~--~V~liE~~~ 40 (413)
|.|+++..+|+|||+|..|.++|+.|+..|. +|+|+|...
T Consensus 1 ~~m~~~~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 1 MEMVKSRSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp ------CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCCCCCCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 5544445789999999999999999999987 899999764
No 279
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=95.68 E-value=0.01 Score=56.12 Aligned_cols=35 Identities=29% Similarity=0.503 Sum_probs=32.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFL 42 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~ 42 (413)
.+|+|||||.+|+.+|..|++.|.+|+|+|+.+..
T Consensus 168 ~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~ 202 (455)
T 2yqu_A 168 KRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRI 202 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCcc
Confidence 57999999999999999999999999999997654
No 280
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=95.59 E-value=0.009 Score=53.13 Aligned_cols=34 Identities=32% Similarity=0.429 Sum_probs=31.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDF 41 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~ 41 (413)
.+++|||||..|+-+|..|++.|.+|+|+++...
T Consensus 153 ~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~ 186 (314)
T 4a5l_A 153 KVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDA 186 (314)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred CeEEEECCChHHHHHHHHHHHhCCeeeeeccccc
Confidence 5799999999999999999999999999997643
No 281
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=95.53 E-value=0.012 Score=54.05 Aligned_cols=36 Identities=25% Similarity=0.433 Sum_probs=32.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFL 42 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~ 42 (413)
..+++|||+|.+|+.+|..|++.|.+|+|+|+.+..
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 180 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQV 180 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcch
Confidence 357999999999999999999999999999997654
No 282
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=95.51 E-value=0.011 Score=49.51 Aligned_cols=32 Identities=16% Similarity=0.241 Sum_probs=30.1
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015088 9 DVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 9 dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
.|+|+|+|..|...|..|.++|++|+++|++.
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 49999999999999999999999999999864
No 283
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=95.51 E-value=0.013 Score=52.08 Aligned_cols=40 Identities=33% Similarity=0.399 Sum_probs=31.4
Q ss_pred CCCCCCcccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015088 1 MEFPGEKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 1 m~~~~~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
|.+.....+|.|||.|..|...|..|++.|++|++++++.
T Consensus 1 M~~~~~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 1 MSLTGTDFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp ------CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCCCCCCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 4433345689999999999999999999999999999863
No 284
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.50 E-value=0.013 Score=47.52 Aligned_cols=33 Identities=30% Similarity=0.493 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHc-CCcEEEEcccC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKR-GQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~-g~~V~liE~~~ 40 (413)
..|+|||+|..|..+|..|.+. |++|+++|++.
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 4799999999999999999999 99999999864
No 285
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=95.50 E-value=0.015 Score=51.59 Aligned_cols=32 Identities=34% Similarity=0.553 Sum_probs=30.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEccc
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~ 39 (413)
..|.|||+|..|...|..|+++|++|+++|++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~ 47 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQT 47 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 46999999999999999999999999999985
No 286
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=95.45 E-value=0.016 Score=50.78 Aligned_cols=33 Identities=30% Similarity=0.438 Sum_probs=30.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
..|.|||+|..|...|..|+++|++|+++|++.
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 479999999999999999999999999999853
No 287
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=95.43 E-value=0.014 Score=55.01 Aligned_cols=36 Identities=39% Similarity=0.433 Sum_probs=32.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFL 42 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~ 42 (413)
..+++|||||.+|+.+|..|++.|.+|+|+|+.+..
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 202 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAP 202 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCch
Confidence 357999999999999999999999999999997653
No 288
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=95.37 E-value=0.015 Score=54.01 Aligned_cols=36 Identities=25% Similarity=0.378 Sum_probs=32.9
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFL 42 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~ 42 (413)
..+|+|||+|..|+-+|..|++.|.+|+|+|+.+..
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 180 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRL 180 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcc
Confidence 357999999999999999999999999999997654
No 289
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=95.33 E-value=0.016 Score=51.62 Aligned_cols=34 Identities=32% Similarity=0.436 Sum_probs=30.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
...|.|||+|..|...|..|+++|++|+++|++.
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999999863
No 290
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=95.32 E-value=0.024 Score=50.29 Aligned_cols=35 Identities=34% Similarity=0.529 Sum_probs=31.9
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015088 6 EKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 6 ~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
...+|.|||.|..|...|..|++.|++|++++++.
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 45689999999999999999999999999999863
No 291
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=95.31 E-value=0.017 Score=51.52 Aligned_cols=34 Identities=24% Similarity=0.516 Sum_probs=31.1
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCC-cEEEEcccC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQ-KTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~-~V~liE~~~ 40 (413)
...|.|||+|..|...|..|++.|+ +|+++|.+.
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 4579999999999999999999998 999999864
No 292
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=95.30 E-value=0.016 Score=51.77 Aligned_cols=33 Identities=30% Similarity=0.527 Sum_probs=30.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
.+|.|||+|..|.+.|..|++.|++|++++++.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 479999999999999999999999999999853
No 293
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=95.20 E-value=0.023 Score=54.68 Aligned_cols=36 Identities=17% Similarity=0.098 Sum_probs=32.0
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCC
Q 015088 6 EKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDF 41 (413)
Q Consensus 6 ~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~ 41 (413)
...+++|||||+.|+-.|..+++.|.+|+|+++...
T Consensus 222 lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~ 257 (542)
T 4b1b_A 222 DPGKTLVVGASYVALECSGFLNSLGYDVTVAVRSIV 257 (542)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCS
T ss_pred CCceEEEECCCHHHHHHHHHHHhcCCeEEEeccccc
Confidence 346899999999999999999999999999987543
No 294
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=95.20 E-value=0.018 Score=54.44 Aligned_cols=35 Identities=29% Similarity=0.323 Sum_probs=32.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFL 42 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~ 42 (413)
.+++|||||.+|+.+|..|++.|.+|+|+|+.+..
T Consensus 167 ~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~ 201 (463)
T 2r9z_A 167 KRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRL 201 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcc
Confidence 47999999999999999999999999999997654
No 295
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=95.15 E-value=0.017 Score=51.49 Aligned_cols=33 Identities=27% Similarity=0.451 Sum_probs=30.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
.+|.|||+|..|.+.|..|++.|++|++++++.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 469999999999999999999999999999853
No 296
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=95.12 E-value=0.043 Score=52.11 Aligned_cols=35 Identities=31% Similarity=0.352 Sum_probs=32.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFL 42 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~ 42 (413)
.+++|||||..|+-+|..|++.|.+|+|+|+.+..
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 220 (479)
T 2hqm_A 186 KKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETV 220 (479)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCcc
Confidence 57999999999999999999999999999997654
No 297
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=95.10 E-value=0.068 Score=49.58 Aligned_cols=36 Identities=31% Similarity=0.441 Sum_probs=32.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFL 42 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~ 42 (413)
..+|+|||+|..|+-+|..|++.|.+|+++++.+..
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~ 178 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDEL 178 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCcc
Confidence 357999999999999999999999999999997654
No 298
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=95.09 E-value=0.023 Score=51.21 Aligned_cols=32 Identities=28% Similarity=0.378 Sum_probs=30.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEccc
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~ 39 (413)
.+|.|||+|..|...|..|++.|++|+++++.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 47999999999999999999999999999974
No 299
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=95.06 E-value=0.023 Score=51.56 Aligned_cols=33 Identities=36% Similarity=0.519 Sum_probs=31.0
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEEccc
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~ 39 (413)
..+|.|||+|..|.+.|..|++.|++|++++++
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSC
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCC
Confidence 468999999999999999999999999999985
No 300
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=95.05 E-value=0.02 Score=54.19 Aligned_cols=34 Identities=21% Similarity=0.396 Sum_probs=31.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
.+.|.|||+|..|+..|..|++.|++|+++|++.
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 5789999999999999999999999999999863
No 301
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=95.04 E-value=0.0093 Score=56.21 Aligned_cols=34 Identities=21% Similarity=0.434 Sum_probs=31.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
.++|+|+|+|-.|...|..|.+.|++|+|||++.
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 5679999999999999999999999999999874
No 302
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=94.96 E-value=0.023 Score=53.90 Aligned_cols=35 Identities=20% Similarity=0.395 Sum_probs=32.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFL 42 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~ 42 (413)
.+++|||||..|+-+|..|++.|.+|+|+|+.+..
T Consensus 179 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 213 (474)
T 1zmd_A 179 EKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHV 213 (474)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCcc
Confidence 57999999999999999999999999999997654
No 303
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=94.93 E-value=0.075 Score=51.92 Aligned_cols=45 Identities=27% Similarity=0.373 Sum_probs=39.9
Q ss_pred CCCCcccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCCCCCCc
Q 015088 3 FPGEKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFLHHRGS 47 (413)
Q Consensus 3 ~~~~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~gg~~~ 47 (413)
.+..+|||+|||+|+.|+..|..|++.|++|++||+++..||...
T Consensus 4 ~~~~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~~~ 48 (650)
T 1vg0_A 4 NLPSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWA 48 (650)
T ss_dssp CCCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGC
T ss_pred cCCCcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCccc
Confidence 345579999999999999999999999999999999998876533
No 304
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=94.89 E-value=0.025 Score=53.97 Aligned_cols=36 Identities=19% Similarity=0.290 Sum_probs=33.0
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFL 42 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~ 42 (413)
..+|+|||||..|+-+|..|++.|.+|+|+++.+..
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 209 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSV 209 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcc
Confidence 357999999999999999999999999999998754
No 305
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=94.89 E-value=0.025 Score=50.54 Aligned_cols=33 Identities=33% Similarity=0.528 Sum_probs=30.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCC--cEEEEccc
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQ--KTLLLEQF 39 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~--~V~liE~~ 39 (413)
...|+|||+|..|...|..|++.|+ +|+++|++
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~ 41 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIA 41 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 4579999999999999999999998 99999985
No 306
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=94.86 E-value=0.032 Score=50.15 Aligned_cols=40 Identities=18% Similarity=0.220 Sum_probs=32.4
Q ss_pred CCCCCCcccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015088 1 MEFPGEKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 1 m~~~~~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
|+.......|.|||.|..|.+.|..|.+.|++|++++++.
T Consensus 2 m~~~~~~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 2 MTTKDISRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp ----CCSSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCccCCCCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4433445679999999999999999999999999999864
No 307
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=94.83 E-value=0.026 Score=49.55 Aligned_cols=34 Identities=29% Similarity=0.548 Sum_probs=30.7
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015088 6 EKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 6 ~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
.+..|.|||+|..|...|..|+ +|++|+++|++.
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 4578999999999999999999 999999999863
No 308
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=94.82 E-value=0.026 Score=50.23 Aligned_cols=32 Identities=31% Similarity=0.614 Sum_probs=29.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEccc
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~ 39 (413)
+.|.|||+|..|...|..|++.|++|++++++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECC
Confidence 46999999999999999999999999999975
No 309
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=94.82 E-value=0.031 Score=46.53 Aligned_cols=35 Identities=17% Similarity=0.330 Sum_probs=31.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDF 41 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~ 41 (413)
...|.|||+|..|.+.|..|++.|++|++++++..
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 35799999999999999999999999999998653
No 310
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=94.81 E-value=0.021 Score=50.33 Aligned_cols=33 Identities=27% Similarity=0.563 Sum_probs=30.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
.+|.|||+|..|.+.|..|++.|++|++++++.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 469999999999999999999999999999863
No 311
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=94.80 E-value=0.032 Score=49.82 Aligned_cols=34 Identities=21% Similarity=0.510 Sum_probs=30.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCC-cEEEEcccC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQ-KTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~-~V~liE~~~ 40 (413)
...|+|||+|..|..+|..|+..|+ +|+|+|.+.
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 3579999999999999999999998 999999753
No 312
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=94.79 E-value=0.03 Score=46.84 Aligned_cols=33 Identities=18% Similarity=0.306 Sum_probs=30.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEEccc
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~ 39 (413)
...|+|||||-.|...|..|.+.|.+|+|++..
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 468999999999999999999999999999974
No 313
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=94.78 E-value=0.029 Score=49.29 Aligned_cols=32 Identities=22% Similarity=0.328 Sum_probs=30.1
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015088 9 DVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 9 dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
+|.|||+|..|...|..|++.|++|++++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 33 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVP 33 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCc
Confidence 49999999999999999999999999999864
No 314
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=94.72 E-value=0.026 Score=52.38 Aligned_cols=33 Identities=18% Similarity=0.387 Sum_probs=30.2
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
.+.|.|||+|..|+..|..|++ |++|+++|++.
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~ 68 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQ 68 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCH
T ss_pred CCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCH
Confidence 4589999999999999999998 99999999864
No 315
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=94.70 E-value=0.029 Score=52.80 Aligned_cols=34 Identities=29% Similarity=0.273 Sum_probs=31.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
...|.|||.|.+|+++|..|.++|++|++.|.+.
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 4579999999999999999999999999999864
No 316
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=94.70 E-value=0.021 Score=50.42 Aligned_cols=35 Identities=14% Similarity=0.154 Sum_probs=31.9
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDF 41 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~ 41 (413)
..+|.|||.|..|...|..|++.|++|++++++..
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 45899999999999999999999999999998753
No 317
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=94.66 E-value=0.028 Score=53.77 Aligned_cols=36 Identities=11% Similarity=0.241 Sum_probs=32.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFL 42 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~ 42 (413)
..+++|||||..|+-+|..|++.|.+|+|+|+.+..
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 211 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRI 211 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSS
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCcc
Confidence 357999999999999999999999999999997654
No 318
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=94.62 E-value=0.04 Score=48.94 Aligned_cols=33 Identities=30% Similarity=0.536 Sum_probs=30.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCC-cEEEEccc
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQ-KTLLLEQF 39 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~-~V~liE~~ 39 (413)
...|.|||+|..|.++|+.|+..|+ +|+|+|..
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 4579999999999999999999999 99999986
No 319
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=94.58 E-value=0.019 Score=49.63 Aligned_cols=34 Identities=24% Similarity=0.378 Sum_probs=31.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
...|+|||||-.|...|..|.+.|.+|+|++...
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 4679999999999999999999999999999854
No 320
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=94.57 E-value=0.032 Score=50.67 Aligned_cols=32 Identities=31% Similarity=0.254 Sum_probs=30.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEccc
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~ 39 (413)
.+|.|||+|..|...|..|++.|++|++++++
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~ 36 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDID 36 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 57999999999999999999999999999975
No 321
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=94.55 E-value=0.033 Score=52.24 Aligned_cols=33 Identities=27% Similarity=0.399 Sum_probs=30.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
++|.|||+|..|+..|..|+++|++|+++|++.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 479999999999999999999999999999864
No 322
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=94.52 E-value=0.035 Score=51.86 Aligned_cols=36 Identities=11% Similarity=0.270 Sum_probs=32.9
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCC
Q 015088 6 EKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDF 41 (413)
Q Consensus 6 ~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~ 41 (413)
...++.|||.|..|+..|..|+++|++|+++|++..
T Consensus 7 ~~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 7 GSVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred CceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 357899999999999999999999999999999754
No 323
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=94.52 E-value=0.034 Score=51.65 Aligned_cols=35 Identities=20% Similarity=0.238 Sum_probs=31.8
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015088 6 EKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 6 ~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
.+..|+|||.|..|+.+|..|+++|++|+.+|-+.
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 34689999999999999999999999999999764
No 324
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=94.51 E-value=0.08 Score=50.48 Aligned_cols=35 Identities=23% Similarity=0.281 Sum_probs=32.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHc---CCcEEEEcccCCC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKR---GQKTLLLEQFDFL 42 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~---g~~V~liE~~~~~ 42 (413)
.+++|||+|..|+-+|..|++. |.+|+|+++.+..
T Consensus 192 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~ 229 (495)
T 2wpf_A 192 RRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLI 229 (495)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCcc
Confidence 5799999999999999999999 9999999997654
No 325
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=94.41 E-value=0.045 Score=51.16 Aligned_cols=33 Identities=27% Similarity=0.458 Sum_probs=30.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
..|.|||+|..|...|..|+++|++|+++|++.
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 87 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFLVVRNE 87 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECcH
Confidence 579999999999999999999999999999864
No 326
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=94.38 E-value=0.045 Score=48.64 Aligned_cols=34 Identities=29% Similarity=0.415 Sum_probs=31.5
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
..+|.|||.|..|...|..|++.|++|++++++.
T Consensus 21 m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 54 (310)
T 3doj_A 21 MMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTL 54 (310)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 4679999999999999999999999999999864
No 327
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=94.37 E-value=0.039 Score=52.19 Aligned_cols=35 Identities=20% Similarity=0.342 Sum_probs=32.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFL 42 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~ 42 (413)
.+++|||+|..|+-+|..|++.|.+|+++++.+..
T Consensus 177 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 211 (467)
T 1zk7_A 177 ERLAVIGSSVVALELAQAFARLGSKVTVLARNTLF 211 (467)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTT
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCcc
Confidence 57999999999999999999999999999997654
No 328
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=94.35 E-value=0.029 Score=50.01 Aligned_cols=32 Identities=25% Similarity=0.342 Sum_probs=29.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHc-----C-CcEEEEcc
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKR-----G-QKTLLLEQ 38 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~-----g-~~V~liE~ 38 (413)
+++|.|||+|..|...|..|++. | ++|+++++
T Consensus 8 ~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 8 PIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 35899999999999999999999 9 99999987
No 329
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=94.35 E-value=0.04 Score=52.14 Aligned_cols=36 Identities=19% Similarity=0.303 Sum_probs=32.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFL 42 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~ 42 (413)
..+++|||+|..|+-+|..|++.|.+|+|+|+.+..
T Consensus 174 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 209 (468)
T 2qae_A 174 PKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRC 209 (468)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCcc
Confidence 357999999999999999999999999999997654
No 330
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=94.34 E-value=0.043 Score=48.93 Aligned_cols=34 Identities=29% Similarity=0.516 Sum_probs=30.6
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCC--cEEEEccc
Q 015088 6 EKFDVIVVGAGIMGSSAAYQLAKRGQ--KTLLLEQF 39 (413)
Q Consensus 6 ~~~dvvIIGaG~aG~~~A~~L~~~g~--~V~liE~~ 39 (413)
....|.|||+|..|.++|+.|+..|+ +++++|..
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~ 39 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQGITDELVVIDVN 39 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecc
Confidence 35689999999999999999999987 89999974
No 331
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=94.31 E-value=0.03 Score=52.71 Aligned_cols=35 Identities=26% Similarity=0.206 Sum_probs=32.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHc-CC-cEEEEcccCC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKR-GQ-KTLLLEQFDF 41 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~-g~-~V~liE~~~~ 41 (413)
...|.|||+|..|+..|..|+++ |+ +|+++|++..
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 35799999999999999999999 99 9999998754
No 332
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=94.29 E-value=0.046 Score=48.92 Aligned_cols=33 Identities=21% Similarity=0.488 Sum_probs=30.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCC-cEEEEcccC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQ-KTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~-~V~liE~~~ 40 (413)
..|+|||+|..|..+|..|++.|+ +|+|+|.+.
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 579999999999999999999999 999999864
No 333
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=94.27 E-value=0.028 Score=52.72 Aligned_cols=35 Identities=20% Similarity=0.311 Sum_probs=31.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFL 42 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~ 42 (413)
..|.|||.|.+|+++|..|+++|++|++.|.+...
T Consensus 6 ~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~ 40 (439)
T 2x5o_A 6 KNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTP 40 (439)
T ss_dssp CCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSC
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCc
Confidence 46999999999999999999999999999987644
No 334
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=94.20 E-value=0.04 Score=47.21 Aligned_cols=35 Identities=31% Similarity=0.394 Sum_probs=31.5
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCC-cEEEEcccCC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQ-KTLLLEQFDF 41 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~-~V~liE~~~~ 41 (413)
..+|+|||+|-.|..+|..|++.|. +++|+|.+..
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v 66 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTV 66 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCc
Confidence 3579999999999999999999997 8999998753
No 335
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=94.18 E-value=0.039 Score=52.18 Aligned_cols=34 Identities=24% Similarity=0.175 Sum_probs=31.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDF 41 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~ 41 (413)
.+|+|||+|.+|+-+|..|++.|.+|+|++++..
T Consensus 198 k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~ 231 (464)
T 2xve_A 198 KTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTA 231 (464)
T ss_dssp SEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCC
Confidence 5799999999999999999999999999998654
No 336
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=94.15 E-value=0.045 Score=48.53 Aligned_cols=31 Identities=19% Similarity=0.359 Sum_probs=29.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEccc
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~ 39 (413)
++|+|||+|..|.+.|..|+ .|.+|++++++
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~ 33 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRR 33 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECC
Confidence 47999999999999999999 99999999985
No 337
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=94.15 E-value=0.047 Score=48.33 Aligned_cols=32 Identities=41% Similarity=0.688 Sum_probs=29.6
Q ss_pred cEEEECCCHHHHHHHHHHHHcCC--cEEEEcccC
Q 015088 9 DVIVVGAGIMGSSAAYQLAKRGQ--KTLLLEQFD 40 (413)
Q Consensus 9 dvvIIGaG~aG~~~A~~L~~~g~--~V~liE~~~ 40 (413)
.|+|||+|..|.+.|+.|+..|+ +|+++|.+.
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 59999999999999999999998 999999763
No 338
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=94.07 E-value=0.044 Score=52.21 Aligned_cols=36 Identities=31% Similarity=0.485 Sum_probs=32.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFL 42 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~ 42 (413)
..+|+|||||..|+-+|..|++.|.+|+|+++.+..
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 233 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTI 233 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEeccccc
Confidence 357999999999999999999999999999987654
No 339
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=94.07 E-value=0.047 Score=48.71 Aligned_cols=32 Identities=28% Similarity=0.485 Sum_probs=29.0
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEEccc
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~ 39 (413)
..+|.|||+|..|...|..|++.|++|+++ ++
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~ 50 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAGHEVILI-AR 50 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CC
T ss_pred CCcEEEECcCHHHHHHHHHHHHCCCeEEEE-Ec
Confidence 357999999999999999999999999999 64
No 340
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=94.05 E-value=0.053 Score=50.19 Aligned_cols=34 Identities=26% Similarity=0.396 Sum_probs=31.5
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
+.+|+|||.|..|..+|..|.+.|++|++||++.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~ 37 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDP 37 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 3579999999999999999999999999999874
No 341
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=93.95 E-value=0.054 Score=51.41 Aligned_cols=35 Identities=31% Similarity=0.359 Sum_probs=32.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFL 42 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~ 42 (413)
.+++|||+|..|+-+|..|++.|.+|+|+++.+..
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 222 (478)
T 3dk9_A 188 GRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKV 222 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred ccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCcc
Confidence 57999999999999999999999999999997654
No 342
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=93.94 E-value=0.055 Score=50.26 Aligned_cols=36 Identities=33% Similarity=0.464 Sum_probs=32.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFL 42 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~ 42 (413)
..+++|||+|..|+-+|..|.+.|.+|+++++.+..
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~ 187 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRV 187 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCch
Confidence 357999999999999999999999999999997654
No 343
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=93.94 E-value=0.065 Score=44.71 Aligned_cols=33 Identities=24% Similarity=0.237 Sum_probs=30.1
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEEccc
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~ 39 (413)
...|.|||+|..|...|..|++.|++|++++++
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~ 60 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSGFKVVVGSRN 60 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 357999999999999999999999999999985
No 344
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=93.91 E-value=0.052 Score=52.71 Aligned_cols=35 Identities=37% Similarity=0.412 Sum_probs=32.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFL 42 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~ 42 (413)
.+|+|||+|..|+-+|..|++.|.+|+++++.+..
T Consensus 152 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 186 (565)
T 3ntd_A 152 EHATVVGGGFIGLEMMESLHHLGIKTTLLELADQV 186 (565)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCcc
Confidence 47999999999999999999999999999997644
No 345
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=93.91 E-value=0.058 Score=49.93 Aligned_cols=35 Identities=26% Similarity=0.341 Sum_probs=32.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFL 42 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~ 42 (413)
.+++|||+|..|+-+|..|.+.|.+|+++++.+..
T Consensus 143 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~ 177 (404)
T 3fg2_P 143 KHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRV 177 (404)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcc
Confidence 57999999999999999999999999999997654
No 346
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=93.90 E-value=0.055 Score=48.65 Aligned_cols=33 Identities=27% Similarity=0.453 Sum_probs=30.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEEccc
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~ 39 (413)
..+|.|||+|..|...|..|++.|++|++++++
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 468999999999999999999999999999985
No 347
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=93.90 E-value=0.061 Score=50.87 Aligned_cols=33 Identities=33% Similarity=0.475 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
..|.|||+|..|...|..|+++|++|+++|++.
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 479999999999999999999999999999864
No 348
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=93.88 E-value=0.058 Score=50.86 Aligned_cols=33 Identities=30% Similarity=0.368 Sum_probs=30.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
..|.|||+|..|...|..|+++|++|+++|++.
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 469999999999999999999999999999853
No 349
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=93.87 E-value=0.06 Score=45.99 Aligned_cols=34 Identities=24% Similarity=0.351 Sum_probs=31.2
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
...|.|||+|..|...|..|++.|++|++++++.
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 4679999999999999999999999999999863
No 350
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=93.86 E-value=0.063 Score=49.11 Aligned_cols=34 Identities=21% Similarity=0.248 Sum_probs=31.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
...|+|||+|.+|+.+|..|...|.+|+++|++.
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 3579999999999999999999999999999864
No 351
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=93.81 E-value=0.044 Score=51.29 Aligned_cols=32 Identities=22% Similarity=0.395 Sum_probs=29.8
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015088 9 DVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 9 dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
.|.|||+|..|+..|..|++.|++|+++|++.
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 59999999999999999999999999999853
No 352
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=93.79 E-value=0.061 Score=47.18 Aligned_cols=33 Identities=30% Similarity=0.384 Sum_probs=30.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
..|.|||.|..|...|..|++.|++|++++++.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSP 34 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 369999999999999999999999999999864
No 353
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=93.78 E-value=0.081 Score=47.10 Aligned_cols=34 Identities=24% Similarity=0.359 Sum_probs=31.1
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
...|.|||+|..|...|..|++.|++|++++++.
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~ 63 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 63 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3679999999999999999999999999999864
No 354
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=93.76 E-value=0.051 Score=51.09 Aligned_cols=33 Identities=15% Similarity=0.053 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCc-EEEEcccC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQK-TLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~-V~liE~~~ 40 (413)
.+|+|||+|.+|+-+|..|++.|.+ |+|++++.
T Consensus 213 k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~ 246 (447)
T 2gv8_A 213 ESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGG 246 (447)
T ss_dssp CCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred CEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCC
Confidence 5799999999999999999999999 99999864
No 355
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=93.72 E-value=0.048 Score=51.53 Aligned_cols=33 Identities=15% Similarity=0.316 Sum_probs=30.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHc--CCcEEEEcccC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKR--GQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~--g~~V~liE~~~ 40 (413)
..|.|||.|..|+..|..|++. |++|+++|++.
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNE 40 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 5799999999999999999999 89999999863
No 356
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=93.63 E-value=0.021 Score=48.02 Aligned_cols=33 Identities=18% Similarity=0.178 Sum_probs=30.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEEccc
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~ 39 (413)
..+|.|||.|..|.+.|..|.++|++|+++++.
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHTTCEEEECSSG
T ss_pred CcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH
Confidence 467999999999999999999999999999984
No 357
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=93.63 E-value=0.076 Score=47.25 Aligned_cols=34 Identities=29% Similarity=0.572 Sum_probs=29.9
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCC--cEEEEccc
Q 015088 6 EKFDVIVVGAGIMGSSAAYQLAKRGQ--KTLLLEQF 39 (413)
Q Consensus 6 ~~~dvvIIGaG~aG~~~A~~L~~~g~--~V~liE~~ 39 (413)
....|+|||+|..|.+.|+.|+..|. +|+++|.+
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~ 40 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFALMNQGIADEIVLIDAN 40 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 34689999999999999999998875 79999975
No 358
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=93.63 E-value=0.057 Score=48.50 Aligned_cols=30 Identities=30% Similarity=0.477 Sum_probs=28.8
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCcEEEEcc
Q 015088 9 DVIVVGAGIMGSSAAYQLAKRGQKTLLLEQ 38 (413)
Q Consensus 9 dvvIIGaG~aG~~~A~~L~~~g~~V~liE~ 38 (413)
.|.|||+|..|...|..|++.|++|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 499999999999999999999999999998
No 359
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=93.62 E-value=0.06 Score=51.29 Aligned_cols=36 Identities=19% Similarity=0.175 Sum_probs=32.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHc---CCcEEEEcccCCC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKR---GQKTLLLEQFDFL 42 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~---g~~V~liE~~~~~ 42 (413)
..+++|||+|..|+-+|..|++. |.+|+|+|+.+..
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~ 225 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMI 225 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCc
Confidence 35799999999999999999999 9999999997654
No 360
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=93.62 E-value=0.063 Score=48.60 Aligned_cols=34 Identities=26% Similarity=0.507 Sum_probs=31.5
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCC-cEEEEcccC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQ-KTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~-~V~liE~~~ 40 (413)
..+|+|+|||.+|+.+|..|...|. +|+++|+..
T Consensus 188 d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 188 EVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred ccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 4689999999999999999999999 999999974
No 361
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=93.57 E-value=0.069 Score=48.38 Aligned_cols=34 Identities=21% Similarity=0.392 Sum_probs=31.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
..+|.|||.|..|...|..|++.|++|++++++.
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3689999999999999999999999999999863
No 362
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=93.57 E-value=0.072 Score=46.08 Aligned_cols=33 Identities=18% Similarity=0.402 Sum_probs=30.0
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCc-EEEEccc
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQK-TLLLEQF 39 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~~-V~liE~~ 39 (413)
...|.|||+|..|...|..|++.|++ |.+++++
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~ 43 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRT 43 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCC
Confidence 46899999999999999999999998 8899874
No 363
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=93.56 E-value=0.064 Score=48.64 Aligned_cols=34 Identities=24% Similarity=0.273 Sum_probs=31.2
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
...|+|||+|.+|..+|..|...|.+|+++|++.
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999999864
No 364
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=93.55 E-value=0.064 Score=48.02 Aligned_cols=33 Identities=12% Similarity=-0.050 Sum_probs=29.9
Q ss_pred ccEEEECCCHHHHH-HHHHHHHcCCcEEEEcccC
Q 015088 8 FDVIVVGAGIMGSS-AAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGaG~aG~~-~A~~L~~~g~~V~liE~~~ 40 (413)
..|.|||.|.+|++ +|..|.++|++|++.|+..
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred cEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 47999999999997 8889999999999999864
No 365
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=93.53 E-value=0.074 Score=47.21 Aligned_cols=32 Identities=31% Similarity=0.716 Sum_probs=29.1
Q ss_pred cEEEECCCHHHHHHHHHHHHc--CCcEEEEcccC
Q 015088 9 DVIVVGAGIMGSSAAYQLAKR--GQKTLLLEQFD 40 (413)
Q Consensus 9 dvvIIGaG~aG~~~A~~L~~~--g~~V~liE~~~ 40 (413)
+|+|||+|..|...|..|++. |.+|+++|.+.
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 599999999999999999985 78999999864
No 366
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=93.44 E-value=0.062 Score=47.45 Aligned_cols=33 Identities=24% Similarity=0.433 Sum_probs=30.5
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEEccc
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~ 39 (413)
...|.|||+|..|...|..|++.|++|++++++
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 36 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLM 36 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCC
Confidence 457999999999999999999999999999875
No 367
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=93.40 E-value=0.088 Score=46.88 Aligned_cols=34 Identities=15% Similarity=0.389 Sum_probs=30.9
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCC-cEEEEcccC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQ-KTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~-~V~liE~~~ 40 (413)
..+|.|||+|..|.++|+.|+..|+ +|+|+|...
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 3579999999999999999999998 999999864
No 368
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=93.34 E-value=0.078 Score=50.95 Aligned_cols=35 Identities=23% Similarity=0.321 Sum_probs=32.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFL 42 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~ 42 (413)
.+++|||+|..|+.+|..|++.|.+|+|+|+.+..
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~ 249 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPL 249 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCcc
Confidence 57999999999999999999999999999997654
No 369
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=93.34 E-value=0.078 Score=50.25 Aligned_cols=36 Identities=28% Similarity=0.399 Sum_probs=32.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFL 42 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~ 42 (413)
..+++|||+|..|+-+|..|++.|.+|+++++.+..
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 215 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKF 215 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCc
Confidence 357999999999999999999999999999997654
No 370
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=93.32 E-value=0.064 Score=47.01 Aligned_cols=32 Identities=25% Similarity=0.348 Sum_probs=30.1
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015088 9 DVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 9 dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
+|.|||.|..|...|..|++.|++|++++++.
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRAGFDVTVWNRNP 34 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHHTCCEEEECSSG
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 69999999999999999999999999999864
No 371
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=93.30 E-value=0.076 Score=48.00 Aligned_cols=35 Identities=23% Similarity=0.331 Sum_probs=31.6
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCC-cEEEEcccC
Q 015088 6 EKFDVIVVGAGIMGSSAAYQLAKRGQ-KTLLLEQFD 40 (413)
Q Consensus 6 ~~~dvvIIGaG~aG~~~A~~L~~~g~-~V~liE~~~ 40 (413)
....|+|+|||.+|..+|..|...|. +|+++|+..
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~G 226 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKG 226 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCC
Confidence 35689999999999999999999998 899999963
No 372
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=93.29 E-value=0.079 Score=46.31 Aligned_cols=35 Identities=37% Similarity=0.498 Sum_probs=31.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCC-cEEEEcccCC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQ-KTLLLEQFDF 41 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~-~V~liE~~~~ 41 (413)
...|+|||+|-.|..+|..|++.|. +++|+|.+..
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~V 71 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKV 71 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC
T ss_pred CCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCcc
Confidence 4789999999999999999999997 8999998654
No 373
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=93.29 E-value=0.1 Score=45.60 Aligned_cols=34 Identities=21% Similarity=0.338 Sum_probs=31.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDF 41 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~ 41 (413)
..|+|.|+|..|..++..|.++|++|+++.+...
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQ 37 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 4699999999999999999999999999998643
No 374
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=93.24 E-value=0.074 Score=47.26 Aligned_cols=33 Identities=18% Similarity=0.210 Sum_probs=30.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCC-cEEEEccc
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQ-KTLLLEQF 39 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~-~V~liE~~ 39 (413)
...|.|||.|..|...|..|++.|+ +|++++++
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 4679999999999999999999999 99999985
No 375
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=93.20 E-value=0.093 Score=50.07 Aligned_cols=36 Identities=22% Similarity=0.351 Sum_probs=32.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFL 42 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~ 42 (413)
..+++|||+|..|+-+|..|++.|.+|+++|+.+..
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 217 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHV 217 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcc
Confidence 357999999999999999999999999999997654
No 376
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=93.20 E-value=0.093 Score=46.55 Aligned_cols=35 Identities=23% Similarity=0.552 Sum_probs=31.9
Q ss_pred cccEEEECC-CHHHHHHHHHHHHcCCcEEEEcccCC
Q 015088 7 KFDVIVVGA-GIMGSSAAYQLAKRGQKTLLLEQFDF 41 (413)
Q Consensus 7 ~~dvvIIGa-G~aG~~~A~~L~~~g~~V~liE~~~~ 41 (413)
...|+|.|| |..|..++.+|.++|++|+++.+...
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 467999999 99999999999999999999998654
No 377
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=93.18 E-value=0.082 Score=43.90 Aligned_cols=31 Identities=26% Similarity=0.430 Sum_probs=28.9
Q ss_pred cEEEEC-CCHHHHHHHHHHHHcCCcEEEEccc
Q 015088 9 DVIVVG-AGIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 9 dvvIIG-aG~aG~~~A~~L~~~g~~V~liE~~ 39 (413)
.|.||| +|..|...|..|++.|++|++++++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~ 33 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRR 33 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 489999 9999999999999999999999874
No 378
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=93.17 E-value=0.078 Score=47.29 Aligned_cols=31 Identities=32% Similarity=0.535 Sum_probs=29.1
Q ss_pred cEEEECCCHHHHHHHHHHHHcCC--cEEEEccc
Q 015088 9 DVIVVGAGIMGSSAAYQLAKRGQ--KTLLLEQF 39 (413)
Q Consensus 9 dvvIIGaG~aG~~~A~~L~~~g~--~V~liE~~ 39 (413)
.|.|||+|..|.+.|..|++.|+ +|+++|++
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~ 34 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVD 34 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 59999999999999999999999 99999985
No 379
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=93.14 E-value=0.075 Score=47.41 Aligned_cols=33 Identities=21% Similarity=0.321 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
..|.|||.|..|...|..|++.|++|++++++.
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 579999999999999999999999999999863
No 380
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=93.13 E-value=0.097 Score=46.40 Aligned_cols=33 Identities=30% Similarity=0.515 Sum_probs=29.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCC-cEEEEcccC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQ-KTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~-~V~liE~~~ 40 (413)
..|+|||+|..|..+|+.|+..|+ +|+|+|.+.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 469999999999999999999997 999999753
No 381
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=93.11 E-value=0.037 Score=46.91 Aligned_cols=34 Identities=15% Similarity=0.087 Sum_probs=29.8
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015088 6 EKFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 6 ~~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
....|+|+|+|..|...|..|.+.|+ |+++|++.
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~ 41 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRGSEV-FVLAEDEN 41 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGG
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCe-EEEEECCH
Confidence 34579999999999999999999999 99999874
No 382
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=93.10 E-value=0.06 Score=45.11 Aligned_cols=32 Identities=19% Similarity=0.284 Sum_probs=29.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEE-Eccc
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLL-LEQF 39 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~l-iE~~ 39 (413)
..|.|||+|..|...|..|++.|++|++ ++++
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~ 56 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAAQIPAIIANSRG 56 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHTTCCEEEECTTC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCC
Confidence 5799999999999999999999999998 7765
No 383
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=93.08 E-value=0.075 Score=46.97 Aligned_cols=33 Identities=24% Similarity=0.361 Sum_probs=30.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
..|.|||.|..|...|..|++.|++|++++++.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 469999999999999999999999999999853
No 384
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=93.04 E-value=0.1 Score=46.45 Aligned_cols=35 Identities=23% Similarity=0.386 Sum_probs=31.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCC-cEEEEcccCC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQ-KTLLLEQFDF 41 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~-~V~liE~~~~ 41 (413)
...|+|||+|-.|+.+|..|++.|. +++|+|.+..
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~V 69 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTV 69 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCEe
Confidence 4689999999999999999999997 8999998754
No 385
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=93.02 E-value=0.064 Score=49.54 Aligned_cols=31 Identities=19% Similarity=0.368 Sum_probs=28.8
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015088 9 DVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 9 dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
.|.|||+|..|+..|..|++ |++|++++++.
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 49999999999999999999 99999999863
No 386
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=93.01 E-value=0.091 Score=51.28 Aligned_cols=35 Identities=26% Similarity=0.430 Sum_probs=32.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFL 42 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~ 42 (413)
.+++|||+|.+|+-+|..|++.|.+|+++++.+..
T Consensus 188 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 222 (588)
T 3ics_A 188 RHATVIGGGFIGVEMVENLRERGIEVTLVEMANQV 222 (588)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCcc
Confidence 57999999999999999999999999999987654
No 387
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=92.98 E-value=0.096 Score=46.60 Aligned_cols=33 Identities=24% Similarity=0.473 Sum_probs=29.5
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCC--cEEEEccc
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQ--KTLLLEQF 39 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~--~V~liE~~ 39 (413)
..+|+|||+|-.|.++|+.|+..|. ++.|+|..
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~ 40 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLD 40 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 4689999999999999999999885 89999864
No 388
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=92.97 E-value=0.12 Score=45.30 Aligned_cols=32 Identities=22% Similarity=0.336 Sum_probs=30.0
Q ss_pred ccEEEECC-CHHHHHHHHHHHHcCCcEEEEccc
Q 015088 8 FDVIVVGA-GIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 8 ~dvvIIGa-G~aG~~~A~~L~~~g~~V~liE~~ 39 (413)
..|.|||+ |..|...|..|++.|++|++++++
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~ 44 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIA 44 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCS
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 47999999 999999999999999999999975
No 389
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=92.96 E-value=0.033 Score=43.12 Aligned_cols=32 Identities=19% Similarity=0.251 Sum_probs=29.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEccc
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~ 39 (413)
..|+|||+|..|...|..|.+.|.+|+++++.
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~ 53 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYPQYKVTVAGRN 53 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEcCC
Confidence 47999999999999999999999999999875
No 390
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=92.87 E-value=0.12 Score=45.88 Aligned_cols=33 Identities=21% Similarity=0.298 Sum_probs=30.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCC-cEEEEcccC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQ-KTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~-~V~liE~~~ 40 (413)
..|.|||+|..|.++|+.|+..|+ +|+|+|...
T Consensus 6 ~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 6 KKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 579999999999999999999988 999999864
No 391
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=92.86 E-value=0.11 Score=44.73 Aligned_cols=33 Identities=24% Similarity=0.403 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
..++|||+|-+|.++|+.|++.|.+|+|+.|..
T Consensus 119 k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 579999999999999999999999999999864
No 392
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=92.83 E-value=0.11 Score=48.79 Aligned_cols=34 Identities=21% Similarity=0.224 Sum_probs=30.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCC-cEEEEcccCC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQ-KTLLLEQFDF 41 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~-~V~liE~~~~ 41 (413)
.+|+|||||.+|+-+|..+.+.|. +|++++++..
T Consensus 265 k~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~ 299 (456)
T 2vdc_G 265 KHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDR 299 (456)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCS
T ss_pred CEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCc
Confidence 579999999999999999999998 5999998754
No 393
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=92.78 E-value=0.1 Score=46.42 Aligned_cols=33 Identities=18% Similarity=0.113 Sum_probs=30.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHcC-CcEEEEcccC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRG-QKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g-~~V~liE~~~ 40 (413)
..|.|||.|..|...|..|++.| ++|++++++.
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 46999999999999999999999 9999999874
No 394
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=92.75 E-value=0.1 Score=49.29 Aligned_cols=33 Identities=27% Similarity=0.454 Sum_probs=31.1
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEEccc
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~ 39 (413)
+.+|.|||.|..|...|..|+++|++|++++++
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~ 47 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESRGYTVSIFNRS 47 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSS
T ss_pred CCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 468999999999999999999999999999986
No 395
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=92.72 E-value=0.1 Score=45.80 Aligned_cols=32 Identities=25% Similarity=0.349 Sum_probs=29.3
Q ss_pred cEEEECCCHHHHHHHHHHHHcCC--cEEEEcccC
Q 015088 9 DVIVVGAGIMGSSAAYQLAKRGQ--KTLLLEQFD 40 (413)
Q Consensus 9 dvvIIGaG~aG~~~A~~L~~~g~--~V~liE~~~ 40 (413)
+|+|||+|..|.++|+.|++.|+ +|+|+|...
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 59999999999999999999998 899999753
No 396
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=92.67 E-value=0.09 Score=49.80 Aligned_cols=33 Identities=21% Similarity=0.361 Sum_probs=30.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHc--CCcEEEEcccC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKR--GQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~--g~~V~liE~~~ 40 (413)
..|.|||.|..|+..|..|+++ |++|+++|++.
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 5799999999999999999998 78999999753
No 397
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=92.65 E-value=0.13 Score=48.82 Aligned_cols=34 Identities=18% Similarity=0.271 Sum_probs=31.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
...|.|||.|..|...|..|+++|++|++++++.
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~ 43 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQ 43 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4689999999999999999999999999999864
No 398
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=92.64 E-value=0.14 Score=45.44 Aligned_cols=33 Identities=33% Similarity=0.439 Sum_probs=30.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCC--cEEEEcccC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQ--KTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~--~V~liE~~~ 40 (413)
..|.|||.|..|.+.|..|.+.|+ +|+++|++.
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 579999999999999999999999 999999864
No 399
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=92.64 E-value=0.12 Score=46.18 Aligned_cols=34 Identities=21% Similarity=0.215 Sum_probs=30.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHcC----CcEEEEcccC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRG----QKTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g----~~V~liE~~~ 40 (413)
.+.|.|||+|..|...|..|++.| ++|++++++.
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc
Confidence 357999999999999999999999 7999998863
No 400
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=92.64 E-value=0.088 Score=44.11 Aligned_cols=33 Identities=21% Similarity=0.412 Sum_probs=30.3
Q ss_pred ccEEEECC-CHHHHHHHHHHHHcCCcEEEEcccC
Q 015088 8 FDVIVVGA-GIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGa-G~aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
..|+|+|| |..|..++.+|.++|++|+++.+..
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHP 38 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCG
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCc
Confidence 46999995 9999999999999999999999874
No 401
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=92.62 E-value=0.12 Score=45.05 Aligned_cols=31 Identities=32% Similarity=0.492 Sum_probs=29.0
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCcEEEEccc
Q 015088 9 DVIVVGAGIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 9 dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~ 39 (413)
.|.|||+|..|.+.|..|.+.|++|++++++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 32 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQ 32 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 4899999999999999999999999999875
No 402
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=92.60 E-value=0.12 Score=44.40 Aligned_cols=33 Identities=21% Similarity=0.289 Sum_probs=30.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHcC----CcEEEEcccC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRG----QKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g----~~V~liE~~~ 40 (413)
..|.|||+|..|.+.|..|++.| ++|++++++.
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~ 41 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSK 41 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCc
Confidence 47999999999999999999999 7999999864
No 403
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=92.60 E-value=0.12 Score=44.79 Aligned_cols=32 Identities=13% Similarity=0.216 Sum_probs=29.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEccc
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~ 39 (413)
..++|+|+|-+|..+|..|++.|.+|++++++
T Consensus 120 k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~ 151 (271)
T 1nyt_A 120 LRILLIGAGGASRGVLLPLLSLDCAVTITNRT 151 (271)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCEEEEEECC
Confidence 46999999999999999999999999999875
No 404
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=92.59 E-value=0.1 Score=46.25 Aligned_cols=31 Identities=19% Similarity=0.438 Sum_probs=29.0
Q ss_pred cEEEECCCHHHHHHHHHHHHcC--CcEEEEccc
Q 015088 9 DVIVVGAGIMGSSAAYQLAKRG--QKTLLLEQF 39 (413)
Q Consensus 9 dvvIIGaG~aG~~~A~~L~~~g--~~V~liE~~ 39 (413)
.|+|||+|..|...|..|++.| .+|+++|++
T Consensus 3 kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~ 35 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLIAQGVADDYVFIDAN 35 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCC
Confidence 6999999999999999999999 699999985
No 405
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=92.54 E-value=0.11 Score=44.72 Aligned_cols=31 Identities=26% Similarity=0.397 Sum_probs=28.9
Q ss_pred cEEEECCCHHHHHHHHHHHHcC-CcEEEEccc
Q 015088 9 DVIVVGAGIMGSSAAYQLAKRG-QKTLLLEQF 39 (413)
Q Consensus 9 dvvIIGaG~aG~~~A~~L~~~g-~~V~liE~~ 39 (413)
.|.|||+|..|...|..|++.| ++|++++++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~ 33 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRG 33 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSS
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCC
Confidence 4999999999999999999999 999999875
No 406
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=92.53 E-value=0.11 Score=45.74 Aligned_cols=34 Identities=24% Similarity=0.478 Sum_probs=30.5
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCC--cEEEEcccC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQ--KTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~--~V~liE~~~ 40 (413)
...|.|||+|..|..+|+.|+.+|+ +|+|+|...
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 3579999999999999999999998 999999865
No 407
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=92.52 E-value=0.11 Score=49.13 Aligned_cols=36 Identities=31% Similarity=0.447 Sum_probs=32.5
Q ss_pred cccEEEECCCHHHHHHHHHHHHc-CCcEEEEcccCCC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKR-GQKTLLLEQFDFL 42 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~-g~~V~liE~~~~~ 42 (413)
..+++|||+|..|+-+|..|++. |.+|+++++.+..
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~ 195 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQI 195 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcc
Confidence 35799999999999999999999 9999999997644
No 408
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=92.49 E-value=0.14 Score=48.18 Aligned_cols=34 Identities=15% Similarity=0.328 Sum_probs=31.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
+.+|.|||.|..|...|..|+++|++|++++++.
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~ 37 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 37 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999999874
No 409
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=92.46 E-value=0.14 Score=42.60 Aligned_cols=31 Identities=23% Similarity=0.357 Sum_probs=28.9
Q ss_pred cEEEECC-CHHHHHHHHHHHHcCCcEEEEccc
Q 015088 9 DVIVVGA-GIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 9 dvvIIGa-G~aG~~~A~~L~~~g~~V~liE~~ 39 (413)
.|+|+|| |..|..++.+|+++|++|+++.++
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~ 33 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRN 33 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcC
Confidence 4999996 999999999999999999999986
No 410
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=92.45 E-value=0.12 Score=45.91 Aligned_cols=35 Identities=29% Similarity=0.562 Sum_probs=30.9
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHcCC--cEEEEccc
Q 015088 5 GEKFDVIVVGAGIMGSSAAYQLAKRGQ--KTLLLEQF 39 (413)
Q Consensus 5 ~~~~dvvIIGaG~aG~~~A~~L~~~g~--~V~liE~~ 39 (413)
+++..|+|||+|-.|.+.|+.|+..++ ++.|+|..
T Consensus 3 ~~~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~ 39 (318)
T 1ez4_A 3 PNHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVV 39 (318)
T ss_dssp TTBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 345789999999999999999999886 89999974
No 411
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=92.41 E-value=0.13 Score=45.35 Aligned_cols=33 Identities=27% Similarity=0.430 Sum_probs=30.3
Q ss_pred ccEEEEC-CCHHHHHHHHHHHHcCCcEEEEcccC
Q 015088 8 FDVIVVG-AGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIG-aG~aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
..|.||| +|..|.+.|..|++.|++|++++++.
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 3799999 99999999999999999999999753
No 412
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=92.40 E-value=0.1 Score=45.45 Aligned_cols=33 Identities=15% Similarity=0.155 Sum_probs=30.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
..|+|+|+|..|..++..|.++|++|+++.++.
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred CcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 469999999999999999999999999998853
No 413
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=92.39 E-value=0.14 Score=48.46 Aligned_cols=33 Identities=15% Similarity=0.323 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
.+|.|||+|..|...|..|+++|++|++++++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~ 35 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 35 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 479999999999999999999999999999863
No 414
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=92.31 E-value=0.11 Score=45.84 Aligned_cols=32 Identities=28% Similarity=0.442 Sum_probs=29.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEccc
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~ 39 (413)
..|.|||+|..|...|..|++.|++|++++++
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 37 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRN 37 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSC
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCC
Confidence 47999999999999999999999999999875
No 415
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=92.28 E-value=0.14 Score=42.69 Aligned_cols=31 Identities=29% Similarity=0.469 Sum_probs=29.0
Q ss_pred cEEEECC-CHHHHHHHHHHHHcCCcEEEEccc
Q 015088 9 DVIVVGA-GIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 9 dvvIIGa-G~aG~~~A~~L~~~g~~V~liE~~ 39 (413)
.|+|+|| |..|..++..|+++|++|+++.++
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEec
Confidence 4999998 999999999999999999999875
No 416
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=92.27 E-value=0.13 Score=45.56 Aligned_cols=33 Identities=18% Similarity=0.374 Sum_probs=30.2
Q ss_pred ccEEEECC-CHHHHHHHHHHHHcCCcEEEEcccC
Q 015088 8 FDVIVVGA-GIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGa-G~aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
..|+|+|| |..|..++..|.++|++|+++.++.
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 45 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPN 45 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTT
T ss_pred CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCC
Confidence 46999997 9999999999999999999999864
No 417
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=92.24 E-value=0.069 Score=48.69 Aligned_cols=31 Identities=23% Similarity=0.416 Sum_probs=29.5
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCcEEEEccc
Q 015088 9 DVIVVGAGIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 9 dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~ 39 (413)
+|.|||+|..|...|..|++.|++|++++++
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~ 47 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMN 47 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 7999999999999999999999999999975
No 418
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=92.22 E-value=0.13 Score=47.45 Aligned_cols=33 Identities=24% Similarity=0.301 Sum_probs=30.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
..|+|||+|.+|+.+|..|...|.+|+++|++.
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 579999999999999999999999999999864
No 419
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=92.22 E-value=0.086 Score=47.76 Aligned_cols=34 Identities=21% Similarity=0.189 Sum_probs=30.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHcC-------CcEEEEcccCC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRG-------QKTLLLEQFDF 41 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g-------~~V~liE~~~~ 41 (413)
..|.|||+|..|.+.|..|++.| ++|++++++..
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 47999999999999999999999 89999998643
No 420
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=92.22 E-value=0.12 Score=44.24 Aligned_cols=35 Identities=31% Similarity=0.477 Sum_probs=31.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCC-cEEEEcccCC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQ-KTLLLEQFDF 41 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~-~V~liE~~~~ 41 (413)
...|+|||+|-.|..+|..|++.|. +++|+|.+..
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~v 63 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDV 63 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCBC
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCCc
Confidence 3689999999999999999999997 8999998653
No 421
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=92.19 E-value=0.2 Score=42.49 Aligned_cols=39 Identities=23% Similarity=0.273 Sum_probs=31.5
Q ss_pred CCCCCCcccEEEECC-CHHHHHHHHHHHHcCCcEEEEccc
Q 015088 1 MEFPGEKFDVIVVGA-GIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 1 m~~~~~~~dvvIIGa-G~aG~~~A~~L~~~g~~V~liE~~ 39 (413)
|.+.-....|+|.|| |..|..+|.+|+++|++|+++.++
T Consensus 1 M~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~ 40 (244)
T 3d3w_A 1 MELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRT 40 (244)
T ss_dssp CCCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CccccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 443333456888887 899999999999999999999875
No 422
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=92.19 E-value=0.15 Score=50.89 Aligned_cols=33 Identities=30% Similarity=0.414 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
..|.|||+|..|...|..|+++|++|+++|++.
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 345 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVILKEVNE 345 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCH
Confidence 469999999999999999999999999999863
No 423
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=92.16 E-value=0.13 Score=46.65 Aligned_cols=32 Identities=22% Similarity=0.413 Sum_probs=30.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEccc
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~ 39 (413)
..|+|+|+|.+|..++..|...|.+|++++++
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~ 199 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDIN 199 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 57999999999999999999999999999985
No 424
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=92.15 E-value=0.19 Score=43.87 Aligned_cols=33 Identities=15% Similarity=0.238 Sum_probs=30.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCC---cEEEEcccC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQ---KTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~---~V~liE~~~ 40 (413)
..|.|||+|..|.+.|..|.+.|+ +|++++++.
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL 39 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH
Confidence 569999999999999999999998 999999864
No 425
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=92.14 E-value=0.12 Score=47.37 Aligned_cols=34 Identities=12% Similarity=0.283 Sum_probs=30.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHcC-------CcEEEEcccCC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRG-------QKTLLLEQFDF 41 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g-------~~V~liE~~~~ 41 (413)
..|.|||+|..|.+.|..|++.| ++|++++++..
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 46999999999999999999999 99999998643
No 426
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=92.11 E-value=0.15 Score=48.18 Aligned_cols=32 Identities=38% Similarity=0.636 Sum_probs=30.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEccc
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~ 39 (413)
++|.|||+|..|...|..|+++|++|++++++
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V~v~dr~ 33 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKVAVFNRT 33 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 36999999999999999999999999999985
No 427
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=92.05 E-value=0.14 Score=45.00 Aligned_cols=32 Identities=31% Similarity=0.483 Sum_probs=29.6
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015088 9 DVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 9 dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
.|.|||+|..|...|..|++.|++|++++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 49999999999999999999999999999853
No 428
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=92.01 E-value=0.15 Score=45.24 Aligned_cols=32 Identities=28% Similarity=0.497 Sum_probs=29.3
Q ss_pred cEEEECCCHHHHHHHHHHHHcCC--cEEEEcccC
Q 015088 9 DVIVVGAGIMGSSAAYQLAKRGQ--KTLLLEQFD 40 (413)
Q Consensus 9 dvvIIGaG~aG~~~A~~L~~~g~--~V~liE~~~ 40 (413)
.|.|||+|..|.++|+.|+..|+ +++|+|...
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 35 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQDVAKEVVMVDIKD 35 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCSSEEEEECSST
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCch
Confidence 59999999999999999999887 899999864
No 429
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=91.96 E-value=0.16 Score=48.27 Aligned_cols=36 Identities=31% Similarity=0.455 Sum_probs=32.5
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFL 42 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~ 42 (413)
..+++|||+|..|+..|..|++.|.+|+++++.+..
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~ 226 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLI 226 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCcc
Confidence 357999999999999999999999999999997643
No 430
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=91.95 E-value=0.16 Score=47.92 Aligned_cols=36 Identities=19% Similarity=0.227 Sum_probs=32.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFL 42 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~ 42 (413)
..+++|||+|..|+-.|..|++.|.+|+++++.+..
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~ 205 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEI 205 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcc
Confidence 457999999999999999999999999999997643
No 431
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=91.90 E-value=0.2 Score=47.82 Aligned_cols=59 Identities=17% Similarity=0.146 Sum_probs=40.9
Q ss_pred HHHHHHC-CCEEEcCceEEEEEEecccCC-CeEEEEc--CCC-----cEEEcCEEEEcCCCC-hHHhhhhh
Q 015088 160 QTLAIKN-GAVLRDNMEVKTVLKVKDAVK-GGVTVVT--SNG-----EKFWGKKCVVTAGAW-VGKLVKRI 220 (413)
Q Consensus 160 ~~~~~~~-Gv~i~~~~~V~~i~~~~~~~~-~~~~v~~--~~g-----~~i~ad~VV~A~G~~-s~~l~~~~ 220 (413)
...++++ +++|++++.|++|.. ++++ ..+.|+. .+| .+++|+.||+|+|++ +++++...
T Consensus 233 l~~a~~~~n~~i~~~~~v~~i~~--~~~g~~~~gV~~~~~~g~~~~~~~~~A~~VIlaaGa~~sp~lL~~S 301 (507)
T 1coy_A 233 LAQAAATGKLTITTLHRVTKVAP--ATGSGYSVTMEQIDEQGNVVATKVVTADRVFFAAGSVGTSKLLVSM 301 (507)
T ss_dssp HHHHHHTTCEEEECSEEEEEEEE--CSSSSEEEEEEEECTTSCEEEEEEEEEEEEEECSHHHHHHHHHHHH
T ss_pred HHHHHhcCCcEEEeCCEEEEEEE--CCCCCEEEEEEEeCCCCcccccEEEEeCEEEEccCccCCHHHHHhc
Confidence 3344455 599999999999998 6422 3455554 255 268899999999997 55555443
No 432
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=91.85 E-value=0.17 Score=45.04 Aligned_cols=33 Identities=18% Similarity=0.300 Sum_probs=30.2
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCC--cEEEEccc
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQ--KTLLLEQF 39 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~--~V~liE~~ 39 (413)
...|.|||+|..|.++|+.|+..|+ +|+|+|..
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~ 55 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMKDLADEVALVDVM 55 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECC
Confidence 4689999999999999999999997 89999974
No 433
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=91.83 E-value=0.17 Score=45.05 Aligned_cols=34 Identities=35% Similarity=0.607 Sum_probs=30.5
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCC--cEEEEccc
Q 015088 6 EKFDVIVVGAGIMGSSAAYQLAKRGQ--KTLLLEQF 39 (413)
Q Consensus 6 ~~~dvvIIGaG~aG~~~A~~L~~~g~--~V~liE~~ 39 (413)
....|+|||+|..|.++|+.|+..|+ ++.|+|..
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~ 43 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 34689999999999999999999987 89999974
No 434
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=91.82 E-value=0.19 Score=47.45 Aligned_cols=33 Identities=24% Similarity=0.410 Sum_probs=30.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEEccc
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~ 39 (413)
+.+|.|||.|..|...|..|+++|++|++++++
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~ 37 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGYTVAIYNRT 37 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCC
Confidence 367999999999999999999999999999985
No 435
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=91.81 E-value=0.17 Score=44.47 Aligned_cols=32 Identities=28% Similarity=0.498 Sum_probs=29.5
Q ss_pred cEEEECC-CHHHHHHHHHHHHcCCcEEEEcccC
Q 015088 9 DVIVVGA-GIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 9 dvvIIGa-G~aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
+|+|.|| |..|...+.+|.++|++|+++-|+.
T Consensus 2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~ 34 (298)
T 4b4o_A 2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKP 34 (298)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 4999998 9999999999999999999998754
No 436
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=91.81 E-value=0.2 Score=41.06 Aligned_cols=33 Identities=21% Similarity=0.281 Sum_probs=30.4
Q ss_pred ccEEEECC-CHHHHHHHHHHHHcCCcEEEEcccC
Q 015088 8 FDVIVVGA-GIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGa-G~aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
..|+|+|| |..|..++.+|.++|++|+++.++.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 46999998 9999999999999999999999864
No 437
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=91.78 E-value=0.17 Score=46.46 Aligned_cols=34 Identities=21% Similarity=0.275 Sum_probs=30.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
...|+|||+|.+|+.+|..|...|.+|+++|++.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999999864
No 438
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=91.70 E-value=0.13 Score=47.69 Aligned_cols=33 Identities=27% Similarity=0.387 Sum_probs=30.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
...-|||.|..|+.+|..|+++|++|+++|++.
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~ 44 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQ 44 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CccEEEeeCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 468999999999999999999999999999874
No 439
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=91.69 E-value=0.13 Score=44.66 Aligned_cols=32 Identities=22% Similarity=0.291 Sum_probs=30.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEccc
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~ 39 (413)
..++|+|+|-+|.++|..|++.|.+|+|++++
T Consensus 120 ~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~ 151 (272)
T 1p77_A 120 QHVLILGAGGATKGVLLPLLQAQQNIVLANRT 151 (272)
T ss_dssp CEEEEECCSHHHHTTHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 57999999999999999999999999999886
No 440
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=91.68 E-value=0.18 Score=45.72 Aligned_cols=33 Identities=30% Similarity=0.449 Sum_probs=30.4
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCcEEEEcccCC
Q 015088 9 DVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDF 41 (413)
Q Consensus 9 dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~ 41 (413)
.|+|||||..|..+|+.+.+.|++|+++|.+..
T Consensus 3 ~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 3 TICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 699999999999999999999999999998654
No 441
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=91.64 E-value=0.16 Score=44.71 Aligned_cols=32 Identities=16% Similarity=0.234 Sum_probs=29.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCC-cEEEEccc
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQ-KTLLLEQF 39 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~-~V~liE~~ 39 (413)
..++|||+|-+|..+|..|++.|. +|+|+++.
T Consensus 142 ~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~ 174 (297)
T 2egg_A 142 KRILVIGAGGGARGIYFSLLSTAAERIDMANRT 174 (297)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECSS
T ss_pred CEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 579999999999999999999998 99999986
No 442
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=91.62 E-value=0.18 Score=42.45 Aligned_cols=34 Identities=24% Similarity=0.422 Sum_probs=30.8
Q ss_pred cccEEEECC-CHHHHHHHHHHHHcCCcEEEEcccC
Q 015088 7 KFDVIVVGA-GIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGa-G~aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
...|+|.|| |..|..++.+|+++|++|+++.++.
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 357999998 9999999999999999999999863
No 443
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=91.59 E-value=0.17 Score=46.15 Aligned_cols=32 Identities=25% Similarity=0.422 Sum_probs=30.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEccc
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~ 39 (413)
..|+|+|+|..|..+|..|...|.+|++++++
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~ 198 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMGAQVTILDVN 198 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 57999999999999999999999999999975
No 444
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=91.50 E-value=0.21 Score=44.48 Aligned_cols=34 Identities=21% Similarity=0.380 Sum_probs=30.5
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCC--cEEEEccc
Q 015088 6 EKFDVIVVGAGIMGSSAAYQLAKRGQ--KTLLLEQF 39 (413)
Q Consensus 6 ~~~dvvIIGaG~aG~~~A~~L~~~g~--~V~liE~~ 39 (413)
....|.|||+|..|.++|+.|+.+|. +++|+|..
T Consensus 18 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~ 53 (331)
T 4aj2_A 18 PQNKITVVGVGAVGMACAISILMKDLADELALVDVI 53 (331)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCC
Confidence 34689999999999999999999987 89999975
No 445
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=91.48 E-value=0.17 Score=47.62 Aligned_cols=33 Identities=21% Similarity=0.272 Sum_probs=30.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEEccc
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~ 39 (413)
...|+|||+|-.|...|..|.+.|.+|+|+++.
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 357999999999999999999999999999985
No 446
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=91.48 E-value=0.22 Score=42.62 Aligned_cols=32 Identities=28% Similarity=0.399 Sum_probs=29.8
Q ss_pred cEEEECCCHHHHHHHHHHHHcCC-cEEEEcccC
Q 015088 9 DVIVVGAGIMGSSAAYQLAKRGQ-KTLLLEQFD 40 (413)
Q Consensus 9 dvvIIGaG~aG~~~A~~L~~~g~-~V~liE~~~ 40 (413)
.++|||+|-+|.++++.|.+.|. +|+|++|..
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~ 142 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTI 142 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCH
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 79999999999999999999998 999999863
No 447
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=91.48 E-value=0.19 Score=43.73 Aligned_cols=31 Identities=35% Similarity=0.503 Sum_probs=28.9
Q ss_pred cEEEECCCHHHHHHHHHHHHcCC--cEEEEccc
Q 015088 9 DVIVVGAGIMGSSAAYQLAKRGQ--KTLLLEQF 39 (413)
Q Consensus 9 dvvIIGaG~aG~~~A~~L~~~g~--~V~liE~~ 39 (413)
.|.|||+|..|.+.|..|++.|+ +|++++++
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~ 35 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDIN 35 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 59999999999999999999998 89999875
No 448
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=91.45 E-value=0.25 Score=42.14 Aligned_cols=32 Identities=13% Similarity=0.174 Sum_probs=29.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCC----cEEEEccc
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQ----KTLLLEQF 39 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~----~V~liE~~ 39 (413)
..|.|||+|..|...|..|.+.|+ +|++++++
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~ 38 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLN 38 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSC
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCC
Confidence 369999999999999999999998 99999985
No 449
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=91.44 E-value=0.17 Score=45.70 Aligned_cols=35 Identities=23% Similarity=0.473 Sum_probs=31.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCC-cEEEEcccCC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQ-KTLLLEQFDF 41 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~-~V~liE~~~~ 41 (413)
...|+|||+|-.|..+|..|++.|. +++|+|.+..
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~V 153 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQI 153 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCBC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCcC
Confidence 4679999999999999999999997 8999998643
No 450
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=91.40 E-value=0.099 Score=48.36 Aligned_cols=30 Identities=23% Similarity=0.231 Sum_probs=27.9
Q ss_pred ccEEEECCCHHHHHHHHHHHH-cCCcEEEEc
Q 015088 8 FDVIVVGAGIMGSSAAYQLAK-RGQKTLLLE 37 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~-~g~~V~liE 37 (413)
++|.|||+|..|.+.|..|++ .|++|++++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 469999999999999999998 499999999
No 451
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=91.33 E-value=0.15 Score=50.80 Aligned_cols=33 Identities=39% Similarity=0.598 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
..|.|||+|..|...|..|+++|++|+++|++.
T Consensus 315 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 347 (715)
T 1wdk_A 315 KQAAVLGAGIMGGGIAYQSASKGTPILMKDINE 347 (715)
T ss_dssp SSEEEECCHHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CEEEEECCChhhHHHHHHHHhCCCEEEEEECCH
Confidence 469999999999999999999999999999863
No 452
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=91.30 E-value=0.18 Score=43.77 Aligned_cols=34 Identities=18% Similarity=0.154 Sum_probs=30.9
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCC-cEEEEcccC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQ-KTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~-~V~liE~~~ 40 (413)
...++|||+|-+|.++|+.|.+.|. +|+|+.|..
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 151 (277)
T 3don_A 117 DAYILILGAGGASKGIANELYKIVRPTLTVANRTM 151 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCG
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 3579999999999999999999998 899999864
No 453
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=91.29 E-value=0.19 Score=43.71 Aligned_cols=32 Identities=31% Similarity=0.518 Sum_probs=30.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEccc
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~ 39 (413)
..|+|||+|.+|.+.|..|.+.|.+|++++++
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~ 161 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKEGAKVFLWNRT 161 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred CEEEEECchHHHHHHHHHHHHcCCEEEEEECC
Confidence 57999999999999999999999999999986
No 454
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=91.26 E-value=0.24 Score=44.40 Aligned_cols=33 Identities=30% Similarity=0.433 Sum_probs=29.4
Q ss_pred cccEEEECC-CHHHHHHHHHHHHcCC--cEEEEccc
Q 015088 7 KFDVIVVGA-GIMGSSAAYQLAKRGQ--KTLLLEQF 39 (413)
Q Consensus 7 ~~dvvIIGa-G~aG~~~A~~L~~~g~--~V~liE~~ 39 (413)
..+|+|||+ |..|.++|+.|+..|. +|+|+|..
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~ 43 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPF 43 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSC
T ss_pred CCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 357999998 9999999999999985 89999975
No 455
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=91.18 E-value=0.21 Score=47.97 Aligned_cols=35 Identities=23% Similarity=0.386 Sum_probs=31.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCC-cEEEEcccCC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQ-KTLLLEQFDF 41 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~-~V~liE~~~~ 41 (413)
...|+|||+|-.|+.+|..|++.|. +++|+|.+..
T Consensus 326 ~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~V 361 (615)
T 4gsl_A 326 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTV 361 (615)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCC
Confidence 4689999999999999999999997 8999998754
No 456
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=91.15 E-value=0.17 Score=43.52 Aligned_cols=32 Identities=16% Similarity=0.272 Sum_probs=29.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEccc
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~ 39 (413)
..|.|||+|..|...|..|.+.|++|.+++++
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~ 35 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSS 35 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSS
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEECCC
Confidence 47999999999999999999999999999875
No 457
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=91.08 E-value=0.17 Score=44.15 Aligned_cols=30 Identities=33% Similarity=0.429 Sum_probs=28.2
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCcEEEEccc
Q 015088 9 DVIVVGAGIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 9 dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~ 39 (413)
.|.|||+|..|...|..|++ |++|++++++
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~ 32 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWNRT 32 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSCEEEECSS
T ss_pred eEEEEcccHHHHHHHHHHhC-CCeEEEEeCC
Confidence 59999999999999999999 9999999875
No 458
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=91.05 E-value=0.28 Score=41.52 Aligned_cols=33 Identities=21% Similarity=0.324 Sum_probs=29.3
Q ss_pred cccEEEECC-CHHHHHHHHHHHHcCCcEEEEccc
Q 015088 7 KFDVIVVGA-GIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 7 ~~dvvIIGa-G~aG~~~A~~L~~~g~~V~liE~~ 39 (413)
...++|.|| |..|..+|.+|+++|++|++++++
T Consensus 7 ~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~ 40 (244)
T 1cyd_A 7 GLRALVTGAGKGIGRDTVKALHASGAKVVAVTRT 40 (244)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 346888887 899999999999999999999875
No 459
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=90.95 E-value=0.19 Score=43.27 Aligned_cols=30 Identities=23% Similarity=0.295 Sum_probs=27.7
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCcEEEEcc
Q 015088 9 DVIVVGAGIMGSSAAYQLAKRGQKTLLLEQ 38 (413)
Q Consensus 9 dvvIIGaG~aG~~~A~~L~~~g~~V~liE~ 38 (413)
.|.|||+|..|...|..|++.|++|+++++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 489999999999999999999999999765
No 460
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=90.92 E-value=0.17 Score=45.33 Aligned_cols=33 Identities=33% Similarity=0.359 Sum_probs=29.3
Q ss_pred cccEEEECC-CHHHHHHHHHHHHcCC-------cEEEEccc
Q 015088 7 KFDVIVVGA-GIMGSSAAYQLAKRGQ-------KTLLLEQF 39 (413)
Q Consensus 7 ~~dvvIIGa-G~aG~~~A~~L~~~g~-------~V~liE~~ 39 (413)
...|+|+|| |..|..++..|.+.|+ +|+++|..
T Consensus 4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~ 44 (327)
T 1y7t_A 4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIP 44 (327)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCG
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCC
Confidence 357999998 9999999999999886 89999875
No 461
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=90.86 E-value=0.22 Score=45.50 Aligned_cols=33 Identities=33% Similarity=0.407 Sum_probs=30.2
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEEccc
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~ 39 (413)
...|+|||+|.+|..+|..|...|.+|+++|++
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~ 200 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGMGATVTVLDIN 200 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 357999999999999999999999999999975
No 462
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=90.83 E-value=0.22 Score=47.86 Aligned_cols=35 Identities=23% Similarity=0.386 Sum_probs=31.5
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCC-cEEEEcccCC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQ-KTLLLEQFDF 41 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~-~V~liE~~~~ 41 (413)
...|+|||+|-.|..+|..|++.|. +++|+|.+..
T Consensus 327 ~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D~V 362 (598)
T 3vh1_A 327 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTV 362 (598)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCCEEEEECCSBC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEECCCcc
Confidence 4689999999999999999999998 8999998654
No 463
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=90.82 E-value=0.29 Score=42.10 Aligned_cols=40 Identities=20% Similarity=0.299 Sum_probs=31.0
Q ss_pred CCCCCCcccEEEECC-CH--HHHHHHHHHHHcCCcEEEEcccC
Q 015088 1 MEFPGEKFDVIVVGA-GI--MGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 1 m~~~~~~~dvvIIGa-G~--aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
|.+.-....++|.|| |. .|..+|..|+++|.+|+++.+..
T Consensus 1 M~~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~ 43 (266)
T 3oig_A 1 MNFSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGE 43 (266)
T ss_dssp CCSCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CccccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCch
Confidence 443333456889997 45 89999999999999999998753
No 464
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=90.82 E-value=0.27 Score=44.11 Aligned_cols=32 Identities=22% Similarity=0.262 Sum_probs=29.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEccc
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~ 39 (413)
..|.|||.|..|.+.|..|++.|++|++.++.
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~ 48 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSGVDVTVGLRS 48 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECCT
T ss_pred CEEEEECchHHHHHHHHHHHHCcCEEEEEECC
Confidence 46999999999999999999999999999875
No 465
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=90.79 E-value=0.17 Score=45.25 Aligned_cols=33 Identities=30% Similarity=0.309 Sum_probs=29.5
Q ss_pred cccEEEECC-CHHHHHHHHHHHHcCC-------cEEEEccc
Q 015088 7 KFDVIVVGA-GIMGSSAAYQLAKRGQ-------KTLLLEQF 39 (413)
Q Consensus 7 ~~dvvIIGa-G~aG~~~A~~L~~~g~-------~V~liE~~ 39 (413)
..+|+|||| |..|...++.|...|+ +|.++|..
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~ 45 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIP 45 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCS
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCC
Confidence 468999998 9999999999999885 79999875
No 466
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=90.79 E-value=0.14 Score=44.94 Aligned_cols=32 Identities=31% Similarity=0.521 Sum_probs=29.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
..|.|||+|..|...|..|++.|++|++++ +.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~ 35 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGHQLHVTT-IG 35 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CH
Confidence 469999999999999999999999999998 53
No 467
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=90.73 E-value=0.27 Score=43.54 Aligned_cols=33 Identities=18% Similarity=0.221 Sum_probs=30.0
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCC-cEEEEccc
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQ-KTLLLEQF 39 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~-~V~liE~~ 39 (413)
...++|+|+|-+|.++|+.|++.|. +|+|+.|.
T Consensus 154 gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 154 GKKMTICGAGGAATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CCEEEEECCChHHHHHHHHHHHCCCCEEEEEECC
Confidence 3579999999999999999999998 89999886
No 468
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=90.72 E-value=0.19 Score=50.03 Aligned_cols=33 Identities=30% Similarity=0.368 Sum_probs=30.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
..|.|||+|..|...|+.++..|++|+|+|...
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~ 349 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARVGISVVAVESDP 349 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred cEEEEEcccHHHHHHHHHHHhCCCchhcccchH
Confidence 579999999999999999999999999999764
No 469
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=90.72 E-value=0.28 Score=42.76 Aligned_cols=33 Identities=33% Similarity=0.416 Sum_probs=29.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCC-cEEEEccc
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQ-KTLLLEQF 39 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~-~V~liE~~ 39 (413)
...++|+|+|-+|.++|+.|++.|. +|+|+.|.
T Consensus 127 ~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~ 160 (283)
T 3jyo_A 127 LDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLD 160 (283)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECC
Confidence 3579999999999999999999998 69999875
No 470
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=90.66 E-value=0.18 Score=44.45 Aligned_cols=33 Identities=24% Similarity=0.282 Sum_probs=29.9
Q ss_pred cccEEEECCC-HHHHHHHHHHHHcCCcEEEEccc
Q 015088 7 KFDVIVVGAG-IMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 7 ~~dvvIIGaG-~aG~~~A~~L~~~g~~V~liE~~ 39 (413)
..+++|||+| +.|..+|..|...|.+|++++++
T Consensus 177 gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~ 210 (320)
T 1edz_A 177 GKKCIVINRSEIVGRPLAALLANDGATVYSVDVN 210 (320)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred CCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCc
Confidence 4689999999 67999999999999999999875
No 471
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=90.63 E-value=0.3 Score=43.65 Aligned_cols=35 Identities=26% Similarity=0.441 Sum_probs=30.8
Q ss_pred cccEEEECC-CHHHHHHHHHHHHcCCcEEEEcccCC
Q 015088 7 KFDVIVVGA-GIMGSSAAYQLAKRGQKTLLLEQFDF 41 (413)
Q Consensus 7 ~~dvvIIGa-G~aG~~~A~~L~~~g~~V~liE~~~~ 41 (413)
...|+|.|| |..|..++.+|+++|++|+++++...
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 40 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVN 40 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSS
T ss_pred CcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCc
Confidence 457999985 99999999999999999999998643
No 472
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=90.61 E-value=0.25 Score=47.89 Aligned_cols=35 Identities=20% Similarity=0.332 Sum_probs=32.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEcccCCC
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDFL 42 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~~ 42 (413)
.+++|+|+|-.|...|..|.+.|++|++||++...
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~ 383 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESP 383 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHH
Confidence 67999999999999999999999999999998654
No 473
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=90.54 E-value=0.32 Score=43.42 Aligned_cols=33 Identities=30% Similarity=0.265 Sum_probs=29.9
Q ss_pred cccEEEECC-CHHHHHHHHHHHHcCCcEEEEccc
Q 015088 7 KFDVIVVGA-GIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 7 ~~dvvIIGa-G~aG~~~A~~L~~~g~~V~liE~~ 39 (413)
...|+|.|| |..|..++.+|.++|++|+++.+.
T Consensus 11 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~ 44 (342)
T 1y1p_A 11 GSLVLVTGANGFVASHVVEQLLEHGYKVRGTARS 44 (342)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 357999998 999999999999999999999874
No 474
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=90.54 E-value=0.3 Score=42.07 Aligned_cols=31 Identities=26% Similarity=0.469 Sum_probs=29.3
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCcEEEEccc
Q 015088 9 DVIVVGAGIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 9 dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~ 39 (413)
.++|||+|-+|...|..|.+.|.+|+++++.
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~ 148 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRT 148 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 7999999999999999999999999999975
No 475
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=90.49 E-value=0.17 Score=50.80 Aligned_cols=33 Identities=21% Similarity=0.316 Sum_probs=30.9
Q ss_pred ccEEEEC--CCHHHHHHHHHHHHcCCcEEEEcccC
Q 015088 8 FDVIVVG--AGIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 8 ~dvvIIG--aG~aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
.+|+||| ||..|+-+|..|++.|.+|+|+++.+
T Consensus 529 k~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 529 KRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 4799998 99999999999999999999999876
No 476
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=90.47 E-value=0.058 Score=50.42 Aligned_cols=32 Identities=31% Similarity=0.483 Sum_probs=29.2
Q ss_pred cEEEECCCHHHHHHHHHHHHcC--CcEEEEcccC
Q 015088 9 DVIVVGAGIMGSSAAYQLAKRG--QKTLLLEQFD 40 (413)
Q Consensus 9 dvvIIGaG~aG~~~A~~L~~~g--~~V~liE~~~ 40 (413)
+|+|||||++|+++|.+|++.+ ++|+|||+++
T Consensus 4 ~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~ 37 (430)
T 3hyw_A 4 HVVVIGGGVGGIATAYNLRNLMPDLKITLISDRP 37 (430)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSS
T ss_pred cEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCC
Confidence 6999999999999999999875 7999999864
No 477
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=90.47 E-value=0.3 Score=42.21 Aligned_cols=33 Identities=18% Similarity=0.251 Sum_probs=29.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCC-cEEEEccc
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQ-KTLLLEQF 39 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~-~V~liE~~ 39 (413)
...++|+|+|-+|.++|+.|++.|. +|+|+.|.
T Consensus 120 ~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~ 153 (272)
T 3pwz_A 120 NRRVLLLGAGGAVRGALLPFLQAGPSELVIANRD 153 (272)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 3579999999999999999999996 89999885
No 478
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=90.37 E-value=0.19 Score=44.19 Aligned_cols=33 Identities=18% Similarity=0.309 Sum_probs=27.4
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCcEEEEcccCC
Q 015088 9 DVIVVGAGIMGSSAAYQLAKRGQKTLLLEQFDF 41 (413)
Q Consensus 9 dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~~~ 41 (413)
+|-+||-|..|...|..|.++|++|+++|++..
T Consensus 7 kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~ 39 (297)
T 4gbj_A 7 KIAFLGLGNLGTPIAEILLEAGYELVVWNRTAS 39 (297)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEC-----
T ss_pred cEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 699999999999999999999999999998653
No 479
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=90.33 E-value=0.25 Score=42.97 Aligned_cols=34 Identities=12% Similarity=0.084 Sum_probs=30.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCC-cEEEEcccC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQ-KTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~-~V~liE~~~ 40 (413)
...++|+|+|-+|.++|+.|.+.|. +|+|+.|..
T Consensus 122 ~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~ 156 (282)
T 3fbt_A 122 NNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNP 156 (282)
T ss_dssp TSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCH
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 3579999999999999999999998 899998863
No 480
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=90.31 E-value=0.27 Score=44.22 Aligned_cols=35 Identities=23% Similarity=0.271 Sum_probs=31.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCC-cEEEEcccCC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQ-KTLLLEQFDF 41 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~-~V~liE~~~~ 41 (413)
...|+|||+|-.|..+|..|++.|. +++|+|.+..
T Consensus 36 ~~~VlivG~GGlG~~ia~~La~~Gvg~itlvD~d~V 71 (346)
T 1y8q_A 36 ASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQV 71 (346)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEECCCc
Confidence 4689999999999999999999998 8999997654
No 481
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=90.25 E-value=0.28 Score=45.53 Aligned_cols=35 Identities=26% Similarity=0.376 Sum_probs=31.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCC-cEEEEcccCC
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQ-KTLLLEQFDF 41 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~-~V~liE~~~~ 41 (413)
..+|+|||+|-.|..+|..|++.|. +++|+|.+..
T Consensus 40 ~~~VlvvG~GGlGs~va~~La~aGvg~i~ivD~D~V 75 (434)
T 1tt5_B 40 TCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTI 75 (434)
T ss_dssp TCCEEEECSSTHHHHHHHHHHHTTCCCEEEEECCBC
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCCEEEEEcCCEe
Confidence 4689999999999999999999998 8999997643
No 482
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=90.23 E-value=0.39 Score=39.91 Aligned_cols=32 Identities=16% Similarity=0.166 Sum_probs=28.7
Q ss_pred cEEEECC-CHHHHHHHHHHH-HcCCcEEEEcccC
Q 015088 9 DVIVVGA-GIMGSSAAYQLA-KRGQKTLLLEQFD 40 (413)
Q Consensus 9 dvvIIGa-G~aG~~~A~~L~-~~g~~V~liE~~~ 40 (413)
.|+|+|| |..|..+|..|+ +.|++|+++.++.
T Consensus 7 ~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~ 40 (221)
T 3r6d_A 7 YITILGAAGQIAQXLTATLLTYTDMHITLYGRQL 40 (221)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSH
T ss_pred EEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCc
Confidence 3999995 999999999999 8999999999863
No 483
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=90.22 E-value=0.3 Score=43.14 Aligned_cols=32 Identities=31% Similarity=0.488 Sum_probs=28.7
Q ss_pred cEEEECCCHHHHHHHHHHHHcCC-cEEEEcccC
Q 015088 9 DVIVVGAGIMGSSAAYQLAKRGQ-KTLLLEQFD 40 (413)
Q Consensus 9 dvvIIGaG~aG~~~A~~L~~~g~-~V~liE~~~ 40 (413)
.|.|||+|..|.+.|+.|+..++ +|.|+|...
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~ 33 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTP 33 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSST
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCCh
Confidence 48999999999999999998888 699999863
No 484
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=90.18 E-value=0.31 Score=43.72 Aligned_cols=36 Identities=17% Similarity=0.254 Sum_probs=30.6
Q ss_pred CcccEEEECC-CHHHHHHHHHHHHcCCcEEEEcccCC
Q 015088 6 EKFDVIVVGA-GIMGSSAAYQLAKRGQKTLLLEQFDF 41 (413)
Q Consensus 6 ~~~dvvIIGa-G~aG~~~A~~L~~~g~~V~liE~~~~ 41 (413)
....|+|.|| |..|..++..|.++|++|+++.+...
T Consensus 18 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 54 (347)
T 4id9_A 18 GSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPS 54 (347)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCC
Confidence 3468999998 99999999999999999999998653
No 485
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=90.17 E-value=0.31 Score=43.40 Aligned_cols=35 Identities=34% Similarity=0.580 Sum_probs=30.6
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHcCC--cEEEEccc
Q 015088 5 GEKFDVIVVGAGIMGSSAAYQLAKRGQ--KTLLLEQF 39 (413)
Q Consensus 5 ~~~~dvvIIGaG~aG~~~A~~L~~~g~--~V~liE~~ 39 (413)
+++.+|+|||+|-.|.++|+.|+..++ ++.|+|..
T Consensus 7 ~~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~ 43 (326)
T 2zqz_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 345789999999999999999998876 89999974
No 486
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=90.17 E-value=0.26 Score=43.12 Aligned_cols=32 Identities=25% Similarity=0.349 Sum_probs=28.4
Q ss_pred cEEEECCCHHHHHHHHHHHHcCC--cEEEEcccC
Q 015088 9 DVIVVGAGIMGSSAAYQLAKRGQ--KTLLLEQFD 40 (413)
Q Consensus 9 dvvIIGaG~aG~~~A~~L~~~g~--~V~liE~~~ 40 (413)
+|.|||+|-.|.++|+.|..++. ++.|+|...
T Consensus 2 KV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~ 35 (294)
T 2x0j_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence 59999999999999999998875 799999753
No 487
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=90.05 E-value=0.31 Score=41.23 Aligned_cols=41 Identities=24% Similarity=0.331 Sum_probs=30.0
Q ss_pred CCCCCCcccEEEECC-CHHHHHHHHHHHHcCCcEEEEcccCC
Q 015088 1 MEFPGEKFDVIVVGA-GIMGSSAAYQLAKRGQKTLLLEQFDF 41 (413)
Q Consensus 1 m~~~~~~~dvvIIGa-G~aG~~~A~~L~~~g~~V~liE~~~~ 41 (413)
|..+.....++|.|| |-.|..+|.+|+++|++|++++++..
T Consensus 1 M~~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~ 42 (241)
T 1dhr_A 1 MAASGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVEN 42 (241)
T ss_dssp -----CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCC
T ss_pred CCccCCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChh
Confidence 433333446888875 68899999999999999999998753
No 488
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=89.97 E-value=0.21 Score=43.64 Aligned_cols=31 Identities=23% Similarity=0.460 Sum_probs=28.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEccc
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~ 39 (413)
..++|+|+|-+|.++|..|++.| +|++++++
T Consensus 129 k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~ 159 (287)
T 1nvt_A 129 KNIVIYGAGGAARAVAFELAKDN-NIIIANRT 159 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHTSSS-EEEEECSS
T ss_pred CEEEEECchHHHHHHHHHHHHCC-CEEEEECC
Confidence 46999999999999999999999 99999874
No 489
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=89.91 E-value=0.31 Score=42.36 Aligned_cols=33 Identities=12% Similarity=0.180 Sum_probs=29.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCC-cEEEEccc
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQ-KTLLLEQF 39 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~-~V~liE~~ 39 (413)
...++|+|+|-+|.++|+.|++.|. +|+|+.|.
T Consensus 126 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~ 159 (281)
T 3o8q_A 126 GATILLIGAGGAARGVLKPLLDQQPASITVTNRT 159 (281)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESS
T ss_pred CCEEEEECchHHHHHHHHHHHhcCCCeEEEEECC
Confidence 3579999999999999999999996 89999885
No 490
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=89.90 E-value=0.31 Score=45.63 Aligned_cols=32 Identities=25% Similarity=0.324 Sum_probs=29.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEEccc
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~ 39 (413)
..++|+|+|..|..+|..|+..|.+|++.|++
T Consensus 266 KtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~ 297 (488)
T 3ond_A 266 KVAVVAGYGDVGKGCAAALKQAGARVIVTEID 297 (488)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCC
Confidence 56999999999999999999999999999875
No 491
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=89.80 E-value=0.29 Score=42.75 Aligned_cols=32 Identities=19% Similarity=0.324 Sum_probs=28.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHc--CCcEEEEccc
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKR--GQKTLLLEQF 39 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~--g~~V~liE~~ 39 (413)
..|.|||+|..|.+.|..|++. |.+|++++++
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~ 40 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRS 40 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSS
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCC
Confidence 4699999999999999999988 6789999875
No 492
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=89.78 E-value=0.41 Score=40.96 Aligned_cols=35 Identities=29% Similarity=0.264 Sum_probs=29.3
Q ss_pred cccEEEECC-CHHHHHHHHHHHHcCCcEEEEcccCC
Q 015088 7 KFDVIVVGA-GIMGSSAAYQLAKRGQKTLLLEQFDF 41 (413)
Q Consensus 7 ~~dvvIIGa-G~aG~~~A~~L~~~g~~V~liE~~~~ 41 (413)
...++|.|| |-.|..+|.+|+++|.+|++++++..
T Consensus 7 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~ 42 (257)
T 3tpc_A 7 SRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPP 42 (257)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChH
Confidence 345777776 68899999999999999999998653
No 493
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=89.77 E-value=0.31 Score=42.18 Aligned_cols=32 Identities=25% Similarity=0.291 Sum_probs=29.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCC-cEEEEccc
Q 015088 8 FDVIVVGAGIMGSSAAYQLAKRGQ-KTLLLEQF 39 (413)
Q Consensus 8 ~dvvIIGaG~aG~~~A~~L~~~g~-~V~liE~~ 39 (413)
..++|||+|-+|.++++.|.+.|. +|+|+.|.
T Consensus 120 ~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt 152 (271)
T 1npy_A 120 AKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARN 152 (271)
T ss_dssp SCEEEECSSTTHHHHHHHHHHTTCCCEEEECSC
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 579999999999999999999997 89999886
No 494
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=89.76 E-value=0.32 Score=42.80 Aligned_cols=33 Identities=24% Similarity=0.237 Sum_probs=30.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEEccc
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~ 39 (413)
...|.|||+|.+|..+|..|...|.+|+++++.
T Consensus 157 g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~ 189 (300)
T 2rir_A 157 GSQVAVLGLGRTGMTIARTFAALGANVKVGARS 189 (300)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCEEEEEECC
Confidence 357999999999999999999999999999985
No 495
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=89.70 E-value=0.44 Score=40.98 Aligned_cols=39 Identities=26% Similarity=0.204 Sum_probs=30.0
Q ss_pred CCCCCCcccEEEECC-CHHHHHHHHHHHHcCCcEEEEccc
Q 015088 1 MEFPGEKFDVIVVGA-GIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 1 m~~~~~~~dvvIIGa-G~aG~~~A~~L~~~g~~V~liE~~ 39 (413)
|..|-....++|.|| |-.|..+|..|+++|++|++++++
T Consensus 1 M~~m~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 40 (267)
T 2gdz_A 1 MAHMVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWN 40 (267)
T ss_dssp -CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCcccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECC
Confidence 443323345888876 788999999999999999999875
No 496
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=89.68 E-value=0.37 Score=42.57 Aligned_cols=33 Identities=21% Similarity=0.258 Sum_probs=29.9
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCC-cEEEEccc
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQ-KTLLLEQF 39 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~-~V~liE~~ 39 (413)
...++|+|+|-+|.++|+.|++.|. +|+|+.|.
T Consensus 148 gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt 181 (312)
T 3t4e_A 148 GKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRK 181 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 3579999999999999999999998 79999885
No 497
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=89.64 E-value=0.25 Score=43.81 Aligned_cols=32 Identities=25% Similarity=0.347 Sum_probs=28.9
Q ss_pred cEEEECC-CHHHHHHHHHHHHcC--CcEEEEcccC
Q 015088 9 DVIVVGA-GIMGSSAAYQLAKRG--QKTLLLEQFD 40 (413)
Q Consensus 9 dvvIIGa-G~aG~~~A~~L~~~g--~~V~liE~~~ 40 (413)
+|+|||+ |..|..+|+.|++.| .+|+++|...
T Consensus 2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~ 36 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH 36 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc
Confidence 5999998 999999999999888 6899999864
No 498
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=89.61 E-value=0.34 Score=42.50 Aligned_cols=33 Identities=30% Similarity=0.322 Sum_probs=30.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEEccc
Q 015088 7 KFDVIVVGAGIMGSSAAYQLAKRGQKTLLLEQF 39 (413)
Q Consensus 7 ~~dvvIIGaG~aG~~~A~~L~~~g~~V~liE~~ 39 (413)
...|.|||.|.+|..+|..|...|.+|+++++.
T Consensus 155 g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~ 187 (293)
T 3d4o_A 155 GANVAVLGLGRVGMSVARKFAALGAKVKVGARE 187 (293)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECC
Confidence 357999999999999999999999999999985
No 499
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=89.59 E-value=0.44 Score=43.10 Aligned_cols=34 Identities=24% Similarity=0.620 Sum_probs=30.0
Q ss_pred cccEEEECC-CHHHHHHHHHHHH--cCCcEEEEcccC
Q 015088 7 KFDVIVVGA-GIMGSSAAYQLAK--RGQKTLLLEQFD 40 (413)
Q Consensus 7 ~~dvvIIGa-G~aG~~~A~~L~~--~g~~V~liE~~~ 40 (413)
...|+|.|| |..|..++..|++ .|++|+++++..
T Consensus 10 ~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~ 46 (362)
T 3sxp_A 10 NQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFR 46 (362)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCC
Confidence 457999976 9999999999999 899999999854
No 500
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=89.48 E-value=0.36 Score=41.12 Aligned_cols=40 Identities=28% Similarity=0.339 Sum_probs=29.4
Q ss_pred CCCCCCcccEEEECC-CHHHHHHHHHHHHcCCcEEEEcccC
Q 015088 1 MEFPGEKFDVIVVGA-GIMGSSAAYQLAKRGQKTLLLEQFD 40 (413)
Q Consensus 1 m~~~~~~~dvvIIGa-G~aG~~~A~~L~~~g~~V~liE~~~ 40 (413)
|.+.....-++|.|| |-.|..+|..|+++|.+|++++++.
T Consensus 1 M~~~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~ 41 (250)
T 3nyw_A 1 MSLEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSK 41 (250)
T ss_dssp ----CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCH
T ss_pred CcccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 443333345777776 7889999999999999999998853
Done!