BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015089
(413 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5JVF3|PCID2_HUMAN PCI domain-containing protein 2 OS=Homo sapiens GN=PCID2 PE=1 SV=2
Length = 399
Score = 260 bits (664), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 150/411 (36%), Positives = 249/411 (60%), Gaps = 28/411 (6%)
Query: 9 AHRRITDYLNRFSDAVSSQDVVSLKQLLSFSSNSPSLLSLADSLNVFQDANRLIKQSDNY 68
AH I YL + +A+ S+D S +L+SF P + + + ++ + + +
Sbjct: 2 AHITINQYLQQVYEAIDSRDGASCAELVSF--KHPHVANPRLQMASPEEKCQQVLEP--- 56
Query: 69 SPFADITVPLFRSLQHYRTGN--LVDAYLAFEKSANAFIQEFR-NWESAWALEALYVIAY 125
P+ ++ R Y GN ++AY +F++ F+ + E WAL +Y +A
Sbjct: 57 -PYDEMFAAHLRCT--YAVGNHDFIEAYKCQTVIVQSFLRAFQAHKEENWALPVMYAVAL 113
Query: 126 EIRVLAERADRELASNGKSP--EKLKAAGSFLMKVFGVLAG------KGSKRVGALYLTC 177
++RV A AD++L GKS + L+ A LM F V A + SK+ G L+L
Sbjct: 114 DLRVFANNADQQLVKKGKSKVGDMLEKAAELLMSCFRVCASDTRAGIEDSKKWGMLFLVN 173
Query: 178 QLFKIYFKLGTVHLCRSVIRSIETARIFDFEEFPKRDKVTYMYYTGRLEVFNENFPAADQ 237
QLFKIYFK+ +HLC+ +IR+I+++ + D ++ +VTY YY GR +F+ +F A++
Sbjct: 174 QLFKIYFKINKLHLCKPLIRAIDSSNLKD--DYSTAQRVTYKYYVGRKAMFDSDFKQAEE 231
Query: 238 KLSYALINCNPQSEANIRMILKYLIPVKLSIGILPKDWLLEKYNLVEYSNIVQALRRGDL 297
LS+A +C+ S+ N RMIL YL+PVK+ +G +P LL+KY+L++++ + +A+ G+L
Sbjct: 232 YLSFAFEHCHRSSQKNKRMILIYLLPVKMLLGHMPTVELLKKYHLMQFAEVTRAVSEGNL 291
Query: 298 RLLRHALEEHEDQFLRSGVYLVLEKLELQVYQRLFKKIYIIQKQKDPSKAHQMKLDVIVK 357
LL AL +HE F+R G++L+LEKL++ Y+ LFKK+Y++ K HQ+ LD +
Sbjct: 292 LLLHEALAKHEAFFIRCGIFLILEKLKIITYRNLFKKVYLL------LKTHQLSLDAFLV 345
Query: 358 ALKWLEM-DMDVDEVECIVAILIHKNLVKGYFAHKSKVVVLSKQDPFPKLN 407
ALK++++ D+D+DEV+CI+A LI+ VKGY +H+ + +V+SKQ+PFP L+
Sbjct: 346 ALKFMQVEDVDIDEVQCILANLIYMGHVKGYISHQHQKLVVSKQNPFPPLS 396
>sp|Q5FWP8|PCID2_XENLA PCI domain-containing protein 2 OS=Xenopus laevis GN=pcid2 PE=2
SV=1
Length = 399
Score = 256 bits (655), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 146/409 (35%), Positives = 244/409 (59%), Gaps = 24/409 (5%)
Query: 9 AHRRITDYLNRFSDAVSSQDVVSLKQLLSFSSNSPSLLSLADSLNVFQDANRLIKQSDNY 68
AH I YL + +A+ S+D + L+SF P + + L ++ + + +
Sbjct: 2 AHITINQYLQQVQEAIDSKDGFNCADLVSF--KHPHVANARLQLLSPEEKCQQVLEP--- 56
Query: 69 SPFADITVPLFRSLQHYRTGNLVDAYLAFEKSANAFIQEFR-NWESAWALEALYVIAYEI 127
P+ ++ R + + V+AY +F++ F+ + E WAL +Y I ++
Sbjct: 57 -PYDEMFAAHLRCINAASNHDFVEAYKYQTLVVQSFLKSFQAHKEENWALPIMYSITLDL 115
Query: 128 RVLAERADRELASNGKSP--EKLKAAGSFLMKVFGVLAG------KGSKRVGALYLTCQL 179
R+ A AD++L GK + L+ A LM F V A + SK+ G L+L QL
Sbjct: 116 RIFANNADQQLVKKGKGKVGDMLEKAAEILMSCFRVCASDTRAAFEDSKKWGMLFLVNQL 175
Query: 180 FKIYFKLGTVHLCRSVIRSIETARIFDFEEFPKRDKVTYMYYTGRLEVFNENFPAADQKL 239
FKIYFK+ +HLC+ +IR+I+++ EE+ +VT+ YY GR +F+ +F A++ L
Sbjct: 176 FKIYFKISKLHLCKPLIRAIDSSNFK--EEYTMAQRVTFKYYVGRKSMFDSDFKKAEEYL 233
Query: 240 SYALINCNPQSEANIRMILKYLIPVKLSIGILPKDWLLEKYNLVEYSNIVQALRRGDLRL 299
S+A +C+ S+ N RMIL YL+PVK+ +G +P LL+KY+L++++ + +A+ G+L L
Sbjct: 234 SFAFEHCHRSSQKNKRMILIYLLPVKMLLGHMPTIHLLKKYDLMQFAEVTKAVSEGNLLL 293
Query: 300 LRHALEEHEDQFLRSGVYLVLEKLELQVYQRLFKKIYIIQKQKDPSKAHQMKLDVIVKAL 359
L AL +HE F+R G++L+LEKL++ Y+ LFKK+Y++ K HQ+ LD + AL
Sbjct: 294 LTEALTKHETFFIRCGIFLILEKLKIISYRNLFKKVYLL------LKTHQLSLDAFLVAL 347
Query: 360 KWLEM-DMDVDEVECIVAILIHKNLVKGYFAHKSKVVVLSKQDPFPKLN 407
K++E+ D+D+DEV+CI+A LI+ +KGY +H+ + +V+SKQ+PFP L+
Sbjct: 348 KFMEVGDVDIDEVQCIIANLIYMGHIKGYISHQHQKLVVSKQNPFPPLS 396
>sp|Q8BFV2|PCID2_MOUSE PCI domain-containing protein 2 OS=Mus musculus GN=Pcid2 PE=2 SV=1
Length = 399
Score = 248 bits (632), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 147/411 (35%), Positives = 247/411 (60%), Gaps = 28/411 (6%)
Query: 9 AHRRITDYLNRFSDAVSSQDVVSLKQLLSFSSNSPSLLSLADSLNVFQDANRLIKQSDNY 68
AH I YL + +A+ ++D S +L+SF P + + + ++ + + +
Sbjct: 2 AHITINQYLQQVYEAIDTRDGASCAELVSF--KHPHVANPRLQMASPEEKCQQVLEP--- 56
Query: 69 SPFADITVPLFRSLQHYRTGN--LVDAYLAFEKSANAFIQEFR-NWESAWALEALYVIAY 125
P+ ++ R Y GN ++AY +F++ F+ + E WAL +Y +A
Sbjct: 57 -PYDEMFAAHLRCT--YAVGNHDFIEAYKCQTVIVQSFLRAFQAHKEENWALPVMYAVAL 113
Query: 126 EIRVLAERADRELASNGKSP--EKLKAAGSFLMKVFGVLAG------KGSKRVGALYLTC 177
++R+ A AD++L GKS + L+ A LM F V A + SK+ G L+L
Sbjct: 114 DLRIFANNADQQLVKKGKSKVGDMLEKAAELLMSCFRVCASDTRAGIEDSKKWGMLFLVN 173
Query: 178 QLFKIYFKLGTVHLCRSVIRSIETARIFDFEEFPKRDKVTYMYYTGRLEVFNENFPAADQ 237
QLFKIYFK+ +HLC+ +IR+I+++ + D ++ ++TY YY GR +F+ +F A++
Sbjct: 174 QLFKIYFKINKLHLCKPLIRAIDSSNLKD--DYSTAQRITYKYYVGRKAMFDSDFKQAEE 231
Query: 238 KLSYALINCNPQSEANIRMILKYLIPVKLSIGILPKDWLLEKYNLVEYSNIVQALRRGDL 297
LS+A +C+ S+ N RMIL YL+PVK+ +G +P LL KY+L+++S + +A+ G+L
Sbjct: 232 YLSFAFEHCHRSSQKNKRMILIYLLPVKMLLGHMPTIELLRKYHLMQFSEVTKAVSEGNL 291
Query: 298 RLLRHALEEHEDQFLRSGVYLVLEKLELQVYQRLFKKIYIIQKQKDPSKAHQMKLDVIVK 357
LL AL +HE F+R G++L+LEKL++ Y+ LFKK+Y++ K HQ+ LD +
Sbjct: 292 LLLNEALAKHETFFIRCGIFLILEKLKIITYRNLFKKVYLL------LKTHQLSLDAFLV 345
Query: 358 ALKWLEM-DMDVDEVECIVAILIHKNLVKGYFAHKSKVVVLSKQDPFPKLN 407
ALK++ + D+D+DEV+CI+A LI+ +KGY +H+ + +V+SKQ+PFP L+
Sbjct: 346 ALKFMHVEDVDIDEVQCILANLIYMGHIKGYISHQHQKLVVSKQNPFPPLS 396
>sp|Q2TBN6|PCID2_BOVIN PCI domain-containing protein 2 OS=Bos taurus GN=PCID2 PE=2 SV=1
Length = 408
Score = 240 bits (612), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 145/414 (35%), Positives = 245/414 (59%), Gaps = 25/414 (6%)
Query: 9 AHRRITDYLNRFSDAVSSQDVVSLKQLLSFSSNSPSLLSLADSLNVFQDANRLIKQSDNY 68
AH I YL + +A+ ++D SL +L+SF P + + + ++ + + +
Sbjct: 2 AHITINQYLQQVCEAIDTRDGASLAELVSF--KHPHVANPRLQMASPEEKCQQVLEP--- 56
Query: 69 SPFADITVPLFRSLQHYRTGN--LVDAYLAFEKSANAFIQEFR-NWESAWALEALYVIAY 125
P+ ++ R Y GN ++AY +F++ F+ + E WAL +Y +A
Sbjct: 57 -PYDEMFAAHLRCT--YAVGNHDFIEAYKCQTVIVQSFLRAFQAHKEENWALPVMYAVAL 113
Query: 126 EIRVLAERADRELASNGKSP--EKLKAAGSFLMKVFGVLAG------KGSKRVGALYLTC 177
++R+ A AD++L GKS + L+ A LM F V A + SK+ G L+L
Sbjct: 114 DLRIFANNADQQLVKKGKSKVGDMLEKAAELLMGCFRVCASDTRAGIEDSKKRGMLFLVN 173
Query: 178 QLFKIYFKLGTVHLCRSVIRSIETARIFDFEEFPKRDKVTYMYYTGRLEVFNENFPAADQ 237
QLFKIYFK+ +HLC+ +IR+I+++ + D ++ +VTY YY GR +F+ +F A++
Sbjct: 174 QLFKIYFKINKLHLCKPLIRAIDSSNLKD--DYSTAQRVTYRYYVGRKAMFDSDFKQAEE 231
Query: 238 KLSYALINCNPQSEANIRMILKYLIPVKLSIGILPKDWLLEKYNLVEYSNIVQALRRGDL 297
LS+A +C+ S+ N RM+L YL+PVK+ +G +P LL KY+L++++ + +A+ G+L
Sbjct: 232 YLSFAFEHCHRSSQKNKRMVLIYLLPVKMLLGHMPTIELLRKYHLMQFAEVTRAVSEGNL 291
Query: 298 RLLRHALEEHEDQFLRSGVYLVLEKLELQVYQRLFKKIYIIQKQKDPS---KAHQMKLDV 354
LL AL HE F+R G++L+LEKL++ Y+ LFKK+ + K HQ+ LD
Sbjct: 292 LLLNEALAAHETFFIRCGIFLILEKLKIITYRNLFKKVNSLSSASSRYLLLKTHQLSLDA 351
Query: 355 IVKALKWLEM-DMDVDEVECIVAILIHKNLVKGYFAHKSKVVVLSKQDPFPKLN 407
+ ALK++++ D+D+ EV+CI+A LI+ +KGY +H+ + +V+SKQ+PFP L+
Sbjct: 352 FLVALKFMQVEDVDIAEVQCILANLIYMGHIKGYISHQHQKLVVSKQNPFPPLS 405
>sp|Q5U3P0|PCID2_DANRE PCI domain-containing protein 2 OS=Danio rerio GN=pcid2 PE=2 SV=1
Length = 399
Score = 225 bits (573), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 134/410 (32%), Positives = 239/410 (58%), Gaps = 24/410 (5%)
Query: 9 AHRRITDYLNRFSDAVSSQDVVSLKQLLSFSSNSPSLLSLADSLNVFQDANRLIKQSDNY 68
AH + YL + +A+ S+D +++SF P + + L+ ++ + + +
Sbjct: 2 AHITLNQYLQQVLEAIDSRDGSFCAEMMSF--KHPHVANPRLQLSSPEEKCQQLLEP--- 56
Query: 69 SPFADITVPLFRSLQHYRTGNLVDAYLAFEKSANAFIQEFR-NWESAWALEALYVIAYEI 127
P+ ++ R + V+AY +F++ F+ + E WAL ++ + ++
Sbjct: 57 -PYDEMVAAHLRCTFAVSNHDFVEAYKCQTVVVQSFLKAFQAHKEENWALPIMFAVTLDL 115
Query: 128 RVLAERADRELASNGKSP--EKLKAAGSFLMKVFGVLAGKG------SKRVGALYLTCQL 179
R+ A A++ L GK + L+ A LM F V A SK+ G L+L QL
Sbjct: 116 RIFANNAEQHLQQKGKGKVGDMLEKAAEQLMSCFRVCASDNRAGIDDSKKWGMLFLINQL 175
Query: 180 FKIYFKLGTVHLCRSVIRSIETARIFDFEEFPKRDKVTYMYYTGRLEVFNENFPAADQKL 239
FKIYFK+ +HLC+ +IR+I+++ + D E+ +VTY YY GR +F+ +F A++ L
Sbjct: 176 FKIYFKINKLHLCKPLIRAIDSSNLKD--EYTMAQRVTYKYYVGRKAMFDSDFKPAEECL 233
Query: 240 SYALINCNPQSEANIRMILKYLIPVKLSIGILPKDWLLEKYNLVEYSNIVQALRRGDLRL 299
S++ +C+ + N R+IL YL+PVK+ +G +P LL+KY+L++++++ +A+ G+L L
Sbjct: 234 SFSFTHCHRSCQRNKRLILIYLLPVKMLLGHMPTHQLLKKYDLMQFADVTRAVSEGNLLL 293
Query: 300 LRHALEEHEDQFLRSGVYLVLEKLELQVYQRLFKKIYIIQKQKDPSKAHQMKLDVIVKAL 359
L AL +HE F+R G++L+LEKL++ Y+ LFKK+Y + + HQ+ L + +L
Sbjct: 294 LNAALVKHETFFIRCGIFLILEKLKIITYRNLFKKVYHL------LRTHQLPLAAFLVSL 347
Query: 360 KWLEM-DMDVDEVECIVAILIHKNLVKGYFAHKSKVVVLSKQDPFPKLNG 408
+ ++ D+D+DEV+CI+A LI+ +KGY +H+ + +V+SKQ+PFP L+
Sbjct: 348 QMTKVEDVDIDEVQCILANLIYMGHIKGYISHQHQKLVVSKQNPFPPLSS 397
>sp|Q9VTL1|PCID2_DROME PCI domain-containing protein 2 homolog OS=Drosophila melanogaster
GN=PCID2 PE=1 SV=2
Length = 395
Score = 207 bits (528), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 114/326 (34%), Positives = 195/326 (59%), Gaps = 19/326 (5%)
Query: 91 VDAYLAFEKSANAFIQEFRNW-ESAWALEALYVIAYEIRVLAERADRELASNGKSPEK-L 148
++AY + A ++ + + W L +Y + ++R LA+ ++ G +P L
Sbjct: 79 MEAYTQQSAACGAVVRLLQQLKDENWCLPLMYRVCLDLRYLAQACEKH--CQGFTPGHVL 136
Query: 149 KAAGSFLMKVFGVLAGKG------SKRVGALYLTCQLFKIYFKLGTVHLCRSVIRSIETA 202
+ A +M F V A G +KR+G + L QLFKIYF++ +HLC+ +IR+I+
Sbjct: 137 EKAADCIMACFRVCAADGRASEEDTKRLGMMNLVNQLFKIYFRINKLHLCKPLIRAIDNC 196
Query: 203 RIFDFEEFPKRDKVTYMYYTGRLEVFNENFPAADQKLSYALINCNPQSEANIRMILKYLI 262
IF + FP +++TY Y+ GR +F+ N+ AA Q LSYA NC + +N R+IL YL+
Sbjct: 197 -IFK-DSFPLPEQITYKYFVGRRAMFDSNYQAAVQYLSYAFSNCPDRFASNKRLILIYLV 254
Query: 263 PVKLSIGILPKDWLLEKYNLVEYSNIVQALRRGDLRLLRHALEEHEDQFLRSGVYLVLEK 322
PVK+ +G LP LL++Y+L+ + ++ A++ G++ + + E +RSG+YL++EK
Sbjct: 255 PVKMLLGYLPSKSLLQRYDLLLFLDLAMAMKAGNVNRFDEIVRDQELVLIRSGIYLLVEK 314
Query: 323 LELQVYQRLFKKIYIIQKQKDPSKAHQMKLDVIVKALKWLEM-DMDVDEVECIVAILIHK 381
L+ VY+ LFKK+++I+ K+HQ+ + + AL ++ + D+ +DE CIVA LI+
Sbjct: 315 LKFLVYRNLFKKVFVIR------KSHQLDMGDFLSALHFVGLTDVSLDETHCIVANLIYD 368
Query: 382 NLVKGYFAHKSKVVVLSKQDPFPKLN 407
+KGY +H +V+SKQ+PFP ++
Sbjct: 369 GKIKGYISHAHNKLVVSKQNPFPSVS 394
>sp|Q54PX7|PCID2_DICDI PCI domain-containing protein 2 homolog OS=Dictyostelium discoideum
GN=pcid2 PE=3 SV=1
Length = 430
Score = 194 bits (494), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 116/357 (32%), Positives = 198/357 (55%), Gaps = 29/357 (8%)
Query: 71 FADITVPLFRSLQHYRTGNLVDAYLAFEKSANAFIQEFRNWESAWALEALYVIAYEIRVL 130
+ +I RS+ DA+ ++ N+F++ F W+ L+ ++ ++R++
Sbjct: 88 YNEIVAYRLRSISSLLDSKYYDAFRYLIEAINSFVKVFE----LWSQNILWRLSLDLRLM 143
Query: 131 AERADRELASNGKSPEKL--------KAAGSFLMKVFGVLAGK------GSKRVGALYLT 176
AE A + SN + +A+ + L K F SK+ AL +
Sbjct: 144 AELATLNVGSNDSNNSNNNVTIDYFEEASRTLLSKCFQAANADRTPNLAESKKNAALGVV 203
Query: 177 CQLFKIYFKLGTVHLCRSVIRSIETARIFDFEEFPKRDKVTYMYYTGRLEVFNENFPAAD 236
QLF+IYFK+ + LC+++I+++E+ E +P +TY ++ GRL VFN + A
Sbjct: 204 NQLFQIYFKINNLKLCKNLIKTMESPGFPTLESYPLNQVITYRFFNGRLSVFNGQYKKAQ 263
Query: 237 QKLSYALINCNPQSEANIRMILKYLIPVKLSIGILPKDWLLEKYNLVEYSNIVQALRRGD 296
++L YA C S N R+IL +L+P++L PK LLEK+ L ++ +IVQ+++ G+
Sbjct: 264 EELLYAFNKCPNDSIKNKRLILLFLVPMQLEQCKFPKKSLLEKFKLTQFIDIVQSIKSGN 323
Query: 297 LRLLRHALEEHEDQFLRSGVYLVLEKLELQVYQRLFKKIYIIQKQKDPSKAHQMKLDVIV 356
++ L H++ F+ G+YL+LEKL++ VY+ LFKK+++I + ++ + V
Sbjct: 324 IKQFNECLSTHQNFFISKGIYLILEKLKIIVYRNLFKKVHLI------TTGQRIPIGNFV 377
Query: 357 KALKWLEMD-MDVDEVECIVAILIHKNLVKGYFAHKSKVVVLSKQDPFPKLNGKPVN 412
ALKW+E D +D+DE ECI++ LI+ +KGY +HK +VV S +PFPKL P+N
Sbjct: 378 SALKWMENDAIDIDETECILSNLIYNGYLKGYISHKVALVV-SPTNPFPKL---PLN 430
>sp|P0CR48|CSN12_CRYNJ Protein CSN12 homolog OS=Cryptococcus neoformans var. neoformans
serotype D (strain JEC21 / ATCC MYA-565) GN=CSN12 PE=3
SV=1
Length = 403
Score = 174 bits (441), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 119/404 (29%), Positives = 213/404 (52%), Gaps = 22/404 (5%)
Query: 16 YLNRFSDAVSSQDVVSLKQLLSFSSNSPSLLSLADSLNVFQDANRLIKQSDNYSPFADIT 75
++N F+ + +D L +LLS + +AD++ D RL D
Sbjct: 6 FVNSFTHPLQHEDHTPLLRLLSVHGKAAK--GIADTVGAI-DEKRLKNPGHTLPDLWDEI 62
Query: 76 VPLFRSLQH--YRTGNLVDAYLAFEKSANAFIQEFRNWESAWALEALYVIAYEIRVLAER 133
+ + Y+T + +A+ +K + F + F + +S+W L LY++ ++R LAE+
Sbjct: 63 AVRHCACVYALYKTKDYTEAFNQQDKLLSLFYRWFVD-QSSWVLPVLYMMLSDLRDLAEQ 121
Query: 134 ADREL-ASNGKSPEKLKAAGSFLMKVFGVLA------GKGSKRVGALYLTCQLFKIYFKL 186
AD+ + A GK P L+ + K F + A G+ S+R G + C K YFK+
Sbjct: 122 ADQTIHAETGKMPS-LEICTRTVSKAFSLCATDRQFKGEESRRRGVYHTACLTIKCYFKV 180
Query: 187 GTVHLCRSVIRSIET-ARIFDFEEFPKRDKVTYMYYTGRLEVFNENFPAADQKLSYALIN 245
G +LC+++IR++ + + + P D+VT+ +Y G L N AD++LS+AL +
Sbjct: 181 GKPNLCKNIIRAVVSDPKTPSVDTAPLPDQVTWHFYIGMLAFLNGEDKKADEELSWALKH 240
Query: 246 CNPQSEANIRMILKYLIPVKLSIGILPKDWLLEKYNLVE--YSNIVQALRRGDLRLLRHA 303
C ++ N +IL YLIP++L G P LL ++ +E ++ + A++ GD+
Sbjct: 241 CPADAKRNQELILTYLIPLRLLHGRFPSASLLSQHPRLELVFTPFINAIKNGDVEEYDRR 300
Query: 304 LEEHEDQFLRSGVYLVLEKLELQVYQRLFKKIYIIQKQKDPSKAHQMKLDVIVKALKWLE 363
LE + + + V+LV+E+ + LFKK ++ K+ ++ ++ ALK
Sbjct: 301 LEWAQVRLVGMSVWLVVERAREGCLRSLFKKAWMAS-----DKSTRVPIETFRLALKLHG 355
Query: 364 MDMDVDEVECIVAILIHKNLVKGYFAHKSKVVVLSKQDPFPKLN 407
+D++ DEVEC+VA +I++ +KGY +H+ K+VVL K +PFPK++
Sbjct: 356 VDVESDEVECMVANMIYRGYLKGYISHEKKMVVLGKTNPFPKMS 399
>sp|P0CR49|CSN12_CRYNB Protein CSN12 homolog OS=Cryptococcus neoformans var. neoformans
serotype D (strain B-3501A) GN=CSN12 PE=3 SV=1
Length = 403
Score = 174 bits (441), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 119/404 (29%), Positives = 213/404 (52%), Gaps = 22/404 (5%)
Query: 16 YLNRFSDAVSSQDVVSLKQLLSFSSNSPSLLSLADSLNVFQDANRLIKQSDNYSPFADIT 75
++N F+ + +D L +LLS + +AD++ D RL D
Sbjct: 6 FVNSFTHPLQHEDHTPLLRLLSVHGKAAK--GIADTVGAI-DEKRLKNPGHTLPDLWDEI 62
Query: 76 VPLFRSLQH--YRTGNLVDAYLAFEKSANAFIQEFRNWESAWALEALYVIAYEIRVLAER 133
+ + Y+T + +A+ +K + F + F + +S+W L LY++ ++R LAE+
Sbjct: 63 AVRHCACVYALYKTKDYTEAFNQQDKLLSLFYRWFVD-QSSWVLPVLYMMLSDLRDLAEQ 121
Query: 134 ADREL-ASNGKSPEKLKAAGSFLMKVFGVLA------GKGSKRVGALYLTCQLFKIYFKL 186
AD+ + A GK P L+ + K F + A G+ S+R G + C K YFK+
Sbjct: 122 ADQTIHAETGKMPS-LEICTRTVSKAFSLCATDRQFKGEESRRRGVYHTACLTIKCYFKV 180
Query: 187 GTVHLCRSVIRSIET-ARIFDFEEFPKRDKVTYMYYTGRLEVFNENFPAADQKLSYALIN 245
G +LC+++IR++ + + + P D+VT+ +Y G L N AD++LS+AL +
Sbjct: 181 GKPNLCKNIIRAVVSDPKTPSVDTAPLPDQVTWHFYIGMLAFLNGEDKKADEELSWALKH 240
Query: 246 CNPQSEANIRMILKYLIPVKLSIGILPKDWLLEKYNLVE--YSNIVQALRRGDLRLLRHA 303
C ++ N +IL YLIP++L G P LL ++ +E ++ + A++ GD+
Sbjct: 241 CPADAKRNQELILTYLIPLRLLHGRFPSASLLSQHPRLELVFTPFINAIKNGDVEEYDRR 300
Query: 304 LEEHEDQFLRSGVYLVLEKLELQVYQRLFKKIYIIQKQKDPSKAHQMKLDVIVKALKWLE 363
LE + + + V+LV+E+ + LFKK ++ K+ ++ ++ ALK
Sbjct: 301 LEWAQVRLVGMSVWLVVERAREGCLRSLFKKAWMAS-----DKSTRVPIETFRLALKLHG 355
Query: 364 MDMDVDEVECIVAILIHKNLVKGYFAHKSKVVVLSKQDPFPKLN 407
+D++ DEVEC+VA +I++ +KGY +H+ K+VVL K +PFPK++
Sbjct: 356 VDVESDEVECMVANMIYRGYLKGYISHEKKMVVLGKTNPFPKMS 399
>sp|Q95QU0|PCID2_CAEEL PCI domain-containing protein 2 homolog OS=Caenorhabditis elegans
GN=C27F2.10 PE=3 SV=1
Length = 413
Score = 172 bits (436), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 109/309 (35%), Positives = 175/309 (56%), Gaps = 18/309 (5%)
Query: 115 WALEALYVIAYEIRVLAERA------DRELASNGKSPEKLKAAG---SFLMKVFGVLAGK 165
W L Y + ++R L++ A D E SN S + A + V V A +
Sbjct: 112 WFLPIFYRLCTDLRWLSKGAEACVSGDDEGDSNANSFFESAAKAITECYRTCVSDVHAEE 171
Query: 166 GS-KRVGALYLTCQLFKIYFKLGTVHLCRSVIRSIETARIFDFEEFPKRDKVTYMYYTGR 224
G+ K+V L +T QLF+IYF++ ++L + +IR+I+ + +F DKV Y Y+ GR
Sbjct: 172 GTTKKVAMLNMTNQLFQIYFQINKLNLLKPLIRAIDNCGSL-YHDFLMSDKVAYNYFLGR 230
Query: 225 LEVFNENFPAADQKLSYALINCNPQSEANIRMILKYLIPVKLSIGILPKDWLLEKYNLVE 284
+F+ + A++ L YA NC S +N R IL YLIPVK+ +G +P LL +Y L E
Sbjct: 231 KAMFDADLNLAEKSLLYAFRNCPADSMSNKRKILIYLIPVKMFLGHMPTSQLLHEYRLDE 290
Query: 285 YSNIVQALRRGDLRLLRHALEEHEDQFLRSGVYLVLEKLELQVYQRLFKKIYIIQKQKDP 344
+ ++V ++ G+L L AL +E F++ G++L+LEKL + ++ LFKK+ I
Sbjct: 291 FQDVVAGVKDGNLAQLDGALAANEAFFIKCGIFLMLEKLRMITFRTLFKKVSQI------ 344
Query: 345 SKAHQMKLDVIVKALKWLEM-DMDVDEVECIVAILIHKNLVKGYFAHKSKVVVLSKQDPF 403
Q+ LD AL+++ + D+D+DE+ECI+A LI +KGY +H+ + +V+SK + F
Sbjct: 345 VGTAQIPLDAFQTALRFVGVTDVDMDELECIIANLIASKKIKGYLSHQHQKLVISKMNAF 404
Query: 404 PKLNGKPVN 412
P L+G N
Sbjct: 405 PTLSGVSSN 413
>sp|Q60YJ7|PCID2_CAEBR PCI domain-containing protein 2 homolog OS=Caenorhabditis briggsae
GN=CBG18211 PE=3 SV=1
Length = 413
Score = 168 bits (426), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 111/309 (35%), Positives = 176/309 (56%), Gaps = 18/309 (5%)
Query: 115 WALEALYVIAYEIRVLAERA------DRELASNGKSPEKLKAAG---SFLMKVFGVLAGK 165
W L Y + ++R L++ A D E SN S + A + V V A +
Sbjct: 112 WFLPIFYRLCTDLRWLSKGAESCASGDDEGDSNANSFFESAAKAITECYRTCVSDVHAEE 171
Query: 166 G-SKRVGALYLTCQLFKIYFKLGTVHLCRSVIRSIETARIFDFEEFPKRDKVTYMYYTGR 224
G +K+V L +T QLF+IYF++ ++L + +IR+I+ + +F DKV Y Y+ GR
Sbjct: 172 GKTKKVAMLNMTNQLFQIYFQINKLNLLKPLIRAIDNCGPL-YNKFLMADKVAYNYFLGR 230
Query: 225 LEVFNENFPAADQKLSYALINCNPQSEANIRMILKYLIPVKLSIGILPKDWLLEKYNLVE 284
+F+ + A++ L YA NC +S +N R IL YLIPVK+ +G +P LL +Y L E
Sbjct: 231 KALFDGDLILAEKGLVYAFRNCPTESVSNKRKILVYLIPVKMFLGHMPTASLLHRYRLDE 290
Query: 285 YSNIVQALRRGDLRLLRHALEEHEDQFLRSGVYLVLEKLELQVYQRLFKKIYIIQKQKDP 344
+ +V A++ G L + +AL + + F++ G+YLVLEKL Y+ LFKK+ + +
Sbjct: 291 FQEVVAAVKDGHLGRVDNALLTNGEFFIKCGIYLVLEKLRTITYRNLFKKVSQMVGKV-- 348
Query: 345 SKAHQMKLDVIVKALKWLEM-DMDVDEVECIVAILIHKNLVKGYFAHKSKVVVLSKQDPF 403
Q+ LD AL+++ + D+D+DE+ECI+A LI + VKGY AH+ + +V+SK + F
Sbjct: 349 ----QIPLDAFQAALRFVGVTDVDMDELECIIANLIAEKKVKGYLAHQHQKLVISKTNAF 404
Query: 404 PKLNGKPVN 412
P L+ N
Sbjct: 405 PTLSSVSSN 413
>sp|Q4P8T5|CSN12_USTMA Protein CSN12 homolog OS=Ustilago maydis (strain 521 / FGSC 9021)
GN=CSN12 PE=3 SV=1
Length = 454
Score = 148 bits (374), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 182/387 (47%), Gaps = 50/387 (12%)
Query: 69 SPFADITVPLFRSLQHY--------------------RTGNLVDAYLAFEKSANAFIQEF 108
SP+ D+ V RSL + R+ L +A+ A+ +AF++ F
Sbjct: 61 SPWEDMCVNHLRSLYSFSLASSLPASASDAVDGEGKTRSERLGEAFDAYNSVVSAFVRYF 120
Query: 109 RNWESA-WALEALYVIAYEIRVLAERADREL----ASNGKSP-------EKLKAAGSFLM 156
WAL L ++ +R LA +AD SN +P ++L+ L
Sbjct: 121 STLTPGRWALPLLRILCLNLRWLAVQADSAAHIASVSNTWAPTRSTQPNKRLEECARQLN 180
Query: 157 KVF-GVLAGKG-----SKRVGALYLTCQLFKIYFKLGTVHLCRSVIRSIETARIFDFEEF 210
K F +A + S++ G + +FK YF+L +V LCR+++R+I A + D +
Sbjct: 181 KAFSACIADRNADMHESRKWGTYEVVGMVFKTYFRLKSVGLCRNILRAINAADLPDLCAY 240
Query: 211 PKRDKVTYMYYTGRLEVFNENFPAADQKLSYALINCNPQSEANIRMILKYLIPVKLSIGI 270
P+ +VT+ YY G L NE + A+ +L +L C+ + N +IL YLIPVKL G
Sbjct: 241 PRSQQVTFRYYVGVLAFLNEEYDHAELELQASLQMCHRCALINQGLILTYLIPVKLLKGS 300
Query: 271 LPKDWLLEKYN-----LVEYSNIVQALRRGDLRLLRHALEEH--EDQFLRSGVYLVLEKL 323
LP LL+ L Y +ALR GD++ AL E ++ G Y+ +E+
Sbjct: 301 LPHPSLLDPTTPIGRKLAVYQPFTRALRTGDVKAFDQALANPTIESSLVKRGTYIAIERA 360
Query: 324 ELQVYQRLFKKIYIIQKQKDPSKAHQMKLDVIV----KALKWLEMDMDVDEVECIVAILI 379
+ L K I+ + +P+ +L + + + + + + E+E I+A LI
Sbjct: 361 RDATLRTLLKTIW-LSLPLNPTNTRPTRLTLTLLHHATSTDLIRLKYSIKELEWILATLI 419
Query: 380 HKNLVKGYFAHKSKVVVLSKQDPFPKL 406
+K VKGY AH+ V+VLS +D FP L
Sbjct: 420 YKGYVKGYIAHERGVLVLSAKDAFPAL 446
>sp|Q4WJX0|CSN12_ASPFU Protein CSN12 homolog OS=Neosartorya fumigata (strain ATCC MYA-4609
/ Af293 / CBS 101355 / FGSC A1100) GN=csn12 PE=3 SV=1
Length = 455
Score = 145 bits (365), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 122/416 (29%), Positives = 211/416 (50%), Gaps = 49/416 (11%)
Query: 31 SLKQLLSFSSNSPSLLSLAD-SLNVFQ-DANRLIKQSDNYSPFADITVPLFRSL------ 82
S +LLSF + S S AD ++FQ + +L KQ N + DI ++++
Sbjct: 32 SPDRLLSFYNFSDSDHISADLRYSLFQANGVKLPKQEQN--GWVDIFAAYWKAVGEIVKF 89
Query: 83 -QHYRTGNLVDAYLAFEKSANAFIQEFRNWE-SAWALEALYVIAYEIRVLAERADRELAS 140
++ + + + A++ AN I+ + N+ AW + LYV+ +RV A +AD E++S
Sbjct: 90 EEYNPSASWAKVFDAWKNVANTLIRGYTNFGLQAWTVPCLYVVGKYLRVFAIKADTEISS 149
Query: 141 NG----------------KSPEKLKAAGSFLMKVFGVLAG-----KGSKRVGALYLTCQL 179
G + KL+ A + ++F + + S++ G T L
Sbjct: 150 KGAMAFGDQLQDDVAADFEKSAKLEEAARIINRMFTLCLSDRAPIEESRKWGIYNTTNLL 209
Query: 180 FKIYFKLGTVHLCRSVIR--SIETARIFDFEEFPKRDKVTYMYYTGRLEVFNENFPAADQ 237
FK YFKL +V L ++++R S +A + + E FPK VT+ YY G + +EN+ A++
Sbjct: 210 FKTYFKLNSVGLSKNLLRALSASSADLPELEAFPKSHIVTFKYYVGVIHFLDENYREAEE 269
Query: 238 KLSYALINCNPQSEANIRMILKYLIPVKL-SIGILPKDWLLEKYNLVE--YSNIVQALRR 294
L+YA C+ + N +IL YL+P L + LP LL + +E + + +R+
Sbjct: 270 HLAYAWNMCHKGAFKNRELILTYLVPCHLVTTHTLPSQKLLAPFPRLEKLFRPLCDCIRK 329
Query: 295 GDLRLLRHALEEHEDQFLRSGVYLVLEKLELQVYQRLFKKIYI---IQKQKD---PSKAH 348
GDL A+ E++F++ +YL LE+ + LF+K++I ++ KD P +
Sbjct: 330 GDLVGFDTAMFAGEEEFVKRRIYLPLERGRDIALRNLFRKVFIAGGFEESKDGQPPIRRT 389
Query: 349 QMKLDVIVKALK-WLEMD----MDVDEVECIVAILIHKNLVKGYFAHKSKVVVLSK 399
++ + AL+ D +D+DEVEC+++ LI+K L+KGY A + +VVLSK
Sbjct: 390 RVPVAEFAAALRIGTHADDRSRVDIDEVECLLSNLIYKGLMKGYIARERGMVVLSK 445
>sp|Q7SD63|CSN12_NEUCR Protein CSN12 homolog OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=csn-12
PE=3 SV=1
Length = 461
Score = 129 bits (325), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 119/457 (26%), Positives = 202/457 (44%), Gaps = 79/457 (17%)
Query: 20 FSDAVSSQDVVSLKQLLSFSSNSPSLLSLADSLNVFQDANRLIKQSDNYSPFADITVPLF 79
FS+A SS+D L Q LS L ++ S DA +IK+ S F
Sbjct: 8 FSNAQSSRDGYQLAQTLSPDLPQQQLQAIWKSCG-HHDAQNVIKRGIQNSTSG------F 60
Query: 80 RSLQHYRTGNLVDAYLAFEKS------------ANAFIQEFRNWES-------------- 113
L D YLA+ K+ +++ + + W+
Sbjct: 61 EKLPKDEVQGWSDVYLAYWKAIGELLPALNQAPQSSWTKVYDAWKELLSALYRGYIGQGF 120
Query: 114 -AWALEALYVIAYEIRVLAERADRELASN------------------GKSPEKLKAAGSF 154
AW++ LYV+A +R A +AD E +N + +KL+
Sbjct: 121 EAWSIPCLYVVAKNLRFFALKADEERNNNVAAGDTSGQIFQDDFDPESEQNQKLEDCARQ 180
Query: 155 LMKVFGVLAG-----KGSKRVGALYLTCQLFKIYFKLGTVHLCRSVIRSIETAR--IFDF 207
L ++F + + S++ G Y+ LFK YFKL + L +++++++ R +
Sbjct: 181 LNRIFTLCLNDRAPLEESRKWGIYYIINLLFKTYFKLNSASLSKNILKTLSAYRGDMPPL 240
Query: 208 EEFPKRDKVTYMYYTGRLEVFNENFPAADQKLSYALINCNPQSEANIRMILKYLIPVK-L 266
FPK +VT+ YY G L EN+ A++ L+ A C+ + N +IL YL+P L
Sbjct: 241 SAFPKSQQVTFKYYEGVLCFLEENYFQAEEHLTQAWSLCHKDAMKNKELILTYLVPCHLL 300
Query: 267 SIGILPKDWLLEKYNLVE--YSNIVQALRRGDLRLLRHALEEHEDQFLRSGVYLVLEKLE 324
+ LP LLE Y ++ + + +++G+L AL++ ED+F++ +YL LE+
Sbjct: 301 TTHTLPSQKLLEPYPRLQKLFLPLSNCIKKGELHAFDLALQQGEDEFVKRRIYLTLERGR 360
Query: 325 LQVYQRLFKKIYII-----QKQKDPSKAHQMKLDV--IVKALKWLEMDM-DVDEVECIVA 376
+ L +K++I K + + + ++ V A+ M + DE+EC++A
Sbjct: 361 DIALRNLLRKVFIAGGFEESKVEGGPRVRRTRIPVAEFAAAISLGSKQMLETDEIECLMA 420
Query: 377 ILIH---------KNLVKGYFAHKSKVVVLSKQDPFP 404
+I+ KNL+KGY A + VVLSK FP
Sbjct: 421 NMIYKLVTNQSGIKNLMKGYIARERGFVVLSKSGAFP 457
>sp|Q4IMN9|CSN12_GIBZE Protein CSN12 homolog OS=Gibberella zeae (strain PH-1 / ATCC
MYA-4620 / FGSC 9075 / NRRL 31084) GN=CSN12 PE=3 SV=2
Length = 455
Score = 129 bits (325), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 117/458 (25%), Positives = 209/458 (45%), Gaps = 81/458 (17%)
Query: 17 LNRFSDAVSSQDVVSLKQLLSF---SSNSPSLLSLADSLN---VFQDANRLIKQSDNYSP 70
+F++A S ++ L Q LS + + L+++ S N V D IK S +
Sbjct: 5 FQQFAEAHSLRNGYKLAQTLSPVPPADDPQRLMAVWRSTNSHSVKGDIKHFIKSSTAHK- 63
Query: 71 FADITVPLFRSLQHYRTGNLVDAY----------LAFEKSANAFIQEFRNWES------- 113
R L H T V+ Y LA E +++ + + W+
Sbjct: 64 ---------RKLDHDETTGWVEVYTSYWKAVSEILAGESGKSSWTKVYEAWKELTSVLIR 114
Query: 114 --------AWALEALYVIAYEIRVLAERADRE-------------LASNGKSPE-----K 147
AW + +LY++ +R+ A ++D E L S+ PE +
Sbjct: 115 GYNSHGFEAWTIPSLYMVGKYLRLFAIKSDEERRAKAFDTGPGASLISDDFDPETDKQLQ 174
Query: 148 LKAAGSFLMKVFGVLAG-----KGSKRVGALYLTCQLFKIYFKLGTVHLCRSVIRSI--- 199
L+ L ++F + + S++ G ++ LFK YFKL + L R++++++
Sbjct: 175 LRDCEGHLKRIFSLCLNDRAPLEESRKWGIYFVINLLFKTYFKLNSASLSRTILKTLAVY 234
Query: 200 -ETARIFDFEEFPKRDKVTYMYYTGRLEVFNENFPAADQKLSYALINCNPQSEANIRMIL 258
+ + E FPK +VT+ +Y G L EN+ A+ L+ A C+ + IL
Sbjct: 235 NDKGDMPPLEMFPKSQRVTFKFYEGVLLFLEENYIKAESHLNEAWQLCHKDAYPQSERIL 294
Query: 259 KYLIPVKL-SIGILPKDWLLEKYNLVE--YSNIVQALRRGDLRLLRHALEEHEDQFLRSG 315
YLIP +L + +LP LLE Y ++ + + ++ G+L+ AL+ E +F++
Sbjct: 295 TYLIPCRLLTSHVLPTKALLENYPRLQDLFLPLATCIKTGNLQAFDQALQRGEAEFVKRR 354
Query: 316 VYLVLEKLELQVYQRLFKKIYII-----QKQKDPSKAHQMKLDVIVKALKWLEMD----M 366
+YL LE+ + L +K++I K+ D + + ++ V + + M +
Sbjct: 355 IYLTLERGRDIALRNLLRKVFIAGGFDEAKEADAAPVRRTRIPV-AEFQAAISMGSGHLV 413
Query: 367 DVDEVECIVAILIHKNLVKGYFAHKSKVVVLSKQDPFP 404
D DEVEC++A +I+K+L+KGY A + +VVLSK+ FP
Sbjct: 414 DPDEVECMLANMIYKDLMKGYIARERGIVVLSKKGAFP 451
>sp|O13873|CSN12_SCHPO Protein CSN12 homolog OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=csn12 PE=3 SV=1
Length = 423
Score = 129 bits (324), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 159/337 (47%), Gaps = 28/337 (8%)
Query: 92 DAYLAFEKSANAFIQEFRNWESAWA----LEALYVIAYEIRVLAERADREL--------- 138
D AF++ +R + S L L+++ ++R LA A +
Sbjct: 88 DPAAAFKQQTELAQHLYREFSSGRCTGVHLPVLFIVCKDLRFLAINAHNAMLRRKQQLKV 147
Query: 139 --ASNGKSPEKLKAAGSFLMKVFGVLAG-----KGSKRVGALYLTCQLFKIYFKLGTVHL 191
+ E+L+A + + F + S++ GA Y+ LFK+Y +L VHL
Sbjct: 148 ISVDESEENEQLEATARLINRAFTICINDRAPLSTSRKWGAYYIMGLLFKLYLRLDCVHL 207
Query: 192 CRSVIRSIETARIFDFEEFPKRDKVTYMYYTGRLEVFNENFPAADQKLSYALINCNPQSE 251
+V+R+++ + D FPK V + YY G + N+N+ A +L A C+
Sbjct: 208 TNNVLRAMKVVELPDISLFPKSHVVIFHYYLGIVAFLNQNYKNASAELEIAFSLCHKGYN 267
Query: 252 ANIRMILKYLIPVKLSIG-ILPKDWLLEKY-NLVE-YSNIVQALRRGDLRLLRHALEEHE 308
N+ +IL Y IP ++ + LP LL K+ NL Y + +AL+ G+L L+++E
Sbjct: 268 RNLELILSYWIPTRILVNHQLPTKNLLSKFPNLASVYIPLTRALKSGNLGEFGKCLQKNE 327
Query: 309 DQFLRSGVYLVLEKLELQVYQRLFKKIYIIQKQKDPSKAHQMKLDVIVKALKWLEMDMDV 368
++ +YL LE + LF+K +II K+ ++ + V AL+ D+
Sbjct: 328 TLLAKTKIYLTLEGTRDLCIRNLFRKTWIIC-----GKSTRLPVSVFQIALQVAGTDLPK 382
Query: 369 DEVECIVAILIHKNLVKGYFAHKSKVVVLSKQDPFPK 405
VE I+A +I K ++GY + + VVLS +DPFPK
Sbjct: 383 LHVEAILANMISKGYMRGYISRNFETVVLSAKDPFPK 419
>sp|Q6C1L4|CSN12_YARLI Protein CSN12 homolog OS=Yarrowia lipolytica (strain CLIB 122 / E
150) GN=CSN12 PE=3 SV=1
Length = 396
Score = 122 bits (306), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 101/391 (25%), Positives = 189/391 (48%), Gaps = 24/391 (6%)
Query: 36 LSFSSNSPSLLSLADSLNVFQDANRLIKQSDNYSPFADITVPLFRSLQHYRTGNLVDAYL 95
L+ + NS + L LA L V D N Q++ + A IT +++ + D+
Sbjct: 8 LNAAINSRNGLQLAHLLAVNPDTNPTAPQTNALAVAAGITNQVWQPVVEAHVLACNDSST 67
Query: 96 AFEK--SANAFIQEFRNW---ESAWALEALYVIAYEIRVLAERADRELASNGKSPE---K 147
E+ + AF+ E E W L LY + +R + RA +E+ E +
Sbjct: 68 PLERLQAHQAFLSELNRVSEKEDVWILPILYAASTHLRGIGRRALKEIQDKEAKNEILTQ 127
Query: 148 LKAAGSFLMKVFGVLAG------KGSKRVGALYLTCQLFKIYFKLGTVHLCRSVIRSIET 201
L+++ + + + + SK+ G + +L K+YF L ++ +SVI+ +E+
Sbjct: 128 LESSSRVVNRTLTLCLNDRHPSLQKSKKWGTYFFVGELCKLYFLLRKRNMSKSVIKVVES 187
Query: 202 AR--IFDFEEFPKRDKVTYMYYTGRLEVFNENFPAADQKLSYALINCNPQSEANIRMILK 259
+ +P+ TY YY G L + +++ A L+ AL C +S N +IL
Sbjct: 188 MSRDLPPLASYPRSHTCTYSYYRGVLSLMDDDVEQAQNWLTQALNQCFYKSTDNQELILL 247
Query: 260 YLIPVK-LSIGILPKDWLLEKYNLVE--YSNIVQALRRGDLRLLRHALEEHEDQFLRSGV 316
+LIPV+ L +P + EK+ + Y ++ AL RGD+ A+ + F++ +
Sbjct: 248 HLIPVQFLMTNQVPSKAVWEKFPRLHTVYHQMLTALLRGDVLSFDKAVTQRRSLFVKKYL 307
Query: 317 YLVLEKLELQVYQRLFKKIYIIQKQKDPSKAHQMKLDVIVKALKWLEMDMDVDEVECIVA 376
YL +EK+ + V+++LF ++++ + KA ++ +D A K + +D+ D +E V+
Sbjct: 308 YLAVEKMRVFVFEKLFYRVFLAK-----DKATRITIDDYQAAAKLVGVDVSPDFLEATVS 362
Query: 377 ILIHKNLVKGYFAHKSKVVVLSKQDPFPKLN 407
+I+ + +KGY + + VVL + FPKL+
Sbjct: 363 NMIYHDRLKGYISRERHTVVLRAEGAFPKLD 393
>sp|Q75BU2|CSN12_ASHGO COP9 signalosome complex subunit 12 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=CSN12
PE=3 SV=2
Length = 412
Score = 108 bits (270), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 148/331 (44%), Gaps = 40/331 (12%)
Query: 110 NWESAWALEALYVIAYEIRVLAERADREL--------ASNGKSPEKLKAAGSFLMKVFGV 161
WES W + LY A ++ +A D + + + L G + +
Sbjct: 81 EWESGWVVYPLYTCARQLVQMAAALDARTERAAEAAQCGDLATEDHLTQCGRAVHMSLNL 140
Query: 162 L-----AGKGSKRVGALYLTCQLFKIYFKLGTVHLCRSVIRSIETARIFDF----EEFPK 212
+KR GA Y LF+ Y +LG L ++++ +E+ R D F +
Sbjct: 141 CLKDRDPAASNKRHGAYYFALLLFRTYARLGAHSLVTNMVKVLES-RAQDLPPVERAFGE 199
Query: 213 RD--KVTYMYYTGRLEVFNE-NFPAADQKLSYALINCNPQSEANIRMILKYLIPVK-LSI 268
R VTY YY GR ++ + L+ AL+ C+ + ++IL YL+PV L+
Sbjct: 200 RRALTVTYCYYLGRYHACRRADYEKGFRWLNTALLTCHRDHTRHHQLILTYLVPVAFLAR 259
Query: 269 GILPKDWLLEKY------NLVEYSNIVQALRRGDLRLLRHALEEHEDQFLRSGVYLVLEK 322
PK ++ + + Y+ +V ALR GDL L L + LR G+YL L
Sbjct: 260 RWYPKHHVIAAWPPPQDPAAIHYAALVAALRSGDLGLYDRELVRMQLPLLRRGLYLPLSH 319
Query: 323 LELQVYQRLFKKIYIIQKQKDPSKAHQMKLDVIVKALKWLEMDMD-------VDEVECIV 375
L + RL K ++ + + Q+ + +I AL + +D EC++
Sbjct: 320 LRPYILLRLVKAVWRLS-----GGSSQLPIRIIAAALAYSTSATPDAGGERLLDHTECLL 374
Query: 376 AILIHKNLVKGYFAHKSKVVVLSKQDPFPKL 406
A LI + VKGY +H ++V+V+S+ +PFP+L
Sbjct: 375 ANLIARGYVKGYLSHGNRVLVVSRTEPFPRL 405
>sp|Q9Y820|YON7_SCHPO PCI domain-containing protein C1105.07c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPBC1105.07c PE=4
SV=1
Length = 442
Score = 106 bits (264), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 121/228 (53%), Gaps = 11/228 (4%)
Query: 182 IYFKLGTVHLCRSVIRSIETARIFDFEEFPKRDKVTYMYYTGRLEVFNENFPAADQKLSY 241
+YF+L + LC+++ ++ ++ D + VT+ YY GR ++ A L +
Sbjct: 191 LYFRLKQIRLCQTIQANVISSGA-DISRATMAELVTFRYYLGRCHLYQRKIHQAKDHLLF 249
Query: 242 ALINCNPQSEANIRMILKYLIPVKLSIGILPKDWLLEKYNLV-EYSNIVQALRRGDLRLL 300
+ + C + R+ L YL L +G P LLEKY L + +++AL+ GD++
Sbjct: 250 SFLQCPDECYHQKRLSLIYLTTCLLILGKSPTKGLLEKYKLTAAFEPLIKALKSGDIKSF 309
Query: 301 RHALEEHEDQ--FLRSGVYL-VLEKLELQVYQRLFKKIYII---QKQKDPSKAHQMKLDV 354
R +LE++ + F++ G+YL +L++ E+ +++ LF+K+++ Q QK P + L
Sbjct: 310 RLSLEDNSRRKWFIKRGIYLTLLDRCEIILWRNLFRKVFLFTFEQSQKTPHVSGSYLL-- 367
Query: 355 IVKALKWLEMDMDVDEVECIVAILIHKNLVKGYFAHKSKVVVLSKQDP 402
L + D+D+VECI LI + +KGY H S +VL K+DP
Sbjct: 368 TAARLSTNDNSYDMDDVECICVSLIDQGYIKGYIIHASSTLVL-KKDP 414
>sp|Q6BGR7|CSN12_DEBHA Protein CSN12 homolog OS=Debaryomyces hansenii (strain ATCC 36239 /
CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=CSN12 PE=3
SV=2
Length = 438
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 157/304 (51%), Gaps = 28/304 (9%)
Query: 130 LAERADRELASNGKSPEKLKAA--GSFLMKVFGV-LAGKGSKRVGALYLTCQLFKIYFKL 186
L+ + E ++ S E+L A GSF + + L SKR+ + L KIYFKL
Sbjct: 133 LSNLENNEYGNSSSSLERLAATINGSFKLSLNDKNLDLSQSKRLDIYFFLGNLIKIYFKL 192
Query: 187 GTVHLCRSVIRSIETARIFDFEEF-----PKRDKVTYMYYTGRLEVFNENFPAADQKLSY 241
G + L +SV ++++ R F+ + KR VTY+YY+ L + + +F +++KL
Sbjct: 193 GKLELAKSVEKALKGTR-FNLPKLNGAGSSKRYAVTYLYYSALLSLDDADFTTSEEKLVK 251
Query: 242 AL--INC--NPQSEANIRMILKYLIPVKLSIG--ILPKDWLLEKYNLVEY---SNIVQAL 292
A+ ++C +P++ N + ++ + P + + EK+ +++ N+ A+
Sbjct: 252 AMEILSCYKDPKNVKNQTEKILIILLPLKLYNKRLTPSNEIWEKFPKLKFMYKDNLFDAI 311
Query: 293 RRGDLRLLRHALEEHEDQFLRSGVYLVLEKLELQVYQRLFKK-IYIIQKQKDPSKAHQMK 351
+ G+L+ AL +++ L++ +YL+ E ++ Y +L KK + II +K+H +
Sbjct: 312 KNGNLKKFDQALTKYQLILLKNHLYLLFEMMKSLCYLKLVKKTVSIIHSLNSETKSHIVP 371
Query: 352 LDVIVKALKWLEMD---------MDVDEVECIVAILIHKNLVKGYFAHKSKVVVLSKQDP 402
L I AL++ D ++D VECI+A LI +KGY +H ++ +VLSK +
Sbjct: 372 LSAIQLALEFSTNDSYKESDKFAYNLDAVECILANLISSGKIKGYLSHANRCIVLSKANA 431
Query: 403 FPKL 406
FP L
Sbjct: 432 FPSL 435
>sp|Q6CPB1|CSN12_KLULA COP9 signalosome complex subunit 12 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=CSN12 PE=3 SV=1
Length = 424
Score = 68.9 bits (167), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 153/346 (44%), Gaps = 59/346 (17%)
Query: 113 SAWALEALYVIAYEIRVLAERADRELASNGKSPEK----------LKAAGSFLMKVFGVL 162
+ W E LY ++ +A + D E+ + PE L AG + +
Sbjct: 89 TNWMTELLYQSGEQLYAIANKLD-EIQNKLDGPEDTGDGDEEESYLIQAGRVMHMTLNIC 147
Query: 163 AGKGSKRV------GALYLTCQLFKIYFKLGTVHLCRSVIRSIETARIFDFEEF-PKRDK 215
++RV G Y+ LFK+Y ++ L ++ + E+ F E P +
Sbjct: 148 FKDRNERVDENRKIGVFYIGTLLFKLYNRIKAYGLLNNMCKVFES----HFNEIGPYLSR 203
Query: 216 VT-------YMYYTGRLEVFNEN-----FPAADQKLSYALINCNPQSEANIR-MILKYLI 262
+ + +Y G + +N F + + + S +R +L YLI
Sbjct: 204 INNDLIVIRFKFYMGLYYGYEKNNYALGFKWLQETFDICTLYESIPSTYKVRSQVLIYLI 263
Query: 263 PVK-LSIGILPKDWLLEK-YNLVE--YSNIVQALRRGDLRLLRHALEEHEDQFLRSGVYL 318
P++ L + P+ L + Y V Y+ +V++L G+L+L +E++E ++ +Y+
Sbjct: 264 PMRILHLRHYPRLAPLRRTYPSVAKIYTMLVKSLCTGNLKLYEKFIEDNEFYLVKRNLYV 323
Query: 319 VLEKLELQVYQRLFKKIYIIQKQKDPSKAHQMKLDVIVKALKW-------------LEMD 365
+ K++ V +L KK +I+ ++ LD++ KA + D
Sbjct: 324 TVLKMKELVELKLVKKAWILN-----GGNTKVPLDMLAKAFQISRGTPCHVTENVAPNHD 378
Query: 366 MDVDEVECIVAILIHKNLVKGYFAHKSKVVVLSKQDPFPKLNGKPV 411
++DE+ECI+A LI KN +KGY +H +V++ SK PFP L KP+
Sbjct: 379 QELDELECILATLISKNYIKGYLSHSHRVMMTSKT-PFPGL-AKPL 422
>sp|P47130|CSN12_YEAST Cop9 signalosome complex subunit 12 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CSN12 PE=1 SV=1
Length = 423
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 141/335 (42%), Gaps = 56/335 (16%)
Query: 112 ESAWALEALYVIAYEIRVLAERADRELASNGKSPEKLKAAGSFLMKVFGVLAG------K 165
E+ W + L+V+A ++ LA S+ + + ++ G + + F +
Sbjct: 100 ETNWIIYPLWVMAKQLIRLANE------SSELNKDSIEECGRTIHRSFTICLNDRNPRLN 153
Query: 166 GSKRVGALYLTCQLFKIYFKLGTVHLCRSVIRSIETARIFDFEEFPKRDK---------- 215
+K++G F IY +L + +++++ +E+ + + P +K
Sbjct: 154 ENKKIGCYMFANLEFSIYHRLSNKDMIKNLVKVLESR--VNARDIPPLNKSLAMEHKSQV 211
Query: 216 VTYMYYTGRLEVFNEN-FPAADQKLSYALINCNPQS----------EANIRMILKYLIPV 264
V Y YY G+ EN L+ AL+ C P + + I+ L+P+
Sbjct: 212 VLYNYYLGQYYGCLENDHERGFFHLNEALLQC-PMLYVESTGKFVLQGQMEKIMILLVPL 270
Query: 265 KLSIGILPKDW--------LLEKYNLVE-YSNIVQALRRGDLRLLRHALEEHEDQFLRSG 315
L L W + L + Y +V+++ G+L L HE FL G
Sbjct: 271 ALLTKRLYPHWDHPVIAGVITRSKRLSQVYPTLVRSVISGNLSLYEATAASHERFFLSQG 330
Query: 316 VYLVLEKLELQVYQRLFKKIYIIQKQKDPSKAHQMKLDVIVKALKWLEMDMDVDE----- 370
+++V+ L V+ RL ++ + Q + M L +++ A K + + DE
Sbjct: 331 LHVVITLLREVVFTRLVQRCW----QWGNDRKSIMPLKILL-ATKQHDSSANEDEEEQLD 385
Query: 371 -VECIVAILIHKNLVKGYFAHKSKVVVLSKQDPFP 404
+EC +A I L++ Y +H ++ +V SK++PFP
Sbjct: 386 ALECRLASAIASGLLRAYLSHSNRCIVFSKKEPFP 420
>sp|Q6FJ48|CSN12_CANGA COP9 signalosome complex subunit 12 OS=Candida glabrata (strain
ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=CSN12 PE=3 SV=1
Length = 449
Score = 52.0 bits (123), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 60/136 (44%), Gaps = 26/136 (19%)
Query: 290 QALRRGDLRLLRHALEEHEDQFLRSGVYLVLEKLELQVYQRLFKKIYIIQKQKDPSKAHQ 349
+ + GD + ++EH Q+L G Y + ++ V+ RL K Y + +K
Sbjct: 316 KCYKNGDTIVFDELIKEHAAQYLIDGTYSAMLLIKELVFLRLVKVCYKVNDKKSI----- 370
Query: 350 MKLDVIVKALKWLEMDMD---------------------VDEVECIVAILIHKNLVKGYF 388
+ LD+I + + D +DE+EC +A LI +KGY
Sbjct: 371 LPLDLIAAGYRIHFRNHDNEENRVTTTNPRKLQKKNEDLLDELECRIANLIANGRIKGYL 430
Query: 389 AHKSKVVVLSKQDPFP 404
+H + +VLSK +PFP
Sbjct: 431 SHSQRCMVLSKTEPFP 446
>sp|Q08231|THP1_YEAST Nuclear mRNA export protein THP1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=THP1 PE=1 SV=1
Length = 455
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 89/183 (48%), Gaps = 15/183 (8%)
Query: 166 GSKRVGALYLTCQLFKIYFKLGTVHLCRSVIRSIETARIF-DFEEFPKRDKVTYMYYTGR 224
G +R+ LYL +L IYF++ + LC ++ ++ + + F E+ ++ Y Y GR
Sbjct: 170 GKQRI-LLYLVNKLNNIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQLDQQIEYRYLLGR 228
Query: 225 LEVFNENFPAADQKLSYA---LINCNPQSEA---NIRMILKYLIPVKLSIGILPKDW--- 275
+ N A + + A L+N ++A N IL Y+IP L +G + K W
Sbjct: 229 YYLLNSQVHNAFVQFNEAFQSLLNLPLTNQAITRNGTRILNYMIPTGLILGKMVK-WGPL 287
Query: 276 --LLEKYNLVEYSNIVQALRRGDLRLLRHALEEHEDQFL-RSGVYLVLEKLELQVYQRLF 332
L + + +S + + +R G+++ + L ++E R + ++LEKL + Y+ L
Sbjct: 288 RPFLSQETIDNWSVLYKHVRYGNIQGVSLWLRQNERHLCARQLLIVLLEKLPMVTYRNLI 347
Query: 333 KKI 335
K +
Sbjct: 348 KTV 350
>sp|P14685|PSMD3_MOUSE 26S proteasome non-ATPase regulatory subunit 3 OS=Mus musculus
GN=Psmd3 PE=1 SV=3
Length = 530
Score = 45.1 bits (105), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 86/197 (43%), Gaps = 24/197 (12%)
Query: 218 YMYYTGRLEVFNENFPAADQKLSYALINCNPQSEANIRMIL-KYLIPVKLSIGILPKDWL 276
Y+YYTGR++ + A + ++ AL + + + K LI V+L +G +P
Sbjct: 284 YLYYTGRIKAIQLEYSEARRTMTNALRKAPQHTAVGFKQTVHKLLIVVELLLGEIPDRLQ 343
Query: 277 LE----KYNLVEYSNIVQALRRGDLRLLRHALEEHEDQFLRSGVYLVLEKLELQVYQRLF 332
K +L+ Y + QA+R G+L L++ ++F G Y ++ +L V +
Sbjct: 344 FRQPSLKRSLMPYFLLTQAVRTGNLAKFNQVLDQFGEKFQTDGTYTLIIRLRHNVIKTGV 403
Query: 333 KKIYIIQKQKDPSKAHQMKLDVIVKALKWLEMDMDVDEVECIVAILIHKNLV-------K 385
+ I + S + D+ K L++D D E IVA I ++ K
Sbjct: 404 RMISL-------SYSRISLADIAQK----LQLDSPED-AEFIVAKAIRDGVIEASINHEK 451
Query: 386 GYFAHKSKVVVLSKQDP 402
GY K + + S ++P
Sbjct: 452 GYVQSKEMIDIYSTREP 468
>sp|O43242|PSMD3_HUMAN 26S proteasome non-ATPase regulatory subunit 3 OS=Homo sapiens
GN=PSMD3 PE=1 SV=2
Length = 534
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 86/197 (43%), Gaps = 24/197 (12%)
Query: 218 YMYYTGRLEVFNENFPAADQKLSYALINCNPQSEANIRMIL-KYLIPVKLSIGILPKDWL 276
Y+YYTGR++ + A + ++ AL + + + K LI V+L +G +P
Sbjct: 288 YLYYTGRIKAIQLEYSEARRTMTNALRKAPQHTAVGFKQTVHKLLIVVELLLGEIPDRLQ 347
Query: 277 LE----KYNLVEYSNIVQALRRGDLRLLRHALEEHEDQFLRSGVYLVLEKLELQVYQRLF 332
K +L+ Y + QA+R G+L L++ ++F G Y ++ +L V +
Sbjct: 348 FRQPSLKRSLMPYFLLTQAVRTGNLAKFNQVLDQFGEKFQADGTYTLIIRLRHNVIKTGV 407
Query: 333 KKIYIIQKQKDPSKAHQMKLDVIVKALKWLEMDMDVDEVECIVAILIHKNLV-------K 385
+ I + S + D+ K L++D D E IVA I ++ K
Sbjct: 408 RMISL-------SYSRISLADIAQK----LQLDSPED-AEFIVAKAIRDGVIEASINHEK 455
Query: 386 GYFAHKSKVVVLSKQDP 402
GY K + + S ++P
Sbjct: 456 GYVQSKEMIDIYSTREP 472
>sp|Q2KJ46|PSMD3_BOVIN 26S proteasome non-ATPase regulatory subunit 3 OS=Bos taurus
GN=PSMD3 PE=2 SV=1
Length = 534
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 86/197 (43%), Gaps = 24/197 (12%)
Query: 218 YMYYTGRLEVFNENFPAADQKLSYALINCNPQSEANIRMIL-KYLIPVKLSIGILPKDWL 276
Y+YYTGR++ + A + ++ AL + + + K LI V+L +G +P
Sbjct: 288 YLYYTGRIKAIQLEYSEARRTMTNALRKAPQHTAVGFKQTVHKLLIVVELLLGEIPDRLQ 347
Query: 277 LE----KYNLVEYSNIVQALRRGDLRLLRHALEEHEDQFLRSGVYLVLEKLELQVYQRLF 332
K +L+ Y + QA+R G+L L++ ++F G Y ++ +L V +
Sbjct: 348 FRQPSLKRSLMPYFLLTQAVRTGNLAKFNQVLDQFGEKFQADGTYTLIIRLRHNVIKTGV 407
Query: 333 KKIYIIQKQKDPSKAHQMKLDVIVKALKWLEMDMDVDEVECIVAILIHKNLV-------K 385
+ I + S + D+ K L++D D E IVA I ++ K
Sbjct: 408 RMISL-------SYSRISLADIAQK----LQLDSPED-AEFIVAKAIRDGVIEASINHEK 455
Query: 386 GYFAHKSKVVVLSKQDP 402
GY K + + S ++P
Sbjct: 456 GYVQSKEMIDIYSTREP 472
>sp|Q9U5Z8|PSMD3_ANOST Probable 26S proteasome non-ATPase regulatory subunit 3
OS=Anopheles stephensi GN=DOXA2 PE=3 SV=1
Length = 500
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 85/198 (42%), Gaps = 26/198 (13%)
Query: 218 YMYYTGRLEVFNENFPAADQKLSYALINCNPQSEANIR-MILKYLIPVKLSIGILPKDWL 276
++YY GR++ + A ++L AL Q+ R + K +I V+L +G +P+ +
Sbjct: 255 FLYYLGRIKAAKLEYSVAHKQLVQALRKAPQQAAVGFRQTVQKLVIVVELLLGDIPERKV 314
Query: 277 LE----KYNLVEYSNIVQALRRGDLRLLRHALEEHEDQFLRSGVYLVLEKLELQVYQRLF 332
+ +L Y + QA+R G+L+ LE +QF + + ++ +L V +
Sbjct: 315 FRQAALRRSLGPYFQLTQAVRMGNLQRFGEVLENFGEQFRQDHTFTLIIRLRHNVIKTAI 374
Query: 333 KKIYIIQKQKDPSK-AHQMKLDVIVKALKWLEMDMDVDEVECIVAILIHKNLV------- 384
+ I + + P A ++ LD ++ E IVA I ++
Sbjct: 375 RSIGLAYSRISPQDIARKLGLD-------------SPEDAEFIVAKAIRDGVIDATLDPE 421
Query: 385 KGYFAHKSKVVVLSKQDP 402
KGY K + S ++P
Sbjct: 422 KGYMRTKESTDIYSTREP 439
>sp|Q1ZXD3|PSMD3_DICDI 26S proteasome non-ATPase regulatory subunit 3 OS=Dictyostelium
discoideum GN=psmD3 PE=1 SV=1
Length = 504
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 84/199 (42%), Gaps = 25/199 (12%)
Query: 218 YMYYTGRLEVFNENFPAADQKLSYALINCNPQSEAN--IRMILKYLIPVKLSIGILPKDW 275
Y YY GR+ + + + L+ A I PQ+ A R + K L V+L +G +P+
Sbjct: 256 YFYYQGRIRAIQLEYAESFKFLTQA-IRKAPQNTAGGFRRTVYKLLSIVQLLMGEIPERN 314
Query: 276 LLE----KYNLVEYSNIVQALRRGDLRLLRHALEEHEDQFLRSGVYLVLEKLELQVYQRL 331
K L Y ++ +A+R GDL ALE++ D F + ++++L V +
Sbjct: 315 TFSQKQLKIALKPYFHLTEAVRVGDLGSFNQALEQNSDIFKSDQTFTLVQRLRSNVIKAG 374
Query: 332 FKKIYIIQKQKDPSKAHQMKLDVIVKALKWLEMDMDVDEVECIVAILIHKNLVK------ 385
KK+ + ++ + I LK+ D ++ I+A I ++
Sbjct: 375 LKKL--------NTAYSRISFNDICTKLKF---DGTTQDIMFIIAKTIKDGVIDATINYE 423
Query: 386 -GYFAHKSKVVVLSKQDPF 403
GY + + S Q+P
Sbjct: 424 GGYLQSRENIDAYSTQEPL 442
>sp|O42897|RPN3_SCHPO Probable 26S proteasome regulatory subunit rpn3
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=rpn3 PE=3 SV=2
Length = 497
Score = 42.0 bits (97), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 10/120 (8%)
Query: 216 VTYMYYTGRLEVFNENFPAADQKLSYALINCNPQSEANIRM---ILKYLIPVKLSIGILP 272
+ Y YY GR+ ++ A + L A I P + ++ + K I V+L +G +P
Sbjct: 248 IRYQYYLGRIRAIQLDYTTAHEHLVSA-IRKAPNTVYAVQFLEAVYKLHIVVQLLMGEIP 306
Query: 273 KDWL-----LEKYNLVEYSNIVQALRRGDLRLLRHALEEHEDQFLRSGVYLVLEKLELQV 327
+ + LEK LV Y I QA+R GDL AL ++E +F G+Y ++ +L V
Sbjct: 307 ERRIFRQKSLEK-TLVPYLRISQAVRIGDLCAFTDALSKYEAEFRFDGLYTLICRLRHTV 365
>sp|O61470|PSMD3_ANOGA Probable 26S proteasome non-ATPase regulatory subunit 3
OS=Anopheles gambiae GN=Dox-A2 PE=3 SV=2
Length = 496
Score = 41.6 bits (96), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 84/198 (42%), Gaps = 26/198 (13%)
Query: 218 YMYYTGRLEVFNENFPAADQKLSYALINCNPQSEANIR-MILKYLIPVKLSIGILPKDWL 276
++YY GR++ + A ++L AL Q+ R + K +I V+L +G +P+ +
Sbjct: 251 FLYYLGRIKAAKLEYSVAHKQLVQALRKAPQQAAVGFRQTVQKLVIVVELLLGDIPERKV 310
Query: 277 LE----KYNLVEYSNIVQALRRGDLRLLRHALEEHEDQFLRSGVYLVLEKLELQVYQRLF 332
+ +L Y + QA+R G+L+ L +QF + + ++ +L V +
Sbjct: 311 FRQAALRRSLGPYFQLTQAVRMGNLQRFGEVLVNFGEQFRQDHTFTLIIRLRHNVIKTAI 370
Query: 333 KKIYIIQKQKDPSK-AHQMKLDVIVKALKWLEMDMDVDEVECIVAILIHKNLV------- 384
+ I + + P A ++ LD ++ E IVA I ++
Sbjct: 371 RSIGLAYSRISPQDIARKLGLD-------------SPEDAEFIVAKAIRDGVIEATLDPE 417
Query: 385 KGYFAHKSKVVVLSKQDP 402
KGY K + S ++P
Sbjct: 418 KGYMRSKESTDIYSTREP 435
>sp|Q9LNU4|PSD31_ARATH Probable 26S proteasome non-ATPase regulatory subunit 3a
OS=Arabidopsis thaliana GN=EMB2719 PE=1 SV=3
Length = 488
Score = 38.1 bits (87), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 81/195 (41%), Gaps = 15/195 (7%)
Query: 207 FEEFPKRDKVTYMYYTGRLEVFNENFPAADQKLSYALINCNPQSEANIRMIL-KYLIPVK 265
FE + Y++Y G++ + A + L A P + R+ K+ I V+
Sbjct: 231 FEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKA-PIAALGFRIQCNKWAILVR 289
Query: 266 LSIGILPKDWLLEKYNLVE----YSNIVQALRRGDLRLLRHALEEHEDQFLRSGVYLVLE 321
L +G +P+ + + + + Y + A+R GDL L R E+ D F + + ++
Sbjct: 290 LLLGEIPERSIFTQKGMEKALRPYFELTNAVRIGDLELFRTVQEKFLDTFAQDRTHNLIV 349
Query: 322 KLELQVYQRLFKKIYIIQKQKDPSKAHQMKLDVIVKALKWLEMDMDVDEVECIVAILIHK 381
+L V + + I I ++ L + K L+ L + V + E IVA I
Sbjct: 350 RLRHNVIRTGLRNISI--------SYSRISLPDVAKKLR-LNSENPVADAESIVAKAIRD 400
Query: 382 NLVKGYFAHKSKVVV 396
+ HK+ +V
Sbjct: 401 GAIDATIDHKNGCMV 415
>sp|Q8SRT7|RPN3_ENCCU 26S proteasome regulatory subunit RPN3 OS=Encephalitozoon cuniculi
(strain GB-M1) GN=RPN3 PE=1 SV=1
Length = 376
Score = 37.7 bits (86), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 47/105 (44%), Gaps = 13/105 (12%)
Query: 285 YSNIVQALRRGDLRLLRHALEEHEDQFLRSGVYLVLEKLELQVYQRLFKKIYIIQKQKDP 344
Y + A++R D++ LE ++D+ + G+Y V ++L V Q +KI ++ +
Sbjct: 232 YFKLASAVKRADIKKFEETLESNKDELMSQGLYFVAKRLSQNVIQEGIRKISVVYSRISY 291
Query: 345 SKAHQMKLDVIVKALKWLEMDMDVDEVECIVAILIHKNLVKGYFA 389
+ + ++ EVE +V I K L+KG A
Sbjct: 292 EDIAHI-------------LGINSGEVEYLVKRTIRKGLIKGKVA 323
>sp|Q5D7H7|TRIM5_LAGLA Tripartite motif-containing protein 5 OS=Lagothrix lagotricha
GN=TRIM5 PE=3 SV=1
Length = 547
Score = 35.4 bits (80), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 49 ADSLNVFQDANRLIKQSDNY--SPFADITVPLFRSLQHYRTGNLVD 92
AD+ N FQDA + D +PFA + VPLF +++ R G +D
Sbjct: 452 ADNYNAFQDAGKYSDFQDGSCSTPFAPLIVPLFMTIRPKRVGVFLD 497
>sp|Q04908|PSMD3_CAEEL 26S proteasome non-ATPase regulatory subunit 3 OS=Caenorhabditis
elegans GN=rpn-3 PE=1 SV=1
Length = 504
Score = 33.5 bits (75), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 27/127 (21%), Positives = 54/127 (42%), Gaps = 5/127 (3%)
Query: 214 DKVTYMYYTGRLEVFNENFPAADQKLSYALINCNPQSEANIRM-ILKYLIPVKLSIGILP 272
D YMYY GR++ ++ +A A + + + K+++ + L G +P
Sbjct: 252 DLARYMYYQGRIKALQLDYNSAAGYFLQAQRKAPQEGAIGFKQAVQKWVVVIGLLQGEIP 311
Query: 273 KDWLLE----KYNLVEYSNIVQALRRGDLRLLRHALEEHEDQFLRSGVYLVLEKLELQVY 328
+ + L Y ++ + +R GD+ H LE+ + QF ++ +L V
Sbjct: 312 DRSVFRQPIYRKCLAHYLDLSRGVRDGDVARFNHNLEQFKTQFEADDTLTLIVRLRQNVI 371
Query: 329 QRLFKKI 335
+ K+I
Sbjct: 372 KTAIKQI 378
>sp|B2U9R2|SYE_RALPJ Glutamate--tRNA ligase OS=Ralstonia pickettii (strain 12J) GN=gltX
PE=3 SV=1
Length = 465
Score = 32.7 bits (73), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 36/66 (54%), Gaps = 10/66 (15%)
Query: 328 YQRLFKKIYIIQ-KQKDPSKAHQMKLDVIVKALKWLEMDMD---------VDEVECIVAI 377
+ R K +I++ + D ++ Q +DVI++A+ WL+MD+D +D +VA
Sbjct: 31 FARKMKGDFILRIEDTDVERSSQEAVDVILEAMDWLDMDIDEGPFYQMQRMDRYRAVVAQ 90
Query: 378 LIHKNL 383
++ + L
Sbjct: 91 MVQQEL 96
>sp|P25161|PSMD3_DROME Probable 26S proteasome non-ATPase regulatory subunit 3
OS=Drosophila melanogaster GN=Rpn3 PE=2 SV=1
Length = 494
Score = 32.0 bits (71), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 56/123 (45%), Gaps = 5/123 (4%)
Query: 218 YMYYTGRLEVFNENFPAADQKLSYALINCNPQSEANIR-MILKYLIPVKLSIGILPKDWL 276
++YY GR++ + A + L AL + R + K +I V+L +G +P+ +
Sbjct: 249 FLYYLGRIKAAKLEYSDAHKHLVQALRKSPQHAAIGFRQTVQKLIIVVELLLGNIPERVV 308
Query: 277 LEKYNLVE----YSNIVQALRRGDLRLLRHALEEHEDQFLRSGVYLVLEKLELQVYQRLF 332
+ L + Y + QA+R G+L+ + ++ +F + ++ +L V +
Sbjct: 309 FRQAGLRQSLGAYFQLTQAVRLGNLKRFGDVVSQYGPKFQLDHTFTLIIRLRHNVIKTAI 368
Query: 333 KKI 335
+ I
Sbjct: 369 RSI 371
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.137 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 144,403,295
Number of Sequences: 539616
Number of extensions: 5818836
Number of successful extensions: 14087
Number of sequences better than 100.0: 48
Number of HSP's better than 100.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 13969
Number of HSP's gapped (non-prelim): 51
length of query: 413
length of database: 191,569,459
effective HSP length: 120
effective length of query: 293
effective length of database: 126,815,539
effective search space: 37156952927
effective search space used: 37156952927
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)